LOCUS       DATIFF010000001         2309 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1538661, whole genome shotgun sequence.
ACCESSION   DATIFF010000001 DATIFF010000000
VERSION     DATIFF010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2309
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1538661"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2147
                     /gene="ppdK"
                     /locus_tag="VLD58_00005"
     CDS             <1..2147
                     /gene="ppdK"
                     /locus_tag="VLD58_00005"
                     /EC_number="2.7.9.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050242 - pyruvate, phosphate dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0015976 - carbon utilization [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
                     /protein_id="HSB52698.1"
                     /translation="RDIDLPVAEMQAVVQRFKQHVRGETGHNFPEDPMDQLWGAIAAV
                     FESWNTRRAIDYRKLHDIPDSMGTAVNVVAMVFGNLGEDSGTGVTFSRDPSTGERVLY
                     GEFLLNAQGEDVVSGSRTPLHIAALKDQLPHTHQELERVARTLERHFRDVQDMEFTVE
                     RGVLYMLQTRRGQRSGQAAVRIACDMVDEGLISEEEAVARIPPNDLNQLLHPTIDAHS
                     QLDLLTTGLPASPGAACGTAVFDADRAEKLGRAGQAVILVRRETSPEDFHGMVVAKAI
                     LTARGGMTSHAAVVARGMGKPCVAGAQELSVDEKANRFAVNGRSIAEGDWITVDGSTG
                     KVFAGQAALIAPEMSGNFLRLMQWADRIRQLRVRVNADTPADAHRGRDFGAEGIGLCR
                     TEHMFFDGERLTAMREMIVAQDHEGRERALAKLLPMQRSDFEAIFRAMEGFPVTIRLL
                     DPPLHEFLPKERSEIDGLARDLEIPVDQLQAVIDRLAEVNPMLGLRGCRLGIIYPEIT
                     AMQVRAIFEAACTVASRKGRVMPEVMIPLTASVVEFRKQALIVRQVAEEVFRERQITV
                     PFLLGTMIELPRACVTADELAREAQFFSFGTNDLTQTTWGLSRDDAGHFLPYYLENGV
                     IENDPFQVLDQAGVGKLIQMACDLGRRIRPDLKLGICGEHGGEPGAVAFCDRLGMNYV
                     SCSPFRIPIARLAGAQAALAARGTMDRTRATV"
BASE COUNT          355 a          804 c          820 g          330 t
ORIGIN      
        1 agcgcgacat cgaccttccc gtggcggaga tgcaggcggt ggtccagcgt ttcaagcagc
       61 acgtccgcgg cgagacgggg cacaacttcc ccgaagaccc gatggaccag ctctggggcg
      121 ccatcgccgc cgtgttcgag agctggaaca cccgccgggc catcgactac cggaagctgc
      181 acgacattcc cgacagcatg ggcacggcgg tcaacgtggt cgccatggtg ttcggcaacc
      241 tgggcgagga ctcgggcacc ggcgtcacct tcagtcggga tccctcgacc ggcgagcggg
      301 tgctctacgg cgagttcctg ctcaacgcgc agggcgagga cgtggtgagc gggagccgga
      361 ccccgctcca catcgccgcg ctcaaggacc agctccccca cacccaccag gagctcgagc
      421 gggtggcgcg gaccctggag cgccacttcc gcgacgtgca ggacatggag ttcacggtgg
      481 agcggggcgt gctctacatg ctccagaccc ggcggggcca gcgctccggc caggccgcgg
      541 tgcggatcgc ctgcgacatg gtggacgagg gcctcatctc cgaggaggag gcggtggcgc
      601 ggatcccgcc caacgacctc aaccaactcc tccatcccac catcgatgcc cacagccagc
      661 tcgacctgct gaccactggt ctgccggcct cgcccggcgc ggcctgcggc accgcggtgt
      721 tcgacgccga tcgggccgag aagctgggcc gggcgggcca ggcggtcatc ctggtgcggc
      781 gggagacctc acccgaggac ttccacggta tggtggtggc caaggcgatc ctcaccgcgc
      841 ggggcgggat gacctcccac gccgcggtgg tggcccgggg gatgggcaag ccctgcgtgg
      901 cgggggccca ggaactctcg gtggacgaga aggccaaccg cttcgccgtc aacggccgca
      961 gcatcgccga gggcgactgg atcaccgtgg acggcagcac cgggaaggtg ttcgccgggc
     1021 aggcggcgct gatcgcgccg gagatgagcg gcaacttcct ccggctgatg cagtgggccg
     1081 accggatccg ccagctccgg gtgcgggtca acgccgacac gcccgccgac gcgcaccggg
     1141 gccgcgactt cggggccgag gggatcgggc tctgccggac cgagcacatg ttcttcgacg
     1201 gcgagcggct caccgccatg cgggagatga tcgtcgccca ggatcacgag ggccgggagc
     1261 gcgcgctggc caagctgctg ccgatgcaac gctccgactt cgaagcgatc ttccgcgcga
     1321 tggagggctt ccccgtcacc atccggctgc tcgatccccc gctgcacgag ttcctgccca
     1381 aggagcgctc cgaaatcgac ggcctggcgc gcgacctgga gattccggtg gatcagctcc
     1441 aggcggtgat cgaccgcctg gccgaggtga atccgatgct cggcctgcgt ggctgccggc
     1501 tggggatcat ctaccccgag atcaccgcga tgcaggtccg ggccatcttc gaggcggcct
     1561 gcaccgtggc cagccgcaag ggccgggtga tgccggaggt gatgatcccg ctcaccgcca
     1621 gcgtcgtcga attccggaag caggcgctga tcgtgcggca ggtggcggag gaagtgttcc
     1681 gcgagcgcca gatcacggtg ccgttcctgc tcggcaccat gatcgagctg ccccgggcct
     1741 gcgtcaccgc cgacgagctg gcccgcgagg cccagttctt ctccttcggg accaacgatc
     1801 tcacccagac cacctggggc ctttcccggg acgacgccgg gcacttcctc ccttactacc
     1861 tggagaacgg ggtgatcgag aacgatccct tccaggttct ggaccaggcc ggcgtcggga
     1921 agctgatcca gatggcgtgc gacctcggcc gccgtatccg gcccgatctc aagctgggga
     1981 tctgcggcga gcacgggggc gagccggggg cggtggcctt ctgcgaccgg ctggggatga
     2041 actacgtctc ctgctcccct ttccggatcc cgatcgcccg cctggctggc gcccaggccg
     2101 cgctggccgc ccgcgggacg atggaccgca cccgggcgac cgtttaggca cccgggtccg
     2161 ggggggggtc cccggggcgc cgggcctcga gccgcgcggc gcaggcggaa cagaggccag
     2221 cgacgccggg gccgctcctc cgcaattcgg gtgggatcgt tcgcccgatc gggcaatcct
     2281 cactgatgtg atatgtccca tccaggatg
//
LOCUS       DATIFF010000002         1330 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2000455, whole genome shotgun sequence.
ACCESSION   DATIFF010000002 DATIFF010000000
VERSION     DATIFF010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1330
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2000455"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..810
                     /locus_tag="VLD58_00010"
     CDS             <1..810
                     /locus_tag="VLD58_00010"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018003165.1"
                     /note="produces ATP from ADP in the presence of a proton
                     gradient across the membrane; the alpha chain is a
                     catalytic subunit; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HSB52699.1"
                     /translation="GEYYRDTGKHALVIYDDLSKHAQAYRQLALLLRRPPGREAYPGD
                     VFYLHSRLLERAAKINENAETVKLDPRIKKPGGSLTALPIIETQAGDVSAYIPTNVIS
                     ITDGQIFLTTDLFFANVRPAVDAGISVSRVGGNAQIKAMKQVAGPLRLSLAQFRELEA
                     FAQFGSDLDPATQKQLARGSRLVEVLKQPQYQPVPVEKQVAIIYAVTNGFLDDVEIKH
                     IRQWERDFIDFLEASHPAVLSDIRTKKALDDDITGRLKAAISAFKSTFVAQ"
     gene            811..>1330
                     /locus_tag="VLD58_00015"
     CDS             811..>1330
                     /locus_tag="VLD58_00015"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF012456.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HSB52700.1"
                     /translation="MAKGRQLKGRIRSVQNTRKITRTMELVSTSKLKRAQDRVVAARP
                     YAQALREVLADLVTPELAERFPLLRRPAPPSKGGPTRAAVILLTSNRGLAGAFNSNLI
                     KEARRRVEALEAEGYTVELHGVGKKGIGFFKYLGRKWTLERTDIGDKPTAEHAAEIAQ
                     PLIDAYSAGELAS"
BASE COUNT          236 a          470 c          436 g          188 t
ORIGIN      
        1 ggcgaatact atcgcgacac cggcaaacat gcgctggtga tttacgatga cctttccaag
       61 cacgcccagg cctaccgtca attggccctg ctgctgcggc gcccgccggg ccgcgaggcg
      121 tacccgggcg acgtgttcta tctccacagc cgtctgctgg agcgggccgc caagatcaac
      181 gagaacgccg agacggtgaa gctcgatccc cgcatcaaga agccgggcgg gtcgctcacc
      241 gcgctcccga tcatcgaaac ccaggccggc gacgtttcgg cctacatccc gaccaacgtc
      301 atctcgatca ccgacggcca gatcttcctc acgaccgacc tgttcttcgc gaatgtgcgc
      361 ccggcggtgg acgccggcat cagcgtgagc cgggtgggcg gcaacgccca gatcaaggcg
      421 atgaagcagg tggccggccc gctccggctc tcgctggccc agttccgcga gctggaggcg
      481 ttcgcccagt tcggctccga cctcgacccg gccacccaga agcagctggc ccggggctcc
      541 cggctggtgg aggtgctgaa gcagccgcag taccagccgg tgccggtgga gaagcaggtg
      601 gccatcatct acgcggtcac caacggcttc ctcgacgacg tggagatcaa gcacatccgg
      661 cagtgggagc gcgacttcat cgatttcctc gaggcctccc atccggcggt gctcagcgac
      721 atccggacca agaaggcgct cgacgacgac atcaccggcc ggctcaaggc cgccatctcg
      781 gccttcaagt ccaccttcgt ggctcaatag atggccaagg gacgccagct caagggacgg
      841 atccggtccg tccagaacac ccgcaagatc acccggacga tggagctggt ctccacgtcc
      901 aagctcaagc gggcccagga ccgggtggtc gcggcccggc cctacgccca ggcgctccgc
      961 gaggtgctgg ccgacctggt gacgccggag ctggccgagc gctttccgct gctccggcgc
     1021 ccggcgcccc cgtcgaaggg cggccccacc cgggccgcgg tcatcctgct cacctccaac
     1081 cgcggcttgg ccggggcatt caactcgaac ctgatcaagg aagcccggcg ccgggtcgag
     1141 gcgctggagg cggagggcta caccgtcgag ctgcacggcg tgggcaagaa ggggatcggc
     1201 ttcttcaagt acctcgggcg gaagtggacg ctggagcgga ccgacatcgg cgacaagccg
     1261 acggcggagc acgccgccga gatcgcccag ccgctgatcg acgcgtattc ggccggggag
     1321 ctcgccagcg
//
LOCUS       DATIFF010000003         1185 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2000479, whole genome shotgun sequence.
ACCESSION   DATIFF010000003 DATIFF010000000
VERSION     DATIFF010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2000479"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(35..>1185)
                     /locus_tag="VLD58_00020"
     CDS             complement(35..>1185)
                     /locus_tag="VLD58_00020"
                     /inference="COORDINATES: protein motif:HMM:TIGR02669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SpoIID/LytB domain-containing protein"
                     /protein_id="HSB52701.1"
                     /translation="PAPEIRIGLVIGAGKVDIAGDSGLTILDADSTPAGEAGAGSVWT
                     IRPQGGALAGGAPGGWRLANQIALTFTPRTPAGLLLVNGRPYRGRVSVVRDRSGVTAI
                     NVVDLESYLLGVVPAEMGRRDPSEVEALAAQAVISRTFAIRNLGKRATEGFDLYGTVV
                     DQVYGGVGAENALTTGAVVRTAGQILTWQGTPIDAFFFSTCGGRTADGTEVFAGADRP
                     YLRSIRDLDDLGRPWCQISPRYQWREEWSAEQLRSTLRQSLPPATGTPAEEAGTVSGV
                     AVTARTGSDRVASVTVQLRGGPVEVRGPAVRQVLRPAGEALLRSALFRLSEVRGEGHL
                     LRLVADGNGAGHGVGFCQWGAVGRARGGQDAFTILSAYFPGTTLSRAY"
BASE COUNT          189 a          442 c          380 g          174 t
ORIGIN      
        1 atcgggtcgg acatgaatcc ccctgccgaa aaggctagta agcgcgactg agcgtcgtgc
       61 cgggaaagta ggcggataag atggtgaacg catcctgccc cccgcgggcc cggcccaccg
      121 ctccccactg gcagaacccc actccatgcc cggccccgtt accatcggcc accagccgga
      181 gcaggtggcc ttcccctcgg acttccgaga gccggaacaa cgcgctacgg agcaacgcct
      241 cgccggccgg ccgaagcacc tgtcgcaccg ccggcccgcg cacttccacc ggtccgccgc
      301 ggagctgcac cgtcacgctc gctacccgat ccgaacccgt gcgggccgtt acggcgaccc
      361 cagaaacggt gcctgcctct tccgccgggg ttccggtcgc gggcggcagc gactggcgga
      421 gagtgctccg gagctgctcc gcgctccact cctcccgcca ttggtagcgg ggggagatct
      481 ggcaccaggg tcggcccagg tcatcgagat cgcgaatgga tctcaggtac ggccggtcgg
      541 cgccggcgaa gacctcggtg ccatcggccg tccggccgcc gcaggtcgag aagaagaagg
      601 cgtcgatggg ggtgccctgc caggtcagga tctgtcctgc cgtccgcacg accgccccgg
      661 tcgtcagggc attctcggca ccgactccgc catagacctg gtcgaccacc gttccgtaga
      721 gatcaaaccc ctcggtcgcg cgcttaccga gattcctgat ggcaaaggtc cgggagatca
      781 cggcctgtgc ggccagcgct tccacctccg acgggtcgcg ccggcccatt tccgccggca
      841 caactcccag cagatatgat tcgagatcca ccacgttgat ggccgtgacg cccgatcggt
      901 cgcgaaccac gcttacccgc ccccggtagg ggcgtccgtt caccagcagg agcccggcgg
      961 gcgtgcgtgg cgtgaaggtg agcgcgatct ggttggcgag ccgccatccg ccgggagctc
     1021 ctcccgcgag ggcgccaccc tggggccgga tggtccagac cgatcccgca ccggcctctc
     1081 cggcgggagt gctgtccgca tcgagaatcg tgagtccact gtcgcccgcg atatcgacct
     1141 tgcccgctcc gatcacgagc ccgatccgga tctccggcgc cggcc
//
LOCUS       DATIFF010000004         3701 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2000664, whole genome shotgun sequence.
ACCESSION   DATIFF010000004 DATIFF010000000
VERSION     DATIFF010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3701
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2000664"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..647)
                     /locus_tag="VLD58_00025"
     CDS             complement(<1..647)
                     /locus_tag="VLD58_00025"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB52702.1"
                     /translation="MAWLPDREIYGPERPTVRDVEPLNRVFSEAFTDRYRRDGMTGVR
                     VPYLNPAIWRYALEDAGDGAMVWRDPDGELCGFNMVHLSGREGWMGPLAVRPDRQGSG
                     LGKTMIRAGIIWLRERGARTIGLETMPRTIENIGFYSRLGFVPGHLTVTLTRDLQRRP
                     LLHPEVLSTSGSARGDRVAECRRLTTALLPDTDFTRVLNATADLRIGDTLMVRDP"
     gene            complement(631..3054)
                     /locus_tag="VLD58_00030"
     CDS             complement(631..3054)
                     /locus_tag="VLD58_00030"
                     /inference="COORDINATES: protein motif:HMM:NF014516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC family ATPase"
                     /protein_id="HSB52703.1"
                     /translation="MRLERLRLVNFRQHEDTELVFGAGLTGIIGPNGAGKTTLLEAIA
                     WSLYGADAARGNRDTIRRRNAGPRSPVRVELDFVLGAHRFRVVRSLNGAELYQDAETA
                     PRENGIGAVTEKISRLLGMSREEFFNTYFTGQKQLAVMAAMKPTERAQFLSRVLGYEK
                     LRLAQDRLRETRLTIKATLQALESSLPDPAELDEAESRARARLGDAEKLEVTGSKALE
                     LTDRRKTEMAPRWQELQQQREKVASLESDLRLAEHRVNAARESFAQLDRQLVAANEAR
                     SRLDGLKTQLAPLEALRAERARLDELAAAHAKRQVALAQLEEARSALTNIRQRLSKLP
                     PADEVEVARAKVEEQRARLEVIDESYRDRRSAWDRDLQDAKTKRAALRDQYKDLKEQL
                     DRITEAGPQGACPTCARPLGTEYDNVLGVLDRQLQDVMFNGNYFKARVEQLTVEPPEL
                     ADLDRQRTAGDKALSDATTTLARLTALAQEGPALRSEQARLEARAADLEKQASEGPKD
                     YDPNHHADVRKQLHALDPLALQAERLRAAAEKAEALVVEAEAAEKSLSERENQARVTR
                     EQLAAMGYRQEDYEAAKGAWETVERERREAEFNLIKVKAEKGAAKEAVDAVLARRAER
                     AKREEAARKAARELALYNELDRAFTDLRTDLNQQLRPDLSDLASGFLRDLTNGRYTEL
                     ELDEDYIATIVEAGEPKPVISGGEEDIASLALRLAISQMIADRAGQPLSLLVLDEVFG
                     SLDEERRSSVLDLLRSLADRFPQVVLITHIESVREGFDRVIRVDYDPERGAARVRDEP
                     QGVSDGLAA"
     gene            complement(3051..>3701)
                     /locus_tag="VLD58_00035"
     CDS             complement(3051..>3701)
                     /locus_tag="VLD58_00035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52704.1"
                     /translation="VGGLVTTEDLTRGKWDYVALGDYHVQREVAPGIWYSGSLDYVSP
                     NPWGELADEANYNIPGKGWLKVDLARRKVTRQTIKLARSFIDLLPLDGTGRTAAEIDT
                     MIATSLDGIKGGFEDQVVRQVIRNVPRHIQRELNYTAIRSYQAKALHFQLDLRRPEVH
                     RQVGVGAPGTRQTLSDTVETYLRDRYLPENVERDPFVQTGLQAMREVEAQAGEGGL"
BASE COUNT          494 a         1275 c         1292 g          640 t
ORIGIN      
        1 ctcgggtcgc gcaccatcag ggtatcgccg atccggagat cggcggtggc gttgagcacc
       61 cgggtaaaat cggtgtcggg gaggagcgcc gttgtcagcc ggcggcactc ggccacccga
      121 tcgccacggg ccgagccgga ggtggagagg acttcggggt ggagcagcgg gcggcgctgg
      181 agatcgcggg tgagcgtcac cgtgagatgc ccgggcacga agccgagccg gctgtagaag
      241 ccgatgttct cgatggtgcg gggcatggtc tcgagcccga tggtgcgggc gcctcgctcg
      301 cggagccaga tgattccggc ccggatcatg gtcttgccga gccctgagcc ctgccggtcg
      361 ggacgcaccg cgagcgggcc catccagcct tcgcgcccgg agaggtgcac catgttgaag
      421 ccgcagagct cgccgtcggg gtcgcgccag accatggccc cgtcgccggc gtcctccagc
      481 gcatagcgcc agatggccgg gttgagatag ggcacccgga cgccggtcat cccgtcccgc
      541 cggtagcggt cggtgaaggc ctcggagaag acccggttga gcggctccac atcgcgcacg
      601 gtgggccgtt cggggccata gatctcccga tcaggcagcc aggccatcgc tcactccctg
      661 cggttcgtcc cgcacccgcg ccgcaccccg ttcgggatca tagtccaccc ggatcacccg
      721 gtcgaagcct tcccgcacgc tttcaatgtg tgtgatgagg acgacctggg ggaagcggtc
      781 ggccaggctc cggagcagat cgagcaccga ggaccgacgc tcctcatcga gcgaaccgaa
      841 cacctcatcc agcaccagga gcgacagcgg ctgtcccgcc cggtcggcga tcatctggct
      901 gatggccagg cggagcgcca ggctggcgat gtcctcctcg ccgcccgaga tgaccggttt
      961 gggctcgccc gcctccacga tggtggcgat gtagtcctca tccaattcga gttcggtgta
     1021 tcgcccgttg gtgagatccc ggaggaagcc gctcgccagg tctgagagat cgggccgtag
     1081 ctgctggttg agatcggtgc ggagatcggt gaacgcccgg tcaagctcgt tgtagagcgc
     1141 cagctcccgg gcggccttcc gggccgcttc ctcccgcttg gcccgctcgg cccgccgggc
     1201 cagcaccgcg tcgaccgctt ccttcgccgc ccccttctcc gccttcacct tgatcaggtt
     1261 gaactcggcc tcgcgccgct cccgctccac cgtctcccag gcacccttcg ccgcctcgta
     1321 gtcctcctgc cggtaaccca tcgcggccag ctgctcgcgg gtgacccggg cctggttctc
     1381 ccgctcggag agagactttt ccgcagcttc cgcctccacc accagggcct ccgccttttc
     1441 ggcggcggcc cggagccgct cggcctggag cgccagcggg tcgagggcat ggagctgctt
     1501 gcggacgtcg gcgtgatgat tggggtcgta gtccttgggg ccctccgatg cctgcttctc
     1561 gagatcggcg gcgcgggcct cgaggcgggc ctgctcgctc cggagcgcgg gcccttcctg
     1621 cgccagggcg gtgagacggg ccagcgtggt ggtggcgtcg ctcagcgcct tgtcgccggc
     1681 ggtccgctgc cggtcgagat cggccagctc gggtggttcc acggtgagct gctcgacccg
     1741 ggccttgaag tagttgccgt tgaacatcac gtcctggagc tggcggtcga gcacacccag
     1801 cacgttgtcg tactcggtcc cgagcggccg ggcgcaggtg ggacaggcgc cctgcgggcc
     1861 ggcctcggtg atccggtcga gctgttcctt gagatccttg tactgatccc ggagcgcggc
     1921 gcgcttggtc ttggcatcct ggaggtcgcg atcccaggcg gagcggcggt cccggtagct
     1981 ctcgtcgatc acctcgagcc gggcgcgctg ttcctccacc ttggcgcggg caacctcgac
     2041 ttcgtcggcc ggcggcagct tgctgagccg ctggcgtatg ttggtgagcg cggagcgggc
     2101 ctcctccagc tgcgccaggg cgacctggcg cttggcgtgg gcggcggcca gctcgtcgag
     2161 ccgggcccgc tcggctcgca gggcctcgag cggggcaagc tgggtcttga gcccgtcgag
     2221 ccggctccgc gcctcgttgg cggcgaccag ctggcggtcg agctgggcaa agctctcgcg
     2281 ggccgcgttg acccggtgtt cggcgagacg caggtccgat tcgagcgagg ccactttctc
     2341 ccgctgctgc tgcagctcct gccaccgggg cgccatctcg gtcttgcgcc gatcggtgag
     2401 ctcgagcgcc ttgctgccgg tgacctcgag cttctcggcg tcgccgaggc gggcgcgggc
     2461 ccgggactcc gcctcatcga gttcggcggg atcggggagc gacgattcca gcgcctggag
     2521 cgtggccttg atggtgaggc gcgtctcgcg cagccggtcc tgcgccagcc ggagcttttc
     2581 gtacccgagc acccgcgaga ggaactgggc ccgctcagtg ggcttcatcg ccgccatcac
     2641 cgcgagctgc ttctggccgg tgaagtaggt gttgaagaac tcctcgcggg acatgccgag
     2701 gagccgggag atcttctcgg tgacggcccc gatgccattc tcccggggcg cggtctccgc
     2761 gtcctggtag agctcggcgc cgttgagcga tcgaaccacc cggaaacggt gggccccgag
     2821 gacgaaatcg agttcgaccc ggacgggcga gcggggaccg gcgttccgcc ggcggatggt
     2881 gtcccggttc ccccgcgcgg catcggctcc gtacagcgac caggcaatcg cctcgaggag
     2941 cgtggtcttc cccgccccgt tgggcccgat gattccggtg agaccggccc cgaacacgag
     3001 ctcggtgtct tcgtgctgcc ggaagttgac cagccggagc cgctcgagtc tcacaggcca
     3061 ccctcgcctg cctgggcctc gacctcgcgc atggcctgga ggccggtctg gacgaacggg
     3121 tcgcgttcga cattctccgg caggtagcga tcccgcaggt acgtctcgac ggtatcgctc
     3181 agcgtctgac gggtgcccgg cgcgcccacc ccgacctggc gatggacttc cggccgccgc
     3241 aggtccagct ggaaatggag tgccttggcc tggtagctcc ggatggcggt gtagttgagt
     3301 tcccgctgga tgtgccgggg aacgttgcgg atgacctgcc gcacgacctg atcttcgaaa
     3361 ccgcctttga tgccatccag cgaagtcgcg atcatggtat cgatctcggc agcggtccgg
     3421 cccgtcccat ccagcgggag gagatcgatg aagctgcggg ccagcttgat ggtctggcgg
     3481 gtgaccttgc gccgagccag gtcgaccttg agccacccct tccccgggat gttgtagttg
     3541 gcctcgtcgg ccagctctcc ccacggattc gggctcacat agtcgagcga gccgctgtac
     3601 cagatccccg gcgccacctc ccgctgcacg tggtagtcgc ccagcgccac atagtcccac
     3661 ttcccgcgag tcaggtcctc ggttgtgacc agacctccga c
//
LOCUS       DATIFF010000005         2199 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_923771, whole genome shotgun sequence.
ACCESSION   DATIFF010000005 DATIFF010000000
VERSION     DATIFF010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2199
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_923771"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="VLD58_00040"
     CDS             <1..201
                     /locus_tag="VLD58_00040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52705.1"
                     /translation="GPGEYTSPPVISSNSVRFLEVSLVTPAVPAGPTQRFRFRAEAPG
                     HAVITFHHSSQSPTVEDTVDVH"
     gene            355..732
                     /locus_tag="VLD58_00045"
     CDS             355..732
                     /locus_tag="VLD58_00045"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSB52706.1"
                     /translation="MTDAAAYPYETRLNIQYGPLELIDVQCLADACTSRWYNQTLCRV
                     NDSVVRLGVVQGEYHWHQHADEDEFFYVVEGRFLIDLEGRTVELLPRQGFVVPRGVRH
                     RPRAPERTIILMVEGAGIVPTGS"
     gene            1096..1236
                     /locus_tag="VLD58_00050"
     CDS             1096..1236
                     /locus_tag="VLD58_00050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52707.1"
                     /translation="MIRRAADEAPLSEAELNALGRDHWELAGVVSAGGVVHYYFKRAA
                     NP"
     gene            1598..>2199
                     /locus_tag="VLD58_00055"
     CDS             1598..>2199
                     /locus_tag="VLD58_00055"
                     /inference="COORDINATES: protein motif:HMM:NF024852.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HSB52708.1"
                     /translation="MRIAVFGISGRTGRAILEGARERGLNLVALVRPTANVPVAGHLR
                     VYRGDLADPGTVQQVVANTRAVVCVLGPRPPFGDIFCAAGTGAIISTMKACGVARLIC
                     QTGAMIGPLPRTVSRPMRWAARRFAAAYPAVAADRAEQEALVRASALDWTLVKPPRLT
                     DRSSRRPVTAGPAISVGLLSSVGRPALAAFLLDEVLRPQF"
BASE COUNT          322 a          745 c          764 g          368 t
ORIGIN      
        1 ggacccggcg agtacacgag tccaccggtc atctcctcga actcggttcg cttcctcgaa
       61 gtctccctgg tgactcccgc ggtcccggcc gggcccaccc agcgctttcg cttccgggcc
      121 gaggcgccgg gacacgcggt gatcaccttc caccattcga gccaaagccc gacggtcgag
      181 gacaccgtcg atgtccactg agtcagccca tccgccatat tcggcccgaa cggcgggccc
      241 gcgcggtgac gtcccacgac gggacgcgcg ctggcggggc cagggaaggt gtgggtatcg
      301 tgcgcaaggc gtcgcggcag ggcgacgccc acaccatccc cgctggagcg cgccgtgacc
      361 gatgcagcag cctatcccta tgagacccgg ctcaacattc agtatggccc gctggagctg
      421 atcgatgtgc agtgtctggc agatgcctgc acctctcggt ggtacaacca gaccctctgc
      481 cgggtgaacg actcggtcgt ccggctcggg gtcgtgcagg gggagtacca ttggcaccag
      541 cacgctgacg aggacgagtt cttctatgtc gtggagggtc gcttccttat cgacctagag
      601 ggccggacag tggagctgct gccccggcaa ggtttcgtcg ttccccgcgg ggtgaggcac
      661 cggccgcggg cacccgaacg cacgatcatc ctgatggtag agggcgccgg gatcgtgccc
      721 acggggagct gatcgaggcg gacgtcaacc gggattcatg acgtgtccaa gcggtcgcag
      781 tgcctcccga gatcctgacc cggctcccgc gcggcgagcg gcaggagccg cggcgcgagg
      841 ccgttgcctc gcgcgacacg ccccgtggtg tcgcaggcgg ctgccggcca ggcgcggctg
      901 aaccgcaaac ccgccaagcg gaagcggcga gcattgagca ggcccgcctc cgaaatgagg
      961 ccggcattcc gtaaggaggt ctttatgatg cctttcacca ccgaagtccc gttgccgccg
     1021 cctgcagctc cccaccctgg aaccccgctc gagccaccgt ccgtatgggt cgagccccgt
     1081 tgggagtatc gcgacgtgat ccgccgcgcc gccgatgagg caccgctctc ggaagccgag
     1141 ctcaacgcgc tgggccggga ccattgggag cttgccggcg tggtctcggc gggcggcgtg
     1201 gtccactact acttcaagcg cgcggccaat ccctagcggc ctggtcacgc accgcgcggg
     1261 gtgagggccg gcaggacgga aggccgggag cgagatggcc gcagcgactg ccgagcgagc
     1321 acatgccgat ccgagcattg gtgcgtctgg cctttgtctt ttgcggtggc ttcttcatcg
     1381 gggggcggct cgtggacgcc gtgcgcgtct ggcgactctg gcagggaaca gctgtcattg
     1441 atccgtcggc agccgatctg tatcgcacca cgttctggat agatgtgggc agcgccggca
     1501 tcgccgccgc gattgtaggc ctcgtccact ggttgctccg gccacgggcg ggcggtgggg
     1561 cgtttcggcc ctgacgggca gttagcgaga ctcggccatg cggatcgccg tcttcggcat
     1621 atcaggtcgg actggccgcg caatcctcga gggcgcgcgg gaacgggggc tcaacctcgt
     1681 tgcgctcgtc cgcccgacag ccaacgtccc ggtggcaggt cacttgcgcg tgtaccgggg
     1741 tgatctcgcc gatcccggca ccgtgcaaca ggtggtcgcc aacacgcggg ctgtggtctg
     1801 tgtgctcggg ccacggcccc cctttggcga catcttctgt gccgccggca ccggagccat
     1861 catcagtacc atgaaggcgt gcggggttgc ccggctcata tgccagacgg gagcgatgat
     1921 cggcccgctt ccccgaactg tgagccggcc catgcggtgg gccgcgcggc gattcgccgc
     1981 cgcgtacccc gcggtggctg cggatcgcgc cgagcaggag gcactggtac gtgccagcgc
     2041 gttggactgg acgctggtca agccgccgcg cctcaccgac cgatcttcgc ggcgtcctgt
     2101 cacggccggg ccggcgatat cggtgggact cctttcctcc gtaggccgcc cggcgcttgc
     2161 ggcgttcctg ttggacgagg tcctgcggcc gcagttcat
//
LOCUS       DATIFF010000006         4703 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_670, whole genome shotgun sequence.
ACCESSION   DATIFF010000006 DATIFF010000000
VERSION     DATIFF010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4703
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_670"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..569
                     /locus_tag="VLD58_00060"
     CDS             <1..569
                     /locus_tag="VLD58_00060"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSB52709.1"
                     /translation="LLVHRPIYDRFVEKLVAASAALVCGDPLDPKTVVGPMIDRGAAD
                     RVESWTQEAIAAGAKVLLAPRRTGNVLTPGLLAEVPHDAKVSCREIFGPVSIVAPYSD
                     WADAMAQVNDSDFGLQAGIFTHDVNRIFQAFQGLEVGGVIANDFPTLRVDNYPYGGVK
                     DSGFGREGVRYAMDEMSEPRMLALNLTR"
     gene            complement(588..1532)
                     /locus_tag="VLD58_00065"
     CDS             complement(588..1532)
                     /locus_tag="VLD58_00065"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSB52710.1"
                     /translation="MPRSHVPIIGLLLILGGSTASLLGQGPPGGVAADSLYQSKQWPA
                     AAAAYDKAARAEPGNVRLWYRLGIAELSQGHFARAEAAFLKASAIPPGPGGRPVHGLS
                     FYNLAAARARQGKADGAFAALDSAFAITLLPPGQLENDSDFVTLRGDPRFAERVRAAR
                     LAFTPCDTIAHARDLDFWVGDWDVYTTARQLAGHSSVQRILASCVILENWTGSLGGEG
                     KSFNWFNTTTREWQQTWVSAQASSTEYREGRLEGNRMVLLAETQTPQGAKATTRLSFT
                     NLGPNKVRQLFEQSADGRQTWVTTTDLIYVRQGSGEQP"
     gene            complement(1604..2479)
                     /locus_tag="VLD58_00070"
     CDS             complement(1604..2479)
                     /locus_tag="VLD58_00070"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HSB52711.1"
                     /translation="MSRWPDPDRVLRTTADVRIGTFRCSITHPEFRTAGPIEGYSVVF
                     PRSAVWIEHEGKRPFVADPHVITIYNRGQLYTRRAIAAEGDRSDWLSVSRPLATAIVA
                     GIDAEASSHEEGPFPVAFAPASAELYFRQRVLFSRVRRNAIDDFELEQEVILLVGSAL
                     ERALPPSGPRAELRRGRLVDLVERARETLACDPFRSWSVRDLAARLETSPFHLCRGFR
                     RLTGQTLHNYQLGLRLRAALERMEGSDRDLSRLAQDLGFSSHSHFTSAFRERMGRTPS
                     HARAQLQLRVSAISR"
     gene            complement(2521..3804)
                     /locus_tag="VLD58_00075"
     CDS             complement(2521..3804)
                     /locus_tag="VLD58_00075"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HSB52712.1"
                     /translation="MTDSADHHPVPVVTFTLLALCWVMALLTLPGGEDTLLLRLYHFG
                     AKDNASIASGEYWRLLTAAFLHGGIVHILINSWSLYQLGALLEPVLGRSRFLATYLIS
                     AVTGSLSSWAFNSAIGVGASGAIFGLLGSALYLSWRGKSARIPPTALNSLVLWTIYNL
                     VYGFITPTIDNAAHMGGLVGGLLCAMLLRGVLVPWAVIGAGTATLAWGGYEVARTPDR
                     MSEAAAFIEAEQADEKGDTVAARVALAKAPDFAPALLSGAFFRLRESDNKGALELADS
                     ALRILADSGPRGRASRRAASAIGIENRLLLGRAHLFRAWALFGMNLLDEGIIDASIAR
                     TSPERYTKVRASLLLGQAYLQKQKFEDALSAYRDATAAEEAGVRGEAWFGAAAALDHL
                     GRTAEALTEIDKAIAADSSDHRYTEFRTELQGRPH"
     gene            complement(3794..>4703)
                     /locus_tag="VLD58_00080"
     CDS             complement(3794..>4703)
                     /locus_tag="VLD58_00080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52713.1"
                     /translation="LDGALDALRRRKLRAFRQDRILHARRLEERLVSLESPDPILDRR
                     FGWAKVELDGRLEERPGLGRFVSRDPVRTGRALLAAGDREVVRDLIRGLTRRADETSE
                     HHALPGLVESYLCWTGDLPLLSRSWPLVVAAAEQHPSHLAVAVRDRLIAAARAAGESD
                     AAERLQAIPASGPADPAPHIELTGYGAEPAGLVSGIVETLWGVEPDLIRGEVRVAPAL
                     PRGWSEMALRRLRVGPTSFDLRLRRRPERTVLAVRRSGGPPIRLRTSLRDDAAHGPVT
                     IDQVELGGREATFMVEDVHEVTFHDG"
BASE COUNT          744 a         1638 c         1624 g          697 t
ORIGIN      
        1 ggctcctggt ccatcgcccg atctacgacc gcttcgtgga gaagctggtc gcggcctcgg
       61 ccgcgctggt ctgtggcgac ccgctcgatc ccaagaccgt ggtcggtccc atgatcgatc
      121 gcggggccgc ggaccgcgtc gaaagctgga cccaggaggc gatcgccgcc ggcgccaagg
      181 tgctgctcgc gccccggcgc accggcaacg tgctcactcc cggcctcctc gccgaggtgc
      241 cgcacgacgc caaggtctca tgcagggaga tcttcgggcc ggtgagtatc gtggccccct
      301 actccgactg ggccgacgcg atggcgcagg tgaatgactc cgacttcggg cttcaggccg
      361 ggatcttcac tcacgacgtc aaccggatct tccaggcgtt ccagggactc gaggtgggcg
      421 gggtgatcgc caacgatttc ccgacgctcc gggtcgacaa ctacccgtac ggcggcgtga
      481 aggattccgg cttcgggcgc gaaggagtgc gctacgccat ggatgagatg agcgagccgc
      541 gcatgctcgc gctcaacctg acccgctgac actactgtgc cgcaccgcta gggttgctcc
      601 ccgcttccct ggcgcacgta gatcaggtcg gtggtggtga cccaggtctg gcgcccatcg
      661 gccgactgct cgaagagctg ccgcaccttg ttgggaccga ggttggtgaa gctgagccgg
      721 gttgtcgcct tggctccctg cggggtctgg gtctccgcca gcagcaccat gcggttcccc
      781 tccagccgtc cctcccgata ttcggtcgac gaggcctgtg ccgataccca ggtctgctgc
      841 cattcccgcg tcgtggtgtt gaaccagttg aagctcttcc cttcccctcc gagcgacccg
      901 gtccagttct ccaggatcac gcagctggcg agaattcgct gcaccgagct gtggcccgcg
      961 agctgacgcg cggtggtgta gacgtcccag tcacccaccc agaagtcgag atcccgcgcg
     1021 tgcgcaatgg tgtcgcacgg ggtgaacgcc agccgcgccg ctctgacccg ctcggcgaaa
     1081 cggggatcgc cccgcagcgt cacgaagtcg ctgtcattct cgagttgccc gggtggcagc
     1141 agggtgatgg cgaatgccga gtccagtgcg gcaaatgcgc catccgcctt gccctggcgg
     1201 gcccgggcgg cggccaggtt gtagaacgac aagccgtgca ccgggcggcc ccccggtccc
     1261 ggtggaatag cgctggcctt gaggaaggcc gcttcggccc gcgcgaagtg tccctgactc
     1321 agctccgcga tccccaagcg gtaccagagc ctcacgttgc cgggctcggc ccgcgccgcc
     1381 ttgtcgtaag ccgccgcggc ggctggccac tgcttcgatt gatagagact gtcagctgcc
     1441 acgccaccgg gagggccctg gcccaggagt gaagcggtcg aaccgccgag aatcaggagc
     1501 aagccgatga tggggacatg ggagcgcggc atcagactct cgcgagcgaa ggtggagact
     1561 gtcgggcgac cagatccaac cttaccggcc accagaccgg ccgctatcga ctgattgcgc
     1621 tgacccgtag ctgcagttgc gcccgggcgt gggagggggt ccgccccatg cgctcgcgga
     1681 aggcgctggt gaagtgactg tgactggaga atccgaggtc ctgcgccagg cggctcaggt
     1741 cgcgatctga accctccatt cgctccagcg cggcccggag ccggagcccg agctggtagt
     1801 tgtgcagcgt ctggccggtg agcctccgaa agccgcggca aagatgaaag ggcgaggttt
     1861 cgagccgggc cgcgagatcc cgcacgctcc aggacctgaa ggggtcgcag gccagagtct
     1921 cgcgggcgcg ttccaccagg tcgacgagac gcccgcggcg cagctccgcc cgcggtcccg
     1981 aaggagggag agcccgctcc agcgccgatc ccaccagcag aattacctcc tgctccagct
     2041 cgaaatcgtc gatcgcgttg cggcggaccc gggagaacag cacccgctgg cggaagtaga
     2101 gttcggcgct ggccggcgcg aacgccaccg gaaagggccc ctcctcatgc gacgacgcct
     2161 cggcatcgat ccccgcgacg atcgccgttg caagcggccg gctcacgctc agccaatccg
     2221 accggtcacc ctcggccgcg atggctcggc gggtgtagag ttggccccga ttgtagatgg
     2281 tgatgacatg aggatcggcc acgaagggcc gcttgccctc gtgctcgatc cacaccgcgc
     2341 tccgggggaa cactacgctg taaccctcaa tcgggccggc ggtgcggaac tcgggatgag
     2401 tgattgagca gcggaaggtg ccgatccgga cgtcggcggt ggtgcggagg acccgatcgg
     2461 ggtcgggcca gcggctcaag ggcatgtccg ctggtacgat gttgtcgcca cgctggtttc
     2521 ctagtggggc cgcccctgca gttcagttcg aaactcggtg tagcggtggt cggaggaatc
     2581 cgccgcgatc gccttgtcaa tctccgtgag cgcctcggcg gtccgcccca ggtggtcgag
     2641 cgcggccgcg gccccgaacc aggcctcgcc ccggactccg gcctcttcgg cagcggtggc
     2701 gtcgcggtat gccgagagcg cgtcctcgaa cttctgcttc tgcaggtagg cctgtcccag
     2761 cagcaggctc gcccgaacct tggtatagcg ctcgggactg gtgcgcgcga tcgacgcgtc
     2821 gatgatcccc tcgtcgagca ggttcatccc gaacaacgcc cacgcccgga agagatgggc
     2881 ccgtcccagc agcagccggt tttcgatccc gatcgcgctc gctgcccggc gtgacgcccg
     2941 gccgcgcggc ccgctgtcgg ccaggatccg gagcgccgag tcggccagct cgagcgcgcc
     3001 cttgttgtcg gactcgcgca ggcggaagaa ggcgccggat aacagggccg gcgcgaagtc
     3061 gggcgccttc gccagagcga cgcgtgcggc caccgtgtcg cccttctcgt ccgcctgttc
     3121 cgcctcgatg aacgccgcgg cctccgacat cctgtccggc gtccgggcca cctcgtaacc
     3181 gccccatgcc agcgtcgccg tccccgcccc gatcaccgcc cacgggacca ggactccacg
     3241 cagcagcatc gcgcagagca gcccgcccac caggccaccc atatgcgccg cgttgtcgat
     3301 cgtgggcgtg atgaacccgt agaccaggtt gtagatggtc cagagcacca gggagttgag
     3361 cgctgtcggc gggatccgcg cggacttccc ccgccagctc aggtacagcg cgctcccgag
     3421 caggccgaag atcgcgcccg acgcgcccac accgatggcc gaattgaagg cccagctcga
     3481 cagggagccg gtcacggccg agatcagata ggtcgcaagg aagcgggagc ggcccagcac
     3541 cggctcgagc agggcgccga gctggtagag cgaccaggag ttgatgagga tgtggacgat
     3601 cccgccgtgg aggaaggccg cggtcaggag ccgccagtat tcccccgacg cgatcgaggc
     3661 gttgtccttg gcaccgaagt gatagagccg gaggagaagc gtgtcctcac cgcccggcag
     3721 ggtcagcaac gccatcaccc agcagagcgc cagcagggtg aaggtgacca ccgggaccgg
     3781 gtggtggtct gcgctatccg tcatgaaagg tcacctcgtg aacatcctcg accatgaagg
     3841 tcgcctctcg gccccccagc tcgacctggt cgatggtgac gggcccgtgg gcggcgtcgt
     3901 cccggagcga ggtgcgaagc cggatcgggg gcccgcccga gcggcgaacc gccagcaccg
     3961 tgcgctccgg ccggcgccgg agcctgagat cgaaggaggt gggcccgacc cgcaggcggc
     4021 gcagcgccat ctcgctccag ccccggggga gcgcgggcgc gacgcggacc tccccgcgaa
     4081 tcagatcggg ctccacgccc cagagggttt ccacgatccc gctcaccagc cccgccggct
     4141 cggcgccgta gcccgtcagc tcaatgtgcg gcgcaggatc ggccggtccc gatgcgggga
     4201 tggcctgcag gcgctccgcc gcgtcgctct cgccggcagc gcgggcggcg gcgatgagcc
     4261 ggtcacgcac cgccaccgcc aggtgcgacg ggtgctgttc ggctgctgcc accaccaggg
     4321 gccagctgcg cgacaggagc ggcagatcgc cggtccagca gagatagctc tcgaccagtc
     4381 ccggcagggc gtgatgctcc gacgtttcgt cggcgcgcct ggtgagccct cggatcaggt
     4441 cccgcaccac ttcccggtcg ccggccgcca gcagggcccg gccggtgcgc accgggtcgc
     4501 gggagacgaa ccgccccagg ccggggcgtt cctccagccg gccgtcgagt tccaccttgg
     4561 cccagccgaa gcggcggtcg aggatcggat cgggagactc gagcgaaacc agccgctctt
     4621 ccagccggcg ggcatgcaga atccggtcct ggcggaacgc gcggagcttg cgccgccgga
     4681 gtgcgtcgag ggccccatcg agt
//
LOCUS       DATIFF010000007         1707 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_616183, whole genome shotgun sequence.
ACCESSION   DATIFF010000007 DATIFF010000000
VERSION     DATIFF010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1707
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_616183"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..843)
                     /locus_tag="VLD58_00085"
     CDS             complement(<1..843)
                     /locus_tag="VLD58_00085"
                     /inference="COORDINATES: protein motif:HMM:NF012550.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HSB52714.1"
                     /translation="MNLRTLFDKVWDSHVVRHDRGGPALLYVDLHLVHEVTSPQAFEG
                     LRLAGRRVRRPDLTIATVDHNVPTGDRSLPIVDPISRRQVDLLVQNARAYGIELYDLG
                     SSGQGIVHVIGPELGATQPGMTIVCGDSHTSTHGAFGALAFGIGTSDVEHVLATQTVR
                     FARPRTMEARFTGMPGHGVGAKDLILALIGRIGTAGATGHVIEYTGAAIRMLSMEGRM
                     TVCNMSIEAGARAGMIAPDETTFAYLMGRPRAPRGRAWTNAVDRWSALAGDPGASHER
                     LVEID"
     gene            complement(874..>1707)
                     /gene="ilvC"
                     /locus_tag="VLD58_00090"
     CDS             complement(874..>1707)
                     /gene="ilvC"
                     /locus_tag="VLD58_00090"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: protein motif:HMM:NF004017.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HSB52715.1"
                     /translation="LVPDQDASTIYDQAIAPALTRGKTLMFAHGFNIHFGEIRPPADV
                     DVSMIAPKSPGHLVRSEFEAGRGVPGLVALHQDASGYALADALAYAAGIGCTRAGVIE
                     TSFREETETDLFGEQSVLCGGVSALIKAGFETLVEAGYRPEMAYFECLHELKLIVDLI
                     YRGGLGFMRYSISDTAEYGDYTRGQRIITDATREEMRSILREIQSGAFAKEWLAEHRS
                     GGANFLRMRQADAGHEIERVGAELRAMMPWSEEGKAKAAEQSSQIPVPSGPVAKAAAV
                     G"
BASE COUNT          264 a          607 c          558 g          278 t
ORIGIN      
        1 gtcgatctcc accagccgct cgtggctcgc gccaggatcg ccggcaagag cgctccagcg
       61 gtcgaccgcg ttggtccatg cccggccgcg cggagcccgc ggccgcccca tcaggtaggc
      121 aaaggtggtc tcatccggcg cgatcatccc ggcccgcgcc cccgcctcga tggacatgtt
      181 gcagaccgtc atccgccctt ccatggagag catgcggatg gcggctccgg tgtactcgat
      241 gacgtggccg gtggccccgg ccgtcccgat ccggccgatc agcgccagaa tgagatcctt
      301 ggccccgaca ccgtgacccg gcatgccggt gaagcgcgct tccatcgtgc ggggccgggc
      361 aaagcggacg gtctgggtgg cgagcacgtg ctccacgtcg ctggtgccga tcccgaacgc
      421 cagggcgccg aaggccccat gggtggaggt gtgggaatcg ccgcagacga tcgtcatgcc
      481 cggctgcgtg gccccgagct cgggcccgat cacatggact atcccctgcc ccgacgaccc
      541 aagatcgtag agctcgatac cgtacgcccg ggcgttctgc accagcaggt ccacctgacg
      601 ccgtgaaatc gggtccacga tgggcaggga ccggtctccg gtgggcacgt tgtggtcgac
      661 cgtcgcaatc gtcagatcgg ggcgtctgac ccgccgcccc gccagccgca ggccttcgaa
      721 ggcctggggt gaggtcacct cgtggaccag gtgaaggtcg acgtagagca gcgccggacc
      781 gccacggtcg tggcggacga cgtggctgtc ccagaccttg tcgaacagcg tgcgcaggtt
      841 catcgcctat cgttcccagt tcccagttcg aagtcatccc accgcagcgg ccttcgccac
      901 aggcccactg ggaaccggga tctgcgaact ctgttcggcc gccttcgcct tcccctcctc
      961 cgaccacggc atcatcgccc gcagctcagc cccgacccgt tcgatctcgt ggccggcgtc
     1021 ggcctgccgc atccggagga aatttgcccc gccgctccga tgctccgcca gccactcctt
     1081 cgcgaaggcg ccactctgaa tctcccggag gatactccgc atctcctcgc gggtcgcgtc
     1141 ggtgatgatc cgctgccccc gggtgtagtc gccgtactcc gcggtgtcgc tgatggagta
     1201 gcgcatgaag ccgaggccgc cccgatagat caggtccacg atgagcttga gctcgtgcag
     1261 gcattcgaaa tacgccatct cggggcggta gcccgcctcg accagggtct cgaagccggc
     1321 cttgatcagc gccgaaacgc cgccgcagag caccgactgc tcgccgaaga ggtcggtttc
     1381 cgtttcctcg cggaagctgg tttcgatcac cccggcccgg gtgcagccga tgccggcggc
     1441 gtaagccagc gcgtcggcca gcgcgtagcc gctcgcgtcc tggtgcaggg cgacgaggcc
     1501 cggaactccc cggccggcct cgaactcgct ccggacgagg tgaccgggcg acttgggcgc
     1561 gatcatcgag acgtccacat ccgctggcgg ccggatttcg ccgaagtgaa tgttgaaccc
     1621 gtgagcgaac atcagggtct tgccgcgagt cagcgccggc gcgatcgcct ggtcgtagat
     1681 cgtgctggca tcctggtcgg gcacaag
//
LOCUS       DATIFF010000008         1048 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_616199, whole genome shotgun sequence.
ACCESSION   DATIFF010000008 DATIFF010000000
VERSION     DATIFF010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_616199"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..265
                     /locus_tag="VLD58_00095"
     CDS             <1..265
                     /locus_tag="VLD58_00095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52716.1"
                     /translation="VAQEGRQEDASLPVEVDLGSAREHESLEAPGGLVRDGQGRDLRR
                     EPTPPVRFRGREPSDDVSWSPGAHDRGEPTAAAGSAGAPSTGA"
     gene            498..926
                     /gene="mraZ"
                     /locus_tag="VLD58_00100"
     CDS             498..926
                     /gene="mraZ"
                     /locus_tag="VLD58_00100"
                     /inference="COORDINATES: protein motif:HMM:TIGR00242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0051302 - regulation of cell division
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HSB52717.1"
                     /translation="MFTGEYRHTVDGKGRLAVPVKFRAQLDPGSMVSGWLDDCLAIHP
                     KAGWDALAAKVAALPITDPQSRRFQRFVFSQAVEAEMDRQGRLLLPAFLRESIGLGTD
                     AVVVGSRDHAEIWAPDRWDAYRRALEDPQELAKAFEGLGI"
BASE COUNT          165 a          359 c          383 g          141 t
ORIGIN      
        1 agtcgcgcag gaaggccggc aggaggatgc gtccctgccg gtcgaggtcg acctcggcag
       61 cgcccgcgaa cacgaatcgc tggaagcgcc gggaggcctg gtccgtgatg ggcagggccg
      121 cgaccttcgc cgcgagccca caccgcctgt acggttccgg ggccgcgaac catccgacga
      181 cgtctcctgg agtccggggg cgcatgaccg gggggaaccg acggcggcgg cgggttcggc
      241 cggcgccccg agcaccggcg cctagatcgt ctggcggcgc ccggcgggcc ggggcgccac
      301 gcgccgcgca gggccgtcgc cccgttccgg ccgggactcc acccgcagat tcgcgcgaaa
      361 tcgatcttga cggggtcgaa tcgcgcggta gaatgcagtg aagtggcaca aagtggtgag
      421 aagtggggaa tcccgcgata gggacccacg ggaccgaccc accgatccgg ccaccagcac
      481 aggggtagac ccgacaggtg ttcaccggcg agtaccggca cacggtggac ggcaagggac
      541 ggctcgccgt gcccgtcaag ttccgtgcgc agctcgatcc cggatcgatg gtctcgggct
      601 ggctggacga ctgcctggcg atccatccca aggccggctg ggacgccctg gccgcgaagg
      661 ttgcggcgct cccgatcacc gacccgcaat cccgccgctt ccagcggttc gtcttctcgc
      721 aggccgtgga ggccgagatg gaccgccagg gcaggctgct gcttcccgcc ttcctgcgcg
      781 agtcgatcgg cctcggcacc gatgccgtcg tcgtcgggtc gcgcgaccac gcggagatct
      841 gggcacccga ccggtgggac gcctaccggc gggcgctcga ggacccacag gagctggcca
      901 aggccttcga agggctgggg atctagctcc gaccacatgc gcttccagga tccgctcggg
      961 atccgattcg tccgggatgg aggaacgatg tacgaagggc acctgccggt gctggtggag
     1021 gaggtcctcg agatgctcgc acccgccc
//
LOCUS       DATIFF010000009         5433 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_770177, whole genome shotgun sequence.
ACCESSION   DATIFF010000009 DATIFF010000000
VERSION     DATIFF010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5433
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_770177"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2865
                     /locus_tag="VLD58_00105"
     CDS             <1..2865
                     /locus_tag="VLD58_00105"
                     /inference="COORDINATES: protein motif:HMM:NF036531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2-macroglobulin family protein"
                     /protein_id="HSB52718.1"
                     /translation="VMFASPFTNAEAWITVEREGLIEQRRVTLTSGSTTLKFPVSEGW
                     APNAFVSIVVARGRSAKPGPLDDPGRPTIRVGYAELRVTPEVKRLTVGVKPLQAEYRP
                     GDTARVELKVTDRQGKGQRSEVTLWAVDEGVLALTGYKTPDPIDLLYAPRGLGLRLSS
                     NLTTVAPQVPEGEKGRSPGGGGGAGDADVFRSQFKTTAFFLGSVITDSAGGVVAKAKL
                     PDNLTTFRVMAVAVTAGDRYGNGESPMLVTRPLLARPALPRFLREGDKFSAGVVVNQR
                     AGGTPTVKVEAAAQGTQLTGDATATAKLESGRGREVRFEFKQPGMGPLGADSATFRFK
                     VSGAGDADAVQKRLDVRPAYRPRAWTASGVLNDTATTVIVLPDGIDPDRSRLQLTLGA
                     SPLSIIKGVAWWLRVYPYFCTEQTSSAALPIIALYRAQRAVKGLTLLPGDPRRDIELA
                     VSLLSRRQRPDGGIGYWSSSDWTTPWLSSYAGVTLLEARSVGVEVDDSVLARLAGYLR
                     ESLKNPRAVRAPVIGYYEHVQASLSDQVAAADFLSRYGKPELPVENELLRNAAQLAWE
                     DRVRLAEMLARRKAYKAARSLLQPTWEATKIEGRKAVVPEETVTWHHYFDSRTRPTAR
                     LLIATLAIDSAHPLLGPLVETLVQQGRAGNGIDPWNTQDYAATVSALVAFDRVVKGGA
                     ARSFSVSAGGRTLFTRSGGLTPLPAPATPGKPVPRPVPSIADSSLALTGLITDLGDGK
                     KGLRVSLNSPGTGSPIYYYLTVTEVPKARPVNPEDQGIKVERWYEKYDAPTPVVSVPA
                     GQLVRVRLRITVPSNREFVVVDDALPAGLEAVDLSLRTASLSPGPGVDQKSPYLTPEQ
                     AEGDEGDGEGGDAGYQGDEWYYGSWDSGWWSPFDHKEMGDSRVLYSATVLWKGTYTMT
                     YIARATTPGVFVRPPAHAEEMYNPAVYGRSDGGLFTVTEK"
     gene            2973..5216
                     /gene="pbpC"
                     /locus_tag="VLD58_00110"
     CDS             2973..5216
                     /gene="pbpC"
                     /locus_tag="VLD58_00110"
                     /inference="COORDINATES: protein motif:HMM:TIGR02073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1C"
                     /protein_id="HSB52719.1"
                     /translation="MFLGGAWWVARPLPPELLAPARQQSLTIEDRHGALLRSTRAGDG
                     SLTSWIPLANMDPDLPRAFVAVEDRRFYQHHGVDARAVVRAVRDNVTHLRVVSGASTI
                     TMQLARLIHPIGRGWADKVVQALWALRLEAHLTKNEILEQYLNRVPLGQGTVGVDAAM
                     RLYFGGSPSEASLGQAALLASLAKAPSSQNPMVDPRRALERRATGLAALRREGYLDRA
                     EELRARQEPLLGDGRGRPFLAPHFTSRLLLWAESAHRPIAGEWRTSIDLSLQSELEEE
                     VRHTVELLKDQGARQGALVVLDNQSGEVLAWVGSPDFWSDTSGQVDMVVSPRQPGSSL
                     KPFLYALAFDRGVTAASVLADISTTYQTASGPYHPRNYDRRYHGPVRAREALASSYNV
                     PAVGLTDRIGYATLLYGLRQAGFASLSRSAEHYGLGLSLGNGDVTLLELANGYRTLAN
                     GGIWSPVTYWATAEGQASPDSAPRRVVSQHSAALALDILSDPVARIPGFGLVTPFDWP
                     FRAAAKTGTSRHFTDNWAVATTGRFTVAVWVGNFSGQPMEGVSGVSGAGPLLHRAVLV
                     TARHYDPGDLLRPTEAGLVTARICRVSGQLAGPDCPQMTEYFAPGTIPQTTCRWHLNG
                     EVHLPSEYGEWEASVRVVSSRAEPGIPASVALKIRDSSDAPHPRNDRFRITSPERGDV
                     YRIPPGVEGRYATIALRAAGGAAGRVRWYVDGRPTPGERWSLTPGRHILRAESGTLSD
                     EVTFVVE"
     gene            5239..>5433
                     /locus_tag="VLD58_00115"
     CDS             5239..>5433
                     /locus_tag="VLD58_00115"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSB52720.1"
                     /translation="MTLPRRTLGTTDLSITTVGFGAWAAGGGDWAFGWGPQDDEDSLA
                     AMRRALELGVNWIDTAAIYGL"
BASE COUNT          840 a         1773 c         1970 g          850 t
ORIGIN      
        1 gtgatgttcg cgtcgccgtt caccaatgcc gaagcctgga tcacggtgga acgcgaaggc
       61 ctgatcgagc agcggcgggt cacgctcacc agcggctcga ccaccctgaa gttcccggtg
      121 tcggaaggct gggcgcccaa cgccttcgtg tcgatcgtgg tggcgcgggg ccggagcgcc
      181 aagcctggtc cgctggacga cccgggccgg cccacgatcc gggtggggta tgccgaactt
      241 cgagtgacgc cggaggtgaa acgcctgaca gtgggcgtga agccgctcca ggccgaatac
      301 cgccctggcg acaccgcccg ggtggagctc aaggtcaccg accggcaggg taagggccag
      361 cggagcgaag tgacgctttg ggcggtggac gaaggcgtgc tggcgctgac cggctacaag
      421 acgcccgacc cgatcgatct gctctacgcg ccgcgcggcc tcggcctccg gctgtccagc
      481 aaccttacca ctgttgcgcc gcaggtgccc gagggtgaga agggccggtc gccgggcggc
      541 ggcggtggcg cgggcgatgc cgacgtcttc cgctcccagt tcaagaccac cgccttcttc
      601 ctcggcagcg tgatcaccga ctcggccggg ggggtggtgg ccaaggcgaa gctgccggac
      661 aacctcacca ctttccgggt gatggcggtc gcggttaccg cgggcgatcg ctacggcaat
      721 ggcgagtcac cgatgctggt gacccggccg ctgctggccc gcccggcgct gccgcggttc
      781 ctgcgcgaag gcgacaagtt ctccgccggc gtggtggtga accagcgggc gggcggcacg
      841 ccgacggtaa aggtggaggc cgcggcgcag ggtacccagc taaccggcga cgcgactgcc
      901 acggcgaagc tcgagtcggg ccggggccgc gaggtgcggt tcgagttcaa gcagcccggc
      961 atggggccgc tcggcgccga cagtgccacc ttccgcttca aggtgagtgg cgcgggcgac
     1021 gccgacgcgg tgcagaagcg gctcgacgtg aggccggcat accggccccg ggcctggacc
     1081 gcctcggggg tgctcaacga caccgcgacc acggtgatcg tgctgccgga cggcatcgac
     1141 cccgaccgct cgcggctgca gctcaccctg ggggcgtcgc cgctcagcat catcaaaggg
     1201 gtggcctggt ggctcagggt ctatccctac ttctgcaccg aacagacctc cagcgcggcc
     1261 ctaccgatca tcgcgctcta ccgggcccag cgggcggtga agggactcac cctgctgccg
     1321 ggcgatccgc ggagagacat cgagctggcg gtgagtctcc tgagccggcg gcagcggccc
     1381 gacggtggca tcggctactg gagctcgagc gactggacca cgccgtggct cagcagctac
     1441 gccggggtga cgctgctcga ggcccggtcg gtcggtgtgg aggtggacga ctcggtgctg
     1501 gcgcggctgg ccggatacct ccgggagtcg ctcaagaacc cgcgggcggt gcgggcaccg
     1561 gtgatagggt actacgagca tgtgcaggcc agcctcagcg accaggtagc cgcggcggat
     1621 ttcctgagcc gttacggcaa gccggagctt ccggtcgaga atgaactgct ccgcaacgcg
     1681 gcccagctcg cgtgggaaga ccgggtgcgg ctggcggaga tgctggcgcg gcggaaggcg
     1741 tacaaggcgg cgcggagcct gctgcagcct acctgggagg cgaccaagat cgagggccgc
     1801 aaggcggtgg tgccggaaga aaccgtgacc tggcatcact acttcgattc acgcacccgg
     1861 cccaccgcgc gccttctcat cgccaccctg gcgatcgact cggcgcatcc cctcctggga
     1921 ccgctggtgg agacgctggt acagcagggg cgggcgggga acgggatcga tccctggaac
     1981 acccaggact atgccgccac ggtatcggcg ctggtggcgt tcgaccgggt ggtgaagggt
     2041 ggagcggcgc ggagcttctc ggtttcggcg ggtgggcgga cgttgttcac ccggagcgga
     2101 gggctgactc cactgccggc gccggcgacg ccaggcaagc ctgtgcctcg tccggtgccg
     2161 tcgatcgccg actcgtcgct cgcgctcacc ggcctcatca ccgacctggg tgacggcaag
     2221 aagggtctcc gggtctctct caactccccg ggaaccggct cgccgatcta ctactacctc
     2281 acggtcacgg aggtgcccaa ggctcggccg gtgaatccgg aagaccaggg gatcaaggtc
     2341 gagcgctggt acgagaagta cgacgcgccg acgccggtgg tgagcgtgcc ggcggggcaa
     2401 ctggttcggg tgcggctccg gatcacggtg ccttcgaacc gggagttcgt ggtggtggat
     2461 gacgccctgc ctgcgggact cgaggcggtg gacctgagtc tccgcaccgc gagcctctca
     2521 cccggccccg gtgtggacca gaagtcgcca tacctcacgc cggagcaggc cgagggtgac
     2581 gaaggcgatg gcgaaggggg cgacgccggg tatcagggtg acgagtggta ctacgggagc
     2641 tgggacagcg ggtggtggtc gcctttcgac cataaggaaa tgggcgacag ccgggtactc
     2701 tactcggcga cggtgctgtg gaaggggacg tacaccatga cgtatatcgc ccgcgcgacc
     2761 acgcccggag tgttcgtccg tcccccggcg catgcggagg agatgtacaa cccggcggtg
     2821 tatggccgga gcgatggcgg gttgttcacg gtgacggaga agtagatctc atgtccactg
     2881 cttcaccaca gaggcacaga gggcacagag aaccgcgaaa gaagaacggg tattctcctg
     2941 ttcttctctg tgtcctctgt gtctctgtgt tgatgtttct cgggggtgcg tggtgggtcg
     3001 cgaggccgct gccgccggag cttctcgcgc cggcccggca gcagagtctc accatcgagg
     3061 accggcacgg cgccctgctc aggagcaccc gcgccggtga cggcagtctc accagctgga
     3121 tcccgctcgc gaacatggat cccgacctcc cccgcgcgtt cgttgcggtg gaggaccggc
     3181 gattctatca gcaccacggc gtcgatgccc gggcggtggt ccgcgcggtg cgcgacaatg
     3241 tcactcacct ccgggtcgtt tccggcgcgt cgaccatcac catgcagctg gcgcggctca
     3301 tccatccgat tggtcgtggc tgggccgaca aggtggtgca ggcgctctgg gccctgcggc
     3361 tggaggccca tctcaccaag aacgaaatcc tggagcaata cctcaaccgg gttccgctgg
     3421 ggcagggcac cgtcggtgtg gacgcggcga tgcggctcta cttcggtggt tcaccgtcgg
     3481 aggcgagcct ggggcaggcg gcactgctgg cctccctcgc caaggcgccc tcgagccaga
     3541 acccgatggt cgatccgcgg cgggcgctcg aacggcgagc aaccgggctg gctgcccttc
     3601 gtcgcgaggg ctatctcgac cgggccgagg agctgagggc caggcaggag ccgctcctgg
     3661 gcgatgggcg gggccggccg ttcctggcgc cgcacttcac cagccgcctg ctcctctggg
     3721 ccgagtcggc ccaccggccg attgcgggag agtggcgcac ctcgatcgac ctgtcgcttc
     3781 agtccgagct ggaagaggag gtgcgtcaca ccgtcgaact gctcaaggat cagggtgccc
     3841 ggcagggtgc gctggtggtg ctcgacaatc agagcggcga agtcctggcc tgggtgggct
     3901 ctcccgattt ctggtcggac acgtcgggac aggtggacat ggtggtgagt ccccggcagc
     3961 cgggctcgtc gctcaagcca tttctgtacg ccctcgcgtt cgatcgcggg gtcaccgcgg
     4021 cgagtgtgct ggcagacatt tccaccacct accagaccgc gagcggcccg taccacccga
     4081 gaaactacga ccgccgctat cacggaccgg tgcgggcccg cgaggcgctg gcgagcagtt
     4141 acaacgtccc cgccgtcggt ctgaccgacc ggatcggcta cgcgactctg ctctacggtt
     4201 tgcgtcaggc gggattcgcc tccctgtcgc gttcggccga gcactatggg ctggggcttt
     4261 cgctcggcaa tggcgatgtc accctgctcg agctggccaa cgggtaccgc acgctggcga
     4321 acggcggcat ctggtcgccg gtcacctact gggccaccgc ggaggggcag gcctctcccg
     4381 actcggcacc gcggcgggtg gtctcccagc attcggcggc cctggcgctc gacatcctga
     4441 gtgacccggt ggcgcggatt cccggctttg gactggtcac cccgttcgac tggccgttcc
     4501 gcgccgcggc caagaccggg accagccgcc atttcacgga caactgggcg gtggccacca
     4561 ccgggcggtt caccgtagcg gtctgggtcg ggaatttcag cggccagccg atggaagggg
     4621 tgagcggcgt gtcgggcgcc gggccgctcc tgcaccgcgc ggtgctggtg acggcgaggc
     4681 actacgatcc cggtgatctg ctccgcccca ctgaggccgg gctggtgacg gccaggatct
     4741 gccgggtgtc ggggcaactc gccgggccgg actgtcccca gatgaccgaa tatttcgcgc
     4801 cgggcacgat tccacagacg acctgccgct ggcacctgaa cggggaagtg catctgccga
     4861 gcgagtacgg tgagtgggag gcgtcggtgc gggtcgtgtc atcccgagcg gagccaggga
     4921 tccctgcttc tgtcgcgctg aagatcaggg attcctcgga tgctccgcat cctcgtaatg
     4981 acagattcag gatcaccagt cctgagcggg gcgatgtcta ccggatcccg cccggcgtcg
     5041 aggggcggta cgccacgatc gcgctccgcg ccgcgggagg agccgcgggg cgggtgcgct
     5101 ggtacgtcga cggaaggcct acgccaggcg agcggtggag cctcacgccc gggcgacaca
     5161 tcctccgggc ggagagcgga acgttgtcgg acgaggttac cttcgtggtc gaatgagcct
     5221 tctccgacgg gaatcaccat gactctgccg cgccgcacac tcggaaccac cgatctctcc
     5281 attaccaccg tgggcttcgg ggcctgggcc gcaggcggcg gagactgggc cttcggctgg
     5341 ggaccacagg acgacgagga ttccctcgcc gcgatgcgcc gggcgctcga gttgggcgtc
     5401 aactggatcg acaccgccgc gatctacggg ctg
//
LOCUS       DATIFF010000010         1078 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1078062, whole genome shotgun sequence.
ACCESSION   DATIFF010000010 DATIFF010000000
VERSION     DATIFF010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1078062"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..961)
                     /gene="maeA"
                     /locus_tag="VLD58_00120"
     CDS             complement(<1..961)
                     /gene="maeA"
                     /locus_tag="VLD58_00120"
                     /EC_number="1.1.1.38"
                     /inference="COORDINATES: protein motif:HMM:NF010052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxaloacetate-decarboxylating malate
                     dehydrogenase"
                     /protein_id="HSB52721.1"
                     /translation="MPRPIDYIHDPRLNKGTAFTEDEREALGLRGLLPPRVVAPGEQE
                     ARVLENFRSKSSPLEQYIYLISLQDRNEHLFYRVVMDHIEEMLPIIYTPTVGEACRQF
                     GHIFRRPRGLYLCPEDRGRVSGILRHWPEAEVGIIVVTDGERILGLGDLGANGMGIPI
                     GKLSLYTACAGVDPALCLPLTLDTGTEREELLGDPLYLGRPERRIRGQAYDDLLEEMV
                     MGVQEVFPGALIQFEDFATENALTLLERYRDRVCCFNDDIQGTAAVTLAALTSACRIT
                     GQPLARQRVMFLGAGAAATGIANLIVAAKVRDGIPELEAQRQIA"
BASE COUNT          173 a          362 c          371 g          172 t
ORIGIN      
        1 gggcgatctg ccgctgtgcc tcgagttccg gtatcccgtc cctcaccttg gcggcgacga
       61 tgaggttggc gatacccgtg gccgcggccc cggcgccgag gaacatcacc cgctggcggg
      121 cgaggggctg accggtgatc cggcaggccg aggtgagggc tgccagggta accgcggcgg
      181 tgccctggat gtcgtcgttg aagcagcaga cccggtcccg gtagcgctcc agcagggtca
      241 gggcgttctc ggtggcgaag tcctcgaact ggatcagggc cccgggaaag acctcctgca
      301 cccccatcac catctcttcg agcaggtcgt cgtacgcctg gccgcgaatc cgccgctcgg
      361 gtcgcccgag gtagagcgga tcgccgagga gttcctcccg ctcggtcccc gtatcgagag
      421 taagcggcag gcagagcgcc gggtccacgc ccgcgcacgc ggtgtagagc gagagctttc
      481 cgatgggaat gcccatcccg ttggcgccca gatcgccgag gcccaggatc cgttccccat
      541 cggtgacgac gatgatgccg acctcggctt cgggccagtg gcgcaggatc ccggaaaccc
      601 gtccccggtc ttcgggacag agatacaggc cgcgcgggcg ccggaagatg tggccgaact
      661 ggcggcaggc ctcgccgacc gtcggggtgt agatgatcgg cagcatctcc tcgatgtggt
      721 ccatcaccac ccggtagaag agatgctcgt tccggtcctg caggctgatg agatagatgt
      781 actgctcgag gggggacgac ttgctgcgga agttctcgag cacccgggct tcctgctcgc
      841 cgggagccac cacccgcggc ggtaacagtc cgcgcaggcc cagcgcctcc cgctcgtcct
      901 cggtgaaggc cgtgcccttg ttgagccggg gatcgtggat gtagtcgatg ggtcgcggca
      961 tgctacaaca ttacccggcc gtccagcacc agcaccgcat cgccgaccgg caccaccggg
     1021 ttgaggtcca gttcccggat ctcggggaag tccgccgcca gccgcgagac ccggatca
//
LOCUS       DATIFF010000011         2858 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_616445, whole genome shotgun sequence.
ACCESSION   DATIFF010000011 DATIFF010000000
VERSION     DATIFF010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2858
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_616445"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..477
                     /locus_tag="VLD58_00125"
     CDS             <1..477
                     /locus_tag="VLD58_00125"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB52722.1"
                     /translation="LEHGYDLIFEMDADFSHDPRFLPTFLTEINDADLVIGSRYKTGV
                     NVINWPISRLLLSLGANQYARLVTGLPLADSTGGFKCFRRQVLEAIPLERVRSNGYAF
                     QIEMSYLAWKKGFRLKEIPIVFTDRVEGHSKMNRKIVREAVWMVWWLRLRSLGRAL"
     gene            474..1298
                     /gene="dapF"
                     /locus_tag="VLD58_00130"
     CDS             474..1298
                     /gene="dapF"
                     /locus_tag="VLD58_00130"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HSB52723.1"
                     /translation="MKGTVFYKMTGSGNDFVMLDGRSTAPDEWSRERIVRVCDRRAGV
                     GADGLVILSPEDGDAVRMAFFNSDGSRAAMCGNAALCSTRLAAHLELGPAEGMRLLTD
                     AGVVATRCVGDGDRAEIRLPDTLVPKPGPTIEPATGEHAIWLGCVGVPHLIVLVDDVR
                     AVDVVGRGRPLRYDPATGSDGANVNFIAAPKGAGEPWLIRTYERGVEGETLACGTGTV
                     AAGLALAGRAGKRLPLEFRSWGGEPLTVSASLRGEVATDVWLGGQGRLVFRGVWEN"
     gene            1350..2060
                     /locus_tag="VLD58_00135"
     CDS             1350..2060
                     /locus_tag="VLD58_00135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52724.1"
                     /translation="MRAFAFLSPLFVVVAAAALLGAVVRWALTDAGKRGRPGWAVALL
                     LVAAPVVGWLVWLALRPAQLDVWRRDPQGPPESRHGHLTFAACLALAWYNAGAMWIAQ
                     RVLLPLRALAGQADAYAYDARFATLMQAPAVTMFSLLLLVTALLLWTRPAEVPDWAVW
                     VGGLLEGVALGSSLSREAPILASLGREGFSDVLTRHVLAVSWLRTIAVTAHAVLLSWM
                     ALRVMAPKPLLRVGRWGG"
     gene            complement(2383..>2858)
                     /locus_tag="VLD58_00140"
     CDS             complement(2383..>2858)
                     /locus_tag="VLD58_00140"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSB52725.1"
                     /translation="SQALAAADQGNLPQASADLQRVIQTYSGTDAANEAVLALNQIRM
                     TSGQSELAAVNLSEFVARKPAPRFAAPAYGLLGQAQENAKKFAEAAAAYEQAAANAGL
                     GFVKASYLLNAGRAYRLAGKTQDAIRAYRTVVEKYPDAPAVNEAKVRLGEVAAGQ"
BASE COUNT          383 a          953 c         1020 g          502 t
ORIGIN      
        1 ctcgagcacg gctacgatct cattttcgag atggacgctg atttctccca cgacccgcgg
       61 ttcctgccga cgttcctgac ggagatcaac gatgccgacc tagtgatcgg ctcccggtac
      121 aagaccgggg tcaacgtgat caactggccg atctcgcggc tcctcctctc cctcggcgcg
      181 aaccagtacg cgaggctggt cacgggattg cccctggccg actcgactgg cggcttcaag
      241 tgctttcgcc ggcaggtgct ggaagcgatc ccgctggagc gggtacggtc gaacggttac
      301 gcgttccaga tcgagatgag ctacctggcc tggaagaagg gattccggct caaggagatc
      361 ccgattgtgt tcaccgaccg agtggagggg cacagcaaga tgaaccggaa gatcgtccgc
      421 gaggcggtgt ggatggtgtg gtggctccgt cttcggtcgc tggggagagc attgtgaagg
      481 ggaccgtgtt ctacaagatg accggctcgg ggaacgactt cgtgatgctc gacgggcgga
      541 gcacggcgcc agatgagtgg tcgcgggagc gcattgtccg ggtctgcgac cgccgggccg
      601 gcgttggcgc cgacggcctc gtcattctct cgcccgagga cggcgacgcg gtccggatgg
      661 cgttcttcaa ctcggacggc tcccgcgccg ccatgtgcgg caacgccgct ctctgcagca
      721 cccggctcgc cgcccacctg gagctggggc cggctgaggg gatgcggctc ctcaccgacg
      781 ccggcgtggt ggccacccgg tgtgttggcg acggggaccg cgccgagatc agactgcccg
      841 acacgctcgt gcccaagccc gggcccacga tcgagccggc gaccggggag catgcgatct
      901 ggctcggctg cgttggcgtg ccgcacctca tcgtcctcgt ggacgacgtg cgggccgtgg
      961 acgtcgttgg tcgagggcgt ccgctgcggt acgatccggc gaccggctcc gacggcgcga
     1021 acgtcaattt catcgccgcg ccgaaggggg cgggcgagcc gtggctgatc cgcacctacg
     1081 aacgcggagt cgagggggag acgctggcct gcggcaccgg caccgtggcc gcgggactcg
     1141 cgctcgccgg gcgcgccggc aagaggctcc ccctcgagtt ccgcagctgg ggcggcgagc
     1201 cgctgacggt cagcgcctcg cttcgcggcg aggtggcgac cgacgtgtgg ctcggcgggc
     1261 agggacggct cgttttccgg ggggtctggg agaactagcc cgtcggcagc gggcatggcg
     1321 tcctctcccg ggtgggcgta tcctagggcg tgcgagcctt cgccttcctg tcgcccttgt
     1381 tcgtcgtggt cgccgccgcc gcgctgctgg gcgcggtggt ccgctgggcc ctgaccgacg
     1441 ccgggaagcg gggtcgtccg gggtgggcag tggcgctcct cctggttgcc gcgccggtgg
     1501 tcgggtggct cgtctggctc gccctgcggc ccgcccagtt ggacgtctgg cggcgcgacc
     1561 cccagggccc gcccgagagc cgccatgggc acctcacttt cgcggcctgc ctcgcgcttg
     1621 cctggtacaa cgccggcgcc atgtggattg cgcaacgggt gctgctgccg ctccgcgctc
     1681 tggcggggca ggcagacgcc tacgcctacg atgcccgctt cgcgacgctg atgcaggcgc
     1741 cggccgtcac gatgttctcg ctactgctcc tggtgaccgc actgcttctc tggactcgcc
     1801 cggcggaagt gccggattgg gcggtgtggg tcgggggcct gctcgagggc gtggcacttg
     1861 gctcgagcct gagccgggag gccccgatcc tggccagcct gggccgggaa ggattttccg
     1921 acgtcctgac ccggcatgtg ctcgcggtga gctggctgcg gacgatcgcc gtcacggctc
     1981 acgccgtgct cctgtcctgg atggcgcttc gggtcatggc gccgaagccg ctgctgcggg
     2041 tggggaggtg ggggggctga accggtcggc ttggcggcgt gacctttctc tcgaccccac
     2101 cgtcggatcg atcctccgtc cgcatgactc gtgggaaatc aacctaacca ccacggtgaa
     2161 agggagttag caccaatcgg atgcggttct ccacagttat ccccagcgcg agttaacata
     2221 atacatctta tacgtcattg tggcgatctc gcgtctcgcc cgcgatgaca cttccagacc
     2281 aaccgacccc cgaacaagag cggccccggc actgaggtgc cggagccgca tccgaacgcc
     2341 agagagccac ggccctccga accctgggcc tgcctcgcgc ccctactggc ccgccgcgac
     2401 ttcgcccagc cggaccttcg cctcgttcac cgctggcgcg tcgggatact tctcgacgac
     2461 cgtccgatag gcccggatgg cgtcctgggt cttgcctgca agccggtaag ctcggccggc
     2521 gttcaggagg tagctggcct tcacgaaccc gagcccggca ttcgcggcgg cctgctcgta
     2581 ggcggcggcc gcctccgcga acttctttgc gttctcttgc gcctgaccca ggaggccgta
     2641 agccggcgcg gcgaagcggg gggccggctt ccttgccacg aactcgctca agttgacggc
     2701 ggccagctcg ctctgaccgc tggtcatgcg gatttgattg agggcgagga cggcctcgtt
     2761 ggccgcgtcc gtgccgctgt atgtctggat gacccgttgg aggtcggcgg aggcttgtgg
     2821 caggttcccc tggtcggccg cggccagcgc ctgggagt
//
LOCUS       DATIFF010000012         4636 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2001565, whole genome shotgun sequence.
ACCESSION   DATIFF010000012 DATIFF010000000
VERSION     DATIFF010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4636
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2001565"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1264
                     /locus_tag="VLD58_00145"
     CDS             <1..1264
                     /locus_tag="VLD58_00145"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSB52726.1"
                     /translation="IGGWLDDDPADSLYKAARAALNASNYRNAAELFRRIRDEQPKSR
                     YVADSYYWEAFARYRSGGSDDLREARRLLAEQQSRYPKAATSGDAAALRTRVEGQLAQ
                     LGDADAARRVSVAAESAAPSRNTDGCTEDEDDTRIAALNALLQIDADRAIPILKKVLA
                     RREKCSEVLRRKAVFLVSQKRTDETESILLDAARQDPDGEVREQAVFWLSQVGTERSV
                     NALDSILQFSKDPELQKKAVFALSQTKIARAQQVIRDLAAKEGADEEVREQAVFWLGQ
                     SRDAGNADFLRTLYGKSGNTDLKEKILFSLSQIHSPASDQWLLDIAQNSKEDIELRKK
                     ALFWAGQSRTSSADLVALYDKMKESEMREQLIFVYSQRREPAAVDKLMQIAKTDPDKE
                     LKKKAIFWLSQSRDPRAAEFLLQVIEQP"
     gene            1323..2120
                     /locus_tag="VLD58_00150"
     CDS             1323..2120
                     /locus_tag="VLD58_00150"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSB52727.1"
                     /translation="MKYIPAILLAVAAAATSPANPVAAQGVAQKVTGAPDGEVRMSFA
                     ARPDVCGDGVNNIRWSGRHRTVRDDDDDVVYQNGDCPCVGGPVRVVFRVADHRVSRVK
                     TVVGGAWRADARAVDLGTVSTRDAVAALLAIAQDGKNGGGENAIFPATLADSVTVWPQ
                     LLTIARNNQVPQDSRKQAVFWLSQVASDSATSGLADLAGSDKEGDEIRKQAVFALSQR
                     PKDEGVPALIKVAKSRTSAEVRKSALFWLGQSEDPRALALFEDILSH"
     gene            2210..3301
                     /locus_tag="VLD58_00155"
     CDS             2210..3301
                     /locus_tag="VLD58_00155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52728.1"
                     /translation="MNTRPFPGRLALLLPAALIACSSAPPPAEPLRLAAVGDTVIAPY
                     GDVTDAAWLGGARWVVIAPQDQAVAVADFTTRKLAPFAGNRSKELEQPFHLFRAGDSI
                     YVADWQRRRLTGWSLAGGLGSSVGAVDALRGALPKARDAAGNWYFELRPSPGLDGSGN
                     RDSAAIVRTRPDLSGADTVARLAPLDLAEVVTEGRRRLERRLLSGQDRWGVLPDGSLW
                     VARVAQNRIDWRTPDGKTHLGRDLPDAVLPITENDRQLFLRKFDAALRPTVQQIPFAA
                     IKPPFDNAFTAALGPVWVVKNRAIGDTVRNYQIIGRDGELVRTASHPGLGHILALGDS
                     VALVAEPFEGGMRLLEYRLPAPSPAPVTP"
     gene            3330..4451
                     /locus_tag="VLD58_00160"
     CDS             3330..4451
                     /locus_tag="VLD58_00160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52729.1"
                     /translation="MTVHAPVARATILLLVLSACADAPTPVTVLDQPEFTVDHTFKQV
                     SNVVELTDGRLALAELKDKTFIFVNPASGETSLVGEHSDTIKPNDPAAGKHRLPGYVL
                     HFGGDTVGLVDFGAQRTTLWNEKGEFLSVMPGAGVGGYNQPLAYDAKRNGYKEDYRSV
                     LGGLEPGQELEFDSLSVLRITPGDTVADTVAHLKLPAWGRGQFGEQQKIVSTIFSGRD
                     LFGVLPDGSMWVARASNNAVDWRAPDGSWTRGPSRPFDKIVVPQEEKDAFLEKLRVQM
                     AGMGAPAGIELSYPFADEKPPFGAGLTNPAGEVWLQRSRAWADSVPVWDVVGKDGKQV
                     RTVQLPRNASLAGFGPGGKVYVVLREGEERQKIARYVVK"
BASE COUNT          757 a         1590 c         1603 g          686 t
ORIGIN      
        1 gatcggcggc tggctggacg acgatccggc agactcgctc tacaaggcgg cgcgcgcggc
       61 cctcaacgcc tccaactacc ggaacgccgc cgaactcttc cgccggatcc gggacgagca
      121 gcccaagtcg cgctatgtgg ccgacagcta ctactgggaa gcgttcgccc gctaccgcag
      181 cggcggcagc gatgacctgc gcgaagcgcg ccggctgctg gccgagcagc agagccggta
      241 tcccaaggcc gcgaccagcg gcgatgcggc cgcgctccgc acccgggtgg aaggccagct
      301 ggcgcagctg ggcgacgccg acgcggcccg ccgggtatcg gtggccgcgg agtcggcggc
      361 gccttcccgc aacaccgacg gctgcaccga ggatgaagac gacacccgga tcgcggccct
      421 caacgcgctg ctccagatcg acgccgaccg cgccatcccg attctcaaga aggtgctggc
      481 ccggcgggag aagtgctccg aggtgctgcg ccgcaaggcg gtgttcctgg tctcccagaa
      541 gcggaccgac gagaccgagt cgatcctgct cgacgccgcg cggcaggatc ctgacggcga
      601 ggtgcgggag caggcggtgt tctggctctc gcaggtgggg accgagcgct cggtgaacgc
      661 gctcgactcg atcctccagt tctccaagga cccggagctg cagaagaaag cggtgttcgc
      721 gctgtcgcag accaagatcg cccgggcgca gcaggtgatc cgcgatctcg cggcgaagga
      781 aggggcggac gaagaggtgc gggagcaggc ggtcttctgg ctggggcagt cgcgtgacgc
      841 cggcaacgcc gatttcctgc ggacgctcta cggcaagagc ggcaacaccg atctcaagga
      901 gaagatcctc ttctcgctct cgcagatcca ttcgccggcg agtgaccagt ggctgctcga
      961 tatcgcgcag aacagcaagg aagacatcga gctccggaag aaggcgctgt tctgggccgg
     1021 ccagtcccgc acctcgtcgg ccgacctggt ggcgctctac gacaagatga aggaaagcga
     1081 gatgcgggag cagctgatct tcgtctactc ccagcggcgc gagccggcgg cggtggacaa
     1141 gctgatgcag atcgcgaaga ccgacccgga caaggaactc aagaagaagg cgatcttctg
     1201 gctctcgcag agccgggatc ccagggcagc ggagttcctg ctgcaggtga tcgagcagcc
     1261 gtaggcggca aggcggcaaa gcggcacggc ggccagactg gcaacccttg ggaggacgac
     1321 cgatgaagta catccctgca atcctgctcg ccgtggccgc ggccgccaca tcgcccgcca
     1381 accctgtcgc ggcccagggc gtcgcccaga aggtcaccgg cgcccccgac ggcgaggtgc
     1441 ggatgagttt cgccgcccgg cccgatgtct gtggcgacgg cgtgaacaac atccgctgga
     1501 gcggtcggca ccgcaccgtc cgggacgatg acgacgatgt ggtctatcag aacggcgact
     1561 gcccctgcgt cggtggcccg gtgcgggtgg tgttccgggt ggccgatcac cgggtgagcc
     1621 gggtgaagac ggtggtcggc ggcgcctggc gggccgacgc cagggcggtg gacctgggca
     1681 ccgtctcaac ccgggatgcc gtcgccgcgc tgctggcgat tgcgcaggac ggaaagaatg
     1741 gcggagggga gaatgccatc ttccccgcca ccctcgccga ctcggtgacc gtgtggcccc
     1801 agctcctgac catcgcgcgg aacaatcagg tgccgcagga tagccgcaag caggcggtgt
     1861 tctggctgag ccaggtcgcg agcgactcgg ccacctcggg tctcgcggat ctcgcgggga
     1921 gcgacaagga aggcgacgag atccggaagc aggcggtctt tgcgctctct cagcgcccga
     1981 aggacgaagg ggtccccgcg ctcatcaagg tggcgaagag ccggaccagc gccgaagtgc
     2041 ggaagtcggc cctgttctgg ctgggccagt cggaggatcc ccgggccctg gcgctgttcg
     2101 aggacattct ctcccactga ccgacccgac gtaccgggtg ggttcgggca tcccggaccc
     2161 accccgcagg acccccgccg cttacccctc ccgttacatt tccgccctca tgaacacccg
     2221 cccgttcccg gggcgcctgg cgttgctcct gcccgcggcg ctcattgcct gctcctccgc
     2281 gccgcctccg gccgaaccgc tccggcttgc ggccgtcggc gataccgtga ttgcgccgta
     2341 cggcgacgtc accgacgccg cctggctcgg cggggcccgc tgggtggtga tcgcgccgca
     2401 ggatcaggcg gtcgcggtag cagacttcac cacccgcaag ctcgcaccct tcgcgggcaa
     2461 caggagcaag gagctggagc agccgttcca cctcttccgg gcgggcgatt ccatctatgt
     2521 cgccgactgg cagcgacgcc gcctcaccgg ctggtccctc gccggcggtc tgggctcctc
     2581 ggtcggcgcg gtcgatgccc tccgcggcgc actgcccaag gcccgcgatg ccgcgggcaa
     2641 ctggtacttc gagcttcggc cctcgcccgg cctcgatggc agcggcaatc gtgattcggc
     2701 cgccatcgtc cgcacccggc ccgacctgag cggcgcggat accgtcgcgc ggctggcccc
     2761 gctcgatctc gccgaggtgg ttaccgaggg acggaggcgg ctggagcgga gactgctctc
     2821 ggggcaggat cgctggggcg tgctacccga cggctctctc tgggtggccc gggtggccca
     2881 gaaccggatc gactggcgca ctcccgacgg caagacgcac ctcggccgcg atctgccgga
     2941 cgcggttctc ccgattaccg agaacgaccg gcagctgttc ctccggaagt tcgacgccgc
     3001 gctccgccct accgtgcagc agatcccctt cgccgcgatc aagccaccct tcgacaacgc
     3061 cttcaccgcg gcgctgggtc cggtgtgggt ggtgaagaac cgcgccatcg gcgacacggt
     3121 gcggaactac cagatcatcg ggcgggacgg cgagctggta cggacggcgt cgcaccccgg
     3181 cctgggacat atcctcgccc tgggcgacag tgtcgcgctc gtcgccgaac ccttcgaagg
     3241 cgggatgcgg ctgctcgagt accgcctgcc ggcaccatcg cccgcccccg ttacaccctg
     3301 acgtcgttgc ccttttcgga gtgaactcga tgacggtgca tgccccggtg gcgcgagcca
     3361 ccatcctcct gctggtcctc tcggcgtgcg cagatgcgcc gacgcccgtc acggtgctcg
     3421 accagcccga gttcactgtc gaccatacct tcaagcaggt gagcaacgtg gtcgagctca
     3481 ccgatggccg cctggccctg gcggagctca aggacaagac cttcatcttt gtgaacccgg
     3541 cctcgggcga gacctcgctc gtcggggaac acagcgacac catcaagccc aacgatcccg
     3601 ccgccggcaa gcatcgcctc cctggctacg tcctgcactt cggcggcgac acggtggggc
     3661 tggtggactt cggcgcccag cgcacgaccc tgtggaatga gaagggggag tttctctcgg
     3721 tgatgccggg cgccggcgtg ggcggctaca accagccgct ggcatacgac gcgaagcgga
     3781 acgggtacaa ggaagactac cgctccgtgc tgggcggact ggaaccgggc caggagctcg
     3841 agttcgacag tctgagcgtg ctcaggatca cccccggtga cacggtggcc gacaccgtcg
     3901 cccacctcaa gctgccggcg tggggccgcg gccagttcgg ggaacagcag aagatcgtct
     3961 cgaccatctt ctccggccgc gatctcttcg gcgtgctgcc cgacggctcg atgtgggtgg
     4021 cgcgggcctc gaacaatgcg gtggactggc gcgcccccga cggcagctgg acccgcggcc
     4081 cctcccgccc cttcgacaag atcgtcgtgc cccaggaaga gaaagacgca ttcctcgaga
     4141 agctccgggt ccagatggca gggatgggcg cgcccgccgg gatcgaactc tcctatccct
     4201 ttgccgacga gaagccgccc ttcggggccg gcctcaccaa cccggccggc gaggtctggc
     4261 tccagcgctc acgggcgtgg gccgattcgg tgccggtctg ggatgtggtg gggaaggacg
     4321 gcaagcaggt gcgcacggtg cagctgccga ggaacgcgtc gctcgccggc ttcggcccgg
     4381 gcggcaaggt gtacgtggtg ctgcgcgagg gtgaggagcg gcagaagatt gcgcggtatg
     4441 tggtgaagtg aggtctagag gtctagaggt ctagaggtct agaggtctag ccgaaattcg
     4501 tgggatgacg cgccaagggt ccagcaccct cgacccgagc gccacgctgg ggaaaatcag
     4561 gcacccttcg cctggctcgg catgaccggt gcgtcaccgg cttgctcccc catccattcc
     4621 gcggccggtt cccccg
//
LOCUS       DATIFF010000013         2087 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1498, whole genome shotgun sequence.
ACCESSION   DATIFF010000013 DATIFF010000000
VERSION     DATIFF010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1498"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1249
                     /locus_tag="VLD58_00165"
     CDS             <1..1249
                     /locus_tag="VLD58_00165"
                     /inference="COORDINATES: protein motif:HMM:NF020048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HSB52730.1"
                     /translation="EDYRLMIDEVIDFLEGRTVDVRGKVREAMLAASGRQDYERAGLL
                     RDQLKWLEQIESPAGIEVLGTGDADVLGYARDGDDAVGVLMRVREGRVVARDHAFLEN
                     LADETDDRILEFLLVRSYVPMEGRVRRLVLPFPPADVELLQEILPETEWNVPQRGTAR
                     RWLDLADQNARHLMESLRIESFETDERAGDPVYALGRDLGLNVVPRSMICVDISTNQG
                     RDTVGSLVWFEAGRPRKSEYRKFRIKGPGQQDDFAAVHEVVTRFLTRRQEEQKPLPDL
                     IVIDGGKGQLSAAVEAATVLGVTEIPIISLAKKEEEVFLPGRSESIRLPRRSPSLRLL
                     QRIRDEAHRFGVAYNRKRRTQRTITSALLDIPGVGPNRRRVLLERFGSLAGVKSATAA
                     EIASLPGFSSKLADRILGVLSER"
     gene            1267..1542
                     /locus_tag="VLD58_00170"
     CDS             1267..1542
                     /locus_tag="VLD58_00170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52731.1"
                     /translation="MSRAFVKEDRDEVPERYDLPPRDDPAYPDAAAWALLEGANRGDS
                     LGAERATGYRWGDAALRPNVERILGYARQKGDDRLEQLAERYLNTES"
     gene            1631..>2087
                     /locus_tag="VLD58_00175"
     CDS             1631..>2087
                     /locus_tag="VLD58_00175"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HSB52732.1"
                     /translation="MDWHLECSACGNRRGPEGLPTVCDQCGQPWLVRYPDRPAPSLTA
                     RAEVRRGHGMWRFRPFLPLEPGESPITLGEGDTPLLECRRLGERVGIADLWVKDEAAN
                     PTGSFKARGLSAAVTRAVAAGASKLVIPTAGNAGVAAAAYAARAGASVRV"
BASE COUNT          334 a          721 c          706 g          326 t
ORIGIN      
        1 ggaagactac cggctgatga tcgacgaggt gatcgacttt ctcgaagggc gcacggtcga
       61 cgtgcggggc aaggtgcgcg aggccatgct ggccgcgagc gggaggcagg actacgagcg
      121 ggctggcctc ctccgcgatc agctcaagtg gctggagcag atcgaatcgc ccgccggcat
      181 cgaagtgctg gggaccgggg acgcggatgt gctgggctat gcccgcgatg gcgacgacgc
      241 ggtgggcgtg ctcatgcggg ttcgcgaggg ccgggtggtc gcccgggatc atgccttcct
      301 cgagaacctg gccgacgaga ccgacgaccg gatcctcgag ttcctcctgg tgcgctccta
      361 cgtgccgatg gaaggccggg tccggcgcct ggtgctcccg ttcccgcctg ccgacgtgga
      421 gctcctccag gagatcctgc ccgagaccga gtggaacgtc ccgcagcggg gcaccgcccg
      481 gcgctggctc gacctcgccg atcagaacgc ccggcacctg atggaaagtc tccgcatcga
      541 gtcgttcgaa accgacgagc gggccggcga tcccgtctat gccctggggc gggacctcgg
      601 cctgaacgtg gtaccgcgca gcatgatctg tgtcgacatc tcgaccaacc agggacgcga
      661 taccgtgggc tcgctggtct ggttcgaggc cggccggcca aggaagagcg agtaccgcaa
      721 gttcaggatc aagggacctg ggcagcagga cgatttcgcc gcggtgcacg aggtcgtgac
      781 ccgattcctg acccgccgcc aggaagagca gaaacccctg ccggacctga tcgtgatcga
      841 cggcggcaag ggtcagctca gtgccgcggt cgaggcggcc accgtgctcg gcgtgactga
      901 gatcccgatc atcagcctcg ccaagaagga agaggaggtc ttcctcccgg gcaggtccga
      961 gagcatcagg cttccacgcc ggagtccgtc gctccgcctc ctgcaacgga tccgggacga
     1021 agcccaccgg ttcggggtgg cctacaaccg gaaacggcgc acccaacgca ccatcaccag
     1081 cgccctgctc gatatccccg gcgttggacc caaccggcgg cgggttctgc tggagcggtt
     1141 cggcagcctc gcgggggtca agagcgccac cgcggccgaa atcgccagcc tccccggctt
     1201 ctccagcaag ctggccgacc gcatcctcgg cgtcctctcc gagcggtagc ctcgctatct
     1261 tggggcatgt cgcgcgcctt cgtgaaagag gatcgggacg aggtccccga gcgatacgac
     1321 cttcctcccc gtgatgaccc ggcgtatccc gacgctgccg cctgggccct gctcgaaggt
     1381 gccaaccggg gcgattcgct cggggccgaa cgcgccaccg ggtatcgctg gggtgacgcc
     1441 gccctccgcc ccaacgtcga gcgaattctc ggatacgcgc gccagaaggg cgatgaccgc
     1501 ctggaacaac tggccgagcg gtacctgaac accgaaagct gaaggcaagc gagagatttc
     1561 tcccttctcc cttctccctt ctccccttct tacttctcac ttcttacttc tcacttctca
     1621 cttctccccc atggactggc acctcgagtg ctctgcatgt ggcaatcgcc gcgggccgga
     1681 aggcctgccg accgtctgcg accagtgcgg ccagccctgg ctggtgcgct atcccgatcg
     1741 gccggcgccg agcctcacgg cgcgcgccga ggtgcggcgg gggcacggca tgtggcggtt
     1801 tcgcccgttt ctgcccctcg agccgggaga atccccgatc accctcggcg agggcgacac
     1861 gccgcttctc gagtgccgcc ggctgggtga gcgggtcggc atcgccgatc tctgggtgaa
     1921 ggacgaggct gccaatccca ccgggtcctt caaggcccgg ggactgagcg cagccgtgac
     1981 ccgggcggtg gccgccgggg ccagcaaact tgtgatcccg accgcgggca atgccggcgt
     2041 ggccgcggcg gcctacgccg cccgggccgg cgccagcgtc agagtct
//
LOCUS       DATIFF010000014         1231 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_770828, whole genome shotgun sequence.
ACCESSION   DATIFF010000014 DATIFF010000000
VERSION     DATIFF010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1231
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_770828"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..351
                     /locus_tag="VLD58_00180"
     CDS             <1..351
                     /locus_tag="VLD58_00180"
                     /inference="COORDINATES: protein motif:HMM:NF020119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase C-terminal
                     non-catalytic domain-containing protein"
                     /protein_id="HSB52733.1"
                     /translation="DTLPDRPAMGGYELMVTGEIMRGRYRAGWDHPTKIPPSAVTPFT
                     VDLHQQSYTFRRGHRIMVQVQSTWFPLYDRNPQTFVPNIFTARAEDYRAQIHRVYRTA
                     RYPSSVEIDVVPSR"
     gene            complement(309..527)
                     /locus_tag="VLD58_00185"
     CDS             complement(309..527)
                     /locus_tag="VLD58_00185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52734.1"
                     /translation="MQKLVTWAVQVGMAMALAMGATLAKGRGTSLLLAGMAGGAAIAS
                     VLGLWMRPPEALARPQRDGTTSISTLEG"
     gene            complement(595..>1231)
                     /locus_tag="VLD58_00190"
     CDS             complement(595..>1231)
                     /locus_tag="VLD58_00190"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSB52735.1"
                     /translation="LAWDAGCGSGQLSVALAERFARVIATDASDQQLAQAIAHPRVEY
                     RRVSAEASGIPSAAVDLATAAQAVHWFDRPAYYQEVRRVCRPGALIALVTYNLFRITP
                     ELDRIIDHFYWQTIWQYWPPERRLVEAGYRTLDFPFAELSAPPLEIQAEWTLPHVLGF
                     VSTWSALRGLERDRGSRVVEEFARELSGVWGPADTRRPVRWELAVRLGRVS"
BASE COUNT          212 a          459 c          395 g          165 t
ORIGIN      
        1 gacaccctcc ccgaccggcc cgccatgggc gggtacgagc tgatggtgac gggggagatc
       61 atgcggggac gctaccgggc ggggtgggat caccccacga agatcccacc gagcgcggtg
      121 acgccgttca cggtggacct gcaccagcag tcctacacct tccgcagggg acaccggatc
      181 atggtccagg tgcagagcac gtggtttccc ctctacgacc ggaacccgca gaccttcgtc
      241 ccgaacatct tcaccgcgcg ggctgaggat taccgggcac agatccaccg ggtgtaccgg
      301 accgcgcgct atccctcgag cgtggagatc gacgtggtgc cgtcccgctg agggcgcgcg
      361 agcgcctcgg gcggccgcat ccacaaaccg agcacgctgg cgatcgccgc cccgcccgcc
      421 atgccggcga gcagcaggga ggtcccacgc cccttggcga gcgttgcgcc cattgccagg
      481 gccatcgcca tccccacctg cacggcccag gtcacgagct tctgcacctt cccactcccg
      541 ttctggtgtc actccagaat cgcccgaggc gacgggaagg ttcccggcgg ttcgtcagga
      601 aacgcgcccc agccggacgg cgagctccca acgtaccggg cgccgcgtat ccgccggtcc
      661 ccagacgcct gacaactcac gggcaaactc ctcgaccaca cggctgcccc gatcgcgctc
      721 cagccctcgc agcgccgacc acgtactcac gaaacccagc acgtgcggca gggtccactc
      781 cgcctggatc tcgagcggcg gcgcagacag ctcggcgaac ggaaagtcga gcgtgcggta
      841 gccggcctcg acgagccgcc gttccggcgg ccagtactgc cagatcgtct gccagtagaa
      901 gtgatcgatg atccggtcca gctcgggcgt tattcggaac aggttgtagg tcacgagcgc
      961 aatcagggcg ccgggccggc acacgcggcg aacctcctgg tagtaggccg gccggtcgaa
     1021 ccagtgcacc gcctgcgccg ccgtcgcgag atccacggcg gcggagggaa tcccggacgc
     1081 ttccgcactg acccggcgat actccacccg tggatgggcg atagcctgcg ccagctgctg
     1141 gtcactggcg tccgtggcga tcacccgggc gaagcgctcc gccaaggcca ccgacagctg
     1201 cccggagccg caccccgcgt cccaggccaa t
//
LOCUS       DATIFF010000015         1442 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_617059, whole genome shotgun sequence.
ACCESSION   DATIFF010000015 DATIFF010000000
VERSION     DATIFF010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1442)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1442)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1442
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_617059"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..900)
                     /gene="fliF"
                     /locus_tag="VLD58_00195"
     CDS             complement(<1..900)
                     /gene="fliF"
                     /locus_tag="VLD58_00195"
                     /inference="COORDINATES: protein motif:HMM:TIGR00206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009431 - bacterial-type flagellum basal
                     body, MS ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body MS-ring/collar protein
                     FliF"
                     /protein_id="HSB52736.1"
                     /translation="MLDGVRRMSGTRRFLTFGVLLAALALIWVVTRYGSAPSMVPLYS
                     GVDLREVSGMTDALTKAGIQFELAGGGTTIMVPEASAARARVALAKVGLPSRGGQIGN
                     EIFDRPSLGLTSDELRTRERLALEGELSRTIGELDGIDHATVHLALPPESPLRRLERP
                     AKASVVLTLRNGKTLSPESVQGITYIISNAVPQLPSDQVAVLDSEGHLLSTPNDGSVR
                     GLTSRQLEMQRSVEEYLQHNAERMLATALGSGEARVQVAAKLNFEQVDKTVETYNPDG
                     AVLQNEQRSEVTGADSLAGGSSTV"
     gene            complement(938..1240)
                     /gene="fliE"
                     /locus_tag="VLD58_00200"
     CDS             complement(938..1240)
                     /gene="fliE"
                     /locus_tag="VLD58_00200"
                     /inference="COORDINATES: protein motif:HMM:TIGR00205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HSB52737.1"
                     /translation="MSSPIRPDGPRLTPLDRVLDRFEPPTSGPSFADTLTRVVNDTQQ
                     MQEDASNIIGRFVRGEPVELHQVMAASEEAGIALEFLVEMRNKITDAYRTVMNMQI"
     gene            complement(1244..>1442)
                     /locus_tag="VLD58_00205"
     CDS             complement(1244..>1442)
                     /locus_tag="VLD58_00205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52738.1"
                     /translation="AGKPSTLDPRPSNQSSGIPLSAVLNDEERAYFDQIEAMGPITYG
                     PSRKGGLVPDAPRGLRLDVRG"
BASE COUNT          205 a          484 c          503 g          250 t
ORIGIN      
        1 caccgtgctg ctgccgccgg cgagactgtc ggccccggtc acctcgctcc gctgctcgtt
       61 ctggagcact gcgccatcgg ggttgtaggt ctcgaccgtc ttgtcgacct gttcgaagtt
      121 gagcttggcg gccacctgga cccgggcctc gcccgatccc agcgccgtgg ccagcatccg
      181 ctcggcgttg tgctgcaggt attcctcgac cgagcgctgc atctcgagct ggcggctggt
      241 caggccgcgg accgagccgt cgttcggggt cgagaggagg tgcccctcgc tgtcgagcac
      301 cgcaacctgg tcgctcggca gctggggcac cgcgttggag atgatgtagg tgatgccctg
      361 caccgattcc ggagaaagcg tcttgccgtt gcggagcgtc aggaccaccg acgccttggc
      421 gggacgctcg agccgccgga gcggactctc gggcggcagg gccaggtgca ccgtggcgtg
      481 gtcgattccg tccagctcac cgatggtacg ggagagttcg ccctcgagcg ccagccgttc
      541 gcgggtgcgg agttcatccg aggtcaggcc caggctgggc cggtcgaaga tctcgttgcc
      601 gatctggcca ccccggctcg gcagcccgac cttggccagc gccacccggg cccgggcggc
      661 ggacgcctcg ggcaccatga tggtggtgcc gccacccgcc agctcgaact ggatgccggc
      721 cttggtgagg gcgtcggtca tccccgacac ttcccggagg tccacgccgg agtagagcgg
      781 gaccatcgac ggggccgagc cgtagcgggt cacgacccag atcagggcca gcgccgccag
      841 cagcacgccg aatgtgagga accgccgggt accgctcatc cgtctgactc cgtccagcat
      901 ggccgggggt atagcgttgg tcatgaactt tcaggggtca gatttgcatg ttcatcaccg
      961 tgcggtatgc atcggtgatc ttgttccgca tctcgaccag gaattcgagc gcgatgccgg
     1021 cttcttcgct ggccgccatc acctggtgca gttccaccgg ctcgccccgc acgaagcggc
     1081 cgatgatgtt gctggcgtct tcctgcatct gctgggtgtc gttcaccacc cgggtcagcg
     1141 tatccgcgaa ggacggcccg ctggtcggcg gctcgaaccg gtcgagtacc cggtcgagcg
     1201 gcgtgagacg cggaccgtcg gggcggatcg gcgaactcat ggatcagccc cggacatcga
     1261 gccggagccc gcgcggcgcg tccggcacca ggccgccctt gcggctcgga ccgtaggtga
     1321 tcggacccat cgcctcgatc tgatcgaagt aggcccgctc ctcgtcgttg agcaccgcgc
     1381 tcagcggaat cccggaggac tggttcgagg gtcgagggtc gagggtcgag ggcttacccg
     1441 cg
//
LOCUS       DATIFF010000016         1734 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_617095, whole genome shotgun sequence.
ACCESSION   DATIFF010000016 DATIFF010000000
VERSION     DATIFF010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1734
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_617095"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(129..875)
                     /locus_tag="VLD58_00210"
     CDS             complement(129..875)
                     /locus_tag="VLD58_00210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52739.1"
                     /translation="MSARDWRAARAGEAHAATTRHTNTPESFIVGVGASGALLAGAAV
                     VFVTLVGLVSFNLWPSSRDASIYGNVELSAAPQAGAARSSAAPVSAATGQLASSGGAT
                     VARGSGGGGNGGGHGGGKQGSSGGGLRSGPAPTPPSVSPGTPSTGTGDSGTPGNAGRE
                     PSSGGSSGQPNNPGQLTEQKQGGDGRNGSAGKSPITPPSQVSAQGDQTSIPGGERINR
                     GRGHDQPASGSNQPITYGSQSSGRGQGRWR"
     gene            complement(978..>1734)
                     /locus_tag="VLD58_00215"
     CDS             complement(978..>1734)
                     /locus_tag="VLD58_00215"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HSB52740.1"
                     /translation="TVLLQAHGFDDLLARTQYLQNLQHQDNDIVSRVRELRNQMQVTV
                     NTVRSARDQIAARKAELEATRARLEQRTSELATARRKQHATLVQVRKQQDNLEGDLND
                     ISQKIAEQLAASTGALPAGPIRVAGHGLIWPVSGPITSGYGPRNIGGGYEFHPGIDIG
                     VPTGTPIRSAAAGTVSIAGPEGGYGNYTCIDHGGGLSTCYGHQERFLVSSGQQVAQGQ
                     VIGLSDCTGYCFGPHVHFEVRINGQTTDPLGYL"
BASE COUNT          213 a          611 c          618 g          292 t
ORIGIN      
        1 catcgcccct gggggcgcgc acaccaccgt ccagcacgat cgcgagctgc agtcaatggc
       61 gctgcgctgg ctcgagcgca agctcgctcc cgccgagccg gcgcgctagc gcgtcccggc
      121 gtgcttggct agcgccagcg gccttggcca cgcccggagg actggcttcc gtacgtgatg
      181 ggctggttcg acccggaggc cggttggtcg tgtcccctgc cgcgattgat gcgctctcct
      241 ccggggatcg aggtctgatc cccctgcgcg gagacctggc tcggaggcgt gatcgggctc
      301 ttgcccgccg agccgttgcg gccgtcgccg ccctgcttct gctcggtcag ctggcccgga
      361 ttgttcggct gcccggagga ccctccggat gaaggttccc tccccgcgtt gcccggcgtg
      421 ccgctgtcac cggtgccggt cgagggcgtc cccggggaga cgctcggggg agtgggcgcc
      481 ggtccggagc gcaatccgcc acctgacgag ccctgcttgc cgccaccgtg gccgccgccg
      541 ttcccgccac ccccactccc acgagcgacc gtcgcgccgc cgctcgaggc gagctgcccg
      601 gtggcggcac tcacgggagc ggccgagctc ctggccgccc cggcctgggg cgccgcgctg
      661 agttcgacgt tgccgtagat cgacgcgtcc cgagacgagg gccagaggtt gaaggagacg
      721 agccccacca gggtcacgaa gacaaccgcg gctcctgcca gcaacgcccc ggacgctccg
      781 acgccgacga tgaagctctc gggggtattc gtatgtcttg tggtggccgc gtgagcctcc
      841 cccgcccgcg cggcacgcca atcgcgcgca ctcacgtgac ggtcatcggc gtcccctgtg
      901 gctccttgag ccgggcagcc gcgttggcca tttgttctag aggcgggggg gccggcccac
      961 ccactgccgg cgagccctta caggtagccc agcgggtcgg tggtctgccc gttgatccgg
     1021 acctcgaagt gcacgtgcgg gccgaagcag tatccggtgc aatcgctgag cccgatgacc
     1081 tggccctgcg cgacctgctg gcctgaagag accaggaatc gctcctggtg tccgtagcag
     1141 gtggagagcc cgccaccatg atcgatgcag gtgtagttcc catagccgcc ttcgggtccg
     1201 gcaatgctca cggtacccgc tgcggcggat cgaatggggg tcccggtggg gacgccgatg
     1261 tcgatgccgg ggtggaactc gtatccgccg ccgatgttgc gcgggccgta cccggaggtg
     1321 atcgggccgc tcaccggcca gatcagcccg tgccccgcga ccctgatggg cccggccggc
     1381 agcgctcctg tgctggcggc caactgctcc gcgatcttct gcgagatgtc gttgaggtca
     1441 ccctcgaggt tgtcctgctg cttccggacc tggacgaggg tggcgtgctg cttgcgcctg
     1501 gcggtggcga gctcgctggt gcgctgctcg agccgcgccc tggtcgcctc gagctccgcc
     1561 ttgcgggcgg cgatctggtc gcgggccgag cgcaccgtgt tgaccgtcac ctgcatctgg
     1621 ttgcggagct cgcgcacccg ggagacgatg tcgttgtcct ggtgctggag gttctgcagg
     1681 tactgggtgc gggccagcag gtcgtcgaag ccatgcgcct gcagcagcac ggtg
//
LOCUS       DATIFF010000017         5861 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2002043, whole genome shotgun sequence.
ACCESSION   DATIFF010000017 DATIFF010000000
VERSION     DATIFF010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5861)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5861)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5861
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2002043"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..593
                     /locus_tag="VLD58_00220"
     CDS             <1..593
                     /locus_tag="VLD58_00220"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HSB52741.1"
                     /translation="VKPDGSPAELFISPAAEARAEEWLTRSGLDPMQPLVAFAPDAAH
                     ATKRWPLRHWRTLAEQMADRGFGVVVVGGSADRMAGAEVVTAAPGAIASAAGELDLQT
                     AGALIRRTRVMVAGDTGPMHLATAVGRPVVALFGPTVEAFGFFPYRSPAKVLEVDLPC
                     RPCSSKGGPRCPLGHHRCLEEILPGTVLTATLGFAS"
     gene            590..970
                     /locus_tag="VLD58_00225"
     CDS             590..970
                     /locus_tag="VLD58_00225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52742.1"
                     /translation="MTASDPQHELVELLAKSARGPRREGVYALWLVLRVMLDYLNEPA
                     LSERAARRRLAALESRLSSLTLPPPLRRALTALLSELKESGRDAVPVLLSTLVAPARE
                     AAGLEAAEAVQRAARSARQAAASH"
     gene            997..1869
                     /locus_tag="VLD58_00230"
     CDS             997..1869
                     /locus_tag="VLD58_00230"
                     /inference="COORDINATES: protein motif:HMM:NF015736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DnaB-like helicase C-terminal domain-containing
                     protein"
                     /protein_id="HSB52743.1"
                     /translation="MRPRANQDRPSSPAEAVVARMDSRADAGERGDTVPTGFPSLDRM
                     LGGGLRRQDLVVLSGDVGSGKSSLGLAIALRTARAGLPVTYLSGEMSEERVMERALAL
                     EGRVPVDSLRKGELDDVSRSAVGAAALKLRDLPLLVRPMPGERFEEVTEALEIVPPRG
                     LLVLDDIGMTASPVPNATGDERLALTVRALKSVALERDVALVALAQLPKFRASRRDPR
                     PTLDDLGGLGVVKQVADVVLSIYREEMYRPSYGVEGAVELVVGKNRNGPTGYLDLYFY
                     RNWLRFEDMLDPDR"
     gene            complement(1866..2246)
                     /locus_tag="VLD58_00235"
     CDS             complement(1866..2246)
                     /locus_tag="VLD58_00235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52744.1"
                     /translation="MRIQMLPGLLLLALACREPRKMPAIGETIPNLPLPPSSEVLSRE
                     GGDDALKIQFRSTLAPDQVAGYYRDVLSKAPWNLVSDNTQPDGTIALYAEQAGPPLWV
                     TIKKADGAAGTIVDLAGAKVKPGR"
     gene            2360..3109
                     /locus_tag="VLD58_00240"
     CDS             2360..3109
                     /locus_tag="VLD58_00240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HSB52745.1"
                     /translation="MAGHSKWKQIKHKKALTDARRGASWTKVIREITVAARAGGGDPG
                     GNPRLRTAIDAAKAVNMPGDNIERAIKKGTGELEGAIYEEVTYEGYGPGGAAVIIEAS
                     TDNATRTVADVRHAFSRNGGNLGASNSVAWMFDRKGQILLEAAKYPEEAMMEAALEAG
                     AEDFQREGDQYIVFTTPQTFHAVQDALKARKFEIDSAEVAMVPKTTVKVEGKQAEQMI
                     KLLETLEELDDVSKVFSNFDIDASQLAEASN"
     gene            3123..3647
                     /gene="ruvC"
                     /locus_tag="VLD58_00245"
     CDS             3123..3647
                     /gene="ruvC"
                     /locus_tag="VLD58_00245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HSB52746.1"
                     /translation="MRVLGIDPGTAATGYGVVEAGDRGMLRLIECGVIRPPARATLAT
                     RLGAIHGELVELLARHTPDVMAVEEAFHARNARTTLVLGHARGVILLAADQAGVAIAE
                     YSPARIKQTVTGRGAALKPQVGFMVAQLPRLKSAPTPSDAADGVAVALTHLLRGRLRV
                     PVRGATPRPGARLP"
     gene            3644..4231
                     /gene="ruvA"
                     /locus_tag="VLD58_00250"
     CDS             3644..4231
                     /gene="ruvA"
                     /locus_tag="VLD58_00250"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00084.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HSB52747.1"
                     /translation="MIAVVSGTLGERTGDTIVIETPGGVGYAVTVPLGVMERLPAAGS
                     RVSLYTELVVREDGWLLFGFDHASERAIFQRLLSASGFGPKLALALLSTLGPARTVRS
                     IQQRDIASLSTVSGIGRKKAEKLVVELGDRFKDVPADVASAAPRPGEDALQALVGLGY
                     PAAIAEDAVRAIMADGTTETARVIRLALQRLAGKV"
     gene            4259..4432
                     /locus_tag="VLD58_00255"
     CDS             4259..4432
                     /locus_tag="VLD58_00255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52748.1"
                     /translation="MTVPATTAEWICTRCGSTNRQLVAQTTQRTIDRCNHCHAKHVVE
                     PGTRPVRWEARLK"
     gene            4542..5567
                     /gene="ruvB"
                     /locus_tag="VLD58_00260"
     CDS             4542..5567
                     /gene="ruvB"
                     /locus_tag="VLD58_00260"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HSB52749.1"
                     /translation="MTRLQITTPDQLPDETSAEAALRPARLEDFVGQEQVKASLRIAV
                     DAAKGRGEPLDHLLFFGPPGLGKTTLAMLLAREMGVALRTTSGPVLEKPGDLVSLLTT
                     LQPGDILFIDEIHRLRPVLEEFLYPAMEDFRVDVRIADGPNAQTIPMTIERFTLIGAT
                     TRFGLLTPPMRARFGMVERLHFYPAEELNVIVARSAGILGVPADEEGTMEIAKRSRGT
                     PRVANRLLRRVRDYAQVKAGGRITGPVAREALARLNVDEFGLDDMDARILKTIIEKFS
                     GGPVGLGTVAVAVGEDAGTLEEVYEPYLIQQGYLERTPRGRVATPFAFQRFGLKPPAG
                     AQRTIFE"
     gene            5589..>5861
                     /locus_tag="VLD58_00265"
     CDS             5589..>5861
                     /locus_tag="VLD58_00265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine:tRNA
                     ribosyltransferase-isomerase"
                     /protein_id="HSB52750.1"
                     /translation="MSLRTADFDYDLPPGLIAQEPTPTRGESRLLVVGRELGDRMFRD
                     LVDLIPAGDLLVLNTTKVRHARFIGTRASGAPAEVLLIHPAQEGRWI"
BASE COUNT          912 a         2050 c         2035 g          864 t
ORIGIN      
        1 atgtgaagcc cgatgggtcg ccggcggagc ttttcatcag cccggcggcg gaggcgcggg
       61 cggaggaatg gctcacccgg agcgggcttg atcccatgca accgctggtc gcctttgcgc
      121 cagacgcggc ccatgccacc aagcgctggc cgctgcgcca ttggcgcacg ctggcggagc
      181 agatggctga tcggggattc ggcgtggtgg tggtcggagg gagcgcggac cggatggccg
      241 gcgccgaggt ggtgaccgcc gcaccggggg ccattgcgag cgcggcgggc gagctcgatc
      301 tgcagaccgc aggcgccctc atccggcgca cccgcgtcat ggtggcggga gataccgggc
      361 cgatgcacct tgccacggcg gtgggacgcc cggtggtcgc cctgttcggg cccacggtcg
      421 aggccttcgg cttctttccc taccgttcgc ccgccaaggt gctcgaggtc gacctgccgt
      481 gccggccctg cagcagcaag ggcggccccc gctgcccgct cgggcatcac cggtgtctgg
      541 aggagattct gcctggaacg gtcctgaccg ccaccctcgg attcgcctca tgaccgcaag
      601 cgatccgcag cacgagctgg tggagctcct ggcgaagagc gcccgcggcc cgcgccgcga
      661 aggggtgtac gccctgtggc tggtgctgcg ggtcatgctc gactacctca acgaaccggc
      721 gctgtccgag cgcgcggccc gccggcgcct cgccgcgctg gagtccaggc tttcgagtct
      781 caccctccct ccgccgctgc ggcgggcgct caccgcgctg ctcagcgagc tcaaggagag
      841 cggacgcgac gcggtgcccg tccttctctc caccctcgtc gcgccggcgc gggaggccgc
      901 cggactggaa gcggccgaag cggtacagcg cgcggcccgg tccgcccggc aggccgcggc
      961 gtcccactga tcgggtcgca cccctatctt ctgagcatgc gtcctcgcgc caatcaggat
     1021 cgtccctcgt cgccggccga agcggtcgtc gcgcggatgg attcccgcgc cgatgccggc
     1081 gaacggggcg ataccgtgcc gaccggattc ccctcgctcg accggatgct gggcggcggg
     1141 ctccggcgcc aggacctggt ggtgctttcg ggcgacgtgg gcagcggcaa atcgagcctc
     1201 ggccttgcca tcgcactccg caccgcccgc gccgggctgc cggtgaccta tctctctggt
     1261 gaaatgtcgg aggagcgggt gatggagcgg gcgctggcgc tggaagggcg cgtcccggtc
     1321 gacagtctcc gcaagggcga gctcgacgac gtgagccgct cggccgtggg cgcggcggcg
     1381 ctcaagctgc gcgacctccc gctgctggtg cgcccgatgc ccggcgaacg cttcgaggag
     1441 gtgaccgagg cgctcgaaat cgtgccgccg cggggactcc tggtgctgga cgatatcggc
     1501 atgaccgcga gcccggtccc caatgccacc ggcgacgaac gcctggcgct cacggtgcgg
     1561 gcgctcaaga gcgtggcgct ggagcgggac gtggcgctgg tcgccctggc ccagctaccc
     1621 aagttccggg cttcgcgccg cgatccgcgc cccaccctcg acgacctcgg cggcctcggc
     1681 gtggtcaagc aggtcgcgga tgtggtgctg tcgatctacc gggaggagat gtaccggccc
     1741 agctatggag tggagggcgc ggtggagctg gtggtgggga agaaccgcaa cgggccgacc
     1801 gggtatctcg atctctactt ctaccgcaac tggctccgct tcgaggacat gctggacccg
     1861 gaccgctagc ggcccggctt caccttcgct cccgccagat ccacgatcgt ccctgccgcc
     1921 ccgtccgcct tcttgatggt gacccagagc gggggcccag cctgctccgc atagagcgcg
     1981 atggttccgt ccggctgggt gttgtcgctc accaggttcc agggcgcctt cgagagcacg
     2041 tcccggtaat agcccgccac ctgatcgggg gcgagcgtcg aacggaattg gatcttgagg
     2101 gcgtcgtcgc cgccttcgcg cgacagcacc tcggaactgg gggggagcgg caggttggga
     2161 atggtctcgc cgatcgcggg catcttcctc ggttccctgc aggcaagggc gagcagcagg
     2221 agacccggca gcatctggat tcgcataggg cggggagagt agcgggacgg agggagaagg
     2281 gtcaaggtcg gggttcccgg ctgatagcta accgcttggc ggtcccttat tttgctcact
     2341 gacttccccg gagcgcccaa tggccggcca tagcaaatgg aaacagatca agcacaagaa
     2401 ggccctgacc gatgcccgcc ggggtgcttc ctggaccaag gtgatccggg aaatcacggt
     2461 ggcggcccgc gccggcggcg gcgaccccgg gggtaacccg cggctccgga ccgccatcga
     2521 cgcggccaag gccgtcaaca tgccgggcga caacatcgag cgcgccatca agaagggcac
     2581 cggcgagctc gaaggcgcca tctatgaaga agtgacgtat gaaggctacg gtcccggcgg
     2641 ggccgcggtc atcatcgagg ccagcaccga caacgccacc cgcaccgtgg ccgacgtccg
     2701 ccatgccttc agccgcaacg gcggcaacct gggcgccagc aactcggtcg cgtggatgtt
     2761 cgaccggaag ggccagatcc tcctcgaagc cgccaagtac ccggaggagg ccatgatgga
     2821 agcggccctc gaggcgggag cggaggattt ccagcgggag ggcgaccagt acatcgtctt
     2881 caccaccccc cagacgttcc atgcggtcca ggatgcactc aaggcccgca agttcgagat
     2941 cgactcggcc gaagtcgcca tggtccccaa gaccacggtc aaggtcgagg gcaagcaggc
     3001 ggagcagatg atcaagctgc tcgaaacgct ggaagagctg gacgacgtgt cgaaggtctt
     3061 ctccaacttt gatatcgacg caagccagct ggcggaggcc tcgaactgac ggggctctgc
     3121 cagtgagggt gctggggatc gacccgggca ccgccgccac tggctatggc gtggtggaag
     3181 ccggcgatcg ggggatgctg cggctgatcg aatgcggcgt catccgcccg ccggcccgag
     3241 ccacgctggc cacccggctt ggcgccatcc atggcgaact ggtcgaactc ctcgcccgcc
     3301 acaccccgga tgtcatggcg gtcgaggaag cctttcatgc ccggaacgcg cgcaccacgc
     3361 tggtgctggg gcatgcccgc ggcgtgattc tcctcgccgc cgaccaggcg ggtgtcgcga
     3421 tcgccgagta ctcccccgcg cgcatcaagc agacggtgac gggcaggggc gccgcgctca
     3481 aaccccaggt ggggttcatg gtggcgcagc tgccccggct caagtccgcc cccaccccgt
     3541 ccgatgcggc cgatggcgtg gcggtggcgc tcacccatct gctgcgtgga cggctgcggg
     3601 tgccggtgcg gggcgcaacg cccagacccg gagcccggct gccatgatcg cggtagtgag
     3661 cggcaccctc ggtgaacgca ccggcgacac catcgtgatc gagacgcccg gaggcgtcgg
     3721 ctacgcagtc acggtcccgc tcggtgtcat ggaacggctt ccggctgcgg gctcgcgggt
     3781 cagcctgtac accgagctgg tggtgcgcga agacggctgg ctcctcttcg gcttcgatca
     3841 cgcgagcgag cgggcgatat tccagcggct cctgtcggcc agcggattcg gccccaagct
     3901 cgcgctggcg ctcctgagca ccctgggccc cgcccgcacc gtgcggagca ttcagcagcg
     3961 ggacatcgcg agcctctcca ccgtgagcgg catcggccgg aagaaggccg agaagctggt
     4021 ggtcgagctg ggcgatcgtt tcaaggatgt gccggccgat gtcgccagcg ccgcgccccg
     4081 tcccggagaa gatgcgctcc aggcgctggt gggactgggt tatcccgccg ccatcgcgga
     4141 agacgcggtt cgcgccatca tggccgacgg caccaccgag acggcccggg tgatccggct
     4201 ggcgttacag cggctcgccg gaaaagtctg agaataggga acgatccaag gagagcacgt
     4261 gactgtcccc gcaaccaccg ccgaatggat ctgcacccgc tgcggcagca ccaaccgcca
     4321 gctggtggcc cagaccaccc agcgtaccat cgaccgctgc aatcactgcc acgccaagca
     4381 cgtggtcgaa ccggggacgc gcccggtgcg gtgggaggcg agactgaagt aggccggagg
     4441 caggaggcgg gagtatgttc cgtgcactgc cgcgctcctt gtgccaacgc tgaacccacc
     4501 ggcctccggc ctccggcccc tcctcggacc cgcgaatcgc gatgacccgt ctccagatca
     4561 ccacccccga ccagcttccg gacgagacca gcgccgaggc cgcgctgcgc ccggcgcggc
     4621 tggaggattt cgtggggcag gagcaggtca aggcgtcgct ccggatcgcg gtcgatgccg
     4681 ccaagggccg gggtgagccg ctcgatcacc tgctcttctt cgggccgcca ggcctgggca
     4741 agaccaccct cgcgatgctc ctggcccgcg aaatgggtgt ggccctgcgc accacgtcgg
     4801 gccccgtgct cgagaagccc ggcgacctgg tgagcctgct gaccaccctt cagccgggcg
     4861 acatcctgtt catcgacgag atccaccggc tgcggccggt gctggaggag ttcctctatc
     4921 ccgcgatgga ggatttccgg gtcgacgtgc gcatcgccga cggccccaac gcccagacca
     4981 tcccgatgac gatcgagcgg ttcaccctca tcggggctac cacccgcttc gggctgctca
     5041 ctcccccgat gcgggcccgc ttcgggatgg tcgagcggct tcacttctat ccggccgagg
     5101 agctcaacgt catcgtggcg cgctccgccg ggatcctggg cgtgcccgcc gacgaagagg
     5161 gcacgatgga gatcgccaag cggagccggg gaaccccgcg cgtcgccaac cgcctgcttc
     5221 gccgggtgcg cgactacgcg caggtgaagg ccggcgggag aatcaccggc cccgtcgcgc
     5281 gcgaggcgct ggcccgcctc aacgtcgacg agtttggcct cgacgacatg gacgcccgga
     5341 tcctcaagac catcatcgag aaattctccg gcggcccggt cggactcggc accgtggcgg
     5401 tggccgtggg cgaggatgcc ggcaccctcg aggaagtgta cgagccgtac ctgatccagc
     5461 agggctacct cgaacgcacc ccccggggcc gcgtggccac gcctttcgcc ttccagcgct
     5521 tcgggctcaa gccaccggcc ggcgcccagc ggaccatctt cgagtagccg cccgccgccc
     5581 cgcggcgtat gtcccttcgc accgctgact tcgactacga tctgccaccc ggcctgatcg
     5641 cccaggagcc gacccccacc cggggcgaaa gccggctcct ggtggttggc cgcgagctcg
     5701 gtgaccgcat gttcagggat ctggtcgatc tcattcctgc cggcgacctc ctcgtcctca
     5761 acaccacgaa ggttcggcac gcccgcttca tcggcacccg cgcgagcggc gcacccgccg
     5821 aagtgctgct gatccacccg gcgcaggagg gacgctggat c
//
LOCUS       DATIFF010000018         1109 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_155628, whole genome shotgun sequence.
ACCESSION   DATIFF010000018 DATIFF010000000
VERSION     DATIFF010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155628"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..453)
                     /locus_tag="VLD58_00270"
     CDS             complement(<1..453)
                     /locus_tag="VLD58_00270"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSB52751.1"
                     /translation="MQPDQLSRDLEAVCFRFSVMVRTVGRRSGLDEAELDELMQAVRV
                     RLWRALGRQGALPVITSSYVYQTAQSAVIDLIRSRRSARYVRSEGVRALEEHSVAGQP
                     DAVLEEHEAARRIFRVVDQLPADRRAAVRLHLHGYRREEIARMLRWSGT"
     gene            complement(492..695)
                     /locus_tag="VLD58_00275"
     CDS             complement(492..695)
                     /locus_tag="VLD58_00275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52752.1"
                     /translation="MSTSQPPEPPPPAGSPLGSGYFIVRVRRISGAGVGDVSGVVERL
                     GTGEKREFRSSTELAQVVAEWAE"
     gene            837..>1109
                     /locus_tag="VLD58_00280"
     CDS             837..>1109
                     /locus_tag="VLD58_00280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52753.1"
                     /translation="MGRRKLLTLLTYLVRREGRSVGRGELAALFWPEADESRGRQSLR
                     QALVELRTAVGDSLEVSDREVRIMPGSVALDVASFEHLMDDGELQAA"
BASE COUNT          171 a          410 c          355 g          173 t
ORIGIN      
        1 ggtgccgctc cacctcagca tccgggcgat ctcctcccgg cggtacccat gcaggtgaag
       61 ccggaccgcg gcccggcgat cggcgggaag ctggtcgacc acccggaaga tccggcgggc
      121 cgcttcatgt tcctccagga cggcatccgg ctggccggcc accgaatgtt cctccaatgc
      181 cctgacccct tcgctccgaa cgtaacgcgc tgaccgccgg gaccggatca ggtcgatcac
      241 cgcgctctga gcggtctgat agacgtacga cgaggtgatg acggggagag cgccctgccg
      301 ccccagcgcc cgccagagcc ggacccgcac cgcctgcatc agctcatcca gttccgcttc
      361 gtccagcccg cttcggcggc ccaccgtcct gaccatcaca ctgaagcgaa agcacacggc
      421 ctcgagatcg cgcgagagct gatcaggttg catcggtgtc cccccgggtt ccatcgtccg
      481 ccctctcatc actactccgc ccactccgcc acgacctgcg ccagctcggt gctgctgcga
      541 aactcccgct tctccccggt ccccagccgc tcgaccactc cgctcacatc tccgaccccg
      601 gccccggaga ttcgccgaac ccgcacgatg aagtagcccg agcccaacgg gctcccggcg
      661 gggggcggcg gctcgggcgg ttgcgatgtg ctcatgtggg aggcatgtta tccggcaagc
      721 gccaaggccc cgtcagacgg cgcgtcaaat tcatcccagt caaccatttg acaccagagt
      781 ccaggcttac cgctttgggc cccctttcgc tctctcgcga gggcgagaac gccctggtgg
      841 gccgccgcaa gctgctgacg ctcctcacct acctggtgcg gcgcgaaggg cggagcgtgg
      901 gccggggcga actggccgcg ctcttctggc cggaggcgga cgagtcgcgc gggcggcagt
      961 cgctccggca ggcgctggtc gagctccgga ctgcggtagg cgactcgctg gaggtgagcg
     1021 accgggaagt gcggatcatg ccgggcagcg tggccctcga cgtcgcctcc ttcgagcacc
     1081 tgatggacga tggtgagctt caggcggcg
//
LOCUS       DATIFF010000019         3324 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1540297, whole genome shotgun sequence.
ACCESSION   DATIFF010000019 DATIFF010000000
VERSION     DATIFF010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3324
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1540297"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..576
                     /locus_tag="VLD58_00285"
     CDS             <1..576
                     /locus_tag="VLD58_00285"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSB52754.1"
                     /translation="PVVHPGLPRWERDLADAAAQGAPAVRADPGFLGLAPAGAEMVRL
                     IQAAGDIGIPLLAAVRLEDGRGRHPLDVAPELTPATVRTWVRQHPSARFVITHAEREF
                     IEQVHFGATPDEAARIWWDVSWVWGPPEEHLAVLLATLGEARFLFGSGQPLRLPETPL
                     ARLDLLDIAPADRRAILTDNAARLAVRKPDA"
     gene            573..908
                     /locus_tag="VLD58_00290"
     CDS             573..908
                     /locus_tag="VLD58_00290"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSB52755.1"
                     /translation="MTDPARRIHPRLSFSGRPAPRLETADRSYEIVDLSQGGLRLRAS
                     GMAPAMTIGEVLRAVIRFPADRAVEVRGRVLRISGSEAAVELEQGQERLAATRPMGPA
                     VPRRSGLLW"
     gene            917..1249
                     /locus_tag="VLD58_00295"
     CDS             917..1249
                     /locus_tag="VLD58_00295"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSB52756.1"
                     /translation="MGWVHNREYYRIAYPAALRPKLLVQGHTFDVVDICERGIRFRLG
                     EAGAPDVGLELEGTVRFRRGETVTVRGAILRVNQDEVAARLDAGVPLRAIMDEQRFLL
                     DRRRHLGL"
     gene            1251..2378
                     /gene="solA"
                     /locus_tag="VLD58_00300"
     CDS             1251..2378
                     /gene="solA"
                     /locus_tag="VLD58_00300"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: protein motif:HMM:NF008425.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050131 - N-methyl-L-amino-acid oxidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HSB52757.1"
                     /translation="MPATYDVAVVGLGAVGSAATEALACRGLRVIGLDRFRPPHPFGS
                     THGRSRIIREAYYESPAYVPLVQRAYREWDRLAAASGRTLLRQTGGLMLGAPDGELIA
                     GARLSAESHRLPHDLLDTGELRRRFPHLRVMDGTVAVWEPRAGFLDPEACVSACLELA
                     VRGGAELRLETPADDWRPEGDSIRLTAGAERISCGTMILAAGPWLPGLLGRFLPPLVV
                     ERQVMWWFRPASRASAFTADHHPVFIWEWENGRFFYGIPDHGHGVKVAVHHEGRPADP
                     DRVERGVSRTELDGMRNLLRRFIPDLDGEPVEHAVCLYTNTPDHHFLLGPHPDQPRVL
                     LASACSGHGFKFASALGEVLADLVERGETEFDLGPFDVRRF"
     gene            complement(2483..>3324)
                     /locus_tag="VLD58_00305"
     CDS             complement(2483..>3324)
                     /locus_tag="VLD58_00305"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB52758.1"
                     /translation="LERDSGLAVTSFRDSAAAQVALRSGQVAVLAIPQGDSVAYRFDD
                     TRPEAALARLSVDHALQAAAGRTDPVPTRTEIVRERGSRYIDFLLPGLLGMNLMGSGI
                     WGSGFAIVDARRKKLLKRLVATPMSRADYLASFLLAQLLLLVLEVGTILTFGVLVFGV
                     PVRGSLALVALVCVVGSLTFGGLGLLVAARPRTMEGASGLMNLIMLPMWVLSGVFFSS
                     SRFPEAMQPVVQALPLTAVVNMLRAVMLEGSGLMAVAGQLAILLVWLVVGFGLALRLF
                     RWQ"
BASE COUNT          491 a         1168 c         1168 g          497 t
ORIGIN      
        1 ccggtggtgc atcccgggct cccgcgctgg gagcgtgacc tggcggatgc cgcggcccag
       61 ggcgctcccg cggtgcgtgc cgacccgggc ttcctggggc tggcccccgc cggcgccgag
      121 atggtccggc tgattcaggc cgcgggcgac atcggcattc cgctcctggc ggcggtgcgg
      181 ctggaggatg gccgggggcg ccacccgctg gacgtggccc ccgagctcac ccccgccacc
      241 gtccggacct gggtccggca gcatccctcg gcgcggttcg tgatcaccca cgcggagcgg
      301 gagttcatcg aacaggtgca cttcggggcc acccccgacg aagccgcccg gatctggtgg
      361 gatgtctcct gggtctgggg gccgccggaa gaacacctgg cggtcctgct tgccacgctg
      421 ggcgaagccc gcttcctttt cgggagcgga cagccgctcc ggctgccgga gacccctctg
      481 gccagactcg acctgctgga catcgcgccc gctgaccggc gcgcgatcct gaccgacaac
      541 gccgcaaggc tcgccgtgag gaagccagac gcatgactga tcctgcccgt cggatccatc
      601 cccggctctc gttcagcggg cgccccgcgc cccggttgga gaccgcggat cggagttacg
      661 agatcgtgga tctctctcag ggcggcctgc gactccgtgc ctccgggatg gcgcccgcca
      721 tgacgatcgg cgaggtgctc cgcgcggtca tccggttccc cgcggatcgc gccgtggagg
      781 tgcgtggtcg ggtgctgcgg atctccgggt ccgaggcggc ggtggagctc gagcaggggc
      841 aggagcggct cgcggccacc cggccgatgg ggccggccgt gccccggcgt tccggcctgc
      901 tctggtaggc tcggccatgg gctgggtcca caaccgggag tactaccgaa tcgcctatcc
      961 ggcagcgctg cggccgaagc tgctggtgca ggggcacacc ttcgacgtgg tggacatctg
     1021 cgagcgggga atccgcttcc gcctcggcga agcgggcgct cccgatgtcg gcctggagct
     1081 ggaaggcacc gtccggttcc ggcgcggcga gaccgtgact gtccgcggcg cgatcctccg
     1141 ggtcaaccag gacgaggtag ccgcacggct ggatgccggc gtgcctctcc gcgcgatcat
     1201 ggatgagcag cgcttcctgc tggaccggcg gcgccacctc ggcctctgac atgcccgcga
     1261 cgtacgacgt cgcggtggtc ggactgggcg cggtcggcag cgccgcaacc gaagcgctcg
     1321 cctgccgggg tctccgcgtc atcgggctcg atcggttccg cccgccccac ccctttggtt
     1381 ccacccacgg ccgttcccgc atcatccggg aagcgtacta cgaatccccc gcgtatgtcc
     1441 ccctggtgca gcgtgcctac cgggagtggg accgccttgc cgccgcgagc ggccggacac
     1501 tgctccgcca gaccggcggg ctcatgctcg gcgcccctga cggggagttg atcgcagggg
     1561 cccggctcag cgccgaatcc caccggctgc cccacgacct gctggacacg ggagagctca
     1621 ggcggcggtt cccccatctg cgcgtgatgg acggcaccgt ggccgtgtgg gagcctcgcg
     1681 ccgggttcct ggatccggag gcatgcgtct ccgcctgcct cgagctggcg gtccgaggtg
     1741 gtgcagagct ccggctggag acgcctgcgg acgattggcg acccgaaggc gacagcatcc
     1801 ggctcacggc gggtgcggag cggatctcct gcggcaccat gattctcgcc gctggcccct
     1861 ggcttcccgg cctcctcggc cggttccttc cgccgctcgt ggtggagcgg caggtaatgt
     1921 ggtggttccg gccggccagc cgggcatctg ctttcacggc cgatcaccac ccggtcttca
     1981 tctgggaatg ggagaatggc cgcttcttct acggcatccc ggaccacggt catggcgtga
     2041 aggtggcggt gcatcacgag ggccgccctg ccgaccccga tcgtgtggaa cgaggagtga
     2101 gcagaaccga gctcgacggg atgcggaacc tgctccgccg cttcatcccc gatctcgacg
     2161 gtgagccggt ggagcacgcc gtctgtctct acaccaacac gccggaccat cacttcctgc
     2221 tcggtccgca ccccgaccag ccgcgggtgc tgcttgcgag tgcctgctcg ggccacgggt
     2281 tcaagttcgc cagcgcgctg ggagaggtgc tggcggacct ggtggagcgg ggggagacgg
     2341 agttcgacct ggggccgttc gacgtgcgga ggttttgagg aggttggcta tgggctatgg
     2401 gctatgggtt atgcgctatg cgctgagcgc cgatcccata gcccatagcc catagcctat
     2461 agcccacagc ccctgccagc ccctactgcc accgaaacaa ccgcaacgcc agcccgaacc
     2521 ccaccaccag ccagaccagc aggatcgcca gctggccggc gaccgccatg aggccggatc
     2581 cctccagcat caccgcccgc agcatattga ccaccgcggt gagtggcagg gcctgcacaa
     2641 ccggctgcat ggcctcgggg aatcgcgagg aggagaagaa cacccccgag agtacccaca
     2701 tcgggagcat gatcaggttc atcagccccg acgcgccttc catggtcctg ggtcgcgcgg
     2761 ccaccagcag gccaaggccg ccgaaggtga gcgaacccac cacgcagacg agcgccacga
     2821 gcgccaggga gccacggacg gggacgccga acacgagcac accgaaggtg aggatggtgc
     2881 ccacctccag gaccaggaga agtaactggg ccaggagaaa ggaggcgagg taatccgccc
     2941 gggacatcgg ggtggccacc agccgtttga gcagcttctt ccggcgtgcg tccacgattg
     3001 cgaatccgct gccccagatc ccgcttccca tgaggttcat gccgagcagc ccgggaagca
     3061 ggaagtcgat gtaccgggag ccgcgctcgc ggacgatttc cgtgcgggtt ggaaccgggt
     3121 cggtccgtcc ggcggccgcc tgcagagcgt ggtccacgct gaggcgcgcg agcgcggcct
     3181 ccggacgggt gtcatcgaag cggtaggcta cgctgtcgcc ctgcgggatg gcgaggaccg
     3241 ccacctggcc gcttcgaagg gcgacctgcg ccgccgccga atcccggaag ctcgtcacgg
     3301 cgagcccgga gtcccgctcg agca
//
LOCUS       DATIFF010000020         2355 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_925096, whole genome shotgun sequence.
ACCESSION   DATIFF010000020 DATIFF010000000
VERSION     DATIFF010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2355
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_925096"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..981)
                     /locus_tag="VLD58_00310"
     CDS             complement(<1..981)
                     /locus_tag="VLD58_00310"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HSB52759.1"
                     /translation="MRTRRQFLKDLAGGAAVLGSGAFLPPLARAADTSSVGPATLPAG
                     TLEVSFLESLPGKRPLIKRSYRPPNFETPLEVFDQVFTPNDLFFVRYHLPRIPEVSVA
                     EWKLEIGGDSVEKPFTLDLPGLQRSFEQVELPAVCQCSGNRRGLSDPHVAGVEWGIGA
                     MGNARWKGVRLKDVLAKAGLKKEALEIAFNGADHGSLEATPDFQKSLPIWKANDENTL
                     IAWQMNGEPLPHWNGAPVRLVVPGWTGTYWMKHLVSIQAISQPFKNFWMATAYRIPKG
                     KFPIVDRFISQETEGNTPITEMVVNSLLTSPRDGQRFRPGQAVAVKGIAWD"
     gene            complement(1124..2284)
                     /locus_tag="VLD58_00315"
     CDS             complement(1124..2284)
                     /locus_tag="VLD58_00315"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016041.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HSB52760.1"
                     /translation="MTLDPIALAVPLFFLLIGLELLLARARHRRVYRFTDSYADLGCG
                     VTQRVVLLLFEASLLAVYALLYEHGRLWTFAPGSAWPWIIAIVGVDFAYYWWHRLSHE
                     INLLWAVHVVHHQSEDYNLAVALRQAVLSPLTVMPFYLPLAVLGVPVTQFFIINALST
                     LYQFWIHTELVGRAGVLEQLVNTPSLHRVHHGVNPEYLDKNYAATFICWDQLFGTLRR
                     EEAPVVYGVSHPLRSFDPVWAQVQPLIALWRAMRRAPSAREAIRFLLASPAWHPDWLG
                     PVEPRRGVDPEALAKFDVQPGRRRQGYVFAQLALIIVVAFALLTWHHALSAAALVTAV
                     AWVLVSLVAGAALLEGRRWAVGLELARIGVLAGAVAIVLLVPSIGPVLLASR"
BASE COUNT          408 a          782 c          841 g          324 t
ORIGIN      
        1 gtcccaggcg attcccttca ccgccaccgc ctggccgggg cggaagcgct ggccgtcgcg
       61 cgggctggtg aggagcgagt tcaccaccat ctcggtgatc ggagtgttgc cttcagtctc
      121 ctgcgagatg aagcggtcga cgatcgggaa cttgcccttg gggatccggt aggcggtggc
      181 catccagaag ttcttgaacg gctgggagat ggcctggatc gagaccagat gcttcatcca
      241 gtaggtgccg gtccaacccg gcaccaccag gcggaccggg gcgccgttcc agtggggcag
      301 cggctcgccg ttcatctgcc aggcgatgag ggtgttctcg tcgttcgcct tccagatcgg
      361 gaggctcttc tggaagtccg gggtggcctc gagcgagccg tggtccgcgc cgttgaaggc
      421 gatctccagc gcctccttct tcagccccgc cttcgccagc acatccttca gccgcacgcc
      481 cttccagcgg gcgttgccca tcgccccgat gccccactcc accccggcga cgtgtggatc
      541 ggagagtccc cggcgattcc ccgagcactg gcagaccgcg ggaagctcca cctgctcgaa
      601 gctccgctgg aggcccggca ggtccagggt gaagggcttc tccaccgaat cgccaccgat
      661 ctccagcttc cactccgcga cggagacctc cgggatccgc ggcagatggt agcggacgaa
      721 gaagaggtcg ttgggagtga agacctggtc gaagacctcg agcggggtct cgaagttggg
      781 cggccggtag cttcgcttga tgagcggccg ctttccgggg agcgactcga ggaacgagac
      841 ttccagcgtg cccgcgggca aggtcgccgg tccgaccgac gaggtgtccg ccgcgcgcgc
      901 cagcgggggg agaaacgctc cggagccgag caccgccgca ccgcccgcga ggtccttcag
      961 gaactgccgc ctggtcctca tgtgcacctc cccggaaggg atgcgctgcg agcggtggca
     1021 gagtcccgga gggctccccc acctgtcaag gacgggaacg ttgcgttggc gacgacgtgc
     1081 gattcacgac ggcggtggcg cgacgcgtcg ccgcggcaga cggctagcgg ctggcgagga
     1141 gcacgggccc gatcgacggg accagcagca cgatggcgac cgctccggcg agcactccga
     1201 tccgcgccag ctccagaccc accgcccacc gccggccctc gagcagcgcg gcgccggcca
     1261 ccagcgagac cagcacccag gccaccgcgg tcaccagcgc cgcggcggac agcgcgtgat
     1321 gccaggtcag cagggcgaag gcgacgacga tgatcagggc gagctgggcg aagacgtagc
     1381 cctgacgacg acgcccgggc tgcacgtcga acttggcaag cgcctcgggg tccacgccgc
     1441 gccgcggctc caccggaccg agccagtccg ggtgccaggc cggagaggcg aggaggaagc
     1501 ggatcgcctc gcgcgccgac ggcgctctgc gcatcgcccg ccagagcgcg atcagcggct
     1561 gaacctgcgc ccacaccggg tcgaagctgc ggagcggatg gctgacgccg tagacgaccg
     1621 gggcctcttc ccggcgaagg gtgccgaaga gctggtccca gcagatgaag gtcgcggcgt
     1681 agttcttgtc gaggtactcg ggattgaccc cgtggtgcac ccggtggagc gagggcgtgt
     1741 tcaccagctg ctcgaggacg cccgcccggc ccaccagctc ggtgtggatc cagaactgat
     1801 agagcgtgct cagagcgttg atgatgaaga actgggtcac cggcacgccc agcaccgcca
     1861 gcggcaggta gaagggcatc accgtcagcg gggagagcac cgcctgccgg agcgcgaccg
     1921 cgaggttgta gtcctcgctc tggtgatgca ccacgtgcac tgcccagagg aggttgatct
     1981 cgtgggacag ccggtgccac cagtagtagg cgaagtcgac gccgacgatg gcgatgatcc
     2041 acggccaggc gcttcccggg gcgaaggtcc agagccggcc gtgctcgtag aggagcgcgt
     2101 agacggcgag cagcgaggcc tcgaagagca gcaggaccac ccgctgggtc accccgcagc
     2161 cgaggtcggc gtagctgtcg gtgaaccggt acacgcgccg gtgacgagcg cgagcgagga
     2221 gcagctccag accgatcagc aggaagaaca gaggtactgc cagcgcgatg gggtccagcg
     2281 tcatgggaag tcggaaggcg agtctagccc ggttgactcg ccggctggag gatgcccacc
     2341 gtccattcgg cgaca
//
LOCUS       DATIFF010000021         3223 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_617369, whole genome shotgun sequence.
ACCESSION   DATIFF010000021 DATIFF010000000
VERSION     DATIFF010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3223
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_617369"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(130..1509)
                     /locus_tag="VLD58_00320"
     CDS             complement(130..1509)
                     /locus_tag="VLD58_00320"
                     /inference="COORDINATES: protein motif:HMM:TIGR01777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HSB52761.1"
                     /translation="MTRVFERSVDLPVPAAVAYDWHTRPGALERLLPPWDKVRVLERT
                     GDLLHGRVVLEVPIGPIHQRWVSEHQGGAPGVEFADRQVEGPFQEWLHSHRFESRGRA
                     ASRLVDRVEYELPFGAVGALASGSVEERLIRTFRYRHRVLQDDLTASQLYGAVRPRTI
                     AITGATGTLGHALIPFLTTQGHRVRRITRGQTSGDDIHWDPGAGKLEGAALEGVDAVI
                     HLAGESIAGGRWTEERRRKILDSRIQGTTLLSETLARLRRPPSVLVSASAVGIYGNRG
                     DEVLNESAGVRTGAGTFFVEQVAHAWEASTEPAERAGIRVVRTRIGIVLTPAGGALPP
                     MMLPLLFGVGGRMGSGRQYMSWIAIDDVVGALYHALVTESLKGPVNLTAPTPATNAAF
                     TETLAHILHRPAFFPVPEAAVRLLVGQMADELLLSSALVIPERLTQSGYRFRFPDLDG
                     ALRHVLGRG"
     gene            1620..>3223
                     /locus_tag="VLD58_00325"
     CDS             1620..>3223
                     /locus_tag="VLD58_00325"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HSB52762.1"
                     /translation="MRHLSFLALALGLAAPATAQSVADSSPFRQLDLPAANTIRTGSG
                     RPGRDYWQQRADYRIQATLDPDKQELSGRETIHYVNHSPDRLTYLWLHMEQNICEPGS
                     VTNQLDQPPLVFLGSTFDFSCKGGRGGLTLESLTSLGRPLAHTVYGTTMRVELPRPLA
                     SGAAIDLSLAWRFAVPESGAGRMGRDGNLFELGQWYPRVAVYDDVRGWNHEPYIGAGE
                     FYLEYGSFDVAVTVPAAYTVAATGTLLNPLEVLTPAQRARLVLARASDTAVAIITADE
                     AGTPRSRPRQTGTLTWRFHADSVRDFAFAAAPNFRWDASSWKGILVHTYYRPSATLWT
                     EANRMVREAVKYYSEQWYHYPYAHISSIEGPIEGMEYPMMTFDPSGPARIDLQWVLAH
                     ELGHQWTPMIVGSNERLYPWMDEGFNTFIDLANAALYFKGTPYGDSIEVHPLHLYKDH
                     AIPGLEQPLINRPVEVRDLFWGGYQKPALMMQMLRYKVLGKERFDAAYREYLRTWAFK
                     HPTPADFFRLMRDQSGQELDWFWRSWV"
BASE COUNT          516 a         1166 c         1050 g          491 t
ORIGIN      
        1 cgctgtagct cacttcattc aaccggcgcc ggtcgctaca ggagctaacg cgccgtcggt
       61 cccatcaccc gcgcccctcg cccctgtcac gcaatcagcc cccgaccccc gacctcaagc
      121 ccccgaccct cagccccgtc ccaacacatg ccgcagcgcc ccgtccaggt ccgggaagcg
      181 gaaccggtag ccgctctggg tgagccgctc gggaatgacc agtgcgctcg agagcagcag
      241 ctcatccgcc atctgcccca ccagcaggcg caccgccgcc tcgggcaccg ggaagaaggc
      301 cggccgatgg aggatgtgcg ccagcgtctc agtgaaggcg gcgttggtgg ccggggtggg
      361 ggccgtcagg ttcacggggc ccttgagcga ctcggtgacc agtgcgtgat agagcgcgcc
      421 caccacgtca tcgatcgcga tccagctcat gtactggcgc ccgctcccca tccgcccgcc
      481 cacaccgaag aggagcggca gcatcatggg cgggagcgca ccgcccgccg gcgtcaggac
      541 gatcccgatc cgtgttcgca ccacccggat gcccgcgcgc tcggccggct cggtcgaggc
      601 ttcccaggcg tgcgccacct gctcgacgaa gaaggtgccg gcgccggtgc ggaccccggc
      661 actctcgttg agcacctcgt cgccccggtt gccatagatc ccgaccgcgg atgccgagac
      721 gagcacgctg ggaggccggc gaaggcgggc gagggtctcg ctcagcaggg tcgtgccctg
      781 gatccggctg tcgaggatct tccgccgtcg ctcctcggtc cagcggcccc cggcgatcga
      841 ttcgccggcg aggtggatga cggcgtccac tccctcgagc gccgcccctt cgagcttgcc
      901 cgcacccgga tcccagtgaa tgtcgtcacc cgaagtctgc ccccgggtga tgcgcctgac
      961 ccggtgtccc tgggtggtga gaaacggtat cagggcgtgg ccgagcgttc cagtcgcgcc
     1021 ggtgatggcg atcgtgcggg ggcgcaccgc gccgtacagc tgtgaggcgg tgaggtcgtc
     1081 ctggagaacg cgatgccggt agcggaaggt gcggatcagc cgctcctcca ccgatcccga
     1141 ggccagagcc cccactgccc cgaagggaag ctcatactcg acccggtcga ccagccgcga
     1201 cgccgctctg cccctcgact cgaagcgatg cgagtgcagc cactcctgga acgggccctc
     1261 cacctggcgg tcggcgaact cgaccccggg ggcgccgccc tggtgctcgg atacccagcg
     1321 ctgatgaatc ggcccgatcg gcacctcgag caccacccgt ccgtgcagga gatcgccggt
     1381 gcgctccagc acccgcacct tgtcccacgg cggcagcagg cgctccagcg cgccgggccg
     1441 agtgtgccag tcgtaggcca cagccgcggg gacggggaga tcgacggagc gctcgaagac
     1501 tctggtcatg ccccattata gggccgctgc gccgcgccgg ggcaagcggt tcatcgtttc
     1561 agtccgatgg gtggtgcaaa acactggaca gcaccccccg aagggatact ttctcctgcg
     1621 tgagacatct ctccttcctc gcgctggcgc ttggccttgc cgcgcccgcg accgcgcagt
     1681 ccgtggcgga cagctcgccc ttccgccagc tcgaccttcc cgccgccaac accatccgca
     1741 ccggaagtgg ccggcccggc cgcgactact ggcagcagcg ggcggattac cgcatccagg
     1801 ccacgctcga tcccgacaag caggagctct cggggcggga gacgattcat tacgtcaacc
     1861 actcccccga ccggctcacc tatctctggc tccacatgga gcagaacatc tgcgagccgg
     1921 gcagcgtcac caaccagctc gatcagccgc ccctcgtctt cctcggctcc accttcgact
     1981 tctcctgcaa gggcgggcgg ggcgggctga cgctggagtc gctgaccagt ctggggcggc
     2041 cgctggcgca cacggtctac ggtaccacca tgcgggtcga gctgccgcgg ccgctggcaa
     2101 gcggggccgc gatcgatctc tcgctggcct ggcgcttcgc ggtgcccgag tccggcgcgg
     2161 gaaggatggg ccgcgacggc aatctcttcg agctgggaca gtggtatccc agggtggcgg
     2221 tgtacgacga tgtgcgagga tggaaccacg agccttacat cggggccggg gagttctatc
     2281 tcgagtacgg ttcgttcgac gtcgcggtca cggtgccggc ggcgtacacg gtcgcggcta
     2341 ccggcacgct gctcaatccg ctggaagtgt tgacgccggc ccagcgcgcc cggctggtcc
     2401 tggcccgcgc ctccgacacc gccgtcgcca tcatcaccgc cgacgaggcg gggacaccgc
     2461 ggagccgtcc gcgccagacc ggcacgctca cctggcgttt ccatgccgac agcgtccgcg
     2521 acttcgcctt cgccgcggcc cccaacttcc ggtgggatgc ctcgagctgg aaggggatcc
     2581 tggtccatac ctactaccgg cccagcgcca ccctctggac cgaggcgaac cggatggtgc
     2641 gggaggcggt gaagtactac agcgagcagt ggtaccacta tccctacgcc cacatctcca
     2701 gcatcgaagg gcccatcgaa ggcatggaat accccatgat gaccttcgat ccctcggggc
     2761 cggcgcggat cgacctccag tgggtgctgg cccacgagct gggccaccag tggaccccga
     2821 tgatcgtcgg cagcaacgag cggctctacc cctggatgga cgaagggttc aacaccttca
     2881 tcgatctcgc caacgcggcg ctctacttca agggaacgcc gtacggtgac agcatcgagg
     2941 tccacccgct ccatctttac aaggaccacg ccattcccgg gctcgagcag ccgctgatca
     3001 accggccggt cgaggtgcgc gatctcttct ggggcgggta tcagaagccg gcgctgatga
     3061 tgcagatgct ccgctacaag gtgctgggga aggagcgctt cgacgccgcc taccgcgagt
     3121 acctccggac ctgggcgttc aagcatccca ccccggccga tttcttccgg ctgatgcggg
     3181 accagtcggg gcaggaactc gactggttct ggcggagctg ggt
//
LOCUS       DATIFF010000022         3085 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1079106, whole genome shotgun sequence.
ACCESSION   DATIFF010000022 DATIFF010000000
VERSION     DATIFF010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3085
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1079106"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1525)
                     /gene="yidC"
                     /locus_tag="VLD58_00330"
     CDS             complement(<1..1525)
                     /gene="yidC"
                     /locus_tag="VLD58_00330"
                     /inference="COORDINATES: protein motif:HMM:TIGR03593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0051205 - protein insertion into membrane
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HSB52763.1"
                     /translation="MDRRAIWAILLMMVIAIAPAFFLKRPAARTAGGSGVGDSVAPAP
                     ATPAAPAAGQAPERPAGPDTGQAVREDTVLVKSPLYTYGVSTRGGRIILASLQRFHSM
                     AKETRGQPADLVRPGDGLLGGTLVRGQDTLRLADWVFAPSAQTLDVAGPTPLRLHAAR
                     GDVGVDLTYTFVPDDYRVEVAGHVSGVGPNGGLLILDLGRGFPNTEADSNENHRALAV
                     VVKDGDAERTDFASLKAGEPKTLSGPFEWVAVKSKYFVTAVLAFDSAAGRISGATATA
                     PASAGKHPTTADIRLSLPVSAAGSFSYALYAGPMEYERLGRIGHGFDDVNPYGWPGFR
                     TVIRFFTVPVRWLLVFMHDRLGMAYGLGLIVFGVLVRLLLWPLNQKAMRSSIQMQAIQ
                     PFMKEIQERYKDDPPKLQTEMMRLYKEHGVNPFGGCWPMLLPMPVLLALFFVFQNTIE
                     LRGTSFLWLPDLSRPDPYYIIPLLMGLTMFGVSRVGQMGMEQTPQMKTMLYVMPVMMT
                     "
     gene            complement(1545..1775)
                     /gene="yidD"
                     /locus_tag="VLD58_00335"
     CDS             complement(1545..1775)
                     /gene="yidD"
                     /locus_tag="VLD58_00335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002474682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HSB52764.1"
                     /translation="MDVVADLPRRGLVVLIRAYQLVISPALPPACRFTPTCSQYALEA
                     IRRHGALRGSWLAVRRLARCHPFNPGGFDAVP"
     gene            complement(1802..2155)
                     /gene="rnpA"
                     /locus_tag="VLD58_00340"
     CDS             complement(1802..2155)
                     /gene="rnpA"
                     /locus_tag="VLD58_00340"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: protein motif:HMM:NF013022.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HSB52765.1"
                     /translation="MTAAERLRRAARLARAADLRHCLTRGRRRRTEHLDMIWLDNPTG
                     HSRIGLIVPKFQSTAVARNRLRRRLKEIWRRELEARLPAWDLVVRARREAYGASFGQL
                     RAEMRNWLDSVRGAR"
     gene            complement(2152..2313)
                     /gene="rpmH"
                     /locus_tag="VLD58_00345"
     CDS             complement(2152..2313)
                     /gene="rpmH"
                     /locus_tag="VLD58_00345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HSB52766.1"
                     /translation="MKPSYRPRNKRRLNKHGFRARMATRWGQAVLSRRRKKGRKSLTV
                     HLPSKHGGR"
     gene            2444..>3085
                     /locus_tag="VLD58_00350"
     CDS             2444..>3085
                     /locus_tag="VLD58_00350"
                     /inference="COORDINATES: protein motif:HMM:NF012529.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA/Hda family protein"
                     /protein_id="HSB52767.1"
                     /translation="MQLSAKEAWKRILDEAQRELPADIIRNWLEPTEAIALDEGQLVI
                     GAPDQFAAEWNETKHASLLTRLAEPVVGRPTAVVFRVQEERQRRPQMDFFVTPTATTV
                     PAGAAANGSMQPLNERYTFETFVIGKSNELAAAAAHAIAEAPGKTYNPLFIYGATGLG
                     KTHLMQAIAHARLERAPDTRVLYVGAEQFLNEVIESIHSRTMPEFRRRYRTDVD"
BASE COUNT          523 a         1078 c         1023 g          461 t
ORIGIN      
        1 ccgtcatcat gaccggcatc acgtacagca tggtcttcat ctgcggcgtc tgctccatgc
       61 ccatctggcc gacccggctc accccgaaca tcgtcagccc catgagcagg ggaatgatgt
      121 agtacggatc cggccgggac aggtccggca gccagaggaa cgatgtgcct ctgagctcga
      181 tcgtgttctg gaacacgaag aagagcgcca gcagaaccgg catcggcagc agcatcggcc
      241 agcacccacc gaacgggttc acgccgtgct ccttgtagag ccgcatcatc tcggtctgga
      301 gcttcggcgg atcgtccttg tagcgctcct ggatctcctt catgaacggc tggatcgcct
      361 gcatctgaat gctggagcgc atggccttct ggttgagcgg ccacagcagc agcctgacga
      421 gcacgccgaa cacaatgagg ccgagcccgt aggccatgcc cagccggtcg tgcatgaaca
      481 ccagcagcca gcgcaccggc acggtgaaga accggatgac cgtccggaag ccgggccagc
      541 cgtacgggtt cacgtcgtcg aagccgtggc cgatacggcc gaggcgctcg tattccatcg
      601 ggcccgcgta gagcgcgtag gaaaagctgc cggccgcgct cacgggaagg ctgagccgga
      661 tgtcggcggt cgtcggatgc ttgcccgccg aggccggcgc cgtagccgtc gcgccgctga
      721 tccggccggc cgcgctgtcg aaggcgagca ccgcggtcac gaaatacttg gacttgaccg
      781 caacccactc gaagggtccg ctcagcgtct tcggctcgcc cgccttgagg ctcgcgaagt
      841 cggtgcgctc cgcgtccccg tccttgacga ccaccgcgag cgcgcgatgg ttctcgttgg
      901 agtcggcctc ggtgttgggg aagccacgtc cgaggtccag gatcaggagc cccccgttgg
      961 gccccacgcc cgacacgtga cccgccactt cgacccggta gtcgtcggga acaaaggtgt
     1021 aggtcagatc gacgccgacg tcgcctcgag ccgcgtgcag ccgcaacggc gtgggaccgg
     1081 cgacatcgag cgtctgcgcg ctgggcgcga acacccagtc cgccaagcgc aaggtatcct
     1141 gcccccggac cagcgtgccc ccgagcagcc cgtctcccgg acgcaccagg tccgccggct
     1201 gcccccgggt ttctttcgcc atggagtgga accgctggag cgatgcgagg atgatccgcc
     1261 ctccgcgcgt gctcaccccg taggtgtaga gcggcgactt gaccaggacg gtgtcctccc
     1321 gcacggcctg tcccgtatcg gggccggccg gccgttccgg cgcctggccg gccgcgggcg
     1381 ccgccggagt ggccggagcc ggcgccacgg aatctcccac cccggacccg cccgcagtcc
     1441 gggcggcggg gcgcttcagg aagaatgctg gcgctatcgc gatgaccatc atcagcagga
     1501 tggcccagat ggcacgacga tccatggatc ttcagctcac gggttcacgg aacggcgtcg
     1561 aagccgcccg gattgaacgg gtggcagcgg gcgagccggc gcacggcgag ccaggagccg
     1621 cgaagggctc catggcgcct gatcgcctcc agagcatact gagagcacgt tggtgtaaag
     1681 cggcaggcgg ggggcagcgc cggcgagatg accagctggt atgcccggat gagaacgacg
     1741 agcccgcgac gcgggagatc ggccacgaca tccacaagcc tgcggaccgc ccgggcgtcg
     1801 ttcaccgggc acctctcaca ctgtcgagcc agttgcgcat ctccgccctg agctgcccga
     1861 agctggcacc gtaggcttcg cgcctcgccc ggaccactag gtcccacgcc ggtaggcggg
     1921 cctcgagttc ccggcgccag atctccttca gcctgcggcg caaacgattg cgggccaccg
     1981 cagtggactg aaacttgggt acgatcagtc cgatccgcga gtggcccgtc gggttgtcca
     2041 gccagatcat gtcgaggtgc tcggtgcgac ggcggcggcc ccgcgtgagg cagtggcgaa
     2101 ggtccgccgc gcgtgcgagc cgcgcggctc gccgcagtcg ctcagccgcc gtcagcgacc
     2161 cccgtgcttc gacgggaggt gcaccgtgag gctcttccgc cccttctttc ggcggcgtga
     2221 cagcaccgcc tgcccccagc gcgtggccat gcgggcacgg aagccgtgct tgttaagacg
     2281 gcgcttgttg cgcggacgat acgacggctt catgtgcggc tttctcctcc cgatgagccc
     2341 gtgaacgtag tggcgcaagg gcccgaacgt caaggttgac ttttccacag acggcccgta
     2401 gaatcggctg cccttgcaaa ctcccacccg tagtcgagca ccgatgcagc tctccgcaaa
     2461 ggaagcatgg aagcgcatcc tcgatgaggc gcagcgcgag cttcccgctg acatcatccg
     2521 gaactggctg gagcctaccg aggcaatcgc cctcgacgaa ggccagctgg tcatcggcgc
     2581 gccggaccag ttcgcggccg agtggaacga gacgaagcat gcctcgttgt tgacccgcct
     2641 ggccgagccc gtcgtcgggc gccccacggc ggtggtcttc cgggtgcagg aggagcgcca
     2701 gcggcgcccc cagatggatt tcttcgtcac ccccacggcc accacggtgc ccgcgggggc
     2761 ggcggccaac gggagcatgc agccgctcaa cgagcggtac accttcgaga ccttcgtcat
     2821 cgggaagtcc aacgagctgg ccgcggcggc cgctcatgca atcgcggaag ctccgggcaa
     2881 gacctacaac ccgctcttca tctacggcgc caccggcctc ggcaagaccc acctgatgca
     2941 ggctatcgcc cacgcccggc tggagcgcgc cccggacacc cgggtgctct acgtcggcgc
     3001 cgagcagttt ctcaacgagg tcatcgagag catccacagc cggacgatgc cggagttccg
     3061 ccggcgctac cggaccgacg tggac
//
LOCUS       DATIFF010000023         3002 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1233068, whole genome shotgun sequence.
ACCESSION   DATIFF010000023 DATIFF010000000
VERSION     DATIFF010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3002
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1233068"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..421)
                     /locus_tag="VLD58_00355"
     CDS             complement(<1..421)
                     /locus_tag="VLD58_00355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HSB52768.1"
                     /translation="MSSPVETLVNQQYKYGFVTDIESDVAPKGLSEDVIRLISAKKRE
                     PEWLLEWRLKAYRGWLKMSEPHHWANIRYTPIDYQSISYYSAPRTAKPLGSLAEVDPK
                     LLETYAKLGIPLSEQKILAGVAVDAIFDSVSVGTTYKA"
     gene            complement(418..1107)
                     /locus_tag="VLD58_00360"
     CDS             complement(418..1107)
                     /locus_tag="VLD58_00360"
                     /inference="COORDINATES: protein motif:HMM:NF013209.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSB52769.1"
                     /translation="MATPLPLLDPEVPLGQKGQRGAVLLQLKRARELTAKDLAGRLGL
                     SLNAVRHHLKELEIEGFVAYQRENRGVGAPVFVYRLSPAGESLFPRRYGQALTAMLDH
                     VVEREGREAAVVLLESYFGALARRLRTDLVGTSPGERLMAVARALSEEGYMAEGTAES
                     SAGAATLTEHNCALPAVAERFPEICAAEARFLAEVLGARVDRREHILSGCPACEYHVR
                     FGTEGKTEEKA"
     gene            1376..1948
                     /locus_tag="VLD58_00365"
     CDS             1376..1948
                     /locus_tag="VLD58_00365"
                     /inference="COORDINATES: protein motif:HMM:NF013492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HSB52770.1"
                     /translation="MTIHRIRLLGDPILRAKCETITRPGSTAVRVIMDDMRETLRDWQ
                     SRFGAGRAISAPQIGAPVRMIYVEMDKPWPMINPEIVDIGTEDFEVWDDCFSFPNLLV
                     RVSRAYRIRVRYQDLKGAWHEVDLEGDRAELLQHEIDHLDGVLAVDRPHGLDPFCLRE
                     EWHRLYGPHRRYSHPEPRDESYVSPISESI"
     gene            complement(1958..>3002)
                     /locus_tag="VLD58_00370"
     CDS             complement(1958..>3002)
                     /locus_tag="VLD58_00370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52771.1"
                     /translation="ALERLLGFGLSDTLDPTLLRSRLRGLGVASEAYHSVWLGPRGSG
                     DSVGFDLTLRRAARRVAGLGLAYDNELGGRMWAGGVDRRLLGLALEGSGALFLGELRK
                     ELFAGFRRNYQVGRQLIDPTVTVRVASEEVRRFDSDGDELDHAETREAIGFGGVERLL
                     SQGWEVSAGLLGHVWDEPGRPELSTVGATLRVIRASRSRGRVFRSELTWTGAYQRAAL
                     EGELLTRLGVVRLTPRLRLGWGSGLPLQLGFPLGGDDGFPGLHIGERRGRREAMLAAV
                     LSVPMWGPVLARLEVAGGRTATDGGLLDGEGWVGGVRAGLGAETPVGPVRFEYGESTL
                     GRGAIYVRLGRWF"
BASE COUNT          478 a         1072 c          997 g          455 t
ORIGIN      
        1 tggccttgta ggtggtgccc accgacaccg agtcgaagat ggcgtccacc gccaccccgg
       61 ccaggatctt ctgttccgag agggggatgc cgagcttggc gtaggtctcc agcagcttgg
      121 gatcgacctc ggcgaggctc cccagcggct tggcggtgcg cggcgccgag tagtagctga
      181 tcgactggta gtcgatcggg gtgtaccgga tgttggccca gtggtggggc tcggacatct
      241 tgagccagcc gcggtaggcc ttcagccgcc attccagcag ccattccggc tcccgcttct
      301 tggccgagat gaggcggatg acatcctcgc tcagcccctt cggggccaca tccgactcga
      361 tgtcggtgac gaagccgtac ttgtactgct ggttgaccag cgtctcgacg ggtgagctca
      421 tgccttctcc tcggtcttgc cctcggtgcc gaaccgcacg tggtactcgc acgcggggca
      481 gccgctcaga atgtgctccc gccgatcgac ccgggcgccc agcacctcgg cgaggaaccg
      541 cgcttcggcg gcgcagattt cggggaaccg ctccgcgacc gcggggaggg cgcagttgtg
      601 ttcggtcagg gtggccgcgc cggcgctcga ttcggcggtg ccttcggcca tgtacccctc
      661 ttccgagagc gcccgggcca ccgccatcag ccgctctccc ggcgaagtgc cgaccagatc
      721 ggtccgcaac cgccgggcga gcgccccgaa gtaggactcc agcagcacga ccgcggcctc
      781 ccgtccttcc cgctccacga catggtccag catggcggtg agcgcctggc catagcgccg
      841 ggggaacagc gattcgcccg ccggactcag gcgatatacg aacaccggcg cccccacccc
      901 gcggttctcc cgctggtaag cgacaaaccc ctcgatctcc agttccttca gatggtgccg
      961 caccgcgttg agcgacagcc cgaggcgacc cgccaggtcc ttggcggtga gctcccgcgc
     1021 ccgcttgagc tgcagcagca ccgccccgcg ctggcccttc tggcccagcg ggacttcggg
     1081 atcgaggagg gggagtggag tcgccattgc cgaatggtaa gagccgcgat cgggattgtc
     1141 aaatcttccg agaagattgg tgcgaatatg gaacttgtta tccctaaatg gcttggggca
     1201 cagggatacg aggctggcgg gcctcaagac attggcgttc ggcagtgggt taggagtatg
     1261 acgtgcaacc tctatgccga cagtaaggtg ccagcgtctg gccagcccag ccgcgcttcc
     1321 ccatattggg agccgacttg tccgacccac gttttcggct ggaggccgaa tcccgatgac
     1381 catccatcgc atccggctcc tgggcgaccc gatcctccgt gccaagtgcg aaaccatcac
     1441 tcggcccggc tccacggccg tccgggtgat catggacgac atgcgggaaa ccttgcgcga
     1501 ctggcagtcg cgcttcggtg ccggccgagc catctcggcg ccccagatcg gcgcgccggt
     1561 ccggatgatc tacgtggaga tggacaagcc ctggcccatg atcaaccctg agatcgtgga
     1621 catcgggacc gaggatttcg aggtctggga cgactgcttc tccttcccca acctgctggt
     1681 gcgggtgtcc cgggcctacc ggatccgggt gcgctatcag gatctcaagg gggcctggca
     1741 cgaggtggac ctggagggag accgggccga gctgctgcag cacgagatcg accacctcga
     1801 cggggtgctg gcggtggacc gtcctcacgg gctggacccg ttctgtctcc gcgaagagtg
     1861 gcaccgcctg tatggccctc accggcgcta cagccacccc gagcctcggg acgagagtta
     1921 cgtgtcgccg atctcggaat cgatctaggt cccgccgcta gaaccaccgt cccaggcgca
     1981 cgtagatggc gccccgaccg agggtcgact ctccgtactc gaagcgcacc gggcccaccg
     2041 gggtttccgc cccgaggccc gcccgtaccc ctccgaccca gccttcgcca tccagcagcc
     2101 ccccatcggt cgcggtccgg ccgccggcga cttccagccg ggccagcacc ggcccccaca
     2161 tgggaaccga gagcaccgcc gccagcatcg cctcgcggcg gccgcggcgt tcgccgatat
     2221 ggagcccggg gaacccatcg tctccgccga gggggaagcc gagctggagc ggcagaccgc
     2281 tcccccatcc cagccgcagc cgcggggtga gccgcacgac ccccagccgg gtgagcagct
     2341 ctccctccag ggcggctcgc tgataggcgc cggtccaggt cagctcggag cgaaagaccc
     2401 ggccccggct ccggctggca cggatcaccc ggagggtggc gccgacggtg gagagctcgg
     2461 ggcggcccgg ctcgtcccag acgtggccga gcaggccggc ggaaacctcc cacccctggg
     2521 agaggagccg ctccacgccg ccgaagccga tcgcctcccg ggtctccgcg tggtccagct
     2581 cgtcaccatc ggagtcgaag cggcgcacct cctcgctggc aacgcgcacg gtcacggtgg
     2641 ggtcgatcaa ctggcgcccg acctgatagt tgcggcggaa gcccgcgaac aactccttcc
     2701 gcagctcgcc gaggaagagg gcgccgcttc cctcgagcgc gaggccgagc aaccggcggt
     2761 ccaccccacc tgcccacatc cgcccgccga gctcgttgtc gtaggcgagt ccgagcccgg
     2821 ccacccgccg ggcggcgcgc cgcaaggtga gatcgaagcc gaccgagtct ccggagccgc
     2881 ggggcccgag ccagaccgag tggtacgcct cggaggcgac cccgagccct cgaagacgac
     2941 tccgcagcag ggtcgggtcg agggtgtcgc tgagtccgaa tccgagcagc cgctccaggg
     3001 cc
//
LOCUS       DATIFF010000024         1332 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1386879, whole genome shotgun sequence.
ACCESSION   DATIFF010000024 DATIFF010000000
VERSION     DATIFF010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1386879"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..1246)
                     /gene="moeB"
                     /locus_tag="VLD58_00375"
     CDS             complement(104..1246)
                     /gene="moeB"
                     /locus_tag="VLD58_00375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_257790189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HSB52772.1"
                     /translation="MASSLSPAELLRYARHLSLPGVGRDGQARLKAARVVVIGAGGLG
                     SPAALYLAAAGVGTLGLVDFDRVDVTNLQRQILHQTGDVGRPKVLSGAEHLAGLNPHV
                     HVVPIEQRLSAANAREILRDFDVVVDGSDNFPTRYLVNDVCVWLQKPLVYGSIFRFEG
                     QASVFHAATGPCYRCLYAEPPPPELVPNCAEGGVLGVLPGVIGSIQALEAIKLVLGEG
                     TSLIGRLVVFDALGLHFRELRLAKDPECPVCGLQPSITQPVDYEAFCAGVGHDAVEDA
                     EISSRDLAAALQDRAGSVQIVDVREPWEWELARIEGASLLPLGELPGRLAEVDPRVDI
                     VTVCHHGLRSLHARELLRAAGFTRVRSLAGGIDQWARDVEPDMARY"
BASE COUNT          229 a          477 c          439 g          187 t
ORIGIN      
        1 gggttcgagt ccccccttcg gcatgacacc ggtgaacagc gaacgggggg ctgccctgac
       61 cgggtgcccc ccgttcatcg tttcccgccg ccgttcagcc tgttcaatat ctcgccatat
      121 caggctcgac atcccgggcc cactggtcaa tgccgcctgc aagactccgc acccgggtga
      181 agccggccgc acggagcagc tcacgagcat gcagtgaccg caacccgtga tgacaaacgg
      241 tgacgatgtc cactcgaggg tccacttcgg ccagcctgcc gggcagctcg cccagcggga
      301 gcagcgatgc gccctcgatt cgggccagct cccattccca cggctcccgc acgtccacga
      361 tctgcaccga tccggcccgg tcctggagcg cggcggccag gtcgcgggat gatatctcgg
      421 catcctccac cgcgtcatgc ccgacccctg cgcagaacgc ctcgtagtcg accggctggg
      481 tgatcgacgg ctggaggccg caaaccgggc actccggatc cttggccagt cgcagctccc
      541 ggaagtgcag gccgagggca tcgaacacga ccaggcgacc gatcagcgag gtcccctcgc
      601 ccagcaccag cttgatcgct tccagcgcct ggatgctgcc gatgacaccc ggcagcaccc
      661 cgaggacgcc gccctccgcg cagttgggca ccagctccgg cggcggcggc tcggcgtaga
      721 ggcagcgata gcacggaccc gttgccgcgt gaaagaccga agcctggccc tcgaagcgga
      781 atatgctccc gtacaccagc ggcttctgca gccagacgca gacgtcgttc accagatagc
      841 gggtggggaa gttgtcgcta ccgtctacga cgacatcgaa gtcccggaga atctcgcggg
      901 cgttggccgc gctgagccgc tgctcgatgg ggaccacatg cacgtgcggg ttcaggccgg
      961 cgaggtgctc cgcgcccgag aggaccttcg gccggccgac gtccccggtc tggtggagga
     1021 tctggcgctg gaggttggtg acgtccaccc ggtcgaagtc caccaggccg agcgtcccga
     1081 ccccggccgc cgccagatac agcgccgccg gcgagccgag cccgccggcg ccgatgacca
     1141 cgacccgggc ggccttgagc cgcgcctgcc cgtcgcggcc cacgccgggc aacgataggt
     1201 ggcgcgcgta acgaagcagc tcggccggcg agagggagga ggccatggca gaaagatagt
     1261 gagaagtcag aagcgagaag gggccggcgg gtgcatcccg gggccccctg tcacagctca
     1321 cttcttactt ct
//
LOCUS       DATIFF010000025         1546 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2156318, whole genome shotgun sequence.
ACCESSION   DATIFF010000025 DATIFF010000000
VERSION     DATIFF010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2156318"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1546)
                     /locus_tag="VLD58_00380"
     CDS             complement(<1..>1546)
                     /locus_tag="VLD58_00380"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: protein motif:HMM:NF012532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HSB52773.1"
                     /translation="SLFEATSELLEKLDRLLVQLWPGEQFIIPPFFQFGSWIGGDRDG
                     NPYVTNDVTRRTLHENRLASLYRYRQRLGELLKTLSITDRALEVTPAFREALDRVLTT
                     TGEAQQIVGRNPGEVFRQFLACMMLRLDGAIRHGERPDPSAAPGGYASAEELLGDLRI
                     LEAALREGGSVKLAAALVRPVRREVETFRFSTVRLDLRENSTRTTQAVVALWRLATGS
                     EGTPPPVASDEWKAWLQAELARPLKGERAPETLPEEAQETLGMFRLVREMRADLDREA
                     FGSFVLSMTREVADVLGVYLLAKEAGLFADQAGVESCTLPIVPLFETIEDLHRAPAIM
                     RELLGMPMVRRSVRALGGTQEVMIGYSDSNKDGGFLPSNWELAKAQIRLTRLGQELGV
                     PISFFHGRGGSVSRGGAPLGRAIAAQPAGSIKGRMRLTEQGEVVSFKYANRGTAQYQV
                     ELLTASVIEHSLRSEHEAALVPTSEFDEAMEALSGAAQAAYRRFVERPDLITYFTAAS
                     PLEELTL"
BASE COUNT          232 a          565 c          511 g          238 t
ORIGIN      
        1 agagtcagct cctcgagcgg gctcgcggcg gtgaagtagg tgatgaggtc gggccgttcg
       61 acgaaccggc ggtaggccgc ctgggcggcg ccggacaggg cctccattgc ctcgtcgaac
      121 tcgctggtgg gcaccagcgc ggcctcgtgc tccgagcgca gcgagtgctc gatcacgctt
      181 gccgtgagca actccacctg gtattgggcg gtcccccggt tggcgtactt gaaggaaacc
      241 acctcgccct gctcggtcag ccgcatgcgg cccttgatgg agccggcggg ctgggcggcg
      301 atggcccggc ccagcggggc accgcccctg cttaccgacc cgccccgtcc gtggaagaac
      361 gagatcggca cgcccagctc ctgtcccagc cgggtgagcc ggatctgcgc cttggccaac
      421 tcccagttgg agggaaggaa cccgccgtcc ttgttggagt cggagtaccc gatcatgact
      481 tcctgggtcc cgcccagggc gcgcaccgac cggcgcacca tcggcatccc cagcagctcg
      541 cgcatgatgg ccggcgcgcg atgcagatcc tcgatggtct cgaacagcgg cacgatcggc
      601 agggtgcagc tctccactcc ggcctgatcg gcgaacagtc ccgcctcctt ggccagcagg
      661 tagacgccga gcacatccgc cacctcgcgg gtcatgctga ggacgaagct gccgaacgcc
      721 tcccggtcca ggtcggcgcg catctcgcgc accaaccgga acatccccag ggtctcctgc
      781 gcctcctcgg ggagcgtctc cggcgcccgc tcgcccttga ggggccgcgc cagctcggcc
      841 tggagccacg ccttccattc gtcggaagca accggcggcg gcgttccctc ggacccggtt
      901 gccagtcgcc acagcgccac caccgcctgg gtggtccggg tggagttctc ccggaggtcc
      961 agccgcacgg tgctgaaccg gaacgtctcc acttcgcgcc gcaccggacg gaccagcgcg
     1021 gcggccagct tcacgctgcc cccctccctg agtgcggcct ccagaatccg gaggtcgccc
     1081 agcagctcct ccgctgacgc gtacccgccg ggcgccgcgg aaggatccgg ccgctcgccg
     1141 tgacggatcg ccccgtccag ccgcaacatc atgcaggcca ggaactggcg gaacacctcg
     1201 cccggattgc ggccgacgat ctgctgcgct tcaccggtgg tcgtcagcac tcggtcgagc
     1261 gcctcgcgga acgccggcgt cacttccagc gcccggtccg tgatgctcag ggtcttgagc
     1321 agctcgccca gccgctgccg atatcggtac aggctggcca ggcggttctc atgcagcgtc
     1381 cggcgggtga cgtcgttggt gacgtaggga ttgccgtccc gatcgccccc gatccaggat
     1441 ccgaactgga agaacggggg gatgatgaac tgctcgccgg gccagagctg gaccagcaac
     1501 cggtccagct tctcgagcag ctcgctcgtt gcctcgaaca gggatt
//
LOCUS       DATIFF010000026         4834 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1079310, whole genome shotgun sequence.
ACCESSION   DATIFF010000026 DATIFF010000000
VERSION     DATIFF010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4834
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1079310"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..566)
                     /locus_tag="VLD58_00385"
     CDS             complement(<1..566)
                     /locus_tag="VLD58_00385"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HSB52774.1"
                     /translation="MADAVRRLAAARGIGRLREPAPIREELVELGRALVFDKILSGNH
                     DISCMTCHLPALATGDGRSLSIGQGASGLGTTRVHPTGAFIPRNAPSLFNLGALTSLF
                     WDGRVANDGSGGVRTPAGNQVTPEMARVFEFGPVSALGLFPVTSRAEMRADEGNELAA
                     IPDQDNPGIWRALMARLGRIPGYRRMFEA"
     gene            complement(785..3580)
                     /locus_tag="VLD58_00390"
     CDS             complement(785..3580)
                     /locus_tag="VLD58_00390"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB52775.1"
                     /translation="MSVSEPSNATGRRPGAGSTRRSTLTTPADRFRQVDAIFDEALDL
                     DAIERVAYVERACAGDDGLKAAVLRLLEAHRQSERFLDRPALPFAGSIVKGSEDLLDG
                     ITPDPMPERIDQFRIVGLLGRGGMGQVYLGERDDGQFGQRVALKVMQRLSPRLMRRFL
                     DERRILAQLEHPGIARLVDGGVSDEGRPYFAMELVEGEAIDRYCDSHLLDLDARLDLF
                     AAACDAVGYAHQHLVVHRDLKPSNILVAGDGRVKLVDFGIAKALGPADGGSDLTGTGE
                     YLMTPEFAAPEQTRGEPVTTGTDVYALGVLLYLLLSGRHPYELRGLSPAAIERVISEV
                     EPLPPSATFTGPRWAGDAPARARARGSAPERLRRRIHGDLDAIVMKALRKEPGRRYPS
                     VAAFRADLEHFRSGRPVQARPDSPLYRLAKFVGRNRVAVSAGLVATAVLVLAAVFSAV
                     QMHEARRQRDTAVREARQHEAMAEIQTVLAGDMRGADGRPLPANERIFLAERVLTSRY
                     KAEPWLIASVALGLGEQLVSTGDREGSRALLARARAVALGAGLPGDVAVIDCSRAETF
                     AYDDQMDSAASLLAEAAAAMAQVREPSPAMQMSCLLSEGTYNLAAGRPDSAVALQSRA
                     VALSHLLPPGRVRLMPEFRLAEALRGAGRTREASEHQRQILVGLESAGYLGSDELPTM
                     VEQLASTLSELGELAVFDSVVSATMLQVGALRGQQSSGVLNFLHGLALLRLGELDSAE
                     VWFSVARRDTTEGAGGLAWYLPPATTQLLVEQGRIAEARRSLPALPTGTRFRRATGAW
                     LRARILRAEGQRQQAARLLEDTLAVLWGGTPATALSLPFVTAAEWRLEAGDARGADSL
                     ATLGRAAAAVDSLALRRSAYAGRAELVRARALVQLGDSAGGRLAAENAVSALAIGYGP
                     TRPLTKAAQALRDSLFR"
     gene            complement(3495..4109)
                     /locus_tag="VLD58_00395"
     CDS             complement(3495..4109)
                     /locus_tag="VLD58_00395"
                     /inference="COORDINATES: protein motif:HMM:TIGR02999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSB52776.1"
                     /translation="MTLATSPGPQQIGLGAQMNPCTDLLLRAHDGDPAAVSAIFPLIY
                     EDLRHLAHRQLSREGPGHTLSTTALVHEAYLRLIDQNRVQWQSRAHFLAIAATAMRRI
                     LIDRARRHLADKRGGQLNRVPLETVDLGAEDRADVLVALDEALERLKALNHRQARIVE
                     CRFFGGLTEEETAEALGVGLRTVKRDWAKARSWLYQEIYPDYAG"
     gene            complement(4131..>4834)
                     /locus_tag="VLD58_00400"
     CDS             complement(4131..>4834)
                     /locus_tag="VLD58_00400"
                     /inference="COORDINATES: protein motif:HMM:NF016825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cyclodeaminase/cyclohydrolase family protein"
                     /protein_id="HSB52777.1"
                     /translation="GLDELAPFNPEERIIEYQLRKAGDRKLAGMTVAAFADETASESP
                     APGGGSVAALLGSLGAALGTMVANLSSHKPGWDERWEEFSRWAERGQRIKDQLLRLMD
                     EDTQAFNRVMTALGMPKGTPEEKAARKAALDRANQGAIEVPFRVMQVASEAFALLEAM
                     AMSGNPASVSDAGVGVLCVRAAIRGAWLNVRINLSGLADKASAASMVAEGEQLVQRAE
                     ERERAILALVEKKIG"
BASE COUNT          798 a         1712 c         1577 g          747 t
ORIGIN      
        1 gcctcgaaca tccggcgata gcccggaatc ctacccagtc gggccatcag cgcccgccag
       61 atcccgggat tgtcctggtc gggaatggca gccagctcgt tgccttcgtc ggcccgcatt
      121 tcggcccggg aggtcaccgg aaagaggccc agcgccgaca cgggcccgaa ctcaaagacc
      181 cgcgccattt ctggtgtgac ctggttgccc gccggcgtcc tgacaccccc ggaaccgtcg
      241 ttggccaccc gaccgtccca gaacagcgag gtgagcgcac cgagattgaa gagagatggt
      301 gcgtttctag ggatgaacgc gccggtggga tggacccgcg ttgtccccag tccgctcgcg
      361 ccctgcccga tggacaagct ccgcccgtcc ccggtcgcca gcgccggaag atgacaggtc
      421 atgcacgaga tgtcgtggtt cccgctcaga atcttgtcga agaccagcgc ccggcccagc
      481 tctaccagtt cctccctgat cggtgccggc tccctgagcc ggccaatccc gcgggcagcg
      541 gcgagccgcc tgaccgcgtc agccattgcg ctcttggcgg ccgccggatg cgaggccgaa
      601 tcgagcgcac tgcccgaagg cccggaaggg gtgtcatcgg gagacccaca cgacgccatg
      661 agcccgacaa cgacaagagc gccgaacggc aagaggcgac gcgacagcat ggttcctcca
      721 ctggagcggg taactgttgg tcccttaccc ggtacgcgaa atccgggcgc aaatcgagcc
      781 acggtcagcg gaagagggag tcgcggagag cctgggcggc cttggtaaga ggccgggtgg
      841 gaccataacc gatggccagg gcggatacgg cattctcggc ggcgagccgg ccaccggcac
      901 tgtcgcccag ctggaccagg gcccgggctc ggaccaactc ggcccggccg gcgtaggcgc
      961 tccgtcgcag agcgagcgag tcgactgcgg ctgcggcacg acccagggtc gcgagggagt
     1021 ccgcaccccg ggcgtctccg gcttccagtc gccactccgc tgcggtgaca aagggcaggg
     1081 acagcgccgt cgccggagta cctccccata gaacggccag ggtgtcctcc agcagccgcg
     1141 ccgcctgttg gcgttgtcct tcggcgcgga gaatccgggc ccggagccac gcgccggtgg
     1201 ctcggcggaa gcgagtaccg gtggggagcg ccggaaggct ccggcgggcc tccgcgatgc
     1261 ggccctgttc caccaggagt tgcgtcgtcg ctggtggcag gtaccaggcc aggccacctg
     1321 ccccctccgt agtgtctcgt ctggccaccg agaaccacac ctcggcggag tccagctcgc
     1381 ccagacggag gagggccagt ccatgcagga agttgagtac cccgctcgac tgctggcctc
     1441 ggagcgcgcc aacttgcagc atcgtagcac tgaccaccga atcgaacacg gccagctcac
     1501 ccagctcact gagcgtggat gccagctgtt cgaccatggt tggcagctca tcgctgccga
     1561 ggtatcccgc cgactcgagg ccgacgagga tttgccgctg atgctcactg gcttcccggg
     1621 tccgcccggc tccccgcagc gcctcggcca ggcggaattc cggcattagg cgcacccgtc
     1681 ccggaggaag caggtgactc agggcgaccg cccggctctg cagtgcgaca gcggagtcag
     1741 gccgccccgc cgccagattg taggtcccct ccgatagcag acaactcatc tgcattgcgg
     1801 gtgaaggctc tcgcacctgc gccatcgccg cggcggcctc tgccagcaac gaggcggccg
     1861 aatccatctg atcgtcatag gcgaaggttt cggcccgtga acagtcgatc accgcgacat
     1921 caccgggcaa cccggccccc agcgccacgg cccgcgcccg ggccagcagg gcccgcgagc
     1981 cttccctatc gccggtcgac accagctgct cgcccagccc tagcgccacc gaggcgatga
     2041 gccacggctc ggccttgtaa cggctcgtca gcacccgctc ggcaaggaag atcctttcgt
     2101 tagccggcag cggccgtccg tcggcgccac gcatatcccc ggccagaact gtctggatct
     2161 cggccatcgc ttcatgctgc cgagcctccc ggaccgcggt atcccgttgt cggcgggctt
     2221 cgtgcatctg cacggctgag aacacggctg ccagcaccag gacggcggtc gccacaaggc
     2281 cggcgctgac agccacccga ttccggccga cgaacttggc caaccggtaa agcggactgt
     2341 ccggccgggc ctggacggga cgcccgctgc gaaagtgttc gaggtcggcg cgaaacgccg
     2401 ctaccgacgg gtatctcctg ccgggctcct tccggagtgc tttcatcacg atggcatcga
     2461 ggtcgccgtg gatccggcga cggagccgct ccggcgcgct gcctcgcgcg cgggcccgtg
     2521 ccggagcatc gcctgcccac cgtggaccgg tgaacgtcgc cgagggagga agcggctcga
     2581 cctcggagat cacccgctct atcgcggcgg gcgacaagcc tcgcagctcg tacggatggc
     2641 ggccggaaag gaggagatag agcaggacgc ccagtgcata gacgtccgtc ccggtggtga
     2701 ccggctcgcc tcgggtctgt tccggcgcgg cgaactccgg ggtcatcagg tattcgccag
     2761 tgccggtgag gtcactgccg ccatcagcag gcccgagcgc cttggcgatc ccgaagtcga
     2821 ccagcttcac ccgcccgtcg cccgccacca ggatgttgga gggcttgagg tctcggtgta
     2881 ccaccaggtg ctggtgggcg tagcccacgg catcgcaggc ggcggcgaag aggtcgagcc
     2941 gggcatccag atccaaaaga tggctgtcgc agtagcgatc gatcgcctcc ccttcgacca
     3001 actccatcgc aaagtagggc cggccctcat cgcttacccc gccatcgacc agccgggcga
     3061 taccggggtg ctcgagctgc gccaggatgc gccgttcgtc gaggaagcgc cgcatcaatc
     3121 gaggcgacag ccgctgcatc actttgaggg ccacgcgctg accgaactgg ccgtcgtcac
     3181 gctcgcccag atacacctgg cccatgccgc cgcgacccag caagcccacg attctgaact
     3241 ggtcgattcg ttcgggcatg ggatcagggg tgatgccgtc gagcagatcc tcactccctt
     3301 tcacaatcga gccggcgaat ggcagggcgg gccggtcgag aaagcgctcc gactgccggt
     3361 gggcctcgag cagccggaga accgcggcct tgagcccgtc gtcgccggca caggcacgct
     3421 cgacataggc cacccgttca atggcgtcga gatcgagcgc ctcgtcgaag atcgcgtcga
     3481 cctggcggaa gcgatcagcc ggcgtagtca gggtagatct cctggtagag ccagctccgg
     3541 gccttcgccc agtcgcgttt gacggttcgg agaccgacac caagcgcctc ggcggtctcc
     3601 tcctctgtca ggccgccgaa gaagcggcac tcgacaattc gggcttgccg gtggttgagc
     3661 gctttgagcc gttccagcgc ctcatccagc gccaccagca catcggccct gtcctccgcg
     3721 ccgaggtcga ccgtttccag cgggacccga ttgagttgcc caccgcgctt gtcggcgaga
     3781 tgacggcggg cccggtctat caggatcctg cgcatggcgg tggccgcgat ggccaggaaa
     3841 tgcgcccggc tttgccactg cacccggttc tgatcgatga gtcggaggta cgcttcgtgg
     3901 accagggcgg tggtgctcaa ggtgtgcccc ggtccttccc ggctgagctg gcggtgggcc
     3961 agatgccgga ggtcttcgta gatgagggga aaaatcgcac tgacggcggc agggtcgccg
     4021 tcgtgggcac gaagcaggag gtcggtgcaa gggttcatct gggcccccag cccaatctgc
     4081 tgcgggcccg gactcgtggc cagtgtcatg cctggctcgg cgcccgaagc ctacccgatc
     4141 ttcttctcta ccaacgcgag aatggcacgc tcgcgctctt cggcgcgctg taccaactgt
     4201 tcaccctcgg ctaccatgct cgccgccgac gccttgtcgg ccagtccgct gagattgatc
     4261 cgcacattga gccacgcgcc ccggatcgcc gcccgcacac agagcacccc cacccccgca
     4321 tccgacaccg atgccggatt cccgctcata gccatcgcct ccagcagcgc aaaggcctcc
     4381 gaggccacct gcatcacccg gaacggcacc tcgatcgcgc cctgattggc ccggtcgagc
     4441 gccgccttgc gcgccgcctt ttcctccggc gtgcccttcg gcatgccgag cgccgtcatg
     4501 acccgattga aggcctgggt atcctcatcc atgaggcgca gcagctggtc cttgatccgc
     4561 tgtccccgct cggcccagcg ggagaactcc tcccaccgct cgtcccaccc cggcttgtgg
     4621 gaggagagat tggccaccat ggtgccaagc gccgcgccga gggagccgag cagggcagct
     4681 actgaaccgc cgccgggggc agggctctcg cttgcagtct cgtcggcgaa ggcagccacg
     4741 gtcatcccgg ccagtttccg gtcgccggcc ttccggagct ggtattcgat gatccgctcc
     4801 tccgggttga agggcgccag ctcgtcgagt ccca
//
LOCUS       DATIFF010000027         1484 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_771822, whole genome shotgun sequence.
ACCESSION   DATIFF010000027 DATIFF010000000
VERSION     DATIFF010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1484
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_771822"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..423)
                     /locus_tag="VLD58_00405"
     CDS             complement(<1..423)
                     /locus_tag="VLD58_00405"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSB52778.1"
                     /translation="MSIDSAHQPTLSVIIPVFNEITTIARLLARVEAVPVDKEIVLVD
                     DGSTDGTTEALRALATDRGHRVLIHEKNQGKGAALRTGFAAARGRIVIVQDGDLEYNP
                     AEYPKLIAPILDDRADVVYGSRFAGGESHRVLRFWHYTM"
     gene            complement(420..>1484)
                     /locus_tag="VLD58_00410"
     CDS             complement(420..>1484)
                     /locus_tag="VLD58_00410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSB52779.1"
                     /translation="VMWPLLLVPLGWAVPTQKSSKESREETLRLFLILSAELVVYLAI
                     RQAVVGGFAGDLQHPLWRGTTFGTRAITMLAAIPVWSRLLLWPAHLQADYAPQELMLA
                     HGLGPDQWLGLFLLVALAGLFVVSWRRMPVAAAGLAWTVLAVAPVANLVTPTGIVLAE
                     RTLFLPSFGLVLAVGAMAAALEARVPGTSRWARPVIGALALVLCLLGVARSAVRLPVW
                     RDNTTLFGTTVVDAPRSYWAWRNWAGDLVLTDHPAEARAAYQHSLALFDRDPTVYDDL
                     ASFERRSGRCDLAIAHFRASLAIDSTRYMTTSRLIGCLTLVGDYDAARALARGAMAAG
                     RKEFGSLLQLVDSVAAAQPR"
BASE COUNT          255 a          522 c          509 g          198 t
ORIGIN      
        1 catggtgtag tgccagaagc ggagcactcg gtgcgattct ccgccggcga agcgcgaccc
       61 atacaccaca tcggcacggt cgtcgaggat cggcgcgatg agcttcggat actcggccgg
      121 attgtactcg agatcgccgt cctggacgat cacgatccgg ccgcgcgcgg ccgcgaaccc
      181 ggtccggagc gcggcgccct tcccctggtt cttctcgtga atcagaaccc ggtgtccccg
      241 gtccgtcgcc agcgcgcgca gcgcctcggt cgtgccgtcg gtcgagccgt cgtccaccag
      301 cacgatctcc ttgtcaaccg gtaccgcctc gaccctcgcg agcaggcgcg cgatcgtggt
      361 gatctcgttg aagaccggga tgatgacgga cagggtcggc tggtgcgcgg aatcgatgct
      421 catcggggct gggcggcggc gacgctgtcc accagttgga gcaggctgcc gaattccttg
      481 cgccccgccg ccatggcgcc gcgggcaagg gccctggcgg cgtcgtagtc gccaaccagg
      541 gtgaggcagc cgatcagacg ggaggtggtc atatacctcg tggagtcgat cgcgagcgac
      601 gcgcgaaaat gcgctatggc gagatcacat cggccgctgc gccgctcgaa gctcgcgaga
      661 tcatcataga cggtgggatc gcgatcaaac agggccaggc tgtgctggta agcggcgcgg
      721 gcctcagccg gatggtccgt gagtaccagg tcccccgccc agttgcgcca cgcccagtag
      781 ctccggggcg catccacgac ggtcgtgccg aacagggtgg tgttgtcgcg ccagacgggg
      841 agcctcactg cgctccgcgc gacgccgagg aggcagagga cgagcgccag ggccccgatg
      901 accggccgag cccagcgact ggtgcccgga acccgggcct cgagggcggc ggccatcgcg
      961 ccgacggcaa gcaccagccc gaaactgggg agaaacagcg tccgctccgc gagcacgatg
     1021 ccggtcggcg tcaccaggtt ggccaccggc gccaccgcca gcacggtcca cgcgaggccc
     1081 gcagccgcca cgggcatccg ccgccagctc accacgaaca gaccggccag cgccacgagc
     1141 aggaagagac ccagccactg gtcgggtccc aggccgtggg cgagcatcag ctcctgcggc
     1201 gcgtagtccg cctgcaggtg cgccggccag agcagcaacc tgctccagac ggggatggca
     1261 gccagcatgg tgatcgcccg cgtcccgaag gtcgtcccgc gccagagcgg atgctgcagg
     1321 tcgcccgcga atccgccgac caccgcctgc cggatcgcca ggtacaccac cagctcggcg
     1381 gagagaatca ggaagagccg cagtgtctcc tcccggcttt ccttcgaaga cttctgcgtc
     1441 ggcacggccc atccgagcgg caccagcagg agcggccaca tcac
//
LOCUS       DATIFF010000028         1698 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_772285, whole genome shotgun sequence.
ACCESSION   DATIFF010000028 DATIFF010000000
VERSION     DATIFF010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1698
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_772285"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..308)
                     /locus_tag="VLD58_00415"
     CDS             complement(<1..308)
                     /locus_tag="VLD58_00415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52780.1"
                     /translation="MRPERLEQLLSELAAGHTTPADALERLRHFPTESLSFAQLDHHR
                     TLRQGHPEVVFCAGKTVEQVTAICERLAANGGSFLGTRATPEQAEALGRRWAGLEWNP
                     L"
     gene            complement(305..1288)
                     /gene="dusB"
                     /locus_tag="VLD58_00420"
     CDS             complement(305..1288)
                     /gene="dusB"
                     /locus_tag="VLD58_00420"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HSB52781.1"
                     /translation="MRLPYFSGSSTPLLLAPMAGVSEAPFRQICRQMGADVVLSEFLS
                     SEAIRRRIKRTLEGADFEECERPIGIQIYGSDPAAMAEATRLITEHYKPEFIDINFGC
                     PVKKVVQRNGGSGCLRDLSLVEQIIKGCVAATHLPVTVKTRSGWSDELRDPVGIALRM
                     QDAGAKAFTLHARTRTQMFSGKANWDEIARVVEALDIPVIGNGDIQTADDVVRMVEHT
                     RAAAVMVGRGSFGNPWLFRDARALLAGEPRPPAPTAAERFSVALEHARLAIRLQGDSR
                     KTVIEFRKHFGWYTKGLHSASELRGRLFQVESMAEAEAIFGEYLAPVASVA"
BASE COUNT          273 a          627 c          545 g          253 t
ORIGIN      
        1 agcgggttcc actccagccc ggcccagcgc cggcccaggg cctccgcctg ctccggggtg
       61 gcccgggtgc cgaggaagct accgccattg gccgccagcc gctcgcagat ggcggtcacc
      121 tgctctaccg tcttaccggc gcagaacacc acttcgggat gcccctggcg gagcgtccgg
      181 tggtgatcca gttgggcgaa gctcagggac tcggtgggaa agtgccgcag ccgctccagc
      241 gcatcggccg gggtggtgtg cccggcggcg agctcgctga gcagctgctc cagccgctcg
      301 ggcctcacgc cacgctggcg accggcgcca ggtactcgcc gaagatcgcc tccgcctcgg
      361 ccatggactc cacctggaag agccggcccc gcagctcgct cgcgctgtgc agccccttgg
      421 tgtaccagcc gaaatgcttg cggaactcga tcacggtctt gcggctgtca ccctggagcc
      481 tgatcgcgag ccgggcatgc tcgagcgcca cgctgaaccg ctcggcggca gtcggcgccg
      541 ggggccgcgg ctcacccgcg agcagcgccc gagcatcccg gaagagccac gggttgccga
      601 aggagccgcg cccgaccatc accgccgcag cgcgagtgtg ctcgaccatc cgcaccacgt
      661 catcggccgt ctggatgtcg ccattaccga tgaccgggat atcgagcgcc tcgaccaccc
      721 tggcaatctc gtcccagttg gccttgccgc tgaacatctg cgtccgggtc cgggcgtgca
      781 gggtgaacgc cttggcgccg gcatcctgca tccggagcgc aatgcccacc gggtcgcgga
      841 gctcgtcgct ccagccgctc cgggtcttca cggtgaccgg gagatgggtc gcggccacac
      901 agcccttgat gatctgctcc accagcgaca ggtcccggag acagcccgag ccgccgttcc
      961 gctgcaccac cttcttcacc gggcaaccga agttgatgtc gatgaattcc ggcttgtagt
     1021 gctcggtgat gaggcgggtg gcttcggcca tcgcggcagg atccgacccg taaatctgga
     1081 tgccgatcgg gcgctcgcac tcctcgaagt ccgcgccttc cagcgtccgc ttgatacgcc
     1141 gccggatggc ctcggagctc aggaactccg acaacaccac atccgcgccc atctgccggc
     1201 agatctgccg gaacggggct tcagacaccc cggccatcgg ggcgaggagg agtggcgtgc
     1261 tggagccgga gaagtacggt aaccgcatgg gatcaaaata cttgcgcaac aaccccgtga
     1321 caactgcccg gggaattcac gggcatccct cctcccgctc ccgccggacc ggcccgtcga
     1381 tcggcgccga gggctcgaac gtttccaccc cggccctctc gcgcccatac agaatcaccg
     1441 cacggcgaaa gagccttact gaatcccccc tggggccagt cgaacacccg gacccgtacc
     1501 tcgggcgagc ccgtgccgct gtggttgacc accagcaggt cgacggggcc cctcgccacc
     1561 gaccagctcc accccccgcc tcgcccgata ccggcaatga agcggggccc gtcagctgcg
     1621 tgttgctcga agcggatgag gccgccagga cgggaatgca ccaccgtctg gagcgcggtg
     1681 ccgggcccct cgactgag
//
LOCUS       DATIFF010000029         1199 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1541797, whole genome shotgun sequence.
ACCESSION   DATIFF010000029 DATIFF010000000
VERSION     DATIFF010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1541797"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..935)
                     /locus_tag="VLD58_00425"
     CDS             complement(<1..935)
                     /locus_tag="VLD58_00425"
                     /inference="COORDINATES: protein motif:HMM:NF021665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="G8 domain-containing protein"
                     /protein_id="HSB52782.1"
                     /translation="MRHAPGRFALAFALLLSACSADSNSPTGPGGPPVGTLKPWSDPA
                     TWPSGVVPAAGDSVVIPAGLSVQLDTTPPALGSLTIDGALVFGSRDLALTADWILVDG
                     SLQAGTETSPWTHQAVITLTGSSSGPNVAGMGNKMIGVMGRIELHGEKRAGWTHLSAT
                     AAQGATSIALERNPGWRAGDRIVLASSDYNQNQAEEAVIATVSGTAITLTAPLAHHHY
                     GQVLTVSGVSVDERAEVGLLTRNIRIQGDTVVGAGFGGHMMVMAGGVAKIEGVELFRM
                     GQRSHLARYPMHWHMAGDVTGQYFRNSSVWRTFSR"
BASE COUNT          176 a          403 c          439 g          181 t
ORIGIN      
        1 cagcggctga aggtccgcca gacgctgctg ttgcggaagt actggccggt gacgtcgccc
       61 gccatgtgcc agtgcatcgg gtagcgcgcg aggtggctgc gctggcccat ccggaacagc
      121 tccaccccct cgatcttcgc caccccgccg gccatgacca tcatgtggcc gccgaagccg
      181 gcgccgacga cggtgtcgcc ctgaatgcgg atgttccggg tcagcagtcc gacctccgcc
      241 cgctcgtcga cgctcactcc gctcaccgtg aggacctgcc cgtagtggtg gtgggcgagg
      301 ggggcggtga gcgtgatcgc cgtgccgctc accgtggcga tcaccgcctc ctccgcctgg
      361 ttctggttgt agtcgctcga ggcgagcacg atgcggtcgc cagctcgcca gccgggattc
      421 cgctccaggg cgatgctcgt ggcgccttgg gcggcagtcg cactcaggtg ggtccatccc
      481 gcccgcttct ccccatggag ttcgatgcgg cccatgacgc cgatcatctt gttgcccatg
      541 ccggccacgt tggggccgct ggaactcccg gtcagggtga tgacggcctg atgggtccac
      601 gggctggtct cggtcccggc ctgcaggctg ccgtcgacca ggatccagtc ggccgtcagg
      661 gcgagatccc ggctgccgaa gaccagcgcc ccgtcgatcg tcaggctccc gagcgccggc
      721 ggggtggtgt cgagctggac cgacaggccc gcggggatca cgaccgaatc accggcggcc
      781 ggcaccacgc cggagggcca ggtggcggga tcggaccagg gcttgagcgt cccgaccggc
      841 ggaccgcccg gcccggtggg ggagttcgag tcggcgctgc aggcggagag cagcagggcg
      901 aatgcaagcg cgaagcgacc gggagcgtgt cgcatcggga gacctcgatg acgctgggaa
      961 gggcgactgg cggagccccg aacggggccg gaacggctac atgatcaggg ggcgctggcg
     1021 gctgcacaac tcgcaggaat tgccggtgtc acggaatgcg acgggccgac tgcacgctgc
     1081 cgctgagtga tccgaatcac ccgcagcttg agcctcgtct ggagtggcga tcgcgaggtg
     1141 gcccgggacc tgcccattcc cgcagggaat cggcgtttgg gggaaaaccc cggcgcatc
//
LOCUS       DATIFF010000030         6015 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1695850, whole genome shotgun sequence.
ACCESSION   DATIFF010000030 DATIFF010000000
VERSION     DATIFF010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6015
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1695850"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1436)
                     /locus_tag="VLD58_00430"
     CDS             complement(<1..1436)
                     /locus_tag="VLD58_00430"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB52783.1"
                     /translation="MTRDLKYALRSLRRTPAFTLIAALTLALGIGANTAIFSVFYGVL
                     LRPLSYPEAERLVQLAEVAPGYRGEMSLTYRQFQYLRDRGEIFSAVTATTPVGFNLAN
                     GNEAFRAAGLRVSQSYFEVLGVQPSLGRGFAADEDVEGGAAAVVLSHGLWQRRFGGDP
                     AIVGKTVSLDGVPHTVVGVMPADFRSLPAVEAWTTLAQVGRTIGSGQNLEMIGRLKPG
                     LSLSQAQGRITGTVASFREEFKANLPEEVKLELLPYRQLIVSDVSRPIRVLVGAIMFV
                     LLIACANVASLVLSRGIGRARELAMRLALGAGRGALVRQLLTESLVLALLGGVLGVVI
                     AVWGLQSMLQFLPGDVPLTDGIQLDGRALAFAFVLSLLTGVAFGLLPAWQVARVDPQR
                     VLKDGGWRNTGGKEHGRLRDTLVVAEIALSLVLLTGAGLLGRTFANLMSTDAGFDVDR
                     VLSAEIWLTGSRHEADASVPQFYRELIE"
     gene            complement(1461..3893)
                     /locus_tag="VLD58_00435"
     CDS             complement(1461..3893)
                     /locus_tag="VLD58_00435"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB52784.1"
                     /translation="MASLTQDLRYAVRTLRKSPAFTTVAVLTLGLGIGANTAIFSVIN
                     AVLLRPLPFRDPERLVTVEHHYPSLNDLHASVSVPGFLTYESKKQIFEHAGVETGWAP
                     TLTGQGDAERLQASQVSADWFKTLGVTPGLGRAFLAEDATAGHEHVVVLSEPFWRARL
                     GGDPKMVGKSILLNGEQYQVIGVMPPGFRGALNRQAQLWAPYVPPPALVSGSPTNEFL
                     TFTGRLAAGVTPEQAQRELDQLAKQLKADNPSSYSPDWGLLLTTLTDRVTGSLRRALL
                     VLLGAVGLVLLIACANVANLQLARAASRSREVAVRVAMGASPAALVRQLLTESVLLAL
                     MGGVLAVLLAAWGVPALLALNASNLPPASDIGLDPTVLLFTLLISVVTGLVFGLAPAL
                     RVRHANLHETLKEGGRGAAGDLGGLALRRGLVVATVALALTLLVGAGLMVRSFARLVG
                     VDPGFDPDNLLTFNLALPATRYSNDTLRMAAFDRVNEALVGLPGVVGVGGTTTLPFGG
                     SWATGSFNVEGYQAPANTPGPWGDQRLVTTNFLPTLGVRLLKGRQFTDQDGPGAPGVV
                     IVDEEMVQRYWPHDDPIGKRITFNSLTDSSITWITVVGVVNHTMHEGLDGGRRVQLYY
                     PLRQAPRPFVAFAVRTRGAPMGLAPQVKAAIKAFDPDLAVSNLTPMSELIETSTGPRR
                     FSMVLLGIFSGLAAVLATIGLYGVMSFTVTQRSKELGVRLALGAVPQDVLRLVLTQGM
                     RLVLFGVGIGLVAALVLSRVLRTLLFNVSATDPLTFVLISFLLLVVTLLATWLPARRA
                     TRVDPVTVLRDE"
     gene            complement(3985..4695)
                     /locus_tag="VLD58_00440"
     CDS             complement(3985..4695)
                     /locus_tag="VLD58_00440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB52785.1"
                     /translation="MTTNGQSLIRLEGIKKVFLTDEVETHALSEVHLEIRRGEYVAIS
                     GPSGCGKTTLLSLLGLLDTPSGGQYWLDNKPVAQLSPSERARIRNREIGFIFQAFNLI
                     GDLTVYENVELPLTYRGMPAAERKQRVMAALEKVGMSHRVKHYPSQLSGGQQQRVAVA
                     RAVAGEPLILLADEPTGNLDSTNGEAVMELLQALHRAGATICMVTHDPRYAAHADRAI
                     HLFDGRVVEDKVAELHQA"
     gene            complement(4804..>6015)
                     /locus_tag="VLD58_00445"
     CDS             complement(4804..>6015)
                     /locus_tag="VLD58_00445"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HSB52786.1"
                     /translation="RRIIYIGVGVAALAVTTVGLARLKPAAPTVEAGTLWMDTVRMGP
                     MVREVRGPGTLVPEQIRWVSAVAAGRVEKKLVLPGARVTASTVLLELSNPDVQIQLLQ
                     AERQLTDAQAQLVNLKTTLETQKLNQEGVVANIRTEYRNALRQAASDSSLMAQDLISA
                     AQYASSRDKAEEYTARLAVEQQRLDIYTQNIQSQLDVQKAQVERMRAVAEFQRGLVNA
                     MTVRAGSDGVLQELPLEQGQWAISGATLAKVVQPERLKAVLRIPETQARDVTVGQPAS
                     IDTRNGIVNGHVIRMDPASQNGTVTVDVALDDKLPKGARPDLSVDGTIMLERLDNVLN
                     VGRPAYGQANSTVGIFRVIPGTNEAERVRVELGRNSVNTIEIVRGLNKGDVVILSDMS
                     RWDAVDRVKLK"
BASE COUNT          988 a         2100 c         2022 g          905 t
ORIGIN      
        1 ctctcgatca gctcacgata gaactgcggc accgacgcat cggcctcgtg acgtgagccg
       61 gtgagccaga tctcggccga cagcacccgg tccacatcga agccggcatc ggtgctcatc
      121 aggttcgcga aggtgcggcc cagcagcccc gccccggtga ggagcaccag cgagagggca
      181 atctccgcga ccaccagggt gtcccggagc cggccatgct ccttgccgcc ggtgttccgc
      241 cagccgccgt ccttgagcac ccgctgcgga tccacccggg cgacctgcca cgcggggagg
      301 agcccgaagg cgaccccggt caggagcgaa aggacgaagg caaaggcgag cgccctgccg
      361 tcgagctgga tcccgtcggt aagcggcaca tcgccgggga ggaattggag catgctctgc
      421 aggccccaca ccgcgatcac cacacccagc actccaccga gcagtgccag caccaggctc
      481 tcggtgagaa gctggcggac cagcgcaccc cgccccgcgc ccagcgccag gcgcatcgcc
      541 agttcacggg cccggccgat cccgcggctc agcaccaggc tcgccacgtt ggcgcaggcg
      601 atgagcagca cgaacatgat cgcgccgacc agcacccgga tcggccggct cacatccgac
      661 acgatcagct gccgataggg aagcagctcg agcttcacct cctcgggcag gttcgccttg
      721 aactcttccc ggaaggacgc gaccgtgccc gtgatccgcc cctgggcctg gctcagcgac
      781 agccccggct tgagccggcc gatcatctcg aggttctgcc cgctgccgat cgtccggccg
      841 acctgcgcca gcgtggtcca cgcctccacc gcgggcagcg accggaagtc ggccggcatc
      901 acgccgacaa ccgtgtgcgg cacgccatcg agggacaccg tcttccccac gatggcggga
      961 tcgccgccga aacgcctctg ccagaggccg tggctcagca ccaccgccgc cgcgccaccc
     1021 tcgacgtcct catccgccgc gaacccacgc ccgagcgacg gctgcacgcc cagcacctcg
     1081 aaataggact gggatacccg gagccccgcc gccctgaagg cttcgttgcc gttcgcgagg
     1141 ttgaacccga ccggggtcgt ggccgtgacc gccgagaaga tctcgccccg gtcccggagg
     1201 tactggaact ggcggtaggt cagcgacatc tcgccccgat accccggtgc gacttcggcg
     1261 agctgcacca accgctccgc ctcgggatac gagagggggc gcagcagtac gccgtagaag
     1321 acgctgaaga tcgcggtgtt ggccccgatg ccgagcgcca gggtcagcgc cgcgatcagg
     1381 gtgaacgcgg gcgtccgcct gaggctgcgc agggcatact tgagatcgcg ggtcattcgt
     1441 ggctccagtc gatcgtccgt ctactcgtcc cgcagcaccg ttaccgggtc cacccgggtg
     1501 gcgcggcggg cggggagcca ggtggcgagc agcgtcacca ccagcagcag gaacgagatc
     1561 agcacgaacg tgagcggatc cgtggcgctc acgttgaaca gcagggtccg gagcacccgg
     1621 ctcagcacca gcgcggcgac cagcccgatt cccaccccga agaggaccag ccgcatgccc
     1681 tgggtcagca ccagccgcag cacatcctgc ggcaccgctc ccagcgcaag ccgcactccc
     1741 agctccttgg agcgctgggt gacggtgaat gacatcaccc cgtagagccc gatggtcgcg
     1801 agcaccgccg ccagccccga gaaaatgccg agcagcacca tggagaagcg gcggggaccg
     1861 gtgctggtct cgatcagctc cgacatcggg gtgaggttgg acaccgcgag atcgggatcg
     1921 aacgccttga tcgcggcctt gacctggggt gccagtccca tgggcgcgcc ccgggtccgc
     1981 accgcaaagg ccacgaacgg ccgcggtgcc tgacgcaggg gatagtagag ttgcacccgt
     2041 cgcccgccgt cgagaccctc gtgcatcgtg tggttcacca cgccgaccac ggtgatccag
     2101 gtgatgctgg agtcggtgag gctgttgaag gtgatccgct tgccgatcgg gtcgtcgtga
     2161 ggccagtagc gctggaccat ctcctcgtcc acgatcacca cgcccggcgc gcccggcccg
     2221 tcctggtcgg tgaactgacg ccctttgagg agccgcactc cgagggtggg gaggaagttg
     2281 gtggtgacca accgctggtc accccacggc cccggggtgt tggccggggc ctggtagcct
     2341 tcgacgttga agctgccggt tgcccacgac ccgccaaatg gcagcgtggt cgtgccgccc
     2401 acgccgacga cccccggtag cccgaccagc gcctcgttga cccggtcgaa cgcggccatc
     2461 cggagcgtgt cgttgctgta cctggtggcg ggaagcgcga ggttgaacgt gagcaagttg
     2521 tcggggtcga accccggatc cactcccacc agccgggcaa agctccggac catgaggccg
     2581 gcgccaacca ggagcgtgag ggccagcgcc accgtcgcga ccaccagccc gcggcggagc
     2641 gccaggccgc cgagatcgcc ggccgcaccg cgcccgcctt ccttgagggt ctcgtgcaga
     2701 ttggcgtgcc gaacccggag cgccggcgcg agcccgaaga ccagcccggt tacgacgctg
     2761 atcaggaggg tgaacagcag caccgtcggg tcgagaccga tatcgcttgc cggcggcagg
     2821 ttgctggcgt tgagcgcgag cagcgcgggc acgccccacg cggccagcag caccgcgagc
     2881 acgccaccca tcagcgccag cagcacactc tcggtaagca gttgccgcac cagtgccgcc
     2941 ggcgaggccc ccatcgcgac ccggaccgcg acctcgcgtg accggctcgc cgcgcgggcc
     3001 agctggaggt tggcgacgtt ggcgcaggca atcagcagca ccagccccac cgcccccaga
     3061 agcaccagca gggcccggcg caggctcccc gtcacccgat cggtcagcgt ggtgaggagg
     3121 agtccccagt cgggggagta gctggagggg ttgtcggcct tgagctgttt ggcgagctgg
     3181 tccagctccc tctgcgcctg ttccggcgtc acaccagccg cgaggcgccc ggtgaacgtc
     3241 aggaactcat tggtcgggct cccgctcacc aaggcgggcg gcggaacgta gggtgcccag
     3301 agctgggcct ggcggttgag cgcgccgcgg aatccgggcg gcatcacgcc gatcacctgg
     3361 tactgctcgc cgttcagcag gatcgacttc cccaccatct tcggatcgcc gcccagccgg
     3421 gcccgccaga acggctcgct cagcaccacg acatgctcat gccccgcggt ggcatcctcg
     3481 gcgaggaacg cgcgtcccag gccgggagtc acgccgaggg tcttgaacca gtccgccgag
     3541 acctgcgagg cctgcagccg ttccgcgtcg ccctggccgg tgagggtcgg ggcccacccg
     3601 gtctccaccc cggcgtgctc gaagatctgt ttcttcgatt cgtaggtgag gaaccccgga
     3661 acggaaaccg aggcgtggag atcgttgaga ctgggatagt gatgctccac cgtgaccagc
     3721 cgctccggat cccggaacgg gaggggccgc agcagcactg cattgatcac ggagaagatc
     3781 gcggtgttgg cgccgatgcc gagtccgagg gtgagcaccg cgacggtggt gaaagcggga
     3841 ctcttgcgga gggtgcggac cgcgtatctc aggtcctgcg tgaggctcgc catggtgtgc
     3901 gcctcggagc ggtgggtaag ccgggggcct ggcccggttc gttcgaggac gaaccgggct
     3961 cagacaacct cgggaacttc ggaatcaggc ctggtggagt tcggcgacct tgtcttcgac
     4021 cacccggccg tcgaagagat gaatcgcgcg gtcggcgtgg gcggcgtacc ggggatcgtg
     4081 ggtgaccatg cagatcgtgg cgccggcccg gtgcagcgcc tggagcagtt ccatcaccgc
     4141 ttcgccgttg gtcgagtcga ggttaccggt cggctcgtcg gcgaggagga tgaggggttc
     4201 cccggccacg gcgcgggcca ccgccacgcg ctgctgctga ccgccggaga gctgcgaggg
     4261 gtagtgcttg acccggtggg acatccccac cttctcgagc gctgccatca cccgctgctt
     4321 ccgctcggcc gcgggcatgc cgcggtaggt gagcggcagc tcgacgttct cgtacacggt
     4381 gagatcgccg atcaggttga aggcctggaa gatgaacccg atctcgcggt tacggatccg
     4441 ggcccgctcc gagggcgaga gctgcgccac cggcttgttg tccagccagt actggccgcc
     4501 cgagggcgtg tcgagcaggc cgagcaggga gaggagcgtg gtcttgccgc agccggaggg
     4561 gccggagatc gcgacatact caccgcgacg gatctcgagg tgcacctcgc tcaacgcgtg
     4621 ggtttccact tcatccgtga ggaacacttt cttgatgccc tcgagacgaa tcagcgactg
     4681 gccgttggtg gtcatgcaat ctccggtgta aggcagtgga caccgccaat aatgtttgca
     4741 attcaacagc gagctgatga ctaacggcta acggctaacg gctaatggcc aacggccaac
     4801 ggcctacttg agcttcaccc ggtccacggc atcccagcgc gacatgtcgg acaggatgac
     4861 cacgtcgccc ttgttgaggc cgcgcacgat ctcgatcgta ttcaccgagt tgcggcccag
     4921 ttccacccgc acccgctccg cctcgttggt tcccggaatc acacggaaga tcccgaccgt
     4981 gctgttggcc tggccgtagg ccggccgccc cacgttgagc acgttgtcga gccgctccag
     5041 catgatcgtg ccgtccacgc tcaggtccgg ccgggcgccc ttcggcagct tgtcatcgag
     5101 ggccacgtcc acggtgaccg tcccgttctg cgaggccggg tccattcgaa tgacgtgccc
     5161 gttcacgatc ccgtttctgg tgtcgatcga ggccggctgg cccaccgtca cgtcccgggc
     5221 ctgggtctcc ggaatccgga gcacggcctt gagccgctcg ggctgcacca ctttcgcgag
     5281 ggtggcgccg ctgatggccc actggccctg ttcgagcggc agctcctgga gcacgccatc
     5341 ggagccggcc cggaccgtca tcgcattcac caggccgcgc tgaaactcgg ccaccgcccg
     5401 catccgctcc acctgcgcct tctggacgtc gagctggctc tggatgttct gggtatagat
     5461 gtcgaggcgc tgctgctcca cagccagtcg ggcggtgtat tcctccgcct tgtcccggct
     5521 gctggcgtac tgggcggccg agatcaggtc ctgggccata agggacgagt cggacgcggc
     5581 ctgacgaagc gcgttgcgat actccgtccg gatgttggcg accacgcctt cctggttgag
     5641 cttctgggtc tcgagggtgg tcttgaggtt gaccagctgc gcctgcgcgt cggtcaactg
     5701 acgctccgcc tggagcagct ggatctgcac gtcgggattg ctgagctcga gcaggaccgt
     5761 gctcgcggtc acccgcgcgc ccgggagcac cagcttcttt tccacccggc cagcggccac
     5821 tgccgagacc cagcggatct gctccggcac aagggtaccc gggcctcgga cctcgcggac
     5881 catcggcccc atccggaccg tatccatcca gagggtgccg gcctcgacgg tcggcgcggc
     5941 cggcttgagc cgggccagac ccaccgtggt caccgccagc gcggccacgc caacgcctat
     6001 atagatgatg cggcg
//
LOCUS       DATIFF010000031         1736 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1695894, whole genome shotgun sequence.
ACCESSION   DATIFF010000031 DATIFF010000000
VERSION     DATIFF010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1736
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1695894"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..500)
                     /locus_tag="VLD58_00450"
     CDS             complement(<1..500)
                     /locus_tag="VLD58_00450"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HSB52787.1"
                     /translation="MRTMVMGMVVVLAGSTVGITSAQAQGEGTGAEFAVGGGVSVPTG
                     DFDDAAKLGWHGTAAVSFVPQNVPVGFQIDGTFSRFGTEGGFDIDYQMIYGTGNVVYK
                     FKTSEDSRFRPYLIGGGGVYNFDVKGSDVALVGDPGSETKFGINAGAGFDFKAGSAGL
                     FIEGRF"
     gene            complement(606..761)
                     /locus_tag="VLD58_00455"
     CDS             complement(606..761)
                     /locus_tag="VLD58_00455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52788.1"
                     /translation="MTRLRLGLALAGFAVALLAVVADQPRLGWGAIALLVGSLIVRLV
                     QRRGGGV"
     gene            complement(758..1534)
                     /locus_tag="VLD58_00460"
     CDS             complement(758..1534)
                     /locus_tag="VLD58_00460"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HSB52789.1"
                     /translation="MAKWLKSPQTLLFEIRGHVAYITLNQPEKRNALSNAAMHELHDA
                     MMEADDHKQVRCVVLSGAGKDFCAGADLGELLESADRSLAENEAAARRLGELFIAIRR
                     IPKPVVAVVQGRALAGGAGLATACDLVVAGTGAQFGYPEIQRGFVPAMVMTILRRLAG
                     ERLALDLVLTGRTLGAEEARGVGLVSRVVPDADLDRESGALLQVLAAASATALGFTKR
                     LFHELDGASFEDGVALGARVNALVRQTPDFRQAIARFLER"
BASE COUNT          281 a          648 c          559 g          248 t
ORIGIN      
        1 tggaaccggc cctcgatgaa caatccggcg gacccggcct tgaagtcgaa gcccgcgccg
       61 gcgttgatgc cgaacttggt ttccgagccg ggatcgccga ccagggcgac gtcgcttccc
      121 ttgacgtcga agttgtagac cccgcccccg ccgatcaggt agggacggaa ccgggagtcc
      181 tccgaggtct tgaacttgta gaccacgttg ccggtcccgt agatcatctg gtagtcgatg
      241 tcgaacccgc cctcggtgcc gaagcggctg aaggtgccgt cgatctggaa gcccaccggc
      301 acgttctggg ggacgaacga gacggccgcc gtcccgtgcc agcccagctt ggccgcgtcg
      361 tcgaagtcgc cggtcgggac cgacaccccg ccgccgaccg cgaactcggc gccggtgcct
      421 tcgccctggg cctgagcgga ggtgatgccc acagtcgagc cggccagcac caccaccatc
      481 cccatcacca tcgtacgcat gcgatctctc cttggtcgtg cgccgttacg gcgccccact
      541 ccgagttggt tcctccgggc gacgggcaag gtagcggtgg cgcgacacgg cacatgtgac
      601 gaccgtcaca cccccccacc gcgccgctgg accagccgca cgatgagcga cccgaccagg
      661 agcgcgatgg ccccccatcc cagccgcggc tggtccgcca ccaccgccag cagggccacg
      721 gcgaagccgg cgagcgccag gcccagccgg agccgggtca tcgctccagg aaccgggcga
      781 tcgcctgccg gaaatcgggg gtctggcgca ccagggcatt gacccgggcc cccagcgcga
      841 cgccgtcctc gaacgaggcc ccgtcgagct cgtggaacag ccgcttggtg aacccgagcg
      901 cagtggcaga ggcagccgcg aggacctgga gcagcgcccc gctctcccga tcgaggtcgg
      961 cgtcgggcac cacccgggag accagcccca ccccgcgcgc ctcctcggcg ccgagcgtcc
     1021 ggccggtcag aaccaggtcg agggcgagcc gctcgccggc caggcggcgg aggatcgtca
     1081 tcaccatggc cggcacgaac ccccgctgga tctcgggata cccgaattgg gcgcccgtgc
     1141 ccgccaccac caggtcgcac gcggtggcga gccccgcccc gccggcgagc gcccgtccct
     1201 gcacgacggc cacgaccggc ttggggattc gccggatggc gatgaacagc tcgcccaggc
     1261 gccgggcggc cgcctcgttc tcggccaggc tccggtcggc gctctccagc agctccccca
     1321 ggtccgcgcc ggcgcagaag tccttgcccg cgcccgacag cacgacgcag cggacctgct
     1381 tgtggtcgtc ggcctccatc atcgcgtcgt ggagctcgtg catcgccgca ttgctcaggg
     1441 cgttgcgctt ctccggctgg ttgagcgtga tgtaggcgac gtgcccgcga atctcgaaca
     1501 gcagcgtctg cggcgatttc aaccacttgg ccatcgaact ctccccatga tcggtcgctt
     1561 cgccggcgcc gataaagatg ctctaagcaa tcgttagcac tggcattcac ttttgcaatc
     1621 tcgtagccac gccaaagccg agctagtttg cgcgtcgact cgggagagga tcatgacgga
     1681 tacacaagcc ctgtcgcccg cgccaagcgc ggccgacgca ttcgtcggcc aaatcc
//
LOCUS       DATIFF010000032         1479 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1388376, whole genome shotgun sequence.
ACCESSION   DATIFF010000032 DATIFF010000000
VERSION     DATIFF010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1479
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1388376"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1234)
                     /locus_tag="VLD58_00465"
     CDS             complement(<1..1234)
                     /locus_tag="VLD58_00465"
                     /inference="COORDINATES: protein motif:HMM:NF025843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HSB52790.1"
                     /translation="MPTRLSGQIEHITFTNQENGFTIAKVRVPGRRDLVTVVGNLLAP
                     TPGEMLDMQGEWALHPKFGEQFKVEQFTTQVPATVHGITKYLGSGLVKGLGPVTAGRI
                     VERFGKNTLDVIEQEIGRLAEVPGVGAKRIAMIARAWEAQRDIRDVMMFLQGHGVGPG
                     YAAKIFKQYGNRAVAVVRENPYRLATDVTGIGFATADRIAGNIGIPRHSPLRVEAGVL
                     FVLQQLAEEGHVYYPRSALTERCREVLSVEEGAVAQALDLLAAARRVVVEELRGGAGE
                     PPAGGDAVFLPTLHRCEVGVARRLRALQEVPRRLGPADAAQAVTWVQGQLGMAFSENQ
                     VGALRGAMAHKLMVITGGPGTGKTTIVNAILTIFSRQAARVLLAAPTGRAARRLSEAT
                     GHEAKTIHRLLEYSAQKGG"
     gene            complement(1237..>1479)
                     /locus_tag="VLD58_00470"
     CDS             complement(1237..>1479)
                     /locus_tag="VLD58_00470"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014082.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrmO family methyltransferase"
                     /protein_id="HSB52791.1"
                     /translation="RTLQVHPRNDPSNPLTGVFATHSPMRPNLIGLTRCRIMGIEGDR
                     ISIDAIDARDGSPVIDIKCFIPDAQPPTDVRLPKWV"
BASE COUNT          210 a          518 c          507 g          244 t
ORIGIN      
        1 agccgccttt ctgggcgctg tattcgagaa gccgatggat ggttttcgcc tcgtggccgg
       61 tggcctcgct cagccgccgg gccgcccgac ccgtgggtgc ggccagcagc acccgggccg
      121 cctggcggct gaagatcgtc aggatggcgt tgacgatcgt ggttttgccg gtccccggcc
      181 cgccggtgat gaccatcagc ttgtgcgcca tggcgccgcg cagcgccccc acttggtttt
      241 ccgaaaaggc catgcccagc tgaccctgga cccaggtaac ggcctgggcc gcatccgcgg
      301 gcccgagcct tcgcggcact tcctgcagcg ccctgagccg ccgggcgact ccgacctcgc
      361 accggtgaag cgtcggcaga aaaaccgcgt cgccgccggc cggcggttcg cccgcaccgc
      421 cccgaagctc ttccacgacc acacgccggg ccgcggcaag caggtccagc gcctgcgcca
      481 ccgcgccctc ctccaccgac aggacctcgc ggcagcgctc ggtcaaggcg ctgcgggggt
      541 aatagacatg gccctcctcg gccagctgct gaaggacgaa gagaaccccg gcctccaccc
      601 gcaaggggga gtggcgcggg atcccgatgt tcccggcgat ccggtccgcc gtggcaaagc
      661 cgatcccggt gacatccgtc gccagccggt aggggttctc ccggaccacg gccacggcgc
      721 ggttcccgta ctgtttgaag attttggcgg cgtaccccgg gccgaccccg tggccctgca
      781 ggaacatcat gacgtcgcgg atgtcgcgct gggcctccca ggccctggcg atcatggcga
      841 tgcgctttgc gccgaccccc ggcacctcgg ccaggcggcc gatctcctgc tcgatgacgt
      901 ccagcgtgtt tttgccgaag cgctccacga tacggccggc cgtgaccggc cccagcccct
      961 tgaccagccc ggagcccagg tatttcgtga tcccgtggac cgtcgccggc acctgggtgg
     1021 tgaactgctc gaccttgaac tgctccccga atttcgggtg gagggcccat tccccctgca
     1081 tgtccagcat ttcgccgggg gtgggcgcga gcaggttgcc gaccaccgtg acgagatccc
     1141 ggcggccggg gacgcgcacc ttggcgatgg tgaagccgtt ttcctggttg gtgaaggtga
     1201 tgtgctcgat ctggccgctg aggcgggtcg gcatgctcac acccatttcg gcaggcggac
     1261 gtcggtcggg ggctgcgcat cggggatgaa gcacttgatg tcgatcacgg gcgagccgtc
     1321 ccgcgcgtcg atggcatcga tcgaaatgcg gtccccctcg atccccatga tgcggcagcg
     1381 ggtgagcccg atgaggttgg gccgcatcgg ggagtgcgtc gcgaagaccc cggtcagcgg
     1441 gttggacggg tcattgcgcg ggtgcacctg cagcgtgcg
//
LOCUS       DATIFF010000033         1366 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1696132, whole genome shotgun sequence.
ACCESSION   DATIFF010000033 DATIFF010000000
VERSION     DATIFF010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1366
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1696132"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(339..1153)
                     /locus_tag="VLD58_00475"
     CDS             complement(join(339..823,823..1153))
                     /locus_tag="VLD58_00475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012948683.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HSB52792.1"
                     /translation="MVAPWIVDDGLWELIEPLLPSWPIRAPGPRPIDDRRCLQGILFV
                     LHTGIGWEDLPAELGFGSGMTCWRRLRRWTEAGVFEKLHRVLLAELHAAGAIDWSRAV
                     ADAAHLRAPKGGAGVGPSPVDRGRSGSKHHLICDGGGVPLRVITSGGNVNDVSPALDL
                     VDGIPPVAGRPGRPRRRPDALLADKGYDSNPLRHELARRRIVPIISSRGTKGVQGLGK
                     LRYVVEQTLALLHQFKRLAVRWERHLDLHEALVSLACALICRRRLKNQRPRSC"
BASE COUNT          218 a          483 c          470 g          195 t
ORIGIN      
        1 ctgctgccgc aggtgctggc ccgattgcgg gcgctgccct cgtcggcctg accggccttc
       61 tgccccaccg accaggagcc ggaacccgcg tcatccggct ttcgaccacg gctgccgtac
      121 gaggcggcca ccgatcacgg atcgaggacc ctggcgcatg ggactgagct ctttcccacc
      181 tgcgttgccg cagctcagca ggcatgcccc agggctgacc atcatcgtga tcatcagcat
      241 cacggcaggt catccaggtg caagtgtggt tggagacgga cccgcggtct gcgacgagtc
      301 gaccagcggc caggttggaa agggctcact aagagctcct aacacgatct tggtcgttgg
      361 ttcttgagcc ggcgtcggca gatgagggcg caggcgaggg agaccaaggc ctcgtgcagg
      421 tccaggtggc gttcccatcg gacggcaagg cgtttgaact ggtgaagtag ggcgagggtc
      481 tgctcgacga catagcgcag cttgcccagc ccctggactc ccttggtgcc gcgggaggag
      541 atgatcggga cgatgcggcg ccgggccagt tcgtggcgca gcgggttgct gtcgtagccc
      601 ttgtccgcga gcagggcgtc cgggcggcgg cggggccggc ccgggcggcc ggccactggc
      661 gggatcccat cgactagatc gagagccggg ctgacgtcgt tgacgttccc accgctggtg
      721 atgaccctca acggcacgcc accgccgtcg cagatcagat gatgcttcga gcccgagcgg
      781 ccacggtcga ccgggctcgg cccgaccccg gcgccccctt ttgcgcccgc aggtgcgccg
      841 cgtcggcgac cgcccgggac cagtcgatcg caccggcggc gtgcagctcc gcgagcagga
      901 cccggtgcag cttctcgaac accccggcct cagtccagcg gcgcaaccgc cgccagcagg
      961 tcatccccga cccgaatccc agctcggccg gcaggtcctc ccaaccgatc ccggtgtgca
     1021 gcacgaacag gatcccctgc agacaccgcc ggtcgtcgat cggccgcggc cccggcgctc
     1081 ggatcggcca tgacggcagc aacggctcga tcagctccca caacccatcg tcgacgatcc
     1141 acggcgctac cacgccggac ccaaccgcta acccgacgac cggtcacggc gaccagcaca
     1201 gactcaagat cgtgttagga gctctaagag cgatgcgggg gcgtgggggc cgttaccggg
     1261 ccgcgggggc ggggcggtag ggccaggcgt cgtcgcagac gaagccggcc tgtgccgggt
     1321 cgcgccgacg ccagcgctgg tatccggcgg cccacctggc atgccc
//
LOCUS       DATIFF010000034         9458 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1696165, whole genome shotgun sequence.
ACCESSION   DATIFF010000034 DATIFF010000000
VERSION     DATIFF010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9458
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1696165"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..598
                     /locus_tag="VLD58_00480"
     CDS             <1..598
                     /locus_tag="VLD58_00480"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HSB52793.1"
                     /translation="GSRIIGEELTPEIVTDGLVWVVDPLDGTTNFLHGFPAFAVSIAA
                     AIDGRLEAAVVLHVPLNRLTRAVRGGGTWEGGTRVTVSTLTDPAHALIGTGLPYRDFT
                     RIDEYLAQLGRVIQGATGVRRPGSAAIDLADVAAGRFEGFWEQRLSAWDIAAGTLLVR
                     EAGGLVTDYSGRDLGIEHSGVVAGSPAIHRWLLETIRG"
     gene            608..1225
                     /locus_tag="VLD58_00485"
     CDS             608..1225
                     /locus_tag="VLD58_00485"
                     /inference="COORDINATES: protein motif:HMM:NF016825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclodeaminase/cyclohydrolase family protein"
                     /protein_id="HSB52794.1"
                     /translation="MTSIEEFAERVASSEPVPAGGSVAAVTAGLAAALVEMIAKIAAA
                     KDKSGGTGLAQMVEQAHHLRERLLVLSDEDAKAYAAVLAARRDSTGGEAERDVRIRRA
                     WRHAAQVPADVVRLSREIAQLARRAAREGPPSTVGDAVMAALLAAAAAAGSHVNLRLN
                     MEAAGRPEDVRVLANDTEVLLRDTQRAASEVRLLAEERLTAKRQV"
     gene            1315..1647
                     /locus_tag="VLD58_00490"
     CDS             1315..1647
                     /locus_tag="VLD58_00490"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HSB52795.1"
                     /translation="MSRTPPELLQGTVDLLILRAVAGGPLHGYAISRWVEQRSDGVLA
                     VDGAALYQSLHRLEHRKLVAAAWGRSENNRRAKFYELTTAGRARLRADTMVWQRYADA
                     VATVLSPA"
     gene            1652..4315
                     /locus_tag="VLD58_00495"
     CDS             1652..4315
                     /locus_tag="VLD58_00495"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB52796.1"
                     /translation="MPLPRNFRFPRRSSADLATEVDDELAFHLEMRIGDLIKSGLDPA
                     EAERRARAEFGDLEGTRAYCLGLARKTERSARVGDLLEELRHDLAQAWRTVRRQPGFT
                     LVAVLTLALAIGANTAIYTVIRSVLLRPLPFGAPDELVLVTETDPTNPSARNPISALN
                     LLDYRARQRLLTGIAGSDSRSVTWRPDRGDPELLDALSVTPNTFALLQASPLLGRAFS
                     EEEDIPGGEPRVILSYGFWQAAFGGSADILGRTITLNDLPYRVLGIMPRGFSVVGDEA
                     MWTPLGFAREMANPAVSRRQHFVRTFARLKPGVTLEAAQADLARISRQLEVEYPDANT
                     GRVATLAPLSTALTRDVGPNLLLLQLASALVLLMACVNLANLTLARGMVRRRELALRA
                     ALGAGRNRLVIQLLAESLLLALLGGALGTGLAMLATRTLLALEPAAVPAFFSIHPDRT
                     VLLFALGISLLTGVLFGLVPALEAARPDLRQALQDGGRGSSDGTTSGRMRRSLVVAQV
                     ALAVVLLTGAGLLLRSFAELARVPLGFDPDRVMTAEVRVSGERYDPPPMVNGFYDRLL
                     DGIRSSPGVVAVGATMKLPGRGMVSSSLVVEGQPSDPTHLPDVGLILVRGDYFPALRV
                     PLIAGRWFAEEDRLGTPGVVLVNQTAARSFFPDGQAVGRRIRLGPDPNAAWSTVIGVV
                     GDMREKSLEDLPEPVVYSNHVQNTWWRSLTLVVRTKGDPIAVEPAIREALRAADPTLA
                     LRNVRSLDAVLGSILAARRLTLALVGGFAGVALLLAAVGLYGVLAFTVTSRRREFGVR
                     LALGADRRSVLLLVLRQGLGWAVLGFLVGLVGAVAGGQVMRGRLYGITPTDGYTYLMV
                     TLGLLSVAVIACLLPAARATRVDPVESLRAE"
     gene            complement(4485..5234)
                     /gene="map"
                     /locus_tag="VLD58_00500"
     CDS             complement(4485..5234)
                     /gene="map"
                     /locus_tag="VLD58_00500"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HSB52797.1"
                     /translation="MITIKSPREIETMARAGHIVAETLELMRRSVRPGISTLDLDNIA
                     EEFIRSHPGATPSFKGLYGFPKTLCTSINEEIVHGIPNARRVLRDGNIVSIDVGVHLE
                     GLHADGATTAPVGEVSPEATRLLEVTQECLRVGVAQARVGNHVGDIGHAVQQVAEAAG
                     FGVVRELVGHGIGTAFHEEPQVPNHGQPKRGPRLLEGMTIAIEPMITAGNHATRTLSD
                     KWTVVTADGSLSAHFEHTVAVLADGPRILTV"
     gene            complement(5320..5883)
                     /locus_tag="VLD58_00505"
     CDS             complement(5320..5883)
                     /locus_tag="VLD58_00505"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: protein motif:HMM:NF001381.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019205 - nucleobase-containing compound
                     kinase activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HSB52798.1"
                     /translation="MNILLLGPPGAGKGTQGALLAERLGLPKFATGDLLRDAVKRGTP
                     VGLKAKAVMESGQLVSDDIIMGVVRDELAKPEAAKGVIFDGVVRTVPQAEGVARLLGE
                     QKRQMDCVLFFDVPDQEILSRIEKRRGIEGRADDDPAAVATRLKAYREQTAPVLQWYR
                     ERGTVHMIQAVGKVDEIASRVQGLIGR"
     gene            complement(5991..7307)
                     /gene="secY"
                     /locus_tag="VLD58_00510"
     CDS             complement(5991..7307)
                     /gene="secY"
                     /locus_tag="VLD58_00510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HSB52799.1"
                     /translation="MTAAARPTLGGIDPELQKKIGFTLLALVIYRIGAHIFAPGVNVQ
                     AVTDFIRNSAAAGFFGLYDTLGGGLSRATIFALGIMPYISASIIFQLAGGIVPSVGKM
                     QKDEEGKKKLTQWTRYATVAISLTQAYAFAVFTESIPGAVPVATFWTRLSMMVVLTTG
                     AVFVMWLGEQITERGIGNGMSLLITFSILDRLWPGLVNMAGFWKSGVLTFPKVVLFGL
                     ILIGVVAAVTAMSLAARRIPVQIPRKVMGRGRMTQGQKTFIPIRLITAGVMPIVFAQT
                     IIIVPGTLASFTQNGALRAFADFFTPGELPYDLTFAVLILLFSYFYTSIIFNSVDLAE
                     NLKKQGGFIPGVKPGASTADYIDNVLARVTLPGALFLALIAIIPVTMTKQLGFQQQFG
                     GTSVLIVVGVLLDTIAQVQQHLTLRKYDSFMKTGRIKFRGRQQRFM"
     gene            complement(7304..7762)
                     /gene="rplO"
                     /locus_tag="VLD58_00515"
     CDS             complement(7304..7762)
                     /gene="rplO"
                     /locus_tag="VLD58_00515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HSB52800.1"
                     /translation="MADKMSPVTLSTLRPARGSNKAKMRVGRGPGSGKGKTSGRGHKG
                     HKARQAGETNPGFEGGQMPMYRRLPKRGFTNPFKVTAQPVNVKDLAGLQATEVNPDTL
                     FAAGLISKRDVPVKLLGTGDVARAYAVAGVKVSASARTKIEQAGGKIAAE"
     gene            complement(7763..7936)
                     /gene="rpmD"
                     /locus_tag="VLD58_00520"
     CDS             complement(7763..7936)
                     /gene="rpmD"
                     /locus_tag="VLD58_00520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HSB52801.1"
                     /translation="MKQIRSGIGHPETMRKTLKALGLKRHQSVSELPNNASVRGMLFK
                     VRHLVEVVPAQEK"
     gene            complement(8026..8511)
                     /gene="rpsE"
                     /locus_tag="VLD58_00525"
     CDS             complement(8026..8511)
                     /gene="rpsE"
                     /locus_tag="VLD58_00525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003328273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HSB52802.1"
                     /translation="MENVVAINRVAKVVKGGRRFSFNALVAVGDGKGRVGIATGKANE
                     VSEAVRKAVDAAKRKMVELPRVGATIPHEVIGQHGAGRVLLKPAASGTGVIAGGPVRS
                     VLECAGITDILTKSLGSNNPHNMVRATLDGLSQLVTARQVARERGIETDQIAYRAPQE
                     V"
     gene            complement(8689..9060)
                     /gene="rplR"
                     /locus_tag="VLD58_00530"
     CDS             complement(8689..9060)
                     /gene="rplR"
                     /locus_tag="VLD58_00530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006784446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HSB52803.1"
                     /translation="MRAVKSPSGRHELRARRHLRVRKKVAGTAERPRMAVFRSLKHIY
                     VQLVDDDRGVCLLGISDGSEGVTVDGAGKIGKAKGVGKALAAKAKAAGISKVVFDRAG
                     YRYHGRVKAVADGARAGGLEF"
     gene            complement(9063..>9458)
                     /gene="rplF"
                     /locus_tag="VLD58_00535"
     CDS             complement(9063..>9458)
                     /gene="rplF"
                     /locus_tag="VLD58_00535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HSB52804.1"
                     /translation="TITVERPTDRPNHRALHGLTRSLIANMIVGVTDGYTKVLEIQGV
                     GYKAEAKPTGLQLALGFSHPVHYKAPTGIKFTVDNNTIVKIEGADKEMVGQVAAEIRN
                     LRKPEPYKGKGVRYQGEVVRRKAGKTGAK"
BASE COUNT         1368 a         3302 c         3179 g         1609 t
ORIGIN      
        1 gggatcgcgg atcatcgggg aggaactgac ccccgaaata gtcaccgatg gactggtctg
       61 ggtggtcgac ccactcgacg gcaccaccaa cttcctccac ggctttcccg ctttcgccgt
      121 ctccattgcg gcggcaatcg atgggcggct ggaggccgcg gtggtgctcc acgtcccgct
      181 caaccgactg acccgcgcgg tacgaggcgg cggcacctgg gaaggcggca cccgggtgac
      241 cgtctcgacc ctcaccgacc ccgctcacgc cctgatcggc accggcctcc cctaccggga
      301 tttcacccgc atcgacgagt atctcgccca gctcggccgc gtcattcagg gtgcgaccgg
      361 tgtgcggcgt cccggctccg ccgcgatcga cctcgccgac gtcgccgccg gacggttcga
      421 gggattctgg gaacagcgcc tctcggcctg ggacatcgcc gcgggtaccc tgctcgtacg
      481 tgaagccggc gggctcgtca ccgactacag cggccgcgac ctcggcatcg aacacagcgg
      541 cgtggtcgca gggagcccgg ccatccaccg ctggctcctc gaaaccatcc gcgggtaacg
      601 ggacctcatg acatcgatcg aagagtttgc ggagcgggtg gcctcctccg agccggtacc
      661 ggcggggggc tccgtcgctg cagtcacggc cggcctggcc gctgccctgg tggaaatgat
      721 cgcgaagatc gctgccgcca aggacaagtc gggcggcacg gggctggctc agatggtgga
      781 gcaggcgcat catctccggg agcgcctgct ggtcctgagc gacgaagatg ccaaggcgta
      841 tgccgcggtg ctggcggctc gacgcgattc caccggcggg gaagccgagc gggacgtcag
      901 gatccgccgg gcgtggcgcc atgccgcgca ggtccccgcg gatgtggtgc ggctgagtcg
      961 ggagatcgcc cagctggccc ggcgcgcggc cagggaagga cccccgagca ccgtgggtga
     1021 cgcggtcatg gcggcgctgc tggctgcggc agcggccgcc ggctcgcacg tcaatctccg
     1081 gctcaacatg gaggcggcgg gccggccgga ggatgtgcgg gtcctggcga acgataccga
     1141 ggtgctgctg cgcgacaccc agcgcgccgc gtcggaagtg cgcctgctgg cggaagaacg
     1201 cctgaccgcc aagcggcagg tctgagggca ccccgccccc acacgcattc ccgccgggct
     1261 tgcagagtct gggctcgact cctaccttcc actcacctga tgagtggaga agccatgagc
     1321 cggaccccgc ccgagctgct gcaaggcacc gtcgatcttc tcattctccg cgccgtcgcc
     1381 ggcgggccgc tccacggcta tgccatttcc cgctgggtcg aacagcggag cgatggggtc
     1441 ctcgcggtgg atggtgcggc gctctatcag tcactccacc ggctggagca ccgcaagttg
     1501 gtcgccgcgg cctggggccg gtcggagaac aaccgccgcg cgaagttcta cgagctcacc
     1561 acggcgggtc gggcccggct ccgggccgat acgatggtgt ggcagcgcta tgccgatgcg
     1621 gtagccaccg tcctgagccc ggcctgaccc aatgccactg ccccgcaact tccgcttccc
     1681 tcggcgttcc agcgccgacc tcgccaccga ggtggacgac gagctggcgt tccacctgga
     1741 gatgcgaatc ggcgacctga tcaaatcggg cctcgatccg gccgaggcgg agaggcgggc
     1801 gcgggccgag ttcggagatc tggagggcac ccgggcctac tgtctggggt tggcgcggaa
     1861 gaccgagcgg tccgcccgcg tgggggatct gctcgaggaa ttgcgccacg acctggcgca
     1921 ggcctggagg acggtacgcc gccagccggg gttcacgctg gtcgcggttc tcacgctggc
     1981 gctggcgatc ggcgcgaaca ccgccatcta taccgtcatc cggtcggtgc tgctccggcc
     2041 cctgcccttc ggcgcccccg atgaactggt gctggtgacc gaaaccgacc cgaccaatcc
     2101 cagcgcccgg aatcccatct cggcgctcaa cctgctcgac taccgggccc gccagcgcct
     2161 cctgaccggc atcgccggat ccgacagccg ctccgtcacc tggcgcccgg accggggcga
     2221 tcctgagctg ctggacgcgc tctcggttac tcccaacacc ttcgcgctgc tccaggcctc
     2281 gccgctgctc gggcgcgcct tcagcgaaga ggaagacatc cccggcggcg agccccgcgt
     2341 catcctctcg tatggcttct ggcaagcggc gttcggaggg agcgcggata tcctgggccg
     2401 gaccatcacg ctgaatgacc tgccgtatcg tgtgctcggg atcatgccac ggggcttctc
     2461 tgtggtgggc gacgaggcga tgtggacccc gctcggtttc gcgcgagaaa tggccaatcc
     2521 ggcggtcagc cgccggcagc acttcgtccg cacgtttgcg cggctcaagc ccggcgtgac
     2581 cctggaagcc gcccaggccg acctcgcccg gatctcccgc cagctcgagg tggagtaccc
     2641 cgatgcgaat accggccggg tggcgactct ggctccactc agcacggcac tcacccgcga
     2701 tgtgggcccg aatctcctgc tcctgcagct ggcgagtgcc cttgttctcc tcatggcgtg
     2761 cgtgaacctc gccaatctga ctctcgcgcg cgggatggtt cgccgacggg agcttgccct
     2821 ccgcgccgcg ctgggagccg ggcgcaatcg gctggtgatt cagctcctgg ccgaatcgct
     2881 gctccttgcc ctgctgggcg gggcactcgg caccggtctc gcgatgctgg ccacgcggac
     2941 cctgctggcg ctcgagccgg cggcggtgcc cgccttcttc agcattcacc ccgatcgcac
     3001 cgtcctgctc ttcgccctcg ggatctcgct cttgaccggc gtgctcttcg gtctggtgcc
     3061 cgccctcgag gcggcccgtc ctgaccttcg ccaggcgctc caggacggag gccggggaag
     3121 cagtgacggg actacgagtg gccggatgcg ccgtagcctc gtggtagccc aggtggctct
     3181 ggccgtcgtg ctgctgaccg gcgcgggact cctgctccgg agctttgccg aactggcccg
     3241 ggtcccgctg ggcttcgatc cggaccgggt gatgacggcc gaggtccggg tgagcggtga
     3301 acgatacgat cccccgccga tggtaaatgg gttctacgat cggctcctcg acggaatccg
     3361 gtcgtcgccc ggcgtggtcg ccgtgggggc taccatgaag ctgccgggcc ggggcatggt
     3421 gagcagttcg ctcgtggtcg aaggccagcc atcggatccc acccatctcc ccgatgtcgg
     3481 gctgatcctg gtacggggcg actacttccc ggcgctgcgg gtaccgctca tcgcaggacg
     3541 ctggttcgcc gaggaagaca ggctgggaac gccgggcgtc gtcctggtga accagaccgc
     3601 cgcgcgctcg ttctttccgg acggccaggc ggtcgggcgc aggatccgcc tggggcccga
     3661 tccgaacgcc gcctggtcca ctgtgatcgg ggtggtgggg gacatgcggg agaagagtct
     3721 ggaggatctc ccggagccag tggtgtattc gaatcacgtc cagaacacct ggtggcgctc
     3781 gctcacgctg gtggtgcgga cgaagggcga tccgatcgcg gtcgaaccag cgatccgtga
     3841 ggcgctgcgg gccgccgacc ccacactggc tctccgcaat gtgcgctcgc tggatgcggt
     3901 gctcggctcc attctggcgg cccggcgctt gaccctcgcc ctggtgggag gtttcgccgg
     3961 cgtggcgttg ctactggctg cggtggggct ctacggcgtg ctcgccttca ccgtcaccag
     4021 ccggaggcgg gaattcgggg tgcggctcgc actgggggcc gatcggcgga gcgtgctgct
     4081 cctggtgctt cgtcagggcc tgggctgggc tgtgctgggc tttctggtgg gactcgtcgg
     4141 ggcagtggcg ggtggccagg tcatgcgggg gcgcctctac ggcataaccc cgaccgacgg
     4201 gtacacctac ctgatggtca cgctggggct actgtctgtg gccgtgatcg cgtgcctgct
     4261 cccggcggcg cgggccaccc gggtggatcc ggtggagagt ctgcgggcgg agtgagaggg
     4321 ctgagggctt agggcttagg gcttagggct tggtggaagg tacgcttgag gctgacgggg
     4381 tcggggagga gcaacccgtg cgccgctcgg cagtctttcc gatcccttgc ggccacgagg
     4441 ccgcgacgtc cccggccccg tcagcctcac cctgccccgt ccagctagac cgtcaggatc
     4501 ctcggcccat ccgcgaggac cgccacggtg tgctcgaagt gcgccgacag actcccatcc
     4561 gcggtcacta cggtccactt gtccgacaac gtccgggtgg catggttccc ggcggtgatc
     4621 atcggctcga tcgcgatcgt cattccctcg agcagccgcg gcccgcgctt cggctgcccg
     4681 tggttcggca cctgcggctc ctcgtggaac gccgtcccga tcccgtggcc caccagctcc
     4741 cgcaccacgc cgaagcccgc cgcctccgcc acctgctgca ccgcatgccc gatgtccccc
     4801 acgtgattgc caaccctggc ctgcgccaca ccgacccgga ggcactcctg ggtcacctcc
     4861 aggaggcggg tggcctcggg gctcacctcg cccaccggcg ccgtcgtggc accgtcggcg
     4921 tggagcccct cgagatgcac ccccacgtcg atgctcacga tgttgccatc gcggagcacc
     4981 cggcgggcat tggggatccc gtggacgatc tcttcgttga tcgaggtaca gagggtcttg
     5041 gggaagccgt agagaccctt gaacgagggc gtggcccccg ggtgactgcg tatgaactcc
     5101 tcggcgatgt tgtcgaggtc cagcgtgctg atccccggcc ggaccgagcg gcgcatcagc
     5161 tcgagggtct cggcgacaat atgcccggcg cgggccatcg tctcgatttc gcggggagac
     5221 ttgatggtga tcatagagcc gttagccgtt agccaactcg gcgttgggcg agagcgggcg
     5281 cagggtgcgg acttcgcata ggctgaagaa agctaacggc taacggccta tcagcccctg
     5341 cacccgggag gcgatctcgt ccaccttgcc cacggcctgg atcatgtgca cggtcccgcg
     5401 ctcccggtac cactgcagta ccggtgcggt ctgttcccgg taggccttga gacgggtcgc
     5461 gaccgcggca ggatcgtcgt cggcccggcc ctcgatgcca cggcgcttct cgatgcggga
     5521 caggatctcc tggtccggca cgtcgaagaa gagcacacag tccatctgcc gcttctgctc
     5581 gcccaggagc cgcgccaccc cttcggcctg cggcaccgtg cgcaccactc cgtcgaagat
     5641 cacgcccttg gcggcttcgg gctttgccag ttcgtcccgc accacgccca tgatgatgtc
     5701 gtcgctcacc agttgccccg actccatcac cgccttggcc ttgagcccca ccggggtgcc
     5761 ccgcttcacc gcgtcgcgca gcaggtcgcc ggtcgcgaac ttggggaggc ccagccgttc
     5821 ggccagcagc gcgccctgag tgcccttgcc ggcgcccggc ggaccgagga ggaggatgtt
     5881 catgggaata gccagccttt catgaccgta ctgaagtgag aagtgagaag taagaaggcc
     5941 ggcggtgggc ccttctcact tctcacttct gacttctgac cgccgtggaa tcacatgaac
     6001 ctttgctgcc gcccccggaa cttgatccgt ccggtcttca tgaagctgtc gtacttccgg
     6061 agcgtcaggt gctgctgcac ctgcgcgatc gtgtcgagga gcacgcccac cacgatcagg
     6121 acagaggtcc cgccgaactg ctgctggaag ccgagctgct tggtcatcgt gaccgggatg
     6181 atcgcgatca gggccaggaa gagcgccccc ggcagcgtca cccgcgccag cacgttgtca
     6241 atgtaatcgg ccgtgctcgc gcccggcttc acgcctggaa tgaacccgcc ctgcttcttc
     6301 aggttctccg ccagatccac cgaattgaag atgatggagg tgtagaagta gctgaacagg
     6361 aggatcagga cggcgaacgt caggtcgtaa ggcagctcgc cgggggtgaa gaagtcggcg
     6421 aaagcgcgga gcgccccgtt ctgggtgaag ctcgccaggg tgcccgggac gatgatgatc
     6481 gtctgggcga acacgatcgg catcacgccg gcggtgatga gccggatggg gatgaaggtc
     6541 ttctgcccct gggtcatccg cccccgcccc atcaccttgc gcgggatctg gaccgggatt
     6601 cgccgggccg ccagcgacat cgcggtgacc gcggcgacta caccgatcag gatcaggccg
     6661 aacaggacga ccttcgggaa ggtgagcaca cccgacttcc agaagcccgc catgttcacg
     6721 agcccgggcc agagccggtc caggatcgag aacgtgatga gcaggctcat cccgttgccg
     6781 atgccccgct cggtgatctg ctcacccagc cacatcacga agacggcgcc ggtggtgagc
     6841 accaccatca tcgagagccg ggtccagaag gtggcgacgg gcaccgcccc gggaatgctc
     6901 tcggtgaaca cggcgaaggc gtacgcctgg gtcaaggaga tggcgaccgt ggcgtagcgg
     6961 gtccactggg tcagcttctt cttgccctct tcgtccttct gcatcttgcc gaccgacggc
     7021 acgatgccgc ccgccagctg gaagatgatc gaggccgaga tgtagggcat gatcccgagc
     7081 gcgaagatcg tcgcccggga gagaccgcca cccagggtgt cgtacaggcc gaagaacccg
     7141 gccgcggccg agttccggat gaaatccgtc acggcctgca cgttgacgcc gggcgcaaag
     7201 atgtgcgccc cgatccggta gatgaccagg gcgaggaggg tgaacccgat cttcttctga
     7261 agctcgggat cgatcccgcc gagtgtgggc cgggccgcgg cggtcattcg gccgcgatct
     7321 tcccgccggc ctgctcgatc ttcgtgcgcg ccgaggcgga gaccttcacg ccggcgacgg
     7381 cgtaggcccg cgccacgtct ccggtcccca gcagcttgac ggggacatcg cgcttggaga
     7441 tcaggccagc ggcgaacagg gtatcgggat tgacctcggt ggcctggagg cccgcgagat
     7501 ccttcacgtt gaccggctgg gcggtcacct tgaacggatt ggtgaagccg cgcttcggga
     7561 gccgccggta catcggcatc tgcccgcctt cgaagccggg attggtctca cccgcctgcc
     7621 gcgccttgtg acccttgtgg ccgcggcccg aggtcttgcc cttgccgctg ccggggccgc
     7681 gacccacccg catcttggcc ttgttcgagc cccgcgccgg gcgcagggtc gagagcgtca
     7741 ccgggctcat cttgtccgcc atttacttct cctgggccgg caccacctcg acgaggtggc
     7801 gcaccttgaa cagcatcccc cgcaccgacg cattgttcgg cagctcggac accgactggt
     7861 ggcgcttgag gcccagcgcc ttgagcgtct tccgcatggt ctcggggtgg ccgatcccgg
     7921 aacggatctg cttcacccag atcttcttgg cctgcgactc ggcgggcacc ttggccgcat
     7981 gatacttggg gccctgccgg ccgacgacgg gattacgtcc catgattaca cctcctgcgg
     8041 ggcgcggtac gcgatctgat cggtctcgat cccgcgctca cgcgccacct ggcgggcagt
     8101 caccagctgc gacagcccgt cgagcgtggc ccgcaccatg ttgtgcggat tgttgctgcc
     8161 caggctcttg gtcaggatat cggtgatgcc ggcgcactcg agcaccgacc gcaccgggcc
     8221 gccggcgatg acgccggtac cgctcgcggc cggcttgagc agcacccggc cggcgccgtg
     8281 ctggccgatc acctcgtgcg ggatcgtggc gcccacccgg ggcagctcca ccatcttccg
     8341 cttggcggca tcgaccgcct tgcgcaccgc ttccgagact tcgttggcct tgccggtcgc
     8401 gatgccgacc cgacccttgc cgtcgccgac cgccaccagg gcattgaacg agaaccggcg
     8461 gccgcccttc accaccttgg ccacccggtt gatggcgacc acgttctcga tgaactcgct
     8521 cttctcgcgc tcgcggtccc ggtcgccccg gccgccccgg ccgccgccct gtccgccccg
     8581 cccgcggccg ccaccctgtc cgccacgtcc gccccggcca cgcccgcccc gatcgccacc
     8641 agtagtggcg ggagcctcgg tggtggtgcc ttcctgttcg tcagccattt agaactccag
     8701 tccgcctgcg cgtgcgccgt cggccaccgc cttgacgcgt ccatgatacc ggtagcccgc
     8761 ccggtcgaac accaccttgg agatgccggc cgccttggcc ttggccgcga gcgccttgcc
     8821 gacgcccttc gccttgccga tcttgccggc gccgtcgacg gtcacgccct cggacccgtc
     8881 gctgatgccg aggaggcaga cgccccgatc gtcatcgacc agctggacgt agatgtgctt
     8941 cagcgagcgg aacaccgcca tccgcggccg ctccgccgtg cccgcgacct tcttgcgcac
     9001 ccggagatgc cgacgggcac ggagctcatg ccgcccggac ggcgacttga ctgcacgcat
     9061 ggttacttgg ctcctgtctt gccggccttg cggcggacca cttcaccctg atagcggacg
     9121 cccttgccct tgtacggttc gggcttgcgc aggttgcgga tctccgcagc cacctgcccg
     9181 accatttcct tgtccgcgcc ttcgatcttc acgatggtgt tgttgtccac cgtgaacttg
     9241 atccccgtcg gcgccttgta gtgcaccgga tgggagaagc cgagggcgag ctgcagcccg
     9301 gtcggcttgg cctcggcctt gtagccgacg ccctggatct cgaggacctt ggtgtagccg
     9361 tcggtgactc cgacgatcat gttggcgatc aggctgcggg tcagtccgtg aagggcgcga
     9421 tggttggggc ggtcagtcgg ccgctccacc gtgatcgt
//
LOCUS       DATIFF010000035         3786 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_465493, whole genome shotgun sequence.
ACCESSION   DATIFF010000035 DATIFF010000000
VERSION     DATIFF010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3786
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_465493"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..389
                     /locus_tag="VLD58_00540"
     CDS             <1..389
                     /locus_tag="VLD58_00540"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52805.1"
                     /translation="AFIAPEQAMGGGPVDGRADIYATGCVAYWLLTGQFVFTAETPMG
                     LLLQHVQSPPTPPSARTNQPIPPALDDLVLRCLAKNPADRPQSARELSRRLAELEGAD
                     AWTQDRAREWWVQHSGGDIPAVRARP"
     gene            complement(373..774)
                     /locus_tag="VLD58_00545"
     CDS             complement(373..774)
                     /locus_tag="VLD58_00545"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HSB52806.1"
                     /translation="MYRLPTAILPLSLCLAAACGSSSPTGPGQSPEPGDVTIVRGASL
                     LTTTAFDPNPEVLSLAAGARVRWVNGDGGTGYGGGVPVTHQIASDDGAFPTSGPLGVG
                     ETYAVTLTKTGTYRYHCAIHPTMVGTITVEP"
     gene            942..1499
                     /locus_tag="VLD58_00550"
     CDS             942..1499
                     /locus_tag="VLD58_00550"
                     /inference="COORDINATES: protein motif:HMM:NF019241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1572 family protein"
                     /protein_id="HSB52807.1"
                     /translation="MNHIIASLRAEYLRYKGLAEAAIGQLSEAELTAAGTGDGNSVAV
                     ICWHVAGNLRSRFTDFLTTDGEKPWRKRDEEFRHRIVTHAELLEHWERGWAALLGTLN
                     VLTDADLEREVTIRGQPLRVSEALHRSLAHASYHVGQVVYAARGLRGSTWRFLSIPPG
                     QSEQYNARPILEKPAAHLGSLRPQR"
     gene            complement(1531..2055)
                     /locus_tag="VLD58_00555"
     CDS             complement(1531..2055)
                     /locus_tag="VLD58_00555"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HSB52808.1"
                     /translation="MAPMNELDRFRKVWEMEAGLTSSLLESLPTDQYDFRPDPGGRSL
                     GEMAWHLAEIEGYISYGITRGAVTFQEAPPNLKRPREVSQLAPGYRRVHEEAVARLGS
                     LAEADFDRELPFAGRQLPIRDMLWGAILMHLIHHRGQLSLLSRLAGGTPPGIYGPNRE
                     EMAAMRERMQAAKV"
     gene            complement(2210..2971)
                     /locus_tag="VLD58_00560"
     CDS             complement(2210..2971)
                     /locus_tag="VLD58_00560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52809.1"
                     /translation="MYARVTCLLAVAAGAVFLAGCSDSTGASNDPQVRFNLATGAATP
                     AVASSASLAVAGAPVTYTDGAGNTLVIDQVELVLREIELERVGETACAVPASDSCEEL
                     EIGPILLDLPLTPGAEGQFTVPADTGSYGKVQFEIHKASPSDDAAFVAAHPEFADRSI
                     RVTGSYNGTAFTYLSDLDVEQELELSPPLVVGEGGSADLTLFVDVNTWFRSGAGDLID
                     PATANKGETNEGVVKDNIQNAFNAFEDGDRDGAED"
     regulatory      complement(3035..3109)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01051"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-GMP riboswitch class I; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="cyclic di-GMP"
                     /db_xref="RFAM:RF01051"
     gene            complement(3363..>3786)
                     /locus_tag="VLD58_00565"
     CDS             complement(3363..>3786)
                     /locus_tag="VLD58_00565"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HSB52810.1"
                     /translation="SPYLAENIRAYAGKPDSIKVDTIFGVPQVRRFAQYYFKETMNGF
                     LYGNLPMPTVRVGERTRWYVMASTNFEMHAPHWHGNTVELNHMRTDVAGLLPMGMQVA
                     DMVPDNPGVWLFHCHVGNHLMMGMQGRYEVKPVAVAVK"
BASE COUNT          558 a         1326 c         1308 g          594 t
ORIGIN      
        1 cggcgttcat cgcccccgag caggccatgg gcggtggtcc ggtggacggg cgcgccgaca
       61 tctacgctac cggctgcgtg gcctactggc tcctgaccgg gcagttcgtc ttcaccgccg
      121 agacgcccat ggggctgctc ctgcagcacg tccagtcgcc tccgactccg ccctccgccc
      181 ggacgaacca gccgattccc ccggcgctcg acgacctcgt gctgcgctgc ctggccaaga
      241 accccgcgga tcggccgcag tccgcccggg agctgtcgcg ccggctggcc gagctcgagg
      301 gagcggacgc ctggacccag gaccgggcgc gagagtggtg ggtgcagcac tcgggcggag
      361 acatccctgc cgtcagggct cgaccgtgat ggtgccgacc atcgtgggat ggatggcgca
      421 gtgataccgg taggtccccg tcttcgtcag cgtgaccgcg tacgtctccc ccacgcccag
      481 gggtccagag gtggggaagg cgccgtcgtc cgacgcaatc tggtgggtga ccggcactcc
      541 gcctccgtac ccggtgccgc cgtccccgtt gacccaccgg accctggccc cggcggcgag
      601 gctcagcacc tcggggttcg ggtcgaacgc ggtggtcgtc agcagggacg cgccccgcac
      661 gatggtgacg tcgcccggct cgggcgactg gcccgggccg gtagggctcg acgatccgca
      721 cgcggcggcc aggcagaggc tcagggggag aatggcggtc ggcagtcggt acatggtgcg
      781 agctcctcgc tcggaagaaa gagtgcctgc tctcactctg gaccgccgcc ggcccccgga
      841 tattcccggg aagggaataa attcggggag tcgcgattct ctcgctctgg tgggaaggtc
      901 cctccggaca tcgagtcgca ccgccacacc ggggttccat catgaatcac atcatcgcgt
      961 cgctgcgggc ggagtacctc cgatacaagg ggctggccga ggccgccatc ggccagctca
     1021 gcgaagccga gctgacggcc gccggtaccg gcgacggcaa ctcggtcgcc gtcatctgct
     1081 ggcacgtggc cgggaatctc cgctcccgct tcaccgactt cctgacgacc gacggggaga
     1141 agccctggcg caagcgggac gaagagttcc ggcaccgcat cgtgacccat gccgagctgt
     1201 tggaacactg ggagcgcggg tgggcggccc tgctggggac gttgaacgtc ctgacggatg
     1261 ccgatctcga gcgggaggtc accattcgcg gtcagccgct gcgggtgtcc gaggcgctcc
     1321 accggtcgct ggcccacgcg agctatcacg tcgggcaggt ggtatatgcg gcgcgcgggc
     1381 tccgcgggag cacctggcgc ttcttgagca tccctcccgg gcaatcggag cagtacaacg
     1441 cccggccgat cctggagaag ccggccgccc acctggggag cctgcgcccg cagcggtaag
     1501 accaggtcgc gccgcggggg tcgcgctgac ctacaccttg gccgcctgca tcctctcccg
     1561 catcgccgcc atctcctccc ggttcggtcc gtagatcccc ggcggcgtgc cgcctgccag
     1621 ccgggacagg agcgagagct gcccccggtg gtggatcagg tgcatcagga tcgcgcccca
     1681 tagcatgtcc cgaatcggca gctgccggcc ggcgaacggc agctcccggt cgaagtcggc
     1741 ctcggcgaga ctcccgagcc gcgccaccgc ctcctcgtgc acccggcggt accccggcgc
     1801 cagctggctc acttcccggg gccgcttgag gttcggcggc gcctcctgga acgtcaccgc
     1861 gccccgggtg atgccgtagc tgatgtagcc ctcgatttcg gccaggtgcc atgccatctc
     1921 gccgagcgag cggccgccgg gatcggggcg gaagtcgtat tggtcggtcg gaagggattc
     1981 gagcaggctg ctggtgagcc cggcttccat ctcccacacc ttgcggaagc ggtccagctc
     2041 gttcatcggg gccatgggtc ctcctggcgg gtgctgacgg ggattttcca ggaccccatt
     2101 gtgcagcacg ggcccggcgg gcgcaaccga cgcggggaag ccccgccggc ggaaacgacg
     2161 atggccggcg gtcgcccgcc ggccatcccc gtcggtcccg gcgatcggct cagtcttccg
     2221 cgccgtcgcg atcgccgtcc tcgaacgcgt tgaacgcgtt ctggatgttg tccttgacca
     2281 cgccctcgtt ggtctcgccc ttgttggcgg tcgccgggtc gatcaggtcg cccgccccgg
     2341 accggaacca ggtgttcacg tccacgaaca gggtgagatc ggccgatccc ccctcgccca
     2401 ccaccagcgg cggcgagagc tcgagctcct gctcgacatc gaggtcgctc aggtaggtga
     2461 acgcagtccc gttatagcta ccggtcaccc tgatgctccg gtcggcgaat tccgggtgcg
     2521 ccgccacgaa ggcggcgtcg tcgctgggcg aagccttgtg gatctcgaac tggaccttgc
     2581 cgtagctccc ggtgtcggcc ggcacggtga actggccctc ggcccccggg gtcagcggca
     2641 gatcgagcag gatcgggccg atctccagct cctcgcacga gtcgctcgcc ggcacggcgc
     2701 aggcggtctc gcccacccgc tccagttcga tctcccgcag caccagctcg acctggtcga
     2761 tcaccagggt gttgccggcg ccgtcggtgt aggtgaccgg cgcgcccgcc acggccagcg
     2821 aggccgagga ggccaccgcg ggagtcgcgg cgccggtcgc gaggttgaag cggacctggg
     2881 ggtcgttcga ggcgccggtc gagtcgctgc agccggcaag aaagacggcc ccggccgcga
     2941 cggccaggag acaggtgaca cgggcgtaca tgacagcctc cggagttggg gtgacgtgcg
     3001 caatccgcac attccttcgc tcccaaggca cttccccggc agccggacgg tctcggagag
     3061 actcctggct ttgcggcccc gcctcgcgac gggtgagcca tttcgggagc tggccgctca
     3121 cggccgaccc ccggaagagc agggggcgtg cccgatcgcc gccctgcgcg caagctcaac
     3181 gtggtcaacg ggatgaagcg agggcctctc ccgggtccga cccccccgct gcatcgatcc
     3241 gtggcagggg tggaacgaat cgttcaaggg gcgacgacgg aggaactgaa aggggaaggg
     3301 ggaaagggaa gggggcgctc gacgagatcg tcttgagcgc ccccttcgcc tttcccctac
     3361 ttctacttca ccgccacggc cacgggcttc acctcgtacc tcccctgcat ccccatcatc
     3421 aggtggttgc cgacgtggca gtggaacagc cacacgcccg ggttgtccgg taccatgtcg
     3481 gcgacctgca tgcccatcgg tagcagtccc gccacgtcgg tgcgcatgtg gttgagctcg
     3541 acggtgttgc cgtgccagtg cggggcgtgc atctcgaagt tggtcgaggc catgacgtac
     3601 caccgagtcc gctcgcccac ccgtaccgtc ggcatcggca ggttgccata gaggaacccg
     3661 ttcatggtct ccttgaagta atactgggcg aaccggcgga cctggggcac cccgaagatg
     3721 gtgtccacct tgatcgagtc cggcttgccg gcgtaggccc ggatgttctc cgccaggtac
     3781 gggctc
//
LOCUS       DATIFF010000036         1094 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2004086, whole genome shotgun sequence.
ACCESSION   DATIFF010000036 DATIFF010000000
VERSION     DATIFF010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2004086"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..570
                     /locus_tag="VLD58_00570"
     CDS             <1..570
                     /locus_tag="VLD58_00570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52811.1"
                     /translation="GSAVSTPDELDRELRQIGFAPRGSLGEEIRGRAARGDAPRRFPP
                     EPRIRLVVGGAAALLVISLAGWQAFRHRSVTVDHCCQDLDGGGSADDGVLIVSRAGVA
                     VEDLRIYEDLDRSGGYSPGDPVRFFRGSTPAVSGPVKGAETREFCCLDYDGGGPSDDA
                     LVVVGRAPDLITMAAIYERTAPGAQARLR"
     gene            690..>1094
                     /locus_tag="VLD58_00575"
     CDS             690..>1094
                     /locus_tag="VLD58_00575"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HSB52812.1"
                     /translation="MQRILLASTLLLAAVPLSAQQRDTTRRDTTVVELAPIEVVGSIL
                     PSAGPVVGSGVPARVTVLNRADIEASEPRLLTDLLVNQAGFSSYDDLGSAAKISLSSR
                     GFFASPVVGLPQGISVFLDGIRQNEPDAAQVNF"
BASE COUNT          155 a          377 c          373 g          189 t
ORIGIN      
        1 ggatcagccg tgagcacccc cgacgaactc gatcgcgagc tgcggcagat cggcttcgcg
       61 ccccgcgggt cgctcggcga ggagatccgc ggccgggccg cccggggcga cgcgccgcgc
      121 cggttccccc ccgaaccgcg cattcgtctc gttgtgggcg gcgctgccgc gctgctggtc
      181 atctcactgg ccgggtggca ggccttccgg catcggtcgg ttacggtgga ccactgctgc
      241 caggacctcg acggtggcgg cagcgcggac gacggagtcc tcatcgtgag ccgggcaggt
      301 gtggcggtcg aagaccttcg gatctacgag gacctcgacc ggagcggcgg ctactctccc
      361 ggcgacccgg tgcgtttttt ccggggtagc acgccggcgg tgagcggccc cgtcaaggga
      421 gcggagaccc gcgagttctg ctgcctcgac tacgatggtg gtggcccaag tgacgatgct
      481 ctggtggtgg tcgggcgggc gcccgacctc atcaccatgg ccgcgatcta cgagcgcacc
      541 gcgccgggcg cccaggcgag acttcgctag tactgttctt ccgagtgtca ccctgtcatc
      601 ccgagcgaag cgagggatcc ctgctgttga gaacagggat tcctcgccgc atgtgcggct
      661 cggaatgaca ccaattctcc ggaattcgaa tgcaacggat cctgctcgct tccaccctgc
      721 tgcttgccgc cgtcccactc agcgcccagc aacgggatac gacccgacgc gataccacgg
      781 tcgtggagct ggcgcccatc gaggtggtcg gttcgatcct gccgagcgca ggtccggtcg
      841 tggggtcggg agtgcccgcc cgcgtcacgg tgctcaaccg ggccgacatc gaagccagcg
      901 agccgcggct cctgaccgat ctgctggtga accaggcggg cttctcgagc tacgacgatc
      961 tcgggtccgc cgccaagatc tccctctctt cgcgcgggtt cttcgcttcg ccggtggtgg
     1021 ggctgccgca gggcatctcg gtttttctcg acggcatccg gcagaacgag cccgacgccg
     1081 cccaggtcaa cttc
//
LOCUS       DATIFF010000037         7829 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_927156, whole genome shotgun sequence.
ACCESSION   DATIFF010000037 DATIFF010000000
VERSION     DATIFF010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7829
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_927156"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..403)
                     /locus_tag="VLD58_00580"
     CDS             complement(<1..403)
                     /locus_tag="VLD58_00580"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSB52813.1"
                     /translation="MRYPSTRREIGWAAMALLALVALALLPLLLHRDDVLNFVFLILL
                     SITLAESWNIVAGYAGQVNLGHAAFFGLGALVARTLWIRGTPILLAMGAGAVVATAFA
                     LLIGVAAFRLRGAYFAIGTLALGEILRTTVGN"
     gene            complement(400..1269)
                     /locus_tag="VLD58_00585"
     CDS             complement(400..1269)
                     /locus_tag="VLD58_00585"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSB52814.1"
                     /translation="MSILAQQLVLGCLIGGLYGLAALGLSLVFGVLKILNVAHGDLIM
                     LGGYGAYWLFALLGLDPFVSLLLVLPLSLLLGLALYSALFGFVVRADEETRVKNSLLI
                     GFGLALTLHALAVRLWTADERSIDTPYGGAVISLGDLSIPVVRLLSLALAFALTGGLH
                     LMLKHWRWGQAIRATAEDWQGAVLTGIDVRRAYLLAFAIGTGLAGAAGTLVSVGYSIN
                     PSIGLEWTLKALIVVVLAGLGSTFGTFVGGLLLGLAEAGSAAAFGGPYREVVGLILFV
                     IVLVIRPRGLFGQ"
     gene            complement(1266..1997)
                     /locus_tag="VLD58_00590"
     CDS             complement(1266..1997)
                     /locus_tag="VLD58_00590"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB52815.1"
                     /translation="MLEISDLEVAYGDVRVLSGVTLSVRRDEIVALLGPNGAGKTTLL
                     KAIAGLLRPKAGTIRWQGEDLGRVPGHLIVERGLAMVPEGRRLFGSMTVEENLALGAF
                     AARARGTRQASLERVYALFPALRERRRHMVRVLSGGQQQMVAIGRALMTDPRLLILDE
                     PSLGLAPLLVRSILEVMGEINRNGVAVFLVEQNVHAALSLAHRAYILETGCIVGEGSG
                     AALLRDPHVRRAYLGPLAAPEYFAL"
     gene            complement(1990..2715)
                     /locus_tag="VLD58_00595"
     CDS             complement(1990..2715)
                     /locus_tag="VLD58_00595"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB52816.1"
                     /translation="MPLLQVERLTKSFGGIRALSGVSFAIEPGEVLGIMGPNGSGKTT
                     LFNLIAGALAPDAGSIRLRGEEIGGLSPHRICGKGIARTFQLVRPFPTLSVLDNVRVG
                     QLYGRAPEGTDARKLLALVGLDAKGRARAADLTLVERKRLELARALATSPDLLLLDEY
                     LGGLNPAETASAMALIRTLATQGMTVLMVEHIVWALMALSGRIIVLSASEKIAEGPPQ
                     AVAADPAVLDAYLGGDPGSWMRA"
     gene            complement(2721..3899)
                     /locus_tag="VLD58_00600"
     CDS             complement(2721..3899)
                     /locus_tag="VLD58_00600"
                     /inference="COORDINATES: protein motif:HMM:NF024825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HSB52817.1"
                     /translation="MSALIALAVLAAAGPVGVAAQTIKVGAVVPLTGRYGGGGAQVRA
                     GYELAIEHINAAGGVSVGGKKLPLELVVFDDESDATKTVSRLETLASQDVVAYLGGFA
                     SDLHAAAASVAEKNKIPYLGVAFALKKIHEQGFRYLFSPFWKSPDIAEQLVGFLGSLP
                     AAERVKTVAIFQEKTDWGAEMTRAWRDGGKAAGYQVVVQSEYAPGAKDFSDMILKAKS
                     ASADAVFAVPTPPDGMTMVKQMKELSYTPKMSLLIRAADPPVWSKNLGKDGDDVILAP
                     GWHHAVKAPGVKELNDAHQKKYGRPADPIVGPAYACVQILADALTRAGSLDREKVRAA
                     IAATDLTTVIGPVKFRPDGTGIIQSVLVQWINGKQELIWPKESATMPVVYPAPPFAKR
                     "
     gene            complement(3911..5038)
                     /locus_tag="VLD58_00605"
     CDS             complement(3911..5038)
                     /locus_tag="VLD58_00605"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HSB52818.1"
                     /translation="MTTYRSDVVGSLLRPGYLVEARQEAEGGRLDPAAFKRVEDRAVD
                     EAIALQEQAGLDIITDGEMRRYAFFGHLIEALDGFDKLGGWAIPFRNEQGEQLVFKRP
                     VVVERLRWRRSMCAEEFVYLRARARGPCKTTLISAQQAAAYYDPEKSRGAYPTRDAYL
                     ADVVDFTRREVAELVRLGCSYIQIDAPQYAALLDPSIREGYRQRGSDPDRLIDTCIEM
                     DNAVIGDHPGVTFGIHICRGNNQSMFYAEGGYEPIAERVFRRTRFRRFLLEYDDERSG
                     SFEPLRAVPDDRMVVLGLVTTKKMRLETVEELTRRIRAAAKVVPLDRLALSPQCGFAS
                     TLEGNRISPETQRRKLEVVAATARAVWGSRAHAEGQRREGS"
     gene            complement(5035..5514)
                     /gene="pcaC"
                     /locus_tag="VLD58_00610"
     CDS             complement(5035..5514)
                     /gene="pcaC"
                     /locus_tag="VLD58_00610"
                     /EC_number="4.1.1.44"
                     /inference="COORDINATES: protein motif:HMM:TIGR02425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047575 - 4-carboxymuconolactone
                     decarboxylase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-carboxymuconolactone decarboxylase"
                     /protein_id="HSB52819.1"
                     /translation="MDERQRAEAGMRVRREVLGDAHVDRSLARLNASNREFQDLITRY
                     AWGEIWTRPGLERRTRCLITLGMLVALNRSEEFRLHVRAALNNGLGRDDIREVLLQAA
                     ISCRIPAANAAFRMAEKVFATMDREPPPAEEIGPDGPRATSRHDQTLTDSAEPRGSP"
     gene            complement(5614..6945)
                     /locus_tag="VLD58_00615"
     CDS             complement(5614..6945)
                     /locus_tag="VLD58_00615"
                     /EC_number="5.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF006554.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047472 - 3-carboxy-cis,cis-muconate
                     cycloisomerase activity [Evidence IEA];
                     GO_process: GO:0019619 - 3,4-dihydroxybenzoate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-carboxy-cis,cis-muconate cycloisomerase"
                     /protein_id="HSB52820.1"
                     /translation="MLSSLFGSPTVDAIFSDRGRLQGMLDFEAALAAAEARAGVIPAA
                     AAPAISAKCRAELFDPTALAEATARAGVPAIPLVKQLTALVAVDAPDAARFVHWGATS
                     QDVMDTGLVLQLREALVPIDNDLARLAEALAALAAAHKLTLLPGRTWLQHALPVTFGL
                     KAAGWLDTMERHRLRLTGLRPRLFALQFGGAAGTLAALGDRGLAVAAALAEELTLTLP
                     DIPWHTERDRLAELAMTCGMMAGSLGKIGRDLSLLMQTEVAEVFEPGGHGRGGSSTMP
                     HKRNPVTSAVVLAAATRAPGLVATLLASMVQEHERGLGGWQAEWVALPELVVLTAGAL
                     SHMADTLAKLEVHVERMQANLEGTQGLMMAEAVTLALGSALGRLAAHERVEVACRRAV
                     AEGRHLRQVLAEDAVVTARLDSGDLDRLFDPHNYLGVSAALVERVLAARRK"
     gene            complement(7044..7613)
                     /gene="pcaG"
                     /locus_tag="VLD58_00620"
     CDS             complement(7044..7613)
                     /gene="pcaG"
                     /locus_tag="VLD58_00620"
                     /EC_number="1.13.11.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR02423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018578 - protocatechuate 3,4-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0046278 - 3,4-dihydroxybenzoate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protocatechuate 3,4-dioxygenase subunit alpha"
                     /protein_id="HSB52821.1"
                     /translation="MSLIPTPSQTVGPYFSLGMAWLTTTDLAKDASVGERIVIAGSVL
                     DGDGQPIPDAVLEVWQANASGKYAHPEDTQERPVDPGFSGFGRIPTDKDGRFRFVTIK
                     PGATTGPGNTLQAPHILVALFMRGLGKQLYTRIYFSGEPANATDPLLGRIAEPARRET
                     LMASRIAGSDEYRWDIRMQGEHETVFFDC"
     gene            complement(7615..>7829)
                     /locus_tag="VLD58_00625"
     CDS             complement(7615..>7829)
                     /locus_tag="VLD58_00625"
                     /inference="COORDINATES: protein motif:HMM:NF012976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52822.1"
                     /translation="PSFLTRLVTQMYFEGDPLLRLDPIFNSVPDPAARARMVSSFDLE
                     TTIPEFAVGYRFDIILRGRNATPMES"
BASE COUNT         1283 a         2677 c         2715 g         1154 t
ORIGIN      
        1 tgttgccgac cgtggtccgc aagatttccc ctagcgcgag cgtcccgatg gcgaagtagg
       61 cgccgcgcag gcggaaggcg gccacgccga tgagcagagc gaacgccgtc gccaccaccg
      121 cacccgcccc catggcgagc aggatgggcg tgcccctgat ccagagcgtg cgcgccacca
      181 gcgccccgag gccgaagaag gctgcgtggc ccaggttcac ctggccagcg tagccggcca
      241 cgatgttcca gctttcggcc agggtgatcg agagcaggat gagaaagacg aagttgagga
      301 cgtcgtcgcg atggaggagg aggggcagca gcgccagcgc caccaaggcg agaagggcca
      361 tggccgccca gccgatttcg cgccgcgtgg aggggtacct cattgcccga acagcccccg
      421 cgggcggatg acgagcacga tcacgaagag gatgaggccc acgacctcgc ggtagggccc
      481 gccgaaggcg gcggcgctcc ccgcctccgc cagacccagg agcagaccgc cgacgaaggt
      541 accgaaggtc gagcccagcc ctgccaggac gacgacgatc agcgccttga gcgtccactc
      601 gagtccgatg gaagggttga tcgagtagcc cacgctgacg agggtcccgg cggcgccggc
      661 gagccccgtg ccgatggcga aggcgagcag gtacgcgcgc cggacgtcga tgccggtgag
      721 cacggcgccc tgccagtcct cggccgttgc ccggatggcc tggccccacc gccagtgctt
      781 cagcatgaga tgcaggccgc cggtcagggc gaaggccagc gccaggctga ggagacggac
      841 gaccggaatc gagaggtcgc ccaggctgat cacggcgccg ccgtacggcg tgtcgatgga
      901 gcgctcgtcc gcggtccaca gccggacggc cagagcgtgg agcgtgagcg cgaggccgaa
      961 accgatgagc agcgagttct tcacccgcgt ttcctcgtcg gcccgcacca cgaagccgaa
     1021 gagcgcggag tacagggcga gacccagcag gagcgacagc ggcaggacca gcaagagcga
     1081 gacgaacggg tcgaggccga gaagggcaaa gagccagtac gccccgtagc cgccgagcat
     1141 gatcaaatcc ccgtgggcga cgttgaggat cttgaggacg ccaaagacga gcgacagccc
     1201 cagggccgcc agcccgtaca gtccgccgat caggcagccg aggacaagct gctgggccag
     1261 gatgctcaca gcgcgaagta ctccggcgcg gccagcgggc ccaggtaggc gcgccggacg
     1321 tgcgggtccc ggaggagtgc cgcgccgctc ccttccccca cgatgcagcc cgtttccagg
     1381 atgtacgccc ggtgggcaag gctgagcgcc gcgtggacgt tctgttcgac caggaaaacc
     1441 gcaaccccgt tgcggttgat ctcgcccatc acctcgagga tcgagcgcac caagaggggg
     1501 gcaagtccga gcgagggctc gtccaggatc aggagcctcg gatcggtcat gagggcgcgc
     1561 ccgatggcta ccatctgctg ctggccgccg gacaacacgc ggaccatgtg ccggcggcgc
     1621 tcgcgcaggg cggggaagag ggcgtacacc cgctcgaggc tcgcctgccg ggtaccccgc
     1681 gcccgcgcgg cgaaggcgcc cagcgcgaga ttctcctcga cggtcatgct gccaaaaagg
     1741 cggcgcccct cgggcaccat ggccaggccc cgctcgacga tcaggtggcc ggggacgcgg
     1801 cccaggtcct caccctgcca gcggatggtg cccgccttgg gacgcaggag cccggcgatc
     1861 gccttgagga gcgtggtctt cccggccccg ttgggaccca gcagggcgac gatctcgtcc
     1921 cgccggacgg agagcgtcac gcccgacaag acccggacgt cgccataggc gacttcgagg
     1981 tcggagatct caagcacgca tccagctccc cggatccccg ccgagatacg cgtcgaggac
     2041 ggcgggatcg gcagccacgg cctggggtgg gccctcggcg atcttctcac tggcgctgag
     2101 gacgatgatt cgacccgaga gcgccatgag ggcccacacg atgtgctcca ccatgaggac
     2161 ggtcatcccc tgggtcgcga gtgtccggat gagcgccatg gcgctcgccg tctcggcggg
     2221 attcaggccg cccaggtact cgtcgaggag cagcaggtcg ggcgaggtcg ccagcgccct
     2281 tgccagctcg agacgcttgc gctcgacgag ggtgagatcg gcggcgcgcg cacggccctt
     2341 ggcgtccagc ccgaccaggg ccaggagttt ccgggcgtcg gtgccttccg gcgcgcgccc
     2401 gtagagctgg cccacgcgga cgttgtcgag caccgacagc gtggggaagg gccgcaccag
     2461 ctgaaaggtg cgggcgatgc ccttgccaca gatccggtga ggagacagac cgccgatctc
     2521 ctcgccgcgc aggcggatcg aaccagcatc gggggcgagg gcgccggcga tcaggttgaa
     2581 gagggtcgtc ttgccggagc cgttgggccc catgatgccg aggacctctc ccggctcgat
     2641 ggcgaagctc acgccgctga gggcacggat gccgccgaag gacttggtga gccgctcgac
     2701 ctggagcagg ggcaccgggg ctagcgcttc gcgaacggcg gggccgggta cacgacgggc
     2761 atcgtcgccg attccttcgg ccagatcagc tcctgcttgc cgttgatcca ttggacgagg
     2821 acggactgga tgatgccggt gccgtcggga cggaacttca ccggccctat cacggtggtg
     2881 aggtccgtgg ccgcgatggc ggcccggacc ttctcccggt ccagggaacc cgcgcgggtc
     2941 aacgcgtcgg cgaggatctg gacgcacgca taggccggac ccacgatggg atcggcaggg
     3001 cgcccgtact tcttctggtg cgcgtcgttc agctccttca cgcccggcgc cttcacggcg
     3061 tggtgccagc ctggggccag gatcacgtcg tccccatcct tcccgaggtt cttcgaccag
     3121 acgggcgggt cggcggcccg gatcagcagg gacatcttgg gcgtgtagct gagctccttc
     3181 atctgcttga ccatggtcat gccgtcgggc ggggtcggga cggcgaagac ggcgtcggcg
     3241 ctggcgctct tggccttgag gatcatgtcg gagaaatcct tggctcccgg cgcgtactcg
     3301 gactgcacca cgacctgata accggccgcc ttgccgccat cccgccacgc ccgcgtcatc
     3361 tcggcccccc agtccgtctt ctcctggaag atggccacgg tcttcacccg ctcggcggcg
     3421 ggcagggagc cgaggaaacc gacgagctgc tcggcgatgt cgggcgactt ccagaagggc
     3481 gagaacaggt aacggaaccc ctgctcgtgg atcttcttga gggcgaaggc gacgcccagg
     3541 taggggatct tgttcttctc ggcgaccgag gcggcggcgg cgtggaggtc ggaggcgaag
     3601 ccgcccaggt aggcgacgac atcctgggat gccagtgtct ccagccggct cacggtcttg
     3661 gtagcgtcgg actcgtcatc gaataccacc agctccaggg gcagcttctt gccgccgacg
     3721 ctcacaccgc ccgccgcgtt gatgtgctcg atggcgagct cgtagcccgc ccgcacctgg
     3781 gcaccgcccc cgccgtagcg tccggtgagg ggcaccacgg cgccgacctt gatcgtctgg
     3841 gcggccacac ccacgggtcc ggccgccgcc aggacggcca gggcgatcag ggcactcatt
     3901 gctcctcgtc tcatgatccc tccctccttt gcccttctgc gtgtgctcgg cttccccaga
     3961 cggcgcgggc ggtggcggcg accacctcga gcttccggcg ctgggtctcg ggcgagatgc
     4021 ggttgccctc cagggtggag gcgaagccgc actgcggtga gagcgccagc cgatccagcg
     4081 ggacgacctt ggcggccgcc cggatccgcc gggtcagctc ctcgactgtc tccaggcgca
     4141 tcttcttcgt cgtgaccaga cccagcacca ccatccggtc gtcggggacg gcgcggagcg
     4201 gctcgaagct cccggagcgc tcgtcgtcgt actccaggag gaagcgccgg aaccgcgtgc
     4261 gccggaacac ccgctcggcg atgggttcgt agccgccttc cgcgtagaac atcgactggt
     4321 tgttgccccg gcagatgtga atgccgaagg tgacgccggg atggtccccg atgacggcgt
     4381 tgtccatctc gatgcaggta tcgatgagcc ggtcggggtc gctgccgcgc tggcgatagc
     4441 cctcgcggat cgacgggtcg aggagcgccg cgtactgggg cgcgtcgatt tggatgtagc
     4501 tgcagcccag gcggaccagc tccgcgacct cgcgacgggt gaaatcgacc acgtcggcca
     4561 ggtaggcgtc acgcgtcggg taggcgccgc gggacttctc cggatcgtag taggcggccg
     4621 cctgctgggc gctgatgagc gtggtcttgc acgggccgcg ggcgcgggcg cgcaggtaca
     4681 cgaactcctc ggcgcacatg ctccgccgcc agcggagccg ctcgacgacg acagggcgct
     4741 tgaagacgag ctgttcgccc tgctcgttgc ggaaggggat ggcccacccc ccgagcttgt
     4801 cgaacccatc cagcgcctcg atcagatgac cgaagaaggc gtagcgccgc atctctccgt
     4861 cggtgatgat gtcaagaccg gcttgttctt gcagcgcaat ggcctcgtcg acggctcgat
     4921 cctcgacccg cttgaaggcc gccggatcca ggcgtccgcc ctcggcctcc tgacgcgcct
     4981 cgaccaagta cccggggcgc aggaggcttc ccaccacgtc gctccgatag gttgtcatgg
     5041 gctgcccctt ggctcggccg aatccgtcag cgtctggtca tgcctggatg tggctctcgg
     5101 cccatcaggg ccgatctctt cggctggtgg cggctcgcga tccatggtcg caaagacttt
     5161 ctcggccatc cggaaggctg cgttggccgc cgggatcctg caggagatgg ccgcctgaag
     5221 caggacctcc cggatgtcat cccggccgag gccgttgttg agggcggccc tcacgtgcag
     5281 ccggaactct tcggagcggt tcaatgccac cagcataccc aaggtgatca ggcatcgcgt
     5341 acgcctctcc agaccggggc gagtccagat ctctccccag gcgtagcgcg tgatcaggtc
     5401 ctggaactcg cggttggatg cgttgagccg ggccagcgac cggtcgacgt gggcatcgcc
     5461 gagcacctcc cggcgcaccc gcatgcccgc ctcagcgcgc tggcgctcgt ccatgctgac
     5521 tcccccggac cgatcggaga tgttcccagg gcgttgccga tgccgctcgg cgcagcggac
     5581 gtcgcgttga ttaccctggt gcgcccgcca gggttacttc cgacgggcgg cgagcacgcg
     5641 ctcgaccagg gccgcagaca cgccaagata gttgtgtgga tcgaagaggc ggtcgagatc
     5701 cccggagtcc agccgggccg ttaccacggc gtcttcggcc aacacctggc gcagatgccg
     5761 accctctgcc accgcgcggc ggcacgccac ttcgacccgt tcgtgcgcgg ccagccgacc
     5821 gagcgccgat cccagtgcca gcgtgaccgc ctcggccatc atcagcccct gggttccctc
     5881 gagattggcc tgcatcctct cgacatggac ctcaagcttg gccagcgtat cggccatgtg
     5941 gctgagggcg ccggcagtca ggaccaccag ctcgggcagc gccacccact ctgcctgcca
     6001 gccgcccagg ccgcgttcat gttcttggac catcgaggca agcagcgtgg cgaccagacc
     6061 gggggcgcgc gtcgcggcgg ccaacaccac ggcgctggtg accggattgc gcttgtgcgg
     6121 catggtcgac gagccgcccc gtccatggcc gcccggctcg aagacctccg cgacctcggt
     6181 ctgcatgagg agcgagaggt cgcgcccgat cttgcccagg ctgccggcca tcatcccaca
     6241 ggtcatcgcc agctcggcca gacggtcgcg ctccgtgtgc cacggaatgt cgggtaaggt
     6301 cagcgtgagt tcctcggcca gggccgcggc gaccgcaagg ccgcgatcac cgagggccgc
     6361 gagggttcca gcggcaccgc cgaactgcag cgcaaacaga cgcggccgaa ggccggtcag
     6421 acggaggcga tgccgctcca tcgtatccag ccatccggct gccttcagcc cgaaggtgac
     6481 cggcagcgcg tgctggagcc aggtgcggcc gggcagcagc gtcaacttgt gggcagccgc
     6541 cagcgcggcc agcgcctcag ccaggcgggc cagatcgttg tcgatcggga ccaaggcctc
     6601 gcgcagttgc agcaccaggc ccgtgtccat gacgtcctgg ctggttgccc cccaatggac
     6661 gaaacgcgcc gcatcggggg catcgaccgc gaccagggcg gtgagctgct tgaccagcgg
     6721 tattgcaggg acgccggccc gcgcggtcgc ctcggcgagc gccgtcgggt cgaacagctc
     6781 ggcccgacac ttggccgaaa ttgccggcgc cgcggctgcc gggatcacgc cggcccgcgc
     6841 ctcggccgcg gcgagcgccg cctcaaaatc cagcatgcct tggaggcggc cccggtcgga
     6901 gaagatggcg tcgaccgtgg gggatccgaa caggctgctg agcaaatgac ctgtcccgga
     6961 agtcatcgcc acccgccgtc ccccctcaca tggcgcccgg catgccgacg cattcgacag
     7021 acccggcggc gagacaatcc ccctcagcaa tcgaaaaaga ccgtctcgtg ctctccctgc
     7081 atgcggatgt cccagcgata ttcgtcgcta ccggcgatgc ggctcgccat cagggtctcg
     7141 cgacgcgccg gctccgcgat ccgtcccagc agcgggtccg tggcgttggc cggctcgccg
     7201 gaaaagtaga tccgagtgta gagctgcttg cccaggccgc gcatgaacag ggcgacgagg
     7261 atgtgcggcg cttgcagcgt gttgcccggt cccgtcgtgg ctccaggctt gatcgtcacg
     7321 aaccgaaacc gcccatcttt atccgtcggg atccggccga agccgctgaa tcccggatcc
     7381 acaggcctct cctgcgtgtc ctccggatgg gcatacttgc ccgaggcgtt ggcctgccac
     7441 acctccagga cggcatcggg aatgggttgg ccgtcgccgt cgagcacgga tccggcgatg
     7501 acgatccgct caccgacgga ggcatccttg gcgagatcgg tggtggtcag ccacgccatg
     7561 ccgagactga agtagggccc gacggtctgg gagggggtcg gaatcaggct cacgtcacga
     7621 ctccatgggc gtcgcgttgc gaccgcgcag gatgatgtcg aagcggtaac cgacggcgaa
     7681 ctccgggatc gtcgtctcca gatcgaagga cgagaccatg cgcgcacgcg cggctggatc
     7741 gggtacgctg ttaaagatgg gatccagccg caacagggga tcgccttcga aatacatctg
     7801 cgtcaccagt ctggtcagga agctcggtc
//
LOCUS       DATIFF010000038         1296 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_773272, whole genome shotgun sequence.
ACCESSION   DATIFF010000038 DATIFF010000000
VERSION     DATIFF010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_773272"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1181
                     /locus_tag="VLD58_00630"
     CDS             <1..1181
                     /locus_tag="VLD58_00630"
                     /inference="COORDINATES: protein motif:HMM:NF013662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase-F iron-sulfur
                     binding region domain-containing protein"
                     /protein_id="HSB52823.1"
                     /translation="AHGGYEALRRALELGPEGVIREITDAKLMGRGGAAFPTGRKWDA
                     VARQPVRPHYLICNGDESEPGTFKDRVIMEGDPFAVIEAMTIAGYATGCAHGFIYVRG
                     EYPLAVERLQHAIDTARARGLLGGDVLNRGFAFDVEIRRGGGAYICGEETAIFNSIEG
                     FRGEPRNKPPFPVQAGVFGKPTLINNVETLVNVLEILRIGGPAYAKIGTEGSSGPRLF
                     CVSGTVTRPGVYEVPFGATLRQLLELAGGVAGGRPLKAILLGGAAGGFVRPDEIDLPL
                     TFEGTRAAQTTLGSGVIMVFDDTVDLLDTILRIAAFFRDESCGQCVPCRVGTVRQEEA
                     LHRLKLGRTRDGVGGELALLEEIGQAMKDASICGLGQTAYSAVESAVKRLHLFSGATT
                     "
BASE COUNT          201 a          426 c          466 g          203 t
ORIGIN      
        1 gggcccacgg cgggtacgag gcgctccgcc gggccctgga gctggggccg gagggcgtca
       61 tccgggagat caccgacgcg aaactgatgg ggcggggtgg cgcggcgttc cccaccggca
      121 gaaaatggga tgccgtcgcc cggcagccgg ttcggccgca ctatctcatc tgcaacggcg
      181 acgaatccga gcccggcacc ttcaaggatc gcgtcatcat ggagggcgat ccctttgccg
      241 tcatcgaggc gatgacgatc gccgggtatg cgaccgggtg cgcccacggc ttcatttacg
      301 tgcggggcga gtacccgctg gccgtcgagc ggctgcagca cgccattgac acggcccggg
      361 cccgcggcct gctgggtggc gacgtcctga atcgcggctt cgccttcgat gtcgagatcc
      421 gccggggcgg cggcgcctac atctgcggtg aagagacggc aatcttcaac tcgatcgaag
      481 ggtttcgcgg ggaaccccgc aacaagcctc ccttcccggt gcaggccgga gtcttcggca
      541 agcccacgct catcaacaac gtggagactc tggtcaatgt gctggagatc ctgcggatcg
      601 gcggcccggc gtacgcgaag atcgggaccg aagggtcttc cggtccgcgg ctcttctgtg
      661 tctcgggcac cgtgacccga cccggggtct acgaggtgcc gttcggcgcc accctgcggc
      721 aactgctgga actggccggc ggggtggccg ggggccgccc gctcaaggcg atcctgctgg
      781 gcggggcggc gggcggtttc gtccggcccg acgagatcga cctgccgctc accttcgaag
      841 gcacgcgggc agcgcagacg accttggggt cgggcgtcat catggtcttc gatgataccg
      901 tggacctgtt ggacaccatc ctgcggatcg ccgccttctt ccgggacgag tcctgcggac
      961 agtgcgtgcc ctgccgtgtg gggaccgtgc ggcaggagga ggcgctgcat cggctcaagc
     1021 tcggccgcac ccgcgacggg gtcggcgggg agctggccct gctggaggag attggacagg
     1081 cgatgaagga cgcttcgatc tgcggcctgg gccagaccgc ctacagcgcg gtcgagtccg
     1141 cggtgaaacg actccatctc ttcagcggag cgaccacgtg accaccgcct tcgtgccgct
     1201 ggaaccgccc cgccggatcg ttgacctcaa gatcgacggg aagccggtgc aggtgccgga
     1261 gggcaccacc atccacgacg cctgtcagca gcaggg
//
LOCUS       DATIFF010000039         1370 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_4450, whole genome shotgun sequence.
ACCESSION   DATIFF010000039 DATIFF010000000
VERSION     DATIFF010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1370
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4450"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..180)
                     /locus_tag="VLD58_00635"
     CDS             complement(<1..180)
                     /locus_tag="VLD58_00635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52824.1"
                     /translation="MIVSLALTLTLLGLPDTATVVRDIPVARGEFLRTTSVGGGRPVV
                     LIPGLFGAAFGYRRIV"
     gene            435..>1370
                     /locus_tag="VLD58_00640"
     CDS             435..>1370
                     /locus_tag="VLD58_00640"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB52825.1"
                     /translation="MPQLLSRLQSALADRYRLDSEIGAGGMATVYLAHDVRHDRRVAL
                     KVLRPELSAVIGAERFLAEIKLTANLQHPHILPLFDSGEADSFLFYVMPYVAGETLRS
                     RLNREKQLPVADAVRIASEVASALDYAHRHGVVHRDIKPENILLHEGQALVADFGIAL
                     AASKASGDRMTETGMSLGTPHYMSPEQAMGERELTARSDVYALGAVLYEMLTGDPPFT
                     GSTTQAIVARVVTESPRPLLPQRHTIPPHIEAAVLTALEKLPADRFESARAFAEALGD
                     PGYAGSRVTGTRVLPAARGIGGGHGSLRWLVPAAAL"
BASE COUNT          223 a          505 c          449 g          193 t
ORIGIN      
        1 gacgatccga cggtagccga aggcggctcc gaagagcccg ggaatgagca cgaccggccg
       61 cccaccccca acgctcgtcg tccgcaggaa ttccccccgt gccaccggga tgtcgcgaac
      121 caccgtggcg gtatcgggca gaccgagcag ggtcagggtc agggccagac tgacgatcac
      181 aagccacctc ccagcgcaac gagcattgac caagcggtta atgaatagat acgatatatt
      241 atccgcgcgg tcaatagcag accggcgctt gctccgcccg ggacgccttg acgctcgcgc
      301 tctgaacgcc ccgggatgaa cctgccccgg gcgtttgctg tggccgaagg caggccggtc
      361 gggcccggct ggctgccgac tggctaaacc ggcggctccc ggccatcttc ggacacccat
      421 ttcacaacgc gccaatgccc cagcttctca gccggcttca gtccgccctg gccgaccgct
      481 atcgcctcga tagcgagatc ggcgccggcg gcatggccac ggtgtacctc gcccacgacg
      541 tccggcacga ccggcgcgtc gccctgaagg tcctccggcc ggagctgtcc gccgtcatcg
      601 gggccgagcg cttcctcgcc gagatcaagc tcacggccaa cctgcagcac ccgcacatcc
      661 tcccgctctt cgactcgggc gaggccgact ctttcctctt ctatgtcatg ccctacgtcg
      721 cgggcgagac cttgaggagc cggctcaacc gggagaagca gctgcccgtg gccgacgctg
      781 tgcgcatcgc cagcgaggtc gcttcggcgc tcgactacgc ccaccggcac ggggtcgtcc
      841 accgcgacat caagccggag aacatcctgc tgcacgaggg acaggcgctg gtggcggatt
      901 tcgggatcgc cctggcggcg agcaaggcga gcggcgaccg gatgacggag accgggatgt
      961 ccctcggcac cccccactac atgagccccg agcaggcgat gggcgagcgg gagctcaccg
     1021 cccggtcgga cgtgtatgcc ctgggcgccg tgctctacga gatgctcacc ggcgatccgc
     1081 cgttcaccgg gtccaccacc caggcgatcg tggcccgggt ggtgacggag agcccgcgcc
     1141 cgctccttcc tcagcgccac accatcccgc cccacatcga ggccgcggtg ctcaccgcgc
     1201 tggagaagct cccggccgac cgcttcgaga gcgcccgggc cttcgccgag gcgctgggcg
     1261 accccggcta cgccggctcg agggtcaccg gcacacgggt gctgccggct gcgcgaggaa
     1321 tcggcggggg acacggatcg ttacgatggc tggtgccggc ggcggcgctc
//
LOCUS       DATIFF010000040         1017 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_466233, whole genome shotgun sequence.
ACCESSION   DATIFF010000040 DATIFF010000000
VERSION     DATIFF010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_466233"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..344
                     /locus_tag="VLD58_00645"
     CDS             <1..344
                     /locus_tag="VLD58_00645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52826.1"
                     /translation="PAPIAAEDAAPFLGSYVYSTREAGDTTPPSTITLTHENGMLIAH
                     WAPAPDPELASFVLIRLKDDWFIMGILRSGTIYDVFEDEVFEFSRTSGKVTGFELRGR
                     ADKLEGVGERR"
     gene            complement(350..>1017)
                     /locus_tag="VLD58_00650"
     CDS             complement(350..>1017)
                     /locus_tag="VLD58_00650"
                     /inference="COORDINATES: protein motif:HMM:NF013300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004560 - alpha-L-fucosidase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-L-fucosidase"
                     /protein_id="HSB52827.1"
                     /translation="GSAGEPNWSTVDPSAVPAPGADGPGITEALQHGDPAGTVWRPGE
                     ADVSIRPGWFWHPEEDSSVRSVEDLVELYFASVGRNAKLLLNVPPTTEGLLHETDVAR
                     LTGFGDRLKEMFAVDLAAGARRHWRAGPGFTGGWEIDLGREVTAGLVSLQEEIATGQS
                     IARYRLEGWAGGAWLPLSRGTTIGYRRLDRFAPTAISRVRLTVEEALAAPRLARLTLH
                     AGM"
BASE COUNT          161 a          373 c          328 g          155 t
ORIGIN      
        1 atccggcgcc catcgccgcc gaagacgcgg cgcccttcct cggctcgtat gtgtacagca
       61 ccagggaggc gggcgacacc acgccgccgt cgacgatcac gctcacccat gaaaatggca
      121 tgctgatcgc ccactgggcc ccggcccctg atcccgaact ggccagcttt gtgctgatcc
      181 gcctcaagga cgactggttc atcatgggga tactgcggag cggcacgatc tacgacgtgt
      241 tcgaggatga ggtgttcgaa ttctcgcgga catcggggaa ggtgaccggg ttcgaactgc
      301 gcggccgggc ggacaagctc gagggcgtcg gcgagcggcg ctagccggct cacatccccg
      361 catgtagtgt caggcgggcg agacgcggtg ccgccagagc ttcctccacc gtaagccgga
      421 cacggctgat ggcggtcgga gcgaaccggt ccagcctgcg gtagccgatc gtggtcccgc
      481 gcgagagcgg cagccatgcg ccgccggccc agccttcaag ccggtacctc gcgatgctct
      541 ggccggttgc gatctcctcc tgcagactca ccagcccggc agtgacctcc cggccgaggt
      601 cgatctccca gcctccggtg aatcccggtc ccgcccgcca gtgccggcgc gcgcccgcgg
      661 cgagatccac cgcgaacatt tccttcagcc gatcgccgaa cccggtgagc cgagcgacgt
      721 cggtctcgtg cagcagtccc tccgtcgtcg gcggcacgtt gagcaggagc ttcgcgttgc
      781 gccccaccga ggcgaaatag agttcgacca gatcctcgac gcttcgtaca ctcgagtcct
      841 cctccggatg ccagaaccag ccggggcgga tcgacacatc ggcctcccct ggccgccaga
      901 cggtgcctgc gggatccccg tgctgcagcg cctcggtgat gcccggacca tcggccccgg
      961 gcgccgggac cgccgaggga tcgaccgtcg accagttagg ctcccccgcg ctccccc
//
LOCUS       DATIFF010000041         1772 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2158810, whole genome shotgun sequence.
ACCESSION   DATIFF010000041 DATIFF010000000
VERSION     DATIFF010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1772
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2158810"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..355)
                     /locus_tag="VLD58_00655"
     CDS             complement(<1..355)
                     /locus_tag="VLD58_00655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52828.1"
                     /translation="MQYRNLFAAATVAALVFAGCRGYDAATAPSRPAAAGTPSYGATE
                     GPASALPLQELAQAKAAAARYHDVRNAIADGYHDIDLVIPNMGRHFLKDGLIDTRFEA
                     DHPEALVYSPDSTNLL"
     gene            complement(409..825)
                     /locus_tag="VLD58_00660"
     CDS             complement(409..825)
                     /locus_tag="VLD58_00660"
                     /inference="COORDINATES: protein motif:HMM:NF042549.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6632 domain-containing protein"
                     /protein_id="HSB52829.1"
                     /translation="MHPDSPTLRTLRVVLIVLGLTFIVGLYPLTQFWPAGWAWTPAQP
                     EYLQMILAIYATLGVFLLRAAREPLKSLSLIWFTVWSSVAHGLVMAVQVLRDPTERGH
                     LPGDVLVLFVVAVVLGLLTARATGSAETMPHAASAA"
     gene            complement(874..1380)
                     /locus_tag="VLD58_00665"
     CDS             complement(874..1380)
                     /locus_tag="VLD58_00665"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HSB52830.1"
                     /translation="MSRRSEALADRLEHGARMLADLASELTEAEWQTRMPHDGRPIGV
                     IIHHVASVYPIEVQLAQAVAAGKAVTGVTSKDIDTMNAGHAREHAGVTQAAALELLRR
                     NSAAAADAIRALTDAELDQAAPVSLYGDAPLTSQFVLEDHAVRHSYHHLARIRAALEP
                     VASASSVG"
     gene            1587..>1772
                     /locus_tag="VLD58_00670"
     CDS             1587..>1772
                     /locus_tag="VLD58_00670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52831.1"
                     /translation="MTADTAEPRPGETSTGALRRLLRQRETVRAVAETISGELELQPL
                     LESILHHACELIGAEHGI"
BASE COUNT          282 a          556 c          678 g          256 t
ORIGIN      
        1 cgaggaggtt ggtcgagtcg ggcgaataca ccagcgcctc cggatgatcg gcctcaaacc
       61 gggtgtcgat cagaccgtcc ttgaggaaat gccggcccat gttcggaatc accagatcga
      121 tgtcgtggta gccgtcggcg atggcgttcc ggacgtcgtg atagcgggcc gcggcggcct
      181 tggcctgggc cagctcctgg agcggcaacg ccgaggcggg tccctcagtg gccccgtagc
      241 tgggcgtgcc ggcggcggcc ggccgactgg gcgcggtcgc ggcgtcgtac ccgcggcaac
      301 cggcgaagac gagcgcggcc acggtcgcgg ccgcgaacag gttccggtac tgcatggcga
      361 ttcctccggg aggtggatgg gatccgggga cgggggctgc taatcgggtt aggctgcgct
      421 ggccgcgtgg ggcatcgtct cggcactgcc cgttgcccgt gccgtaagca gccccagtac
      481 caccgccaca acgaagagca ccagaacgtc acccggaagg tggcctcgct ctgtcggatc
      541 ccgcaggacc tgcactgcca ttaccagccc gtgcgcaacg ctcgaccaga cggtgaacca
      601 gatgaggctc agagacttga gcggctccct cgctgcgcga aggagaaaca cgcccagcgt
      661 ggcatagatg gcaagaatca tctgcaggta ctcgggctga gcgggcgtcc aggcccaccc
      721 ggcaggccag aattgggtca gcgggtagag cccgacgatg aaggtgaggc cgaggacgat
      781 cagaacgacg cggagcgtgc gaagagtcgg cgaatcgggg tgcatcggga cctcggagaa
      841 cgaggggctg aacgacacgt gtgagaaagc ggcctaaccc accgaggacg ccgatgccac
      901 cggctccagc gccgcgcgaa tgcgggccag gtggtggtag ctgtgtcgca cggcgtggtc
      961 ctcgagcacg aactggctgg tgagcggggc gtcgccatag agggagaccg gggccgcctg
     1021 gtccagctcc gcatcggtga gcgcgcggat cgcgtccgcg gccgccgcgc tgttgcgccg
     1081 gagcagctcg agcgccgccg cctgcgtgac gccggcgtgc tcccgggcgt ggccggcgtt
     1141 catggtgtcg atgtccttcg aggtcacgcc cgtcaccgcc ttgcccgccg ccaccgcctg
     1201 ggccaattgg acctcgatcg ggtagacgct ggcgacgtga tggatgatga cgccgatggg
     1261 gcggccgtca tggggcatgc gggtctgcca ctcggcctcg gtgagctcgc tggcgaggtc
     1321 ggcgagcatg cgggcgccgt gctcgaggcg gtcggcgagg gcttcggaac gtcggctcat
     1381 tgaatgtctc cgggtgaagg gggcgatagc gcgggaatat cgagagcggg ggcacgcgcg
     1441 gcccatccgg ccgcaggccg gacttcggcc cgacgttcgc tggcgcgtca cctcacccgg
     1501 gacaggagcg catccctgac tttggtcagg ggtgggtgcg ggtgggcttg cgtcggatgt
     1561 ggccctcgtg ccaagatcgt ggcctcatga cggcggacac ggcggagcct cgaccgggcg
     1621 agacgagtac cggcgcgctg cggcggctcc tgcggcagcg ggagaccgtg cgcgcggtgg
     1681 ccgagaccat cagcggcgag ctggagctgc agccgctgct ggagagcatc ctccaccacg
     1741 cgtgcgagct gatcggcgcg gagcacggga tc
//
LOCUS       DATIFF010000042         2925 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2005198, whole genome shotgun sequence.
ACCESSION   DATIFF010000042 DATIFF010000000
VERSION     DATIFF010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2925
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2005198"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            323..1885
                     /gene="istA"
                     /locus_tag="VLD58_00675"
     CDS             323..1885
                     /gene="istA"
                     /locus_tag="VLD58_00675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011788482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HSB52832.1"
                     /translation="MAAERLSMRTIREILRLKWDCQRSNREIAQSCHIARSSVAECLA
                     RATATGLTWPLPPECDDGTLEARLYRRAGRPPGPPRPLPDWATLHQELRSPGVTLQLL
                     WQEYKAGDPAGLQYSQFCVHYRQWARTLDICLRQEHRAGEKLFLDYAGQSLWVTDPAT
                     GSRTPVALFIAVLGASNYTYAEATRAADLSSWIGSHVRAFEYLGGVPAALIPDNHKSA
                     VLHPDRYEPDLHPTYLDLATHYGTTILPTRVRRPKDKAKVETAVLIVERWIVAALRHR
                     TFFSLAELNAAIGELLEHLNSRRFRKLPGSRRTLFAALDQPALRPLPATPYVFAEWKR
                     ARANIDYHVALEDHYYSVPYQLVHHEVQLRFSATVVEIFHKGQRVASHLRSAQRGGFT
                     TDPAHRPKAHQEYLAWTPSRLVHWGDTIGPATGQLVAAILASRPHPEQGYRSCLGLLR
                     LSQQYPVARLEAACARALALRATSYKSVQSILRTGLDQQLLVPLATPPRPTHAHVRGP
                     AYYTRKETADVA"
     gene            1875..2636
                     /gene="istB"
                     /locus_tag="VLD58_00680"
     CDS             1875..2636
                     /gene="istB"
                     /locus_tag="VLD58_00680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003290589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HSB52833.1"
                     /translation="MLRSPTVEKLQALHLHGLLAAWEDQERQPSYAELPFAERLGLLI
                     DAEWTARENRRELQRLKSAKLRLPQACVEDLDFRTPRGLDKALIRSLVAGQWIAQHQN
                     LICLGPTGTGKTFLACALARQACRQGYTVRYVRAPRLFQDLALARGEGSYPLLLGQLA
                     RVELLVVDDWGIAPLTETERRDFLEVMDDRHGTRSTLLAGQLPVSHWHECIGDPTIAD
                     AICDRVVHNAHHVTLTGGSMRKARASLTPPASCDK"
BASE COUNT          492 a         1090 c          911 g          432 t
ORIGIN      
        1 ttcgggctcc tgaggcaccg ccagacgaaa aggtgaaaac aaataggctc gatcccctcc
       61 gcacgtgtcg ggccctactt cacccctcgg acccccaatt gaacaacagt gcctcgcaaa
      121 tcagtgcaag accatcctac gtgcgtattc cggcccattc cggccgccga ttccggtcga
      181 tgccggccac ccgttccggt aaatccccgg ccactcattc cggcgcaagc cggccacctc
      241 gggagcgggt agaagcgacg ctggatagcg cgagccctgc ggtactctcc tggaaattgg
      301 acacccaacc aggagggacc cagtggccgc tgagcgacta tccatgcgta cgattcgaga
      361 gatccttcgt ctgaagtggg actgccagcg cagtaatcgc gagatcgccc agagctgtca
      421 catcgcccgg agctcggtgg ccgagtgctt ggcgcgcgcc accgccaccg gcctgacgtg
      481 gccgctcccg cccgagtgcg atgacgggac cctcgaggcc cgcctctacc gccgggccgg
      541 ccgccccccg ggaccgccgc ggcctctgcc cgactgggcc accctccacc aggagctccg
      601 gtcacccggc gttaccctcc agctcctctg gcaggagtac aaggccgggg accccgccgg
      661 cctccagtac agccagttct gcgtgcacta ccgccagtgg gcgcgcaccc tcgacatctg
      721 tctgcgccag gagcaccggg ccggcgagaa gctgttcctc gattacgccg gccaatcgct
      781 ctgggtcacg gaccccgcca cgggaagccg cacgccggtc gcgctgttca tcgccgtcct
      841 cggcgcgagc aactacacct acgccgaggc cacccgggcc gccgatctct catcctggat
      901 cggaagtcac gtccgcgcgt tcgaatacct gggcggcgtg ccggccgccc tgatcccgga
      961 taaccataag agcgccgtgc tccaccccga ccggtacgaa cccgatctcc atcccacgta
     1021 tctcgacctc gccacccatt atggcaccac catcctcccc acccgggtgc gccgcccgaa
     1081 agataaggcc aaggtggaga cggcggtgct catcgtagaa cgctggatcg tcgccgccct
     1141 ccggcaccgc acgttcttca gtctggccga actcaacgcg gccatcgggg agctgctcga
     1201 gcacctgaac agccgccggt tccgcaagct ccccggctcg cgccggacgc tgttcgcggc
     1261 cctggatcag ccggcgctcc ggccactgcc cgccaccccg tacgtcttcg ccgagtggaa
     1321 gcgcgcccgg gcgaacatcg attatcacgt ggccctggag gaccactact acagcgtacc
     1381 gtaccaactc gtccaccacg aggtccagct ccggttcagc gcgaccgtgg tcgagatctt
     1441 ccacaagggg cagcgcgtgg cctcccatct gcggagcgct cagcgcgggg ggttcaccac
     1501 cgatccggcc caccgcccca aggcgcacca ggaatatctc gcctggacgc cgtcgcgttt
     1561 ggtgcactgg ggcgacacga tcgggcccgc caccggccag ctcgtggcgg ccatcctcgc
     1621 gagccgcccg catcccgagc aggggtaccg gtcgtgtctc gggctgctcc gcttgagcca
     1681 gcagtacccg gtggcccgac tcgaggccgc ctgcgcccgc gcgctggcgc tccgggcgac
     1741 ctcatacaag agcgtgcagt cgatcctccg caccggcttg gatcagcagc tgctggtgcc
     1801 gctcgccacc ccgccgcgcc ccacgcacgc tcacgtgcgg gggccggcct attacacccg
     1861 aaaggagacg gccgatgttg cgtagtccga ctgtggagaa gctccaggcc ctgcacctgc
     1921 atgggctcct cgccgcctgg gaggaccagg agcggcaacc ctcctatgcc gagctcccct
     1981 tcgccgaacg gctcggcctg ttgatcgacg ccgagtggac cgcgcgggaa aaccgacggg
     2041 agctccagcg gctcaagagc gccaagctcc ggctccccca ggcctgcgtc gaggacctcg
     2101 acttccggac gccccgcggg ctcgacaagg ccctgatccg aagcctggtc gccggccagt
     2161 ggatcgccca acaccagaac ctgatctgtc tcgggccgac cggcaccggg aagacgttcc
     2221 tcgcctgtgc cctcgcgcgc caggcgtgcc ggcaggggta cacggtccgc tacgtccgcg
     2281 ccccgcggct cttccaggac ctcgccctcg cccgcgggga ggggagctat ccgctgctct
     2341 tgggccagct cgcgcgggtc gagctgctgg tcgtggacga ctggggcatc gcccctctga
     2401 ccgagaccga gcggcgcgac ttcctggaag tgatggacga tcggcatggg acccggtcca
     2461 cactcctcgc aggacaactg ccggtgagtc actggcacga gtgcatcgga gatcccacca
     2521 tcgccgatgc gatctgcgac cgggtggtgc acaacgcgca tcacgtcacg ttgactgggg
     2581 gctcgatgcg gaaagcgcgg gcaagcttga caccacccgc gtcatgtgac aaataactaa
     2641 tgcccagcgt cgctacgctc cgacccggcc ggcatgcgcc ggaacgcgtg gccgtcatcc
     2701 cgccagtctg ggcggccgag aacaccggaa tacgcagtgt cgcgcgtaac agcggccccg
     2761 gtgggtgagc tgaaggctgc aatcaaggag ttcgacctgc cgacgccggg gtcgcatccg
     2821 cacgatccgg cgctggcccc ggatggatcg ctctggtaca cggggcagat ggccaacagg
     2881 ctggggcggc tggacccgaa gacgggtgag atcacggagt atccg
//
LOCUS       DATIFF010000043         6670 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_620404, whole genome shotgun sequence.
ACCESSION   DATIFF010000043 DATIFF010000000
VERSION     DATIFF010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6670
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_620404"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..445
                     /locus_tag="VLD58_00685"
     CDS             <1..445
                     /locus_tag="VLD58_00685"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HSB52834.1"
                     /translation="DDPVWTMGSRDAGPWEFPNPQELDNDPEIRMRVEAGPPRDRTFT
                     MRTPMPRMFIMDSPLADLELAPVNPELGRYFGTAEGVLVIDVPPESKLGLKPGDVVLA
                     VDGRRVRIPGQLFRVLQSYDPEETFQLQIMRMKKRETVTGTLTRP"
     gene            complement(393..2492)
                     /locus_tag="VLD58_00690"
     CDS             complement(393..2492)
                     /locus_tag="VLD58_00690"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HSB52835.1"
                     /translation="MWTEMFDHIFQDYVHWRRNYFPADPWIVGRLKRRSPEHESWLDT
                     LTTQLDATLSELKFHFPLHSPRYNAHMVSEQSLPAVLGYFAGLLYNPNNVTSESAPIT
                     VALEIEVGRMIAAMLGYDPRQAWAHITSGGTIATTEALWVARSVQFTPLIVRDYCRAN
                     RLDFRIPLPNGTEAPATDIDDATLVALRPQDTLRLLRSLTRAAQAATGRPADEVVRRL
                     NEYVSENRFNVSRQGLGTVLGATGLRPVVFATAAAHYSIAKACNVLGYGEAALRLVPV
                     NDRFQLNADALGAALEALAPDEYVAAVIGVVGTTEEGAVDPIHRIRDIRSTLEKRRNR
                     SFWLHVDAAWGGYFRTLFQGLPVAHMPNAGIETVAAEYSRALDLHQRFDVDVGTGGTS
                     DIRTYETRWGDTDTCAAFLAMAEGDSTTVDPHKMGYIPYPAGVIAFRNGLVTEFITQR
                     AQYLSDEPDGIGAFDQQQPPAFGPHILEGSKPGAAALACWLAHRTIPLTTDGHGKVVR
                     TTLLSAQRFCRLLSAHQHLFARLEQQRGAAGPCPTPFTFMPVTEPETNIVCFLARPMQ
                     WHQGSMRPACVPLADINQLNQQIYAAASVPGARAHQTSTVQPFFVSRTRFEEQQYQAA
                     SLGPLLGRLGVGVEEYQREGLFVLRSTVMNPWHEEAQRAGIDYLSEFLAFLHRVTAEA
                     LTAGSASPSPSRASSSA"
     gene            complement(2719..3294)
                     /locus_tag="VLD58_00695"
     CDS             complement(2719..3294)
                     /locus_tag="VLD58_00695"
                     /EC_number="3.2.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0019172 - glyoxalase III activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase family
                     protein"
                     /protein_id="HSB52836.1"
                     /translation="MSEPAVHVLVFDGFADWEPSYALAQIRQTGAAPVVSVGLSHHPV
                     RSMGGLTVMPDVTVEQIAPEQVRLFILPGGDQWETAGLDARLVSLLEGCMANGAPLAA
                     ICAATTAVARAGLLHGRAHTSNGLEYLKAQVPDYIFENDYVDQLAVRDRGLITASGLG
                     AVEFAREIFAELEVFSEGDLEMWYRMFKYGQ"
     gene            complement(3296..5008)
                     /gene="aroF"
                     /locus_tag="VLD58_00700"
     CDS             complement(3296..5008)
                     /gene="aroF"
                     /locus_tag="VLD58_00700"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: protein motif:HMM:NF008865.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HSB52837.1"
                     /translation="MRIAVQGTRGSFSEAAARQQWPDLETVPCREVGDVVAAVREGRA
                     DGGCLAIENSLVGSVTPTYDLLQEAFGEGDLHLSREILLPVHHSIMGVPGAQLSQITH
                     VLSHPVALGQCRVWLSRHLPNATLVNAWDTAGSAEIVAREKDPTQAAICARHAADAYG
                     LSVFEDRIEDDPTNQTRFLTFTHVPTPSEESAGPQKTSLIVWTDHRPGMLAAVLQAFA
                     GRGVNLTSLQSRPERSAPWTYRFYFDVEGTRGEPRLAEALESIEALASRIVVLGSYSS
                     WQGEGAMPQGPTMPRPPHLRPKPDLPLFDRRQHPEGTRVMVGNVEIGGDRPVIIAGPC
                     SVESEEMIYQTAEGVSAAGADILRGGAFKPRTSPYDFQGLGVRGLKYLAEARERTGLP
                     VVTEVMSWEEVPLVARYADMLQIGARNMQNFALLRAAGRSGKPILLKRGAGATIEEWL
                     HAAEYVLSHGNPNVVMCERGIRTFERATRHTLDLNAVALVRERTHLPVIADPSHAAGV
                     RAIVPALTLASLAAGAQGVIIEVHPDPEHALSDGPQSLDLPAFAKLAQEIAGLRNSEI
                     GTRN"
     gene            5249..5809
                     /locus_tag="VLD58_00705"
     CDS             5249..5809
                     /locus_tag="VLD58_00705"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52838.1"
                     /translation="MNSTPEPLLACPIMAELVAKHQAPAFEQQRPFPALVDAIVSQQI
                     SGKAAASILARLKTLVPIAPAALAEADLRRLRRAGLSRAKAVYVRELARFAVEGGLRG
                     LRRLPDDAVVERLTSVKGVGVWTAEMFLIFSLGRPDVWPVGDGGVQRAAMNLYGVRNV
                     KQLARLGDRFRPYRTHAAWYFWRSLG"
     gene            complement(5810..>6670)
                     /locus_tag="VLD58_00710"
     CDS             complement(5810..>6670)
                     /locus_tag="VLD58_00710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52839.1"
                     /translation="GPWQITSDIQLNWRPSFWGLDQRLTLSMVTSNLLGGLDQLFHGN
                     DLHGWGASYRPDATLLIVRGFDPVAQQYTYQVNQRFGDVRSAQALRQPFQIGVQLRFA
                     LGTTGFFGGGGAPGGGGGPRGGFGGGGFDRGGFGPGGARPDGPAGAGAAPGAAGAPPG
                     DSAARFENRLARIMPDPVAKILEYSFQIKINDDQTAKLNEISQRFVTSRDSLGHAIQK
                     EIEAAGPRPDPAVLFSALRGRIEAGRNLMSQMLELAHGVLTAEQWAALPEEAKTVRQA
                     GPGGGFRRPQ"
BASE COUNT         1073 a         2228 c         2311 g         1058 t
ORIGIN      
        1 tgacgacccg gtctggacca tgggatcgcg tgatgcggga ccgtgggagt ttcccaatcc
       61 gcaggaactc gacaacgacc cggagatccg gatgcgggtg gaggctggcc cgccccgcga
      121 ccggaccttc accatgcgca ccccgatgcc gcgcatgttc atcatggatt cgccgctggc
      181 cgacctggaa ctcgcgccgg tcaatcccga gctgggccgc tacttcggga cggcggaggg
      241 agtcctggtg atcgacgtgc cacccgagtc gaagctggga ctcaagcctg gcgatgtggt
      301 actggcggtg gacggacgcc gggtgaggat cccgggccag ctcttccggg tgctgcagag
      361 ctacgacccg gaagagacct tccagctgca gatcatgcgg atgaagaagc gcgagacggt
      421 gacggggacg ctgacccggc cgtaagcgcc tccgccgtca cccggtggag gaacgccagg
      481 aactcggaca ggtagtcgat ccccgcccgc tgggcctcct cgtgccacgg attcatcacc
      541 gtcgacctca gtacgaacaa cccttcccgc tggtactcct ccactccaac acccagacgg
      601 ccgagcagcg ggcccaggct cgcggcctga tactgctgtt cctcgaaccg ggtacgtgag
      661 acgaagaagg gttgcaccgt cgaggtctgg tgggcccgcg caccgggcac actcgccgcg
      721 gcgtagatct gctggttgag ctggttgata tccgcgagcg ggacgcaggc cgggcgcatg
      781 ctcccctggt gccactgcat cggccgggcg aggaagcaga cgatgttggt ctcgggctcg
      841 gtgaccggca tgaaggtgaa cggcgtgggg cagggcccgg ccgcgccgcg ctgctgctcc
      901 agtcgggcga agagatgctg gtgcgcgctc aggaggcggc agaagcgctg ggcgctcagg
      961 agcgtggtgc ggaccacctt gccgtgcccg tcggtagtga gcgggatggt gcggtgggcc
     1021 agccagcacg ccagggcggc cgctcccggc ttggagccct ccaggatgtg gggaccaaag
     1081 gccgggggct gctgctggtc gaaggcgccg atcccatccg gctcgtcgct caggtactgg
     1141 gcccgctggg tgatgaattc ggtaaccagt ccgttccgga aggcgatcac gccggcggga
     1201 tacgggatgt agcccatctt gtgcggatcg accgtggtcg aatcgccctc ggccatggcc
     1261 aggaaggcgg cgcaggtgtc ggtgtcgccc cagcgggtct cgtaggtgcg aatgtcgctg
     1321 gtgccgccgg ttcccacgtc cacgtcgaag cgttgatgca ggtcgagcgc gcgggagtac
     1381 tcggcggcga ccgtttcgat gcccgcgttg ggcatgtgcg ccaccgggag cccctggaac
     1441 agggtccgga aatagccgcc ccaggccgcg tccacatgca gccagaagga acggttgcgc
     1501 cgcttctcga gggtggagcg gatgtcgcgg atccggtgaa tcggatcgac cgcaccttcc
     1561 tcggtggtgc ccacgacccc gatgacggcg gcgacatact cgtccggcgc cagggcctcg
     1621 agggcggcac ccagggcgtc ggcattgagc tggaagcggt cattgaccgg caccaggcgc
     1681 agagcggcct cgccgtagcc gagcacattg caggccttgg cgatggagta atgcgccgcg
     1741 gcggtcgcga acaccaccgg ccggagcccc gtggcgccca gcaccgtgcc caaaccctgg
     1801 cgcgagacgt tgaaccggtt ctcgctcaca tactcgttga gccggcgcac gacctcgtcc
     1861 gccggacgtc cggtcgcggc ctgggccgca cgggtcaggg aacgaagcag gcgcagggta
     1921 tcctgcggcc ggagcgcgac cagcgtcgcg tcgtcgatgt cggtggccgg cgcttcggtg
     1981 ccgttgggaa gcggaatccg gaagtcgaga cggttggccc ggcagtagtc ccgcacgatg
     2041 agcggggtga actgcaccga tcgcgccacc cacaacgctt cggtcgtggc aatggtgccg
     2101 ccgctcgtga tgtgagccca ggcctgccgc ggatcgtagc ccagcattgc cgcaatcatc
     2161 cgcccgactt cgatctcgag ggcgacggtg atcggggccg attcgctggt gacgttgttc
     2221 ggattgtaga ggagcccggc gaagtaaccc agcaccgccg ggaggctctg ctccgacacc
     2281 atgtgcgcgt tgtagcgcgg cgagtggagc gggaagtgga acttgagctc gctcagcgtg
     2341 gcgtcgagct gggtggtcag cgtgtcgagc cacgattcat gctcggggct ccggcgcttg
     2401 agccgcccca cgatccaggg gtcggccggg aagtagttgc gccgccagtg gacgtagtcc
     2461 tggaagatgt ggtcgaacat ctcggtccac acttgggcgt tttctgcccg gggcccgagg
     2521 aaccacgccg ttaaggggag atcgttgctc atattacccc caagcatcga gcgaagcccg
     2581 ggggcgggca aggtcttttt cgacctatga agggcttttc atgggggatt tagggagaag
     2641 ggagaagtga gaagtaagaa gtgagaagta tgaaggacga gggttccctc tcccttctcc
     2701 cttctcactt ctcacttctc actgcccgta cttgaacatc cggtaccaca tctccagatc
     2761 gccttccgag aacacttcca gctcagcgaa gatctcccgg gcaaactcca ccgcacccag
     2821 cccgctggcc gtgatgaggc cccggtcgcg caccgcgagc tggtcgacgt agtcgttctc
     2881 gaagatgtag tccggcacct gggccttgag atactcgagg ccattgctgg tgtgcgcccg
     2941 gccgtgcagc aggccggccc gggccacggc agtggtcgca gcgcagatcg ctgcgagcgg
     3001 cgcgccgttg gccatgcagc cttcgagcag cgataccagc cgggcgtcga gtcctgcggt
     3061 ctcccattga tcaccgccgg gcaggatgaa caggcgcacc tgctccggcg cgatctgttc
     3121 caccgtcaca tcgggcatca cggtgagccc gcccatggac cgtaccgggt gatgagacag
     3181 gccgaccgac accaccgggg ccgcaccggt ctggcggatc tgggccagcg cgtaggaagg
     3241 ttcccagtcg gcaaagccgt cgaagacgag aacgtggact gcgggttcgg acatgtcagt
     3301 tccgggttcc gatttcggag ttgcggaggc cggcgatctc ctgggccagc ttcgcaaacg
     3361 ccggaagatc cagactctgc ggcccatcgc tcagggcgtg ctcggggtcg gggtgcacct
     3421 cgatgatcac cccctgggcg ccggccgcga gcgaggcaag ggtgagtgcc gggacgatgg
     3481 cccggacccc ggccgcatga ctcgggtcgg cgatgaccgg aagatgggtg cgctcccgga
     3541 ccagcgccac cgcattgagg tcgagggtgt gtcgggtggc gcgctcgaag gtgcggatgc
     3601 cccgctcgca catgaccaca ttcggattgc cgtgcgacag cacatactcg gccgcgtgga
     3661 gccactcttc gatcgtggca ccggcgcccc gcttgaggag aatcggcttg ccgctccggc
     3721 ccgcggcccg gagcagggcg aagttctgca tgttccgggc gccgatctgg agcatgtcgg
     3781 cgtagcgggc caccagcggg acctcctccc agctcatcac ctcggtcacc accgggagtc
     3841 cggtacgctc ccgcgcctcg gccaggtact tgagtccccg tacgcccagc ccctggaagt
     3901 cgtagggcga cgttcggggc ttgaaggcgc cgccccgcag gatgtcggcg ccggcagccg
     3961 agacaccctc cgctgtctga tagatcatct cttcgctctc gaccgagcag ggcccggcga
     4021 tgatgaccgg ccggtcgccc ccgatctcga cgttgccgac catcacccga gtgccttcag
     4081 gatgctgccg ccgatcgaag agcgggagat cgggcttggg acggagatgc ggcggccgcg
     4141 gcatggtggg gccctgcggc atcgcgccct cgccctgcca cgacgagtag ctgcccagta
     4201 ccacgatccg cgaggcgagg gcctcgatcg actcgagcgc ttcggccagg cgcggttcac
     4261 cccgggtgcc ctcgacatcg aagtagaacc ggtaggtcca cggcgccgaa cgctccggcc
     4321 gcgactggag actggtaagg ttcacgcccc ggccggcaaa ggcctgaagc accgcagcca
     4381 gcatgccggg ccggtgatcg gtccagacga tgagcgaggt cttctggggg ccggcggatt
     4441 cctcggacgg ggtcgggacg tgggtgaagg tcaggaaccg ggtctggttg gtggggtcat
     4501 cctcgatgcg gtcctcgaag acgctgaggc cgtaggcgtc agccgcgtgg cgcgcgcaga
     4561 tcgccgcctg cgtcggatcc ttctcccggg cgacgatctc ggcgctgccc gctgtgtccc
     4621 acgcattcac cagcgtggcg ttgggcagat gacggctcag ccacacgcga cactggccca
     4681 gtgccaccgg gtgagaaagc acgtgggtga tctggctcag ctgcgcgccc gggacgccca
     4741 tgatgctgtg atgcaccggc aggaggatct cgcggctcag gtgcaggtcg ccttcgccga
     4801 acgcctcctg cagcagatcg taggtcggcg tgaccgagcc gaccagcgag ttctcgatgg
     4861 cgaggcagcc gccgtcggcc cgcccttccc gcaccgcggc caccacgtcg cccacctcac
     4921 gacagggcac cgtctcgagg tcgggccact gctgccgcgc ggcggcctca ctgaacgaac
     4981 cacgggttcc ctgaacggcg atgcgcatgg tgcacgtcct cgtcacagca ggtgaagccg
     5041 gaccggtctc ccaaaaaaga aaacgccccg ccattcggcg gggcgtcgag gtccgggtgt
     5101 cgggtcagcg atgacgcttg cccgcaccgg acggctcaga cgcgccgccg ggcgtggtaa
     5161 agaagaaaaa cgaaaagctt tggctcgatc gcatggctta tcgtaccgtg ggcaatgggg
     5221 ccggtcaagg cccggctact ttatgagcat gaattcaacc cccgaaccgc tgctcgcctg
     5281 ccccatcatg gcagagctgg tggcgaagca ccaagcgccg gccttcgagc agcagcgccc
     5341 ttttccggcg ctggtcgacg ccatcgtctc ccagcagatc tcgggcaagg cggccgcgag
     5401 catcctcgcg cggctcaaga cgctggtccc cattgccccg gccgccctgg ccgaggccga
     5461 tctgcgccgg ctccgccgcg ccgggctctc ccgcgccaag gcggtctatg tgcgggagct
     5521 ggcgcgcttc gcggtggagg gcgggctccg aggacttcgc cggctcccgg acgacgcggt
     5581 ggtcgagcgg ctgacgtcgg tgaagggcgt gggcgtctgg accgccgaga tgttcctgat
     5641 cttctccctc gggcgtcccg acgtctggcc ggtcggcgac ggcggagtgc agcgggccgc
     5701 gatgaacctc tacggcgtca ggaacgtgaa gcagctggcc cgcctcggcg accgcttccg
     5761 gccctaccgc acccacgccg cctggtactt ctggcgctcg ctcggctgac tactgcggcc
     5821 ggcggaaacc gccgcccggt ccagcctgcc gaaccgtctt cgcctcctcc gggagcgccg
     5881 cccactgctc ggcagtgagc acgccgtggg ccagctccag catctgcgac atcaggttgc
     5941 gcccagcctc gatccgtccc cggagcgcac tgaagagcac cgcaggatcg ggccgcggcc
     6001 ccgccgcttc gatctccttc tgaatggcgt ggcccagtga atcgcggctg gtgacgaagc
     6061 gctgactgat ctcgttgagc ttcgccgtct ggtcgtcgtt gatcttgatc tggaaactgt
     6121 attccaggat cttcgccacc ggatcgggca tgatgcgcgc cagccggttt tcgaaccgcg
     6181 cggccgagtc gcccggcggt gctcccgccg cgccaggggc cgcccccgca ccggccggcc
     6241 catcggggcg ggcgccgccc ggtccgaatc cgccgcggtc aaacccgccg ccgccaaacc
     6301 ctccgcgcgg accgccacca cctccggggg caccgcctcc tccgaagaac ccggtggtgc
     6361 caagggcgaa ccgcagctgc accccgatct ggaatggctg ccgcagcgcc tgggcgctgc
     6421 gcacgtcacc gaagcgctga ttcacctgat aggtgtactg ctgtgccacc ggatcgaagc
     6481 cgcgcacgat cagcagcgtg gcgtcgggcc ggtagctcgc tccccagcca tgcaggtcgt
     6541 tgccgtggaa gagctggtcc agtcctccca gcagattgga agtgaccatc gagagggtga
     6601 gccgctggtc gaggccccag aagctgggac gccagttgag ctgaatatcc gaggtgatct
     6661 gccacggtcc
//
LOCUS       DATIFF010000044         1740 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_927937, whole genome shotgun sequence.
ACCESSION   DATIFF010000044 DATIFF010000000
VERSION     DATIFF010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_927937"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..671)
                     /locus_tag="VLD58_00715"
     CDS             complement(<1..671)
                     /locus_tag="VLD58_00715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0044781 - bacterial-type flagellum
                     organization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliO"
                     /protein_id="HSB52840.1"
                     /translation="MLGALGSLLVTLGFLGLALWLVKRWVPGARLPGSGGIPLEVLRR
                     VSTGPKQGVALLRVGERVLVLSVSDQGSQLLTELDGADREQALDSGAGLVSVKPSWTP
                     PRVSRKMAGVFKAIPFLMLLLAVLPQRAAAATVPAPALSLPLAPVLALQGAVRAPTAP
                     KVTVTIGQGSEQLQLSGAVGIVVFMGAMTLLPAIFLLMTSFTRILIVLHFVRTAIGTQ
                     TAPPG"
     gene            complement(671..1075)
                     /gene="fliN"
                     /locus_tag="VLD58_00720"
     CDS             complement(671..1075)
                     /gene="fliN"
                     /locus_tag="VLD58_00720"
                     /inference="COORDINATES: protein motif:HMM:TIGR02480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HSB52841.1"
                     /translation="MDQNEIDRMMGKGGSGAAPAPAPKSHDLSELPAGGGRATMAPGT
                     MVGSLDTLLDVSLPVAIEFGRTHMTVQEVLELGSGSVIQLDRMVGEPIDIYISDRKLA
                     EGEVVVIGEHFGVRITRIVAGNEPVAGSRESA"
     gene            complement(1079..>1740)
                     /locus_tag="VLD58_00725"
     CDS             complement(1079..>1740)
                     /locus_tag="VLD58_00725"
                     /inference="COORDINATES: protein motif:HMM:NF014235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FliM/FliN family flagellar motor switch protein"
                     /protein_id="HSB52842.1"
                     /translation="LSYYLIDRLFGGPGEAPDLKRPLTQLERTVVRGVADKVWGLAAE
                     AWADHLTFAPSYVGFESSPDALQIANREDNVLVANIEVKSGGFAGLITMCVPLLSLET
                     FLQEKPTRHFHNVKSSPAEREQTRRMIEGLLRISQLELKARFPLFQLKARDVGKLEVG
                     QVIHTGHPYDVPVELYVRGQRRFVGTLGQSRKYVGLRITQQLHSQRPDVTPLSSRGRL
                     V"
BASE COUNT          287 a          594 c          613 g          246 t
ORIGIN      
        1 tggccggggg gagcggtctg ggtcccgatc gcggtccgca cgaagtgcag cacgatcagg
       61 atccgggtga agctggtcat cagcaggaag atcgccggca ggagcgtcat cgctcccatg
      121 aacaccacga tgccgacggc gccggagagc tggagctgtt cgctcccctg cccgatcgtc
      181 accgtcacct tgggcgccgt gggggcccgg accgcgccct ggagcgccag caccggtgcg
      241 agcggcagcg aaagggccgg cgcggggacg gtggccgcgg cggcgcgctg cggcagcacc
      301 gccaggagga gcatcaggaa cggaatcgcc ttgaagacac cggccatctt ccggctcacc
      361 cgcggcggtg tccagctcgg cttcacgctg accagcccgg caccgctgtc gagcgcctgt
      421 tcccggtcgg ccccgtcgag ctcggtgagg agctgcgagc cctggtcgct gaccgacagc
      481 accagcaccc gctcacccac gcggaggagg gccacgccct gcttggggcc ggtggaaacc
      541 cggcggagga cttcgagggg aatgccgccg cttcccggca ggcgggcccc gggcacccag
      601 cgcttcacca gccagagcgc cagacccagg aagccgaggg taacgagcag cgaacccaga
      661 gcgccgagca tcaggccgac tcgcgggagc cggcgaccgg ctcgttgccg gccacgatcc
      721 gggtgatacg gacgccgaag tgctcgccga tcacgaccac ttcgccctcg gcgagcttcc
      781 ggtcggagat gtagatgtcg atcggctcgc ccaccatccg gtcgagctgg atcaccgagc
      841 cgctgcccag ctccagcact tcctgcaccg tcatgtgggt ccggccgaac tcgatcgcca
      901 ccggcagtga gacatcgagc agggtatcga gcgacccgac catggtcccg ggagccatcg
      961 tggcccggcc gccacccgca ggcagctcgg agagatcgtg ggacttgggt gccggcgccg
     1021 gcgcggcgcc gctgccgccc ttgcccatca tgcggtcaat ctcgttctga tccatcggtc
     1081 agaccaacct tccgcgggaa gacaggggtg tgacatccgg ccgctgggag tgaagctgct
     1141 gggtgatgcg aagtccgacg tacttgcggc tctgccccag cgtcccgaca aagcggcgct
     1201 ggccccgcac atacagctcg accggcacat cgtagggatg accggtgtga atgacctggc
     1261 cgacctcgag cttgccgacg tcgcgcgcct tgagctggaa gagggggaaa cgggccttga
     1321 gctcgagctg ggagatccgg aggagccctt cgatcatccg gcgggtctgt tcccgctccg
     1381 ccggcgagga tttcacgttg tggaagtgcc gggtgggctt ttcctggagg aacgtctcca
     1441 gcgacagcag gggcacgcac atggtgatga gcccggcgaa cccgcccgac ttcacctcga
     1501 tgttggccac cagcacgttg tcttcccggt tggcgatctg gagcgcgtcg ggcgacgact
     1561 cgaagccgac gtacgacggc gcgaaggtca ggtgatcggc ccaggcctcg gccgcgaggc
     1621 cccagacctt gtcggcgacc ccgcgcacca cggtgcgctc cagctgggtg agcgggcgct
     1681 tgagatcggg cgcctcgccc ggcccgccga agagccggtc gatcaggtag taggagaggt
//
LOCUS       DATIFF010000045         1396 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_466676, whole genome shotgun sequence.
ACCESSION   DATIFF010000045 DATIFF010000000
VERSION     DATIFF010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1396
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_466676"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..904)
                     /locus_tag="VLD58_00730"
     CDS             complement(<1..904)
                     /locus_tag="VLD58_00730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium chelatase"
                     /protein_id="HSB52843.1"
                     /translation="MTYKHIETSEPRTFGDLRNSRWAEPPFRGRTVRDEIRANLLTRL
                     ESGMPLFEGIVGYEDTILPQLVNALLARHHFILLGLRGQAKSRILRELTGLLDERIPV
                     LAGSEVNDDPFAPISKYAREVLAECGDAAPIGWVRRDQRYVEKLATPDVTIADLIGDV
                     DPIKAARGGHLLSDELTMHFGLLPRANRGIFAINELPDLSGKVQVGLFNIMQEGDVQI
                     KGYPVRLPLDVLLAFTANPEDYTARGKIITPLKDRIGSEIITHYPRTVQLGMEITAQE
                     AWIRRGGRQLDIPDFVLETIERVAF"
     gene            1076..1279
                     /locus_tag="VLD58_00735"
     CDS             1076..1279
                     /locus_tag="VLD58_00735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52844.1"
                     /translation="MKKLLMMSALLVLAACGGKKAEAPAGETTGEMAPAAAPADTGMG
                     MAHDSSAMAPTSGTMMARDSAKK"
BASE COUNT          206 a          470 c          488 g          232 t
ORIGIN      
        1 cgaacgccac ccgctcgatc gtctccagca cgaagtcggg gatatccagc tgccggccgc
       61 cccggcggat ccacgcctcc tgcgcggtga tctccatgcc gagctgcacc gtgcgggggt
      121 agtgggtgat gatctccgag ccgatccggt ccttgagtgg ggtgatgatc ttgccccgcg
      181 cggtgtagtc ctccggattg gcggtgaacg ccagcaggac gtcgagcggc aggcggaccg
      241 gatacccttt gatctggacg tcgccttcct gcatgatgtt gaacagtccc acctgcacct
      301 tgccgctcag atcgggcagc tcgttgatcg cgaagatgcc ccggttggcc cgggggagca
      361 gcccgaagtg catggtcagc tcgtcggaca ggagatggcc gccgcgggcc gccttgatcg
      421 gatcgacgtc gccgatcagg tcggcgatgg tgacgtcggg cgtggccagc ttctcgacgt
      481 agcgctggtc gcgccggacc cacccgatcg gcgccgcgtc gccgcactcg gccagcacct
      541 cgcgggcgta cttcgagatc ggggcgaacg ggtcgtcgtt cacctcgctg cccgcgagga
      601 cggggatccg ctcgtcgagc aggccggtga gctcgcggag gatccggctc ttggcctggc
      661 cccggaggcc gagcagaatg aagtggtgcc gcgccagcaa tgcgttcacc agctgcggga
      721 ggatggtgtc ctcgtacccc acgatgccct cgaacagcgg catccccgac tccagccggg
      781 tgagcaggtt ggcgcggatc tcgtcgcgga cggtgcggcc gcggaacggc ggctctgccc
      841 agcggctgtt ccgcaggtcg ccgaaggtgc ggggctcgga tgtctcaatg tgtttgtaag
      901 tcattgctcc acaacgtttt cagattgtag ttggggcggc gtcgggcacc gcaccggggc
      961 ggaccggctt gacaatcgag gccgcccgct tagcttcgcc ccccgtgcat ccggcgaacg
     1021 gtgcaggcgt gcgaccccga acttggctgg ccaacccatc cgtaaggagt atctgatgaa
     1081 gaagctgctc atgatgtcgg cgctcctcgt cctcgccgcc tgtggcggga agaaggccga
     1141 ggcgccggct ggcgagacca ccggcgagat ggcccccgcc gcggctcccg ccgataccgg
     1201 catgggcatg gcccacgaca gcagcgccat ggccccgacg tccggcacga tgatggcccg
     1261 ggacagcgcc aagaagtaag ctcccgcggt cgctctgtcc ggccgggcct cggagtaccg
     1321 gggcccggct gttttttcct cagccgtcga gctcgtcgcc gccgaacggc aggccggtca
     1381 ccgtcgccgg gcgtcc
//
LOCUS       DATIFF010000046         1019 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_5165, whole genome shotgun sequence.
ACCESSION   DATIFF010000046 DATIFF010000000
VERSION     DATIFF010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5165"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..555)
                     /locus_tag="VLD58_00740"
     CDS             complement(<1..555)
                     /locus_tag="VLD58_00740"
                     /inference="COORDINATES: protein motif:HMM:NF012879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HSB52845.1"
                     /translation="MIAAFLLAFAIQAPSTARDSLLPIDPAVTTGRLPNGLRYYIRVN
                     HRPAKRAELRLVVNAGSVLEDADQRGMAHFVEHMAFNGTVHFRKQELVDYIESIGMRF
                     GADLNAYTSFDETVYQLQVPTDSAHIVQRGFQILEDWAHGVTFDTTEIRKERGVVMEE
                     WRLGRGAGPRMFDQQLPVLFRGSRY"
     gene            complement(617..>1019)
                     /locus_tag="VLD58_00745"
     CDS             complement(617..>1019)
                     /locus_tag="VLD58_00745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52846.1"
                     /translation="TIPVRRLLEHLDRGKDLESFLAGNPDLRREVALGALALGLEALL
                     RDVPLEVGPAQRSLLPRVDADGVIVNADELSVGQVVGKRVRCPACRMLVFRSWPEGWD
                     AHVATRCRGTQGGGPEARKAEFKRRYGQLFR"
BASE COUNT          169 a          357 c          350 g          143 t
ORIGIN      
        1 gtaacgggag ccccggaaca ggaccggaag ctgctggtcg aacatccgcg gccccgcccc
       61 ccggcccagc cgccactcct ccatcaccac cccccgctcc ttccggatct cggtcgtgtc
      121 gaaggtcacg ccgtgggccc agtcttccag gatctggaag ccccgctgga cgatgtgggc
      181 gctgtcggtg ggcacctgga gctggtagac cgtctcgtcg aacgaagtgt acgcgttgag
      241 atcggccccg aatcgcatgc cgatcgattc gatgtagtcg accagctcct gtttccggaa
      301 atggacggtg ccgttgaagg ccatgtgctc gacgaagtgc gccatgccgc gctggtcggc
      361 atcttccagc acggagccgg cgttgacgac cagccggagc tcggcccgct tggcgggccg
      421 gtgattcacg cggatgtagt agcggagccc gttgggcagc cggcccgtcg tgaccgcggg
      481 gtcgatggga agcaggctgt cccgcgccgt ggaaggcgcc tggatggcga acgcaaggag
      541 aaaagccgca atcacggatc gatcccgccg gtcgagaaga gtggaatcta cgaaggtcac
      601 cccgcgcgag gcggcgtcag cggaagagct gaccgtagcg gcgcttgaac tccgccttcc
      661 gcgcctccgg gccgccgccc tgcgtgcccc ggcagcgggt cgcgacatgg gcatcccaac
      721 cctcgggcca ggagcggaag accagcatcc ggcaggcggg acagcggacc cgtttgccga
      781 cgacctgccc caccgagagc tcgtcggcgt tcacgatcac gccatcggcg tcgacccgcg
      841 gcagcaggga gcgctgtgcg ggcccgacct cgagcggcac gtcgcggagc agcgcctcga
      901 ggcccagcgc cagcgcgccc agcgccacct cccggcgcag gtcgggattc ccggccagga
      961 acgattcgag atccttcccc cgatccaggt gctcgagcag ccggcgcacc gggatcgtg
//
LOCUS       DATIFF010000047         1185 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_5190, whole genome shotgun sequence.
ACCESSION   DATIFF010000047 DATIFF010000000
VERSION     DATIFF010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5190"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..404
                     /locus_tag="VLD58_00750"
     CDS             <1..404
                     /locus_tag="VLD58_00750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52847.1"
                     /translation="PGWAGWGQDVNEDSVVLLVEYGRFQALFAGDAGFPAEADLRGRV
                     GPVDLLKVGHHGSRGSTGEEWLDSLRPAVAVISVGRNDYGHPAPATLARLTAHRVRLW
                     RTDRDGTVSVTTDGGQMRVQGARETFDLDLR"
     gene            442..>1185
                     /locus_tag="VLD58_00755"
     CDS             442..>1185
                     /locus_tag="VLD58_00755"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HSB52848.1"
                     /translation="MQTSVTTIERFIFDQEHRYPEATGELSNLLYDIALAAKIIAAAI
                     RRAGLVNILGTANVRNVQGEEQQKLDVIANETIKNCLNHTGRVCVMGSEEDEDIIPVP
                     PEYPVGKYAILFDPLDGSSNIDVNSAVGTIFSIYRRVSMEGRGTASDVLQPGCKQVAA
                     GYVMYGSSTMLVYTTGQGAHGFTLDPTIGEFLLSHPRIVTPRVGKYYSVNESNFGRWD
                     KATQAAVRGLKGEDGELMKPKNSRYIGSLV"
BASE COUNT          203 a          393 c          419 g          170 t
ORIGIN      
        1 cgcccggctg ggccggctgg gggcaggatg tgaacgagga ctcggtggtc ctgctggtgg
       61 aatacggccg gttccaggcc ctgttcgccg gcgacgccgg gtttcccgcg gaggcggatt
      121 tgcggggccg ggtcggcccc gtggacctgc tcaaggtggg ccatcacggc agccggggca
      181 gcaccgggga agaatggctc gattccctcc ggccggcggt cgcggtcatc tcggtcggcc
      241 ggaacgacta cggccacccg gcgccggcga cgctcgcacg gctcacggcc caccgggtcc
      301 ggctctggcg gaccgaccgc gacggcaccg tgagcgtgac caccgacggg ggccagatgc
      361 gggtgcaggg cgcgcgggaa acgttcgacc tcgacctgcg gtgagccgag gcgacgacca
      421 tccttcttgt cagggggttt cgtgcagacg tccgtcacca cgatcgagcg gttcatcttc
      481 gaccaggagc accgctaccc ggaggccacc ggcgagctgt ccaacctgct ctacgacatc
      541 gcgctggcgg cgaagatcat cgcggcggcg atccggcggg cggggctggt caacatcctc
      601 ggcacggcca acgtgcggaa cgtccagggc gaggagcaac agaagctcga cgtcatcgcc
      661 aacgagacca tcaagaactg tctcaaccat accgggcggg tctgcgtgat gggctccgag
      721 gaggacgagg acatcatccc cgtcccgccc gagtatccgg tcggaaagta cgccatcctc
      781 ttcgacccgc tcgacggctc ctccaacatc gacgtcaact ccgcggtcgg caccatcttc
      841 agcatctatc gccgggtgag catggagggg cggggcaccg cctcggacgt gctgcagccg
      901 ggctgcaagc aggtggccgc gggctacgtg atgtacggct ccagcacgat gctggtgtac
      961 accaccggcc agggggcgca cggcttcacc ctcgacccga cgatcggcga gttcctcctc
     1021 tcgcacccgc gcatcgtgac cccgcgagtc gggaagtact acagcgtgaa cgagagcaac
     1081 ttcggccggt gggacaaggc gacgcaggcg gcggtgcgcg ggctcaaggg tgaagacggc
     1141 gagctgatga agccgaagaa cagccgctat atcggctcgc tggtg
//
LOCUS       DATIFF010000048         4675 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_928112, whole genome shotgun sequence.
ACCESSION   DATIFF010000048 DATIFF010000000
VERSION     DATIFF010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4675)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4675)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4675
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_928112"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..434)
                     /locus_tag="VLD58_00760"
     CDS             complement(<1..434)
                     /locus_tag="VLD58_00760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52849.1"
                     /translation="MRTPLLVLSLLVLVQPTLSAQALTPATRLARAVNPTAYRAHLQF
                     LADDALEGRAPGTRGGELAAKYIAAQFQRLGLEPAGDSGSFFHRVPIIALTPSPTLSI
                     TGASRTPLQYRDDYVLWSMRNEEKTSFSAQTAFVGYGIVAPE"
     gene            complement(479..1384)
                     /locus_tag="VLD58_00765"
     CDS             complement(479..1384)
                     /locus_tag="VLD58_00765"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSB52850.1"
                     /translation="MSGRIGRLARRIALALGAAVLLWAGFGSPRRSKAPFHAQWVDAD
                     GVRSRALLTGRGDTTLVFLHGYGESLLSWRALLEQFTRRYRVVALDLPGFGQSRSPGF
                     GYSYPDYAEWLDSVLAKETRGPLVLVGHSMGGELAAGYTIEHPDRVVAAVLIAPAGAG
                     INPLFADSGSIASPAAEWVTAAFAFVVPPEDTTWLREPRGVDTLRAAIDSSRREAVPA
                     VLRRFDFAALEHRYADLKQPVLLIWGDHDPTIPIEIGQRIAAVLPCRRFVRLFTLHRP
                     HQTLPDTVAAEMRRFLQGSATRCEQ"
     gene            complement(1386..2261)
                     /locus_tag="VLD58_00770"
     CDS             complement(1386..2261)
                     /locus_tag="VLD58_00770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52851.1"
                     /translation="MRLASFFLLLAVPAAAQTLAPRPVQAVLTGRFQEHDLTESSGVA
                     RISSVPRVIFTLNDSGNPPEIFATDSSGRAIGRWLVPGASNRDWESLSIGPCPAGSCF
                     YIGDTGDNAERRGQVVIYRVTIPALATFRGAADHTPTRLDSAVVRYPDAPHDAEAAWV
                     ADAGDYFIVTKGRSGGVRLFRVPASAFGRNEVVTAVLVQQLPIDPLPAFGRLVTDAAR
                     SPDGRQVVIRTYTELYFFPLLGDARLGPVTRSCNLAGLEPQGEAVTWLDDRRLLLTSE
                     ASIGAGVIHIVSCDG"
     gene            complement(2312..3550)
                     /locus_tag="VLD58_00775"
     CDS             complement(2312..3550)
                     /locus_tag="VLD58_00775"
                     /inference="COORDINATES: protein motif:HMM:NF024598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative glycoside hydrolase"
                     /protein_id="HSB52852.1"
                     /translation="MRHATFVALGLIAASTLSAQTPVKAGWGDELAPVAAPERLLAIG
                     PRQSEPLDWPAPPLRQPPDAVRALYVNAWAFGGSRFRDLVRLADSTEVNSFVIDVKDD
                     TGYLTYKSEVPTAIEIGANAQLRARDAADRLRLLHAHGIHPIARIVVAKDPLLAAHKA
                     AWSVQDRDGGLWRDRLNFAWVDAYNDSVWVYASQLAAEAVKLGFSEVQFDYVRFPDEP
                     KARMSRAIFPARRNNETVRAAVARHLALLRDRVKPLNVPYTIDVFGMTTNVEVDLGIG
                     QVWEDLVSTADVVLPMVYPSHYYHAMYGVSHPNSEPYKMVKNALADGLRRSERLTGPK
                     AQIRPYLQAFTLGKPRYTPEHVRDQIRAAGDVGIHSWVLWNPRSAYDPRIFQPKGGAP
                     ATRLAAARVAAVDPTPRWGR"
     gene            complement(3644..>4675)
                     /locus_tag="VLD58_00780"
     CDS             complement(3644..>4675)
                     /locus_tag="VLD58_00780"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSB52853.1"
                     /translation="GGYGSTNYGRCPDIAVPGTGPCGVAGALQGGIGARIGLTRTLLM
                     RYDVTANRSVTTLKFSNFTMQAGLSLMLGASASDSDQDGVPDSRDRCANTARGTTVDA
                     RGCTLDADKDGVGDRFDRCPGTPAGQPVDISGCPSDGDRDGVPDGMDQCSDTPRNAQV
                     DARGCPVPVNPPAVTLPAPQPKVEAPAPPQPQPQPQPQPQPRDTVVARPLPPPAPKPT
                     PTPAPARTADRTWVVPGSVWTYRAAILDPSAFPILDSVATALKADPDARIEVVGHAYD
                     RLIPADDVRLSQYRAEAVRSYLTFKGVPVSRITAVGRGSGPLIDRGTSEEARARNRRV
                     EIRVTHPGK"
BASE COUNT          744 a         1494 c         1728 g          709 t
ORIGIN      
        1 cactcgggtg ccacgatgcc gtagccgacg aacgcggtct gggccgagaa ggatgtcttc
       61 tcctcgttcc gcatcgacca gaggacgtag tcgtcgcggt actggagagg ggtcctcgag
      121 gcgccggtga tgctgagcgt gggcgagggc gtgagcgcga tgatcggtac ccgatggaag
      181 aagctcccgc tgtccccggc cggctcgagg ccgagccgct ggaactgggc ggcgatgtac
      241 ttggctgcga gttctcctcc tcgagtcccc ggcgcccgcc cttccagcgc gtcatcggcc
      301 aggaactgga gatgagcccg gtaggccgtg ggattcaccg cccgcgcaag ccgggtggca
      361 ggggtgagcg cctgagccga cagcgtgggc tggacgagaa ccaggagaga gaggacaagt
      421 agtggggttc gcatgcgatt cgtgggttgg cgggctgggt gactggtcgg ctgggaatct
      481 actgctcgca gcgggtggcg ctcccctgca gaaaccggcg catttcggcg gcgaccgtgt
      541 ccggcagggt ctggtgagga cggtgcagag tgaagagtcg gacgaagcgg cggcagggga
      601 gcaccgcggc gatccgctgg ccgatctcga tgggtatggt ggggtcatga tcgccccaga
      661 tgagcagcac cggctgcttg agatcggcgt agcgatgctc cagtgccgcg aagtcgaacc
      721 gtcgcagcac cgccggcacc gcctcccgtc tgctggagtc gatcgcggcc cgcaaggtgt
      781 cgacgccgcg cggctcgcgg agccaggtgg tgtcctcggg cggaaccacg aacgcaaagg
      841 cggccgtcac ccattcggcg gcgggtgagg caatgctgcc gctgtcggca aagagcgggt
      901 tgattcccgc gccggcgggc gcgatgagca ccgctgcgac tacccgatcg ggatgctcga
      961 tcgtgtatcc cgccgcgagt tcgcccccca tcgagtgacc caccagcacc agcggccccc
     1021 tcgtctcctt tgccagcacc gagtcgagcc actcggcata gtcgggatag ctgtatccga
     1081 aaccaggact ccgcgactgc ccgaagcccg gcaggtcgag cgccacaacc cggtagcggc
     1141 gggtgaactg ctcgagcagc gcccgccagg agagaagcga ctcaccgtag ccgtggagaa
     1201 agaccagggt ggtgtctccc cggccggtca ggagcgcccg gctccgcact ccatcggcat
     1261 cgacccactg ggcgtgaaag ggggccttgc tgcgccgggg cgaaccgaat ccggcccaga
     1321 gcagtaccgc tgctccgagc gccagggcaa tgcgccgcgc cagccggccg atgcgcccac
     1381 tcatgtcacc cgtcacagct cacgatgtga atgacgccgg caccgatgct cgcctcgctg
     1441 gtcagaagca ggcggcggtc atccagccag gtgaccgcct caccctgcgg ctcgaggccg
     1501 gccaggttgc agctcctcgt cacaggcccg aggcgggcgt cgcccaggag gggaaagaaa
     1561 tagagctcgg tgtaggtgcg gatcaccacc tgccggccat cgggagaacg ggccgcgtcg
     1621 gtcaccagcc ggccgaacgc cgggagcgga tcgatcggga gctgctgcac cagcaccgcg
     1681 gtgacgacct cgttccttcc aaacgccgaa gccgggaccc ggaacaaccg caccccaccg
     1741 ctccgacctt tggtgacgat gaagtagtcc cccgcgtcag ccacccaggc ggcctcggca
     1801 tcgtggggtg cgtcgggata gcggaccacg gcggagtcga gcctggtggg agtgtggtcg
     1861 gcggcgccgc gaaacgtggc aagggccgga atcgtcaccc gatagatcac gacctggccc
     1921 cgccgctccg cattgtcgcc ggtatccccg atatagaagc agctcccggc ggggcagggg
     1981 ccgatcgaga ggctttccca gtcacggttg gacgcacccg gaaccagcca ccggccaatg
     2041 gcccggccgc tcgaatcggt ggcgaagatc tcgggagggt tgccggaatc gttgagggtg
     2101 aagatcaccc tcggtacgct ggaaatccgg gctacgccgc tgctttcagt gaggtcatgc
     2161 tcctggaagc ggccggtgag gaccgcctga accgggcggg gagcaagggt ctgggcagcg
     2221 gcagggacgg cgagcagcag aaagaaagac gccaggcgca taccccaatg gtagcatgcc
     2281 ctggcgccgg cggtcggtca gcggagctgg atcagcggcc ccagcgcggg gtcggatcga
     2341 cggcggccac ccgcgcggcg gccagccggg tcgcgggggc tccacccttc ggctggaaga
     2401 tccgggggtc ataggccgag cggggattcc acagcaccca gctgtggatc cccacatcgc
     2461 ctgcggcgcg gatctggtcg cgcacatgct ccggggtgta tcgcggcttg cccagggtga
     2521 aggcctggag atacgggcgg atctgggcct tgggcccggt gaggcgctcg gaacgccgga
     2581 ggccgtcggc cagggcgttc ttgaccatct tgtagggctc gctgttcgga tggctcacgc
     2641 cgtacatcgc gtggtagtag tggctggggt agaccatcgg cagcaccacg tcggcggtgc
     2701 tcaccaggtc ttcccagacc tgcccgatgc ccagatccac ctcgacgttg gtggtcatgc
     2761 cgaagacgtc gatcgtgtag gggacgttga gcggcttgac ccggtcgcgg agcagcgcca
     2821 ggtggcgggc caccgcggcg cggaccgttt cgttgttgcg gcgggccggg aagatcgcgc
     2881 gcgacatccg ggccttgggc tcatcgggga agcggacgta gtcgaactgc acctcgctga
     2941 agccgagctt caccgcctcg gccgcgagct gcgaagcgta gacccagacg gaatcgttgt
     3001 aggcatcgac ccaggcgaaa ttgagccggt cgcgccagag gccgccgtcc ctgtcctgca
     3061 ccgaccaggc ggccttgtga gccgcgagca ggggatcctt ggccaccacg atgcgggcga
     3121 tgggatggat gccgtgggcg tggaggagcc gcagccggtc cgcggcatcg cgggcccgga
     3181 gctgggcgtt ggcgccgatc tcgatcgcgg tcggaacctc ggacttgtag gtgaggtacc
     3241 cggtgtcgtc cttgacgtcg atgacgaagc tgttgacctc ggtcgaatcg gccaggcgga
     3301 ccaggtcgcg gaaccggctg ccgccgaatg cccaggcgtt gacgtaaagc gcgcgtaccg
     3361 cgtcgggcgg ctggcggagc gggggcgccg gccagtccag cggttcggac tggcgcgggc
     3421 cgatcgccag gaggcgctcg ggggcggcga ccggcgccaa ctcgtcgccc cacccggctt
     3481 tgaccggagt ctgggcgctg agagtgctgg cggcgatcag gcctaacgcg acaaacgttg
     3541 cgtggcgcat gtataggttc tcggcatttc cggtcgaagt ctggaacttc ggagtggtcc
     3601 agccctgccc ccctactcaa acgcaaggag catgcgctcc tgctcacttc ccggggtggg
     3661 taaccctgat ctcgacccgt cggttccggg cccgagcctc ctcgctcgtt ccgcggtcga
     3721 taagtggacc ggaaccacgc cccacagccg tgattcggct cactggcaca cctttgaacg
     3781 tcagataact acgcactgcc tcggcgcgat actgcgacag gcggacgtca tcggcgggga
     3841 tgagccggtc gtaggcgtgg ccgaccacct cgatcctggc gtcggggtcc gccttgaggg
     3901 cggtggccac cgaatcgaga atcgggaagg ccgagggatc gaggatcgcc gcccggtagg
     3961 tccagactga cccggggact acccaggtgc ggtctgccgt gcgggctggg gcaggtgtgg
     4021 gggtcggttt cggcgccggg ggtggcagag gccgggccac gacggtgtcc ctgggctggg
     4081 gttgaggctg gggttgaggc tggggttgag gcggggcagg tgcctccact ttgggttgag
     4141 gggcggggag cgtgaccgcg ggaggattca ccggcaccgg gcatccgcgg gcatctacct
     4201 gggcgttgcg gggcgtgtca ctgcactgat ccatcccgtc tggcacacca tcgcggtcgc
     4261 catcgctggg gcagccggag atgtcgaccg gctgaccggc cggggtgccg gggcagcgat
     4321 cgaaccggtc gcccacgcca tccttgtcgg cgtcgagggt gcagccgcgc gcgtcgacgg
     4381 tggtaccgcg ggcggtgttg gcgcagcggt cccgggagtc cgggacgcca tcctgatcgc
     4441 tgtcgctggc gctcgccccg agcatcaggc tcagccccgc ctgcatggtg aaattcgaga
     4501 acttgagggt ggtgacgctg cggttggcgg tgacatcgta gcgcatgagc aatgtgcggg
     4561 tgagcccgat ccgcgcgccg atcccaccct gcagagcgcc ggccaccccg cagggcccgg
     4621 tgccgggcac cgcgatgtcg gggcagcggc cgtagttcgt gctgccgtag ccgcc
//
LOCUS       DATIFF010000049         1846 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2159124, whole genome shotgun sequence.
ACCESSION   DATIFF010000049 DATIFF010000000
VERSION     DATIFF010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1846
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2159124"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            79..>1846
                     /locus_tag="VLD58_00785"
     CDS             79..>1846
                     /locus_tag="VLD58_00785"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB52854.1"
                     /translation="MMLRVLRQAPAYSAAILGMLTLSTVVLIGTAVQVDAALFRPPEF
                     PGVDRLVIVYNLESAPGRPDRRVRWSYRGVSLLRQLAAPSLEVANYSPSLLPLTLESE
                     AEAVTAEIVSPDYFALLEAAPIIGRGFRPDEDSVPGAGPVTVLSHGLWQRRFGGDSGI
                     VGRQVRVSGTQLTVIGVMGPRFHGLSGNAALWVPAAMAPTLSYPEYLTSDQHFISAVG
                     RLRPGVGLQQADRQLELVGQAITSQLDSGTTGATVRTSAIPLNQARINGSTRRSLLLL
                     LAGASLLHLLAIANVVNLMLARAAARQREAAILVAIGGSTWQRLRYFATEGMAFSFLA
                     TGIGLVIAWAATPLLAIPADAWGPRSLYGSLATFSTVEFGVRELVLALLLGTGTALLV
                     TWAPVVALLHPSLGAMQRDGGGISRGGATLRRLLLRGVIVAVEAGLAMVLLVAGGLLI
                     ESYRRMRATDLGIEPDHVLSFWIRPSESRVPTDQAPAFVARVLSAIEALPGVEAATVD
                     GGGPLSGSARSTLIIAGHPPARPEDAPPILRHYVGPNHFRVLGVPLLRGRAFDQRDRA
                     GSPRVVVISESAARRFWPNSDPI"
BASE COUNT          231 a          660 c          634 g          321 t
ORIGIN      
        1 tggggtgtct tccggcccgg gggttgattc ccggggacct ctggtaaacc ctggccgccc
       61 gagcggcatc ccagcggcat gatgctccgg gttctgcgcc aggcacctgc ctactccgcc
      121 gccatcctgg ggatgctgac actcagcacc gtggtcctga tcgggaccgc ggtgcaggtg
      181 gatgctgcgt tgttccggcc tcccgaattt cccggcgtgg accggctggt gatcgtctac
      241 aacctcgagt cggctccggg caggccggac cgcagggtgc ggtggtcgta tcgcggggtc
      301 tcgctcctgc gccagctggc cgcgccgagt ctcgaagtcg cgaactactc gccgagcctc
      361 cttcccctca cactcgagtc ggaggccgaa gcggtcaccg ccgagattgt gtcacccgac
      421 tacttcgctc tcctcgaggc ggctcccatc atcggccgcg gcttccgccc cgacgaggac
      481 tcggtgccgg gcgccgggcc ggtcacggtc ctgagtcatg gcctctggca gcgccgcttc
      541 ggcggtgaca gcggcatcgt gggccggcag gtccgggtga gcggcaccca gctcacggtc
      601 atcggcgtga tggggccccg gttccacgga ctgagcggga atgccgcgct ctgggtgccg
      661 gcggcgatgg cgccgaccct gagctacccc gaatatctga cctcggacca gcacttcatc
      721 agcgccgtag gccgactgcg tcccggagtg gggctgcagc aggcagaccg gcagctggaa
      781 ctggtcggcc aggcgatcac ctcccaactc gactccggga ccacgggcgc gaccgtccgc
      841 accagcgcga ttccactgaa tcaggcccgc atcaacggct ccacccggcg ctcgctgctt
      901 ctgctgttgg ccggcgcgtc gctgctccac ctgctcgcca tcgcgaatgt ggtgaatctc
      961 atgctggcgc gggccgcggc gcggcagcgc gaggccgcga tcctcgtcgc catcggcggg
     1021 tccacctggc agcgtctccg atactttgcc acggagggga tggccttctc cttcctggcc
     1081 accgggatcg ggctggtcat cgcctgggcc gcgactccac tgctcgcgat cccggctgat
     1141 gcctgggggc cccggagcct gtacggcagc ctcgcgactt tctccacggt cgaattcggc
     1201 gtacgcgagc tggtgctcgc cctcctgctg ggaacgggta cggcgctcct cgtgacctgg
     1261 gctccggtcg tggcgctcct ccacccgagc cttggcgcca tgcagcgcga tgggggcggg
     1321 atctcgcggg gaggggcgac cctccgccgc ctcttgctcc ggggcgtgat cgtggccgtc
     1381 gaagccggcc tcgccatggt cctcctggtg gccgggggac ttctgatcga gagctaccgt
     1441 cggatgcgcg ccacggacct cggtatcgag ccggatcatg tgctctcctt ctggatcagg
     1501 ccatccgagt cccgggtccc gaccgatcag gcgccggcgt tcgtggcccg cgtcctttcg
     1561 gctatcgagg cgctcccggg tgtcgaggcg gccacggtgg atggcggcgg tccgctgagc
     1621 ggctcggcac ggagcacact gatcatcgcg gggcatcccc ccgcgcggcc ggaggacgct
     1681 ccgccgattc tgcggcacta cgtgggaccc aatcacttcc gggtactcgg cgtgccgttg
     1741 ctgcgtggga gggccttcga ccagcgtgat cgcgccggaa gcccccgcgt cgtggtcatc
     1801 agcgagagcg cggcccgccg attctggccc aacagcgatc ctatcg
//
LOCUS       DATIFF010000050         3611 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2005735, whole genome shotgun sequence.
ACCESSION   DATIFF010000050 DATIFF010000000
VERSION     DATIFF010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3611
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2005735"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..590)
                     /locus_tag="VLD58_00790"
     CDS             complement(<1..590)
                     /locus_tag="VLD58_00790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52855.1"
                     /translation="MTRALACLLLIGSLLLIVCSALHPLLPLNGVGDLTMIAAMARWR
                     WIHLGLLYGTGMIIAGIWVRWMIAPGEQRQGLAVAFSVLVIGEALNGVNIGFMAGAGT
                     EFARLYAAGTDLSQIYQAQHLAAVMSGKLGGFLVSIAAGLIAAATARSGTEPRWMVGL
                     ALLACGAGLAGNLFAPPGHPLMLTSVGLMAVWQVGAA"
     gene            complement(712..2814)
                     /locus_tag="VLD58_00795"
     CDS             complement(712..2814)
                     /locus_tag="VLD58_00795"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSB52856.1"
                     /translation="MAPNRPFLKRFPLLVALVYAVFGTLWIIFSDRLWSHLQDRAFPE
                     LVRLQTTKGLIFVALTSLMFWYMVRWAMLRVGRAEAARGASEARYRQIFERSTTVNLV
                     LDVGSMRMVDANPAAVMFYGWPREELIGKPVAEITALPEAVVRDMIEAAEGERRNFFV
                     ARHRLRSGVVRDVEVHSSPFELDGRRVLFSIVHDITDRLRAERQLVESEANYRRALEQ
                     ASDAIVVSDRQGAILEVNARTEEILGFRREEIVGRRLEDFLPAEDRERKPLRLRDLLD
                     GGSLLAERRLQRKNGTLADVEISARDLGDGRFQAIVRDISERRRLEEQLRQAQKMEAV
                     GQLTGGIAHDLNNLLTVVLANSEIMASDLPVGREDLKSDLGELQAAARRGAQMIRKLL
                     SFSRHAPLTYQVLDLGRVVEDLLGTLRRLLPAHIEVEFSREPEAVKVLADSGAIEQVL
                     LNLATNARDAMPRGGTLRLETRRVDVARPPDGALPGSYGCIVVRDTGIGMDERVRARA
                     FEPFFTTKPPGEGSGLGMAMIYGLTQQHGGFLELDSELGKGTTIRVYFPLARDDQPLA
                     ELGGQSPVLHGGVEQILLVEDEDGLRRVAQRALERVGYKVITASDGLEALEAYRKCAK
                     TVDLIITDVVMPKLGGLALYRTLRQEGHTVRFLFTSGYAAHEIVRGDLPETDLLLLQK
                     PWTLADLTQRVREVLDRK"
     gene            complement(2830..3486)
                     /locus_tag="VLD58_00800"
     CDS             complement(2830..3486)
                     /locus_tag="VLD58_00800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52857.1"
                     /translation="MIRVASLRLATTLLLVPAALAAQEAGAFTITRGADTVALERWSR
                     DSSILSASLTRVAGASARERVRYKATLLPDASAPLIELSVWRGEDPEDMPARQTTRII
                     FKDDSVAVDEATRWSGVRSIILPTQRSAIAYLNLSIALMEQATRRAESTRGDSVAVPF
                     FNLGGGQTVTGVVRRIGADSALVRIGTVEFRLKVDGTGRILGGSVPSQGLEITRGAGR
                     "
BASE COUNT          571 a         1311 c         1194 g          535 t
ORIGIN      
        1 gccgccccca cctgccacac cgccatcagc cccaccgacg tcagcatcag cggatgaccc
       61 ggtggcgcga agagattccc ggcgaggcca gccccgcacg cgagtaacgc gagccccacc
      121 atccagcgcg gctcggtccc gctccgggcc gtcgccgccg cgatcagtcc cgccgcaatc
      181 gataccagga acccgcccag cttccccgac atcaccgccg cgagatgctg cgcctggtag
      241 atctggctca ggtccgtccc cgccgcatac aaacgggcga actcggtccc cgcccccgcc
      301 atgaacccga tgttgacccc gttgagcgcc tcgccgatca ccaggaccga gaacgccacc
      361 gccagcccct gccgctgctc gcccggcgcg atcatccagc gcacccagat gccggcgatg
      421 atcatcccgg tcccgtagag gagcccgagg tggatccagc gccaccgcgc catcgccgcg
      481 atcatcgtga ggtcgccgac gccgttgagc ggcaggagcg gatgcagcgc cgagcagacg
      541 atgaggagga gactgccgat caggaggagg caggcgagag cgcgggtcat agagggccgg
      601 aggccggtgg ctggcggagg ccggagcgga ttgtcggcaa cttaactcga tatggttccg
      661 cgtgcggatg agttccagcc tccgccggcc tccagcctcc tgcctccaac ctcacttcct
      721 gtccagcacc tcacggaccc gctgggtgag atcggccaga gtccacggct tctggagcag
      781 cagcaggtcg gtctcgggca ggtcgccccg gacaatctcg tgggccgcgt agccactggt
      841 gaagaggaac cgcaccgtgt gcccttcctg ccgaagcgtg cgatacagcg ccagcccgcc
      901 cagcttgggc atcaccacgt cggtgatgat gagatccacc gtcttggcac acttgcgata
      961 ggcctcgagc gcctccagcc cgtcggaggc ggtgatcacc ttgtagccca cccgctcgag
     1021 cgcccgctgg gccacccgcc gcagtccgtc ctcgtcttcg accaggagga tctgctccac
     1081 gcccccgtgc aggaccgggc tctgtccccc cagctcagcc agcggctggt catcccgcgc
     1141 cagcgggaag tagacccgga tcgtggtccc cttcccgagc tcgctgtcga gctcgaggaa
     1201 gccgccatgc tgctgggtca ggccgtagat catcgccatg ccgagcccgc ttccctcgcc
     1261 ggggggtttg gtggtgaaga acggctcgaa ggcgcgggcc cgcacccgtt cgtccatacc
     1321 gatcccggtg tcgcgcacca cgatgcaacc gtaggaaccg ggcagcgcgc cgtcgggcgg
     1381 gcgggccacg tcgaccctcc gggtctcgag ccggagggtg ccgccgcggg gcatcgcatc
     1441 gcgcgcgttg gtggcgaggt tgagcagcac ctgctcgatg gcgccgctgt cggccagcac
     1501 cttgacggcc tccggctcgc ggctgaactc cacctcgatg tgggccggaa gcagacgacg
     1561 gagcgtgccc agcagatcct cgaccacccg gccgagatcg agcacctggt aggtaagcgg
     1621 agcatgccgg ctgaaggaga ggagcttgcg gatcatctgg gccccgcggc gcgccgccgc
     1681 ctgcagctcg cccaggtcgc tctttagatc ctcccgtccc accggcagat cggaggccat
     1741 gatctcgctg ttggccagca ccacggtgag caggttgttg aggtcgtgcg cgatgccgcc
     1801 ggtgagctgt cccaccgctt ccatcttctg ggcctggcgc agctgttcct ccagccggcg
     1861 ccgctcgctg atgtcacgca cgatggcctg gaaccgcccg tcgcccaggt ctctggcgct
     1921 gatttcaaca tcggcgaggg tgccgttctt ccgctgcagc ctccgctcgg ccaggagcga
     1981 gccgccgtcg aggagatccc gcagccggag cggcttccgc tcgcggtcct ccgccggcag
     2041 gaagtcctcc agccgccgac ccacgatctc ctcgcgccgg aagccgagga tttcctcggt
     2101 ccgggcattc acctcgagta tcgcgccctg ccggtcactc accacgatcg cgtcggaggc
     2161 ctgctccagc gcccggcggt agttcgcctc cgactccacc agctgccgtt cggcccggag
     2221 ccggtcggtg atgtcgtgca cgatggagaa gagcacccgc cggccatcca gctcgaaggg
     2281 gctcgagtgc acctcgacgt cgcgcaccac gcccgaccgg agccggtggc gcgccacgaa
     2341 gaagttgcgg cgctctccct cggccgcctc gatcatgtcc cgcaccaccg cctccggcag
     2401 cgcggtgatc tccgcgaccg gcttgccgat cagctcttcc cggggccagc cgtagaacat
     2461 caccgcggcc gggttggcgt cgaccatgcg catcgagccg acgtcgagca ccaggttcac
     2521 cgtggtgctc cgctcgaaga tctggcggta gcgcgcttcg ctcgcgcccc gggcggcctc
     2581 ggcccggccc acccggagca tcgcccaccg caccatgtac cagaacatga ggctggtcag
     2641 ggcgacgaag atgagaccct tggtcgtctg gagacggacc agttccggga aggcgcgatc
     2701 ctggaggtgg gaccacaggc ggtcggagaa gatgatccac agcgttccga agaccgcgta
     2761 gaccagcgcc accagcaggg ggaagcgctt caggaagggc cggttggggg ccatggccgg
     2821 ggcggcctcc tagcgtccgg ctccgcgggt tatctcgagt ccctggctcg gcaccgagcc
     2881 gccaaggatc cggccggtcc cgtcgacctt gaggcggaac tccacggtcc cgatccgcac
     2941 cagggcggaa tcggccccga tccgccgcac cacgccagtg accgtctggc ccccgccgag
     3001 attgaagaac ggcaccgcca cactgtcacc acgggtcgac tcggcccggc gggtggcctg
     3061 ttccatcagg gcgatggaaa ggttgagata cgcgatggca gaacgctgag tggggaggat
     3121 gatgctgcgc accccgctcc agcgcgtggc ctcatccacc gccacgctgt cgtccttgaa
     3181 gatgatccgg gtggtctggc gggcgggcat gtcttccgga tcctcgcccc gccacacgga
     3241 gagctcgatc agcggcgcgc tggcatccgg cagcagggtg gccttgtacc gcacccgctc
     3301 cctggccgag gcgcctgcca cccgcgtgag gctggcggag aggatgctcg aatcacggct
     3361 ccaccgctcg agcgcgaccg tatccgctcc gcgggtgatc gtgaaggcgc cggcttcctg
     3421 agcagcgagt gcagcgggga cgagcaggag ggtcgtcgcg aggcgaagtg aagccacccg
     3481 gatcatggca cgtcctgggg tgaatgcggc ccgtgagggg gagcgcgggt tttcccgcgc
     3541 cggaccgcga gtgattgcta ccaagttata cctgccaggc ccctagcatg gacccccacc
     3601 ttccccgggg g
//
LOCUS       DATIFF010000051         4426 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1852166, whole genome shotgun sequence.
ACCESSION   DATIFF010000051 DATIFF010000000
VERSION     DATIFF010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4426
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1852166"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..859
                     /locus_tag="VLD58_00805"
     CDS             <1..859
                     /locus_tag="VLD58_00805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSB52858.1"
                     /translation="IFAFGSDDQKKQWLPQMASGKVIGCFGLTEPDFGSNPAGMITTA
                     RETADGWVLNGAKMWITNGSQAPVAIVWAKTGALDDSKSVRGFIVPTDTRGFAARDQK
                     GKLSLRASDTSELILQDVQLPKDAILPKSGGLKSPLSCLTQARYGIAWGAIGAAMACY
                     DEALQYAKNRVMFDRPIAQTQIQQVRLAEMLTEITKAQCLALQLGRLKDRGTMTPQQV
                     SLAKRNNVNIACECAREARRLLGANGILAEYHSMRHMANLESVYTYEGTHDMHSLILG
                     EAVTGLGAF"
     gene            1060..4251
                     /locus_tag="VLD58_00810"
     CDS             1060..4251
                     /locus_tag="VLD58_00810"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB52859.1"
                     /translation="MEVPQVLAGRYAIEREIGRGGMAVVYLGRDLRHLRDVAIKLFRV
                     ENDEPSDGSQRFLQEIQIAARLAHPNILPLHDSGEADGFLYYVMPYVPGETLRRRMER
                     EGALPVADALRIAGDVADALAYAHSHGVIHRDIKPENILFISDHAVVADFGIARAISA
                     GGFDELRMAGPVGTPTYMSPEQARGESRVDGRSDVYSLGCVLYEMLTGEPPFRGSTPE
                     EVVVQHLEVEPQPVQVRRPTLSADLQDTIGKSLAKHPADRYQTAQQMADALGRLAGGS
                     TQGGSIAASRLDRPDSVREPQESWLRRWAAPGIAALGIVVAVLWTTALRQPSLDTSLY
                     MVAPLLHGPGVPPTLSGDQCRRLLHEALSRWDGIKLTDRRWVDDRLDQAGGHATLEEM
                     LRLARLGGAGRLLAGEVSTWGDSIRVRGVVYDVSRGPEVLREKTVTLSARDLNDAEQK
                     FAELADSLILPRPQIATAATGLFGTRVLGALVMYDSAHASLAQWELDVAARQFRAALA
                     ADPNYGLAHLWLAQTMNWQGADADEWKDEALAGARSQPPLVGQEALWSKGLVALGEAR
                     YQDACKAYDEMLKRDTLDFRAWFGRGECRSQDHVVVRDPKSESGWAFRASYQAAINDY
                     QKALMLVPSVHRAYRGAAFQRLASLFYAESHVYRWGRPLAPDTGAYAGFPWLTHDTVA
                     FVPWPIESLNTGNRRIVPEGPASAVDRNMQSLMRVTSMWVKAFPESPDAWEARAGILE
                     VTGDLEGTSDTAAALPALGHALRLAATRADSLRIRTFQTQILVKLGRFDAAARAADSV
                     LAAAGNPTPEEADQITGLAALTGRAGLLATLMRLASSQPLPAITDEYPAGTHPGLRAS
                     LAGLMAYSVLGGPPDSAMRMLRVVDDQIRAYVAQNQRAAFRDEALQFPMMMLHPSEVA
                     GLAVPAHPPRMYLRRFQYYLHRGDTTALRAALDTIKTVRSTGRPATVAVEAVYHEAVL
                     SLAVRDTAGAIRQLDQSLNSLPAADHDFINRPAASGSLVRAMMLRAELAVRLHDLPTA
                     RRWAAGAAGLWAKADPGFQPGIDSMRRIASGNF"
BASE COUNT          678 a         1581 c         1482 g          685 t
ORIGIN      
        1 gatcttcgcc ttcggctccg acgaccagaa gaagcagtgg ctgccccaga tggcgagcgg
       61 caaggtgatc ggctgcttcg ggctcacgga acccgacttc ggctccaacc ccgcggggat
      121 gatcaccacc gcccgggaaa ccgcggatgg ctgggtgctg aacggcgcca agatgtggat
      181 caccaacggc tcacaggccc ccgtggcaat cgtctgggcc aagaccggcg ccctcgacga
      241 ttcgaagtca gtgcgcgggt tcattgtccc caccgacacc cggggctttg ccgcccggga
      301 ccagaagggc aagctctcgc ttcgcgcctc ggacaccagt gagctcatcc tccaggatgt
      361 ccagcttccc aaggacgcca ttctccccaa gtccggcggc ctcaagagcc cgctcagctg
      421 cctcacacag gcccgctacg gaatcgcctg gggcgccatc ggggcggcca tggcgtgcta
      481 cgacgaggcc ctccagtatg cgaagaaccg tgtcatgttc gaccggccca tcgcccagac
      541 ccagatccag caggtgcgcc tggccgagat gctgaccgag atcaccaagg cccagtgcct
      601 ggcccttcag ctcggccggc tcaaggatcg gggcaccatg acgccgcagc aggtttccct
      661 ggccaagcgg aacaacgtca acatcgcctg cgagtgcgcc cgcgaagccc gccgcctcct
      721 cggcgcgaac gggatactgg ccgagtatca ctccatgcgg cacatggcca acctcgagtc
      781 ggtgtatacc tacgagggca cccatgacat gcactcgctg atactgggcg aggcggtgac
      841 ggggttgggg gcgttctgag aggccggagg cgggaggccg gcgcaggccg gagagactgg
      901 gtgcatcgcg cggcctcgtt agggtggtgg cctgatttcg cacctccggc ctccgccggc
      961 caccggcctc cggcccttga ctctccctag ccccactcgg tctttccccc tactatcgat
     1021 acaagtctta ccacggacag ttgtctggac gaagagccat tggaggtccc ccaggttctg
     1081 gcgggccgct acgccatcga gcgcgagatc gggcggggcg gcatggccgt ggtctatctc
     1141 ggacgtgacc tgcgtcacct ccgggacgtc gcgatcaagc tcttccgggt cgagaacgac
     1201 gagccctccg acggcagtca gcggttcctg caggaaatcc agatcgcagc ccggctggcg
     1261 caccctaaca ttctcccgct acatgactcg ggggaggccg acggcttcct ctactacgtc
     1321 atgccctacg tgccggggga gaccctccgg cgccgcatgg aacgggaagg tgccctcccg
     1381 gtcgcggatg ctttgcgcat cgccggtgac gtggccgacg ccctggcgta cgcccacagc
     1441 catggcgtga tccaccggga catcaagccc gaaaacatcc tcttcatctc cgatcacgcg
     1501 gtggtggccg atttcggcat cgcccgcgcg atcagcgccg gtgggttcga cgagctgcgc
     1561 atggccggtc cggtcgggac ccccacctac atgagccctg agcaggcccg gggcgaatcg
     1621 cgggtcgacg gccggagcga cgtctacagc ctcggatgcg tgctgtacga gatgctcacc
     1681 ggcgagcctc ccttccgcgg cagcacgccg gaggaagtgg tggtgcagca cctcgaagtt
     1741 gagccgcagc cggtacaggt tcgccggccc accctctcgg ccgacctgca ggatacgatc
     1801 gggaagtcgc tcgccaagca ccccgccgac cgctaccaga cggcgcagca gatggccgat
     1861 gcgctgggcc ggcttgccgg tggatcgacc cagggcggca gcatcgccgc cagccgcctg
     1921 gatcggccgg acagcgtccg cgagccccag gaatcgtggc ttcgccgctg ggccgcgccc
     1981 ggcatcgccg ccttgggcat tgtggtcgcc gtgctctgga ctaccgcact ccgccagcct
     2041 tcgctggata cctcgctcta catggtggcg ccgctgctcc acgggcccgg cgtcccgccg
     2101 accctgagcg gggaccagtg ccgccgcctg ctgcacgagg cgctctcccg ctgggatggg
     2161 atcaagctca ccgatcgccg ctgggtggac gaccggctgg atcaggcggg tggccacgcc
     2221 acgctggagg agatgctccg gctggcgcga ttgggcggcg cgggccggct cctcgccggt
     2281 gaggtgagca cctggggcga ctcgatccgg gtgcgaggcg tcgtgtacga cgtctcccgc
     2341 ggccccgagg tgctgcgcga gaagaccgtc accctctccg cccgcgatct caatgacgcg
     2401 gagcagaagt tcgccgagct ggccgactcc ctgatcctgc cgcgccccca gatcgccacc
     2461 gcggcaacgg gcctcttcgg cacccgggtg ctgggcgcgc tggtgatgta cgactcggcc
     2521 cacgcctccc tggcgcagtg ggagctcgat gtcgctgccc ggcaattccg ggccgcgctc
     2581 gccgccgatc ccaactacgg gctcgcccac ctctggctgg cccagaccat gaattggcag
     2641 ggggccgacg cggacgaatg gaaggacgag gcgctggccg gggcccgatc gcagccgccg
     2701 ctggtggggc aggaggccct ctggagcaag ggactcgtgg ccctgggcga agcccgctat
     2761 caggacgcct gcaaggcgta cgacgagatg ctcaagcgcg acaccctcga cttccgggcc
     2821 tggttcgggc ggggagagtg ccggtcgcag gaccacgtag tcgtccggga cccgaagagc
     2881 gagagcggct gggccttccg ggccagctac caggcggcga tcaacgacta ccagaaggcg
     2941 ctgatgctgg tgccttcggt gcaccgcgcc tatcggggcg ccgcatttca acggttggcc
     3001 agcctgttct atgcggagtc gcacgtgtac cggtggggcc ggccgctggc acccgatacc
     3061 ggggcctatg ccggcttccc gtggctcacc catgacacgg tggcgttcgt tccctggccg
     3121 atcgaatcgc tgaacaccgg caacaggcgc atcgtccccg agggcccggc ttccgcggtt
     3181 gaccgcaaca tgcagagcct gatgcgggtc acttcgatgt gggtgaaggc cttccccgag
     3241 agtcccgatg cctgggaagc gcgggccggc attctggagg tcaccggcga tctcgagggc
     3301 acgtccgaca ccgccgcggc cctgccggcc ctcggacatg cgctcagact cgccgccacc
     3361 cgggcggaca gcctgcggat ccggaccttc caaacccaga tcctggtcaa gctcggccgg
     3421 ttcgacgccg cggcgcgggc ggccgattcg gtgctggccg cggcagggaa cccgacgccc
     3481 gaagaggccg accagatcac cgggctcgcc gcgctcaccg ggcgggccgg tctgctcgcc
     3541 actctgatgc ggctcgcctc gagtcagcca ctgccggcga tcaccgatga atacccggcc
     3601 ggcacccatc cggggctgcg cgcctcgctc gccggcctca tggcctactc ggtgctcgga
     3661 ggcccgcctg acagcgccat gcgaatgctt cgcgtggtcg acgaccagat ccgggcctac
     3721 gtcgcccaga accagcgggc cgccttccgg gacgaggcgc tgcaattccc gatgatgatg
     3781 ctccaccctt ccgaggtggc ggggctcgcc gtcccggccc atccaccccg gatgtatctc
     3841 cggcggttcc agtattatct acaccgggga gacaccaccg ccctgcgggc cgcgctggat
     3901 acgatcaaga cggtgcgctc gaccgggcgg ccggcgacgg tggcggtcga ggcggtgtat
     3961 cacgaagcgg tgctctcgct cgccgtccgg gataccgcgg gcgcaattcg ccagctggat
     4021 cagtcgctca actcgctgcc ggccgcggac catgacttca tcaaccgtcc ggcggcgtcg
     4081 ggatcgctgg tccgcgcgat gatgctccgc gccgagctgg ccgtgaggct gcatgacctg
     4141 cccaccgcac ggcgctgggc ggccggggcg gccggcctgt gggccaaggc cgatccaggc
     4201 ttccagcccg gtatcgacag catgcgccgg atcgcaagcg gtaacttctg agtctcaccc
     4261 cctagactct ttcaggtgga ggtaccgtgg gtcgctcgtt cgtcgtcccg acgcccggcc
     4321 gtgagcttcg ctgggcggca ctcgttctcg ttggcttgag cggctcctgc gtgccggccg
     4381 gccgcccgct tccgatccct gtcccgcgga ccggcgacaa tctccc
//
LOCUS       DATIFF010000052         9855 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_775178, whole genome shotgun sequence.
ACCESSION   DATIFF010000052 DATIFF010000000
VERSION     DATIFF010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9855
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_775178"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..858)
                     /locus_tag="VLD58_00815"
     CDS             complement(<1..858)
                     /locus_tag="VLD58_00815"
                     /inference="COORDINATES: protein motif:HMM:NF040105.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSB52860.1"
                     /translation="MTTATSGALSRFGPDSALARAPEIAQESAVFRDVLAEIGKVIVG
                     QQVLLERLLIGLLADGHILLEGLPGLAKTLAVRTLAATIDCDCRRVQFTPDLLPADLI
                     GTLIYNQRSGDFTVQKGPIFTNILLADEVNRAPAKVQSALLESMQEKQVTIGGETHRL
                     PALFLVLATQNPLEHEGTYPLPEAQVDRFLFKLLVTYPNRTEEREIIDRMTDHAEPSA
                     RVVLHPDRVLRARDIVRGLYVDDRIKEYVLDIVAATREPAAWKVPELETLVQFGASPR
                     AGIYLVKAAK"
     gene            963..1706
                     /locus_tag="VLD58_00820"
     CDS             963..1706
                     /locus_tag="VLD58_00820"
                     /inference="COORDINATES: protein motif:HMM:NF016430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor"
                     /protein_id="HSB52861.1"
                     /translation="MTSSATGAPQGFPTTRASVVEAAAGTDPLIRERAVAAIIEVYWR
                     PCYVHLRLKWGLVREEAEDLTQEFFARTLAAGFFEKFDPARARFRTFLRGCLDHLAAN
                     TRRAEQRLKRGGGVAHLSLDFADAEQHLAGLATGDDPDELFRREWIRSLFVVAVEALR
                     AHATAQGHELRFRIFSRADLEPADGAPRPSYREMADEFRLPVTQVTNHLAWARREFRR
                     HVLERLRELSGSDAEYRAEARELFGVEPS"
     gene            1703..2611
                     /locus_tag="VLD58_00825"
     CDS             1703..2611
                     /locus_tag="VLD58_00825"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB52862.1"
                     /translation="MTHLSDGTVAHLRRVADWPELPGDRYEIVEPVGQGGMGTVFRAR
                     DRLLDREVALKVLRPELSGPDALVQLDREARVQARLEHPGVVPIHDVGTLADGRVYYL
                     MKLVRGDALDTFVRGATLQARLRLFLRVCETVAFAHANGVVHRDLKPSNIMIGAFGEV
                     LVLDWGIAKVGDADASEDGAVLGTPGFMAPEQASGAGSMIDPRTDIFALGAILRGLVG
                     EAAVPRPLRSIIERAMAKEMQARYSNVGELGEDVTRFLDGEPVRAHRETPLERISRWY
                     TRYQTAILLVVAYLTLRLLFLAFRGF"
     gene            2701..3063
                     /locus_tag="VLD58_00830"
     CDS             2701..3063
                     /locus_tag="VLD58_00830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52863.1"
                     /translation="MNKPVLGLVLGAILGALDGLTALISAPETAPEIKTIVPLSMLKG
                     LIAGVIIGVVARKVRSLPVGVLIGLGVGALLALPVALGTDPNTGKQYFWEIMIPGSIV
                     GLIVGYATQRYGSSPKPA"
     gene            3070..3717
                     /locus_tag="VLD58_00835"
     CDS             3070..3717
                     /locus_tag="VLD58_00835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52864.1"
                     /translation="MDNPRRAGQSLLVGILLPLVVLGMHPTAHDLTADSGQRMTVVNH
                     LVHGIALASQPIVMLGLIGLSQFLGWTPFTTGGIVFYSASMVGMMTAALASGFVASDV
                     LAAAQGGAGGATPDVDLLLNYTHYWNQAFAKLGIIAAGIALVLWSLEILDGRRLSRLS
                     GYVGVIVGIVLALGVLSGRFALNVPGIILATGLEALWMAMVGIQLIRAERPAAGK"
     gene            complement(3745..4842)
                     /gene="ychF"
                     /locus_tag="VLD58_00840"
     CDS             complement(3745..4842)
                     /gene="ychF"
                     /locus_tag="VLD58_00840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HSB52865.1"
                     /translation="MLRLGIVGLPNVGKSTLFNALTSAGALVANYPFATIEPNTGVVT
                     VPDPRLAELARIVGPERTVPAAVEFVDIAGLVKGASKGEGLGNQFLANIREVDAIVHV
                     VRCFDDEDVQHVMTSVDPARDREVINIELQLADLASVEKRLDKSARAAKSGDAQAKLE
                     ARLLTQLKEALADGKAARTVQPTEEEKPTYRAFNLLTSKPVLYAANVLESELSTGNRH
                     VEALRAAVEKDREEAEIVIFSGKVEAELAELPVEDRAEFLASLGATESGLDRLAHAAY
                     HLLGLMSYFTAGEKEVRAWTIHRGDRAPQAAGVIHSDFEKGFIKAETVAYADFVRVGG
                     WKPARDQGLARAEGKDYLVKDGDVMLFRFSN"
     gene            complement(4990..5559)
                     /gene="pth"
                     /locus_tag="VLD58_00845"
     CDS             complement(4990..5559)
                     /gene="pth"
                     /locus_tag="VLD58_00845"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: protein motif:HMM:NF013368.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HSB52866.1"
                     /translation="MRAIVGLGNPGTEYENTRHNAGFLLVDRLASRWKFPPFRRVPAA
                     REARGSALGREVTLIKPQTYMNRSGAALASLRSLPGFDPTQELLVVTDDFALPLGKFR
                     LRGAGTAGGHNGLKSIEGSLRRQDYARLRIGIGPLPAGTRDTADFVLEQFSREERAEL
                     EELMETMCQATECWVTDGIEVAMNRFNGR"
     gene            complement(5563..6231)
                     /locus_tag="VLD58_00850"
     CDS             complement(5563..6231)
                     /locus_tag="VLD58_00850"
                     /inference="COORDINATES: protein motif:HMM:TIGR00731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HSB52867.1"
                     /translation="MAQSATLQASRRAGSGKGAARSLRRAGSVPAVIYGHGRPAEALS
                     VDAASLGKLLGSISAASTVLDVAIEGQAPVKALIREIQRHPLRATDILHFDLYEVRAD
                     EKITVEVPVHLVGTADGVRNFGGVLDQVLHRLEILVFPGDIPSHIEVDVTNLLIGKSI
                     FVRDVKVEKAEVLNPPNLPVCSCVAPRTEEVAAPAATGEAVAEPELIRKPKPEEEGEG
                     AEKE"
     gene            complement(6271..7221)
                     /locus_tag="VLD58_00855"
     CDS             complement(6271..7221)
                     /locus_tag="VLD58_00855"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HSB52868.1"
                     /translation="MSELLSRSQMLLLSGTANRPLSEEVAAHLGQPLCQVTVKRFSDG
                     ELFVKIDENVRGRDVFVIQPTNPPAENLLELLLLIDAARRASAARITAVIPYFGYARQ
                     DRKDQPRVAISAKLMANMVPVAGADRVLGMDFHSHQMQGFFDLPVDHLYAAPVFVNHY
                     RQKSLRDLVVVASDVGGAKMARGFAKRLNATLAIIDKRRPSANVAEVVNVVGEVSGKD
                     CIIPDDMIDTGGTMSEAVHALKRLGAQDIYCCATHALLSGPAVERLQNSPVTEVAVTN
                     TIMLPPERKFEKLKVLSIAPLLAKAIGYTHSDQSVSSLFD"
     gene            complement(7280..7350)
                     /locus_tag="VLD58_00860"
     tRNA            complement(7280..7350)
                     /locus_tag="VLD58_00860"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7316..7318),aa:Gln,seq:ttg)
     gene            complement(7462..8322)
                     /gene="ispE"
                     /locus_tag="VLD58_00865"
     CDS             complement(7462..8322)
                     /gene="ispE"
                     /locus_tag="VLD58_00865"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: protein motif:HMM:TIGR00154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HSB52869.1"
                     /translation="MTTEVTLRAPAKLNLFLRVLAREDDGYHGIESLFCLIDLADELK
                     AERREGRGVSLTVGGADCGPEEMNLATRAARMVLDATGNPCAVHLTLTKRIPIQAGLG
                     GGSSDAAAALTAVNQLVNNAVPRHELLQFAARLGSDVPFFLSGGSLALCWGHGERMLR
                     LPPLPASPGLLLIPPIGISTPEAYRQVDAGRHGSAKRGAVAMDLDTLGGWGNVARLGG
                     NDFEFALFGRHPELKQGFEALAATHPLLCRMTGSGSGLFAIYRNTRDREDARMQLSPR
                     LGRALTFETQ"
     gene            complement(8319..9341)
                     /locus_tag="VLD58_00870"
     CDS             complement(8319..9341)
                     /locus_tag="VLD58_00870"
                     /inference="COORDINATES: protein motif:HMM:TIGR00374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HSB52870.1"
                     /translation="MTAPPPRRRAPVWQILAGVLISAVLIYFSFRGVHFREVIDYVQS
                     AKSLPIVLGVTLATVTFALRIFRWQLLLKGDDGRQLGMAPLWHAIAMGFMANNTLPLR
                     MGEVVRTYAAARLTETRFTSVLASIAVERLFDALTVISLLALGLFTTHLPENAVAGFG
                     VQRIVSVAGALVLAGLVIAGAVVAFPVAAERAIRKLVPSDKLAYRLIGMIEGVRHGFS
                     VLRSPARIAGVLIWSFVIWGVSAVSFYVMLGAFDIQNVDFSGALLMQGLIMFGIAVPS
                     TPGYAGAFELPIIAVLALYGIPRSQALAYALTYHITTFIPITLLGAWSIFRTGLGLAA
                     LRREGT"
     gene            complement(9346..>9855)
                     /locus_tag="VLD58_00875"
     CDS             complement(9346..>9855)
                     /locus_tag="VLD58_00875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52871.1"
                     /translation="LVSAPIVPIESLAPGPMPMPLPVPVPIAVEESVAVVAAVQAEFD
                     GWDLAASYGYFERLVAGPAVAEPEPVAAPAVVAPVAPAPAPIPTPVMAPPAPAPVAAP
                     APAPAPVAAEPMVVEISELCYRGRSALERADVVRREIQTALSASTSPAAIQPLVNELL
                     DLVELALVD"
BASE COUNT         1593 a         3236 c         3378 g         1648 t
ORIGIN      
        1 cttggccgct ttcaccaggt agatgcccgc ccggggtgac gcgccgaact gcaccagcgt
       61 ctcgagctcg ggaaccttcc atgccgccgg ttcgcgggtc gcggcgacga tatccagcac
      121 atactccttg atccggtcat ccacgtacag accgcggacg atatcacggg cccgcagtac
      181 ccggtccggg tgcagcacca cccgggcgct cggctcggcg tggtcggtca tccggtcgat
      241 gatctcccgc tcctcggtcc ggttgggata ggtcaccagc agcttgaaga gaaaccggtc
      301 gacctgcgcc tccggcagcg gataggtgcc ctcgtgctcc agcgggttct gggtggcgag
      361 caccaggaag agggccggga gccgatgggt ctcgcccccg atggtgacct gcttctcctg
      421 catcgactcg agcagcgcgc tctggacctt cgccggcgcg cggttcacct cgtccgcgag
      481 gaggatgttg gtgaagatcg ggcccttctg caccgtgaag tcgccggagc gctggttgta
      541 gatcagggtg ccgatgaggt cggcgggcag caggtcggga gtgaactgta cccggcggca
      601 atcacagtcg atcgtcgcgg cgagggtccg caccgccagg gtcttggcga gaccggggag
      661 tccctcgagg aggatatggc catccgccag gagaccgatc aggagccgtt cgagcagcac
      721 ctgctgaccc acgatgacct tgccgatttc ggcgaggacg tcgcggaaga cggcgctttc
      781 ctgggcgatt tccggtgcgc gggcgagcgc cgagtcggga ccgaatcggg agagggcgcc
      841 gctcgtggct gtggtcattc gaacagggtc cttggggcag ggagaataag tatacacttg
      901 cctgtcccga ccggaacgag gtcaaccttg aacaccccgg cgctgctgct gcactattgg
      961 gcatgacctc ttccgccacc ggagctccgc agggctttcc caccacccgg gcctcggtgg
     1021 tcgaggcggc cgccgggacc gatcccctga ttcgcgagcg cgcggtggcc gcgatcatcg
     1081 aggtctactg gcggccctgc tatgtccatc tccgtctcaa gtggggactg gtccgggagg
     1141 aggcggagga tctcacccag gagttcttcg cccgtaccct ggcggcggga ttcttcgaga
     1201 agttcgaccc ggcccgggcc cggttccgga ccttcctccg cggttgcctc gatcacctgg
     1261 cggccaatac ccgccgggcc gagcagcggc tgaagcgggg cggaggagtg gcccatctgt
     1321 cgctggattt cgccgatgcg gagcagcatc tcgcggggct ggccacgggc gacgaccccg
     1381 acgagctctt ccgccgcgag tggatccgca gtctcttcgt agtcgcggtc gaggcgctca
     1441 gggcccacgc cacagcccag ggccatgagc ttcgtttccg gatcttctcc cgcgcggatc
     1501 tcgagccggc cgatggcgca ccgcggccgt cctatcggga aatggctgac gaattccggc
     1561 ttccggtcac ccaggtgacc aatcacctcg cctgggcccg ccgggagttc cgccgtcatg
     1621 tgctggagcg cctccgcgag ctctcgggga gcgatgccga gtaccgggcc gaggcccgcg
     1681 aactgttcgg ggtggagccg tcatgacaca tctatccgac ggcaccgtcg cgcaccttcg
     1741 cagggtagcg gactggcccg agctcccggg cgatcgctac gagatcgtcg aaccggtcgg
     1801 gcagggggga atggggaccg tcttccgagc ccgcgaccgg ctgctcgacc gtgaggtggc
     1861 gctcaaggtc ctgcggccgg agctgagcgg ccccgatgcg ctggtccagc tcgatcgcga
     1921 agcccgggtt caggcccgcc tcgagcatcc cggcgtggtg ccgattcacg acgttggcac
     1981 gctcgccgac ggccgggtct actacctgat gaagctggtc cggggcgacg cgctcgacac
     2041 cttcgtccgc ggcgcgaccc tccaggctcg gttgcgcctc ttcctcaggg tctgtgagac
     2101 ggtggcgttt gcccacgcca acggcgtggt acaccgggat ctcaagcctt cgaacatcat
     2161 gatcggcgcc tttggcgagg tgctcgtgct ggactggggt atcgccaagg tgggtgacgc
     2221 tgacgcgagc gaggatggtg cggtgctcgg cacgcccggc ttcatggcgc cggaacaggc
     2281 gtcgggggcg gggtccatga tcgacccgcg gactgacatc ttcgcgctgg gtgccatcct
     2341 ccgaggcctc gtcggcgagg cagcggtgcc gcgcccactc cgctcgatca tcgagcgggc
     2401 gatggcgaag gagatgcagg cccgttattc gaatgttggc gagctgggcg aggacgtcac
     2461 ccggtttctg gatggggagc cggtccgggc ccatcgggaa acgccgctgg agcgcatcag
     2521 tcggtggtac accaggtacc agactgccat tctcctggtg gtggcctatc tcacgttgcg
     2581 gctcctgttc ctggcgttcc gggggttcta acgggtcacc ccgataaagg atcgaggcag
     2641 ggcaggtaat ggggagtcgt ggggaagttc accgccaaac tcttgcctga ggttatcccg
     2701 atgaacaagc ccgtgcttgg gctggtgctg ggcgccattc tgggcgccct ggatggactc
     2761 accgcgctca tctccgctcc ggagaccgca cccgagatca agacgatcgt ccccctgtcg
     2821 atgctcaagg ggctcattgc cggtgtgatc atcggcgtgg tggcgcgcaa ggtacgatcg
     2881 ctgcctgtgg gggtcctcat cggactgggg gtcggagcgt tgctggcact ccctgtggcc
     2941 ctcggcactg accccaacac cggaaagcag tacttctggg agatcatgat cccgggatcg
     3001 atcgtcgggc tgatcgtcgg ctacgccacc cagaggtacg gatcctcacc caaacctgcc
     3061 tgaggcagct tggacaatcc ccgccgtgcc ggccagtcgc tgctggttgg catcctgctc
     3121 ccgctcgtgg tgctcggtat gcaccccacc gcgcacgatc tcaccgccga ttccgggcag
     3181 cggatgaccg tggtcaatca cctggtccac ggcatcgcgc tcgcctcgca gcccatcgtg
     3241 atgctgggcc tcatcgggtt gagccagttt ctcggctgga cccctttcac caccggcggc
     3301 attgtcttct attccgccag catggtgggc atgatgacgg ccgcgctggc gagcgggttc
     3361 gtggcgtcgg atgtgctggc tgcggcgcag ggcggggctg gcggggcaac gccggatgtc
     3421 gatctactgc tcaactacac ccactactgg aaccaggcgt tcgccaagct cgggatcatc
     3481 gccgccggca tcgcattggt gctctggtcg ctcgagatcc tggacggacg gcggctgtcg
     3541 cggctttcgg gctatgtcgg tgtgatcgtg ggaatcgtgc tggcgctggg ggtgctgagc
     3601 ggccggttcg cgctcaacgt cccgggaatc atcctggcta ccgggctcga ggcgctctgg
     3661 atggccatgg tgggtatcca gctcattcgc gcggagcgtc ccgcggcggg caagtgagtc
     3721 cgcccgccgg agctccggta aggttcagtt gctgaaccgg aagagcatga cgtcgccgtc
     3781 tttcactaga tagtccttcc cttcggcccg ggccagtccc tggtcccggg ccggcttcca
     3841 tccgcccacc cgcacgaaat cggcgtaggc gacggtctcc gccttgatga agcccttctc
     3901 gaaatcggaa tggatcacgc cggcggcctg gggcgcgcgg tcgccccggt ggatggtcca
     3961 ggcccggacc tccttctcgc cggcggtgaa atagctcatc aggcccagca ggtgatacgc
     4021 cgcatgcgcc agccggtcga gccccgactc ggtggcgccg agcgaggcga ggaattcggc
     4081 ccggtcctcg accgggagtt ccgccagctc cgcctccacc ttgcccgaga agatcacgat
     4141 ctccgcttct tcgcgatcct tctcgaccgc ggcccggagc gcctcgacat gccggttgcc
     4201 ggtggagagt tcgctctcca gcacgttggc ggcatagagc accggcttcg aggtgagcag
     4261 gttgaaggcg cggtaggttg gcttctcctc ctcggtcggc tgcaccgtgc gggcggcctt
     4321 gccgtcggcc agcgcttcct tgagctgggt gagaagccgg gcttcgagct tggcctgtgc
     4381 gtcgcctgac ttggcggccc gggccgattt gtcgagccgc ttctcgaccg aggcgagatc
     4441 ggcgagctgg agctcgatgt tgatcacctc gcggtcgcgg gcgggatcga ccgacgtcat
     4501 cacgtgctgc acgtcttcgt catcgaagca gcgcaccaca tgcacgatgg cgtcgacttc
     4561 ccggatgttg gcgaggaact ggttgccgag gccttcgccc ttgctggcgc ccttcaccag
     4621 gccggcgata tccacgaatt ccaccgcggc cggcacggtg cgctccgggc ccacgatcct
     4681 cgccagctcg gcgagccggg gatcgggcac ggtcaccacg ccggtgttcg gctcgatggt
     4741 ggcgaagggg tagttggcca ccagcgcgcc cgcggacgtg agggcgttga acagagtgga
     4801 cttgccgacg ttcgggagac cgacgatgcc taggcggagc attggttgat tttgggccga
     4861 tggctttcgg ccgttagccg ttagccgtta gccattagct aaagggcctg taagtcacaa
     4921 tcatctactc aacacaccac ggatagcact actcggatca gctaacggct aacggctaat
     4981 ggctaatggc taacggccat tgaaccgatt catcgcgacc tcaatgccgt cagtcaccca
     5041 gcattccgtc gcctggcaca tcgtctccat caattcctcc agttccgccc gctcctcgcg
     5101 ggagaactgt tccagcacga aatcggcggt gtcacgggtg ccggccggaa gcgggccgat
     5161 gccgatgcgg agccgggcgt agtcctggcg ccggagcgac ccttcgatgc tcttgagccc
     5221 gttatggccc cccgccgtgc ccgcgccccg gagccggaac ttgccgagcg gcagggcgaa
     5281 atcgtcggtc actaccagca gctcctgggt cgggtcgaac cccggaagcg aacggagcga
     5341 ggccagcgcg gccccgctcc ggttcatgta cgtctgcggc ttgatcagcg tgacctcgcg
     5401 gcccagcgcg ctgccccgcg cctcgcgggc agccggaacc cgccggaagg gcgggaactt
     5461 ccagcgtgac gccaggcgat cgaccaagag aaacccggca ttgtgccggg tattctcgta
     5521 ctccgtgcct gggttgccga gtccgacgat ggcgcgcagg tcctactcct tctcggcgcc
     5581 ctcgccctct tcctcgggct tcggcttgcg gatgagctcc ggctcggcca ctgcttcgcc
     5641 ggtggcggcc ggggcagcca cttcctcggt ccgcggcgcc acgcacgagc agaccgggag
     5701 gttcggcgga ttgagaacct ccgccttctc gaccttcacg tcgcgcacga agatcgactt
     5761 gccgatcagc aggttggtga cgtccacctc gatgtgggac gggatgtccc ccgggaagac
     5821 caggatctcg aggcggtgga gcacctgatc gagcacgccg ccgaagttgc ggacgccgtc
     5881 cgcggtgccc acgaggtgca ccggcacttc cacggtgatt ttctcgtcgg cccggacttc
     5941 gtagagatcg aagtgcagga tgtcggtggc gcggagcggg tggcgctgga tctcgcggat
     6001 cagcgccttc accggggcct ggccctcgat ggcgacatcg agaacggtgc tggcggccga
     6061 gatgctgccg agcagcttgc ccaggctcgc ggcgtcgacc gacagcgctt cggccggacg
     6121 gccgtggccg tagatcaccg cggggacgct gccggcgcgg cggaggctgc gcgcagcacc
     6181 cttgccggag ccggcacggc gggaagcctg gagagtagcg gactgtgcca tgttctgtcc
     6241 ttcacgtatg ggcggccggg ccgcaccggg tcaatcgaac agcgagctga ccgactggtc
     6301 gctgtgggtg tagccgatcg ccttggccag aagcggtgcg atcgacagga ctttgagctt
     6361 ctcgaacttc cgttccggcg gcagcatgat ggtgttggtc accgccactt ccgtcaccgg
     6421 gctgttctgc agccgttcca ccgccgggcc cgacaggagc gcatgggtgg cgcagcagta
     6481 gatgtcctgc gcgcccagcc gcttgagagc atgcaccgct tccgacatgg tgccgccggt
     6541 atcgatcatg tcatcgggaa tgatgcagtc cttcccgctg acctcaccaa ccacgttcac
     6601 gacttcggcc acgttggccg aggggcgccg cttgtcgatg atcgcgagcg tggcgttgag
     6661 ccgcttcgcg aaaccgcggg ccatcttggc gccacctaca tcggaggcca ccacgaccag
     6721 gtcgcggagc gacttctggc gatagtggtt cacgaacacc ggcgcggcgt acaggtggtc
     6781 gaccggcagg tcgaagaacc cctgcatctg gtgggaatgg aaatccattc cgagcacccg
     6841 gtccgcgccc gccaccggaa ccatgttcgc catcagcttg gcgctgatcg cgacgcgggg
     6901 ctggtccttg cggtcctgac gggcgtaccc gaaataggga atcaccgccg tgatccgggc
     6961 cgcgctggcc cggcgggccg catcgatcag gagcagcagc tccagcaggt tctctgccgg
     7021 gggattggtc ggctggatga cgaacacgtc ccgcccgcgg acgttctcat cgatcttgac
     7081 gaacaattcc ccatcgctga accgctttac cgtcacctgg cagagcggct gtcccagatg
     7141 cgccgcaacc tcctcggaga gcggccggtt ggccgttccc gagagcagga gcatctggct
     7201 gcgggacagg agctcgctca taaaaaatag cccacaagca taatcgggag acggggttag
     7261 gtcaacgagg ggaggcgcat tggccccggt ggattcgaac caccattctc agatccaaag
     7321 tctgatgtcc tgccattgga cgaggggcca gcgggtggga agctaacttg tgggctgggc
     7381 ttgagaaagc tggccggagg ctggaggccg gcggaggcgg gaggtgaatg tcggagctcc
     7441 ggccaccgcc cgcctccggc cttattgagt ctcaaaggtg agggctcgcc caagccgggg
     7501 gctcaactgc atccgcgcat cctccctgtc ccgcgtattt cgatagatcg cgaacagccc
     7561 cgatcccgac cccgtcatcc ggcagagcag gggatgggtc gccgccagcg cctcgaatcc
     7621 ctgcttgagc tccggatgcc gtccgaacag ggcgaactcg aaatcattcc cacccaggcg
     7681 ggccacgttt ccccacccgc ccagggtatc gagatccatc gccaccgcgc cgcgcttggc
     7741 cgagccgtgc cgcccggcgt ccacctggcg ataggcctcc ggcgtgctga tcccgatcgg
     7801 tggaatcagg agcagtccgg gcgacgcggg cagcgggggc aaccggagca ttcgctcgcc
     7861 atggccccag cacagcgcca ggctcccgcc actcaggaag aagggaacgt ccgacccgag
     7921 ccgcgcggcg aactgaagca gttcgtgccg cggcaccgcg ttgttcacca gctgattcac
     7981 cgccgtgagg gcggcggcgg catcgctcga gccgccgccc aggccggcct ggatcggaat
     8041 ccgcttggtg agcgtgagat ggacagcgca gggattcccg gtcgcatcga gcaccatccg
     8101 ggccgcgcgg gtggccaggt tcatctcctc cggcccgcag tccgctcccc ccaccgtgag
     8161 cgacacgccc cgtccttcgc gccgctcggc cttgagctcg tcggccaggt caatgagaca
     8221 gaagagcgat tcgatcccgt ggtagccatc gtcttcccgc gccagcaccc gcaggaagag
     8281 attgagcttc gccggggcgc gaagcgtgac ctcggtggtc acgttccctc acggcgaagt
     8341 gccgcgagcc cgaggccggt gcggaagatc gaccaggcac cgagcagggt aatggggatg
     8401 aaggtggtga tgtggtaagt gagggcgtag gcgagcgcct ggctccgcgg tatcccgtag
     8461 agcgccagca ccgcgatgat cggcagctcg aacgccccgg cgtagcccgg cgtcgaggga
     8521 accgcgatgc cgaacatgat gagtccctgc atcaggagcg cgccggagaa gtcgacgttc
     8581 tggatgtcga aggcgccgag catgacgtag aacgacaccg ccgagacgcc ccagatcacg
     8641 aaggaccaga tgagcacacc ggcaatgcgg gcgggggagc gaagcaccga gaacccgtgc
     8701 cgcactcctt cgatcatccc gatcagcctg taggccagct tgtccgatgg caccagtttc
     8761 cggatcgcgc gctcggctgc gacgggaaac gccacgactg ccccggcgat gacgaggcct
     8821 gccagcacca gggcgcctgc caccgagacg atacgctgga ccccgaaccc cgcgaccgcg
     8881 ttctcgggca ggtgggtcgt gaacagcccg agggcgagga gcgagatcac cgtgagggcg
     8941 tcgaacagcc gctccaccgc aatcgaggcc agcaccgagg tgaaccgcgt ctcggtgagc
     9001 cgggccgcgg cgtaggtgcg caccacctcg cccatgcgga gcggcagggt gttgttggcc
     9061 atgaacccca tggcgatggc gtgccagagc ggagccatgc cgagctgccg gccgtcgtcg
     9121 cccttgagca gcagctgcca gcggaagatg cggagggcga aggtgactgt cgcgagggtg
     9181 acgccgagga cgatcgggag cgatttcgcc gactggacgt agtcgatgac ttcgcggaag
     9241 tggacgccgc ggaacgagaa gtagatcagg accgcggaaa tgaggacccc ggccaggatc
     9301 tgccagaccg gggcgcgccg cctgggtggt ggagccgtca aaggatcaat cgactagcgc
     9361 gagctcgacc aggtcgagca gctcgttcac aagaggctga atggccgccg gcgaggtcga
     9421 cgccgacagg gcggtctgaa tctcgcgccg cacgacatcg gcgcgttcga gcgcgcttcg
     9481 tccccggtag cagagctcgc tgatctccac caccatgggt tcggccgcca ccggcgcagg
     9541 ggccggggca ggggcagcaa ccggggccgg agccggtggt gccatgacgg gcgtgggaat
     9601 gggagcggga gcaggcgcaa ccggagcgac cactgcgggc gccgccaccg gttcgggttc
     9661 cgcgaccgcc ggtccggcga ccagtcgctc gaaatagccg tagctggcgg cgagatccca
     9721 gccatcgaat tcggcctgga ccgcggcgac caccgccacg gattcttcga cggcgattgg
     9781 cacgggcacc ggcagcggca tgggcatcgg cccgggagcc agcgactcga tcggcacgat
     9841 cggcgcactg accag
//
LOCUS       DATIFF010000053         5932 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2006641, whole genome shotgun sequence.
ACCESSION   DATIFF010000053 DATIFF010000000
VERSION     DATIFF010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5932
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2006641"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1496)
                     /locus_tag="VLD58_00880"
     CDS             complement(<1..1496)
                     /locus_tag="VLD58_00880"
                     /inference="COORDINATES: protein motif:HMM:NF012531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52872.1"
                     /translation="MRHRRTRNELARREHDACGVGFVARATGERSHEIVRMALQAVAR
                     VAHRGAASTDNSGDGAGILTQIPTRLFHREAYRLGIRLQPGQPFAVGALFLPAEPEAL
                     DRAIGRVESILERNGLPLLGWRDVPHDPAALGPQARASCPAIRQVFVGCPATINDDDD
                     AWERQLYLARRDMEREAEQDGDLEFFVCSLSCRTIVYKALLTGTQLPAFFPDLRYPEY
                     ESAVAVFHQRYSTNTLPSWPLAQPFRMIAHNGEINTLWGNRNAMAGRETDLASPIWGN
                     DIERLKPVIWARGSDSAGFDNTMELLVRSGRDPLHTVMMLVPQAWEQYGDVEPAIRDF
                     YRFHAHLTEPWDGPAALAFSDGVIAGAATDRNGLRPCRYKVTRDQLVVAGSEVGMVDL
                     DPREVVESGRLGPCEFIAVDLANGTVLRNMDVKRRVASRQPYGQWCRENMQVLEPDAG
                     YRFSQLEERELAETQIAFGYGNEDLRFVLESMGGSGIDPVWSMGDDAP"
     gene            2002..3555
                     /locus_tag="VLD58_00885"
     CDS             2002..3555
                     /locus_tag="VLD58_00885"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: protein motif:HMM:NF002086.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HSB52873.1"
                     /translation="MARQLIIFDTTLRDGEQAPGNTMTPEEKLRLARQLDQLGVDVME
                     AGFPAASEGDYRSVRDIAQEVRRPVIAALARCHERDIDLAGEAIREAARGRLHIFIST
                     SDLHLEHKLKMTREDALELARRSIRQARRYTDDVEFSAEDASRTDIDFLCQVAAMAVA
                     EGATTINLPDTVGYALPAEYAEMFRMVRERVPGSDKVIWSAHCHDDLGLAVANSLAAV
                     EAGVGQVECTINGIGERAGNAALEEIVMASKVRPSLATFHTNINSREIYRTSQLLSYL
                     TGSFPQPNKAIVGRNAFAHEAGIHQHGVLQNGLTYEIIRPESVGIPRSTLVLGKHSGR
                     HALEQRYRELGYELPEEKLAELYKEFTTLADRKREILDEDLLALLHGSFHDAPEEYHL
                     HKLRVVCGSVPAEAEVRMTGPWGGERTAKGKGDGPIAAAFSAISEILERPVEVINLSL
                     RSVTPGRDSVGQVFLQCRIGGKSLSGQGASTDIVEASARALVHALNKERHAERLEATA
                     YDATHLWGV"
     gene            3637..5337
                     /gene="ilvB"
                     /locus_tag="VLD58_00890"
     CDS             3637..5337
                     /gene="ilvB"
                     /locus_tag="VLD58_00890"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005948 - acetolactate synthase complex
                     [Evidence IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HSB52874.1"
                     /translation="MTELLSGAQILCRLLEEQGVEVLFGYPGGAIMPFYHALPESEKL
                     RHVLVRHEQAAAHAADGYARASGRPGVCVATSGPGATNLVTGLATAQMDSSPVVALTG
                     QVPRGMIGRDSFQETDVIGITLPITKHSVMVQDITELADKVREAFYVATEGRPGPVLI
                     DVPKDVQNQKAEWRPDGQAVRRSEPSRPATLPLGRPDALAAAVRLVNEAQRPLIMAGH
                     GIILADAYPELRALAERTGIPVITTLLGISAFPESHPLHLGMPGMHGEVHVNRAIQHA
                     DVIIGIGLRFDDRVTGNTSAFAPQAKIIHIDLDPSEIGKNVPVAVGLVGDAKEITSRL
                     AEAVEPRDCQGWKAEITGFERMRRELYRGEMAPETILEGIHEVTGGRSTIVSDVGQHQ
                     MWVAKLYPYNQPNSHITSGGLGTMGFAVPAAMGVHFARPELPVWAISGDGGFQMNMQE
                     IATMVQEGIPVKMGIFNNGYLGMVRQWQQFFHGRRYSATPIWSPDYVKLAEAYGIAGY
                     RVEHARQIEEAVARATREPGPALVEFMIEQEANVFPMIPPGGSLSEPIEAAPAGAQTP
                     "
     gene            5334..5891
                     /gene="ilvN"
                     /locus_tag="VLD58_00895"
     CDS             5334..5891
                     /gene="ilvN"
                     /locus_tag="VLD58_00895"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005948 - acetolactate synthase complex
                     [Evidence IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HSB52875.1"
                     /translation="MTLPLPSWVVTVLMQDDALALNRAIGIVRRRNLVVSSVSLGPST
                     RIGVSRLTTIVATDESAVERMANQLRKMVGVLEVTVAPEADCITREHALVRVRVTPAE
                     LAALLDTAELYQARVVEESPSEVVFEATASPATLVSLLRALEPFGVLDVVRGGAIALG
                     RPAPPEPAAGRPSLPPVRVARAIPA"
BASE COUNT          948 a         2017 c         2016 g          951 t
ORIGIN      
        1 atcggggcgt cgtcgcccat gctccacacg gggtcgatgc cgctcccgcc catgctctcg
       61 agcacgaagc gcaggtcttc gttgccgtag ccgaaggcga tctgggtctc ggcgagctcc
      121 cgctcctcga gctggctgaa ccggtagccg gcatcgggct ccagcacctg catgttctcc
      181 cggcaccact ggccataggg ctggcgcgag gccacccgcc gcttcacgtc catgttccgg
      241 agcacggtgc cgttggccag gtcgaccgcg atgaactcgc aggggcccag tcggccgctc
      301 tcgaccactt cccggggatc gagatccacc atccccactt ccgagcctgc cacgaccagc
      361 tggtcccggg tcaccttgta gcggcagggg cggaggccgt tgcggtcggt ggccgccccc
      421 gcgataacgc cgtcgctgaa ggccagcgcc gccgggccat cccacggctc ggtgaggtgg
      481 gcatggaatc ggtagaagtc gcggatcgcc ggttccacat cgccgtactg ctcccaggcc
      541 tgaggcacca gcatcatgac ggtgtggagc gggtcacggc ccgagcgcac cagcagctcc
      601 atggtgttgt cgaatcccgc cgagtcgctg ccgcgggccc agatcaccgg cttgagccgc
      661 tcgatgtcgt tgccccagat cggtgaggcg aggtcggtct cacgcccggc catggcgttc
      721 cggttgcccc agagggtgtt gatctcgcca ttgtgggcga tcatccggaa cggctgcgcc
      781 agcggccagc tcggcagggt gttggtcgag tagcgctggt ggaagaccgc caccgcgctc
      841 tcgtattcgg gatagcggag gtcggggaag aacgccggga gctgggtgcc ggtgaggagc
      901 gccttgtaga cgatggtccg gcaggagagc gagcagacga agaactcgag gtcgccatcc
      961 tgctccgcct cccgctccat gtcccgccgg gcgaggtaga gctgccgttc ccaggcgtcg
     1021 tcatcgtcgt tgatggtggc gggacagccg acgaacacct ggcggatggc cgggcagctg
     1081 gcccgtgcct gcgggccaag ggcggcggga tcatggggca cgtcgcgcca gccgaggagc
     1141 gggagcccgt tccgctcaag gatcgactcc acccggccga tagcccgatc gagggcctcg
     1201 ggttcggcgg ggaggaagag cgcccccacc gcgaacggct ggcccggctg aagcctgatg
     1261 ccgaggcggt aggcctcgcg gtggaagagc cgggtcggga tctgggtcag gatgccggcg
     1321 ccgtcgcccg aattgtcggt ggacgccgcg ccccggtggg ccacccgtgc caccgcctgg
     1381 agcgccatgc ggacgatctc gtgggagcgt tcgccggtgg cgcgggcgac aaatcccact
     1441 ccacaggcat cgtgctcgcg tcgggcgagt tcgttccggg ttcggcggtg gcgcatcgtg
     1501 gtctcctcgg ggctgtaaaa gcgaaccggc ccgcgtccct cattcgggag cgggccgggc
     1561 aaggtcaagc gcgttcgcgc gtcaccaccc aggaccgctc cccggaggga gggccttggt
     1621 aataagcaga agggcggcga cgttcagcag gcgcatgtgc ataaaaatac ggcccggcgg
     1681 attggggtca aggccatggg gctggttccc gggctgtaag cccggtcctt gacagacgcc
     1741 ggcccgtccg gtaatctgcc tatcccttcc ggcgcataaa gttaccggcc cggacggaca
     1801 ctcgacctgg attctcgatg cttacgtcgc tcgcgctcct gctcgtcctt attagcctcg
     1861 tgctcgtcct tctggacgct cacggggacc gcggcgcgta cgggcaagca acgtaatcga
     1921 gacagattcg agccctcact gccgcggacc ccgtgaaggt ccgcggtttt tgtttatgtg
     1981 cactcggcac aaggaacccg tatggcgcgc cagctgatca tcttcgatac cacccttcgc
     2041 gacggcgaac aggcccccgg caacaccatg acccccgagg agaagctccg gctcgcccgg
     2101 cagctcgacc agctcggtgt ggacgtgatg gaggcggggt tccccgcggc ctccgaaggc
     2161 gattatcgca gcgtgcgcga catcgcccag gaggtccgcc gcccggtcat cgccgcgctg
     2221 gcccgttgcc atgagcggga catcgacctc gccggcgaag ccatccgcga ggccgcccgg
     2281 ggccggctcc acatcttcat ctccacctcc gacctgcacc tcgagcacaa gctcaagatg
     2341 acgcgggagg acgcgctgga gctggcccgc cgctccatcc gccaggcccg ccgctacacc
     2401 gacgacgtcg agttctcggc cgaggacgcc agccggaccg acatcgactt tctctgccag
     2461 gtggccgcga tggccgtcgc cgaaggggcg accaccatca acctgccgga caccgtcggc
     2521 tacgccctgc ccgccgagta cgccgagatg ttccgcatgg tgcgcgagcg cgtgcccggg
     2581 agcgacaagg tgatctggag cgcccattgc cacgacgatc tgggtctggc cgtggccaac
     2641 tccctggctg ccgtcgaggc cggcgtgggc caggtcgagt gcaccatcaa cggcatcggt
     2701 gaacgggccg gcaacgcggc cctggaagaa atcgtgatgg cgagcaaggt ccggcccagt
     2761 ctcgccacct tccacaccaa catcaacagc cgcgagatct accgcaccag ccagctgctc
     2821 tcctacctca ccggcagctt cccgcagccc aacaaggcga tcgtcgggcg caacgccttt
     2881 gcccatgagg cgggcatcca ccagcacggt gtgctccaga acgggctgac ctacgagatc
     2941 atccggcccg agtcggtcgg gatcccgcgt tccaccctgg tcctggggaa gcactccggc
     3001 cgccacgcgc tggaacagcg ctaccgcgag ctgggctacg agctgccgga agagaagctg
     3061 gccgagctct acaaggagtt caccaccctg gccgaccgga agcgcgagat cctggacgag
     3121 gatctgctgg ccctgctgca cggcagcttc cacgacgcgc cggaggagta ccacctccac
     3181 aagctgcggg tcgtgtgcgg cagcgttccg gccgaagccg aggtccggat gaccgggccg
     3241 tggggcggtg agcgcaccgc caagggcaag ggtgatggcc cgatcgccgc ggccttcagc
     3301 gcgatcagcg agatcctcga gcgtccggtc gaagtgatca acctctcgct ccgctcggtg
     3361 actcccggcc gcgactcggt aggccaggtg ttcctccagt gccgcatcgg cgggaagtcg
     3421 ctctcggggc agggtgcctc gaccgacatc gtcgaggcca gcgcccgcgc cctggtacat
     3481 gcgctcaaca aggagcgtca tgccgagcgg ctggaagcga ccgcctacga cgccacccat
     3541 ctttgggggg tttgaaaagg tcgggggtcg ggggcatgaa gcccacgctc tcaccccccg
     3601 acccctagcc ccaggcctgc accgggactc tgactcatga cggaacttct aagtggcgcc
     3661 cagatcctct gccgcctgct cgaagagcag ggggtggagg tgctgttcgg gtatcccggc
     3721 ggcgccatca tgccattcta ccacgcactg cccgagtcgg agaagctgcg gcatgtgctg
     3781 gtgcggcatg agcaggcagc ggctcacgcc gcagacggtt acgcccgcgc ctccggcaga
     3841 cccggtgtct gcgtggcgac ctcgggccct ggcgccacca atctggtcac cgggctcgca
     3901 accgcgcaga tggacagttc gccggtggtc gcgctgaccg gccaggtgcc gcgcggcatg
     3961 atcggccgtg actcctttca ggagaccgac gtcatcggga ttaccctccc catcaccaag
     4021 cactcggtga tggtacagga catcaccgag ctggccgaca aggtgcgcga ggctttctac
     4081 gtcgccactg agggacggcc cgggccggtg ctgatcgacg tgccgaagga tgtgcagaac
     4141 cagaaggcgg agtggcggcc ggatggccag gcggtgcgcc ggtcggagcc ctcccgtccc
     4201 gccacgctcc ccctcggccg ccccgacgcc ctggcagcgg cggtccgcct ggtcaacgag
     4261 gctcagcgtc ccctcatcat ggccggtcac ggcatcatcc tggccgatgc ctacccggag
     4321 ctgcgcgcac tcgccgagcg caccggcatt ccggtcatca ccacgctgct cggtatcagc
     4381 gccttcccgg agtcgcaccc gctgcacctc ggcatgcccg ggatgcacgg ggaagtgcac
     4441 gtcaatcgcg ccattcagca tgccgacgtg atcatcggga tcgggctccg tttcgatgac
     4501 cgagtcaccg gaaacacctc ggcctttgcg ccgcaggcga agatcattca tatcgatctc
     4561 gatccctccg agatcggcaa gaacgtgccg gtggcggtgg gcctggtggg cgatgcgaag
     4621 gaaatcactt cgcgtctggc tgaggcggtg gagccgcgcg actgccaggg atggaaggcg
     4681 gagatcaccg gcttcgaacg gatgcggcgc gagctctacc ggggcgagat ggcgcccgag
     4741 acgatcctcg agggtatcca cgaggtgacc ggcggccgtt cgaccatcgt gtcggatgtg
     4801 ggccagcacc agatgtgggt ggccaagctc tacccctaca accagcccaa cagtcacatc
     4861 acctcgggcg ggctcggcac catgggcttt gccgtgcctg ccgcaatggg ggtgcacttc
     4921 gcccggccgg agctgccggt ctgggcgatt tcgggtgacg ggggtttcca gatgaacatg
     4981 caggagatcg ccacgatggt gcaggagggg atcccggtga agatggggat cttcaacaac
     5041 ggctatctcg ggatggtgcg gcagtggcag cagttcttcc acggccggcg ctactccgcc
     5101 acgccgatct ggagtcccga ctacgtgaag ctggcggaag cctacggcat cgcagggtac
     5161 cgggtggagc acgcgcgaca gatcgaggag gccgtggccc gcgccacccg cgagccgggt
     5221 cccgcgctgg tggaattcat gatcgagcag gaagccaacg tcttccccat gattccgccg
     5281 ggcggatcgc tgtcggaacc gatcgaggcc gccccggccg gagcgcagac gccgtgaccc
     5341 tgccgctgcc ttcctgggtc gtcactgtcc tgatgcagga cgacgccctg gccctgaacc
     5401 gggccatcgg tatcgtgcgc cgccggaacc tcgtggtgtc gagtgtctcc ctggggccct
     5461 ccacccggat cggggtttcc cggctcacga ccatcgtggc cacggacgaa agcgcggtcg
     5521 agcgcatggc caatcagttg cgtaaaatgg ttggtgtgct ggaagtgacc gtggcgcccg
     5581 aagcggactg tatcacccgg gagcacgccc tggtccgggt ccgggtgacg ccggcggagc
     5641 tggcggcgct gctcgatacc gccgagttgt accaggcgcg ggtggtggag gaatcgccga
     5701 gtgaggtggt gttcgaagct actgcctcgc cggctaccct ggtatcgctg ctgcgcgcgc
     5761 tcgagccgtt tggggttctc gatgtggtgc ggggtggtgc catcgcgctg ggccgtcctg
     5821 cgccacccga gccggctgct ggccgcccga gtcttccgcc ggtccgggtg gcccgggcga
     5881 ttcccgcctg agcgctgcct tctcacttct cacttcttac ttcttacttc tc
//
LOCUS       DATIFF010000054         2905 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_929500, whole genome shotgun sequence.
ACCESSION   DATIFF010000054 DATIFF010000000
VERSION     DATIFF010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2905
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_929500"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            75..407
                     /locus_tag="VLD58_00900"
                     /pseudo
     CDS             75..407
                     /locus_tag="VLD58_00900"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
     gene            418..>2905
                     /locus_tag="VLD58_00905"
     CDS             418..>2905
                     /locus_tag="VLD58_00905"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB52876.1"
                     /translation="MLNQLRAALGERYLLERELGQGGMALVFLARDLRHDRAVALKVL
                     RPELSAVIGADRFLNEIRVTANLQHAHILPLFDSGAADGLLYYVMPYVVGESLRGRLT
                     RERQLPIGDAVRLTMQVASALEYAHRHGVIHRDIKPENILLQEGQALVADFGIALALR
                     KGGGARLTEAGLTLGTPQYMSPEQATGDRDLDARSDLYSLATVLFEMLAGEPPFTGPT
                     AQAVLTKLVTEHPRALREVRDTAPPALETVLHQALATLPADRFAGAGEFAEALAHVPL
                     AVTSSLAVPVTSSPRPRRRVRIALGWSLPVAGALALAAFGGWRLARSPPDPGRIRFVV
                     PTPVPQVDPIENWVPTFALDPAGRILVFGNGEMLQLRALDDFTPRPLAGTGGASMPVL
                     SPDGKWVAFNQDGHLRKLALAGGSVVEIAPADLGPGMTWGADGQIYFSSLGGNGGIWR
                     VPAAGGVPEPVTQVADSAAEHVHAWPQLLPGGKQLLFTVLGPSGGALDSRIVAEVIGS
                     GVRRTLVEHATFGRYLASGQLLYVSNEGTVFAAGYDLRKTVLTGTPQPVLPDVHVASW
                     GGAALLAVADDGTLAYEPGIAAAPQIVRAVDRSGRDLGVIVPAGNLDGIRLSPDGRQI
                     AANVRAPSKNDIWLFGPEGEPGRLTFDDAEDEYGVWAADGREVAYTSSLASQARRLQI
                     IAVAAGTRPRRVLTWPRHLHLAAWSRDGKWLLGHDLSPGGGRDVWAIAADGSDSIPVA
                     AGPASESAPDFSPDGRWVVYQSDESGRMEIFVTSFPDPSAKRQISNNGGRAPRWDPSG
                     GSLYYLEGDRLVGVPISLTSGLRLGPDVVLF"
BASE COUNT          419 a          996 c         1019 g          471 t
ORIGIN      
        1 cccagttccg gggcaagcag aatgtcgtgc tggtgttcta tcgaggcttc tggtgaagct
       61 ggtgcgccag ccagctcggt gagctgaggg aattgctgac ccgggaacag cggcagacca
      121 ccacgatcct ggccgtctcg gtggacagcc ggcaggatct gcagaagatg gtgacgcgaa
      181 tcacccagac cgacggccgg cggccggact acactttcct ctccgatccc ggccaccggg
      241 tgatcaaccg ctacggcctg tggaatccgg cggggagagg gtggccgcat cccacgacct
      301 acgtgatcga ccggcggggt ctggtccgct ggaaactcac ggaggtgaat tacaagatcc
      361 ggccaacgaa cgacatgatt ctgcgggcgc tggccaaggt gccctgaggc caccgccatg
      421 ctcaaccagc tccgtgccgc gctgggagaa cgctacctgc tggagcgcga gctggggcag
      481 gggggaatgg cgctggtgtt cctggcccgc gacctccggc acgatcgcgc ggtcgcgctc
      541 aaggtgctcc ggcccgaact ctcggccgtg atcggggccg atcgctttct caatgaaatc
      601 cgcgtcaccg ccaacctcca gcatgcccac attctcccgc tcttcgactc gggagcggcc
      661 gacgggcttc tctattacgt gatgccctat gtcgtgggcg agtccctgcg gggccggctg
      721 acccgggagc ggcagctccc catcggggat gcggtccggc tgaccatgca ggtcgcgagc
      781 gccctcgaat acgcccaccg gcacggggtg atccaccggg acatcaagcc ggagaacatc
      841 ctgctccagg agggccaggc gctggtcgcc gatttcggga tcgcgctggc gctccggaaa
      901 ggcgggggcg cgcggctcac cgaggccggc ctcacattgg gaacgccaca gtacatgagc
      961 ccggagcagg ccaccggcga ccgggacctc gatgctcgca gcgacctgta ctcgctggct
     1021 accgtgctgt tcgagatgct ggctggcgag ccgcccttca ccggaccgac ggcccaggcg
     1081 gttctcacca agctggtcac cgagcatccc cgggcgcttc gcgaggtgag ggacaccgcc
     1141 cctccggcgc tcgagacggt gctccaccag gccctggcca cgcttccggc cgatcgcttc
     1201 gccggcgcgg gcgagttcgc cgaagcgctc gcgcatgtgc cgctggccgt gacgtcgagc
     1261 ctggcggttc ctgtgacgtc gtcccctcgg ccgcggcggc gggtgcgcat cgcgctcggg
     1321 tggagcctgc cggttgcggg agcactggcc ctggcggcat tcggcggctg gcggctggcc
     1381 cggtcaccgc ccgatccggg ccggatccgc ttcgtcgttc ccaccccggt cccgcaggtg
     1441 gatcccatcg agaactgggt cccgacgttt gcgctcgatc ccgcggggag gatcctggta
     1501 ttcgggaacg gagagatgct ccagctgcgg gccctcgacg acttcacccc ccggcccctc
     1561 gcgggaaccg ggggcgcctc gatgccggta ctctccccgg acgggaagtg ggtggcattc
     1621 aatcaggatg gccatcttcg gaagcttgcc ctcgccggtg gatcggtcgt ggagatcgct
     1681 cccgccgacc tgggcccggg aatgacctgg ggggcggatg ggcagatcta cttctcctcg
     1741 ctcggtggca acggcggaat ctggcgggtg ccggcagcag gcggggttcc cgaaccggtc
     1801 acgcaggtgg ccgacagcgc cgccgagcat gtgcatgcgt ggccgcagct tcttcccggc
     1861 ggcaaacagc tgctgttcac ggtgctcggt ccgagcggcg gcgccctcga ttcccgcatc
     1921 gtggcagagg tcatcggttc gggcgtacgc cgcacgctgg tggagcacgc cacattcggg
     1981 cgctacctgg cctcgggaca gttgctctac gtctccaacg agggcaccgt attcgccgcc
     2041 ggctacgacc tccggaagac ggtgctgacc ggcacccccc agccggtcct tcccgatgtc
     2101 catgtggcga gctggggtgg tgcagcgctg ctggccgtgg ccgacgacgg caccctcgcg
     2161 tacgagccgg ggattgccgc cgcaccccag atcgtgcgcg cggtggatcg ttcgggccgc
     2221 gatctcggtg tcatcgtgcc ggcgggaaac ctcgacggca tccggctctc tcccgacgga
     2281 cggcagatcg ccgccaacgt ccgggcgccg agcaagaacg acatctggct cttcggcccc
     2341 gagggggagc ccggacgcct gaccttcgat gacgccgagg acgaatacgg ggtctgggcg
     2401 gccgatgggc gggaagtcgc ctacacctcg tcgctggcga gccaggcgag gcgactccag
     2461 atcatcgccg tcgccgccgg tacccggcct cggcgggtcc tcacctggcc gcggcacctg
     2521 catctcgccg cctggtcccg cgacggcaag tggctgctgg gccacgacct cagcccgggc
     2581 ggaggccggg atgtctgggc gatcgccgcg gacggatcgg attccattcc ggtcgcagca
     2641 gggccggcct cggagtcggc gccggatttc tcgccggacg gacggtgggt ggtgtatcag
     2701 tcggacgagt cgggccgcat ggagatcttc gtgacctcgt ttcccgatcc ctccgcgaag
     2761 cggcagatct ccaacaacgg cggccgcgcg ccgcgctggg atccctccgg agggtcgctc
     2821 tactacctgg agggagatcg cctggtcggg gtgccgattt cgttgaccag cgggctccgg
     2881 ctgggtcctg atgtggtgct cttcc
//
LOCUS       DATIFF010000055         1639 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_314359, whole genome shotgun sequence.
ACCESSION   DATIFF010000055 DATIFF010000000
VERSION     DATIFF010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_314359"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..866
                     /gene="sigJ"
                     /locus_tag="VLD58_00910"
     CDS             <1..866
                     /gene="sigJ"
                     /locus_tag="VLD58_00910"
                     /inference="COORDINATES: protein motif:HMM:NF007214.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="RNA polymerase sigma factor SigJ"
                     /protein_id="HSB52877.1"
                     /translation="PRLFGIAYRMLGLVEDAEDVVQESYLRWHATDPAVVRNAEAWLV
                     AVTTRIAIDRLRRLTTEREAYLGTWLPEPIGTSAGTPADRHAELVSDLSMAFLVMLER
                     LGPEERAAFLLREVFDAGYDEIARVLERSEAACRQLVHRARERVRGERARFSVPAETR
                     ERLLERLLAALERGDRRELLALVAPNATWDSDGGGKVSATRRTVRGADRIVRMLLGFE
                     RKGRDLVRHNVTWVNGEPAIVTHAGDRLLFTTSVATDGEQLLAFYRVLNPDKLRHLAL
                     FRDSAWSGEDA"
     gene            complement(849..>1639)
                     /locus_tag="VLD58_00915"
     CDS             complement(849..>1639)
                     /locus_tag="VLD58_00915"
                     /inference="COORDINATES: protein motif:HMM:NF012434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate dehydrogenase"
                     /protein_id="HSB52878.1"
                     /translation="ADMKALGLSTGLAGKRVVVQGLGNVGYHAAKFFQEGGAIIVGLA
                     ESEGAITNPNGLDVEQVMAHRRERKSLVGVPGSTALPRREDALELDCDILIPAALERQ
                     ITGENAPRVKAKIIVEAANGPTTPEADEVLTKKGAMVIPDAFINAGGVTVSYFEWVKN
                     LGHVRFGRMSKRFEQGAYGRLLEAVEGVTGRKFTPSEIDRLTHGASEEDLVNSGLEET
                     MVTAYHPIREVWKGHRGKVDLRTAGMIVAIDKVAASYEQLGIFP"
BASE COUNT          228 a          568 c          568 g          275 t
ORIGIN      
        1 ggcccaggtt gttcggcatt gcctaccgga tgctgggttt ggtggaggac gcggaggatg
       61 tggtgcagga gagctacctg cgctggcacg ccaccgaccc ggctgtcgtg cggaacgccg
      121 aggcctggct cgtggccgtg accacccgga tcgcgatcga ccgcctgcgc cggctcacga
      181 ccgagcggga ggcctacctg ggcacctggc tgcccgagcc gatcgggacc agcgccggca
      241 cgccagcgga ccgccatgcc gagttggtgt ccgacctctc catggcattc ctggtgatgc
      301 tcgagcggct tggccccgag gagcgggcgg cctttctcct ccgggaggtg ttcgacgccg
      361 gctacgacga gatcgctcga gtgctggagc ggagcgaggc ggcctgccga cagctggtac
      421 accgcgcccg cgaacgggtc cggggagaac gcgcccgctt cagcgtgccc gccgagaccc
      481 gcgagcggct gctggaacgg ttgctggctg cgctggagcg gggggaccgg cgggagctgc
      541 tggcactggt ggcgccgaac gcgacctggg actcagatgg cggcggaaag gtgtccgcga
      601 cccgccgcac cgtgcggggc gccgaccgga tcgtccggat gctgctgggc ttcgaacgca
      661 aagggcggga cctggtgcgc cacaacgtga cctgggtgaa cggcgaaccc gccatcgtga
      721 cccacgccgg ggatcggctg ctgttcacca cctcggtggc gaccgacggg gagcagctcc
      781 tcgccttcta tcgggttctc aatcccgaca agctcaggca cctggcgctg ttccgggaca
      841 gcgcctggtc aggggaagat gcctagctgc tcgtagctcg ccgccacctt gtcgatcgcc
      901 acgatcatcc cggcggtgcg caggtccacc ttgccgcggt gtcccttcca gacctcacgg
      961 atcgggtggt acgcggtcac catggtctcc tcgagcccgg agttgaccag gtcttcctcg
     1021 ctcgcgccgt gggtcaggcg gtcgatttcc gagggagtga acttgcgtcc ggtcaccccc
     1081 tcgaccgcct cgagcagccg gccgtaggct ccctgctcga accgcttgga catccgtccg
     1141 aagcggacgt gacccaggtt cttgacccac tcgaaatagc tgacggtgac accgccggca
     1201 ttgatgaagg cgtccgggat taccatcgcc cccttcttcg tcaggacctc gtccgcctcg
     1261 ggggtggtgg gaccgttggc ggcttccacg atgatcttgg ccttgacccg cggcgcgttc
     1321 tcgccggtga tctggcgctc gagggcggcc gggatgagga tatcgcagtc gagctccagc
     1381 gcgtcttccc gccggggcag cgccgtgctt ccggggaccc cgaccaggct cttccgctcc
     1441 cgccggtggg ccatgacctg ctcgacgtcg agcccgttgg ggttggtgat ggcgccttcc
     1501 gactccgcca gtccgacaat gatggcgccc ccttcctgga agaacttggc ggcgtggtac
     1561 cccacgttgc cgagcccctg caccaccacc cgcttccccg ccaggccggt cgagagcccg
     1621 agcgccttca tgtcggccg
//
LOCUS       DATIFF010000056         1110 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_775833, whole genome shotgun sequence.
ACCESSION   DATIFF010000056 DATIFF010000000
VERSION     DATIFF010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_775833"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..630)
                     /locus_tag="VLD58_00920"
     CDS             complement(<1..630)
                     /locus_tag="VLD58_00920"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HSB52879.1"
                     /translation="MSPPRILLVRFSSLGDVLLTTPLIRALRSRHPAATITVLTKQVW
                     APLLSANPHLDQVVTLAPGQSLVPLARALRRAGFTDRLDLHASVRTRVLRLLVPGAWH
                     RYNTRRRERRALITLKQDHYRDHLPVPERYFEAARHLDTRPDGAPAELFISPAAEARA
                     EEWLSRSGLDPNLPLVAFAPGAAHATKRWPMRHWQALAEQLGERGLGVVV"
     gene            669..>1110
                     /locus_tag="VLD58_00925"
     CDS             669..>1110
                     /locus_tag="VLD58_00925"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB52880.1"
                     /translation="MPRPRSILWVDDEVESLSSHILFLEEQGFSVERAAHGDDALVLL
                     QRHPYGVVLLDEQMPGRRGLDLFRAIRNIDATMPVVMVTKSEEPATLKDAIGAEISDY
                     LVKPVNPRQVFSVVTRLLEGDRIRQQRLSRDFATRFRELEARRSG"
BASE COUNT          179 a          367 c          400 g          164 t
ORIGIN      
        1 caccactact cccaggccgc gctcgcccag ttgctctgcc agcgcctgcc agtgtcgcat
       61 gggccagcgc ttggtggcgt gggccgcgcc cggcgcaaag gcgaccagcg gcagattggg
      121 atcgagcccg ctgcgggaga gccactcctc cgcccgggct tcggccgcgg gactgatgaa
      181 gagctcggcg ggggcgccat cgggcctggt gtcgagatgc ctcgccgcct cgaaatagcg
      241 ctctggcacc gggaggtgat cgcggtagtg gtcctgcttc agggtgatga gcgcccgccg
      301 ctcccgccgc cgggtgttgt agcggtgcca ggcgccggga accagcagcc gaaggacccg
      361 ggtgcggacg ctggcgtgga gatccagccg gtcagtaaac ccggcccggc gcagcgcccg
      421 cgccagcggg accagtgact ggcccggcgc cagggttacc acctggtcaa gatgggggtt
      481 ggcggagagc agcggggccc acacctgctt ggtgagcacg gtgatcgtgg ccgccgggtg
      541 ccgggaccgc agggcccgga tgagcggcgt ggtcaggagc acgtcgccga gtgaagaaaa
      601 ccgaaccagg agtatgcggg gaggggacac gaccggaaaa taagtcggtg gcggcttata
      661 ataggcccat gccccgtccc cgcagcattc tctgggtcga tgatgaggtg gagagcctct
      721 cctcccatat cctgttcctc gaggaacagg gcttcagcgt ggagcgggcc gcgcacggcg
      781 acgatgcgct ggtcctgctc cagcgccacc cctatggcgt ggttctgctc gacgagcaga
      841 tgccggggcg gcggggcctg gacctcttcc gcgcaatccg taacatcgac gcgaccatgc
      901 cggtggtgat ggtgaccaag agcgaggaac cggccaccct caaggacgcc atcggggctg
      961 agatctccga ttacctcgtc aagccagtca acccgcgcca ggtcttctcg gtggtcaccc
     1021 gcctgctcga gggcgaccgg atccggcagc agcgcctctc ccgcgacttc gccacccggt
     1081 tccgggagct cgaggctcgc cgaagcggtg
//
LOCUS       DATIFF010000057         1290 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_314658, whole genome shotgun sequence.
ACCESSION   DATIFF010000057 DATIFF010000000
VERSION     DATIFF010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_314658"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1290)
                     /locus_tag="VLD58_00930"
     CDS             complement(<1..>1290)
                     /locus_tag="VLD58_00930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52881.1"
                     /translation="VIQTARANNASSLPVYLINVKPSVTLDGTTVASGAAVRMGSAQP
                     LDVVLQDTDGATTVPYQLTAGDESVVGLDGDGISDAVVQNRFTLVPADTAAENLQQVA
                     LHYWMESDILDGLAARGLKVHAVRRLSVGLFSSPLNVAYLFGTPRSGIYQSRIMDVKR
                     SLVGVAGTSADLTRAFVRTSGRSGSFLEGSVFDQLFGRPRGRGVSAMQLLFDAALGNI
                     PVYQVTASNVATVLPLLSVSSAVKADIMNAISSGKTVVVPQSEIQHDNYRGVGYIVED
                     PDTGAAAYLISGGLAGGGLFDCLPDLVPVLVIILAIILLALLFWWLWPIIAGALAGAG
                     AAAPAFASIVAAIVALFVTTGPAYASSGGGSGGGGGGSGSCTCPPCPANPDCEVDPVP
                     PSRPHWPCPGDHWHFQVYNQVPYPDCRCFLSSRQFGG"
BASE COUNT          231 a          433 c          447 g          179 t
ORIGIN      
        1 cagccgccga actgccggct cgacaggaag catcggcagt cgggatacgg tacctggttg
       61 tagacctgga agtgccagtg atcgcccggg cagggccagt gcggccgcga cggcggtacc
      121 ggatccacct cacaatccgg gttggccggg cagggtgggc acgtgcagga cccggaccca
      181 ccccctccgc caccggagcc gcctccgctc gaggcatagg cgggaccggt ggtcacaaac
      241 agcgcgacga tcgccgcgac gatgctcgcg aaagccggcg ccgcggctcc cgctccggcc
      301 agggcgcccg cgatgatcgg ccacagccac cagaacagga gcgccagcag gatgatggcc
      361 aggatgatca ccaggaccgg caccaggtcc ggcaggcagt cgaagaggcc gcctccggcg
      421 aggccgccgg agatgagata ggccgcggct ccggtatccg gatcctccac gatgtagccc
      481 acaccccggt aattgtcgtg ctggatctcg gactggggaa ccaccaccgt cttgccggag
      541 ctgatggcgt tcatgatgtc agccttgacc gccgaggata cgctcaggag cggcaggacc
      601 gttgccacgt tgctcgccgt cacctgatag accgggatgt tgccgagggc ggcatcgaac
      661 aggagctgca tggcggacac cccacgcccc cgcggccgtc cgaagagctg gtcgaagacc
      721 gagccttcca ggaacgagcc gctgcgcccc gaggtgcgca cgaacgcgcg ggtcagatcc
      781 gccgaggtgc cggccactcc gacgagcgac cgcttcacgt ccatgatccg gctctgatag
      841 atgccgctcc gcggggtacc gaagagatag gcgacgttga gcggcgacga gaacaggccc
      901 acggaaagcc ggcgcacggc atggaccttg agcccgcggg cggcgaggcc gtcgaggata
      961 tcggattcca tccagtaatg gagggccacc tgctgcaggt tctcggccgc ggtgtccgcc
     1021 ggcaccaagg tgaagcggtt ctgcaccacg gcatcgctga tgccgtcgcc atcgaggccg
     1081 acgaccgact cgtcacccgc cgtcaattgg tagggcacgg tggtggcccc atccgtatcc
     1141 tgtagcacca cgtcgagggg ctgggcgctc cccatgcgta cggccgcgcc gctggcgacc
     1201 gtggtgccgt cgagggtgac cgacggcttg acattgatca ggtagaccgg cagtgagctg
     1261 gcgttgttgg cgcgcgccgt ctggatcacc
//
LOCUS       DATIFF010000058         1554 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1238134, whole genome shotgun sequence.
ACCESSION   DATIFF010000058 DATIFF010000000
VERSION     DATIFF010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1554
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1238134"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1152)
                     /locus_tag="VLD58_00935"
     CDS             complement(<1..1152)
                     /locus_tag="VLD58_00935"
                     /EC_number="1.2.7.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR03121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran dehydrogenase subunit A"
                     /protein_id="HSB52882.1"
                     /translation="MLLKLSGGRVYDPAHGVDGQVRDVWVRDGRIVAPPPPPERADRE
                     YDVAGRVVMAGAIDLHTHIGGGKLNIARAMLPEDHRGHPLARTGVTRSSCGHAAPGTL
                     ATGYRYAEMGYTACFEPAILPVNARQAHLEMGDTPMVDKGGYAMLGSDDFLLRLMAAG
                     EDQRLINDYVAWTLQATRCIGIKVVNAGGISAFKFNQRMLDVDEPHPYYRVRPRDILR
                     VLSRAVHELGVTHPLHVHGSNLGVPGNAGSTLETIRAAEGLPIHITHIQFHSYGTEGD
                     RKFSSEAARIAETINATPNASCDVGQILFGQTVTASGDTMAQHRNAGLASPRKYVVMD
                     IECDAGCGVLPFRYRDKNFVNALQWAIGLELFLLVTDPWRVFLTTDHPNG"
     gene            complement(1166..>1554)
                     /locus_tag="VLD58_00940"
     CDS             complement(1166..>1554)
                     /locus_tag="VLD58_00940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52883.1"
                     /translation="LTVDNVLLWQTGFGGRTAFGKGHPEHDPHHYSAARMLERGEPDA
                     LLWISSFTAARAPGPAATPTVVLGRAGMTFQREPEVFIPVGTPGVDHPGHLFRTDRVV
                     VLSLRQLRQSNVPSVAEAIAAIEAAL"
BASE COUNT          224 a          534 c          550 g          246 t
ORIGIN      
        1 gccgttgggg tggtcggtgg tgaggaacac ccgccacggg tcggtcacca ggaggaagag
       61 ctcgagcccg atggcccact gcagcgcgtt cacgaagttc ttgtcgcgat accggaaggg
      121 caggaccccg cagcccgcgt cgcactcgat gtccatgacc acgtacttcc gcggactcgc
      181 cagccccgca ttgcggtgct gcgccatagt gtcgccggag gcggtcaccg tctgcccgaa
      241 gaggatctgg cccacgtcgc agctggcgtt gggcgtggcg ttgatcgtct cggcgatgcg
      301 cgcggcctcg gacgagaact tgcggtcgcc ctcggtgccg tagctgtgaa actggatgtg
      361 ggtgatgtgg atcggcagcc cttcggcggc gcggatcgtc tccagcgtcg agcccgcgtt
      421 gccggggaca cccaggttgc tgccgtgcac gtgcagcgga tgagtcacgc cgagctcgtg
      481 caccgcccgg ctgagcacgc ggaggatgtc ccgcggcctc acccggtaat acgggtgcgg
      541 ctcatccacg tcgagcatcc gctggttgaa cttgaaggcg gagatgccgc cggcgttgac
      601 gactttaatg ccgatgcacc gggtggcctg cagcgtccag gccacgtagt cgttgatcag
      661 ccgctggtct tcccccgccg ccatcagacg gagcaggaaa tcgtcgctcc ccagcatggc
      721 gtacccgccc ttgtccacca tcggggtgtc gcccatctcg agatgagcct ggcgggcgtt
      781 gaccggaagg atggccggct cgaagcaggc cgtgtagccc atctccgcgt agcggtaccc
      841 ggtggccagg gttcccggcg cggcgtggcc gcaggaggac cgggtcaccc cggtgcgcgc
      901 cagcggatgg ccacggtggt cctccggcag catcgcccgg gcgatgttca gcttgccgcc
      961 gccgatgtgg gtgtggaggt cgatcgcgcc ggccatcacc actcggccgg cgacgtcata
     1021 ctcccggtcg gcgcgctccg gcggcggcgg cggcgcgacg atccgcccgt cgcgcaccca
     1081 gacgtcgcgg acctggccgt cgacgccgtg ggccggatcg tagacccggc cccccgagag
     1141 cttcagcagc atggagcctg gtctcctaca acgcggcttc gatggcggcg atcgcctcgg
     1201 ccacgctcgg aacgtttgat tgccggagtt gcctgaggga gagcaccacg acccggtcgg
     1261 tccggaacag gtggccggga tgatccacgc ccggggtccc caccgggatg aacacctccg
     1321 gctcgcgctg gaaggtcatc cccgcgcgcc cgagcaccac cgtcggcgtg gcggccggtc
     1381 cgggcgcccg cgcggccgtg aagctggata tccagagcag cgcatcgggc tcgccccgct
     1441 cgagcattcg cgcggccgag tagtgatgcg gatcgtgctc ggggtgtccc ttcccgaagg
     1501 cggtccggcc gccgaacccg gtctgccaca gcagcacgtt gtccaccgtg agat
//
LOCUS       DATIFF010000059         1271 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1391958, whole genome shotgun sequence.
ACCESSION   DATIFF010000059 DATIFF010000000
VERSION     DATIFF010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1271
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1391958"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..679
                     /locus_tag="VLD58_00945"
     CDS             <1..679
                     /locus_tag="VLD58_00945"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF015692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HSB52884.1"
                     /translation="PWAEAGMPAPYAGNGAAMRAAPLGVVYAEPWRLRQVVVAQARVT
                     HQEPRCAAGAMAIAGAAGIAARREPIDAAAFLAELGSMIAPVDPEFARLLLEMPAWSQ
                     GEPEEAVGVMIERGLEPESGDGWRGISSGVVASVCWSLYAFLRSPDDFPAAVCDAIAV
                     GGDTDTIAAMTGALVGARMGLEALPAALAGSLTDQGTWTTDELIVLSRLVASLELEGP
                     HGWLDMS"
     gene            860..1069
                     /locus_tag="VLD58_00950"
     CDS             860..1069
                     /locus_tag="VLD58_00950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HSB52885.1"
                     /translation="MERVRLEISGMSCGHCVHAVDGALRAVPGVRRAEVGLGSAVVDF
                     DPATATPEDLSQAVIAAGYEARVTL"
     gene            1083..>1271
                     /locus_tag="VLD58_00955"
     CDS             1083..>1271
                     /locus_tag="VLD58_00955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52886.1"
                     /translation="MSPTDWLVIAGGVALIAWVNWYFFFAERKTVVAAGGAGGVQQVT
                     VTVRGGYEPSNIRVTAGRP"
BASE COUNT          185 a          382 c          497 g          207 t
ORIGIN      
        1 tccctgggcg gaggccggta tgcccgctcc ctatgccggc aacggagccg ccatgcgggc
       61 ggcgcccctc ggggtggtgt acgcagaacc ctggcgtctg cggcaggtgg tagtcgccca
      121 ggcgcgggta acccatcagg agccgcgttg cgcggccggt gccatggcca tcgccggggc
      181 ggccgggatc gccgcccggc gggagccgat cgatgctgcc gcgttcctgg cggagctcgg
      241 gagcatgatc gcgccggtgg atcccgagtt tgcccgcctg cttctcgaaa tgcccgcgtg
      301 gtcgcagggc gagccggagg aggcggtggg tgtgatgatc gagcgggggc tggagcctga
      361 gagtggggat gggtggaggg ggatctcctc gggcgtggtg gcgagcgtct gttggagtct
      421 gtacgcgttc ctccggtcac cggacgactt cccagccgcc gtgtgcgacg ccatcgcggt
      481 gggcggcgac accgacacca ttgccgccat gacgggtgct ctcgtcggcg cccggatggg
      541 cctcgaggca ctgccggcgg cgctggcggg cagtctcacg gaccagggga catggacgac
      601 ggacgagctg atcgtgcttt cccgcctggt ggccagcctc gagcttgaag ggccccacgg
      661 ctggctcgac atgagctgag gctccgtcgg cccacgcgcg gacgggcttg ggtagtcctc
      721 aaaacctctc ccagaacagc gagttacggc aggtgattct ggcccggccc ctcgagttga
      781 cataggggtg gggggtatct acattgatcc catcgaccta ttggagcgcg ggaaagccga
      841 tggccaatcg ggaggaacga tggaacgggt aagactcgaa atttccggga tgagctgcgg
      901 gcattgcgtg cacgccgtgg acggggccct ccgggcggtt cccggcgtgc ggcgggccga
      961 ggtcggcctg gggtcggccg tggtggattt cgacccggcg acggcgacgc ccgaggatct
     1021 cagtcaggcg gtgatcgcgg ccgggtacga ggcgcgggtg acgctttaaa ggagcgatgc
     1081 acatgagccc aacggactgg ctggtaatcg cgggcggtgt cgctctcatc gcctgggtca
     1141 actggtactt cttcttcgcc gagcggaaga ctgtcgtggc cgcgggtgga gctggcgggg
     1201 tgcagcaggt gaccgtcacc gtgcgcggcg gatacgagcc cagcaacatc agagtcacgg
     1261 cgggccggcc g
//
LOCUS       DATIFF010000060         1315 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_776520, whole genome shotgun sequence.
ACCESSION   DATIFF010000060 DATIFF010000000
VERSION     DATIFF010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1315
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_776520"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1315)
                     /locus_tag="VLD58_00960"
     CDS             complement(<1..>1315)
                     /locus_tag="VLD58_00960"
                     /EC_number="6.2.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030729 - acetoacetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019287 - isopentenyl diphosphate
                     biosynthetic process, mevalonate pathway [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetate--CoA ligase"
                     /protein_id="HSB52887.1"
                     /translation="LGRQRTLTYAELRGEVARWRAALNASGVVAGDRVAAFLPNLPET
                     IIAMLAATSVGAVWSSCSSDFGERAVLDRFGQIRPRILVTVDGYRYAGKTIDLRERLA
                     GVMAALPDTERAVVVPYLGGAAEQGSSEAGERRSSGAGEQDLPADRRFVWLDDWLAAG
                     AANADRLTAGPPVRFPFDHPVYILYSSGTTGLPKAIVHGAGGTLLQHLKELVLHTDLT
                     RDDRIFYFTTCGWMMWNWLVSSLAVGATVVLYDGAPMAPEKDILWQMAESERITVFGT
                     SAKYLALCEKEGLAPGETRDLGSLRAILSTGSPLANHSFDYAYARVKRDLHLASISGG
                     TDIVSCFALGNPTAPVWRGELQCRGLGMAVDVLGPAGESLVGQAGELVCTRPFPSMPV
                     AFWDDPGGAKYRAAYFQHRPGVWRHGDWAERTSHDGLIIYGRSDAT"
BASE COUNT          207 a          463 c          447 g          198 t
ORIGIN      
        1 gggttgcatc gctccggccg tagatgatca gcccgtcatg gctggtgcgt tcggcccagt
       61 cgccgtggcg ccagactccg ggccgatgct ggaagtacgc ggcccgatac ttcgcgccac
      121 cgggatcgtc ccagaaggcg accggcatgc tggggaaggg ccgggtgcag accagttctc
      181 cggcctgacc caccaggctc tcgcccgctg ggccgaggac gtctaccgcc atgcccaggc
      241 ctcggcactg cagctcgccc cgccacaccg gcgcggtcgg gttgcccagc gcaaagcacg
      301 agacgatgtc ggtcccgccg ctgatgctgg cgaggtggag atcccgcttg acccgcgcgt
      361 aggcgtagtc gaagctgtgg ttggcgaggg ggctgccggt ggagagaatg gcccggagcg
      421 agccgagatc ccgggtttct cccggggcaa ggccttcctt ttcgcacaag gcgaggtact
      481 tggcgctggt gccgaagacc gtaatccgct cggactccgc catctgccag aggatgtcct
      541 tctccggcgc catcggggcg ccgtcgtaga gcaccacggt ggccccgact gccaggctcg
      601 agaccagcca gttccacatc atccacccgc aggtcgtgaa gtagaagatc cggtcgtcgc
      661 gagtgaggtc ggtatgcagc accagctcct tcaggtgctg cagcaaggtc ccgccggctc
      721 catgcacgat cgctttgggc agccccgtcg tacccgagga gtagaggatg tacaccgggt
      781 gatcgaaggg aaagcggacc ggcggcccgg cggtcaggcg gtcagcgttg gcggcgccgg
      841 cagcaagcca gtcgtccagc cagacgaaac gtcggtcggc cgggagatcc tgctcccctg
      901 ctccgctgct ccgccgctcc cccgcttcgc tgctcccctg ctccgctgct ccgccgaggt
      961 acggcaccac caccgcccgc tcggtgtccg gcaaggcggc catcacgccc gctaaccgct
     1021 ccctgaggtc aatcgtcttg ccggcgtagc ggtagccgtc caccgtgacc agaatcctgg
     1081 gtcggatctg gccgaaccga tccagcacgg cgcgctcgcc gaagtcggaa gagcaggagg
     1141 accacaccgc gccgacgctg gtcgcggcca gcatcgcgat gatggtctcc ggcaggttcg
     1201 gcaggaaggc ggccacgcgg tcgcccgcga caacgccgga ggcgttcagc gccgcccgcc
     1261 agcgcgccac ttcgccccga agctcggcgt aggtcagggt tcgctggcgg ccaag
//
LOCUS       DATIFF010000061         1405 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_930558, whole genome shotgun sequence.
ACCESSION   DATIFF010000061 DATIFF010000000
VERSION     DATIFF010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1405
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_930558"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="VLD58_00965"
     CDS             complement(<1..317)
                     /locus_tag="VLD58_00965"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HSB52888.1"
                     /translation="MPIWLRSAIFTLVFPGTVAGVVPWLLITGSHRLPLCLGAARWLG
                     LAPLVLGLGIYVATAWEFGFAGRGTPAPWDPPRNLVDTGLYAWVRNPMYVGVLLCILG
                     EGML"
     gene            complement(450..932)
                     /locus_tag="VLD58_00970"
     CDS             complement(450..932)
                     /locus_tag="VLD58_00970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52889.1"
                     /translation="MAGETEYPFVHSSRIAIVQARHETLFLGGRVVAPRHLVLGVLKT
                     LPAPEFEALFPGAEAFERLCAELGADTRPAPLIAEEVSYHQAAQEALAGAIRAAASDP
                     RGPEILPIHLLIGVLRPCGVSDGVPTPSGAAADALVTAGIDLARLEGLLSLRPEHGTA
                     "
     gene            complement(1011..>1405)
                     /locus_tag="VLD58_00975"
     CDS             complement(1011..>1405)
                     /locus_tag="VLD58_00975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52890.1"
                     /translation="RFAGRGPHHPTGLPLGFVFFDASAIRYGTSSDTLPVSLLLDDSL
                     RLRLGNAVKSPVQTEGVRPSLTVNVILTRAAYLALVASHTATFRWPAQELSLADREIS
                     SLRSLYRVCLCAPAGIPGHDGHVKAPSE"
BASE COUNT          245 a          457 c          522 g          181 t
ORIGIN      
        1 agcatcccct cacccaggat gcagagaagc actcccacgt acatcgggtt ccggacccag
       61 gcatacagtc cggtgtccac cagattcctg ggcggatccc agggcgcagg cgtgccgcga
      121 ccggcgaacc cgaactccca cgcggtggcg acatagatgc cgaggcccag gacgagcggt
      181 gcgagcccca accagcgggc ggcgccgagg caaagcggca gtcggtggga cccggtgatg
      241 aggagccagg gaaccacgcc ggcgactgtt cccggaaaca cgagcgtgaa aatggccgaa
      301 cgaagccaga tgggcatccg ccgatctcgc cggttcactc tgtcccgatg aggcctccgg
      361 cgctcgacgt gtggcgccgg tgtggggccg gggcgcgtaa gctgccggcc ggggcggcgg
      421 gcggcaaggg gctcccccgc ggcggcgcgt caggctgttc cgtgctccgg acgcagggag
      481 agcaagccct ccagcctggc gaggtcaatg ccggcggtga ccagcgcgtc ggccgcagcg
      541 ccggagggtg ttgggacacc atcgctgaca ccgcaagggc gcaggactcc gatcagtaga
      601 tggatcggca aaatttccgg cccgcgcggg tccgaggcag ccgcccggat cgcgccggcc
      661 agtgcctcct gggcggcctg gtgatagctg acttcctcgg cgatcagggg agccggcctc
      721 gtgtcggcgc ccaactccgc acagagccgc tcgaacgcct cggcaccggg aaagagcgcc
      781 tcgaattccg gcgcgggcag cgtcttgagg acccccagga cgaggtgcct gggcgcgact
      841 acgcgccctc ccaggaagag cgtctcatga cgagcctgga cgatcgcgat ccgggacgaa
      901 tggacgaacg gatactcggt ctcccctgcc atcagctggc gctccggcga gattcgtggt
      961 ccggcccggc gcaggccggg tgcgagccgg gtccggccgg ggtcctcacg ctactcggac
     1021 ggtgccttga catggccgtc gtggccgggg attccggccg gggcacagag gcacacccgg
     1081 tacagcgagc ggaggctgct gatctcgcga tcggcaagag acagctcctg ggccggccat
     1141 ctgaaggtgg ccgtgtggct ggccaccagg gcgagatacg ccgcgcgtgt gagaatgacg
     1201 ttgacggtca gggaggggcg tacgccctcg gtctgaacgg gcgacttgac cgcgttgccg
     1261 agtcgtagcc ggagggagtc gtccaggagc agagaaaccg gcagtgtatc cgaggaggtc
     1321 ccgtagcgaa tcgcggaggc gtcgaagaaa acgaacccga gcggcagtcc cgtcgggtga
     1381 tgcggccccc ggccggcgaa gcgga
//
LOCUS       DATIFF010000062         5868 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_777000, whole genome shotgun sequence.
ACCESSION   DATIFF010000062 DATIFF010000000
VERSION     DATIFF010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5868
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_777000"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1445
                     /locus_tag="VLD58_00980"
     CDS             <1..1445
                     /locus_tag="VLD58_00980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSB52891.1"
                     /translation="ATSRYLENRNPADTRDLIGRFPDSGPGDVDRAVQAAARAFERWR
                     RVPAPARGDLLRRLGDLLAANKDSLADSMTREMGKVLAETRGDVQEGIDTAYYAASEC
                     RRLFGHTVPSELRDKWAMSWRRPIGVCGLITPFNFPLAIPTWKMFPALACGNTVVLKP
                     SEDVPHTSHRLVELALEAGFPPGVINLVHGRGELAGQALVSHPDVRALSFTGSSETGS
                     LIGEVAGRLHKRLSLEMGGKNALIVMDDADLDLALEGVLWAAFGTTGQRCTATSRLLL
                     HRKVHDRFLARLVERAANLKLGDGRKPGVDVGPLIHSAARDKVERYVEIGRDSKAELV
                     TGGERPRGKAFANGWFHQPTIFAGVRPGDRLEQEEIFGPVLSVVKVGSLDEAIRINNG
                     VRYGLSSALYTRNVQAAFRALEDLDTGITYINAPTIGAEAHLPFGGVKQTGNGHREGG
                     WEVFEFYSETKVGYVDYSGRLQRAQIDNYD"
     gene            1545..2408
                     /locus_tag="VLD58_00985"
     CDS             1545..2408
                     /locus_tag="VLD58_00985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSB52892.1"
                     /translation="MRVGTGKRGSSSFDEGSLDQYLREISRYPLITQDEEVELAKRIR
                     AKDPEALDKLVRSNLRFVVSVAKKYQNQGVSLSDLINEGNLGLIRAAHKFDETKGIKF
                     ISYAVWWIRQAILQALAEQSRIVRVPLNRAGTLHRIGKRSSMLLQELGREPTPAEIAE
                     GMDISMEEVQKTLSISQNHLSLDAPLTPGEDNKLLDYLPDTQNAGPDSDTFEKALTES
                     IEEVLSTLKEREAKILRLYFGLDGPEPMTLEEIGSQLGITRERVRQIKEKALTRLRHV
                     SRARALESFLS"
     gene            complement(2410..3450)
                     /gene="metX"
                     /locus_tag="VLD58_00990"
     CDS             complement(2410..3450)
                     /gene="metX"
                     /locus_tag="VLD58_00990"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: protein motif:HMM:TIGR01392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004414 - homoserine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HSB52893.1"
                     /translation="MTVATIVPPTLEGHTGDLVLGDFRTERGGLISNARLRYQVLGDP
                     EAGRRHGWRLVFHALTGSARVQDWWGPVIGPGLPLDPAHGPILSANLLGSCYGSTSPA
                     ESSDGSFPALSTADLARAHLPLIKHLGIEHISLVSGGSLGGMVALQWGLLTPVPVDRL
                     VIFAAPERTSAQAIAWNAAQRMAIEADPAWAAGRYLPGEGPAAGLAAARAIAMITYRS
                     VVEFDQRFGRKDTRSPGRFDVDHYLRRHGQKLVDRFDARSYVSLMGAMDSHDVGPTEA
                     AGRHTAASVGEVIGVGIDTDILYYPWEVRRWVEAYARSGANARYEEITTPYGHDAFLI
                     EFEQVGRILQGR"
     gene            complement(3447..4505)
                     /locus_tag="VLD58_00995"
     CDS             complement(3447..4505)
                     /locus_tag="VLD58_00995"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52894.1"
                     /translation="MSDRPAPAPVVIKLGGDALASPQRIVAQAARVARLAADGPVVAV
                     ASARRGVTDHLLGLAREITAEAGRSGAARKNTDDRCSRAERDRAVATGEVVSAALLAL
                     ALNQLGIEAVSLDAREAGVLSHGHFGDARIRRVAPRRVEQLLAKRIVPVVTGFQGWQQ
                     GRVATLGRGGTDTSAVALTIALKGERTLFVKEAHGLRTADPKLVPEAERIPEAPHQFL
                     SVLTSAGSKVVQAEAARLAESHGVRLEFCSLESATPDTVVHAGAAAAGLRAVASHTVD
                     GHGQVTVLAGQSADFQYEAEALRAALQSAAIPVVEIQPAANGLRFLVPADQTTGAVRA
                     LHAAFIGCRPPQNARRAS"
     gene            complement(4502..>5868)
                     /locus_tag="VLD58_01000"
     CDS             complement(4502..>5868)
                     /locus_tag="VLD58_01000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase/cysteine synthase family
                     protein"
                     /protein_id="HSB52895.1"
                     /translation="HSVTSTHPEEVVMPYHPETLAIHAGQVVDPATNSRAVPIYATTS
                     YVFNSTEHAANLFALKEFGNNYTRIMNPTTDVFEKRITELEGGAAALAVASGQAAETL
                     TILNLARAGDNIVSSQTLYGGTYNLFAYTLPKWGITTKFVDIHNLASVRAAIDAGTRA
                     LYVETIGNPRLDVPDFAALADIAHEAGIPFVVDNTFGAATLARPIKHGADIVVHSATK
                     WIGGHGTAIGGVVVDAGKFDWTSPKAKARFPEFSSPDPSYHGLVYTEAFGNLSFILKL
                     RVQLLRDLGPALSPFNAFLFLQGLETLPLRIKRHSENALALARWLQQDKRVEWVSYPG
                     LESHAEHKNATRYLEGGFGGVLTFGVKGGNAAARAVIDRVKLYSLLANVGDAKSLIIH
                     PASTTHEQLTAEQQRATGVVPELIRISAGLEDVRDLIADLDQALGDSAQVASTATSAV
                     GAAR"
BASE COUNT          977 a         1959 c         2023 g          909 t
ORIGIN      
        1 cggccaccag ccggtacctc gagaatcgca acccggccga cacccgggac ctgatcggcc
       61 gattccctga ctccggtccg ggcgacgtcg accgcgcggt gcaggctgcg gcgcgcgcct
      121 tcgaacgctg gcggcgagtg ccggcgcccg cccggggtga cctgctgcgg cggctgggtg
      181 atctcctggc cgcgaacaag gactccctgg ccgacagtat gacccgggaa atgggcaagg
      241 tcctggcgga gacccgcggc gatgtgcagg agggaatcga taccgcctac tacgccgcga
      301 gcgagtgccg gcggctgttt ggccacacgg tgccgtccga gctgcgggac aagtgggcca
      361 tgagctggcg ccgtcccatc ggcgtgtgcg gcctcatcac accgttcaac tttcccctcg
      421 cgattcccac ctggaagatg ttccccgcgc tggcctgcgg aaacacggtg gtgctcaagc
      481 cgtcggagga tgtcccgcac acctctcacc gcctggtcga gttggcgctc gaggcggggt
      541 ttccacctgg cgtcatcaat ctggtacacg ggcgcgggga gctcgcgggg caggcgctgg
      601 tttcgcatcc cgacgtgcgg gcgctctcct tcaccggatc gagcgagacc ggatccctga
      661 tcggcgaggt ggcgggacgg ctccacaagc ggctctcgct cgagatgggt gggaagaacg
      721 ccctgatcgt gatggatgac gcggaccttg acctggcgct ggagggtgtc ctctgggccg
      781 cattcggcac caccgggcag cgctgcaccg caaccagccg gctgcttctc caccggaagg
      841 tgcacgaccg tttcctggcg cgactggtcg aacgcgccgc gaatctcaag ctgggtgacg
      901 gccggaagcc gggcgtagac gtcggcccac tgattcactc ggccgcgcgg gacaaggtgg
      961 agcggtacgt cgagatcggc cgggactcga aggcggagct cgtcacaggg ggcgaacgcc
     1021 cacgcggcaa ggcgttcgct aacgggtggt tccaccagcc gacgatcttc gccggggtgc
     1081 gccccggcga ccggctggag caggaggaga tcttcggccc ggtgctgagt gtggtgaagg
     1141 taggctcgct cgacgaggcg attcgcatca acaacggggt acggtacggg ctctcgagcg
     1201 cgctctacac caggaacgtg caggccgcgt tccgggcctt agaggacctc gacaccggca
     1261 tcacatacat caacgctcct accatcgggg cagaggcaca tctgccgttc ggcggtgtca
     1321 agcagaccgg caatggacac cgcgagggcg gctgggaggt cttcgagttc tattccgaga
     1381 cgaaggtggg gtacgtcgac tactccggaa ggctgcaacg cgcccagatc gacaactatg
     1441 attaactggc gcttgacccc cgcttgcgcc cctttttggg cccggctaag gttctgatag
     1501 gtgctccttc ctgccggcag tgaggcaaat ctctaatgcg tcccatgcga gtcggtactg
     1561 gcaagcgcgg atcgtcgtca ttcgacgagg gctcgctcga tcagtacctc cgggaaatca
     1621 gcaggtatcc gctgatcacc caggacgaag aagtcgagct ggccaagcgc attcgggcga
     1681 aggacccgga ggcgctggac aagctggtgc gcagcaacct gcgcttcgtc gtctcggtgg
     1741 cgaagaagta ccagaaccag ggcgtctccc tctccgacct gatcaacgag ggcaacctcg
     1801 gcctcatccg cgcggcccac aagttcgacg agaccaaggg catcaagttc atctcctacg
     1861 cggtctggtg gattcgtcag gcgatcctcc aggcgctggc ggagcagagc cgcatcgttc
     1921 gtgtgcccct caaccgggcc ggcacgctgc accggatcgg caagcgctcc tccatgctcc
     1981 tccaggaact gggccgcgag cccacccccg ccgagatcgc cgagggaatg gacatctcga
     2041 tggaggaggt gcagaagacc ctgtccatca gccagaacca cctctcgctc gacgccccgc
     2101 tcacgccggg cgaggataac aagctcctcg actatctccc cgacacccag aacgccggcc
     2161 cggacagcga caccttcgag aaggcgctga ccgagtcgat cgaggaagtc ctctcgacgc
     2221 tcaaggaacg ggaagccaag atcctgcgcc tctatttcgg cctcgacggc cccgagccga
     2281 tgaccctgga ggagatcgga agccagctcg gcatcacccg cgagcgggtc cggcagatca
     2341 aggaaaaggc cctcacgcgg ctcagacatg tcagccgggc gagggcgctg gagagcttcc
     2401 tgtcgtaggc tagcggccct gcagtatccg tcccacctgc tcgaactcga tcagaaacgc
     2461 atcatggccg tacggggtgg tgatctcctc atagcgcgca ttggcgccgc tccgggcgta
     2521 ggcctcgacc cagcggcgca cttcccacgg atagtacagg atgtcggtgt cgatcccgac
     2581 cccgatcacc tcgccgactg acgccgcggt gtgccggccc gcggcctccg tggggccgac
     2641 atcgtgggaa tccatcgcac ccatcaggct cacgtagctt cgcgcgtcga accggtccac
     2701 cagcttctgg ccgtggcggc gcaggtagtg gtcgacatcg aagcggcccg gactccgggt
     2761 atccttccgc ccaaaacgct ggtcgaactc caccacggag cggtaggtga tcatcgcgat
     2821 ggcacgtgcg gccgcgagtc ccgccgccgg cccctcgccg ggcaggtacc ggcccgcggc
     2881 ccaggccggg tccgcctcga tggccatccg ctgcgccgcg ttccaggcga tcgcctgcgc
     2941 actggtgcgc tccggcgcgg cgaagatcac caggcggtcg accggcaccg gcgtaaggag
     3001 tccccactgg agcgcgacca tgccgccgag cgagccgcca ctcaccaggg agatatgctc
     3061 gataccgagg tgcttgatga gcggaaggtg ggcccgcgcg agatcggcag tgctcagggc
     3121 aggaaagctt ccgtcgctgc tttccgcggg gctggtggag ccgtaacaac tgcccagcag
     3181 gttggcggag agaatcggtc cgtgcgccgg gtcgagtggg agtccgggcc cgatcacggg
     3241 gccccaccag tcctggacgc gggcgctgcc ggtgagcgca tggaagacca ggcgccagcc
     3301 atgtcgccgg ccggcctcgg ggtcgcctaa cacctggtag cggagccggg cgttggagat
     3361 caggcccccg cgctcggtcc ggaagtctcc caggaccaga tcgccggtgt ggccttcgag
     3421 cgtcggggga acgatggtcg ccaccgtcac gaggcccgcc gcgcgttctg cggcgggcgg
     3481 cagccgatga acgcggcgtg gagcgcccga accgcgccgg tggtctgatc ggcggggacc
     3541 aggaatcgaa gcccattcgc cgcgggttgg atctccacca cgggaatcgc ggccgactgc
     3601 aatgcagccc gcagggcctc ggcctcgtac tggaagtcgg ccgactggcc ggcgaggacg
     3661 gtgacctgcc cgtgcccatc gaccgtatgc gacgcgacgg cccggagacc agccgcggct
     3721 gcaccggcgt ggacgacggt gtcaggtgtc gcgctctcga gcgagcagaa ttcgaggcgc
     3781 acgccgtgtg attcggccag ccgggccgcc tcggcctgca cgaccttgga gccggccgac
     3841 gtcagcaccg acaggaactg gtgcggggcc tcgggaatcc gctcggcctc gggcaccagc
     3901 ttgggatccg cggtgcggag cccgtgcgct tccttcacga agagcgtgcg ctcgcccttg
     3961 agcgcaattg tcagggcgac cgcggaggta tcggtgccgc cgcgcccgag cgtggctacc
     4021 cgtccctgct gccagccctg aaagcccgtg accacgggca cgatccgctt cgccagcagc
     4081 tgttcaaccc gccggggggc aacccgccgg atcctggcat ccccgaagtg gccgtgactc
     4141 aggacaccgg cctcgcgggc gtcaagcgaa accgcctcga tgccaagctg attcagggcc
     4201 agcgccagca atgcggcgga gaccacctcg ccggtcgcca ccgcccgatc ccgttcggcc
     4261 cggctacatc ggtcgtcggt gttcttccgg gccgcgcctg acctgcccgc ctcggccgta
     4321 atctcccgcg cgaggccaag caggtgatcg gtcacacccc gccgggcgct ggccacggcc
     4381 accacagggc cgtccgcggc gagccgagcc acccgcgcag cctgcgccac gatccgctgg
     4441 ggcgacgcca gcgcgtcacc ccccagcttg atcaccaccg gcgccggcgc tggccgatcg
     4501 ctcatcgggc ggctcccacc gcgctggtgg cggtactggc cacctgagcg ctgtcgccga
     4561 gcgcctggtc gaggtcggcg atgaggtcgc ggacatcctc gaggccggcc gagatccgaa
     4621 tcagctccgg caccacgccg gtggcgcgct gctgctccgc agtgagctgc tcatgggtgg
     4681 tcgaggccgg gtggatgatg agcgacttgg catcgcccac attggcgagc agggaataga
     4741 gcttgacccg gtcgatgacc gcgcgagccg cggcgttgcc gcccttcacg ccgaaggtca
     4801 gcactccgcc aaatccgccc tcgaggtacc gggtcgcgtt cttgtgctcg gcgtgggact
     4861 cgagtccggg ataggagacc cactcgaccc gcttgtcctg ctgcagccac cgcgccaggg
     4921 cgagggcgtt ctccgaatga cgcttgatcc ggagcggcag ggtttcgagg ccctgcagga
     4981 agaggaacgc gttgaaagga gacagcgccg gaccgaggtc gcgcagcagc tgcacccgga
     5041 gcttcaggat gaacgacagg ttgccgaacg cctcggtgta gaccaggccg tggtaggacg
     5101 ggtcggggct cgagaattcg ggaaagcgag ccttggcctt ggggctggtc cagtcgaact
     5161 tcccggcgtc gaccaccacg ccaccgatgg cggtgccgtg gccaccaatc cacttggtag
     5221 ccgaatggac gacgatgtca gcaccgtgct tgatggggcg ggccagggtg gccgcgccga
     5281 aggtgttgtc gaccacgaac gggattcctg cctcgtgggc gatgtcggca agggcggcaa
     5341 agtcgggcac atcgagccgg gggttgccga tggtctcgac gtacagggcc cgggtgccgg
     5401 cgtcgatcgc cgcgcggacg gaggcgagat tgtgaatatc cacgaacttc gtggtgatgc
     5461 cccacttggg cagggtgtat gcaaagagat tgtaggtccc gccatagagc gtctgggagg
     5521 agacgatgtt gtcgccggcc cgggccaggt tcaggatggt cagggtttcc gccgcctgac
     5581 cgcttgccac cgccagggcg gccgcaccac cctcgagttc ggtgatccgc ttctcgaaca
     5641 cgtccgtggt ggggttcatg atccgcgtgt agttgttgcc gaactccttc agcgcgaaca
     5701 ggttcgccgc gtgctcggtg ctgttgaaga cgtagctcgt ggtggcgtag atcggcacgg
     5761 cgcgcgaatt ggtggcgggg tccaccacct ggccggcgtg aatggcgagc gtttccggat
     5821 ggtacggcat gacaacctcc tcggggtgcg tgctggtgac ggaatgca
//
LOCUS       DATIFF010000063         3795 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1854244, whole genome shotgun sequence.
ACCESSION   DATIFF010000063 DATIFF010000000
VERSION     DATIFF010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3795
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1854244"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..338)
                     /locus_tag="VLD58_01005"
     CDS             complement(<1..338)
                     /locus_tag="VLD58_01005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HSB52896.1"
                     /translation="MSPAFRSVIFDCDSTLSAIEGIEELAVGHRAEVERLTGLAMQGA
                     VSLESIYGRRLDLIRPSRKAVDRIGRMYIDRMIPGAPEVVRSLLAEGIRVFILSGGLL
                     PAVRALGHHLG"
     gene            complement(335..1726)
                     /locus_tag="VLD58_01010"
     CDS             complement(335..1726)
                     /locus_tag="VLD58_01010"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HSB52897.1"
                     /translation="MPLAARLPRTRDLRELLALALPVISVQLGMMAMGVVDTIMVGHL
                     SPAALAAVALGNVYYFGASIFGMGALMALDPVVAQAVGANDPEGVARGVQRGMVLAVL
                     LCIPTALVLLPAPAVLTWLRQPPEVAPLAGAYAQVSIPGTIGVFAFVVLRQSLQALGR
                     MRPILVTIVVANLVNAVLNWLLIFGHGGFPAMGAVGSAWASTIARLFMAVLLPLLAWP
                     LLRQTVLPLRRAVLEPRPLLRMLRLGAPIGAQHQLEYGVFGVVGLLMGSMGTVQVAGH
                     QVALNLASITFMVPLGLSSAAAVVVGRAVGRNDAESAWESAQGALLVAVAFMGTTAIC
                     FLLLPQPLARIYTVAPEVLAVAGALIPLAGVFQVFDGIQVTSIGILRGLGDTRTPMII
                     GVLGFWLVGLPVSLLLAFRLNLGAPGLWWGLVLGLVFVASLLLARVRWKLRQPLRRVL
                     IDHSSEFPVQSVG"
     gene            complement(1863..3539)
                     /gene="hutU"
                     /locus_tag="VLD58_01015"
     CDS             complement(1863..3539)
                     /gene="hutU"
                     /locus_tag="VLD58_01015"
                     /EC_number="4.2.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016153 - urocanate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HSB52898.1"
                     /translation="MTTAIRSDAARVIRAPRGTALSARSWLTEAPLRMLMNNLDPEVA
                     ERPQDLVVYGGIGRAARDWQSFDQIVATLKRLGADETLLIQSGKPVGVFRTHADAPRV
                     LLANSNLVPRWATWDHFNELDRRGLMMYGQMTAGSWIYIGSQGIVQGTHETFAEMGRR
                     HYGGDLSGRWILTAGLGGMGGAQPLAATMAGASCLAIECQDSRIAMRLRTRYLDVEAK
                     DLDHALALIDQAVRERKAVSVGLLGNAAEVLPELLRRGVRPDAVTDQTSAHDPVNGYL
                     PKGWTVEQWEERRKSDPKSVERAARQSMAEHVRAMLAWHAQGVPTFDYGNNIRQMAKE
                     EGVANAFDFPGFVPAYIRPLFCRGVGPFRWVALSGDPDDIWKTDQKVKELTPGNVHLH
                     RWLDMAKERIAFQGLPARICWVGLGDRHRLGLAFNEMVARGELKAPVVIGRDHLDSGS
                     VASPNRETEAMRDGSDAVSDWPLLNALLNTASGATWVSFHHGGGVGMGFSQHAGVVIV
                     CDGTPEAGRRIERVLWNDPATGVMRHADAGYPEAIACAREKGLDLPGILA"
     gene            complement(3536..>3795)
                     /locus_tag="VLD58_01020"
     CDS             complement(3536..>3795)
                     /locus_tag="VLD58_01020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52899.1"
                     /translation="MADNVAAIVGIELLAAVQGCDFRAPLRSSQPLERVRAMLRREVP
                     HLEDDRYLHPDILIATSLVRSGRLIDAAGSDLVPVLFARRS"
BASE COUNT          689 a         1273 c         1319 g          514 t
ORIGIN      
        1 ccgagatggt ggccgagtgc acggaccgcg ggcagcagtc cgccggagag aatgaacacc
       61 cggatccctt cggcgagcag cgagcgaacc acctcgggtg ctcccgggat catgcgatcg
      121 atgtacatcc tcccgatgcg atccaccgcc ttgcgcgaag gccggatgag gtcgaggcgc
      181 cggccgtaga tcgactcgag cgacaccgcc ccttgcatcg cgagcccggt gagacgttcc
      241 acctcggcgc ggtggccgac ggcgagttcc tcgatgccct cgatggccga gagagtcgag
      301 tcgcagtcga agatgacgga gcggaaggcg gggctcatcc gacgctctgg accgggaact
      361 cggagctgtg atcgatgagg acccgacgga gcggctgccg cagcttccat cgaacccggg
      421 cgaggagcag cgaggccacg aagacgagcc cgagcaccag cccccaccag aggccgggcg
      481 cgccgaggtt cagccggaac gcgagcagca gcgagaccgg gagtcccacc agccagaagc
      541 cgaggacgcc gatgatcatg ggggtccggg tatcgccgag tccccgcaga atgccgatgc
      601 tggtcacctg gatcccgtcg aagacctgaa acacgccagc gagaggaatc agtgcccccg
      661 cgaccgccag gacttcgggc gcgacggtgt agatccgtgc cagcggctgg ggaagcagga
      721 ggaagcagat cgcggtggtg cccatgaagg caaccgccac gagcagagcg ccctgggccg
      781 attcccacgc agactccgcg tcgttccgcc caacggctcg gcccaccacg actgctgccg
      841 cactcgaaag cccgagcggc accatgaagg tgatggacgc gaggttgagc gcgacctggt
      901 gacccgccac ctggacggtg cccatgctcc ccatgaggag accgacgacc ccaaagaccc
      961 cgtactccag ctggtgctgg gccccgattg gcgcgcccag ccgaagcatg cgcagcagtg
     1021 gacggggctc cagcaccgcg cgccggagcg ggagcacagt ttgtcgcagg agcggccatg
     1081 ccagcagtgg cagcagcacg gccatgaaca ggcgagcgat ggtgctggcc caggcggagc
     1141 cgacagcgcc catggccggg aacccaccgt ggccgaagat caggagccag ttgaggacgg
     1201 cgttgaccag attggcaacc acgatggtga ccaggatggg ccgcatgcgg ccgagtgcct
     1261 ggagactctg ccgcagcacc acaaaggcga agacgccgat ggtgccggga atactcacct
     1321 gggcatacgc gcccgcgagc ggggcgacct caggcggctg acgcagccac gtcagcactg
     1381 ccggcgcagg aagcagcacc agtgcggtcg ggatgcagag cagcacggcg aggaccatgc
     1441 cccgctgcac tccccgggcg acgccctccg gatcgttggc accgaccgcc tgggcgacaa
     1501 ccggatcgag ggccatcagc gcccccatgc cgaagatcga agccccgaag tagtacacgt
     1561 tgccgagagc cacggccgcc agggccgccg gcgagaggtg gcccaccatg atggtgtcga
     1621 ccacacccat tgccatcatg ccgagctgca cgctgatgac tgggagagcg agggccagca
     1681 gctcgcgcag atcgcgggtg cgtggcaggc gggcggcgag gggcaatgtt cggggtctag
     1741 aggtctaggg tcgagggtcg agggtcaagg gtcacgagta cgggtcacgg gtcacgggtc
     1801 gagggtcacg ggtcacgagt acgggtcacg ggtcatgggt cgagggtcga gggtcaggcg
     1861 tgtcaggcca ggatccccgg gaggtccagc cccttctccc tggcacaggc gatcgcttcc
     1921 ggatagcccg cgtccgcgtg gcgcatgacg ccggtggccg ggtcgttcca gagcacccgc
     1981 tcgattcggc gtcccgcttc cggcgtccca tcgcagacaa tgaccacccc tgcatgctgc
     2041 gagaatccca tcccgacccc gccaccatga tggaacgaga cccaggtggc accgctggcg
     2101 gtgttcagca gcgcgttcag gagaggccag tcggagacgg cgtcggagcc gtcccgcatc
     2161 gcctcggttt cgcggttggg tgaggccacc gagcccgagt cgagatgatc gcgcccgatc
     2221 accaccggag ccttgagctc accccgggcg accatctcgt tgaacgcgag tcccagccgg
     2281 tggcggtcgc cgagtccgac ccagcagatg cgggcgggga gcccctggaa agcgatccgc
     2341 tccttcgcca tgtccagcca gcgatggagg tggacgttgc ccggggtcag ctccttcacc
     2401 ttctggtcgg tcttccagat gtcatccggg tcgccggaga gcgccaccca ccggaatggg
     2461 cccacccctc ggcagaacag cggccgaata tacgcgggca caaagccggg gaaatcgaag
     2521 gcgttcgcca cgccctcttc cttggccatc tggcggatgt tgttgccgta gtcgaacgtg
     2581 ggaacgccct gtgcgtgcca ggccagcatg gcgcgcacgt gctccgccat cgactgtctc
     2641 gctgcgcgct ccaccgactt ggggtcactc ttccgccgtt cctcccactg ctccacggtc
     2701 cagcccttcg gcagatagcc gttcaccgga tcgtgggccg aggtctggtc ggtgacggca
     2761 tcgggccgga caccacggcg aaggagctcg gggaggactt cggccgcatt accgaggagc
     2821 ccgactgaca ccgccttccg ctcccggacc gcctggtcga tcagcgcgag tgcatggtcc
     2881 aggtccttcg cctcgacatc cagatagcgg gtccgaagcc gcatcgcgat acgcgagtcc
     2941 tggcattcga tcgcgaggca cgaggcgccc gccatcgtgg ccgcgagcgg ctgcgccccg
     3001 cccatcccgc cgaggccggc ggtaaggatc cagcggccgg agaggtcgcc accgtaatgg
     3061 cgccggccca tctcggcgaa ggtctcgtgg gtcccctgca cgatcccctg gctgccgatg
     3121 tagatccagg agccggcggt catctggcca tacatcatga gcccgcggcg atcgagctca
     3181 ttgaagtggt cccaggtggc ccagcgcgga accagattgg agttcgcgag cagcacccgc
     3241 ggagcatcgg cgtgagtgcg gaagacaccc accggcttgc ccgactggat cagcagggtc
     3301 tcgtcggcgc ccagccgctt gagcgtggcc acgatctgat cgaaactctg ccagtcgcgc
     3361 gcggcgcggc caatgccgcc atagaccacc agatcctggg gccgctcggc gacctcggga
     3421 tcgagattgt tcatcagcat ccggagcggc gcctcggtga gccagctccg ggcgctcaag
     3481 gcagtgccgc gcggggcgcg aatcacccgg gcagcgtcgg aacggatggc agtcgtcatg
     3541 agcggcgtgc gaagagcacg ggaacaaggt cggagccggc cgcatcgatg agccggccgc
     3601 tcctgaccag ggaggtggcg atcagaatat cgggatggag atagcgatcg tcttcgagat
     3661 gcggcacctc gcggcgcagc atcgcgcgga cccgctcgag gggctgactc gagcggagcg
     3721 gcgcgcggaa atcacacccc tgcaccgcgg cgagcagctc gatgcccacg atggcggcga
     3781 cgttgtcggc catcg
//
LOCUS       DATIFF010000064         1345 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1700292, whole genome shotgun sequence.
ACCESSION   DATIFF010000064 DATIFF010000000
VERSION     DATIFF010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1345
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1700292"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..542
                     /locus_tag="VLD58_01025"
     CDS             <1..542
                     /locus_tag="VLD58_01025"
                     /inference="COORDINATES: protein motif:HMM:NF020442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FRG domain-containing protein"
                     /protein_id="HSB52900.1"
                     /translation="NDWEVLVAAQHHGLPTRLLDWTYSPLVAAHFATVDASVTTDRAV
                     WRLDWKAVHRFFQLPELALLIQDLGGIFGQERPFTPTSLFAAPAGSREFACMIEPPSL
                     DIRIVAQSAAFTLCSDKRQPFDRFLDRHGLGGALTKLVIPAGEAGRIRDQLDLVSVDE
                     RRLFPDLDGVAAHLRRYYS"
     gene            complement(577..>1345)
                     /locus_tag="VLD58_01030"
     CDS             complement(577..>1345)
                     /locus_tag="VLD58_01030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52901.1"
                     /translation="PFIGSEGAPGGAASTMIDGGLSQNVLGLGSYAMVGNLVYGEFSI
                     YRSAFQGSAAPSSATGAIHGVAPYWRLALQKEWEHQYLMVGTFGLHTSLFPDVLTGPR
                     DTYSDVGADAQFESAVGTGNLVVRGSWIHERETLDATFGAGGSANSKNTLKALRLNAS
                     YYPRQWLGVTGGWFDTRGSSDAGLYAPDPVDGSASGSPKTDGFVGEVDVNPWENTRLG
                     LQYTAYANFNGGKTNYDGSGRDASGNNTLFAFAWLAF"
BASE COUNT          196 a          482 c          447 g          220 t
ORIGIN      
        1 tgaacgactg ggaggtgctc gtggccgccc agcaccacgg gctgcccacc cgtctgctcg
       61 actggacgta ctccccgctg gtcgcggcgc acttcgccac ggtggacgcc tcggtgacga
      121 ccgaccgggc ggtctggcgg ctggactgga aagcggtgca ccgctttttc cagctgcccg
      181 agctggccct gctgattcaa gacctcgggg gaatcttcgg acaggagcgg cccttcacgc
      241 cgacgtcgct cttcgccgcg ccggccggga gccgcgagtt cgcctgcatg atcgagccgc
      301 cgtcgctcga catccggatc gtggcgcagt cggcggcgtt cacgctctgc tccgacaagc
      361 gccagccgtt cgaccggttc ctcgaccggc acggcctggg cggcgcgctc accaagctgg
      421 tcattcctgc cggagaggcg ggccgcatcc gggaccagct cgacctcgtg agcgtggacg
      481 aacggcggct ctttcccgat ctcgacggcg tggcggccca cctgcggcgc tactactcct
      541 gagcgcgcgg ggcccggccg ccacggccca gcccgcctag aaggcgagcc aggcgaacgc
      601 aaacagcgtg ttgttccccg acgcgtcccg cccggagccg tcgtagttgg tctttccgcc
      661 gttgaagttg gcgtaggccg tgtactgcag gcccagacgg gtgttctccc aggggttcac
      721 gtccacttct ccgacgaatc cgtccgtctt gggactgccg ctggcgctgc catcgacggg
      781 gtcgggcgcg tacaggccgg cgtcgctcga tccccgggta tcgaaccagc cgccggtcac
      841 gccgagccac tgcctggggt agtagctggc gttcaggcgc agggccttga gcgtgttctt
      901 cgagttggcc gacccacctg ccccaaaggt cgcgtccagt gtctcgcgct cgtggatcca
      961 gctgccccgg accacgagat tgccggtgcc gaccgcggac tcgaattggg catcggcgcc
     1021 cacatccgaa tacgtgtcgc gcggcccggt cagcacatcc gggaacaggc tggtgtgcag
     1081 gccgaaggtt cccaccatga gatactggtg ttcccactcc ttctgcaggg ccaaccgcca
     1141 gtagggcgcc accccgtgga tcgcgccggt cgccgacgac ggcgccgccg agccctgaaa
     1201 ggcggagcgg tagatcgaga actcgccgta caccaggttg ccgaccatcg cgtagcttcc
     1261 cagccccagc acgttctgcg aaagtccacc gtcgatcatg gtgctggcgg cgcccccggg
     1321 cgccccctcg gaaccgatga agggg
//
LOCUS       DATIFF010000065         1275 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_623605, whole genome shotgun sequence.
ACCESSION   DATIFF010000065 DATIFF010000000
VERSION     DATIFF010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_623605"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..330)
                     /locus_tag="VLD58_01035"
     CDS             complement(<1..330)
                     /locus_tag="VLD58_01035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52902.1"
                     /translation="MTRRAMPPRAILVIDVGGTHVKILATGRATPRKCDSGARMTAGR
                     MVAAVKRLAAGWAYQVITIGYPGPVLHGKIAAEPHNLGGGWVGFDFARAFGCPVKIMN
                     DAAMQALG"
     gene            complement(327..>1275)
                     /locus_tag="VLD58_01040"
     CDS             complement(327..>1275)
                     /locus_tag="VLD58_01040"
                     /inference="COORDINATES: protein motif:HMM:NF014800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52903.1"
                     /translation="GRSLASARELNATIHTVFDEARVFRIDHYLGKEPVQNLLLFRFA
                     NTFLEPIWNRHYVESVQITMAESFGVQGRGRFYEEAGAIRDVVQNHMLQVVGFLAMEP
                     PVGTYHESIRDEQVKVFRSIRPLSADDLVRGQFQGYRAEPGVAPTSTVETFAAVRLHI
                     DSWRWDGVPFLIRAGKCLPLTTTEVRVTLKRPPLYKIGPEGRNYVRFRLSPDVTIAIG
                     ARVKQPGELMVSEPTELRVVHQPDGDEMDPYERLLGDVMAGDGTLFARQDEVEAAWAI
                     VEPILGNSTPARLYQPGTWGPPEAAQLAADVGGWHDPAP"
BASE COUNT          192 a          435 c          444 g          204 t
ORIGIN      
        1 gcccagcgcc tgcatcgcgg cgtcgttcat gatcttcacc gggcagccga acgcccgggc
       61 gaaatcgaag ccgacccagc cgccgccgag gttgtgcggc tcggcggcaa tcttgccgtg
      121 cagcaccggc ccggggtagc cgatggtgat aacctggtat gcccagcccg cggcgaggcg
      181 tttgaccgcc gccaccatcc tgccggccgt catccgggca cccgaatcgc atttgcgcgg
      241 cgtcgcccgg ccggtagcga ggatcttcac gtgcgtgccg ccgacatcaa tcaccaggat
      301 cgctcgtggt ggcatggcgc ggcgggtcat ggcgccgggt cgtgccatcc gcccacgtcc
      361 gccgccagct gggccgcttc gggggggccc caggtaccgg gctggtacag acgcgccggc
      421 gtcgagtttc ccaggatcgg ctccacgatc gcccaggcgg cttcgacctc gtcctgacgg
      481 gcgaagagcg tcccatcgcc ggccatgacg tcgcccagca gccgctcgta cgggtccatc
      541 tcgtcgccgt cgggctggtg gaccacccgg agctcggtcg gctcggagac catcagctcg
      601 cccggttgct tgacgcgggc gccgatcgcg atggtgacgt cggggctgag ccggaagcgc
      661 acgtagttcc ttccttcggg accgattttg tagagcggcg gccgcttgag ggtgacgcgc
      721 acctcggtgg tggtgagggg gagacatttg ccggcgcgga tcaggaatgg caccccgtcc
      781 cagcgccacg agtcgatgtg cagccgcacg gcggcgaagg tctcgaccgt ggaggtcggc
      841 gcgacgccgg gctcggcgcg gtacccctga aactgcccgc gcaccagatc gtccgcgctg
      901 agcggccgga tggaccggaa caccttcacc tgctcgtcgc ggatggattc gtggtaggtg
      961 cccaccgggg gctccatggc gaggaacccc acgacctgga gcatgtggtt ctgcaccacg
     1021 tcgcgaatcg cgccggcctc ctcgtagaac cggccgcgtc cctgaacccc gaagctctcg
     1081 gccatggtga tctgcacgct ctcgacgtag tggcggttcc agataggctc gaggaacgtg
     1141 ttggcgaacc ggaacagcag gagattctgc accggctcct tgccgagata gtgatcaatg
     1201 cggaacaccc gcgcctcatc gaacacggtg tggatggtgg cgttcagctc ccgggcggag
     1261 gccaggctcc ggccg
//
LOCUS       DATIFF010000066         1165 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1085583, whole genome shotgun sequence.
ACCESSION   DATIFF010000066 DATIFF010000000
VERSION     DATIFF010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1085583"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..273
                     /locus_tag="VLD58_01045"
     CDS             <1..273
                     /locus_tag="VLD58_01045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52904.1"
                     /translation="AATVQVSPAELAAAGSEPTTTESGTSSNRWAILRDGILSTSPST
                     GSTVVGRTGFAPVSRQPGKPDLPEATGSDAPGGSLFGTIVIIITRP"
     gene            270..>1165
                     /locus_tag="VLD58_01050"
     CDS             270..>1165
                     /locus_tag="VLD58_01050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52905.1"
                     /translation="MIAPILRAAGAATLLAALPVAALAQTNLYPTASAVSGVEVRQYG
                     FDSKFGIDHVRQIAVPIAVAVPIGRRFSFDIGTWYASTSVKSATGTETFSSLTDTQLR
                     LAYVLGNDALVASVVVNLPTGKETTTQQQFGIAAGASSNFLLFPVNTYGTAASVTPSL
                     AAATSFGDWNVGISGSLRWTGEYQPFSDGTDPDLKYQPGLEGRVRLGIDRLVGKSRFT
                     IGGTFSTFSNDEITPGTGSGATYSPGNRFLVDASLVAPAGSGTVSVYAWNYHRTESNS
                     SSGAIGGKENILTGGVAGAFPLG"
BASE COUNT          178 a          424 c          372 g          191 t
ORIGIN      
        1 gccgcgaccg tgcaggtcag cccggctgag ctcgccgccg ccggcagcga gccgacgacg
       61 accgagtccg ggacgtcgtc caaccgctgg gcgattctgc gcgatgggat tctgagcacc
      121 agcccgagca ccggctccac cgttgtgggc cgcaccggct ttgctccggt ctcgcgccag
      181 ccgggcaagc ccgaccttcc cgaggccacc ggctccgacg cgcctggtgg gagcctcttc
      241 ggtaccatcg tcatcatcat cacccgccca tgatcgcgcc cattctccgc gccgccgggg
      301 ctgccacgct gctggctgcc ctgccggttg cggccctggc ccagaccaac ctctatccca
      361 ccgcctcggc ggtttcgggg gtggaggtcc ggcagtacgg cttcgacagc aagttcggca
      421 tcgaccatgt ccgccagatc gcggttccca tcgccgtcgc cgtgccgatc ggacggcgct
      481 tctcgttcga catcgggacc tggtatgcca gcacttcggt gaagagcgcc accggcaccg
      541 agaccttctc gagcctcacc gacactcagc tgcggctggc gtacgtgctg ggcaacgacg
      601 cgctggtggc gagcgtggtg gtgaacctgc ccaccggcaa ggagaccacc acccagcagc
      661 agttcggcat tgcggcgggc gcctcctcca acttcctgct cttcccggtg aatacctacg
      721 gcaccgcggc ctcggtcacg ccgagtctcg cggcggcgac ctcgttcggc gattggaacg
      781 tgggcatttc ggggagcctg cgctggaccg gggagtacca gccattcagc gacggcaccg
      841 accccgacct caagtaccaa cccgggctcg agggtcgggt ccgactgggc atcgaccggc
      901 tggtcggcaa gagtcgcttc accatcggcg ggaccttcag caccttctcg aacgacgaga
      961 tcacccccgg taccggcagc ggcgcgacct actctccggg gaatcgcttc ctggtagacg
     1021 caagcctggt tgctcccgcc gggagcggga cggtgtcagt ctacgcctgg aattaccacc
     1081 gcaccgagtc caactcctcc agcggcgcca tcggtggcaa ggagaatatt ctgactggcg
     1141 gcgtagccgg ggcgtttccg ctggg
//
LOCUS       DATIFF010000067         1890 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_931159, whole genome shotgun sequence.
ACCESSION   DATIFF010000067 DATIFF010000000
VERSION     DATIFF010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_931159"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            170..1375
                     /locus_tag="VLD58_01055"
     CDS             170..1375
                     /locus_tag="VLD58_01055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52906.1"
                     /translation="MAALLWLAIGAGGLVLVAPQLAAGNIFDPRVFALTHVITLGVIT
                     TAISGALYQLFPVAMGRAVRNLRVAHLTFWLLQAGIVLLVTGFWVTSGHLQGCGWVAI
                     SLSVALFGVNLISRSLNTQPDQLIGWYVGAGYLALVAALGLGALRVGETLGYWHVDRL
                     VMIASHFHLAGVGFATLVAIGVGHRMLPMFLVSHGFPRWPFRWSGVLAALGLVAFVTG
                     KYAALGLLVRAGGLTIAAAGCIYAYLAEEYFRRRMRRALDPGLAHAAVAHLFLVAGIL
                     TGLRLLFEPSDFAPQLWAAYAVLLLLGWLVLLIVGVLYKILPFLTWLHIFGPRMGEAE
                     LPTVADLTRPAWGWVSLGCLAAGLSLLAPAIALGSGAVARLGALGVALGVALVLAQGA
                     RVLSMRYAR"
     gene            1372..1671
                     /locus_tag="VLD58_01060"
     CDS             1372..1671
                     /locus_tag="VLD58_01060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sulfur cluster assembly factor"
                     /protein_id="HSB52907.1"
                     /translation="MTAPGRLTDEARRADILALLRRVIDPELGLDIVALGLVYEVVFE
                     DDNVTVDMTLTTRGCPMQGPIIEGVRRVLGEVTWLDTARVRLVWDPPWTPDRIQR"
     gene            1668..>1890
                     /locus_tag="VLD58_01065"
     CDS             1668..>1890
                     /locus_tag="VLD58_01065"
                     /inference="COORDINATES: protein motif:HMM:NF021520.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2249 domain-containing protein"
                     /protein_id="HSB52908.1"
                     /translation="MTFAPAVRLDVRPVLASGGEPFEQIMSAAGRLPPGGTLELTAPF
                     EPVPLYPVMRRRGFTGRAEVRGPAEWVVTF"
BASE COUNT          229 a          660 c          633 g          368 t
ORIGIN      
        1 gtgataatta cggtcggctg cgtcggagat accggcgcac gccagcccgg tttcccgaca
       61 ggatcgaatg accacggcag cgccccctcg tcgcccgcca ccgctcccag tccccggcct
      121 gacgaccggc gttcatccac caccgttcct cctgccgggc gaacacttcg tggccgcgct
      181 cctgtggctt gccatcggcg ccgggggact ggtcctggtc gccccccaac tggccgccgg
      241 gaacatcttc gatccccggg tgttcgccct gacccatgtg atcaccctcg gcgtgatcac
      301 caccgcgatc tctggagcgc tgtaccagct cttcccggta gctatgggcc gtgcggtccg
      361 gaatctccgg gttgctcacc tgaccttctg gctgctccag gccggcatcg tcctgctggt
      421 gacgggattc tgggtcacgt ccgggcatct ccagggatgt ggctgggttg cgatctcgct
      481 gtcggtggca ctcttcggtg tgaacctgat ctcccgctcg ctcaataccc agcccgacca
      541 gctgatcggc tggtatgtcg gcgccggcta tctcgcgctg gtggcggcgc tcggactcgg
      601 cgccctccgc gtgggcgaga ctctcgggta ctggcacgtc gaccgcctcg tgatgatcgc
      661 cagccatttc catctcgcgg gcgtgggatt cgccacgctg gtagcgatcg gggtcggaca
      721 ccggatgctc ccgatgttcc tggtgagtca cggcttcccc cgctggccct tccggtggag
      781 cggcgtgctg gctgccctcg gcctggtcgc gttcgtcacc gggaagtacg ccgctctcgg
      841 gctcctcgtg cgggcaggcg ggctcacgat tgccgctgcc ggatgcatct atgcctatct
      901 ggccgaggag tatttccgcc ggcggatgcg gcgcgcgctc gatcccggac tggctcacgc
      961 cgcagtggcc cacctgttcc tcgtcgccgg catcctgaca ggattgcggc ttctctttga
     1021 gccgagtgac ttcgcgccgc aactctgggc cgcctacgca gtgctgctac tgctgggatg
     1081 gctggtcctg ctgatcgtcg gggtgctcta caagattctc ccgttcctca cctggctcca
     1141 catcttcggg ccgcggatgg gtgaagccga gctgccgacg gtggcggacc tgacccgccc
     1201 ggcgtggggc tgggtctcac tcggctgtct cgcagcaggc ctctccctgt tggcgccggc
     1261 gatcgcactc ggctcgggcg ctgtcgctcg ccttggcgcg ctcggcgtgg cgctcggcgt
     1321 ggcactcgta ctggcacagg gcgcgcgggt gctaagcatg aggtacgcgc gatgacggcg
     1381 cccgggcggc tcacggacga ggcgcgccgc gcggatatcc tggcgctgct ccggcgggtg
     1441 atcgaccccg agctggggct cgacatcgtc gcgctgggcc tggtgtacga ggtcgtgttc
     1501 gaggacgaca atgtcaccgt cgacatgaca ctcacgactc gcggttgtcc catgcagggc
     1561 ccgatcatcg aaggcgtccg tcgggtcctc ggtgaggtca cctggctcga caccgccagg
     1621 gtccgcctgg tctgggaccc accctggacg cccgatcgga tccaacgatg acttttgcac
     1681 ccgcggtacg cctcgatgtg cggccggtgc tcgcctcggg cggcgagcct ttcgaacaga
     1741 tcatgtccgc ggccggacga ctcccgccgg gcggcacact ggaactcacg gctcccttcg
     1801 agccggtgcc actctatccg gtgatgcggc ggcggggctt caccggccgg gccgaggtca
     1861 ggggcccggc tgagtgggtg gtcacgtttc
//
LOCUS       DATIFF010000068         1682 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1392965, whole genome shotgun sequence.
ACCESSION   DATIFF010000068 DATIFF010000000
VERSION     DATIFF010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1682
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1392965"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..403
                     /locus_tag="VLD58_01070"
     CDS             <1..403
                     /locus_tag="VLD58_01070"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSB52909.1"
                     /translation="GSLEGRSAMNLNQVTLPALEVGPAVPFYQQLGLRLIVDDLPHYV
                     RFECPDGGSTLSVERVTERGAGPAPVVYFECEQLDQMVERLRAAGVRFDSLPTDQPWL
                     WREARLQDPAGNAVCLYWAGRNRRDPPWRVT"
     gene            593..922
                     /locus_tag="VLD58_01075"
     CDS             593..922
                     /locus_tag="VLD58_01075"
                     /inference="COORDINATES: protein motif:HMM:NF020317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GYD domain-containing protein"
                     /protein_id="HSB52910.1"
                     /translation="MPKYLWQVSYTAQGAQGLQKDGGSARRAMVKRLTEQAGGKLEAF
                     YFALGESDAYIIADLPDANTAMAVSLAVNAAGAAHLRTVPLLSPEDMDAAVKKTVDYR
                     PPGAGGR"
     gene            944..1489
                     /locus_tag="VLD58_01080"
     CDS             944..1489
                     /locus_tag="VLD58_01080"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HSB52911.1"
                     /translation="MIPDLRDTLLGTWRTNNRVTVFLVEHLPPELWASAVPGAPRRTI
                     RMIAGHLHNARCMWIKTLGQELGIPVPVSVDRRRVGCRELARALERSSRGISRLLALG
                     YDRGGSLPRVSTYTWRNLPLDVGHVLAYFVAHEAHHRGQILLSARLLGCRLPPEVTAG
                     LWQWTKRSAEAKPAPRRTHGL"
     gene            1500..>1682
                     /locus_tag="VLD58_01085"
     CDS             1500..>1682
                     /locus_tag="VLD58_01085"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSB52912.1"
                     /translation="MDAATRLAEAERTGDIPALGLLLAADYRGYDPSGRPQDREGVLR
                     GYAKGGVQVTSLRQSEL"
BASE COUNT          253 a          563 c          614 g          252 t
ORIGIN      
        1 ggggtcgttg gagggacggt cggcgatgaa cctgaaccaa gtgacactgc cggcgctcga
       61 ggtcggtccc gccgtgccgt tctatcagca actcgggctt cgtctcatcg tggacgatct
      121 cccccactat gtgcggttcg aatgtcccga cggaggaagc acgctgtccg tggagcgggt
      181 gaccgaacgg ggtgccgggc cggccccggt ggtctatttc gagtgcgagc agctcgacca
      241 gatggtggag cggctccggg ccgccggggt ccggttcgac agcctcccca ccgaccagcc
      301 ctggctctgg cgcgaggcaa ggctccagga ccccgcgggc aacgcggtgt gcctgtactg
      361 ggcaggccgg aaccgccgcg atccgccgtg gcgagtgacc tgagcggccc gatgcggtcg
      421 gcgccccttg cgcggcgaac cgtgcgggcg gactgttgga gtggtcgcgg cggcggagaa
      481 ccgggtgcgg ccgtcatcgc gcgatctgag gacacggttc cttttgcagt ggtggggcgg
      541 ccgcgtaccc cgccagttgc aacgtttcct accgcggcta cgggagggcg agatgccgaa
      601 gtacctctgg caggtctcct acacggccca aggggcgcag ggactgcaga aggacggcgg
      661 ctcggcccgg cgcgccatgg tgaagcgcct caccgagcag gcgggcggca agctcgaggc
      721 gttctacttc gcgctgggcg agtcggacgc gtacatcatc gccgaccttc cggatgccaa
      781 caccgcgatg gccgtcagcc tggcggtcaa cgccgctggg gcggcgcatc tgcgcaccgt
      841 gccgctcctg agcccggaag acatggatgc ggccgtgaag aagacggtgg attatcggcc
      901 gccgggcgcc ggcgggcgct agaccaccaa aggtcgggct gacgtgatcc ctgaccttcg
      961 ggacacgctc ctcggcacct ggcggaccaa caatcgggtg acggtgttcc tggtcgagca
     1021 cctgccgccc gagttgtggg ccagtgccgt cccgggggcg ccccgccgga cgatccgcat
     1081 gatcgcgggc cacctccaca atgcccgctg catgtggatc aagaccctgg ggcaggagct
     1141 ggggatcccg gtgcccgtca gcgtggaccg acggcgggtc gggtgccggg agctggcacg
     1201 ggcgttggaa cgaagcagcc ggggcatctc gcgcctcctc gcccttggct atgatcgagg
     1261 aggcagcctc ccgagggtgt cgacctacac ctggcgcaat cttccgctcg atgtcgggca
     1321 cgtgctggcc tatttcgtgg cccacgaggc gcaccaccgc ggccagatcc tgctctcggc
     1381 acggctgctg ggctgccgac tccccccgga agtcaccgcc ggactctggc agtggacgaa
     1441 gcggtcggcg gaggcgaaac cagcaccccg gcggacgcat ggcctctgaa gcctctctcg
     1501 tggacgcagc aacgcgcctg gccgaagccg agcgaaccgg ggacatcccg gccctcgggc
     1561 tgctcctggc ggccgactac cggggctatg acccttccgg gcggccccag gatcgcgaag
     1621 gcgtgctccg gggctacgcc aagggcgggg tgcaggtgac cagcttgcgt cagagcgagc
     1681 tt
//
LOCUS       DATIFF010000069         1629 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_470139, whole genome shotgun sequence.
ACCESSION   DATIFF010000069 DATIFF010000000
VERSION     DATIFF010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_470139"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..180)
                     /locus_tag="VLD58_01090"
     CDS             complement(<1..180)
                     /locus_tag="VLD58_01090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exo-alpha-sialidase"
                     /protein_id="HSB52913.1"
                     /translation="MGGIRVLVGTRKGAFILTADGKRQRWDITGPHFAGWEIYHMKGS
                     PADPGRLYASQTSGWF"
     gene            complement(211..>1629)
                     /locus_tag="VLD58_01095"
     CDS             complement(211..>1629)
                     /locus_tag="VLD58_01095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52914.1"
                     /translation="PPRDPENVYVYISGSAAVRSPAELAGCSGIMPDKDPTSALFRIE
                     VIKVPLAHPEQAAIVSSPRIFNDLVAPPRHGEAPEDVAAAAKVAAEARARGAFTAMVM
                     GQEMVLPAHFIDPLLDSVVSARHGTGPATAADSATLRAALPGIIAMLMGDMPGSGNGP
                     KPGPTQCHDITVYPAIGLAGGACEGYGMLLDIRNPTQPVRISAVDDSNFSYWHSATFN
                     NDGTKLLFSDEWGGGGQPKCRATDRREWGADAIFTVTGGQMRFQSYYKLPVPQTPQEN
                     CVAHNGSLIPIPGRDVMVQAWYQGGISVFDWTDAAHPKEIAFFDRGPVDSTRMVGAGS
                     WSAYWYNGVIVSSEIARGLDIFALVPSGFISQNEIDAAKSVHLDYFNTQGQARLVWPA
                     SFALARAYVDQLERSKGLEAGRISAVRQELARAEKVSGAGRKDTLTRLAGELDGDAAG
                     SADSAKVQTLAGAVRDLASASS"
BASE COUNT          229 a          576 c          554 g          270 t
ORIGIN      
        1 gaaccagccg ctggtctgcg acgcgtacag ccggccagga tccgccggcg agcccttcat
       61 gtggtagatc tcccagcccg cgaagtgggg tccggtgatg tcccaccgct gtcgcttgcc
      121 gtccgccgtc aggatgaacg cgcccttacg tgtcccgacc agcacccgta tgccgcccat
      181 gcctccctcc tttcggagcc tcgctccctt ctagctcgac gccgaggcca ggtccctcac
      241 ggcgccggcg agtgtctgca ccttggccga atcggctgag ccggccgcgt ctccgtccag
      301 ctcgcccgcc agccgcgtca atgtatcctt ccgccctgcc ccggagacct tttcggcgcg
      361 ggcgagttcc tgccggactg cggagatcct tcccgcctcc agacccttcg accgctcgag
      421 ctgatccacg taggcccgcg ccagcgcgaa gctcgccggc cagaccagcc gggcctggcc
      481 ctgggtgttg aagtagtcca ggtgcaccga cttcgcggcg tcgatctcgt tctgggagat
      541 gaacccgctc ggcacgagtg cgaagatgtc gaggccgcgc gcgatctcgg agctgacgat
      601 cacgccgttg taccagtagg cggaccacga ccctgcgccg accatccggg tcgagtccac
      661 cgggccgcgg tcgaagaacg cgatctcctt ggggtgggcg gcgtcggtcc agtcgaacac
      721 cgagatgccg ccctggtacc aggcctgcac catgacgtcg cgtcccggga tcgggatcag
      781 cgagccgttg tgggccacgc agttctcctg gggcgtctgc ggcacgggca gcttgtagta
      841 gctctggaac cgcatctgcc cgccggtcac ggtgaagatg gcgtccgcac cccactcgcg
      901 ccggtcggtg gcgcggcact tgggttgtcc ccccccgccc cattcatcgg agaagaggag
      961 cttggtgccg tcgttgttga aggtcgccga gtgccaatag gagaagttcg agtcgtccac
     1021 ggcgctgatg cggaccggct gcgtggggtt ccggatgtcg agcagcatcc catacccctc
     1081 gcacgcgccc cccgccaggc cgatcgcggg atagaccgtg atgtcgtggc actgggtggg
     1141 cccgggtttg ggaccgttcc cgctgccggg catgtcgccc atcagcatcg cgatgatgcc
     1201 cggcagcgcg gctctgagcg tggcgctgtc ggcggcggtc gcgggaccgg tcccgtgccg
     1261 ggcgctgacg acgctgtcca gcagcgggtc gatgaaatga gccggcagga ccatctcctg
     1321 tcccatcacc atcgcggtga aggcacccct ggccctggcc tcggccgcga ccttcgcggc
     1381 ggcagcgacg tcttccggcg cctcgccgtg ccgcgggggc gccacgagat cgttgaagat
     1441 ccgcggagag ctgacgatcg cggcctgctc cggatgcgcc agcggcacct tgatgacctc
     1501 gatccggaag agcgcggagg tcgggtcctt gtccggcatg atgcccgagc agccggccag
     1561 ctcggccggc gagcgcacgg cggccgagcc cgagatgtag acgtacacgt tctccgggtc
     1621 gcggggggg
//
LOCUS       DATIFF010000070         1039 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_316410, whole genome shotgun sequence.
ACCESSION   DATIFF010000070 DATIFF010000000
VERSION     DATIFF010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316410"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..724
                     /locus_tag="VLD58_01100"
     CDS             <1..724
                     /locus_tag="VLD58_01100"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HSB52915.1"
                     /translation="AQVLSLHADWSIRESDAFRHTAAQALSTALRHKRLVTVGIVPSR
                     PETGFGYIVPGNPLDEVARTVSRFAEKPTAATALDLMASGALWNSGLFAWTAATLIEE
                     VKSHTDEIAPHLPLLEQGDINGFFTAVTAVSIDVGLLERSAAIAVVPGRFTWDDVGTW
                     DALPRVRSRDSHGNAVVGPVYLTDTDDCVIWSDGDPIIASGVKDLVIVHAHGRILVMP
                     RRQAADLKTILDKLPPDVRDLP"
     gene            721..>1039
                     /locus_tag="VLD58_01105"
     CDS             721..>1039
                     /locus_tag="VLD58_01105"
                     /inference="COORDINATES: protein motif:HMM:NF024951.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative sugar nucleotidyl transferase"
                     /protein_id="HSB52916.1"
                     /translation="MNLYLLEPHTPDPAWAPFTGVRPVAELRAGVWKIRERWEAAFDL
                     ETTAILGEHSAHFHEGFEPPCRQGVTVQGPAIIAASWFAPTGAPVSLTPDVRRLLHGR
                     ETVG"
BASE COUNT          153 a          379 c          337 g          170 t
ORIGIN      
        1 ggcccaggta ctctcgctcc acgccgactg gtcgatccgc gaatcggatg ccttccggca
       61 caccgcggcg caggcgcttt ctaccgccct ccggcacaag cgcctggtga cggtcggcat
      121 tgtgccctcc cgcccggaga ccgggttcgg ctacatcgtg ccggggaatc cccttgatga
      181 agtggctcgc accgtctcgc ggttcgccga gaagcccact gccgccacgg cgctcgacct
      241 catggcctcg ggcgcgctct ggaacagcgg cctctttgcc tggaccgcgg ccaccctgat
      301 cgaggaggtg aagagtcaca ccgacgagat cgcgccgcac ctgcccctgc tggagcaagg
      361 cgacatcaac ggcttcttta ccgcggtcac cgccgtctcg atcgacgtcg gtctgctgga
      421 gcggagtgcc gccatcgcgg tggtgccggg ccggttcacc tgggacgacg tgggcacctg
      481 ggatgccctg ccccgggtcc gcagccgcga cagtcacggg aacgcggttg tgggaccggt
      541 ttatctcacc gacaccgacg actgcgtgat ctggtccgat ggcgatccca tcatcgcgag
      601 cggcgtgaag gacctggtca tcgttcacgc ccacggccgg atcctggtga tgccgcggcg
      661 gcaggcggcc gacctcaaga caattctcga caagcttccg ccggacgtgc gggatttgcc
      721 ttgaacctct acctcctcga gcctcacacc cccgaccccg cctgggcccc cttcaccgga
      781 gtgcgtcccg tcgccgaact ccgggccggc gtctggaaga tccgggagcg ctgggaagcg
      841 gcgttcgacc tcgaaaccac ggccatcctg ggcgagcatt cggcccattt ccacgagggg
      901 ttcgagcctc cctgccgcca gggtgtcacc gtgcagggcc cggcgatcat cgcggccagc
      961 tggttcgccc cgacgggtgc gcccgtcagc ctcacgcccg acgtgcggcg gctgctgcac
     1021 gggcgcgaaa cagtgggct
//
LOCUS       DATIFF010000071         1409 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_8865, whole genome shotgun sequence.
ACCESSION   DATIFF010000071 DATIFF010000000
VERSION     DATIFF010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1409
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8865"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..519
                     /locus_tag="VLD58_01110"
     CDS             <1..519
                     /locus_tag="VLD58_01110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52917.1"
                     /translation="AIHPAIPLPHPPATARPGWRSFALGLALAIALPAAQLYLAPYIQ
                     VVGPASAAAGPAAAPDPNAAGAGPRVASVAVGTPPAVDRSCDAEGAVRSPTLWTSVDM
                     TVTNETGMAIGILWLDFDGKRDETVAVDAGEPVVFHAAPGHLFMITGPDGGCLVIFKV
                     RGTSPIEIHIRA"
     gene            572..647
                     /locus_tag="VLD58_01115"
     tRNA            572..647
                     /locus_tag="VLD58_01115"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:605..607,aa:Arg,seq:ccg)
     gene            complement(833..1300)
                     /locus_tag="VLD58_01120"
     CDS             complement(833..1300)
                     /locus_tag="VLD58_01120"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HSB52918.1"
                     /translation="MTIEADVEADVARVVRSSVTVKLPRDAAFRLFTEQMGSWWPLAT
                     HSVFHAEAVAVTIEPLVGGRVYEATADGRTSDWGTVTEWQPGERLAMTWHPGEESDLA
                     TLVEVAFSETPDGGTHVDLRHTGWAVHGAEAAARAADYQRGWTALLEGFAKAA"
BASE COUNT          203 a          559 c          438 g          209 t
ORIGIN      
        1 gccatccatc ccgccatccc cctcccgcat ccacccgcga ccgcccggcc gggctggcgg
       61 tctttcgccc ttggccttgc gctcgccatc gcccttcccg ccgcacagct ctacctcgcg
      121 ccctacatcc aggttgtcgg gccagccagc gcagctgcgg gaccggccgc tgcacccgac
      181 ccgaacgccg ccggggccgg accccgggtc gcctcggtgg ccgtcgggac cccgccggcc
      241 gtcgaccgat cgtgcgacgc cgaaggcgcc gtgcgcagcc cgaccttgtg gaccagcgtg
      301 gacatgaccg tcaccaacga gaccgggatg gcgatcggca tcctctggct cgacttcgac
      361 ggcaagcgcg acgaaaccgt cgcggtcgat gctggggaac cggtcgtctt ccacgccgcc
      421 cccgggcacc tgttcatgat caccggaccg gacggcggtt gtctcgtgat cttcaaggtg
      481 cgtggaacgt cgccgatcga gatccacatc cgcgcctgac ccacgtcccg tccgccatcg
      541 gttccagctc gagcaggtaa gatcgccgtc cgcgcctgta gctcagtgga tagagcgtcg
      601 gcctccggag ccgaaggtcg caggttcgaa tcctgtcggg cgcgccagtt cgaccccttc
      661 gggcagagcc agcgccaatc cgtgcgcgca ggccgcctgg gtctgccaga cgtccacgat
      721 ctcgggcggc aagtcgcgag cggatcccct ggcagcgccg atcgggtcgt gcccggtcac
      781 gggcgagcca ttcggggcgc accgatcgag ccgagcggct gcccggccgc cctcaggcgg
      841 ccttcgcgaa cccctcgagc agcgccgtcc atccccgctg atagtccgca gccctcgccg
      901 ctgcctcggc gccatgcacc gcccagcccg tatggcgcag gtcgacatgc gtcccaccat
      961 cgggcgtctc gctgaaggca acctccacca gggtcgccag atctgactct tcgccgggat
     1021 gccaggtcat cgccagccgc tccccgggct gccactcggt gaccgtgccc caatcggacg
     1081 tgcggccatc ggcggtcgcc tcgtacacgc ggccgccgac gaggggctcg atggtcaccg
     1141 ccaccgcctc ggcatggaac accgaatggg tggccagcgg ccaccagctg cccatctgct
     1201 ccgtgaacag ccggaatgcc gcgtcgcgcg gcagcttgac cgtcaccgag ctgcgaacca
     1261 cccgcgccac gtcagcctcc acgtcagcct cgattgtcat caggactctc ctcgcggccg
     1321 atgccggccc gctgctcggc ttcggtgtcg gcgaccgcct tgaagccggc cagtgcctgc
     1381 gaccagaagc gctcccagta ctcacgcac
//
LOCUS       DATIFF010000072         3294 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2162793, whole genome shotgun sequence.
ACCESSION   DATIFF010000072 DATIFF010000000
VERSION     DATIFF010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3294
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2162793"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..511
                     /locus_tag="VLD58_01125"
     CDS             <1..511
                     /locus_tag="VLD58_01125"
                     /inference="COORDINATES: protein motif:HMM:NF012500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52919.1"
                     /translation="IPLDPALLAQAVTPLARETGLTIVLEPGRFLVGSAGLLLTTVLS
                     RKHSGGKELVLVDAGMNDLVRPSHYMAYHDIVELEAHGRDEGNVDVVGPVCETGDFLA
                     RDRRLPGLAAGEQLAVLGAGAYGFVMASSYNSRGRPAEVLVDGERWAVVRPRERVEDL
                     YAGEVADPW"
     gene            648..2204
                     /gene="guaA"
                     /locus_tag="VLD58_01130"
     CDS             648..2204
                     /gene="guaA"
                     /locus_tag="VLD58_01130"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003771338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HSB52920.1"
                     /translation="MTTHHDGILIIDFGSQYTQLIARRVREAHVYCEIHPPSRPVQWI
                     REWKPKGIILSGGPNSVYGENVPTAEPALLEMGTPVLGLCYGMQLLAQLSGGKVERAD
                     RREYGRAMVEVKGGKLFEGFGRGEETPVWMSHGDHVDTAPPGYTVTASSVNAPVAAFE
                     HQTRPLYGVQFHPEVAHTPRGGEILHNFLFEVCKCTPNWTPGNFIEGEIARIRELVGP
                     KTRVICGLSGGVDSSVAAVLVHRAVGDRLTRIFVDHGLLRLHERQQVEHTFRRHYGID
                     LRVVDASDAFLADLAGVTDPETKRKRIGHRFIDVFEKEARSVGNDIGYLVQGTLYPDV
                     IESMSPLGGPSVTIKTHHNVGGLPEKLPFKLIEPLRELFKDEVRAVGRSLGLPEEMVG
                     RHPFPGPGLAIRILGEVNRHQLDVLRKADHIYIEEIRAAGLYDEIWQAFAVLLPIRSV
                     GVQGDERSYDQVVGLRAVTSRDGMTADWYPFPPEALARISNRIANEVEGVNRVVYDVS
                     SKPPATIEWE"
     gene            complement(2221..>3294)
                     /locus_tag="VLD58_01135"
     CDS             complement(2221..>3294)
                     /locus_tag="VLD58_01135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52921.1"
                     /translation="MAVVESRHPRDDEARIFHGLSSIAAGQQDAGDTTYRRQREAAAR
                     LGRLVDKYPDHPGLAHYLIHAFDSPALASLAKASADKYARIAPDVPHALHMPSHIYVR
                     LGLWREAVTSNRRSAAAAEKMQRAQHWTGTWGQELHAWDYLAYADLQLGDDSAAHRLV
                     EEADRVTVTIPASDLVGDYALAAIPARYALERDDWAAATALRVRPSPGWPATEALTHF
                     ARALGAARSGDSVLAGRELAALVTLRDSLARMGGPQTYWSGQVEVQRLAAGAWLSLLH
                     GDTAAALTSALTAAEREDHTEKHPVTPGPVLPARELYADLLLAVHRPAEALQGYRAVE
                     ARQPHRARTRRGIEQAQGAGGTH"
BASE COUNT          508 a         1068 c         1211 g          507 t
ORIGIN      
        1 gatcccgctc gaccccgcac tcctggcgca ggcagtaacg ccgctggcgc gggagaccgg
       61 gcttaccatc gtgctcgaac ctggccgctt cctggtgggc agcgcgggcc tcctcctgac
      121 cacggtgttg tcacgcaagc actcgggcgg caaggagctg gtgctggtgg acgccgggat
      181 gaacgacctg gtccgcccca gtcactacat ggcttaccac gacatcgtgg agctcgaggc
      241 gcatgggcgg gacgagggga acgtcgacgt ggttggaccg gtctgcgaga ccggcgattt
      301 cctggcgcgc gaccggcggc tgccggggct cgcggcgggc gagcagctgg cggtgctggg
      361 cgccggggcg tacggattcg tgatggcgtc gtcgtacaac tcgcgcgggc gccccgccga
      421 ggtgctggtg gatggagaac gatgggcggt ggtacggccg cgggagcggg tggaggacct
      481 gtatgccggg gaagttgccg atccatggtg atcgcgcccg gtcacgactc cgctggccga
      541 tcgatcaggc tcaccagggg ccgcagtgcg ggaacgctgc ggcctcttgc agttcagtac
      601 gcgcggcgct caatgtgccg tgcggacctt cacggggaaa ggccggcatg acgacgcacc
      661 acgacggaat cctcatcatc gacttcggct cgcagtacac ccagctcatc gcgcggcggg
      721 tccgcgaggc ccatgtgtac tgcgagattc atcccccttc ccgcccggtg cagtggatcc
      781 gggaatggaa acccaagggg atcatcctct cgggcggacc caactcggtg tacggcgaga
      841 acgtccccac ggccgagccg gcgctgctcg agatggggac gccggtgctg ggcctctgct
      901 acggcatgca gctgctggcg cagctttcgg gtgggaaggt ggagcgggcc gatcgccgcg
      961 agtatggccg tgccatggtc gaggtgaagg gtggcaagct gttcgaaggc ttcggccggg
     1021 gcgaggagac cccggtctgg atgagtcatg gcgatcacgt ggacacggcg ccgccgggat
     1081 acaccgtcac cgcctccagc gtcaatgcgc cggtggccgc gttcgagcac cagacacgtc
     1141 ccctctacgg ggtgcagttc catcccgaag tggcgcacac gccgcggggc ggggaaatcc
     1201 tccacaactt cctcttcgaa gtgtgcaagt gcacgcccaa ctggactccg gggaacttca
     1261 tcgagggtga gatagcccgg atacgggagc tggtcgggcc caagacccgg gtgatctgcg
     1321 gactctcggg cggggtcgac agctcggtgg cggcggtcct ggtgcatcgc gcggtgggcg
     1381 accggctcac ccgcatcttc gtcgaccacg ggctgctgcg gctgcacgag cggcagcagg
     1441 tggagcacac cttccggcgg cactacggga tcgacctcag ggtggtggat gcgagcgacg
     1501 ccttcctcgc ggatctggcc ggtgtcaccg atccggagac caagcggaag cggatcgggc
     1561 accggttcat cgatgtcttc gagaaggaag cacgcagcgt cggcaacgac atcggctacc
     1621 tggtgcaggg gacgctgtac cccgacgtga tcgagtcgat gtcgccgctg ggtggtccct
     1681 cggtcaccat caagacccac cacaacgtcg ggggcctgcc cgagaagctg ccgttcaagc
     1741 tgatcgagcc gctgcgggag ctgttcaagg acgaagtgcg ggcggtgggc cggagcctgg
     1801 gcctgcccga ggagatggtg ggacggcacc cattccccgg accggggctc gcgatccgga
     1861 tcctcggcga ggtgaaccgg caccagctcg atgtgctccg caaggcggat cacatctaca
     1921 tcgaggagat ccgcgccgcc gggttgtacg acgagatctg gcaggcgttc gcggtgctgc
     1981 tcccgatccg ttcggtgggg gtgcagggcg atgagcggag ttacgatcag gtagtggggc
     2041 tccgcgcggt caccagtcgc gacgggatga cggccgactg gtatccgttc ccgcccgagg
     2101 ccctcgcgcg gatctcgaac aggatcgcca acgaggtcga aggcgtgaac cgggtggtct
     2161 atgacgtgag ctcgaagccg ccggcaacca tcgagtggga gtgagtccag cccaccgcag
     2221 ctagtgagtg ccgcccgcgc cctgcgcctg ctcgatgccg cgccgggtgc gggcccggtg
     2281 gggctggcgc gcctccaccg cccggtagcc ctggagcgcc tccgccggcc ggtgtacggc
     2341 gaggagcagg tcggcgtaga gctcccgggc ggggagcacc ggcccaggcg tcaccgggtg
     2401 cttctcggtg tgatcttccc gctcggccgc ggtcagcgcg gacgtcaggg ccgccgccgt
     2461 atcgccgtgg agcaggctta gccaggcccc cgccgccagc cgctggactt ccacctgacc
     2521 cgaccaatag gtctggggcc ctcccatgcg ggcgagcgag tccctcaagg tgacgagggc
     2581 ggcgagctcg cggcctgcca gcaccgagtc tccgctccgg gccgctccca gggcccgggc
     2641 aaaatgggtc agcgcttcgg tggcgggcca gccgggcgaa ggccgaaccc ggagggccgt
     2701 ggccgccgcc cagtcgtcac gctcgagcgc atagcgggcc ggaatcgccg cgagcgcgta
     2761 atcccccacg agatcactcg ccggaatggt gacagtcacc cgatccgcct cctcgacgag
     2821 gcggtgggcg gcgctgtcgt cgcccagctg aagatcggcg taggccaggt agtcccacgc
     2881 atgcagttcc tggccccacg tgccggtcca atgctgggcc cgctgcatct tctcggcggc
     2941 cgcggccgag cgccggttgg atgtcaccgc ctcccgccac aggcccagcc gcacgtagat
     3001 gtgcgagggc atgtgcaggg cgtggggaac gtcgggggcg atcctggcgt acttgtcggc
     3061 cgatgccttg gcgagcgaag ccagggcggg gctgtcgaat gcgtgaatga ggtagtgggc
     3121 caatccgggg tggtcgggat acttgtcgac cagccttccc agccgggccg ccgcttcgcg
     3181 ctggcgacgg taggtggtgt ctcccgcgtc ctgttgtccc gcggcgatgg aggacaggcc
     3241 gtggaagatc cgggcctcgt catcacgcgg atgacgtgac tcgacgaccg ccat
//
LOCUS       DATIFF010000073         2769 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1239966, whole genome shotgun sequence.
ACCESSION   DATIFF010000073 DATIFF010000000
VERSION     DATIFF010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2769
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1239966"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..623)
                     /locus_tag="VLD58_01140"
     CDS             complement(<1..623)
                     /locus_tag="VLD58_01140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52922.1"
                     /translation="MSALKLSPTRYLASVVTGAGVVTALLGMTGPKKSVAIPTFRIVA
                     QDYRYELPSEVPSGPVRLQLVNHGQELHHAQLVRLTQGKTMADMASLSPDGPPPEWVI
                     PVGGPNAVGPGDSSSVIEALPAGNYAIFCFIPSLSDHKEHRMKGMAAEFRVTERSGAQ
                     PVMPKADLTIRLLDYGFAPSAPIAAGRRTIRVVNDGPQLHELVLTMLP"
     gene            complement(620..1108)
                     /locus_tag="VLD58_01145"
     CDS             complement(620..1108)
                     /locus_tag="VLD58_01145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52923.1"
                     /translation="MLLRRAVRASLPLLLVSCRLGHTPAAEVQLTVTGGSNPGVYQAE
                     ADQPACSRDLVGPGSWGVQLTDWKGPKAGLRSLQLVVPADTRQEQFYLGVVFGDFFTG
                     IAREIETRPDSPRPKGHGHVTVDPSPAGATFRVSGVTQDSVAIQATIACHMAQATKEG
                     SR"
     gene            complement(1110..1676)
                     /locus_tag="VLD58_01150"
     CDS             complement(1110..1676)
                     /locus_tag="VLD58_01150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52924.1"
                     /translation="MRAIGWMTLAATVVLAACGGDGNGSTGPGNGGATSFSAEVTGDV
                     QTSVRGAALFGTRADEAQGMLFGVEMAESGAGESVIQIIRLGGEVPAVGTYQIVDALN
                     GNPQNGDFVAMAFDSDNGQPTAIFVGTGGTLRVTSSSATAFKGTFTFDAQGGLFSDPE
                     TTLTIKVDGSFHATPAPEGIQLKTIRSR"
     gene            1817..>2769
                     /locus_tag="VLD58_01155"
     CDS             1817..>2769
                     /locus_tag="VLD58_01155"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HSB52925.1"
                     /translation="MLRLKTFGGLALTRDGAPVEGAGAQRRRLALLALLAAAGERGLP
                     REKVLSLLWPESDPERARKSLAQAVYALRRELGSEELIVGVTEVRLGWEGFSSDLADF
                     RAAIQANDPEKAVALYEGPFLDGVYIDEAPEFERWAETERGSLAHEYVVLLEQLARGA
                     DKRGEHRAAVGWWRKLANADPLNSKVALGLMLALRAIGDRGGALQHFRVYEMLLRQEL
                     DLAPDRSLVELAESLRRASASPLAEAAASPPAATPAEPPEPHPGVGMTTVPGTPAAVR
                     AVATPPPSIPSPRAQPPHARVGISGKTDEYARPRPLGEPHAP"
BASE COUNT          419 a          977 c          938 g          435 t
ORIGIN      
        1 ggcagcatcg tcagcaccag ctcatgcagc tgaggaccgt cattcaccac ccggatggtc
       61 cgccgccccg cggcaatcgg cgcgctcggc gcaaagccat agtcgaggag ccggatcgtc
      121 aggtcggcct tgggcatgac cggctgggca ccgcttcgct ctgtcacccg gaactccgcc
      181 gccatgccct tcatccggtg ctccttgtga tccgacaggc tggggatgaa gcagaagatc
      241 gcgtagttgc cagccggcaa ggcctcgatg acgctcgagc tgtcgcccgg gccgacggcg
      301 tttggtccac cgaccgggat cacccactcg ggcggcggcc cgtccgggct gaggcttgcc
      361 atatcggcca tcgtctttcc ctgggtgagg cgaaccagct gcgcgtgatg cagctcctgc
      421 ccgtggttga ccagctgcag ccgcaccggc cctgacggca cttcgctcgg cagctcgtag
      481 cggtagtcct gggccacgat ccggaacgtg gggatcgcca cggacttttt cgggccggtc
      541 attccgagca gcgcggtgac gacgccggca ccggtgacca ccgaggcgag gtaacgggtg
      601 ggggagagtt tgagtgcgct catcgggaac cttcctttgt ggcctgcgcc atgtggcagg
      661 cgatggtcgc ctggatggcg acgctgtcct gagtgactcc actgacgcgg aacgtcgcgc
      721 ccgctggaga tgggtcgacc gtcacgtgcc catggccttt gggccggggc gaatcgggcc
      781 gcgtctcgat ctcacgggcg atgcccgtga agaagtcgcc gaacacgaca cctagataga
      841 actgctcctg ccgggtgtcg gcgggcacca cgagctgaag gctccggagt cccgccttgg
      901 gtcccttcca atcggtgagc tgcacccccc agctccccgg tcccaccagg tccctgctgc
      961 acgccggctg atccgcttcg gcctggtaga cccccggatt ggagccgccc gtcaccgtga
     1021 gctggacctc cgccgccggt gtgtgcccca ggcggcagct caccagcagg agcggcagcg
     1081 aggcacgcac tgcacggcgt agcagcatgt cagcggctcc ggatggtctt gagctggatc
     1141 ccctcgggcg ccggcgtggc gtggaaggag ccgtcgacct tgatcgtcag cgtggtctcg
     1201 ggatcgctga acagcccgcc ctgcgcgtcg aaggtgaagg tccccttgaa cgcggtcgcg
     1261 gagctcgagg tcaccctgag ggtgccgccg gtgccgacga agatcgcggt cggctggccg
     1321 ttgtcgctgt cgaaggccat ggccacgaag tcgccgttct ggggattgcc attgagcgca
     1381 tccacgatct ggtaggtgcc caccgccggc acctcaccgc ccagccggat gatctggatg
     1441 accgactcac ccgcaccgct ctccgccatc tccaccccga acagcatgcc ctgggcttca
     1501 tccgcgcggg tcccgaagag cgcggctccc ctcacgctgg tctgcacatc tccagtaacc
     1561 tccgcgctga aggaggtcgc cccgccattt ccgggaccgg tcgagccgtt accgtcgccg
     1621 ccgcacgccg ccaggaccac cgtcgccgcc agggtcatcc acccgatcgc ccgcatagcc
     1681 acactccgag ttccgaggtt gtgtatttcg ccggacgctt gctcgcccgt cggacggcgg
     1741 gtacaatagg cccgacgttc acctcccgat taagacccgg ctatctcccg atcaactccc
     1801 gatcaactcg gctaacgtgc tgcgcctcaa gactttcggt ggccttgcgt tgacccggga
     1861 cggagccccg gtggaagggg ccggggccca gcgccgacgg ctggcgctac tcgccctgct
     1921 ggctgcagcc ggcgagcggg gcctgccgcg cgagaaagtc ctttcgctgc tgtggccgga
     1981 gagcgatccg gaacgggccc ggaagagcct ggcccaggcg gtctatgcgc tccgccggga
     2041 actcgggtcc gaagagctga ttgtcggggt gacggaggtg cggctcgggt gggagggatt
     2101 cagcagcgac ctcgccgact tccgggccgc cattcaggcc aacgaccccg agaaggcggt
     2161 ggccctgtac gaggggccgt tcctcgacgg ggtctacatc gacgaggctc cggagttcga
     2221 gcgctgggcc gagaccgagc gcggcagcct ggcccacgaa tacgtggtgc tgctggagca
     2281 gctcgcgcgc ggcgccgaca agcggggcga acaccgcgcc gcggtgggat ggtggcgcaa
     2341 gctcgccaac gccgatcccc tgaacagcaa ggtggcgctg ggtctcatgc tggccctgcg
     2401 cgccattggc gatcggggcg gagcgctgca gcacttccgg gtgtacgaga tgctgcttcg
     2461 ccaggagctc gacctcgcac ccgaccgctc cctggttgag ctggcagaat cgctgcgtcg
     2521 cgcctcggcg agcccgctgg cagaggcggc ggcctcaccg ccggcggcca caccggccga
     2581 gccgcctgag ccccaccctg gcgtaggaat gacgacggtt ccgggaacgc cggcggcggt
     2641 gcgcgcggtc gccacacccc cgccctccat tccttcgcct cgcgcccaac caccgcacgc
     2701 gcgggtgggg atctcgggaa agacggacga gtacgcccgc ccacgaccct tgggcgagcc
     2761 gcacgcccc
//
LOCUS       DATIFF010000074         1274 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_9749, whole genome shotgun sequence.
ACCESSION   DATIFF010000074 DATIFF010000000
VERSION     DATIFF010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1274
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9749"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..644
                     /locus_tag="VLD58_01160"
     CDS             <1..644
                     /locus_tag="VLD58_01160"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HSB52926.1"
                     /translation="LESIEQVAGPQAIVTSSSSGLVPGDLFGRLLQRGRCLVAHPLNP
                     PELLPLVELVPGEETDPQAIETASAFLLALGRVPIVLRRAVPGYVVGRISAAVWRECI
                     DLVLSGAIDVADLDRAVSLGPALGWAAAGPHLTYHLGAGPGGVHIFLQRLLTSFEQWW
                     GNLASWEKLDPAQQRALITAIEKAYQGKIVQLREARDRRLGAILRTLEEDRTR"
     gene            complement(652..1086)
                     /locus_tag="VLD58_01165"
     CDS             complement(652..1086)
                     /locus_tag="VLD58_01165"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSB52927.1"
                     /translation="MFKRILIPLEHTPTDETILEYVRPMARASHAALVLIHVADGWVA
                     RNIHHLDLRESEEMKEDRVYLERVSAQLQAEGLACEAVFAAGEPAREIAEAATREHCD
                     LIAMATHGHRGLNDVVRGSVASALRHITMVPILMVRAGKAKA"
     gene            complement(1086..>1274)
                     /locus_tag="VLD58_01170"
     CDS             complement(1086..>1274)
                     /locus_tag="VLD58_01170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HSB52928.1"
                     /translation="QVILSVQLSFAVFPLVRFTSERAKMGEFVNPRWLKVLAYSVAAV
                     IAGLNAWLLVRTIQGWLG"
BASE COUNT          200 a          449 c          414 g          211 t
ORIGIN      
        1 tgctggaatc gatcgagcag gtcgccggcc cccaggcgat cgtcaccagc tcctcgagcg
       61 gtctcgtgcc gggcgatctg ttcggccgct tgctgcagcg cggccgttgc ctcgtggcgc
      121 acccgctcaa tccgccggag ctgctcccgc tcgtcgaact ggtgccaggg gaggaaaccg
      181 acccccaggc gatcgaaacc gcgagcgcct tcctgctggc cttgggccga gtgccgatcg
      241 tgctgcgccg cgcggtgccc ggctacgtgg tcgggcgcat ttcggccgcc gtctggcggg
      301 agtgcatcga tctcgtgctg agcggcgcca tcgacgtggc cgacctggat cgggcggtct
      361 cgctcggtcc cgccctcgga tgggccgcgg ccgggccgca cctcacctat cacctcggtg
      421 cgggccccgg tggagtccac atcttcctcc agcgtttgct caccagcttc gagcagtggt
      481 gggggaacct cgcgtcgtgg gagaagctgg accccgcgca acagcgggcc ctcatcacgg
      541 cgatcgagaa ggcctaccag gggaagatcg tgcagctgcg ggaagccaga gaccgccggc
      601 tcggtgccat actgcggaca ctggaagaag accggacgag gtagcgcgtt cttacgcttt
      661 agcctttccc gctctcacca tcaggatcgg caccatcgtg atgtgccgca gcgcgctggc
      721 cacgctgccg cgcaccacgt cgttcagtcc ccggtgcccg tgcgtcgcca tcgcgatgag
      781 atcgcaatgc tcgcgagtcg ccgcctcggc gatctcccgg gctggctccc ccgccgcgaa
      841 caccgcttcg caggccagtc cctccgcctg cagctgcgca ctgacccgct ccaggtagac
      901 gcggtcctcc ttcatctctt cggactcccg gagatccaga tggtggatgt tccgggcgac
      961 ccagccgtcg gccacgtgga tcagcacgag cgcggcatgc gatgcacgcg ccatgggccg
     1021 cacatactcc aggatggttt cgtcggtggg cgtgtgctcg agcgggatga ggatccgttt
     1081 gaacatcagc cgagccagcc ctgaatcgtg cgcaccagaa gccaggcgtt caacccggcg
     1141 atcaccgccg ccacgctgta cgccagcacc ttgagccagc ggggattgac gaattcgccc
     1201 atcttcgccc gctccgaggt gaaccgcacg agggggaaaa ccgcgaagga gagctgaacg
     1261 ctcagaatca cctg
//
LOCUS       DATIFF010000075         2746 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2163733, whole genome shotgun sequence.
ACCESSION   DATIFF010000075 DATIFF010000000
VERSION     DATIFF010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2746
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2163733"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(46..972)
                     /locus_tag="VLD58_01175"
     CDS             complement(46..972)
                     /locus_tag="VLD58_01175"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HSB52929.1"
                     /translation="MAKRRWTVVLVPHGSEPSKIVEVSYGLVKAAVGGAALAVAVALL
                     VGYATVSHTADLTRTSRLQQENVRLAQELGELHGRLSSLADTISRITQRDAKIRVLAN
                     LDPLDPQVQAAGIGGPTMAPRPALAGDGPAVRRSEEIRVDLNALIRRANVLASSFEEA
                     KDSLASHSKRLAATPSIMPTQGWLTSAFSSMREHPILHIARPHEGIDVTAPMGSPIEA
                     PAAGVVTDAGWESGYGNTVTIDHGYGIVTKFAHASKLLVKTGQRVARGQRIALVGNTG
                     LATGPHLHYEVHVNGRPVDPLRYVLPDRVVTD"
     gene            complement(1166..2677)
                     /gene="metG"
                     /locus_tag="VLD58_01180"
     CDS             complement(1166..2677)
                     /gene="metG"
                     /locus_tag="VLD58_01180"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR00398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HSB52930.1"
                     /translation="MPKFYLTTAIDYSNGDPHLGHALEKVGADCIARYRRLRGDDVHF
                     LMGMDEHSQAVLQAAEQNGLSPSAWVDRMASTFADFWRRLECSNDDWIRTTEPRHHRT
                     VTALLEEIARRNPGDLFVGEYEGLYCYGCEEFKQPAQIANGHCIEHPTLELVRTRERN
                     HFFRLSRFRDPLLSLIRSGEFRVEPAIRRNEILRLLEDGLQDISISRNRQAWGIPFPG
                     DSEQTVYVWFDALINYLSATGYPDPGYERLWPAELHVVGKGITRFHCVIWPAMLLSAG
                     LPLPREVWAHGYVQWEGTKMSKSAGTAVSLHDAIERHGPDALRHFLLREVGFEADGNF
                     TWERFDERYTAELADGLGNLASRSLAMLAKYRNGLVPAGGDTSLDQAGREAVQQYARA
                     MDALDLRGGAEAAWALVSTANLYIQQVAPWALAKAGQDAELDAALAALARALYRLAVL
                     AGPFIPGKAQRLWQSLGLPGEAAGANWASLEAPPARGLATTKPEVLFPKPATA"
BASE COUNT          395 a          950 c          957 g          444 t
ORIGIN      
        1 cctgtccgcc tgtccgcctg tccgcctgtc cgcctgtccg cctgtctaat ccgtcaccac
       61 tcggtccggc agcacgtagc gcagcgggtc caccgggcgg ccgttcacgt gcacctcgta
      121 gtgcaggtga ggcccggtcg cgaggcccgt gttgccgacc agcgcgatgc gctggccgcg
      181 cgccacccgc tggccggtct tcaccagcag cttcgacgca tgggcgaact tggtgacgat
      241 gccgtagcca tggtcgatcg tgacggtgtt gccgtacccc gattcccagc cggcgtcggt
      301 cacgacaccc gcggcgggcg cctcgatcgg gctccccatc ggcgcggtca cgtcgatgcc
      361 ctcgtgcggc cgggcgatgt ggaggatggg gtgctcgcgc atggaggaga aggcgctcgt
      421 gagccagccc tgcgtcggca tgatggaggg cgtggccgcg agccgcttcg agtggctggc
      481 caggctgtcc ttggcttctt cgaaggagga ggccagcacg ttggcgcgcc ggatcagcgc
      541 gttcaggtcc acccggatct cttccgaccg gcgcaccgcg ggaccatcgc ccgccagcgc
      601 ggggcggggg gccatggtcg ggccaccgat gcccgccgcc tgcacctgcg ggtcgagcgg
      661 atcgagattg gccagcaccc ggatcttggc atcgcgctgg gtgatgcgtg agatggtatc
      721 ggccagggag ctgagccggc cgtgcagctc gcccagctcc tgggccagcc ggacgttctc
      781 ctgctgcagc cgggatgtcc gcgtcagatc cgcggtgtgg gagaccgtgg cgtacccgac
      841 gagcagggcc acggccaccg ccagggcggc gccgccgacc gctgccttca ccaggccgta
      901 ggagacctcg acgatcttcg agggctccga cccgtgggga acgagaacta cggtccaccg
      961 gcgtttcgcc atgcgcgtgt cctcacgccg tcgtagatgc cagttgtcct gcaggacaat
     1021 ttgggccgag cgagtgcaac gggaggtgac ccgacacaca gaaagcctgc aaaaaggtgg
     1081 cccgcgaccc cgggttcgtc aagcccggtg cccgcatggt aagttcttga ctgtcaatta
     1141 gttttgctcg ttgacagtct aacttctagg cggtggcggg tttggggaac aacacctcgg
     1201 gcttggtggt agccagcccc ctcgccggcg gggcctccag gctcgcccaa ttcgccccgg
     1261 cggcctcgcc cggcagcccc agcgattgcc acagcctctg ggctttcccg ggtatgaagg
     1321 ggcccgcgag cactgccagt cggtagagcg ccctggcaag cgccgcgagg gccgcatcca
     1381 gctccgcgtc ctgccccgcc ttggcgagtg cccagggcgc cacctgctgg atgtacaggt
     1441 tggccgtgct cacgagcgcc caggcggcct cggctccccc tcgcaaatcc agcgcgtcca
     1501 tcgcccgtgc atattgttgc accgcctctc ggccggcctg gtcgagcgac gtgtccccgc
     1561 ccgcgggtac cagcccgttc cggtatttcg cgagcatggc cagcgagcgc gaggcgagat
     1621 tgcccagccc gtcggccagc tccgccgtgt agcgctcgtc gaaccgctcc cacgtgaagt
     1681 tgccgtcggc ctcgaagccg acctcccgca gcaggaaatg gcgcagcgcg tcggggccat
     1741 ggcgctcgat cgcgtcgtgc aggctcacgg ccgtgcctgc cgacttcgac atcttggtgc
     1801 cttcccactg cacgtagccg tgggcccaga cctcgcgcgg cagcggcagc cccgcgctga
     1861 gcagcatggc gggccagatg acgcagtgaa accgcgtgat ccctttgccc acgacgtgta
     1921 gctcggcggg ccacaggcgc tcgtagcccg ggtcgggata tccggtggcc gagagatagt
     1981 tgatgagcgc gtcgaaccag acgtagaccg tctgctccga gtcgccgggg aagggaatgc
     2041 cccacgcctg gcggttccgg ctgatcgaga tgtcctgcag cccgtcctcc agcagccgga
     2101 ggatctcgtt ccggcggatg gccggctcca cccggaactc ccccgagcgg atgagcgaga
     2161 gcagcggatc gcggaagcgg ctcaggcgga agaagtggtt ccgctcgcgg gtgcggacga
     2221 gctcgagggt cgggtgctcg atgcagtgcc cgttcgcgat ctgcgccggc tgcttgaact
     2281 cctcgcagcc gtagcagtac agcccctcgt actcgccgac gaagaggtca ccggggttcc
     2341 ggcgggcgat ctcctcgagc agcgccgtga cggtgcggtg atgccgcggc tcggtggtcc
     2401 ggatccagtc gtcgttgctg cactcgagcc ggcgccagaa gtccgcgaac gtcgaggcca
     2461 tccggtccac ccatgccgac gggctcaggc cgttctgctc ggccgcctgg aggaccgcct
     2521 gggagtgctc gtccatgccc atgaggaagt ggacgtcgtc gcctcgcagc cggcgatagc
     2581 gcgcgatgca atcggccccc accttctcga gcgcgtggcc gaggtggggg tcgccgttgg
     2641 agtagtcgat ggcggtggtg agatagaact tcggcatgcc ggaaagtaac cgggtccggc
     2701 gacccgtcag ccctcgggcg gcaggcccga ctccggcgcc ggcccc
//
LOCUS       DATIFF010000076         1601 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1394638, whole genome shotgun sequence.
ACCESSION   DATIFF010000076 DATIFF010000000
VERSION     DATIFF010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1601
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1394638"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            330..1489
                     /locus_tag="VLD58_01185"
     CDS             join(330..588,588..1489)
                     /locus_tag="VLD58_01185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611749.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HSB52931.1"
                     /translation="MPKSRPPYPPEFRQRIIELVRKGRTPESLAEQFEPSAQTIRNWL
                     AQAERDTGRRSDGLTTDEREELRRLRRENKTLREERDILKKAGSLVCQGDRLDPVQGF
                     EFVRAHRATHRLATLCRVLGVSPSGYYAWRQRPLSARARADVTLSAQIQAIHTRSRGT
                     YGVPRVHAELAADGVRIGRKRVARLMRTVGVQGVSRRKSQRTTRRDPTAAPAPDLVSR
                     DFAAAGPDRLWVADITYIPTWAGFLYLAVVLDVWSRRVIGWAMATHLRTELVLDALNM
                     AVAQRRPTTVIHHSDQGCQYTSITFGLRCREAGVRPSMGHVGDAYDNALCESFFATLE
                     CELLDRRRFPTQAEARMAVFDFIEGWYNPHRRHSGLDYQSPIRYEQQHPVVA"
BASE COUNT          265 a          556 c          523 g          257 t
ORIGIN      
        1 cgaaggtgaa cttggtcggg gtccgcatgg tagaaggcac gttcggcctc gtcgatagca
       61 tgttcagcga ggcggagctc atcttcacgg gcccgctgct gcacgtgata ctcacgcatg
      121 gcctctcggc gggcctcctc cagcatgtca accgacggag gcactagggt gtggaggatc
      181 tcggattcca ctagcttgtc gatacgatgt gctcgaactt tcccgcacac ggttgaatct
      241 ccagtggtgt tgttttggtg acaccaaacg caggatggag ttgacccgct tccgtggaca
      301 ttgttcccct atggggggag gagtccacga tgccgaagag tcgaccgccg tacccaccgg
      361 agttccggca acggatcatc gaactagtgc ggaagggccg caccccggag tcgctggctg
      421 agcagttcga gccgtccgcc cagaccatcc gcaactggct ggcccaggcc gagcgcgaca
      481 ccgggcggcg ctcggatggc ctcacaaccg acgagcggga ggagcttcgc cggcttcggc
      541 gggagaacaa gaccctccgc gaagagcggg acatcctaaa aaaagccgca gcctggtttg
      601 ccaaggagac cggctcgatc ccgtccaagg attcgagttc gtgagggcgc accgggccac
      661 ccaccgcctc gccaccctgt gccgggtcct gggggtctcc cccagcgggt actacgcgtg
      721 gcggcagcgg ccgctctcgg cgcgcgcccg agccgacgtc accctgagcg cccagattca
      781 ggcgattcat acgcgctcgc gcggcaccta cggggtcccc cgcgtgcacg ccgagctggc
      841 cgccgatggc gttcgcatcg gccgcaagcg cgtggcgcgc ctcatgcgca ccgtcggcgt
      901 gcagggcgtg agccgtcgga agtcccagcg cacgacgcgc cgagatccca ccgccgcgcc
      961 cgcgcccgat ctggtcagcc gcgacttcgc cgcggccggg cccgatcgcc tctgggtggc
     1021 cgatatcacc tacatcccga cctgggccgg cttcctctat ctggccgtcg tcctcgatgt
     1081 gtggagtcgc cgggtgatcg gctgggcgat ggcgacgcac ctgcgcaccg agctggtgct
     1141 cgatgccctg aacatggccg tggcgcagcg gcggccgacc accgtgatcc atcactccga
     1201 ccagggctgc cagtacacct cgatcacctt tggcctccgc tgccgcgaag ccggcgtccg
     1261 gccctccatg ggccacgtgg gcgacgccta cgacaacgcc ctctgcgaga gcttcttcgc
     1321 cacgctcgag tgtgagctgc tcgatcgccg ccgcttcccg acccaggccg aggcccggat
     1381 ggccgtcttc gacttcatcg agggctggta caatccgcac cggcggcatt ccggcctgga
     1441 ctatcagtcg ccgatccgct atgaacagca acacccagtc gtcgcgtagc gcgaaagccg
     1501 tgcaccgtcc acgaaaccgg ggcaactcca agacccagcc ggggcggtgg aatggggtgg
     1561 cgacctgggt agcgtgcatc aggccgagag cgatgcgctg g
//
LOCUS       DATIFF010000077         2773 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_471898, whole genome shotgun sequence.
ACCESSION   DATIFF010000077 DATIFF010000000
VERSION     DATIFF010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2773
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_471898"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..733
                     /locus_tag="VLD58_01190"
     CDS             <1..733
                     /locus_tag="VLD58_01190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52932.1"
                     /translation="VNEELAKARSAVVSSATQPEGGTPAERDRAARAAALDRVQALVA
                     RLNESEQRLEQSTQRARSLSGRNSTLLKQIEAYKVSIDSLQATALRTETELRGVIDSQ
                     SVQIAGLNTQLDTARVVNTALKDTVSNLTSYKNTVYYIAGTEEELLNKGIVVKEGKKF
                     LFFGGRQLHPARALDSSVFTALDKTQATTIELPANHEYKLVSRQDLEAVDTTSFKDGK
                     VTGQLRISEPETFWAPSKYLILVQN"
     gene            complement(822..>2773)
                     /locus_tag="VLD58_01195"
     CDS             complement(822..>2773)
                     /locus_tag="VLD58_01195"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HSB52933.1"
                     /translation="LLAGMVVGPHIPIPLVANEGMVHTMAELGVILLMFGLGLEFSFR
                     KLLSVGAPASVVAVLQTTTMVALGFLAGQAFGWTVLESIYAGAVIAISSTTIIVKAFA
                     EQQAAGRFVQVAFGVLIIEDLIAILLLAGLTAFSTNGGLTAAVLGRTALRLLVFLAGL
                     ILVGLLLVPRLTRAIVRLDRPEITVIAAVGLAFGTGYLALAFGYSVALGAFFAGSLVA
                     ESGEEKKVEHLVQPVRDMFAAIFFVAVGMMIDPRVIAENWLPVLVFALLVIGGKVLAV
                     SVGAFLAGYGTRTAVQTGMSLAQIGEFSFIIAGVGLATGATRPFLYPVAVAVSAITTL
                     TTPWLIRGAGPTASWVDRHLPRPVQNLVSLYGSWMEQLRTPPVGARSRAHGYAGLLLL
                     DLAVLGLISLATWQFQDAATRSLTLAIGLTPELSRALVLGAALVAASPFVVGLVRLTR
                     ALSQSYALRALPQAAPGKVDLGLAPRRALIVTWQLAVVLLVSVPFLALSGRLMSLPVA
                     LAIMGLVLVTSGIAFWRSASNLVGHTRAGAEVIVAALGRQLAPAPAVGASLEPIYSMI
                     PGLGEPVPHSVSSGDYADGRTLGQLDLRDATGASVLVIVREGSPHLLPDGKERLQRGD
                     LLALAGSTDAVEHARRFLTRGPEST"
BASE COUNT          522 a          946 c          943 g          362 t
ORIGIN      
        1 cgtgaacgag gagctggcca aggcgcggag cgccgtggtg tcctccgcca cgcagcctga
       61 gggcggcacc cctgccgagc gcgatcgcgc ggcccgcgcc gcggcgctgg accgggttca
      121 ggcgctggtc gcccggctca acgagagcga gcagcggctg gagcagagca cccagcgggc
      181 ccgttcgctc tccggccgca acagcaccct gctcaagcag atcgaggcgt acaaggtgag
      241 catcgacagt ctgcaggcca ccgcgctgcg gaccgagacc gagctccgcg gagtgatcga
      301 ctcgcagtcg gtccagatcg ccggcctcaa cacccagctt gataccgccc gggtggtcaa
      361 taccgcgctc aaggacaccg tcagcaacct gacgagctac aagaacacgg tgtactacat
      421 cgccggcacc gaggaagagt tgctcaacaa gggcatcgtc gtgaaggaag ggaagaagtt
      481 cctcttcttt ggcggcaggc agctgcaccc ggcccgggcg ctcgactcct cggtcttcac
      541 cgcgctcgac aagacccagg ccaccaccat cgagctcccc gccaaccacg agtacaagct
      601 cgtgtcgcgc caggacctcg aggcggtcga caccacctcg ttcaaggatg gcaaggtgac
      661 cggccagctc cggatctccg agccggagac cttctgggcc ccgtccaagt acctgatcct
      721 ggtccagaac tagagggcgg ttggcctttg gccattgccc gttagctgat ccgagttcga
      781 ccaaccctcc ggtgatgagc cggagggttt cggttttccg gtcaggtgga ttcgggcccg
      841 cgggtgagga accgccgcgc atgctccacc gcatcggtcg atcccgccag cgcgagcagg
      901 tcacctcgct ggagccgctc cttcccgtca ggcagcagat ggggacttcc ctcgcgcacg
      961 atcaccagga cgcttgcccc ggtggcatcc cggagatcga gttggcccag ggtgcggcca
     1021 tcggcgtagt cgccggagga gacgctgtgg ggcaccggct cgcccaggcc ggggatcatc
     1081 gagtagatgg gttcgaggga tgcccccacg gcaggcgccg gcgcgagctg acggcccagc
     1141 gccgcgacga tcacttccgc gcccgcccgg gtgtgtccca ccagattgct ggcgctccgc
     1201 cagaaagcga tccccgaggt caccagcacc aggcccatga tggcgagtgc caccggcaac
     1261 gacatcaggc ggccgctgag cgccaggaac ggaacgctca ccagcagcac caccgccagc
     1321 tgccacgtga cgatcagcgc tcgccgcggc gcaagaccga gatccacctt ccccggagcc
     1381 gcttggggga gagcccgaag ggcgtaactc tggctcagtg cccgggtgag ccggaccagc
     1441 ccgaccacga aaggcgatgc cgcaaccagc gccgcgccga gcaccaatgc gcgcgacagc
     1501 tccggagtga gaccaatcgc gagggtcagg ctgcgggtgg cagcgtcctg gaactgccag
     1561 gtcgcgagcg agatcagtcc gagcacggcg aggtcgagca atagcaggcc cgcataccca
     1621 tgtgccctgg accgggctcc cacgggcggg gtccgcagct gttccatcca ggagccgtag
     1681 agcgacacca gattctggac cggacgggga aggtggcggt cgacccacga tgcggttggt
     1741 ccggcgcccc tgatgagcca gggggtggtg agcgtggtga tggccgagac cgcgaccgcc
     1801 accggataga gaaacggccg agtggcgccg gtggcgaggc ccacgccggc gatgatgaac
     1861 gagaactccc cgatctgcgc caggctcatg ccggtctgca ccgcggtgcg ggtgccatac
     1921 ccggccagga aggcgccgac gctcacagcg agcaccttgc cgccgatgac cagcagggcg
     1981 aagaccagga ccggcagcca attctcggcg atgacccgtg gatcgatcat cattcccacg
     2041 gccacgaaga agatggccgc gaacatgtcc cgcaccggct gtaccaggtg ctcgaccttc
     2101 ttctcttccc ccgattccgc cacgagtgaa ccggcgaaga aggcccccag cgccaccgag
     2161 tagccgaacg cgagggccag gtaaccggta ccgaaggcga ggcccaccgc cgcgatgacg
     2221 gtgatctcgg gccggtcgag ccgcacgatg gcccgggtga ggcgcggcac cagcaggagg
     2281 ccgacgagga tgagtccggc gaggaagacc agcagcctca gcgcggtgcg gccgagcact
     2341 gccgccgtga ggccgccgtt ggtggagaag gccgtgagtc cagcgaggag gaggatcgcg
     2401 atcaggtctt cgatgatcag gacgccgaag gccacctgca cgaatcgtcc cgcggcctgc
     2461 tgctcggcaa aggccttcac gatgatggtg gtgctggaga tggcgatgac cgcgccggcg
     2521 tagatgctct ccagcacggt ccacccgaag gcctggccgg ccagaaagcc cagcgccacc
     2581 atggtggtgg tctggagcac cgcgacgaca ctcgcgggcg ccccgaccga gaggagcttc
     2641 cggaagctga actcgagccc cagcccgaac atcaggagga tcacgcccag ctcggccatg
     2701 gtgtggacca tgccctcgtt ggccacgagg gggatcggga tgtggggccc gacgaccatc
     2761 cccgcgagca ggt
//
LOCUS       DATIFF010000078         5791 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1702626, whole genome shotgun sequence.
ACCESSION   DATIFF010000078 DATIFF010000000
VERSION     DATIFF010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5791
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1702626"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..856
                     /locus_tag="VLD58_01200"
     CDS             <1..856
                     /locus_tag="VLD58_01200"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSB52934.1"
                     /translation="GLRVANAAYLEAMRIPLIRGRWFTEGDMSPVAGPIVINRTLAER
                     YWPGKDPLGHRISFFKSAAGRSDFGTPVEGTVVGVVADVRQFGLDQPSDAAIYLPHTV
                     NPWGHISLVVRTAVPPSSLLEPVRRALLAEEPELVLTGLNTMDDLVSGSLAPREFLTV
                     LVGVFAAAALGLATIGLYGVLSRLVRARQREIGIRRAVGADERSIMALVLREGMIAVA
                     TGAGGGLLLSIGLARALTSLLFGVTPGDSLAYIAALALLVTVALLACLIPARRAARID
                     PTIALSSE"
     gene            886..3303
                     /locus_tag="VLD58_01205"
     CDS             886..3303
                     /locus_tag="VLD58_01205"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADOP family duplicated permease"
                     /protein_id="HSB52935.1"
                     /translation="MSGLFHDIWRGIRRLSQAPVFSAVVIATLALGIGVNVALFTVAD
                     RALLRAVPASEPERLVRVWQTSRLNQIRLSLSYQQIRELAGLGSQVEAAAGYETGRFN
                     VSGNGDPVEVPGLVASADLFRVLKISPRLGRAFAPSEEHDQVVLLSYRWWVTRWGADP
                     EVLGKALTIENRSYTIIGVLPPEATFPSDTEQLWLPIGVRFAADPTLETDRRRSRFSA
                     VLRLAPGATLGSLRSALTAAAASASGTGDTATARFETGYAADLLTDEVSSTSRPVLLV
                     LLGAALLVLVAASANAAALLIARATGRQREIALRQVLGAGPGRVLRELLLEHLLLALA
                     AGVVGGLLAEWGLALLAGTWPAALPRVSLSDAPFRVLLFTALISLVTGVAFGLVPAMR
                     AVNPDLERSLRADGTRTSGSRQRRRLLNGLVAGQLAVSLVLLVGAGLLLRSFIRLGAV
                     DPGFDPAHLLAMRVRLTPSRYPGRPSQDAFYDALVSRLQALPGVDQVTTSTGLPLAGS
                     NDYNIIDPREIRPDDPESMLMVGMFRVGDDFPAALRMPLIEGRGLTREDNRSSSRSVV
                     ISRGLALRLWGDQPAVGKRIPQGTEPLTVVGVAQDLRFGRLDGEVQPAMYLPLRQESA
                     ERGELWFLIRFSGDPIPLAAGVKQAVRSVDRDQPIGELVSMMDVVSRSTASRRFNLLL
                     VSVFAGLALGLAVIGIAGVTAYSLSQRTRELGIRVALGADRATLLKLGLGEVVRVVAV
                     GAGVGLLLALLLTRALGSMLFGVGPSDPLSYLAGTMVVAGVALVACYVPIHRAAGADP
                     IITLKAE"
     gene            3372..4031
                     /locus_tag="VLD58_01210"
     CDS             3372..4031
                     /locus_tag="VLD58_01210"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB52936.1"
                     /translation="MIRLVDIEKSIPTKPSPTWLLRRVNLEFERGDFITIMGPSGAGK
                     STLLAILGMLDAEFKGEYWLGGQAVHALKPKDRLSLARASVGFVFQQYHLLDDLTVAE
                     NLDVPLSYRNVKSGERAALVADTLDRFNIVGKKDLYPRQLSGGQQQLVAVARAVIAKP
                     PVLLADEPTGNLHSAQGKEIMELFKQLNSAGTTIVQVTHSEENARYGHRVIQLKDGWV
                     L"
     gene            complement(4078..4455)
                     /locus_tag="VLD58_01215"
     CDS             complement(4078..4455)
                     /locus_tag="VLD58_01215"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HSB52937.1"
                     /translation="MRDFRELKVWQLAHQLALDTYKMTGGLPRQEMYGLTLQLRRSAV
                     SVGANIVEGSARHSDASMRQFLTIAHGSTAELEYLILIARDLGYLDSEAHEALSRRCV
                     DLRRMLSMFIRRLSSKPKPGHKT"
     gene            4561..>5791
                     /locus_tag="VLD58_01220"
     CDS             4561..>5791
                     /locus_tag="VLD58_01220"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSB52938.1"
                     /translation="MAPVPTPRILVADDQPDILQALRLLLKGEGFVVETTTSPGGVLS
                     ALERSDFDVLLMDLNYTRDTTSGLEGFDLLTRIQLLDASLPVVVMTAYGSVEGAVEAM
                     RRGARDYLEKPWDNNRLVTVLRTQVELGRALRRSQRLESENQTLRREGLPDLVAESPA
                     MRAVARLMERVAPSDANALILGEHGVGKEIAARWLHAASARAGKPMITVNVGGLSEGV
                     FESELFGHLKGAFTDAKADRIGRFELAEGGTLFLDEIANITPGQQAKLLRVLNTGEFE
                     RVGSSKTRRADVRVLSATNVDPRVEVAAGRFREDLLYRLNTIEILIPPLRNRREDIPP
                     LASQFLRRHAARYRKPITGFRADAMDALLRYGWPGNVRELDHTIERAVLLADSAEIRV
                     SDLALAPPADAGGRLDQM"
BASE COUNT          866 a         1941 c         2007 g          977 t
ORIGIN      
        1 cgggctccgg gtggcgaacg ccgcctacct cgaggcgatg cgcattccgc tcatccgcgg
       61 ccgctggttc accgaggggg acatgtcgcc ggtggcggga ccgatcgtca tcaaccgcac
      121 gctggcggaa cgctactggc cggggaaaga cccgctgggt caccggattt cgttcttcaa
      181 gagcgccgca gggcggagcg acttcggtac accggtcgag ggaacggtgg tcggcgtggt
      241 ggcagacgtg cggcagttcg ggctcgatca accgtccgat gccgcgatct atctacccca
      301 tacggtgaac ccctggggac acatatccct tgtggtccgg accgccgttc cgccctcgag
      361 cctgctggag ccggtgcgcc gggccttgct ggccgaggag ccggagctgg tgctcacggg
      421 cctcaacacc atggacgacc tggtatcggg ttcgctggcg ccgcgcgaat tcctcacggt
      481 gctggtgggc gtgtttgcgg cggcggcgct gggactcgca acgattggac tgtatggagt
      541 gctgagccgg ctggtgcgcg cgcgccagcg ggagatcggc atccggcggg cggtgggcgc
      601 cgacgagcga tcgatcatgg cgctcgtcct gcgggaaggg atgatcgcgg tggcaaccgg
      661 cgccggcggc ggactactgc tctccatcgg gctcgcccgt gcgctcacga gcctcctgtt
      721 cggcgttacg cccggggact cactcgccta catcgcggcg ctggcgctgc tggtgaccgt
      781 ggcgctcctg gcctgcctga ttccggcgcg ccgggccgcg cggatcgatc ccaccatcgc
      841 cctctcgagc gaatgaactc cggcctccca aagcaaggag cctgaatgtc cggattgttc
      901 cacgatatct ggcgcggcat ccgccgcctc tcgcaggctc cggtgttctc ggccgtcgtc
      961 atcgcgaccc tggcactggg tatcggcgtg aacgtcgcgc tcttcaccgt ggcagaccgg
     1021 gcgctgctgc gggccgtgcc ggccagtgaa cccgagcgcc tggttagggt atggcagacc
     1081 agccggctca accagatccg tctgtccctc tcgtatcagc agatccggga gctcgccggg
     1141 ctcggtagcc aggtagaggc tgccgcgggc tatgagacgg ggcggttcaa cgtctcgggg
     1201 aatggagatc cggtcgaggt tccgggactg gtggcgtcgg ctgatctctt ccgggtcctc
     1261 aagatctcgc ccaggctggg tcgggcgttt gcaccgtcgg aggagcacga ccaggtggtg
     1321 ctgctgagct accggtggtg ggttactcgc tggggcgccg atcccgaggt gctggggaag
     1381 gcgctcacca tcgagaatcg gagttacacg atcatcgggg tgctgccgcc cgaggccacc
     1441 tttcccagtg acacggagca gctctggctc ccgatcggcg tgcgcttcgc ggccgacccg
     1501 acgctcgaga ccgaccggcg gcggagccgg ttctccgcgg tgctgcggct ggcgccgggc
     1561 gcgaccctgg ggagcctgcg ctcagcgctc acggccgcag ccgcctccgc cagcggcacg
     1621 ggcgacacgg ccacggcgcg attcgagacc ggctatgccg ccgatctcct gaccgatgag
     1681 gtgagcagca catcgcggcc ggtgctcctg gtcctgctcg gtgcggcgct gctggtgctg
     1741 gtggccgctt cggccaacgc ggcggcgctc ctgatcgccc gagccacggg ccggcagcgg
     1801 gagatcgcgc tgaggcaggt actcggcgcc gggccggggc gcgtcctccg ggagctgctg
     1861 ctggagcatc tcctgctggc cctggccgcc ggggtggtgg gtggcctgct ggccgagtgg
     1921 ggattggctc tcctggccgg gacatggccg gccgcattgc cgagagtcag cctgagcgat
     1981 gccccattcc gggtactgct tttcaccgca ctcatttctc tcgtcactgg tgtcgccttc
     2041 ggcctggtgc ccgcgatgcg ggcagtcaat cccgacctcg agcgttcgct ccgggccgac
     2101 ggcacccgca ccagcggctc gcggcagcgt cgcaggctcc tcaatgggct ggtagccggc
     2161 cagctcgcgg tctcactggt gctcctggtc ggagcgggac tcctgctccg gagcttcatc
     2221 aggctcggcg cagtcgatcc cggtttcgac ccggcccatc tgctggcgat gcgggtccgc
     2281 ctcacgcctt cccgttatcc tggccgtcca tcgcaggacg cgttctatga cgcgctcgtg
     2341 agccggctcc aggcgctgcc gggcgtggat caggtaacga cgtcgaccgg gctgccactc
     2401 gccggctcca acgactacaa catcatcgat ccgagagaga tccgtcccga cgatccggaa
     2461 tcgatgctga tggtcgggat gttccgcgtg ggcgacgact ttccggctgc gctccggatg
     2521 ccgctgatcg agggccgtgg gctcacccgg gaggacaacc gctcatccag ccggagcgtg
     2581 gtgatcagcc ggggcctggc gctgcggttg tggggcgacc agccggcggt cggaaagcgt
     2641 attccccagg gcaccgagcc gctcaccgtg gtcggcgtgg cgcaggacct ccggttcggg
     2701 cgcctcgacg gcgaggtgca gccggcgatg tacctcccac tccggcagga atcggcggag
     2761 cggggcgagc tctggttcct gatccggttc tcgggcgatc cgatcccgct cgccgcgggg
     2821 gtgaagcagg cggtgcgttc ggtcgaccgg gaccagccga tcggcgaact ggtcagcatg
     2881 atggacgtcg tgtcccgctc gaccgcatcg cggcgcttca acctgctcct ggtgagtgtc
     2941 tttgccgggc tcgcgctcgg gctcgcagtt atcggtattg caggggtgac cgcctactcg
     3001 ctgagccagc ggacccggga actcgggatt cgcgtggcgc tgggcgccga ccgtgcgacg
     3061 ctgctcaagc tcggtctggg ggaggtagtg agggtggtgg cggtcggcgc cggggtgggg
     3121 ctcctgctgg cgctccttct tacccgggcg ctcggctcga tgttgtttgg ggttggccca
     3181 tccgatccgc tgagctatct ggccggcacg atggtcgttg ccggtgtggc cctggtggcc
     3241 tgctatgtcc cgatccatcg ggccgcgggc gccgatccga tcatcacctt gaaggcggaa
     3301 taggcctgac cggctggtcc gtctatcttc cggcgcggtg agtggccgga accccgaacc
     3361 gaggacgagt cttgattcgc ctagtcgaca tagaaaaatc gatcccgacc aagccgtctc
     3421 cgacctggct cctgcggcgg gtgaacctcg agttcgagcg gggtgacttc atcaccatca
     3481 tggggccctc gggcgcgggc aagtcgaccc tgctcgccat ccttggcatg ctggacgccg
     3541 agttcaaggg ggagtactgg ctgggcgggc aagcggtgca tgcgctcaag cccaaggacc
     3601 ggctgtcgct ggcgcgggcc agcgtggggt tcgtcttcca gcagtaccat ctgctcgacg
     3661 acctcaccgt ggccgagaac ctggatgtgc cgctcagcta ccggaacgtg aagtcgggcg
     3721 aacgcgcggc actggtggcg gacacactcg accgcttcaa catcgtgggg aagaaggatc
     3781 tctatccccg gcagctctcg ggcgggcagc agcagctggt ggcggtggcg cgggcggtga
     3841 tcgccaagcc gccggtgctc ctggccgacg agccgacggg gaacctgcat tcggcgcagg
     3901 ggaaggagat catggagctc ttcaagcagc tcaacagcgc cgggaccacg atcgtgcagg
     3961 tgacccactc ggaggagaac gcccggtatg ggcaccgggt gattcaactg aaggatgggt
     4021 gggtgttgta ggccgttggc ctcttggcca ttggccgtta gccattagcc gttaggtcta
     4081 cgtcttgtgg ccgggtttcg gctttgagct cagccgacga atgaacatgc tgagcatacg
     4141 ccgcaggtcg acgcaacggc ggctgagtgc ttcgtgggcc tcagaatcca ggtagcccag
     4201 gtccctcgcg atcaggatca aatactccag ctcggccgtg gaaccgtgcg caatcgtcag
     4261 gaactggcgc atggatgcgt cgctgtgacg ggccgagccc tcgacgatgt tcgcaccgac
     4321 ggaaaccgcc gaacggcgca gctggagcgt cagcccatac atttcctggc ggggaagccc
     4381 gccggtcatc ttgtaggtat cgagggccag ctggtgtgcc agctgccaga ccttcagctc
     4441 gcgaaaatcg cgcatggcga ctcttcgaga tcggggacga gacaatactc ctcgcaaccc
     4501 tcaacattgg atcaacgaag agccagtacc taatggctaa cggctaacgg ctaaaggctc
     4561 atggctccag tccccacccc ccgcatcctc gtcgccgacg accagcccga catcctccag
     4621 gccctgcgcc tcctgctcaa aggcgagggc ttcgtcgtcg agaccaccac ctcccccggt
     4681 ggggtactct ccgccctcga gcggagcgac ttcgacgtcc tcctcatgga cctcaactac
     4741 acccgcgaca ccacctccgg cctcgagggg ttcgacctcc tcacccggat ccagctgctc
     4801 gacgcgtcac tccccgtagt ggtcatgacg gcctacggca gcgtcgaagg ggcggtggag
     4861 gcgatgcggc gcggcgcccg cgactatctc gagaagccct gggacaacaa ccggctggtg
     4921 acggtgctcc ggacccaggt cgagctgggg cgcgccctgc ggcggagcca gcggctcgag
     4981 agcgagaacc agacgctccg ccgggaaggg ctccctgatc tcgtcgctga gtccccggcg
     5041 atgcgggcgg tggcgcggct gatggaacgg gtggcgccct ccgacgccaa cgcgctcatc
     5101 ctcggcgagc acggcgtcgg caaggaaatc gcggcacggt ggctccacgc ggccagcgcc
     5161 cgcgccggca agccgatgat caccgtgaac gtgggtggac tctccgaagg ggtcttcgag
     5221 agcgagcttt tcggccacct caagggtgcc ttcaccgacg ccaaggccga ccggatcggc
     5281 cgcttcgagc tggccgaggg tggaacgctc ttcctcgacg aaatcgccaa catcacgccg
     5341 ggccagcagg ccaagctcct ccgggtgctc aacaccggcg agttcgagcg ggtcggctcc
     5401 agcaagaccc gccgggccga cgtccgggtg ctctcggcca ccaacgtcga tccccgggtg
     5461 gaagtcgcgg ccggccgctt ccgcgaggac ctgctctacc ggctcaacac catcgagatc
     5521 ctgattccgc cgctccgcaa ccgccgggaa gacattccgc cgctggcaag ccagttcctc
     5581 cgccgtcatg ccgcgcgcta ccgcaaaccg atcaccggct tccgggccga cgcgatggac
     5641 gcgctgctcc gctacggctg gcccggcaac gtgcgcgagc tcgaccatac catcgaacgg
     5701 gcagtcctcc tcgccgacag cgccgagatc cgggtcagcg acctggcgct cgcgccgccg
     5761 gccgacgcgg gcgggcggct cgaccagatg a
//
LOCUS       DATIFF010000079         1758 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_10628, whole genome shotgun sequence.
ACCESSION   DATIFF010000079 DATIFF010000000
VERSION     DATIFF010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1758
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10628"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1343)
                     /locus_tag="VLD58_01225"
     CDS             complement(<1..1343)
                     /locus_tag="VLD58_01225"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB52939.1"
                     /translation="MADPVASLASALQDRYRIERQLGQGGMATVYLAQDLRNHRKVAL
                     KVLRPDLAALLGAERFLLEIETTANLHHPHILPLFDSGQAGDFLYYAMPFVPGESLRD
                     RLTRENQLPIADAVRIATDVADALDYAHRSGVLHRDIKPENILLHDGRALVADFGVAL
                     AMKNAGGTRLTETGLSLGTPQYMSPEQSAAERDLDPRTDVYALGAVTYEMLAGEPPFT
                     GNTTQAIIAKRMMETPRPISVLRKAVPPAVEAAVLRALEKLPADRPASAAAYAAALKE
                     TGRTAEVVPLPAKAGLRWRTAALVLSGVALSVFAIRGYLGAKASTATAALPTRVTIPL
                     GQDQLLEQDGLPFDLSADGSEIVYSAASEGKSQLYLRPIGSFQGTPIPGTEGARQPFF
                     SPDGAWIGYVANHRLEKVSRDGGAPLVIAEVPDQWFGAAWGRNGTIYFAEDDTSL"
     gene            complement(1436..>1758)
                     /locus_tag="VLD58_01230"
     CDS             complement(1436..>1758)
                     /locus_tag="VLD58_01230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52940.1"
                     /translation="DEELEQYLRLPAGYRSPVFSPAGRELAPVYSWALRLWPWEGKDL
                     LHGLVRVEARARPETIAHADRISRWLLAERSPVSTPDPRWDRLLYGIHAVEEYLRASA
                     HQHR"
BASE COUNT          271 a          567 c          647 g          273 t
ORIGIN      
        1 tagagcgagg tgtcgtcctc cgcgaagtag atggtgccgt tccgacccca cgccgccccg
       61 aaccactggt ccggcacctc ggcgatcacg aggggcgccc caccatcgcg ggagaccttt
      121 tccagcctgt ggttggcgac atagccgatc cacgcgccat cgggtgagaa gaacggttgc
      181 ctggctcctt cggtgccggg aatcggagtg ccctgaaaac tgccgatcgg ccgaaggtag
      241 agttgcgact ttccctccga cgcggccgaa tagacgatct ccgagccgtc ggcggacagg
      301 tcgaaaggca ggccatcctg ctccagcagc tggtcctgtc ccagcggaat ggtgacgcga
      361 gtcggaaggg ccgcagtcgc ggtcgaggcc ttggcgccga gataaccccg gatggcgaac
      421 acggacagcg ccacaccact cagtaccaac gccgcggtgc gccatctcag gccggccttg
      481 gcgggcagcg gaaccacctc cgcggtccgg ccggtctcct tgagcgcggc agcgtaggca
      541 gcggcgctgg ccgggcggtc ggcgggcagt ttctccagcg cccgcagcac ggccgcctcg
      601 acggcgggcg gcaccgcttt ccgcagcacc gaaatcggcc ggggcgtctc catcatccgc
      661 ttggcgatga tcgcctgggt ggtgtttccc gtgaacggcg gctcaccggc aagcatttcg
      721 taggtgactg ccccgagggc gtagacatct gtgcggggat cgaggtcgcg ctcggcagcc
      781 gactgctcgg gactcatgta ttgcggcgtg ccgaggctca ggccggtttc ggtgaggcgg
      841 gtgccgccgg cgttcttcat cgccaacgcg accccgaaat ccgccaccag ggcgcgaccg
      901 tcgtggagca ggatgttctc gggcttgatg tcacggtgca gcacgccaga gcggtgggca
      961 taatcgagcg catcggcgac gtcggtcgcg atccgcaccg cgtcggcgat ggggagctgg
     1021 ttctcgcggg tcagccggtc gcggagcgac tcacccggca cgaacggcat ggcgtagtag
     1081 aggaagtcgc cggcctgtcc gctgtcgaac agcggcagga tgtgggggtg gtggaggttg
     1141 gcggtggttt cgatttccag gaggaagcgc tcggcgccga gaagggcggc gagatcggga
     1201 cgcagcacct tgagcgcgac cttgcggtgg ttccgaagat cctgggcgag gtagaccgtg
     1261 gccatgccgc cctggccgag ctgacgctcg atgcggtagc ggtcctgcag ggcgctggcc
     1321 aggctggcga ccgggtcggc catggagcct caggggtggg gtctcgcgct gcaatgtggg
     1381 gcccagccga aggtcccgcc agctgctcgt gcaccaccgc cgctgctatg gagcgtcagc
     1441 gatgctggtg cgcgctggcg cggaggtatt cctccaccgc gtggatcccg tagagcagcc
     1501 ggtcccaccg cggatcgggt gtgctcaccg gcgaccgctc ggccaggagc cagcgggaga
     1561 tccggtcggc gtgcgcgatg gtctcggggc gggcccgcgc ctcgacccgg accaacccgt
     1621 gcagcaggtc ctttccttcc cacggccaga ggcggagggc ccaggagtag accggcgcga
     1681 gttcccgtcc ggcgggagag aacaccggtg agcggtaccc ggcggggaga cggagatact
     1741 gctccagctc ttcgtcgg
//
LOCUS       DATIFF010000080         1629 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_626349, whole genome shotgun sequence.
ACCESSION   DATIFF010000080 DATIFF010000000
VERSION     DATIFF010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_626349"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..728
                     /gene="trmFO"
                     /locus_tag="VLD58_01235"
     CDS             <1..728
                     /gene="trmFO"
                     /locus_tag="VLD58_01235"
                     /inference="COORDINATES: protein motif:HMM:NF003739.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methylenetetrahydrofolate--tRNA-(uracil(54)-
                     C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO"
                     /protein_id="HSB52941.1"
                     /translation="AVPYFEGCLPVEEMARRGPETLRFGPMKPVGLPDPRTGHDPYAV
                     VQLRREDRAGQMWNLVGFQTRLRIPEQQRVFGMIPGLGGAEFLRYGSIHRNSYINSPA
                     FLGVGLTAKDDDTLFFAGQLTGVEGYTESLGTGLLAGINLARRLTGKPVAVPPPTTML
                     GALYRYLREADPTRFQPMNANWGLVEPLPGGQAAKRRPSAFGSAERDPARGSPSGQGG
                     KDAKKQLLVERAQVDFAEWLRTL"
     gene            839..>1629
                     /locus_tag="VLD58_01240"
     CDS             839..>1629
                     /locus_tag="VLD58_01240"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HSB52942.1"
                     /translation="MAAFLEHLEKERQVSEHTVKAYRRDLEAFAEFLDRHTGGDWSFA
                     RVDRLGIRGYLGEMQRRGLSKRSMARALSSVRSLYRFLQAHQGLEKSPVRAAKAPRLE
                     RHLPGYLDRGRTETLFAGAEARAATGEPAAVRDLAILELFYSSGLRLSELTGLNLLDL
                     DLLSDQVKVRGKGRKERLVPLGSRASRALRHYLELRETIAAVPGGDKRAVFLGRRGKR
                     LTPRTVQRLVHRALDTVGGESLKTHSLRHTFATHLLDAGADLRAV"
BASE COUNT          269 a          554 c          569 g          237 t
ORIGIN      
        1 acgcggtgcc ctatttcgaa ggctgcctcc cggtcgagga aatggcccgg cgcgggcccg
       61 agaccctccg cttcgggccg atgaagccgg tggggcttcc ggatccgcgc accgggcacg
      121 acccctatgc ggtggtgcag ctgcggcgcg aagaccgcgc cggacagatg tggaacctgg
      181 tcgggttcca gaccaggctc cggatcccgg agcagcagcg ggtattcggg atgatccccg
      241 gactcggcgg cgccgaattc ctccgctatg gcagcatcca ccggaacagc tatatcaaca
      301 gtccggcatt tctcggcgtg ggactcacgg cgaaggatga cgacaccctc ttctttgccg
      361 gacagctgac cggcgtcgag ggatacaccg aatcgctggg aaccggtctc ctcgccggca
      421 tcaatctcgc ccggcggctc accggcaagc ccgtcgcggt gccgccaccc accaccatgc
      481 tgggtgcgct ctaccgctat cttcgagaag ccgacccgac ccgattccag ccgatgaacg
      541 cgaactgggg actggtggag cccctgccgg gcggccaggc ggcgaagcgg cgaccgagcg
      601 ccttcgggag cgcggagcgc gacccggcgc gagggagtcc ttcagggcag ggcggcaagg
      661 acgcgaagaa gcaactcctc gtcgaacggg cccaggtcga tttcgcggag tggctgagaa
      721 ccttgtgaaa agcaccgaga gcctgaccgc ccgacaacga ccgagcgccc ttgggagccc
      781 gcagggcgac ccggcgcgag ggagtccttc agggcctgac cgcccgtcca acccggacgt
      841 ggccgccttt ctcgagcatc tcgagaagga gcgtcaggtg tcggaacaca ccgtcaaggc
      901 gtatcggcgc gacctcgagg cgttcgccga attcctggac cggcacaccg gtggcgactg
      961 gtccttcgcc cgagtcgacc ggctgggcat ccggggctac ctgggcgaga tgcagcggcg
     1021 aggtctctcg aaacggtcga tggcgcgagc cctctcttcc gtacggtcgc tgtatcgctt
     1081 cctgcaggcg caccaggggc tcgagaaatc gccggtgcgg gcggcgaagg ccccgcgtct
     1141 cgagcgccac ctgccaggct acctcgaccg aggccggacc gagaccctgt tcgcgggggc
     1201 cgaggcccgt gctgccaccg gggagcctgc ggccgtgcgg gatctcgcga tcctggagct
     1261 cttctactcg agcgggctcc ggttgtcgga actcaccgga ctcaatctcc tcgacctcga
     1321 cctcctgagt gatcaggtga aggtgcgggg aaaaggccgg aaggaacggc tggtgccgct
     1381 gggatcccgc gcgagccggg cgctcaggca ctatctcgag ctgcgtgaga ccatcgcagc
     1441 ggtgccgggc ggcgacaagc gggcggtatt cctgggccgg cgcgggaagc ggctgacgcc
     1501 ccggacggtc cagcgcctgg tgcaccgcgc cctggatacc gtgggcggcg agtcgctcaa
     1561 gacccactcg ctcaggcaca cgttcgcgac tcacctgctc gatgcggggg ccgatctccg
     1621 ggcggtgca
//
LOCUS       DATIFF010000081         1011 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1550079, whole genome shotgun sequence.
ACCESSION   DATIFF010000081 DATIFF010000000
VERSION     DATIFF010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1550079"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..987)
                     /locus_tag="VLD58_01245"
     CDS             complement(<1..987)
                     /locus_tag="VLD58_01245"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSB52943.1"
                     /translation="MALAFALGLLFAGLLDLPSRSAAQESHLAVAIPPVQAPSIPAAK
                     PLVELSDAFSAVADHVRPSVVYIRSQRTERPSQRRLPPGMERFFPRFGPNRPELEQGS
                     GSGFIVSADGYILTNNHVVEGAETVIVRLLDRREFKAKIVGTDPNTDVAVLKVDARGL
                     PPVALGNSDDAHVGSWVLAIGNPLGEGLTFTVTSGIVSAKGRALNGLPGRGAGSIQDF
                     IQTDAAINPGNSGGPLVSVRGEVIGINSAIASETGFYSGYGFAIPINLARTVMTQLIE
                     SGKVHRAALGVSIADVSINDAQYVGLPEIRGVVVKDIPNDDSPAKAAGIEPGD"
BASE COUNT          153 a          338 c          365 g          155 t
ORIGIN      
        1 gtcaccgggc tcgatgccgg cagccttggc cggcgagtcg tcgttgggga tgtccttgac
       61 cacgacgccc cggatctcgg gaagcccgac gtactgcgcg tcgttgatcg acacgtcggc
      121 gatggagacc cccagcgcgg cccggtgcac cttgcccgac tcgatgagct gggtcatgac
      181 cgtacgggcc aggttgatgg ggatggcaaa cccgtagccg gagtagaaac cggtctcgct
      241 ggcgatggcc gagttgatcc cgatcacctc gccccggacg ctcaccagcg ggccgccgga
      301 gttgccgggg ttgatggcgg cgtccgtctg gatgaagtcc tggatgctgc ctgcgccgcg
      361 gcccggcagg ccgttgagcg cgcggccctt ggcgctcacg atgcccgagg tgaccgtgaa
      421 ggtgagcccc tcgccgagtg ggttgccgat ggccagcacc cagctgccga catgggcgtc
      481 gtcactgttg ccgagcgcca cggggggaag ccccctggca tccaccttga gcactgccac
      541 gtcggtgttg ggatcggttc cgacgatctt ggccttgaac tcccgccggt cgagcagccg
      601 cacgatgacg gtctcagccc cctcgacgac gtggttgttg gtcaggatgt agccgtcggc
      661 ggagacgatg aacccggacc cgctgccctg ttccagctcg ggccggttgg gtccgaagcg
      721 gggaaagaac cgctccatcc ccggcggcaa ccgccgctgg ctcggccgct ccgtgcgctg
      781 cgaccggatg tacaccacgc tgggccgcac gtgatcggcc acggcggaga aggcgtcgct
      841 cagctccacg agcggcttgg cggcgggaat cgagggcgcc tgcaccgggg ggatcgccac
      901 ggccaggtgg ctctcctgcg cggcggagcg gctgggaagg tcgagcagcc ccgcaaagag
      961 gaggccgagc gcgaaggcca gcgccaccag gccgccgaat ttcagccagt t
//
LOCUS       DATIFF010000082         2579 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_319551, whole genome shotgun sequence.
ACCESSION   DATIFF010000082 DATIFF010000000
VERSION     DATIFF010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2579
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_319551"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2579
                     /gene="gcvP"
                     /locus_tag="VLD58_01250"
     CDS             <1..>2579
                     /gene="gcvP"
                     /locus_tag="VLD58_01250"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HSB52944.1"
                     /translation="RFTSRHIGPRPQDIQEMVETLGHESLDDLVDAVVPEEIRLRRPL
                     ALPKGKSERDVLRSLRHLAAQNEVFRSYLGMGYHGTFTPQVIQRNILENPGWYTAYTP
                     YQAEISQGRLEALLNYQTMVADLTGLPIANASLLDEATAASEAVWMTEAVAAKRPAPA
                     FLVDQACHPQTIAVVRTRARVRGIAIRIGPADRFELEPDVIGMLVQYPTTDGLIADYR
                     DLCRRAHEAGALVTVATDLLALTLLAPPGEWGADIVVGSSQRFGVPMGYGGPHAAFFA
                     TRDQYKRHMPGRIIGVSRDVTGGPALRMALQTREQHIRRDKATSNICTAQVLLAVMAS
                     MYAVYHGPDGLRRIAERVHGFTLLLATALRRLRYRLVHDHFFDTLCIEVERWALPGIV
                     DAARARRINLRVLSPTQLCVALDEAVTLNDVADLIAVFSLDETLPFMLDQLAPDIGPA
                     IPEALRRTSAYLAHPVFHLHHSETEMLRYIRRLEGRDLSLTEAMIPLGSCTMKLNATT
                     EMMPVSWREFNRLHPFAPRDQTAGYLRLFQQLRFQLAEITGFAAVSLQPNAGSQGELT
                     GLLVIRAYHESRGEAHRKKCLIPLSAHGTNPASAVMAGFEVVTVKSDAKGNIDVKDLQ
                     AKATANAAELAGIMVTYPSTHGVFEPSIREICRIVHEAGGQVYLDGANLNAQVGLCRP
                     GDYGADVCHLNLHKTFCIPHGGGGPGMGPIAVAAHLAPFLPDHPVVHVGGPQACGTVA
                     AAPWGSAAILPISWAYIALMGWDGLTEATKVAILNANYVAHRLKGHYELLYSGAAGLV
                     AHECIIDTRPFKQSADVEVEDIAKRIIDYGFHPPTVSFPVPGTLMIEPTESESKEELD
                     RFC"
BASE COUNT          402 a          948 c          861 g          368 t
ORIGIN      
        1 acgcttcacc tcccgtcaca tcggcccccg cccccaggac atccaggaga tggtggagac
       61 cctgggccac gagtcgctcg acgacctggt cgacgcggtc gtgcccgagg agatccgcct
      121 ccgccgtccg ctggcgctcc ccaaggggaa gagcgagcgc gacgtgctgc gctcgctccg
      181 gcacctcgcc gcccagaacg aggtgtttcg atcgtacctc ggcatgggct accacggcac
      241 gttcacgccc caggtgatcc agcgaaacat cctggagaac cccgggtggt acacggccta
      301 cacgccctac caggccgaga tcagccaagg ccggctggag gcgctgctca actaccagac
      361 gatggtcgcg gacctcaccg ggctcccgat cgccaacgcc tcgctgctcg acgaggccac
      421 ggcggcatcc gaggccgtgt ggatgaccga ggcggtcgcg gccaagcggc ccgcgccggc
      481 cttcctcgtg gaccaggcct gtcatccgca gaccatcgcg gtcgtgcgca cccgcgcccg
      541 ggtgaggggc atcgcgatcc gcatcggccc ggccgaccgg ttcgagctcg agcccgacgt
      601 gatcgggatg ctggtccagt acccgacgac cgacgggttg atcgccgact accgggacct
      661 ctgccgccgg gcgcacgagg cgggcgcgct cgtgaccgtg gccaccgacc tcctcgccct
      721 caccctgctc gctccgccgg gcgagtgggg cgcggacatc gtggtcggca gctcgcagcg
      781 gttcggcgtg cccatgggat acggcggccc gcatgcggcg ttcttcgcca cccgggacca
      841 gtacaagcgg cacatgccgg gacgcatcat cggcgtgagc cgggacgtga ccggcgggcc
      901 cgcgctccgg atggcgctcc agacccggga gcagcacatc cggcgggaca aggccaccag
      961 caacatctgc acggcgcagg tgctgctcgc ggtcatggcc agcatgtacg cggtctacca
     1021 cggacccgac gggctccggc ggatcgcgga gcgggtgcac ggcttcaccc tgctgctggc
     1081 gacggcgctc cggcgcctgc gctatcgcct ggtgcacgac cacttcttcg acacgctctg
     1141 catcgaggtc gagcgctggg cgctgcccgg aatcgtggac gcggcccgcg cgcgccggat
     1201 caacctgcgg gtgctctcgc ccacccagct ctgcgtggcg ctggacgagg cggtgacgct
     1261 gaacgacgtc gccgacctca tcgcggtgtt ctccctggac gagacgctgc cgttcatgct
     1321 ggaccagctg gccccggata tcggacccgc cattcccgaa gcgctgcgcc gcacgagcgc
     1381 ctacctcgcc catcccgtct tccacctgca ccactcggag acggagatgc tgcgctacat
     1441 ccggcggctc gagggccggg acctctcgct caccgaggcg atgatcccgc tcggctcgtg
     1501 caccatgaag ctcaacgcca cgaccgagat gatgccggtg agctggcgcg agttcaaccg
     1561 gctgcacccg ttcgccccgc gggaccagac cgcgggctac ctccggctct tccagcagct
     1621 ccgcttccag ctggccgaga tcaccggctt cgccgcggtg tcgctccagc ccaacgccgg
     1681 ctcccagggc gagctcaccg gcctgctggt gatccgcgcg taccacgagt cccggggcga
     1741 ggcgcaccgg aagaagtgcc tgatcccgct gtcggcgcac ggcaccaacc cggcgagcgc
     1801 ggtgatggcg gggttcgagg tggtgacggt gaagtcggac gcgaagggga atatcgacgt
     1861 caaggatctc caggcgaagg cgacggcgaa cgccgccgag ctcgccggga tcatggtcac
     1921 ttatccctcc acgcacggcg tgttcgagcc atcgatcagg gagatctgcc ggatcgtgca
     1981 cgaggccggg ggccaggtgt acctcgacgg cgccaacctc aacgcgcagg tcgggctctg
     2041 ccgcccgggc gactacggcg cggacgtctg ccacctgaac ctgcacaaga cgttctgcat
     2101 cccgcacggc gggggcggtc ccggcatggg gccgatcgcc gtcgccgccc acttggcgcc
     2161 gttccttccc gaccatccgg tggtgcacgt aggcggaccg caggcctgcg gtaccgtcgc
     2221 ggccgcgccc tggggcagtg ccgccatcct gccgatctcc tgggcctaca tcgcgctgat
     2281 gggctgggac gggctcaccg aagccaccaa ggtcgccatc ctgaacgcga actacgtcgc
     2341 gcaccggctc aaggggcact acgagctcct ctacagcggg gccgccggcc tcgtggcgca
     2401 cgagtgcatc atcgacaccc gccccttcaa gcagtcggcc gacgtggaag tcgaggacat
     2461 cgccaagcgg atcatagact acggcttcca tccgcccacg gtgtcgttcc cggtgccggg
     2521 cacgctcatg atcgagccga ccgagagcga gtcgaaggag gagctggacc gcttctgcg
//
LOCUS       DATIFF010000083         6088 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_627059, whole genome shotgun sequence.
ACCESSION   DATIFF010000083 DATIFF010000000
VERSION     DATIFF010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6088
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_627059"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1179)
                     /gene="hflX"
                     /locus_tag="VLD58_01255"
     CDS             complement(<1..1179)
                     /gene="hflX"
                     /locus_tag="VLD58_01255"
                     /inference="COORDINATES: protein motif:HMM:TIGR03156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HSB52945.1"
                     /translation="MRQLITIEPPAERAILVGAPRKGSDDAEHLTEHLDELARLADTA
                     GALVVGRLSQQVAAPNPATLIGEGKVEELRAMAEAERGTLVVFDEELTPNQGANLESE
                     LKVRVMDRSELILDIFSTRARTHEAKLQVELAQLEYLLPRLARMWTHLSRIRGGIGLR
                     GPGETQLETDRRMIRKKIQLLREKLREWEKHRVVLRAGRSPMLNVALVGYTNAGKSSI
                     LRMLSGEHDIFVEDRLFATLDTLTREVDLGDGCKARVSDTVGFIRKLPHHLVASFRAT
                     LEEVREAEVLLHVVDSSHPGWEEQMVVVDQVLADIGVSTQPVLPVFNKMDQVRDPGAF
                     SARARELYPEALFASTMRIDGLDQLKNELRGRERLLRPPVTVQVPLADGARLASLYRL
                     G"
     gene            complement(1195..1656)
                     /locus_tag="VLD58_01260"
     CDS             complement(1195..1656)
                     /locus_tag="VLD58_01260"
                     /inference="COORDINATES: protein motif:HMM:NF015147.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LEA type 2 family protein"
                     /protein_id="HSB52946.1"
                     /translation="MKRLLIFAAVGLLACGPGTVNPAELIQPKVQLHHLALRNAGLTG
                     GTLDVVLAFHNPNKITLKGVGLSAGLDIEGSHFGDVAMTEPFSLAGKDTTLVTVPLGF
                     KWSGVASAARSMLNSGAVNYGIQGKVTINTPANVPFDVPFSGQGSVPLLRP"
     gene            complement(1763..3079)
                     /locus_tag="VLD58_01265"
     CDS             complement(1763..3079)
                     /locus_tag="VLD58_01265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HSB52947.1"
                     /translation="MSAPSLFAVPEPLAARMRPRTLEECLGQEHLLAPGRPLGDAIRR
                     GDVGSCIFWGPPGTGKTTIARLIAHYTEREFVELSAVLDGVPRVKEIVREAEQRRVLG
                     RGTVMFCDEIHRFNRAQQDAFLPHVERGTITLIGATTENPSFELNGALLSRCQVWVLQ
                     PLTVAQVTSLLARALVDPERGLGHLGLETEAGALELLAEQVDGDARRALTVLENAARQ
                     VGPRGTLTKEGVVEALARRVPNYDKSGEEHFNMLSAYHKSLRGSDPQGALYWMARMIE
                     GGEDPMVLFRRAIAMAAEDVGLADPEALKLAIAARDAYHMLGPPEGYLPLAEMTIYLA
                     TAPKSNRSAMGLWGALEAARKNPAEPVPLHIRNAPTGLMKDLGYGKGYQYAHNSPTGF
                     IPQEYLPDKLRGQAFYQPGELGFEKRIRERMEWWDRQRQGKGSEGE"
     gene            complement(3158..3868)
                     /locus_tag="VLD58_01270"
     CDS             complement(3158..3868)
                     /locus_tag="VLD58_01270"
                     /inference="COORDINATES: protein motif:HMM:NF014582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HSB52948.1"
                     /translation="MLFALVAALGNLLGGYAVVRHERRSLAVIDHFIGFGAGFMLSVA
                     LLEVAPEAISRRSDAPIFILTGYLLVHLVQHVLVPHFHFGEETHTLSASQGISALIGL
                     LLHTFFDGVAIASGFLVSDQIGLLLFLAVFLHKLPEGVTMTSVMLAGKQSRARALGAS
                     ALLGVATLVGVGLTEKSGPLVAHGLALSAGVTIYVAASNLVPELQKRKGWGMPLAFFI
                     GAAAFFVTRALVEAAGVN"
     gene            complement(3874..5082)
                     /locus_tag="VLD58_01275"
     CDS             complement(3874..5082)
                     /locus_tag="VLD58_01275"
                     /inference="COORDINATES: protein motif:HMM:NF025112.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HSB52949.1"
                     /translation="MTFPDTLDIPPDVLEIARTLETAGFEAWCVGGAVRDTLLGVPNT
                     DYDVATSARPEQVKELFKKTIAVGERFGTVGVYIRRRTYEVTTFRRDVQTDGRHAVVE
                     YGASLEEDLARRDFTINAIAYQPLRHEWSDPFEGEADLDRKLVRAVGDAAERFREDYL
                     RILRAIRFAARFDFAIEDATWAAMREQVSGLGQLSAERVREEWFKGLMTARSLTRLIE
                     LWLTSGAAAVWLPELLTGRLAGRATMLPALEALVGAGAARDPVLLTILLCLDPVSVLV
                     RLKASRADIARAAAVLSGAPEPDGTDQVSVRRWMAAVGDAVNDLMDVWQFQHGARPLW
                     APVVKGISERNEPLTRKQLAVTGDDLRAAGYPPGPEMGRLLDRLLGLVVDDPSLNTRD
                     GLLAKARELS"
     gene            complement(5086..6045)
                     /locus_tag="VLD58_01280"
     CDS             complement(5086..6045)
                     /locus_tag="VLD58_01280"
                     /inference="COORDINATES: protein motif:HMM:NF012913.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HSB52950.1"
                     /translation="MIHLLFTGGTISMTRDERAGGNVPTHGGATLVAFAPELGSISPY
                     RIDDWGRFPACHMGPAKLWELRNRVRAVMQGDAGEPPQGIVITHGTDTIEETAYLLSR
                     TLPAETPVVITGAMRTSSDEGWDGPRNLTDSVRVAADPSSRGRGTMVVFAGQILAGAT
                     ACKVEATALDAFEAPHTGPIGWVNQNVVEWADNPAASPPGVIDAPGLTARVAHVPMIV
                     GDLGEMLDLSRKSFDGVVIEAFGSGNVPPGALSAIRRWIAEGKPVVLASRCARGEVHP
                     VYAFPGGGATLVREGVIPAGPRTPSQARMELAICLSAGHTYGR"
BASE COUNT          987 a         2144 c         2012 g          945 t
ORIGIN      
        1 gcccagccgg tagagtgacg ccagccgagc cccgtcggca agcggcacct gcaccgtcac
       61 tggcggccgg agaaggcgct cccggccccg cagctcgttc ttcaactgat cgaggccgtc
      121 gatccgcatc gtgctcgcga agagcgcctc gggatagagc tcccgcgccc gcgcggagaa
      181 ggcgccggga tcgcgcacct ggtccatctt gttgaagacc ggcagcaccg gttgagtcga
      241 caccccgatg tccgccagca cctgatcgac caccaccatc tgctcctccc acccgggatg
      301 gctcgagtcg accacgtgga gcagcacctc ggcctcgcgc acctcttcga gggtcgcgcg
      361 gaagctcgcc accagatggt ggggcagttt gcggatgaag ccgacggtat cggacacccg
      421 cgccttgcac ccgtcaccca gatccacttc ccgggtgagc gtgtcgagcg tggcgaagag
      481 gcggtcttcc acgaagatgt cgtgctcgcc cgaaagcatc cggaggatgc tcgacttgcc
      541 ggcattggtg tagccgacca gcgccacgtt gagcatcggc gagcgcccgg cccgcagcac
      601 cacccggtgc ttctcccact cccggagctt ctcccgcagg agctggatct tcttgcggat
      661 catccggcgg tcggtttcca gctgggtttc gcccgggccc cggagcccga tgccgccgcg
      721 gatacgggaa aggtgggtcc acatccgcgc caggcgcggc agcaggtatt cgagctgcgc
      781 cagctcgacc tggagcttgg cttcgtgggt ccgtgcccgg gtcgagaaga tgtcgaggat
      841 gagctcggag cggtccatga cccggacctt gagctcgctc tcgaggttgg cgccctggtt
      901 gggcgtcagc tcctcgtcga acaccaccag cgtgccccgc tccgcctccg ccatcgcgcg
      961 gagttcttcg accttgcctt cgccgatcag ggtggcagga ttgggcgcgg caacctgctg
     1021 cgacagccgg ccgaccacca gcgcgccggc ggtgtcggcg aggcgggcca gctcgtcgag
     1081 gtgttcggtg aggtgttcgg catcatcgga gcccttgcgc ggggctccaa ccaggatggc
     1141 gcgttcggcc ggtggttcga tggtgatcag ctgacgaatg ggacgttctc cgcgttacgg
     1201 acgaagcagg ggaacactcc cctgacccga gaacggcaca tcgaacggca cattcgcggg
     1261 agtgttgatc gtgaccttgc cctggatccc gtagttcacg gcacccgagt tgagcatcga
     1321 ccgcgcggcg cttgccacac cgctccactt gaagccgagc ggcaccgtga ccagcgtggt
     1381 gtccttccct gccagcgaga acggctcggt catcgcgacg tcaccgaagt gactcccctc
     1441 gatgtcgagc ccggccgaca agcccacgcc cttgagggtg atcttgttgg ggttgtggaa
     1501 cgccagcacc acgtcgagcg tcccaccggt gagccccgca ttgcgaagcg ccaggtggtg
     1561 cagctgcacc ttgggctgga tcagctccgc gggattcacc gtgccggggc cgcaggcgag
     1621 aagacccacc gcggcgaaga tcagtaagcg tttcatggcc ggaatatacc tccgtgtacg
     1681 ggttgggatc gggcgggctg ctcaatgcgg cgcatccgca ggatcgactc ctgtccccgc
     1741 cctgatcccg tcgttccgca cctcactccc cctccgaacc ctttccctgc cgctgccggt
     1801 cccaccactc catccgctcc cggatccgct tctcgaaccc gagttccccc ggctggtaga
     1861 acgcctgccc ccgcaacttg tccgggagat actcctgcgg aatgaagccg gtgggagagt
     1921 tgtgggcgta ctggtacccc ttcccgtacc ccaggtcttt catcaggccg gtgggcgcgt
     1981 tgcggatgtg aagcggtact ggttccgccg gattcttccg tgcggcctcg agggcacccc
     2041 agaggcccat cgccgaccgg ttggatttgg gcgccgtggc gaggtagatc gtcatctcag
     2101 cgagcggcag gtagccttcc ggggggccca gcatgtggta ggcgtcccgc gccgcaatgg
     2161 cgagcttgag cgcctccgga tcggcgagcc ccacatcctc cgccgccatc gcgatagccc
     2221 ggcggaagag caccattggg tcctcgcccc cttcgatcat ccgggccatc cagtaaaggg
     2281 ccccctgcgg gtcactcccc cggagcgact tgtgataggc ggagagcatg ttgaagtgct
     2341 cttcgccgct cttgtcgtaa ttgggcaccc gccgggccag cgcctcgacc accccttcct
     2401 tggtgagggt gccgcggggt cccacctggc gcgcggcatt ctccagcacc gtgagggccc
     2461 gccgggcgtc gccatcgacc tgctcggcca gcagttcgag cgcgcccgct tccgtctcga
     2521 ggccgaggtg accaagtccc cgctccgggt ccaccagcgc ccgggcgagg agcgaggtta
     2581 cctgcgccac ggtgagcggc tgcagcaccc acacctgaca gcgcgagagc agcgccccgt
     2641 tgagttcgaa gctggggttt tcggtggtgg cgccgatcag cgtgatggtg ccccgctcga
     2701 cgtggggcag gaaggcatcc tgctgggccc ggttgaagcg gtgaatctcg tcgcagaaca
     2761 tcaccgtccc ccgccccagc acccggcgct gttccgcctc gcgcacgatc tctttgaccc
     2821 gcgggacgcc gtcgagcacc gcggaaagct cgacaaactc ccgctcggta tagtgggcga
     2881 tcaggcgggc gatggtggtc ttcccggtcc cgggtgggcc ccagaagatg cagctcccca
     2941 catcaccccg gcgaatggca tcgccgaggg gacggcccgg cgccagcagg tgctcctggc
     3001 ccaggcactc ttcgagcgtc cggggccgca tccgggcggc gagaggttcg gggacggcga
     3061 aaagggaggg ggcggacatg ttgggaagtt aaggggggcc ggaggccggg ggccgggggc
     3121 aggagctccg gcctccgccg gcctccggac tccagcctca gttcactcca gcagcctcca
     3181 ccagggcgcg tgttacaaag aacgcagcgg ccccaatgaa gaaggccaaa ggcatccccc
     3241 accctttccg cttctgaagc tccgggacca ggttgctcgc cgccacgtag atcgtcaccc
     3301 cggccgaaag cgccaggccg tgggccacga gcgggccgct cttctcggtg agccccaccc
     3361 cgaccagggt cgcgaccccg agcagcgcgg atgcgcccag ggcgcgggcg cggctctgtt
     3421 tgccggccag catgacactg gtcatggtga ccccttcggg gagcttgtgc aggaagaccg
     3481 cgagaaagag gagcaggccg atctgatcgg agaccaggaa gccggaggcg atggccacgc
     3541 cgtcgaagaa ggtgtgcagc aggagcccga tcagcgccga gataccctgc gaggcgctca
     3601 gcgtgtgggt ctcttccccg aaatggaaat gcggcaccag cacatgctgc accagatgca
     3661 ccaggagata gcccgtcaga atgaagatcg gtgcatcgct ccgccgggag atcgcctcgg
     3721 gcgccacctc gaggagcgcc accgagagca tgaaccccgc gccaaaaccg atgaaatgat
     3781 caatgaccgc gagactccgc cgttcgtggc gcaccacggc atacccgccc agcaggttgc
     3841 cgagcgccgc gaccagcgca aagagcatgg cgctcacgag agttccctcg cctttgccag
     3901 cagcccatcg cgggtgttga gcgaggggtc gtccactacc aggcccagca gccggtcgag
     3961 gaggcgcccc atctcggggc cgggaggata gcccgcggcg cgaaggtcgt cgccggtcac
     4021 cgccagttgc ttccgggtga gcggctcatt ccgctcgctg atgcctttca ccaccggcgc
     4081 ccagagcggc cgggcgccat gctggaactg ccagacgtcc atgaggtcgt tcaccgcgtc
     4141 gcccaccgcc gccatccagc ggcgcaccga gacctggtcg gtgccatcgg gttcgggcgc
     4201 gccgctcagc acggccgcgg ccctcgcgat gtctgcccgg gaggctttga gccgcaccag
     4261 cactgagaca ggatcgaggc agaggagaat cgtgagcagc accggatcgc gcgcggcgcc
     4321 ggcgccgacc agggcttcca gcgcgggcag catcgtggcg cgcccggcca gccggccagt
     4381 caggagttcc ggaagccaga cggcggccgc cccgctcgtg agccagagct cgatcagccg
     4441 ggtaagcgac cgcgccgtca tcagcccctt gaaccactct tcccgcaccc gctcggcgga
     4501 gagctggccc agcccgctca cctgctcccg catcgcggcc caggtcgcgt cctcgatggc
     4561 gaaatcgaac cgggccgcga accggatcgc gcggaggatc cggagataat cctcccggaa
     4621 ccgctcggcc gcatcgccca cggcccggac cagcttccgg tcgaggtccg cctctccctc
     4681 gaatggatcg ctccattcgt ggcgcagtgg ctggtaggcg atggcattga tggtgaagtc
     4741 ccgccgggcg aggtcctctt ccagcgaggc gccgtactcg accaccgcgt gccgtccgtc
     4801 ggtctgcacg tcccggcgga aggtggtgac ctcgtaggtg cggcgccgga tgtagacccc
     4861 cacagtgccg aaccgctcgc ccaccgcgat ggtcttcttg aagagctctt tgacttgctc
     4921 cggcctggca gaagtggcca cgtcgtaatc ggtgttggga acgccgagca gggtgtcgcg
     4981 caccgccccg ccgacgcacc acgcctcgaa cccggccgtc tcgagcgtcc gggcgatctc
     5041 gaggacatcg ggcggaatgt cgagcgtgtc gggaaaagtc atgggctacc gcccataagt
     5101 gtggccggcc gagagacaga tcgcgagctc catcctcgcc tgactcgggg tgcgcggacc
     5161 ggcgggaatc acgccctcgc gtaccagcgt ggcgccacca cctggaaagg catacaccgg
     5221 gtgcacctca ccccgggcgc agcgcgaagc cagcaccacc ggcttcccct cggcgatcca
     5281 ccggcgaatc gcggaaagcg cacccggcgg cacattgccg ctgccgaagg cttcgatcac
     5341 cactccgtcg aagctcttcc gggaaagatc gagcatctcc cccaggtcgc ccacgatcat
     5401 cggtacgtgg gctacccgag cggtgagccc gggggcatcg atgacacccg gcggcgatgc
     5461 ggccgggttg tcggcccact ccaccacatt ctggttcacc cagccgatcg gcccggtgtg
     5521 gggcgcctcg aacgcgtcga gcgcggtcgc ctcgaccttg caggcagtgg ctcccgccag
     5581 gatctggccc gcgaatacga ccatggtgcc gcggccgcgg ctcgagggat cggccgccac
     5641 ccgcaccgaa tcggtaaggt ttcgtggccc gtcccaccct tcatcgctcg aggtgcgcat
     5701 cgctccggtg atcaccaccg gggtctcggc cgggagggtt cgcgacagca ggtaggccgt
     5761 ctcctcgatc gtatcggtgc catgggtgat gacgatcccc tgcggcggtt cacccgcatc
     5821 tccctgcatc accgcgcgga cccggttgcg cagttcccag agcttcgcag gccccatgtg
     5881 gcaggcaggg aaccgacccc agtcgtcgat ccggtagggg ctgatcgacc cgagctccgg
     5941 cgcgaaggcc accagcgtcg cgccgccgtg ggtaggaacg tttccgccgg cccgctcgtc
     6001 gcgggtcatg gagatcgtgc caccggtgaa gagcaggtga atcaccacgg ctccactacc
     6061 cgcatagcac cgagccaccg ttcacgtt
//
LOCUS       DATIFF010000084         3738 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2166177, whole genome shotgun sequence.
ACCESSION   DATIFF010000084 DATIFF010000000
VERSION     DATIFF010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3738
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2166177"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(172..855)
                     /locus_tag="VLD58_01285"
     CDS             complement(172..855)
                     /locus_tag="VLD58_01285"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HSB52951.1"
                     /translation="MTEPRRPSVIAHRGASGHAYENSPAAFRRAVALGADGVELDIHA
                     TADGALLVHHDPEVRGLGPISTLPRSAFLSYRLPNGEPIPTLAEALALCAGLAVWVEV
                     KTLPPDCDAVLLETLDAGPTPGRYAVHGFDHRIVERLGERRPGLQRGVLLASYLLDTL
                     TVLRTAGAHTLWMETHLIDQALVDLVHSAGGQIISWTANDDAEIRRLIRLGVDGICGN
                     YPDRITSAL"
     gene            complement(848..2047)
                     /locus_tag="VLD58_01290"
     CDS             complement(848..2047)
                     /locus_tag="VLD58_01290"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006635 - fatty acid beta-oxidation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HSB52952.1"
                     /translation="MSEVVITAAVRTPIARAAGALAEIRPDDLAAGAIRGLLERSGIP
                     GDRVEDVILGCSNQAGEDNRNVARMAALLAGLPVEVPGQTVNRLCGSGLQAVASASQA
                     IRAGEGEVFIAGGVESMTRAPYVMLKSGSAWNRTPPPMSDTTVGWRFVNPAMPKDWTI
                     SLGETAEKVARQYQISRREQDEFAVESQRRAQEALARGVFADELVPVSVPNGKGGQTT
                     FSTDEHPRAGVTVESLGKMKPAFLKDGTVTAGTSSGINDGSAALAVVSREAARGLGAR
                     PLARIVGSAVAGVDPSVMGLGPIPATRKLLARVGLSAKDLDLIELNEAFASQSIACVR
                     ELGLDSSKVNIYGGAIALGHPLGASGARILTTLVHALRRTGGRYGLATMCIGVGQGIA
                     MVVERLD"
     gene            2187..2741
                     /locus_tag="VLD58_01295"
     CDS             2187..2741
                     /locus_tag="VLD58_01295"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSB52953.1"
                     /translation="MTGPADTPPSAPADADLVRAFRGGDERAATVLVNRHAASLMRFL
                     SGAGADGGDLDDLVQETFIRAFRALDGWRGEAAFRSWLLSIGSNLLKDQFRKHRGRTM
                     VALEDTDIAAQDDPAASLDATEAERRLQEGLGQLPRLQREVFLLRAQQGMDYDEIART
                     LDTTAGSARVHYHHAVKRLKELVA"
     gene            2738..3280
                     /locus_tag="VLD58_01300"
     CDS             2738..3280
                     /locus_tag="VLD58_01300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52954.1"
                     /translation="MTLDICGTLTDRMPLVAHGAAEWSAAELAHLGSCADCTAEWNLV
                     RTTAGLGARAAARLDTPRLAAAVLGEVKQRKQRDRWRRGSWMAGLAAAAAIVLVVTLQ
                     GPPARPDLASEVDSGTGQAVVVGLHLPLAELESLDQGQLESVLEGLDAPVSEVDPGPA
                     PSFGDLNDSQLERVLRSLEG"
     gene            3283..>3738
                     /locus_tag="VLD58_01305"
     CDS             3283..>3738
                     /locus_tag="VLD58_01305"
                     /inference="COORDINATES: protein motif:HMM:NF019430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HSB52955.1"
                     /translation="MRKTTWLLLGLSLMGAAPLLAQGEGDDTGRAGTLRQMIEDRFTA
                     RVQEELGLTDQQSLKLRETVGTYFVKRRALEAEERRLRQALAGELRPGVAANKETVGR
                     LTDQLLDNKVRYVESYRSEIRDLSTFLDPVQRAQFLILRERLLDRVRQAQ"
BASE COUNT          576 a         1232 c         1357 g          573 t
ORIGIN      
        1 cctgggtgga atggtccggc gcgagcacca cgtcgagccc gttttccagg gtgaatcgct
       61 cgaaggcgat cttgcccgcg gcctgcccgt ggagcgggtg gctggggacc agggtcagga
      121 gtgacagggc ggaacaaaga aggcgggacc agcgtggcat gggaaccaga ttcatagcgc
      181 ggaagtgatc cgatcgggat agttgccgca gatgccgtcg acgcccaggc ggatgaggcg
      241 gcggatctcg gcgtcgtcat tcgcagtcca ggaaatgatc tggcctccgg cggaatgcac
      301 cagatcgacc agggcctggt cgatgagatg ggtttccatc cagagggtat gggcgcctgc
      361 ggtgcggagc accgtgagcg tgtcgagcag gtacgaggcg agcagcacgc cgcgctggag
      421 acccggccgc cgctccccca ggcgctccac aatgcggtga tcgaaaccgt gcaccgcgta
      481 gcgccctggc gtggggccgg catcgagggt ctcgagcagc accgcgtcac agtcgggtgg
      541 gagtgtcttc acctcgaccc atacggcgag cccggcgcag agtgccagcg cctcggccag
      601 cgtgggaatc ggctcaccgt tcgggaggcg gtagctgagg aacgccgagc ggggcagggt
      661 gctgatcggc ccgaggccac ggacttcggg gtcatggtgc accagcaggg cgccatccgc
      721 agtggcgtgg atgtcgagtt cgaccccatc cgcgcccagc gccaccgcgc gccggaaggc
      781 cgcgggggag ttctcgtagg catgcccgga agcgccgcga tgcgcgatga cgctgggccg
      841 gcggggctca gtcaagccgc tcgaccacca ttgcgatgcc ctggcccacc ccgatacaca
      901 tggtcgcgag tccgtaacgg ccgccggtac gccggagggc gtgtaccagc gtggtgagaa
      961 tgcgggcccc gcttgccccg agcggatggc ccagggcgat cgcgccgccg tagatgttca
     1021 ccttggacga atcgaggccg agttctcgca cgcaggcgat cgactgggaa gcaaaggcct
     1081 cgttgagctc gatgaggtcg aggtcctttg cgctgagccc caccctcgcc agcagcttcc
     1141 tggtcgccgg gatcgggccg agtcccatca ccgaggggtc caccccggca acggcgctcc
     1201 ccacgatgcg ggcgagtggt ctggcgccca gtcctctggc cgcctcccgg ctcacaaccg
     1261 cgagtgccgc cgacccgtcg ttgatgccgc tcgaggtccc ggccgtgacg gtgccgtcct
     1321 tgagaaacgc cggcttcatc ttgcccagcg attccaccgt cacaccggcg cgcgggtgct
     1381 catcggtgct gaatgtcgtc tggccaccct tgccgttggg tacgctgacc gggacgagct
     1441 cgtcggcgaa gaccccgcgc gccagcgcct cctgggcccg ccgctgactc tcgaccgcga
     1501 attcatcctg ctcccgccgc gaaatctggt attgccgggc caccttctct gcggtctcgc
     1561 cgagcgagat ggtccagtcc ttcggcatgg cgggattcac gaagcgccag cccacggtgg
     1621 tgtcggacat agggggcgga gtccggttcc aggcgctgcc gctcttgagc atcacgtagg
     1681 gcgcgcgggt catgctctcg accccgccgg caatgaagac ctccccctcg ccggcgcgga
     1741 tcgcctggct ggcgctcgcc acggcctgga ggcccgagcc acagagccgg ttgacggtct
     1801 gtccagggac ctcgaccggg agcccggcca ggagggccgc catccgggcc acgttccggt
     1861 tgtcctcccc ggcctgattg gagcagccca gtatcacgtc ctccaccctg tctccgggaa
     1921 tccccgagcg ttcgaggagg ccccggatgg cgccggcggc gaggtcatca gggcggattt
     1981 cggccagcgc gccggctgcc cgggcaatgg gggtgcgtac cgcggcggta atgacgactt
     2041 cggacacgga cttggtcttc gctgttgggg gaaatgaaga tagctgcccc gggagagcgg
     2101 ctgcttgcgg acccggcggg acccggccat cctccactgg gcagccaact taacaacttc
     2161 cgggtctacc cgtctccctc ctgtccatga ccgggccggc agacacccca ccttccgctc
     2221 cggcggatgc cgacctcgtc cgcgccttcc ggggcgggga cgagcgggcg gcgacggtgc
     2281 tggtgaaccg gcatgcggcg tccctgatgc ggtttctgag cggagccgga gccgacggtg
     2341 gcgatctgga cgacctggtc caggagacat tcattcgggc gttccgggcg ctcgatggct
     2401 ggcggggtga ggcggcattc cggagctggc tgctttcgat cggcagcaac ctgctcaagg
     2461 atcagttccg caagcaccgc ggccgcacca tggtggcgct ggaagacacc gacattgcgg
     2521 cgcaggacga ccccgcggct tcgctggatg cgaccgaagc ggagcggcgt ctgcaggaag
     2581 ggctgggcca gctgccgcgg ttgcagcgcg aggtcttcct gctccgggcg caacagggca
     2641 tggactacga cgagattgcc cggacgctgg acacgacggc tggatcggcg cgggtgcact
     2701 atcaccacgc ggtcaaacgg ctgaaggagc tggtggcatg acgctcgaca tctgtgggac
     2761 gctgaccgac cggatgccgc tggtggctca cggcgcggcc gagtggagtg ccgcggaact
     2821 ggcacacctc gggagctgcg ccgattgcac cgccgagtgg aacctggtcc gaacgacggc
     2881 tgggctgggt gcccgcgccg ccgctcggct ggatacgccc cgcctggcag cggcggtgct
     2941 gggcgaggtc aagcagagaa agcagcgtga ccgctggcgc cgggggtcgt ggatggcggg
     3001 actggcagcc gcagctgcca tcgtcctggt ggtcacgctg caaggtcctc ccgcaaggcc
     3061 ggacctcgcc agcgaggtcg attcggggac cgggcaggcg gtggtggtgg ggctgcacct
     3121 gccgctggcg gagctcgaat cgctcgacca gggccagctc gaatcggtgc tggagggcct
     3181 cgacgctccg gtgagtgagg tcgatcccgg tccggcgccc tcgttcggcg acctgaatga
     3241 ttcacaactg gagcgcgtgc tgcgctcgct ggagggctga gaatgcgcaa gacaacctgg
     3301 ctgctcctgg gcttgagcct gatgggcgcc gcgccccttc tggcgcaggg cgagggcgat
     3361 gacaccggcc gggcgggtac cctccgccag atgatcgagg accggttcac ggcccgggtg
     3421 caggaggagc tcggtctgac cgaccagcag tcgctcaagc tgcgggagac ggtggggacc
     3481 tacttcgtga agcggcgggc actcgaggcc gaggagcgcc ggctccggca ggcgctcgcg
     3541 ggcgaactcc gtccgggcgt ggcggccaac aaggagacgg tggggcgcct taccgaccag
     3601 ctgctcgaca acaaggtgcg ttacgtcgag tcgtaccgtt ccgagatccg ggacctctcc
     3661 accttcctcg atccggtgca gcgggcccag ttcctcattc tccgggagcg gctgctcgac
     3721 cgggtgcgcc aggcccag
//
LOCUS       DATIFF010000085         3304 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_473741, whole genome shotgun sequence.
ACCESSION   DATIFF010000085 DATIFF010000000
VERSION     DATIFF010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3304
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_473741"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..661
                     /locus_tag="VLD58_01310"
     CDS             <1..661
                     /locus_tag="VLD58_01310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52956.1"
                     /translation="GVYYPDVPEPATSTAPAENGTGAAEPATSDSAGIPASGGPSSSA
                     PAPPAGPRPSSANRSRAADTGVYYPDSPASGTAADAASNKEAAAVGVYHPDPPPVPPP
                     GARETRVAAGDSGTARTPNRGPVTAADTLLASACGDAPAGSEAPGLLAVLFRSRTAEE
                     VRHAAAKQVGGTIAGESNEGENYVRFPPDAGAPSAVADRLIRMGPVIRVSPVACPGPA
                     H"
     gene            721..873
                     /locus_tag="VLD58_01315"
     CDS             721..873
                     /locus_tag="VLD58_01315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52957.1"
                     /translation="MPLIPVLALLAFALAAGAYHLDQPVLAVLFALVGIGLFAPLIAD
                     YIRASF"
     gene            complement(875..1327)
                     /locus_tag="VLD58_01320"
     CDS             complement(875..1327)
                     /locus_tag="VLD58_01320"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB52958.1"
                     /translation="MTPPITAPSTTILVVDDERFARQVFYRMLSEEGYRVFEAGVAEE
                     AIAVLEQAHRYVSLVLLDVVMPVVDGVQLGRRILGRWPALRLLYMSAYPAEVLAQHGL
                     DNPAVPFLSKPFTRDELLAKIERALAPATPSWVPGRTPATQPAERPLT"
     gene            complement(1428..2324)
                     /locus_tag="VLD58_01325"
     CDS             complement(1428..2324)
                     /locus_tag="VLD58_01325"
                     /inference="COORDINATES: protein motif:HMM:NF025736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HSB52959.1"
                     /translation="MEDTRLLSPLAATHGPAAIVVGASMLGLLLVHRAGPMAGNWRPW
                     VLGPVLALTLGFAGRIWQRSGRVVAWARLWSVVVAFTITQAFLLTAVAWKVAIPSWRG
                     FVWDARLAAADMMLHGGVTPDHFLRWVPLTAMDRFYLGWFAVFALMTAWQAWELNGRY
                     FTAMAVLWTALGAGLGTLVASAGPCYLEFVTGSPLYHPLMAHLDGHGLTARQLQETLW
                     LAYRGRRTGIVAGISAFPSMHVAVPALYTLAIPRWRVLTVPFLLLTLVGSVALGWHYA
                     IDGYAAVLGAGLCWWLAAPLHP"
     gene            complement(2553..3224)
                     /locus_tag="VLD58_01330"
     CDS             complement(2553..3224)
                     /locus_tag="VLD58_01330"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HSB52960.1"
                     /translation="MHWLYLVFQFVASSPQPIQVVVLVFLGAWVALLVHELGHAVVAR
                     ACGLQVWSIRLGWRPTIWRSELGTCRVQIGLLPLHGEVRLHDRDAEALGYRAYRTTRW
                     RFEWRRGSWRAFAITMAGSLANLSVAAGVLGYWLWMPRLSPHPFAITSVVFVVNLLMY
                     LNLVPIPGLDGWRLALQAAAWRRYRLRANPGADGSRTEGRGAERSPAAPAVPPHRGPK
                     DSNQP"
BASE COUNT          581 a         1142 c         1154 g          427 t
ORIGIN      
        1 cggcgtgtac tatccggatg ttccggagcc ggcgacctcg accgcgccgg ctgagaacgg
       61 taccggagcc gcggagcccg ccacgagcga ttcggcgggc atcccggcct cgggaggccc
      121 atcgagctcg gccccggccc ccccggcggg gccgcggccc tcgtcggcga atcgcagccg
      181 ggccgccgat acgggcgtct actatcccga ctctccggcg tctggcacgg cggccgacgc
      241 cgcatcgaac aaggaggcgg ccgcggtggg cgtctaccac ccggatccgc cgccggtccc
      301 acccccgggt gcacgcgaga cgcgagtggc cgcgggcgat tccggcacgg ctcgcacacc
      361 caatcgcggc ccggtgacgg cagccgacac cctcctcgcc tcggcctgcg gcgacgcccc
      421 cgcgggaagc gaggcacccg gcctcctcgc ggtgctgttc cgctctcgca ccgccgagga
      481 ggtgcgtcat gcggccgcga agcaggtcgg cgggacgatc gcgggggaat ccaacgaggg
      541 ggagaattac gtgcgcttcc cgccggacgc gggtgcaccg tccgcggtgg cggatcgcct
      601 cattcgaatg ggtccggtca tccgggtctc gccggtggcc tgccccgggc cggcccactg
      661 agcgtccggc ctcgttcccg gctcgggaac gcccgaccgt actcatccca ggagagccac
      721 atgccgctca tcccggtact cgcgctcctc gcgttcgcgc tcgccgccgg ggcgtatcat
      781 ctcgaccagc cggtgctggc cgtgttgttc gcgctggtgg gcatcggact cttcgcgccg
      841 ctcatcgcgg actacatccg cgcgagcttc tgactcaggt gagcggccgc tccgcgggct
      901 gcgttgccgg cgtccgaccc ggcacccagc ttggcgtcgc gggggcgagt gcccgctcga
      961 tcttggccag cagctcgtca cgcgtaaacg gcttggacag gaacgggacc gccggattgt
     1021 cgagtccgtg ctgcgccagc acctccgccg ggtaggccga catgtagagc agccggagcg
     1081 ccggccagcg cccgagaatg cgccggccga gctgcacgcc atccaccacc ggcatcacga
     1141 cgtcgagcaa taccagcgac acgtagcggt gggcctgctc gagcaccgct atcgcttcct
     1201 ccgcaacgcc cgcctcgaag acgcggtaac cttcctcgct gagcatccgg tagaagacct
     1261 gacgggcgaa gcgttcgtcg tccacgacca ggatggtagt tgagggtgcc gtgatcggcg
     1321 gcgtcacaag ggctccggcg aaagagagaa cttgacccct gccgcaagat ggggtgccgt
     1381 cggccaggtg tctggaatct gcatcacgcc ggcggggcgg ccgtgcctca ggggtggagg
     1441 ggcgctgcga gccaccagca caggcccgcc ccgagcaccg cggcgtatcc gtcgatggcg
     1501 tagtgccagc ccagcgccac cgagcccacc aacgtcagga ggagaaaggg cacggtgagg
     1561 acccgccagc gcgggatggc gagcgtgtac agcgccggca cggccacatg catcgaggga
     1621 aacgcggaga tcccggccac gatcccggtc cgcctccccc ggtaggcgag ccagagggtc
     1681 tcctggagct gacgggcggt gagcccgtgc ccatcgaggt gggccatgag ggggtggtac
     1741 aacggggaac cggtcacgaa ttccagatag cagggccccg ccgaggccac cagggtcccg
     1801 agcccggcgc caagggcggt ccaaagaacg gccatggcag tgaaataccg gccgttcaac
     1861 tcccaggctt gccaggccgt catcagggcg aagacggcaa accaccccag gtagaaacga
     1921 tccatcgccg tcagtggaac ccatcgcaga aaatgatcgg gcgtgacgcc gccgtgcagc
     1981 atcatgtcgg ccgctgccaa gcgggcgtcc cacacgaacc cgcgccagga ggggatcgcc
     2041 actttccacg cgaccgccgt caggagaaag gcctgcgtga tcgtgaatgc gaccactacc
     2101 gaccagagtc gcgcccacgc cacaacgcgg ccgctccgct gccagatccg gccggcaaaa
     2161 cccagggtga gcgcgaggac cggccccagc acccagggtc gccagttccc ggccatcggg
     2221 ccggccctgt gcacgagcag gagtccgagc atcgaggccc cgacgacgat cgcagccggg
     2281 ccgtgagtgg ccgccagcgg cgagaggaga cgtgtgtcct ccacgcaggg ggaatcggtc
     2341 ggcggggcca tgagagcccc agcgtagcac gggcatgtga caccgagcgg ccggactgca
     2401 gcccccgggg cgggaaatgt ggagaaaagg agcgaacgcg aaggtgaatc gcggcgtggt
     2461 cacgccggag gcgggggcag cgagttcgtc aatcgaatgg ccggaccgga atcgacgata
     2521 cgggaactgt tatcggctga gggccggtcg cgtcacggtt gattggagtc cttggggccg
     2581 cggtgaggcg ggacggcggg cgccgcaggg cttcgctcgg cgccgcgacc ctccgttcgc
     2641 gacccatccg cgcctgggtt cgctctgagc cgataccgac gccaggcggc ggcctgcagc
     2701 gccaatcgcc agccgtccag accggggatg ggaacgaggt tcaagtacat gagcagattc
     2761 acaacgaata cgaccgacgt gatggcgaat gggtgcggac tgagcctcgg catccagagc
     2821 caatagccga gaacccctgc cgcgacggag agattggcga ggctgccagc catcgtgatg
     2881 gcgaacgccc gccaggaccc ccggcgccac tcgaatcgcc accttgtagt gcgatacgcc
     2941 cggtacccca gcgcttcagc gtcacggtcg tgaagccgaa cctcgccgtg cagcggaagg
     3001 aggccgatct gcacgcggca ggtgcccagc tccgatcgcc agatggtggg tctccagccc
     3061 agccggatgc tccacacctg caaaccgcaa gcgcgtgcca ccacggcgtg gccaagttcg
     3121 tggacgagaa gtgcaaccca tgctccgagg aacacgagca ccacgacctg gatgggctgc
     3181 ggggagctgg cgacgaactg gaagaccagg tagagccagt gcatgaacgc tgattccggt
     3241 gaatgcccgg gccgggactc gaacccggac ggggttgccc ccaggagatt ttaagtctcg
     3301 agcg
//
LOCUS       DATIFF010000086         3773 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1397190, whole genome shotgun sequence.
ACCESSION   DATIFF010000086 DATIFF010000000
VERSION     DATIFF010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3773
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1397190"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            3..455
                     /gene="rpsK"
                     /locus_tag="VLD58_01335"
     CDS             3..455
                     /gene="rpsK"
                     /locus_tag="VLD58_01335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HSB52961.1"
                     /translation="MTNPTPAQPETPAAAAPAPAAAAPAKASAKRGKKVVESEGIAHI
                     SATFNNLLITITDLKGNTLAWGSAGKAGFKGSKKSTPFAATVAAENCGREAMNLGLRR
                     VHVRVQGPGSGRESAIQALASVGLRVVSIRDVTPIPHNGCRPPKKRRV"
     gene            459..1094
                     /gene="rpsD"
                     /locus_tag="VLD58_01340"
     CDS             459..1094
                     /gene="rpsD"
                     /locus_tag="VLD58_01340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002614801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HSB52962.1"
                     /translation="MSRYVGPSCRLCRREGTKLFLKGTKCLTEKCPVERRAYPPGQHG
                     QNQGRQRKASEYSKQMREKQKVKRMYGLSESQFRNTFDAVTREPGVKGTNLLVALETR
                     LDNIVYRMGFAASRKAARQLIGHGHVEVNGHRVDIPSYRVEPGEEVRVAPGSRELVAV
                     KLAQESAARGAPVSWLSVDQDKAAGRLVERPTRDTIPINAQEQLIVELYSK"
     gene            1097..2152
                     /locus_tag="VLD58_01345"
     CDS             1097..2152
                     /locus_tag="VLD58_01345"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:NF003513.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HSB52963.1"
                     /translation="MTIDLTGLVRPHLVEMTKRDDNPNAAEFRLQPLERGFGYTLGNS
                     LRRLLLSSLRGSAVWGFRLDGVVHEHQTVPGVLEDVHQIIQRLKALTLVLAEDVDEAV
                     LHIKRDGGGPVYARDIQEHGSVRVVNPDHLLFTLQDDREIGGELYVNKGRGYVEAELH
                     PADRSLPVDLVRIDAIYNPVRRANFTVAETRVGQRTDYDRLTVTLETNGTITPEDAIA
                     YAAALAQEHFRYFVEFGKVPLARDTAGPAGVPAAGNLRQRLSKLIDDFGLSVRSLNSL
                     KNSNIRTLRDLVEFSEDDLLKVKNVGEKAIQEIADLLQREGLNFGMRFEDADGDLRIA
                     HPGTPPAPHPAPAGEGQ"
     gene            2154..2510
                     /gene="rplQ"
                     /locus_tag="VLD58_01350"
     CDS             2154..2510
                     /gene="rplQ"
                     /locus_tag="VLD58_01350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HSB52964.1"
                     /translation="MRHRAKGRQLSRTASHKRAMLNNMATSLFVHGRVVTTEAKAKEL
                     RPFAERLVTLARRGDLHARRLAGRKIKDRDALTKLFAEIGPRFAARPGGYTRILKLGH
                     RPGDGADVARIELLEA"
     gene            complement(2601..2792)
                     /gene="rpmB"
                     /locus_tag="VLD58_01355"
     CDS             complement(2601..2792)
                     /gene="rpmB"
                     /locus_tag="VLD58_01355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014398134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HSB52965.1"
                     /translation="MARVCAVCAKGPVTGHNVSHAKNRTNRRWYPNLQTVRVLVDGAP
                     RRVRVCGQCIKSNRITKAT"
     gene            2892..>3773
                     /locus_tag="VLD58_01360"
     CDS             2892..>3773
                     /locus_tag="VLD58_01360"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HSB52966.1"
                     /translation="MPTALITGITGQDGSYLAELLLAKGYRVFGVVRRTSHHSYERID
                     HLLDRVEIVPADLLDQHSLTVVLQETRPDEVYNLAAQSYVPTSWTQPVLTGEFTALGV
                     TRILEAIRLVHPAARFYQASSSEMFGKVQESPQRETTPFYPRSPYGVAKVYGHWITVN
                     YRESYGLYAVSGILFNHESPRRGIEFVTRKVTDGAARIKLGRARELHLGNLDAKRDWG
                     FAGDYVDAMWRMLQQPAPEDYVVGTGIAHSVRDLVEIAFGHVGLDYRDHVVSDPRYYR
                     PAEVDVLLADPAKARREL"
BASE COUNT          623 a         1297 c         1304 g          549 t
ORIGIN      
        1 agatgacgaa tccgacaccg gctcagcccg agacgcctgc cgccgcggcg cccgccccgg
       61 cggccgcggc gccggccaag gcgagcgcca agcggggcaa gaaggtggtc gagtccgagg
      121 gcatcgccca catctcggcc acgttcaaca acctcctgat cacgatcacc gacctcaagg
      181 gcaacacgct cgcgtggggc tcggcgggca aagccgggtt caagggctcg aagaagtcca
      241 cgccgttcgc cgccaccgtg gccgccgaga actgcggccg ggaggccatg aacctcgggc
      301 ttcggcgggt gcacgtccgg gtccagggcc cgggcagcgg ccgggaatcg gcgatccagg
      361 cgctcgcgtc cgtggggctc cgggtggtct ccatccgcga cgtcaccccg attccccaca
      421 acgggtgccg cccgcccaag aagcggcggg tctgagccat gtcacgttac gttggtccga
      481 gctgccgcct ctgccgccgc gagggcacca agctgttcct caagggcacc aagtgcctga
      541 ccgagaagtg ccccgtcgag cgccgggcgt acccgcccgg ccagcacggc cagaaccagg
      601 ggcgccagcg gaaggcgtct gaatactcca agcagatgcg cgagaagcag aaggtgaagc
      661 ggatgtacgg gctctcggag agccaatttc gcaacacctt cgacgcggtg acgcgcgagc
      721 cgggcgtcaa gggcaccaac ctgctggtgg ccctcgagac gcggctcgac aatatcgtgt
      781 accggatggg cttcgcggca agccggaagg ccgcccgcca gctcatcggc cacggccacg
      841 tcgaggtgaa cggccaccgg gtggacatcc cctcctaccg ggtcgagccc ggcgaggaag
      901 tgcgggtggc gcccgggagc cgcgagctcg tggccgtgaa gctggcgcag gagagtgcgg
      961 cgcggggcgc gccggtctcc tggctgtcgg tggaccagga caaggccgcc ggccggctgg
     1021 tcgagcggcc gacgcgcgac accatcccga tcaacgccca ggagcagctc atcgtggagc
     1081 tgtactcgaa gtgaccatga ccatcgatct caccggactc gtgcgtcccc acctcgtcga
     1141 gatgacgaag cgggacgaca acccgaacgc cgcggagttc cggctccagc cgctcgagcg
     1201 cggcttcggc tacacgctgg gcaactcgct ccggcggctg ctgctctcgt ccctccgggg
     1261 cagcgcggtc tggggcttcc gcctcgacgg cgtcgtgcac gagcatcaga ccgtgccggg
     1321 cgtgctggag gacgtgcacc agatcatcca gcggctcaag gccctgacgc tggtgctcgc
     1381 ggaggacgtg gacgaggcag tgctccacat caagcgcgac ggtggcgggc cggtgtacgc
     1441 ccgcgacatc caggagcacg ggtcggtccg cgtggtgaac ccggaccacc tgctgttcac
     1501 gctccaggac gatcgcgaga tcggcgggga gctgtacgtc aacaaggggc gggggtatgt
     1561 cgaagccgag ctgcatccgg cggaccgctc cttgccggtg gacctcgtgc gcatcgacgc
     1621 gatctacaat ccggtgcgcc gggccaattt caccgtggcg gaaacccgcg tgggccagcg
     1681 gaccgactac gaccggttga ccgtgacgct cgagaccaac ggcaccatca cgccggagga
     1741 cgcgatcgca tacgcagccg cgctggcgca ggagcacttc cgctacttcg ttgagttcgg
     1801 caaggtgccg ctggcgcggg atacggcagg gccggcgggc gtccccgccg cgggcaatct
     1861 gcgccagcgc ctcagcaagc tgatcgacga cttcggcctg tcggtgcggt cgctcaattc
     1921 gctcaagaac tcgaacatcc ggacgctccg cgacctggtc gagttcagcg aggacgatct
     1981 gctcaaggtc aagaacgtcg gcgagaaggc catccaggag atcgccgacc tgctccagcg
     2041 cgaagggctg aacttcggga tgcgcttcga ggacgccgac ggcgacctgc ggatcgcgca
     2101 ccctggcact cctccggcgc cgcacccggc gccggcgggc gaggggcagt gagatgcggc
     2161 atcgcgccaa gggtcgccag ctctcccgca cggccagcca caagcgggcc atgctgaaca
     2221 acatggcgac cagtctcttc gtccacggcc gggtggtgac caccgaggcc aaggcgaagg
     2281 agctccggcc gttcgccgag cggctcgtca cgctggcgcg ccggggcgat ctccacgcgc
     2341 ggcggctcgc cggtcggaag atcaaggacc gcgacgcgct gaccaagctc ttcgcggaga
     2401 tcgggccgcg cttcgccgcc cggcccggcg ggtacacccg gatcctcaag ctggggcacc
     2461 ggcccggtga cggagccgat gtcgcccgca tcgagctgct ggaagcgtga gccggccgct
     2521 ttccgaaacg acgaagggga ccctcgggtc cccttttttt cagcccagac ctcacggcgc
     2581 cccgcgcgcg ggcgccgggc tcaggtggcc ttggtgatcc gattactctt gatgcactgc
     2641 ccgcagacgc gcacccgccg cggggcgccg tccaccagga cccggacggt ctggagattc
     2701 ggataccacc ggcggttggt ccggttcttg gcgtggctta cgttgtggcc ggttaccggc
     2761 cccttggcgc agacggcgca aacccgtgcc atcgagttgt cctcatcagg tagcgttgcc
     2821 cggctaggcc ggagaaccgg gaaaactatt cgtatgcctt atcttgtgca accctggcgg
     2881 ggtctggctc cgtgcccact gcgctgatca ccgggatcac cggtcaggac gggtcgtacc
     2941 tcgccgagct gctgttggcg aagggctacc gggtcttcgg cgtggtgcgc cgcaccagcc
     3001 atcacagcta cgagcggatc gaccatctgc tcgaccgggt cgagatcgtc ccggccgatc
     3061 tgctcgacca gcattcgctc accgtcgtgc tgcaggagac tcggccggac gaggtctaca
     3121 acctcgccgc ccagagctac gtgccgacgt catggaccca gcccgtgctc accggcgagt
     3181 ttacggcgct cggcgtcacc cggatcctcg aggccatccg gctggtgcac ccggcggccc
     3241 ggttctatca ggcaagctcg tccgagatgt tcgggaaagt gcaggagtcg ccccagcggg
     3301 agacgacgcc gttctacccc cggtcgccgt acggggtggc gaaagtgtac ggtcactgga
     3361 tcacggtcaa ctatcgcgag tcgtacgggc tgtacgccgt gagcggcatc ctgttcaatc
     3421 acgagtcgcc ccggcgcgga atcgagttcg tcacccggaa ggtcacggac ggggctgccc
     3481 gcatcaagct ggggcgcgcc cgggagctgc acctggggaa cctcgacgcc aagcgcgatt
     3541 ggggtttcgc gggcgactac gtggatgcga tgtggcggat gctgcagcag ccggcgcccg
     3601 aggactacgt cgtggggacg ggcatcgccc acagcgtccg cgacctggtc gagatcgcgt
     3661 tcggccacgt ggggctcgac taccgtgatc atgtagtctc cgacccgcgc tactatcggc
     3721 cggccgaagt ggatgtcctc ctggccgatc ccgccaaggc ccggcgcgag ctc
//
LOCUS       DATIFF010000087         1338 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1551055, whole genome shotgun sequence.
ACCESSION   DATIFF010000087 DATIFF010000000
VERSION     DATIFF010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1338
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1551055"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..726
                     /locus_tag="VLD58_01365"
     CDS             <1..726
                     /locus_tag="VLD58_01365"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSB52967.1"
                     /translation="VTGFAGPFLPTDPNAGPFALRLMVVNVVLLVFNLIPAFPMDGGR
                     VLRSLLATKLGLVRATRAAAAVGQTLAVVMGLVGLSPYGSPLLVLIAFFVFIGAAAEA
                     SAVETRAAAQGLTVAQVMVTQFRTIPVHATLSDAVDLLLSGEQREFPVVDNLGRTEGL
                     LTRENLIRGLKERGPGSTVAEAMTSPTPFVPPTAPFQEALDRLRASGLPALLVVDGAG
                     ALVGLLTLENISELLLIRRAAAR"
     gene            787..>1338
                     /locus_tag="VLD58_01370"
     CDS             787..>1338
                     /locus_tag="VLD58_01370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52968.1"
                     /translation="MSHPFRPSTALLTALTALSAACSGQEAARSDPKPPAGPGVVTIT
                     ATEYAFQLPAQVPAGPTTFELKSEGKELHHAVVVRLEEGKSVQDLAAALKNPGPPPPW
                     LHFEGGPNPPNPGGESNATLDLKPGHYAVLCFIPSSDGVPHFAKGMMTPFEVTAASSA
                     SASTMPDAEVVVRMTEYGYSLSTP"
BASE COUNT          189 a          490 c          444 g          215 t
ORIGIN      
        1 gtcaccggct tcgccggccc attcctgccc accgacccga acgccgggcc gttcgccctg
       61 cggctcatgg tggtgaacgt ggtgctgctg gtgttcaacc tcattccggc gttccccatg
      121 gacgggggcc gggtgctgcg ctcgctcctg gccaccaagc tcgggctggt ccgcgccacg
      181 cgcgccgccg cggccgtggg ccagacactg gcggtggtaa tggggctcgt gggactatcg
      241 ccctatggat ctccgctcct ggtgctgatc gccttcttcg tcttcatcgg cgccgccgcg
      301 gaagcctcgg ccgtggagac ccgcgcggcc gcccagggac tcacggtggc gcaggtgatg
      361 gtgacccagt tccggacgat cccagtgcac gctacgctgt ccgacgccgt ggacctcctg
      421 ctctcgggcg agcagcgcga gtttccggtg gtggacaacc tgggacggac ggagggactc
      481 ctcacccggg agaacctgat ccgcggcctc aaggagcggg gacccggatc gaccgtcgcc
      541 gaggcgatga cgtcgccgac gccgttcgtc cctccaacgg cgccgttcca ggaggccctg
      601 gaccggctcc gcgcaagcgg cctgccggcg ctcctagtcg tggacggcgc cggcgccctg
      661 gtcggccttc tgacgctcga gaacatctcg gagctgctgt tgattagacg ggccgccgct
      721 cgctagtatc ccctgcccga cagacccccg ctggcgggcg accttcactc ctggagccag
      781 taccgcatga gccatccgtt ccgccccagc accgccctgc tcaccgctct cacggcgctc
      841 agcgccgcct gctccggcca ggaggctgcc cggagcgatc ccaagcctcc ggcgggaccc
      901 ggcgtcgtga ccatcaccgc caccgaatat gccttccagc tgccggcgca ggtgccggcc
      961 ggaccgacga cgttcgagct gaagtccgag ggcaaggagc tccaccatgc agtggtggtg
     1021 cgactggagg aggggaagtc ggtgcaggac ctggccgcgg ccctcaagaa ccccgggccc
     1081 ccgccgccct ggctccactt cgagggcggg ccgaacccgc ccaatcctgg cggggaatcg
     1141 aacgcgacgc tcgacctcaa gcccggccat tacgcggtgc tctgcttcat cccgagcagc
     1201 gacggagtgc cccatttcgc caaggggatg atgactccgt tcgaggtgac cgccgcttcg
     1261 tcggcttccg cgagcacgat gccggatgcg gaggtcgtcg tgcggatgac ggagtatggt
     1321 tactccctct cgacacct
//
LOCUS       DATIFF010000088         1766 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1243893, whole genome shotgun sequence.
ACCESSION   DATIFF010000088 DATIFF010000000
VERSION     DATIFF010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1766
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1243893"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..884
                     /locus_tag="VLD58_01375"
     CDS             <1..884
                     /locus_tag="VLD58_01375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52969.1"
                     /translation="AFAHPTWYPRPSAAIPLWAMGLAAGAVAAWFAFRARRAHNPEPP
                     EPTTRTLLLAGMFAAMALIANAAYAGLQMAEIHYRTHILSRTWASLAIAVLTGWAVQR
                     WPRFRAGFLLVPVLFVGLGVWGGLERQDLWVSTWRLHQRELLSIVTSVPALTPGTGII
                     LRSGPTPNLYLATEADYLAQSWLVLLYDDPAIHALRLAPDRGTGCRATPEGLDCWHEH
                     EAECFAAGACAADRFPYDKLVILDFDDRQGTWWLVADPQGDPLLGGSAAAQAGYRPAG
                     RILKRPLTPRQRALLLQ"
     gene            899..1624
                     /locus_tag="VLD58_01380"
     CDS             899..1624
                     /locus_tag="VLD58_01380"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSB52970.1"
                     /translation="MSPDLSVVVLCYRSGGAARSCAARIGQVLLDAGIDDYQLVLVGN
                     YVPGSGDTTPDVVRELAAGDPRIVCSAVEKQGMMGWDMRSGLALATGEHLAVIDGDGQ
                     VLVEDLVRIYRLLREQGLDLAKTYRTRRGDGLKRKLFSLVFNGLFHVLFPGLAVRDVN
                     AKPKILTRSAYQRLNLRSDDWFIDAEILIQARRLGFRIGEIETEFLGLTGRRSFVTMA
                     AAVEFLRNLVRHRLRELRRRATK"
BASE COUNT          236 a          613 c          605 g          312 t
ORIGIN      
        1 gggccttcgc acacccaacc tggtatccca ggccgtcggc ggcgattccc ctgtgggcga
       61 tggggctcgc ggccggagca gtggcggcgt ggttcgcgtt ccgggcacgc cgggcccaca
      121 atccggagcc gccggagccc accacccgga cactcctctt ggccggaatg ttcgccgcga
      181 tggccttgat tgcgaatgcc gcgtatgccg ggcttcagat ggccgaaatt cactatcgca
      241 cgcacatcct gtcgcgtacc tgggcttctc tcgccatcgc cgttctgacc ggctgggcgg
      301 tgcaaagatg gccgcgcttc cgggccggtt ttctgctcgt gccggtcctt ttcgtggggc
      361 tcggcgtctg gggaggcctg gagcgtcagg acctgtgggt ttcgacctgg cggctgcacc
      421 agagagagct cctgtcgatc gtcaccagcg tccccgcgct gacacccggc accgggatca
      481 tcctgcgcag cgggccgacg ccgaatctgt atctcgcgac cgaggccgac tatctggcac
      541 agagctggct cgtcttgctc tatgatgacc ccgccattca cgccctgcgc ctggccccag
      601 accgcgggac gggctgccgt gccacacccg aggggctcga ctgctggcac gagcatgagg
      661 ccgaatgctt cgcggcgggc gcctgtgcgg ccgaccgctt tccctatgac aagctggtga
      721 tcctggactt cgacgatcgg caagggacct ggtggttggt tgccgatccg cagggtgacc
      781 ctctgttggg cggctccgcc gcggcgcagg ccggctatcg gcccgctggc cggatcctga
      841 agcgcccgct gacgccgcgg cagcgcgccc tgttgctcca gtagatcgtg gaaagcccat
      901 gagcccggat ctctccgtcg tcgtcctgtg ctaccgctcc ggaggcgcgg cgcgctcctg
      961 tgcggcccgc atcggtcagg tgctcctcga tgcgggcatc gacgactatc agctcgtgct
     1021 ggtcggcaat tatgtccccg gcagcggcga cacgaccccg gacgtcgtgc gggagctggc
     1081 ggccggcgac ccgcgcatcg tgtgctcggc ggtggagaaa cagggaatga tgggttggga
     1141 catgcgcagc ggattggccc tcgccaccgg ggagcacctg gcggtcatcg acggcgacgg
     1201 ccaggtgctg gtcgaggatc tggtgcggat ctaccggctg ctccgcgagc aggggctcga
     1261 cctggcgaag acgtaccgca cgcgccgcgg cgacggtctc aagcgcaagc ttttttcact
     1321 ggtcttcaac gggctctttc acgttctctt ccccgggctt gcggtgcggg acgtcaatgc
     1381 caagccgaag atcctgaccc gctcggccta ccagcggctg aatctgcgct ccgacgactg
     1441 gttcatcgac gcggagatcc tgatccaggc ccgccggctg ggatttcgca tcggcgagat
     1501 cgagacggag ttcctcggcc tgaccggccg gcgctccttc gtcacgatgg cggcggccgt
     1561 cgagttcctg cgcaatctcg tgcgccaccg gctccgggag ctccggcgga gggccacgaa
     1621 atgagggtcc tggtgaccgg ccccgggcgc ctcggccgtc cgctgctggc ggagctgcac
     1681 cggcggggcg tcaccggcgc cgtcctgcat cgcagccccg ccgactccct gtcgcccggc
     1741 tggcggtcca tccgcgccga cgtgac
//
LOCUS       DATIFF010000089         2322 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_320767, whole genome shotgun sequence.
ACCESSION   DATIFF010000089 DATIFF010000000
VERSION     DATIFF010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2322
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_320767"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            158..961
                     /locus_tag="VLD58_01385"
     CDS             158..961
                     /locus_tag="VLD58_01385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52971.1"
                     /translation="MPYLVGTAVALALFLAWLIARRRALHPSIRALLYPLASGPQRVA
                     CCLRGMFVPGNELFSRAPADPRQPTEGLTVHKWVKVPEVYHALDVLALGELQQLLLSS
                     NRRLSVRVVSGEPNRQAWSEPTIAVGPHYKATQILELCEPRLVAVRQPAAFRILNGTE
                     VFEAREGLDFGLVYKGRHTATHHMHWVVLGLGDSGTAAAAHFLRVHARSLGALTGRAP
                     FAAVISVDPNKGWESSVLRSLQPRPAWWRRFLHRKVWQKLTTTPWTVAV"
     gene            complement(965..1561)
                     /locus_tag="VLD58_01390"
     CDS             complement(965..1561)
                     /locus_tag="VLD58_01390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52972.1"
                     /translation="MNRGWLLLIVGVLPGSLAAQRPLLDLSAGRTGQAWRVSASAGWT
                     AAIGPLTIGGGPRLTRYGGDAARYRTHDAPPSGLASRVRLAPGVWSLNLFVLGDLRLV
                     GPVGAGANIDLAGVAAGKARRIGSTSIEPARWSLFRYGDNDRGSLNSEFYLRIRAANQ
                     MTIRAGASHYVTGYRVSGSSVRYLRFDTVPFVAIRWQP"
     gene            1710..2210
                     /locus_tag="VLD58_01395"
     CDS             1710..2210
                     /locus_tag="VLD58_01395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52973.1"
                     /translation="MARLRFLPFTALLVACQQGQLAQSCPTPVTSPSGMLVTQVLLRM
                     GEPGGPQYSVSLTASGDALYVGAPTLPVPGAYMGRLNGSAFQRIANDLMARGLPGDSA
                     GMAHLSCAPEPEISVALQTADGRYSGTAFCGHSAEETRFAAPIYSAIEQIRWYPGARV
                     ITLKPN"
BASE COUNT          349 a          862 c          740 g          371 t
ORIGIN      
        1 aggtcccgta gcggcccccg agcaccgcga taggacctgc atcactgaag caccgcgaca
       61 ggctgacgga cttgtcgctc gccgcactgc ccggcacctt tcgcctatgc cgcttccagc
      121 gctcgatccg tccctgcccg cgtgggacga tcttcccgtg ccatacctcg tcggcaccgc
      181 ggtggccctg gccctcttcc tggcctggct catcgcccgg cgccgcgccc tccatccgtc
      241 catacgcgcc ctgctctatc cgctggcgtc cggcccccag cgggtcgcct gctgtctccg
      301 cggcatgttc gtcccgggga acgagctctt ctcccgcgcc cccgccgatc cgcggcagcc
      361 caccgagggg ctcacggtcc acaagtgggt gaaggtgccc gaggtgtacc acgcgctgga
      421 tgtgctggcg ctgggagagt tgcagcagct cctgctcagc agcaatcgcc ggctgtcggt
      481 ccgggtcgtg tcgggtgaac ccaaccggca ggcgtggagc gagccgacca tcgccgtggg
      541 cccccattac aaggcgaccc agatactcga gctctgcgag ccgcggctgg tcgcggtgcg
      601 ccagccggcc gccttccgca tcctgaacgg gaccgaggtc ttcgaggcgc gggaagggct
      661 cgacttcggg ctggtctaca aaggccgcca caccgccacg caccacatgc actgggtcgt
      721 gctcggcctg ggtgacagcg gtaccgcggc cgcggcccat ttcctccggg tgcacgcccg
      781 cagtctcggc gctctcaccg gaagagcgcc cttcgccgcg gtcatctcgg tggatcccaa
      841 caaggggtgg gagagcagcg tgctccgctc gctccagccg cgcccggcat ggtggcggcg
      901 gttcctgcac cgcaaagtct ggcagaagct caccaccacg ccttggacgg tggcagtctg
      961 agcctcaagg ttgccagcga atggccacga agggcaccgt gtcgaagcgg agatatcgga
     1021 ccgagctccc actgactcgg taccccgtca cgtagtggct cgcgcctgca cggatggtca
     1081 tctggttcgc cgcacgaatc cgcagataga actcggaatt gagggaacca cggtcgttgt
     1141 cgccgtagcg gaagagggac caccgcgccg gctcgatcga cgtgctccct atccgccggg
     1201 cctttcccgc tgccacacct gccaggtcga tgttggcccc ggcgccgacc ggtcccacca
     1261 gccggaggtc tcccagcacg aagagattga gcgaccagac tccgggcgcg agccggaccc
     1321 gcgaggcgag ccccgagggc ggcgcgtcat gagtccgata gcgtgcagcg tctccgccat
     1381 agcgggtgag gcgcggtcct ccgccaattg tcagggggcc gatggcggca gtccacccgg
     1441 ccgaggcact gacccgccac gcctgcccgg tgcgcccggc cgagaggtcg agcaaaggcc
     1501 gctgggcggc aagcgacccc gggaggacac caacgatcag cagcagccag ccacgattca
     1561 tggagcaccg ttcaggtcgt agacccttcc cgaacgccgg acactccatt ttggttctct
     1621 ggcaactggc cggtccggcg ccgtgatgta ccttcgaagg gtaccccggc cccgtccgct
     1681 tccgtcacgc ccgcctggag ggcgatccca tggctcgact ccggttcctg ccgttcaccg
     1741 ctctgctggt cgcttgtcag cagggccagc tggcacaatc ctgccccact ccagttacct
     1801 caccctcggg gatgctggtg acccaggtgc tgcttcgcat gggcgaacct ggcggacccc
     1861 agtattctgt gagcctgacc gcgagcggag acgcgctcta cgtcggcgcc cccaccctgc
     1921 cggtgccggg ggcgtatatg ggccggctca acgggtcggc cttccagcgc atcgcaaatg
     1981 acctgatggc ccgggggctc cccggcgaca gcgccggcat ggcccacctt tcctgcgccc
     2041 cggagcccga gatctcggtc gcgctgcaga ccgccgatgg gcgctacagc ggcacggcct
     2101 tctgcggcca ctccgccgaa gagacccggt tcgccgcccc gatctactcc gccatcgaac
     2161 agatccgctg gtaccccggc gcccgggtca tcaccctgaa gccgaactga cgctttcgtg
     2221 agcgtgtatc acctggcgca ggtgaacatc gcacggttgc tggcgccgct cgattctccc
     2281 cagctcgccg gcttcgtggc ccgtctcgcc gagatcaacg cc
//
LOCUS       DATIFF010000090         2917 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_628307, whole genome shotgun sequence.
ACCESSION   DATIFF010000090 DATIFF010000000
VERSION     DATIFF010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2917
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_628307"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2490
                     /locus_tag="VLD58_01400"
     CDS             <1..2490
                     /locus_tag="VLD58_01400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52974.1"
                     /translation="GVTDYLKRRVSLPFRGNFAEFRHTIRHEMVHVFQLDLLIDNYLQ
                     SPRHARFNFPLWWSEGLAELWSGGQDARDEMVLRDLTLTGRLPTVRSLTFVLGGIVYP
                     LGGQLHRWLADTYGDWRVALMYKEQNRYETFEAALLAVYGRSIDQLGDEFQLAMRRKY
                     YPSVDSLAPLSILGREVARLAVKPAYIADSGGGGEVAYLSPATGYIAIYRRALDSART
                     HRVLTGGRSAEFEAFHPFDSRMDASRPGLLLFTARYGERDALVVWDLERSRVRGRYRF
                     PQLVSLLSPQWMPDGQSIVLSGLSESGVSDLYRVRLPDGTLERLTDDRYQDLDPVPSP
                     DGRWLAFASDRTADGKDGAANIFLLRLGQPGFRQLTAGNWKDESPIWGPDGRVYFTSD
                     RDGVLNAFSVDTLGNGRRETSSWSGAFDAVPLPDSSGLLVGGFHDLSWNVYRYPVDSV
                     ARLEQFAIGETRPAGHWDWVTPGDTAGSVLARKEPYRTKLTLDFAAGDAVVIPGYGGA
                     QGAVFVLSDLLNDNQVFASIGSFQGRRLGSIVDNINASAVYINRARRINWGLGAFRTK
                     GRNFEGDRIVAYDETAYGALGLLRYPVSRFSRFEGTVVAEHSDRIDFTLPVDQPRRVG
                     WIASHFLSYVHDNSLYLASGPIDGGRFSVTTGVSSDFTNSRFDSYLATADWRHYARLG
                     RRSTWALRAYGYYSGGDRPRRTNIGGTLAMRGYPQFGFIVGSRAYMFNQELRFPLLTH
                     LTLGTPLGDITFPEIQAALFTDVGKATFQSTDRALLGSYGISFRMALGPLAVVRMDLG
                     RRFSNGDYRGYSLDRDQRKPGFLTVFFGPNF"
     gene            2490..>2917
                     /locus_tag="VLD58_01405"
     CDS             2490..>2917
                     /locus_tag="VLD58_01405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52975.1"
                     /translation="MVQRLLFDRAAGLGYLVLVLAGCGGAPGKVVPASAQPLSPAQVA
                     EWVAGTVPSDHRLHRFKWLFRDEKSSAGGRGSARIAPPDSMRFDVAGPFGSGASSAAV
                     VGDQPLWTQPPDAIRKLVPNFPLMWAMFGVARMPMDGAEIR"
BASE COUNT          410 a         1030 c          985 g          492 t
ORIGIN      
        1 ggcgtcaccg actacctgaa gcggagggtg tcgcttccct tccggggcaa tttcgccgag
       61 ttccgccaca ccatccggca cgagatggtg catgtcttcc agctcgacct cctcatcgac
      121 aactatctcc agtcgccccg ccacgcccgg ttcaacttcc cgctctggtg gtccgagggg
      181 ctggcggagc tttggtccgg cgggcaggac gcccgcgacg agatggtgct gcgggacctc
      241 acgctgaccg ggcggctgcc gaccgtccgc tcgctcacct tcgtcctggg ggggatcgtg
      301 tatcccctcg gcgggcagct ccaccggtgg ctcgccgaca cctacggcga ctggcgggtg
      361 gcgttgatgt acaaggagca gaaccgctat gagacgttcg aggccgcgct cctggcggtc
      421 tacgggcgga gcatcgacca gctgggcgac gagttccagc tcgccatgcg gcggaagtat
      481 tacccgtcgg tggacagcct ggcccccttg tccatcctcg ggcgcgaagt ggcgcgtctc
      541 gcggtcaagc ccgcctacat cgccgacagc ggcgggggcg gggaagtggc ctacctgagc
      601 ccggccaccg ggtacatcgc catctaccgg cgcgccctcg acagcgcccg cacccaccgg
      661 gtgctcaccg gtgggcggtc ggccgagttc gaggcgtttc atcccttcga ttcccgcatg
      721 gacgccagcc ggcccggcct gctgctgttc accgcccggt atggggagcg cgatgcgctg
      781 gtggtctggg acctggagcg gagccgggtc cgcggccggt accgcttccc ccagctggtc
      841 tcgctcctgt cgccccagtg gatgccagac gggcagagca tcgtgctgag cgggctgtcc
      901 gagagcggcg tgtcggacct ctaccgcgtc cggctcccgg acggcacgct ggagcggctc
      961 accgacgatc gctaccagga cctggatccc gtccccagtc cggacgggcg ctggctggcg
     1021 ttcgcctccg accgcaccgc cgacggcaag gacggcgccg ccaacatctt cctgctgcgc
     1081 ctcgggcaac ccggatttcg ccagctcacc gccggcaact ggaaggacga gtccccgatc
     1141 tgggggcccg acggccgggt ctacttcacc tccgaccggg acggcgtcct caatgcgttc
     1201 tcggtggata ccctggggaa tggccggcgg gagacctcgt cctggagcgg cgccttcgac
     1261 gcggtaccgc tgccggatag ctccgggctc ctggtcgggg gctttcacga tctcagctgg
     1321 aacgtgtacc ggtatccggt ggacagcgtg gcccggctgg agcagttcgc catcggcgag
     1381 acccggccgg ccggccactg ggattgggtg accccgggcg acactgccgg cagcgtgctc
     1441 gcccgcaagg agccgtaccg caccaagctc accctcgact tcgccgccgg cgatgcggtg
     1501 gtgattccgg gctacggcgg cgcccagggc gcggtcttcg tgctcagcga cctgctgaac
     1561 gacaatcagg tcttcgcctc gatcggctcc ttccagggcc gccgcctggg cagcatcgtg
     1621 gacaacatca acgccagcgc ggtgtacatc aaccgggctc gccggatcaa ctggggattg
     1681 ggcgccttcc ggaccaaggg ccgcaatttc gagggcgacc gcatcgtcgc ttacgacgag
     1741 accgcctacg gcgcgctggg cctgctgcgc tatcccgtga gccggttcag ccggttcgag
     1801 ggcaccgtgg tggcggaaca ttccgatcga atcgacttca ctctgccggt ggaccagccg
     1861 cgccgggtcg ggtggatcgc ctcccacttt ctgagctacg tccacgacaa ctcgctctac
     1921 ctcgccagtg gcccgatcga cggcggccgg ttcagcgtca ccaccggtgt gtcgagcgac
     1981 ttcaccaaca gccgcttcga cagctacctc gcgaccgcgg actggcgcca ctacgcccgg
     2041 ctcggccgcc gcagcacctg ggcgcttcgg gcctatggct actacagcgg cggtgatcgt
     2101 ccccggcgca ccaacatcgg gggaacgctg gcgatgcggg gctaccccca gttcgggttc
     2161 atcgtcggct cccgggccta catgttcaac caggagctcc gcttccccct gctcacccat
     2221 ctgacgctgg gcacacccct gggggatatc acttttccgg agatccaggc ggcgctcttc
     2281 accgacgtgg gcaaggccac ctttcagtcc accgaccgag ccctcctggg gagctacggc
     2341 attagcttcc ggatggcgct cgggccgctg gccgtggtca ggatggatct cgggcgccgc
     2401 ttcagtaacg gcgactatcg gggctacagc ctcgaccggg accagcgcaa acccgggttc
     2461 ctgaccgtct tcttcgggcc taacttctga tggtgcaacg ccttttgttt gaccgggccg
     2521 ccgggctcgg atatcttgtc ctggtgctcg ccggttgcgg cggggcgccg gggaaggtgg
     2581 tgcccgcctc ggctcagccg ctgagtccgg cgcaggtggc cgaatgggtg gcgggcacgg
     2641 tgccgagcga tcaccggctg catcgcttca agtggctctt ccgagacgag aaatccagcg
     2701 ccggcgggcg aggcagcgcg cggatcgccc cgcccgactc gatgcgcttc gacgtggccg
     2761 gaccgttcgg ctcgggcgcg tcctccgcgg cggtcgtggg cgaccagccg ctctggaccc
     2821 agccgcccga cgcgatccgg aagctggtgc cgaactttcc gctgatgtgg gcgatgttcg
     2881 gcgtggcccg gatgccgatg gacggcgccg agatccg
//
LOCUS       DATIFF010000091         1323 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_475461, whole genome shotgun sequence.
ACCESSION   DATIFF010000091 DATIFF010000000
VERSION     DATIFF010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_475461"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..549)
                     /locus_tag="VLD58_01410"
     CDS             complement(<1..549)
                     /locus_tag="VLD58_01410"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HSB52976.1"
                     /translation="MPAKPRSSRAALVAAAVAMTLLAVILYANLVSPDQEIERPLPHR
                     YDTLDPQFRRTMSHLLGPAVVGGNQVTALLNGDEAFPAMLEAIRSARQSVNLESYIFW
                     SGEAPNAFAEALSERARAGVAVHLLVDWMGSKKIDDSLVTSMRKAGVQVEMYRPLRWY
                     QLDRLNHRTHRKLLVVDGRIGFT"
     gene            704..931
                     /locus_tag="VLD58_01415"
     CDS             704..931
                     /locus_tag="VLD58_01415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52977.1"
                     /translation="MEYADWYPGISPGKWHDATWVREVVLAQQRRGSPRWVIDGRILN
                     DLHFEFQGASPRSPHRPERMVGADISRLPAG"
     gene            1088..>1323
                     /locus_tag="VLD58_01420"
     CDS             1088..>1323
                     /locus_tag="VLD58_01420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52978.1"
                     /translation="MESRRYLRCLGQPALFGPAGEPIRFRTKKHLALLVYLAVEGRRS
                     HRRDRLAELFWPKVPLAEARHSLATALSVLRARLG"
BASE COUNT          200 a          441 c          474 g          208 t
ORIGIN      
        1 ggtgaacccg atccgcccgt ccactaccag cagcttccgg tgagtccggt ggttgagccg
       61 gtcgagctga taccagcgca gcgggcggta catctccacc tgtacccccg cctttcgcat
      121 gctcgtcacc agactgtcgt cgatcttctt ggaccccatc cagtccacca gcagatggac
      181 cgccaccccc gcgcgggccc gttcggacag ggcctccgca aaggcattcg gcgcctcgcc
      241 cgaccagaag atgtaggact cgaggttgac gctctgccgg gccgagcgga tggcctcgag
      301 catggcgggg aacgcctcgt cgccgttgag gagtgcggtg acctggttgc cgccgaccac
      361 ggccgggccg agcaggtggc tcatggtccg gcggaactgg gggtcgaggg tatcgtagcg
      421 gtgggggagg ggccgctcga tctcctggtc agggctcacc aggttggcgt aaagaatgac
      481 cgcgagcagc gtcatggcca ccgccgcggc gaccaaggcg gcgcgagagg accgaggctt
      541 ggcgggcatg gggggctcct ggaagggttc aggcgcgacg gggccaccgg tttggtgagc
      601 ccggtcgcag cctggcgccg tgatatgggc caacttacgc cctcggagcc ctcaacggca
      661 tagccaggag gcaggcgtga gaggacggca tgcgagagtg agggtggaat acgcggactg
      721 gtaccccggg atcagtccgg ggaagtggca tgatgcgacc tgggtccgcg aggtggtgct
      781 ggcccagcag cgccggggaa gcccgcgatg ggtgatcgac ggccggatcc tcaacgacct
      841 ccacttcgaa ttccagggtg cctcgccccg ctcgccccac cggcccgagc ggatggtcgg
      901 cgccgacatc tcccgtctcc ccgcgggctg aggccggggc tgcccggtcc ggcttcggct
      961 cggtcccgac tctccggcgg ttccattaca aatcatcaaa cacttcgcgc cagcggatgc
     1021 ccgactggtt gacgagcgct tgccggcgga cgatactctc gaaatcccga cccatttcga
     1081 gcgcgcgatg gagtcccgcc gctatctccg gtgcctgggg caaccggccc tgttcggccc
     1141 cgcgggcgag ccgattcgct tccggaccaa gaagcacctg gccctcctgg tgtacctggc
     1201 cgtggagggg cggcggtcgc atcggcggga ccgcctggcg gagctgttct ggcccaaggt
     1261 gccgctggct gaagcgcggc actcgctcgc caccgccctg tcggtgctgc gggcgaggct
     1321 ggg
//
LOCUS       DATIFF010000092         8428 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2168267, whole genome shotgun sequence.
ACCESSION   DATIFF010000092 DATIFF010000000
VERSION     DATIFF010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8428
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2168267"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1400)
                     /locus_tag="VLD58_01425"
     CDS             complement(<1..1400)
                     /locus_tag="VLD58_01425"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSB52979.1"
                     /translation="MATILCVDDEPATGVVLEHHLTKIGHRPLLAASVEEALKTIART
                     PIDLIIADYRMPKATGLDLLGVLEKEGYQVPVIIMTGYSSIEHAVISIKSGAIDYLTK
                     PIRPETLEIAVTQALEVMRLRRENEQFRREINKFRSTRSLIGESQPFRRVMETIATVA
                     PTKATVLLEGESGTGKELFARAIHDQSPRHDAPFISINCAAMPEGLVESALFGHEKGA
                     FTGATMRAAGAFERAHGGTLLLDEVSEMRLDLQSKLLRVIQEHEFERVGGHQAIRVDV
                     RLIATTNRDLKAEADAGRFRSDLFYRLNVVPIKTPPLRDRKEDLPMLVQHFARRAAEE
                     IGVSVTGVAPETIDLLLRHSWPGNVRELANAVERAVILSRGGVLRPEAFQGILEAVVH
                     RPVAAAPAAGGAASSVAGAVAPAGGEAAAPFNLDELERQAIGRALAATGGNRTRAAKL
                     LGISERTLRNKLNGPR"
     gene            1623..2495
                     /gene="flgL"
                     /locus_tag="VLD58_01430"
     CDS             1623..2495
                     /gene="flgL"
                     /locus_tag="VLD58_01430"
                     /inference="COORDINATES: protein motif:HMM:TIGR02550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009424 - bacterial-type flagellum hook
                     [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgL"
                     /protein_id="HSB52980.1"
                     /translation="MRISNSLLQQRVLENLQRNLSGFAQAQNQVSTGKRFEKLSEDPL
                     AGSQVMTAERGLRGIEQYRRNSTAARTRTDAEEAALTQITDLLTRAKELALQEGSASG
                     TADSRAATKAEVDRIIEQVVQLGNTQVGSEYIFAGDLVTTTPFDAAGTYFGDDGVRKA
                     EVGQGYLVSTSHNGRELLVNSGVLSSLQALSTQLGTGTSSTVGLTATGIDTAFTNVQT
                     LLSTNGARVRQIESAMQNSDALETNLTLRKSDLQEINLEEATTRFVGIQNTLQAALLS
                     TSRVLNTSLTDYLR"
     gene            2492..2956
                     /gene="fliW"
                     /locus_tag="VLD58_01435"
     CDS             2492..2956
                     /gene="fliW"
                     /locus_tag="VLD58_01435"
                     /inference="COORDINATES: protein motif:HMM:NF014660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliW"
                     /protein_id="HSB52981.1"
                     /translation="MTAPVDHPAPSPETLFVASRLFGPLHLPQDQVITMPEGMLGFAG
                     ERRFVLLPASPEGVFWFQSVDDGALIFLLIDPFLFFPGYIVDAPDVPESRTPDVAALT
                     IVTLPRGPREECTVNLQGPLVIDFASRQARQVIQEDDRYHTRHPINLLGKVA"
     gene            2953..4167
                     /locus_tag="VLD58_01440"
     CDS             2953..4167
                     /locus_tag="VLD58_01440"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSB52982.1"
                     /translation="MTAPPLLIDWPVNTATGWGVFGLNLTLQLLRQGRHPALLMAPDL
                     ADCSPVAQALLHQCVLEQQQLAGMLRQSGAGLDCAFPVLRGLDGNFQPHPVSTRVQAR
                     RNIGVLFFEDTTLPPEALERAARHQALIAGSGWNAELLRQRGLTNVHLIPQGIDPAAF
                     HPGPRSGLLDQRFVVFSGGKLEFRKGQDLVVAAFRQFVRRHPDALLLAAWHNAWPATM
                     TGIELTGHVKGLPRVDQAGRLLTGEWLVANGIPAGTFVEVGPLPNWAIAPLYRDADLA
                     LFPNRAEGGTNLVAMEAMACGVPAILSSNTGHLDLVHPSRTFALTRQAPVKGGCPLYR
                     GYEGWGESDVDEILALMEAAYANRDEARRRGQAAAAHMQAEWTWAKRVGELLEVVDGV
                     AAPRPAPVQLRM"
     gene            complement(4157..4636)
                     /locus_tag="VLD58_01445"
     CDS             complement(4157..4636)
                     /locus_tag="VLD58_01445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52983.1"
                     /translation="MRISLLLLALTATTATAQSRPPVLYFQFAGEGLGFSANLDVGVT
                     QSVRLRAGAGWLWTAATVPVSASYLLSRRNSTFEIGAGATLLIPPGRDTASNGFLERM
                     IEESFLLRGQDKMVVPMALFGWRYHPHDGAILRVTLTPLLLRGQAHMYGGASFGFTF"
     gene            complement(4791..6374)
                     /locus_tag="VLD58_01450"
     CDS             complement(4791..6374)
                     /locus_tag="VLD58_01450"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HSB52984.1"
                     /translation="MTAVPLSATEVDTPAERITFDAGGRQFAVTYPSGELMRTIVREI
                     LEGREYPRLELPDGPPSVILDIGANVGATAVYFRAAYPGARILCYEPSAENFVWLQAN
                     ARPLDGVEVFPYGLFDRAAECPLYTGESQCAQHSVIPNAGTTSRHEVVELRPAAEEMA
                     ARGVSEVSILKVDTEGCELPILRSLLPALKRVDVIAVEYHSEEDRKAIDALLSERFLL
                     LSATASQLHQGRVTYLSRDVVRRHPGLEAGRIAPIGSDGKPDPMTAATLGFETSTGRK
                     SVELLLDRSSYTQRLMIAALESGQFYEPEVSYFFTNVLQPGDTVVDIGAHIGYFSLLA
                     GRTVGPTGRVYAFEPEPTNYRRLRDHLVQNGLDQVQSFNVALGAVPGEAQMFVNADND
                     GGHALWDVARHRLCERTRKEGKRIAVPMVVLDHVLSGLEPERGPRLVKIDAEGMEYEI
                     LKGGLRTILGHAVPFVICEVNRFALEQMGSSEGKLRQFMRLIGYQVSLLKPDGTGLQP
                     LADDEFIASESVFNLLFHH"
     gene            complement(6393..>8428)
                     /locus_tag="VLD58_01455"
     CDS             complement(6393..>8428)
                     /locus_tag="VLD58_01455"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSB52985.1"
                     /translation="LHQAGRLREAEPLYKEVLAVSPDHPDALHLSGVLAHQAGRHVEA
                     LELIDRAIARSPNFTDAHNNRGNILRVLGRPEEAMAAYRHSINLAPSHALPWSNLGNA
                     LRDVGRLDEATRAYREAISRRPEFAEAHLNLGIVLQELGRSTEALAAFEAATRARPDF
                     APAQDSLGNALRDAGRLHEAIEAYRRAVSLDPAFTTGYCNLGAALWQAGEYREAADVL
                     QAALALDPNRPEAHNHMGNVCKSLGYLNQALSAYRQALAHKPDFAVAHFNLGVLLNEL
                     DQPAEALNEYRAALGFAPEFADAHSNLGATLMRLDRPSEAITAYRRALELKPDFAGAW
                     YNLGNALSEECRPREAVAAFDRALAIDPDYAMAHWNRGLAYLTAGDYAKGWEGYEWRW
                     RVADLKLTERAFPFPRWKGEPLQGKTILVHSEQGLGDTLMFARYLPLVAARGGRVVLE
                     CQAPLTRLLEAMPSVAQVVAQGDPIPENVACHVPLLSLAALLNTRLGSIPDELPYLPS
                     WTWSNRVPVVPEGKGLKVGIVWGGAAKPTRKRSVPLNLLEPLFTLPGISWYSLQMGEH
                     AAALMDLPENRRPANLGPMIRDFFDTAALVGQLDLVISIDTSVAHLAGGLGANLWVML
                     MSAPDWRWVSGDTESPWYPQARLFRQPRPGDWASVIDEVRRALLAAVTPSEAV"
BASE COUNT         1388 a         2913 c         2829 g         1298 t
ORIGIN      
        1 tccctcggcc cattcaactt gttgcgcagc gtccgctcgc tgatcccgag cagcttcgcg
       61 gcccgggtcc gattaccgcc ggtcgcggcc agggcccggc cgatcgcctg acgctccagt
      121 tcgtccaggt tgaatggcgc cgcggcctcg ccaccagcgg gcgccaccgc accggccacg
      181 gaagacgccg ctccgccagc agccggcgcg gcggccacgg gccggtgaac caccgcctcg
      241 aggatgccct ggaatgcttc gggccggagc acgccgccac gggagaggat caccgcccgc
      301 tccaccgcgt tcgccagttc gcgcacgttc ccgggccagg agtggcgcag gagcaggtcg
      361 atcgtttcgg gcgccacgcc ggttaccgag acgccgatct cctccgccgc ccggcgggcg
      421 aagtgctgca ccagcatcgg caggtcttcc ttgcggtcgc gcagcggcgg cgtcttgatc
      481 ggcaccacgt tgagccggta gaacaggtcg ctgcggaacc ttcccgcatc ggcctcggcc
      541 ttgagatcgc ggttggtcgt cgcgatgagc cgcacatcca cccggatcgc ctggtgtccc
      601 cccacccgtt cgaactcgtg ctcctggatc acccggagga gcttcgactg gaggtcgagc
      661 cgcatctccg agacttcgtc gagcaggagc gtgccaccat gggcccgctc gaacgcgccg
      721 gccgcgcgca tggtggcgcc ggtgaaggcg cccttctcgt ggccgaagag cgcgctctcg
      781 accagcccct cgggcatggc cgcgcagttg atgctgatga agggggcgtc gtgccgcggg
      841 ctctggtcgt gaatggcgcg ggcgaagagc tccttgccgg tccccgactc gccctcgaga
      901 aggacggtgg ccttggtcgg cgccaccgtg gcgatggtct ccatcacccg gcggaacggc
      961 tggctctcgc cgatgaggga ccgggtcgac cggaacttgt tgatctcacg gcggaactgc
     1021 tcgttctccc ggcgcagccg catcacctcg agcgcctggg tcaccgcgat ctccagcgtc
     1081 tcgggccgga tgggcttggt gaggtagtcg atggcgccgg acttaatgga gatgaccgcg
     1141 tgttcgatac tggaatagcc ggtcatgatg atcaccggga cctggtaccc ctctttctcc
     1201 agcacgccga ggagatcgag gcccgtggcc ttgggcatcc ggtagtcagc aatgatcaga
     1261 tcaatgggag tgcgggcgat cgtcttgaga gcttcttcaa cgctggccgc cagcagaggg
     1321 cggtgcccga tcttggtgag gtggtgctcc agcacgacgc ccgtggccgg ctcgtcgtct
     1381 acgcaaagga tcgtggccat actccccccg cttctcccga taggaaccgt acacccgatc
     1441 gctcgacatg cttgagtcga ggcggcaatc gggacgagga aggggggtcc tgtcccgaag
     1501 agccggcctc aagagcgcgc tgcaaaccct caagtttcga gcaatttagc cgatacggaa
     1561 aatattgcca ccctcccggg ggaccctcag catgcggtcc cgacaaccaa ggaaggccgg
     1621 gtatgcgcat ttcgaacagt ctgttgcagc agcgggtact ggaaaacctg cagcgcaacc
     1681 tctccggttt cgcccaggcc cagaaccaag tctcgaccgg caaacggttt gagaagctga
     1741 gtgaagatcc gctggccggg tctcaggtaa tgacggccga gcgagggctc cggggaatcg
     1801 agcagtaccg tcggaattcc accgcggccc gcacccgcac agacgccgaa gaagccgcgc
     1861 tcacccagat caccgatctg ctgacccgcg cgaaggagct ggcgctccag gaaggctccg
     1921 cgagcggcac cgccgactcc cgcgccgcta ccaaggccga ggtcgaccgg atcatcgagc
     1981 aggtggtcca gctgggcaac acccaggtcg gcagcgaata catcttcgcc ggcgacctcg
     2041 tcaccaccac tcccttcgac gccgcgggca cctacttcgg tgacgacggc gtccgcaagg
     2101 cggaagtggg ccagggctac ctggtgagca ccagtcacaa cggccgcgag ctgctggtga
     2161 acagcggcgt gctctccagc ctccaggcgc tgagcactca gctcggcacc ggcacctcgt
     2221 ccactgtggg cctcaccgcc accggcatcg acaccgcctt caccaacgtg cagacgctct
     2281 tgagcaccaa cggggcgcgc gtgcgccaga tcgagtccgc catgcagaac tccgacgcgc
     2341 tggaaaccaa cctgacgctc cgcaagagcg acctccagga gatcaatctg gaagaggcga
     2401 ccacccggtt cgtcgggatc cagaacaccc tccaggcggc gctgctctcc acctcgcggg
     2461 tgctcaacac ttcactcacg gactatctcc ggtgaccgcc cccgttgatc acccggcgcc
     2521 gtcgcccgag acgctcttcg tggcgagccg cctcttcggc ccgctgcatc tgccgcagga
     2581 ccaggtcatc accatgcccg aagggatgct cggcttcgcg ggcgagcgcc gcttcgtgct
     2641 gctgccggcg tcgcccgaag gggtgttctg gttccagagt gtcgacgacg gcgccctgat
     2701 cttcctcctg atcgacccgt tcctcttctt ccccggctac atcgtcgacg ccccggacgt
     2761 gccggagtcc cgcaccccgg atgtcgcggc gctcacgatc gtgacgctcc cccgcggccc
     2821 ccgggaagag tgcaccgtca atctccaggg acccctggtg atcgacttcg cctcgcggca
     2881 ggcgcggcag gtgatccagg aagacgatcg ctaccacacc cgccacccga tcaacctgct
     2941 gggtaaggtg gcgtgacggc cccgccgctc ctgatcgact ggcccgtcaa caccgccacc
     3001 ggctggggcg tcttcggact caatctcacg ctgcagctgc tccggcaggg ccggcacccg
     3061 gccctgctca tggcgcccga tctggccgac tgctctccgg tcgcccaggc cctgctgcat
     3121 cagtgtgtcc tcgagcagca gcagctcgcc gggatgctca ggcagagcgg cgcggggctc
     3181 gactgcgcct tcccggtgct ccgcgggctc gacggcaact tccagcccca tccggtcagc
     3241 acccgggtcc aggcccggcg caacatcggg gtcctgttct tcgaggatac cacccttcca
     3301 cccgaagccc tcgagcgggc cgcgcgccac caggccctga tcgcgggatc gggctggaat
     3361 gccgagctcc tccggcagcg ggggctcacc aatgtccacc tgattccgca gggcatcgat
     3421 ccggcggcgt ttcacccggg accacgctcc gggctcctgg accagcgatt cgtggtcttc
     3481 tccggcggca agctcgagtt ccgcaagggc caggacctcg tggtcgcggc attccggcag
     3541 ttcgtgcgcc ggcacccgga tgccctgctc cttgccgcgt ggcacaacgc ctggccggcc
     3601 accatgactg gcatcgagct gacggggcat gtgaagggct tgccgcgggt ggaccaggcg
     3661 ggccggcttc tcaccgggga gtggctggtg gcgaacggga ttccagccgg gaccttcgtc
     3721 gaagtgggcc cgctgccgaa ctgggccatc gcgccgctct accgcgacgc cgatctcgcc
     3781 ctcttcccca accgcgccga gggcggcacc aacctggtcg ccatggaagc gatggcgtgt
     3841 ggcgtgccgg ccatcctctc cagcaacacc gggcatctgg acctcgtcca cccgtcgcgc
     3901 accttcgccc tcacccggca ggccccggtg aagggcggct gtccgctcta tcgaggctat
     3961 gaaggctggg gggaatcgga cgtcgacgag atcctggcgc tgatggaagc ggcctacgcc
     4021 aatcgggacg aggcccgccg ccggggccag gccgcagccg cacacatgca ggcagagtgg
     4081 acctgggcga aacgggtggg cgagttgctg gaggtagtgg acggagtggc ggctccgcgc
     4141 ccggccccgg tgcaactcag aatgtgaatc cgaagctcgc cccgccgtac atgtgagcct
     4201 gcccccgcag cagcagcggc gtcagcgtga ctcgcaggat cgccccgtca tgggggtgat
     4261 agcgccagcc gaacagcgcc atcggcacta ccatcttgtc ctgtccccgc agcaggaagc
     4321 tctcctcgat catccgctcc agaaaaccgt tcgatgccgt gtccctgccc gggggaatca
     4381 ggagcgtcgc cccggccccg atctcgaagg tggaattgcg gcgggagagg aggtaactcg
     4441 ccgacaccgg caccgtcgcc gcggtccaga gccaccctgc cccggccctg agtcgaactg
     4501 actgtgtcac gcccacatcc agatttgccg agaagccgag tccctcaccg gcaaactgga
     4561 agtagagcac cggaggacgc gactgcgcgg tcgcagtggt ggccgtcagc gccagcaaca
     4621 gcaaggagat acgcatggac cgtccgacga ggggggtggt gccacgccag ctgtgttagg
     4681 atggaacgat gggagggaaa cgcaggcacc atgccgcgtc ctgcgtcatc cctggtagcg
     4741 aaagcgacga gggctaacgg ccaatggcca aaggccaacg gccaacggcc ctagtggtga
     4801 aacagcaggt tgaacacact ctccgatgcg atgaactcgt cgtccgccaa cggctggagt
     4861 ccggttccgt ccggcttgag gagcgagacc tgatagccga tgagccgcat gaactggcgg
     4921 agctttcctt cgctcgaccc catctgctcc agcgcaaacc ggttcacttc gcaaatcacg
     4981 aacggcaccg cgtgacccag gatcgtccgg agcccgccct tgaggatctc gtactccatc
     5041 ccctcggcgt cgatcttgac gagccgcggg ccccgctccg gctcgagccc cgagagcacg
     5101 tggtccagca ccaccatcgg caccgcgatc cgcttccctt ccttgcgggt gcgctcgcag
     5161 agccggtgcc gcgccacgtc ccacagcgca tggccgccgt cgttgtcggc gttgacgaac
     5221 atctgcgcct cgcccggcac ggcgccgagt gcgacgttga agctctggac ctggtcgagt
     5281 ccgttctgga ccaggtgatc acggaggcgg cggtagttgg tcggctccgg ctcgaaggcg
     5341 tagacccgcc cggtgggccc gaccgtccgc cccgcgagga ggctgaagta cccgatgtgg
     5401 gcgccgatgt cgaccaccgt gtcgcccggc tgcagcacat tggtgaagaa gtaggagacc
     5461 tccggctcgt agaactggcc tgactcgagc gccgcgatca tgagccgctg ggtgtagctc
     5521 gagcggtcga gcaggagctc gacgctcttc cgcccggtcg aggtctcgaa gccgagggtc
     5581 gcggcggtca tcgggtcggg cttgccgtcg ctcccgatcg gggcgatgcg cccggcctcg
     5641 agccccggat gccggcgcac cacgtcgcgc gagagatagg tcacccgccc ctggtggagc
     5701 tggctcgcgg tcgccgaaag cagcaggaac cgctccgaca gcagggcgtc gatcgccttg
     5761 cggtcctctt ccgagtgata ctccaccgcg atcacatcca cccgcttgag ggccgggagc
     5821 aggctccgga gaatcgggag ctcacacccc tccgtgtcga ccttgagaat cgagacctcg
     5881 ctgaccccac gcgccgccat ctcttcggcg gcgggacgca actccaccac ctcatggcgg
     5941 ctggtggtcc cggcgttggg aatcaccgaa tgctgggcgc actggctctc accggtgtag
     6001 agcgggcact cggcggcgcg gtcgaacagg ccgtagggaa atacttcgac gccgtcgagc
     6061 ggccgggcat tggcctggag ccagacgaag ttctcggccg agggttcgta gcagaggatg
     6121 cgggcgccgg gataggcggc gcggaagtag accgcggtcg cgccgacatt ggccccgata
     6181 tcgagaatca cggagggagg gccgtccggc agctcgaggc ggggatactc ccggccctcg
     6241 agaatctccc ggacaatggt ccgcatcagc tcgcccgagg gatacgtcac cgcgaactgg
     6301 cggcccccgg cgtcgaacgt gatccgttcg gcaggtgtgt cgacttccgt cgcggaaagc
     6361 ggtacagccg tcatcggtaa ctccagggag agttaaacag cctcggacgg ggtaacggcg
     6421 gcgagcagcg cccggcgcac ttcgtcgatc accgaggccc agtcaccggg acgcggctga
     6481 cggaacaacc gggcctgcgg ataccagggc gattcggtgt cgccactcac ccagcgccag
     6541 tcaggcgccg acatcagcat cacccacaga ttggcgccga ggccgccggc gaggtgggcc
     6601 accgaggtgt cgatcgagat caccaggtcg agctgcccca ccagtgccgc ggtatcgaag
     6661 aagtcacgga tcatcggccc gagattggcc gggcggcggt tctccgggag gtccatcagc
     6721 gccgcggcgt gctcgcccat ctggaggctg taccaggaaa tccccggcaa cgtaaagagc
     6781 ggctccagca ggttgagcgg caccgaccgc ttgcgggtcg gctttgccgc gccgccccag
     6841 acgatcccga ccttgagtcc cttcccttcc ggcaccaccg gtacccggtt gctccaggtc
     6901 cagctcggca ggtagggcag ctcgtcggga atcgacccca gccgggtgtt gagaagcgcg
     6961 gcgagcgaga gcagcggcac gtggcaggcg acgttctccg gaatcgggtc gccctgggcc
     7021 accacctgcg ccacggacgg catcgcttcg agcagccggg tgagcggcgc ctggcactcg
     7081 agcacaaccc ggccgccccg ggccgcgacc agcgggaggt agcgggcgaa catcagcgtg
     7141 tcgcccagcc cctgctcgga gtggaccagg atagtcttgc cctggagcgg ctcccccttc
     7201 cagcgcggga acgggaaggc ccgctcggtc agcttgagat cggccacccg ccagcgccac
     7261 tcgtacccct cccagccctt ggcatagtca ccggccgtga gatacgcgag tccgcggttc
     7321 cagtgggcca tcgcatagtc gggatcgatc gcgagggcgc ggtcgaaggc ggcaaccgcc
     7381 tcacggggcc ggcactcttc cgagagcgcg ttgccgagat tgtaccaggc gccggcgaag
     7441 tcgggcttga gctcgagggc ccggcggtag gcggtgatcg cctccgacgg acggtcgagc
     7501 cgcatcaggg tggcgccgag attcgagtgg gcatcggcga actcgggcgc gaagcccagc
     7561 gccgcccgat actcgttgag cgcctcggcc ggctggtcca actcattgag gagcacaccg
     7621 agattgaagt gggcgacggc gaagtccggc ttgtgcgcca gcgcctggcg gtaggccgag
     7681 agcgcctggt tcaggtagcc cagcgacttg cagacgttgc ccatgtgatt gtgggcctcg
     7741 gggcgattgg gatcgagcgc cagcgcggcc tggagcacgt cggccgcctc gcgatactct
     7801 cccgcctgcc agagtgccgc acccagattg cagtagccgg tggtgaacgc cgggtcgagc
     7861 gacaccgccc ggcggtaggc ttcgatcgcc tcgtggagcc ggcccgcatc acggagcgca
     7921 ttccccaggc tgtcctgcgc cggggcaaag tcggggcggg cccgggtcgc ggcctcgaat
     7981 gccgccaacg cctcggtgga cctccccaat tcctgaagca cgatgcccag attgagatgg
     8041 gcttcggcaa attcggggcg gcggctgatg gcctcgcgat acgcacgggt ggcctcgtcc
     8101 agccggccga cgtcgcggag cgcgttgccg agattggacc aggggagcgc gtgcgatggg
     8161 gccaggttga tggagtggcg gtaggccgcc atcgcttctt cggggcggcc caggacccgg
     8221 aggatgttcc cccggttgtt gtgcgcgtcg gtgaagttgg gcgagcgggc gatggcccgg
     8281 tcgatcagct ccagggcctc gacgtggcgg ccggcctgat gggccagcac cccggagagg
     8341 tgcagggcgt cggggtgatc cggggaaacc gccagtactt ccttatatag gggttcggcc
     8401 tcgcgcaggc gtccggcctg gtgaagct
//
LOCUS       DATIFF010000093         1749 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1245365, whole genome shotgun sequence.
ACCESSION   DATIFF010000093 DATIFF010000000
VERSION     DATIFF010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1749)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1749)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1749
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1245365"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..389)
                     /locus_tag="VLD58_01460"
     CDS             complement(<1..389)
                     /locus_tag="VLD58_01460"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB52986.1"
                     /translation="MANREKSAATAPLVLIANDQEWSARSLESILGPHGYSVVRAYTG
                     QQALERARTALPDLIILDAQMPDMHGFDVCRTLRGDPRFGTTTPIVITTSGPSGRTQR
                     LEAYRAGAWEFLGQPLDGEALLLKLDT"
     gene            1225..>1749
                     /locus_tag="VLD58_01465"
     CDS             1225..>1749
                     /locus_tag="VLD58_01465"
                     /inference="COORDINATES: protein motif:HMM:NF014453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HSB52987.1"
                     /translation="MPRPRTSGAVLAVVEAPPVVTATWLERVVNILLASLALLLTSPV
                     LLLIAVAIKLTSRGPVLYTQERVGLDRRGHGRDNPHPRRRRDLGGQPFTIYKFRTMRV
                     DAERESGAVWAAQDDPRVTPVGRLLRQYRLDEIPQLLNVLRGEMNIVGPRPERPAIFA
                     ELREHIAEYPLRQRT"
BASE COUNT          274 a          595 c          611 g          269 t
ORIGIN      
        1 aaggtgtcga gcttgaggag cagcgcctcg ccgtccagcg gctggcccag aaactcccac
       61 gcgccagccc ggtacgcctc cagccgctgg gttcggccgg agggtcccga ggtggtgatc
      121 acgatcggcg tcgtggtgcc gaagcgggga tcgcctcgga gggtgcgaca gacgtcgaag
      181 ccgtgcatgt ccggcatctg ggcatcgaga atgatgaggt ccggcaatgc cgtccgagcc
      241 cgctccaacg cctgctgccc cgtgtacgcc cggaccacac tgtagccgtg agggcccagg
      301 atgctttcga gggaccgcgc agaccattcc tggtcgttcg cgatcaggac caggggggcg
      361 gtggcggcgc tcttctcacg gttagccatg tagcatgtgc cagggttcga ggacggccga
      421 gccatcgggc tcggcaaccg caggagtcgt gcgggcgacg gcgaaacaga caagccctac
      481 gagagtaatg gcttagcggt tgacatcgtg gtgcgtccgg gaccaaggcg cagaggggcc
      541 gccacagttt gggggaaatc gtgcgacgga atgcgctgtg accagattgt ggcggcaatt
      601 ctctgccgat gtggtcccaa agcaacgccg tcccagctgc cccggactcg gccgacgcgc
      661 cggccggcca cccaaaacta ttgcgtgtca gcgacttggg ctagacctcc ccggcggagt
      721 cacgccggcc gcgttcccac cagaatcgcg gcgtcatcct tgaagaagta ccggtggccc
      781 caagggatcg tgcaaccttt tgcagagtag aagtcatgtc tcactcgccg gtccatgacg
      841 atgccgcgca gcccggcccc gagcccgagg ctcgcccgag caccgagacc ctccctgccg
      901 agcagcttcc ggcggagcgg tctcggttca gccggtggtt ggcgcggttc ggtttgggtg
      961 aggcccccga tcccctgctg ggcccggctc ggccgagcgc cccggcgcgg cgtctgccga
     1021 tgtgaagcgg ccgctcgacg ccccctgtga ctcaagtcac tgggaagccg agcggccggc
     1081 cctagcttga ctcgttcgta acgtagggcg gttacggccc ggtggcgggt ctcacctcca
     1141 cgaaagatga gcatgggatc agccagttcc ggggtacggc gccagcacgc acacgacacc
     1201 gtcgcgggac ggatctcgcg tccggtgccg aggccccgaa cctccggcgc cgtcctcgcg
     1261 gtagtcgagg ctccgccggt cgtgaccgcg acctggctcg agcgcgtggt aaacatcctt
     1321 ctcgcttccc tagcgctgct gctgacctct cccgtgctgc tgctgatcgc ggtggcgatc
     1381 aagctgacct cgcgggggcc ggtgctctac acccaggaac gggtggggct cgaccgccgg
     1441 gggcatgggc gggacaaccc tcacccccgg cgccgccggg acctgggggg ccagcccttc
     1501 accatctaca agttccgcac catgcgggtg gacgccgagc gggagagcgg cgcggtgtgg
     1561 gccgcccagg acgatccccg ggtcaccccg gtgggccggc tcctgcggca gtaccggctg
     1621 gacgagatcc cccagctgct caacgtgctg cggggggaga tgaacatcgt gggcccccgg
     1681 ccggagcggc ccgccatctt cgccgagttg cgggagcaca tcgccgagta cccgctgcgg
     1741 cagcggacc
//
LOCUS       DATIFF010000094         1475 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_476166, whole genome shotgun sequence.
ACCESSION   DATIFF010000094 DATIFF010000000
VERSION     DATIFF010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1475)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1475)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1475
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_476166"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            274..957
                     /locus_tag="VLD58_01470"
     CDS             274..957
                     /locus_tag="VLD58_01470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000373608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HSB52988.1"
                     /translation="MGGFGRARELTGTTAATFMAGVYRWMTLGLAVTAGVALYIASDI
                     TRAQTVAGFMWPIIGGQLILVLALSFLAQRVGGPAAALMFVVYAGLNGLMLSGIFFVY
                     SIGSIGTAFLVTAGSFAALSLYGTVTKRDLSAWGTFLFMGLIGVVIASVVQFWWSSPG
                     FTFVLSCATVVVFAGLTAYDTQKLRALGAQYAGTGLTSITIVGALNLYLDFINLFLAL
                     LRLFGDRRR"
     gene            complement(1078..>1475)
                     /locus_tag="VLD58_01475"
     CDS             complement(1078..>1475)
                     /locus_tag="VLD58_01475"
                     /inference="COORDINATES: protein motif:HMM:NF013517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="high-potential iron-sulfur protein"
                     /protein_id="HSB52989.1"
                     /translation="GRGDPHPRRRQHVNGHDDETTRFDRRRALQILGAGLGAATGVLA
                     LSGSEAHAEAALNCKNKIPIDPVAVQMRRNLQYSEKSNAPGKKCSNCAQYEAGKYKEC
                     GGCKLFAGAVNPEGNCLSWAAKLGAPPGK"
BASE COUNT          178 a          512 c          517 g          268 t
ORIGIN      
        1 tggcgtggtc cgcgcctccg cctctcgcat cgtcaacatc cagggaggtg gcggggtcct
       61 gccgctcctc gagcagtcgg tctgggcgaa gctccggagt gtgctccggg cggaatcctg
      121 accggtcccg gagtgttggg acgctggccc ccgccccggc ctgcgttatg agagggcgca
      181 tccggggccg ggtcggcccc caaggagaag gcaacgatgg cctgggaatt cgatgcacgc
      241 aaggcagccc gtgacggccg tgacctcggc gagatgggcg gcttcgggcg cgcccgcgag
      301 ctcaccggaa cgaccgccgc gaccttcatg gcgggggtgt accgctggat gacgctgggc
      361 ctggcggtca ccgccggcgt ggcgctgtac atcgcgagcg acatcacgcg ggcccagacg
      421 gtcgccggtt tcatgtggcc gatcatcggc gggcagctga ttttggtgct ggcgctgtcg
      481 ttcctggcgc agcgggtcgg tggcccggcc gcggcgctca tgttcgtggt ctacgccggg
      541 ctcaacggcc tgatgctgag cgggatcttc ttcgtctact cgatcggatc gatcgggacc
      601 gcgttcctgg tcaccgcggg gtcgttcgcc gccctgagcc tgtacggcac cgtgaccaag
      661 cgcgacctga gcgcctgggg cacgttcctc ttcatggggc tcatcggcgt ggtgatcgcc
      721 agcgtcgtcc agttctggtg gagcagcccg gggttcacct tcgtgctgtc ctgcgccacg
      781 gtggtcgtct tcgccggcct gaccgcgtac gacacccaga agctccgggc gctcggcgcg
      841 cagtacgcgg gcaccggcct gacctcgatc accatcgtcg gggcgctgaa cctctacctg
      901 gacttcatca acctgttcct ggcgctgctc cggctgttcg gcgaccggcg gcggtaggca
      961 gcgagacagg aagtccaggg ccggtccgcg gtcgtccacg cgccggcgct gttcagggac
     1021 gccgagcgga ccgaccccgg gccctgaccg gcggggcgcc tccgaccgct ccctggctca
     1081 cttccctggg ggggccccga gcttcgccgc ccagctgagg cagttgccct cggggttcac
     1141 cgcgcccgcg aagagcttgc agccaccgca ttccttgtac ttgcccgcct cgtactgagc
     1201 acagttgctg cacttcttgc cgggcgcgtt cgacttctcc gagtactgga ggttgcggcg
     1261 catctgcacc gcgacggggt cgatcgggat cttgttcttg caattcagtg cggcctcggc
     1321 gtgcgcctcc gagccgctca acgcgaggac gccggtcgcc gcaccgagtc ccgctcccag
     1381 gatctggagc gcccgccggc ggtcgaagcg cgtggtctcg tcgtcgtgtc cgttcacgtg
     1441 ttgtctcctc cggggatggg gatcgccccg cccct
//
LOCUS       DATIFF010000095         1811 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_783779, whole genome shotgun sequence.
ACCESSION   DATIFF010000095 DATIFF010000000
VERSION     DATIFF010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1811
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_783779"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..259)
                     /locus_tag="VLD58_01480"
     CDS             complement(<1..259)
                     /locus_tag="VLD58_01480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF779 domain-containing protein"
                     /protein_id="HSB52990.1"
                     /translation="MIERVAISPAAEAVLRQLVAEHGRLLFHQSGGCCDGSAPMCYPA
                     AEFRVGSRDVHLGDVAGVPVYIGGQQYELWRHTQLLIDVVPG"
     gene            complement(264..>1811)
                     /locus_tag="VLD58_01485"
     CDS             complement(264..>1811)
                     /locus_tag="VLD58_01485"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSB52991.1"
                     /translation="NVASRQEVASLPLSAAGFTPSVPLRARYDNWIGGEYRPPVRGQY
                     FTNITPITGQPLCEVARSTHEDVDRALDAAHAAALSWNLTSPTTRSNILLKIADRMEQ
                     HLETLAWIETLDNGKPIRETRAADLPLAIDHFRYFAGALRAQEGSIGELDHDTVAYHF
                     HEPLGVVGQIIPWNFPLLMAVWKLAPALAGGNCVVIKPAEQTPVSILAFMELIADILP
                     SGVVNVVQGFGVEAGKPLASSPRIAKIAFTGETTTGRLIMQYASENLIPVTLELGGKS
                     PNIFFADVMEGDDDFFDKTLEGFAMFALNQGEVCTCPSRALVQESIYDKFMERAVART
                     RAIVEGNPLDPATMIGAQASNDQLEKILSYIDIGKKEGAKVLTGGARRVHPGELKDGY
                     YVQPTIFEGHNRMRIFQEEIFGPVVSVTKFKTADDALAIANDTLYGLGAGVWSRDANT
                     CYRMGRAIKAGRVWTNCYHAYPAHAAFGGYKQSGMGRETHKMMLDHYQQTKNLLVSYS
                     PKKLGFF"
BASE COUNT          282 a          595 c          614 g          320 t
ORIGIN      
        1 gtcccggcac cacgtcgatc agcagctggg tgtggcgcca cagctcgtac tgctgccccc
       61 cgatgtacac cggcaccccg gccacgtcac cgagatgcac gtcccggctc ccgacccgga
      121 attcggcggc gggatagcac atcggggcgc tgccatcgca gcagcccccc gactggtgga
      181 agagcagccg gccgtgctcc gccaccagct ggcgaagcac ggcctcggct gcgggcgaga
      241 tggcgacccg ctcgatcatc ggtctagaag aacccgagct tcttggggct gtagctcacc
      301 agcaggttct tggtctgctg gtagtggtcc agcatcatct tgtgggtctc gcgccccatc
      361 cccgactgct tgtacccgcc gaacgcggcg tgcgccgggt aggcgtgata gcagttggtc
      421 cagacccgtc ccgccttgat cgcccggccc atccggtagc aggtgttcgc gtcccggctc
      481 cacaccccgg cgcccagccc gtagagcgtg tcgttggcga tggcgagggc gtcgtcggcc
      541 gtcttgaact tcgtcaccga caccaccggg ccgaagatct cctcctggaa gatccgcatc
      601 cggttgtggc cctcgaagat cgtgggctgg acgtagtagc cgtccttgag ctcgcccgga
      661 tgcacccggc gggcgccgcc ggtgaggacc ttggcaccct ccttcttccc gatgtcgata
      721 tagctcagga tcttctccag ctgatcattg gaggcctggg ctccgatcat ggtggcggga
      781 tcgagcggat tcccctcgac gatggcccgg gtccgcgcca ccgcccgctc catgaacttg
      841 tcgtagatcg actcctgcac cagcgcccgg gaaggacagg tgcagacttc gccctggttg
      901 agcgcgaaca tggcgaagcc ttcgagggtc ttgtcgaaga aatcgtcgtc tccctccatc
      961 acgtcggcga agaagatgtt gggcgacttg ccgcccagct cgagcgtcac cgggatcagg
     1021 ttctcggagg cgtactgcat gatgagccgg ccggtggtgg tctcgccggt gaaggcgatc
     1081 ttggcgatcc gcgggctcga cgcgagcggc ttgcccgctt ccaccccgaa gccctgcacc
     1141 acgttcacca cgccgcttgg caggatgtcg gcgatcagct ccatgaacgc caggatcgag
     1201 accggggtct gctccgccgg cttgatcacc acgcagttac cgccggcgag cgccggcgcc
     1261 agcttccaca ccgccatcag gagcgggaag ttccagggaa tgatctggcc gaccacgccg
     1321 agcggctcgt ggaagtgata ggcgacggta tcgtggtcca gttcgccgat gctcccttcc
     1381 tgcgcccgga gtgcgcccgc gaaatagcgg aaatgatcga tggcgagcgg caggtcggcg
     1441 gcccgggtct cgcggatcgg cttgccgttg tcgagggttt cgatccaggc gagggtctcg
     1501 aggtgctgct ccatccggtc ggcaatcttg agcaggatgt tcgaccgggt ggtgggcgag
     1561 gtcaggttcc agctcagggc cgcagcgtgg gcggcatcga gggcgcggtc cacgtcctca
     1621 tgggtcgacc gggcgacttc gcagagcggc tggccggtga tgggcgtgat gttggtgaag
     1681 tactggcccc ggactggcgg gcggtactct ccgccgatcc agttgtcgta gcgggcccga
     1741 agcggtacgg acggcgtaaa accggcggcg gacaagggca gcgacgcgac ctcttgccgc
     1801 gaggcgacgt t
//
LOCUS       DATIFF010000096         1103 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_15157, whole genome shotgun sequence.
ACCESSION   DATIFF010000096 DATIFF010000000
VERSION     DATIFF010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1103
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15157"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(14..>1103)
                     /locus_tag="VLD58_01490"
     CDS             complement(14..>1103)
                     /locus_tag="VLD58_01490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52992.1"
                     /translation="DSLAPAAPPARAQSAYLFTNESEASARLAMRLLREGYRVNASTR
                     PLVADGVSYPRTTYVLRVQRNPAGLHERITQLAQETGARVIAVQSAFADTGQVGVGSE
                     EVVALKSPRILLAAGDGVDQTAFGAVWFYFERELGIPIVPINLKDLDDGSLGDYNVLI
                     IPSGSASRMASELGDDGARRLKTWVENGGAVIGFGGAVSLLGRKEVDLTSVKVLSPDS
                     TASKDTTVTDAMRPAPPLVSPTAAGGNRPEFIPGAIFRATLDRTHWLTGGYERDQLPV
                     FLETSTLLKPSEKGASPVVFTGTDLTLSGFTWPENTEKHLRNSVWASVESQGRGSVIL
                     FAENPVYRGFWRGPSKLLTNAVLFGPNR"
BASE COUNT          186 a          368 c          376 g          173 t
ORIGIN      
        1 gtgagcggca tcgtcaacga ttcggcccga agagaaccgc gttggtgagc agtttcgagg
       61 gaccgcgcca gaagccgcgg tacaccgggt tctcggcaaa gaggatgacc gagccacggc
      121 cctgactctc caccgaagcc cacaccgaat tccggagatg cttctcggtg ttctcgggcc
      181 aggtgaatcc cgagagggtg agatcggtcc cggtgaagac gaccgggctc gctcccttct
      241 ccgacggctt gaggagagtg ctggtctcga gaaaaaccgg cagctggtcc cgctcatagc
      301 cgccggtaag ccagtgggtc cggtcgagcg tcgcccggaa gatcgccccg ggaatgaact
      361 cgggacggtt cccgccggcc gccgtggggg acaccagggg cggcgcgggc ctcatcgcgt
      421 cggtgacggt ggtgtccttt gaggcggtgc tgtcgggaga gaggaccttg acgctggtga
      481 ggtcgacctc cttccggccg agcaggctca ccgcgccgcc gaagccgatc acggcgccgc
      541 cgttctcgac ccaggtcttg agccggcggg ccccatcgtc cccgagctcg ctcgccatcc
      601 ggctggcaga tcccgaggga atgatgagga cgttgtagtc gccgaggctg ccatcatcca
      661 ggtccttcag gttgatcggc acgatgggaa taccgagctc gcgctcgaaa tagaaccaca
      721 ccgcgccgaa agccgtctgg tccaccccgt cacccgcggc caggaggatg cgcgggctct
      781 tgagggccac cacttcctca ctcccgacac cgacctggcc ggtatccgcg aatgccgact
      841 gcaccgcgat caccctggcc ccggtctcct gggccagctg ggtgatccgt tcatgcaggc
      901 ccgcgggatt gcgctgcacc cgcagcacat aggtagtacg cgggtagctc accccatcgg
      961 ccacgagcgg acgggtggat gcattgacgc gatacccttc gcgcaacagc cgcatggcga
     1021 gccgggccga ggcttcgctc tcgttggtga acaggtaggc cgactgggcg cgggccggtg
     1081 gcgcggccgg cgccagcgag tcc
//
LOCUS       DATIFF010000097         2317 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_322950, whole genome shotgun sequence.
ACCESSION   DATIFF010000097 DATIFF010000000
VERSION     DATIFF010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2317
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_322950"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1402
                     /locus_tag="VLD58_01495"
     CDS             <1..1402
                     /locus_tag="VLD58_01495"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HSB52993.1"
                     /translation="PRGTAVAHLVGYVGEVTQGDLDASRFAGARLGSVVGRSGLEQEY
                     DDTLRGSSGMRYIEVDARGRLVREQGAAPPLPSVAGKNLRTTIDLDLQFYVDSIWPKG
                     QSGALVAMTPKGEIRALYSTPAYDPNEFIGGISGTEWRRLNTDPTLPLLNRALQVKYP
                     PGSPFKLATAAMALRRGLVDLHSHMPTSCTGGLQFGNRYFKCWDHRGHGSLDLIGAVA
                     KSCDVYFYQLGLRIQLANILADGVTMGFKDRTRVDLVNEVTPTWPASTAYYDKAYGVR
                     GWSNAVTLNLAIGQGENTQTLMNMVRFYAALASETGQSPVPYLVKPDTGGGFDLKLTR
                     DQLNGLRTALIAVVEQGTAARSKTSEFKVAGKTGTAQNPHGNDHGWFIGFAPAEKPEI
                     IIGAIFEFGKHGTAVAPYVVRSLRRYLLGPDSLEGKRVTKLNLPGDAAPAPTPAPGEE
                     PVEPDSAAAPRVQTRR"
     gene            1399..>2317
                     /locus_tag="VLD58_01500"
     CDS             1399..>2317
                     /locus_tag="VLD58_01500"
                     /inference="COORDINATES: protein motif:HMM:NF013279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HSB52994.1"
                     /translation="MNRSLGPDRPLLIAVGLLLLFGLIVLYSAGQTDVPSFAAAGAWR
                     RQIIWIMGGAVVAYAAFRVSPRLLEWAALPVYVIGLLLLGLTLVIGGGAGTAASSKSW
                     LYIGNHAIGQPAEFAKLATLLMLARHLSGRREAPETLREVVPACLIAGAPALLVLLQP
                     DLGSALVFVGVLFAMLFWAGVSPVLIIILASPVASLLLAFNTFAWAGWMVVVSLLWWV
                     GRLYFWEGVAVFGANFAMGAVALPLWRKLAPYQQNRLLTFLNPEVDPQKAGYHAIQSK
                     VAIGSGGWFGNGYLQGPQKRLAFLPEQHTD"
BASE COUNT          338 a          794 c          802 g          383 t
ORIGIN      
        1 cccccgtggc accgcggtgg cccacctggt gggctatgtc ggcgaggtga cccagggcga
       61 tctcgacgcg tcgcgctttg cgggcgcgcg gctgggctcg gtggtgggac ggtcgggact
      121 ggagcaggag tacgatgaca cgctccgggg ctcgagcggg atgcgttaca tcgaggtgga
      181 tgcccggggc cggctggtgc gggagcaggg cgccgctccg ccgctgccgt cggtggcggg
      241 taagaacctc cgtaccacga tcgatctcga tctccagttc tacgtcgata gcatctggcc
      301 caagggccag tccggtgcgc tggtggcgat gacgcccaag ggagaaatcc gggcgctgta
      361 ttcgacgccg gcgtacgatc ccaacgagtt catcggcggc atctcgggca ccgagtggcg
      421 ccggctcaat accgacccga ccctgccgct cctcaaccgg gccctgcagg tgaagtaccc
      481 gcccggttca ccattcaagc tcgccacggc cgccatggcc ctccggcggg gcctggtgga
      541 cctgcacagc cacatgccga cgtcgtgcac cggcgggctg cagttcggca accgctactt
      601 caagtgctgg gaccaccggg ggcacggctc gctcgacctc atcggcgccg tggccaagag
      661 ctgcgacgtc tacttctacc agctcgggct ccggatccag ctcgccaaca tcctggccga
      721 tggcgtcacc atgggattca aggaccggac ccgggtggac ctggtcaacg aagtcacccc
      781 gacctggccg gccagcaccg cctactatga caaggcctac ggcgtccggg gctggagcaa
      841 cgcggtcacg ctcaacctcg cgatcgggca gggagagaat actcagaccc tgatgaacat
      901 ggtgcggttc tacgccgcgc tggcgtcgga gaccgggcag tcgccggtgc cgtacctggt
      961 caagcccgat accggtggcg gattcgatct caagctcacc cgggaccagc tgaacggcct
     1021 gcggaccgcc ctgatcgcgg tggtcgagca ggggaccgcg gcgcgaagca agacctccga
     1081 gttcaaggtg gcgggcaaga ccggcacggc gcagaacccc cacggcaacg accacggctg
     1141 gttcatcggg ttcgccccgg cggagaagcc cgagatcata atcggggcga tcttcgagtt
     1201 cgggaagcat gggacggcgg tggcgcccta cgtcgtccgc tcgctccggc gctatctcct
     1261 tggcccggac agtctcgagg gcaagcgcgt gaccaagctc aatctcccgg gcgacgcggc
     1321 ccccgcgccc acgccggcgc cgggtgaaga gccggtcgaa cccgattcgg ccgcggcacc
     1381 ccgggtccag actcggcgat gaaccgcagc ctcggtcccg accgtccact gctgatcgcc
     1441 gtggggctgt tgctcctctt cggtctcatc gtgctctact cggccgggca gaccgacgtg
     1501 ccgagcttcg cggcggcagg ggcctggcgg cggcagatca tctggatcat gggcggggcc
     1561 gtggtcgcct acgcggcgtt ccgggtctcg ccccggcttc tcgagtgggc ggcgctgccg
     1621 gtgtacgtca tcgggcttct cctccttggc ctgaccctgg tcatcggcgg gggcgcgggt
     1681 accgcggcga gcagcaagag ctggctctac atcggcaacc acgccatagg gcagccggcc
     1741 gagttcgcca agctggcaac cctgctgatg ctggcccgcc acctgtcggg ccggcgggag
     1801 gcccccgaga ccctccggga ggtggtgccg gcctgtctca ttgccggcgc gccggccctc
     1861 ctggtcctgc tccagccgga cctgggcagc gccctggtct tcgtgggagt cctgttcgcg
     1921 atgctcttct gggccggggt ctccccggtt ctcatcatca tcctggcctc cccggtggcg
     1981 agcctgctgc tggcgttcaa taccttcgcc tgggccgggt ggatggtggt ggtatcgctg
     2041 ctctggtggg tcgggcggct gtacttctgg gagggcgtgg cggtattcgg ggccaatttt
     2101 gcgatgggcg ccgtggccct cccgctctgg cgcaagctgg ccccctacca gcagaaccgg
     2161 ctcctcacct tcctcaaccc cgaggtggac ccacagaagg cagggtatca cgccatccag
     2221 tcgaaggtgg ccatcggttc gggcgggtgg ttcggcaatg ggtacctcca ggggccccag
     2281 aagcggttgg ccttcctgcc cgagcagcac accgact
//
LOCUS       DATIFF010000098         1994 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1553525, whole genome shotgun sequence.
ACCESSION   DATIFF010000098 DATIFF010000000
VERSION     DATIFF010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1994)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1994)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1994
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1553525"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..358
                     /locus_tag="VLD58_01505"
     CDS             <1..358
                     /locus_tag="VLD58_01505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52995.1"
                     /translation="NPHVTIIGHPTGRLLLSRDPYGLDLDAVIEKAAATGVALEINAD
                     PHRLDLDWRVLRRVRERGAAVSIGADAHSVAGIENVAYGVGTARKGWLGPGEVLNALP
                     VEKFLAHVARRRAGWR"
     gene            349..1047
                     /gene="nth"
                     /locus_tag="VLD58_01510"
     CDS             349..1047
                     /gene="nth"
                     /locus_tag="VLD58_01510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HSB52996.1"
                     /translation="MAVKRGAAAARRRTGGTPARHTRDASQRAPEILTRLTAAYPDAH
                     CALEHRNAFELLCATILSAQCTDARVNLVTPALFERYPTPAALARAGQTDVQDIIKST
                     GFFRNKARSLIGMAQALVADHGGRVPRSMEKLRVLPGVGRKTANVILGNAYGINEGIT
                     VDTHVARLSRLLGLTRHADPVKIEQDLMPLFPRDHWALLSHLLIFHGRQVCIARRPRC
                     GECVLADLCPSSAV"
     gene            1381..>1994
                     /locus_tag="VLD58_01515"
     CDS             1381..>1994
                     /locus_tag="VLD58_01515"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB52997.1"
                     /translation="MAPQPFYEDRGTPIALRQVLLALGQLGYPADLLTYPIGRDVTSL
                     GLRIFRSGNPFRFQSVPIGFSLRKVVLDVPLSVALARRLRRERYWCMHAVEEAAFPAA
                     ILARRHGIPLLYDMQSSLAEQLCRLWPLGCPVARRTLDAAERWLLRRSTMVVTSAGLA
                     ERVRRVTPGVPVREWHFSGAPAEATPVAVEALRDRLDLRGQGPV"
BASE COUNT          282 a          708 c          674 g          330 t
ORIGIN      
        1 caacccccac gtcacgatca tcggccatcc caccggccga ctgctgctct cgcgcgatcc
       61 ctacggtctc gatctcgacg cggtcatcga gaaggcggcc gccaccggcg tcgcgctcga
      121 gatcaacgcg gacccgcacc ggctcgatct cgactggcgt gtgctccggc gcgtccggga
      181 gcgcggcgcg gccgtgtcca tcggagccga cgcgcacagc gtggcgggca tcgagaacgt
      241 cgcctacggc gtgggaaccg cgaggaaggg atggctcgga cccggcgagg tgctgaacgc
      301 gctgccggtg gagaaatttc tcgcacacgt ggcccggcgg agagccggat ggcggtgaaa
      361 cgcggcgcgg ccgccgcgcg acgcaggacg ggtggaaccc cggcgcggca cacccgtgac
      421 gcgagccagc gggcgccgga aattctcacg cggttgacgg cggcgtatcc cgacgcgcac
      481 tgcgccctcg agcaccggaa cgccttcgag ctgctctgcg cgacgattct ttccgcgcaa
      541 tgcacggacg cccgggtcaa cttggtcacg cccgccctct tcgagcggta tcccaccccc
      601 gcggcgctgg cccgcgccgg ccagaccgac gtgcaggaca tcatcaagtc caccggcttc
      661 ttccggaaca aggccaggag cctcatcggc atggcgcagg cgctcgtcgc cgatcatgga
      721 ggcagggtcc cgcgctccat ggagaagttg cgcgtgctcc ccggagtcgg ccggaagacc
      781 gccaatgtga tcctgggaaa cgcgtacgga atcaacgagg ggatcacggt ggacacgcac
      841 gtggcccggc tgagccggct gctcgggctg acccgccatg cggacccggt caagatcgag
      901 caggacctga tgcccctctt cccccgggac cactgggcgc tcctctctca cctcctgatc
      961 tttcacggcc gccaggtttg cattgcccgc cgcccgcgct gcggcgagtg cgtgctggcg
     1021 gacctctgcc catcctcggc ggtctgaccc atcccgctgg agccgcccag ccctttgggc
     1081 aaagaacttg cttcgagggg gtgccaatcc acgacacttt cacgttcccg gtctagattt
     1141 ccggagtccg gtctgcgccc ggcaggccgg ccggtggccg gtccgcccgg ttggatcgtt
     1201 ctaggtcctt gcgggtaagc aacttacgcg gtcagggagt agcgagtggc tcagcaccgc
     1261 gaatcgatgg gctcggggaa tgcgctacgg gactccacag tcttgtcgga tgttccggag
     1321 cgcgagcccg ggcaacgtac ggcggccgag gcagcccccc attcgcgccg actccttatc
     1381 gtggcgcccc agcctttcta tgaggaccgg ggcaccccca tagcgctccg gcaggtgctc
     1441 ctggccctgg ggcagctggg ctacccggcg gacctgctca cctaccccat cggtcgggac
     1501 gtcacctcgt tggggctgcg tatctttcgc tcgggcaatc ctttccggtt tcagtcggtg
     1561 cccatcgggt tctcgctccg caaggtcgta ctggatgttc cgctcagcgt tgcgctcgcg
     1621 cgtcgcctgc ggcgtgaacg ctactggtgc atgcacgcgg tggaggaggc cgcctttccg
     1681 gcggccatcc tggcccggcg tcacggcatc ccactcctct acgatatgca gtccagcctg
     1741 gccgagcagc tgtgccggct gtggccgctg ggctgcccag tggcgcggcg taccctcgat
     1801 gccgcggagc gctggctgct tcgccgttcg accatggtcg tgacgagcgc gggcctggcg
     1861 gagcgggttc gccgggtgac ccctggtgtg ccggtgcgcg aatggcactt ctccggcgct
     1921 cctgcggagg ccaccccggt agccgtcgaa gcgctccgcg atcggctcga cctccgtggc
     1981 caggggccgg tgat
//
LOCUS       DATIFF010000099         1160 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_784209, whole genome shotgun sequence.
ACCESSION   DATIFF010000099 DATIFF010000000
VERSION     DATIFF010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1160
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_784209"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1160)
                     /locus_tag="VLD58_01520"
     CDS             complement(<1..>1160)
                     /locus_tag="VLD58_01520"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB52998.1"
                     /translation="LANRLVVLKITPHEGREHLSLARLQHAHIVPLYCVQDLADRDLR
                     LLCMPYLGGTTLGRLLSELGEIPIARRTGRDLLSGLDRAQAEAPLSVPSQGPARQFLS
                     RASYVQAVCWIGACLADALQFAHQRELLHLDLKPSNVLLAADGTPMLLDFHLAQPPIR
                     PNESARHRLGGTPNYMPPEQWVAMMEICDGRSVTAAVDGRSDIYALGVMLYEMLGGAI
                     PFGFCPTLRMQFRRPPQVPVGLADIIAKCLAFDSRDRYPDAAQLAEDLRRHLADLPLR
                     GVPNRSLTERWQKWCRRRPHALGRATTAVACSAVILVAGLVAVGDARQRLRGAESLLA
                     ESRKHMDSHDYPAAVRALNRGLALVDQSWVLSINGYPSRSHDLRRDLRQQLD"
BASE COUNT          192 a          378 c          432 g          158 t
ORIGIN      
        1 ggtcgagctg ctgcctcagg tcccgccgga ggtcgtggga tcgggacgga taaccgttga
       61 tggacaggac ccaggactgg tcgaccaggg ccaggccgcg attcagggca cgcaccgccg
      121 cggggtaatc atggctgtcc atgtgcttgc gactttcggc cagcaaagac tcggccccgc
      181 ggaggcgctg ccgcgcgtcg ccgacggcga cgagccccgc caccaggatc acggccgagc
      241 aggccacggc ggtcgtcgcc cggcccagcg catggggacg gcgccggcac cacttctgcc
      301 aacgctcggt caagctgcgg ttggggacgc cgcggagcgg caggtcggcc agatgtcggc
      361 gcaaatcctc ggccagttgg gcggcgtcgg ggtaacggtc ccgtgagtcg aaggccaggc
      421 acttggcgat gatgtccgcc aatcctaccg ggacctgggg agggcggcgg aactgcatcc
      481 ggagcgtggg gcagaaaccg aacgggatcg cgccccccag catctcatac agcatgacgc
      541 ccagggcgta gatgtcggag cggccatcca cggcggccgt gacggaccgg ccgtcgcaga
      601 tctccatcat ggccacccac tgctcgggag gcatgtagtt gggagtcccg cccagccggt
      661 ggcgcgccga ctcgttcggc cggatcggcg gctgggccag gtggaagtcc aggagcatgg
      721 gcgtgccgtc ggccgccagt aggacgttcg agggcttcag gtccaggtgg agcagctcgc
      781 gttggtgcgc gaactgcaag gcgtcggcca ggcaggctcc gatccagcac accgcctgaa
      841 catacgaggc gcgggagagg aattgccggg cgggcccctg gctgggcacg gagagcggtg
      901 cctcggcttg ggcccggtcc agcccggaga gcaggtcccg gccggtccgc cgggcgatcg
      961 ggatctcgcc cagctcactc aagagccgcc ccagcgtggt cccgccgagg tagggcatgc
     1021 acagcaaccg caggtctcgg tcggcgagat cctgcacgca atacagcggc acgatatggg
     1081 catgctgcaa ccgcgcgagc gacaggtgct ctcggccttc gtggggcgtg atcttcagga
     1141 cgacgagccg gttggccaag
//
LOCUS       DATIFF010000100         2782 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1400220, whole genome shotgun sequence.
ACCESSION   DATIFF010000100 DATIFF010000000
VERSION     DATIFF010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2782
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1400220"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..350)
                     /locus_tag="VLD58_01525"
     CDS             complement(<1..350)
                     /locus_tag="VLD58_01525"
                     /inference="COORDINATES: protein motif:HMM:NF015662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB52999.1"
                     /translation="MKDFHATRLRERSAQARWILAVAFLVLAGAFFRTQILQFDRYRL
                     KAENNRLRPVPLQPARGTVYDRNGKVIAETVPGFSVALLAQSIDSLRQVLKRFSQIVP
                     LDSSQVEKSVNRFL"
     gene            complement(347..844)
                     /gene="mreD"
                     /locus_tag="VLD58_01530"
     CDS             complement(347..844)
                     /gene="mreD"
                     /locus_tag="VLD58_01530"
                     /inference="COORDINATES: protein motif:HMM:TIGR03426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HSB53000.1"
                     /translation="MIQIRADRSRLWVVLGLLAVLHFAVRPRLGSPQVAPDFLMLALL
                     LYAIRSRPGTAALAGFLVGLAGDAVAPSRIGAAALAHTVVGYLAAWGRAVFFPDNLFV
                     NGLVIAIGVWIRNAILLVASGSSGGGLTMALLVWSPLQAVTTALTAAMVLLLFQRWLD
                     IRLDA"
     gene            complement(841..1683)
                     /gene="mreC"
                     /locus_tag="VLD58_01535"
     CDS             complement(841..1683)
                     /gene="mreC"
                     /locus_tag="VLD58_01535"
                     /inference="COORDINATES: protein motif:HMM:NF016011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005618 - cell wall [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HSB53001.1"
                     /translation="MAPGSDRSLSRRDNALFVLCVALSVVMLVRPDWGNLVTGMVRQS
                     VLRPFLWMQQRAEESRTSRAAFERLRAERDSAAYAAQFLPSLRSENQRLRDLLGLGKR
                     LTIPYIPAEVLHQSLPTDGRTLILSAGEKQGVQPFDAVVSAEGLIGVVRFVEPERSLA
                     LTWAHPEFRASAFTQPGQVFGVIGPAVQITGSEQLLQLKGVAIRDSVPIGTLVTTSGL
                     GGVYPTGIPVGTVFGQATEETGWERIYLVRPAANPEEASQVLILRNPKNLPVGKAFSP
                     DSGQ"
     gene            complement(1684..2721)
                     /locus_tag="VLD58_01540"
     CDS             complement(1684..2721)
                     /locus_tag="VLD58_01540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HSB53002.1"
                     /translation="MKFPSLKLGSFLPANEIAVDLGTANTLIYVKGEGIVLNEPSVVA
                     IEKATGKIKGIGLEAKRMLGRTPDGILAVRPLKDGVIADFDVTEKMLRYFLKTIIDKH
                     VFRVRPKVIVCVPSGITEVERRAVRDSAETAGAKQVDMVAEPMAAAIGVGLPVETPTG
                     NMVIDIGGGTTEIAVIALSGIVSDTSIRVGGDELDQAIVQFMRKNYNLLVGEPTAEAI
                     KIKIGSAAPTGDEREMEVKGRDLVSGIPKTVRVHSSEIREAVQEPIQQIVDAVRRALE
                     ITPPELASDIVDRGIVMTGGGALIRGLDILLAQETGLPIHVDEDPLTCVVRGSGRILD
                     DYEKYQSVLYK"
BASE COUNT          487 a          936 c          921 g          438 t
ORIGIN      
        1 tcgaggaacc ggttgacgga cttttcgacc tgggaagaat ccagcggtac gatctgcgaa
       61 aagcgtttga gcacctggcg cagggaatcg atcgactgcg ccagcagcgc caccgagaac
      121 cccggcaccg tctcggcgat caccttgccg ttgcggtcgt acaccgtgcc gcgggccggc
      181 tggagcggga ccggacggag ccggttgttc tccgccttga gccggtagcg gtcgaactgg
      241 aggatctggg tccggaagaa cgcccccgcg agcaccagga acgcgacggc caggatccag
      301 cgggcctggg ccgaacgttc gcggagccgg gtggcgtgga agtctttcat gcgtcgagcc
      361 ggatatccag ccagcgctgg aacaggagca ggaccatcgc cgcggtgagc gcggtggtca
      421 ccgcctggag cggagaccag accagcaggg ccatcgtcag tcccccgcca ctcgacccgc
      481 tcgccaccag caggatggcg ttgcggatcc agacaccgat cgcgatcacc agtccattga
      541 cgaacagatt gtccgggaag aacaccgccc gtccccaggc cgcgagatat cccaccacgg
      601 tgtgagcgag cgccgcggcg ccgatccgcg agggggccac cgcatcgccc gcgagtccca
      661 ccaggaatcc ggccagcgcc gccgtccccg gccggctccg gatcgcgtag agcagcagcg
      721 ccagcatcag gaagtcgggc gcgacctggg gcgatcccag tcgcggacgc accgcgaagt
      781 gcagcacggc caggaggccg agcaccaccc agaggcggct ccggtcggcg cgaatctgga
      841 tcattggccc gaatccgggg agaaggcctt gcctaccggc aggttcttcg gattgcgcag
      901 aatgagcacc tggctcgcct cttcgggatt cgcggcgggc cgcaccaggt agatccgctc
      961 ccacccggtt tcctcggtcg cctgaccgaa caccgtgccc accggaatgc cggtcgggta
     1021 cacgccgccg agccccgagg tcgtaaccag ggtgccgatc ggcaccgagt cacggatcgc
     1081 cacacccttg agctggagca gttgctcgct gccggtgatc tggaccgcgg gcccgatcac
     1141 gccgaagacc tgccccggct gggtgaaggc gctggcgcgg aactcgggat gagcccaggt
     1201 gagcgccagg cttcgctccg gctcgacgaa gcgcaccacc ccgatgagcc cttcggccga
     1261 caccaccgcg tcgaacggct gcacaccctg cttctccccg gccgagagaa tgagcgtgcg
     1321 cccgtcggtc ggcagcgact gatgcagcac ctcggcgggg atgtagggga tcgtgagccg
     1381 cttaccgaga ccgagcaggt cacggagccg ctggttctcg gagcgaagcg aggggaggaa
     1441 ctgcgccgcg tacgccgccg agtcacgctc ggcgcggagc cgctcgaagg ccgcccggct
     1501 ggtgcgggac tcttcggctc gctgctgcat ccagaggaaa ggtcgaagca ccgactgccg
     1561 taccatgccg gtgaccaggt tgccccagtc gggccggacc agcatcacta ccgacaacgc
     1621 cacgcagagc acgaagaggg cgttgtcccg ccgcgagagc gaacggtctg acccgggggc
     1681 catttatttg tacaggacgc tctggtactt ctcgtaatcg tcgagaatcc ggccggagcc
     1741 gcgcaccacg caggtcagag ggtcttcgtc cacgtggatc ggcaggccgg tctcctgggc
     1801 cagcagaatg tcgaggcccc ggatcagggc accgccgccg gtcatcacga tgccccggtc
     1861 gacgatgtcg ctcgcgagct cgggcggcgt gatttccagc gcccgccgca ccgcgtcgac
     1921 gatctgctga atcggctcct gcaccgcttc gcggatctcg ctcgagtgca cccgcaccgt
     1981 cttcgggata cccgagacca gatcgcggcc cttcacttcc atctcccgct catcgccggt
     2041 cggcgccgcc gagccgatct tgatcttgat cgcttccgcg gtcggctcac ccacgaggag
     2101 gttgtagttc ttccgcatga actgcacgat cgcctggtcc agctcatcgc ccccgacccg
     2161 gatcgaggtg tcggacacga tgcctgacaa ggcgatcacc gcgatttcgg tggtgccgcc
     2221 gccgatgtcg atcaccatgt tgccggtggg cgtctcgacc ggaagcccca ccccgatcgc
     2281 cgcggccatc ggctcggcca ccatgtcgac ctgcttcgcg ccggcggtct cggccgagtc
     2341 ccgcaccgcg cggcgctcga cttcggtgat gccggagggc acgcacacga tgaccttggg
     2401 acgcacccgg aagacgtgtt tgtcgatgat ggtcttgagg aagtagcgga gcatcttctc
     2461 ggtgacatcg aagtcggcga tcacgccgtc cttgagcgga cgcaccgcga gaatgccatc
     2521 gggcgtgcgg cctaacatac gcttcgcttc gaggccgatg cctttgatct tgccggtggc
     2581 tttctcgatg gccacgacgg agggttcgtt cagcacgatg ccttcaccct tgacgtagat
     2641 cagggtgttg gccgtgccga ggtcgaccgc gatttcattc gcggggagaa acgacccgag
     2701 ttttagcgac gggaacttca tttctggggc caggagatcg aattgtggca aagctaaggg
     2761 tactggtaag atgggacaag ac
//
LOCUS       DATIFF010000101         3242 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_938678, whole genome shotgun sequence.
ACCESSION   DATIFF010000101 DATIFF010000000
VERSION     DATIFF010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3242
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_938678"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..522)
                     /gene="panC"
                     /locus_tag="VLD58_01545"
     CDS             complement(<1..522)
                     /gene="panC"
                     /locus_tag="VLD58_01545"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HSB53003.1"
                     /translation="MHEFTTIAELRAWLAEARLTGQRVGLVPTMGALHEGHLSLIDQA
                     RERADAVVLSVFVNPLQFGPREDFSRYPRDLRRDAGLATARKVDVLFAPAVDTMYSPE
                     SEIRVVPGPTADRLEGAVRPGHFAGVLTVVTKLFHLVEPDVAVFGQKDIQQATLIRQL
                     VRDLDFPIELVIAP"
     gene            complement(631..1440)
                     /gene="panB"
                     /locus_tag="VLD58_01550"
     CDS             complement(631..1440)
                     /gene="panB"
                     /locus_tag="VLD58_01550"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: protein motif:HMM:NF001452.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HSB53004.1"
                     /translation="MPDDLRPLTVTDLRERKRAGEKIAVLTCYDALFARLLDGTVEVL
                     LVGDSLNQVLAGKPNTLSATLDQMIYHAASVVRGTERSLVFVDLPFLSYQISVEDALR
                     NAGRVMQESGAHGVKLEGGEHMAETVRALVRIGIPVMGHLGLTPQAIHQLGGPKVQGR
                     DKAAADKLRSDARFLEDAGACAIVLELVPASLAEAVSKSISVPTIGIGAGPGCDGQVL
                     VLHDMLGLNEGFNPKFLKTYADLAATVRAAAGAFANDVRAGRYPTKEHSFE"
     gene            complement(1458..1901)
                     /gene="folK"
                     /locus_tag="VLD58_01555"
     CDS             complement(1458..1901)
                     /gene="folK"
                     /locus_tag="VLD58_01555"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: protein motif:HMM:NF013456.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HSB53005.1"
                     /translation="MNPRERVYVALGTNLGDREGYLARARAALGKLPLTTLIGASKVE
                     ETDPVGPSGQGKYLNQMVVVETSLDPGRFLKLLQKIEDENGRTRGEKWGPRTLDLDIV
                     RFGTRRLRDPDLRVPHPELPNRDWWQREIDELDAAFPAKVDSDDE"
     gene            complement(1898..>3242)
                     /locus_tag="VLD58_01560"
     CDS             complement(1898..>3242)
                     /locus_tag="VLD58_01560"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSB53006.1"
                     /translation="NVSLKDAFVQLEEMANRVLDWSDFRIYRIRDGGSTLVYRGALGW
                     PDRGDPPFDSGTLRNLAATTGEVVVVSDARNDDRVLAPTPDALSMMVLPLRFGSEVIG
                     TLELDHHKPHVYTKKEVTVASTFAGQLATAIHIADLRRPLVDTVDQVAAQVKLLAQTS
                     EQLRAAAGAVAQTANAIRGGAAEQEQLIAAGRESTASLAAQAREVASDGAAAALASTT
                     ASEVASQNRESIRDAIERLVQLQQFVATSSEQVGELYQVSNRLIGFISTIREIADLTN
                     LISLNAAIEAARAGHQGRGFAVVAEEVRQLAAQSGQASREAGGLVAAILGQVAQISEE
                     MDRGTDTVRGVEQLSADAARALEGIVAGTLDAGSHARRIAETAARQEQSAIRLSEQMS
                     QVAAVSTRTLEDANTTARRASEAARSHAELERALRELGGIAERLETIAKHFSHDL"
BASE COUNT          498 a         1091 c         1110 g          543 t
ORIGIN      
        1 cggcgcgatc accagctcga tcgggaagtc gagatcccgc accagctggc ggatcagggt
       61 ggcctgctgg atgtccttct gcccgaagac cgcgacgtcc ggctcgacca ggtggaagag
      121 cttggtgacc accgtgagca cgccggcaaa atggcctggc cgcaccgccc cttcgagccg
      181 gtcggcggtg ggaccgggaa ccacccggat ctcggactcg ggagagtaca tcgtgtccac
      241 cgccggcgcg aacaggacat ccaccttgcg cgcagttgcg agcccggcat cccgccggag
      301 atcgcggggg tagcgggaga agtcctccct gggcccgaac tggagcggat tgacgaagac
      361 gctcaacacc accgcatcgg cccgttcccg ggcctgatcg atcagggaga gatgtccttc
      421 gtgcagcgcg cccatcgtcg ggaccagacc gactcgttgc cccgtcagcc tcgcttcagc
      481 tagccacgcg cgaagctctg caatcgtcgt gaattcatgc atcggcaaat tcaccacaga
      541 ggcacagaga acagagagaa caacaggagg aaaacacttt cgccgttctc tgtgtcctct
      601 gtgtctctgt ggtaaagttg tgaaaaagcc tcactcgaaa ctgtgctcct tggtcggata
      661 ccgcccggcg cggacgtcgt tcgcgaaggc cccggcagcg gcccgcaccg tggcggccag
      721 gtcggcgtag gtcttgagga acttggggtt gaacccttcg ttgaggccga gcatgtcgtg
      781 cagcaccagc acctgtccgt cgcagccggg accggcgccg ataccgatgg tcgggacgct
      841 gatggacttg ctcaccgcct ccgccagcga ggccgggacc agttccagca cgatggcgca
      901 ggcgcccgca tcctcgagga acctggcgtc ggagcggagc ttgtcggccg cggccttgtc
      961 ccgtccctgc accttgggcc cgcccagctg gtggatcgcc tgcggcgtga ggccgaggtg
     1021 ccccatcacc gggatcccga tgcggacaag cgcccgcacg gtttcggcca tgtgctcgcc
     1081 accttcgagc ttcactccgt gggcgccgct ctcctgcatc acccgcccgg cattacggag
     1141 ggcgtcttcc accgagatct ggtaggagag aaatggaagg tccacgaaga ccagggaccg
     1201 ctccgtgccg cgcaccaccg aggcggcatg gtagatcatc tggtcgagcg tagcgctcag
     1261 ggtgttgggc ttcccggcca gcacctggtt gagcgagtcg cccaccagga gcacctccac
     1321 cgtcccgtca aggagccggg cgaagagcgc gtcgtaacag gtgaggaccg cgatcttctc
     1381 gccggcgcgc ttcctctcgc gcaggtcggt gacggtgagg ggtctcaaat cgtcaggcat
     1441 ggttccagtc ttgcggttta ttcgtcgtca gagtccacct tcgcggggaa ggcggcgtcc
     1501 agctcatcga tctcccgctg ccaccagtcc cggttcggga gctcgggatg gggcacccgg
     1561 agatcgggat cccgcagccg gcgcgtgccg aagcgtacaa tgtcgaggtc gagcgtgcgc
     1621 ggcccccact tctcgccccg ggtccggcca ttctcgtctt cgatcttctg gaggagcttg
     1681 agaaaacggc cggggtcgag ggaggtttcc accaccacca tctggttgag gtacttcccc
     1741 tgcccggatg gacccaccgg gtcggtttcc tcgaccttcg aggcgccgat cagggtcgtg
     1801 agcgggagct ttcccagcgc agcgcgggcc cgtgccaggt atccctcgcg gtcgcccagg
     1861 ttggtgccga gggcgacata gacccgctct cgcggattca tagatcgtgg gagaagtgct
     1921 tggcgatggt ctcgagccgc tcggcaatgc cgccgagctc acggagcgcc cgctccagct
     1981 cggcgtgact ccgcgcggct tcggaggcgc gccgggcggt ggtgttggcg tcttccaggg
     2041 tgcgggtcga caccgcggcg acctgcgaca tctgctcgct cagccggatg gccgactgtt
     2101 cctggcgggc cgcggtctcc gcgatgcgcc gggcatgaga tccggcgtcg agcgttccgg
     2161 ccacgattcc ctcgagggcg cgggccgcgt cggcggagag ctgttccacg ccgcggacgg
     2221 tgtcggtccc gcggtccatc tcttcagaga tctgggccac ctggccgaga atggccgcca
     2281 ccagcccgcc ggcttcgcgt gacgcctgcc cgctctgggc ggcgagttgc cgcacctctt
     2341 cggccacgac cgcgaaaccc cgcccctggt ggccggcccg ggccgcttcg atcgcggcgt
     2401 tgagcgagat gaggttggtc aggtcggcaa tctcgcggat ggtgctgatg aacccgatga
     2461 gccggttgga gacctggtag agctctccca cctgctccga gctggtggcc acgaactgct
     2521 ggagctgcac cagccgttcg atcgcgtcac ggatcgactc gcgattctgg gaggccacct
     2581 cgctggcggt ggtagaggcg agggccgcgg ccgccccgtc cgaggcgacc tcacgggcct
     2641 gcgccgcgag actggcggtg ctttcccggc cggcggcaat cagctgctcc tgttccgccg
     2701 ccccgccccg gatggcgttc gcggtctggg ccaccgcacc ggcggcggca cggagctgct
     2761 ccgaggtctg ggccaggagc ttcacctggg ccgcgacctg gtcgacggta tcgaccagcg
     2821 ggcggcgcag gtcggcaata tggatggcgg tcgcaagctg ccccgcgaag gtcgaggcga
     2881 ccgtgacttc cttcttggtg tagacgtggg gcttgtggtg atcgagctcg agggtgccga
     2941 tcacctcgct gccgaagcgg agcggcagca ccatcatgct cagcgcatcg ggggtgggtg
     3001 ccagcacccg gtcgtcgttc cgggcatcgg acaccaccac gacctcgccg gtcgtggccg
     3061 cgagattccg gagcgtcccg ctgtcgaacg gcgggtcacc ccgatcgggc cagcccagcg
     3121 ccccgcggta gaccagggtg gagccgccgt cacggatgcg gtagatccgg aagtcgctcc
     3181 agtcgagcac ccggttggcc atctcctcca gctgcacgaa ggcgtccttg agcgagacgt
     3241 tg
//
LOCUS       DATIFF010000102         1253 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_939111, whole genome shotgun sequence.
ACCESSION   DATIFF010000102 DATIFF010000000
VERSION     DATIFF010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_939111"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1253
                     /locus_tag="VLD58_01565"
     CDS             <1..>1253
                     /locus_tag="VLD58_01565"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSB53007.1"
                     /translation="VRYDGADRFDLVAGNGKPAALINVSRQPGGSMLAVQRAVLASAD
                     SIRALLPNGVRLELVYDQAALVRASLMSVAEAMLIGAALSALVLWLFLRRPGLAILAA
                     LSLPITVLVTFGGMALTGESLNLMSLGGLAVAIGLIIDDAVVVVENLQRRVAAHRGAP
                     LATVIVDAIDEIVAPVAGSTLTTIVVFAPLALVEGAVGQFFRSFSLALSIAVALSFLL
                     AVLLLPALASRPGWLAVDSEEGAPGGIGAMRAWFERVSARTITRPWWSGAIAVLLALT
                     ALGLWQVIGTGFLPDMDEGGFVLDYWTPTGTSLGETDRQLHAVERILREDPDVAAFTR
                     RTGSELGLFATAPNTGDLTVLLRPRGERKASVYQIMDRLRGRIESQVPAVRVEFTQVL
                     QDLLGDLAGAPSPVEVKLFHPDVRV"
BASE COUNT          160 a          419 c          442 g          232 t
ORIGIN      
        1 ggtccggtac gacggggctg atcgtttcga tctcgtggcg gggaatggca agcccgccgc
       61 gttgatcaac gtctcgcgcc agccaggcgg aagcatgctc gcggtacagc gggccgtcct
      121 ggcttcggcc gattcgatcc gggcgctgct gccaaacggg gtccggctcg agctggtcta
      181 cgatcaggcc gctctggtcc gtgcctcatt gatgagtgtc gccgaggcaa tgctcatcgg
      241 ggcagcgctg tcggcgctgg tgctgtggct gttcctccgg cggccggggc tcgccatcct
      301 ggcggcgctg tcgttaccga tcaccgtgct ggtgactttc ggcggcatgg cgctgaccgg
      361 tgagtcactc aacctgatgt cgctcggcgg actggctgtc gccatcgggc tcatcatcga
      421 tgatgccgtg gtggtggtgg agaacctgca gcgccgggtg gccgcccaca ggggtgcccc
      481 gcttgccacg gtaatcgtcg acgcgatcga cgagatcgtc gctcccgtgg ccgggtcgac
      541 cctcaccacg atcgtggtct ttgccccgct cgcgctggtg gaaggcgccg tcggccagtt
      601 cttccggtcc ttctccctgg cgttgagtat cgccgtcgcc ctctccttcc tgctggcggt
      661 gctgctgctc ccggcgctgg cctcacgacc gggctggctg gcggtcgatt ccgaggaggg
      721 cgcacccgga gggatcggcg ccatgcgcgc ctggttcgag cgagtcagcg cgaggaccat
      781 cacccggcca tggtggagcg gcgcgatcgc ggtcctgctg gccctcacgg ccctgggcct
      841 ctggcaggtg atcgggaccg gcttcctccc cgacatggac gaagggggat tcgtcctcga
      901 ctactggacc cccaccggga catcgctcgg cgaaactgac cgtcagcttc acgcggtcga
      961 acggatcctg cgggaagacc ccgacgtggc ggcgttcacc cggcggaccg gatcggagct
     1021 cggcctcttc gcgaccgcgc ccaataccgg cgacctcacc gtgctgctgc gcccgcgagg
     1081 cgagcggaag gcgagcgtct accagatcat ggaccggctg cggggccgga tcgaatccca
     1141 ggtgcccgcg gtccgggtcg agttcaccca ggtgctccag gatctcctgg gcgacctggc
     1201 cggggcgccg agtcctgtcg aggtgaagtt gtttcatcct gatgtgcggg tcg
//
LOCUS       DATIFF010000103         1092 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_477620, whole genome shotgun sequence.
ACCESSION   DATIFF010000103 DATIFF010000000
VERSION     DATIFF010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_477620"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..261)
                     /locus_tag="VLD58_01570"
     CDS             complement(<1..261)
                     /locus_tag="VLD58_01570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53008.1"
                     /translation="MRPAVVELSGLDPTTIVALVRHASGLGLEVLTGDDWAILGGSAA
                     RLSALARPWVVPEALSELANLVGRVLPTETPTVWMTASGPIQV"
     gene            complement(360..>1092)
                     /locus_tag="VLD58_01575"
     CDS             complement(360..>1092)
                     /locus_tag="VLD58_01575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cell division protein FtsH"
                     /protein_id="HSB53009.1"
                     /translation="GVERKSLVLSEDERRLTAYHEAGHTVVSMKTPGSDPIHKVTIVP
                     RGRALGLMMSLPEKDRYGQTKEWLIGRLAIAFGGRVAEELIFGPSKVTTGAGSDIEQA
                     TAIARRMVTQFGMSDKIGMMAVGDREQEIFLGREFGQRREVSERTAEIVDDEVKRFID
                     EAHEKARKLLNDNRELLERIATALLERETIDREDIDFLAAGKALPPMSSSPPPTSPAS
                     SQPRQDSLPQRAPILGVPPAEPMGA"
BASE COUNT          160 a          377 c          386 g          169 t
ORIGIN      
        1 gacctgaatc ggtcccgagg cggtcatcca gacggtggga gtctcggtgg ggagcacccg
       61 gccaaccagg ttggccagct cggagagcgc ctcggggact acccacgggc gggccagggc
      121 gctcaggcgg gcggcggagc cacccaggat cgcccagtcg tcgcccgtga gcacctcgag
      181 cccaagcccg gaggcgtgac ggaccagcgc aacgatggtg gtgggatcga gcccggagag
      241 ctccacaacg gcaggccgca tcccggagga tgcggcctcg gccttgacct catcccaacc
      301 ccgggccgcc aaagcgtcgc gaacggcccg gggagaatgg ccggcgaggg cccgggcgat
      361 cacgcgccca tgggttcggc cggcggtacc ccgaggatgg gtgcgcgctg cggcagcgag
      421 tcctgccgtg gctggctaga cgcgggagaa gtcggcggtg gcgaggacga catcggaggc
      481 agcgccttgc ccgcggccag gaaatcgatg tcttcccggt cgatggtctc ccgctcgaga
      541 agtgcggtgg caatccgctc gagcagttcc cggttgtcgt tcaggagctt ccgggccttc
      601 tcgtgggcct cgtcgatgaa ccgcttcacc tcgtcatcga cgatctcggc ggtgcgctcc
      661 gacacctcgc gccgctggcc gaactcccgg cccaggaaga tctcctgttc ccggtcgccg
      721 acggccatca tcccgatctt gtcgctcatg ccgaactggg tcaccatccg gcgggcaatc
      781 gcggtggcct gctcgatatc gctgccggcg ccggtggtca ccttgctcgg gccgaagatc
      841 agctcctccg ccacccggcc gccgaaggcg atcgcgagcc ggccgatgag ccattccttg
      901 gtctggccgt accggtcctt ctcggggagc gacatcatga gcccgagcgc acggccgcgg
      961 ggcacgatgg tgaccttgtg gatcggatcg ctgcccggcg tcttcatgct gacgacggtg
     1021 tggccggcct cgtggtaggc ggtgaggcgg cgctcgtctt ccgagagcac caggctcttc
     1081 cgctccacgc cc
//
LOCUS       DATIFF010000104         1335 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1247208, whole genome shotgun sequence.
ACCESSION   DATIFF010000104 DATIFF010000000
VERSION     DATIFF010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1335
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1247208"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..755)
                     /locus_tag="VLD58_01580"
     CDS             complement(<1..755)
                     /locus_tag="VLD58_01580"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSB53010.1"
                     /translation="MRIFIAGATGVVGRRLIPMARAAGHMVTAVGRTPEKRALLGRLG
                     ANAAPVDLVDPVSIGRAVAGHEAVINLATHIPRSSARMMLPGAWRENDRLRGISSGLL
                     AEAATTAGAERLIQESFALTYADQGTSWVTEESPLQPVRYNRTVLDAETAAARFARNG
                     GIGIVLRFAAFYGPNDPLFTEVIQSIRWGRLPYPGAPEAFISFVSHEDAATATLAALT
                     LPSGVYNVVDDEPLSRHDAGVTLAGLLGVRPPRP"
     gene            1022..>1335
                     /locus_tag="VLD58_01585"
     CDS             1022..>1335
                     /locus_tag="VLD58_01585"
                     /inference="COORDINATES: protein motif:HMM:NF016430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor"
                     /protein_id="HSB53011.1"
                     /translation="MLGTVEDAEDLVQKAWLRWQGADPAAIRSPEAWLVAGVSRLSID
                     RLRRTGVEREVYQGRWLPEPIATDARSTPEYQAELASDLSIAFLVLLERLGSEERPAF
                     LLR"
BASE COUNT          202 a          473 c          453 g          207 t
ORIGIN      
        1 ggccgtggcg ggcggacgcc gaggaggccc gccagcgtga cgcccgcgtc gtgccgcgag
       61 agtggctcat catccaccac gttgtacacc cccgaaggca gggtgagcgc cgccagagtc
      121 gccgttgccg catcctcatg cgaaacgaac gagatgaagg cctccggggc gcccggatac
      181 ggcaaccggc cccagcgtat actctggatc acctcggtga agagcgggtc gttcgggccg
      241 taaaaggccg cgaaacggag tacgatcccg atcccgccgt tccgcgcaaa gcgcgccgct
      301 gcggtctcgg catccaggac ggtccggttg tagcggaccg gctggagggg tgattcctcg
      361 gtgacccaac tggtcccctg gtcggcatag gtcagggcga acgactcctg gatcaaccgc
      421 tccgcgccgg cagtcgtcgc ggcctcggcc aggagtccgg agctgatgcc acggaggcgg
      481 tcgttttccc gccaggcgcc cggcagcatc atccttgcac tggagcgggg gatgtgagtg
      541 gcgaggttta tgaccgcctc gtggcccgcc acggcccgcc cgatcgacac cggatcgacg
      601 aggtccacgg gtgcggcatt cgcccccagg cgccccagca gggcccgctt ctccggggtg
      661 cgcccgacag cggtcaccat gtgcccggcg gcacgcgcca tcggaatgag acgccggccg
      721 accacaccgg ttgctcccgc aatgaagatc cgcatgatgg ctcctccatt agttgtcgct
      781 cggagcgcca ggccgtccgg ggcagcattc gggcctcggc tccgctgcgt ggcgcctccg
      841 ccgtacgctg ggtccagctt caagacgagc gaggccggcg agtgtgacac ccgaggccgc
      901 gtccctcccg ctgtcacaac cgggggcttc gcccgtctat cttcgcagag atgcgtgact
      961 cgaccgacct caccgccacc ttcgaacgtc accggaccgc cttttcggga tcgcctaccg
     1021 gatgcttggc acggtggagg atgccgagga cctggtgcag aaggcctggc tccgctggca
     1081 aggcgctgac ccggccgcga tccgctcgcc ggaggcctgg ctggtggccg gcgtgagccg
     1141 tctctccatc gaccggctgc gccgtaccgg agtggaacgc gaggtctacc agggccgctg
     1201 gctgccggag cccattgcca ccgacgctcg ctcgaccccg gagtaccagg ccgagctcgc
     1261 ctcggatctc tcaatcgcct tccttgtcct gctggagcga ctgggatccg aggagcgacc
     1321 ggcgttcctg ctgcg
//
LOCUS       DATIFF010000105         3498 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1247409, whole genome shotgun sequence.
ACCESSION   DATIFF010000105 DATIFF010000000
VERSION     DATIFF010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3498
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1247409"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..569)
                     /locus_tag="VLD58_01590"
     CDS             complement(<1..569)
                     /locus_tag="VLD58_01590"
                     /inference="COORDINATES: protein motif:HMM:NF013703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HSB53012.1"
                     /translation="MAPHLEAPTAARLRDAGQSPVTWPTREEFAALFRLALPVVAVQV
                     SLMFMGVVDTMMVGRLSAAALGSVALGNLFFFTVVVIGMGTLMALDSLAAQAIGARDE
                     VGLARALQRTLVIATVLTIPSMLGLALVRPFLAVTGQPAELVAGTSSYIYVIIPGVFP
                     FLVFIVLRQTLQALHHTGPIVWIAIGANIL"
     gene            complement(612..686)
                     /locus_tag="VLD58_01595"
     tRNA            complement(612..686)
                     /locus_tag="VLD58_01595"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(649..651),aa:Arg,seq:tct)
     gene            718..1557
                     /locus_tag="VLD58_01600"
     CDS             718..1557
                     /locus_tag="VLD58_01600"
                     /inference="COORDINATES: protein motif:HMM:NF014724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HSB53013.1"
                     /translation="MAAAERPARSRIIGLGSGLCLGVATWILAKELGVASLLGRGTMG
                     STGWAAAAGALLGLAGLTAILWGLLGVSVATLLLVAWTPVVEGPVHRMIRRDAPGPQP
                     LDAILVLSGNVTGDGFLGSAALDRLVAGISQAKERGVRHLIISRVYVTMGRDTISSEA
                     DEMRLARRFASDLDVHSLGTVRTTREEALAVASMARREGWKRLGVVTSPMHSRRACAA
                     VEEAGLAVICLPAAERAYAVQRISTPGNRVRAFQDWLYEAVAMRVYRWRGWVGPEVQE
                     GEH"
     gene            1736..2215
                     /locus_tag="VLD58_01605"
     CDS             1736..2215
                     /locus_tag="VLD58_01605"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HSB53014.1"
                     /translation="MPSQLRRPGRDGFSLVEMLIVIVLIGLMMLWAVPRAGSMLDHAQ
                     VRAARTAIANEFTVARNAARTSNRVAVLRLTGNLMLIEMNALSGTAKDTLAGAGGGKF
                     LPLDVKYGVDVSGGADTLRIDPRGILTSALGTAVTYVVSRRGWRDSVVINSYGRITR"
     gene            2212..2580
                     /locus_tag="VLD58_01610"
     CDS             2212..2580
                     /locus_tag="VLD58_01610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HSB53015.1"
                     /translation="MTGRRGGFTIVEVLMAIILLGIGMLVLAGGAGGVTRMMSQGSRK
                     TRAYSAASSIVDSLRSIAASDCASLPASGSSTYPGGISRAWTVSATGSTATTHTIVVT
                     TSYRAGTRLLGDTLYAFVYC"
     gene            2588..3445
                     /locus_tag="VLD58_01615"
     CDS             2588..3445
                     /locus_tag="VLD58_01615"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HSB53016.1"
                     /translation="MRDNRRGFTLVELLVALIMMVLVGGALYNMLLTVQRVSGRQTEV
                     AGMNSNLRSGVQLIQNELSELGNNLTGTSGAVNDIVSFNSTSITYNALRGMGETCDLV
                     STTLVKVRQDSYSGVRIPSTRERLWLYFDKDSTATSDDRWETSAISSVASSVCADGTT
                     PAWSLGVNFTSVTDAGTWYPIPVRTYERMVMGQVTDNGQNWLGIRSIDAGESALIPVI
                     GPLASTGLNILYRDKDNNAAGSATDIKYIMFTLYGITDRTVSASGFNGAVGSVNDSLK
                     VLVQLRNAK"
BASE COUNT          580 a         1123 c         1259 g          536 t
ORIGIN      
        1 agaatgttgg cgccgatcgc gatccagacg atcgggcccg tgtggtggag cgcctggagc
       61 gtctgccgga gcacgatgaa gacgaggaac gggaagacgc ccggaatgat cacgtagatg
      121 tagctcgagg tgccggcgac cagctccgcc ggctgcccgg tgaccgccag gaaggggcgc
      181 accagggcca ggcccagcat ggaggggatg gtcagcacgg tggcgatgac cagcgtgcgc
      241 tggagcgccc gcgcgagacc gacctcgtcc cgggcgccga tcgcctgcgc cgccagcgag
      301 tcgagcgcca tcagcgtgcc catgccgatg accaccacgg tgaagaagaa gaggtttccg
      361 agcgccaccg agccgagggc cgcggcggag agccgcccca ccatcatggt gtccaccaca
      421 cccatgaaca tcaggctcac ctggacggca accaccggca gcgcgagccg gaagagggcg
      481 gcgaactcct cgcgggtggg ccaggtcacc ggggactggc ccgcatcgcg gagccgggcc
      541 gccgtcgggg cctccaggtg cggcgccact gggtgagggc catggagtgc gtagattcgg
      601 tgaaggcggg atgcgcccgg tgcgattcga acgcacgacc cacagcttag aaggctgttg
      661 ctctatccag gctgagctac gggcgcgggt tgcgcaaaga tacaagggga ggcagggatg
      721 gcggcagcgg agcggccggc gcgatcacgg atcatcgggc tcgggagcgg gctctgcctc
      781 ggcgtggcca cctggattct ggccaaggag ctcggtgtgg ccagcctcct gggtcggggc
      841 acgatgggct cgaccgggtg ggcggccgcg gcgggagccc tcctcgggct cgccggactc
      901 accgccatcc tctggggcct ccttggagtc tccgtggcca ccctgctcct ggtggcgtgg
      961 acgccggtgg tggaggggcc ggtccaccgc atgatccgcc gcgatgcccc ggggcctcag
     1021 cccctcgatg ccattctcgt cctctccggc aacgtcaccg gcgacggctt cctcggcagc
     1081 gccgccctcg accgcctggt ggcggggatc tcccaggcga aagagcgcgg ggtccgccac
     1141 ctgatcatct ccagggtgta cgtcaccatg ggccgggaca ccatctcctc ggaggccgac
     1201 gagatgcggc tggcccggcg gttcgcttcc gatctcgatg tccactcact gggaacggtc
     1261 cggaccacgc gggaggaggc gctcgcggtg gcaagcatgg cccgccgtga gggatggaag
     1321 cggctcggcg tggtgacctc cccgatgcac tcgcgccgcg cctgcgcggc ggttgaggag
     1381 gcgggtcttg ccgtcatctg cctccccgcg gcggaacggg cctatgcggt tcagcgcatc
     1441 agcacgccgg gcaaccgggt gcgggcattc caggactggc tctacgaggc cgtggccatg
     1501 cgggtctatc ggtggcgagg gtgggtcgga ccggaagtgc aagaagggga gcactgaccg
     1561 cattccagag ggtgtggtgg cgaaacgccg agaggacacc actgttcggt tttcgcacac
     1621 ccatttcccg cagccggggg agtggttatc tcaagggggg caatgggttg cggaaggaga
     1681 gtcgggcggc ggagggagtc cggcaatggc ccaaagcgtg cagacccatc taattatgcc
     1741 aagccaactt cgacgaccgg ggcgagacgg cttctcgctg gtcgagatgt tgatcgtgat
     1801 cgtgctgatc gggctgatga tgctctgggc ggttccccgg gccggctcga tgctcgacca
     1861 tgcccaggtg cgggcggccc gcaccgccat cgcgaacgag ttcaccgtgg cgcggaacgc
     1921 ggcccgaacg tcgaaccggg tggcggttct gcggctgacg ggaaacctca tgctgatcga
     1981 gatgaacgcc ctctcgggca cggccaagga caccctcgcg ggcgcggggg gcggcaagtt
     2041 cctgccgctc gatgtcaagt acggcgtcga cgtgagcggt ggggcggata cgctgcgaat
     2101 cgatccccgc gggattctga cttccgcgct cggcaccgcg gtgacctacg tggtttcccg
     2161 ccgcggatgg cgcgactcgg tcgtgatcaa cagctatggg aggattacgc gatgaccggc
     2221 cggcgtggcg gcttcacgat cgtggaggtc ctgatggcca tcatcctcct cggcatcggg
     2281 atgctggtcc tggcgggcgg ggcgggcggt gtgacgcgga tgatgtccca gggctcgcgg
     2341 aagacccgcg cctactcggc ggcctcgtcc atcgtggaca gcctccggag catcgcggcg
     2401 agcgattgcg cgtcgctgcc ggcgagcggc tcgagcacct accccggtgg gatcagccgg
     2461 gcgtggacgg tgagcgccac cggcagcacc gctacgacac acacgatcgt ggttaccacg
     2521 tcgtaccggg ccggcacccg cctgctgggc gacacgctct acgcctttgt gtactgctga
     2581 gggcgccatg cgcgacaacc gacgcggctt caccctggtc gagctcctcg tcgccctgat
     2641 catgatggtc ctggtcgggg gggcgctcta caacatgctc ctcaccgtcc agcgggtctc
     2701 tgggcggcag accgaggtcg cggggatgaa ctcgaacctg cggtccggcg tgcagctgat
     2761 ccagaacgag ctgtcggagc tggggaacaa cctgaccggg acgtcgggcg cggtgaacga
     2821 catcgtgagc ttcaactcga cctcgatcac ctacaacgcg ctccggggca tgggcgagac
     2881 ctgcgacctg gtcagcacca cgctcgtcaa ggtccgtcag gacagctact ccggagtccg
     2941 gattccgtcg acgcgcgagc ggctctggct ctatttcgac aaggacagca ccgcgacgag
     3001 cgacgaccgc tgggagacat cggccatcag cagcgtggcg tcctcggtct gcgcggacgg
     3061 aaccacgccc gcctggagcc tcggcgtgaa cttcacctcg gtgaccgacg ccggcacctg
     3121 gtacccgatt ccggtccgga cctacgaacg gatggtgatg ggccaggtca ccgacaacgg
     3181 gcagaactgg ctggggatcc ggtccatcga cgccggcgag agcgcgctga ttccggtcat
     3241 cgggccgctc gcctcgaccg ggctcaacat cctgtaccgg gacaaggaca acaacgcggc
     3301 gggcagcgcg acggacatca agtacatcat gttcacgctc tacgggatta ccgatcgcac
     3361 cgtgagcgcg agcggcttca acggcgccgt ggggtcggtg aacgactccc tgaaggtgct
     3421 ggtccagctg cggaacgcca aataggacaa ttgcgaggag gtttcatggc gggtcatcga
     3481 ggcactcatc tccggttt
//
LOCUS       DATIFF010000106         3072 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_631637, whole genome shotgun sequence.
ACCESSION   DATIFF010000106 DATIFF010000000
VERSION     DATIFF010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3072
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_631637"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..746)
                     /locus_tag="VLD58_01620"
     CDS             complement(<1..746)
                     /locus_tag="VLD58_01620"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HSB53017.1"
                     /translation="MIQTSALPDSAEPSASTFISFGRHAVLGGVDLIRARFVNHASQG
                     HAHSDYEIGMIGMGQRLVRCRGREYHASAGSIVVFAPGEVHSGAPLDQQGSTYQSFLV
                     SAGTLGAAPWFSEPVIQDPALAERLAAVHRELEERGWSTESEEELRSALAQLVERHGI
                     PGDMVTVGQEPLAVREVRLHLEANYASLIRLEPLARQVGLSVFQLIRLFRAETGLPPY
                     AYLEQIRIDRAVGMLRAGVPISEVADRTGFS"
     gene            882..>3072
                     /locus_tag="VLD58_01625"
     CDS             882..>3072
                     /locus_tag="VLD58_01625"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSB53018.1"
                     /translation="MTIATLRRGPSAVLLLALLAASTAAVPAPARAPDPGDFTIEKLA
                     EGVYAAIRHEPPSLYFESNSVFIVGDSGVAVVDAQFSLASTRATLAALRRITGKPVRY
                     VINTHGHDDHITGNQVYRDSFPGVEFIAHRSTRDAMVADGAKKRKEFLANLPPTIGFF
                     RQMLVDGKGPDGAPIAPEERAGFASDSSIGSRFIAESAELELVPATRVVDDRLTLKLG
                     ARTIEVMHLGRGHSDGDLVVWLPAERTVASGDLVVAPVPLVGSTSHPAEFLVALDRLR
                     SLKPAVIVPGHGPAMHDLSHVDNVIQLLVSIREQVQQSVWQGHTLAAVKRKVDLSRFR
                     RLFAGDSRLQQFAFDNYVADPAVTAAFADATPAIRPGGPVVTANRAAPPSRTPLARGV
                     LAITGVTLIPMTSEQVVENATVVVRDGRITAVGPRAGIKVPAGARIIDGRGKYLIPGL
                     ADMHAHLFSDSDAPDSVGPYELGAMVANGITATRLMMGTPAQLVLRRDVMAGTIVGPQ
                     LWLASPEFAGRRYGDFKGYAVPNADSARAAVRRAVADGYDFLKITLFVGREAFDALTE
                     EADKAGIPAVGHVDPAVGVPHALARGQHIEHLDNYVEQLLADTAPMRSSVSDRGVYRP
                     ENWASLAYIDDGKLSRLAGLTARSGTYTTPTLTIFKNAFGLGIADSMVRSWPDWRMYP
                     AATRELYGRARDQYWSHPAPDSLRLRWVTTRNQLVRAIADSGGRIMAG"
BASE COUNT          481 a         1096 c         1002 g          493 t
ORIGIN      
        1 gagaacccgg tacggtccgc cacttcggag atcggcaccc cagcccggag cattcccacc
       61 gcccgatcaa tccggatctg ctccaggtag gcgtagggcg gaagcccggt ttctgcccgg
      121 aacaggcgga tcagctggaa gacgctgagc cccacctgtc gtgccagcgg ctccagccga
      181 ataagcgagg catagttggc ctcgaggtga agcctgacct cccggaccgc caggggttcc
      241 tggcccacag tcaccatatc tccgggaatg ccgtggcgtt ccaccagttg agccagcgcg
      301 ctccgcagct cctcctcgct ttcagtgctc cagccacgct cctccagctc ccgatgcacc
      361 gcggcaagcc gctcggcgag cgccggatcc tggatcaccg gctcggaaaa ccacggcgcc
      421 gcaccgaggg tgccggccga gaccaggaac gactggtagg tggatccctg ctggtcgagt
      481 ggggcgccgc tatgcacctc tcccggcgcg aataccacga tcgatccggc cgaggcgtga
      541 tactcccggc cgcggcagcg caccagccgc tgccccatgc cgatcatccc gatctcgtag
      601 tcggagtgtg cgtgaccctg gctcgcgtga ttgacgaagc gggcccggat gaggtcgacg
      661 ccgcccagca cggcgtggcg gccgaatgag atgaaagtgc tggccgaagg ttcggcggaa
      721 tcgggcaggg cggaggtctg aatcatgttg cacctacggc ggaagcaggg ctccaggttt
      781 ccgtcgctgg cgaaacgagg cctcgagccg ctccgtacag cggccaaccc tgctgcgact
      841 cccggtatct cccgcaggat cgtccaagcc ggagcttcct cgtgaccatc gccactctgc
      901 gccgcggtcc ttccgcggtt cttctgctcg ccctgctcgc cgcctcgacg gctgccgtcc
      961 cggcccccgc gcgggcgccc gatccgggtg atttcacgat cgagaagctg gccgaggggg
     1021 tctacgcggc gatccggcat gagccgccca gcctctactt cgaatcgaac agcgtcttca
     1081 tcgtgggcga cagcggcgtg gccgtggtcg acgcgcagtt ctccctggcc tccacccgcg
     1141 ccacgctcgc ggcgctgcgg cgcatcaccg gcaagccggt ccgctacgtc atcaacaccc
     1201 acggtcacga cgatcacatc accggtaacc aggtctatcg cgacagcttt cccggtgtgg
     1261 agttcatcgc ccaccggagc acccgggatg cgatggttgc ggacggggcg aagaagcgga
     1321 aggagtttct ggcgaacctc cctccgacca tcgggttctt ccgtcagatg ctggtcgacg
     1381 ggaagggccc cgacggcgcc ccgatagctc ccgaggagcg ggccggcttc gcgagcgatt
     1441 cgagtatcgg tagccggttc atcgccgaat cggccgagct cgaactcgtc cccgccaccc
     1501 gtgtcgtgga cgaccggctc accctgaagc tcggcgcccg caccatcgag gtgatgcacc
     1561 tgggccgcgg ccacagcgat ggcgatctgg tggtgtggct tcctgccgag aggaccgtgg
     1621 cctccggcga cctcgtcgtg gcgccggtgc cgctggtggg ctccacctcg catcccgccg
     1681 aattcctcgt ggcgctcgac cggctgcggt cgctcaagcc cgcggtgatc gtacccggcc
     1741 acggcccggc gatgcatgac ctgtcccacg tcgacaacgt catccagctg ctggtctcga
     1801 tccgggaaca ggtgcagcag tcagtctggc agggccatac cctggccgcg gtgaagcgga
     1861 aggtggatct ctcccgtttc cgccgcctct tcgccggcga ctcgcggctc cagcagtttg
     1921 ccttcgacaa ctacgtggcc gatcccgccg tcaccgccgc cttcgccgac gcaacaccgg
     1981 ctattcgtcc cggcggcccg gtagtgacgg ccaaccgcgc tgcgccaccc tcgcgcactc
     2041 cgctcgcgcg cggcgtgctg gcgatcaccg gcgtcaccct gatccccatg acctccgagc
     2101 aggttgtcga gaacgccacc gtcgtggtgc gggacgggcg tatcacggct gttggccccc
     2161 gagccggcat caaggtgccg gcgggcgcgc ggatcatcga cggaaggggg aaatacctga
     2221 tcccgggcct ggccgacatg cacgcccacc tcttctccga cagcgacgct cccgactcgg
     2281 tcggccccta cgaactcggc gccatggtcg ccaacggcat cacggcgact cggctcatga
     2341 tgggaactcc ggcgcagctg gtgctccgcc gcgacgtgat ggccgggacg atcgtgggtc
     2401 cccagctctg gctggcgagc ccggagttcg cgggccgccg ctatggcgat ttcaagggct
     2461 acgcggtgcc caatgccgac agcgcccggg cggcggtgcg gcgggccgtg gccgacgggt
     2521 acgacttcct gaagatcacg ctctttgtcg gacgggaagc cttcgatgcc ctgaccgagg
     2581 aggcggacaa ggcggggatc ccggcggtgg gccacgtcga tccggcagtc ggggtgccac
     2641 atgcgctggc gcggggacag cacatcgagc acctcgacaa ctatgtcgaa cagctgctcg
     2701 ccgacaccgc gccgatgcgg agctccgtct cggaccgggg agtgtatcgc ccggagaact
     2761 gggccagtct cgcctatatc gatgacggga agctctcgcg actcgcgggg ctcacggccc
     2821 gatccggcac ctacaccacg cccacgctca ccatcttcaa gaatgccttc ggactcggca
     2881 tcgcggacag catggtgcgg agctggcccg attggcggat gtatcctgct gccacccgcg
     2941 agctctatgg ccgcgcccgg gaccagtact ggtcccatcc cgcgcccgat tcgttacggc
     3001 ttcgctgggt gaccacccgc aaccagctgg tgcgggcgat cgccgattca ggcgggcgca
     3061 tcatggctgg gt
//
LOCUS       DATIFF010000107         1243 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2170639, whole genome shotgun sequence.
ACCESSION   DATIFF010000107 DATIFF010000000
VERSION     DATIFF010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1243
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2170639"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1243
                     /locus_tag="VLD58_01630"
     CDS             <1..>1243
                     /locus_tag="VLD58_01630"
                     /inference="COORDINATES: protein motif:HMM:NF012931.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HSB53019.1"
                     /translation="TLAAALVAAPALLAAQAPTALMPMPAELTLGSGRLRLDSTFTTV
                     IAGHTDARLERGIQRALTRLAARIGQPVPTRVDSADQGLVIRVKGPGQSVQTPDEDES
                     YRLSVTPTRAELSAPTVVGALRGLETLLQLISTDSAGFYLPEASINDQPRFKWRGLNV
                     DACRHFMPPEMIRRTLDGMAMVKLNVLHWHLSDDQGFRVESHRYPKLHQLGSDGLYYT
                     QDEIREIVAYARDRGIRVVPEFDMPGHATSWFVGYPQYASAPGPYQIERRFGVFDPTF
                     DPTREATYQFIEGFVSEMVTLFPDPYWHIGGDEVSPRQWNQSPAIKRFRREHSLKDNN
                     ELQAYFNRRLFAILDRHHRRPVGWDEILHPDLPKGAVIQSWRGTEYLGRAASQGNAGI
                     LSAPYYLDHQESAEYHYLADPL"
BASE COUNT          210 a          469 c          374 g          190 t
ORIGIN      
        1 accctcgccg ccgcgctggt tgctgccccg gccctgctcg ccgcccaggc gccaaccgcc
       61 ctgatgccga tgcccgccga gctgacactc ggcagcggcc ggctgcgtct cgactcgacc
      121 ttcaccaccg tgatagcggg gcataccgac gcacggctcg aacggggtat ccagcgggcc
      181 ctcacgcggc tggccgcacg gatcgggcag ccggtcccca cccgagtgga cagcgcggac
      241 cagggcctgg tgatccgggt gaaaggaccg ggccagtcgg tgcagacgcc ggacgaggat
      301 gagtcgtatc gcctgagcgt gacacccacc cgggccgagc tgtcggcgcc gaccgtggtc
      361 ggcgcgctac ggggcctcga gactttgctc cagctcatca gcaccgacag cgcgggcttc
      421 tatctccccg aagccagcat caacgatcag ccccggttca agtggcgcgg cctcaacgtg
      481 gatgcctgcc gtcatttcat gccgccagag atgatccgcc ggaccctcga cggcatggcg
      541 atggtgaagc tcaacgtgct gcactggcat ctctcggacg accagggctt ccgggtcgaa
      601 agccaccgct accccaagct ccaccagctc gggtccgatg ggctctacta cactcaggac
      661 gagatcaggg agatcgtcgc ctacgcccgc gaccgcggca tccgggtggt ccccgagttc
      721 gacatgccgg gccacgccac cagctggttc gtgggctacc cgcagtacgc cagcgcccct
      781 ggcccctatc agatcgagcg ccgcttcggc gtcttcgacc cgaccttcga tcccacccgc
      841 gaggcgacct accagttcat cgaaggcttt gtctccgaga tggtcaccct cttccccgat
      901 ccctactggc atatcggggg cgacgaggtg agccccaggc agtggaatca gagccccgcc
      961 atcaagcgct tccgccggga gcacagtctc aaggacaaca acgagctcca ggcgtacttc
     1021 aaccggcgcc tcttcgccat cctcgaccgg caccatcggc ggccggtggg ctgggacgag
     1081 atcctccacc ccgatctgcc gaagggcgcc gtcatccagt cctggcgcgg caccgagtat
     1141 ctcggccggg ccgcgtcgca gggcaacgcc gggattctct ccgcccccta ctacctcgat
     1201 caccaggaaa gcgccgagta ccactatctc gccgaccctc tcc
//
LOCUS       DATIFF010000108         1465 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_324419, whole genome shotgun sequence.
ACCESSION   DATIFF010000108 DATIFF010000000
VERSION     DATIFF010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1465
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_324419"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1465
                     /locus_tag="VLD58_01635"
     CDS             <1..>1465
                     /locus_tag="VLD58_01635"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HSB53020.1"
                     /translation="PFDPRDLPRVGGFSLVIVLFLIACATLVSEDLACITTGLMIARG
                     SIGFVPGALACFIGIFVGDLLVFLAGRSLGRAVIGRAPISWFLSADAVAVASQWVERQ
                     GARMVFVTRFIPGTRLPSYFAAGMLRTSLARFAFYFFIACAIWTPVLVGLSAAFGEVV
                     QQVLTVFRQRMALYLLVVGLVLFVALKLVLPLCTWRGRRLLLGRWRRLTRWEFWPRWA
                     FYPPVVLYILWLALRHRSLTIFTAANPAIPGGGFVGESKSQILRGLKDAGDLVSPWEV
                     IPGELSDGEKLARVKSLVAEWGSGYPVVLKPDIGERGRGVAIVESEAEALGYLAWTGG
                     DLIVQRFAPGREFGVFYIRMPGEAQGRIFSITDKRLLTLTGDGTHTLEELILRDDRAV
                     CMAPHHFRRHARRLTEVLPAGTPFTLVEVGTHARGALFLDGDWVRTPELEAAIDRVSQ
                     TFDGFYFGRYDIRTENVEEFQRGRGFRVVELNGATAEA"
BASE COUNT          186 a          476 c          524 g          279 t
ORIGIN      
        1 cccttcgatc cgcgggacct tcccagggta ggcggcttct cgctggtgat cgtgcttttc
       61 ctgatcgcct gcgccaccct ggtgagcgag gacctcgcct gcatcaccac cggtctcatg
      121 atcgcgcgcg gctcgatcgg cttcgtgccg ggagcccttg cctgcttcat cgggatcttc
      181 gtgggtgacc tcctcgtctt cctcgccggg cggagtctcg gacgcgcggt catcggccgg
      241 gccccgatca gctggttcct gagcgccgat gcggtggcgg tggcgagcca gtgggtcgag
      301 cgccagggcg cccggatggt gttcgtgacc cgcttcatcc ccggcacccg gctgccgagc
      361 tacttcgcgg cggggatgct ccggaccagc ctggcgcggt tcgccttcta cttcttcatc
      421 gcctgcgcca tctggacccc ggtgctggtg gggctctcgg ccgcgtttgg cgaggtggtg
      481 cagcaggtac tcaccgtctt ccggcaacgg atggcgctgt atctcctggt cgtgggcctg
      541 gtgctgttcg tcgccctcaa gctggtgctg ccgctttgca cctggcgggg gcgacggctc
      601 ctgctgggcc ggtggcggcg gctcacccgc tgggagttct ggcctcgctg ggcgttctat
      661 ccgccagtgg tgctctacat cctctggctc gcgctcaggc accggagtct cacgatcttc
      721 accgcggcca atccggcaat ccccggcggc ggcttcgtgg gagaatcgaa gtcccagatc
      781 cttcgcgggc tcaaggatgc cggtgacctg gtgagtccct gggaggtgat tcccggcgag
      841 ctgagcgatg gagagaagct ggcgagggtg aagtcgctgg tcgccgagtg ggggtcgggg
      901 tatccggtgg tcctcaagcc cgacatcggc gagcgcggcc ggggcgtggc gatcgtggaa
      961 tcggaggcgg aagcgctagg ctacctcgcc tggaccggtg gcgacctgat cgtgcagcgc
     1021 tttgcccccg ggcgggaatt cggggtcttc tacatccgga tgccgggcga agcgcaggga
     1081 cggatcttct cgatcaccga caagcggctc ctcaccctca ccggggacgg cacccatacc
     1141 ctggaggagc tcatcctccg cgatgaccgg gcggtgtgca tggcgccgca tcatttccgg
     1201 cggcacgccc ggcgactgac cgaggtactc cccgcgggga ctccctttac gctggtggag
     1261 gtcggcaccc acgcgcgcgg cgcgctcttt ctcgatggcg attgggtccg tactcccgag
     1321 ctggaggcgg caatcgaccg ggtgagccag acgttcgacg ggttctactt cgggcgctac
     1381 gacatccgga cggagaacgt ggaggagttc cagcgcgggc ggggcttcag ggtggtggag
     1441 ctcaacgggg ccaccgcgga ggcaa
//
LOCUS       DATIFF010000109         2454 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_632000, whole genome shotgun sequence.
ACCESSION   DATIFF010000109 DATIFF010000000
VERSION     DATIFF010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2454)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2454)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2454
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_632000"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(42..800)
                     /locus_tag="VLD58_01640"
     CDS             complement(42..800)
                     /locus_tag="VLD58_01640"
                     /inference="COORDINATES: protein motif:HMM:NF013632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HSB53021.1"
                     /translation="MVPIASLAFIGGMITGSFVGVVAHRVPRGRSIVGPRSECPSCGT
                     QIAAYDNVPVISWVLLGGHCRSCSARIPARYPLVELAVGAAFTATAIVLHDDPAALAL
                     GLVLVALLAAITLTDLERRVIPNAILLVGALIATGIVAATDPSSLPERLGAAAGGGGF
                     LLLAALIYPRGMGMGDVKLAAVMGLFLGVSIVPALFVGIALGALAGFWLILRNGSAAR
                     KHAVPFGPFLAIGGVVGLLAGGQMIDAYLNHLVG"
     gene            complement(854..2392)
                     /locus_tag="VLD58_01645"
     CDS             complement(854..2392)
                     /locus_tag="VLD58_01645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53022.1"
                     /translation="MTARGAKSGAMRLIGRLARREDGMTIAEVMIALLILAGGSLAVL
                     NLITAAAHNSFRSEQSQVVSNRLQSEMERIEQLPYNLVALTGLPADSTNTNNPAWRVQ
                     GASYSITQDGAQPFPLVYNGSALDGGGTVNRGVVDPTPTHFTSGDVGGTIYRYVVWRN
                     DPSCPEVTCPGSQDMKRVIVAIVLDGTAAGGATRPYQEIYKEISNPATSPVNDPNPGP
                     ACTGGADCNTSTGQCTGTDCTGGGNTNPDGVPWTFWLTDTPCNNSSRQPVNADHLLHN
                     TNGLCSAGLKTSSDCSATGCTPGAPDMMVTSAPPLTGETPLWDYATDIEPPLNPDLDK
                     GIQMPPPGSDGCLSSLFQPLVGGAGGPVPDPDATRMQTIHKWLSPQMGTGFNVTLSGT
                     GTLNLWTQSINAASYNGKICVWLFERHLNVFGVPVDTPAVNLATNLTYFTYSASTWPT
                     GWTEIHVPLRFNLPTTLGPSSQLGLAIQVERAGTGGGGMQFLYDEPSFDSRLQVTSQS
                     VLPF"
BASE COUNT          360 a          775 c          931 g          388 t
ORIGIN      
        1 ccaagagtga tgaaccttgg tgggccgagc cgagggccgc cctagcccac gaggtggttc
       61 agataggcgt cgatcatctg gccaccggca agcagcccca cgacgccccc aatggccaga
      121 aacggcccaa aggggacggc gtgcttgcga gccgcggagc cgtttcggag gatcagccag
      181 aacccggcca gggcgcccaa cgcgatgccg acgaagagcg cgggcacgat cgagacgccg
      241 aggaagaggc ccatcaccgc tgccagcttc acgtccccca tgcccatgcc gcggggatag
      301 atgagcgcgg cgagcagcag gaagccgcct ccgccggcgg ccgccccaag ccgctccggc
      361 aggctgctgg gatcggtggc agcgacgatc ccggtggcga tcagtgcgcc gacgagcagg
      421 atcgcgttgg gaatcactcg ccgctcgagg tcggtcaggg tgatcgccgc caggagggcg
      481 acgaggacga ggcccagcgc cagcgccgcg gggtcgtcgt ggaggacgat cgcggtcgcc
      541 gtgaacgctg ctccaacggc caactcgacg agcgggtagc gagccgggat gcgcgcgctg
      601 cagctgcggc agtgcccgcc caggaggacc caggagatca ccgggacgtt gtcgtaggcg
      661 gcgatctgcg tcccgcagga cggacactcg gagcggggcc cgacgatcga gcgcccgcgg
      721 gggacccggt gggcaaccac cccgacgaag ctgccggtga tcatccctcc gatgaaggca
      781 agtgaggcga tggggaccat cgggagtcct ttcggctccc ccgcccggcg gctttaggct
      841 cgccttggcg gcctcagaac ggcaggaccg actggctcgt cacctggagc cggctgtcga
      901 agctcggctc gtcgtagagg aactgcattc ccccgccccc ggtcccggcc ctctcgacct
      961 ggattgcgag gccgagttgg ctgctgggtc cgagtgtggt ggggaggttg aagcggagcg
     1021 ggacgtggat ctcggtccag ccggtgggcc aggtgctggc cgagtaggtg aagtaggtga
     1081 ggttggtggc cagattgacc gcgggtgtgt cgaccggaac cccgaacacg ttgaggtggc
     1141 gctcgaagag ccagacgcag atcttgccgt tgtaggaggc ggcgttgatg ctctgcgtcc
     1201 ataggttgag ggtcccggtt ccgctcagcg tgacgttgaa gccggtgccc atctgcggcg
     1261 agagccactt gtggatcgtc tgcatgcggg tcgcgtcggg atccgggacc ggccctccgg
     1321 ctccgccgac cagcggctgg aagagggagg agaggcagcc gtcgctgccg gggggaggca
     1381 tctggatgcc cttgtccaga tccggattca gcgggggctc gatgtcggtg gcgtagtccc
     1441 agagcggcgt ctccccggtg agcggcgggg cgctggtcac catcatgtct ggcgccccgg
     1501 gcgtgcaccc cgtggcgctg cagtcgctcg aggtcttcag gccggccgag cagaggccgt
     1561 tcgtgttgtg cagcaggtgg tcggcgttga ccggctggcg gctgctgttg ttgcagggcg
     1621 tatcggtgag ccagaaggtc caggggacgc cgtcggggtt cgtgttgccc ccaccggtgc
     1681 agtccgttcc ggtgcactgc ccggtcgacg tgttgcagtc ggcgccgccg gtgcaggccg
     1741 ggcccgggtt ggggtcgttg accgggctgg tcgccgggtt cgagatctcc ttgtagatct
     1801 cctggtaggg ccgcgtggcg ccgcccgccg cggtgccgtc gaggacgatc gccacgatca
     1861 cccgcttcat gtcctgcgac ccggggcagg tgacctcggg gcaggatggg tcgttgcgcc
     1921 agacgacgta gcggtagatc gtgcctccga cgtcgccgct ggtgaagtgc gtcggcgtgg
     1981 ggtcgaccac gccgcggttg acggtgccgc cgccgtcgag ggcgctgccg ttgtagacga
     2041 gcgggaaggg ctgggcgccg tcctgcgtga tcgagtagct cgccccctgc acgcgccagg
     2101 ccggattgtt ggtgttggtg gagtcagccg gcaggccggt gagagcgacc agattgtagg
     2161 ggagctgttc gatcctctcc atctcgctct gcaggcggtt ggagacgacc tggctctgct
     2221 cgctgcggaa gctgttgtgc gcggcggcgg tgatcaggtt gaggaccgcc agcgagccgc
     2281 cggcgagaat caggagcgcg atcatcacct cggcgatggt cattccatcc tcgcgccgcg
     2341 ccagccgccc gatcaagcgc atcgccccgc tcttggctcc ccgagccgtc atgacgctgg
     2401 cccggccggg ttgcgcaggg cggcgccatc ggagacggtg atcgcgtcat cgcc
//
LOCUS       DATIFF010000110         7448 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_785943, whole genome shotgun sequence.
ACCESSION   DATIFF010000110 DATIFF010000000
VERSION     DATIFF010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7448
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_785943"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..397)
                     /locus_tag="VLD58_01650"
     CDS             complement(<1..397)
                     /locus_tag="VLD58_01650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53023.1"
                     /translation="MGCALVLGLGVTHGASAQERPPPRVDLHENYPNPFFPSTTIPFV
                     LGPELCERGHQPLVSLKIYNVLVQVVAVPVLLNSNGERLDGLRLRCGSHEAYWDGKLL
                     DGKNRELTQGVYYAQLTVDGERYTLKMIAR"
     gene            complement(482..2338)
                     /gene="selB"
                     /locus_tag="VLD58_01655"
     CDS             complement(482..2338)
                     /gene="selB"
                     /locus_tag="VLD58_01655"
                     /inference="COORDINATES: protein motif:HMM:TIGR00475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0001514 - selenocysteine incorporation
                     [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HSB53024.1"
                     /translation="MIIGTAGHIDHGKSALVEALTGTAMDPLAEERRRGITLDLHFAP
                     LQLGDVVAGVIDVPGHEDLIRTMVAGAAGLDLVLLIVSADEGIMPQTREHLAIVEQLR
                     VPAGIPVITKSDLVEPEWLALVESEIATWLAGSPVPFTSPVVTSATRGEGIEELRATI
                     VAQAGHSRRRSPNDLFRLPVDRALSFAGVGTVLTGTAWSGRLSLGDSVRLLPGGDEGR
                     VRSLEHHGAVVEVSTPGARTAVGLAGIDRAEVRRGDVLVRKDDPWQETSAIDVALDLL
                     GGAPRPLTHHTRVRLNLGTDEIMARVSVSQPVSPGATGLARLSLERPVVARGGDRFVL
                     RSYSPVTTIGGGWILDPLPPRGRPAWPGAIADANPASRLQALVERRATGVDLAMVPVL
                     LGVAPDKVDGVVHQSGLLRAGQSLVSPQTVEAASQRAALVLAEYHAAHPAERGMPLET
                     LRQSLSRWGGAGEAALDRLADASKVVLEGGLIRSGAFKPAPAANNLLVEQLVRRLDEA
                     GLTPPTTRELETELGSAGIAEALRSAAKAGRVEPVERDRFFSARALESFRARVVELGT
                     TGAVTLQALRDATGLSRKFLIPLLEWCDRSGVTIRDGDVRQLTPRARAGSGA"
     gene            complement(2335..3099)
                     /gene="recO"
                     /locus_tag="VLD58_01660"
     CDS             complement(2335..3099)
                     /gene="recO"
                     /locus_tag="VLD58_01660"
                     /inference="COORDINATES: protein motif:HMM:TIGR00613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HSB53025.1"
                     /translation="MPQVSTPAIVLATLRYGETSKIVRLATRDHGVQSAIAKGALRPK
                     SRFGAALQVLSGGQAQLILSERRDLHLLTAFDFAAVPVSIARDVGRYATATVLAEITL
                     HFSPAEPHPESFEVLKRALARLEAVERVDLLAASLQEVWRVVGSLGFAPALEDCVRCG
                     RPIPGGGPLPFSAPDGGALCGACTGGPESTLLPPDARDALVMLVGEGDDLPSMDERNA
                     AAHRRLAARYIRYHMGEGARLPALEFWLTQAWGGTA"
     gene            complement(3112..4164)
                     /locus_tag="VLD58_01665"
     CDS             complement(3112..4164)
                     /locus_tag="VLD58_01665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53026.1"
                     /translation="MRSSRWAMLLGAAGVVLGCAEASAPLPAAEEVLLLVHRTSGSLS
                     LIRVKAPTIVTPIPLGSLTGTPTTVSALDGYAVVPLGEDPAVAVVNLRTAVVERTIPL
                     PANSGATGAAMVDDSIAYVANPRRNSVTRINYLTGDTASVAVGQTPQTLVFTRGKLFV
                     VNANLNNAGVPLGPSWVSVVDPVTNRLATGVDSILLPGPGKGASADVAQDGVVYIMNA
                     GPDDGTTDSRLSLVDPVGREELGNFKGFGNAAGAVSDNGGGTLYVSSLTQGLMSFDLI
                     NRQVIRGAGSGISIPDNSSVAVDGDGRIYATETGPCTPGSNGKLHILRSALIETRVVT
                     VAECPVAALVTEVPPQ"
     gene            complement(4198..5127)
                     /locus_tag="VLD58_01670"
     CDS             complement(4198..5127)
                     /locus_tag="VLD58_01670"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-binding protein"
                     /protein_id="HSB53027.1"
                     /translation="MRIVSLLPSATEMLCALGLEDQLVGVTHGCDFPETVTRLPRVTS
                     TGIPHDAPSAEIDRLVRERHAAGLPLYDLDRELLTRLRPDLLVTQGLCDVCAVPDRDA
                     RDVAAELPGCPAVVSLAPRTLEDVFANILELGQLTGRNGEAALLVSDLRDRTDRVRAV
                     TGKAGYHPRVTLLEWLDPLYACGHWTPELVEYAGGREGHARTGDASRVLSWGEVIAWQ
                     PEVMVIAGCGLTVTEVRQEFHSLERRPGFDQLPCARTGRITAVDGLAYFSRPGPRLVD
                     SLELLAHLLHPDLFPSSPAPSLSLGTAPRPVPA"
     gene            complement(5131..7089)
                     /locus_tag="VLD58_01675"
     CDS             complement(5131..7089)
                     /locus_tag="VLD58_01675"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HSB53028.1"
                     /translation="MHYSRSRSLPLGGQVVGLVAAVAFAAPLAAQATQRDTTTLPELV
                     VTAERTPTPVDRSIATTTVIRGEDLRAQGIYFIEAALKQVPGATPVPTGSFGGISSLF
                     LRGGESDYVKVLVDGVAINQPGGAFDFGTLSTDNIDRIEIVRGPVSVLYGSDAVTGVI
                     QIFTRRGAPGISANASSQAGTYGTWTGQAGASGAVGPLSFSGSLSRYQTDGIYRFNSG
                     YRNTTGSGEVTWRPDARSEVTLTARRDDHTLHFPTDFTGAVVDSNQRSSGQATTLGVD
                     LGRRLGSKVDLRVHLDSRRETSSSKNPPDSPGDTDFPSDNSGRSLRRAVSASADVQVA
                     RGLRVISGADAAFEALLEGGTSGAFDTTRHNYGLFSQGVLQAGARAVINVGGRIDQNQ
                     RFGTHATVRAGASYRLTSSLRARGSIGTSFKEPSLRENYAAGLFERGNPDLDPEKARS
                     WEIGLEQTLLAGDLTIAANYFDQRFRDLIQYDGSAGPTDPTYQNVARATSRGVEVMTS
                     LRPLPALTLSGSYTYLFTRVDDAGFATDPNDVFVEGKALIRRPKHSFRFDARTQVSRV
                     SLGTGINYVGRRDDVDFRVFPQVRTSLKSYVTVDADAAVDLIRRGPGRPGLAATVRAE
                     NLFDKDYDTVVGFAGRGRTILAGGRVSW"
     gene            complement(7105..>7448)
                     /locus_tag="VLD58_01680"
     CDS             complement(7105..>7448)
                     /locus_tag="VLD58_01680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB53029.1"
                     /translation="RVRVARALAQGPRALLLDEPTSALDIRHEMEVFELVRKLAGEGI
                     GTLLVTHHLNLAARYADRLLLLDRGTVVAEGAPADVLTSEVVSPVFEWRVAVTSWCDG
                     APQVVPLKPGE"
BASE COUNT         1236 a         2560 c         2561 g         1091 t
ORIGIN      
        1 gccgggctat catcttgagc gtatagcgtt cgccatcgac cgtcagctgc gcgtagtaga
       61 ccccctgggt cagttcgcgg ttcttgccat ccagcagttt gccatcccag tacgcctcgt
      121 gggagccaca ccggagccgg agcccgtcca gacgctcgcc attcgaattc agcaggaccg
      181 gtacggcgac gacctgcacc agcacgttgt aaatcttcag actgaccagg ggctgatgac
      241 ctctttcgca aagttcggga cccaggacga atggaatcgt cgtcgacgga aagaatggat
      301 tggggtagtt ctcgtgcagg tccacccgcg gggggggccg ctcctgggcc gaggcaccgt
      361 gggtgacccc gagcccgagc acgagcgcgc accccatcaa ccacggaacg cgcattctct
      421 ctcctgagtc atgccgatat gggagataat cgtctgcccc atgaccggac gcaagcagat
      481 atcaggcgcc gctgccggcg cgggcgcgcg gggtcaattg ccgcacatcc ccatcgcgaa
      541 tcgtgactcc gctgcggtca caccactcaa gcagcgggat caggaacttg cgggagagcc
      601 ccgtcgcatc ccgtaacgcc tgaagcgtta cagcccctgt cgtgcccagc tcgaccaccc
      661 gggcgcggaa cgactccagc gccctggcgc tgaagaaacg atcacgttcg accggctcca
      721 cccttcccgc cttcgcggcg gaccggagcg cttcggcgat cccggccgag ccgagctcgg
      781 tctcgagttc acgagtggtc ggcggagtaa ggccagcttc atcgagccgc cgcaccagct
      841 gttcaaccag cagattattc gccgccggag ccggcttgaa cgcgccgctc cggatcagtc
      901 ccccctcgag gaccaccttc gatgcgtcgg ccagccggtc gagcgcggct tcaccagcgc
      961 cgccccagcg gctgagcgac tgccggaggg tctcgagcgg catgccccgt tcggcggggt
     1021 gggcggcgtg atactccgcc agcacaaggg cggcgcgctg gctcgcggcc tcgaccgttt
     1081 gaggactcac aagactctgt cccgcacgga ggaggccgct ctggtgcacc acgccatcga
     1141 ccttgtccgg cgccacgcca agcagcaccg gcaccatggc gaggtccacg ccggtcgccc
     1201 ggcgctccac cagcgcctgg aggcgggacg ccgggttggc gtcagcgatg gcgccaggcc
     1261 aggccggccg cccgcgaggc ggcagcggat cgaggatcca gccgccgccg atcgtggtga
     1321 ccgggctgta actgcggagc acgaaccggt cgcccccgcg agccacgacc ggccgctcga
     1381 gcgagaggcg agccaaaccg gtggcgccag gcgaaacggg ctgggagacc gaaacccggg
     1441 ccatgatctc atcggtgcca agattgaggc gtacccgggt gtgatgcgtc aaaggccgcg
     1501 gagcaccgcc cagcaggtct aacgcgacat cgatggcgga agtctcctgc cagggatcgt
     1561 ccttccgcac cagcacgtcg ccccggcgta cctccgctcg atcgatgccg gcgagtccca
     1621 cggccgtccg ggcaccggga gtgctcacct cgacgacggc gccgtggtgc tccagggaac
     1681 ggaccctgcc ctcgtctccc ccgggaagca gccggaccga gtctccgagt gaaaggcgcc
     1741 ccgaccaggc ggtgccggtc agcacggttc ccacccccgc gaacgacaat gcccggtcta
     1801 cgggcaaacg aaagagatcg ttgggcgagc ggcggcggga gtggccagcc tgcgccacga
     1861 tcgtggcgcg gagctcctcg atcccttcgc cgcgggtcgc cgaggtcacc accgggctgg
     1921 tgaacggcac cggggatccg gcgagccagg tcgcgatctc gctctcgacc agggccagcc
     1981 actccggctc taccaggtcg ctcttggtaa tgacgggaat tccggccgga acccgcaact
     2041 gctcgacgat ggcaaggtgc tcccgggtct ggggcatgat tccttcgtcg gccgagacga
     2101 tcagcagcac caggtcgagt cccgccgcgc ccgccaccat ggtgcggatc aggtcctcgt
     2161 gccccggcac gtcgatcacc ccggccacca catcgccgag ctggagcggg gcgaagtgca
     2221 ggtcgagcgt gatgccccgg cggcgctcct cggccagtgg gtccatcgcg gtcccggtga
     2281 gcgcctccac cagggctgac ttgccatgat cgatgtggcc ggcggtgccg atgatcatgc
     2341 ggtgccgccc caggcctgcg tcagccagaa ctcgagggcg ggcagcctgg ccccttcgcc
     2401 catgtgatag cggatgtacc gggccgcaag tctccggtga gcggcggcat tccgctcatc
     2461 catgctgggc aggtcgtcgc cctcaccgac cagcatcacc agcgcgtcgc gcgcatcggg
     2521 tggcaggaga gtactctcgg gacctccggt gcaggcgcca cagagcgcac cgccatcggg
     2581 agcgctgaag ggaagcggcc cgcccccggg gatcggccgg ccgcagcgta cacagtcctc
     2641 gagcgccggc gcaaagccga gcgagcccac cacccgccac acctcctgca ggctcgccgc
     2701 cagaaggtcg acacgctcca ccgcttcgag cctcgccagg gcccgtttga gcacctcgaa
     2761 gctctcggga tgcggctcgg ccggagagaa gtggagcgtg atttcggcca ggacggtggc
     2821 ggtagcgtag cggcccacgt cgcgggcaat ggagacggga accgcggcga agtcgaacgc
     2881 tgtgagcagg tggagatcgc gccgctcgga gaggatcaac tgggcctgac ccccactcag
     2941 gacctggagg gcggcgccga agcggctctt gggacggagg gcgcccttgg caatggcgct
     3001 ctgcactcca tgatcccggg tggcgaggcg gacgatcttc gaggtttcgc cgtagcgcag
     3061 tgtggcgagg acgatggcgg gggtcgagac ctggggcacg acggcggacg cctactgcgg
     3121 cggcacttcc gtcaccagcg cggcgacggg gcactccgcc accgtcacaa cccgcgtctc
     3181 gatcagggcc gagcgaagaa tgtggagctt gccgttgctt ccgggggtgc agggcccggt
     3241 ctcggtggcg tagatccgcc cgtccccgtc gaccgccaca ctgctgttgt cgggaatgga
     3301 gatgccactc ccggccccgc ggatcacctg gcggttgatg aggtcgaacg acatcagccc
     3361 ctgggtgagc gagctgacgt agagcgtgcc gcctccgtta tcgctcaccg ctccggcggc
     3421 gttcccgaaa cccttgaagt tgcccagttc ttcacggccc accggatcga ccagcgagag
     3481 ccgcgagtcg gtggtaccgt cgtccggccc ggcattcatg atgtagacca cgccgtcctg
     3541 cgccacatcg gcggaggcac ccttgcccgg gcccgggagg agaatcgagt cgacccctgt
     3601 ggcgagccgg ttggtcaccg ggtccaccac cgagacccag ctcgggccca gcggaacgcc
     3661 ggcattgttc aggttggcat tcaccacaaa gagcttgcca cgggtaaaga ccagcgtctg
     3721 gggagtctgt cccaccgcca cgctggcggt gtcgcccgtc agatagttga tgcgggtgac
     3781 gctgttccgc ctgggattgg cgacataggc gatcgagtcg tccaccatcg cagcaccggt
     3841 ggcgccggag ttggccggga gcggaatggt gcgctcgacc acggcagtcc tcaggttgac
     3901 caccgccacg gcgggatcct cgcccagcgg cactaccgcg tacccgtcga gcgcgctcac
     3961 cgtggtgggc gtgccagtga ggctaccgag cgggatcggg gtgacgatgg tgggcgcctt
     4021 gacccggatc agactgagag aaccgctggt gcgatgcacc agcaacagaa cctcttcggc
     4081 cgcgggaagc ggggccgagg cttccgcgca gcccagcact accccggccg ctccgagcag
     4141 catggcccat cgtgaggaac gcatgcctga aagatgtggg gggcagcccc tcggggacta
     4201 ggccggcacc gggcggggcg ctgtacccag ggagagactg ggtgctggcg aactcgggaa
     4261 gagatcggga tgaagcaggt gcgccagcag ttcgagactg tccaccaggc gcgggccggg
     4321 gcggctgaag taggccaggc catcgaccgc ggtgatcctc ccagtgcggg cacacgggag
     4381 ctgatcgaag cccggccggc gctccagcga gtggaactcc tgccgcacct ccgtcacggt
     4441 aaggccgcac ccggcgatca ccatcacctc gggctgccac gcgatcactt cgccccagct
     4501 gagaacccgg ctcgcatcgc cggtgcgggc gtgtccttcc ctgcccccag catactcgac
     4561 cagttcgggg gtccagtggc cgcaggcata gagcgggtcc agccattcga gcagggtgac
     4621 gcgcgggtgg tagccggcct tgcctgtcac cgctcgcacc cggtcggtgc ggtcacgcag
     4681 gtcgctcacc agcagtgccg cctcaccgtt acgcccggtg agttggccca gctcgaggat
     4741 gttggcgaac acatcctcga gcgtgcgcgg cgcgaggctc accaccgcgg ggcaacccgg
     4801 cagctcggcg gcgacatccc gagcgtcgcg atccggaaca gcgcagacat cgcagagccc
     4861 ctgggtcacc agcaggtcgg gccggagccg ggtgagcagc tcgcgatcga gatcgtaaag
     4921 cggcaaccct gccgcatgcc gctcccgcac cagccggtcg atctcggcgc tgggcgcatc
     4981 gtgcgggatc ccggtactgg tgacccgcgg gaggcgggtc accgtctcgg gaaaatcaca
     5041 cccgtgggtc acgcccacga gctggtcctc cagcccgagc gcgcagagca tttcggtggc
     5101 gctggggagg agcgatacga ttctcatcga ctaccaggac acccggccgc cggcgaggat
     5161 cgtccggccc cgccccgcga agcccaccac ggtgtcgtag tccttgtcga acaggttttc
     5221 ggcccgcacc gtcgccgcca ggcccggccg gcccggcccc cgacggatca ggtcgaccgc
     5281 cgcgtcggca tcgacggtaa cgtaggactt gaggctggtg cgcacctggg ggaaaacccg
     5341 gaaatcgaca tcgtcccgcc ggccgacgta gttgatccct gttcccagcg acacccggct
     5401 tacctgggtg cgggcatcga agcggaagct gtgcttgggc cggcggatca gtgccttgcc
     5461 ttccacgaac acgtcgttgg gatcggtggc aaacccggcg tcgtccaccc gggtgaagag
     5521 ataggtgtac gagcccgaca gggtgagggc cggcagcgga cggaggctgg tcatcacctc
     5581 gacgccccgg ctggtggccc gggccacgtt ctgataggtc ggatcggtgg gacccgccga
     5641 gccgtcgtac tggatcaggt cgcggaagcg ctggtcaaaa tagttggccg cgatcgtcag
     5701 atcgccggct agaagcgtct gctccagccc gatctcccag ctccgcgctt tctctggatc
     5761 gagatcaggg ttgccccgct cgaagaggcc cgccgcgtag ttctcccgaa gcgacggctc
     5821 cttgaacgac gtcccgatcg agccacgggc gcggagactg gaggtgagtc gatagctggc
     5881 gccggcccgc accgttgcgt gagtgccgaa ccgctggttc tggtcgatcc gcccgccgac
     5941 gttgatcacc gcgcgcgcgc ccgcctgcag tacaccctga gagaacagcc cgtaattgtg
     6001 acgggtggta tcgaacgcgc cgctggtgcc cccctcgagc agcgcctcga acgccgcatc
     6061 ggcgccgctg atgacccgga ggccgcgggc cacctgcacg tccgcactgg ccgagaccgc
     6121 tcggcgcagg ctccggccgg agttgtccga cgggaaatcg gtatcgccgg gactgtccgg
     6181 cggattcttc gacgagctgg tttcccgccg ggagtcgagg tgcacccgca ggtccacctt
     6241 gctcccgagg cggcggccca ggtcgacgcc gagcgtggtg gcctgaccgc tcgagcgctg
     6301 gttgctgtcg accacggccc cggtgaagtc ggtcgggaaa tgcagggtat gatcgtcgcg
     6361 ccgcgcggtg agggtcactt cgctccgggc atcggggcgc caggtcactt ccccgctgcc
     6421 ggtggtgttc cggtagccgc tgttgaaccg gtagatgccg tcggtctgat aacgggacag
     6481 gctcccactg aacgagagcg ggccaaccgc gccggaggcg ccggcctgtc cggtccaggt
     6541 accgtaggtc ccggcctggc tcgaggcatt ggcggagatt cctggcgcgc cgcggcgggt
     6601 gaagatctgg atcacgccgg tgacggcgtc ggagccgtac agcaccgaga ccggcccgcg
     6661 cacgatctcg atccggtcga tgttgtcggt gctgagggtg ccgaaatcga aggcgccccc
     6721 cggctggttg atggcgaccc catcgaccag caccttcaca tagtcgctct cgccacccct
     6781 caggaagagg gaggagatcc cgccgaacga accggtcggc accggcgtgg cgcccggcac
     6841 ctgcttgagg gcggcttcga tgaagtagat cccctgggcg cggagatcct caccccggat
     6901 caccgtggtc gtcgcgatcg agcggtcgac cggcgtcggc gtacgctcgg ccgtgaccac
     6961 cagctcagga agggtggtgg tgtcgcgctg agtcgcctgc gcggcaagag gagcggcaaa
     7021 tgccaccgcg gcgacaagac ccacgacctg gccccccaac gggagcgacc gactgcgaga
     7081 gtagtgcacg cgaaatcctc ccggctattc gccgggcttg agaggaacca cctggggtgc
     7141 gccgtcgcac cagctggtga cggcaacccg ccattcgaac accggagaaa cgacttcgga
     7201 ggtgagcacg tccgccggcg cgccttcggc caccaccgtg ccacggtcga gcagcagcag
     7261 gcggtcggcg taacgggccg caaggttgag atggtgggtc acgagcaggg tgccgatacc
     7321 ctcccctgcc agtttccgca ccagctcgaa gacttccatt tcgtgacgga tgtcgagggc
     7381 cgaggtgggc tcgtcgagca ggagcgcccg gggaccctgg gccagagccc gggccacccg
     7441 gacccgct
//
LOCUS       DATIFF010000111         1915 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1401764, whole genome shotgun sequence.
ACCESSION   DATIFF010000111 DATIFF010000000
VERSION     DATIFF010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1915
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1401764"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1197
                     /locus_tag="VLD58_01685"
     CDS             <1..1197
                     /locus_tag="VLD58_01685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53030.1"
                     /translation="DMSVPLRHPRYAPEFRIRINGEELPKAARAAVTAVRFEDGIQRA
                     DRVEISFANHDLRFLQKHIKGLGFQPFPTGIRIGPLHGASAAPGGVFDIDNTVALAIG
                     YAPDPLTDVFLGEVTGVQATFPSGGVPTLSMVAHDYLQRLSRGSSARGFGAVPDFMVA
                     AILGAENMLIPLIDPTIAAASAAMAGVGMIFSGTGIKQKGQSNLQLLTEIAKRYDAEF
                     WVEGNTLHVNRLLKEYTPRLTLTWGQSLIDFSPQMSTVGSVAGVSVKFTLKEIPMDFL
                     VTAGWDFDRESLSITVVPGQAAKGAPSMSSPAFTIIDRPITSPADIANSAISIVTELR
                     AKLNGRLTATATAVGDPRIAAGALVRIEGIGPDFSGDYRVRSATHSIDSGGYRTSFQV
                     YKEIIP"
     gene            1194..1850
                     /locus_tag="VLD58_01690"
     CDS             1194..1850
                     /locus_tag="VLD58_01690"
                     /inference="COORDINATES: protein motif:HMM:NF016595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HSB53031.1"
                     /translation="MIEDVLEMLETRLGAMHERLPGVVVGTVSSVDDPMTLGRVQVKI
                     PAIDSSDTAPWARVATPMAGSEMGIYFIPRVDDEVLIAFEHGSPQAPYVIGALWNANN
                     PPPLPSPSAEIRKIKTPAGIEVILSDRPTTVTISTPNKEKIEIADEGITIETSSAKIV
                     VGASEASVKITAGSNKIELTSSGITVDASPNLTLKASGNIDIQGGATCSISAATVKIN
                     "
BASE COUNT          335 a          686 c          624 g          270 t
ORIGIN      
        1 gacatgagcg tccccctccg tcatccgcgc tacgcgcccg agttcaggat ccggatcaac
       61 ggcgaggagc tgccgaaggc ggcccgggcc gcggtgaccg ccgtgcgctt cgaggacgga
      121 atccagcgcg ccgaccgggt ggagatcagc ttcgccaacc acgacctccg gtttctgcaa
      181 aagcacatca agggcctcgg cttccagccc ttcccgaccg ggatccggat cggcccgctc
      241 cacggagcga gcgccgcgcc gggcggcgtc ttcgacatcg acaacaccgt ggcgctcgcc
      301 atcgggtacg ccccggatcc cctgaccgac gtcttcctcg gcgaggtgac cggcgtccag
      361 gcgacgttcc cctcgggtgg cgtgcccacc ctctcgatgg tggcgcacga ctacctccag
      421 cggctctcgc ggggaagctc ggcccgcggc ttcggcgcgg tgcccgactt catggtcgcg
      481 gcgatcctcg gggcggagaa catgctcatc ccgctcatcg atcccaccat tgcggcggcc
      541 tcggcggcaa tggcgggagt ggggatgatc ttcagcggca ccgggatcaa gcagaagggc
      601 cagagcaacc ttcagctcct caccgagatc gccaagcgct acgacgccga attctgggtg
      661 gaggggaaca ccctccacgt gaaccggctc ctcaaggagt acacgccgcg gctgacgctg
      721 acctggggtc agtcgctgat cgacttctcg ccgcagatga gcacggtggg atcggtggcg
      781 ggagtgtcag tcaagttcac cctcaaggaa atcccgatgg atttcctggt gaccgcgggg
      841 tgggacttcg accgcgagtc gctctcgatc accgtcgtcc cgggccaggc ggccaaggga
      901 gcgcccagca tgagctcgcc ggcgttcacc atcatcgacc ggccgatcac ctcgcccgcc
      961 gacatcgcca acagcgccat ctccatcgtc accgagctcc gcgccaagct gaacggccgc
     1021 ctcaccgcca ccgccaccgc cgtcggcgat ccgcggatcg cggcgggggc gctggtccgg
     1081 atcgagggga tcggccccga cttcagcggc gattaccggg tgcggagcgc gacccactcg
     1141 atcgacagcg gcggctaccg cacctccttc caggtgtaca aggagatcat cccgtgatcg
     1201 aggacgtgct ggagatgctg gagacccggc tgggggccat gcacgagcgg ctccccggcg
     1261 tcgtcgtggg caccgtgtcg agcgtcgacg acccgatgac cctcggccgg gtgcaggtga
     1321 agatcccggc gatcgacagc agcgacacgg cgccctgggc ccgggtcgcg acgccgatgg
     1381 cgggctcgga gatggggatc tacttcatcc cgcgggtgga cgacgaggtg ctgatcgcgt
     1441 tcgagcacgg gtcgccccag gccccgtacg tgatcggcgc cctctggaac gcgaacaatc
     1501 ctccgccgct cccttccccc tccgccgaga tccggaagat caagacaccg gccggcatcg
     1561 aagtcatcct ctcggaccgg ccgaccacgg tgaccatctc gacgccgaac aaggagaaga
     1621 tcgagatcgc ggacgagggg atcaccatcg agaccagctc ggcgaaaatc gtcgtcggcg
     1681 cgagcgaggc gtcggtcaag atcaccgcgg ggtcgaacaa gatcgagctc acctcgagcg
     1741 gcatcacggt ggacgcctcg cccaacctga cgctcaaggc gtcgggcaac atcgacatcc
     1801 agggcggcgc gacctgcagc atcagcgccg ccaccgtgaa gatcaactga catgcctccc
     1861 gcggcccgcg tcggcgatcc caccggacac cccggcacca tcaccgggcc cggcg
//
LOCUS       DATIFF010000112         1389 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1709237, whole genome shotgun sequence.
ACCESSION   DATIFF010000112 DATIFF010000000
VERSION     DATIFF010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1389
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1709237"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..752)
                     /locus_tag="VLD58_01695"
     CDS             complement(<1..752)
                     /locus_tag="VLD58_01695"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSB53032.1"
                     /translation="MADTSLLLVGAGPYALATAAYAQAGGIDTVVVGHPMGFWRDNMP
                     AEMFLRSGPDWHLDAAGVHTLEAFLETRGIAPGEVDPLPISLFLDYADWFRATEAVEV
                     RAELVASLDRPDGRFEAVLESGERLTADAVVAAPGIRHFTNLPAWASSVPAQRRDHTC
                     DLVRFDALAGARVLIVGGRQSAYEWAALLAEHGAARVDVVHRHDVPRFERVSWRFVDA
                     YVESTLRIPGWWRTLQDSPRIAIAQEFWEAGRL"
     gene            complement(1057..>1389)
                     /locus_tag="VLD58_01700"
     CDS             complement(1057..>1389)
                     /locus_tag="VLD58_01700"
                     /inference="COORDINATES: protein motif:HMM:NF016001.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase/quinone reductase family protein"
                     /protein_id="HSB53033.1"
                     /translation="WHRTPGLRAGGDHRPPLGPAAPHPVGNGLGGDTFWLVAAHGAQA
                     DYVRNLQADPKVRVKIGRRWRSGTAVVLPDDDPVVRSRTLPYQWDAAIGRLMASAPLT
                     VRIDLDPT"
BASE COUNT          225 a          483 c          490 g          191 t
ORIGIN      
        1 agccggcccg cctcccagaa ctcctgagcg atcgcgatgc gcggcgagtc ctggagcgtc
       61 cgccaccagc cgggaatccg cagcgtgctc tcgacgtagg cgtcgacgaa tcgccagctc
      121 acccgctcga accgcgggac gtcgtggcgg tggaccacat ccacccgtgc cgcgccgtgc
      181 tcggcgagca gcgccgccca ctcgtaggcg ctctgccgtc ctcccacgat gagcacccgg
      241 gccccggcca gcgcgtcgaa ccggacgagg tcacaggtgt ggtcacgacg ctgtgccggg
      301 accgagctcg cccaggcggg caggttggtg aagtggcgaa ttcccggcgc cgcgaccacg
      361 gcgtcggccg tcagccgctc tccgctctcc aggaccgcct cgaaccggcc atcgggccga
      421 tcgagcgagg cgacgagctc cgctcggacc tcgacggcct cggtggcgcg aaaccagtcc
      481 gcgtagtcga ggaagagcga gatggggagc gggtcgacct cacccggcgc gatcccgcgg
      541 gtctccagga acgcctccag cgtgtgcacg ccggccgcat cgaggtgcca gtccgggccg
      601 gagcgcagga acatctcggc tggcatgttg tcgcgccaaa accccatcgg gtgaccgacg
      661 acgaccgtgt cgatgccacc cgcctgggcg tacgcggctg tggccagcgc gtagggaccc
      721 gcgccgacaa ggagcaagga cgtatctgcc atcccatcga ccgccccccg gacctatgac
      781 gagcatgtag gcctccaaga ctcccacgac ggatggatcc ctggccaggt tcgcggccct
      841 gcggcgccac gcttacacgt tgccaggtgg acgacggcgg gaggaaggtc gcgggcggta
      901 acaagagccg gctgtagcca tcatctcact aaagaccgtt tgagagacgg aggagatgct
      961 ggctgtctac acagtcgggc caatgccggt agacgatggt gcgtcagctg aggaatgccg
     1021 ccgcggtcgc cctcggcgtg atgctggaca gcccgctcag gtggggtcaa ggtcgatgcg
     1081 gacggtcagc ggggcggagg ccatcagccg tccgatcgct gcgtcccact ggtagggcag
     1141 cgtgcgcgag cggaccaccg ggtcatcgtc gggcagcacg actgcggttc cgctgcgcca
     1201 ccggcggcca atcttcacgc gcaccttcgg gtcggcttgc aggttacgca cgtagtcagc
     1261 ctgggctccg tgggcagcga ctagccagaa ggtgtcgccg cccagcccgt tgccgaccgg
     1321 gtgtggcgcg gctggcccga gcggcggccg gtggtctcca ccagcgcgaa ggcccggggt
     1381 gcgatgcca
//
LOCUS       DATIFF010000113         6558 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1863397, whole genome shotgun sequence.
ACCESSION   DATIFF010000113 DATIFF010000000
VERSION     DATIFF010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6558
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1863397"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            74..784
                     /locus_tag="VLD58_01705"
     CDS             74..784
                     /locus_tag="VLD58_01705"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HSB53034.1"
                     /translation="MSRPATHLVLFDIDGTLLLSAGAGRRALTAAMLEEVPDPAVYDL
                     VRFDGKTDPQIVRELLQLANHPGAGDAVLIETICRRYVSFLEDELRHPRTTMTVMPGV
                     LPLLEELERQARVILGLLTGNVVQGAALKLTAAGIGPDRFAVGAYGSDSAYRPDLPAI
                     AARRAEPHFGREPRGSEVIIIGDTPADVTCGQGISARAIGVATGSYSIESLAAAGAHA
                     AFPDLSDTTRVLEAILGE"
     gene            801..1373
                     /locus_tag="VLD58_01710"
     CDS             801..1373
                     /locus_tag="VLD58_01710"
                     /inference="COORDINATES: protein motif:HMM:NF014038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53035.1"
                     /translation="MVADPMVLRQALDDAGAVLRFHGMMRDRRLDKAGELAGRDHVLR
                     VRRWVDEEAGHDVAEAGWKGPTTVNDSGYKQREEIEFSVDDGAAALAMFEALGYTVVE
                     AIDRYVEVYDVEDTVVRIEWFPRMDVLVEIEGDPEGIEQAITRIGLDRNDCVADSLAT
                     FTRRYGERTGQPGILAEEMLQGEPPGWMTR"
     gene            1370..2125
                     /locus_tag="VLD58_01715"
     CDS             1370..2125
                     /locus_tag="VLD58_01715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53036.1"
                     /translation="MTAIMGTELKVPELGPALGRLVAPPPPAPGAPSHWIRLDDVRVG
                     LVTQLFDLLADARRWAREGDRELALATVNREAWEKLWSKAVQELAQRAGAAIGERLTA
                     AAKEVRLPAKRIAALPLDASEVRALGARLSHGSPPLYEALQGLDHTASSVRSDRAPAQ
                     AVEAWQDALTTSARRLEAAWLALEEALGQEWRTWESEIEDLRRWRRPRWPLWAAGVVI
                     FGTALYLGLILGGYLPVPGLLQGPVNALWARWS"
     gene            2116..2502
                     /gene="acpS"
                     /locus_tag="VLD58_01720"
     CDS             2116..2502
                     /gene="acpS"
                     /locus_tag="VLD58_01720"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HSB53037.1"
                     /translation="MELIGVGIDLVDIARVERMIEKLGDRVLRRFLTPREQAYVVARA
                     RPSMHLAARIAAKEATYKALQALPGARAVSWHDLEVERETEGRPFMVLAGLAKELSEK
                     HRLQVQLSLSHSDATAGAVAVITKAS"
     gene            complement(2794..4347)
                     /locus_tag="VLD58_01725"
     CDS             complement(2794..4347)
                     /locus_tag="VLD58_01725"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSB53038.1"
                     /translation="MTAPIPAIDPATGIAFAETPGTPVTALPRMVAAARQAQRDWAAR
                     PLAERRRVIARFQRLFYERRMEAAELIARENGKPLGEALLTDVAVTLDMARYYLDHAE
                     RILRPRRIVHGNIAFLGRRGRLHWEPRGVIAIISPWNYPLLLPFGEMIPALLAGNAVL
                     LKPSEFTTRAAALGVDLLHAAGVPEALCQLVVGGPDVGAALLEAGPDKIFFTGSVRTG
                     RLVAREASARNIPINLELGGSDPCLVLADADLERAASGVVWARFTNGGQTCVAAKRVI
                     VEAPVYERFVGLLVAKVRTLQLGPGLERGVDMGPVIRESQLKEIERQLAATVARGARV
                     LTGGRRRPDLGPTFFEPTVVTEVPFDSPLWREEVFGPILPVVPAANVDEAVRLANDSA
                     FGLSASIWTGHRARGEALALRIEAGAVLVNDATSYVGAAEVPHGGEKDSGVGRSHGEF
                     GMLETCRPRFVGSDRLDWMAKPWWFGYHADSLAARDAFLRFAFAPSLIDRVRAIPGAL
                     KLLFNRRPV"
     gene            4434..6551
                     /locus_tag="VLD58_01730"
     CDS             4434..6551
                     /locus_tag="VLD58_01730"
                     /inference="COORDINATES: protein motif:HMM:NF015213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA];
                     GO_function: GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family protein"
                     /protein_id="HSB53039.1"
                     /translation="MLLISAVHLAVALIGGSPEPTQTQQATTVKRIATSAALAAEEYA
                     AGIVGGKVVAPAEVEEAQLFLQEARRGAAMLPPDAGASVVSSIDSLLAMVRRTAPPDS
                     VEFRARAFSQALAQKFNLSLEEVPAVAPSLAAGAQVYRTQCATCHGPAGRGDGPSAVG
                     LTPTPADLTDFRKLSATTPLDFYRRVTIGVAGTAMPAYESRLTPEERWAVASYSSTLR
                     LPAARGEVPASLNDFSTSARLSDSALAAMLQPGADPAAPDVRARVMAVRSLSSTGEAG
                     ASAGPVFDDVRRQLDSVLVLASQGRGSDASGLAFDAYMTFEKVERGVRAKNAGLANTL
                     EAGFANLRTRAAGGGTTDELQAIHTRLLSDLENAERTVSDRLSPLNLFTQSLILLLRE
                     GLEAILVVGALMAFLAKTGAAHRKRDIHVGVGAAIGASLLTAVLLETIFQVSQSRQET
                     LEGAVMLVATAMLFYVSYWLLSKMEVAKWNKFVKGRVQDAVSSGSALALASVAFLAVY
                     REGFETVLFYKALFLAGSGSALPVFLGMAVATVGLAVVYLAINRYGVRIPLKPFFGLT
                     SAFLYYMAFVFAGKGIAELQEGSLIGTTVLPWAPRIPALGIYPTLESLSLQAVLVLFL
                     VAGLVWTFVIEPRRLAVTNVMVPEHPAQSAPVAATMVHPMEPTTEVDILRSLDRMDAD
                     LAELRAEVDRLRSLLRKGAHRTG"
BASE COUNT          988 a         2302 c         2260 g         1008 t
ORIGIN      
        1 tgatggagcc gtgggggccc ggctcccgtg cgatgatgct gcgggcccag ctggtcggga
       61 tccggagggt cgattgagcc ggccggcgac ccatctcgtt ctcttcgata tcgacgggac
      121 gctgctcctc tccgcgggcg cgggccggcg ggcgctcacc gcggcgatgc tcgaggaagt
      181 gcccgatccg gcggtctacg atctggtgcg cttcgacggg aagaccgatc cccagatcgt
      241 gcgggaactg ctccagctgg cgaaccatcc gggcgccggc gacgcggtgc tcatcgagac
      301 catctgccgc cgctacgtga gcttcctcga ggacgaactg cggcatccgc gtaccaccat
      361 gaccgtgatg cccggggtgc tcccgctgct ggaggagctc gagcggcagg ccagggtgat
      421 cctcggccta ctcaccggga acgtggtgca gggcgccgcg ctcaagctca ccgccgccgg
      481 catcggaccg gatcgcttcg ccgtcggcgc ctacggatcc gactccgcct atcgccccga
      541 tctccccgcg atcgccgcgc gccgggccga gccgcacttc gggcgggagc cgcggggcag
      601 tgaagtgatc atcatcggcg acaccccggc cgacgtcacc tgcggccagg ggatctccgc
      661 ccgggccatc ggggtggcca ccgggtccta ctccatcgaa tcgctcgccg ccgccggcgc
      721 tcacgcggcc tttcccgatc tgagcgacac cacccgcgtc ctcgaggcca ttcttggcga
      781 atgagatcga attgaaatcc gtggtggccg accccatggt cctgcgccag gcgctcgacg
      841 acgccggcgc ggtgctccgc ttccatggga tgatgcggga ccgccggctc gacaaggccg
      901 gggaactcgc cgggcgcgat catgtgctcc gggtccgccg ctgggtcgat gaggaagccg
      961 gtcatgacgt ggccgaggcc gggtggaagg ggccgaccac ggtcaacgac tcaggctaca
     1021 agcagcggga agagatcgag ttttcggtgg acgacggcgc cgccgcgctg gcgatgttcg
     1081 aggcactcgg gtacaccgtg gtggaagcga tagaccgcta cgtcgaggtc tacgacgtcg
     1141 aggacaccgt ggtgcggatc gagtggttcc cgcggatgga tgtgctggtc gagatcgagg
     1201 gtgaccccga agggatcgag caggccatca cccggatcgg tctcgaccgc aacgactgtg
     1261 tggccgactc gctcgccacc ttcacccgcc gctacggtga gcggaccggg cagcccggga
     1321 ttctcgccga agaaatgctc cagggcgaac cgcccggctg gatgacccgg tgacggcgat
     1381 catgggtact gaactcaagg ttcccgagct cgggcccgcc ctgggccggc tggtggcgcc
     1441 cccgcctccg gcgccgggtg cgccatcgca ttggatccgg ctggatgatg tccgcgtcgg
     1501 gctggtgacc cagctctttg atctgctcgc ggatgcccgc cgctgggccc gcgagggcga
     1561 ccgtgagctg gccctggcga ccgtgaatcg cgaagcgtgg gagaagctct ggtcgaaggc
     1621 ggtgcaggaa ctggcgcagc gggccggcgc cgcgatcggc gaacggctca ccgccgcggc
     1681 gaaagaagtg cgtctcccgg cgaagcgcat cgcggccctg ccgctcgatg cctcggaggt
     1741 gcgcgcgctg ggggcacgcc tctcacatgg ctcgcccccg ttgtacgaag cactccaggg
     1801 gctggatcac acggcaagca gcgtccggag cgatcgggct ccggcgcagg cggtcgaagc
     1861 gtggcaggac gcgctcacca cttcggcgcg gcggctggaa gcggcctggc tcgcgctgga
     1921 ggaagcgctg ggccaggagt ggcgtacctg ggaaagcgag atcgaggacc tgcgccgctg
     1981 gcgccggcct cgctggcccc tctgggccgc cggggtggtc atcttcggca ccgcgctcta
     2041 cctcggactc atactcggcg gctatctgcc ggtgccggga ctgctccagg gcccggtcaa
     2101 cgcactctgg gcccgatgga gctgatcggg gtcgggatcg acctggtcga tatcgcccgg
     2161 gtcgaacgga tgatcgagaa gctgggcgac cgcgtcctgc ggcggttcct caccccccgc
     2221 gaacaggcct acgtcgtcgc gcgggcccgg ccctcgatgc acctggccgc ccgcatcgcc
     2281 gcgaaggaag cgacctacaa ggcgctccag gcgctgccgg gcgcacgcgc ggtgagctgg
     2341 catgacctgg aggtcgagcg ggagaccgaa ggccggccct tcatggtgct ggcggggttg
     2401 gcgaaggagc tgagcgagaa gcaccggctg caggtccagc tctcgctctc gcactccgac
     2461 gcgacggccg gggcggtggc ggtgatcacc aaggcttcct gagccgattc accgcagagg
     2521 cgcggaggcg cagagggccg cagagggttc gaggaacggg acagcgaccg ctgtcccgtt
     2581 gtttttgttt cttactctgc tgttgtttct ttttcccact gaagacgacc accaacaaca
     2641 accaccacca aaaaccacca ccaaaaacca ccaccaagaa caacagcaac tggctcacgg
     2701 tgactgcgat cgagttggag ctaagggcgg caaggacccc tctgcggccc tccgcgcctc
     2761 tgcgcctctg cggtggtctt ttcagttagg tgcttacacc ggacgccggt tgaacaggag
     2821 cttgagcgca ccgggaatag cccgcacccg gtcgatcagc gacggcgcga aggcgaaacg
     2881 gagaaaggca tcccgggctg ccaggctgtc cgcgtggtac ccgaaccacc acggcttggc
     2941 catccagtcg agccggtcac tccccacgaa cctcggccgg caggtctcga gcatcccgaa
     3001 ctcgccgtgg ctccggccca cccccgaatc cttctcgccg ccatgcggca cctcggccgc
     3061 gcccacgtag ctcgtcgcat cgttcaccag taccgcgccg gcctcgatcc ggagtgccag
     3121 cgcctcgccc cgggcccggt ggccggtcca gatactggcg gagaggccga acgccgagtc
     3181 gttcgcgagc cggacggcct cgtccacatt cgcggccggc accaccggca ggatcggacc
     3241 gaacacctcc tcccgccaga gcggcgagtc gaaaggcacc tcggtgacga ccgtcggctc
     3301 gaagaacgtc ggcccgagat cgggacgccg ccttccgccg gtgagtaccc gggcgccccg
     3361 cgcgacggtg gcggcgagct gccgctcgat ctccttgagc tgcgattccc ggatcaccgg
     3421 ccccatgtcc acaccccgct caagcccggg cccgagctgg agcgtacgga ccttcgccac
     3481 cagcagcccg acaaagcgtt cgtagaccgg cgcttcgacg atgacccgct tggccgccac
     3541 gcaggtctgc ccgccgttgg tgaaccgggc ccagaccaca ccgctcgcag cccgctcgag
     3601 gtcggcgtcg gccagcacga ggcaggggtc actcccaccc agctcgagat tgatcgggat
     3661 gttgcgggcg gatgcttccc gggcgaccag tcgtccagtc cgcacgctgc cggtgaagaa
     3721 gatcttatcc ggcccggcct ccaggagcgc agccccgacg tcggggccgc ctaccacgag
     3781 ctggcagagc gcctccggca ccccggcggc gtggagcagg tcgacgccga gtgccgccgc
     3841 ccgggtggtg aattcgctgg gcttgaggag caccgcgttg ccggcgagga gcgccgggat
     3901 catctcgccg aagggcagga gcagcgggta gttccagggc gagatgatcg cgatcacgcc
     3961 ccgtggttcc cagtggagcc gtccccgccg gccgaggaac gcgatgttgc cgtgcacgat
     4021 ccggcggggc cggagaatcc gctcggcatg gtcgaggtag tagcgcgcca tgtcgagcgt
     4081 gacggcgacg tcggtcagaa gcgcttcgcc cagcggcttc ccgttctccc gtgcgatcag
     4141 ctccgccgcc tccatccgcc tttcgtagaa gagccgctgg aaccgggcga tgactcggcg
     4201 tcgttctgcg agtggccggg cggcccagtc ccgctgggcc tgccgggccg cggccaccat
     4261 cctcggcaag gcggtgaccg gggtgccggg ggtctcggcg aaagcgatgc cggtggcggg
     4321 atcgatggcg gggatggggg cagtcatgcc cggaatgtcg cccggtgccg agctcccttc
     4381 caaatccgac tcgccgggcg tactttatcc gcaagctcaa acactggttg agaatgcttc
     4441 tcatctctgc ggtgcacctg gctgtggcgc tcatcggcgg ttctcccgag cccacgcaga
     4501 ctcagcaggc gaccacagtc aaaagaatcg cgacctccgc cgccctcgcc gcggaggagt
     4561 acgcggccgg catcgttggc ggcaaggtcg tggcgccggc cgaggtggag gaggcgcagc
     4621 tcttcctcca ggaggcccgc cggggtgccg cgatgctccc gcccgatgcc ggcgcctcgg
     4681 tggtcagctc catcgacagc ctgctcgcca tggtgcgccg gaccgcgccc ccggactcag
     4741 tggagttcag ggctcgcgcg ttctcccagg cgctggctca gaagttcaat ctctcgctcg
     4801 aggaagtgcc tgcggtcgca ccgtcgctcg cggccggagc gcaggtctat cgcacccagt
     4861 gcgccacctg ccacggtccc gccgggcggg gcgatggccc gagcgcggtc ggcctgaccc
     4921 cgacgcccgc cgatctcacc gatttccgga agctctccgc caccacgccg ctcgacttct
     4981 atcgccgggt caccatcggg gtggccggca cggcgatgcc cgcgtacgag agccggctca
     5041 cacccgaaga gcgctgggcg gtggcgagct actcctcgac tctgcggctg ccggcggccc
     5101 ggggcgaagt ccctgcctcg ctcaatgact tttcgaccag cgcccggctc agcgacagcg
     5161 cgctggccgc gatgctgcag cccggcgccg atcccgccgc tcctgacgtg cgcgcccgcg
     5221 tgatggcggt ccgctcgctc tcgtccaccg gcgaggccgg cgcctccgcc gggccggtgt
     5281 tcgacgacgt ccgccgccag ctcgattcgg tgctggtgct cgcgagccag ggacggggca
     5341 gcgacgccag cgggctggcc ttcgacgcct acatgacctt cgagaaggtg gagcggggag
     5401 tccgggccaa gaacgccggg ctcgccaaca cgctcgaggc cggctttgcg aacctgcgca
     5461 cccgcgccgc gggtggcggc accaccgacg agctccaggc cattcacacc cggctgctca
     5521 gcgacctcga gaacgccgag cgcacggtga gcgaccggct ctcgcccctc aacctcttca
     5581 cccagtcact catcctgctc ctccgcgaag gcctcgaggc aatactcgtg gtcggcgccc
     5641 tgatggcgtt ccttgccaag accggggcgg cgcatcgcaa gcgggacatt catgtcgggg
     5701 tcggggccgc gatcggcgcg agcctgctca ccgcggtact gctcgagacc atcttccagg
     5761 tgagccagag ccgtcaggag accctcgaag gggcggtgat gctggtggcc accgcgatgc
     5821 tcttctacgt gagctactgg ctgctctcca agatggaagt ggccaagtgg aacaagttcg
     5881 tgaaggggcg ggtgcaggac gccgtctcga gcggctcggc cctggcgctg gcctcggtgg
     5941 ccttccttgc ggtgtaccgc gaaggcttcg agaccgtgct cttctacaag gcgctcttcc
     6001 tcgccggctc gggcagtgcg ctcccggtct tcctcggaat ggccgtcgcc acggtgggac
     6061 tggcggtggt gtacctcgcc atcaaccgct acggggtccg gatccccctc aagcccttct
     6121 tcgggctcac cagcgccttc ctgtactaca tggcgttcgt cttcgcgggg aagggcatcg
     6181 ccgagctcca ggaaggcagc ctgatcggga cgaccgtgct cccctgggcg ccgcgcattc
     6241 ccgcgctcgg catctatccg accctcgaga gcctgtcgct gcaggcggtg ctggtgctct
     6301 tcctggtcgc gggtctggtg tggaccttcg tgatcgaacc gcgccggctc gccgtcacca
     6361 acgtcatggt gccggaacat cccgcccagt cggctccggt ggcggccacc atggtccacc
     6421 cgatggaacc gacgaccgag gtagacattc ttcgctcgct tgaccggatg gatgccgacc
     6481 tggccgagct tcgggccgag gtcgatcggc tccggagtct gctgcggaag ggcgcgcacc
     6541 ggacgggctg actgcggg
//
LOCUS       DATIFF010000114         1415 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1555793, whole genome shotgun sequence.
ACCESSION   DATIFF010000114 DATIFF010000000
VERSION     DATIFF010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1415
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1555793"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..194)
                     /locus_tag="VLD58_01735"
     CDS             complement(<1..194)
                     /locus_tag="VLD58_01735"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF013345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HSB53040.1"
                     /translation="MTSSLDTARAWVDIDLDALVANARTIIAACGGRLLPMVKANGYG
                     LGATAVARALEPLDPWGFGIA"
     gene            271..1044
                     /gene="mazG"
                     /locus_tag="VLD58_01740"
     CDS             271..1044
                     /gene="mazG"
                     /locus_tag="VLD58_01740"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF007113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HSB53041.1"
                     /translation="MVRDLRARCPWDRAQTRETLRPYLVEEVLELDHALGEGDPDEIR
                     GELSDLLLHLAFQLVIAEERGEFTSDQVAVDLEAKMRRRHPHLFDLGDAEPWERIKRR
                     ERRGRTLAGLVPTLPPLLRAYRLQERAAAVGFDWPDVNGPLRKLREELAEVEQELVPG
                     PAGPAPDQAADPNTPRPVPPDRLVDEIGDLLFTVVNLARKAGVQPGPALDRANRKFRD
                     RFEQVEALATVRGVDLGSAGLELLDRMWDEVKGAEAAPA"
     gene            complement(1060..>1415)
                     /locus_tag="VLD58_01745"
     CDS             complement(1060..>1415)
                     /locus_tag="VLD58_01745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HSB53042.1"
                     /translation="RPVFVYNYPKDVKAFYMKRNPDDPRTVLNNDCLAPEGYGEIIGG
                     SQREDDYDTLLARIHQQGLDPEAYRWYLDLRRYGTFVHSGFGLGLERTVAWICGLAHI
                     REAIAFPRQIHRLYP"
BASE COUNT          218 a          466 c          524 g          207 t
ORIGIN      
        1 gcgattccga acccccaggg atccagcggc tccagcgccc gcgccaccgc ggttgcgccc
       61 agaccgtagc cgttagcttt gaccatcggc agcaggcgac cgccacaggc cgcgatgatc
      121 gtacgcgcgt tggccaccag cgcgtccagg tcgatatcga cccaggcccg ggcggtgtcg
      181 agagatgagg tcatggttcg agccggcgcg aatctaatcg ggctcggggg ataaatgcaa
      241 gacaattcag cgcttggacg tgctcttgcg atggtcaggg atctccgtgc ccgctgtccc
      301 tgggaccggg cccagacccg cgagacgctc cggccgtacc tggtggagga ggtcctcgag
      361 ctggaccacg cgctgggcga aggcgacccg gacgagatcc ggggcgagct cagcgacctg
      421 ctcctccatc tggccttcca actggtgatc gccgaggagc gcggggagtt cacttccgac
      481 caggtggcgg tggacctgga ggcgaagatg cgccgccggc atccgcactt gttcgacctc
      541 ggggacgcgg agccgtggga gcggatcaag cggcgcgagc gccggggccg gaccctggcg
      601 gggctcgtcc ccaccctgcc gccgctgctc cgggcctacc ggctgcagga gcgagccgcg
      661 gcggtcgggt tcgactggcc cgacgtaaac gggcccctgc gcaagcttcg ggaggagctg
      721 gccgaggtgg agcaggagct ggtgccgggc ccggccggcc cggcgcccga ccaggcggcc
      781 gacccgaaca ccccgcggcc ggtgccgccg gatcgcctgg tcgacgagat cggcgatctc
      841 ctgttcaccg tggtgaatct ggcccggaag gcgggggtgc agcccggacc ggcgctggat
      901 cgcgccaatc ggaagttccg ggaccggttc gagcaggtgg aggcgctggc taccgtgcgg
      961 ggcgtggatc tcggctcggc cgggctggag ctgctcgacc gcatgtggga cgaggtgaaa
     1021 ggcgccgaag cggccccggc ctgagcgccg caccggggct cagggataga ggcgatggat
     1081 ctgccggggg aatgcgatcg cctcgcggat gtgcgccaga ccgcagatcc acgcgaccgt
     1141 acgctcaagg ccgagcccga acccggagtg cacgaaggta ccgtaacggc ggaggtcgag
     1201 ataccagcgg taggcctcgg ggtcgaggcc ctgctggtgg atccgcgcca gcagcgtgtc
     1261 gtagtcgtcc tcccgctggg accccccgat gatctcccca tacccttccg gcgccaggca
     1321 gtcgttgttc aggaccgtcc gggggtcgtc tgggttccgc ttcatgtaga acgccttgac
     1381 gtccttgggg tagttgtaga cgaacaccgg ccggt
//
LOCUS       DATIFF010000115         1115 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2171632, whole genome shotgun sequence.
ACCESSION   DATIFF010000115 DATIFF010000000
VERSION     DATIFF010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1115
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2171632"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1115
                     /locus_tag="VLD58_01750"
     CDS             <1..>1115
                     /locus_tag="VLD58_01750"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HSB53043.1"
                     /translation="TWLRFAYSLGVDYSGDSRLQGEPQTSSNTPDPLGQVVKVDLTNA
                     QIDHNLTGTVTYKAGPSFGGTFTLGQNLNTRSVRQLGGVGNALLAPQPYTLTNTASQL
                     PPIDNETKLRIAGYFAQATFDMWDQVYLKGGLRYDGASSFGINTQHAWFPSASAAWQF
                     TKATGEGGLLSYGKLRAAYGEVGTQPQPYLTAFTFLSGGLYQDGWSGTLTASQNGFGG
                     LFSDTTQAGQLKPERTREFEAGVDLGLFRDLADFSFTWYRRSSKDVILTVPVAASTGF
                     INQAANVGQIRNSGTEWSLNIRPITRKNFAWDLGFQFATNRNKVLNLGTADTSFFISY
                     GGAGGFAIGTAQVGQPIGVFRDYDYIRCGRGLTVFDG"
BASE COUNT          195 a          408 c          348 g          164 t
ORIGIN      
        1 cacgtggctc cggttcgcct acagcctggg cgtcgattat tcgggagaca gccggctgca
       61 gggcgagccc cagacctcgt ccaacacgcc cgacccgctg ggccaggtgg tgaaggttga
      121 cctcacgaac gcccagatcg accataatct gaccggcacc gtcacctaca aggcgggacc
      181 gagcttcggc ggcacgttca ctctggggca gaacctcaac acccgcagcg tgcgccagct
      241 cggcggcgtg ggcaacgcgc tcctcgcgcc ccaaccgtac acgctcacca acacggcgag
      301 ccagctcccg ccgatcgaca acgagaccaa gctgcggatc gcggggtact tcgcgcaggc
      361 cacgttcgac atgtgggatc aggtctacct gaagggcggg ctccgctacg acggcgcctc
      421 gagcttcggg atcaacaccc agcacgcatg gttcccgagc gcgagcgctg cgtggcagtt
      481 caccaaggcc accggcgagg gcggcctgct cagctacggc aagctccgcg cggcctacgg
      541 cgaggtgggc acccagcccc agccgtacct gaccgcgttc acgttcctga gcggcggcct
      601 ctaccaggac ggctggagcg gcacgctcac cgcctcccag aacgggttcg gcggcctctt
      661 cagcgacacg acccaggccg gccagctcaa gccggagcgg acccgcgagt tcgaggcggg
      721 cgtcgatctc ggcctgttca gggatctggc cgacttcagc ttcacctggt accggcgcag
      781 ctcgaaggac gtgatcctca ccgtgccggt cgccgccagc accggcttca tcaaccaggc
      841 cgccaatgtg ggccagatcc ggaactcggg caccgagtgg tcgctcaata tccggccgat
      901 cacccgcaag aatttcgcgt gggacctggg cttccagttc gccaccaacc gcaacaaggt
      961 gctcaacctc ggcaccgccg acacctcgtt cttcatcagc tacggtggcg cgggcggctt
     1021 cgccatcggg accgcccagg tcggccagcc gatcggcgtg ttccgggact acgactacat
     1081 ccgctgtggc cgcggcctga ccgtcttcga cggcg
//
LOCUS       DATIFF010000116         1256 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_632816, whole genome shotgun sequence.
ACCESSION   DATIFF010000116 DATIFF010000000
VERSION     DATIFF010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1256)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1256)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1256
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_632816"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..417
                     /locus_tag="VLD58_01755"
     CDS             <1..417
                     /locus_tag="VLD58_01755"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HSB53044.1"
                     /translation="EDLPPVLRTLTDQFWIGPGRSAPIGYHVAHLAGSLDRLFTYARG
                     EGLSPEQQLALAAERTITETRPQPPELLALLTGRLDGAVRELASVPEASLLAPREVGR
                     ARLPSTTLGLLFHAAEHTARHAGQILTLTRVVRGEP"
     gene            793..1173
                     /locus_tag="VLD58_01760"
     CDS             793..1173
                     /locus_tag="VLD58_01760"
                     /inference="COORDINATES: protein motif:HMM:NF022317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2784 domain-containing protein"
                     /protein_id="HSB53045.1"
                     /translation="MLYRLGADLLVLLHLAFVVFVALGGLLILRWRRAAWIHVPAALW
                     GVMSEWAGIICPLTPLENSLRERGGQAGYAGGFIDHYLLPALYPPGLTPRIQFVLGLG
                     ALVVNLLIYGWIFGHRRSTHDQPS"
BASE COUNT          189 a          458 c          401 g          208 t
ORIGIN      
        1 gaagacctgc cacccgtact gcggacgctt acggaccagt tctggattgg tcccgggcgg
       61 tccgcgccca tcgggtacca tgtcgcgcac ctggccggga gcctggaccg cctgttcact
      121 tacgcccgcg gagaaggact ctcacccgag cagcagttgg cgctcgcggc cgagcggacg
      181 atcaccgaga ccaggcccca gccgcccgag ctgctggcgc tcctcacagg ccggctggat
      241 ggcgctgtgc gggagctcgc ctctgttccg gaggcttcgc tgctggcacc gcgcgaggtc
      301 ggcagggcgc gactgccctc gaccacactc ggactgctgt ttcacgccgc ggagcacacg
      361 gcccgccacg ccggtcagat tctgaccctg acccgggtgg tgcggggcga gccgtaagga
      421 aggttcttcg taccggtcga gattgccggt gaacggggcg ccgagcggaa gtgtcaggcg
      481 cccgccactc caccgtctgg ccaggaggtc ggaatgaacg ccgaatggca ccaacgccac
      541 cccatgccac gcaatccctc cctggcgcag cgcgtgtcct ggcatcgcga ccaccagcgg
      601 cactgcggat gcagcccggt gccggccaac atccggccgt tcctccactc ccgcggaggc
      661 aagcgccgcc gggttcgctc ctgaggattc acccgccgtc gcacaggcac cggcccgtac
      721 tgcagaccgt tcgatccggc aggcgggcca cggacgaggc tcgccgaggt ccatgatgga
      781 gcgtcggcca ccgtgctata tcgcctaggc gctgacctgc tcgttctcct ccacctcgcc
      841 ttcgtggtgt ttgtggccct cggcggtttg ctgatcctgc gctggcgccg cgccgcctgg
      901 atccacgttc cggccgcgct ttggggagtc atgagcgaat gggccgggat catatgcccg
      961 ctcaccccgc tcgagaacag tctccgcgag cgcggcggcc aggccgggta tgcaggcggc
     1021 ttcatagacc attatctcct ccccgccctc tatccccccg gcctcacacc gcgcatacaa
     1081 ttcgtgctgg ggctcggcgc cctcgtggta aacctcctga tctatggctg gatattcggc
     1141 caccggcgtt caactcatga ccagccttcg tgacagggaa gcccggactc ccgccgatcg
     1201 gctccacgag ctgctcttcg gcgatacccc gaccgaggaa tgggccggag acggtg
//
LOCUS       DATIFF010000117         7418 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1555933, whole genome shotgun sequence.
ACCESSION   DATIFF010000117 DATIFF010000000
VERSION     DATIFF010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7418
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1555933"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..497)
                     /gene="pyrF"
                     /locus_tag="VLD58_01765"
     CDS             complement(<1..497)
                     /gene="pyrF"
                     /locus_tag="VLD58_01765"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:TIGR01740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HSB53046.1"
                     /translation="MSEIIIALDLPADDARRLLDRIPEARWVKVGSILFAAEGPALIR
                     ELSRRGLKVFLDLKWHDIPNTVAGAVEAARALGIAMATVHTLGGRAMMEAAARAAGSE
                     VGIVGVTVLTSHTAEAYGRAVGRGGVVVLDEVSRLATEALASGLRGIVCSPLEVGAVR
                     SVAGS"
     gene            complement(490..1362)
                     /locus_tag="VLD58_01770"
     CDS             complement(490..1362)
                     /locus_tag="VLD58_01770"
                     /EC_number="1.3.1.14"
                     /inference="COORDINATES: protein motif:HMM:NF005574.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HSB53047.1"
                     /translation="MPRDLARSVFGQTFQNPVLLAAGTAGFGREVAGVIDVERLGGII
                     TKAVSREPRPGNRSPRVAEFAGGMLNSVGLANPGLARVREEQIPWLAANLKRPRVLVN
                     VVGFEEEHFAEVVGGLADAAGITAFEINLSCPNTHAGGMEFGADPATAAKVIELCRAR
                     TTLPLIAKLSPALPDIAGMAMAVRTAGADGVSVVNTMPGYLEREDGQPRLGNGNGGVS
                     GPALLPVGVLAVRKIMQKSGGMPVIGVGGIRDADDARQYLHAGAALVAIGTAAMVRPR
                     IPEEVVAELEAHGV"
     gene            complement(1362..2771)
                     /locus_tag="VLD58_01775"
     CDS             complement(1362..2771)
                     /locus_tag="VLD58_01775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53048.1"
                     /translation="MRRAILCLALLVVGGCSYYNGMYNTKRLAGRARKAEKEGRTFDA
                     TSLWGQVGVRAESVLAQHPTSKWTDEARLLQATSMSRLRDCASALRPLETLVITSRNP
                     AIVEEANLLLGNCRTTLGDPAGAADAYGRLVGSKDPERRRLALFAHGRAQRIQGNFET
                     ALEELAGTNYPGTRGERAAALAGLGRLDEATLLLDSLLADRDTLVPWDSLLAGAARHD
                     PEAASKLTDRIVAESGVPLPVRCRLLVADAVRWRPTDRARSDARLAQMERLSARSLQA
                     ADARMAALRLEVEEVDSLPELIAWASRAEDLAEGTGQVGPVALQLAGQARRVILAADS
                     VAAGAPNGELRLFLAGEIARDSLGANRLAARQFRRIAAEWPQSPFAAKALLALIPLEP
                     SGADTVRQRLSTTYAASPYLAMIENGASAEYQVLEDSLFRFSVNFRPGARRPGVQNVR
                     PQNPAPAPAPAAPREPVNR"
     gene            complement(2768..4000)
                     /locus_tag="VLD58_01780"
     CDS             complement(2768..4000)
                     /locus_tag="VLD58_01780"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HSB53049.1"
                     /translation="MALCALAGPAPSSARAFPARVPLVVTVTTARGEMRLPVRVDPAA
                     GPAISGEGLVRALSGGVLTDVPWVEVTLSRQSFRFLLGAPILSFNDRLQPLAGWAFRS
                     RDSVFLPLQFVSEILPDVLSERYEWNPATASLKETAPPLQPVASATPKPAPRGPGRLP
                     NGLLPGHVVTVDAGHGGIDPGNPGVYFPRGVNEKHVTLQVALLLRKELKERGIQVVMT
                     RTTDTLIGLLDRGRYCTEDCDLFVSLHVDALPASARRKYGDIDGFHTIIIGEQNTEDA
                     DRIARMENDALRFEGDTAAESGEGLDFILRNLQLNEYLRESARAAELVQSEVGKVHTG
                     TNRGVKQSRVLAVLNTARRPAILVEMGFSTNPRDARLLTSRKSQESMASAIADAIVEY
                     LLEYERKTGSGSAGGKGR"
     gene            complement(4030..4521)
                     /gene="smpB"
                     /locus_tag="VLD58_01785"
     CDS             complement(4030..4521)
                     /gene="smpB"
                     /locus_tag="VLD58_01785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003564285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HSB53050.1"
                     /translation="MAQPRKPAPDDEGKESVARNPKATHDYHILETWEAGLVLTGTEV
                     KSLRAKKVSIKEGFARVANDEVFLEGINITPYEQGNRYNHDPVRTRKLLLHKKEIQRL
                     IGAVEQKGLTLVPLELYFRNGVAKVKLALGRGKKQHDRREDLKKRDAEREVARALSQR
                     GRV"
     gene            complement(4665..4748)
                     /locus_tag="VLD58_01790"
     tRNA            complement(4665..4748)
                     /locus_tag="VLD58_01790"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4712..4714),aa:Leu,seq:cag)
     gene            complement(4856..5314)
                     /locus_tag="VLD58_01795"
     CDS             complement(4856..5314)
                     /locus_tag="VLD58_01795"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HSB53051.1"
                     /translation="MRITTWTEYSLIIALHLAKRGASGAGPVAAREIAENERLPGDYV
                     EQILLRLRRAGLVESVRGAKGGYFLAKEPANISMRDIMTASEHQTFEMNCESHPVDPE
                     RCRPGAGCTIRPVWFALQQRVDELLSSISLADLLKEETQVQELVSIAPAT"
     gene            complement(5363..6781)
                     /locus_tag="VLD58_01800"
     CDS             complement(5363..6781)
                     /locus_tag="VLD58_01800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HSB53052.1"
                     /translation="MTTRIEKDPLGEKAVPNDALYGIQTVRAVENFPISGLRPLPAFV
                     DAVIWIKRSAALTHKETGRLDAKRADAIVTAADEILAGKHREQFVVDVYQAGAGTSHN
                     MNCNEVLANRATELLGGKRGEYEMVHPNDHVNMAQSTNDVIPTAMRLAALATMPALLG
                     AMDRLAAAFLERGKAFDHIIKSGRTHLQDATPIRLGQEFAAYGHTVARHRDKLAQAAD
                     WLRELGIGGTAVGTGINAEPVYPALMVKYLQQVSGLELRAGSDRVQLMQSMGDIATLS
                     GAFRAWVLDLNKIANDIRLLASGPRTGLAEIMLPAVQPGSSIMPGKVNPSIAEMVNQV
                     CYQALGLDTTVALAAEAGQLELNVMMPVITHNIVFGLTIVANATRVLAERCVAGIEAD
                     EKLCAYWLERSPALVTALAPKIGYAESAKLAKEAIATGLTVKELVVKKDLLKGKELEE
                     VLDLRAMTELGVPGGKGIPGGG"
     gene            6851..7171
                     /locus_tag="VLD58_01805"
     CDS             6851..7171
                     /locus_tag="VLD58_01805"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSB53053.1"
                     /translation="MKELFTSVAAQARFGPEKATKTDLFRGSHLFAGLNCFETGQRQP
                     VHVHEKADKFYFVVSGKARITVGDETRVVGAGELVWASAGLPHGVEEVLERTVMLVAI
                     APGP"
     gene            complement(7179..>7418)
                     /locus_tag="VLD58_01810"
     CDS             complement(7179..>7418)
                     /locus_tag="VLD58_01810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53054.1"
                     /translation="PVLSVDAGGVADRVRESGAGALYAPADIQACAEAAITLLRGDLA
                     GLGRTARAFAERHHGYRQAFDGIFSVYRKVLARQG"
BASE COUNT         1191 a         2493 c         2537 g         1197 t
ORIGIN      
        1 tccgatcccg caaccgaccg gaccgccccc acctcgagcg gtgagcagac gataccccga
       61 aggccggagg caagcgcctc ggttgcgagc cggctcacct catccagcac caccaccccg
      121 ccccgcccga ccgcgcgacc ataggcctcc gcggtatggg aggtcagcac cgtcaccccg
      181 acaatcccga cttcgctccc cgccgcacgg gccgccgcct ccatcatggc acggccgccg
      241 agggtgtgca ccgtcgccat ggcaataccg agtgcccgtg cagcctcaac ggcccccgcc
      301 acggtattcg ggatgtcatg ccatttgaga tccaggaaga ccttgagccc gcgccggctc
      361 agttcccgga tcagcgccgg accctccgcc gcgaagagga tcgagccgac cttcacccac
      421 cgggcctcgg gaatccggtc gagcagccgg cgggcgtcgt ccgccgggag atccagggcg
      481 atgatgatct cagacaccgt gcgcctccaa ctcggccacc acctcttcag gaatccgggg
      541 ccggaccatc gcggcggttc cgatcgcgac gagcgcggcg ccggcatgca gatactggcg
      601 cgcatcgtcg gcatcgcgga ttccgcccac cccgatgacg ggcatcccgc cagacttctg
      661 catgatcttc cgcaccgcca ggaccccgac cgggaggagc gctggtccgc ttacaccgcc
      721 gttcccgttc cccagccgcg gctggccatc ttcccgttcg aggtatcccg gcatggtgtt
      781 caccaccgag actccgtcag ctcccgcagt gcgcaccgcc atggccatcc cggcgatgtc
      841 cgggagggcc ggtgaaagct tggcgatcag gggaagagtg gtgcgtgccc ggcagagttc
      901 gatcaccttg gcggcggtcg cggggtcggc gccgaactcc atgcccccgg cgtgggtgtt
      961 ggggcaggag agattgatct cgaatgccgt gatcccggcg gcgtcggcga gaccgcccac
     1021 cacctcggca aaatgctcct cctcgaagcc aaccacgttc accagcaccc gcggccgttt
     1081 gagattggcc gccagccagg gaatctgctc ctcccgaacc cgggcgagcc ccggattggc
     1141 gagcccgacc gaattgagca tcccgccggc gaactccgcg acccggggcg accggttccc
     1201 ggggcggggc tcgcgcgaga ccgccttggt gatgatcccg ccgaggcgtt cgacatcgat
     1261 cacgccagcg acctcgcggc caaagcccgc ggtgccggcg gcaagaagaa caggattctg
     1321 gaaggtctgg ccgaagacgg aacgggcgag atcccggggc actagcggtt caccggttca
     1381 cgaggcgcgg cgggagccgg ggccggagca gggttctgcg gccgcacatt ctgcacgccc
     1441 gggcggcgcg ctcccggacg gaagttgacg gagaaccgga acagcgagtc ttccagcacc
     1501 tggtactcgg ccgaggcgcc attctcgatc atggcaaggt agggactcgc cgcgtaggtg
     1561 gtgctcagtc gttgccgcac cgtgtcggcg ccggacggct cgaggggaat cagggcgagc
     1621 agcgccttgg cagcgaacgg cgactggggc cattcggcgg cgatccggcg aaactgccgc
     1681 gcggccagcc gattggcacc gagcgagtcg cgggcgattt cgccggcgag gaagagccgg
     1741 agttcaccgt tgggggcgcc ggcggcgacc gaatcagccg cgagaatgac ccggcgtgcc
     1801 tggccagcca gctgcaacgc caccggcccc acctggccgg taccctcggc gagatcctcc
     1861 gcgcgggagg cccaggcgat gagttccggc aacgagtcca cctcctcgac ctccagccgg
     1921 agcgcggcca tccgagcgtc ggccgcctgc agactccgtg cggagagccg ctccatctgc
     1981 gccagtcgag cgtcgctccg ggcccggtcg gttgggcgcc agcggacggc atcggcgacg
     2041 agaagccggc agcggaccgg caggggaact ccactctcgg ctacgatccg gtccgtaagc
     2101 ttcgaggccg cctccggatc gtgccgggcg gcgccggcca ggagcgaatc ccatggcacc
     2161 agggtgtcgc ggtccgcgag cagcgagtcg agcagcaggg tggcctcgtc gaggcgtccc
     2221 agtcccgcca gcgcggcggc ccgctcaccc ctggtaccgg ggtagttggt cccggcgagt
     2281 tcctcgaggg cggtttcgaa attgccctgt atccgttggg cccggccgtg tgcgaagagg
     2341 gccagacgcc gtcgctcggg atccttgctg ccaaccaggc gcccgtaggc gtcagcggcg
     2401 ccggcagggt cgccgagggt agtgcggcag ttgccgagca gcaggttggc ttcctcgaca
     2461 atcgccggat tcctgctggt gatcaccagg gtctcgagcg gacggagggc cgaagcgcag
     2521 tcgcgcagcc gggacatcga ggtagcctgc aacagccggg cttcatcggt ccatttgctg
     2581 gtggggtgct gggcgaggac tgactccgcc ctcaccccga cctgtcccca gaggctggtg
     2641 gcatcgaagg tccggccttc cttctcggcc ttccgcgccc ggcccgcgag gcgcttggtg
     2701 ttgtacatgc cgttgtagta ggagcagcct cccactacca gcagcgcgag gcagagaatc
     2761 gcccgcctca ccgtcccttc cctcccgccg acccggagcc ggtcttgcgc tcgtactcga
     2821 gcagatactc gacgatggcg tcggcgatgg cgctggccat cgattcctgc gacttgcggc
     2881 tggtgaggag ccgggcatcg cgcgggttgg tggagaagcc catctcgacc aggatcgcgg
     2941 ggcgccgggc ggtattgagc accgcgagca cccgcgactg cttcaccccg cgattggtgc
     3001 cggtatgcac cttccccacc tcggactgca ccagctcggc ggcgcgggcc gattcccgca
     3061 ggtactcgtt gagctggagg ttcctgagaa tgaagtccag cccttcgccc gattcggcgg
     3121 cggtgtcgcc ctcgaagcga agggcgtcat tctccatccg ggcgatgcgg tcggcatcct
     3181 cggtgttctg ctcaccgatg atgatggtgt ggaatccatc gatgtcgccg tacttgcgcc
     3241 gggcggaggc gggaagggcg tcgacgtgaa ggctcacgaa gaggtcacaa tcttccgtgc
     3301 agtagcggcc ccggtcgagg agaccgatca gggtgtcggt ggtgcgggtc atcaccacct
     3361 ggatgccgcg ctccttgagt tccttgcgga gcagcaacgc cacctggagg gtgacgtgct
     3421 tctcgttcac cccacgaggg aagtagacgc cgggattgcc gggatcgatc ccgccgtggc
     3481 cagcatcgac tgtcaccaca tgacctggga gaagcccgtt gggcagccgg ccaggtccac
     3541 ggggagccgg cttgggcgtg gcggaggcca ccggctggag cggcggggcg gtttccttga
     3601 ggctcgcggt ggccgggttc cactcgtacc gctcgctcag cacatcgggc aggatttccg
     3661 agacgaactg gagcgggagg aagaccgagt cacgggagcg gaaggcccat cccgccaggg
     3721 gctggagccg gtcgttgaac gagaggatcg gggccccgag caggaagcgg aaggactggc
     3781 gggagagcgt cacctcgacc cacggcacgt cggtcagcac cccgccgctc agcgcccgga
     3841 cgaggccttc cccggagatg gcggggccgg ccgcgggatc gacccgcacc gggagacgca
     3901 tctctccccg ggcagtggtc acggtgacca cgagcggcac ccgcgcgggg aacgcgcgcg
     3961 cggacgaggg ggccgggccg gccagggcac aaagagccat gcccgcgtag acgccccgcc
     4021 agcgcggcat cacacacgcc cccgctggga gagcgcccgc gcgacttcgc gttccgcgtc
     4081 ccttttcttg agatcttcgc ggcggtcgtg ctgcttcttg ccgcgtccga gtgccagctt
     4141 caccttcgcc acgccattcc tgaagtagag ttccagcggc accagggtga ggcccttctg
     4201 ctccaccgcg ccgatgaggc gctgaatctc cttcttgtgg agcaggagct tccgggtccg
     4261 caccggatca tgattgtagc ggttgccctg ttcgtagggt gtgatgttga tcccttcgag
     4321 gaatacttca tcgttcgcca cccgggcaaa cccctccttg atcgagacct tcttggcccg
     4381 aagcgatttc acctcggtgc cggtcaggac cagtcccgcc tcccacgtct cgaggatgtg
     4441 gtagtcgtga gtcgccttgg ggtttcgggc gacggactcc ttgccttcat cgtccggggc
     4501 gggtttgcgt ggttgagcca tcgtaaagcg aagatagaca gggggttgga actagagaag
     4561 gcttggggct tggggcttgg ggcttggggc ttggggcttg gggcttgggg ctgaaagaaa
     4621 aacaaccggc cggggaaaga gcccggccgg cgttgatgct ggagtgccga aggggggact
     4681 cgaaccccca cgggcttgcg cccactgcgc cctgaacgca gcgcgtctac cagttccacc
     4741 acttcggcgt ggggggacaa actaccgatg ccgcagggct tgcgtcaact ctacgcgctg
     4801 caacgcaaag gcccggcgaa agcgccgggc cgagggaacg cggtcgccga tcggctcagg
     4861 tggccggggc gatggagacg agttcctgga cctgggtctc ctccttgagg agatcggcca
     4921 gggagatgct gctgagaagc tcatcgaccc gctgctgcag tgcgaaccag accgggcgga
     4981 tggtgcagcc ggcgccgggg cggcaccgtt cggggtccac cgggtgcgac tcgcagttca
     5041 tctcgaaggt ctggtgttcc gatgccgtca tgatgtcgcg catcgagatg ttcgccggct
     5101 ccttcgcgag gaagtagccg cccttggcgc cccgcacact ctcgaccagc ccggcacggc
     5161 gcagccgcag caggatctgt tcgacatagt caccgggcag ccgttcgttc tcggcgattt
     5221 cccgggcagc gaccgggccc gcgccggagg ccccgcgctt ggccaggtgg agcgcgatga
     5281 tcaggctgta ctcagtccag gttgtgatcc gcatacgtgt ccaatctgcc gtcgtggcac
     5341 agtgcaggca agaaatcgtg aatcatcctc ccccaggtat tcctttcccc ccgggcacgc
     5401 cgagttcggt catggcccgc aggtcgagca cttcctcgag ctccttccct ttgaggagat
     5461 ccttcttgac gaccagctcc ttgacggtga ggccggtcgc gatcgcctcc ttcgccagct
     5521 tggccgattc ggcgtagccg atcttcggcg ccagggcggt gaccagcgcc gggctccgtt
     5581 cgagccagta ggcgcagagc ttctcatccg cctcgattcc cgccacgcac cgctcggcca
     5641 gcacccgggt ggcattggcc acgatggtga gcccgaagac gatgttgtgg gtgatgaccg
     5701 gcatcatcac attgagctcg agctggccgg cttcggccgc aagcgccacc gtggtatcga
     5761 gcccgagcgc ctggtaacag acctggttca ccatctcggc gatcgaaggg ttcaccttcc
     5821 ccggcatgat gctcgagcca ggctgcaccg ccgggagcat gatctccgcc aggccggtcc
     5881 gcgggccgga ggcgaggagc cggatgtcgt tcgcgatctt gttgagatcg aggacccacg
     5941 ctcggaacgc gccactcagc gtcgcgatgt cgcccatcga ctgcatcagc tggacccggt
     6001 cgctcccggc ccggagctcg agcccgctca cctgctgcag gtacttcacc atcagcgccg
     6061 gatacaccgg ctcggcgttg atgccggtgc ccaccgcggt gccgccgatg ccgagctcgc
     6121 ggagccagtc ggccgcctgg gcgagcttgt cacggtgacg ggccaccgtg tggccgtagg
     6181 cggcgaactc ctgtcccagc cggatcggag tggcatcctg gaggtgagtc cgacccgact
     6241 tgatgatgtg gtcgaacgcc ttgccccgct ccaggaacgc cgccgccagc cgatccatcg
     6301 cgccgagcaa tgccggcatc gtcgccagcg cggcgagccg catcgccgtc gggatcacgt
     6361 cattggtgct ctgcgccatg ttgacgtgat cattgggatg caccatctcg tactcgcccc
     6421 gcttcccgcc caggagctcg gtggcccggt tggcgaggac ttcgttgcaa ttcatgttgt
     6481 ggctggtacc ggcgccggcc tggtacacgt cgaccacaaa ctgctcgcga tgtttccccg
     6541 ccaggatctc gtcggccgcg gtgacgatgg catccgcccg cttcgcgtcc agccgcccgg
     6601 tttccttgtg cgtcagcgcc gccgagcgct tgatccagat gaccgcatcc acgaaggccg
     6661 gcaggggccg aagcccggag atcgggaaat tctcgaccgc gcgaaccgtc tggatgccat
     6721 agagcgcatc gttgggaacg gccttctcgc ccagcggatc cttctcgatt cgggtggtca
     6781 tgcgcgattg gagttcggtg aagagtgaat aaacatgtcg aatcaacggt gaagggaagg
     6841 aatcgagagt atgaaagagt tatttacctc ggtggcggcc caggcccggt tcggcccgga
     6901 gaaggccacc aagaccgacc tcttccgggg gagccacctc ttcgcggggc tcaactgctt
     6961 cgagacgggg cagcggcagc cggtccacgt tcatgaaaag gcggacaaat tctacttcgt
     7021 cgtctcggga aaggcgagga tcacagtcgg agatgagacg cgagtggtcg gtgcggggga
     7081 gctggtctgg gcgtcggcgg ggttacccca cggagtagag gaggtgctgg agcggacggt
     7141 gatgctggtg gcgattgcgc ccgggccatg aggagcgctc acccttgccg tgcgagcacc
     7201 ttgcggtaga ccgaaaagat cccgtcgaat gcctgacggt agccgtgatg ccgctccgcg
     7261 aaggcccggg ccgtccggcc gagcccggcg agatcgccgc gcaggagggt gatcgccgct
     7321 tcggcgcagg cctggatgtc cgccggggcg tacagcgccc ctgccccgga ctcgcgtacc
     7381 cggtcagcca ccccacccgc gtcgaccgag agcaccgg
//
LOCUS       DATIFF010000118         3002 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1402517, whole genome shotgun sequence.
ACCESSION   DATIFF010000118 DATIFF010000000
VERSION     DATIFF010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3002
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1402517"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1234
                     /locus_tag="VLD58_01815"
     CDS             <1..1234
                     /locus_tag="VLD58_01815"
                     /inference="COORDINATES: protein motif:HMM:NF028259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53055.1"
                     /translation="VIVLAAFIPFLLLPAVVGSTLTLLLVNVVPARRAKELLSLVAIG
                     AVGGVALLLRLAQPELLVRPEGFRSLAEFVRMLQTPTNPLLPSEWAMRILMNWLLRVA
                     DPMPVAALWGATAVALVGGGVLFRWRYRHAFSKAQEGAAATGGGRGWAAVLGPLLGRL
                     PADRREFILKDARLFFRDPTQWSQLILLGVLVVVYLFNIQALPLFSGERVPATVVTLV
                     VFLNLGLAGFVLAAIAARFLFPSVSLEGRQMWLLRSSPLDLRSMLWSKYWIGTLPLLL
                     LALLITTVTNLILRASPFMTLVSELTMVLFTLAASALALSFGAFYPRFDSENAAQIPT
                     SFGGLVYMMASVLLLAFVITLEAPAVAAQVQAEQAGVSVRWDAGLLVPLAAAAVLCFA
                     ATLLPLRLALARMERLEF"
     gene            complement(1288..1749)
                     /locus_tag="VLD58_01820"
     CDS             complement(1288..1749)
                     /locus_tag="VLD58_01820"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HSB53056.1"
                     /translation="MKVATLTPTVGKMRNEIDKVFDRFFTAPFLGEPLAFPLEPMREY
                     GAEWMPVLDLAETPKEYVVRLEAPGIHKENLDINLTGNVLRITGHREAVQEGKDETYL
                     YREREVGKFARVVRLPVPVEGGKIDAAFQDGILTIRLPKVEAAVAKKILIK"
     gene            complement(1820..2413)
                     /locus_tag="VLD58_01825"
     CDS             complement(1820..2413)
                     /locus_tag="VLD58_01825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53057.1"
                     /translation="MAVGGAAVLGIVLVTLVRKERAQAPPSSPAAALAAEPPTGAPPD
                     ISAMSPRERFDRLYNRIMTAAESGDEATVTRFTPMALMAYAQLPDLDADARYHAALLK
                     VHTGDAAGALALADTILAGNPGHLFGYVVRATVARWQKDDKALSAAYAGFLGHYDAEM
                     KAGRTEYAEHTRALDEFRKAAQEAKPTAQSGKPAGSK"
     gene            complement(2674..>3002)
                     /locus_tag="VLD58_01830"
     CDS             complement(2674..>3002)
                     /locus_tag="VLD58_01830"
                     /inference="COORDINATES: protein motif:HMM:TIGR00072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="hydrogenase maturation protease"
                     /protein_id="HSB53058.1"
                     /translation="RLILLDAVNAGLPPGTPVVLERPDLPRYFALKLSPHQIDLREVL
                     ALAELRGTLPLEVVAIGAQPGRLELDTELSPPLAQRVGEVAALAAARLERWGYRCRRI
                     AGVVPA"
BASE COUNT          410 a         1043 c         1030 g          519 t
ORIGIN      
        1 ggtcatcgtc ctcgccgcgt tcatcccgtt cctgctgctg ccggcggtcg tcggcagcac
       61 gctcacgctg ctcctggtga acgtcgtgcc ggcccggcgg gccaaggagt tactgagcct
      121 cgtcgcgatc ggggcggtcg gcggcgtggc gctcctgctg cggctcgcgc agcccgagct
      181 gctggtccgg ccggaaggct tccggtcgct ggccgagttc gtgcgcatgc tccagacgcc
      241 caccaatccg ctgctgccga gcgaatgggc catgcggatc ctgatgaact ggctgctccg
      301 ggtcgccgac ccgatgccgg tggcggcgct gtggggggct acagcggtcg cgctcgtggg
      361 cggcggcgtg ctgttccggt ggcggtaccg tcacgccttt tccaaggccc aggaaggagc
      421 cgcagctacg ggcggggggc ggggctgggc ggcggtgctc ggcccgctgc ttggccggct
      481 tcccgccgac cggcgcgagt tcatcctcaa ggatgcccgg ctcttctttc gcgaccccac
      541 ccaatggagt cagctcatcc tgctcggcgt cctggtcgtc gtgtacctgt tcaacatcca
      601 ggcgcttccg ttgttttccg gcgagcgagt gcccgcgacc gtcgtgacac tggtggtctt
      661 tctcaatctc gggctcgccg ggttcgtgct cgcggcgatc gcggcgcggt tcctgttccc
      721 ctcggtctcg ctcgagggcc gtcagatgtg gctcctgcgc tcgagcccgc tcgacctccg
      781 ctcgatgctc tggagcaagt actggatcgg gacgctgccg ctgctgctcc tcgccctgct
      841 gatcaccacc gttacgaacc tcatccttcg ggcgtcgccc ttcatgacgc tggtgagtga
      901 gctcaccatg gtgctcttta cactggcggc gagcgcgctg gcgttgagct tcggcgcgtt
      961 ctacccccgg ttcgacagcg agaacgccgc ccagattccg accagcttcg gcgggctggt
     1021 gtacatgatg gccagcgttc tcctgctggc gttcgtcatc acactggaag cgccggcggt
     1081 ggccgcccag gtccaggccg agcaggcagg ggtgagcgtg cggtgggacg cagggctcct
     1141 ggtgccgctc gcggcggcgg ccgtgctgtg cttcgccgcg acgctcctcc cgcttcggct
     1201 cgcactggcc cgaatggagc gcctcgagtt ctgaaacaat gaaagcggcc ccggatgtcc
     1261 ggggccgctc ggggacgggc agaccagcta cttgatcagg atcttcttgg ccaccgcggc
     1321 ttcgaccttc ggcagccgga tcgtcaggat cccatcctgg aaagcagcat caatctttcc
     1381 gccctccacc gggacgggca gcctcactac ccgggcgaac ttgccaacct cgcgctcccg
     1441 atagagatac gtttcgtcct tcccctcctg gaccgcctcc ctgtggcccg tgatgcgaag
     1501 cacgttccct gtcaggttga tgtccaggtt ctccttgtga atgcccggcg cctcgaggcg
     1561 aaccacgtac tccttcgggg tctcggccag atcgagcacc ggcatccact ccgcaccgta
     1621 ctcccgcatc ggctcgagcg ggaacgcgag cggctcgccc aggaacgggg cggtgaagaa
     1681 ccgatcgaac accttgtcga tctcgttcct cattttgccg accgtcggcg tcagcgtcgc
     1741 gactttcatg gtatcctccc gtgagatgcg agacaatatg tcactcacgc catgaatgca
     1801 ccgtgaaagg ccgctgaaat tacttcgagc cagcaggttt cccgctttgg gcggtcggct
     1861 ttgcctcttg ggccgccttg cggaactcgt cgagagcccg ggtgtgttcg gcgtactcgg
     1921 tccggccggc cttcatctcc gcatcatagt ggcccaggaa cccggcatag gcggcggaca
     1981 acgccttgtc gtccttctgc caccgggcca ccgtggcgcg cacgacgtag ccgaacaggt
     2041 ggcccgggtt gcccgcgagg atcgtgtccg ccagcgcgag ggccccggca gcgtcgccgg
     2101 tgtgcacctt gagcagcgcg gcatggtagc gcgcatcggc gtccagatcg ggcagctggg
     2161 cgtaggccat gagcgccatg ggggtgaagc gggtgacagt ggcctcgtcg ccggattcgg
     2221 ccgccgtcat gatccggttg tacagccggt cgaaccgttc ccgcggcgac atcgcgctga
     2281 tgtcgggagg tgcgcccgtg ggcggctcgg cggccaatgc ggccgctggc gacgacggag
     2341 gcgcctgcgc gcgctccttc ctgaccagcg tgacgagcac gataccgagc accgccgcgc
     2401 cgcccacggc catggcagcg aggggccgcc gcgcggcagg gccggccgcc ggcccgccgg
     2461 cgccacctct tgcgagcgta ccgcactgcc cgcagaagcg ggagtcggcc gggacctccg
     2521 cgccgcaggc agggcacgcc cgcggtccga gcggagcgcc gcagctgttg cagaacttgg
     2581 ttcccgaccc gggggcaccg caggccgggc aacggggcgt agtcgacgtg gtcaagctgc
     2641 aaggatcctt tcgctcggga gacggtgtcc ggctcaggca ggcaccacgc cggcgatccg
     2701 ccggcaccga tagccccagc gctcgaggcg tgcggctgcc agtgccgcca cctccccgac
     2761 tcgctgggcc agcggaggcg acagctcggt gtcgagctcg aggcgcccgg gctgcgcacc
     2821 gatcgcgacg acctccagcg gcagcgttcc ccgcagctcc gccagggcca gcacctcccg
     2881 gaggtcgatc tggtgggggg agagcttaag cgcaaagtaa cgagggaggt ccggccgctc
     2941 gagcaccacg ggagtgccgg gcggcaggcc ggcgttcacg gcatccagca ggatgaggcg
     3001 gt
//
LOCUS       DATIFF010000119         1058 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1709954, whole genome shotgun sequence.
ACCESSION   DATIFF010000119 DATIFF010000000
VERSION     DATIFF010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1709954"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..206
                     /locus_tag="VLD58_01835"
     CDS             <1..206
                     /locus_tag="VLD58_01835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53059.1"
                     /translation="SECRRRSLALIAASLLMTAPLAAQTGTHPDSLLEHLIGTWVLEG
                     PMAGHQVIHDVTFALDPALTDFQ"
     gene            complement(226..>1058)
                     /locus_tag="VLD58_01840"
     CDS             complement(226..>1058)
                     /locus_tag="VLD58_01840"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HSB53060.1"
                     /translation="GAAAVPRARRPGAGLVVRVTVCELPHEPDALATAWAGLRQHTSR
                     HRSELVLLPEFAMVEPVWEEERFDQARWAAALARSDAWLQRLPELGAARVVGARPVTI
                     EGRPFNQGYLWSPAGGLTPLRRKFFLPDEPGNWEARWFDRGDPAFPAFRAGDLTFGLN
                     ICTELWALETYGAYVEQGVQVILSPRATAAATAAKWLSVGVVAAVRAGAFSVSSNRVD
                     PTGACGGMGWIISPQGQILAATSPEAPYATMDIDLGASTAARAGYPRYVFRGEGERPE
                     "
BASE COUNT          173 a          387 c          353 g          145 t
ORIGIN      
        1 gatccgaatg ccggcgaagg tcgcttgccc taatcgccgc ttcgctcctg atgacggcgc
       61 cgctggcggc gcagactggt acccacccgg actcgctgct cgagcatctg atcggcacct
      121 gggtgctcga gggaccgatg gccgggcacc aggtgattca cgatgtcacg ttcgcccttg
      181 acccggcgtt aacggatttc caatagacag tgtgcgtcgt ctcggctatt ccgggcgctc
      241 accctcaccg cggaacacgt agcggggata gccggcccgt gcggcggtcg aggcacccag
      301 gtcgatgtcc atcgtcgcgt agggagcctc gggtgacgtg gccgccagaa tctgaccctg
      361 cgggctgatg atccagccca tcccaccaca ggcgcccgtc gggtccaccc ggttggacga
      421 cacgctgaag gcaccggcgc gcacggcggc gaccacaccc accgacagcc acttggccgc
      481 cgtggccgcc gcggtcgcgc ggggcgacag gatgacctgc accccctgct cgacgtaggc
      541 tccgtacgtc tccagcgccc agagctcggt gcagatgttg agtccgaagg tcaggtcgcc
      601 ggcccggaac gccgggaacg cggggtctcc ccggtcgaac cagcgcgcct cccagttgcc
      661 cggctcatcg ggcaaaaaga acttgcggcg cagcggcgtc aggccgccgg ccggcgacca
      721 gaggtacccc tggttgaagg gtcggccctc gatggtgaca ggtcgcgccc ccaccacacg
      781 cgcggcgccc aactcgggca ggcgctgaag ccaggcatcg ctccgcgcca gggccgcggc
      841 ccagcgtgcc tgatcgaagc gctcttcctc ccacaccggc tccaccatcg cgaactcagg
      901 gagcagcacc agctcggacc gatgccgaga cgtgtgctga cggagaccgg cccacgcggt
      961 cgccagggca tcgggctcat ggggaagctc gcagacggtg acccgcacta ccagacccgc
     1021 acccgggcgg cgggctcgag gtacagccgc tgccccgg
//
LOCUS       DATIFF010000120         1128 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1864161, whole genome shotgun sequence.
ACCESSION   DATIFF010000120 DATIFF010000000
VERSION     DATIFF010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1864161"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            93..824
                     /locus_tag="VLD58_01845"
     CDS             93..824
                     /locus_tag="VLD58_01845"
                     /inference="COORDINATES: protein motif:HMM:NF014409.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HSB53061.1"
                     /translation="MKSVAIIQARLGSRRFPGKVLQDLGGRPVLAHVVERCQAIPGIS
                     QVALTIPPLPEDDPLADWADDHGIACHRGQFPLAGTEANDCLAAYQAAAYALNADVVV
                     RVTADCPLIDSALAGEILALVGVMDAGGPAVFASNCRPMRTFPDGLDVEAFTAALLED
                     AHYHEPASSPAREHVTGAIARLLGPHELARHNVRWSEDLSAVRWTVDTRADLERLRQI
                     VAHLPAGAFTLADTRKAAEAAGLWP"
     gene            821..>1128
                     /locus_tag="VLD58_01850"
     CDS             821..>1128
                     /locus_tag="VLD58_01850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSB53062.1"
                     /translation="MSRTANSLYERTLISVSDWRARAARVTPNGSQTRSKVGLFDAPV
                     AVVRAKGSQVWDLYGRQYTDWISALCAVTLGYGYPDVDEAVHRQIRDAGVSFPLSTVL
                     "
BASE COUNT          175 a          364 c          410 g          179 t
ORIGIN      
        1 gtgtttgatc tgcatcaggt agaggactgg agcggtgtgg cgctaaaaga atgccgggct
       61 tatgactggc gcgtgcgcct actggggcag cgatgaaaag cgtcgccatt attcaggcga
      121 gactcggcag tcgccgcttc ccaggaaagg tcttgcagga cctcggcggt cgcccggtcc
      181 tggcccacgt ggtggagcgc tgccaggcga tccctggcat ctcccaggtg gcgctgacga
      241 tcccgccact gccggaggac gacccgctgg cggactgggc cgacgaccat gggatcgcct
      301 gccaccgggg ccagttcccg ctcgcgggca cggaggcgaa cgactgtctg gcggcctatc
      361 aggcggcggc ctacgcgctg aacgcggatg tggtggtgcg ggtgacggcg gactgcccgc
      421 tcatcgacag cgcattagcc ggcgagatcc tcgccttggt cggggtgatg gatgcaggcg
      481 gccccgccgt cttcgcctcg aattgccgcc cgatgcggac cttcccggac gggctcgatg
      541 tggaggcctt cacggcggcg ctgcttgagg acgcccacta ccacgagccg gcgagcagcc
      601 cggcccgcga gcatgtcact ggggccattg cccggctcct gggcccgcac gagctcgccc
      661 ggcacaacgt ccggtggagc gaggatctga gcgcggtgcg gtggacggtc gacacgcgag
      721 cggatctcga gcgactccgg cagatcgtcg cccatctccc ggcgggggcg ttcacgctgg
      781 cggacacgcg gaaggcggcg gaagcggcgg gactgtggcc atgagccgaa cggccaactc
      841 tctctacgaa aggaccctga tctccgtgag cgactggcgc gcccgagcag cccgtgtgac
      901 gccgaatggc agccaaaccc gcagtaaagt cgggctcttt gatgccccgg tcgcggtggt
      961 gcgcgcgaag gggagccagg tctgggacct ctacggtcgg cagtacaccg actggatttc
     1021 ggccctgtgt gcggtgacgc tcggctatgg gtacccggac gtggacgagg ccgtgcaccg
     1081 ccagatccgc gatgcgggcg tgagtttccc gctctcgacc gtgctcga
//
LOCUS       DATIFF010000121         2030 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_18628, whole genome shotgun sequence.
ACCESSION   DATIFF010000121 DATIFF010000000
VERSION     DATIFF010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18628"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..416)
                     /locus_tag="VLD58_01855"
     CDS             complement(3..416)
                     /locus_tag="VLD58_01855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53063.1"
                     /translation="MSHPVPARHTASLAALWFGLFAAPAGWSVQLLVLYPLVAHGCFP
                     REHPLAMPVTPSLSTVTGLVTAVALAVALLAGLVALRSWRAAQPDRESPGLHLLETGE
                     GRSRFMAFGGVVLSGLFLFGILMNAVPLLLLGPCG"
     gene            complement(423..1019)
                     /locus_tag="VLD58_01860"
     CDS             complement(423..1019)
                     /locus_tag="VLD58_01860"
                     /inference="COORDINATES: protein motif:HMM:NF012720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HSB53064.1"
                     /translation="MSAIAVPRILPVDREDTRAPGSWGMVFLIATEAALFAYLLFSYF
                     YLGSLARGAWPPTGEPELRLALPNTLILLLSSGTIWWAEAGIRRGRQGRLRLGLLLTF
                     VLGAVFLSIQVAEYGHLDFSPRTDAYGSLFYTITGFHGAHVVVGLLMLLVVQLRAWLG
                     HFGPGHHLAVTNTAWYWHFVDVVWLAVFTSLYLSPRFG"
     gene            complement(1016..>2030)
                     /locus_tag="VLD58_01865"
     CDS             complement(1016..>2030)
                     /locus_tag="VLD58_01865"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HSB53065.1"
                     /translation="VLTGLVGFGVWMHHMFATGVAQMSMSFFSAASMVITVPSAVAVF
                     AWIATLWHGRPVVRTPFLFAAGFIVLFVIGGVSGVATAAVPFDWQLTDTYFVVAHLHY
                     VLIGINLFAVIGGFYFWLPKMTGRMLSERLGRWNFWVMFLGFNLGFLPMHVTGLLGMP
                     RRVYTYPAGLGWDTLNLVTTIGAFVFAAGLFLFLVNVVWSRLHGRLAGPNPWHAPTLE
                     WSVPSPPPPYNFEVIPTVESRHPLWEEELGEGARSVIGYGPALDQGRETLGTSTLDAE
                     PEQVLRMPEDSLWPLLLALALTVVAYGLLVGAWWVAGAGGAATLVTVAGWLWPQAPAE
                     AGR"
BASE COUNT          390 a          727 c          696 g          217 t
ORIGIN      
        1 cctcagccgc atggtcccag cagcagcagg ggaaccgcat tcatcaggat gccgaagagg
       61 aacagcccgc tgagcaccac cccgccgaac gccatgaacc gcgagcgccc ctccccggtc
      121 tccagcaggt gcagcccagg cgactcgcga tccggctggg cggcccgcca gctccggagc
      181 gcgacgaggc ccgcgagcag cgccacggcc agcgcaaccg ccgtgaccag gccggtcacg
      241 gtggacagcg acggggtgac gggcatcgcg agggggtgct cgcgggggaa gcagccgtgg
      301 gccacgagcg gatacagcac caggagctgc acgctccacc cggccggcgc ggcgaagagc
      361 ccgaaccaca gcgcagcgag gctcgcggtg tgccgggcgg gaacgggatg ggacatcgcg
      421 ggctacccga accggggtga gagatacagc gaggtgaata ccgccagcca gaccacgtcc
      481 acgaagtgcc agtaccaggc ggtgttggtg acggccaggt gatgtccggg gccgaagtga
      541 ccgagccagg ccctgagctg gaccaccagc agcatcagca gacccaccac aacgtgggcg
      601 ccgtggaagc cggtgatggt gtagaacagc gagccgtagg cgtcggttcg gggcgagaag
      661 tcgaggtggc cgtactccgc gacctggatc gagagaaaca ccgcgcccag cacgaaggtc
      721 aggagcaggc cgaggcggag acggccctgc cgtccgcgcc ggatgcccgc ctcggcccac
      781 cagatggtac cgctgctcag aaggaggatc agggtgttcg ggagcgcgag ccgcagctcc
      841 ggctcgccgg tcggcggcca ggcgccgcgg gccagggagc cgaggtagaa gtagctgaac
      901 agcaggtagg cgaagagcgc cgcctcggtg gcgatcagga acaccatccc ccaggacccc
      961 ggcgcccggg tgtcctcgcg gtccaccggc aggatacggg gcaccgcgat ggcgctcatc
     1021 ggcccgcctc cgccggcgcc tggggccaga gccaccccgc gacggtcacc agcgtagccg
     1081 cccctccggc cccggccacc caccatgcgc cgaccaggag gccgtacgcg accacggtca
     1141 gcgccagcgc caggagaagc ggccagagcg aatcctccgg catccggagc acctgctccg
     1201 gctcggcgtc gagcgtggac gtgcccagcg tctcccgccc ctggtccagc gccggcccgt
     1261 acccgatcac actccgcgct ccctcgccca gctcctcctc ccacagcggg tgccggcttt
     1321 ccaccgtggg aatcacctcg aagttgtacg gcgggggcgg cgacggcacc gaccactcca
     1381 gggtgggcgc gtgccacggg ttggggccgg cgagcctgcc gtggagccgg ctccagacga
     1441 cgttgaccag gaagaggaac agtcccgccg cgaacacgaa ggcgccgatc gtggtgacca
     1501 ggttcagggt gtcccacccc aaacccgccg gataggtgta gacccgcctc ggcatgccca
     1561 ggagcccggt gacgtgcatc ggcaggaagc cgagattgaa gccgaggaac atcacccaga
     1621 agttccatcg acccagccgc tcgctcagca tccgcccggt catcttgggc agccagaagt
     1681 agaacccccc gatcacggcg aacaggttga tcccgatcag cacgtagtgc aggtgcgcca
     1741 ccacgaagta ggtgtcggtg agctgccagt cgaacggcac cgcggccgtg gccacacccg
     1801 agacaccgcc gatcacgaac agcacgatga acccggccgc gaacaggaac ggcgtccgca
     1861 ccaccggccg gccgtgccag agggtggcga tccaggcgaa caccgcgacc gcgctcggca
     1921 ccgtgatcac catgctcgcc gcgctgaaga agctcatgga catctgcgcc acaccggtcg
     1981 cgaacatgtg gtgcatccat acgccgaagc cgaccagccc cgtgagcacc
//
LOCUS       DATIFF010000122         1102 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1249829, whole genome shotgun sequence.
ACCESSION   DATIFF010000122 DATIFF010000000
VERSION     DATIFF010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1249829"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(212..>1102)
                     /locus_tag="VLD58_01870"
     CDS             complement(212..>1102)
                     /locus_tag="VLD58_01870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53066.1"
                     /translation="RARGIASLPSVRTINRILRRRGALDGQRRVRRPPPPPGWYLPQV
                     AARCHELDSVDVVEGLVIKGGPQVEVLNAVSLHGGLVASWPGPASVTAKFVVECLVEH
                     WREFGLPGYAQFDNDTIFQGTHAHPDAVGRVSRLCLSLGVVPVFVPPREPGFQAAMER
                     YNGSWQAKVWSRFEHGDLSSLRDRSRRHVAALRRHRADRIESAPSRRAFPERWVLDLQ
                     ARLKGRIVYLRRTDATGAVEVLGRSFEVDRQWVHRLVRAEVDLDGGLIRFYRLRRREP
                     RDQPMMREVVYRIKHKRFCE"
BASE COUNT          189 a          406 c          351 g          156 t
ORIGIN      
        1 gtgaaggcga atggcgcttt cgcctcatac gagggcgaga cgggctcgcc gttgtctttc
       61 ccgatgtcca tacccgcgta agtggccagg tgccactaca tcccgaacaa tcgaaaggcg
      121 atgcgctggc aagtgccacc acatcccgaa cactcattgc agacatgtgc tccgctcagc
      181 atgaagccgg cggagcacca gcggtgtcct ctcactcgca gaatcgctta tgtttgatcc
      241 gatagaccac ctccctcatc atcggctgat cccgaggctc gcgccggcgg aggcgataga
      301 accggatcag gccaccgtcc aagtccacct ccgcccgaac cagcctgtgg acccactgcc
      361 gatccacctc aaagctccgg cccaacacct ccaccgcgcc ggtggcatcc gtccgcctca
      421 ggtagacgat ccggcccttc agccgggcct ggaggtccag gacccaccgc tccgggaacg
      481 cccgccgcga aggtgccgac tcgatccgat cggcacgatg acgccgcagg gcggccacgt
      541 ggcggcgcga ccggtcccgc aagctgctca ggtcgccgtg ctcgaaccgg gaccagacct
      601 tggcctgcca ggagccgttg tagcgctcca tggccgcctg gaagcctggc tcgcgcggcg
      661 ggacgaacac cgggaccacc cccaggctca ggcacagccg gctgacccgg cccactgcgt
      721 cgggatgggc gtgggtcccc tggaagatcg tgtcgttgtc gaactgggcg taacccggca
      781 gaccgaactc gcgccagtgc tcgaccaggc attcgaccac gaacttcgcc gtcacgctgg
      841 ccgggccggg ccacgaggcg accaacccgc cgtgcagcga gacggcgttg aggacttcga
      901 cctgggggcc gcccttgatg accagcccct cgacgacgtc gacgctgtcg agttcgtgac
      961 accgggccgc gacctgcggc agataccatc ccggcggcgg gggtggccgg cgcacccgcc
     1021 gctggccgtc gagggcgccc cgccgccgca ggatgcggtt gatggtccgc accgacggga
     1081 gcgacgcgat cccccgggct cg
//
LOCUS       DATIFF010000123         1594 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_787761, whole genome shotgun sequence.
ACCESSION   DATIFF010000123 DATIFF010000000
VERSION     DATIFF010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_787761"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..917
                     /locus_tag="VLD58_01875"
     CDS             30..917
                     /locus_tag="VLD58_01875"
                     /inference="COORDINATES: protein motif:HMM:NF005875.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HSB53067.1"
                     /translation="MSNIQTVGVLGCGLMGSGIAQVAAMAGCRVVVRDTAPEQLEKGR
                     LAIGKSLAKLVEKGKLAATAQEAALNRLRFVTDLGGLTESDLIIEAVTEDLALKNQLW
                     RELDASCPARTVFASNTSSLTIASMAAATTRPDRFAGLHFFNPVPLLPLVEVVRSVLT
                     SSDTVDLLLAFARKLGKEPVLARDSSGFIVNLLLVPYMLDAIRALERGVASISDIDSA
                     MRLGASHPMGPLTLADFVGLDTLARIGDIMFEEYRETRYAPPPLLRRMVLAGLFGRKN
                     GRGFYDYSQDPAVPSDLGL"
     gene            922..1413
                     /locus_tag="VLD58_01880"
     CDS             922..1413
                     /locus_tag="VLD58_01880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53068.1"
                     /translation="MPRSTLAGLAALVALVSACRPNTTRPYFPPVTGAPQIEIELGVR
                     EATQALADVLRSDTIPVARVEPRDGFLQSAWFRVQTRKATSARRLGPDVVQIRAWVDP
                     SRPGWSRMTVETVYRPLADPSLSPRDLDRQVPPDHPVGKRVEQIITELARLYEPDSTA
                     AGN"
BASE COUNT          257 a          566 c          518 g          253 t
ORIGIN      
        1 caccgctcac tgctcactgc tcactaccca tgtccaacat ccaaaccgtc ggcgtgctcg
       61 gctgcggact catgggcagc ggcatcgccc aggtcgcggc gatggccggc tgccgagtgg
      121 tggtgcggga caccgcgccg gagcagctgg agaagggccg actggcgatc gggaagtcgc
      181 tcgccaaact ggtggaaaag gggaagctcg cggccacggc ccaggaggcg gcgttgaacc
      241 ggctccgctt cgtcaccgac ctcggcgggc tgaccgaatc ggacctcatc atcgaggcgg
      301 tgaccgagga tctcgcgctc aagaaccagc tgtggcgcga gctggatgcc tcctgcccgg
      361 cgcggaccgt tttcgcctca aacacctcca gcctgaccat cgcctcgatg gccgcggcca
      421 ccacgcgccc cgaccggttc gccgggctcc acttcttcaa cccggtgccc ctcctcccgc
      481 tggtggaggt ggttcggagc gtcctgacca gctcggacac cgtggacctg ctgctcgcgt
      541 tcgcccggaa actcggcaag gaaccggtgc tggcgcggga cagctccggg ttcatcgtta
      601 acctgctcct ggtgccctac atgctggatg cgatccgggc cctcgagcgg ggcgtcgcct
      661 cgatcagcga catcgacagc gccatgcggc tcggcgcgag tcatcccatg ggcccgctca
      721 cgctggcgga cttcgtgggg ctcgataccc tcgccaggat cggcgatatc atgttcgagg
      781 aataccgcga gacccgctac gccccgccgc cgctgctcag acggatggtg ctcgcgggcc
      841 tcttcggccg gaagaacggc cgggggttct acgattattc acaggacccc gcggtccctt
      901 cggaccttgg cctctgacat catgccccgt tcgacactag cgggcctcgc cgccctcgtt
      961 gccctggtct cggcctgcag gccgaacacg acccgaccct acttcccgcc ggttaccggg
     1021 gcgccgcaga tcgagatcga gctcggcgta cgggaggcca ctcaggcgct ggcggacgtg
     1081 ctgcggtccg acaccatccc ggtggcccgg gtggagccgc gcgacggctt cctgcagagc
     1141 gcgtggttca gggtgcagac caggaaggcg acaagtgcgc ggcggctcgg acccgacgtg
     1201 gtgcagatcc gcgcctgggt ggatccctcc cgcccggggt ggagccggat gaccgtcgaa
     1261 acggtgtacc gcccgctcgc cgatcccagc ctctcccccc gcgatctcga ccgccaggtg
     1321 ccccccgacc atccagtcgg gaagcgggtc gagcagatca tcaccgagct ggcgcgactg
     1381 tacgagccgg actcgacggc ggcggggaat tgacgattgc tgattgacga ttgggcgccg
     1441 ggccagggcg cggcccattc agcaattgtc aatcgtcaat gagaaatcgt caatcagcaa
     1501 tcacataggc ccgcacccac tcctccagct tgccgagatc gagtcccgca tccttgcagg
     1561 gccccgccgg cagcgtcatg gtgaggccga acac
//
LOCUS       DATIFF010000124         1161 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1403597, whole genome shotgun sequence.
ACCESSION   DATIFF010000124 DATIFF010000000
VERSION     DATIFF010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1403597"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..388)
                     /locus_tag="VLD58_01885"
     CDS             complement(<1..388)
                     /locus_tag="VLD58_01885"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012616.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA adenine dimethyltransferase family protein"
                     /protein_id="HSB53069.1"
                     /translation="MARPRRRFGQHFLTNPVILERIVDALDPGPEDAVLEIGPGPGAL
                     TDALLRRGARVTGIEIDRDLVAQLRQRCAGARIVEGDALALDWHTIVAPGAPGAWLLA
                     GNIPYNITSPLLDKALTPPRPRRVGFL"
     gene            complement(388..>1161)
                     /locus_tag="VLD58_01890"
     CDS             complement(388..>1161)
                     /locus_tag="VLD58_01890"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HSB53070.1"
                     /translation="GAAIENARLAAREREQQRLQDELALAHDLQLKLMPDPAVLHGEA
                     QVAVRCLPVASVGGDFYTFLRLGEGRVGAMLGDVSSHGLSAALVMALVIAAAGIHIAS
                     ATGPAETLRLLRESLVAKLSETEMYASVFYGILDHKACTLKYANAGHPHAFRIGRDGV
                     PARLEATAPPLGLGVGGLIGQETVAWDAEGDLLCLWTDGLVDAEAPSGERFGESRLLE
                     RLTALRELAPEEIVARVMVEVDGYSTAPSDDRTLLVLRC"
BASE COUNT          178 a          403 c          422 g          158 t
ORIGIN      
        1 ccaggaaccc gacccggcgc gggcgaggcg gggtgagggc cttgtcgagc aggggcgagg
       61 tgatgttgta ggggatgttg cccgccagga gccaggcccc cggtgcaccg ggagcgacga
      121 tggtatgcca gtcgagtgcg agggcgtccc cttcgacgat gcgggccccg gcgcagcgct
      181 gccggagctg ggcgaccagg tcccggtcga tctcgatgcc ggtgacccgt gccccgcgac
      241 ggagcagcgc atcggtgagc gcacccggac ccggtccgat ctcgagcacc gcgtcttccg
      301 gtccgggatc gagtgcgtcc acgatccgct cgaggatcac cgggttggtg aggaagtgct
      361 gtccgaaccg gcgcctgggc cgggccatca gcagcgcagc accagcagcg tgcggtcgtc
      421 cgacggcgcc gtggaataac cgtccacctc gaccatgacc cgggccacga tttcctccgg
      481 ggccagttca cgaagggcgg tgagacgctc cagcaggcgc gattcgccga accgttcgcc
      541 cgagggggcc tccgcgtcga ccagcccatc ggtccagagg cagagcaggt ccccttcggc
      601 gtcccaggcc accgtttcct ggccgatcag cccgcccacg cccaggccga gcggcggtgc
      661 tgtagcctcg agccgtgccg ggacgccgtc acgaccgatg cggaaggcgt gcggatggcc
      721 ggcgttggcg tacttcagcg tgcaggcctt gtggtcgagt atcccgtaga agaccgaggc
      781 gtacatctcg gtttcggaaa gcttggccac caggctctcg cgcagcagcc ggagcgtctc
      841 cgccgggccg gtcgcggagg cgatatggat gcccgccgcc gcgatcacca gggccattac
      901 cagcgccgcg gagaggccgt gcgaggagac gtcacccagc atggcgccga cccggccctc
      961 acccagccgc aggaaggtgt agaaatcacc accgacggac gccaccggca ggcagcgcac
     1021 cgccacctgg gcctcaccgt gcagcacggc cgggtcgggc atcagcttga gctggaggtc
     1081 gtgggcgagg gcgagttcgt cctgaaggcg ctgctgctcg cgttcgcggg ccgcgagccg
     1141 cgcgttctcg atcgccgcgc c
//
LOCUS       DATIFF010000125         2265 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_941941, whole genome shotgun sequence.
ACCESSION   DATIFF010000125 DATIFF010000000
VERSION     DATIFF010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2265
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_941941"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..203)
                     /locus_tag="VLD58_01895"
     CDS             complement(<1..203)
                     /locus_tag="VLD58_01895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53071.1"
                     /translation="MRARGLAAAALLFPVLAGSLSGQWPNGVHVTDTPHNLTVPASSQ
                     ASDMQGRIRNYGEICVYCHSPHEG"
     gene            complement(200..1354)
                     /locus_tag="VLD58_01900"
     CDS             complement(200..1354)
                     /locus_tag="VLD58_01900"
                     /inference="COORDINATES: protein motif:HMM:NF028479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-bladed beta-propeller"
                     /protein_id="HSB53072.1"
                     /translation="MRRHLLRPALRRGLAPLLLGTALQPLAAQQIRPAALVWPAPPEQ
                     ARIRYVGAISSETDVGKKESFLSRLGRSLVGGKRSGVVRVARPFDVAAVAPDRIFVSD
                     GLTRGLLLFDPHRKEARLVGIDVPGGLSKPMGVGAGGHGSVLLADQLARRVVVLDSLG
                     RYQRAFGDTLSLLNPVDVAVDTTAGRYYVVDSYQHQVVVFDGKGALIQRLGRTAGGVR
                     QGASPSVGPDPSVPVHLGENGDERPRTHDVVENRGEAPGEFKYPWAVTVGADGSVYVS
                     DQMNFRVQMFDRRGKLVRVIGGIGTGPGHFARPKGVAVDSEGHLYVVDAAFGNVQVFD
                     PEGALLLPFGTGGVAAGGQILPLGLATDGNDRIYVVDRFNNRIQIYEYLK"
     gene            complement(1360..1746)
                     /locus_tag="VLD58_01905"
     CDS             complement(1360..1746)
                     /locus_tag="VLD58_01905"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HSB53073.1"
                     /translation="MRSTYLFSLAVVALIPVATPRPRPAAKVVAVKMVDVSATAFKFD
                     PAAITAAPGDTVRFTQTSKTPHNVELKAVPAGVDAGASKMGPFLATEGATYDLVLDAK
                     FAPGTYQFACTPHEMLGMRGTLTVAK"
BASE COUNT          379 a          733 c          805 g          348 t
ORIGIN      
        1 ccctcgtggg gcgagtgaca gtagacgcag atttcgccgt agttgcggat ccggccctgc
       61 atgtcgctgg cctggctcga cgcgggaacg gtgaggttgt gcggggtgtc ggtgacgtgc
      121 actccgttgg gccactgccc gctcagggag ccggccagca ccgggaagag cagggccgcc
      181 gccgccagcc cgcgggccct catttcaggt actcgtagat ctggatccgg ttgttgaacc
      241 ggtccacgac gtagatccgg tcgttaccgt cggtcgccag gccgaggggg aggatctgcc
      301 ctcccgccgc aactccaccg gtgccgaacg gcaggagcag cgccccttcc ggatcgaaca
      361 cctgcacatt gccgaaggcc gcatccacca cgtacaagtg gccttcgctg tcgaccgcga
      421 cacccttggg cctcgcaaag tggcctggcc cggtgccgat cccgccgatc acccgcacca
      481 gtttgccgcg ccggtcgaac atctgcaccc ggaaattcat ctgatccgag acgtacacgc
      541 tgccgtcggc gccgacggtc acggcccagg gatacttgaa ctcgcccggc gcttcgccgc
      601 gattctccac cacgtcgtgc gtgcggggcc gttcgtcgcc attttcgcct agatgcaccg
      661 ggacgctggg atccgggccg accgagggcg aggcgccctg gcgcacgcca ccggcagtcc
      721 ggcccaggcg ctggatcagc gcacccttcc cgtcgaacac gaccacctgg tgctgatagc
      781 tgtcgaccac gtagtagcgg ccggcggtgg tatcgacggc gacatcgacc ggattgagga
      841 gcgagagagt gtcgccgaag gcgcgctgat agcggcccag cgagtcgagg accaccaccc
      901 gccgcgccag ctgatcggcg aggaggacac tgccatggcc tccggctccg acgcccatcg
      961 gcttcgagag tccgcccggg acatcgatcc cgacgagacg ggcctccttg cggtgcggat
     1021 cgaagagcag gagtcctcgg gtgagcccat cactcacgaa gatccggtcg ggtgcgaccg
     1081 cggcgacatc gaaggggcgg gccaccctga ccaccccgct tcgcttcccg cccacgagcg
     1141 agcgcccaag ccggctcagg aacgactcct tcttgccgac gtcggtctcg gaactgatgg
     1201 cgccgacata gcggatccgg gcctgctccg gcggcgccgg ccacaccagc gcggccggcc
     1261 tgatctgctg ggccgccagc ggctgcagcg ccgtgcccag gaggagagga gcgagcccgc
     1321 gccggagcgc gggccggaga aggtggcggc gcatggggct tacttcgcga cggtgagggt
     1381 gcccctcatg cccagcatct cgtgcggcgt gcaggcgaac tgataggtgc ccggagcgaa
     1441 cttggcgtcg agcaccaggt cgtaggtggc accctcggtg gcgaggaagg ggcccatctt
     1501 cgaggcgccg gcatcgacac cggccgggac ggccttgagc tcgacgttat gaggggtctt
     1561 cgaggtctgt gtgaagcgca cggtgtcgcc cggcgccgca gtgatggccg ccgggtcgaa
     1621 cttgaatgcg gtggcggaga cgtcgaccat cttcaccgcg acgactttcg cggccggccg
     1681 gggccgcggc gtggcgacgg ggatcagggc aactacggcc agggagaaga gataggtcga
     1741 ccgcatgggg ctggctcctg tgacggttcg gggatgcagg cgcgcattgt gagctgggtg
     1801 atttccttca cggcgaatgc aaaccaaccg cctcggtcat gaactcgtca tgaaagcttg
     1861 gcgaaaggaa ttctgccgaa cgtctcaatg cagcgggtga agctgacggg gtaggcgatc
     1921 tgtagcgggg cgctacgaat cggaacaatg tgttacggga tttgttgaag gggcgccagg
     1981 ggaagcgggg gtgcagaaac gccgatgggc cgaccgacgt gatcactgcc tgacagaagg
     2041 gtgagcaccc gtgcgggtgt gcctcgacca tttcagtgct cttcgtaggt cgagatgcgg
     2101 gccttggtga tcgtctcgcc gagcccgggc agccgaccgg ccggaaggcc agcgaaggct
     2161 accgcttggg ataccgggga cgggcccgga ggcaccccgg gcggtgcatg agcgaaggga
     2221 tgccgctaga ttggcgccgt cccgcgctgg cccggaacct gccct
//
LOCUS       DATIFF010000126         1479 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_19364, whole genome shotgun sequence.
ACCESSION   DATIFF010000126 DATIFF010000000
VERSION     DATIFF010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1479
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19364"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..198
                     /locus_tag="VLD58_01910"
     CDS             <1..198
                     /locus_tag="VLD58_01910"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HSB53074.1"
                     /translation="NNLVSPLVYGQRLRLNPVAVFVGVLFWWSLWGVPGAFLAVPIIA
                     TAKVLGDHLPKLRPLGEFLGG"
     gene            280..1260
                     /locus_tag="VLD58_01915"
     CDS             280..1260
                     /locus_tag="VLD58_01915"
                     /inference="COORDINATES: protein motif:HMM:NF019292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside recognition domain-containing
                     protein"
                     /protein_id="HSB53075.1"
                     /translation="MLNYIWAGLIISSFVFALGSDAGDIASDRYRNGRPLPVALMFPT
                     GYDPAGRQIAVEIRVDSAAYAGFYGAGATLPRSYAGTLRQTREGAQLRFAAGAALPEP
                     LATIATVSKSRDDELQGRLVDFTPPAASDTPPVPAGVVFAPVRFVKLNAIAAAALDFA
                     KTAAGIALGLVGVLALFLGLLKIAEHAGIIYGLVKLVRPVLRPLFPEVPADHPALGMI
                     ALNLTANVFGLGNASTPFGIKAMEELKTLNPSEDTASNSMVMLLAINTASVQLVPPVL
                     LLALLGLQINQLIFPIILAGLCSVIIAIASVKLYGRLPSIRASDPNRQPS"
     gene            1269..>1479
                     /locus_tag="VLD58_01920"
     CDS             1269..>1479
                     /locus_tag="VLD58_01920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="spore maturation protein"
                     /protein_id="HSB53076.1"
                     /translation="MESVRNAIGLVSVFVIPLMLVGFPLYGLYKRVPVYESFVEGAKE
                     GFQVAVRIIPYLVAILFAIAMFRASG"
BASE COUNT          194 a          524 c          504 g          257 t
ORIGIN      
        1 aacaacctgg tgagcccgct ggtgtacggg cagcggctcc ggctcaatcc ggtggcggtg
       61 ttcgtggggg tgctgttctg gtggtcgctc tggggcgtgc ccggggcgtt cctcgccgtg
      121 ccgatcatcg ccaccgccaa ggtgctcgga gaccacctgc cgaagctgcg cccgctgggg
      181 gagttcctcg gcggctgacc cgcgcttgcc accgcccgcc tccccgtcgt atttgttccc
      241 ctgcctccac attcctccac accacaaccc ggccgagcca tgctgaacta catctgggcg
      301 ggcctgatca tctccagctt cgtcttcgcc ctcgggtccg acgccgggga catcgcgagc
      361 gaccggtatc ggaacgggcg gccgctgccg gtcgcgctga tgtttcccac cgggtacgac
      421 ccggcggggc ggcagatcgc ggtggagatc cgggtcgatt cggcggcgta cgccgggttc
      481 tacggcgccg gcgcgaccct cccccgcagc tatgccggga ccctgcggca gacccgggaa
      541 ggggcccagc tccgcttcgc cgcgggggcg gcgctgcccg agccgctggc caccatcgcc
      601 acggtgtcga agtcgcgcga cgacgagctc cagggacggc tggtggactt caccccgccc
      661 gcggcgtccg acaccccgcc ggtgccggcg ggggtcgtct tcgccccggt gcgtttcgtc
      721 aagctgaacg ccatcgctgc cgcggcgctg gacttcgcca agacggcggc ggggatcgcg
      781 ctggggctgg tgggggtgct ggcgctgttc ctggggctgc tcaagatcgc cgagcacgcg
      841 gggatcatct acggcctggt gaagctggtc cggccggttc tgcgcccgct ctttcccgag
      901 gtgccggccg accacccggc cctggggatg atcgcgctca acctgacggc caacgtgttc
      961 gggctgggca acgcctcgac ccccttcggg atcaaggcga tggaggagct caagacgctg
     1021 aacccgagcg aggacaccgc cagcaactcg atggtgatgc tgctggcgat caacaccgcg
     1081 agcgtgcagc tggtgccgcc ggtgctgttg ctggcgctgc tcggcctgca gatcaaccag
     1141 ctcatcttcc cgatcatcct cgcggggctc tgctcggtga tcatcgcgat cgcctcggtc
     1201 aagctctacg gccggctccc gagtatccgc gcgtccgacc ccaaccgcca accgagctga
     1261 ggccgaccat ggagagcgtg cgcaacgcca tcggcctcgt gtcggtcttc gtcatcccgc
     1321 tcatgctggt gggattcccg ctctacggcc tgtacaagcg ggtgccggtc tacgagagct
     1381 tcgtcgaggg agcgaaggag gggttccagg tcgcggtccg catcatcccg tatctggtcg
     1441 cgatcctctt cgccatcgcc atgtttcgcg ccagcgggg
//
LOCUS       DATIFF010000127         4996 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1096643, whole genome shotgun sequence.
ACCESSION   DATIFF010000127 DATIFF010000000
VERSION     DATIFF010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4996
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1096643"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1760
                     /locus_tag="VLD58_01925"
     CDS             <1..1760
                     /locus_tag="VLD58_01925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53077.1"
                     /translation="LSGAPAGVRTDLTRATTQSLEAYRAYLQGLEDLNGWNLGSAEEH
                     FRRAVELDSSFGLAYYKLSLTRGWLAGQGDSLGMDAIRRATLLSDRLPEHDRQMVTAY
                     RYFLEGNYDRGEAAYRALLAHDSTDADAWYGLGDVTFHASDQTRVAERFTKSIRAFRR
                     AIALDANYYLAYEHLTAIYRTTGQEKPYLALLAGDSIIVADAASKAPKLDSLRLAQAI
                     QRARSDGIAAAREWLTHQPENAHAQNALIYGYAVARQFDAALAEVDRLGRSPEGAGRV
                     DLDFIRTQLVAQQGDLKEATRLAAKALDSAKAERFDAGRLPAFETLGEVSNGANLLAY
                     SGKVALASRTLDLAAQIHDRWYPDMAGSEQVGDRSLYGHMLQSHLYTALGAPAAKLRP
                     IWNQISDSARRAPKAARKSIAEFGWAAAVGLYLQDTTDPTPINELSALGGGAPPPELK
                     ALVALERGDSAEARRLLQQPDSAVGKEFMARVQWFGYRQMIAAQAWAELGDDQRALKA
                     LDIFEPSKLSTSGLDIRWLLLGQARVLRGEIFERLGKPAEARDQYKLALAQWADADPA
                     LEALVSRVRARLDRLTGQG"
     gene            1894..2286
                     /gene="rnpB"
                     /locus_tag="VLD58_01930"
     ncRNA           1894..2286
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="VLD58_01930"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            2405..2635
                     /locus_tag="VLD58_01935"
     CDS             2405..2635
                     /locus_tag="VLD58_01935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53078.1"
                     /translation="MSRPSTPNDRKPYPDAWEQVADLRVFRTTASDWDRLISWRADMR
                     KRGWKLLRVTSDESELVAVFGKTKPDLRQAGS"
     gene            2674..3444
                     /locus_tag="VLD58_01940"
     CDS             2674..3444
                     /locus_tag="VLD58_01940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53079.1"
                     /translation="MTFRPWVIAALSVGVLAAWTPRPPAPLRYKLNMKTVQVVNLAAL
                     GQGEQRVEISGTGFVSVTSADSAGGQAVKVVLDSLTLSEGAPIPPDQVKAAAGTVWHA
                     FRAANGRIDDFASETENPVASTMEGALPQIFPPLKKGTPAGQAWTDTTETHRSNGIAI
                     RTVTNFQTSADNAGGQKVTRLAGASASSISGSQEGPQGTVQIEGTGTGTSSWVVGADG
                     TCLSSTYNGTQSLQISIAAAPEPLPVTVTIEGSASLLK"
     gene            3446..4327
                     /locus_tag="VLD58_01945"
     CDS             3446..4327
                     /locus_tag="VLD58_01945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53080.1"
                     /translation="MRRLWGALGAALVIGCGSGGAGTRTGQPAPSPAPAPSKPGAETP
                     RPEPGRDITVRYPLSGAGMVRYAFARRDSVAATMPSGESQVQTLASTAYLTIAWIAAD
                     SGTRITGTVDSVVADSGQMLPLAVLDSARGSRWTALRPAGGGLTGLSATKTSLLGDQI
                     RDQLMLLYPHLPLDGAHPGNRWEDSTQAPARVSAFEANVTFRLSHEAGQLDGAGALPI
                     QALISRAATGEATQFGQPITLKATGTDTLNYRLAGDGRVLEVTGARWTSLVVELASIG
                     QTVPVTEVSSLRMTLLR"
     gene            4455..>4996
                     /locus_tag="VLD58_01950"
     CDS             4455..>4996
                     /locus_tag="VLD58_01950"
                     /inference="COORDINATES: protein motif:HMM:NF013106.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008955 - peptidoglycan
                     glycosyltransferase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic peptidoglycan transglycosylase"
                     /protein_id="HSB53081.1"
                     /translation="MARPIARVSPGKKGGHPPPAPPRLYRPVPLDSIAPALQDAVIIG
                     EDNNFRSHHGIDYLALAHAIGYRRQTFDWGNPRDRKELEAVLPQVWARRDRLRGASTI
                     SQQLAKNLYLSPSRNPLRKVKEAVITWRLEAALGKERIMELYLNVVELGDGVFGAEAA
                     SQLYFKHSARQLTREQAAALA"
BASE COUNT          813 a         1765 c         1714 g          704 t
ORIGIN      
        1 atctctccgg cgcgccggcc ggcgtccgca ccgacctgac ccgcgccacg acccagtcgc
       61 tcgaggccta ccgcgcctat ctccagggac tggaagatct caacggctgg aacctcggct
      121 cggccgaaga gcatttccgc cgggcggtcg agctcgattc atccttcggc ctcgcgtact
      181 acaagctctc gctgacccgc ggctggctcg cgggccaggg cgactcgctg ggcatggacg
      241 ccatccggcg cgccacgctc ctgtccgacc gtctgccgga gcacgaccgg cagatggtga
      301 cggcctaccg ctacttcctc gaggggaatt acgaccgggg cgaggcggca taccgtgcgc
      361 tgctggcgca cgattccacc gatgccgacg catggtacgg tctgggcgac gtgaccttcc
      421 atgcctcgga ccagacccgg gtggccgaac ggttcaccaa gtcgatccgc gccttccggc
      481 gggccatcgc cctcgacgcc aattactacc tcgcctacga acacctcacg gcgatctacc
      541 gcaccaccgg ccaggagaag ccgtacctcg cgctcctggc gggtgattcg atcatcgtgg
      601 ccgatgccgc aagcaaggcg cccaagctcg attcgctccg cctggcgcag gcgattcagc
      661 gggcccgcag cgacggcatc gccgccgcgc gcgagtggct cacccatcag ccggagaacg
      721 cccacgccca gaacgcattg atctacggct acgcggtggc ccggcagttc gacgccgcgc
      781 tggcggaggt cgaccggctg gggcggtccc ccgagggagc gggccgggtc gatctcgact
      841 tcatccgcac ccagctggtg gcgcagcagg gcgacctcaa ggaagccacc cggctggcag
      901 cgaaggcgct cgacagcgcc aaggcggagc gattcgacgc cggccgtctc cccgcgttcg
      961 agaccctggg tgaggtgagc aacggcgcca acctgctggc gtactcgggg aaggtggcgc
     1021 tcgcgagccg gacgctcgac ctcgcggccc agatccacga ccgctggtac cccgacatgg
     1081 ccgggtccga gcaggtgggc gaccgttcgc tctatggcca catgctccag agtcatctct
     1141 acaccgcgct gggcgcgccg gccgcgaagc tccgccccat ctggaaccag atctccgaca
     1201 gcgcccgccg ggcgcccaag gccgcgcgca agagcatcgc cgagttcggc tgggccgcgg
     1261 cggtgggact gtatctccag gacaccaccg atcccacacc catcaacgag ctgtcagcgc
     1321 tgggcggcgg ggcgccgccg ccggagctca aggcgctggt ggcgctcgag cggggcgatt
     1381 ccgccgaggc gcgccggctg ctgcagcagc cggacagcgc ggtcgggaag gagttcatgg
     1441 cgcgggtgca gtggttcggc tatcgccaga tgatcgcggc gcaagcgtgg gccgaactgg
     1501 gggatgacca gcgggcactc aaggcgctcg acatcttcga gccctccaag ctcagtacca
     1561 gcgggctcga catccgctgg ctgctgctgg ggcaggcccg ggtgctccgg ggcgagattt
     1621 tcgagcggct cgggaaaccg gccgaggcgc gggaccagta caagctggcg ctggcgcagt
     1681 gggccgacgc cgatccggca ctggaagcgc tggtgagccg ggtgcgggcg cggctcgacc
     1741 ggctgacggg gcaggggtag gaggcggcaa agcggcaagg cggcaaagcg gtcagaaggc
     1801 agcgctcggg atgacagcga tcccacgctc cccccctctc cggccgcctt gccgctttgc
     1861 cgccctgccg cctccccggc taagtttagt ctgcaggctg gatgcgatgg tcgcgggccg
     1921 ggtcacaccg gttcgaggaa agtccgagct ccaacgggta gactgccagg taacgcctgg
     1981 gcgccggaag gcgacggaaa gggccacaga aaacaaaccg cctcgccggg aaaccggccg
     2041 aggtaagggt gaaacggtgg ggtaagagcc caccgcgccg ctggcaacag cgacggcacg
     2101 gtaaccccca gtcggtgcaa ggccaaatat gcggtgaggc gtgacccacg ccgcggggct
     2161 gaaaggcctc acagccgcgg gtaggctgct cgaggcggct ggtgacagcc gtcccagaca
     2221 gatgaccatc tcttcagggt ttcggcccgg gagaaacaga actcggctta cggtccggcc
     2281 tggccggggc ggggtggcgg aagggtcgcc gccccgcccc ttcccccttt gtgacccccg
     2341 ccctcccgcc agcggcgctt ggacggtagc ttttcgaccc cggtttcctc cgcaggtgag
     2401 gtgcatgtcc cgtccaagta cgccgaacga ccggaagccc tatcccgacg cctgggaaca
     2461 ggtggcggat ctgcgcgtct tccggaccac ggcctcggat tgggaccgcc tgatcagctg
     2521 gcgcgccgac atgcgcaaac gcggctggaa gctcctccgg gtcaccagcg acgagagtga
     2581 gctggtggcc gtcttcggca agaccaaacc cgacctgcgt caggcgggtt cctaggcatt
     2641 gctcgccggt ccccttcttc cccagaggca gtcatgacgt tccgtccgtg ggtgatcgcg
     2701 gcgttgagtg ttggtgtgct ggccgcgtgg acgccgcgcc cgcccgcccc gctccgctac
     2761 aagctcaaca tgaaaacggt gcaggtggtg aacctggccg cgctggggca gggagagcag
     2821 cgggtggaga tcagtgggac gggcttcgtc agcgtcacgt cggcggacag cgccggcgga
     2881 caggcggtca aggtggtgct cgactcgctc accctgagtg aaggcgcccc gattcctccg
     2941 gaccaggtga aggccgcggc cggcactgtg tggcacgcct tcagagcggc gaacggccgg
     3001 atcgacgact tcgccagcga gaccgagaac ccggtcgcaa gcaccatgga aggggcgctg
     3061 ccccagatct ttcccccgct gaagaagggc actccggcgg gtcaggcctg gaccgacacc
     3121 accgagaccc atcgcagcaa cggtatcgcc atccgcacgg tcaccaattt ccagacctcg
     3181 gccgacaacg ccggtggcca gaaggtgacc aggctcgcgg gcgcatcggc cagctcgatc
     3241 tcgggaagtc aggagggtcc gcagggcacg gtgcagatcg agggcaccgg caccggcacc
     3301 agctcctggg tggtcggtgc ggacggcacc tgcctgagca gcacctacaa cggcacccag
     3361 tcgctccaga tctcgatcgc agcggctccg gagccgctgc ccgtcaccgt gacgatcgag
     3421 ggtagcgcct cgctgctcaa gtaaggtgcg tcgcctctgg ggagcactcg gcgccgcgct
     3481 ggtgatcggc tgcgggtcag gcggggccgg cacccgaacg ggccagcccg cgccctcgcc
     3541 tgctccggcg ccttccaagc ccggcgccga aacgccccgc cccgagccgg ggcgggacat
     3601 cacggtgcgc tatcccctga gcggcgcggg gatggtccgg tacgcctttg cccggcggga
     3661 ctccgtcgct gcgacgatgc cgagtgggga atcccaggtg caaacgctgg cgtcgaccgc
     3721 gtatctcacg atcgcctgga ttgcggccga tagcggcacc cgcatcaccg gcacggtgga
     3781 ctcggtggtt gcggacagcg ggcagatgct gccgctcgcg gtgctggaca gcgcccgcgg
     3841 ctcccggtgg accgcgctgc gcccggcggg cggcgggctg actggcctca gcgccaccaa
     3901 gacctcgctc ctgggcgacc agatccgcga ccagctgatg ctgctctacc cccatctccc
     3961 gctcgacgga gcccatcccg gcaaccggtg ggaagacagc acccaggcgc ccgcccgggt
     4021 aagcgcgttc gaagcgaatg tgaccttccg cctgagccat gaggcgggac agctcgatgg
     4081 cgcgggagcg ctcccgatcc aggcgctgat cagccgggcc gcgaccgggg aggcgaccca
     4141 gttcggccag ccgatcaccc tcaaggccac gggcaccgat accctgaact atcgcctcgc
     4201 cggtgacggc cgagtgctcg aggtaacggg tgcgcgctgg acgtcgctgg tggtggagct
     4261 cgcttccatc ggccagacgg tgccggtgac cgaggtctcc agcctcagga tgacactgct
     4321 ccgttaggcg ccctctgctc cgccgcatac tcgcaggctt cgcattcctt gccggagggt
     4381 tcgtcctctg gctcctcgcg gtgtggccgc cgccgctctg gtaccgcact cactggcccc
     4441 gggaaaccgc cttcatggcg cgccccatcg cccgggtttc ccctggcaag aagggtggcc
     4501 acccaccgcc cgccccaccc cgcctgtacc ggccggttcc actcgactcc atcgccccgg
     4561 cgctgcagga cgcggtgatt atcggggagg acaacaactt tcgctcccat cacgggatcg
     4621 actacctcgc gctggcccac gccatcggct accggcgcca gaccttcgac tgggggaacc
     4681 ccagggaccg gaaggagctc gaggcggtcc tgccgcaggt ctgggccagg cgcgaccgcc
     4741 tgcgcggcgc cagcaccatc tcccagcaac tggcgaagaa cttatatctc tcgcccagcc
     4801 ggaatccgct ccggaaggtc aaggaagcgg tgatcacctg gcggctcgag gcagcgctcg
     4861 gcaaggagcg catcatggag ctgtatctca acgtggtgga gctgggcgac ggcgtgttcg
     4921 gcgcggaagc cgccagccag ctctacttca agcacagcgc ccggcagctc acccgggagc
     4981 aggccgcggc gctggc
//
LOCUS       DATIFF010000128         2089 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1865705, whole genome shotgun sequence.
ACCESSION   DATIFF010000128 DATIFF010000000
VERSION     DATIFF010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2089
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1865705"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            112..1683
                     /locus_tag="VLD58_01955"
     CDS             112..1683
                     /locus_tag="VLD58_01955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53082.1"
                     /translation="MRRLRIGVLDLVTKSQKPSLYGRLMHANLASIMPQAISVWCEQA
                     GHRVTLCCYTGVEDLLAELADDLDVVFVGAFTQSAQVAYALSQVYRRRDAVTVLGGPH
                     ARCYPEDSVKYFDYVLGFTDQALVTELLQDPTPQRPIGVTLGAARQPAELPTLAERWK
                     FVAPTLAKAPTIKIVPMLGSLGCPYTCSFCIDSTVEYQPLSFPQLRDDLAFLLTKMKN
                     PIVGWHDPNFGVRFDEYMEAVESAVPRGAMRHIAESSLSLLGEPHLKRLQQNGFRAIL
                     PGIESWYDLGNKSKTRRTGLDKVKQVAEHVNLILRYIPYIQTNFVLGLDGDQGPEPFE
                     LTKKFIDLAPGAFPAYSLLSAFGRAAPMNLDYQRDGRVLPFPFHFLNNNHAMNVRPKH
                     YDWPSFYDGLIDVSRYSFSWRAIARRIPATATMIPKWMNVVRAVSSEGFGRIRYHTMI
                     RGLLDTDRELRAFFEGETTVLPSFYRDRIRQDLGPLWEFLPEEAIMHDANAYLNSSEA
                     PVRLAVAGVGAKRAG"
     gene            complement(1680..1937)
                     /locus_tag="VLD58_01960"
     CDS             complement(1680..1937)
                     /locus_tag="VLD58_01960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53083.1"
                     /translation="MINGSIREARLRPEYAALYPAIEPGVWMPASDVGRQLLLWHLTA
                     PTVPDGDRVMSAEHFEFRGGTRRSGTPDDERTRAADTRWRA"
BASE COUNT          324 a          732 c          697 g          336 t
ORIGIN      
        1 ctcgcagttc gagagccccg cccagccgac agctccgtcc tcacgtccca ccgtgcgacg
       61 gtccggtctt cctccaaccg cgtgcccgac ttccctgcgc gaaggacgta tatgcgccga
      121 ctgcgcattg gtgtgctgga cctcgtcacg aagagccaga agccctccct ctacggccgc
      181 ctgatgcacg ccaacctggc cagcatcatg ccgcaagcga tctcggtctg gtgcgagcag
      241 gccggtcacc gggtcacctt gtgctgctat accggggtgg aggacctgct ggccgagctg
      301 gcggacgatc tcgacgtcgt cttcgtcggc gccttcaccc agtcggccca ggtggcgtat
      361 gcgctgagcc aggtctatcg ccggcgcgac gcggtcacgg tgctgggggg gccgcacgcg
      421 cgctgctacc ccgaggactc ggtcaagtac ttcgactacg tgctcggctt caccgaccag
      481 gcgctggtga cggaactgct gcaggacccc acgccccagc gcccgatcgg cgtgacgctg
      541 ggcgcggcgc gccagccggc ggagctgccc accttggcgg agcgctggaa gttcgtggcg
      601 cccaccctgg ccaaggcgcc caccatcaag atcgtgccga tgctgggcag cctcggctgt
      661 ccctacacct gcagcttctg catcgactcg acggtggagt atcagccgct cagctttccc
      721 cagctgcgcg acgatctcgc cttcctgctg accaagatga agaacccgat cgtcggctgg
      781 cacgacccga acttcggggt ccgcttcgac gagtacatgg aggcggtgga atcggcggtg
      841 ccgcgggggg cgatgcggca catcgcggag agcagcctgt cgctgctcgg cgagccgcac
      901 ctcaagcgtc tccagcagaa cggcttccgg gccatcctgc cgggcatcga gtcgtggtac
      961 gacctgggca acaagtcgaa gacccggcgc accgggctgg acaaggtcaa gcaggtcgcg
     1021 gaacacgtca acctgatcct ccgctacatc ccctacatcc agaccaactt cgtgctcggt
     1081 ctcgacggcg accaggggcc ggagccgttc gagctcacca agaagttcat cgacctcgcg
     1141 cccggcgcct tcccggccta ctcgctgctg tcggcgttcg gccgcgccgc gccgatgaac
     1201 ttggactacc agcgcgacgg ccgggtgctg ccgttcccgt tccacttcct gaacaacaac
     1261 cacgcgatga atgtccggcc caagcactac gactggccct cgttctacga cgggctgatc
     1321 gacgtgagcc ggtactcctt ctcctggcgg gccatcgccc ggcggattcc cgccaccgcg
     1381 acgatgattc cgaagtggat gaacgtggtg cgcgcggtgt cgtcggaggg attcggccgg
     1441 atccggtatc acaccatgat ccgggggctg ctcgacaccg accgggagct ccgggcgttc
     1501 ttcgaggggg agacgacggt gctgccgagc ttctaccgcg accggatccg gcaggatctc
     1561 ggaccgctgt gggagttcct gcccgaggag gcgatcatgc acgacgccaa cgcctacctc
     1621 aacagctcgg aagcgccggt gcggctggcg gtggcggggg tgggggcgaa gcgggccggc
     1681 taggcccgcc agcgggtgtc ggcggcgcgg gtccgctcgt cgtccggggt accggagcgg
     1741 cgggtgccgc cgcggaactc gaagtgctcc gcactcatca cccgatcgcc gtcgggcacg
     1801 gtgggcgccg tcagatgcca gagcaggagc tggcgcccca cgtccgacgc gggcatccag
     1861 acgccgggct cgatcgcggg atacagggcg gcgtactccg gtcggagcct ggcctcccgg
     1921 atgctgccgt tgatcatggg tccctcctca tgcgcacgcc cgacgggttg acgccgagcc
     1981 cgccgggcgc tcttttgctg accggccatc cgcccacacg aggagcccgc atggacgacg
     2041 cggccgcgga tacgatctgc aagcgagcca tggtcgagct ggtgtttct
//
LOCUS       DATIFF010000129         1713 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_480926, whole genome shotgun sequence.
ACCESSION   DATIFF010000129 DATIFF010000000
VERSION     DATIFF010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_480926"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="VLD58_01965"
     CDS             <1..276
                     /locus_tag="VLD58_01965"
                     /inference="COORDINATES: protein motif:HMM:NF024591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53084.1"
                     /translation="PAVLEAAVIAVPHPTWLERPLAAVVLRPGHAPDVDQLKAWILEI
                     FPRWWVPEALVFVDTIPRTSTGKFLKSRLREQFAEWYAHSTATDVAP"
     gene            273..1040
                     /locus_tag="VLD58_01970"
     CDS             273..1040
                     /locus_tag="VLD58_01970"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HSB53085.1"
                     /translation="MNPLLDQSARPVIGHRGAAAYAPENTLVSFARALELGADALEFD
                     LRRSADGVPVVMHDPILDRTTDRSGPVAALTAAELGRVDAGYRFDELGERSFAFRGKG
                     IGVPTLRDVITAFPGVPLLIEIKEREVQEAVARDLIDLDATHRAVVAGDDWRSLTAFE
                     RPPFARGASRRDIAALFFHWGPPAPSCRCYAVPESYYGLPVPSRRFVNAAHRRDSTVH
                     VWTVDHAKAALALWRRGVNGIVTNRPDVIRAAHPHAA"
     gene            1096..>1713
                     /locus_tag="VLD58_01975"
     CDS             1096..>1713
                     /locus_tag="VLD58_01975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53086.1"
                     /translation="MPLLAEALDRLEQGFRALPAIGDAPPATPDRLASVLDEVATRLQ
                     DNYPYFHPLYAGQMLKPPHPVARLAYALALWINPNNHALDGGRASSAMELEAVAEMAR
                     MLGWPQHLGHLTGGGTMANLEALWVAGQLRPGAAVVASSQAHYTHSRISAVLGLPFQS
                     VGADEHGRMDLGRLEEVLAQEEVGTVVATVGTTGLGAVDPLPALLA"
BASE COUNT          239 a          615 c          587 g          272 t
ORIGIN      
        1 ccggcggtgc tcgaggccgc ggtcatcgcc gtgcctcacc ccacctggct cgaacggccc
       61 ctcgccgcgg tggtgcttcg gcccgggcac gcccccgacg tcgaccagct caaggcctgg
      121 atcctggaga tctttccccg ctggtgggtc cccgaggcgc tggtgttcgt cgacacgatt
      181 ccccgtacca gcaccgggaa gtttctcaag agcagactgc gcgagcagtt cgcggagtgg
      241 tacgcgcact cgaccgcgac ggatgtggcg ccgtgaaccc gctgctcgat caaagcgccc
      301 ggcccgtgat tggacaccgg ggcgccgcgg cctatgcccc cgagaacact ctggtctcgt
      361 tcgcccgggc gctcgagctc ggcgccgacg ctctcgagtt cgacctgcgc cgttcggccg
      421 acggggtgcc ggtcgtcatg catgatccga tcctcgaccg gaccaccgac cggagcgggc
      481 cggtcgcggc gctcacggcg gccgagcttg ggcgggtcga tgcggggtac cgcttcgatg
      541 agctgggcga gcgcagcttc gcctttcgag gcaaggggat cggtgtgcct actctgcgcg
      601 acgtgattac cgccttcccg ggcgtgccgc tgttgatcga gatcaaggag cgggaggtgc
      661 aggaggcggt cgcacgagac ctcatcgacc tggacgccac ccatcgggcc gtagttgcgg
      721 gcgatgactg gcgctcgctc accgcgttcg agcggccacc ctttgcacgg ggcgcgtcgc
      781 gcagggacat cgccgcgctt ttcttccact ggggcccgcc ggcgccgagc tgccgctgtt
      841 acgccgtccc ggagagctac tacggcctcc cggttccctc ccgccggttc gtgaacgccg
      901 cccatcgccg ggacagcacg gtgcacgtct ggaccgtgga ccacgccaag gcggcgttgg
      961 ctctctggcg ccgcggcgtg aatggcatcg tgaccaaccg acccgacgtc atccgcgcgg
     1021 cccacccgca cgccgcctga atctctcgcg accccgaccg caatgacttc atcgcagctc
     1081 ctggatcatg ccaccttgcc actgctcgcc gaagcgctcg atcggctcga gcagggattc
     1141 cgcgccctgc cggcaattgg ggatgcgcca cccgccaccc ctgaccggct ggcctcggtg
     1201 ctcgatgagg tggcgacgcg gctgcaggac aactacccct acttccaccc gctctacgcc
     1261 gggcagatgc tcaagccgcc ccatccggtg gcgcggctgg cgtatgccct ggccctctgg
     1321 atcaacccca acaaccacgc gctcgacggc ggccgggcca gctcggcgat ggagctcgag
     1381 gcggtggcgg agatggcccg gatgctggga tggcctcagc acctgggcca cctcaccggt
     1441 ggcggcacca tggccaacct cgaggcgctc tgggtcgccg gccagctccg tcccggtgcg
     1501 gcggtggtgg catcgagcca ggcgcactac acccacagcc ggatcagcgc ggtgctgggg
     1561 cttccgtttc agagtgtcgg ggcagatgag cacggtcgga tggacctggg gcggctggag
     1621 gaggtccttg cgcaggagga ggtaggcacc gtcgtggcga cagtcggcac caccggtctt
     1681 ggcgcggtgg atccgctacc cgcgctactg gcg
//
LOCUS       DATIFF010000130         6453 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2173518, whole genome shotgun sequence.
ACCESSION   DATIFF010000130 DATIFF010000000
VERSION     DATIFF010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6453
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2173518"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(82..2160)
                     /locus_tag="VLD58_01980"
     CDS             complement(82..2160)
                     /locus_tag="VLD58_01980"
                     /inference="COORDINATES: protein motif:HMM:TIGR01511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HSB53087.1"
                     /translation="MTHLFRVGGIDCPSCADVITRALTRVDGVQSVQVDLMKSEVRVE
                     AEPVATKDLLVRTLAQAGHPVHDRDGYAAGRPRGPALAAALSGVALALGLVLGWIQAP
                     LAAKAAELVALLAGGWYVFPRGLRAIRTGALDMHALMSIAALGALFIGEWAEAGAAMF
                     LFAVARLLEEWAVERARGAISALMQVTPPEATLITLEGDQVVPVSTIAVGRRIRIRPG
                     ERVPLDGRILQGHGALDESPITGESMPVEKGPGDEVFAGAINRHGSLEVRTSRVASDT
                     TLARILHRVEEAQAARAPMQTQVERFARIYTPVVVGLAALLAVAPPLLGLAGWTDALT
                     RALTLLVIACPCALVISTPVTIVSALTGSARAGALLKGGAQLESLARVTTVVFDKTGT
                     LTEGRPAVTEVIPLDGRDASEVLQLAASIEKLSEHPVARAIVEAAESRGVAMVAASSF
                     TALPGRGVRASVGASEYWLGNRRLCDESGSCRDSVHELMARLESEGKTPILVAEGTTP
                     LGLLGVADRIRPDAAAAVAALRQAGVRDVVMLTGDGESVARPVAAAVGITRVEARLLP
                     DEKHAVVQELERRGERVMVVGDGINDAPALAAASVGVAMGLAGTHVALETADVALMGD
                     DLLLLAPLIRRARRALAIVRQNIGIAVGLKVVFLGLAAAGQATLWMAVAADMGASLLV
                     IANGMRALKE"
     gene            complement(2157..4358)
                     /gene="feoB"
                     /locus_tag="VLD58_01985"
     CDS             complement(2157..4358)
                     /gene="feoB"
                     /locus_tag="VLD58_01985"
                     /inference="COORDINATES: protein motif:HMM:TIGR00437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015093 - ferrous iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HSB53088.1"
                     /translation="MATAAAPVRGKKQPELVQLGIRTGRHDFLVALAGNPNTGKSTVF
                     NALTGLRQHTGNWPGKTVARAEGVFQHAGKRVKLVDLPGTYSLQAGSTDEEVARDFIL
                     FGRPDVTLVVLDATRLERNLPLALQILEITGRVVVCLNLIDEARRHGIAVDPAKLERE
                     LGVPVVATAARQGEGIPALLDALLAVATGERTTTPRRLPAYPTEVESALGEVVPRVEA
                     VFPGLPNARWVALRLLQGDQRIETAVRSGELATYGSATGAESVSPEAVPLLFEVVDRL
                     RWRLSYSFQDSLSEGFFAAAERIARDAELRGLRRARFDFDRRLDQLLTSRTFGFPVML
                     LLLTLVFWITVAGANVPSALIAEGLIDKLQPWLKSVGTSAGFPTWLNGFLFDGVYLGT
                     AWVVSVMLPPMAIFFPLFTLLEDFGYLPRVAFNLDAMFRRAGAHGKQALTMCMGFGCN
                     AAGVVATRVIDSPRERLVAIITNNFSLCNGRWPTQILMATIFVGALAPAPVAGLVAAG
                     AVVGVAVLGILMMFFSSWLLTRTFLRGEATTFSLELPPYRPPNVLRTLYTSLIDRTLI
                     VLWRAVVFAAPAGAVIWLMSNITIGGTSIAEHVVGGLNPFGVLLGLNGVILLAYVVAI
                     PANEIVIPTVLMLTVLTGHLTGVGQGAGVMFDLQSPGEVGQLLRGAGWTALTGLNLML
                     FSLLHNPCSTTIYTIYRETGSKRWTVVATVLPVVLGFVVCFLVAQVWRLFS"
     gene            complement(4358..5413)
                     /locus_tag="VLD58_01990"
     CDS             complement(4358..5413)
                     /locus_tag="VLD58_01990"
                     /inference="COORDINATES: protein motif:HMM:NF015956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent transcriptional regulator"
                     /protein_id="HSB53089.1"
                     /translation="MLQQPAPPDPLFALTIFALVVALFSVLFWPRRGLLSRLTRVFRI
                     TERVRLEDALKQLYHATAGGRAATVETLAGSLEVRRGIAVRLVERLTERGLARAENAR
                     LTLTPAGQAYALRMVRTHRLWERYLADRSGLSPAEWHEEAERQEHSLTDAQVEALSAG
                     MGHPRYDPHGDPIPTTTGELPAHVGQHLSAFPLGEAAMVVHLEDEPAESFQRLLDLGL
                     RPGARLRLLDANPTEVRFRFDGREQVLPSVVADLITVEPLPADVVLDEEAHASLADLT
                     PGGAARVVRLSAACQGPQRRRLMDLGVVPGTIITVEFSSPGGDPGAYLIRGALIALRK
                     AQAELIQVDMVPAEAAS"
     gene            complement(5569..6039)
                     /locus_tag="VLD58_01995"
     CDS             complement(5569..6039)
                     /locus_tag="VLD58_01995"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005777 - peroxisome [Evidence IEA];
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003986 - acetyl-CoA hydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0008413 - 8-oxo-7,8-dihydroguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0009132 - nucleoside diphosphate metabolic
                     process [Evidence IEA];
                     GO_process: GO:0015938 - coenzyme A catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HSB53090.1"
                     /translation="MIIAPDPDSVLLIRRAEREGDPWSGHIGLPGGRLDPADRDLHDT
                     ALRETFEEIGWRLGPDQNLGILPDVWPRTPLPRVVVVRPYVFAVQNRPDLILSEEVAD
                     AFWVPMSQLRDPSVYRETMIELRGERRGFPAFHIGQHVVWGLTERILTPLVGMV"
     gene            complement(6144..6368)
                     /locus_tag="VLD58_02000"
     CDS             complement(6144..6368)
                     /locus_tag="VLD58_02000"
                     /inference="COORDINATES: protein motif:HMM:TIGR02605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HSB53091.1"
                     /translation="MPIYEYACTKCGKEFETLVRGDTRVACPACESAKVERKMSITAR
                     PNGVGGSPDFSRLGPPGGGGGCGGGGCGCH"
BASE COUNT         1110 a         2229 c         2239 g          875 t
ORIGIN      
        1 agaggttcgc gctgaatgtc cgccgtcatt gtgatcctct cctgtccttc cgagggagcg
       61 aagcgaccgg ggaatcccgg gtcactcctt cagggcccgc atcccgttcg cgatcaccag
      121 caggctcgca cccatgtccg cggcaaccgc catccagagc gtggcctgac ccgccgcagc
      181 cagccccagg aagacgacct tgagtccgac ggcgatgccg atgttctgcc gcacgatcgc
      241 cagcgcccgg cgggcccgcc ggatgagagg cgcgaggagc agcagatcgt cacccatcag
      301 cgccacgtcg gctgtctcca gcgccacgtg tgtgcccgcg agacccatcg ccactccgac
      361 actcgccgcc gccagtgccg gcgcgtcgtt gatgccgtca cccaccacca tcacccgctc
      421 gccccgccgc tccagctcct gcaccacagc gtgcttctcg tccggcagga gccgggcctc
      481 gacccgggtg atgccgactg ccgcggcaac cggccgggcc accgactcgc cgtctcccgt
      541 cagcatcacc acgtcgcgca ccccggcctg ccggagtgcc gcgaccgccg ccgccgcatc
      601 cggcctgatc cggtcggcca cacccaggag accgagcggc gtggttccct cggccacgag
      661 gatcggggtc ttcccttcgg attcgagccg ggccatcaac tcgtgcaccg agtcgcggca
      721 gctcccgctc tcgtcgcaga gacggcggtt gccgagccag tattccgaag cgcccacgct
      781 ggcgcgcacg ccccggcccg ggagcgcggt gaagctgctg gcagccacca tggccacccc
      841 gcgcgactcg gccgcctcga cgatagcccg ggccaccgga tgctccgaca gcttctcgat
      901 cgaagccgcg agctggagca cctcggatgc gtcccgcccg tcgagcggaa tcacctcggt
      961 cacggcgggg cgtccttcgg tgagcgtgcc ggtcttgtcg aacaccaccg tcgtcacccg
     1021 cgcgagcgac tcgagctggg ccccgccctt gaggagagcg ccggcccgtg ccgagccggt
     1081 cagggcgctc acgatggtga cgggggtcga gatgaccagg gcgcagggac aagcgatcac
     1141 gaggagcgtc agggcccggg tcagcgcatc ggtccagccc gcgagaccca ggagcggcgg
     1201 cgccacggcg aggagcgccg ccaggccgac aaccaccggg gtgtagatcc gggcaaagcg
     1261 ctccacctgg gtctgcatcg gcgcccgcgc cgcctgcgcc tcctccaccc ggtgaagaat
     1321 gcgggccagc gtggtgtccg acgcaacacg ggaagtgcgc acctcgaggc tgccgtgccg
     1381 gttgatcgca ccggcaaaga cctcgtcacc cgggcccttc tcgaccggca tcgattcgcc
     1441 ggtgatgggc gactcgtcga gggcgccgtg cccctggagg atccgtccat cgagcggcac
     1501 ccgctcgccc ggccggatgc ggatccggcg gcccaccgcg atggtggaga cgggaacgac
     1561 ctggtcgcct tcgagcgtga tgagggtagc ctcgggcggt gtcacctgca tcagggccga
     1621 gatggcgccc cgggcccgct ccaccgccca ttcctcgagc agccgcgcca ccgcgaagag
     1681 aaacatcgcg gccccggcct cggcccattc tccaatgaag agcgcgccca gtgcggcgat
     1741 cgacatcagc gcgtgcatgt cgagcgcgcc ggtccgaatc gcgcggagcc cgcgcgggaa
     1801 gacgtaccac ccacccgcga gcagggcgac cagctccgcc gccttggccg ccagcggcgc
     1861 ctggatccag ccgagcacca gccccaatgc cagggcgaca cccgacagcg ccgccgccag
     1921 cgccggtccc cgcggacggc cagcggcgta tccgtcgcgg tcatgaaccg gatgacccgc
     1981 ctgggcaaga gtgcgcacca gcagatcctt ggtggcaacc ggctccgcct cgacccgcac
     2041 ctcgctcttc atcaggtcga cctgcaccga ctggaccccg tcgacccgcg tcagcgcgcg
     2101 ggtgatgacg tcggcacagg aagggcagtc gatgccgccc acccggaaca gatgggtcac
     2161 gagaagagcc tccacacctg ggcgaccagg aagcacacca cgaagccgag caccaccggc
     2221 agcaccgtgg cgaccacggt ccaccgcttg ctcccggtct cccggtagat ggtgtagatg
     2281 gtcgtgctgc agggattatg caggaggctg aagagcatca ggttgaggcc cgtgagcgcg
     2341 gtccagccgg cgccccggag gagctggccc acctcgccgg gcgactggag gtcgaacatc
     2401 acgcccgcgc cctgccccac acccgtcagg tgaccggtca gcaccgtcag catcagcacc
     2461 gtcgggatca cgatctcgtt cgccgggatc gcgacgacgt aggcgaggag aatcacacca
     2521 ttgagtccga gcaggacccc gaacgggttg agcccgccca ccacgtgctc cgcgatgctg
     2581 gtgccaccga tggtgatgtt gctcatcagc cagatgacgg cgccggccgg cgcagcgaag
     2641 accaccgcgc gccagagcac gatgagcgtg cggtcgatca gcgaggtgta gagcgtccgg
     2701 agcacattgg gcggacgata gggcggcagc tcgaggctga aggtggtcgc ctcaccgcgg
     2761 aggaaggtgc gggtgaggag ccagctcgag aagaacatca tcaggatgcc gagcaccgcc
     2821 accccgacga ccgcgccggc cgccaccagc ccggccaccg gcgcgggcgc cagcgccccg
     2881 acgaagatcg tcgccatcag gatctgagtt ggccagcgcc cgttgcagag cgagaagttg
     2941 ttggtgatga tcgcgaccag ccgctcccgc gggctgtcga tcacccgggt agccaccacc
     3001 cccgccgcgt tgcagccgaa tcccatgcac atcgtcagcg cctgcttgcc atgcgccccg
     3061 gcccggcgga acatcgcgtc gagattgaac gcgacccgcg gcaggtaacc gaagtcctcg
     3121 agcagggtga agagcgggaa gaagatcgcc atcggcggca gcatgacgct gacgacccac
     3181 gcggtgccga ggtagacgcc gtcgaacagg aagccgttga gccaggttgg gaaaccggcg
     3241 ctcgtcccca cgctcttgag ccacggctgg agcttgtcga tcaacccctc ggcgatcagc
     3301 gccgacggca cattcgcccc cgccaccgtg atccagaaga ccagggtgag gaggaggagc
     3361 atcaccggga agccgaaggt acggctggta aggagctgat ccagacgccg gtcgaagtcg
     3421 aaccgggccc gtctgaggcc gcggagctcg gcatccctgg cgatccgctc cgccgcggcg
     3481 aagaaccctt cggagagact gtcctggaag ctgtagctca ggcgccagcg cagccggtcg
     3541 accacctcga agagcagagg cacggcctcg ggcgaaaccg attcggcgcc ggtcgcggat
     3601 ccgtaggtgg cgagctcgcc actccgcacc gccgtctcga tccgctggtc gccctggagc
     3661 aggcggagcg ccacccagcg ggcgttgggg agtccgggaa agaccgcttc gacgcgcggc
     3721 acaacctcgc cgagcgccga ctccacttcg gtggggtagg cggggagacg acgcggcgtg
     3781 gtggtccgct cgccggtggc aacggccagc aacgcatcga gcagcgccgg gatgccttcg
     3841 ccctgacgag cggcggtggc aactacaggg acaccgagct cacgctcgag cttggcagga
     3901 tcaaccgcga tgccatgccg ccgggcttcg tcgatcaggt tgaggcagac caccactcgg
     3961 ccagtgatct cgaggatctg gagcgcgagc gggaggttgc gctcgagccg ggtggcatcg
     4021 agcaccacca gcgtcacgtc gggccggccg aagaggatga agtcgcgcgc cacctcttcg
     4081 tcggtgctgc cggcctggag cgagtaggtg ccgggaaggt cgaccagctt cacccgcttg
     4141 ccggcgtgct ggaatacacc ctcggcgcgg gcgacagtct tgccgggcca gttgccggtg
     4201 tgctggcgca ggccggtgag cgcgttgaag actgtactct tcccggtgtt ggggttgccg
     4261 gccagggcaa ccaggaagtc gtggcgaccg gtgcggatgc cgagctgcac cagctcgggc
     4321 tgctttttgc cgcggaccgg agctgcagcg gtagccatca gctcgccgcc tcggcgggga
     4381 ccatgtcgac ctggatcaat tccgcctgag ccttccggag cgcgatcagc gccccccgaa
     4441 tgagatacgc gccggggtca ccaccggggc tgctgaactc caccgtgatg atggtgccgg
     4501 gcacgacgcc cagatccatc agacggcgcc gctggggacc ctgacaggca gccgagagac
     4561 ggaccacgcg ggccgcgcca ccgggcgtga ggtcggccag cgaggcatgc gcctcttcgt
     4621 cgagcaccac gtcggccgga agcggctcca cggtgatgag gtcggcaacg accgagggca
     4681 ggacctgctc tcgcccgtcg aagcggaaac ggacctcggt cgggttggcg tccaggagcc
     4741 ggagccgcgc gccggggcgg agccccagat cgagcagccg ctggaagctc tcggccggct
     4801 cgtcctccag atgcaccacc atggcggcct ccccgagagg aaaggccgag aggtgctggc
     4861 cgacgtgagc cggcagctcg ccagtggtgg tcggaatcgg atcgccgtgc gggtcgtagc
     4921 ggggatgacc cattcctgcg gaaagggcct ctacctgtgc gtcggtaagc gaatgctcct
     4981 gccgttccgc ttcctcatgc cattccgcgg gagacaggcc ggaacgatcg gcgaggtagc
     5041 gctcccacag ccggtgggtg cgtaccatcc gtagcgcgta ggcctggccg gcgggtgtga
     5101 gtgtcagacg ggcgttctcg gcccgggcga gaccgcgctc ggtgagccgt tccaccagcc
     5161 gcaccgcgat gccccggcgc acttcgaggc tcccggcgag ggtctcgacc gtcgcggcgc
     5221 ggccgccggc ggtggcgtga tagagctgct tcagggcgtc ctcgaggcga acccgctcag
     5281 tgatccggaa tacccgggtg agacggctca gcaggccacg ccgaggccag aacagcacgg
     5341 agaaaagcgc caccaccagc gcgaagatgg tgagggcgaa cagtggatcg gggggggcgg
     5401 gctgctgcag caaagactca acctgaaagt agtgttggct agaagttagt ttagggtgtg
     5461 cgaaatttag cgacaagagg tcgcgggtca agggtcgtgg gtaatgggtc acgggtcatg
     5521 gcgactggga gtaccctcga ccctagaccc tcgacccgtg acccaacatc agaccatccc
     5581 caccaacggc gtcaggatcc gctcagtcag cccccacacc acgtgctggc cgatatgaaa
     5641 agcgggaaag ccgcggcgct cgccccggag ctcgatcatc gtctcgcggt agaccgacgg
     5701 atcgcggagc tgggacatcg ggacccagaa cgcgtcggcc acctcttcgc tcaggatcag
     5761 gtcgggccgg ttctgcaccg caaagacata ggggcgaacc acgacgacgc gggggagtgg
     5821 ggtgcggggc cagacatcgg ggaggatccc gaggttctga tcggggccga gccgccagcc
     5881 gatctcttcg aaggtctcgc ggagggcagt gtcgtggaga tcgcggtcag cggggtcgag
     5941 tcgtcccccg ggcaagccga tatggccgct ccagggatcc ccttcccgtt cggcgcggcg
     6001 aatcagcagc accgaatcgg gatccggcgc gatgatcacc gcaactgcag cccagttcgt
     6061 ggtcggatcg agcggtgccg acgattcgac cgaagcgccg gcgagaccga ggagtcccgc
     6121 cgcgatccgg cgctgtactt cggtcagtgg cagccgcagc ctccgccgcc acacccgccg
     6181 ccaccgcccg gaggaccgag ccgggagaag tcagggctgc cgccgacccc gttgggacgg
     6241 gcggtgatgg acatctttcg ctcgaccttg gcgctctcgc aggcgggaca tgccacccgg
     6301 gtgtcgcccc ggaccagggt ctcgaattcc ttgccgcact tggtgcaggc gtattcgtag
     6361 atgggcatgg ggggaatata gatgtgtggc ggttcgcgga tggtcgaggt cagagggtcg
     6421 aggtcagagg gtcgagggct aggggtcgag ggt
//
LOCUS       DATIFF010000131         1177 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_481091, whole genome shotgun sequence.
ACCESSION   DATIFF010000131 DATIFF010000000
VERSION     DATIFF010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1177
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_481091"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..>1177)
                     /locus_tag="VLD58_02005"
     CDS             complement(104..>1177)
                     /locus_tag="VLD58_02005"
                     /inference="COORDINATES: protein motif:HMM:NF033592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HSB53092.1"
                     /translation="SRAGRASQRRRRLPAESVIWLVIAMALFAADSIPKVGRRLHPTR
                     DEPEPDDSAFTQARRRLGVAPLRQLFLETARPMATHQTIGAFYRGWRLMGLDGTTLDL
                     PDTPENARTFGRPTTGRADGAFPQVRLLALCELGTHAVCGLTLKPICHGEPSMVAPLL
                     DHLRPGMLLIWDRGFFSYELIRSVCKRGAHLLARVKSNTVLRPIRRFADGSYLAKIYP
                     SQADRRRDMRGLPVRVIEYTHDDPNRPGVGERHRLITDLTNPEDLPAHEAPLVSHERW
                     EQELAFDEIKTHLSVRAVPIRSKTPAGVVQEVYGLMLAHYVVRRVMHDAAVAASQDPD
                     RLSFLDSLRVLQCQRVYEKPVWP"
BASE COUNT          176 a          371 c          437 g          193 t
ORIGIN      
        1 gccttgggca gccgccgctt gagcttctgc cactggttgc gggtcaggtc ggagggggag
       61 cgctgggggt tggccccaat ttgtttggct ttcatgctga attctagggc caaaccggct
      121 tttcgtacac cctctgacac tgcagcactc gtagcgagtc gaggaacgac agccggtcgg
      181 ggtcctggct ggccgcgacc gccgcgtcgt gcatcacccg ccgcaccacg tagtgggcca
      241 acatcagccc gtagacctct tgcaccacac ccgccggggt cttgctccgg attgggacgg
      301 ctcggacgct gaggtgggtc ttgatctcgt cgaaggccag ctcctgctcc caccgctcgt
      361 gagagaccaa cggggcctcg tgcgcgggta ggtcctcggg attggtcagg tcggtgatca
      421 gccggtgtcg ctcccccacc ccggggcggt tcgggtcgtc gtgggtgtac tcgatgaccc
      481 gcaccggcag gccgcgcatg tcccggcggc ggtcagcttg gctcgggtag atcttggcca
      541 ggtaggagcc gtcggcgaag cgacggatcg gccgcagcac ggtgttgctc ttgacccgcg
      601 ccagcaggtg ggctcctcgc ttgcacaccg agcgaatcag ctcgtagctg aagaatccgc
      661 ggtcccagat caggagcatg ccgggcctga ggtggtcgag caacggagca accatcgacg
      721 gctcgccatg acagatcggc ttgagagtca gcccgcagac ggcgtgcgtg cctagctcgc
      781 acagcgccag caggcggact tgggggaagg ctccgtcggc ccgcccggtc gtcggccggc
      841 cgaaggtgcg ggcgttctcc ggggtgtcgg gcagatcgag cgtggtgcca tcgaggccca
      901 tcagtcgcca gccgcggtag aaggccccga tggtctggtg ggtggccatg ggccgggccg
      961 tctcgaggaa cagctggcgg agcggtgcga cgccgagccg gcggcgggcc tgagtgaagg
     1021 ccgagtcatc gggctcaggc tcatcgcgcg tggggtggag ccgccgcccg accttgggga
     1081 tcgaatcggc ggcgaacagg gccatggcaa tgaccagcca gatgaccgac tcggccggca
     1141 ggcgacgtcg gcgttgggag gcgcggccgg cccgtga
//
LOCUS       DATIFF010000132         1164 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1404413, whole genome shotgun sequence.
ACCESSION   DATIFF010000132 DATIFF010000000
VERSION     DATIFF010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1404413"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(130..867)
                     /gene="cybH"
                     /locus_tag="VLD58_02010"
     CDS             complement(130..867)
                     /gene="cybH"
                     /locus_tag="VLD58_02010"
                     /inference="COORDINATES: protein motif:HMM:TIGR02125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase, b-type cytochrome subunit"
                     /protein_id="HSB53093.1"
                     /translation="MTNATQSQGFTLRHEVGPRSGDYRWIYIWHWPIRAMHWIAAVSI
                     VVLAVTGLYIGRPYFAPAPGPTTPYLMGWIRFSHFAAAAALVATAIIRFYWLFAGNRF
                     ERLPALFPVRPRDWVNLVKQIKFYLLIHPERAPRYIGHNPLQQLSYTAIYAVAAVSVV
                     TGFALYGQANPGGLFFQVFGWLGPAFGGMQNIRFVHHVATWAFLIFIPIHVYLAVRAD
                     VLEHGGSISSIITGGRFVPSDHTYVDE"
     gene            complement(864..>1164)
                     /locus_tag="VLD58_02015"
     CDS             complement(864..>1164)
                     /locus_tag="VLD58_02015"
                     /inference="COORDINATES: protein motif:HMM:NF012592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HSB53094.1"
                     /translation="EGYGFLDAPRGALGHWVQIENGVISRYQCVVPSTWNCSPRDKEG
                     QLGPYEASLTDNHPLVRPEQPLEILRTIHSFDPCMACGVHVLDTAGGLVTEVMVQ"
BASE COUNT          211 a          378 c          412 g          163 t
ORIGIN      
        1 tccgcagcct cgacgcccgg aggcagggcc cagtccgcca gcagccgctc cagcaccgcg
       61 aggccgaacc cgtcgtctcc catgatcgga ttgcccagtc cgaggaccag cgtggagccg
      121 gtccgcgcct cactcatcga cgtaggtgtg atccgagggc acaaagcgac cgccggtgat
      181 gatcgacgag atcgagccgc cgtgttccag cacgtccgcc cgcacggcca gatacacgtg
      241 gatggggatg aagatgagaa aggcccaagt ggccacgtga tggacgaacc ggatgttctg
      301 catccctccg aacgcggggc cgagccagcc gaacacctgg aagaacaagc cgccgggatt
      361 cgcctggccg tacagcgcaa agccggtcac cacgctcacg gcggccacgg cgtagatcgc
      421 ggtgtagctg agctgctgga gcgggttgtg gccgatgtag cggggagcgc gctcgggatg
      481 gatcagcagg tagaacttga tctgcttgac cagattcacc cagtcccggg ggcgcaccgg
      541 gaacagcgcg gggagccgct cgaacctgtt cccggcgaag agccagtaga accggatgat
      601 cgcggtcgcg accagcgccg cggcggcggc gaagtgagaa aagcggatcc agcccatcag
      661 gtacggcgtc gtcggtccgg gcgcgggcgc gaagtacggc cggccgatgt agagcccggt
      721 cactgccagc accacgattg acacggcggc gatccagtgc atcgcccgga tcggccagtg
      781 ccagatatag atccaccggt agtcccccga gcggggcccc acctcatggc gcagggtgaa
      841 gccctggctc tgcgtggcgt tggtcattgg accatcacct ccgtgaccag gccgccggcg
      901 gtgtcgagca cgtgcacgcc gcaggccatg caggggtcga aggaatggat ggtccgcagg
      961 atctcgagcg gctgctccgg gcgcaccagc gggtggttgt ccgtgagcga ggcctcgtac
     1021 gggccgagct ggccctcctt gtcccggggc gagcagttcc aggtgctggg gacgacgcac
     1081 tggtagcgcg agatgacccc gttctcgatc tggacccagt ggccgagggc gccgcggggc
     1141 gcgtcgagga acccgtaccc ttcc
//
LOCUS       DATIFF010000133         1400 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_20154, whole genome shotgun sequence.
ACCESSION   DATIFF010000133 DATIFF010000000
VERSION     DATIFF010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1400
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20154"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            19..1371
                     /locus_tag="VLD58_02020"
     CDS             19..1371
                     /locus_tag="VLD58_02020"
                     /inference="COORDINATES: protein motif:HMM:NF016994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="erythromycin esterase family protein"
                     /protein_id="HSB53095.1"
                     /translation="MPPVADSETLAALGRALHLLEGTPRDFDPLLRRAAGASVVLLGE
                     ASHGTHEFYRVRAEITKRLIREHGFSAVAVEADWPDAYRVNRFVRGRPGDEDSEEALG
                     GFRRFPQWMWRNADVLDFVGWLRAHNETLSGPDAGVGFYGLDLYSLHTSMAAVIEYLH
                     LVDPAAAERAARRYSCFDHFGQDPQEYGYAATAGLSPSCEREVLSQLVELRAAATEYA
                     RRDGRVAPDDLFFAERNAQVVATAERYYREMFLSHAGSWNLRDRHMAETLEALLRFLE
                     SRGRAPRVVVWAHNSHQGDARATELSHRGEVTLGQLARERWGERALLVGFTTWTGSVT
                     AASDWGGPVERKGVRPALADSYEALFHGAGGFNFYLDLGTRSEAVQALKTPRLERAIG
                     VIYRPETERLSHYFHARLPDQFDAVFHYDHTRAVEPLERTPVWERGTAELPETFPSAL
                     "
BASE COUNT          212 a          477 c          488 g          223 t
ORIGIN      
        1 gcccgctgga ggtgaaccat gccgccggtg gctgacagcg aaacactggc cgcgctgggc
       61 cgggccctgc atctgctcga gggtacgcca cgcgatttcg acccgctgct gcggcgcgcc
      121 gccggcgcgt cggtagtcct cctgggcgaa gcctcccacg ggacccacga gttctaccgg
      181 gtgcgggccg aaattaccaa acggctgatc cgggagcatg gcttcagcgc ggtcgcagtg
      241 gaagccgact ggcccgatgc atatagggtc aaccgcttcg tgcgtgggcg ccctggggat
      301 gaggatagcg aggaagccct gggtggcttc cggcgctttc cccagtggat gtggcgcaat
      361 gccgatgtgc tcgatttcgt ggggtggctc cgggcccaca atgagacact ctccggaccg
      421 gacgccgggg tcggcttcta cgggctggat ctctacagcc tgcacacctc gatggccgcc
      481 gtgatcgaat acctgcatct ggtggacccg gccgcggccg agcgggccgc gcggcgttac
      541 tcctgcttcg accatttcgg gcaggatccc caggagtacg gctacgccgc caccgccgga
      601 ctttcgccct cgtgcgagcg cgaggtcctg agccagctgg tcgagctccg ggccgcggcc
      661 accgaatacg cccgccgtga cggacgggtg gcgccggacg atctcttctt cgccgagcgg
      721 aatgcccagg tcgtggcgac agcggagcgc tactaccgcg agatgttcct cagccatgcg
      781 ggctcctgga acctgcggga ccggcacatg gccgagacgc tcgaggcgct gcttcgcttc
      841 ctggaatcgc gcggccgtgc gccccgggtg gtggtgtggg cccacaactc ccaccagggc
      901 gatgcccgcg ccaccgagct ttcccatcgg ggcgaggtta ccctgggaca gctggcccgg
      961 gaacgctggg gcgagcgggc cctgctggtt gggttcacca cctggaccgg gagcgtcaca
     1021 gccgcctcgg actggggcgg accggtcgag cgtaagggtg tgcgcccggc actggccgac
     1081 agctatgagg cgctcttcca cggcgccggc gggttcaact tctacctcga cctggggacc
     1141 cggagcgaag cggtacaggc attgaagaca ccccggctgg agcgggccat cggggtcatc
     1201 tatcggcccg aaaccgagcg gctgagccac tacttccacg cgcggctgcc ggatcaattc
     1261 gacgcggtct tccactacga ccacacccgc gccgtggagc cgctcgagcg caccccggtc
     1321 tgggagcgtg gcaccgccga acttccggag accttcccct cggcgttgta gcgagtcggg
     1381 aagagcaggg atccctcgct
//
LOCUS       DATIFF010000134         7233 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1866204, whole genome shotgun sequence.
ACCESSION   DATIFF010000134 DATIFF010000000
VERSION     DATIFF010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7233
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1866204"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..706)
                     /locus_tag="VLD58_02025"
     CDS             complement(<1..706)
                     /locus_tag="VLD58_02025"
                     /inference="COORDINATES: protein motif:HMM:NF039704.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6252 family protein"
                     /protein_id="HSB53096.1"
                     /translation="MRWIGGVVGTAGLVLAGACGGGGDSNGPGGGSGFSAIIDGQAWE
                     ATPISIGANPVNALPGTLIITGVQTIGNVSTGVTITLYNISGPGTYPLGVSSNVFGGI
                     GTVGEAGDAWITDNIGTAGSLTITTLTASHITGSFAFVAAPGHQNTQTNSRVVTNGRF
                     DLPFGGALMPVPPNVGSKVTATLGGTNYIAWAVDGLLQDHLGGAGFQFSSSTKDHGLD
                     ILLSGVTQPGTYTLSNT"
     gene            complement(761..1180)
                     /locus_tag="VLD58_02030"
     CDS             complement(761..1180)
                     /locus_tag="VLD58_02030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53097.1"
                     /translation="MARLVSRSGKVSRLSYEVSGVRDGEEVPRHPYYLLDFLVNDAPA
                     RFRGYPIVGDGDFVTVAGFEADGVLNALAIRNRSTGVDYGEPSPFLYMACVAAAVVGL
                     LTARYGLGLALLAVALWLGGRLRRSTRALSMVRAPEA"
     gene            1278..1805
                     /locus_tag="VLD58_02035"
     CDS             1278..1805
                     /locus_tag="VLD58_02035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF-type sigma factor"
                     /protein_id="HSB53098.1"
                     /translation="MITPMPDTALDQVFSLAYEELRRLAATVRRDDPGATMSPTDLVN
                     EAWLKLRNSPGLADTSRLHFKRVAARAMRQVLIEAARRRKAGKRGAGVTPVTLDDALD
                     GLADSSTDLLALNDALEDLARLHPRQAALVENRFFGGLEMGEIAELLEISEATALRDW
                     RAARAWLARELRRPA"
     gene            1812..4442
                     /locus_tag="VLD58_02040"
     CDS             1812..4442
                     /locus_tag="VLD58_02040"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSB53099.1"
                     /translation="MDAARWERIQSLFHAAADLAPEAQQALLQAEAGDDPELIAEVRA
                     LLREDAKEHPLLDQDRARLAGGMLASDTQLPTTRFGPYRVTRLLGEGGMGVVYLGQRD
                     DLGSVAAIKILRDAWLSPARRERFESEQRTLAQLNHPSIARLYDADALPDGTPWIAME
                     YVDGVAITDWCDQRNATVQERLRLFHTVCEAVQHAHRHAIIHRDLKPSNILVTADGAV
                     KLLDFGIAKQLESLDLPADQTQTGLRLLTPAYAAPEQIRGSRVGIYTDVYALGVILYQ
                     LLTGRLPFDLTDRTPEEAARIITEEAAERPSSAARKGAAALTSSGWADLDVLCLTAMH
                     RDPQRRYRTVEALLRDVDHFLDAEPLEARPDTLGYRAGKFIRRNRAAVLASALVVGTI
                     TAVVIFYTVRLTRARNEARAEAARTQRIQRFMVNLFQNGDESTAPGDSLRVVTVIDRG
                     LVEAQSLAEDPVLQSELDLTLGVLYQQLGKYERADSLLNAALTIRQRVLGQDDPEVAP
                     ALVSLGELRLKQARYDESERYIREGLTLAERRYAPGHPAIARATSALGQVLVERGQYD
                     SAVPILEQAIRLQAARDTSSADYASAIGDLANAHFYAGHYPLADSLYTRVLGMSRRLY
                     GDRHPHVAEDLSNLGQIQQMLGTYAKAEEYYRRAYDIAQGWYGTNHPETASYLTMVGR
                     SLLFQNKFDSAKAALSQALAIQEQLHGPNHPEVANALNELGSLAWQRDQLDEAERSWR
                     RVIDIYRSAYGEKHQFVAVALSNLSGVYQQRKEYPRAEALLREALGIYTGILSPEHVN
                     VAIGHIKLGRVLLRSGRYGEAVKETTQGYDILVKQADPAVSFIKAARKDLVAAYDSLR
                     QPEKAEKYRRELADTLAARQ"
     gene            complement(4569..5993)
                     /locus_tag="VLD58_02045"
     CDS             complement(4569..5993)
                     /locus_tag="VLD58_02045"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSB53100.1"
                     /translation="MRLVSGVAAGAMLVAAGSLAAQRPVLSDRVKQQYVAIDSSVIAI
                     TGVTVIDGRGGAALRGQTVVIRDGKIADVGAGAKVPAGAHQIDGSGMTLIPGMVGMHD
                     HMFYTAAGGHANQMSFTAPRLYLASGVTTVRTTGSRSPYADINLRKAVDSGFVPGPRM
                     HVTTPYLTGGAGGGSMFATDDPEAARRFVAYWASEGVTWVKFYTDVSRASMKAAIEEA
                     HKHGMKATGHLCSVTFSEAMDLGLDDFAHGVLTSTDFVAGKEPDKCPTNNLKLADSLA
                     SGDSPAAKALIAKMVKKGVSMTTTMPVYEALYPHRPVTDERSLELMTPEVRTAYIANR
                     QFIDSASTWVLTTAGFSRALAFDKAFYAAGGLLGNGVDPTGNGGALPGFGDQRGYELL
                     REAGLTAEQAVQVVTLNGAKILGVAKTLGSVEKGKLADLVLLQGDLTTDPSVIRNVVA
                     VFKDGYGYDPKKLIDAVRGRVGID"
     gene            complement(5994..>7233)
                     /locus_tag="VLD58_02050"
     CDS             complement(5994..>7233)
                     /locus_tag="VLD58_02050"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="multicopper oxidase family protein"
                     /protein_id="HSB53101.1"
                     /translation="WHGIRLENAFVGVPNLTQPAVPPGGTFVYRIRFPDAGIFWYHPH
                     VREDAQQDLGLYGNLFVQSPPGTAPGPAREEFLILDDLLVGAGGLVPYGKDGSTHAAM
                     GRFGNVMLVNGESGWRGSVRGGEVVRFYLTNVANTRTFNLSFGDGSRIKVVGSDQGRY
                     AREAWVSSVVIAPAERYVVDVHFPGRGEAALVNRVRAIDHLYGRFFAVTDTLGRISIA
                     GQAPPYVAFGQLLTSPEAATLDSLVAAHADEAPEHSLELRVAFNGLPFVSEQLMRLDS
                     IYFNPVEWEGTMPGMNWATTSRQARWILRDLASGAENMDIHWRFRRGTLTHIRLAGAR
                     NTLHGMQHPIHLHGQRFLVLSVNGVRNRNPVWKDTVLVPAGAAVDILAEMSNPGSWML
                     HCHIAEHLESSMMMHFDVEE"
BASE COUNT         1189 a         2559 c         2363 g         1122 t
ORIGIN      
        1 cggtgttgct cagggtgtag gtcccgggct gggtcacccc gctcagcagg atgtcgagcc
       61 cgtggtcctt ggtgctgctg ctgaactgga agccggcccc acccaggtga tcctgcagca
      121 gcccgtcgac cgcccaggcg atgtagttcg tccctcccag tgtggccgtc accttgctcc
      181 cgacattggg cggcaccggc atgagggccc cgccgaaggg aaggtcgaac cgcccgttcg
      241 tcaccacccg ggagttggtc tgggtgttct ggtgaccggg tgccgccacg aatgcgaagc
      301 tgccggtgat atggctggcc gtgagcgtcg tgatcgtcag actgccggcg gtgccgatgt
      361 tgtcggtgat ccaggcgtcc ccggcctcgc ccaccgtgcc gatgccgccg aagacgttgc
      421 tgctcacccc cagcgggtag gtgccggggc cgctgatgtt gtagagggtg atggtcacac
      481 cggtgctcac gtttccgatg gtctggactc cggtgatgat cagggtaccg ggcagggcgt
      541 tgaccggatt ggccccgatg ctgatcggcg tcgcctccca tgcctgaccg tcgatgatgg
      601 cgctgaaccc gctgccgccg cccgggccat tggagtcgcc acccccgccg caggcgcccg
      661 cgagcaccag acccgccgtc ccgaccactc cgccgatcca ccgcataggc gctccgttga
      721 ggtctccagt cctcgttgcg cagaaggctt ccagaaacct tcatgcctcc ggagcgcgaa
      781 ccatggacaa ggcgcgggtg gagcgccgga gccggccgcc gagccacaag gcgacggcga
      841 gcagcgccag cccaaggcca tagcgcgcgg tcaggaggcc caccacggcc gccgcgacac
      901 acgccatata gaggaaaggc gaaggctccc cgtagtcgac cccggtggag cggttccgga
      961 tggcgagggc gttgagcacc ccgtccgcct cgaacccggc gaccgtgacg aagtcaccgt
     1021 caccgacgat ggggtaaccc cggaaacggg cgggagcgtc attgaccagg aagtccagca
     1081 ggtagtaggg gtggcggggg acctcttcgc cgtcgcgcac cccgctgacc tcgtaggaga
     1141 gccggctgac cttccccgac cgtgagacca gccgtgccat ctcgggctcc acgaaggcgt
     1201 tcggtagcct tgcgcagaac cggcggatgg tccgtcatgc gggatcagtt cgccttgcgg
     1261 gaatcggacc ggggggtatg atcacgccaa tgcccgatac cgcgctcgac caggtcttca
     1321 gcctggccta cgaggagctc cgccggctcg ccgccacggt gcgccgcgat gacccgggcg
     1381 cgaccatgag tcccaccgac ctggtcaacg aggcctggct caagctccgg aactcccccg
     1441 gcctcgccga cacctcgcgg cttcacttca agcgggtggc cgcccgcgcc atgcgccagg
     1501 tgttgatcga agccgcccgc cgccgcaagg cgggaaagcg cggcgccggc gtcacgccgg
     1561 tgaccttaga cgatgccctc gacgggctgg ccgacagctc caccgatctc ctcgccctca
     1621 acgacgcgct cgaagacctg gcccggctcc accctcggca ggccgcactg gtggagaacc
     1681 gtttcttcgg tggactggaa atgggagaga ttgccgagct gctggagatt tccgaggcaa
     1741 cggcgctccg cgactggcgg gccgcgcggg cctggctggc ccgcgagctc cgccggcccg
     1801 cctgaccgac catggacgcc gcccgctggg agcggatcca gtcgctcttt catgccgccg
     1861 ccgacctcgc gcccgaggcg caacaggcgc tgctccaggc cgaggccggt gacgaccccg
     1921 agctgattgc cgaagtcagg gccctgctca gggaggatgc gaaggagcac ccgctgctgg
     1981 accaggaccg cgcccgcctc gcaggcggca tgctcgcgtc ggacacccag ctccccacca
     2041 cccgcttcgg cccttaccgc gtcacccgcc tcctgggcga gggcgggatg ggcgtggttt
     2101 acctgggcca acgcgacgat ctcggcagcg tggccgcgat caagatcctg cgtgacgcct
     2161 ggctctcgcc ggcccggcgg gaacgcttcg agagcgagca acgcactctg gcgcagctca
     2221 atcatccgag catcgcccgg ctctacgatg ccgacgccct gccggacggc acgccctgga
     2281 tcgcgatgga gtacgtcgac ggggtcgcga tcaccgactg gtgtgaccag cggaacgcca
     2341 ccgtgcagga gcggctccgc ctctttcaca cggtgtgcga ggcggtgcag cacgcccacc
     2401 ggcacgcgat catccatcgc gacctcaagc cgtccaacat cctcgtgacg gccgacggcg
     2461 cggtgaagct gctcgacttt ggcattgcga agcagctgga aagcctcgac cttcccgccg
     2521 atcagaccca gaccggtctc cgactcctca cccccgccta cgccgcgccg gaacagatcc
     2581 ggggtagccg cgtcggcatc tacaccgacg tctacgccct tggcgtcatc ctgtatcagc
     2641 tgcttaccgg acggctgccc ttcgacctga ccgaccgcac cccggaagag gccgcccgga
     2701 tcattaccga ggaagcagcg gagcggccgt catccgcggc gcgcaagggc gcggcggccc
     2761 tcacctcgtc cggctgggcc gatctcgacg tgctctgcct taccgcgatg caccgcgacc
     2821 cccagcgccg ctaccgcacg gtggaagcgc tgcttcggga cgtcgatcac ttcctcgacg
     2881 ccgagccgct ggaggcgcgg cccgatacac tgggctaccg cgccgggaag ttcatccgga
     2941 gaaaccgggc ggcggtgctg gccagcgcgc tggtggtggg tacgatcacc gcggtggtca
     3001 tcttctacac cgttcgcctc acccgggccc gcaacgaggc ccgcgccgaa gcggcgcgaa
     3061 cccagcggat tcagcgcttc atggtgaatc tcttccagaa cggggatgag tcgaccgcgc
     3121 cgggcgacag cctgcgcgtg gtcaccgtga tcgaccgtgg cctggtcgag gcgcagtcac
     3181 tggcggagga tccggtgctc cagtcggagc tcgaccttac gcttggggtg ctgtaccagc
     3241 agctcggcaa gtatgagcgg gccgactcgc tgctcaacgc cgctctcacc atccggcaac
     3301 gggtgctggg tcaggacgac ccggaggtgg cgccggcact ggtctcgctg ggcgagcttc
     3361 ggctcaagca ggctcgctat gacgagtcgg agcgatacat ccgtgagggt ctgaccctgg
     3421 ctgagcggcg ctatgctccc ggacacccgg ccatcgcgcg ggcaacgtcc gccctgggcc
     3481 aggtgttggt cgagcgaggg caatacgact ccgcggttcc gatcctcgag caggccatcc
     3541 ggctccaggc cgcccgcgat acctcctccg ccgactacgc ctcggccatc ggcgacctgg
     3601 ccaacgccca cttctatgcc gggcactatc cgctggcgga cagcctctac acccgggtgc
     3661 tcggcatgag ccgccgcctc tacggcgatc gccatccgca cgtggccgag gatctctcga
     3721 acctgggaca gattcagcag atgctcggga cgtatgccaa ggcggaggag tactaccggc
     3781 gggcgtacga catcgcgcag ggatggtacg gcaccaatca ccccgagacg gcttcctacc
     3841 tcaccatggt ggggcgctcg ctcctcttcc agaacaagtt cgacagcgcc aaggcggcgc
     3901 tctcccaggc cctcgccatc caggagcagc tgcacggccc gaaccacccc gaggtggcca
     3961 acgcgctcaa cgagctcggc tcgctggcct ggcagcggga ccagctggac gaagcggagc
     4021 ggagctggag acgggtgatc gacatctacc ggtcggccta cggggagaaa caccagttcg
     4081 tggcggtggc gctctccaac ctctccgggg tctatcagca gcggaaggag tatcccaggg
     4141 cggaggcgct gctccgggaa gcgctcggca tctacaccgg gattctctca ccggagcatg
     4201 tgaacgtagc catcggccac atcaagctcg ggcgggtcct gctccggtca gggcgctacg
     4261 gcgaggcggt gaaggagacg acccaggggt acgacatcct ggtgaagcag gcggacccgg
     4321 ccgtcagctt catcaaggcg gcgcgaaagg acctggtcgc ggcgtacgat tcgctgcgtc
     4381 agccggagaa ggcggagaag tatcgtcgtg aactggcgga cacactggca gcgcggcagt
     4441 aacgacaacg caggagcgcg aaaggccgga ggcgggaggc gggcggaggc cggagtgttt
     4501 ctgcccctgc ctccgccggc ctccagcctc ctgcctccgg tccaccgcgt cctcagcctt
     4561 gtacctcgtc agtcgatccc cacccgcccc cgcaccgcgt cgatcagctt cttgggatcg
     4621 tagccgtacc cgtccttgaa caccgccacc acattccgga tcaccgacgg gtcggtcgtg
     4681 agatcgccct gcagcagcac caggtcggcg agcttgccct tctccaccga gcccagcgtc
     4741 ttcgccacgc cgaggatctt cgccccgttg agcgtcacca cctgcaccgc ctgttcggcg
     4801 gtgaggccgg cctcgcgcag gagttcgtag ccccgctgat cgccgaagcc ggggagcgcc
     4861 ccgccgttcc cggtgggatc gacgccattt ccgagcagcc cgcccgcggc gtagaacgcc
     4921 ttgtcgaacg cgagcgcccg ggagaatccg gcggtggtga gcacccaggt cgacgccgag
     4981 tcgatgaact gccggttggc gatgtaggca gtgcgtacct cgggagtcat cagctcgagc
     5041 gagcgttcgt cggtgaccgg ccggtgggga tagagcgcct cgtagaccgg catggtggtc
     5101 gtcatcgaga cccccttctt caccatcttc gcgatcagcg ccttggccgc cgggctgtca
     5161 ccgctggcca gtgagtcggc caacttgagg ttgttggtgg gacacttgtc cggctccttc
     5221 cccgcaacga agtctgtcga cgtcagcaca ccgtgggcga agtcatcgag cccgaggtcc
     5281 atcgcctcgc tgaaggtcac cgaacagaga tgcccggtgg ccttcatccc gtgcttgtgg
     5341 gcctcctcga tcgcggcctt catcgaggcc cgcgacacgt cggtatagaa cttgacccag
     5401 gtcacccctt cgctggccca gtaggccacg aagcgccggg ccgcctccgg atcgtcggtg
     5461 gcgaacatcg acccaccgcc cgcgccgccg gtgagatagg gcgtggtgac gtgcatcctc
     5521 ggccccggta cgaagcccga atcgaccgcc ttccggaggt tgatgtcggc gtagggtgaa
     5581 cggctccccg tcgtccggac cgtcgtgacg ccgctggcga ggtagagccg gggcgccgtg
     5641 aagctcatct ggttggcgtg gccgccggcc gcggtgtaga acatgtggtc gtgcatcccg
     5701 accatccccg ggatcagcgt catccccgac ccgtcgatct ggtgggcgcc tgccggcacc
     5761 ttcgccccgg cgccgacgtc ggcgatcttc ccatcgcgaa tcaccaccgt ctggccccgc
     5821 agagccgcgc cgccccggcc atcgatcacc gtcacaccgg tgatggcgat gaccgagctg
     5881 tcgatcgcca cgtactgctg cttcacccgg tcgctcagca ccggacgctg cgccgccagc
     5941 gaccccgcgg cgaccagcat tgcaccggca gccactccag agaccagccg catttactcc
     6001 tccacgtcga agtgcatcat catggatgat tccaggtgct ccgcgatatg acagtgcagc
     6061 atccagctac cagggttgga catctcggcc agaatgtcga cggccgcccc ggccgggaca
     6121 aggaccgtgt ccttccagac cggattccgg ttccgcaccc cgttcaccga cagcaccagg
     6181 aaccgctggc catgcaggtg aatgggatgt tgcatgccgt gcagggtatt ccgggcgccg
     6241 gcgagccgga tgtgggtcag cgtcccccgg cggaagcgcc agtgaatgtc catgttctcg
     6301 gcgccgctcg cgaggtctcg caggatccag cgggcctgcc ggctggtggt ggcccagttc
     6361 atccccggca tcgtgccttc ccactcgacc gggttgaagt agatcgagtc gagccgcatc
     6421 aactgctcgc tcacgaatgg caggccgttg aaggccaccc ggagctcgag cgaatgctcc
     6481 ggcgcttcat cggcatgggc cgcgaccagc gagtcgagcg tggctgcttc aggcgaggtg
     6541 agcagctgcc cgaaggcgac atagggcggc gcctgccccg cgatcgagat ccggcccagc
     6601 gtgtcggtga ccgcgaagaa cctgccgtaa agatggtcga tggcccggac ccggttcacc
     6661 agcgcggcct ctcccctccc cgggaaatgc acgtcgacca cgtaccgctc cgccggggcg
     6721 atgacgacgc tgctgaccca tgcctcacgg gcatagcgcc cctgatcgga accgaccacc
     6781 ttgatccggc tcccatcccc gaacgagaga ttgaaggtac gggtattcgc gacgttggta
     6841 aggtagaagc ggaccacttc accgccccgc accgacccgc gccagccgct ttctccattc
     6901 accagcatca cgttgccgaa gcggcccatg gccgcgtgag tcgatccgtc cttcccgtac
     6961 ggcaccaatc caccggcacc caccagcaga tcgtcgagga tcaggaactc ttcccgtgcc
     7021 gggccgggag cggtgcccgg tggtgactgg acgaacaggt tgccgtagag ccccaggtcc
     7081 tgctgcgcat cctcccgcac atgcgggtga taccagaaga tcccggcatc gggaaagcgg
     7141 atccggtaga cgaaggtccc gcccggcggc accgcgggct gggtcaggtt cggcactcca
     7201 acaaaggcgt tctccagccg gatcccgtgc cag
//
LOCUS       DATIFF010000135         1150 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_481436, whole genome shotgun sequence.
ACCESSION   DATIFF010000135 DATIFF010000000
VERSION     DATIFF010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_481436"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..509
                     /locus_tag="VLD58_02055"
     CDS             <1..509
                     /locus_tag="VLD58_02055"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSB53102.1"
                     /translation="NTTAASASVRSARAQYLPTLALSGSTSWNGSNANNYQLFANRQL
                     TLGLTWPIFNRFQREQTIETRLANLDNAEANAADTKRGIQASLTSQYAALDAARARID
                     ISRTSIEAAQEDLRVVNARYGAGAATILDVLTSQQALAQAQVDAVNARFDYLKARAQI
                     EALIGRHL"
     gene            506..>1150
                     /locus_tag="VLD58_02060"
     CDS             506..>1150
                     /locus_tag="VLD58_02060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB53103.1"
                     /translation="MSSAITDTAERMAMLPADVPRDAVIVTRNLEREYDMGGEIVRAL
                     RGVDITIRRNEFVAIMGPSGSGKSTLMNLIGCLDTPSKGEYWLNGHRVSELGDDELAR
                     IRNREIGFVFQTFNLLPRADALHNVELPLVYAGVSSKERRERAADALGRVGLKDRMSH
                     RPNELSGGQRQRVAIARALVNRPSLILADEPTGALDTKTSAEVMALLQGLGDTGI"
BASE COUNT          206 a          406 c          386 g          152 t
ORIGIN      
        1 ccaataccac cgcggcctcc gcctcggtcc gctccgcccg ggcgcagtac ttaccgaccc
       61 tggcgctctc cgggagcacc agctggaacg gcagcaacgc caacaactac cagctcttcg
      121 ccaaccggca gctgacgctg gggctgacct ggccgatctt caaccgcttc cagcgggagc
      181 agaccatcga gacccggctg gccaatctgg acaatgcgga agcgaacgcg gccgacacca
      241 agcggggcat ccaggcgtcg ctcaccagcc agtatgccgc ccttgacgcg gcccgggcac
      301 ggatcgacat ctcccggacc agtatcgagg cggcccagga ggacctgcgg gtggtgaacg
      361 cccgctacgg ggccggcgcc gccacgatcc tcgacgtact gacgtcacag caggcgctgg
      421 cgcaggcgca ggtggacgcg gtgaatgccc ggttcgacta cctcaaggcg cgggcccaga
      481 tcgaagcgct gattggaaga cacttatgag ctccgcgatc accgatactg ctgaacggat
      541 ggccatgctt cccgcggacg tgccgcggga cgccgtgatc gtcacccgca atctggaacg
      601 ggaatacgac atgggcggcg agatcgtacg ggcgctccgg ggcgtggaca tcacgatccg
      661 gcgcaacgag ttcgtcgcga tcatgggccc gtccggctcg ggcaagtcga ccctgatgaa
      721 cctgatcggg tgcctcgata cgccgagcaa gggcgagtac tggctcaacg gccaccgggt
      781 ctcggagctg ggggacgacg agctggcccg gatccgcaac cgggagatcg ggttcgtctt
      841 ccagaccttc aacctgctcc cccgggccga cgccctccac aacgtggagc tgccgctggt
      901 gtatgccggc gtgagctcca aggagcgccg cgaacgcgcc gccgacgcgc tgggccgggt
      961 ggggctcaag gaccggatga gccaccgccc caacgagctc tccggcggcc agcggcagcg
     1021 tgtggccatc gcccgggcgc tggtgaaccg gcccagcctc atcctcgccg acgagccgac
     1081 cggcgcgctg gacaccaaga ccagcgccga ggtgatggcg ctgctgcagg gcctgggcga
     1141 caccggcatc
//
LOCUS       DATIFF010000136         1197 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_481448, whole genome shotgun sequence.
ACCESSION   DATIFF010000136 DATIFF010000000
VERSION     DATIFF010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1197
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_481448"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..531)
                     /locus_tag="VLD58_02065"
     CDS             complement(<1..531)
                     /locus_tag="VLD58_02065"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HSB53104.1"
                     /translation="MAPDRLPRRLGVVSAAGVLVGIVIGSGIFRVPSVVAAEVGSTGG
                     AAMLWVLGAVVTLCGALTMAELATAFPRAGGPYVILREAWGPLPAFLFGWIKLVVTGP
                     AGIAAVALIFAAYASAFVPLGEAGQRVLAAALVAGLSLVNIRSVPWSARVQNLSTLAK
                     VLALVLMAALLFAFATP"
     gene            complement(688..>1197)
                     /locus_tag="VLD58_02070"
     CDS             complement(688..>1197)
                     /locus_tag="VLD58_02070"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSB53105.1"
                     /translation="VTAHYVSGHRDRVRTLTLVDPVATSGGLPLLLRLPLIGDWIWQT
                     LHVPEMAEGQLSDFLHPERHPTWVAQYRPQMRYRGFGHALLETLKAESHVSIDSLYSG
                     VARSGVPVLLVWGRQDQTVPFALSDVVRRNIPSADFLPVDSAGHLPHIEQASLVNAKL
                     AAFLAAHGT"
BASE COUNT          207 a          406 c          441 g          143 t
ORIGIN      
        1 gggcgtggcg aaggcaaaga ggagcgccgc catcagcacc agcgcgagga ccttggccag
       61 cgtcgagagg ttctgtaccc tggcgctcca ggggaccgac cggatgttga ccagggagag
      121 gccggcgacg agcgccgcgg cgagcacgcg ctgcccggcc tcgcccaggg gcacgaacgc
      181 gctcgcgtac gcggcgaaaa tgagggcgac cgcggcgatg ccggccggcc ccgtcaccac
      241 cagcttgatc cagccgaaga ggaaggcggg gagggggccc caggcctcgc gcaggatgac
      301 gtagggtccg cccgcgcgcg ggaaggcggt ggcgagctcc gccatcgtga gggcgccgca
      361 gagcgtgacc accgcgccga gcacccagag catcgcggcg ccgccggtcg agccgacttc
      421 ggccgcgacc acgctcggca cccggaagat cccgctcccg atgacgatgc cgaccaggac
      481 cccggcggcg ctgaccacgc cgaggcggcg cggcaggcgg tcgggggcca tgggtggggt
      541 cgatccgggg gccgtcttca gcatgccttc gctcgttccg cgcgggggga tcgacctcgt
      601 accctcaaga aggatgccac ccggtaagtc ggggcgaggg cgcccctggc cggcggggcc
      661 gctgcctcgc cgccacagac ttgatgatca ggtgccatgc gctgcgagga acgcggcgag
      721 cttcgcgttc accagcgacg cctgctcgat gtggggaaga tgtcccgccg agtcgaccgg
      781 aagaaagtcc gccgaaggaa tgttccgccg gaccacgtcc gagagcgcga agggaaccgt
      841 ctggtcctgg cgtccccaga cgaggagcac cggcaccccg ctgcgggcaa caccagagta
      901 gagggaatcg atgctcacgt gactctcggc cttcagcgtc tcgagaaggg cgtggccgaa
      961 tccccggtag cgcatctgcg gccggtattg cgccacccag gtcgggtgtc gctccggatg
     1021 caggaaatcg gagagttgac cctcggccat ttccgggacg tgaagggtct gccagatcca
     1081 gtccccgatc agcggaaggc ggagcagcag cggcaggcca cccgaggtgg ccaccggatc
     1141 caccagcgta agggtgcgca cccggtcgcg atgcccgctc acgtagtgcg ccgtcac
//
LOCUS       DATIFF010000137         1649 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1097702, whole genome shotgun sequence.
ACCESSION   DATIFF010000137 DATIFF010000000
VERSION     DATIFF010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1097702"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1434)
                     /locus_tag="VLD58_02075"
     CDS             complement(<1..1434)
                     /locus_tag="VLD58_02075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53106.1"
                     /translation="MILRRLLVLLGLLAPLSGGLAHLAAQEATRSPHGSLAEPCASCH
                     ASTGWAPARISRSFDHARWGFALAGAHAQTTCRGCHTSLEFSGAPRTCSGCHADVHRG
                     ELGADCSRCHTPRSFLDRSAMVRAHQLTRFPLTGSHISADCESCHRPAAQGSLTFVNR
                     SVECVQCHTDAYRSAKTPDHQAGGFPTDCNQCHSTATWPGARFNHTASGFPLTGAHRA
                     IRCQQCHGDGVYQGKNSACVSCHRTDYDATTNPGHVSARFPTECATCHTTAAWQPASF
                     DHGTTDFPLTGAHRAVDCQQCHGDGVYAGKPTTCVSCHQAAYDGTTEPPHRAAQFPTD
                     CTGCHSTAAWQPATFDHAQTAFPLTGAHTSAGCQQCHGDGVYAGKTTACAGCHQAAYD
                     GTTDPNHRAAGFPVTCADCHTTSTWDGARFDHDATFFPIYSGRHQGQWASCATCHTSP
                     TSFQTFTCLSCHEHSQAETAGHHGGVSG"
     gene            complement(1431..>1649)
                     /locus_tag="VLD58_02080"
     CDS             complement(1431..>1649)
                     /locus_tag="VLD58_02080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53107.1"
                     /translation="DCERCHGVDGFRPASGFDHDRDTPFALKGAHSRVECTACHSTRR
                     TVAGRAIVVYAPLSGKCESCHTGEKRAS"
BASE COUNT          232 a          521 c          646 g          250 t
ORIGIN      
        1 gccgctgacg ccgccgtgat gccccgcggt ctcggcctgg ctgtgctcgt ggcaggacag
       61 gcaggtgaag gtctggaaac tggtcgggct ggtgtggcag gtggcgcacg acgcccactg
      121 gccctggtgc cgtccggaat agatcgggaa gaaggtcgca tcgtggtcga aacgggcgcc
      181 gtcccaggta ctcgtggtat gacagtcggc gcaggtgacc gggaagcccg cggcccggtg
      241 gttgggatcc gtggtcccgt cgtacgccgc ctgatggcac ccggcgcacg cggtcgtctt
      301 gcccgcgtac accccgtcgc cgtggcactg ctggcacccc gcggaggtgt gggctccggt
      361 cagggggaag gccgtctgcg cgtggtcgaa cgtggccggc tgccaggccg cggtggaatg
      421 gcacccggtg cagtcggtcg ggaactgggc cgcccgatgc ggcggctcgg tggtgccgtc
      481 gtaggccgcc tggtggcagc tcacgcaggt cgtgggcttg ccggcgtaga ccccgtcgcc
      541 gtgacactgc tggcagtcga ccgcgcggtg ggcgccggtg agggggaaat cggtggttcc
      601 gtgatcgaag ctggcgggct gccaggccgc cgtcgtgtga caggtcgcgc actcggtcgg
      661 gaagcgcgcc gacacgtggc ccgggttggt ggtcgcatca tagtcggtgc gatggcaaga
      721 cacgcacgcc gagttcttgc cctggtacac cccgtcgcca tggcactgct ggcagcggat
      781 cgcgcgatgc gcgccggtaa gaggaaagcc cgaggccgta tggttgaacc gcgcgccggg
      841 ccaggtggcc gtggaatggc actggttgca gtcggtcggg aagccgcctg cctgatggtc
      901 gggagtcttc gcggagcggt acgcgtcggt gtggcactga acgcattcca ccgagcgatt
      961 cacgaacgtg agacttccct gcgccgccgg ccggtggcag ctctcgcagt cggccgagat
     1021 atggcttccc gtcaggggga accgggtgag ctgatgggcc cgcaccatcg cggagcgatc
     1081 gaggaagctc ctcggagtat ggcagcgaga gcagtcggca ccgagctcac cccggtggac
     1141 gtcggcgtgg cagccggaac aggtgcgtgg ggcgccgcta aactcgagcg aggtgtggca
     1201 tccccggcag gtggtctggg cgtgcgcccc agcgagggcg aagccccacc gggcgtggtc
     1261 gaagctccgg ctgatccggg ccggggccca cccggtcgag gcatggcagc tggcgcacgg
     1321 ttccgccaag ctcccgtgcg ggctccgggt ggcctcctgg gccgcgaggt gggcgaggcc
     1381 tcccgacagc ggcgcgagga gaccgagcag gacgagcagc cggcggagga tcatgaggcc
     1441 cgcttctccc cggtgtggca gctctcgcat ttgcccgaga gcggggcata gaccacgatg
     1501 gcgcggccgg ccacggtccg gcgagtgctg tggcaggcgg tgcactcgac gcggctgtgg
     1561 gcgcctttca gcgcgaatgg cgtgtcccga tcgtgatcga agccgctggc cggccggaac
     1621 ccatccacgc cgtgacagcg ctcgcaatc
//
LOCUS       DATIFF010000138         2415 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1251662, whole genome shotgun sequence.
ACCESSION   DATIFF010000138 DATIFF010000000
VERSION     DATIFF010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2415
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1251662"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..326
                     /locus_tag="VLD58_02085"
     CDS             <1..326
                     /locus_tag="VLD58_02085"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSB53108.1"
                     /translation="NVIEHVAVLAEPDQSIQPNDIPVYDDAVEWPAESAVPAGVMDEA
                     YHPAKDRVVAQFEKEYLTRLISRAGGNMSKAARLASIDRTTLYRLMDKHEFHRDESPG
                     HLSDA"
     gene            316..1488
                     /locus_tag="VLD58_02090"
     CDS             316..1488
                     /locus_tag="VLD58_02090"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSB53109.1"
                     /translation="MTPETAVPGTTSGDRRRAAQVHAGPVRVWDPDGPSTSAIAPPLW
                     DGLRDAVLWTQAEWARVIEHASSADEVTAHLAQLSQAIRAEASGQSGEWVAPPRTPLS
                     RQLLGMVRGAFLERAQALTAPDTAQLLRLLQAIEAVGQGLEADWSQHFADRLSAPDGL
                     ELVVEVAHDLRSPLTSILFLAETLQRGRSGPVNSVQERQLGLIYSAAFGLSSVASDVI
                     ELARGGDRLVDLDPIPFSVTDILESVRDIVQPIAEEKSLTVQLTTPEADFRIGHPVAL
                     SRVLLNLTTNALKFTAEGSVEVTARQNGPRRIEFAVRDTGRGIPPQSMATLFEPFRRR
                     QKAGEYAFSGSGLGLSICRKLVEAMGSTLQVETVMGTGTRFFFELDLPLAGEGQFG"
     gene            1761..>2415
                     /locus_tag="VLD58_02095"
     CDS             1761..>2415
                     /locus_tag="VLD58_02095"
                     /inference="COORDINATES: protein motif:HMM:NF014045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HSB53110.1"
                     /translation="MNRPLIRPGRHLSQAPVHAPNAALLIDFDNVTLGIQKDLTKELR
                     TLLNSDIIKGKVAVQRAYADWRRYPQYIVPLSESSIDLIFAPAFGSSKKNATDIRLAI
                     DAIELVFTRPEIGTFILLSGDSDFSTMVIKLKEYGKYVIGVGIRESASDLLIQNCDEY
                     YSYNDLAGLTKEVDTPSIQRDPWELAGEAVAQMARNGDVMRSDRLKQVMQQIDSNFDE
                     "
BASE COUNT          410 a          847 c          799 g          359 t
ORIGIN      
        1 agaatgtcat cgagcacgtc gcggtgctgg ccgagccgga tcaatccatc cagccgaacg
       61 acatcccggt gtacgatgat gcggtcgagt ggccggccga gagtgcggtg ccggcagggg
      121 tgatggacga agcataccat ccggccaaag accgggtggt ggcccagttc gagaaggagt
      181 acctgacccg tctgatcagc cgcgccggcg ggaacatgtc gaaggccgcg cgcctggcca
      241 gcatcgaccg gaccacactt taccggctga tggacaagca cgaattccac cgagacgaat
      301 cgccgggtca cctgagtgac gcctgaaacc gcggttcccg gcaccaccag cggtgaccgc
      361 cggcgggcgg cccaggtgca cgccgggccg gtgcgggtgt gggaccccga cgggccctcc
      421 acctccgcca tcgccccgcc gctgtgggac ggcctgcgtg atgccgtgct ctggacccag
      481 gcggaatggg cgcgggtgat cgagcacgcc tccagcgccg acgaagtcac cgcccacctg
      541 gcacagctgt cccaggccat ccgcgccgag gccagtgggc agagcgggga atgggtggcc
      601 ccgccgagga cgcccctgtc gcgccagctc ctggggatgg ttcggggcgc gttcctggag
      661 cgggcccagg ccctcacggc tccggacacc gcccagctcc tccgcctcct ccaggcgatc
      721 gaggcggttg gccaggggct ggaagccgac tggtcgcagc acttcgccga ccggctatcg
      781 gcccccgacg ggctggagct ggtggtcgag gtcgcgcacg acctccgctc accgctcacc
      841 tcgatcctct tcctggccga gacgctgcag cgcgggcgca gcggcccggt caactcggtg
      901 caggagcgcc agctgggatt gatctacagc gccgccttcg gcctgagctc ggtggcgagc
      961 gacgtgatcg agctggcccg gggcggcgac cggctggtcg acctggaccc gatcccgttc
     1021 tcggtcaccg acatcctcga atcggtgcgg gacatcgtcc agccgatcgc ggaagagaag
     1081 agtctcaccg tccagctgac cacgcccgaa gccgatttcc ggatcggcca tccggtggcg
     1141 ctgagccggg tgctgctcaa cctcaccacc aacgccctca agttcactgc cgagggttcg
     1201 gtcgaggtga cggcgcggca gaacggtccc cgccggatcg agttcgcggt gcgggacacc
     1261 gggcggggga tcccgcccca gtcgatggcg acactgttcg agccgttccg ccggcggcag
     1321 aaggccggtg agtacgcctt ttcggggtcg ggtctgggat tgtcgatctg ccgcaagctg
     1381 gtagaggcga tgggctcgac cctgcaggtg gagaccgtaa tggggaccgg tacccgcttc
     1441 ttcttcgagt tggacctgcc gctggccggg gaagggcaat tcggctgagc cgccctccga
     1501 tccaccccta ccaccgcccg acccactcac ctaaattgtt ctggctggcc atcctgtaga
     1561 gtctgcccac gatggcgcgc atcggcgacc cggccgaccg ccgccgtccc gtgccggtgc
     1621 ggctcccctg cgatggcgac agcgacaacc cctgacgggt ctccgccctc gagccccgct
     1681 cgctcgccct gccgctgtcc gggtccggcc aagtgcgacg agcggtccgc ggaggacgcg
     1741 agacccggaa cgagagcgac gtgaaccgac cgctgatccg gcccgggcgg cacttgagcc
     1801 aggcccccgt gcacgccccc aatgccgcgc tgctgatcga cttcgacaat gtcaccctgg
     1861 gcatccagaa ggacctgacc aaggagctca ggaccctcct caacagcgac atcatcaagg
     1921 gcaaagtcgc cgtccagcgt gcgtacgccg actggcgccg atatccgcag tacatcgtgc
     1981 cgctctcgga atcctcgatc gacctgatct tcgcgcctgc gttcgggtcg agcaagaaaa
     2041 acgcaaccga catccgcctc gccatcgacg ccatcgagct ggtctttacc cgccccgaga
     2101 tcgggacctt catcctgctc tcgggcgaca gcgacttctc gacgatggtc atcaagctca
     2161 aggagtacgg gaagtacgtc atcggggtcg gcatccggga gagcgcgagc gacctgctga
     2221 tccagaactg cgacgagtac tactcctaca acgacctcgc gggcctcacc aaggaggtcg
     2281 acactccctc gatccagcgc gacccgtggg agctggccgg cgaggccgtg gcgcagatgg
     2341 cgcggaacgg cgacgtcatg cgctccgacc ggctgaagca ggtgatgcag cagatcgact
     2401 cgaacttcga cgagc
//
LOCUS       DATIFF010000139         2408 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1559048, whole genome shotgun sequence.
ACCESSION   DATIFF010000139 DATIFF010000000
VERSION     DATIFF010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2408
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1559048"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1330
                     /locus_tag="VLD58_02100"
     CDS             <1..1330
                     /locus_tag="VLD58_02100"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSB53111.1"
                     /translation="EEELVGEGDLDATILRQLPVSGRADIASQLAEGPRGSSLLKIAG
                     DSPEDRQAHKLNLLLDIVKELSQQTEVDRLLDRIVGLTFQVMSVDRVAVMTFEKGDLV
                     PRVWRSRVEAPAGSWVVPRAIARKAIEDRVAVLSENILTEDATAAGIESALCAPLLGS
                     QGTVLGIIYLDSLGPGHTFSEEDLEFLTAFAGMAAVAMENGQLIERMWREAVVLSNFQ
                     RYFAPDLARQIAGQEGEIQLGGAKRQVVVLFSDIRGFTQLSERMSPDEIAGLLTDYFT
                     EMVEIVFRYGGTLDKFMGDALMALWGAPIARIDDADRATRAAIAMQQALRQLNVRWQQ
                     QGRPALAVGIGLNAGEVFAGNIGSERRLEYTVIGDAVNIAARLCSQAGPGEILIAEPL
                     HAILSQPPPVSSLTPVPLRGKSRPVPVYRIEWQDVVIETEITGSRPVATS"
     gene            1450..2394
                     /locus_tag="VLD58_02105"
     CDS             1450..2394
                     /locus_tag="VLD58_02105"
                     /inference="COORDINATES: protein motif:HMM:NF012402.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53112.1"
                     /translation="MAEPEIAATPVPDNRINAVPRAEAPVKAPRQKIREMELVITDVI
                     WETPDTVTLNLFANGERMDYQAGQFITIRPQQFPALQSRCSYFEDMKGKKEPGRAYSL
                     TSAPHEKQLAITVKAETYVKGQTKYPPLLSPFLTYSVRPGMSFKATGIGGPYVLPPDV
                     DTRSDHIVHVCAGSGIVPNYALLKYCLETGMSQRHTLIYGNKTWDDIIFRHQINELAE
                     RFPDKFRLIHSISREKRTAPGLDIRHGRVGEELLREVIQDPTSCEVFSCGPGLSNYEK
                     QAAREKGEEPQPRFLETVLAGLKNIGVPPEREHHESYG"
BASE COUNT          419 a          824 c          831 g          334 t
ORIGIN      
        1 cgaggaggag ctcgtcggcg agggggatct agatgccacc atcctgcggc aattgccggt
       61 gagcggccgg gcggacatcg cctcccaact cgccgagggg ccccggggct cctccctgct
      121 caagatcgcc ggcgattctc ccgaggaccg ccaggcgcac aagctcaacc tgctgctcga
      181 catcgtcaag gagctgtcgc agcagaccga ggtggaccgg ctgctcgacc gcatcgtggg
      241 cctcaccttc caggtgatga gcgtcgaccg ggtggccgtg atgacgttcg agaaggggga
      301 tctggtcccc cgggtctggc gcagccgcgt ggaggcgccg gccggaagct gggtggtgcc
      361 gcgggcgatc gcccgcaagg ccatcgagga ccgggtggcg gtgctctcgg agaacatcct
      421 gaccgaggac gccacggccg ccggcatcga gagcgccctc tgcgcgccgc tgctggggag
      481 ccaggggacg gtgctcggca tcatctatct ggacagcctg gggcccggcc acacgttcag
      541 cgaggaggac ctcgagttcc tcaccgcctt cgccggcatg gcggcggtgg cgatggagaa
      601 cggccagctc atcgagcgca tgtggcgcga ggccgtggtg ctgtcgaact tccagcgcta
      661 cttcgcaccc gacctcgccc gccagatcgc cggccaggag ggggagatcc agctcggcgg
      721 cgccaagcgg caggtggtcg tcctcttctc ggacatccgc ggcttcaccc agctctccga
      781 gcgcatgagc ccggacgaga tcgcggggct gctcaccgac tacttcaccg agatggtgga
      841 gatcgtcttc cgctacggcg gcacgctcga caagttcatg ggcgacgcgc tgatggcgct
      901 ctggggagcg ccgatcgccc gcatcgacga cgccgaccgc gccacccggg cggccatcgc
      961 catgcagcag gcgctccggc agctcaacgt ccgctggcag caacaggggc ggccggcgct
     1021 ggcggtgggc atcggcctca acgccggcga ggtcttcgcc ggcaacatcg gcagcgagcg
     1081 gcggctggag tacacggtca tcggcgacgc ggtgaacatc gccgcgcgcc tctgctccca
     1141 ggccgggccg ggcgagatcc tgatcgccga gcccctgcac gccatcttga gccagccgcc
     1201 gccggtctcc tcgctcaccc cggtgccgct gcgggggaag tcgcggccgg tgccggtcta
     1261 tcggatcgaa tggcaggacg tggtgatcga gaccgagatc accggcagcc gccccgtggc
     1321 cacctcctag gaccaccctc tcgggtgggt ggcgcgcggc gggatgcggg tacaatcgga
     1381 ccccgaagac aagaccgcag cgagccgccc cagggagaac gccctgagca gcccctgaga
     1441 ggagaaagta tggccgagcc cgaaatcgca gccacccccg ttccggacaa ccggatcaac
     1501 gccgtcccgc gcgccgaggc ccccgtgaag gcgccgcgcc agaagatccg ggagatggag
     1561 ctggtgatca ccgacgtcat ctgggagacg ccggataccg tgacccttaa cctcttcgcc
     1621 aacggcgaga ggatggacta tcaggccggg cagttcatca ccatccggcc gcagcagttc
     1681 ccggcgctgc agagccgctg cagctatttc gaggacatga aggggaagaa ggagccgggg
     1741 cgggcctatt cgctgacctc ggcgccgcac gaaaagcagc tcgcgatcac ggtcaaggcc
     1801 gagacctacg tcaaggggca gaccaaatat cccccgctcc tctcgccgtt cctcacctac
     1861 agcgtgcggc cggggatgag cttcaaggcg accggcatcg gcggcccgta cgtgctgccg
     1921 ccggacgtcg acacgcgctc ggaccacatc gtccacgtct gcgccggctc ggggatcgtg
     1981 ccgaactacg ccctgctcaa gtactgcctg gagacgggga tgagccagcg gcacaccctg
     2041 atctacggca acaagacctg ggacgacatc atcttccgcc accagatcaa cgagctggcg
     2101 gagcgcttcc cggacaagtt ccgcctcatc cactcgatct cgcgcgagaa gcggaccgcg
     2161 ccgggcctgg acatccgtca cggccgggtg ggcgaggagc tgctgcgcga ggtgatccag
     2221 gacccgacct cctgcgaggt cttcagttgt ggtcccggcc tctcgaacta cgaaaagcag
     2281 gccgcgcgcg aaaagggcga ggagccccag ccgcgcttcc tggagacggt gctcgccggg
     2341 ttgaagaaca tcggggtgcc gccggagcgg gagcatcacg agagttacgg gtagggcggg
     2401 ctaatcga
//
LOCUS       DATIFF010000140         1217 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1712979, whole genome shotgun sequence.
ACCESSION   DATIFF010000140 DATIFF010000000
VERSION     DATIFF010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1217
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1712979"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(188..1129)
                     /locus_tag="VLD58_02110"
     CDS             complement(188..1129)
                     /locus_tag="VLD58_02110"
                     /inference="COORDINATES: protein motif:HMM:NF033563.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
                     /protein_id="HSB53113.1"
                     /translation="MPYHQITRGERYRIKDLLLLGWHPARIAQELGRARSTITRELAR
                     NRTKRGPYEPWPAHCYARSRRRLSRRHHRVAPWLWRAVCLRLHQWWSPEQIAGRFRLT
                     GEGWISYQTIYRRIQEDEREGGALHACLRQHAWARQRRRSPRTRRPLGRPLQERPAHI
                     AARRQQGHWEVDSLLGAGPGAPRLLSAVERATGFVALGKLERPTARAFAARAIQLFRR
                     QPQPVRTVTADNGPELTAWETIEAATGSRFYFARPYCAWERGTNENTNGLLRQYLPKR
                     ASMAHLTQQDCNRIARQLNQRPRKRLGFRTPEECYKG"
BASE COUNT          173 a          412 c          418 g          214 t
ORIGIN      
        1 tcacttgggc acgacggaag ccggcagcct tagcctgcgc ggagaggtcc acgggaccac
       61 gatcaccggc acctgggacc tactgacctg cgacgtctgt gatcagtcgg gcgcatccgg
      121 ccggttcgtg gcgatcctca agcgaggtcc gtaggctgtg tgtgacttca agggtgaagt
      181 gcaacactca gcctttgtag cactcttccg gggtgcggaa gccgagtcgc ttccggggtc
      241 gttggttcag ctggcgggcg atgcgattgc agtcctgttg ggtcagatgg gccatcgagg
      301 ctcgcttcgg cagatactgc cgtaggagcc cgttagtgtt ctcgttggtt ccccgctccc
      361 aggcgcagta cggccgcgcg aagtagaagc gactcccagt ggcggcctcg atcgtctccc
      421 acgcggtcag ctcgggccca ttgtccgcgg tgacggtccg caccggttgc ggctggcgcc
      481 gaaacagctg gatcgctcgc gccgcgaagg cgcgggccgt cgggcgctcg agcttgccca
      541 aggccacgaa gccggtcgcc cgctcgaccg cgctcagcaa tcggggcgcg cccggcccgg
      601 ccccgagcag ggaatcgacc tcccagtgcc cttgctggcg ccgcgccgcg atgtgggccg
      661 gtcgctcctg aagcgggcgc ccgagcggcc gccgggtgcg ggggctccgg cgccgctgcc
      721 gcgcccaggc gtgctgccgc agacaggcat gcagcgcccc accctctcgt tcatcctcct
      781 ggatccggcg atagatggtc tggtagctga tccagccctc gccggtgagg cggaaccgac
      841 cggcgatctg ctccgggctc caccattggt gcaggcggag gcacaccgcc cgccacagcc
      901 agggcgcgac ccgatggtgg cgccgcgaga gccgtcgacg gctccgcgca tagcagtgcg
      961 ccggccacgg ctcgtacggc ccgcgtttgg tccgattccg ggcgagctcc cgggtgatgg
     1021 tgctccgggc ccggcccagc tcctgggcga tccgggctgg gtgccagccc agcagcagca
     1081 gatccttaat ccgatatctt tccccgcggg tgatctggtg gtatggcata agctttggtt
     1141 ctcttggtag gagatcccga agtctatacc aggctgccag atcgcccatt ttgttgcact
     1201 taatctggca atgcgcc
//
LOCUS       DATIFF010000141         2246 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_636068, whole genome shotgun sequence.
ACCESSION   DATIFF010000141 DATIFF010000000
VERSION     DATIFF010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_636068"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1362)
                     /locus_tag="VLD58_02115"
     CDS             complement(<1..1362)
                     /locus_tag="VLD58_02115"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSB53114.1"
                     /translation="MSTFRRIQSTVACVALCGVIAGCREQPTAPGLPSESLRPMAARE
                     GPLVLGGTILTPGGVLKHGYVAVVRGRIASVSVKAPELDDALLIDTDGIILPGFVDVH
                     NHVPWNVLPRWRPGRTFANRDEWREDPGYVQKARDPFERLSAAHFCDMNAWGELRALV
                     GGTTSIMATQPDACIHGLVRNLDLNSGFYGTSELDREHIINVLGVPPATDLPGREQFV
                     AAAGFFIANPLYEALVIHVAEGIDALSEEEFTFLQSGSLLNPKGVVIHGISLTPSDFA
                     AMAAAGTALVWSPRSNLELYGTTTDVAAALNAGVEVALAPDWAITGSGNMLDELKVAD
                     GWSRQHLGGRLSARQLVAMVTSVPAHVAGAEDEVGAITPGLRADLLIIDGEGNDPYRD
                     VVNAAAERIQLVLIDGVPLYGSRSPMQRLWQGSELEAVTVGSSSKLVAPAAGVRVAEL
                     AGRL"
     gene            1642..>2246
                     /locus_tag="VLD58_02120"
     CDS             1642..>2246
                     /locus_tag="VLD58_02120"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HSB53115.1"
                     /translation="MTVIRPKPGLTFDDVLLVPRYSAVHPREVSTSSRFTRTIPLNIP
                     LVSAAMDTVTEADMAIAMARAGGIGVLHKNMSVERQAAEVDRVKRSESGMILNPITLG
                     PDRPLREAYQLMRRFKISGVPIVDGQGRLIGIITNRDLQFERNLDQPIREAMTRENLV
                     TAPVGTSLDDAERILARHRIEKLPVVDAQGVLKGLITIKDI"
BASE COUNT          361 a          776 c          778 g          331 t
ORIGIN      
        1 caggcggccc gccagctccg cgacccggac ccccgccgcc ggcgccacca gcttggagct
       61 gctgcccacg gtgaccgcct ccagttcgct cccctgccag agccgctgca tcggggaccg
      121 gctgccgtag aggggcacgc cgtcgatcag caccagctgg atgcgctcgg ccgcggcgtt
      181 caccacatcg cggtacggat cgttcccctc gccgtcgatg atcagcaggt ccgcgcggag
      241 gccgggggtg atggccccga cctcgtcctc cgcgcccgcg acgtgggcgg gcaccgaggt
      301 gaccatggcg acgagctggc gggccgagag cctgcccccc agatgctgcc ggctccagcc
      361 gtccgcgacc ttgagctcgt ccagcatgtt gccgctcccg gtgatcgccc agtccggggc
      421 gagcgcgacc tcgaccccgg cgttcaaggc ggcggcgacg tccgtggtgg tcccgtacag
      481 ctcgaggttg ctgcggggag accagaccag cgcggtgccg gccgcggcca tcgcggcgaa
      541 gtcgctcggg gtgagcgaga tgccatgtat gacgacaccc ttcggattca gcagtgaccc
      601 cgattggagg aaggtgaatt cctcttccga gagcgcgtcg atcccctcgg ccacatggat
      661 caccagcgcc tcgtacagcg ggttggcgat gaagaagccc gccgccgcga cgaactgctc
      721 ccggccgggg agatcggtgg cgggaggcac gcccagcacg ttgatgatgt gttcgcgatc
      781 gagctcgctg gtgccataga agccgctgtt caggtcgaga ttgcggacca gcccgtgaat
      841 gcacgcgtcg ggctgcgtcg ccatgatgga ggtggttccg ccgaccaggg cgcggagctc
      901 accccaggca ttcatgtcgc agaagtgtgc ggccgaaagc cgctcgaatg gatcgcgcgc
      961 cttctggaca tagccgggat cctcccgcca ttcatcgcgg ttcgcgaagg tccgcccggg
     1021 ccgccagcgg ggcaggacat tccacggaac gtgattatgg acatcgacga aaccgggaag
     1081 gatgatgccg tcggtgtcga tcaggagggc atcgtccagc tcaggggcct tcaccgatac
     1141 cgaggcgatg cggccgcgga cgacagccac gtagccgtgc ttgaggacgc cgccgggggt
     1201 gaggatggtc ccgcccagga cgagggggcc ctcgcgcgcg gccattgggc gaagcgattc
     1261 cgaggggagc ccgggggcgg tgggctgctc cctgcacccg gcgatcacgc cgcagagtgc
     1321 gacgcaggcc acggtcgatt ggatccgccg aaacgtcgac atacatcctc cccaagacga
     1381 atccgacctg agtgccggcg cctcgacggc ggccgggtgg tgtcggttgc ggtactgctt
     1441 gggactgacg cggaggggta cgcggaaagc ggacagggcg cccctccagc gggcccgagc
     1501 gatggcttga tttccgccga accccgccct agacttggag atggaaacgc ctgcccccgg
     1561 cctgccgctc gcccctcccg ggctccggtg ggccgtcgtg catccggggc gcggctcatc
     1621 cgccatttcg cccccgagcg catgaccgtc attcgcccca agcccggcct taccttcgac
     1681 gacgttctcc tcgtgccgcg gtattccgcc gtgcacccgc gcgaggtctc gacctccagc
     1741 cgcttcaccc gcaccatccc cctcaacatc ccgctggttt ccgccgccat ggacacggtc
     1801 accgaggccg acatggccat cgcgatggcc cgcgccggcg gcatcggggt cctccacaag
     1861 aacatgtcgg tggagcggca ggctgccgag gtggaccggg tgaagcggag cgagagtggg
     1921 atgatcctga atccgatcac gctgggaccg gaccggccgc tgcgggaggc ctaccagctg
     1981 atgcgccgct tcaagatctc cggcgtgccg atcgtggacg gacaggggcg gctgatcggg
     2041 atcatcacca accgcgacct gcagttcgag cggaacctcg accagccgat ccgggaggcg
     2101 atgacccggg agaacctggt gaccgctccc gtggggacca gcctcgacga cgccgagcgg
     2161 atcctggccc ggcaccggat cgaaaagctg ccggtggtgg acgcccaggg ggtgctgaag
     2221 gggctcatca ccatcaagga catctt
//
LOCUS       DATIFF010000142         2177 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2021533, whole genome shotgun sequence.
ACCESSION   DATIFF010000142 DATIFF010000000
VERSION     DATIFF010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2177
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2021533"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            43..1146
                     /locus_tag="VLD58_02125"
     CDS             43..1146
                     /locus_tag="VLD58_02125"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSB53116.1"
                     /translation="MRAVIVSHTYIDPATRGKLRALAGLGCTLSVAIPDRWSPTPRGP
                     LLEASWGNDGGVRMVPIPVKGDRGEGVSWKVSDLARMLSDFRPDVVHIEAEPWTPAAA
                     AASARAQKLNIPVILFAWESVVRSETLRERWRRKRTLDRAKGLIGGNQLAAALLARGR
                     SKVPVTVVPQLGLTPPLEIQRPSNAELTIGFVGRLVPEKGLDTLFRACVKLLGRWTLT
                     VVGSGPAQEQLEALAERLGIASRITWKGPMPAEHLRELWPQVDCLVVPSRTTPHWVET
                     FHPAMVEAMGHGVTVVASDSGALPELVDTAGLVVPEDDVPALTAALQHLADAPRERAR
                     LGKEARLRVMAEYVDNAVARRTLEFWEKVVGKK"
     gene            1339..>2177
                     /locus_tag="VLD58_02130"
     CDS             1339..>2177
                     /locus_tag="VLD58_02130"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015774 - polysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HSB53117.1"
                     /translation="MIANNLRRYAARLGWLLGILALATLNPLAAQVPTQAPPGLPLPG
                     GQVPSPAVAEQLLKSRPDLVQQLRQRIGASGLTREQIRARLRAAGYPENFLDPYLAGA
                     DSTQIGQAKPGSDIVDAVRTLGIVGNDEVDSLLVLTDSAQRIADSLRADSLSDTAAVL
                     RVFGTSVFRRSSSLFNPALAGPVDPNYKLGPGDALVLILTGDVEAAHDLVVTREGFIA
                     IPQVGQLNVANLTLAQLEDLLYARLSRVYSGVRRGSGATTHFTVTVSKLRTVQIFVAG
                     DVAR"
BASE COUNT          319 a          838 c          687 g          333 t
ORIGIN      
        1 ccttgaccct cgaccctcga ccctcgaccc ttcagtcccg aaatgcgcgc cgtcatcgta
       61 tcccatacgt acatcgaccc cgccacccgg gggaaactcc gcgccctcgc cgggctcggc
      121 tgcaccctga gcgtggccat ccccgaccgc tggtcgccca caccccgtgg tccgctcctc
      181 gaggccagct ggggcaacga cggcggggtc cgcatggtgc cgatcccggt caagggtgac
      241 cggggcgaag gggtctcctg gaaggtcagc gatctcgccc ggatgctcag tgatttccgg
      301 cccgatgtgg tccacatcga ggccgagccc tggacccccg ccgcggccgc cgcgagcgcc
      361 cgggcccaga agctcaacat cccggtgatc ctcttcgcgt gggagagcgt ggtccgctcc
      421 gagaccctgc gggagcgctg gcgacgcaag cggaccctcg atcgcgccaa agggctcatc
      481 ggcggcaacc agctcgccgc cgccctcctc gcccgcggcc gctccaaggt tccggtcacc
      541 gtcgttcccc agcttggcct caccccgccg ctcgagatcc agcgcccctc caacgccgag
      601 ctcaccatcg gcttcgtggg ccggctggtg ccggagaagg gactcgatac cctcttccgc
      661 gcctgcgtga agctgctggg acgctggacc ctcaccgtgg ttggcagcgg accggcgcag
      721 gaacagctcg aggcgctggc cgagcggctg gggatcgcgt cgcgcatcac ctggaaggga
      781 ccgatgccgg cggaacacct gcgcgagctc tggccccagg tcgactgcct ggtcgtgccc
      841 tcccgcacca cgccgcattg ggtcgagacc tttcaccccg cgatggtcga ggcgatgggt
      901 cacggcgtca ccgtggtggc cagcgattcg ggagcgctgc ccgagctggt cgacaccgcg
      961 ggactggtgg tgccggagga cgatgtcccc gcgctcacgg ccgcgctcca gcacctggcc
     1021 gacgcccccc gggaacgggc ccgactcggc aaggaagcgc gcctccgggt catggccgag
     1081 tatgtcgaca atgcggtggc gcggaggacg ctggagttct gggagaaggt ggtcgggaag
     1141 aagtgaggcg gtcggccttt ggcctttggc cgttaggagt cgctgacggc ccagaggcct
     1201 ttccacctcg aacgccgcat cgcgacccca gccaagctaa cggctaatgg ctaacggcta
     1261 acggccctcc taacggctaa tgccctcgca gcggcctcag cttgaccctc ccccgggccg
     1321 ggcccatctt ctagcgcaat gatcgccaac aacttgcgcc gctatgccgc ccggctgggc
     1381 tggcttctcg gtatcctggc tctcgccacg ctgaaccccc tcgccgccca ggtcccaacc
     1441 caggcaccgc ccggcctccc actcccggga ggacaggtcc cgagccccgc cgttgccgag
     1501 cagttgctca agtcgcgccc ggacctcgtg cagcagctgc gccagcggat cggcgcctcc
     1561 ggactcaccc gcgagcagat ccgggcccgg ctccgcgccg cgggctatcc ggagaacttc
     1621 ctcgatccct atctggccgg cgcggacagc acccagatcg gacaggccaa gcccggctcc
     1681 gatatcgtcg acgcggtccg cactctcggc atcgtaggca acgacgaggt cgactcgctg
     1741 ctggtcctga ccgattcggc ccagcgaatc gccgattccc tccgggccga ctcgctctcc
     1801 gataccgccg ccgtgctgcg ggtgttcggc acctcggtgt tccggcgcag cagctcgctc
     1861 ttcaatccgg ccctcgccgg cccggtcgac cccaactaca agctcggccc cggcgatgcc
     1921 ctggtcctga tcctcaccgg cgacgtcgaa gcggcccacg acctggtggt gacccgtgag
     1981 ggcttcatcg ccatcccgca ggtgggccag ctcaacgtcg ccaacctcac cctggcccag
     2041 ctcgaggacc tgctctacgc ccgattgtcg cgggtctatt cgggagtccg ccgcggcagc
     2101 ggcgccacca cccacttcac cgtgacggtc tccaagctcc gcacggtgca gatcttcgtc
     2161 gccggcgacg tggcccg
//
LOCUS       DATIFF010000143        17023 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1405919, whole genome shotgun sequence.
ACCESSION   DATIFF010000143 DATIFF010000000
VERSION     DATIFF010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 17023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17023
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1405919"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            109..1383
                     /locus_tag="VLD58_02135"
     CDS             109..1383
                     /locus_tag="VLD58_02135"
                     /inference="COORDINATES: protein motif:HMM:NF039904.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HSB53118.1"
                     /translation="MGDFEVIRDPLWDNIRLDGPASLLLDTAPMQRLRYVRQLGHAFL
                     VYPGATHTRFEHALGAYHLTRRALAALEERGELKQVPEHDCLAAKLAALLHDIGHYPF
                     SHALEEAGFPHHEGLGVARLAREPLAGEIARVGVPGLGEQIGQFITGRSTSPLKGLIS
                     GSLDLDKIDYLSRDARMCGVPYGAVDVDRLLASLTLIEVAPGKLELGVHEKGISALES
                     LLFAKYQMYRNVYWHHAVRSATCMFKRAVLAAVASGHLSAAEVADATDDVLTERLFAA
                     DPTGLARAVHGRRLFKRALDLPASDVPAEPEPWTRSRPNLLERVEDRLAEECGLKKGE
                     LLFDFPSNPSMLAVDLPLRTRTGSFERLTGQGRAGQFGLPRVAEELYESARRLRVFTA
                     RPVTRDLTSARELVGLTAAELEARLGEGRNLL"
     gene            1452..2468
                     /locus_tag="VLD58_02140"
     CDS             1452..2468
                     /locus_tag="VLD58_02140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53119.1"
                     /translation="MVTECFFCSSVLPPNEDIEHCSHGQRLAFDERQGRLWVVCRACG
                     RWNLTPAEDRWEAIEECERRFRECRVRLCTDEIGMARLPSGLDLVRIGSPVLPEFAAW
                     RYGDQLLRRRILGAPRRMVRALAWPGAMAAGTLIAASVGTAGALAWAGAAALLFHHRR
                     RRPAVSVPLARGGTLALASEQIQHAELIRAEDESEQWAMWVGCEPDDAPPDARVEYTA
                     AGEPRALLTGGDGRAAAALILPTLNPLGGDPRMVQAAVGWIQAVGGPSQALHKFARSR
                     LVRSPLDNIERTLVSLHPEARLALEMSLHEEEEQRALRGELTILRWAWKQEETLASIA
                     DNMW"
     gene            complement(2575..3813)
                     /locus_tag="VLD58_02145"
     CDS             complement(2575..3813)
                     /locus_tag="VLD58_02145"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB53120.1"
                     /translation="MNLANIASIGIGFETLRANPLRTVLSTLGVIIGVASLVAILSLG
                     DGMERLGREEIERTTDVQTVALQPQLTEEIDGQTVPRSDYPVFTQADADELRRMADIA
                     GVSMTLQGSAVAEGQAGNRRPVTIVATLADNASFQRLEFADGRYFTEVEADRNAPVAV
                     VSNRLAKELAANGEPSDLLGASIRLNGEPRRVIGILSSFRGERARLAYVPLRSAKSLL
                     PPSGRPRAPAIYLKARSLEQVPALQAAGEDWLARRYGRWEGRVKVETSAQRLEQVRRG
                     MNTFKLFLGAITGISLVVGGIGIMNVLLASVTERTREIGVRKALGARPRDVLLQFLSE
                     SVAISGLGSGIGVLLGVTAAFGITAVVRAQTEAQLYAAFSGQSLLVVVAAALFVGVAF
                     GIYPALRASRLSPIDAIRHE"
     gene            complement(3936..4715)
                     /locus_tag="VLD58_02150"
     CDS             complement(3936..4715)
                     /locus_tag="VLD58_02150"
                     /inference="COORDINATES: protein motif:HMM:NF033484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Stp1/IreP family PP2C-type Ser/Thr phosphatase"
                     /protein_id="HSB53121.1"
                     /translation="MRFSCAARTDTGIVRSGNEDNYLMLADRGVFVVADGMGGHAAGE
                     VASEMAVRIISRELGTLRGLTDDQAGERMRHSIIEANSAIFDRTLTEHDKRGMGTTTT
                     VLILMPHRYLIGQVGDSRAYLLRDGRFLQVTKDHSYVQEQVDLGLLTPEQARVHPYSN
                     VITRCIGANAEVVPDIYFGHLHPGDILLLASDGLTGMLEDEQLSQILSGEGGPQQWVD
                     KLINEANRRGGLDNITAIIIRIEPDVPAEVTNPLGTPAQKR"
     gene            complement(4725..6260)
                     /locus_tag="VLD58_02155"
     CDS             complement(4725..6260)
                     /locus_tag="VLD58_02155"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSB53122.1"
                     /translation="MMELEVAGQRTPIPVGELVIGTDPSCGLRLGGLSAAHAVVIGIG
                     DGSVAVRRVGENDVFLNGVKLGAEPAPVLHGDKIQVGAHELFVHDPRRSGSTQFVSAG
                     DVARMVAATAKPGAAPKPPTAATGGRLVCLTDGREYTIGSAPLVIGREAGCDIVVPNK
                     DVSRRHAEIFASPQGYVLVDSSTNGTFVNAERVEAQRLLARADVIRIGDHEFRFYADR
                     MPDVPSLVNAPPLAPAPAAPAPPPAPVFTPPPAMPPAAAGAAERLSHTMHGMPPAQPP
                     APPPAPAPEPPRAAPAPRAPNTTPALATFLVRSGQLKGQRLTVRVPVVNIGRAEYNDL
                     VLPDDSVSGAHAKLQRREGIWVLIDNDSTNGTWVDGERVTGETMLGPGAVVRFGEVSA
                     MFEPTDDHMGTAAGSGTKVMGAMKPSSPAPQPAPVPQIPVSSVPGLPPLHEPSFSGGP
                     TPSAARPAMEAPGFHPDPGVARSARRPMVITSPEKQGMPKWIIPLILVLVLGAVAAFL
                     LTR"
     gene            complement(6331..8139)
                     /locus_tag="VLD58_02160"
     CDS             complement(6331..8139)
                     /locus_tag="VLD58_02160"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB53123.1"
                     /translation="MNDPNAEAEERGYDAALMRRLLRYVTPYRGIALLALLLLLTTAG
                     LTLVGPALTQRALDVAVPSRDFDLLRTLALLFLGSLVLEFLCDYGQAYLTSWMGQRVM
                     ADLRLTVFSHLQRLSVSYFDRNPVGRLMTRVTSDVETLNELFSSGVVTVFGDLFTLVA
                     IVVNMLIVDWRLALVAFAVIPLMILAAVTFRRHVRDSFSEIRVRVARLNAFLQEHLTG
                     VRVVQLFGREAAEAKAFGKVNDDHLRAHLRSITIYAVFFPVVEFLTSVALALLLWRGG
                     ARVLDGTLTVGVLAAFIQLTRRFFQPLQDLSEKYNLLQSAMASSERIFRLLDTEPSVR
                     PPVHPAKLASPVRGEVVFEDVWFRYSAPSDPSEPGWVLKGVSFRARPGETIALVGHTG
                     AGKTTIINLLLRFYDPERGRVTVDGVDIRELDPGDLRGLIGFVQQELFLFTGDINHNL
                     ILDAAITPALARQAAERVGADRFIQRLPSGYGHILGERGRSLSVGERQLLSFARALAR
                     DPRILVLDEATSSVDAEAEAQIQSAVGELMRGRTSLVVAHRLSTILNADEILVLHHGE
                     IRERGTHRALLAQGGLYERLHRLQLGEQEKPQSLSA"
     gene            complement(8136..9230)
                     /locus_tag="VLD58_02165"
     CDS             complement(8136..9230)
                     /locus_tag="VLD58_02165"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HSB53124.1"
                     /translation="MASVLTPRLLLRGFFVFVGISILGYAGVLLYGDNLPAFIEAAGH
                     IHWQWVLVGLGLASMDWFGGGLRNWVLVRHVHPNPPIGGMILSGGMGAWAAYLTPLNS
                     GAGPMMIYAMRRAGVPLPLAVTTTLMSFIATVLFFALAGPLAIFFGAGKSLGQHGNVL
                     GLTLYDLFIGSLGLFVGIGVVLVIVIVFPGIARDGLHKLAHRLSRKSTRVAARIEGLT
                     RGIDEAHHSVLAFNSPKGWLALVWATLLSGPSHANKLLAGYVALRAVGIHAHFVDVLL
                     VQTLITFLLYFAPTPGASGIAELLSTAVMSSVYLPRELGPLYTLIWRAILSYFTLAFG
                     FLVFSRWVHGRFKQQRGIDEDELAQEGAGA"
     gene            9334..12129
                     /gene="uvrA"
                     /locus_tag="VLD58_02170"
     CDS             9334..12129
                     /gene="uvrA"
                     /locus_tag="VLD58_02170"
                     /inference="COORDINATES: protein motif:HMM:TIGR00630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HSB53125.1"
                     /translation="MPDRTIRIVNARQHNLKGITVELPHRSLVVVTGPSGSGKSSLAF
                     DTLYAEGQRRYIESLSTYAKQFLERMPKPLVDRLEGIAPAVAIEQRNPTVSSRSTVGT
                     ATEIYDYLRLLWARVGRQQCRVCSGPVRKDTPQSASDDTLAATGSRLQVAFPLPASAR
                     QNHAAIVENLQALGFVRVLADGAPLHLEELPAGIDLAATSELLVIVDRLSGGAGSRDR
                     LTEALASAFGEGEGIAVVLHDEGRLRFTERPACSRCDTPAVTVTPALFSFNNPRGACA
                     GCNGFGAVLEYDESLIIPDPARSLAGGAIDPWTKPRYETRRRLLQNTAVKLGIDPEKP
                     WHKLKPKEQRELLHGKHGRYIGIFPFLKGLEEKRYKQYIRVFLRQYQLAKTCPVCQGS
                     RLNDQALAVRIGGETISALASRPVDQLHDWIARLALTEFERQVGQLIIDQLESRIGFL
                     RDVGLGYLTLDRLTRTLSGGEAQRISLSNALGSNLVDALYVLDEPSIGLHPRDIDRLL
                     GLLERLRNQGNTVVVVEHDPAAMRHADFMLELGPGAGEHGGQVVYAGPVEGAGDTLTG
                     QYLSGRKRIGVPSVRRRLGPWLKIRGAALHNLQGVDADIPLGALTAVTGVSGSGKSTL
                     VHDVLYRQLERRLHGGHSAKEHLGEVVGNVRELTGAELFQDVLLIDQSPIGRTPRSNP
                     ITYVKGFDEIRELFAAQPEARRRKLTAASFSFNMAGGRCETCEGAGAVMVEMVFLADV
                     YVPCEACGGTRYRPDVLDVKIQGQSVADVLQFTVDEAIRRFRHQPKLGQALWHLQQVG
                     LGYLRLGQPATTLSGGEAQRLKIARELAHSGKRSGRKLYILDEPTTGLHLDDVRVLIQ
                     VLDRLVDAGHTVVVIEHHLDVIKRADWVIDLGPEAGSGGGRIVAQGTPEAVAQVEQSH
                     TGRYLREVLVPAEALVG"
     gene            12126..13001
                     /locus_tag="VLD58_02175"
     CDS             12126..13001
                     /locus_tag="VLD58_02175"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HSB53126.1"
                     /translation="MTRRQAVFTLWTTCLIWGTAFPLAKLGLRDASPMAFSCARFVLA
                     SALLLPMLRGTTWEEWRHGAILALLLSLGFGLQTIGLNLTTPSRSGFITALYLVFVPV
                     ILWAIDRSLPDRWAALALVIALTGMFLLTRHDGQGGGPNLGDFLTLLSSISFAAHLVA
                     TGAFARRFRIERLMIGQIIVSTLITLVATPILETPRLHFTPLLLGVIAYEAVLATVVA
                     IPMQLAAQRVLTPTHTALIFTLEPVVAALASMLLVGELLTPVQWFGGLLILGGSLLPE
                     LGNRLSLPASADPAA"
     gene            13273..14637
                     /locus_tag="VLD58_02180"
     CDS             13273..14637
                     /locus_tag="VLD58_02180"
                     /inference="COORDINATES: protein motif:HMM:NF017591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase PhoX"
                     /protein_id="HSB53127.1"
                     /translation="MPIGSVTTRRTACLTALLLAAACSDDHVQSPADATGAVVENGVA
                     YHLDLNTHGLPFTGLASSASCSVGGGVEQVVLPTGFVATPVAKEGPGFPDLSDMNTEN
                     ESGVGSGRFLYRAHELTSNAGVSVTDLVTGETRVLAQRADWERFDGIAWTPWGTIIAA
                     EEASPSAAKDPAFPNAVGGHVYEIDPVTGAATTLAAVGARAHEGLRFDRQGNLYGISE
                     RSPGYIYKFVPDRKGDLTSGQLYVMKLVEDQGDRTGWGMWVPLDRESVKVNSDAAADA
                     AGATAYARPEDIEIGTSTGNDLRDNSTLYAAITGENRVLAIDLEPREPGHRGQVFVSD
                     YVRNGVNAPTDFTFPDNLALDKAGNLYITEDPGGNAAGGKTLGDDIWAAPFNPASRRQ
                     ARPAERFLSITDCEAEPTGVYFSVSGKTLFVNIQHRGGADPRDLALAIRRVSRVDFLQ
                     AASR"
     gene            complement(14588..15811)
                     /locus_tag="VLD58_02185"
     CDS             complement(14588..15811)
                     /locus_tag="VLD58_02185"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: protein motif:HMM:NF009395.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HSB53128.1"
                     /translation="MKPIIPTTSNVHVTRFEPLVPPAELLAELPISRDVATVVLEARR
                     TIARILSGDERRLMVIVGPCSIHDPKAALEYAGRLAALRRELGDVLYLVMRVYFEKPR
                     TTVGWKGLISDPHLDGTRDMVTGLRIARQLLLDINALGLPAATELLGPVVPQYIADLV
                     SWTCIGARTAESQTHRELASGLSMPVGFKNTTDGNLQIALDAMQAAGAPHTFLGMDND
                     GRSAIIHTTGNPERHLVLRGGGGRTNYDAESVSGAARLCAARGLPARMLVDCSHGNSN
                     KDCNRQPAVFREVLQQVASGSRHIMAAMLESHLHAGSQKVEHGAQGLAYGVSITDACI
                     DWPTTEAVLREGAEELRRAGVGSTDLPRRATGTGPAGGGGERLRAAAIWLPPSTLRGP
                     TWKRPAGSPRGRRAG"
     gene            15915..16820
                     /locus_tag="VLD58_02190"
     CDS             15915..16820
                     /locus_tag="VLD58_02190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase family
                     protein"
                     /protein_id="HSB53129.1"
                     /translation="MPELPDIRLYLHALHPRVLGATLEQLQILRPFFLRSVEVPPSVL
                     AGHHVVSVERLGKRIVLGFEGGYFAVIHLMIAGRFRWAARGGKAPGKIGLAAFGLSTG
                     TLLVTEAGTKRRASLHLVQGREHLAPFTRGGLDVESSTLAEFAAALRRENHTLKRALT
                     DPRILDGIGNAYSDELLHRAGLSPLSLTSRLGDEEMERLWLAAKTTLAEWTARLIAET
                     GEKFPEKVTAFRPGMAVHGRYNLPCPVCGTPVQRIRYAENETNYCPTCQTGGRLLADR
                     ALSRLLREDWPRSLEELDELRSPKP"
     gene            16817..>17023
                     /locus_tag="VLD58_02195"
     CDS             16817..>17023
                     /locus_tag="VLD58_02195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53130.1"
                     /translation="MSPALIRAIGRWTLAALMLNGVIGSSVFGLPSVIAGKLGAASPW
                     AWLIAALMISVVVACFAEVSSRFGR"
BASE COUNT         2762 a         6081 c         5518 g         2662 t
ORIGIN      
        1 cgtgcttcat ggaccagcta acggctaacg gctaacggcc aacggccaac ggccaaagcc
       61 attcgacaga ctttccatcg agccaggaac cgtccatact tccgtctcat gggcgacttc
      121 gaagtcattc gcgacccgct atgggacaac attcgtctcg acgggccggc cagcctcctg
      181 ctggacaccg cgcccatgca gcggctccgc tacgtccggc agctgggcca tgccttcctg
      241 gtctaccccg gcgcgaccca cacccgcttc gagcacgccc tcggcgctta tcacctgacc
      301 cgccgcgccc tcgcggcgct ggaggagcgg ggtgagctca agcaggtccc cgagcacgat
      361 tgtcttgccg ccaagctggc cgcgctgctc catgacatcg ggcactaccc cttctctcat
      421 gcgttggaag aggccgggtt cccccatcac gagggactcg gggttgcccg cctggcccgc
      481 gagccgctgg ccggagagat cgcgcgggtc ggggtgcccg ggctgggtga acagatcggg
      541 cagttcatta ctggccgcag cacgagcccc ctcaagggcc tcatctccgg ctcgctcgac
      601 ctcgacaaga tcgactacct gagccgcgat gcgcggatgt gcggcgttcc ctacggcgcg
      661 gtcgatgtcg accggctgct ggcgtcgctc accctcatcg aggtcgcgcc cggcaagctg
      721 gagctcgggg tccacgagaa aggcatcagc gccctcgagt cgctgctctt cgccaagtac
      781 cagatgtacc gcaacgtcta ctggcatcac gcggtgcgga gcgccacctg catgttcaag
      841 cgggcggtgc tggcggcagt cgcctcaggc cacctctcgg ccgccgaggt cgccgatgcc
      901 accgacgatg tcctgaccga acggctcttc gccgccgatc ccaccgggct cgcccgagcg
      961 gtccacggcc ggcggctctt caagcgggca ctcgatcttc ccgcgagcga cgttccggct
     1021 gagccggagc cgtggacccg gagccgaccc aacctgctcg aacgggtcga ggatcggctg
     1081 gccgaggaat gtggtctcaa gaagggggaa ctgctcttcg acttccccag caatccctcc
     1141 atgctcgcgg tcgacctgcc cctccgaacc cgcaccggca gcttcgaacg cctgaccggt
     1201 cagggtcgcg ccggccagtt cggtctcccc agggtggccg aggagctgta tgaaagcgcc
     1261 cgccggctcc gggtcttcac cgcgaggcca gtcacccgcg atctcacctc cgcccgcgaa
     1321 ctggtcggcc tgaccgccgc cgagctcgag gctcgtctcg gcgaaggacg gaacctgctt
     1381 taggctgggg gcttgccgga tccgagggcg ggtcccacca ttgttaggta gcgctccatc
     1441 cgaggctccc gatggtgacc gagtgtttct tctgcagctc cgtcctcccg cccaacgagg
     1501 acatcgagca ttgctcccac ggccagcggc tcgccttcga cgagcggcag ggacgcctct
     1561 gggttgtctg ccgcgcctgc ggccgctgga acctgacccc cgcggaggac cgctgggaag
     1621 ccatcgagga atgcgaacgg cgattccgtg agtgccgggt ccggctctgt accgacgaga
     1681 tcggcatggc gcggctaccg agcggactcg acctggtgcg gatcggctcc ccggtgctcc
     1741 ccgagttcgc ggcctggcgc tacggcgatc agttgcttcg ccgccggatt ctgggtgctc
     1801 cccgccggat ggtccgggca ctcgcctggc ccggagccat ggctgccggg accctcatcg
     1861 ccgcgtcagt cggcacggcc ggagctttgg cgtgggccgg cgcagccgcg ctcctctttc
     1921 accaccggcg ccgccgtccc gcggtatcgg ttccactcgc acggggcggc accctggccc
     1981 tcgcatcgga gcagatccag cacgccgagc tgattcgggc tgaagacgaa tcggagcaat
     2041 gggccatgtg ggtaggatgc gagccggacg acgcgccccc cgacgcccgc gtcgagtaca
     2101 ccgccgccgg tgagccccgg gcgctcctga ctggcggcga cggtcgggcc gctgccgccc
     2161 tgatccttcc gaccctcaac ccgctcggtg gcgaccccag gatggtgcag gcggcggtcg
     2221 gctggattca ggcggtgggt gggccttccc aggcgcttca caagttcgcc cgatcccggc
     2281 tggtgcgctc gccgctggac aacatcgagc ggactctggt tagcctccac cccgaagccc
     2341 ggctggcgct ggagatgtcg ctgcatgagg aggaggaaca gcgggcgctg cggggcgagc
     2401 tgacgattct gcggtgggcc tggaaacaag aggagacgct ggcgtccatc gccgacaaca
     2461 tgtggtgagt gagcgcctta ttcggccccg ttcagcggtt tctggatgac aggttcggcg
     2521 agattctcgc cgaacttctc tgttcggggg gggccccccg cgtccggcgg cggcttattc
     2581 gtgccggatc gcatcgatcg gtgatagccg cgacgcccgg agcgccgggt agatcccgaa
     2641 cgccaccccg acaaacaacg ccgccgccac caccaccagg aggctctggc ccgagaacgc
     2701 agcatacagc tgtgcctcgg tctgcgctcg caccactgcc gtgatgccga acgccgccgt
     2761 cactcccagc aacactccga tcccgctccc cagcccagag atcgccaccg attccgacag
     2821 gaactggagc aggacgtcgc gtggcctggc gcccagcgcc ttgcggacgc cgatctcgcg
     2881 ggtccgctcc gtcaccgatg cgagcagcac gttcatgatc ccgatcccgc ccaccaccag
     2941 tgagataccg gtgatcgcgc cgagaaagag cttgaaggtg ttcatccccc gccggacctg
     3001 ttccagccgc tgggcgctgg tctccacctt cacccggccc tcccagcggc cgtagcggcg
     3061 ggccagccag tcctcacccg cggcctgcag cgcgggcacc tgttccagac tccgggcctt
     3121 gaggtagatc gccggagcgc gcggacggcc gctgggcgga agcaggcttt tcgccgaacg
     3181 gagcgggacg tacgccagcc tggcccgctc accccggaag gaagaaagaa tgccgatcac
     3241 ccggcgcggc tcgccattga gccggatact ggccccgagc aggtcactgg gctcgccgtt
     3301 cgcggcgagt tccttggcga gcctgttcga gaccaccgcc accggcgcgt tgcgatccgc
     3361 ctcgacctcg gtgaagtaac ggccatccgc aaactcgagc cgctgaaaac tggcgttgtc
     3421 agccagcgtc gcgacgatcg taaccggacg ccggttcccc gcctgccctt cggcaaccgc
     3481 cgagccctga agggtcatgg agaccccggc aatgtcggcc atgcgccgga gctcgtcggc
     3541 atcggcctgg gtaaacaccg gatagtcgct gcggggaacg gtctggccgt cgatctcttc
     3601 ggtgagctgc ggctggagcg ccaccgtctg cacgtcggtg gtccgctcga tctcctcacg
     3661 ccccagccgc tccatcccgt cacccaggga gaggattgcc accagcgagg ccacgccgat
     3721 gatcaccccc agcgtcgaca acacggtacg gagtggattg gcgcgcagcg tctcgaagcc
     3781 gatgccgatc gatgcgatgt tggccaggtt catccggccg cctacgaggc tggaattgcc
     3841 cctgtttcag ggtgaacgat caatgccgga gaaagaaaaa ggcgggagag agaattctcc
     3901 cgcctgagag ccccaagcgc caagccccaa gcccatcagc gcttctgggc cggtgttccc
     3961 aggggattgg tgacttcggc cggcacatcc ggctcgatcc ggatgatgat ggcggtgatg
     4021 ttgtcgagcc cgccccggcg gttcgcctcg ttgatcagct tgtcgaccca ctgctgcggg
     4081 ccgccttcac ccgagaggat ctgggacagc tgttcgtcct ccagcatccc ggtgagccca
     4141 tccgaggcga gcagcaggat gtcacccgga tgcaggtgcc cgaagtagat gtccggcacc
     4201 acttcggcgt tggccccgat gcaccgggta atcacgttgc tgtacgggtg cacccgcgcc
     4261 tgctccggcg tcagcagccc gaggtccacc tgctcctgca cgtacgagtg gtctttggtg
     4321 acctgcagga agcgtccgtc ccggagcagg tacgcccggc tgtcgcccac ctggccgatc
     4381 aggtaacggt gcggcatcag gatgagcacc gtggtggtgg tgcccatgcc gcgcttgtcg
     4441 tgttcggtga gggtacggtc gaagatggcg gagttggctt cgatgatgga gtgccgcatc
     4501 cgctcgccgg cctggtcatc ggtcagcccg cgcagcgtgc ccagctcgcg ggagatgatc
     4561 cgcaccgcca tctcgctcgc cacctcaccg gcggcgtgcc cgcccatgcc gtcggccacc
     4621 acgaagacgc cgcggtcggc cagcatgagg tagttgtctt cgttgcccga ccggacgata
     4681 ccggtatcgg tgcgtgccgc gcaggagaag cgcacgagtt gccgttaccg ggtaagcagg
     4741 aaagctgcga cggcgccgag caccaggacc aggatgagcg ggatgatcca cttgggcatc
     4801 ccctgcttct cgggcgaggt gatcaccatc gggcggcgag ccgaccgggc cacgcccgga
     4861 tccggatgaa atccgggggc ctccatcgcc ggccgcgccg ccgaaggagt cggtcccccg
     4921 ctgaagctcg gttcgtggag cggtggcagc cccgggacgg acgataccgg gatctgcggc
     4981 acgggggccg gttgaggcgc gggtgacgag ggcttcatcg cgcccatcac cttggtgccg
     5041 gacccggctg ccgtccccat gtgatcgtcc gtcggctcga acatcgcgga aacctcgccg
     5101 aaccgcacca ccgcgccggg gcccagcatt gtctcgccag tcacccgttc gccatcgacc
     5161 caggtgccat tggtcgagtc gttgtcgatc agcacccaga tcccctcgcg gcgctgcagc
     5221 ttcgcatgcg ctccgctcac gctgtcgtcg ggaagaacca ggtcgttgta ctccgcccgt
     5281 ccgatgttca ccaccggcac ccggacagtc aggcgctgcc ccttgagctg gccgctccga
     5341 accaggaacg tggcgagggc cggcgtggtg ttgggagcgc ggggagcggg agccgcgcgg
     5401 ggcggctcgg gcgcgggcgc gggcgggggg gcgggcggct gggccggcgg catcccgtgc
     5461 atcgtgtgcg agagccgctc ggcggccccg gcggcggccg gaggcatggc tggcggcggc
     5521 gtgaagaccg gtgcgggcgg cggcgcggga gccgcaggag ccggcgccag cggcggcgca
     5581 ttcaccagcg agggcacatc gggcatccgg tcggcataga agcggaactc atggtcgccg
     5641 atccggatca catccgcccg ggccaggagc cgctgcgctt ccacccgctc ggcgttgacg
     5701 aaggtgccgt tggtgctgct gtctaccagg acgtagccct ggggtgaggc gaagatttcc
     5761 gcatgccggc gggaaacatc cttgttcggc accacgatat cgcaccccgc ctcacggccg
     5821 atcacgagcg gcgcggaacc gatggtgtat tcccggccgt ccgtcaggca gaccagacgg
     5881 ccgcccgtgg cggcggtcgg gggcttgggc gcggcaccgg gcttggccgt tgcggccacc
     5941 atccgcgcca cgtcgccggc gctcacgaac tgggtgctcc cgctgcgccg cggatcatgg
     6001 acgaagagct cgtgggcgcc aacctgaatc ttgtcgccgt gcagcaccgg ggccggttcg
     6061 gcaccgagct tcacgccatt gaggaagaca tcgttctcgc caacccggcg gacagcgacg
     6121 gagccgtcac cgataccgat gaccacggca tgcgccgccg acaatccgcc gagccggagc
     6181 ccgcaggacg gatcggtgcc gatcaccagc tcacccacgg ggatcggcgt acgctgtccg
     6241 gcaacttcca gttccatcat gctcgggcgc ctcgttgaag ccggatgcca aacgtacccg
     6301 gaggctcgta accacgcaag cgatacgggc ttacgcgctc aaggactggg gcttttcctg
     6361 ttcccccagc tgcagccggt gcaaccgctc gtacagcccc ccctgcgcca gcagcgcgcg
     6421 atgggtgccg cgctcccgga tttccccatg gtgcagtacc agtatctcat ccgcattcag
     6481 gatggtactc agccggtgtg ccaccaccag gctggtccgg ccccgcatca attcgcccac
     6541 cgccgactgg atctgggcct cggcctcggc gtcgaccgag gaggtcgcct catccagcac
     6601 caggatccgc ggatcccgcg ccagagcccg ggcgaacgac agcaactgcc gttcccccac
     6661 gctcagcgac cgaccccgtt cccccaggat gtgaccatac ccactaggta gacgctgaat
     6721 gaagcgatct gctcccactc gctccgccgc ctgcctggcc agcgccgggg taatcgcggc
     6781 gtccaggatc aggttgtggt tgatgtcccc ggtaaagagg aagagctcct gctggacgaa
     6841 cccgatgaga ccccgcagat cgcccggatc cagctcccgg atatctaccc catcgacggt
     6901 aacccggccc cgctccggat catagaagcg gagcaggaga ttgatgatcg tcgtcttccc
     6961 cgccccggta tggcccacca gcgcgattgt ctccccgggc cgtgcccgga acgagactcc
     7021 cttgagcacc cagcccggct cggacgggtc gctcggcgcc gagtagcgga accagacatc
     7081 ctcgaagacc acctcacccc tcaccggtga cgccaacttc gccgggtgta ccggcggccg
     7141 gacgctcggc tcggtatcga gtaggcggaa aatccgctcc gacgacgcca tcgcgctctg
     7201 gagcaggttg tacttctcgg acaggtcctg gagcggctgg aagaaacgcc gggtcagctg
     7261 gatgaacgcc gccagcaccc ccaccgtcag ggtcccgtcc agcacccggg ccccgccccg
     7321 ccagaggagc aacgccaggg caacgctggt caggaactcg accaccggaa agaacaccgc
     7381 atagatcgtg atcgaccgga ggtgggcccg gaggtggtca tcgttcacct tgccgaaggc
     7441 cttcgcctcc gccgcttccc ggccgaagag ctgaaccacc cgaaccccgg tgagatgctc
     7501 ctggaggaag gcgttgagcc gagccacccg tacccggatc tcgctgaacg aatcgcgcac
     7561 gtggcggcgg aaggtcaccg ccgcgaggat catgagcggg atcaccgcga acgccaccag
     7621 cgcgagccgc cagtcgacga tcagcatgtt caccacgatc gccaccaggg tgaacaggtc
     7681 gccgaagacg gtcaccaccc cggaggagaa gagctcgttg agcgtctcca catccgacgt
     7741 cacccgcgtc atcagccgcc cgaccgggtt gcggtcgaag tagctgacgc tgaggcgctg
     7801 cagatgggag aacacggtga ggcggaggtc ggccatgacc cgctggccca tccaggacgt
     7861 gagataggcc tggccgtagt cgcagagaaa ctcgaggacc agcgagccga gaaagaggag
     7921 cgcgagagtg cggaggaggt cgaagtcgcg cgatggcacc gccacgtcga gcgcccgctg
     7981 ggtcagggcc ggccctacca gcgtgagtcc cgcggtggtg aggagcagga gcagcgcgag
     8041 gagcgcgatt ccccggtacg gtgtgacgta gcggagcagg cgccgcatca gcgccgcgtc
     8101 gtagcctcgc tcttccgcct cggcgttggg gtcgttcaag ctccggcccc ttcctgggcc
     8161 agctcgtcct cgtcgatgcc ccgctgctgc ttgaagcgcc catgcaccca gcgggagaag
     8221 accaggaacc cgaacgccag cgtgaagtac gagaggatgg cgcgccagat cagggtgtag
     8281 agcgggccga gctcacgggg gagatagacc gacgacatca ccgcggtgga tagcagttcg
     8341 gcgatgcccg aggcgcccgg agtcggcgcg aagtagagca ggaaggtgat cagcgtctgc
     8401 accagcagca catcgacgaa gtgggcgtga atccccaccg cccggagcgc tacgtaaccg
     8461 gccagcagct tgttcgcatg cgatggaccg gagagaagcg tggcccagac gagggccagc
     8521 cagcccttcg ggctgttgaa ggccaggacg ctgtgatggg cttcgtcgat cccgcgggtc
     8581 agtccctcga tccgggcggc cacccgcgtg ctcttccggg acagtcggtg cgccagcttg
     8641 tggagcccgt cgcgcgcgat tcccggaaag acgatcacga tcaccagcac caccccgatg
     8701 cccacgaaca gaccgagact gccaatgaag agatcgtaca gggtgaggcc gaggacgttg
     8761 ccatgctgcc ccagcgactt gccggcgccg aagaagatgg cgagcggccc cgccagtgca
     8821 aagaagagca ccgtcgcgat gaatgacatc agcgtcgtgg tcaccgcgag cggcagcggc
     8881 acgccggcgc gccgcatggc gtagatcatc atcgggccgg cgccggagtt gagtggcgtg
     8941 agatacgccg cccaggcccc catcccgccg gagaggatca tgccgccgat cggcggattg
     9001 gggtggacat gccgcaccag cacccagttc cggagcccgc cgccgaacca gtccatcgag
     9061 gcaagaccca gcccgaccag gacccactgc caatggatgt gacccgccgc ctcgatgaac
     9121 gccggcaggt tgtccccata caggagaacc ccggcatagc ccaggatgga aatcccgaca
     9181 aagacgaaga aaccgcggag cagcaggcgg ggggtgagaa cggaggccat gagagcggga
     9241 atctaacccg tcgcccctgc ctctcaacag caaggccgcc ctctcgggca ccagcgcccg
     9301 catcgcgctt cacaccccgc ttagcttacg tggatgcccg atcgcaccat ccggatcgtc
     9361 aatgcgcgcc agcacaatct gaaaggcatc accgtcgagc tgccgcaccg gtcgctcgtg
     9421 gtggtgaccg gccccagtgg ctcgggcaag agctccctcg cgttcgacac gctctacgcc
     9481 gagggacagc ggcgctacat cgagtcactc tcgacctacg ccaagcagtt cctcgagcgg
     9541 atgcccaagc cgctggtcga ccggctggag ggcatcgcgc cggcggtcgc catcgagcag
     9601 cgcaatccca ccgtgtcgag ccgctccacc gtcggcaccg ccacggagat ctacgactat
     9661 ctccggctgc tctgggccag ggtcggacgg cagcaatgcc gggtctgcag cgggccagtc
     9721 cggaaggaca ccccgcaatc ggcgagcgac gacaccctcg ccgcgaccgg cagccgcctc
     9781 caggtggcgt tccccctccc cgcctccgcc cgccagaacc acgcggccat cgtggagaat
     9841 ctccaggcgc tgggcttcgt ccgggtgctc gccgatggcg ccccgctcca cctcgaggag
     9901 cttcccgccg ggatcgatct ggccgccacc agcgagctgc tcgtcatcgt cgatcggctg
     9961 agtggtggcg ccggcagccg cgaccgcctg accgaggcgc tggcctccgc cttcggcgag
    10021 ggcgagggaa tcgcggtggt cctccacgac gaagggcgcc tccgcttcac cgaacgcccc
    10081 gcctgctccc ggtgcgacac accggcggtc acggtcaccc cggcgctctt ttcctttaat
    10141 aaccctcgcg gcgcctgcgc cggctgcaac ggcttcgggg cggtgctcga gtacgacgag
    10201 tcgctcatca tcccggatcc ggcccggtcg ctcgccggcg gcgccatcga cccctggacc
    10261 aaaccccgct acgaaacccg gcgccgcctg ctgcagaaca ccgcggtcaa gctcggaatc
    10321 gacccagaaa agccctggca caagctcaag ccgaaggagc agcgcgagct gctgcacggc
    10381 aagcacggcc gttacatcgg gatcttcccc ttcctcaagg gtctcgagga gaagcgctac
    10441 aagcagtaca tccgggtgtt cctgcgacag taccagctcg ccaagacctg cccggtctgc
    10501 cagggcagcc gcctcaacga ccaggccctc gcggtccgga tcgggggcga gaccatctcc
    10561 gccctggcat cccgcccggt cgaccagctg catgactgga tcgcccggct ggcgctgacc
    10621 gagttcgagc ggcaagtcgg acagctgatc atcgaccagc tcgagtcccg tatcgggttc
    10681 ctgcgggacg tcggcctcgg ctacctcaca ctcgaccgcc tgacccgcac cctctccggc
    10741 ggtgaagccc agcgcatctc gctctccaac gccctcggct ccaatctggt cgacgcgctg
    10801 tatgtgctcg atgagccctc gatcgggctc catccccgtg acatcgaccg gctgctcggg
    10861 ctactcgagc ggctccgcaa ccagggcaac accgtcgtgg tggtggagca cgaccccgcc
    10921 gcgatgcgcc acgccgattt catgctcgaa ctcggacccg gcgcgggaga acatggggga
    10981 caggtggtct acgccggccc ggttgaaggg gccggggaca ccctgacagg gcagtacctc
    11041 tccggccgga agcggatcgg ggttcccagc gtgcgccggc ggctcggtcc ctggctcaag
    11101 atcagaggcg cggcactgca caacctccag ggagtcgacg cggatattcc cctcggggcc
    11161 cttaccgcgg tgaccggcgt ctccggctcg ggcaagagca cgctggtgca cgacgtgctt
    11221 tatcgccagc tcgagcgccg gctccacggg ggacactccg ccaaggaaca cctgggcgag
    11281 gtcgtgggga atgtccgcga gctgaccgga gcggagctgt tccaggacgt actcctgatc
    11341 gatcagtcgc cgatcggccg caccccacgc tccaacccga tcacctacgt caagggattc
    11401 gacgagatcc gcgagctctt cgccgcccag cccgaggccc ggcggcggaa gctcaccgcc
    11461 gcatccttct ccttcaacat ggcgggtggc cgttgcgaga cctgcgaagg ggccggcgcg
    11521 gtgatggtcg agatggtctt cctcgccgat gtctatgtcc cctgcgaggc gtgcggcggc
    11581 acccgctatc ggcccgacgt gctggatgtg aagatccagg gacagtccgt cgccgatgta
    11641 ctccagttca ccgtcgatga agccattcgc cgcttccggc atcagcccaa gcttggccag
    11701 gccctctggc acctgcagca ggtggggctc ggctacctca ggctgggaca gccggccacc
    11761 acgctgtccg gcggcgaagc gcagcggctc aagatcgccc gggaactggc ccactccgga
    11821 aaacgttccg ggagaaagct ctacatcctg gacgaaccga cgaccggcct ccacctcgat
    11881 gacgtacggg tcctcattca agtgctcgac cggctggtcg acgccggcca caccgtcgtg
    11941 gtgatcgaac accacctcga tgtcatcaag cgcgccgact gggtcatcga cctcggcccc
    12001 gaagccggca gcggcggggg acggatcgtg gcccagggca ctcctgaggc tgtggcccag
    12061 gtggagcagt cccacaccgg ccgctacctc agggaagtcc tcgtcccggc agaagcgctc
    12121 gtcggatgac ccgccgacag gcggtcttca cgctctggac cacctgcctg atctggggaa
    12181 ctgcattccc cctggccaag ctgggcctgc gcgatgcttc gccgatggcc ttcagctgcg
    12241 cccggttcgt cctggcatcc gcgctgctgt tgccgatgct cagaggcacg acctgggaag
    12301 agtggcgcca cggtgccatc ctcgcgctcc tcctctccct cggcttcggg ctgcagacca
    12361 tcgggctcaa cctgacgacg cccagccgct ccggcttcat caccgcgctg tacctggtct
    12421 tcgtccccgt catcctctgg gcgatcgacc ggagtcttcc cgaccgctgg gctgcactgg
    12481 cgctcgtcat cgccctgacc gggatgtttc tgctgacccg tcacgacggc cagggaggcg
    12541 ggcccaatct cggcgatttc ctgaccctcc tctcgtccat ctcctttgcc gctcacctgg
    12601 tcgcgaccgg cgcctttgcc cggcgcttcc ggatcgagcg gctgatgatc ggccagatca
    12661 tcgtctccac cctgatcacc ctggtggcca caccgattct cgagaccccg cggctccact
    12721 tcaccccgct gctcctcggc gtcatcgcgt acgaggcagt actggcgacc gtggtggcga
    12781 tcccgatgca gctcgccgca caacgggtgc tcaccccgac ccacaccgcc ctgatcttca
    12841 ccctggagcc ggtggttgca gcgctggcga gcatgctcct cgttggtgaa ctgctcaccc
    12901 cggtgcagtg gttcggcggc ctgctcatcc tcggcggaag cctgttaccg gagctgggca
    12961 accgtctctc cctccccgcg agcgctgacc cggccgcctg accgcggcag gttacgtcgc
    13021 agaaccacac gtaccgctgt ggttcgcctc acctgacgtc gagatcatcc ggccaaccct
    13081 ctccatctga ccccaccgga cggcacgcgc cggtcgcgtt tcccggtgca tcgacccgga
    13141 cgatcgctgc cgcgcccgca ccttgaccct gtgacacgca cgtgacctcc ccggcgatgg
    13201 agcgttgcgc ggtgccggta aggtatcccc gctcattgct ccgtctgtct acctctttct
    13261 caggagtttg ccatgcccat cggttcggtg accacgagac gcaccgcctg cctgacggcg
    13321 ctgctgctcg cggccgcctg ctcggacgac cacgttcagt ctcccgccga cgccaccggc
    13381 gcggtggtgg agaacggtgt cgcctatcat ctcgatctca atacccacgg gctgccgttc
    13441 acggggcttg cctcctccgc ctcctgcagt gtgggtggcg gcgtggagca ggtcgtgctc
    13501 cccaccggtt tcgtggcgac gcccgttgcg aaggaagggc ccggctttcc cgatctctcc
    13561 gacatgaaca ccgagaatga gagcggcgtt ggctccggcc gcttcctcta tcgcgcccac
    13621 gagctgacct ccaacgcggg cgtctcggtc accgacctcg tcacgggtga gacccgggtg
    13681 ctggcgcagc gggccgactg ggagcgcttc gacggtatcg cctggacccc gtgggggacc
    13741 atcatcgccg cggaagaagc gagtccctcc gcggccaagg acccggcctt ccccaacgcg
    13801 gtcggtgggc acgtgtatga gatcgacccc gtgaccggcg cggcgactac cctggcggcc
    13861 gtcggcgccc gcgcgcacga gggtctccgc ttcgatcggc agggcaacct ctacgggatt
    13921 tccgagcgga gccccgggta catctacaag ttcgtgcccg accggaaggg cgacctcacc
    13981 tcgggtcagc tgtacgtcat gaagctggtg gaggatcagg gggaccggac cggatggggc
    14041 atgtgggtgc ccctcgaccg cgaatcggtc aaggtcaact ccgatgcggc ggccgacgcc
    14101 gccggcgcca ccgcctacgc ccgccccgag gacatcgaga tcggcaccag caccggcaac
    14161 gacctgcggg acaacagcac cctgtacgcg gcgatcactg gtgagaaccg ggtcctcgcc
    14221 atcgacctcg agccccgcga accgggccat cgcgggcagg tcttcgtttc cgattatgtc
    14281 cgcaacggag tcaacgcgcc gaccgacttc accttccccg acaacctcgc cctcgacaag
    14341 gccggcaacc tgtacatcac cgaggatccg ggtgggaatg cggccggtgg caagacgctg
    14401 ggcgatgaca tctgggccgc gcccttcaac cccgcgtccc gtcgtcaggc ccggccggcg
    14461 gaacgtttcc tgtcgatcac cgactgcgaa gccgagccga ccggggtgta cttcagtgtg
    14521 agtggcaaga ccctgttcgt gaacatccag caccggggtg gcgcggaccc gcgcgatctg
    14581 gcgctcgcta tccggcgcgt ctcccgcgtg gacttcctgc aggccgcttc caggtaggtc
    14641 cccgcaacgt cgagggcggc agccagatgg ctgccgccct cagtcgttcc ccaccgccgc
    14701 cggccggtcc ggtacccgtt gcccgccggg gcaagtctgt cgacccgact cccgcgcggc
    14761 ggagctcctc cgcgccctcg cgcagcactg cctcggtcgt cggccagtcg atgcaggcgt
    14821 ccgtgatgga gacgccgtac gccagtccct gcgccccatg ctccaccttc tggctgccgg
    14881 catgcaggtg gctctcgagc atcgccgcca tgatgtgccg gctgccgctc gcgacctgct
    14941 gcagcacctc ccggaacacg gccggctggc ggttgcagtc cttgttggaa ttgccgtggc
    15001 tgcagtccac cagcatcctc gccggcagcc cgcgggccgc gcagaggcga gcggccccgc
    15061 tcaccgactc ggcatcgtag ttggtccggc cgccaccacc ccggagcacg agatgccgct
    15121 cggggttgcc ggtggtatgg atgatggcgc tccggccgtc gttatccatg ccaaggaagg
    15181 tgtgcggggc gccggcggcc tgcatcgcat cgagcgcgat ctgcagattg ccatcggtcg
    15241 tgttcttgaa gcccaccggc atcgacaggc cgctcgccag ctcgcgatgg gtctgggact
    15301 cggcggtccg ggcgccgatg caggtccagc tcaccaggtc ggcgatgtat tgcggcacca
    15361 ccggtcccag cagctcggtc gcggcgggaa ggccaagcgc gttgatgtcg agcaggagct
    15421 gccgcgcgat ccggagcccc gtcaccatgt cgcgggtgcc gtcgaggtga ggatcgctga
    15481 tcaggccctt ccatcctacc gtggtccgcg gcttctcgaa gtacacccgc atcacgaggt
    15541 acagtacatc gccgagctcg cggcggagcg cggccagccg gccggcgtac tccagcgcgg
    15601 ccttgggatc atgaatcgag cacggcccca cgatcaccat cagtcgccgc tcatcccccg
    15661 acaggatccg cgcaatggtg cggcgcgcct ccagcaccac cgtggccaca tcccggctga
    15721 tgggcagctc cgccaggagc tccgccggcg gcaccagcgg ctcgaagcgg gtgacgtgga
    15781 cgttgctggt ggtgggaatg atgggcttca tcgacgacat tgccgctccg gcatccgatt
    15841 tgaacaggga gcataaagat gcgcccccct gactggtcgc gccagagccg gggcaaggat
    15901 acccttcaca cttcatgcct gaacttcccg acatccgcct gtatctgcac gcgctccacc
    15961 cccgggtgct gggcgccacg ctggagcaac tccagatact gcggcccttc ttcctccggt
    16021 ccgtcgaggt gcctccctcg gttctcgcgg ggcaccatgt ggtctccgtc gaacggcttg
    16081 gcaaacgaat tgtgctcgga ttcgagggtg ggtacttcgc cgtcattcac ctcatgatcg
    16141 ccggccgctt ccgctgggcg gcccggggcg gaaaggcccc cgggaagatc ggactcgccg
    16201 ccttcgggtt gagcaccggc accctgctcg tgaccgaagc cggcaccaag cggcgcgcat
    16261 ccctccacct ggtgcagggc cgggagcatc tggctccatt cacccggggc gggctcgacg
    16321 tggagagctc gacgctcgcc gaattcgccg cggcgcttcg acgggagaat cacaccctca
    16381 agcgcgccct caccgatccg cggatcctcg atggtatcgg caacgcctac tccgacgagc
    16441 tgctccatcg cgccgggctc tcccccctct cgctgacgag ccgtctcggc gatgaggaga
    16501 tggagcgact ctggctggcc gcgaaaacca ccctggccga atggaccgcg cggctcattg
    16561 ccgaaactgg agagaagttc cccgagaaag tgacggcgtt ccgtcccggg atggcggtcc
    16621 acggccgcta caatctcccc tgcccggtct gcggcacccc ggtccagcgg atccgctacg
    16681 ccgagaacga aaccaactac tgcccgacct gtcagaccgg tgggcgtctc ctcgcggatc
    16741 gggcgctctc gcgactgctc cgcgaggact ggccccgctc cctcgaggag ctggacgagc
    16801 tccggagccc taagccgtga gtcccgcgct gatccgcgcc atcggacgct ggaccctggc
    16861 cgcgctcatg ctgaacgggg tgatcggcag cagcgtcttc gggcttccca gtgtgatcgc
    16921 cggcaaactc ggcgccgcca gcccctgggc ctggctgatc gcggcgctca tgatctcggt
    16981 cgtggtggcc tgcttcgccg aagtctcgtc acggttcgga cgg
//
LOCUS       DATIFF010000144         1210 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_636466, whole genome shotgun sequence.
ACCESSION   DATIFF010000144 DATIFF010000000
VERSION     DATIFF010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1210
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_636466"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..444)
                     /locus_tag="VLD58_02200"
     CDS             complement(<1..444)
                     /locus_tag="VLD58_02200"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HSB53131.1"
                     /translation="MTSRQSTLPEGTANREIVVTRVFEAPRELVWRAWVEQRHVARWW
                     GPNGFTTTTHEMDVKPGGLWRFIMHGPDGTDYDNLIEYLEVVPPERLVYDHSGGTAFR
                     VTVTFAEEGRGTGLTMRSVFPSVAERDRVVREFRAIEGANQTLGRL"
     gene            complement(571..924)
                     /locus_tag="VLD58_02205"
     CDS             complement(571..924)
                     /locus_tag="VLD58_02205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSB53132.1"
                     /translation="MASDQLSTTLAALADPTRRAILTRLAAGERTVTELAEPFDMSLP
                     AVSKHLKVLEKAGLIARGRDAQWRPCRLEAKPLREVADWVERYRRFWEQSFDRLEGYL
                     KELQQEEKAHGRRNR"
BASE COUNT          180 a          425 c          397 g          208 t
ORIGIN      
        1 aaggcggccc agggtctggt tggcgccctc gatggcccgg aattcccgca ccaccctgtc
       61 gcgctccgcg accgagggga agaccgagcg catggtgagc ccggtcccgc gcccttcttc
      121 ggcgaaggtc actgtaaccc ggaacgcagt tccgccgctg tggtcgtaga ccaggcgctc
      181 gggcggcacc acctcgagat actcgatcag gttgtcatag tcggtgccat ctgggccgtg
      241 catgatgaag cgccacagac cgcccggttt tacgtccatc tcgtgggtcg tcgtcgtgaa
      301 gccgttcggc ccccaccatc gggccacgtg ccgctgctcg acccaggccc gccacaccag
      361 ttcgcggggg gcttcgaaga cccgcgtgac gacgatctca cgattcgctg ttccttcggg
      421 aagggtgctt tgccgggacg tcatgactct gctccggtgg aggtcttcgc caggtaccgc
      481 cacgtaacga ggagcacact cctcagctcc ggagcccgcg cggcccacct tccgccgcgg
      541 tcggcgaacg gctccggctc tgtggccgcg ctagcgattc ctgcggccat gtgccttctc
      601 ctcctgctgc agctccttca gatagccttc caggcgatcg aagctctgct cccagaaacg
      661 gcggtagcgt tccacccagt ccgcgacttc ccggagcggc ttcgcctcaa gccggcaggg
      721 ccgccactgg gcatcgcggc cgcgcgcgat caggcctgcc ttctccagca ccttgagatg
      781 cttcgagacg gcggggaggc tcatgtcgaa cggttccgcc agctccgtga ccgtgcgttc
      841 ccccgcggcg aggcgcgtga gaatcgcgcg ccgcgtgggg tcggccagag ccgcgagggt
      901 ggtactgagt tgatcggatg ccacgaccac gggcgccgcc agtgtaatta actgagtggt
      961 taaatacagc agtctccgac ggctgtcaag cgcgcccggc cggggcctca cccgagccgg
     1021 cctcgccggg taagttggtc gccccggggc gaggcaccgg cccggaatcc ccgatcaccg
     1081 actactgaaa ggaccgtcca tggcggcgac gcgatgcgtg gtcaaccttt cgttgttcgc
     1141 gatcctggcc gcggcatgcg ccgggccggc gggagcaccg gcgccgtcgc cggctgcttt
     1201 ggagacgatc
//
LOCUS       DATIFF010000145         1775 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2175416, whole genome shotgun sequence.
ACCESSION   DATIFF010000145 DATIFF010000000
VERSION     DATIFF010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1775
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2175416"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1775)
                     /locus_tag="VLD58_02210"
     CDS             complement(<1..>1775)
                     /locus_tag="VLD58_02210"
                     /inference="COORDINATES: protein motif:HMM:NF025707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53133.1"
                     /translation="GAPWARRSDRPISSLAGATSASTGDVVASTVSTENTELGYVSPP
                     GVRGGLNGKGGSQGEFGTQINERALRVLGKGVGLGQRAEAYFRFPSGPQNLLRYRELR
                     AWLRGRGPGWDNHDFVGYVRVGSDSRNFYEYRTQPVTTTWEPELRVDLGRWRTLRARI
                     ESRRLQGLPADSAARVACGGDTVSVAYVECDGPYLIYIEDPAVNPPNLAQVQELAAGI
                     IRVGTADPTQDAELWVDDIRLVDPISRVGSAIAVDARLVAADVAEFSGSYIRQDGYFQ
                     QIGQQPSYRTTGTFQFGSGVRLDRFLPASLGIVVPLQVSYTRADVAPQLLTGTDIEGG
                     DLAGLRKPFNWSLAYNISLRRAQPGKSWLVRGLVDPLSLSASFANGRNVSELSSASSN
                     SHDLNAQYNLNPGRTGVGLDLGGVVDHLPGFLKNSDGGAGLRHPFLSLAPSNVRMATG
                     LTRTESDLLAYDVPVRRAADSLVSAVTSLQHLWRNGGGLSWQPLGMLGLTADLASTRD
                     LREYPDSTPLGRLATASRRRFLGLDVGVERDRQLNTALNLNPRFTSWLRPRYITGSTF
                     VLSRSLSSRTPIREDGDTAGAFILP"
BASE COUNT          271 a          611 c          633 g          260 t
ORIGIN      
        1 cgggaggatg aacgcgcccg cggtgtcgcc gtcctccctg atcggggtcc ggctggagag
       61 gctccgcgag aggacgaagg tactgccggt gatatagcgg ggccggagcc aggacgtgaa
      121 tcggggattg aggttgagag ccgtattgag ctggcggtcc cgctccaccc cgacatccag
      181 ccccagaaag cggcggcggg aggcggttgc gaggcggccg agaggcgtcg aatcagggta
      241 ctcgcgcagg tcccgcgtgc tcgccaggtc ggccgtcagg ccaagcatgc cgagcggctg
      301 ccagctcaac ccgccgccgt tccgccagag atgctgcagc gacgtcaccg cgctgacgag
      361 ggaatcggcg gcccgccgca ccggcacgtc gtaggcaagc aggtcgctct ccgtccgggt
      421 caggccggtg gccatccgca cgttgctggg ggcaaggctc aggaacgggt ggcggagacc
      481 ggcgccgcca tcgctgttct tcaggaatcc gggcaggtga tctaccaccc cgcccaggtc
      541 gaggccaact ccggtccggc ccgggttgag gttgtactgc gcgttgaggt cgtgggaatt
      601 gctgctggcc gacgacagct cgctgacgtt gcgtccgttg gcgaagctcg cgctcagcga
      661 cagcggatcg accaggcccc gcaccagcca gctcttgccg ggctgggccc gtcggagcga
      721 gatattgtag gccaggctcc agttgaacgg tttgcgcagg cccgccaggt cccccccctc
      781 gatgtcggtc ccggtgagga gctggggcgc cacatcggcg cgcgtgtagc tcacctgcag
      841 tggcaccacg atgccgagag acgccggcag gaaacggtcc agccgcacgc cgctgccgaa
      901 ctggaacgtg ccggtcgtgc ggtagctcgg ctgctggccg atctgctgga agtagccatc
      961 ctggcggatg tagcttcccg agaactcggc cacatccgcc gccaccaggc gcgcgtccac
     1021 ggcgatggcc gagcccacgc gggagatcgg gtccaccagg cggatgtcgt ccacccacaa
     1081 ctcggcgtcc tgggtgggat cggccgtccc cacccggatg attccggccg cgagctcctg
     1141 gacctgcgcg aggttgggcg ggttgacggc aggatcctcg atgtagatca ggtacggccc
     1201 gtcgcactcc acgtacgcca ccgagacggt gtcgcccccg caggcgaccc gggctgcact
     1261 gtcggccgga aggccctgaa gccggcggga ttcgatccgt gccctgaggg tgcgccagcg
     1321 ccccaggtcc acccgcagct cgggctccca ggtggtcgtg accggttggg tgcgatactc
     1381 gtagaagttg cggctgtcgc tgcccacccg cacgtagccc acgaagtcgt gattgtccca
     1441 ccccggtccg cggccccgga gccaggcgcg gagttcgcga taacgcagca gattctgcgg
     1501 gccgctgggg aaccggaagt acgcctcggc ccgctgaccc agcccgaccc ccttgcccag
     1561 aacccggagc gcgcgctcgt tgatctgggt accgaattcc ccctgactcc cgcccttgcc
     1621 gttgagcccg ccccgcaccc cgggcggcga gacatagccg agctcggtgt tctcggtgga
     1681 gacggtggag gcgaccacgt cgccggtcga ggcgctggtg gcgccggcca ggctcgagat
     1741 gggacggtcg gagcggcgcg cccacggcgc accca
//
LOCUS       DATIFF010000146         2491 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2175798, whole genome shotgun sequence.
ACCESSION   DATIFF010000146 DATIFF010000000
VERSION     DATIFF010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2491)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2491)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2491
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2175798"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..807)
                     /locus_tag="VLD58_02215"
     CDS             complement(<1..807)
                     /locus_tag="VLD58_02215"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSB53134.1"
                     /translation="MESTRPLTGVLAAPLVASGVIGERLRARDWSNTTLGAASGWSAA
                     LRTAVSIMLSSPDPMLICWGSERTFLYNDALGRLLFPREADLLGQPIADAIPDLWSQV
                     NQVVARTLAAAEARVEAPCRVRVVRPAPFRPVACQFTCARIAPLEGAEGGVLCTLREE
                     PVRWTAGGQDERFLQFMQNLPGLAWIKDEVGRYVYANEAALAAFGVAEEELLGRVDHE
                     VFGEETALRFRAADEQALAADVGIQVVERLMHPDGSEHVSLVSKFPLRYSQ"
     gene            1099..1590
                     /locus_tag="VLD58_02220"
     CDS             1099..1590
                     /locus_tag="VLD58_02220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53135.1"
                     /translation="MAPLPDSARGLLRHSVATLSYRIAKILAGTPDSFAAYAAGPGSR
                     TPAQILAHMGDLLDWALSMAKGKQAWRDSTPLPWAEEQARFFTALLAFDAWLAGDEPL
                     GYAAERLFQGPVADALTHAGQIAYLRRMAGLPPVRGENYAKAVIEAGAIGPTYSSRRV
                     EFD"
     gene            1625..2227
                     /locus_tag="VLD58_02225"
     CDS             1625..2227
                     /locus_tag="VLD58_02225"
                     /inference="COORDINATES: protein motif:HMM:NF009205.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HSB53136.1"
                     /translation="MSRTEATEQPFSRMLDPVGERLLRARTIIISGEINQRLTSIVSA
                     QLLALAAESDAPITLFINSQGGHVEAGDTIHDIIRFVRAPVRIVGTGWVASAAALIFV
                     SVPLDQRYCLPNTRFLLHQPAGGAGGTASDIDIEAKEIIRMRDRLNRLFAKATGQPLE
                     RIEEDTHRNFWLEASAALRYGLVGRIIERATELDIPAVPA"
     gene            2274..>2491
                     /locus_tag="VLD58_02230"
     CDS             2274..>2491
                     /locus_tag="VLD58_02230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53137.1"
                     /translation="MAVSMRLYLAPDSDLYAFTGAPRTLQKWLRSRRSIADMWLHGYW
                     RHIDALLVSEAKAYAKHSPLSPLGGDFV"
BASE COUNT          409 a          916 c          788 g          378 t
ORIGIN      
        1 ctgggagtag cggagcggga acttgctcac cagcgacacg tgctccgacc cgtcgggatg
       61 catcagccgc tcgaccacct ggatccccac atcggcggcc agggcctgct cgtccgccgc
      121 ccggaagcgc aacgcggtct cctcgccgaa cacctcgtga tccacccggc caagcagctc
      181 ttcctcggcg acaccaaagg ccgccagcgc ggcttcattg gcgtacacat agcgcccgac
      241 ctcatccttg atccacgcga gccccggaag gttctgcatg aactgcagga agcgctcgtc
      301 ctggccgccg gcggtccagc gcacgggctc ctcccggaga gtgcagagta cgccaccctc
      361 cgctccctca agcggagcga tccgggcgca ggtgaactgg caggccacgg ggcgaaaggg
      421 agccgggcgg accacccgca cccggcaggg cgcctcgact cgcgcctcgg cggcggccag
      481 cgtgcgggca acgacctggt tgacctgtga ccagagatcc ggaatggcgt cggcaatcgg
      541 ctggcccagc aggtcggcct cgcgcggaaa gagcagccgg cccagcgcgt cattgtagag
      601 gaaggtccgc tcgctgcccc agcagatcag catcgggtcg ggggaggaga gcatgatgct
      661 gacggcggtg cgaagggcgg cggaccatcc cgacgccgcg cccagcgtgg tgttcgacca
      721 gtcccgcgcg cgcaggcgct cgccgatgac gccggaggcg acaagcggcg cagcgagcac
      781 tcccgtgaga gggcgcgtgg actccatcga acatcctgtc ttgaggtgcg gagctgtcgg
      841 tcggggctgc cgcccggcct gacccgcaat acgccaacta tacgaccagt ccccgcaggg
      901 ggacagagag attcgacaca gtgtggcaac agttctccag ggtcaagccg cttctcatcc
      961 cggagtgtga cgcgtttcca agactcaggt agcgtttccg gccagtatga ccagacggga
     1021 agccaggtcg ccatccaggt cgctacaata cccgcccgag gtgatactgt tctccatccc
     1081 ccgacacagc tcaactcaat ggccccccta cccgacagcg cgcgcggcct gcttcggcac
     1141 agcgtcgcca ccctgagcta ccgcatcgcc aagatcctgg ccggtacgcc cgactccttc
     1201 gcggcatacg ccgccggccc gggatcgcgg acgccggcgc agatcctggc gcacatgggc
     1261 gatctcctcg attgggccct ctcgatggcg aagggcaaac aggcctggcg tgactctacc
     1321 ccactcccct gggccgagga gcaggcccgc ttcttcacgg ccctgctggc cttcgacgcc
     1381 tggctcgccg gggacgagcc gctcgggtac gccgccgagc ggctctttca ggggcccgtg
     1441 gcggatgcgc tcacccacgc ggggcagatc gcctatctcc ggcgcatggc cggcctccct
     1501 ccggttcgcg gggagaacta cgccaaggcc gtgatcgagg ccggcgccat cggcccgacc
     1561 tactcctccc gccgcgtgga attcgactga ctatcttccg gcatcccttt cacccagacc
     1621 gtccatgtca cgcaccgaag ccaccgaaca gcccttctcg cgcatgctcg accccgtcgg
     1681 cgagcggctc ctccgggccc gcaccatcat catcagcggc gagatcaacc agaggctcac
     1741 ctccatcgtg tcggcccagc tgctggcgct cgcggccgag tcggacgcgc ccatcaccct
     1801 cttcatcaat tcccagggtg gccacgtcga ggccggcgac accatccacg acatcatccg
     1861 ctttgtgcgt gccccggtgc ggatcgtggg aaccggctgg gtggcgagcg ccgccgcgct
     1921 gatcttcgtt tcggtgccgc tcgaccagcg ctactgcctc cccaataccc ggttcctcct
     1981 gcaccagccg gccggtggcg cggggggcac tgccagcgac atcgacatcg aggccaagga
     2041 gatcatccgg atgcgggacc ggctcaaccg gctcttcgcc aaggcgaccg gccagccgct
     2101 ggagcggatc gaagaggaca cccatcgcaa cttctggctc gaggcgagcg cggcgctgcg
     2161 ctacggcctg gtgggccgca tcatcgagcg ggccaccgag ctggacatcc cggccgtgcc
     2221 ggcctgagat ccgccgcgcc agcgctgtct gactggttcc ggtctcccgc tctatggccg
     2281 tcagcatgcg gctgtacctc gcccccgatt cggatctcta tgcctttacg ggggctccgc
     2341 gcaccctgca gaaatggctc cggtcccgtc gcagcatcgc cgacatgtgg ctgcacgggt
     2401 actggcgcca catcgacgcg ctgctggtga gcgaggcgaa ggcatacgcc aagcactcac
     2461 ctctctcacc gctggggggc gatttcgtct a
//
LOCUS       DATIFF010000147         3154 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1714086, whole genome shotgun sequence.
ACCESSION   DATIFF010000147 DATIFF010000000
VERSION     DATIFF010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3154
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1714086"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1673)
                     /locus_tag="VLD58_02235"
     CDS             complement(<1..1673)
                     /locus_tag="VLD58_02235"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSB53138.1"
                     /translation="MLTSIVRFAVRRPGIVAGLAVTLVAYGLSIVARAKLDVFPEFAP
                     PQVSIQTEAPGFSPEQVEVLVTKPIEDAINGVNGLAALRSQSIQGLSVITAVLKEGTD
                     LRQARQLIAERLAEIPGRLPGSVAAPVLTPLTSSSSTVLMLGVTSTSRTPLEQRSFVD
                     WVLKPRLLATPGVSKVAVFGGEVRQLQVQVRPEQLRRYGLGLADVLEASSRATGLRGA
                     GVIDDPNQRIVVTTEGQALSPEALSRTALRAAPGSILRLGDVAVVREGAATRFGDATI
                     DGGPGIVVVVSGQLGANTKEVASAVEEVLQDLAPTFDAERLTLHPGLFRPASFIDVAI
                     RNITTALLVGALLVAVILLLFLFDLRAAAISLTAIPLSLLSAIIVLDRFGFSLNTLTL
                     GGLAIALGEVVDDAIIDVENIARRLRLNRASPAPLPIRDVVFNASLEVRHSVVYATFV
                     VALVFAPVLTMSGVQGALFQPLAIAYILATLASLVVALLVTPALALLLLAPREGASHE
                     SFVLVGARRHFERLLSRVVDRPGAVLGVTVAFCAGAILVLPLFDSTFLP"
     gene            complement(1673..2635)
                     /locus_tag="VLD58_02240"
     CDS             complement(1673..2635)
                     /locus_tag="VLD58_02240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53139.1"
                     /translation="MNWRAALLLATGLGCSGPKGAGNTAKESAANSQSAEPSHVVEEK
                     GEVGVTLDSATVARIGIEASPLRGASRGPETELPATIVADPEATSFVRAGVAGRLSRL
                     DGVAWPRFGSHLESGESLAVIGDARPVMVARGGTVSRVLVQPGELVQAGQDLLELTRY
                     DAPLVQVTWTGTAGEPPSALEFSAARAPRARVRGALVGPAPEADPITREPAWLYRVSG
                     GWKGMRPGANVSAWVADSRSSSRGVLIPSAAVVQWDALAWAYVEREPGRFVRVRVPTE
                     HPVQDGWLASSGFSAGDRVVTRGAGQLLSEEFRARIVVGEEVGE"
     gene            complement(2632..>3154)
                     /locus_tag="VLD58_02245"
     CDS             complement(2632..>3154)
                     /locus_tag="VLD58_02245"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSB53140.1"
                     /translation="AEYQVAEGDLRLEVANAAPDLTLGPGIFFDQGTGKFTLGLGFPS
                     LSLNRNRGPIREAGARRELAGSRLMQEQERVLEEVDAALAQCQLSAREVTAVDSLTTE
                     AERRHALLAAAWNRGEVGRLEVLVASLEVLRARRLGLESRLRQWDAGAGLERAVGAWG
                     LRQDGDWPRKRTE"
BASE COUNT          544 a         1124 c         1067 g          419 t
ORIGIN      
        1 tcggggagga aggtgctgtc gaagagcgga agcaccagga tggctcccgc gcagaaggcg
       61 accgtgactc cgaggacggc gccagggcgg tccacgaccc ggctcagcag ccgctcgaag
      121 tggcgccgag cgccgaccag cacgaacgac tcgtggctag ccccttcgcg gggggcgagc
      181 agaaggagtg cgagggccgg tgtcaccagc agggcgacga ccagggatgc aagcgtggcg
      241 aggatgtagg caatggcgag gggctgaaac agcgctccct gcactccact catggtgagc
      301 accggggcaa acacgagggc gaccacgaac gtggcgtaga ccacgctgtg ccgcacctcc
      361 agggaggcgt tgaaaaccac gtcccggatc gggagcggcg ccgggctcgc gcgattgagc
      421 cgcagccggc gggcgatgtt ctcgacgtcg atgatggcgt cgtccaccac ctcgcccagc
      481 gcgatcgcga ggccgcccag cgtcagggtg ttgagactga acccgaaccg gtccagcacg
      541 atgatggccg agaggagcga gagcgggatc gcggtcaacg aaatcgccgc ggcccggaga
      601 tcgaagagaa agagcagcag gatcaccgcg accagcaacg ccccgaccag gagcgcggtg
      661 gtgatattcc ggatggcgac atcgatgaac gatgccggcc ggaagaggcc gggatggagc
      721 gtcagccgtt cggcgtcgaa cgtgggcgcc aggtcctgca gcacctcctc gaccgcggag
      781 gcaacttcct tggtattggc cccgagctgc cctgacacca cgacgacaat gcccggcccg
      841 ccgtcgatcg tggcatcgcc aaaccgggtg gccgcgcctt cgcgcaccac cgcaacatcg
      901 cccagccgaa ggatgctgcc cggtgccgcg cgaagggcgg tgcgcgacaa tgcctccgga
      961 ctcagcgcct gcccttcggt cgtcaccacg atgcgctggt tcggatcgtc gatgaccccc
     1021 gcgccccgga ggccggtcgc acggctcgat gcctccagca cgtcggccag gcccagaccg
     1081 tagcggcgaa gctgttccgg ccgcacctgc acctgcaact gccgcacctc tccgccgaat
     1141 accgccacct tgctcacgcc cggcgtggcg aggagccgcg gcttgagcac ccagtcgaca
     1201 aagctcctct gctccagggg ggtgcggctg gtcgaggtga cccccagcat cagcaccgtg
     1261 ctcgaggacg acgtgagcgg ggtcagaacc ggcgccgcca ccgacccggg cagacgtccg
     1321 ggaatctccg cgagccgttc cgcgatgagc tggcgggcct ggcgaaggtc ggtgccctct
     1381 ttgagcaccg cggtgatgac cgacaacccc tgaatggact gcgagcgcag cgccgccagc
     1441 ccgttcacgc cgttgatggc gtcttcgatc ggcttggtga ccagtacctc gacctgttcc
     1501 ggcgagaagc cgggggcttc ggtctggatg gatacctgcg ggggagcgaa ttcgggaaag
     1561 acgtccagct tggcccgggc aacgatcgag agaccgtacg ccaccagcgt caccgccagc
     1621 ccggcgacga ttcccggacg tctgacggca aagcggacga tcgaggtgag cactactccc
     1681 cgacctcttc gccaacgacg atccgggcgc ggaattcctc ggagagaagc tgcccggctc
     1741 cccgggtgac aacgcggtcg ccggcagaga agccgctgct ggcgagccac ccgtcctgca
     1801 ccggatgctc ggtaggtact cgaacccgaa cgaagcgtcc cggctcccgc tccacgtacg
     1861 cccacgcgag ggcatcccac tgcaccacgg cagccgatgg gatcagcacc ccgcgggagg
     1921 acgaccggga atcagcgacc caggcggaga cgttcgcgcc gggtcgcata cccttccaac
     1981 cgccgctaac ccgatagagc caggcgggct cacgagtgat gggatcggct tcgggcgccg
     2041 gacccaccag cgcgccacgt acccgcgcgc gaggcgcgcg ggcggcggag aattcgaggg
     2101 cagatggtgg ctctccagcg gtcccggtcc aggtgacctg cacgagcgga gcatcgtacc
     2161 gcgtcagctc cagcagatcc tgccccgcct gcaccagctc gccgggctgc accagcaccc
     2221 gcgagacggt ccccccgcgc gccaccatga cgggacgagc gtctccaatg accgcgaggc
     2281 tctctccgct ctcgagatgg ctgccaaacc ggggccaggc gacgccatcg agccgcgaga
     2341 gccggccggc caccccggcc cgcacgaagg acgtggcttc ggggtcggcc acgatcgtgg
     2401 ccgggagctc cgtctcgggt ccgcgggagg cgccccgcag tggggaggct tcgatgccaa
     2461 tccgggccac ggtggcggaa tcgagggtga ccccgacctc gcccttctct tccaccacat
     2521 gcgaaggctc ggcgctctgc gagttcgccg cgctctcctt cgccgtgttc ccagctcctt
     2581 tcggcccact gcatccgagc ccggttgcaa gcaggagggc ggcacgccag ttcattcggt
     2641 cctctttctc ggccaatcgc cgtcctgacg gagcccccag gctcccaccg cgcgctccaa
     2701 ccccgcaccg gcatcccact gccgcaggcg cgactcgaga ccaagccgtc gggcccggag
     2761 aacctcgagt gaagcgacca gcacctcgag tcgcccgact tcgccgcgat tccacgccgc
     2821 cgcaagcagc gcgtgacgcc gctccgcttc ggtggtgagc gagtcgacgg cggtcacctc
     2881 gcgggcggag agctggcact gcgccagtgc cgcgtcgacc tcctccagca cccgttcctg
     2941 ttcctgcatc agccggcttc ccgcgagctc ccgtcgagca ccggcctccc ggatggggcc
     3001 acgattccgg ttgaggctga gcgacgggaa tcccagcccg agcgtgaact tgccggtccc
     3061 ctggtcgaag aagatgccgg ggccgagggt caggtcgggc gcggcattgg cgacctcgag
     3121 ccggaggtcg ccttcggcga cttgatactc ggcg
//
LOCUS       DATIFF010000148         5485 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_483388, whole genome shotgun sequence.
ACCESSION   DATIFF010000148 DATIFF010000000
VERSION     DATIFF010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5485
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_483388"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..537
                     /locus_tag="VLD58_02250"
     CDS             <1..537
                     /locus_tag="VLD58_02250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53141.1"
                     /translation="PPSTSPQAVILTPEVSPEREKPAPAKPQPRSTPAPTLDTRADPP
                     PPVSASPSFRSVAPGEASHRLGGALRTLRGLEFDHIEVGPAAAVPGAIPGLSVVRVVY
                     RTPEGGRMLLDQQLINPDSSGFRPLEDPSLENGQTAFGTAPNGVSVATWLDEQGYRLS
                     LVAQAPLDSMKILVGLVH"
     gene            708..1241
                     /locus_tag="VLD58_02255"
     CDS             708..1241
                     /locus_tag="VLD58_02255"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HSB53142.1"
                     /translation="MKRIVSVVLAAGGALLLSAATAQAQVSIGVGGGLSIPTGTLKDG
                     VKTGWNALANVGYDLPSGIGVRGDFYYAQHKFKGGVDAKFKFAGGLGNILYNFKSAGT
                     IHPYILGSVGFMNAKTDVSGAPSETKIAFGGGAGLKFKAGTDASIFAEGRYITVNTSG
                     DNANFIPITVGVSFGLK"
     gene            complement(1255..2508)
                     /locus_tag="VLD58_02260"
     CDS             complement(1255..2508)
                     /locus_tag="VLD58_02260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacetone oxidase family FAD-binding enzyme"
                     /protein_id="HSB53143.1"
                     /translation="MSSVQLPIVVVGAGAAGLMAAIFAAEGGEPVMVLEGKEDGGRKI
                     LISGGGRCNVLPSELAPARFHSESAPHLVRRLLQAWPLTGQRRFFEEELGLALALEPE
                     TGKLFPVSNKARDVRDRLIDAARKRGVQFRFNQKVRDLVPSEGTWEITVDGAPVRARC
                     VILATGGLSVPATGSDGAGLAIARRLGHQVRDTYPALTPLTADPPVHAALSGLSLTVT
                     ISAKVAGKKVSTTGGMLFTHRGYSGPAVLDISHVAVRSKLAGTRAELLVNWTGRKAEE
                     WDQRLQERSARAVSSVVREQLPARLADRLLEECGVSLTCQLAQLPRAQRRGLIERLTA
                     YPLPWTGDEGYKKAEVTGGGVALEEVHPDTLESRRHPGLYFCGEILDAFGPIGGYNFA
                     WAWATGRTAGLGAQKKKAGPKARLS"
     gene            complement(2734..3246)
                     /locus_tag="VLD58_02265"
     CDS             complement(2734..3246)
                     /locus_tag="VLD58_02265"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HSB53144.1"
                     /translation="MRDSRTANLLGALVLALHDEMEAATTAAAEHGAAYPAALATILG
                     APGLTIEALRQILGLSHSGTVRLLDALEAEGSVVRKSGKDARSVAVELTASGRRQAQA
                     VLRARETALGPALESLSAAERGQLLRLTEKLLASLTRNPQHADTICRLCDLGACPEDS
                     CPVECAARGT"
     gene            complement(3296..3799)
                     /locus_tag="VLD58_02270"
     CDS             complement(3296..3799)
                     /locus_tag="VLD58_02270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53145.1"
                     /translation="MRFRFTLLLPLLIPAVAAAQKAPPKFGCPTAVYRQFDFWVGDWD
                     VTVNGAPAGRNNITLEEQGCLIHEHWTGSKGGTGQSLNYYDAATQRWNQVWVDNSGTS
                     LRLSGTFADGKMLFTGVAPGPNGETLQQRLTFTRNPDGTVRQLWETSADGATWTVAFD
                     GLYRRRS"
     gene            3922..>5485
                     /locus_tag="VLD58_02275"
     CDS             3922..>5485
                     /locus_tag="VLD58_02275"
                     /inference="COORDINATES: protein motif:HMM:NF015168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HSB53146.1"
                     /translation="MQNRLVGAASAYLRSASHQPIHWFSWGPEAFAAAAAEDRPVLLD
                     IGAVWCHWCHVMDGESYEDPALAAFLNQNFVCIKVDRDERPDVDVRYQRAVQAMTGQG
                     GWPLTAFLLPDGQVFYGGTYFPPDGKYGRPGFRSVLEQVLKVWRTQRDRVKQQAGAVQ
                     RVLTEQLDEAVPGQASAGLLQAATERMASLFDFQHGGFGTQPKFPHPAAVLFLLTRWH
                     DTGESALAEMVERTLDGMARGGMHDQLAGGFHRYSVDARWIVPHFEKMSYDNAELLRA
                     YAEGYAALGHERWAGVARGIIGWIREVLADPDGGYGASQDADVGLEDDGDYFTWTLEE
                     ATEAIGAGEALDVTAAYYDIGTAGEMQHHPAKNVLFVAESLEAIAARMKLAPGRAAEL
                     LQFGQERLRAARAGRATPFIDRTRYTNWNGMLAGALLRAGSILGDSWAVEHALKTLKR
                     IRQEHPEPAALSHSPGGLTGLLDDQVQVALAALEAYETTGALEWLNWSEALLERVWQD
                     YLDPRDGGLFDTA"
BASE COUNT          862 a         1894 c         1843 g          886 t
ORIGIN      
        1 ccccccagta cttcacccca ggccgtgatc ctgacaccgg aggtcagccc ggaacgggag
       61 aagcccgcgc ctgccaagcc gcagccccgg tccactcccg cgcctacgct cgatacccgg
      121 gccgatcctc cgcctccggt cagtgcctcg ccgagcttcc ggagcgtcgc accgggcgag
      181 gcgtcgcacc ggctcggcgg agcgctccgc acccttcgag gtctcgaatt cgatcacatc
      241 gaagtcgggc cggcggccgc ggttcccgga gcaatcccgg gcctatcggt cgtgcgggtg
      301 gtctaccgca ccccggaggg cggtcgcatg ctgctcgatc agcagctcat caacccggac
      361 agctccggat tccggcccct cgaggatccc tccctggaga atgggcagac cgctttcggc
      421 accgcgccca acggcgtctc cgtcgccacc tggctggatg agcagggcta ccgcctgtcg
      481 ctggtggctc aggcgccgct cgactcgatg aagatcctgg taggtctcgt ccactagcct
      541 cacccgtccc gccgttcaag cctcaggtcc ctgagaaact acaggtgtcg gagttcaccg
      601 ttttcctttc ggtttgcgga gggggccacg ttatattctg cccgtcccgg tgcggggccc
      661 tgggtggctc tgcgcacctt ccgggctgaa ctctcaagga gtgtgttatg aagcggatcg
      721 tttctgtcgt tctcgcggcc ggtggcgccc tgctcctctc agccgccacg gcgcaggctc
      781 aggtgtccat cggcgtcggc ggtggcctct ctatcccgac tgggaccctc aaggacggcg
      841 taaagacggg ctggaacgcc ctcgccaacg tcggctacga ccttccctcc ggcatcgggg
      901 tccggggcga tttttactac gctcagcaca agttcaaggg cggagtggac gccaagttca
      961 agttcgctgg cggcctcggc aacatcctgt acaacttcaa gagcgccggg accatccatc
     1021 cgtacatcct gggtagcgtg ggcttcatga acgccaagac cgatgtctcg ggcgctccct
     1081 ctgagaccaa gatcgcgttc ggtggcggcg cgggcctcaa gttcaaggct ggcaccgatg
     1141 ccagcatctt cgcggaaggc cgctacatca ccgtcaacac cagcggcgac aacgcgaact
     1201 tcattccgat caccgtcggc gtgagcttcg gcctcaagta agctccagca ggtgttacga
     1261 aaggcgggcc ttcgggcccg cctttttctt ttgggccccc agccccgcgg tccgtcctgt
     1321 cgcccaggcc caggcgaagt tgtatccgcc gatcggcccg aaggcatcga ggatttcgcc
     1381 gcagaagtac aggccggggt gccgcctgct ctcgagggtg tccgggtgga cctcctcgag
     1441 cgccacaccg ccaccggtca cttccgcctt cttgtagccc tcgtcgccgg tccatgggag
     1501 cgggtacgcc gtcagccgct cgatcaggcc gcggcgttgt gcacgcggca gttgggccag
     1561 ctggcaggtg agtgacacgc cgcattcctc gagcagtcgg tcggccagac gcgctggcag
     1621 ctgttctctg accacactgg agaccgcacg ggcgctccgc tcctggagcc tctggtccca
     1681 ctcctcggcc ttgcgtccgg tccagttcac cagcagttca gccctggttc ccgccagctt
     1741 cgaccgcacc gcaacatggg agatgtcgag caccgccggt ccgctgtagc ctcgatgggt
     1801 gaagagcatg ccgcccgtgg tcgacacctt cttgcccgcc accttcgccg agatcgtgac
     1861 ggtaagcgac agtccgctca aggccgcatg caccggtgga tcggcggtga gaggagtgag
     1921 cgcgggatag gtgtcgcgga cctgatgccc gagccggcgg gcaatggcga gaccggcgcc
     1981 gtcgctgccg gtcgcgggaa cggagagtcc cccggtggcc aggatgacac accgggcccg
     2041 aactggcgct ccgtccaccg tgatctccca ggttccttct gagggaacca ggtcacgcac
     2101 cttctgattg aaccggaact ggaccccacg cttcctggcg gcatcgatca accggtcccg
     2161 gacatcgcgg gccttgttgc tcacggggaa gagcttgccc gtttcgggct cgagcgcgag
     2221 agccaggccg agttcctctt cgaagaagcg tcgctgtccg gtgagtggcc aggcctggag
     2281 caggcgccgc acgagatggg gcgccgattc gctgtggaag cgggcagggg caagctcgct
     2341 gggcagcacg ttgcagcggc cgccgccgct gatcaggatc ttccgtcctc catcttcttt
     2401 cccctccagc accatcaccg gttcgccgcc ctccgcggcg aagatcgcgg ccatcagtcc
     2461 ggcggcgccg gcaccgacga ccacgatggg gagctggact gaagacactc gaggatccgg
     2521 gagttggggt cgggcggaat atcgctccgc cccgggccag gcgcagcgcg gacccggcgc
     2581 caccaggagc gggagaatcc ggcctccggg gcggggccgc gttcgtcccc cgccggctcg
     2641 cgatcgcgct ggcggagcgc ggcctcatcc cgcagcgccg cgcgcatgat atataagtat
     2701 gcggcataca tataatacct cccccaaaga agctcaggtc ccccgcgcgg cgcactccac
     2761 cgggcagctg tcctcgggac aggcgcccag gtcacagagc cggcagatgg tatcggcgtg
     2821 ctggggattg cgggtgagac tggcgagcag cttttccgtg agccggagga gctggccccg
     2881 ctccgccgcg ctcaggctct cgagcgcggg tcccagagca gtctcccggg cgcggagcac
     2941 cgcctgcgcc tggcgccggc ctgaggcggt gagctccacc gctaccgagc gggcgtcctt
     3001 gccgctcttc cggaccaccg agccttcggc ctccagcgcg tcgagcagcc ggaccgtccc
     3061 gctatgggag aggcccagga tctgccgcaa cgcctcgatc gtgaggccgg gggctcccag
     3121 tatcgtcgcc agggcggccg ggtaggcagc accatgctcg gcggccgcgg tcgtggcagc
     3181 ctccatttcg tcatgaaggg ccaggaccag ggcgccgagc agattggccg tgcgtgagtc
     3241 gcgcatagct ccaatatatg cgctagtcac atattggcaa cagcgggggc tgagactagg
     3301 agcggcgccg gtagagcccg tcgaatgcca ccgtccaggt ggcgccatcg gccgaggtct
     3361 cccagagctg gcgcacggtt ccgtcgggat tgcgggtgaa ggtgagccgc tgctggaggg
     3421 tctccccgtt ggggccgggg gcaaccccgg tgaacagcat cttcccgtcg gcaaaggtgc
     3481 cgctgagccg gagcgaggtg ccgctgttgt cgacccagac ctgattccag cgctgggtgg
     3541 cggcgtcgta gtagttcaag ctctgtccgg tgccaccctt ggagccggtc caatgctcgt
     3601 ggatcaggca gccctgctcc tccagggtga tgttgttccg gccggctggc gccccgttta
     3661 ccgtcacgtc ccagtcgccc acccagaaat cgaactggcg atagaccgcg gtgggacaac
     3721 cgaacttggg cggcgccttc tgggcagccg cgactgccgg gatcagcagc ggaagcagca
     3781 aggtgaaacg gaaccgcatg gggcggacgc tcctggaggg tggtaggggg cgtaacggac
     3841 gccgcgcacc ccgggtgtca gaaagcgcaa tcggctgcca gttcgagtgc gtcccggccg
     3901 cggtagctct accttcaggg catgcagaac cgtctcgtcg gcgccgccag cgcctatctc
     3961 cgatccgcgt cgcatcagcc gattcactgg ttcagctggg gtcccgaagc cttcgcggcc
     4021 gcggccgcgg aagaccgccc ggtgctgctc gacatcggcg cggtgtggtg ccattggtgc
     4081 catgtcatgg atggcgagtc ctacgaggat ccggcgctcg ccgcattcct caatcagaac
     4141 ttcgtctgca tcaaggtcga ccgggacgaa cggcccgatg tcgacgtacg ctatcagcgc
     4201 gcggtgcagg ccatgaccgg acagggcggc tggcccctca ccgcctttct cctccctgac
     4261 gggcaggtct tctacggtgg cacctacttc ccgcccgacg ggaagtacgg ccggccggga
     4321 ttccgctcgg tcctggaaca ggtgctcaag gtctggcgca cccagcgcga ccgggtgaag
     4381 cagcaggccg gtgcggtaca gcgggtgctc accgagcagc tggatgaggc agtgcccggc
     4441 caggcgagcg ctggcctgct ccaggcggcc accgaacgga tggcctcgct cttcgatttc
     4501 cagcacggcg gcttcggcac tcagcccaag ttcccccatc cggccgcggt gctcttcctg
     4561 ctgacccgct ggcacgacac cggggagtcc gccctggccg agatggtcga gcgcaccctc
     4621 gacgggatgg cgcggggcgg gatgcacgac cagctggccg gcggctttca ccgctacagc
     4681 gtcgacgccc ggtggatcgt gccccacttc gagaagatgt cctacgacaa cgccgagctg
     4741 ctgcgggcct atgccgaagg ctacgcggcg ctcgggcacg agcgctgggc cggcgtggcg
     4801 cggggcatca tcggatggat ccgggaggtg ctggccgacc ccgacggcgg ttacggcgcc
     4861 agccaggacg ccgacgtggg tctggaagac gacggtgact acttcacctg gaccctggag
     4921 gaagccaccg aggccatcgg cgccggcgag gcgctcgacg tcaccgcggc gtactatgac
     4981 atcggcaccg cgggagagat gcagcatcac cccgcgaaga acgtgctctt cgtggccgaa
     5041 tcgctggagg cgatcgcggc ccggatgaag ctcgcgcccg ggcgcgcggc cgagctgctg
     5101 caattcggcc aggagcggct ccgggccgct cgcgccggcc gcgcaacgcc gttcatcgac
     5161 cggacccgct acaccaactg gaacggcatg ctggccggag cgctcctccg ggccggctcc
     5221 atcctcggcg acagctgggc ggtggagcac gcgctcaaga cactcaaacg gatccggcag
     5281 gagcacccgg agcccgcggc gctcagtcac agccccggcg gactcaccgg cctgctcgac
     5341 gaccaggtgc aggtggcgct cgcggcgctc gaggcgtacg aaacgaccgg cgccctcgag
     5401 tggctcaact ggagtgaggc actgctcgag cgggtgtggc aggactacct cgatccccgt
     5461 gacggcggac tcttcgatac cgcta
//
LOCUS       DATIFF010000149         1011 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_329545, whole genome shotgun sequence.
ACCESSION   DATIFF010000149 DATIFF010000000
VERSION     DATIFF010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_329545"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            349..885
                     /locus_tag="VLD58_02280"
     CDS             349..885
                     /locus_tag="VLD58_02280"
                     /inference="COORDINATES: protein motif:HMM:NF042524.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Chromate resistance protein ChrB"
                     /protein_id="HSB53147.1"
                     /translation="MATDWLLCSYRLPREPTRLRLAIWRRAKRLGALLLHDTFWVLPA
                     DAKTREDFDWLAEEIEERGGSVMVWEARSATGLQDGEVIQRFRTDADQRYADLARAAA
                     RLLKTATRRSLSPARLESARQQFRLLERTLRLERRRDYFRAPGRRSAEAALRTAAIAL
                     GIGTRSTTSTGRGHAVGD"
BASE COUNT          149 a          350 c          359 g          153 t
ORIGIN      
        1 gtggcggcgt gttccagccg ctgcaggatc ccgggtattt cgctctggtc gctgtcgacg
       61 ccgaggcggg gacgatcgtc tggccgaacg gtgcggacct cgatccggac gtgctctatg
      121 agacggcgca cggcgcggag acagggtcgg ggcgcacacc ggaaaagtaa gaaccggcga
      181 ggccgctgga gtgctgatag cccccatcgc gaaggcggtg ggggctttcc cgtatctcag
      241 gacggcgacg gcgagggagt ccttggtgat gcattcggcc ggtgcccggt gcggggacgc
      301 cgacgcgcac tggcgagtcg atgtaaccgc ggttacactg tggtccagat ggccacggac
      361 tggcttctct gctcctaccg gctcccccgg gaaccgaccc gactccgcct cgcgatctgg
      421 cgccgggcga agcgcctggg tgcgctcctc ctccacgata ccttctgggt cctccccgcc
      481 gacgccaaga cccgtgagga cttcgactgg ctggcggaag agatcgagga acgcggggga
      541 agtgtcatgg tgtgggaggc ccgaagcgcc accggcctcc aggatgggga ggtcatccag
      601 cgctttcgga ccgacgccga ccagcgttac gccgacctgg cacgcgctgc cgccaggctc
      661 ctcaagaccg ccacccgccg ctccctctcc cccgcgcggc tggaatcggc gcggcagcaa
      721 ttccggctgc tcgaacgcac gctccggctg gagcgcaggc gcgactactt ccgggcaccc
      781 ggtcggcgat ccgccgaggc cgccctccgc accgccgcga tcgcgctggg gatcggaacc
      841 aggagtacca cgtcaaccgg gaggggccat gctgtgggtg actaggccac gctgtcacgt
      901 cgaccggacc gcctgcgcct ggctgatccg ccggttcgtg gatcgcgacg ccacgtttgc
      961 cttcgcgccc gatccggcgg gggccaggcg gcttggcggg accccgttcg a
//
LOCUS       DATIFF010000150         1042 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_637272, whole genome shotgun sequence.
ACCESSION   DATIFF010000150 DATIFF010000000
VERSION     DATIFF010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1042
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_637272"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..653)
                     /locus_tag="VLD58_02285"
     CDS             complement(<1..653)
                     /locus_tag="VLD58_02285"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894702.1"
                     /note="One of the components of the high-affinity
                     ATP-driven potassium transport (or KDP) system, which
                     catalyzes the hydrolysis of ATP coupled with the exchange
                     of hydrogen and potassium ions; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit B"
                     /protein_id="HSB53148.1"
                     /translation="MTRPATSLVPPGTTRRALRDSITKLHPRNQLRNPVMFVVLVGSA
                     FTLVLAGAAFRGIGSESPWFILGISAWLWLTVLFANFAEALAEGRGKAQADALRRTRT
                     ALQARRLADPANHLEFEMTLATDLRKGHAVFVPAGEYIPADGEIIEGVASVDESAVTG
                     ESAPVIRESGGDRSAVTGGTRVLSDWLVIRVTVNPGESFLDRMIGLIEAAHRKKTPN"
     gene            complement(657..>1042)
                     /locus_tag="VLD58_02290"
     CDS             complement(657..>1042)
                     /locus_tag="VLD58_02290"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: protein motif:HMM:NF015753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HSB53149.1"
                     /translation="AVMLPAATASIFNPGAHGFTEVLYNFSSASNNNGSAFGGMNANV
                     PFYNVALGIAMFIGRFWIIVPTLAIAGSLAAKKSVPPGLGTLPTHTPLFVALLIGTVL
                     LVGALAHLPGLALGPIVEHLMLLGR"
BASE COUNT          166 a          353 c          368 g          155 t
ORIGIN      
        1 tcgttgggcg tcttcttccg gtgcgccgcc tcgatgaggc cgatcattcg gtcaaggaac
       61 gactcgccgg ggttgaccgt tacccggatc acgagccagt cggacagcac acgggtgccg
      121 ccagtcacgg cgctccggtc cccgccgctc tcgcggatga cgggagcgct ctcgccggtc
      181 acggcgctct cgtccaccga ggccacgccc tcgatgatct cgccgtccgc cgggatgtac
      241 tcgcccgccg gaacgaacac ggcgtggcct tttcggaggt cggtggcgag ggtcatctcg
      301 aattcgaggt gattggccgg gtcggccagg cgcctggcct gcagcgcggt ccgggtccga
      361 cgcagggcgt ccgcctgcgc cttgccccgc ccttccgcca gcgcctcggc gaagttcgcg
      421 aagagcaccg tgagccagag ccaggcgctg atcccgagga tgaaccaggg gctctcgctc
      481 ccgatgcccc ggaaggcggc cccggccagc accagcgtga aggcgctgcc caccagcacc
      541 acgaacatca ccgggttccg gagctggttc cgcggatgaa gcttggtaat tgaatcacgg
      601 agcgctcgcc gagtggtccc gggcggcacg agggaggtcg ctgggcgggt catggctcag
      661 cgtcccagca gcatgaggtg ttcgacgatc ggcccgaggg ccagccccgg caggtgcgcc
      721 agcgcgccga cgaggaggac cgtgccgatc agcagggcca cgaacagcgg ggtgtgcgtc
      781 ggcagcgtgc cgagccccgg cggcaccgac ttcttggccg ccagcgaccc cgcgatggcc
      841 agtgtcggca cgatgatcca gaagcggccg atgaacatcg cgatgcccag cgccacgttg
      901 tagaacggga cgttggcgtt catgccgccg aaggcgctgc cgttgttgtt cgaggcggac
      961 gagaagttgt acagcacctc cgtgaagccg tgcgcgcccg gattgaagat cgacgccgtg
     1021 gcggctggca acatgaccgc ga
//
LOCUS       DATIFF010000151         2806 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_945096, whole genome shotgun sequence.
ACCESSION   DATIFF010000151 DATIFF010000000
VERSION     DATIFF010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2806
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_945096"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            220..768
                     /locus_tag="VLD58_02295"
     CDS             220..768
                     /locus_tag="VLD58_02295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53150.1"
                     /translation="MPQQTAWLVTVILVAILAAIFLRIVSTASSSSEYEPIARRATSW
                     RPRLFWLLALFTVVVLAFTLRRLPYSRGDGGAPPQIVRIIGSQWAWQLSHDTVQSGQP
                     VEFQVTSADVNHGFGIYDAHMRLLAQVQAMPKYTNTLRYTFTAPGRYAILCLEYCGMV
                     HHYMRTELIVSGAPAAVTGGGQ"
     gene            765..2213
                     /locus_tag="VLD58_02300"
     CDS             765..2213
                     /locus_tag="VLD58_02300"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HSB53151.1"
                     /translation="MSAASVTPIDAGGRRAVVTYLTAFLLVLVLMALLGVLMRAVQGG
                     DVPLAPRLFYEVMTAHGISMVGIAGLGGAAVMWYYLRRYVELSRGVLWFNLGCFLLGA
                     VLLLAGIFLGGYATGWTFLYPLPVHSNGQWGNGAAALYLGGLLLIGVGFLVFYIDTGR
                     AILGRYGLSRALGWPQLFGRSTEEAPPTTVVASTVVTVVNGLALLAGATIIVLELVAA
                     LSPGFSVDPLIAKNLTYFFGHVFINASIYMSVVGLYEMLARETKRPWKSSRPFLIAWN
                     ATLVMVLAVYPHHVLMDFVMPRWMLIMGQVVSYTSGFPVLLATAYGTLTIIHRSGIRW
                     TLVSSLLVLSTFAWAAGVIPAILDATIVVNQVMHNTLWVPGHFHFYLVIGQIAMVLAF
                     ALDLTRGSAPAADSGADRLAFWIYAVGGLGLSAVFLYSGHLGIPRRFAVHEQAWMPYA
                     RVGALFGLLAAVGMFWFAVRFFRRMGTALKGS"
     gene            2304..>2806
                     /locus_tag="VLD58_02305"
     CDS             2304..>2806
                     /locus_tag="VLD58_02305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53152.1"
                     /translation="MHRPLYFAGFGYLAVCAALVVRHSSHPRAPAPPPRTAPATVRFD
                     GPADQWFAAIKPFCNQVEVEMAQRRHPAPPTLEGQGYSAACFALGGRLSAARTVIDAL
                     EEKDRYRAAGIVFGVAHPVADAGDDRSAGPIMELVVDYWPTNYMALYHAGMSEYALGR
                     PAPARSHL"
BASE COUNT          368 a          959 c          935 g          544 t
ORIGIN      
        1 ctgagtcgcg agggcgcggc cgtgctgctc accggtatcg gcctgccgga cgaccgcctg
       61 catgcgcccg acgagaagct cgacctgcag cagctctggg acggcatccg agtgttcggc
      121 cgcttctatc agttgatggg agaacgccgg gcctagccgg tctccgctgc gcactccaca
      181 ttagggcctc cgacggcgac cctgcgccct ggaggtccga tgcctcagca gacggcctgg
      241 ctggtgacgg tgattttggt cgccatcctg gcggcgatct tcctgcgaat cgtctccacc
      301 gcctccagca gctcggagta cgagcccatc gccaggcgcg ccaccagctg gcgtccccgg
      361 ctgttctggc tgctcgcgct gttcaccgta gtcgtgctcg ccttcacgct gcgccgcctg
      421 ccgtactccc gcggcgacgg cggcgctccg ccacagatcg ttcggatcat cgggtcgcag
      481 tgggcctggc aactgagcca cgacacggtc cagtccgggc agccggtcga attccaggtg
      541 acgagcgccg atgtgaacca cgggttcggc atctacgacg cgcacatgcg gctcctggcg
      601 caggtccagg cgatgccgaa atacaccaac acactgcgct acaccttcac cgcgccgggc
      661 cgctacgcca tcctctgcct cgagtactgc ggcatggtgc accactacat gcggaccgag
      721 ctgatcgtgt ccggagcgcc ggctgccgtc acgggaggtg gccaatgagc gcggcgagcg
      781 tgaccccgat cgacgccggc ggacggcgcg ctgtcgtgac gtatctgacg gcgttcctgc
      841 tggtcctcgt cctgatggcc ctgctcggcg tgttgatgcg ggcggtgcag ggcggcgatg
      901 tcccgctcgc tccccgactg ttctacgagg tgatgaccgc gcacggcatc agcatggtgg
      961 gcatcgcggg gctgggcggg gcggcggtga tgtggtacta cctgcgtcgc tacgtggagc
     1021 tgtcgcgcgg cgtgctgtgg ttcaacctcg ggtgcttcct gctgggcgcc gtgctgctgc
     1081 tggcagggat cttcctgggc ggctatgcca ccgggtggac gttcctgtat ccgctgcccg
     1141 ttcattccaa cggccagtgg ggcaacggag cggcggcgct gtacctgggc gggctgctgc
     1201 tcatcggcgt ggggttcctg gtcttctaca tcgacaccgg ccgcgcgatt ctcggccgct
     1261 acggcctgag ccgcgcgctg ggctggccgc agctgttcgg ccgcagcacc gaggaggccc
     1321 cgcccaccac ggtggtcgcg agcaccgtgg tcacggtggt gaacggcctg gccctcctcg
     1381 ccggtgcgac gattatcgtg ctcgagctcg tggccgcgct ctccccggga ttctcggttg
     1441 atccgctgat cgccaagaac ctgacgtatt tcttcgggca cgtgttcatc aatgcatcca
     1501 tctatatgtc cgtggtgggc ctgtacgaga tgctcgcgcg ggagacgaag cgcccgtgga
     1561 aatcctcgcg accgttcctg atcgcctgga atgcgacgct ggtgatggtg ctggcggtct
     1621 acccgcacca cgtcctgatg gacttcgtga tgccgcgctg gatgctgatc atgggacagg
     1681 tggtgtcgta cacgagcggg ttcccggtcc ttcttgccac ggcctacggc accctcacga
     1741 tcatccatcg ctcgggaatt cgctggaccc tcgtgtcctc cctgctggtg ctctcgacct
     1801 tcgcatgggc cgccggcgtc atccccgcca tcctggacgc caccatcgtg gtgaatcagg
     1861 tgatgcacaa tacgctgtgg gtgccgggac actttcattt ctatctggtg atcggccaga
     1921 ttgcgatggt gctcgcgttc gccctcgatc tgacgcgcgg gtcggccccc gccgccgatt
     1981 ccggggcgga tcgtctggcg ttctggatct atgcggtggg cgggctgggt ctgtcagcgg
     2041 tgttcctcta ttccgggcat ctcggcattc cgcgccggtt cgcggtgcac gagcaggcgt
     2101 ggatgccgta cgcccgcgtc ggggccctgt tcggcctcct ggccgccgtg gggatgttct
     2161 ggttcgcagt gcggttcttc cgccgcatgg gcaccgccct gaaaggctcg taagcccccg
     2221 tggggcgagg gcttcccgcc ctcgcccccc cggcgtgact cagtgcacat cggggcagcg
     2281 ggggcgtctc tcatattgct gctatgcacc gccctctcta cttcgccggg ttcggctacc
     2341 tcgccgtttg cgccgctctg gtggtgcgcc attccagcca ccccagagca cccgcgcccc
     2401 cgccccggac cgctccggcg accgtgcggt tcgacggtcc tgccgatcag tggttcgccg
     2461 cgatcaagcc gttctgcaac caagtggaag tggagatggc ccagcgccgg cacccggctc
     2521 caccgacact cgaaggccag gggtacagcg ccgcctgctt tgcgctggga ggcaggttgt
     2581 cggcggcacg cacagtgatc gacgcgctcg aggagaagga tcgctaccgg gccgccggga
     2641 tcgtcttcgg cgtcgcccat cccgtggccg atgccgggga tgaccgctcg gcgggcccga
     2701 tcatggagct ggtcgtcgac tattggccca ccaactatat ggccctgtat cacgccggga
     2761 tgtccgagta tgccttagga cggcccgcgc cggcccgctc gcatct
//
LOCUS       DATIFF010000152         2092 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2022945, whole genome shotgun sequence.
ACCESSION   DATIFF010000152 DATIFF010000000
VERSION     DATIFF010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2022945"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..939)
                     /gene="selD"
                     /locus_tag="VLD58_02310"
                     /pseudo
     CDS             complement(1..939)
                     /gene="selD"
                     /locus_tag="VLD58_02310"
                     /inference="COORDINATES: protein motif:HMM:NF002098.0"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004756 - selenide, water dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0001887 - selenium compound metabolic
                     process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
     gene            complement(1111..1449)
                     /locus_tag="VLD58_02315"
     CDS             complement(1111..1449)
                     /locus_tag="VLD58_02315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53153.1"
                     /translation="MAFTWVVAGWGAVTVLFLAWEEIGRRFRRDTPSNPAIISASIVE
                     ALLLTLFSSLWFASLGSGGWLLLFLLLAALMELPPRLRRRESRQSWKQALGAIARIVV
                     AGGVLRGILG"
     gene            complement(1454..>2092)
                     /locus_tag="VLD58_02320"
     CDS             complement(1454..>2092)
                     /locus_tag="VLD58_02320"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSB53154.1"
                     /translation="EHRAGFFRGWNYFEESWAGLDSASLARVAVALAEARVAIVPTLV
                     LHETFSRLDDPAILASADLKTVPDSQIARWNLPDLKARAGWNDASFAAFRASRPNQDL
                     FLRAFRSAGGRIIAGTDATNQMLAPGWSLHTELELLVNAGLTPEDALQTATLNTAQLL
                     GADSLGLVAPGKLADLVVLRANPLQDIRNTRMIERVMVRGQLYRVDSLRAGL"
BASE COUNT          331 a          723 c          737 g          301 t
ORIGIN      
        1 gccgatgacc gcgcgtgccg gggtccgttc ccgctccagg gctgcaagca gccggtcgag
       61 cgaagcgggc gggacggcca gcaggaggcc gcccgaggtc tgcgcatcgg tggcgagcag
      121 gcgctccggc tccgtgatgt ccgggtccca acgcacggcg gcggccgcct ccaggttccg
      181 gcgggttccg ccgggagcca ctcccgcctg ggcgaactcc cgggcgcgag gaaggatcgg
      241 caaccggtcc agcctgatcc gggcgccgat cccgctggcc tgcagcagat tgccgaggtg
      301 acccagcagc ccgaagccgg tgacgtcggt ggcggcccgc accccggtct ccagcgcggc
      361 tcgcatggca cccgcgttga gcatcgtcat gcaggcgatc gtctgtgcca gatcggcctc
      421 cgcgagcagg tcgcgcttga gagcggtggt gaggatgccc gtgccgagcg gcttggtgag
      481 caccaggatg tctccgggcc tggccccggc gttggtaagc agccgctcgg gatgcgcctc
      541 gccaatggcc acgagcccca cgtgaggctc gagtgcgtca atcgaatgcc cgcccacgat
      601 ggggcagcgg gcctccgagg taatctctgc catcccggcc agcacccggc cgagcaggtc
      661 catgggcagc ttttcgcggg gccagcccac caggctgagg gcgcagagcg gcgtcgcgcc
      721 catcgcgtag agatcgctca gggcattggc cgcggcaatc cgtccccagg cggcggggtc
      781 gtcaacgatg ggtgtgaaaa agtccaccgt gaccaccatg gcgcggtcgt ccgaaatccg
      841 gtagaccgcc gcatcgtccc tggtagcctg gctcacgagg atccgcggat cctcgggcac
      901 cggcacgtga cgcagcacct gcgccagctc ggcgggcccg agcttgcagg ctcaacccgc
      961 gccgtgggag agcgtcgtca gtcgaatacg gggcttctgg tccatcgggt cgtcggacat
     1021 ggtagttccc agttcccagt tcggcgtaat accgtcctgc tcccctgccc ctgctcccct
     1081 gctcccctgc tccgctgctc cgctgctttg ctaccccagt atccccctca gcaccccgcc
     1141 cgcaacgact atccgcgcga tcgcgcccag cgcctgcttc caggattgtc ggctctcccg
     1201 gcgcctgagg cgcgggggca gttccatgag cgccgcgagc aggagaaaca ggagcaacca
     1261 gccaccgctg ccgaggctgg cgaaccacag gctcgagaac agggtcagga gcagggcctc
     1321 gacgatcgag gccgagatga tagcagggtt agagggggtg tcccgccgga accgccggcc
     1381 gatctcttcc caggcgagga agaggacggt caccgctccc cacccggcca caacccaggt
     1441 gaacgccatc acgtcagagg ccggcgcgga gcgagtccac ccggtagagc tgaccccgta
     1501 ccataacgcg ttcgatcatg cgggtgttgc ggatgtcctg gagcgggttg gcccggagga
     1561 caactaggtc ggcgagcttg cccggcgcca ccaggccgag cgagtcggcg cccaggagct
     1621 gggcggtgtt gagcgtggcg gtctggagcg cgtcctccgg ggtgagtccg gcattcacca
     1681 gcagctccag ctcggtgtga aggctccaac ccggcgccag catctgattg gtggcgtcgg
     1741 tacccgcgat gatccgaccg ccggccgagc ggaaggcgcg gaggaagagg tcctggttgg
     1801 gccgggaggc gcggaaggcg gcgaacgagg cgtcgttcca tccggcccgg gccttgagat
     1861 cgggcaggtt ccatcgcgcg atctgggaat cgggcacggt cttgagatcg gcgctggcca
     1921 ggatcgcggg atcgtcgagc cggctgaagg tctcgtgcag caccagggtc ggcacgattg
     1981 ccacccgggc ctctgccagg gcgaccgcca cccgcgcgag cgaagcggaa tcgagcccgg
     2041 cccagctctc ctcgaagtag ttccaaccgc gaaagaaccc cgcccggtgc tc
//
LOCUS       DATIFF010000153         2045 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1560834, whole genome shotgun sequence.
ACCESSION   DATIFF010000153 DATIFF010000000
VERSION     DATIFF010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1560834"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /gene="fabZ"
                     /locus_tag="VLD58_02325"
     CDS             complement(<1..279)
                     /gene="fabZ"
                     /locus_tag="VLD58_02325"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: protein motif:HMM:NF000582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HSB53155.1"
                     /translation="MDAQKILELLPHRYPFLLVDRVLEVQGTQKIVGLKNVTFNEPFF
                     QGHFPGHPVMPGVLIIEAMAQTGGLLLMDQIPDREKKVVYFMGIDAVKF"
     gene            complement(279..1112)
                     /gene="lpxC"
                     /locus_tag="VLD58_02330"
     CDS             complement(279..1112)
                     /gene="lpxC"
                     /locus_tag="VLD58_02330"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: protein motif:HMM:TIGR00325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HSB53156.1"
                     /translation="MRRTVARPAELSGTGLHTGASVRLRVEPARAGTGVRFVRGDLGG
                     REIPAGLAAVTLTDRRTTLRTGAERIDTVEHLLAAVYAAELHDLRILLDGPEVPILDG
                     SFAPFVALLEEAGVTEQEGRVRQLWIDRPLEVEDGTARYEVRPATGLTLDLTLEYAEP
                     VIGRQRVRFDASRETFQREIAPARTFGFLDEVEPLRQRGLLAGASAGCAMVLSPVAVL
                     NTVPRWPDEFARHKLGDLLGDLSLLEARLNLEIVAQRPSHRGNLTCGRALARAARFTE
                     E"
     gene            complement(1084..>2045)
                     /gene="lpxD"
                     /locus_tag="VLD58_02335"
     CDS             complement(1084..>2045)
                     /gene="lpxD"
                     /locus_tag="VLD58_02335"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: protein motif:HMM:NF002060.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HSB53157.1"
                     /translation="RLAPLDRAGPDALSFLVARAYLPEYRRTAAGAVLVAQALAAEAI
                     GQCTRILVARPEDALQRAAELLHPSRHQPHGIDPTARLAPDVEFPADGYLGPYAVIGA
                     GARLGARVVVEAGAWVGEDVVIGDDSVIGPHAVCYPGALLGRRVVLKAGAVVGGPGFR
                     FLSGLDGHRRVPHLGACVLEDDVEIGSGSCVDRGSFEDTVIGAGTKIDNLVQVAHNVR
                     MGKRCLVAGTTGIAGSVRIGDDVVIAGGVGIADHVTVGNRAVLSAKSVVIGPVADGET
                     VGGYPARPHRIFLRAQAALYRLPDVLGRLEKESTGAADRRSPG"
BASE COUNT          339 a          746 c          668 g          292 t
ORIGIN      
        1 gaacttcact gcgtcgatcc ccatgaagta gaccaccttc ttctcccgat cggggatctg
       61 atccatgaga aggagcccgc cggtctgtgc catcgcctcg atgatcagga caccgggcat
      121 caccgggtgt cccgggaagt gcccctggaa gaagggctcg ttgaacgtga cgttcttgag
      181 cccgacgatc ttctgggtgc cttgaacctc gaggacccgg tccaccagga gaaacggata
      241 acggtgcggt aacagctcca ggatcttctg ggcgtccatc attcctccgt gaagcgggct
      301 gcgcgcgcca gggcgcggcc gcaggtgagg ttcccgcgat gactcggccg ttgggccacg
      361 atctcaaggt tgagccgcgc ctccagcaac gacaggtcgc cgagcagatc gcccagcttg
      421 tgacgggcga actcgtcggg ccagcgcggg accgtattga ggaccgccac cggcgagagc
      481 accatggcgc agccggcgct ggcgccagcc agcagaccgc gctgccgcag cggctcgact
      541 tcgtcgagaa acccgaaggt gcgggccggg gcaatctcgc gctgaaaggt ctcacggctc
      601 gcatcaaacc gcacccgctg ccgtccgatc accggctcgg catactccag ggtgaggtcg
      661 agcgtcagcc cggtcgcggg ccggacctca tatcgggcgg tgccatcctc cacctcgagc
      721 ggccggtcga tccagagctg gcggactcgg ccttcctgct ccgtcacccc tgcctcctcg
      781 agcagcgcca cgaatggagc gaacgagcca tcgaggatcg ggacctccgg cccatccaag
      841 aggatgcgca gatcgtgcag ctcggcggcg tacaccgcgg ccagtagatg ctccacggta
      901 tcgatccgtt ccgcaccggt tcgcagcgtc gtacgccggt cggtcagggt cacggccgcc
      961 aggcccgccg gaatctcgcg tccgcccaga tcgccacgca caaaccggac tccggtgcct
     1021 gctcgcgccg gctcgacccg gagccgcacg ctggccccgg tgtggagtcc ggtgccgctg
     1081 agttcagccg ggcgagcgac ggtccgccgc accagtagac tccttctcca gccggccaag
     1141 tacgtcgggc aaccggtaga gcgcggcctg cgccctgagg aatatccggt gtggccgtgc
     1201 cgggtagcct cccaccgtct cgccgtcggc aaccgggcca atcaccacgc tcttggcgct
     1261 cagcacggca cggttcccca ctgtgacgtg gtcggcgatg ccaacacctc cggcaatcac
     1321 tacgtcatcg ccgatccgga cgctgccggc gatccccgtg gtgccggcca ccaggcagcg
     1381 tttccccatg cggacgttgt gcgcgacctg caccaggttg tcgatcttgg ttccggcgcc
     1441 gatgaccgtg tcctcgaacg aaccacgatc cacacagctc cccgagccga tctccacgtc
     1501 atcctccagc acgcaggcgc cgaggtgggg tacccgacga tgcccgtcga ggccggacag
     1561 gaagcggaag ccgggaccac cgaccacggc ccctgccttg agcaccaccc gccgcccgag
     1621 gagcgcccca gggtaacaca ccgcgtgagg gccgatcacg gaatcgtccc cgatcaccac
     1681 gtcctctccc acccatgctc ccgcctccac caccacccgg gccccaagcc tggccccggc
     1741 gccgatcacc gcataggggc cgagatagcc atccgccggg aactcgacat ccggggcaag
     1801 ccgtgccgtc gggtcgatgc catggggctg atggcgggat ggatggagca gctccgccgc
     1861 ccgctggagc gcgtcttcgg ggcgggccac caggatccgg gtgcactggc cgatcgcctc
     1921 ggcggcgagc gcctgggcga cgagcacggc cccggcggcg gtccggcggt actccgggag
     1981 gtaggcgcga gcgacgagga agctgagggc atccggcccc gcccggtcga gcggggccag
     2041 ccggc
//
LOCUS       DATIFF010000154         1202 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1714867, whole genome shotgun sequence.
ACCESSION   DATIFF010000154 DATIFF010000000
VERSION     DATIFF010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1202
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1714867"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..732
                     /locus_tag="VLD58_02340"
     CDS             <1..732
                     /locus_tag="VLD58_02340"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HSB53158.1"
                     /translation="QFPTVWIPDPATRDLRALVTHRMRLVRMRTMVKNGLHAIAMNRR
                     LTLGPSLWSQRGLAQLQNLALSPHTTQRRDESVQLLTWLTARIEALDDRVAAAAQADP
                     GARLLLTHPGVGPLTALTTVVVLGPVARFPDSKHVVSYTGLAPAVHASADTCRLGQIT
                     KQGSPLLRFVLGQAGLIAAHSEVDLKRHYLTLLRRRGRPKAIVAIARKLLVRLYIMLR
                     DQIDYEEFCRRGRTPRGQEGPPVLA"
     gene            complement(1007..>1202)
                     /locus_tag="VLD58_02345"
     CDS             complement(1007..>1202)
                     /locus_tag="VLD58_02345"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HSB53159.1"
                     /translation="PDLPDMFRRCGVYAARILGGTKAAELPLERPAKFELVINLKTAK
                     ALGLTIPPSLLQRADQVIDP"
BASE COUNT          189 a          451 c          372 g          190 t
ORIGIN      
        1 cagttcccga cggtttggat ccccgacccc gcgacccgcg acctgcgcgc gctggtgacc
       61 caccgcatgc gcctggtccg gatgcgcacc atggtgaaga acggcttgca cgccatcgcc
      121 atgaaccgcc gcctcaccct cgggccctcg ctctggtccc agcgcggtct cgcgcagctg
      181 cagaacctgg ccctctcgcc tcataccacc cagcgccgcg atgagagcgt gcagctgctg
      241 acgtggctca cggcgcgtat cgaggccctc gacgatcgcg tcgccgccgc ggcgcaggcg
      301 gatccggggg cccggctcct gctcacccac cccggcgtcg gcccgctgac ggccttgacg
      361 acggtcgtgg tgctcggacc ggtcgcccgc ttcccggata gcaagcacgt cgtcagctac
      421 accggcctgg ccccggccgt ccacgcctcc gccgacacct gccgcctcgg ccagatcacc
      481 aagcagggta gtcccttgct ccgcttcgtc ctgggccagg ccggcttgat cgccgcccac
      541 tcggaagtcg acctcaaacg tcactacctc accctgcttc ggcgccgcgg ccgccccaaa
      601 gccatcgtcg ccattgcccg gaaactcctc gtgcggctct acatcatgct ccgcgatcag
      661 attgactacg aggaattctg ccggcgcggc cggacgccgc gaggacagga ggggccaccg
      721 gtcctcgcct agcctcaccg catcgcctgt cgccaggggg gaagtcccga ggcaggggtt
      781 ccagtgcggg cgtgctcggg gtgattgatg gtccctcatg accggttcac tgattgagac
      841 gcccaccctc gacgatcgta cgatcgccga cgatcgaata cgacatcatg cgccgcgtgc
      901 gcgaatggat ggctggtgga ccaccgccgc acggactgcc ctctccccgg ccaacctcga
      961 gaagcgaggc gcgcagctga ggactgcctt gacgaaaccg ccgttctcat ggatcgatca
     1021 cctgatccgc ccgctgcagg agcgacggcg ggatcgtgag accaagggcc ttggcggtct
     1081 tgaggttgat caccagctcg aacttcgcgg ggcgctccaa cggcaattcg gccgctttgg
     1141 tgccgcctag gatccgagcc gcgtacacgc cgcagcgccg aaacatgtcc ggaaggtccg
     1201 gg
//
LOCUS       DATIFF010000155         1224 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2023077, whole genome shotgun sequence.
ACCESSION   DATIFF010000155 DATIFF010000000
VERSION     DATIFF010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2023077"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            213..299
                     /locus_tag="VLD58_02350"
     tRNA            213..299
                     /locus_tag="VLD58_02350"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:247..249,aa:Ser,seq:cga)
     gene            301..474
                     /locus_tag="VLD58_02355"
     CDS             301..474
                     /locus_tag="VLD58_02355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53160.1"
                     /translation="MTLLLLSSAAFAPNDCILTGLCGVRVFEPGVPAGLMFVALGLVL
                     GGAIGLRRARRRS"
     gene            complement(482..>1224)
                     /locus_tag="VLD58_02360"
     CDS             complement(482..>1224)
                     /locus_tag="VLD58_02360"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HSB53161.1"
                     /translation="GQVGVRHAFGKVDPAPLFNGVRFVPPWSSVERYSTREEQWPSQR
                     EAVEAMDALSGEQMAMKVEVAVRWQIDGHDAPKLFTEIGTEEQIKNVVLNAIRKGVRD
                     GMVQYSINDISKRNAIANSMEFQVDSALLTRPRVGGEPFRIAKITAFYLRNLEPPEQV
                     VAAINNKIAADQQIETEKHKVEVARLQSDQQRFLNQTLTPEALMKQYLEVLHDMRTSN
                     NLVVLVPTEGGAPLLDLAALRKNLTKGQ"
BASE COUNT          158 a          425 c          408 g          233 t
ORIGIN      
        1 cgggagttct tcggcgcgcg gcgtactccc tgaccgaggc gaggctctgc gctggccgac
       61 ttcgtcgatt cttcgcccag gagcgggccg gtggccccgc gttccacacc gccgccagcg
      121 gccggtgtcg ccggacccgg cccggccatg ccggggatgt cccgttcggc ttgtaacaac
      181 tcccgcggcg gcgttacgtt acgcgcgctt caggacaggt gtccgagtgg ctgaaggaac
      241 cggtctcgaa aaccggcata cccgcaaggg tatcgagggt tcgaatccct ccctgtccgt
      301 atgaccctcc tgctgctgag ctcggcggcg ttcgccccca acgactgcat cctcaccgga
      361 ctctgcggtg tccgggtctt cgagcccggc gtccccgccg ggctcatgtt cgtggcgctg
      421 ggcctcgtgc tcggcggcgc gatcggcctg cgccgggccc gccgccggag ctgacccgcc
      481 gctactgacc cttcgtcagg ttcttccgga gcgccgcgag atcgagcagt ggcgcgcctc
      541 cctccgtcgg caccaggacc accaggttgt tcgacgtccg catgtcgtgc agcacctcga
      601 ggtactgctt catcagggcc tcgggggtga gtgtctggtt gagaaagcgc tgctggtccg
      661 actgcagccg ggcgacctcg accttgtgct tctcggtttc gatctgctgg tcggcggcga
      721 tcttgttgtt gatggccgcc acgacctgct cgggcggctc caggttccgc aggtagaagg
      781 cggtgatctt ggcgatccgg aacggctccc cgcccacgcg gggccgggtc aggagggcgc
      841 tgtccacctg gaattccatc gagttggcga tcgcgttgcg cttcgagatg tcgttgatcg
      901 agtactgcac catcccgtcg cgcacgcctt tgcggatggc attgagcacg acgttcttga
      961 tctgttcctc ggtgccgatc tcggtgaaga gcttcggggc gtcgtgcccg tcgatctgcc
     1021 accggacggc cacctccacc ttcatcgcca tctgctcgcc ggagagggcg tccatcgcct
     1081 ccaccgcctc gcgctgggag ggccactgtt cctcccgggt ggagtagcgc tcgaccgacg
     1141 accagggcgg gacgaatcgc acgccgttga agagcggcgc cgggtccacc ttgccgaagg
     1201 catgccgcac gccgacctgg ccgg
//
LOCUS       DATIFF010000156         1408 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_638030, whole genome shotgun sequence.
ACCESSION   DATIFF010000156 DATIFF010000000
VERSION     DATIFF010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1408
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_638030"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1218
                     /locus_tag="VLD58_02365"
     CDS             <1..1218
                     /locus_tag="VLD58_02365"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HSB53162.1"
                     /translation="LADPAKGLPGDTTFATRPYRARLGLDYIGQPSLIAGSSQFGTYV
                     GGGASLYFSDELGNHNLVTGLQVNGGLKDITALVGYQNLSHRLNYGAVIQQVPYLTGA
                     FASGTTTLDGQAVYVEQELTQRQTNRDVQGLLSYPLSEVQRIELTAGYTNISFDAELR
                     TRAFDLATGAQVLDDKQSLPTGKALNLGLASAALVYDNSFFGATGPILGQRYRLEATP
                     TMGSLAFVGVLADYRRYFMPARPFTLAARVLHYGRYGSGGEDARLQPLFLGYSGLVRG
                     YRLGSFDASECHPTAADPGGCPVFDQLLGSRMVVGNLELRFPLLGVLGIGSGYYGALP
                     LDFTLFGDGGLAWDSAHEPELTGGSRQAVFSAGAGLRFNLFGFAVVELNLAHPFQRPD
                     KHWVWELNLQPGF"
BASE COUNT          203 a          510 c          473 g          222 t
ORIGIN      
        1 ctggcggatc cggccaaggg gttgcccggg gacacgacct tcgcgacccg gccctaccgc
       61 gcgcggctgg gtctcgacta catcgggcag ccgtcgttga tcgccggctc gagccagttc
      121 ggtacctacg tcgggggtgg cgcgtcgctg tacttcagcg acgagctcgg caaccacaac
      181 ctggtcaccg gcctgcaggt gaacgggggg ctgaaggaca tcaccgccct ggtcggatat
      241 cagaacctgt cccaccggct gaactacggg gcggtgatcc agcaggtgcc gtacctgacg
      301 ggcgcgttcg cctccgggac cacgacgctc gacggccagg ccgtctacgt cgagcaggag
      361 ctcacgcagc ggcagaccaa ccgggacgtg caggggctgc tctcctatcc gctgagcgag
      421 gtgcagcgga tcgagctgac tgccggctac accaacatct cgttcgacgc ggagctccgc
      481 acgcgcgcct tcgacctggc caccggggcc caggttctgg acgacaagca gagcctgccc
      541 accggcaagg cgctcaacct ggggctcgca tccgcggcgc tggtatacga caactccttc
      601 ttcggcgcca cgggcccgat cctcggccag cgataccggc tcgaggccac gccgacgatg
      661 ggctcgctcg ccttcgtcgg cgtgctggcg gactaccgcc gctacttcat gccggcccgg
      721 ccgttcacgc tggccgcgcg cgtgctgcat tacggacggt acgggtcggg aggcgaggac
      781 gcgcgcctgc agccgctctt tctgggctac tcgggcctgg tgcgcggcta ccgcctgggc
      841 tcgttcgatg cgagcgagtg ccacccgacg gccgccgatc cgggcggatg ccccgtgttc
      901 gaccagctgc tcgggagccg gatggtcgtc ggcaacctcg aactgcgttt tccgctgctg
      961 ggcgtgctgg ggatcggctc gggctactac ggcgccctgc cgctcgactt caccctcttc
     1021 ggcgacgggg gcctggcgtg ggacagcgcc cacgagcccg agctcaccgg cggaagccgc
     1081 caggccgtgt tcagcgccgg cgcgggcctt cggttcaacc tgttcgggtt cgcggtggtc
     1141 gagctgaacc tggcacatcc gttccagcgc cccgacaagc actgggtctg ggagctgaac
     1201 ctccagccgg ggttctgacg cgacggtttg cattcggtcc gcgccgggcc ttcattcccc
     1261 agcatgcacc ccggccgcga ccaccatctc ccgcccgatc ccgacgccta ccggcacgcg
     1321 ccccatccca agggcaggat catcgtcatc gcacccaccc gggcggcgtg cgagaccatc
     1381 gagctggcac tggggctgca cctggaga
//
LOCUS       DATIFF010000157         1256 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_23098, whole genome shotgun sequence.
ACCESSION   DATIFF010000157 DATIFF010000000
VERSION     DATIFF010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1256)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1256)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1256
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23098"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            160..1209
                     /gene="cysK"
                     /locus_tag="VLD58_02370"
     CDS             160..1209
                     /gene="cysK"
                     /locus_tag="VLD58_02370"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: protein motif:HMM:TIGR01136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HSB53163.1"
                     /translation="MGGRHASILETIGNTPVVRINRLAPPSVNLFVKVEAFNPLGSVK
                     DRLAIAVIEAAERSGALKPGQTVIEATSGNTGIGLAMVCAAKGYPLVLVMAETFSIER
                     RRLMRFLGAKVVLTPAAERAVGMIRKMEALAAANGWFMTRQFENEANPDYHSRTTAQE
                     ILADFAGDRLDCWVTGYGTGGTLKGVARVLRKERPETKIVVCEPEEAPLLGSGAAQPR
                     HPDGTPAAPHPSFKPHPMQGWTPDFIPKLTGDAVDLKLVDRVLAIPGPEAIRCAKDLA
                     AREGIFVGITSGGTFAGALEIAAEAERGANILCMLPDTGERYLSTPLFADVPAEMTEE
                     ELSIAQSVPVAAPKT"
BASE COUNT          208 a          422 c          453 g          173 t
ORIGIN      
        1 gggggggcac aaggcggccg ccccgagaag ccgtcgaggg cgacgatccc gtctttcggg
       61 accccaaggg ggcggtccag gtcgggtcga cgcgcgacgc gtcctcatta cacctgtcac
      121 cctgcgcggc ggcttccccg ccgctctacg aggtgcgtca tgggtggacg tcacgcgagc
      181 atcctggaaa cgatcggcaa cactcctgta gtcaggatca acaggctggc tccacccagc
      241 gtgaacctgt tcgtcaaggt cgaagccttc aacccgctcg gctcggtgaa ggaccgcctc
      301 gccatcgccg tgatcgaggc ggcggagcgt tcgggagctc tgaagccggg ccagaccgtc
      361 atcgaggcga ccagcggcaa caccggcatc ggcctggcca tggtctgcgc ggccaagggc
      421 tatccgctgg tgctcgtcat ggccgagacg ttcagcatcg agcggcgccg gctgatgcgg
      481 ttcctggggg cgaaggtggt gctcaccccg gcggcggagc gcgccgtggg catgatcagg
      541 aagatggagg cgctggcggc ggcgaatggc tggttcatga cgcgccagtt cgagaacgag
      601 gccaaccccg actatcactc gcgcacgacg gcgcaggaga tcctggcgga cttcgcgggc
      661 gaccggctcg actgctgggt aaccggctac ggcaccggcg ggacgctcaa gggcgtggcc
      721 cgggtgctcc gcaaggaacg gccggaaacc aagatcgtgg tctgcgagcc ggaggaggcg
      781 ccgctcctgg gcagcggtgc cgcgcagcca cgccatccgg acggcactcc ggccgcaccg
      841 cacccgagct tcaagccgca cccgatgcag ggctggacac cggacttcat ccccaagctg
      901 accggggacg ccgtcgacct gaagctggtg gaccgggtcc tggccatccc cggcccggag
      961 gcgatccgct gcgccaagga tctggcggca cgggagggca tcttcgtggg catcacctcg
     1021 ggcggcacgt tcgccggcgc gctcgagatc gccgccgagg cggagcgggg ggccaacatc
     1081 ctctgcatgc tgccggacac cggggagcgc tacctcagca caccgctgtt cgccgacgtg
     1141 ccggccgaga tgacggagga agagctttcc attgcgcagt cggtgcctgt cgcggcgccg
     1201 aagacgtgag gccggttgga ccatcggctc gcacagagcg gtctcggcac ccgaga
//
LOCUS       DATIFF010000158         1110 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_638082, whole genome shotgun sequence.
ACCESSION   DATIFF010000158 DATIFF010000000
VERSION     DATIFF010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_638082"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..1006
                     /gene="rplB"
                     /locus_tag="VLD58_02375"
     CDS             167..1006
                     /gene="rplB"
                     /locus_tag="VLD58_02375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HSB53164.1"
                     /translation="MSIRQFRPMTAGTRFRSVSGFEEITRDTPEKSLLEPMKKSGGRN
                     NQGHLTSRHRGGGHKRQYRKIDFKRDKFGIPGKVAEIEYDPNRTARIALVVYADGEKR
                     YILHPKGLGQGDSVISGPGSDTRTGNALPLAEVPLGTTVHNIELKIGKGGQLCRTAGS
                     SAQVVAKEGAYVTLRLRSTEMRLVHGRCLATIGEVGNAEHELLSRGKAGKTRWLGRRG
                     KVRGVAKNPVDHPLGGGEGKSSGGRPPVSPWGKPEGVKTRKRKKKSNRLIVRGRKRGK
                     ATQ"
     gene            1006..>1110
                     /locus_tag="VLD58_02380"
     CDS             1006..>1110
                     /locus_tag="VLD58_02380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006823225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S19 family protein"
                     /protein_id="HSB53165.1"
                     /translation="MARSVKKGPFIQEALLTKVQILNSKNEKRVVKTWS"
BASE COUNT          212 a          367 c          401 g          130 t
ORIGIN      
        1 caggagctgg agcggcagtt cggcgtgcac gtgaccgcgg tgcgcaccat gcagatgcgc
       61 cggcatgagg tcacccgggg ccggattcgc ggcgccaccg cgcgctggaa gaaggcgatc
      121 gtcaccctca aggaaggcga ctcgatcgcc gtgttcgagg gctgagatga gcatcaggca
      181 attccggccg atgacggccg gcacccgctt ccgctcggtg tccgggttcg aggagatcac
      241 ccgggacact ccggagaagt cgctgctcga gccgatgaag aagtcgggcg gccggaacaa
      301 ccagggccac ctgacctcgc ggcaccgggg cggcgggcac aagcggcagt accggaagat
      361 cgacttcaag cgcgacaagt tcgggatccc cggcaaggtg gccgagatcg agtacgatcc
      421 caaccgcacc gcccggatcg ccctggtggt ctacgccgac ggcgagaagc gctacatcct
      481 ccaccccaag gggctggggc agggggacag cgtgatctcg ggccccggct cggacacccg
      541 gaccggcaac gccctgccgc tggcggaggt cccgctcggc accacggtgc acaacatcga
      601 gctcaagatc ggcaagggcg gccagctctg ccggaccgcc ggctcgagcg cccaggtggt
      661 ggccaaggag ggggcctacg tcaccctccg gctccgctcc accgagatgc gcctggtgca
      721 cggccgctgt ctcgccacca tcggcgaggt gggcaacgcg gagcacgagc tgctctcccg
      781 cggcaaggcc ggcaagaccc gctggctggg ccgccgcggc aaggtccgcg gcgtggccaa
      841 gaacccggtg gatcacccgc tgggcggcgg cgagggcaag agctcgggcg gccggccgcc
      901 ggtgtcgccc tggggcaagc cggagggcgt gaagacccgg aaacggaaga agaagtccaa
      961 ccgtctcatc gtgcgcggcc gcaagcgcgg gaaggcgacg caataatggc acggagcgtc
     1021 aagaagggcc cgttcattca ggaggcactg ctcaccaagg tgcagatcct gaactccaag
     1081 aacgagaagc gtgtggtcaa gacctggagc
//
LOCUS       DATIFF010000159         1756 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_946350, whole genome shotgun sequence.
ACCESSION   DATIFF010000159 DATIFF010000000
VERSION     DATIFF010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_946350"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..361
                     /locus_tag="VLD58_02385"
     CDS             <1..361
                     /locus_tag="VLD58_02385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53166.1"
                     /translation="GATLLVEVPDHEGLTRRAHGSAWAGYHTPRHTAAYTRATLGAML
                     ERAGWRVVRQQRSGTLDPYVLWWLGRQERAGRSLAGSLERAFPGFMAGKLLTLPVALV
                     QRWVRLGVQVAVARRQG"
     gene            481..>1756
                     /locus_tag="VLD58_02390"
     CDS             481..>1756
                     /locus_tag="VLD58_02390"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSB53167.1"
                     /translation="MANPRKIVFSVPALMPDGDGTRRGVAPANQTSVPTETAPAGEVG
                     DVRKLAMLMEVSQALTGTLNLPAGLYGVLEVLERRCGAVRGAVTLLDAESGHLVVEAS
                     LGYPRPVGRVRYRLGEGITGEVAGTGVPAVVPQVSREPRFLGRAADRSERVQETSFLC
                     VPILLDGATAGTLAIELAWQPDREPDRWVKALRIAASMISQALRIQRLIDQERRQLVE
                     ENTQLRQELRERYEFTHLIGNSGPMRRVYEQIAQVVDTGATVLIRGESGTGKELIAHA
                     LHHHSPRAGKPFVRVNCAALPETLVESELFGYERGAFTGAQARRKGRFELADGGTLFL
                     DEIGELSPSTQAKLLRVIQEREFERLGGTATIPVDVRLITATNKDLEAGLSDGSFRED
                     LYYRLNVFAICVPPLRERKSDILQLADHFLEKY"
BASE COUNT          268 a          586 c          637 g          265 t
ORIGIN      
        1 cggcgcgacg ctgctcgtcg aggtccccga ccacgagggg ctgacccgcc gagcccatgg
       61 gtccgcatgg gccggctatc acacaccccg ccacacggct gcctacacgc gcgcgaccct
      121 gggtgcgatg ctcgagcgcg ccgggtggcg ggtcgttcgc cagcagcgct cgggcacgct
      181 cgatccctac gtgctctggt ggctgggccg gcaggagcga gcgggccgct cgttggccgg
      241 atcgctggag cgggccttcc ccggcttcat ggcggggaaa ctgctcaccc tgccggtggc
      301 tctggtgcag cggtgggtgc gcctgggggt tcaggtcgcc gtcgcccggc ggcagggctg
      361 agtcgtattt tcttcaacat ttgcacaacc gtcggcaaag aaccctgaga gcaccacatc
      421 aatctgtatt tccgctcgaa gaaacttgca ttttctgcac gaaacggata acacttagcc
      481 atggcaaatc cacgcaagat cgtcttcagc gtccccgcgc tgatgccgga cggcgacggc
      541 acccgccgtg gcgtcgctcc ggccaaccag acatcggtgc ccaccgagac cgctccggcg
      601 ggcgaggtgg gggacgtgcg caagcttgcc atgctgatgg aggtgagtca ggcgctgacc
      661 ggcacactca atctgccggc cggcctctac ggggtgctgg aggtgctgga gcggcgctgt
      721 ggggcggtgc gtggggcggt gaccctcctc gacgccgaga gcggccacct cgtggtcgag
      781 gcgtcgctgg gttatccccg gccggtaggg cgggtgcggt atcggctggg cgaggggatc
      841 accggggaag tggccgggac gggcgtaccg gcggtggtgc cgcaggtgag ccgggagccc
      901 cgcttcctcg gccgggccgc cgaccggtcg gagcgggtgc aggagaccag cttcctctgc
      961 gtgccgatcc tgctggacgg cgccacggcc ggtaccctgg ccatcgagct ggcctggcag
     1021 cccgaccggg agcccgaccg ctgggtcaag gcactcagga tcgcggcctc gatgatctcc
     1081 caggcgcttc ggatccagcg gctgatcgat caagagcggc gccagctggt ggaggagaac
     1141 acccagctcc gccaggagct ccgggagcgg tacgagttca cccacctgat cggcaacagc
     1201 gggccgatgc ggcgggtcta cgagcagatc gcccaggtgg tggataccgg ggcgacggtg
     1261 ctcatccggg gggagtcggg aaccggcaag gagctgatcg cgcacgcgct gcaccatcac
     1321 tcgccccggg cggggaagcc cttcgtccgg gtcaactgcg ccgcgctgcc ggagacgctg
     1381 gtcgaatccg agctcttcgg ctacgagcgc ggcgccttca ccggcgccca ggcccggcgg
     1441 aagggccgct tcgagctggc cgacggcggc accctgttcc tcgacgagat cggcgagctg
     1501 agcccgtcca cccaggccaa gctgctccgg gtcatccagg agcgggagtt cgagcgcctg
     1561 ggcggcaccg cgacgattcc ggtggatgtc cggctgatca ccgccaccaa caaggacctg
     1621 gaggcggggc tgtcggacgg gagcttccgg gaggacctct actaccggct gaacgtgttc
     1681 gccatctgcg tgccgccgct ccgggagcgg aagtcggaca tcctccaact ggccgaccac
     1741 ttcctggaga agtacg
//
LOCUS       DATIFF010000160         2163 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2177276, whole genome shotgun sequence.
ACCESSION   DATIFF010000160 DATIFF010000000
VERSION     DATIFF010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2163
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2177276"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..616)
                     /gene="otsB"
                     /locus_tag="VLD58_02395"
     CDS             complement(<1..616)
                     /gene="otsB"
                     /locus_tag="VLD58_02395"
                     /EC_number="3.1.3.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004805 - trehalose-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
                     /protein_id="HSB53168.1"
                     /translation="MRNILSRAGREALEEFAWSNVLLGFDFDGTLAPIVPRPDQAVMR
                     PATLTLFRRVIALYPSVVISGRAREDVARRLPGKGLLSILGNHGIEPWQATPDVIETI
                     RRFRPVLDRRVAAFPGVLIEDKTYSLTAHFRRSRTKRAARAAIVAAATDVDGLRVVGG
                     KQVVNILPAGPAHKGTALERERTRAGCDTAIFLGDDDTDEDVFGL"
     gene            complement(613..>2163)
                     /locus_tag="VLD58_02400"
     CDS             complement(613..>2163)
                     /locus_tag="VLD58_02400"
                     /EC_number="2.4.1.15"
                     /inference="COORDINATES: protein motif:HMM:NF013173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003825 - alpha,alpha-trehalose-phosphate
                     synthase (UDP-forming) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-6-phosphate synthase"
                     /protein_id="HSB53169.1"
                     /translation="EAESEAGAWTPQRLKQTLIRHLHGEKIVIMANREPYIHHRNSDG
                     TIVVRHPASGLVSALEPVMRACSGTWIAHGSGSADRDVADAQGRIRVPPGEESYLIRR
                     VWLTPEEEQGYYYGFANEGLWPLCHIAHARPVFRSGDWQQYQAVNRKFVDALCAEVDT
                     EDPVVLVQDYHFALAPRLIHERLPRATILMFWHIPWPNSERFGICPWREEILEGMLGS
                     SILGFHTQAHCNNFIESVDRFLEARIDREASAVVQHGRSSLVRPYPISVEWPNRWAAG
                     APPAEECRREIAAELGLRPDARLGIGVDRLDYTKGVEERLLAVERLLEQHPEFLGRFT
                     FVQLAAPSRTAIEAYQTVNQAVEREAARINQRFGREGYRPIVLKRTHHEPATVFRYYR
                     AADLCYVSSLHDGMNLVAKEFVAAREDERGVLVLSQFTGAARELTEALIVNPYDLDEA
                     SAALRAALTMSAGEQQDRMRSMRRFLGEFNVYRWAGRMLVDAARLRRRDRLTGRLSDH
                     GVAAGAAR"
BASE COUNT          342 a          732 c          766 g          323 t
ORIGIN      
        1 cgagcccgaa gacatcttcg tcggtgtcgt catcgcccag aaagatggcg gtgtcgcagc
       61 cggcccgggt gcgctcccgc tccagcgccg ttcccttgtg ggccggtccg gcgggaagga
      121 tgttgaccac ctgcttgccc cccacgaccc ggagcccgtc gacatcggtc gccgcggcga
      181 caatcgcggc ccgcgccgcg cgcttggtcc ggctccggcg aaaatgcgcg gtgagggaat
      241 aggtcttgtc ctcgatcagc acgccgggaa aggcggcgac acgccggtcg aggaccggac
      301 ggaatcggcg gatcgtctcg atcacgtccg gcgtggcctg ccacggctcg atcccgtggt
      361 tgccgaggat cgacaggagg cccttgccgg ggagccggcg ggcgacgtcc tcccgggccc
      421 ggcccgaaat gaccacggag ggatacaggg cgatcacgcg gcggaagaga gtcagggtcg
      481 ccggccgcat gacggcctgg tcgggcctcg ggacgatggg cgccagggtg ccgtcgaaat
      541 cgaatccgag cagcacgttc gaccaggcga attcctcgag cgcctcccgg ccggcccgcg
      601 acaggatatt cctcaccggg cggcacccgc cgcgaccccg tgatccgaca ggcgaccggt
      661 caggcgatcg cggcggcgca gccgggccgc gtccacgagc atccggccgg cccagcgata
      721 gacgttgaat tccccgagga agcggcgcat cgaccgcatc cggtcctgct gttcaccggc
      781 ggacatggtc agcgcggccc ggagggcggc gctcgcctcg tcgagatcgt agggattgac
      841 gatcagcgcc tcggtcagct cccgggcggc cccggtgaac tggctcagca ccagaacccc
      901 ccgctcgtcc tcccgcgccg ccacgaactc cttggcgacc agattcatgc catcgtggag
      961 gctcgacaca tagcagaggt ccgccgcccg gtagtagcgg aagacggtcg cgggctcatg
     1021 gtgggtccgc ttcaggacaa tcggccggta gccctcccgg ccgaagcgct ggttgatccg
     1081 ggccgcctca cgctcgacag cctgattgac cgtctggtac gcctcgatcg cggtgcggct
     1141 gggggccgcg agctgcacga aggtgaagcg gccgaggaat tcgggatgct gctcgaggag
     1201 acgctccacc gcgaggaggc gctcctcgac gcccttggtg tagtcgagcc ggtccacgcc
     1261 gatgcccagc cgggcgtcgg gtcgcagtcc caactcagcg gcaatttccc ggcggcactc
     1321 ctccgcgggc ggggcaccgg ccgcccagcg attgggccac tccacggaaa tcggataggg
     1381 gcggaccagg ctgctgcgac cgtgctgcac cacggcactg gcctcccggt caatgcgggc
     1441 ctcgagaaac cggtcgacgg actcgatgaa gttgttacag tgggcctggg tgtgaaagcc
     1501 gaggatgctc gagcccagca tgccctcgag aatctcctcc cgccaggggc agatgccgaa
     1561 gcgctccgag ttcggccagg ggatatgcca gaacatgagg atggtggccc gggggaggcg
     1621 ctcatggatc aggcggggtg ccagggcaaa gtggtagtcc tggaccagta ccaccggatc
     1681 ttccgtgtcg acctcggcgc agagcgcgtc gacgaacttc cggttgacgg cctggtactg
     1741 ctgccagtcg ccggatcgga agaccggccg ggcgtgcgcg atgtggcaga gaggccagag
     1801 gccctcgttg gcgaatccgt agtagtagcc ctgctcctct tcgggcgtga gccagaccct
     1861 ccggatgagg taggactcct cgcccggggg cacccggatc cgtccctgcg cgtcggcgac
     1921 gtcccgatcg gccgagccgc tcccgtgggc gatccaggtg cccgagcagg cccgcatgac
     1981 cggctcgagc gcgctcacca ggccgctggc gggatgccgc acgacgatcg taccgtcgga
     2041 gttccggtgg tggatgtagg gctcccggtt cgccatgatc acgatcttct cgccatggag
     2101 atgacggatg agcgtctgct tgaggcgctg cggggtccag gccccggcct ccgattcggc
     2161 ttc
//
LOCUS       DATIFF010000161         1003 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1715636, whole genome shotgun sequence.
ACCESSION   DATIFF010000161 DATIFF010000000
VERSION     DATIFF010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1715636"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..489)
                     /gene="atpH"
                     /locus_tag="VLD58_02405"
     CDS             complement(<1..489)
                     /gene="atpH"
                     /locus_tag="VLD58_02405"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit delta"
                     /protein_id="HSB53170.1"
                     /translation="MRPVTIARNYAEALFALGEKSGKIQEYADLIDAVAHGVAAAPTV
                     QAVLMSPRVTKAEKARLFADALAGAPGEFVRFLQSVIRRGRQGLFTDIAQQFHALHDL
                     KLNRVRAAVTVAHPVDEALRKRIADQLTAVMGRQVLPHFTEDPAILGGVVVKVGDRVF
                     DGS"
     gene            complement(486..>1003)
                     /gene="atpF"
                     /locus_tag="VLD58_02410"
     CDS             complement(486..>1003)
                     /gene="atpF"
                     /locus_tag="VLD58_02410"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HSB53171.1"
                     /translation="EAAHAGPASPFEVNPGLTIWTLVVFIGLMLVLKRFAFPAILKTT
                     EDRERTIARQLEEAEKANREAKSLLEENRKLLAQARTQAQTLVADAKSAADKERTSAI
                     EKTRHEQDELLARARRDIAAERDKALADLRREAVDLSLAAASKLIGQRLDSGADRALV
                     ESYLSSLERTK"
BASE COUNT          134 a          375 c          329 g          165 t
ORIGIN      
        1 cgaaccgtcg aacacccggt cacccacctt cacgacgacg ccgcccagaa tcgcggggtc
       61 ctccgtgaaa tggggcagca cctgccggcc catcacggcc gtgagctggt cggcgatgcg
      121 cttcctcagc gcctcgtcca ccgggtgcgc caccgtcacg gcggcacgga cccggttgag
      181 cttgagatcg tgcagcgcat ggaactgctg ggcgatgtcg gtgaacaacc cctggcgccc
      241 gcgccggatc accgactgga ggaaccggac gaactccccg ggcgcgcccg cgagggcgtc
      301 ggcgaacagc ctggccttct ccgccttggt cacccggggc gacatcagca ccgcctgcac
      361 cgtcggcgcc gcggccaccc catgcgccac ggcgtcgatc aggtcggcgt actcctgaat
      421 cttcccgctc ttctcgccca gggcgaacag cgcctcggcg taattgcggg cgatcgtgac
      481 tggcctcact tggtcctctc cagcgaggag agatagctct ccaccagggc ccggtcggcg
      541 ccgctgtcga gccgctgccc gatcagcttg ctcgcggccg cgagcgagag gtccaccgcc
      601 tcgcggcgga ggtcggccag ggccttgtcc cgctccgcgg cgatgtcgcg ccgggcgcgg
      661 gccagcagct catcctgctc gtgccgggtc ttctcgatag ccgaggtccg ctccttgtcc
      721 gccgccgact tcgcgtcggc caccagcgtc tgcgcctggg tgcgcgcctg cgccagcagc
      781 ttccggttct cctcgaggag cgactttgcc tcccggttgg ccttctcggc ctcctccagc
      841 tgccgggcga tggtccgctc gcggtcttcg gtggtcttga ggatcgccgg gaaggcgaac
      901 ctcttgagca ccagcatgag cccgatgaag accaccagcg tccagatcgt cagcccggga
      961 ttgacctcga acgggctggc gggtccggcg tgggccgcct ctt
//
LOCUS       DATIFF010000162         5126 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2177642, whole genome shotgun sequence.
ACCESSION   DATIFF010000162 DATIFF010000000
VERSION     DATIFF010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5126
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2177642"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            458..871
                     /locus_tag="VLD58_02415"
     CDS             458..871
                     /locus_tag="VLD58_02415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HSB53172.1"
                     /translation="MSGRKGFTLIELLIVVVIIGILAAIAIPKFANTKQKAVKASMLS
                     DLRNLATAQEAFYADSSMYATTYGTTIATGQVNFAPSQKNTLVINSASNASGWAATIS
                     NPGYSAGSCGIFVGSTFSGSGTPAAATQEGVGVCP"
     gene            962..2155
                     /locus_tag="VLD58_02420"
     CDS             962..2155
                     /locus_tag="VLD58_02420"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSB53173.1"
                     /translation="MPRPPRSLRAELLVSLGLVTSSAVILVGLTTVVLAGGDLEETAK
                     PLVILWLGSTVVFVLFGAHVVRRLVMVPLQRLSAEADTLAAGRLDESLAGYETIEFTH
                     LSGRYRAMAESLLDAQSQMVRVEKLAGIGTLAAGVAHEVRNPLGALSAYVDLLSRRGA
                     DPQVTEAMRGAIGRIERTVQSLLTYARPGAAGGAVDLNEAVRTSLDFLGAQGLLKGQA
                     LTLELEPGLPLVRGERHLLEQVVVNLVVNACQAAPQGRLVVGTVRETFEPRHRTALRA
                     RDGWNPTAGAARAGRNGAGSSRPRPDVAPGTPGVMLYVADDGPGVAEGDRERVFDPFY
                     TTKDPGEGTGLGLAIVARTVHDAGGTVWVDRAREGGAVFKVFIPIALMPASEVGEPSY
                     ATAHC"
     gene            2136..3488
                     /locus_tag="VLD58_02425"
     CDS             2136..3488
                     /locus_tag="VLD58_02425"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSB53174.1"
                     /translation="MRLLIVDDDADLRQSLSLLLRETGYDVVAEADPEEALRRATAEE
                     FDLILCDVKMPRMDGLAFLRRYRAERGAALIIMMSAYGTEDAALAAMREGAYDYLRKP
                     FRPDEVIMTVRKAEERERLRREVETLRSSLGADAVRDVVVAESRAMRDLLELASRVAR
                     HSTTVLVTGESGTGKEVLAKAIHRMSPRHDMSFTAINCAAIPEQLLESELFGHTKGAF
                     TGATADRAGLFEGAHQGTLLLDEIGDLPLGLQAKLLRVLEEGEIRRIGGREDKKVDVR
                     VIAATGKALDQAVERGEFRADLYYRLDVVRLHIPPLRERPEDISALLTHFARQAAQRL
                     GHPVSITPQALAMLSQHSWPGNVRELRNAVERAAVLSGGKPLDCVDFSLSNGNGKGGV
                     AALPQNGTYDLRSQVEEVERALIQKALEASKGNRREAAQLLGISLRTLFYKLRRVHAA
                     "
     gene            3714..4178
                     /locus_tag="VLD58_02430"
     CDS             3714..4178
                     /locus_tag="VLD58_02430"
                     /inference="COORDINATES: protein motif:HMM:NF023444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family pseudopilin"
                     /protein_id="HSB53175.1"
                     /translation="MVQRDSRGFTLIETLVVLGVVAVLMLVGWPKVRTALVKANVRGA
                     RSAVINTLQQAKNVAIRDGRRAAVNFSNGAGTMWVTATPRKVAAAGSTSDTVGAVRSL
                     ASLYGVTVNASVGSYTYDNRGLSTSTADATVLIARAGYQDSVLVNAYGRISK"
     gene            4175..4564
                     /locus_tag="VLD58_02435"
     CDS             4175..4564
                     /locus_tag="VLD58_02435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53176.1"
                     /translation="MTPHSSEGGFTVLEIIVAILVLTIGVTSLVGSSALVTRQVGRGR
                     IVTIANEIGRQKLDSLRAIAAKNVGGSRCADAGFASGGPATRRHITYSWTVSGAGTAP
                     HDVTVTVSYPRKGGTSTFTLTTTILCS"
     gene            4567..>5126
                     /locus_tag="VLD58_02440"
     CDS             4567..>5126
                     /locus_tag="VLD58_02440"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HSB53177.1"
                     /translation="MTSRRGFTLVELLVALVLLATVLGATYQLLVNTQRVSRAQSEHV
                     DMQSNMRSGALILASELRAVGFDTVPGAATVSPDILDNQATSVRFRAIRSSGLICAYG
                     SNYFVVDTVRDYAAYRQPTTNDRVMVFADRDTTLSSDDMWVRGRTITSFAAATCPNNT
                     TWNSHAGLRFNVNTFPAPGATTPDSFT"
BASE COUNT          802 a         1735 c         1784 g          805 t
ORIGIN      
        1 gaagaacacg ctggtgatca acagcgcgtc gaacgcgagc gggtgggcgg cgacgatctc
       61 caatccgggg tattcgccgg gctcgtgcgg catcttcgtg ggctcgacct tctcggggtc
      121 ggggaccccg gcggcggcca cccaggaagg catcggggtc tgcccgtaag ctcggcgcga
      181 gggttcgcgg cgtagcggtg tgcaggggcg gaagcatttc cgcccctgct gcctttttcg
      241 gggatggggc caagcccgga gtcttgcaat tttcggcttc tcgccgcgga atcgggatgc
      301 gcatccgttg gcagcatctc cgttaagtag atggcgtcaa ccgcgttgtc tccaccggac
      361 ccaccacggc atatgtgttg cccctctgac tcgtccggaa ctggctcagc gccccagctg
      421 ccatccttca ctgatgtcca actcctgcgg aggtttcatg tcgggtcgta agggcttcac
      481 cctgatcgag cttctgatcg tggtcgtgat catcggcatt ctggccgcga ttgcgattcc
      541 gaagttcgcc aacaccaagc agaaggcggt caaggccagc atgctctccg acctgcggaa
      601 cctggccacg gcgcaggagg cgttctacgc cgactcctcc atgtacgcga cgacctatgg
      661 caccacgatc gcgacggggc aggtgaactt cgcgcccagc cagaagaaca cgctggtgat
      721 caacagcgcg tcgaacgcga gcgggtgggc ggcaacgatt tccaatccgg gctactcagc
      781 cggctcgtgc ggcatcttcg tgggctcgac cttctcgggg tcggggaccc cggcggcggc
      841 cacccaggag ggtgtcggag tctgcccgta agagggattg tgacgacgga agctgggagg
      901 ggcatgggtg gtgtatctca ccgcccatgc cctttgctct aacgcagagg ccccggtgcc
      961 tttgccgaga ccgccgcgct cgctccgcgc ggagctgctg gtaagcctcg ggctcgtcac
     1021 ctcctctgcg gtgatcctcg tggggctcac gacggtggtt cttgcgggcg gcgacctgga
     1081 agaaacggcc aagcctctgg tcatcctgtg gctcggcagc accgtggtct tcgtgctctt
     1141 cggcgctcat gtggtgcgtc ggctggtgat ggtcccgctg cagcgcttgt ccgccgaggc
     1201 cgacacgctc gccgccggac gactcgacga aagcctggcc ggctatgaga ccatcgagtt
     1261 cacgcacctc tccggccgct accgggccat ggctgagagt ctgctggacg cgcagagcca
     1321 gatggtccgg gtggagaagc tggccgggat cgggacgctg gccgccgggg tcgcccacga
     1381 ggtgcggaat ccgctcgggg cactgagcgc ctacgtggac ctgctgtccc ggcgcggcgc
     1441 cgacccccag gtcaccgagg ccatgcgcgg cgccatcgga cggatcgagc ggacggtgca
     1501 gagcctgctg acgtacgccc ggcccggcgc cgccggcggg gcggtggatc tgaacgaggc
     1561 ggtccggacc agcctcgatt tcctcggcgc gcaggggctt ctgaaggggc aggcactgac
     1621 gctggagctc gagccgggcc tgcccctcgt gcggggcgag cggcacctgc tggagcaagt
     1681 ggtggtgaac ctcgtggtga atgcgtgtca ggccgcgcct cagggcagac tcgtcgtggg
     1741 aacggtgcgg gagacgttcg agccgcggca ccgcaccgcg cttcgggccc gggacgggtg
     1801 gaatcccacc gcgggtgccg cacgggccgg acgcaacggt gccgggtcga gccggccccg
     1861 gccggacgtg gccccgggaa cgccgggggt gatgctctac gtggccgacg acggtccggg
     1921 cgtcgccgag ggcgaccggg agcgcgtctt cgacccgttc tacaccacga aggacccggg
     1981 cgaaggcacc ggtctgggct tggctatcgt cgcccgcacc gtgcacgacg cgggcggcac
     2041 cgtctgggtg gatcgcgcac gggagggcgg cgcggtgttc aaggtgttca ttccgatcgc
     2101 gctgatgccc gcgtccgaag tgggggagcc gagctatgcg actgctcatt gttgacgacg
     2161 acgccgacct ccgccagtcc ctgagcctcc tgctccggga gacgggttat gacgtcgtgg
     2221 cggaggccga ccccgaggag gccctccggc gcgcgaccgc cgaggagttc gatctcatcc
     2281 tctgcgacgt gaagatgccg cgaatggatg ggctcgcgtt cctgcgccgg taccgggcgg
     2341 agcggggggc ggcgctgatc atcatgatga gcgcctacgg caccgaggac gcggcgctcg
     2401 ctgcgatgcg ggaaggcgct tacgactacc tccggaagcc cttccgtccc gacgaggtca
     2461 tcatgaccgt ccgcaaggcg gaggagcggg agcggctgcg gcgcgaggtg gagacgctgc
     2521 ggtcgagcct gggcgcggac gcggtccggg acgtggtcgt ggcggagagc cgggccatgc
     2581 gtgatctcct cgagctcgcg agccgggtgg cccggcatag caccaccgtg ctcgtcactg
     2641 gcgagagcgg caccggcaag gaggtgctcg ccaaggccat ccaccggatg agcccgcgcc
     2701 acgacatgag cttcacggcc atcaactgcg cggccattcc cgagcagctg ctcgagtccg
     2761 agctcttcgg ccacaccaag ggcgcgttca ccggcgccac ggccgaccgg gcgggcctct
     2821 tcgagggggc gcaccagggc acactgctcc tggatgagat cggtgatctg ccgctgggcc
     2881 tgcaggccaa gctgcttcgg gtgctggagg aaggcgagat ccggcgaatc ggcgggcgcg
     2941 aggacaagaa ggtggacgtg cgcgtcatcg ccgcgaccgg caaggcgctc gaccaagcgg
     3001 tggagcgcgg cgagttccgc gcggacctct actatcggct cgacgtggtc cggctccaca
     3061 tcccgccgct ccgcgagcgg ccggaagaca tctccgcgct cctgacccac ttcgcccggc
     3121 aggcggccca gcggctcggc cacccggtga gcatcacgcc gcaggccctg gccatgctat
     3181 cccagcactc ctggcccggc aatgtgcgcg agctccggaa cgcggtcgag cgggccgcgg
     3241 tgctgagcgg cgggaagccg ctcgactgcg tcgacttctc gctcagcaac gggaacggga
     3301 agggcggggt ggcggcgttg ccgcagaacg gtacctacga tctccggagc caggtcgagg
     3361 aggtcgagcg cgcgctgatt cagaaggccc tggaggcctc caagggcaac cggcgcgagg
     3421 cggcccagct gctggggatc agccttcgga cgctgttcta caagctgcgc cgggtccacg
     3481 cggcctagac gctcgagccc ggccccccgg cctagccgag cgcgctgcca gattctgcgc
     3541 cactggttgc acttcgcgca ggcaattgcg cgattctggc cgtcagggat tactcaaagc
     3601 caattccgac aaccacatag agagcggtac gccatctgct ttcaggggcg gtcatgcagg
     3661 ctttcctgcg gtcggtcttg cggccggcag cacccaaacc gggagacggt gccgtggtcc
     3721 aacgtgattc tcgcggcttc accttgatcg agacgctcgt cgtccttggc gtcgtggcgg
     3781 tcctcatgct tgtcggctgg cccaaggtgc gcaccgccct ggtcaaggcc aacgtgcgcg
     3841 gggcccggag cgccgtgatc aacacgctcc agcaggccaa gaacgtggcc atccgcgacg
     3901 gccgccgggc ggccgtcaac ttcagcaacg gcgccgggac gatgtgggtc acagcgacac
     3961 cccggaaggt ggcggcggcc ggctccacca gcgacacggt gggcgcggtg cgcagcctgg
     4021 cctcgctcta cggggtgacc gtgaacgcca gcgtcgggag ctacacgtac gacaaccgcg
     4081 ggctgagcac gagcacggcc gatgccacgg tgctgatcgc ccgagccggc taccaggact
     4141 cggtccttgt caacgcctac gggaggatca gcaagtgacc ccgcattcca gcgagggcgg
     4201 tttcaccgtt ctcgagatca tcgtcgcgat cctggtgctc accatcggcg tcacctcgct
     4261 ggtgggctcg tccgcgctgg tcacccgcca ggttggccgc ggccgcattg tcaccattgc
     4321 caacgagatc ggccggcaga agctggacag tctccgggcg atcgccgcga agaacgtagg
     4381 cggaagccgc tgcgcggatg ccgggttcgc gagcggcggt ccggccaccc ggcgccacat
     4441 cacgtacagt tggaccgtat ccggtgccgg tactgccccc cacgatgtga ccgtcacggt
     4501 ctcgtacccc cgcaagggcg gcacgtcgac cttcaccctg accaccacca tcctgtgcag
     4561 ctgaccatga cctcacgccg cggcttcacg ctggtcgagc tgctcgtcgc cctggtgctg
     4621 ttggccacgg tgctcggcgc tacctaccag ctcctggtca atacccagcg ggtatcccgc
     4681 gcgcagtcgg agcatgtgga catgcagtcc aacatgcggt ccggcgcgct catcctcgcg
     4741 tccgagctgc gggcggtcgg gttcgacact gtgcccggcg ccgccacggt ctcgccggac
     4801 atcctggaca accaggccac cagcgtccgc ttccgggcca tccggagcag cggcctcatc
     4861 tgcgcctacg gatcgaacta cttcgtcgtg gacacggtgc gcgactacgc cgcctaccgg
     4921 cagccgacca cgaacgaccg cgtcatggtc ttcgccgacc gggacacgac cctatcgagc
     4981 gacgacatgt gggtccgggg aaggaccatc acgagcttcg cggccgcgac ctgtcccaac
     5041 aacacgacct ggaacagcca tgcaggactg cgcttcaacg tgaatacctt cccggcgccc
     5101 ggcgccacga cccccgacag ctttac
//
LOCUS       DATIFF010000163         1165 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_946871, whole genome shotgun sequence.
ACCESSION   DATIFF010000163 DATIFF010000000
VERSION     DATIFF010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_946871"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(166..>1165)
                     /gene="trpS"
                     /locus_tag="VLD58_02445"
     CDS             complement(166..>1165)
                     /gene="trpS"
                     /locus_tag="VLD58_02445"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HSB53178.1"
                     /translation="LPSMDRVFSGIQPTGDLHIGNWLGAVRNWVALQDRYDCVYCVVD
                     LHAITMSHEVATFSARTRDMAIGLLAAGIDPERAILFVQSAVREHSELNWLLTTVAPL
                     GELERMTQFKDKTEKMESIPAGILCYPILQAADILLYRADKVPVGEDQVQHLELTREI
                     ARRWNALYAPDEPYLPEPQALLTAAKRIKGLDGQAKMSKSLGNTIGLLESPDEIWQKL
                     RPAATDPARVTKKDPGNPALCNLFTLHQHFSTVETVAEVDLKCRTAGWGCLDCKRRLA
                     DAMIATLAPIRERADALKRDPGEVDRILARGAERARAIAVETMAAVRRRMGFLGAT"
BASE COUNT          158 a          396 c          415 g          196 t
ORIGIN      
        1 tgagcgcgat ggcccgggtc tgctccggcg tgagccgctg cttggtgagg ggcaccagct
       61 tgccgtcgat ccgcgcccgg aagaggtcgc ccgccttgat gtggaggtcg gacgcgccgc
      121 gctccaccgc cgccttgatg atccgttcga tcggtgcgct ggccatcagg tcgctcccag
      181 gaagcccatc cgccggcgga ctgccgccat cgtctccacc gcgatcgcgc gggcccgctc
      241 ggccccgcgg gcgaggatgc ggtccacctc gccgggatcc cgcttgagcg cgtcggcccg
      301 ctcccggatc ggggcgagcg tcgcgatcat cgcgtcggcg agccgccgct tgcaatcgag
      361 gcacccccac ccggcggtgc ggcacttgag gtccacctcg gccaccgtct ccaccgtgga
      421 gaaatgctgg tgcagggtga agaggttgca gagcgccgga ttgccggggt ccttcttcgt
      481 cacccgcgcc gggtcggtgg cggcggggcg gagcttctgc cagatctcgt cgggactctc
      541 caggagcccg atggtgttgc ccaggctctt cgacatcttg gcctggccgt cgaggccctt
      601 gatccgcttc gccgcggtga gcagcgcctg cggctcgggc aggtacggct cgtcgggcgc
      661 gtagagggcg ttccagcgcc gggcgatctc ccgggtgagc tccaggtgct gcacctggtc
      721 ttcgcccacg ggcaccttgt cggcccggta gaggaggatg tcggccgcct gcaggatcgg
      781 atagcagaga atccctgccg ggatgctctc catcttctcg gtcttatctt tgaactgggt
      841 catccgctcg agctcgccga gcggcgccac cgtggtgagc agccagttca gctcggaatg
      901 ctcccgcacc gccgactgga cgaacaggat ggcccgctcg gggtcgatgc ccgccgcgag
      961 gagcccgatc gccatgtcgc gggtccgggc cgagaaggtg gcgacctcgt gcgacatcgt
     1021 gatcgcgtgc aggtccacca cgcaatacac gcagtcgtag cggtcctgga gggcgaccca
     1081 gttgcggacc gccccgagcc agttgccgat gtgaaggtcg ccggtgggct ggataccgga
     1141 gaagacgcgg tccattgagg gcaag
//
LOCUS       DATIFF010000164         1322 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_639100, whole genome shotgun sequence.
ACCESSION   DATIFF010000164 DATIFF010000000
VERSION     DATIFF010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_639100"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..303
                     /gene="ssb"
                     /locus_tag="VLD58_02450"
     CDS             <1..303
                     /gene="ssb"
                     /locus_tag="VLD58_02450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HSB53179.1"
                     /translation="GSGLADVVEKYCKKGDKLYVEGRIEYRSWQDKEGQTRYTTEIIA
                     NDIILLGGRGGAPADFAPARAGAAASAPARKDAKESKEGFEDFPEALDNEDDDLPF"
     gene            506..>1322
                     /locus_tag="VLD58_02455"
     CDS             506..>1322
                     /locus_tag="VLD58_02455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53180.1"
                     /translation="MLALGRTASAGNRALADIKRGFVQLRLGELSGSRDRFDAAVRWF
                     DQAALARPRWPYPWFGLALAKQALHGQDALVKSSRNQADGVSYFEGYTQAFGEVFARD
                     SAFQPAVDRLRRVMLAQGERDQPKALLAPIRRLGLGSGGTADDALILARDYRRHDHGD
                     SALIALHLFLERGGDSGTGSLEEARTLAALGSPRVAREAYLEGLRHLSAVTRPAYRAD
                     LAWIATSDEMLSFDRVADDSLGAWIGDFWQWRDVHELRAPGERLQEHLRRWAFV"
BASE COUNT          211 a          456 c          449 g          206 t
ORIGIN      
        1 ggctcgggcc tggccgatgt ggtggagaag tactgcaaga agggcgataa gctctacgtc
       61 gaaggccgga tcgagtaccg ctcctggcag gacaaggaag gccagacccg gtataccacc
      121 gagatcatcg ccaacgacat catcctgctg ggcggccgtg gcggagctcc ggccgacttt
      181 gccccggccc gcgccggtgc cgcggcctcg gccccggcca ggaaggatgc caaggagtcg
      241 aaggaaggct tcgaggactt ccccgaggcg ctcgacaatg aggacgacga ccttccgttc
      301 tgacccggaa ggcccgctac acccaccagg attcgggccg ccccaaaggc ggcccgatct
      361 ttcaggagtc gcgcttcgcc ggctcctgct catttccctc gtcactgttg ctgcgagcag
      421 ccccgccccc gcccagtcga cggtcgaccg gagagacctc gagcggttcc gtgccaccct
      481 tgctgagaca accgatccgg aacaggtgct ggcgctgggc cggactgcca gtgccggaaa
      541 ccgcgccctg gccgacatca agcgcggctt cgtgcagctc cggctggggg agctttcggg
      601 cagccgcgat cgattcgacg cggcggtccg gtggttcgat caggcggcac tcgcacggcc
      661 gcgctggccg tacccgtggt tcggactggc cctcgccaag caagcgctgc acggccagga
      721 tgccctggtg aagagcagcc ggaatcaggc cgatggcgtc agctacttcg aaggctacac
      781 tcaggccttc ggtgaagtgt tcgcgcggga ttccgccttt cagccggcag tcgaccggct
      841 gcgccgcgtg atgctggcgc agggggagcg agaccagcca aaggcgttgc tggcacccat
      901 ccgccgtctg ggcctcggca gcgggggaac cgcggacgat gcgctcatcc tcgcccggga
      961 ctaccgccgc cacgatcacg gtgattccgc cctgatcgcg ctgcacctct ttctcgagcg
     1021 gggtggcgac agcggaaccg gaagcttgga agaagcccgc acgctggccg cactcggctc
     1081 gccccgggtg gcgcgggaag cctacctcga agggttgcga cacctctccg ccgttactcg
     1141 cccggcatac cgcgccgatc tcgcgtggat cgccacctcc gacgagatgc tgtcgttcga
     1201 ccgggtcgcc gatgactcgc tcggggcctg gatcggcgac ttctggcagt ggcgcgatgt
     1261 tcacgagctg cgcgcgccgg gcgaacggtt gcaggagcac ctgcgccgct gggccttcgt
     1321 cg
//
LOCUS       DATIFF010000165         1053 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1562166, whole genome shotgun sequence.
ACCESSION   DATIFF010000165 DATIFF010000000
VERSION     DATIFF010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1562166"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1053
                     /locus_tag="VLD58_02460"
     CDS             <1..>1053
                     /locus_tag="VLD58_02460"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HSB53181.1"
                     /translation="ARRLVRPLLRGLPPAHPASGLPLLFCAALLFVPGRGGIQQIPIN
                     QSSAYFSTTPFANQAALNVGWNFFDSWVRGLDRRTNPYILAPADSARAEVARAEAPRP
                     GAGARLLRRDRPNILLVVWEGFTARSVERLGGLKGVTPVFDSLAAKGLLFRRFYAAGD
                     RTEKGLAALLSGAPTIPNASIMMVPSKAATLPSLSIDLGAIGYRTGFYYGGELGFANL
                     KSFALNARFGRIVGKDDFPGTALRSKWGAHDETVAARILEDLREPEEPFFVTWLTLSS
                     HEPFDVPGPVRVPGPDGESRFLNSLAYTDRVLGDFLGRASRMPWWDHTLVIIVADHSK
                     KLERTDAAVPYKSAES"
BASE COUNT          140 a          378 c          353 g          182 t
ORIGIN      
        1 tggcccgccg gctggtgcgg ccgctcctcc ggggactgcc tccggcccac ccggcgtcgg
       61 gcctgcccct cctcttctgt gcggcgctgc ttttcgtgcc gggccggggc ggcatccagc
      121 agattccgat caaccagagc agcgcctact tctcgaccac gccgttcgcg aatcaggcgg
      181 cgctcaatgt cgggtggaac ttcttcgatt cctgggttcg cggtctcgac cgtcgcacca
      241 atccctatat tctggctccg gccgattccg cgcgggcgga ggtggcgcgt gccgaggcgc
      301 cgcggcctgg cgcgggggcg cggctgctcc gccgggaccg gcccaatatc ctcctcgtcg
      361 tctgggaggg attcaccgcc cggtcggtgg aacggctcgg aggtctcaag ggagtcaccc
      421 cggtcttcga ttcgctggca gcgaaggggc tcctcttccg ccggttctac gcggccggcg
      481 accggaccga gaaggggttg gcggcgctgc tctccggggc ccccacgatc ccgaatgcct
      541 ccatcatgat ggtgccgtcc aaggcggcca cgctgccgtc cctgtccatc gatctcggcg
      601 cgatcggata ccggacgggg ttctactacg gcggggagct cggcttcgcc aacctcaaga
      661 gcttcgcact caacgcccgg ttcggccgga tcgtcggcaa ggacgatttt cccggcaccg
      721 ccctgcggtc caagtggggg gcccacgacg agacggtggc ggcgcggatc ctcgaggatc
      781 tccgggagcc ggaggagccg ttcttcgtca cctggctcac cctgagcagc catgagccgt
      841 tcgacgtccc cggaccggtg cgcgtgcccg gccccgacgg ggagtcgcgc ttcctcaact
      901 cgctcgccta caccgaccgg gtgctgggcg atttcctggg ccgcgcctca cgaatgccct
      961 ggtgggacca cacgctcgtc atcatcgtgg ccgaccattc gaagaagctc gagcggaccg
     1021 acgcggccgt gccctacaaa tcggcggaga gct
//
LOCUS       DATIFF010000166         2797 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1408750, whole genome shotgun sequence.
ACCESSION   DATIFF010000166 DATIFF010000000
VERSION     DATIFF010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2797
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1408750"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..417
                     /locus_tag="VLD58_02465"
     CDS             <1..417
                     /locus_tag="VLD58_02465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase domain-containing protein"
                     /protein_id="HSB53182.1"
                     /translation="ASRKLILKGVDGVVFVADSQIDRMDANIEAMQNLYENMAQYGYD
                     MTRIPFAIQYNKRDLPNAAPITELQAALNPGWPVSDVSRQRLTPDPQHEGEYLVFQQD
                     GQWIERAPYFEAVALTGEGVFDTLRAISKTVVKSLG"
     gene            436..1065
                     /gene="pgsA"
                     /locus_tag="VLD58_02470"
     CDS             436..1065
                     /gene="pgsA"
                     /locus_tag="VLD58_02470"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HSB53183.1"
                     /translation="MWTLPNIITIVRICFTPVIALLPFIEGYWPKLLAFVIFIIAAVS
                     DVFDGRLARRRKQVTDLGILLDPIADKLLLFSTLIPIYWISRQRHDLYDIPLWGSIPL
                     WICLLLIGRELAMTGFRWWARRRGVVIPAGGAGKLKTVIQNVFIGATIAWFAFRDARK
                     PLGWEHNRIAEYWNEFHGTFVAVTLPIAALLTVYSFAVYIYRHRRLFSR"
     gene            1150..2388
                     /locus_tag="VLD58_02475"
     CDS             1150..2388
                     /locus_tag="VLD58_02475"
                     /inference="COORDINATES: protein motif:HMM:TIGR00200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HSB53184.1"
                     /translation="MNLELVTIGTELLLGFTLDSNGSEIARALGEHGVRVVRRTSVAD
                     READIGAAVSEALARTGAVVTTGGLGPTRDDITKRAVAQLFGAPLLFDEGVWQTVVAR
                     FAKLGRVPGASNRVQAEVPRGATVLANRWGTAPGLWLEGERGLVVMLPGVPYEMRNLL
                     RHEVVPRLAARARGRVVRSRVLRTTGIPESALAERLGDVEAEIAPLTLAYLPGEDGVD
                     LRVTAWDLESPEADARLDVAAELLRSRAGDRIYGEGDADLAAVVLQAARTLGLRLAVA
                     ESCTGGLLAKRLTDTPGSSDVVVGGVVAYDNAVKTALLEVPQMLIDRYGAVSEEVVRA
                     MALGAVRRFGVDLAAAVTGIAGPSGGTPEKPVGTVWLATALGERVEAVPVLLPGPRAN
                     IRARSAQAALFLLWHRLQPA"
     gene            2476..>2797
                     /gene="grpE"
                     /locus_tag="VLD58_02480"
     CDS             2476..>2797
                     /gene="grpE"
                     /locus_tag="VLD58_02480"
                     /inference="COORDINATES: protein motif:HMM:NF013212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HSB53185.1"
                     /translation="MSDNERFTGEPEPGSQEPAAEATASAAPAGVAGVPAEPEAEAIR
                     RLETEVADLRDRHLRLAAEFDNYRKRVARERVELADRAQAAFVIRLLDVLDDLDRVVD
                     DSRNT"
BASE COUNT          407 a          949 c          994 g          447 t
ORIGIN      
        1 gcgtcccgga agctcatcct caagggggtg gacggggtcg tgttcgtggc cgacagccag
       61 atcgaccgga tggatgcgaa catcgaagcg atgcagaacc tgtacgagaa catggcacag
      121 tacggctacg acatgacgcg gatccccttc gcgatccagt acaacaagcg ggatctgccc
      181 aatgcagccc cgattaccga gctgcaggcg gcgctcaacc cgggctggcc ggtgagcgac
      241 gtctcccggc agcggctcac gcccgacccg cagcacgaag gcgagtatct ggtcttccag
      301 caggacggcc agtggatcga gcgggccccg tacttcgagg cggttgccct gacgggcgag
      361 ggggtgttcg ataccctccg ggcgatcagc aagacggtcg tcaagtcgct ggggtaacgg
      421 gagcgggtat tcggtatgtg gacgttgccc aacatcatca ccatcgtccg gatctgcttc
      481 acgccggtca tcgccctcct gcccttcatc gaggggtact ggcccaagct cctcgccttc
      541 gtgatcttca tcatcgccgc ggtgagcgac gtcttcgacg ggcgcctggc ccgccgccgc
      601 aagcaggtga ccgacctcgg catactcctc gaccccatcg ccgacaagct gctgctcttc
      661 tccaccctga tccccatcta ctggatctcc cgccaacggc acgacctcta cgacatcccc
      721 ctctggggca gcattccgct ctggatctgc ctcctgctca tcggccggga gctcgccatg
      781 accgggttcc gctggtgggc ccggaggcga ggggtggtga tcccggctgg gggtgcgggc
      841 aagctcaaga cggtgatcca gaacgtgttc atcggcgcca cgatcgcatg gttcgccttc
      901 cgtgacgccc gtaagccgct cggctgggag cacaaccgga tcgccgagta ctggaacgag
      961 ttccacggga ctttcgtcgc ggtcacgttg cccatcgccg cgctgctcac ggtctacagc
     1021 ttcgcggtgt acatctatcg gcaccgaagg ctgttctcca ggtgagaagt cgagagtgag
     1081 aagtcagaag tctcccctcg ttcgcaccgg cctcgctttc gcctctcact tctcaccgct
     1141 cactccctct tgaacctcga gctggtcacc atcggcaccg agctgcttct cggcttcacg
     1201 ctcgactcga acgggagcga gatcgcccgg gcgctcggcg agcacggcgt gcgggtagtg
     1261 cgccgcacgt cggtcgccga ccgggaggcc gacatcgggg cggcggtctc cgaggccctg
     1321 gcgcgcacgg gcgccgtggt gacgacgggc ggtctaggcc ccacccggga cgacatcacc
     1381 aagcgggcgg tcgcgcagct gttcggggcg ccgctcctgt tcgacgaagg cgtgtggcag
     1441 accgtggtgg cgcggttcgc gaagctgggc cgggtgccgg gcgcgagcaa ccgggtgcag
     1501 gcggaggtgc ctcggggcgc gaccgtgctg gccaaccggt ggggcaccgc cccggggctc
     1561 tggctggaag gggagcgggg cctcgtcgtc atgctgcccg gcgtgccgta cgagatgcgg
     1621 aacctgctcc gccacgaggt agtcccgcgc ctcgccgccc gggcgcgggg aagggtggtc
     1681 cgctcccgcg tcctgcgaac cacgggcatt cccgagtccg cgctcgccga gcggctgggg
     1741 gacgtggagg ccgagatcgc gcccctcacc ttggcctatc tgccggggga agacggcgtg
     1801 gacctccggg tgacggcgtg ggacctggag tcccccgagg cggacgcccg gctcgacgtc
     1861 gcggccgagc tcctgcgctc ccgggccggc gaccgcatct acggggaagg cgacgcggat
     1921 ctggcggccg tcgtgctgca ggcggcgcgg accctgggcc tgcgcctggc cgtcgccgag
     1981 tcgtgcaccg gcgggctgct cgccaagcgc ctcaccgaca cgccggggag ctccgatgtc
     2041 gtggtcgggg gcgtcgtggc ctatgacaat gccgtcaaga cggcgctgct cgaggtgccg
     2101 cagatgctca tcgatcggta cggcgccgtg agcgaggagg tcgtgcgcgc catggcgctc
     2161 ggcgcggtgc gccgcttcgg cgtggacctg gcggccgcgg tgaccggtat cgcggggcct
     2221 tcgggcggca ccccggagaa gccggtggga acggtctggc tcgcgaccgc gctcggcgaa
     2281 cgggtcgagg ccgtccccgt gctgctcccc ggcccgcggg cgaacatccg ggcccgctcc
     2341 gcgcaggccg cgctgtttct cctctggcac cggctgcagc cggcctgaag ccggctcggt
     2401 ccgctgtccc tctctgattc cggtcgaaat tccggtgtta tcttaccgct accattggcg
     2461 gggggaagta cccaagtgtc cgacaacgag cgatttaccg gcgagccgga accgggaagt
     2521 caagagccgg cggcggaagc cacggcatcg gctgcgcccg cgggtgtggc gggagtgccg
     2581 gctgagccgg aggcggaggc gatccggcgg ctggagaccg aggtcgcgga cctgcgtgac
     2641 cggcacctcc gcttggccgc ggaattcgac aactatcgga agcgggtggc cagagagcgg
     2701 gtggagctgg ccgaccgggc ccaggccgcg ttcgtgatcc ggctcctcga cgtgctggac
     2761 gatctcgatc gtgtggtgga cgattcccgc aacaccc
//
LOCUS       DATIFF010000167         1102 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_178266, whole genome shotgun sequence.
ACCESSION   DATIFF010000167 DATIFF010000000
VERSION     DATIFF010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178266"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..648
                     /locus_tag="VLD58_02485"
     CDS             <1..648
                     /locus_tag="VLD58_02485"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HSB53186.1"
                     /translation="GPFPRDFLEDTHDAYDGSIAYLDFQIDSLLTALGSRGLLDNTVV
                     IITSDHGEHFGEHGLVQHGSSLFLPVLHVPLAIIAPGKVTAGTRVPSPVSLRSIGSTV
                     LTYAGTANPTFPGRSLTEYLRGPGLPIPVDTLFSAVDYDRLLPKWPPTQPVLRGNMRA
                     IVLDSLHYIRNGDGVEELFHLGHDSWEVRNLVGVPEFASLLDAHRAALQTMAGGK"
     gene            complement(663..>1102)
                     /locus_tag="VLD58_02490"
     CDS             complement(663..>1102)
                     /locus_tag="VLD58_02490"
                     /inference="COORDINATES: protein motif:HMM:NF018937.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1445 domain-containing protein"
                     /protein_id="HSB53187.1"
                     /translation="ALSGAGLPLRHLEENRNVPMYRTSRATVPAGPFSGPLVVSMRPM
                     PRARVADAIALSAPFRSAHGAPVHHGDPAALGIRDLGRPDWGEPVTIGEDEVPVFWAC
                     GVTSQVAVEGALEAGAIPWAVSHAPGHMFITDLPTEAALAPPR"
BASE COUNT          159 a          419 c          363 g          161 t
ORIGIN      
        1 ggccccttcc cccgggactt cctcgaggac acgcacgacg cctatgacgg ctcgatcgcg
       61 tatctcgact tccagatcga ttcgctgctg accgcgctgg gcagccgtgg cctgctcgac
      121 aacaccgtgg tcatcatcac ctcggaccac ggcgagcact tcggcgagca cggcctggtg
      181 cagcacggca gcagcctctt cctgccggtg ctgcacgtgc ccctggccat catcgcgccc
      241 ggcaaagtga cggccggtac ccgggtcccc tccccggtgt ccctgcgcag catcggcagt
      301 accgtgctca cctatgcggg gacggcgaac ccgaccttcc caggccgctc gctcaccgaa
      361 tacctgcggg gtcccggcct gccgatcccg gtggacacgc tcttctccgc ggtcgactat
      421 gaccggctgc tgcccaagtg gccaccgacc cagccggtgc tgcgtggcaa catgcgggcg
      481 atcgtgctcg acagcctcca ctacatccgg aacggggatg gcgtggagga actcttccac
      541 ctcggtcacg attcctggga ggtccggaat ctggtcggcg tgccggagtt cgcgtcgctg
      601 ctcgacgccc accgcgccgc gctccagacc atggccggag gcaagtagga ggcgctgcgc
      661 cctcagcggg gcggggccag ggccgcctcg gtcggcaggt cggtgatgaa catgtgaccc
      721 ggcgcgtggc tgacggccca cgggatggca ccggcctcga gcgcgccctc caccgccacc
      781 tgactggtca cgccgcaggc ccagaagacc ggtacttcat cctccccgat cgtcaccggt
      841 tcgccccagt ccgggcggcc gaggtcgcgg atcccgagcg ccgcagggtc cccgtggtgc
      901 accggcgccc cgtgcgccga gcgaaagggc gcgctgagcg cgatcgcgtc ggccacccgt
      961 gcccgcggca tcggccgcat gctcacgacc agggggcccg agaacggccc cgccggcacg
     1021 gtcgcgcggc tggtacggta catcggcacg ttgcgattct cctccagatg ccggagcggc
     1081 aacccggcgc ctgacagcgc cg
//
LOCUS       DATIFF010000168         3533 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1101444, whole genome shotgun sequence.
ACCESSION   DATIFF010000168 DATIFF010000000
VERSION     DATIFF010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3533
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1101444"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..412)
                     /locus_tag="VLD58_02495"
     CDS             complement(<1..412)
                     /locus_tag="VLD58_02495"
                     /inference="COORDINATES: protein motif:HMM:NF014409.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HSB53188.1"
                     /translation="MRVLGVIPARLGSTRLPNKPLQLLAGEPLITRVIQRVLAHGVVD
                     ELVVATDSEQVAAAAARAGVRAVLTHDGHLSGTDRVAEVANRPEFAGYDVVANVQGDE
                     PFVPRDALAGALGRVGVGDDIGTAAAPLAPELAVD"
     gene            complement(522..1133)
                     /locus_tag="VLD58_02500"
     CDS             complement(522..1133)
                     /locus_tag="VLD58_02500"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HSB53189.1"
                     /translation="MLLVLDNYDSFTYNLVQYAGELGADPVVYRNDALTVEVALAARP
                     SAIVISPGPCTPREAGISVPLVRAAAEQGIPLLGVCLGHQSIGEAFGGKVVRAERLMH
                     GKTTMVEHTREALFGDLPSPFEVMRYHSLVVSPAGLPAELEVTAWSADRPAGQEIMAL
                     RHLTSPIWGVQFHPESVGTRHGMRLLANFLTLGRLAQRADAAA"
     gene            complement(1146..1889)
                     /locus_tag="VLD58_02505"
     CDS             complement(1146..1889)
                     /locus_tag="VLD58_02505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53190.1"
                     /translation="MRTYWLRILLGAVAIYAIGMLGVFMFRRGKVKIDSVVSGSGPLS
                     IPLPFVPFQLNGTRLGTIERVVVNRDAPKKVSSVDLQVKLEDSLVAQGLQGCRLAANV
                     ESDSTAKGNLNIHPGRIDERTFFYCAKDDSALVEFGEVTLNPGNITLPLLVPSSLAEE
                     LRSGQWVQTGHSGDSLAADSLAARAESLAGKAERLGDSIADAQDLAAKKLRASQARQL
                     GDSLRAEGLRRADSVRRALGRMADSLGGR"
     gene            2020..2757
                     /locus_tag="VLD58_02510"
     CDS             2020..2757
                     /locus_tag="VLD58_02510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB53191.1"
                     /translation="MIEVEGLEKYYGDLPAVRGLSFHVRPGEVLGLVGPNGAGKTTTI
                     RSIAGIIIPTRGTIRIGGHDLGLDAVAAKSLLAFIPDEPHLFDYLTVEEHLRFVGRLY
                     QVVDIEDRIPGLLDEMDLDPKRSALPGELSRGMKQKLAIACGLLHQPRALLLDEPLTG
                     LDPLGIRRMKATIVSRARAGTAVILSSHLLHLVEEICTRVLVMKAGEAVAFGTIPEIV
                     ASRPALSGRRLEDVFLALISPETDPAA"
     gene            2754..>3533
                     /locus_tag="VLD58_02515"
     CDS             2754..>3533
                     /locus_tag="VLD58_02515"
                     /inference="COORDINATES: protein motif:HMM:NF028272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative ABC exporter domain-containing protein"
                     /protein_id="HSB53192.1"
                     /translation="MIRVFVYLAWRSAYNRLARQLRQLKSPRYLAALALGLSYLWVMA
                     VEQRPAPAPASVAGARWLELLGAIGVVGAVAWGWIFGVERRVLAFTPAEVTFLFSGPV
                     PRRGLIQYKLLRNQLLILFNSLLWTLILARERFGASPWLRALSIWVLLTTLSLHRLGA
                     SFVRTSLLEHGRFGLRHRVVSLLLLGGVFVGLAWSLRDALPLLAAGWAGGVTGLLNAL
                     TDAAAAPLPRLLLAPFRAMVRPLTAHSPEEWLRSMGPALLLL"
BASE COUNT          531 a         1226 c         1218 g          558 t
ORIGIN      
        1 ggtcgacggc aagttccggc gccagcggag cagcggcggt gccgatgtcg tcgcccacgc
       61 cgaccctccc cagcgcgccc gccagcgcat cccggggaac gaacggctcg tctccctgga
      121 cgttggccac cacgtcgtag ccggcgaatt ccggccggtt tgccacttcc gccacccggt
      181 ccgtgcccga gaggtgtccg tcgtgcgtca gcaccgcccg aactcccgcc cgcgccgccg
      241 ccgcggccac ctgctccgag tcggtggcca ccaccagctc gtcgaccacg ccatgggcca
      301 gcacgcgctg gatcacccga gtgatgagcg gctcaccggc cagaagctgg agcggtttgt
      361 tggggagacg ggtcgagcct agacgagccg gaatgacacc caggacgcgc atagcgaaag
      421 gtaacagcac cccgggggcg agtcaaaact catgccgggc aactgcagtg cccgcgatct
      481 gtccactatg cggttgccaa gcttgacgtt aggaggaggg ttcaggcagc ggcgtcggcc
      541 cgctgagcga gcctccccag ggtcagaaaa ttggccagga gccgcatgcc gtggcgggtg
      601 ccgacggact cggggtggaa ctgcacgccc cagatgggag aggtgaggtg gcgcagggcc
      661 atgatctcct ggccagccgg ccggtcggcg gaccaggcgg tgacctccag ctccgcgggc
      721 aggccggcgg gggagacgac gagcgagtgg tagcgcatca cctcgaaggg tgagggcagg
      781 tcgccgaaga gcgcctcgcg cgtgtgctcc accatcgtcg tcttcccgtg catcaggcgc
      841 tcggcccgga cgaccttccc gccgaaggct tcgccgatgg attgatgccc caggcatacc
      901 cccagcagcg gaatgccctg ctccgcggcc gcgcgcacga gcggcacgct gattccagcc
      961 tcgcgcggcg tgcaggggcc gggcgagatg acgatggcgc tgggccgcgc ggcgagcgcc
     1021 acctctaccg tgagcgcgtc gttccggtac accaccggat cggcgcccaa ctcgccggcg
     1081 tactggacca ggttataggt gaagctgtcg tagttgtcga ggacgagaag catcgtcctt
     1141 cgaagctagc ggccccccag cgagtccgcc atccggccca gagcccgacg gacggagtcc
     1201 gcgcggcgca gcccttcggc acgcagcgag tcgcccagct gacgagcctg gctggcccgg
     1261 agcttcttcg cggccagatc ctgcgcgtcc gcgatcgagt cgcccagccg ctcggccttt
     1321 ccggccagcg actcggcacg cgcagcgagc gagtccgcgg caagcgagtc tccggaatgt
     1381 ccggtctgca cccactggcc cgagcgcagc tcttcggcca ggctgctcgg gacgaggagc
     1441 gggagggtga tgttgccggg attgagtgtc acctcgccga attcaaccag cgccgaatcg
     1501 tccttcgcgc agtagaagaa agtgcgctcg tcgatccgtc cggggtggat attgaggttt
     1561 cccttggccg tggagtcgct ctcgacgttg gcggccaggc ggcacccctg aagtccctgg
     1621 gccaccaggg agtcttcgag cttcacctgc aggtctaccg aggacacctt cttgggggca
     1681 tcacgattca ccaccacccg ctcgatggta cccagcctgg tgccattgag ctggaacggg
     1741 acgaacggca gtggaatgct gagcgggccc gatccggaca ccacggagtc gatcttgacc
     1801 tttccgcgcc ggaacatgaa gacgcccagc atgccgatgg cgtagatggc cacggccccg
     1861 agcaggattc gcagccagta ggttcgcata gagtcggcct ccggtgccgc agacgaaagc
     1921 ccgcgggggg aacatgttcc aacgagagac gttccaggac agccgaaagt ttcacccggc
     1981 cggcccccgc cgggagtccc ccggagcccg gaggcagccg tgatcgaggt cgaggggctg
     2041 gagaaatact atggagacct cccggcagtc cgcgggctgt ccttccacgt gcggcccggc
     2101 gaggtcctgg ggctggtggg gccgaatggc gccgggaaga ccacgaccat ccggagcatc
     2161 gccggaatca tcatccccac gcggggcacc atccggatcg gcggccacga cttgggactg
     2221 gatgccgtcg ccgccaagtc gctgctggcg ttcattccgg acgagccgca cttgttcgac
     2281 tacctcaccg tcgaggagca cctccgcttt gtgggccggt tgtaccaggt cgtggacatc
     2341 gaggaccgga tcccgggttt gctggacgag atggacctcg atcccaagcg atcggcactc
     2401 ccgggtgagc tctcgcgggg catgaagcag aagctggcca tcgcctgcgg gctgctccat
     2461 caaccgaggg ccctgctgct cgacgaaccg ctcacggggc tggacccgct gggtatccgc
     2521 cgcatgaaag cgacgatcgt gagccgggcg cgggcgggca cggcggtgat cctgagctcg
     2581 cacctgctgc acctcgtcga ggagatctgc acccgcgtgc tggtcatgaa ggcgggagag
     2641 gcggtggcgt tcgggaccat tcccgagatc gtggccagcc gacctgccct gagcggacgt
     2701 cggctggagg acgtcttcct cgcgctcatc tcacccgaga cggaccccgc ggcgtgattc
     2761 gggtcttcgt ctatctcgcc tggcgctcgg catacaaccg gctcgcccgc cagctccgcc
     2821 agctgaagag cccgcgctac ctggccgcgc tggcgctcgg actcagctat ctgtgggtca
     2881 tggccgtgga gcagcgcccg gcaccggcgc cggcctccgt ggcgggggcc cgctggctcg
     2941 agctgctcgg cgcgatcggc gtggtcggcg cggtggcctg gggttggatc ttcggcgtgg
     3001 agcgccgagt cctggcgttc acgcccgcgg aggtgacgtt tctcttctcc ggcccggtcc
     3061 cccggcgcgg gctcatccag tacaagctgc tgcgcaacca gctcctcatt ctcttcaact
     3121 cgctgctctg gaccctgatc ctggcacgcg agcggtttgg ggcctcgccg tggctgcgtg
     3181 cgctgtccat ctgggtgctg ctcacgacac tctccctgca ccggctgggt gcgtcgttcg
     3241 tgcgcaccag tctgctcgag cacggccgct tcgggctgcg gcaccgcgtc gtctcgctgc
     3301 tgctcctggg aggcgtgttc gtcgggctgg cctggagcct gcgggacgcc ctgcccctgc
     3361 tggcggcagg ctgggccggc ggagtcacgg gcctgctcaa cgcgctgacc gacgcggcgg
     3421 ccgcaccgct gccccgtctg ctgctcgccc cgttccgggc gatggtccgc ccgctcaccg
     3481 cgcactcccc ggaggaatgg ctgcgcagca tgggccccgc cctgctcctc ttg
//
LOCUS       DATIFF010000169         1729 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1101446, whole genome shotgun sequence.
ACCESSION   DATIFF010000169 DATIFF010000000
VERSION     DATIFF010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1729
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1101446"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..564
                     /locus_tag="VLD58_02520"
     CDS             <1..564
                     /locus_tag="VLD58_02520"
                     /inference="COORDINATES: protein motif:HMM:NF012550.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HSB53193.1"
                     /translation="GGIHTIDLSALRPMVAHPGDPDRGVPSDPTNGAWIDEIGDVPVD
                     IAYGGSCTAGKIDDLIFYHQVVKEALDAGFKIAPGVRFMIQCGSQAVEDFVRENGLAD
                     TFERAGVQLIHPGCGACIGCGPGVSETADEVTVSAINRNYKGRSGPGKLWLASPLTVA
                     ASAFTGRITAYTPGMFARMASERPVMV"
     gene            complement(561..>1729)
                     /locus_tag="VLD58_02525"
     CDS             complement(561..>1729)
                     /locus_tag="VLD58_02525"
                     /inference="COORDINATES: protein motif:HMM:NF015316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="outer membrane protein transport protein"
                     /protein_id="HSB53194.1"
                     /translation="RASDPSAMTYNPAAITKLNGLQIEAGLDMNNPTISYKSQTGNFQ
                     ARHIIQFPPALYVTWRPKSGPFALGLGYDSPFNDSLNWEPRLFPGRFVTRRTEVRVYE
                     LHPVLAYDLGEGWSVAAGFRYAFGNIDRDVNGVITVAAGPPIGPVTPVPVEIERNATA
                     DVNATAWDVSVHYAAPSWGWGGVFRSAESLKGNGDVSYKPRDVPTGIPGLDTALQSTF
                     TNGRVRESFEIPREVRAGIWYAPYPELRIELDASFQSWSSLEATDITYTPNPFNPLTP
                     TETIPRNWKDTTGLRLGLEGNITDNFLLFGGVALEQSPVPDRTIEPGFPYGDFMVYAA
                     GFTYNFSWVSFDMAYSYHDFDSRNASRQEPLSPGRTGTYSGRDQVFGITARWRF"
BASE COUNT          253 a          540 c          657 g          279 t
ORIGIN      
        1 ggcggcatcc acacgatcga cctctcagcg ctgcggccga tggtggccca tccgggggac
       61 ccggaccgcg gcgtcccgtc cgacccgacg aacggcgcct ggatcgacga gatcggcgac
      121 gtgccggtcg acatcgccta cggcgggagc tgcacggcgg ggaagatcga cgatctgatc
      181 ttctatcacc aggtggtcaa ggaggcgctg gacgccggtt tcaagatcgc tccgggcgtg
      241 cggttcatga tccagtgcgg ctcgcaggcg gtggaggatt tcgtgcgcga gaacggcctc
      301 gccgacacct tcgagcgggc gggcgtgcag ctcatccatc ccggctgcgg cgcctgcatc
      361 ggctgcggcc cgggggtctc ggagacggcg gacgaggtca ccgtctcggc gatcaaccgc
      421 aactacaagg ggcggagcgg cccgggcaag ctctggctcg cctcgccgct gaccgtggcc
      481 gcctccgctt tcaccggccg gatcaccgcc tacacgccgg ggatgttcgc gcgcatggcg
      541 agtgagcggc cggtgatggt ctagaaccgc caccgggccg tgatgccgaa cacctgatcg
      601 cggccgctgt aggtgccggt gcggccgggg ctcagcggct cctggcggct ggcgttgcgg
      661 ctgtcgaaat cgtggtagga gtaggccatg tcgaaggaga cccaggagaa gttgtaggtg
      721 aagcccgcgg cgtagaccat gaagtcgcca taggggaagc cgggctcgat cgtgcggtcc
      781 ggcaccggcg actgctccag ggcgacgccg ccgaagagga ggaagttgtc ggtgatgttc
      841 ccctccaggc cgagccgcag gccggtggtg tccttccagt tgcgggggat cgtctccgtc
      901 ggggtgaggg ggttgaacgg gttgggcgta taggtgatgt ccgtcgcctc caggctcgac
      961 cagctctgga agctggcgtc gagctcgatc cgcagctcgg gatagggggc gtaccagatg
     1021 ccggcccgca cctcgcgggg gatctcgaac gactcgcgga cgcgcccgtt cgtgaaggtg
     1081 ctctggagcg cggtgtcgag ccccgggatg ccggtgggga catcgcgcgg cttgtagctc
     1141 acgtcgccgt tccccttcag gctctcggcg ctgcggaaga cccctcccca cccccaggac
     1201 ggcgccgcgt agtggaccga gacgtcccag gccgtggcgt tgacgtcggc ggtggcgttc
     1261 cgctcgatct ccacgggtac cggcgtgacg gggccgatcg gcgggccggc cgcgacggtg
     1321 atgacgccgt tgacgtcgcg gtcgatgttc ccgaaggcgt agcggaagcc ggcggccacg
     1381 ctccatccct cgcccaggtc gtacgccagc acggggtgga gctcgtagac ccgcacctcg
     1441 gtgcggcggg tgacgaagcg gccggggaac agccggggct cccagttgag gctgtcgttg
     1501 aacggggagt cgtagccgag gcccagcgcg aaggggccgc tcttcggccg ccaggtgacg
     1561 tagagggcgg gcgggaactg gatgatgtgg cgggcctgga aattaccggt ctggctcttg
     1621 tagctgatcg tcgggttgtt catgtccaga ccggcctcga tctgcaaccc gttcagcttg
     1681 gtgatggcgg cggggttgta ggtcatcgcc gaagggtcgg acgcccggg
//
LOCUS       DATIFF010000170         1065 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1562595, whole genome shotgun sequence.
ACCESSION   DATIFF010000170 DATIFF010000000
VERSION     DATIFF010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1562595"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(74..619)
                     /locus_tag="VLD58_02530"
     CDS             complement(74..619)
                     /locus_tag="VLD58_02530"
                     /inference="COORDINATES: protein motif:HMM:NF016269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSC84-related protein"
                     /protein_id="HSB53195.1"
                     /translation="MRGMRRGAMAVLLAGSLLSGCSTAPVTQEDRNELVQEATDALAQ
                     MAAADPGVDSLIRRGYGYALFPEVVKGGLVLGGGYGRGVVYEQGQHIGYASLAQASFG
                     LQIGGHSYRELIVFENKAALDRFRENRLDFTADAEAVLADGGATANAQFIDGIVVVIA
                     PRSGVMAQAAIGGQQITYVPK"
BASE COUNT          156 a          396 c          333 g          180 t
ORIGIN      
        1 atacggcccg agatcgacga ccgggatcat gccgatgaga tagcaccccg ccggggcctt
       61 gacaaggagg cgactacttc ggcacgtagg tgatctgctg cccgccgatg gcggcctggg
      121 ccatcacgcc cgaccgcggc gcgatcacga ccacgatgcc gtcgatgaac tgggcgttcg
      181 cggtggcccc tccgtcggcg aggaccgcct cggcgtccgc cgtgaaatcg agccggttct
      241 cccggaagcg gtccagggcc gccttgttct cgaacacgat gagctcgcgg tagctgtgac
      301 cgccgatctg gagcccgaac gacgcctgcg cgaggctcgc gtatccgatg tgctgccctt
      361 gctcgtacac caccccgcgg ccgtatcccc cgccgaggac cagcccgccc ttgacgacct
      421 cggggaacag ggcatagccg taccccctcc ggatcagcga gtccaccccg ggatccgccg
      481 ccgccatctg cgccagcgcg tcggtcgcct cctggaccag ctcgttgcgg tcttcctgcg
      541 tcaccggcgc cgtgctgcag ccgctcagca gcgaccccgc cagcaggacc gccatcgcac
      601 cccgtcgcat ccccctcatg gtgacccctc cttccagtaa gcgtccgact gcttgtccct
      661 ggattgtact gcgtgctacg gaccggcggc gggggttcgg cctgcgaggt caggaacttc
      721 gcgggcgccc cgtcacccgg agtggggttg ctgcggggga cagcgcccgc tcgcggtccg
      781 gccggttcac ggcgactcta gcggccgagt cttcatgttt cggatttcga gatagctgcc
      841 tggttgcaac tcctgagcga cgtagccccg atcgctcatg caccggcgga ctctctcggg
      901 actgggctgg cccccgccgg cgctcccccc gcattcggtt tcgtcgcggg ccatttgctc
      961 gaacgtcgcc ccaggcctgc tgtagacgta cgctggcgcc gccgactcac atccccccac
     1021 caggatcgtg agcgtgatag ctgcaagaac tcgcatgaac atcga
//
LOCUS       DATIFF010000171         1736 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1255744, whole genome shotgun sequence.
ACCESSION   DATIFF010000171 DATIFF010000000
VERSION     DATIFF010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1736
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1255744"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..657
                     /locus_tag="VLD58_02535"
     CDS             <1..657
                     /locus_tag="VLD58_02535"
                     /inference="COORDINATES: protein motif:HMM:NF039287.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HSB53196.1"
                     /translation="GFIYYGGDRFSKSAGIRLDLREAIARHGPDALRYFLLREVGFAG
                     DGNFSWERFDERYHADLADGLGNLASRSLAMIERYRGGVVPDGGATPLDAAGEAALRT
                     YGAAMDALDLKGGADAAWSLVTVANQYIVQTAPWTLAKQGKDPELDAALAALARVLVR
                     LGVMAGPFMPGKAAELWSHLGQDAPVTAAWALATQPEVGGRKVRKPEGIFPKPSQPNP
                     "
     gene            829..>1736
                     /locus_tag="VLD58_02540"
     CDS             829..>1736
                     /locus_tag="VLD58_02540"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HSB53197.1"
                     /translation="MSERKWTLVVVPPGSSTSKVIEVSQRVLKTAVGFIGVFVLVALL
                     LGYGTMSRSIDLQRSAALEKENARLAEELGRLHGEMSTLSDTLKTLAERDARIRLLAN
                     LEPNDPAVQQAGIGGPAAPPAKDGLASVGLLGQRAEEVRVDLGALIRRANLLAASFDE
                     ATDSLARHRDRLAAMPSIMPTTGWLTSAFSSMREHPILHIARPHEGIDVTAPMGAPIQ
                     APAGGRVTKTGWESGYGNVIVIDHGFGLTTKFAHCSRLEARTGQQVKRGDVIAYVGNT
                     GLATGPHLHYEVHVNGKPVDPLRYVLP"
BASE COUNT          300 a          606 c          579 g          251 t
ORIGIN      
        1 ggattcatct actacggcgg tgaccgcttc tccaagagcg caggaatacg actcgacctg
       61 cgtgaggcca tcgcccggca cgggccggac gcgctcaggt acttcctgct ccgggaagtc
      121 ggattcgccg gcgacgggaa cttcagctgg gagcggttcg acgagcgtta ccatgccgac
      181 ctcgccgacg ggctgggcaa cctggcgtcc cgctccctgg ccatgatcga gcgctatcgc
      241 ggcggggtgg tgccggacgg cggcgccacc ccgctggacg cagccggcga agcggcgctg
      301 cggacatacg gggcggcaat ggacgccctc gacctcaagg gcggcgccga cgcggcctgg
      361 agcctcgtga cggtcgccaa ccagtacatc gtgcagaccg ctccgtggac cctggccaag
      421 caggggaagg acccggagct cgacgcggca ctggcagcgc tcgcccgcgt cctggtgcgc
      481 ctcggggtga tggcgggacc gttcatgccc ggcaaggccg ccgagctctg gagccacctc
      541 gggcaagatg ccccggttac cgcggcctgg gccctggcga cacagcccga agtcgggggc
      601 aggaaggttc ggaaaccgga gggaatcttt cccaagccga gccaaccaaa tccttgacag
      661 tcaaggagtt gtacgtgtct ttcgacactt gacaccccct ttaccaaggg gcatcttaac
      721 ccgcccagga gtggatccct cgaatccacc cacccgggca cagcttttcc agagtaccac
      781 gtatcgccgt tacatccggc tatcacaacg ccggttaggg gaataggaat gtccgaacgc
      841 aagtggaccc ttgtcgtcgt cccgcccggc tcgagcacct cgaaggtgat cgaggtctcg
      901 cagcgcgtgc tcaagacggc ggtcgggttc ataggcgtgt tcgtcctggt ggcgctgctg
      961 ctgggctacg gcacgatgtc gcgctcgatc gacctgcagc ggtcggcggc actcgagaag
     1021 gagaacgccc ggctggccga ggagcttggc cgcctccatg gcgagatgtc gaccctgtcg
     1081 gacaccctca agaccctcgc cgagcgcgac gcgcgcatcc ggctcctcgc gaacctcgag
     1141 cccaatgatc ccgccgtcca gcaggccggc atcggcggcc cggcagcccc gccggcaaag
     1201 gatgggctcg ccagtgtcgg actgctcggc cagcgggccg aagaggtccg ggtcgacctc
     1261 ggcgcgctga tccgccgggc caacctgctc gccgcgtcgt tcgacgaggc gaccgacagc
     1321 ctcgcacggc accgcgaccg gctggcagcc atgccaagca tcatgccgac caccggctgg
     1381 ctcaccagcg ccttcagctc gatgcgcgaa catcccattc ttcacatcgc ccgcccgcat
     1441 gaagggatcg acgtgaccgc cccgatgggc gccccgatcc aggcgccggc cgggggacgg
     1501 gtgaccaaga ccgggtggga gtcggggtac ggcaacgtga tcgtgatcga ccacggcttc
     1561 gggctcacca ccaagttcgc gcattgctcc aggctggagg cccggaccgg ccagcaggta
     1621 aagcggggcg acgtgatcgc ctacgtcggc aacaccggcc tcgccaccgg accgcacctg
     1681 cactacgagg tgcacgtgaa cgggaagccg gtcgacccgc tgcggtacgt gctgcc
//
LOCUS       DATIFF010000172         8574 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_24937, whole genome shotgun sequence.
ACCESSION   DATIFF010000172 DATIFF010000000
VERSION     DATIFF010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8574
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24937"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1071)
                     /locus_tag="VLD58_02545"
     CDS             complement(<1..1071)
                     /locus_tag="VLD58_02545"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSB53198.1"
                     /translation="MAVVQLSDSFRATLADLAQDLGAELVRWSPTDGEAPPGGSTCVL
                     LLAGGAESQAVDQLSAISTDLPKYVVGAARDHRLAAAALQRGARDYFALPDDLGLLRR
                     SLEREKRESSGKAEAARFAEDERRLAGFDAIVGNSQVLRRTIEQGLRVAQHRDVTVLI
                     GGETGTGKELLARALHYHSPRAAAPFVEINCAAIPANLLESELFGHEKGAFTGAIAAK
                     PGLMELAHGGTVFLDEIGSLPLELQPKLLRALEGREIRRVGGQQTRKVDIRVIGATHV
                     DLKAAVARGEFREDLYYRLNVVTLVLPPLRDRGEDIDLLARTFAARLAKQYGLEVPVL
                     SPQVLSALRARPWPGNVRELRNV"
     gene            complement(1227..2084)
                     /locus_tag="VLD58_02550"
     CDS             complement(1227..2084)
                     /locus_tag="VLD58_02550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53199.1"
                     /translation="MSPNSRLAAVVALTGLLAACSDGSAPTARSQVRFNLATGAATGP
                     AFLSDTVATATDTLVLDSVQLVLRDIKFQRVNEDACDNENEPGDDNGTDSVPHTIRMA
                     SLHDDGGSDDGDDGHADACESFNAGPYLLDVPLDTAVAKAFTIAVDTGTYEQVRFRIH
                     KPEDDGDARDVAFLAAHPDFNKVSIRVVGSFNGQAFTFITDLSAQERMALVPPLVVAD
                     SMQNVDVTIKVDVSKWFSNGAGGLVDPNTGLKGEANENLVKDNIRNSFRAFRDDNRDG
                     EDDDHEGHD"
     gene            complement(2255..3130)
                     /locus_tag="VLD58_02555"
     CDS             complement(2255..3130)
                     /locus_tag="VLD58_02555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HSB53200.1"
                     /translation="MTASTERGIRSAQIGMLVNAALAAVKLVAGVLGNAYALVADAVE
                     SSADIFSSLVVWRGLRIASREANEEYPFGFGKAEPLATAVVALMLLGAAGGIAVEAIR
                     EIRTPHHSPAPFTLVVLVVVVLVKEFLFRKVHTVGSEVGSTAVKADAWHHRSDAITSI
                     AAFIGISIALIGGPGWEMADDWAALFAAGIIVFNAVNLLRPAIDDIMDKSPGPDLEEQ
                     ISQAALATPDVRAIEKLRIRRVGLGYQVDLHVQADPQMSLHDAHILSGRVKSAIRGVL
                     PKADVVLIHMEPHEP"
     gene            complement(3227..3997)
                     /locus_tag="VLD58_02560"
     CDS             complement(3227..3997)
                     /locus_tag="VLD58_02560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53201.1"
                     /translation="MSRSLKLASAAMLAVVGLTACSDSGGPSGGKTVAFQLATRGATA
                     PAVRGPSLLAGTETIALGNDTIVLSSVQVVLRRIELNRVAGGACDSTTTDDSCEELKA
                     GPVLLDLPLGAGAARTFTVAIDTGSYDKLEFKIHAPETSNDAAFIAQHPDFDGVSIKV
                     IGTYNGTPFTYTSDLDVEQEVELVPPITVTDAAGASLTLFVNLDSWFANQTNDGLINP
                     DSANKGGAAEGEVKSNIETSLNAFEDANHDGEDDHGIN"
     gene            4283..4801
                     /locus_tag="VLD58_02565"
     CDS             4283..4801
                     /locus_tag="VLD58_02565"
                     /inference="COORDINATES: protein motif:HMM:NF016840.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HSB53202.1"
                     /translation="MPIARPAADEYAPFYETYVGKVTEPDLVSLLTSQQATTAKFLAG
                     LTETQAAHRYAPGKWSLREVIGHLADSERIFAYRLLRIARADTTPLPGFDENLYVPGG
                     EFERRPLASVAAEFASVRAATLTLLEGTTPEALARMGTASGKPISARALAFIIAGHEK
                     HHLGVIRERYLK"
     gene            4832..6412
                     /locus_tag="VLD58_02570"
     CDS             4832..6412
                     /locus_tag="VLD58_02570"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HSB53203.1"
                     /translation="MKLRTASLAILALAAGCKGEPACTRCDTIVVAATGEPSSLLPPL
                     VVETVGRDISDQLFERLADLAPGGAPVDSTAFRPRLADKWERIDSLSWRFHIRAGARW
                     QDGQPVTARDVAFSFSAYTDSLLDSPASGELRGRVKAEAENEQSVRISFDRYYPEQLY
                     DATWHVRVFPAHIWDGVPRNRWADDTTLSHLVGSGPYRIESWQRGQALTLVSDTSGAP
                     RTRVRRAVWRFASDPEAALNLVLSGEADLMESVGSPERVTRVEQDSLLHAVRYPSAAF
                     GFLGYRVQGNPLLGDRALRRALNQAVDRSSIATAVYGPGAVAPPGPMSKLLWIWDDAI
                     AVLPYDTAAAAHAFDAAGYTRGADGVRHKGSRKVAFDILVPSTSTGRRRLAEALQEQW
                     RQAGVTVTVTAVDFPVFMERLHKGAFDSYIGAWLDEPSARVIPDQWGRGGIGSDNYGG
                     YLNPVVERLFGQAMAEPAPAAARAAWRAALDTLNADAPALFLYTPVQVAAVSRRVENF
                     SIDPYSWLAALSSVTLKP"
     gene            6409..8115
                     /locus_tag="VLD58_02575"
     CDS             6409..8115
                     /locus_tag="VLD58_02575"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HSB53204.1"
                     /translation="MSGSRWRAALLVLAALGCTLERRAPVVPADLVLRHGEVYTMSPA
                     RPWADAVAVRDGRIVYLGEDPGVDKFIGMSTDVIDLGGRLVLPGFQDSHAHPLSGGLE
                     LGECNLYTARTPAEVEGAIRAYVSQRADLKWIRGNGWQLPVFPGANPKRELLDRLVPD
                     RPAFFYSADGHSAWVNSKALELAGITAKTRDPAGGRIERDAAGNPSGTLRESAMDLVS
                     RLLPEYSTQDRIGAARRALAEANRFGITTITDADAGPEYLEAYRALDDQNQLTARVYT
                     AIHVEKNPVEGETSRLVALRRRYSGSRLHADQVKFYADGVIEARTAALLAPYAGHGAE
                     TGSLNYTPEELATRISALDRQGFQIHIHAIGDRAIRVSLDALAQARKDNGHRDARPII
                     AHIELFDPADLPRFREIGVIASFQPYWAQADEYIRDLTLPILGPARSRWLYPIETMLN
                     SGAVVVGGSDWTVSSLNPLDAIQVAITRRSVEEPNGPAWLPEERADLPRMLAAYTINA
                     AYANRAERETGSLELGKLGDLIVLDRNLFAIPPTEIHRAKVLLTLVEGREVYRDTSFA
                     RP"
     gene            complement(8085..>8574)
                     /locus_tag="VLD58_02580"
     CDS             complement(8085..>8574)
                     /locus_tag="VLD58_02580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53205.1"
                     /translation="LGYLVVPPDLLEAVAAAESVSNRHAPTLEQAILCDFMVEGHFAR
                     HIRRMRDIYAERLGVLLESARDRLAGLLDVSDVEAGLQTAGWLGHGITEADAVRAASA
                     RRVEVNALSKYTIGRGGRQGLQLGFAAVDPPEIRRGVKDLALALEPLARPAQGRAKLV
                     SR"
BASE COUNT         1317 a         2947 c         2884 g         1426 t
ORIGIN      
        1 cacgttgcgc agctcgcgca cgttgccggg ccagggccgg gcccggagcg cactcagcac
       61 ctgcggcgac aggaccggca cttcgagccc gtactgcttg gcaagccgcg ccgcgaacgt
      121 ccgcgccagg aggtcgatgt cctcaccccg gtcgcgcagc ggcggcaaca ccagcgtcac
      181 cacgttgagc cggtagtaca ggtcctcacg gaactctccc cgcgcgaccg ccgctttcag
      241 gtcgacgtga gtggccccga tcacccggat atccaccttc cgggtctgct ggccgcccac
      301 ccgccggatc tcccgcccct cgagtgcccg cagcagcttg ggctgcagct cgagcggcag
      361 gctcccgatc tcgtcgagga acaccgtgcc gccgtgggcc agctccatca ggccgggctt
      421 ggccgcgatg gcgccggtga aggcgccctt ctcgtggccg aacaattcgc tctcgagcag
      481 gttggccggg atcgccgcac agttgatctc gacgaacggc gccgccgctc tcgggctgtg
      541 atagtgcaag gccctggcca ggagctcctt gccggtgcct gtctcgcccc cgatcagcac
      601 cgtcacatcg cggtgttgcg ccacccgcaa tccctgctcg atggtccggc gcagcacctg
      661 actgttcccc acgatggcat cgaagcccgc caggcgtcgt tcgtcttccg cgaaccgggc
      721 cgcttctgcc ttgccgctcg actcgcgttt ctccctctcc agcgatcggc gcagcaggcc
      781 gaggtcatcc ggcagcgcga agtagtcgcg cgcgccccgc tgcagtgccg ccgccgccag
      841 ccgatgatcc cgggccgcgc ccaccacgta cttgggcaga tcggtcgaga tggcgctcag
      901 ctgatccacc gcctggctct ccgcgcctcc ggccagcagc agcacgcagg tgctcccgcc
      961 tggtggggcc tcgccatcgg tggggctcca ccgcaccagt tccgcgccga ggtcctgggc
     1021 cagatcggcc agggtggcgc ggaaactgtc ggagagctgc acgacggcca tgtgccatcc
     1081 gggtggactc agtacttcgc tccttgtctg gccgttggcc tttggccgtt agccattagg
     1141 caactcagtg tttcaccggc acatcagccg tcagctggat tgctgcgttc cagctaacgg
     1201 ctaacggcta atggctaaag gccggttcag tcatgcccct cgtgatcatc gtcctcgcca
     1261 tcgcggttgt cgtcgcggaa ggcgcggaag gaattcctga tgttgtcctt gaccaggttc
     1321 tcgttggcct cgcccttgag gccggtgttg ggatcgacca gcccgccggc gccgttcgag
     1381 aaccacttgg agacatcgac cttgatggtc acgtccacgt tctgcatcga gtcggccacc
     1441 accagcggcg gcaccagcgc catccgctcc tgggcgctga ggtcggtgat gaaggtgaag
     1501 gcctggccgt tgaagctgcc gaccacccgg atgctcacct tgttgaaatc ggggtgggcc
     1561 gcgaggaacg ccacgtccct ggcgtcgcca tcgtcttccg gcttgtggat ccggaagcgg
     1621 acctgctcat aggtgccggt gtccaccgcg atggtgaagg ccttcgcgac ggcggtgtcg
     1681 agcggcacgt cgaggaggta gggcccggcg ttgaacgact cgcaggcgtc cgcgtggccg
     1741 tcgtcgccgt cgtcggagcc gccatcatcg tgcagggagg ccatgcggat ggtgtgcggg
     1801 acgctgtcgg tgccgttgtc atcgcccggc tcgttctcgt tgtcgcaggc gtcttcgttg
     1861 acccgctgga acttgatgtc gcgcagcacc agctggacgc tgtcgagcac cagggtgtcg
     1921 gtggcggtgg caacagtatc ggacaggaat gccgggccgg tggcggcgcc ggtcgcgaga
     1981 ttgaagcgaa cctggctccg ggcggtgggc gcggaaccgt cgctgcaggc agccagcagg
     2041 ccagtcaggg caaccacggc cgccagtcgg gaattcggac tcatgtgcat catctcctgc
     2101 gggggttcga gaggaggaac ttccctgttc tgcccccggg aatggcaagc caaatgccgt
     2161 tgaggctagt cggctaaact gtttactacc aataacttaa tcgtgacgcc agaatgtcgc
     2221 caccgtatca tggcgagtgg tctgctacga atcgttacgg ctcgtgtggc tccatgtgaa
     2281 tcaggaccac atcggccttg ggcaggacgc cccggatcgc cgacttcacc cggccgctca
     2341 ggatgtgcgc gtcgtggagg ctcatctggg gatcggcctg cacgtggagg tccacctggt
     2401 agcccagccc gacccgccgg atccggagct tctcgatggc ccggacgtcg ggagtggcca
     2461 gggccgcctg gctgatctgt tcctcgaggt caggccccgg actcttgtcc atgatgtcgt
     2521 cgatggcggg gcggagcagg ttcaccgcat tgaagacgat gatgccggcc gcgaacaacg
     2581 cggcccagtc gtccgccatc tcccatcccg gtccgccaat cagggcgatg ctgatgccga
     2641 tgaaggccgc aatcgaggtg atcgcatcgc tccggtgatg ccaggcgtcg gccttgaccg
     2701 cggtactccc cacctcgctc ccgacggtgt gcaccttccg gaagaggaac tccttcacga
     2761 gcaccacgac caccagcaca accagggtga acggggcggg gctgtgatgc ggagtgcgga
     2821 tttcgcggat tgcctcgacc gcgatgccgc cggccgcccc gaggagcatg agggccacca
     2881 cggcggtcgc cagcggttcg gccttgccga agccgaaggg gtattcctcg ttggcctcgc
     2941 gcgacgcgat ccggaggcca cgccagacca cgagcgaaga gaaaatgtcg gccgaggatt
     3001 cgaccgcgtc ggcaaccagg gcgtaggcgt tgccgagaac accggcgacc agcttcaccg
     3061 ccgccagggc ggcgttcacc agcatgccga tctgggcgga ccggataccc cgctctgtcg
     3121 acgcggtcat ggcgggaaga tactggcggc ggatgacagt cgcatgaagg ccaacggggc
     3181 ccggcgcgct ggcgccggac cccgtggctg agtgaccccg ttcgggtcag ttgatgccgt
     3241 gatcgtcctc gccgtcgtga ttcgcgtcct cgaaggcatt gagtgacgtc tcgatgttgc
     3301 tcttgacctc accctcggcc gcgccgccct tgttggcgga gtccggattg atgagcccgt
     3361 cgttggtctg attcgcgaac cagctgtcga gattcacgaa cagggtcagg ctggcgccgg
     3421 cggcgtcggt gaccgtgatc ggtggcacca gctcgacctc ctgctccacg tcgagatcgg
     3481 aggtgtaggt gaacggagtg ccattgtagg tgccgatcac cttgatgctc acgccatcga
     3541 aatcggggtg ctgggcgatg aacgccgcgt cgttcgaggt ctccggtgcg tggatcttga
     3601 actccagctt gtcatagctg ccggtgtcga tcgccacggt gaaggtgcgc gccgcgcccg
     3661 cgcccagggg caggtcgagc agcaccgggc cggccttgag ctcctcgcag ctgtcatcgg
     3721 tcgtggtgct gtcgcaggcg ccgcctgcca cccggttgag ctcgatccgg cgcagcacca
     3781 cctgcacgct gctcagcacg atggtgtcgt tgccgagcgc gatcgtttcg gtgccggcga
     3841 gaagggaggg cccccgcacc gcgggggcgg ttgcgccccg ggtggcgagc tggaaagcga
     3901 cggtcttgcc gccgctgggg ccgccggaat cgctgcaggc ggtcaaaccc accacggcga
     3961 gcatggcggc gctggccaac ttgagagaac gagacattgt cagactccga gtcaaaggtt
     4021 ccgtgttcga gtggactgct cggggcctgt acaaggcaaa cgaagggccc aagccgggcc
     4081 aatgttccga ctcgttgcag cagcgggagt tatcgaccga atgagagcca gatcacatgg
     4141 ccggcgggcg cttcttttcg atccagtcgc gatgtttcgt tgcgggcgac cggcttcatg
     4201 aagtcgggtt gcgacggagc gtcgctaccg cttatctcca tgcagcgcag ccccgcttcc
     4261 gcaccatcca ggacgaattg ccatgccgat cgcacgcccc gcggccgacg agtacgcccc
     4321 cttctacgag acctacgtcg gcaaggtcac cgagccggac ctggtgtcgc tgctcacctc
     4381 ccagcaggcc accaccgcga agttcctggc cggcctcacc gagacccagg cggcccaccg
     4441 ttacgctccc gggaagtgga gcctccgtga agtcatcggc catctggccg attccgaacg
     4501 gatcttcgcc taccgcctgc tccggatcgc gcgggccgac accacgccgc tgcccggttt
     4561 cgacgagaac ctctacgtgc ccggcggtga gttcgagcgc cggccgctgg cgtcggtggc
     4621 cgccgagttc gcctcggtac gcgcggcgac gctgacgctg ctcgagggga cgacgcccga
     4681 ggcgctggcc cgtatgggca ccgcgagcgg caagccgatc tccgcccggg cgctggcgtt
     4741 catcatcgcc gggcacgaga agcatcatct cggcgtgatc cgggaacggt atctcaagta
     4801 gttgcccact catcgacctc cgggagtcga cgtgaagctc cgaaccgcgt ccctggcgat
     4861 cctggcgctg gccgccgggt gcaagggaga gcccgcctgt acccgctgtg ataccatcgt
     4921 ggtcgccgcc accggagagc cttcctccct gctgccgccg ctggtggttg agacggtggg
     4981 ccgggacatc tcggaccagc tcttcgaacg gctcgccgat ctggccccgg gcggagcgcc
     5041 ggtggacagc accgcgttcc gtccccggct ggccgacaag tgggaacgga tcgacagcct
     5101 ttcctggcgc ttccatatca gagcaggcgc ccgctggcag gatggccagc ccgtcaccgc
     5161 ccgggatgtg gccttctcct tctcggctta caccgattcg ctactcgaca gccccgcctc
     5221 gggagagttg cggggccggg tgaaggccga ggccgagaac gagcagtcgg tccggatcag
     5281 cttcgaccgg tactatcccg agcagctcta cgacgcgacc tggcatgtcc gggtcttccc
     5341 ggcccacatc tgggatggcg tgccgcggaa ccgctgggcc gatgacacca ccctgagtca
     5401 cctggtgggc tccggtccct accggatcga gagctggcag cggggtcagg cgcttaccct
     5461 ggtgagcgac accagcggcg ctccccgcac ccgggtgcga cgggcggtgt ggcgcttcgc
     5521 gagcgatccg gaagccgcgc tcaacctggt gctgagcggt gaggccgatc tcatggaatc
     5581 ggtcggctca cccgagcggg tgacccgggt ggagcaggat tccctgcttc acgccgtgcg
     5641 ctatccctcc gccgcgttcg gcttcctcgg ctaccgggtg caggggaatc ccctgctggg
     5701 tgaccgggcg cttcgccggg ccctcaatca ggcggtcgac cgttcgtcga tcgcgaccgc
     5761 cgtgtacggc cccggtgcgg tcgcgcctcc cggaccgatg tcgaagcttc tctggatctg
     5821 ggacgatgcg atcgcggtgc tgccgtacga cacggctgct gccgcccatg ccttcgacgc
     5881 ggcggggtac acgcgtggag ctgacggggt ccgtcacaag ggcagccgca aggtggcgtt
     5941 cgatatcctc gtgccctcca ccagcaccgg ccgccgccgg ctggccgagg cgctgcagga
     6001 gcagtggcgc caggccggcg tcaccgtcac cgtcaccgcg gtcgactttc cggtgttcat
     6061 ggaacggctc cacaagggcg ccttcgacag ctacatcggc gcctggctcg atgagccgag
     6121 cgcccgggtg atcccggatc agtggggaag gggcggcatc gggagcgaca actacggcgg
     6181 gtacctcaat ccggtcgtgg agaggctctt cgggcaggcc atggcggaac cggcgcccgc
     6241 ggcagcccgg gccgcctggc gggccgcgct cgatacgctc aatgccgatg cgccggcgct
     6301 ctttctctat accccggtgc aggtggcagc ggtgtcgcgc cgggtggaga acttctcgat
     6361 cgatccgtat tcctggcttg ccgccctctc cagcgtgacc ctcaagccat gagcgggagt
     6421 cgctggcgcg ctgccctcct cgtccttgcc gcgctgggct gcaccctcga gcggcgcgcg
     6481 ccggtcgtgc ccgccgatct ggtactccgc cacggcgagg tctacaccat gtcgccggcc
     6541 cggccctggg ccgacgcggt cgcggtgcgc gacggccgca tcgtctacct cggcgaggat
     6601 cccggagtcg acaagttcat cggcatgtcc accgacgtga tcgacctcgg cggccggctg
     6661 gtgctcccgg ggtttcagga ctcgcacgcg cacccgctct ccggcggtct cgaactgggg
     6721 gagtgcaacc tctacacggc ccgcactccc gccgaggtgg agggggcgat ccgggcctac
     6781 gtgtcccagc gtgccgatct caagtggatt cgtggcaacg gatggcagct gccggtcttt
     6841 cccggcgcca acccgaagcg cgagctgctc gaccggctgg tgccggaccg tccggccttc
     6901 ttctattccg cggacggcca ttcggcctgg gtgaacagca aggccctgga actggcgggg
     6961 atcaccgcca agacgaggga cccggcgggt gggcggatcg agcgggacgc cgcggggaat
     7021 cccagcggga cgctgcggga gtcggcgatg gacctggtct ccagactcct gccggagtac
     7081 agcacccagg accggatcgg ggcggcgcgg cgggcgctgg cggaggcgaa ccgcttcggc
     7141 atcaccacga tcaccgatgc cgatgccggc ccggaatatc tggaggccta ccgtgcgctg
     7201 gacgatcaga accagctcac ggcgcgggtg tacacggcga ttcatgtgga gaagaacccg
     7261 gtcgaggggg agaccagccg gctggtggcg ctccgccggc gctattccgg gtcgcggctc
     7321 catgccgatc aggtgaagtt ctacgccgat ggcgtgatcg aggcacggac cgccgcgctg
     7381 ctcgcgccct acgccggtca tggggcggag acggggtcgc tcaactacac gcccgaggag
     7441 ctcgccaccc ggatcagcgc cctcgaccgg cagggattcc agatccacat ccatgccatc
     7501 ggagaccggg cgatccgggt gagcctcgac gcgctggcgc aggcgcggaa ggacaacggc
     7561 caccgtgacg cccgtccgat catcgcccac atcgaactgt tcgatccggc cgaccttcca
     7621 cgattccggg aaatcggcgt gatcgcgagc ttccagccct actgggccca ggccgacgag
     7681 tacatccgcg atctcactct cccgatcctt ggcccggccc gctcccgctg gctctacccg
     7741 atcgagacga tgctcaacag tggcgccgtg gtggtgggcg ggagcgactg gactgtctcc
     7801 agcctgaatc ccctggatgc gatccaggtc gcgatcaccc ggcggagcgt cgaggagccc
     7861 aatggaccgg cgtggctgcc ggaggagcgg gccgacctgc cgcggatgct cgcggcgtat
     7921 acgatcaatg cggcctacgc caaccgggcc gaacgtgaga ccggatcgct ggagctgggc
     7981 aagctcggtg acctgatcgt gctcgaccgc aatctcttcg ccatcccccc gaccgagatc
     8041 caccgggcca aggtgctcct caccctggtg gaagggcgcg aggtctatcg cgacacgagc
     8101 ttcgcgcgcc cctgagcggg gcgcgccagc ggctcgaggg ccagggccag gtctttcacg
     8161 ccccgcctga tctccggtgg atctaccgcc gcaaacccaa gctgcagccc ctgccgcccg
     8221 ccacgcccga tggtgtactt cgacagtgcg ttcacctcta ccctccgggc gctggctgcg
     8281 cgcaccgcgt ccgcttcggt gataccatgc cccagccacc ccgccgtttg aagccccgcc
     8341 tccacatccg acacgtcgag cagccctgcc agccggtccc gcgctgactc gagcaggacc
     8401 ccgagtcgct cggcgtagat gtcgcgcatg cggcggatgt gccgcgcaaa gtgcccctcc
     8461 accatgaagt cacagagaat cgcctgctcc agggtgggcg catggcgatt gctcaccgat
     8521 tcggcggccg cgacggcttc gagcaggtcg ggagggacca cgaggtaccc gagc
//
LOCUS       DATIFF010000173         2138 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_332562, whole genome shotgun sequence.
ACCESSION   DATIFF010000173 DATIFF010000000
VERSION     DATIFF010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2138
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_332562"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            255..893
                     /locus_tag="VLD58_02585"
     CDS             255..893
                     /locus_tag="VLD58_02585"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HSB53206.1"
                     /translation="MDWLIRSGIKPNTITTFGTGLVLLSALAYGVGAIRWGGLLLLLS
                     GVVDTLDGQVARGGAMVTKFGAFYDSTLDRIGDGATFIGIGAFLLTAPDVAYRLPAII
                     TCMVAVLASLLVSYARARAEGLGIECKVGIAQRAERIVGLGGASLLVGAGPHALVIEA
                     IVALLAAASIITVVQRFVYVHRHAEGRAPEMVVRVAEGASKQRALDSLAKGS"
     gene            896..>2138
                     /locus_tag="VLD58_02590"
     CDS             896..>2138
                     /locus_tag="VLD58_02590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-3-phosphate synthase"
                     /protein_id="HSB53207.1"
                     /translation="MADHQARTIAPASGKLGVLCVGLGAVASTFIAGVENVRRGRARP
                     IGSLTQMGTIRLGKRTEGRAPLIKDFVPLAGLADLVFGAWDPIPDDCYTACVRAGVLD
                     RHEHVEPIAEFLKSIKPMPAVFDQAYVKRLQGTNVKKAKTKRDLAEQLRADIRDFKAR
                     ARCDRLVIVWCASTEIFISPGPAHWTLEAFEKAMDANDPSIAPSMLYAWAALMENVPF
                     ANGAPNLTCDFPALEQLAKSRGIAIGGKDFKTGQTMVKTVLSPMFKARMLGVAGWYST
                     NILGNRDGEVLDDPESFKTKEESKLGVLEYILQPQLYPELYGSIYHKVRINYYPPRGD
                     NKEGWDNIDIFGWLGYPMQIKVDFLCRDSILAAPMVLDLALFFDLAQRAGLTGIQEWL
                     SFYFKSPQTAPGLYPEHDLFIQ"
BASE COUNT          334 a          706 c          730 g          368 t
ORIGIN      
        1 tcgaacggcg ccggaccccg tatctgctgt accggtagtc gctggcgcaa ggctaacggc
       61 tagcgcctca aggcttagcg gccttccgct cgtccctcac cgctcccaat agccaaaagt
      121 cgttccgccg gttatagttt cgcggcgttt tcggggctgg tgagcccctt cactctggcc
      181 cggccgagga gcgacacccg ctgaagccgc tggacgccct ggagcggccg ttctacgccg
      241 ccgttcgccc gctggtggac tggctgattc ggagcggcat caagcccaat accatcacga
      301 cgttcggcac cggcctggtg ctgctttcgg ccctggccta cggcgtcggt gccatccggt
      361 ggggggggct gctcctgctt ctgagcgggg tggtcgacac gctcgacggg caggtggccc
      421 gcggcggcgc gatggtgacg aagttcgggg ccttctacga ttcgacgctc gaccggattg
      481 gggatggggc cacgttcatc ggcatcgggg cctttctgct caccgcgccc gacgtggcgt
      541 accgactgcc ggcgatcatc acctgcatgg tggcggtcct cgcctccctg ctggtttcct
      601 atgcgcgggc gcgggcggag ggcctcggca tcgagtgcaa ggtcgggatc gcccagcggg
      661 cggagcgaat cgtcgggctc ggcggggcgt cgcttctggt gggcgccggg ccgcacgcgc
      721 tggtgatcga ggcgatcgtg gccctgctcg ccgcggcgtc gatcattacg gtggtgcagc
      781 gcttcgtcta cgtccaccgg catgcggaag gccgcgcccc ggagatggtc gtgcgtgtgg
      841 cggagggggc ctccaagcag cgggccctcg attctctcgc gaaaggatcc tgagcgtggc
      901 ggaccatcag gcgcggacga tcgcgccggc cagcggcaaa ctgggtgtgc tctgcgtggg
      961 actcggggcg gtcgcctcga cattcatcgc cggcgtggag aacgtgcgcc gcggcagggc
     1021 tcggccgatc ggctcgctca cgcagatggg gaccatccgg ctgggcaagc ggaccgaagg
     1081 ccgggcgccg ctcatcaagg atttcgttcc gctcgccggt ctcgcggatc tggtctttgg
     1141 cgcctgggac ccgatcccgg acgactgcta cacggcctgt gtgcgggcgg gcgtgctcga
     1201 ccgccacgag catgtggagc cgatcgcgga gttcctcaag agcatcaaac cgatgccggc
     1261 ggtcttcgat caggcgtatg tcaagcggct ccagggcacc aacgtcaaga aggccaagac
     1321 caagcgggac ctggccgagc agctcagggc cgacatccgc gacttcaagg cgcgggcccg
     1381 gtgcgaccgt ctggtcatcg tttggtgcgc atccaccgag atcttcatca gcccgggccc
     1441 ggcgcactgg acgttggagg cgttcgagaa ggcgatggac gcgaacgacc cgtcgatcgc
     1501 gccctccatg ctgtacgcat gggccgccct catggagaac gtcccgttcg ccaacggcgc
     1561 cccgaacctc acctgcgact tcccggccct ggagcagctc gccaagagcc gcggcatcgc
     1621 gatcggcggg aaggacttca agaccggcca gacgatggtg aagaccgtcc tctcgcccat
     1681 gttcaaggcg cggatgctcg gcgtggccgg ctggtactcc acgaacatcc tgggtaaccg
     1741 ggacggcgaa gtgctcgacg acccggagag cttcaagacg aaggaggagt cgaagctcgg
     1801 cgtgctcgag tacatcctcc agccccagct ctaccccgag ctctatggga gcatctacca
     1861 caaggtgcgg atcaattatt acccgccgcg gggtgacaac aaggaagggt gggacaacat
     1921 cgacatcttc gggtggctcg gctacccgat gcagatcaag gtggacttcc tctgccggga
     1981 ctccatcctg gccgctccga tggtgctcga cctcgcgctc ttcttcgacc tcgcccagcg
     2041 agcggggctg acggggatcc aggagtggct gtccttctac ttcaagagcc cccagacggc
     2101 gccggggctc tatcccgagc acgacctctt tatccagc
//
LOCUS       DATIFF010000174         1920 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2025643, whole genome shotgun sequence.
ACCESSION   DATIFF010000174 DATIFF010000000
VERSION     DATIFF010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1920)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1920
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2025643"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..287)
                     /locus_tag="VLD58_02595"
     CDS             complement(<1..287)
                     /locus_tag="VLD58_02595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53208.1"
                     /translation="MTRSPSNGGEAPVALSEVLRTEYAALHSREKTQELDQELERPEE
                     DQGKERPPSEIERRRRFWAHIHKGGDRSALCLSGGGIRSATFNLGVLQALA"
     gene            complement(448..1344)
                     /locus_tag="VLD58_02600"
     CDS             complement(448..1344)
                     /locus_tag="VLD58_02600"
                     /inference="COORDINATES: protein motif:HMM:NF013046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase"
                     /protein_id="HSB53209.1"
                     /translation="MPVPVFTHPDCIRHDPGPDHPETPARLAVTLSRLARDPRAEIRQ
                     ATPGQREDLLLVHPEGHLVRLEEMSRHGGGVLSLDTTMNEASWAAVLAATGAIAAAID
                     SALAGSGHAFAAVRPPGHHALAQRAMGFCLVNNVMVGARRAQRMGRQRVLIIDWDVHH
                     GNGTQALMEQDATIRYVSLHQHPWYPGTGMADERGVGNVFNVPRGPGAPAERYVEDLW
                     AAVISSTEAWTPDLVLVSAGYDAMRGDPLGGFTLEPQHYGTLTARLRELIPGCPIVGL
                     LEGGYVPERVAAGVAATVAALG"
     gene            complement(1348..1632)
                     /locus_tag="VLD58_02605"
     CDS             complement(1348..1632)
                     /locus_tag="VLD58_02605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53210.1"
                     /translation="MTTPTSPRPVRGRIATFVAVGCLTLDGVLLALAGLWSSRYGLLA
                     GGGVCLALAIAILFLWRRQRERMQELQAARREVADEARALRELVRKPPAP"
     gene            complement(1629..>1920)
                     /locus_tag="VLD58_02610"
     CDS             complement(1629..>1920)
                     /locus_tag="VLD58_02610"
                     /inference="COORDINATES: protein motif:HMM:NF020396.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EsaB/YukD family protein"
                     /protein_id="HSB53211.1"
                     /translation="VPFHAAAGGERMSALPVRVMVQDAWDQVNLELPATATVQELKQR
                     ALALTHQVGKPEEYQVKFRGAAVLDEERSLAETGVVPNAALIVMPRRRRPVR"
BASE COUNT          295 a          701 c          655 g          269 t
ORIGIN      
        1 tcggccagcg cctggagaac accgagattg aacgtggcgc ttcggatccc accccccgag
       61 aggcagagcg cactccggtc gccgcccttg tggatatggg cccagaaccg ccgccggcgc
      121 tcgatctcgc tgggggggcg ctccttgccc tggtcctcct cgggccgttc gagctcctgg
      181 tcgagttcct gggtcttctc gcgcgaatgc agggcggcgt attcggtgcg caacacctcc
      241 gaaagcgcca ccggagcctc gccaccgttg gagggggatc gagtcatgct gagcctcgag
      301 cgcggaggga agccggacgt ggaagggtgc gccaccaata ggcagcgcgt gcctgccccc
      361 gtcaagtctc cgcctaacca gagccggtgg actggtagtt agctctgtgt gaaatctgga
      421 acggacgggg cctgcggcag gtatttccta gccgagcgcc gccactgtcg cggcaacacc
      481 cgccgccaca cgctcgggga catacccacc ctcgaggaga ccaacgatgg gacagccggg
      541 aatcagctcc cgcagccggg cggtgagggt cccgtaatgc tgcggctcga gggtgaaccc
      601 gcccagcggg tcgccccgca tcgcgtcata gccggcggag acaagcacca gatcgggggt
      661 ccacgcctct gtcgacgaga tcaccgcggc ccagagatcc tcgacatacc gctcagccgg
      721 tgctccgggc ccccgcggca cgttgaagac gttgcccact ccgcgctcat cggccatccc
      781 ggttccgggg taccagggat gctggtgcag cgatacgtag cggatcgtgg cgtcctgctc
      841 catcagcgcc tgggtcccgt tcccgtgatg cacatcccag tcgatgatca gcacccgctg
      901 gcgccccatc cgctgggccc gccgggcacc caccatcaca ttgttgacca ggcagaaccc
      961 catggcccgc tgcgccaggg cgtgatgccc cggtggccgc accgcggcaa aggcgtggcc
     1021 cgaccccgcc agggcggaat cgatcgcggc ggcaatggcg cccgtggccg ccagcaccgc
     1081 ggcccagctc gcctcgttca tcgtcgtgtc gagggagaga acccctccac cgtggcggct
     1141 catctcctcg agcctcacca ggtgcccttc gggatgcacc agcaggaggt cttctcgctg
     1201 ccccggcgtc gcctgccgga tctcggcccg gggatcgcgc gcgagccgtg aaagcgtgac
     1261 cgccagccgg gccggcgtct ccgggtgatc agggccgggg tcgtgacgga tgcagtcggg
     1321 atgggtgaag acggggaccg gcatggctca gggcgccggc ggcttccgca ccagctcgcg
     1381 cagggcgcgc gcctcgtccg ccacctcgcg gcgggcggcc tggagttcct gcatccgctc
     1441 ccgctgccgg cgccagagga agaggatggc gatggccagc gccaggcaga cccccccgcc
     1501 ggccagcagc ccgtagcggc tgctccagag cccggcgaga gccaacagaa cgccgtcgag
     1561 cgtgaggcac ccgacggcga cgaacgtggc gatccggccg cgaaccgggc gcggcgacgt
     1621 gggcgtggtc aacgcaccgg gcgccggcgg cggggcatca cgatgagcgc ggcgttcggc
     1681 accacgccgg tctctgccag cgaacgctcc tcatccagca cggcggcgcc ccggaacttc
     1741 acctggtact cctcgggctt ccccacctgg tgggtcagcg ccagcgcccg ctgcttgagc
     1801 tcctgcaccg tggcggtcgc cgggagctcg agattcacct ggtcccacgc atcctgcacc
     1861 atgacccgga ccggcagggc gctcatgcgt tcccctcccg cggcagcgtg gaaaggaacc
//
LOCUS       DATIFF010000175         2831 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2179232, whole genome shotgun sequence.
ACCESSION   DATIFF010000175 DATIFF010000000
VERSION     DATIFF010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2831
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2179232"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..872
                     /locus_tag="VLD58_02615"
     CDS             <1..872
                     /locus_tag="VLD58_02615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53212.1"
                     /translation="WSASYEVVLAGRDPARITGRAVVNGGPLNIEDAELQLLAGQVSA
                     VPATPNYAPRAEAALMAKRAVGEMTPSEQKVGEFHLYSLPGRASLVPGRTETIGLFEP
                     TSAKVTRSFQVTGQIPYWGGLSQFGEEEEVPVTVTYTVLRPRKTDLGDRPLPGGTVRL
                     YEPDSAGRVQLIGESAIDHSPAGEDLRLNAGTAFDLTAKRIQTNYSTRRDSLPTGGCC
                     RTVATADYKVTLSNAGDQPATVEVVETRGGEWSIVSSSVKPEKLSSTRTSFKVPVPAK
                     GKATLTYRVRVIW"
     gene            869..1702
                     /locus_tag="VLD58_02620"
     CDS             869..1702
                     /locus_tag="VLD58_02620"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSB53213.1"
                     /translation="MSDVVVAHISDLHFGGRADPPQLAALAKFLPSLAPGVIVISGDI
                     TQRARHGEFQAARWFFEQLAPIAPLYIIPGNHDVQWWRSPMSILGATPKYGKYRTYFG
                     RDLSPVLELDGVIIAGLLTSHGVSPGSVTWNPNDTAVVGHLPASEVARVRARFSTVPP
                     GTVRLAVMHHNVIPGPISHRWGLARPRAAQRALLTLDADAILCGHDHTEAAGQIDGRL
                     AVSTAGTLSLRSRGGRPSAFNLVRVTPREISIQHYIYHREGATFGPGDTTIYARARRA
                     V"
     gene            1677..2447
                     /locus_tag="VLD58_02625"
     CDS             1677..2447
                     /locus_tag="VLD58_02625"
                     /inference="COORDINATES: protein motif:HMM:NF021759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT-like domain-containing protein"
                     /protein_id="HSB53214.1"
                     /translation="MPGLAEQFELVFEWASELAGQLAGQPRRRKVPVPPSPPPARNGS
                     PGEQLISRLKGLGLPSFREIATHRNEQVMLSWVPGKVLRIHEGYAGASDEVLLAIVRF
                     VTPGIRRATRLAARRVFLGFPVEDHAPRPPRPTRRFRVAPQDRPAHERLTQLFAELNA
                     MHFQGTLPEIPIRISGRMRTRLGELRLDRRTGRAVHIGISRRHIRRDGWTSVTDTLLH
                     EMVHQWQAESGGPVDHGRRFREKARAVGIEPRAVRRDW"
     gene            2633..>2831
                     /locus_tag="VLD58_02630"
     CDS             2633..>2831
                     /locus_tag="VLD58_02630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSB53215.1"
                     /translation="MPTFSSPDFYDLDSLLSEEERAVRQTVRAWVDEHLMPIIGDCYV
                     TGRFPRELVPGMAELGVLGANL"
BASE COUNT          442 a          986 c          944 g          459 t
ORIGIN      
        1 gctggtcggc gagttacgag gtggtactgg ccgggcgcga tccggcccgg atcacggggc
       61 gcgcggtggt gaacggcggt ccactcaaca tcgaggatgc cgagctccag ctgctcgccg
      121 gtcaggtgag cgcggtaccg gccaccccca actacgctcc ccgcgccgag gcggcgctca
      181 tggccaagcg ggcagtaggg gaaatgacgc cctcggagca gaaagtgggc gagtttcatc
      241 tctacagcct gccgggccgc gcctcgctgg taccgggccg caccgagacg atcggcctct
      301 tcgagccgac cagcgccaag gtcacccgca gcttccaggt gaccggacag attccctact
      361 ggggcgggct gtcccagttc ggcgaggaag aagaagtgcc ggtgacggtg acctacaccg
      421 tgctccgtcc ccggaagacc gatctgggcg accggccgct gccgggcggc accgtccgcc
      481 tctacgagcc ggacagcgcc ggccgggtgc agctcatcgg ggagtcggcg atcgatcact
      541 cgccggccgg cgaggacctg cggctcaacg ccggcaccgc cttcgacctc accgccaagc
      601 ggatccagac caactactcc acccgacgcg attcgctgcc gaccgggggg tgctgccgga
      661 ccgtggccac cgccgactac aaggtgaccc tcagcaacgc gggcgatcag cccgcgacgg
      721 tcgaggtggt cgagacccgg gggggcgagt ggagcatcgt ctcgagcagc gtcaagccgg
      781 agaagctctc cagcacccgc acctccttca aggtgccggt gccggccaag ggcaaggcca
      841 cactcacgta ccgggtccgg gtcatctggt gagcgacgtc gtcgtcgcgc acatctccga
      901 tctccatttc ggcggccgcg ccgatccgcc ccagctcgcg gcgctggcga agtttctccc
      961 ttcgctggcg ccgggggtca tcgtcatttc gggcgacatc acccagcggg cccggcacgg
     1021 cgagttccag gccgcgcggt ggttcttcga gcagctcgcg ccgatcgcgc cgctctacat
     1081 cattcccggc aatcatgatg tgcagtggtg gcggagcccg atgagtatcc tgggtgccac
     1141 gcccaagtac gggaagtacc ggacctattt cgggcgggac ctgtcaccgg tgctcgagct
     1201 cgacggggta atcatcgcag gtctgctcac ctcgcacggg gtctcgcccg gctcggtgac
     1261 ctggaatccg aacgacaccg cagtggtggg gcatctccct gccagcgagg tggcgcgggt
     1321 gcgggcccgg ttcagcaccg tcccgcctgg cacggtgcgg ctcgctgtga tgcatcacaa
     1381 tgtgattccc ggcccgattt cccatcgctg gggtctggcc cggccccggg cggcccagcg
     1441 cgcgctcctc acgctcgacg ccgacgccat tctctgcggg catgatcaca ccgaagctgc
     1501 cggacagatc gacggccgcc tcgcggtaag caccgccggg acgctctcgc tccggagccg
     1561 tgggggccgc ccttccgcgt tcaacctggt gcgggtgacg ccgcgcgaga tcagcattca
     1621 gcactacatc tatcaccggg aaggcgcgac cttcggtccc ggtgacacga cgatctatgc
     1681 ccgggctcgc cgagcagttt gagctggtgt tcgagtgggc cagtgaactg gcgggccagc
     1741 tggccggcca gccgcgtcgg cggaaggtcc cggtcccgcc atcgcctcca cccgcccgga
     1801 acggctcccc cggcgaacag ctgatttccc ggctcaaggg gctcggcctt ccttcattcc
     1861 gcgagattgc cacccaccga aacgaacagg tcatgctgtc ctgggtgccg gggaaggtgc
     1921 tccggatcca cgagggttac gccggcgcct ctgacgaggt gctcctggcg atcgtgcggt
     1981 tcgtgacgcc cgggatccgg cgcgctaccc ggctcgccgc cagacgggtg ttcctggggt
     2041 tcccggtcga ggatcacgcg ccccgtccgc ctcggcccac ccgccgattc cgggtggcgc
     2101 cccaggatcg cccggcccac gagcgcctga cgcagctctt tgccgaactc aacgcgatgc
     2161 atttccaggg gacgctgcca gagatcccca tccgcatctc cggccggatg cgcacccggc
     2221 tgggtgaact ccggctcgat cgccgcactg ggcgcgcggt ccatatcggg atctcccgcc
     2281 gccacatccg ccgggatggg tggacctcgg tgaccgacac gctgctccac gaaatggttc
     2341 accagtggca ggcggagtca ggcggtccgg tggatcacgg gcggcgcttc cgggagaagg
     2401 cgcgggcggt ggggatcgaa ccgagagcgg tacgcagaga ctggtaagct ctgaacggct
     2461 taccacagat gcgcacagat ggaaacggat tccactccaa tgaacgaccg gagttcgcag
     2521 ttcggcccct gggttttgca gaactgcgca catccgttcc catctgtgtt gatctgtggt
     2581 agtcggttgt agggtccagc gtataccagc gtgccggata tattgattgc ctatgccgac
     2641 cttctcctcc cccgacttct acgatctcga ctccctcctg tccgaggagg agcgcgcagt
     2701 ccgccagacg gtacgcgcct gggtcgacga gcacctgatg ccgatcatcg gggattgcta
     2761 cgtcaccggc cgcttcccca gggagctggt cccgggcatg gccgagctgg gggtgctggg
     2821 cgccaatctc c
//
LOCUS       DATIFF010000176         3142 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1410245, whole genome shotgun sequence.
ACCESSION   DATIFF010000176 DATIFF010000000
VERSION     DATIFF010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3142
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1410245"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..303)
                     /locus_tag="VLD58_02635"
     CDS             complement(<1..303)
                     /locus_tag="VLD58_02635"
                     /inference="COORDINATES: protein motif:HMM:NF013703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HSB53216.1"
                     /translation="MTARHHWWTNVRDALRGGHHDYTSGPLGRAIILLAVPMVMEMIM
                     ESIFAVVDVFFVSRLGPDAVATVGLTESMLTMIYTVAMGLSIGVMATVARRIGEQRP"
     gene            725..1936
                     /locus_tag="VLD58_02640"
     CDS             725..1936
                     /locus_tag="VLD58_02640"
                     /inference="COORDINATES: protein motif:HMM:NF021523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2252 family protein"
                     /protein_id="HSB53217.1"
                     /translation="MSGEDVTDRILRYNAGRDPERLARKFAAMRATPFTFFRATAHLF
                     YEARDLLDPVADAPAVWSSGDVHLENFGCYKGDNGLAYFDLNDFDEAGLAPLTWDLVR
                     LVASALIGAGPGRLSPADRTDIARTMLTYYREHLREGKARWIERATAEGPVRQLLRQA
                     KRRTRRALLSDRTQRAGRARVFRLEPGRHHPAPATEHRGVKALLKRVGREHGDPVFYK
                     ARDVVRRVAGMASLGTPRFAVLVEGRGSPNNNYLLDLKEAIPSTLAAASPVKQPHWAS
                     EADRVVTVQNWVQAVSPALLTPVRWGRHSLVLRELQPTADRLRAAQWRLRGEELDHLI
                     RAVTGVTAWGHLRAAGRRGADGIDQLIAFGESRRWRYPVLAAARAMARRTLEEWNAFR
                     ASDSAPAQLGQ"
     gene            complement(1910..>3142)
                     /locus_tag="VLD58_02645"
     CDS             complement(1910..>3142)
                     /locus_tag="VLD58_02645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53218.1"
                     /translation="RSSDLLALFHQADSLATLSGDAALQRDLSCSYANQLNDSNQPDS
                     ARTMVHAALAELRQERHPDRRALASCLYVAAQLVPDSLPDSSLALLRTSLAELDSAGA
                     LVTLQAATVYNQLANHVEDGGDPRRALVLYQQATDVMDSIGYSETFSAIALLSNRYNV
                     LSRLGELEKGLAATREAARRVDLSDPGTTHPVVGYQHAQALFNTGEPDSAIVWYQRVI
                     AVANANGMRDVSRRAWIGIGRAASRTGDFALARRALDSVVAIARQVKRPAARDSLFLA
                     GSIALGQGQSRAAADAFVAALTVDGFFAGKRNEGMRPPLLEASQALVALGQPDSALTL
                     ATAAEEISAVDSIARKGSAYVGESKLRQGQALMALGRKDEARARVTEALAALRSGAGE
                     GHPRSREAKALLAQLGGS"
BASE COUNT          487 a         1097 c         1096 g          462 t
ORIGIN      
        1 gggccgctgt tccccgatcc gccgggctac cgtcgccatc accccgatgc tcaggcccat
       61 ggccacggtg tagatcatgg tgagcatcga ctcggtgagc ccgaccgtgg ccaccgcatc
      121 gggccccagc cgggacacga agaagacgtc caccaccgcg aagatcgact ccatgatcat
      181 ttccatgacc atggggacgg ccagcaggat gatcgcacgg ccgagcgggc cgctggtata
      241 gtcgtggtgc ccgccgcgga gcgcgtcgcg cacattggtc caccagtggt gccgcgccgt
      301 catcggcgcc tccacttgag cttcagtact tgtcacgtgg tctccagacc cggttcttgt
      361 ctcgagttgt gacggtggac gaagcaacct ggctttcgtg caccgccgaa aaaatgaatc
      421 gccccacccg gctcggagcg cgggtggggc gggtctcggc ggaacgcgaa agggttcgcg
      481 gttatccgat cagagcctca cggccagcgc tccagcacgc ttcccccggc acccggtctc
      541 gggtgacggc gaaggggaag tcggggagaa cgctgatccg catgggcagc cttccagaat
      601 gagagtcggc gggctttcgc cagccgcttc gccaacagta gcaccgggaa cccggaacac
      661 gcaagcggcg ttcgaagagt cgttgcgcct caccctcgct gtcaggtggg ggtacttttg
      721 ctgcatgtca ggcgaagacg tcaccgaccg gatcctccgg tacaacgcgg ggcgggaccc
      781 cgaacgcctc gcccggaagt tcgcggcgat gcgggcgaca ccgttcactt tctttcgggc
      841 caccgcacat ctcttctacg aagcccgcga cctgctcgac ccggtggccg acgcgccggc
      901 cgtctggagc agcggtgatg tgcacctcga gaacttcggc tgttacaagg gcgacaacgg
      961 cctggcctac ttcgacctca atgatttcga cgaagccggc ctggcgccgc tcacctggga
     1021 cctggtgcgg ctggtcgcca gcgcgcttat cggcgccggc cccggcaggc tgagccccgc
     1081 cgaccggacc gatatcgccc gcacgatgct gacctactac cgcgagcatc tgcgcgaggg
     1141 gaaggcccgc tggatcgaac gggccaccgc cgagggaccg gtgcggcagc tgctccgtca
     1201 ggcgaaacgc cgcacccggc gggccctgct ctccgaccgc acccagcgcg ccgggcgcgc
     1261 ccgagtcttc cggctcgagc caggccggca ccatccggcg ccggccaccg agcaccgagg
     1321 ggtgaaggcg ctgctcaagc gggtggggcg ggagcacggg gacccggtgt tctacaaggc
     1381 gcgggacgtg gtgcggcggg tggcggggat ggcgagtctc ggcactcccc gatttgcggt
     1441 cctggtggag gggcgcggca gccccaacaa caactacctg ctcgatctca aggaagcgat
     1501 tccctcgacc ctggccgcgg cctcaccggt gaagcagccc cactgggcca gcgaggcgga
     1561 ccgggtggtg acggtgcaga actgggtcca ggcggtgtcg cccgcgctgc tcacaccggt
     1621 gcggtggggc cggcattcgc tggtgctccg cgagctccaa cccaccgccg accggctccg
     1681 ggccgcgcag tggcgcctca ggggcgagga gctggatcac ctgatccggg cagtgacggg
     1741 ggtgacggca tgggggcatc tgcgggcggc aggccggcgt ggagctgacg ggatcgacca
     1801 gctcatcgcc ttcggcgaat cgcggcggtg gcgctacccg gtgctggccg ccgcgcgggc
     1861 catggcccgc cgcaccctcg aggagtggaa cgcgttccgc gcgagcgact cagctcccgc
     1921 ccagctgggc cagtagcgcc ttcgcctccc ggctacgggg atgcccctcc cccgccccac
     1981 tccggagcgc ggcgagcgct tcggtgaccc gggcccgcgc ctcgtccttc cggcccagcg
     2041 ccatcagcgc ctgcccctgc cgcagtttgg actcgcccac gtaggcgctc cccttccgcg
     2101 cgatcgaatc caccgccgag atctcctcgg ccgcggtcgc gagggtgagc gcactgtccg
     2161 gctggcccag tgcaaccagc gcctgcgagg cttcgaggag cggtgggcgc atcccttcgt
     2221 tccgcttgcc tgcgaagaac ccgtccaccg taagggctgc gacaaaggca tcggccgcgg
     2281 cgcgcgactg tccctggccc agcgctatcg agccggccag gaagaggctg tcgcgggccg
     2341 cgggacgctt cacctgcctc gcgatggcga ccacgctgtc gagcgcccgg cgggccaggg
     2401 cgaagtcgcc ggtgcggctc gccgcgcgtc cgatcccgat ccaggcccgg cgcgatacat
     2461 cgcgcatccc gttggcgttg gcgaccgcga tgacccgctg ataccagacg atcgcgctgt
     2521 ccggctcgcc ggtattgaag agtgcctgcg cgtgctggta ccccacgacc ggatgagtgg
     2581 tgccgggatc gctcaggtcc acccgacggg cggcttcgcg ggtggcggcg agccccttct
     2641 cgagctcgcc cagccggctc aggacgttgt agcgattgga gaggagcgcg atggcagaga
     2701 aggtctcgct gtacccaatc gagtccatca catcggtagc ctgctggtac agcaccagcg
     2761 cacggcgggg atcgccgcca tcctccacgt gattggccag ctgattgtag accgtggcgg
     2821 cctgcagcgt caccagcgcc cctgccgaat cgagctcggc gagggaagta cggagcagcg
     2881 ccagcgaaga gtcgggcagg ctgtcgggca ccagctgcgc cgcaacgtag agacagctcg
     2941 ccagcgcccg ccggtccgga tgccgctcct gccggagctc cgccagcgcc gcatgcacca
     3001 tcgtccgggc cgaatcgggc tggttggagt cgttgagctg gttagcgtag ctgcaactca
     3061 ggtcgcgctg gagcgcggca tcgccggaga gcgtcgcgag ggaatcggcc tggtggaaca
     3121 gggcgagcag atcggaagag cg
//
LOCUS       DATIFF010000177         8979 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1102957, whole genome shotgun sequence.
ACCESSION   DATIFF010000177 DATIFF010000000
VERSION     DATIFF010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8979
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1102957"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..181)
                     /locus_tag="VLD58_02650"
     CDS             complement(<1..181)
                     /locus_tag="VLD58_02650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53219.1"
                     /translation="MGRISSALALLTALVACRATTARLPADLASRFEAESVVRRADDQ
                     VFRYTYYSRSTRGNRW"
     gene            complement(212..2260)
                     /locus_tag="VLD58_02655"
     CDS             complement(212..2260)
                     /locus_tag="VLD58_02655"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HSB53220.1"
                     /translation="MAEHFLRDLAVVLLAAAITTVVFQRLRLPVVLGYLLAGVFAGPR
                     TPIRMVVNEATINTLASLGVILIMFGIGLTFRLRRVISLIPTAGLTALIELSLMVTLG
                     YSAGQLLGWNSVASFFAGGVVAISSTMIVAKVLEESAPPRDLQEFVFAVLVFEDLAAV
                     LLLTVLSAIGTGTTLSGPVLGRLIASLGVVLFAMLAGGMLVVPRALRFVASLLRPETM
                     LVAAVGLCFGMAALAEKSGFSVALGAFLAGCLVAEAGIGRQVEREVRPVRDLFGAIFF
                     VAVGMQFDPAALAAHWPLVLLFTLIVMFGKTLGVTVGAFLAGRGVKAAVETALSVAQI
                     GEFAFIIASVGLAAGVVPPELYTVAIAVSAITAFTTPLFVRWSGALAQFVDRKLPGPI
                     QTFASLYGSWIETLRHVPGSETPGQRVRRSLRLLLLDAAAVLAVTLSYALLRERILGL
                     LTDDVGLPLFFARGALAFTVLAVIGPFIVGIVSIARRLGLELAQMAIPLPVRGVDNAV
                     SPRRLLANALQITTVILMGIPLVALLQAYLPALPAVVVLLGILALLGFGFLRSARDLQ
                     GHLKAGAEVVVAALAKQSATETASVDLARRLLPGLGDFTALRISEASPAHGRTLGQLN
                     LRGRTGATIVALLRGDHRIAFPEAGEQLQAGDMVALTGSHDAIAAAEVMLVGETAGAH
                     "
     gene            complement(2362..2820)
                     /locus_tag="VLD58_02660"
     CDS             complement(2362..2820)
                     /locus_tag="VLD58_02660"
                     /inference="COORDINATES: protein motif:HMM:NF014864.4"
                     /note="regulates arginine biosynthesis when complexed with
                     arginine by binding at site that overlap the promotors of
                     the arginine biosynthesis genes; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine repressor"
                     /protein_id="HSB53221.1"
                     /translation="MSVDRRKRQLKILELISARPIRTQEELAEVLAAEGWPVTQSSVS
                     RDISALKLVKVDGAYQRPARVVSAPEHPDERRIAEGLLTIDLAGDALVVLHTPAGEAN
                     RVALALDRLAWGDIVGTIAGDDTIFLAVRHRQAQQRVVRQLRRLGESRRG"
     gene            complement(2817..4259)
                     /locus_tag="VLD58_02665"
     CDS             complement(2817..4259)
                     /locus_tag="VLD58_02665"
                     /inference="COORDINATES: protein motif:HMM:NF012432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HSB53222.1"
                     /translation="MSKRQGGKPRRSAKTSAPREALPTTLWVSGNSLDRQMLDYTAAE
                     DRLWDARLLAWDILGGLGHIEGLRASKLLTQGEYQRLRAGLRQALKEVDDGRLVVTPE
                     HEDVHTAVEDWLVQRLGSVGERLHTGRSRNDQVACDLRLYLKDRLLLLADEALDLVES
                     LLIFAHKYQQVLWPGYTHTRRAMPSSAGLWAAAFAEGLLDTVEGAPAVWARVDRSPLG
                     SAAGYGVPLPLKREPAAKALGFGAVEHNVALVQNGRGKLEALVLFWCVQLGHELAKLS
                     TDIINFSSDEYGFLVLPSDLATGSSIMPHKRNPDLFELTRSRAAALEGDLLTVFQIKS
                     KLGSGYHRDFQLLKEPVMRGVDRLEGMLSMLAVSVPRIGVDPAVGRDILRGGPLATDE
                     VMRRVEGGSAFRSAYREVAAAIKEGDWWREPGTSEIIGRRRSTGGLGNLGLPQVRARL
                     RASRRWVAREQKKFDGAIDALAGRGGVRAR"
     gene            complement(4256..5332)
                     /locus_tag="VLD58_02670"
     CDS             complement(4256..5332)
                     /locus_tag="VLD58_02670"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HSB53223.1"
                     /translation="MAWISRPEIALLRDLVAIHSVSGSEEGLARWIEEWAGEARIAVR
                     RDDASVTLTVPGKAPGPVLALVSHIDTVPAGEGWTRPPFEPTIEDDRMYGRGSGDAKA
                     SVAAMLMAAKDIAEAGGPPVGTLLVILGYGEETKHTTMGTAVSRLGRIDAAIVGEPTN
                     LAPAIAQRGLMMVDLVARGVQRHAGYAADNPDFTNAIVELGRNVARLPELFRDRVHPI
                     LGIATATPTMLEGGVSRNVTPPTARAVLDVRSTPSWSHAELAGELKRALDVEVVVTSD
                     RLVPCETPSGSRLLALARELRPEGKPFGSPTCSDWVFLRDRDAIKCGPGTSRRSHTPD
                     EYVDLPEVSEARTFYGRLAQAYLS"
     gene            complement(5310..6245)
                     /gene="argB"
                     /locus_tag="VLD58_02675"
     CDS             complement(5310..6245)
                     /gene="argB"
                     /locus_tag="VLD58_02675"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HSB53224.1"
                     /translation="MTIDSSKGITGLKGALRYVRAYRDHIFVVKLGGEVLADTEALDR
                     VAAQLGLLSSLSIRVVVVHGGGPQATELSRRLGSEPTIVAGRRVTDDDALEVAKMVYA
                     GSLNVNLLAALRAHEVQAVGLSGVDAELITARRRPPVKVVDDAGVSREVDYGHVGDVD
                     RVDPRVLTTLLEARFVPVVASLAGDGDGNVYNVNADTVAESIAVAVQAQKLLFLTGAP
                     GVLRDRNDPSSLVTFADPDDLAALMAGGSIAGGMRPKVEACIRAATGGVERTHIIDGR
                     LPDSILLEVFTGAGCGTMIVGRKEKATYLGVDLAT"
     gene            complement(6360..7373)
                     /locus_tag="VLD58_02680"
     CDS             complement(6360..7373)
                     /locus_tag="VLD58_02680"
                     /EC_number="2.1.3.9"
                     /inference="COORDINATES: protein motif:HMM:NF003384.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_function: GO:0043857 - N-acetylornithine
                     carbamoyltransferase activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylornithine carbamoyltransferase"
                     /protein_id="HSB53225.1"
                     /translation="MTKRDFITAEEWGADGVNAVLALAERVKRGELLGGLERKVMAMV
                     FMDPSLRTRTSFETAMFLHGGHAVALEPGKSSWTLETEPGAVMDGATVEHVKDAARVL
                     GRYADVVGVRSFPRGTDWNIVREDRVVRDFARWCEKPVINMESSRRHPCQQLADALTL
                     KEKLGNPQGKRFVLQWAWHPKALPTAVPASAALAAAHLGMEIVIARPEGYELDPEDTA
                     LIRKIAQANGGEFVHIMNDPDEAVVGADVVYVKSWGAVKHFGRPEAEAELRSGHRDWR
                     LTPRRLRSTRGGKALVMHCLPVRRNVEIDDEVLDGATSAVLDQAENRLHVQRALLLEM
                     IGK"
     gene            complement(7370..8566)
                     /locus_tag="VLD58_02685"
     CDS             complement(7370..8566)
                     /locus_tag="VLD58_02685"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSB53226.1"
                     /translation="MSNSDLAARPAGAASAPKVTPSALLGTYSIFPVRPVAGRGSWLI
                     DDQGNEWLDAYGGHAVSATGHSHPAVVRAIAEQAERLLFYSTAVAHENRERLADELAR
                     RAPRPLTRVFFCNSGAEANENALNLARKFTGRRAVVSLEGGWHGRTAACLAVTDGARY
                     EEGATRAGIPLSRKIPFNQLDGLERAINPTVAAVILEPVQGMSGARAVDPAFLRRIRE
                     LCTEHGVMLIFDEVQCGVGRCGGFTAAEAYGVSPDLLSLAKGLASGLPIGATLISEAI
                     GATVKSGDLGSTFGGGPVPCAAALATLEVIDQEKLIENATTTGAHLAGAARAIPGVTG
                     IEGRGLLIGLRLNRPAAEVQKALMGRRMLVGTATDPSILRLIPPLSFSRDEADLLLAA
                     LREVLA"
     gene            complement(8592..>8979)
                     /locus_tag="VLD58_02690"
     CDS             complement(8592..>8979)
                     /locus_tag="VLD58_02690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53227.1"
                     /translation="WTGDREARARLMTHSGPFVRGIYLTLHVDLARKDGSKASPDIKS
                     LFEEAYRGRPFVRLLPQPPELTHAVGTNYALIHAAQSADGREAQVMVAVDNLVKGAGG
                     QGIQAMNLALGLPEETGLRFGPIFPI"
BASE COUNT         1475 a         3225 c         2996 g         1283 t
ORIGIN      
        1 cccagcgatt gccccgggtg ctccgcgagt agtaggtgta ccggaatacc tggtcatcag
       61 cccgcctgac gacactctcc gcctcgaacc ggctggccag atcggcaggc agcctggccg
      121 tcgtcgcccg gcatgccacc agggccgtca gcagcgccag cgccgaagag attcgaccca
      181 tcagacctcc gattctgtcg tcccggcgct ctcagtgagc cccggcggtt tcacccacaa
      241 gcatcacctc cgccgcagcg atcgcgtcat gacttccggt cagcgcaacc atgtcgccag
      301 cctggagttg ctcccccgct tcgggaaagg cgatacgatg gtcgccccgg aggagggcca
      361 cgattgtcgc cccggtgcgt cctcgcaggt tgagctgacc cagggtccgc ccatgcgcgg
      421 ggctcgcctc gctgatccga agcgcggtga agtcgcccag ccccggaagc agccgccgcg
      481 ccaggtccac gctcgccgtc tccgtcgccg actgtttcgc cagcgccgcg accaccacct
      541 cggcaccggc cttgagatgg ccctgaagat cccgcgcgct ccgcagaaaa ccgaagccaa
      601 gcagcgccag gatgccgagc agcaccacca cggcgggcaa cgccgggaga tacgcctgga
      661 gcagtgccac cagcgggata cccatcagga tgaccgtcgt gatctggagc gcgttcgcga
      721 gcagccgccg gggcgaaacg gcattgtcca cgccccgcac cgggagcgga atcgccatct
      781 gcgccagctc gagtcccagc ctccgcgcga tcgacacgat ccccacgatg aatggcccga
      841 tcaccgccag cacggtgaac gccagcgctc cgcgcgcgaa gaacaggggc agccccacgt
      901 catcggtcaa gagcccgagg atccgttcac gcagcaacgc gtacgagagc gtcaccgcga
      961 gcaccgccgc cgcatcgagc agcaggagcc ggagagagcg ccggacccgc tggcccggcg
     1021 tctccgatcc cgggacatgg cggagtgtct cgatccacga cccgtagagt gacgcaaagg
     1081 tctggatcgg tccggggagt ttccggtcga caaactgcgc cagcgccccg gaccagcgca
     1141 cgaacagcgg cgtggtgaac gcggtgatcg ccgagaccgc gatggcaacg gtgtagagct
     1201 cgggcggcac cacgccggcc gcgagcccga cggacgcgat gatgaacgca aactcaccga
     1261 tctgcgccac actgagcgcg gtctcgacgg cggccttcac cccacgcccc gcgaggaagg
     1321 ctccgaccgt aacgcccagc gtcttcccga acatcacgat cagggtgaag agcaggacca
     1381 gcggccagtg tgccgccagc gccgccggat cgaactgcat gccgacggcg acgaagaaga
     1441 tcgcgccgaa gaggtcgcgg accgggcgca cctcgcgctc cacctgccgc ccgatcccgg
     1501 cctccgccac caggcacccc gccaggaacg cccccagcgc caccgagaac ccgctcttct
     1561 cggccagcgc cgccatcccg aagcagagtc ccaccgcggc caccagcatc gtttcgggcc
     1621 ggagcaggct cgccacgaac cggagcgccc gcggcaccac cagcatgccc cccgccagca
     1681 tggcgaagag caccacgccg agactcgcga tcagtcggcc gagcacaggc cccgacaggg
     1741 tagtgcctgt gccgatggcg gagaggacgg tgagcaggag cacggcggcg aggtcctcga
     1801 acaccagcac cgcgaagacg aactcctgga gatcgcgcgg gggcgccgac tcctccagca
     1861 ccttggccac gatcatggtc gaggaaatcg ccaccacgcc cccggcgaag aagctcgcga
     1921 ccgagttcca cccgaggagc tggcccgccg agtacccgag cgtgaccatc aggctgagct
     1981 cgatcagtgc ggtgagaccg gcggtgggaa tcagggagat cacccggcgg agccggaatg
     2041 tgagcccgat cccgaacatg atcaggatga cgccgagcga ggcgagggtg ttgatggtgg
     2101 cttcattcac caccatccgg atcggagtcc ggggtccggc gaatacaccg gcaaggaggt
     2161 agccgagaac gacgggaaga cggagccgct ggaacaccac cgtggtgatg gcggcggcca
     2221 gcagcaccac ggcgaggtca cggaggaagt gctctgccac ggatcaggcc ggggtatcgg
     2281 cgtctgggag ggattgggga gcgccccggt cgctcatgcg gagttccggt tggaggggcc
     2341 ggcgaactgt ggtgggacgg atcagccgcg gcgcgactcg cccaggcgcc ggagctgtcg
     2401 cacgacgcgc tgctgggcct gccggtgcct cactgcgaga aaaatcgtgt cgtcgcctgc
     2461 aatggtaccg acgatatcgc cccacgcaag ccggtcgaga gccagggcga cccggttggc
     2521 ctccccggcg ggagtgtgaa gaactaccag ggcatcgccc gccaggtcga tggtgaggag
     2581 cccctcggca atccggcgtt cgtcgggatg ttccggagcg gagacgaccc tcgccggacg
     2641 ctgataggcc ccgtccacct tgaccagttt gagcgcgctg atgtcgcggc tcaccgagct
     2701 ctgggtcacg ggccaccctt ccgccgccag cacctccgcc agctcctcct gggtgcggat
     2761 gggccgcgcg ctgatcagct cgagaatctt gagctggcgc ttccgccgat ccacgctcac
     2821 cgggcccgca cccctccgcg gcccgcgagc gcgtcgatgg cgccatcgaa cttcttctgc
     2881 tcccgcgcca cccaccggcg gctggcccga agccgcgccc gcacctgcgg gagacccagg
     2941 ttgccgagcc caccggtgct gcgccggcgg ccgatgatct cggaggtccc cggttcacgc
     3001 caccagtcgc cttccttgat ggcggcggcg acctcgcgat aggccgaccg gaaggcgctc
     3061 cccccttcga cccggcgcat cacttcatcg gtggcgagcg gcccgccccg caggatgtcc
     3121 cggccgaccg cggggtcgac cccgatccgc ggcaccgaga ccgcgagcat cgagagcatg
     3181 ccctcgagcc ggtcgacccc gcgcatcacc ggttccttga ggagctggaa gtcgcgatga
     3241 tatccgcttc caagtttcga cttgatctgg aacaccgtga gaaggtcgcc ctccagcgcc
     3301 gcggcccggc tccgggtcag ctcgaagagg tccgggttcc gcttgtgggg catgatgctc
     3361 gacccggtcg cgagatcgga cggcagcacc aggaagccgt actcgtcgga gctgaagttg
     3421 atgatgtcgg tggagagctt ggccagctcg tggcccagct gcacgcacca gaacagcacc
     3481 agcgcctcca gcttgccgcg cccgttctgc accagggcaa cgttgtgctc caccgccccg
     3541 aagccgagtg ccttggcggc cggctcgcgc ttgagcggga gcggcacgcc gtaccccgcc
     3601 gcgctgccga ggggcgagcg atcgacccgg gcccagacgg ccggcgcgcc ttcgaccgtg
     3661 tcgagcagtc cttcggcgaa ggccgcggcc cagagcccgg ccgaggaagg catcgcgcgc
     3721 cgggtgtggg tgtaaccggg ccagagcacc tgttgatact tgtgcgcgaa gatgagcagg
     3781 ctctccacca ggtccagcgc ctcgtcggcg aggaggagca gccggtcctt gagatagagc
     3841 cggaggtcgc aggccacctg gtcgttccgg gagcggccgg tgtgcagccg ctcgcccacc
     3901 gagccgagcc gctgcaccag ccagtcctcc accgccgtat gcacatcctc gtgctcgggg
     3961 gtcaccacca gccgtccgtc gtcgacttcc ttgagcgcct gacggagccc cgcgcggagc
     4021 cgctgatact caccctgggt caggagcttc gaggcccgca ggccttcgat gtgtcccagg
     4081 ccacccagaa tatcccaggc caggagccgg gcatcccaca gccggtcttc ggccgcggtg
     4141 tagtcgagca tctggcgatc gagggagttg cccgagaccc acagcgttgt ggggagcgcc
     4201 tcacgcggag cgctggtctt cgctgaccgc cttggcttgc cgccttgccg cttgctcatg
     4261 agaggtatgc ctgtgccagt cggccgtaaa aggtgcgcgc ttccgagacc tcgggaaggt
     4321 ccacgtattc gtcgggagtg tgcgaacgcc ggctggttcc cgggccacac ttgatggcat
     4381 cacgatcccg caaaaatacc cagtcggagc aggtgggaga accgaagggc ttcccttccg
     4441 ggcggagctc ccgggccagt gcgaggagcc gggagccaga cggtgtctcg cagggtacca
     4501 gccggtcgga ggtgaccacc acctccacgt ccagcgcccg tttgagctcc cccgccaact
     4561 ccgcgtggct ccagctcggc gtgctccgca catcgagcac cgcccgcgcg gttggtggcg
     4621 tgacgttccg gctcacgcca ccttcgagca tggtcggagt ggcggtcgca atgccgagaa
     4681 tcgggtgcac ccggtcgcgg aagagctcgg gaagccgggc gacgttccgc cccagctcga
     4741 cgatggcatt ggtgaaatca gggttgtcgg cggcgtaccc ggcgtggcgc tgcactcccc
     4801 gcgcgaccag gtccaccatc atcaaacccc gctgcgcgat ggccggcgcg aggttggtcg
     4861 gctctcccac gatggcggcg tcgatccggc ccagccggct cacggcagtc cccatggtgg
     4921 tgtgcttggt ctcctcaccg tagcccagga tgacgagcag cgtccccacc ggggggccgc
     4981 ccgcctccgc gatgtctttc gcggccatga gcatcgccgc gaccgaggcc ttggcatcgc
     5041 cggagccgcg gccatacatc cggtcatcct cgatggtggg ctcgaaagga gggcgagtcc
     5101 acccttctcc ggccggcacg gtatcgatgt gggagaccag cgccagcacc ggcccgggcg
     5161 ccttccccgg aacggtcagg gtgaccgagg cgtcgtcacg ccggaccgcg atgcgggcct
     5221 caccggccca ctcctcgatc cagcgcgcga ggccttcctc cgagccgctg accgaatgga
     5281 tcgcgaccag gtcccggagc agggcgattt caggtcgcga gatccacgcc aagataggtc
     5341 gccttttcct tgcgcccgac gatcatcgtg ccgcaaccgg cgccggtgaa cacttcgagc
     5401 agaatcgagt cggggagccg gccgtcgatg atgtgggtcc gctcgacccc gccggtggcc
     5461 gcgcggatgc aggcctccac cttgggccgc atcccgccgg cgatcgagcc gccggccatg
     5521 agggccgcga gatcgtccgg atcggcaaac gtcaccaggc tcgagggatc gttccggtcg
     5581 cggagcacgc cgggcgcgcc ggtgagaaac aggagcttct gcgcctgtac cgccaccgcg
     5641 atcgactcgg ccacggtgtc ggcattgacg ttgtatacgt tcccgtcgcc atcgccggcg
     5701 agactcgcca ccacggggac gaaccgcgcc tcgagcagcg tggtgagcac ccggggatcc
     5761 acccggtcca cgtcgcccac atggccgtag tccacctcgc gcgacacccc ggcatcgtcc
     5821 accaccttca ccggcggacg ccggcgcgcc gtgatgagct cggcatcgac gccggagagc
     5881 ccgaccgcct gcacctcatg ggcccggagc gccgccagca ggttcacgtt gagcgacccg
     5941 gcgtagacca tcttggcgac ttcgagagca tcatcgtcgg tcacccgccg ccccgcgaca
     6001 atggtcggct cgctgccgag ccggcgggag agttccgtgg cctggggccc gccgccgtgg
     6061 accaccacca cgcggatgct gagcgacgag agcaggccga gctgggccgc gacccggtcg
     6121 agcgcctcgg tgtcggccag tacctcgcca cccagcttga ccacgaagat gtgatcgcga
     6181 taggcccgca catagcgcag cgcgcccttg agcccggtga tgcctttgga ggagtcgatg
     6241 gtcattgggt gtgggttatg ggtcttgggt caagggtcaa gggtcaaggg tcaagggtca
     6301 agggtgacga gcgtcgagag tcttcaaccc ttgacccgtg accctcgacc cgtgaccagt
     6361 tacttcccaa tcatctccag caacaacgcc cgctgcacat gcagccggtt ctctgcctgg
     6421 tccagcacgg ccgaggtggc gccatcgagc acctcgtcgt cgatctcgac attgcggcgc
     6481 accgggaggc agtgcatcac cagcgccttg ccgccgcggg tcgatcggag ccgccgcggc
     6541 gtgaggcgcc agtcacggtg ccccgaccgc agctcggcct ccgcctccgg ccggccgaag
     6601 tgcttcaccg cgccccacga cttcacgtag accacgtcgg cgcccaccac ggcttcgtcc
     6661 ggatcgttca tgatatggac gaactcgccg ccgttggcct gggcgatctt ccggatcagg
     6721 gcggtgtcct ccgggtcgag ctcgtatccc tcgggtcggg cgatcacgat ctccatgccg
     6781 aggtgggccg cggccagcgc cgcgctcgcg ggcaccgccg tgggcagcgc cttgggatgc
     6841 caggcccact ggagcacgaa acgcttcccc tggggattgc cgagcttctc cttgagcgtg
     6901 agcgcgtcgg ccagctgctg gcagggatgc cggcggctcg actccatgtt gatcaccggc
     6961 ttctcgcacc aacgggcgaa gtcccgcacc acccggtcct cccgcacgat gttccagtcg
     7021 gtgccccggg ggaacgagcg aaccccgacc acatcggcgt agcggcccag cacccgggcg
     7081 gcatccttca cgtgctccac cgtggcgccg tccatgacgg caccgggttc ggtctcgaga
     7141 gtccagctgc tctttcccgg ctcgagcgcc accgcatgcc cgccgtgcag gaacatcgcg
     7201 gtctcgaagc tggtgcgagt gcggaggctc gggtccatga agaccatcgc catcaccttg
     7261 cgctcgagcc cgcccagcag ctcgccccgc ttgacccgtt ccgccagggc cagcacggcg
     7321 ttcacaccgt cagcgcccca ctcttcggcg gtgatgaaat cccgcttggt catgccagca
     7381 cctcccggag agcggcgagg aggaggtcgg cctcgtcgcg gctgaacgac agcggaggaa
     7441 tgagccggag gatcgacgga tcggtcgcgg tgcccaccag catccgccgg cccatcagcg
     7501 ccttctgcac ctcggccgcc gggcggttga gccggagccc tatgagcagg ccgcggccct
     7561 cgataccggt caccccggga atcgcgcgag cggccccggc gagatgcgca ccagtcgtgg
     7621 tggcgttctc gatcagcttc tcctggtcga tcacctcgag ggtggcgagc gccgcggcgc
     7681 agggcaccgg cccgccgccg aacgtgctgc ccaggtcgcc cgacttcacc gtggcgccga
     7741 tcgcctccga gatcagcgtg gcgccgatcg gcagccccga ggcgagtccc ttcgcgagcg
     7801 acagcagatc cggtgagacg ccataagctt cggctgcggt gaaaccgccg caacggccga
     7861 caccacactg cacctcgtcg aaaatgagca tcacgccgtg ctcggtgcag agctcgcgga
     7921 tgcggcggag gaaggccgga tcgaccgcgc gcgcccccga catgccctgt accggctcga
     7981 ggatcaccgc ggccactgtc ggattgatcg cccgctccag cccgtcgagc tggttgaacg
     8041 gaatcttccg ggacagcggg attccggcac gggtcgcgcc ctcctcgtac ctggccccgt
     8101 cggtcaccgc gagacaggcg gcggtccggc catgccagcc accctcgagt gacaccaccg
     8161 cccgccggcc ggtgaacttg cgggccaggt tgagcgcgtt ctcgttggcc tcggcgcccg
     8221 agttgcagaa gaacacccgg gtgagcggcc tgggcgcgcg ccgggccagc tcgtcagcga
     8281 gccgctcccg gttctcgtgc gccaccgcgg tggaatagaa gagaagcctc tccgcctgct
     8341 ccgcgatcgc gcggaccacc gcgggatggc tgtgccccgt ggccgacacg gcgtggccac
     8401 cgtaggcgtc gagccactcg ttcccctggt cgtcgatgag ccaggagccc cgccccgcga
     8461 ccgggcggac gggaaagatc gaataggttc ccaggagcgc cgacggcgtg accttcggcg
     8521 ccgatgccgc gccggctggc cgtgcggcca gatcagaatt gctcatgaca gagatccgtt
     8581 cgagtcccgc gtcagatggg gaagatcggc ccgaacctga gaccggtttc ttccgggaga
     8641 cccagcgcaa ggttcatcgc ctgaatgccc tggcccccgg cgcccttcac cagattgtcg
     8701 accgccacca tgacctgggc ctcgcggcca tcggccgact gggccgcatg aatcagggcg
     8761 tagttggtgc ccaccgcatg ggtgagctcg ggcggctgcg gcaggagccg cacgaagggc
     8821 cggccccggt aggcttcctc gaagagactc ttgatgtcgg gtgaggcctt cgagccatcc
     8881 ttccgggcca ggtcgacatg cagcgtcagg tagatgccgc ggacgaaggg gccggaatgc
     8941 gtcatcaggc gggcccgtgc ctcgcggtcg ccggtccac
//
LOCUS       DATIFF010000178         1269 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1256790, whole genome shotgun sequence.
ACCESSION   DATIFF010000178 DATIFF010000000
VERSION     DATIFF010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1256790"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(80..>1269)
                     /locus_tag="VLD58_02695"
     CDS             complement(80..>1269)
                     /locus_tag="VLD58_02695"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB53228.1"
                     /translation="RSFFTLLGIIVSVGFLVTVVAVIQGMNAYVKENITGAVIGTNAF
                     QVRRLPIAMGLFSDEEIREMSKRPRLSPADAAVVRRALPDAQAVSLQSGWPTPTSDIT
                     WRDRTVGDVLVFGVTPPYQIVQDYRFTAGEPLADPDITERRPVAVLGFDVAEKLFGEP
                     ERAIGRRVRIAGREMTVKAVTAKKGRVLGQSFDAFLLVPISTFETMYGRRKTTTISVK
                     VARADEVPAAMARAEEALRVSRGLRPGEPDDFAVDKADALINFWKNLTRVLVAVIPAV
                     VCIGIVVGGIVIMNIMLMSVNERTREIGIRKSLGATRADIRTQFLVEAVVLSLLGGVL
                     GVAGGWTLAELVALITPLPARITAWSVAAAMALGAGTGILFGVYPATRAARLDPIVAL
                     RQE"
BASE COUNT          209 a          441 c          433 g          186 t
ORIGIN      
        1 cagtgccgac cggagcttgt tggaccggag cgaatcgaag gcgatcagca gcccttcccg
       61 gacgtgcgcc agcatcgggc tattcctgcc gcagggccac gatcgggtcg aggcgggcgg
      121 cccgggtggc cggatagacc ccgaagagga tgccggtgcc cgcgccgagc gccatcgcgg
      181 cggcgaccga ccaggcggtg atccgggccg gcagcggagt gatcagcgcc accagctcgg
      241 ccagcgtcca gccgccggcg acgcccagta ccccgcccag gagcgagagc accaccgcct
      301 ccaccaggaa ctgcgtccgg atgtctgccc gggtggcccc cagcgacttg cggatgccga
      361 tctctcgggt gcgctcgttc acgctcatca gcatgatgtt catgatcacg atgccgccca
      421 cgacgatgcc gatgcagacc accgccggga taaccgcgac gagcacccgg gtgaggttct
      481 tccagaagtt gatcagggcg tcggccttgt ccacggcgaa gtcgtccggc tcgccgggcc
      541 ggaggccccg ggacacgcgc agcgcctcct cggccctggc catggcggcc gggacctcgt
      601 cggccctggc gaccttgacc gagatcgtgg tggtcttgcg ccgcccgtac atggtctcga
      661 aagtgctgat ggggaccagc aggaaggcgt cgaacgactg gcccagcacc cgtcccttct
      721 tggcggtcac cgccttgacg gtcatctccc ggccggcaat ccggaccctg cgaccgatgg
      781 cccgctcggg ctcgccgaag agcttctcgg ccacgtcgaa gccgagtacc gccaccgggc
      841 gccgctccgt gatgtccgga tcggccagag gctcgccggc ggtgaagcga taatcctgca
      901 cgatctggta gggcggggtg acgccgaaga ccagtacgtc gcccacggtg cggtctcgcc
      961 aggtgatgtc gctggtcggc gtgggccagc cggactgcag cgagaccgcc tgggcgtccg
     1021 gcagtgcccg tcgcaccaca gcggcgtcgg cggggctcag ccggggacgc ttgctcatct
     1081 cccggatctc ctcatccgag aacaacccca tcgcgatcgg cagccggcgg acctggaagg
     1141 cgttggtccc gatcacggcg ccggtgatgt tctccttgac gtacgcgttc atgccctgga
     1201 tcaccgctac gacggtgacc aggaatccca ctgagacgat gatcccgaga agagtgaaga
     1261 aggaacgga
//
LOCUS       DATIFF010000179         1182 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_641042, whole genome shotgun sequence.
ACCESSION   DATIFF010000179 DATIFF010000000
VERSION     DATIFF010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_641042"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            41..>1182
                     /locus_tag="VLD58_02700"
     CDS             41..>1182
                     /locus_tag="VLD58_02700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53229.1"
                     /translation="MPEPDWGNLGLRTPRAEGAPQSLASLLWYNADGTGQDGNQLPAF
                     LDGVLKRACATGYRWVFTEMPNRTALATLRAARRDGFGALAAFDRGASVLRVTQQDQL
                     DGFRPYFVEYSPLHCTRRRIARGVLDYMVLRVPLDPAQEVTDTGLPVPATYGRYLLVR
                     AGYRGLGAMWQEGGWWLYTNDHEEIDHGTWESTRGLIPMVRCVGEQSPGTWEHPALAR
                     SLTMELGQIAVDLMNARSEQRHNARQAAKTILWGLGMDGTAQSAAGTQVTAGSLLVGV
                     PPVQNPDGSYLIPQIWSSSSALMDTQVYGQIIADGLSEARELMVRQVTSTPDSSGESK
                     KAGFEEGTSPMLARMAANFETWVNSLLYFWGQRAGIPTPTASITMPR"
BASE COUNT          197 a          403 c          427 g          155 t
ORIGIN      
        1 cctccaggcg agcctcctgt cggggcatat gcggcgggcg atgccggaac ccgactgggg
       61 gaacctcggg ctccgcacgc cccgcgccga aggggcaccg caaagcctgg cgagcctgct
      121 ctggtacaac gccgacggca ccgggcagga cgggaaccaa ctccccgcgt tcctcgacgg
      181 cgtgctcaag cgggcctgtg ccaccggcta ccgctgggtc ttcaccgaga tgccgaaccg
      241 gacggccctg gcgacgctcc gcgcggcccg gcgcgatggg ttcggcgcgc tggccgcgtt
      301 cgaccgaggc gcgagtgtgc tccgggtgac gcagcaggac caactcgacg ggttccggcc
      361 ctacttcgtg gaatactccc cgctgcactg tacccggcgg cgcatcgcgc ggggcgtgct
      421 cgactacatg gtgctccgcg tcccgctcga cccggcgcaa gaggtgaccg acacgggctt
      481 gccggtgccc gccacctacg ggcgctacct cctggtgcgg gcgggctatc gcggcctcgg
      541 agcgatgtgg caagagggcg gctggtggct ctacaccaac gaccatgagg aaatagacca
      601 cggcacctgg gagagcacgc ggggcctcat cccgatggtg cgctgcgtcg gcgagcagag
      661 ccccggcacc tgggagcatc ccgcgctcgc ccggtcgctc acgatggagt tgggccagat
      721 tgcggtggac ctgatgaacg cccggagcga gcagcggcac aacgcgcggc aagcggcgaa
      781 gacgatcctc tgggggctcg ggatggacgg gacggcgcag agcgccgccg gaacgcaggt
      841 caccgccggg agcctcctgg tcggggtgcc gccggtccag aacccggatg ggagctacct
      901 catcccgcag atttggagca gcagcagcgc cctgatggac acgcaggtct acggccagat
      961 catcgccgac gggctcagcg aggcgcggga gttgatggtc cggcaggtca ccagcacacc
     1021 ggactccagc ggcgagtcga agaaagccgg gttcgaggaa gggacctcgc cgatgttggc
     1081 ccggatggcg gcgaacttcg agacctgggt gaacagcctg ctatacttct ggggacagcg
     1141 cgccgggatt ccgaccccga ccgcgagcat cacgatgccc cg
//
LOCUS       DATIFF010000180         3730 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2026305, whole genome shotgun sequence.
ACCESSION   DATIFF010000180 DATIFF010000000
VERSION     DATIFF010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3730
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2026305"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..258
                     /locus_tag="VLD58_02705"
     CDS             <1..258
                     /locus_tag="VLD58_02705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53230.1"
                     /translation="IARAIAKQPDVLLCDEPTGALDYETGVKVLEVLQRCNVELGTTT
                     VIITHNAAIAAMADRVIRLRSGQIVGVERNARRASPAELSW"
     gene            255..2618
                     /locus_tag="VLD58_02710"
     CDS             255..2618
                     /locus_tag="VLD58_02710"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSB53231.1"
                     /translation="MSALARKGLRDAWHLRGQMLSVAAVVACGIASMVTMRGMHDSLV
                     ASQQAYYAADRFADVFVHLRRAPDAVAAEIRAIPGVAQAEPRLVTQVLLDVPGLSEPA
                     SGHLVSVPERGRPLLNDIHLRSGRWLGQDRGNEIMVSEAFAEANHLIAGDSVGALVNG
                     RWRVFRIVGIGLSPEFVYEVPPGAIFPDKRRFGVLWMSRAELGPALAMEGGFNDLSLT
                     LMPGADTAEVIARIDQALVPYGGLGAYDREDQVSHRFLSDEINQHRVSGVLIGYIFLA
                     VAAFLLNVVLARLVGMQRDQIAVLKAFGYSNARVGYHYLALGLVPVLLGTVAGCALGA
                     WAGGKVAAIFAQFYRFPVLRHVITLRVLVTAALISFVSAALGTLSATRRAVRLPPAEA
                     MRPEAPPTARRGFLDRIGLLARVGPAFRMVVRSLVRRPVRAALSTLGISVAVALLLVG
                     RYFFDAVDYMANLSFRLAQRQDAMVTFTEPRGVRAAYELGALPGVVTVEPFRAVPARL
                     RHAHYVYRIGLQGLPAHGTLRLLLDESLARVPVPDGGVLLTRKLGEILHVRAGDTITV
                     EVLEGRRPVRNVVVAGLVDELIGLGAYLQLPVLNTLMEEGPTISGAMLKVDADSAAEV
                     YDRLKRLPAVANVSVRAATLQSFYDTLAGSMQISTRIILTFACVIAIAVIYNGSRVTL
                     SERARELASLRVLGFTRGEVALVLFGEQGLLTLAALPLGSAIGYALCALIPAAYNTDL
                     YRLPLVLSDRSFFFACAVVLLTALAVALLIRRRIDRLDLVGVLKTRE"
     gene            2625..>3730
                     /locus_tag="VLD58_02715"
     CDS             2625..>3730
                     /locus_tag="VLD58_02715"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HSB53232.1"
                     /translation="MLRLTRKQLLSAVAILVLLLIVVYAFRPSGFAVDTGTVTSGPLM
                     TTVDDEGKTRVRDRYTVSAPVGGRLLRPSLRAGDRVTAGMVVAMLEPAPLDSRSLEQA
                     RTRIRSAEDAERVAAAGLVAARAALAQASRLRQRAETLAARGLVAPEERERSELAEIT
                     AEREVEAADFRTQAAGHDVETARAAVIASSGSGRGAPFPVKTPVAGRVLRLIEESERV
                     VSAGAPIMEVGNPASIEIVADLLSADAVQVSPGDTILVEAWGGDTPLKARLRSVEPSG
                     FTKVSALGVEEQRVNIVGDLLDQSDRLGDRYRVEVRIVVWQADKVLRVPVSALIRNGG
                     KWAVYRVVNGKARLTPVEVGHRSNADAEVLKGLA"
BASE COUNT          514 a         1244 c         1361 g          611 t
ORIGIN      
        1 atcgcgcggg ccatcgccaa gcagcccgac gtgctcctct gcgacgagcc caccggcgcg
       61 ctcgactacg agaccggggt caaggtgctg gaggtgctcc agcgctgcaa cgtcgagctg
      121 ggcaccacca ccgtgatcat cacccacaac gccgcgatcg ccgcgatggc cgaccgggtg
      181 atccggctcc gcagcggcca gatcgtgggg gtggagcgga acgcgcggcg ggcatcgccg
      241 gcggagctgt cctggtgagc gcgctggcgc ggaagggctt gcgggacgcc tggcacctcc
      301 ggggccagat gctctcggtc gcggcggtgg tggcctgcgg catcgcgtcg atggtgacga
      361 tgcgggggat gcacgattcg ctggtcgcgt cacagcaggc ctattacgcc gccgaccggt
      421 ttgccgacgt gttcgtgcat ctccgccgtg cgccggacgc ggtggccgcc gagatccgcg
      481 cgatccccgg tgtggcgcag gccgagccgc gactggtcac ccaggtcctg ctcgacgtac
      541 ccgggttgtc cgagcccgcc tcgggacacc tggtgtcggt gcccgagcgc ggccgtcccc
      601 tcctcaacga cattcatctc cggagcggcc gctggctggg gcaggaccgc ggcaacgaga
      661 tcatggtgag cgaggccttt gccgaggcca atcacctgat cgcgggcgac agcgtcgggg
      721 cgctggtgaa cggccgctgg cgggtgttcc ggatcgtggg catcgggctt tcgcccgagt
      781 tcgtctacga ggtgcccccc ggcgccatct tccctgacaa gcggcgcttc ggggtgctgt
      841 ggatgagccg ggccgagctg gggcccgccc tggcgatgga aggcgggttc aacgacctca
      901 gcctgacgct catgcccgga gcagacaccg ccgaggtgat cgcgcgaatc gatcaggcgc
      961 tggttcccta cggcgggctg ggcgcctacg accgcgagga ccaggtctcc caccgcttcc
     1021 tgagcgacga gatcaatcag caccgggtca gcggcgtcct gatcggctac atctttctcg
     1081 cggtcgccgc cttcctgctc aacgtggtgc tggcgcggct ggtcgggatg cagcgcgacc
     1141 agatcgcggt gctcaaggca ttcggctaca gcaacgccag ggtcggctac cactacctgg
     1201 cgctggggtt ggtgccggtg ttgctgggga ccgtggccgg gtgcgcgctg ggagcgtggg
     1261 ccggcgggaa ggtcgccgcg atctttgccc agttctaccg ttttccggtg cttcgccacg
     1321 tgatcacgct gcgggtgctg gtaaccgcgg cgctgatcag ctttgtcagc gccgccctcg
     1381 gaactctgag cgctacccgc cgcgccgtcc ggctcccgcc ggcggaggcg atgcgtcccg
     1441 aagcgcctcc cacggcacgg cgtggtttcc tcgaccggat tggcctgctg gccagagtgg
     1501 gcccggcgtt ccgcatggtg gtccggagcc tggtgcgccg tcccgtccgc gccgccctca
     1561 gcaccctcgg catcagtgtc gcggtcgccc tgttgctggt gggccggtac ttcttcgacg
     1621 cggtcgacta catggccaac ctctccttcc ggctggcgca gcggcaggat gcgatggtca
     1681 cgttcaccga gccgcgcggg gtccgggccg cctacgagct gggagcgctc ccgggagtgg
     1741 tcacggtcga gccattccgg gccgtgccgg cgcggctccg gcacgcgcac tatgtctacc
     1801 gcatcggtct ccaggggttg cccgcgcacg ggaccctgcg gctgctcctg gacgagagcc
     1861 tcgcccgggt gccggtgccg gatggtggag tgctgctgac ccgcaagctg ggagagattc
     1921 tccacgtgcg ggctggtgac acgatcacgg tggaggtgct cgaagggcgc cggccggtgc
     1981 ggaacgtggt ggtcgccggg ctggtggatg agctgatcgg gctgggcgcc tatctccagc
     2041 tgccggtgct caacaccctg atggaggagg ggcccacgat ctcgggggcg atgctcaagg
     2101 tcgatgccga cagcgccgcc gaggtgtatg accggctcaa gcggctgccg gcggtagcca
     2161 acgtctcggt ccgggctgcc accctacaga gcttctacga taccctcgcc gggagcatgc
     2221 agatctcgac ccgcatcatc ctgaccttcg cctgcgtcat cgcgatcgcg gtgatctaca
     2281 acggctcccg ggtgacgctg tcggagcggg cccgcgagct ggccagcctc cgggtcctgg
     2341 gatttacccg gggcgaggtg gcactggtcc tgttcggcga gcagggactc ctcacactcg
     2401 cggccctgcc gctcggaagc gccatcggtt acgcgctctg cgccctgatc ccggccgcat
     2461 acaacaccga tctctaccgg ctgccgctgg tgctgagtga ccgcagcttc ttcttcgcct
     2521 gtgccgtggt gcttctcacg gcgctggccg tagcgctcct gatccgccgt cgcatcgacc
     2581 ggctggacct ggtgggcgtg ctcaagaccc gggagtaatc ccagatgctc cgcctgaccc
     2641 gcaagcagct tctctcggca gtcgccatcc tggtactgct cctcatcgtc gtgtacgcct
     2701 tccgacccag tgggttcgcc gtcgataccg ggacggtgac gagcggtccc ctgatgacca
     2761 cggtggatga cgaaggcaag acccgggtgc gcgaccggta cacggtttcg gcgccggtgg
     2821 gcgggcggct gctccgccca tcgctcaggg cgggcgatcg ggtgacggcg gggatggtgg
     2881 tcgccatgct cgagccggcg ccgctcgaca gccgttcact cgagcaggcc cgcacccgca
     2941 ttcgttccgc ggaagacgcc gagcgggtgg cagctgccgg tctggtggcg gcgcgcgccg
     3001 cgctggcgca ggcctcgcgt ctccggcagc gggcggagac gctcgcggcg agagggctgg
     3061 tggcgccgga ggagcgggaa cgcagcgaac tcgccgagat taccgccgaa cgcgaggtcg
     3121 aagcggcgga cttccgtacc caggcggccg ggcacgatgt ggaaaccgcc cgcgcagcag
     3181 tgatcgcgtc cagcggatcg gggcgcggcg ctccattccc cgtgaagaca ccggtcgccg
     3241 gccgtgtgct ccggctcatc gaggagagcg agcgggtggt ctcggccggg gccccgatca
     3301 tggaggtggg aaatcccgcc agcatcgaaa tcgtggccga tctgttgagc gccgatgcgg
     3361 tgcaggtgag ccccggcgac acaatcctgg tcgaggcctg gggtggggac accccgctca
     3421 aggcgcggct ccgttcagtg gagccttccg gcttcaccaa ggtgtcggcg ctcggggtgg
     3481 aagagcagcg ggtcaacatc gtcggagatc tgctcgacca gtcggaccgg ctgggtgacc
     3541 gctaccgggt ggaggtacgg atcgtggtct ggcaggccga caaggtgctc cgggttcccg
     3601 taagcgctct catccggaac ggtggcaagt gggccgtata ccgggtggtg aacgggaagg
     3661 cgcgcctcac gccggtggaa gtagggcacc ggagcaacgc cgacgccgag gtgctgaagg
     3721 ggctggccga
//
LOCUS       DATIFF010000181         9713 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_794675, whole genome shotgun sequence.
ACCESSION   DATIFF010000181 DATIFF010000000
VERSION     DATIFF010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9713
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_794675"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1384)
                     /locus_tag="VLD58_02720"
     CDS             complement(<1..1384)
                     /locus_tag="VLD58_02720"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HSB53233.1"
                     /translation="MSMEVRLSRELRLMDITMIGVGAMIGAGIFVLTGIAAGVAGPAL
                     ILVFLLNGIVALLTAMAYAELGSAFHDAGGGYLWVKTSLPDPNGFLSGWMSWFAHAVA
                     CSLYALGFGAYFRLVLSALSVSEVQVSFMTLEKWLAVVICLLFSYINFRGASETGKAG
                     NVVTVGKVVIIGAFIAAGLWVMGRRSDWPQAFQPFLNHGWGAVFAAMGLTFIAFEGYE
                     IIAQTSEEVEHPKRNVPRAVFLSLLIVVPIYLLVALVAVGGVTPPAGVGVTEYLGREK
                     ELALVTAANQFVIGGGIVLLVGGLLSTLSALNATIYSSSRVAFAMARDANLPQFLGRV
                     HARRATPHTAILFSALIIIGMAVALPIEDVAAAADIMFLLLFVQVNVAVIRLRKSRPD
                     LDRGFRVPLVPLTPLVAIGTMLFLAVFLSAHYPNSLIATGVWIAVGVAVYYGYSRKRE
                     AAFEERREWME"
     gene            1848..2507
                     /locus_tag="VLD58_02725"
     CDS             1848..2507
                     /locus_tag="VLD58_02725"
                     /inference="COORDINATES: protein motif:HMM:NF039842.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5752 family protein"
                     /protein_id="HSB53234.1"
                     /translation="MLVELQSKESFVFCSTAHVIELTGRAARTLAELRAGIAEVTGSS
                     IFHHTFGALQDRFFAAQRFTSDFARWAAEVLQDWPVAERLALMHPTEFPSIRSLREHV
                     LEVIDDRLREGEPPAPAPHGREFHFSQSISLVYPAGYEARTLAQLRQGIRRASDRTLF
                     FHLIEARLRIGRCTTDLSCWLSEALGAPHLANRLDRLDFLVPSTEELRQQALAALEGS
                     P"
     gene            2504..3742
                     /locus_tag="VLD58_02730"
     CDS             2504..3742
                     /locus_tag="VLD58_02730"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB53235.1"
                     /translation="MTPPALSLEDYGPIIGPATIAEIRELARRLEGRRLLMVNSTAVG
                     GGVAELLNRLIPLLKDLGMSTRWEVLRGGEAFFGVTKAIHNALHGAPVALTRAMQDLF
                     LEVVAQNAASIELDADLAVMHDPQPLALVAARPPGGGRWVWRCHVDVSHPQPDVWAFL
                     RDYIVRYDASVFSAPEFSQVLPIPQYMIHPAIDPLAEKNRELSATEVEAVLAKLGIRD
                     DRPIVTQVSRFDRLKDPVGVIRAYRLVRRTAECQLVLAGGGAADDPEGAVVLEEVRRA
                     ADGDPLIHILDLPPFSDREINALQRASAVVVQKSLREGFGLTVTEALWKKRPVVASAV
                     GGIPLQVLHNLTGLLVHSVEGAAYRIRTLLREPDFARRLGENGHAYVKTRFLTTSNLR
                     RWLALAHALQYPGERIIRLP"
     gene            3780..4664
                     /locus_tag="VLD58_02735"
     CDS             3780..4664
                     /locus_tag="VLD58_02735"
                     /inference="COORDINATES: protein motif:HMM:NF044972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HSB53236.1"
                     /translation="MNWFTQPLISIGSTRVSPASLALFVVVVAGVVFGARTLGTLVGS
                     RLLARTSLDRGLQYAVGRMTYYTLLVLGLMIALQTSGIEVGSVTVILGALGVGIGFGL
                     QNIVNNFVSGLILLVERPVQHGDWIEVDRIGGRVERIGARSTIIVTSDNITMIIPNAD
                     LITRQIINWSHGDPTVRFRVPVGVAYGSDIDRVRQALLEVAVGHPGVLRDPPPTVFFT
                     GFGDSALNLELVVWSRDMVQTPLRFRSDLNFAIDAAFRRHGIQVPFPQRDLHLKSGRV
                     PASLPAPEPDAPKTEGHA"
     gene            complement(4865..6742)
                     /gene="malQ"
                     /locus_tag="VLD58_02740"
     CDS             complement(4865..6742)
                     /gene="malQ"
                     /locus_tag="VLD58_02740"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004134 - 4-alpha-glucanotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HSB53237.1"
                     /translation="MRTDAWGMDDGYEDAFGHWRPTSAETRARVRRAMGADPEEPIPG
                     GRPRVHVIRPGQPLPIEKPAEIVLEDGTVLPETSPPPELPLGYHQLRPLDGTAPVRLI
                     VAPDHCHLPEGLRAWGWAVQAYAVRSAESWGFGDLGDLWRLGRWSATTLGAGFLLVNP
                     LHAATPVPPLQPSPYCPSSRLYRNPLYIRIEQVPGATAARVDVEALAAAARVLNRSRR
                     IHHDRVWELKLRALEAIWKAFGGDPAFDGYCRKEGEALERFAAFSVLAERHGPGWRRW
                     PEDVRDPISAGVARFAAEHADRIRFHQWLQWLLDRQLARVAAEIRLVQDLPVGIDPDG
                     ADAWAWQDLLASGATVGAPPDRYNTAGQDWGLAPFVPSRLRAAAYDPFIRTIRATLEH
                     AGGLRIDHAMGLFRLFWIPAGGAPAEGTFVRYPADDLLAIVALESHRAGAIVVAEDLG
                     TVEPEVRDRLAAHRMLSWRVLWFETEAPASYPRLSLASVTTHDLPTIAGLWTGSDLQV
                     QRDLGLERNAEALAVLQSRLGAVTGLAEGTDVREVIVRTHERVAEAPSVLVAAALDDA
                     LAVEERPNLPATTGAEWPSWSLALPVPLEALEREPLVRKVAAAVGRGRAGRRPVASPE
                     E"
     gene            complement(6767..6958)
                     /locus_tag="VLD58_02745"
     CDS             complement(6767..6958)
                     /locus_tag="VLD58_02745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53238.1"
                     /translation="MRVRRGVGRLPALGEAGRLDRLHVRFTELAWRLTLHDGPVTLVP
                     GGLKPAPASTAARVLDAVA"
     gene            complement(7008..7577)
                     /locus_tag="VLD58_02750"
     CDS             complement(7008..7577)
                     /locus_tag="VLD58_02750"
                     /inference="COORDINATES: protein motif:HMM:NF021524.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2254 family protein"
                     /protein_id="HSB53239.1"
                     /translation="MTTLRVWAPRAGRVELAPGIAERVQGCFILGRQRSPEQDAEYGV
                     HQLVEVAVRALSPGVNDPYTALACVDWLGAVLCKIGRQPLRTPQRLGPDGSLRLIMAS
                     VTFEGMLAAAFNQIRQSARATPAVSIRVLEALARIGGSVIEESHRTAVRAQADMVLHG
                     ALSEGIQDCDRQDLEARSRAVIEVLEKPD"
     gene            complement(7574..8293)
                     /locus_tag="VLD58_02755"
     CDS             complement(7574..8293)
                     /locus_tag="VLD58_02755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53240.1"
                     /translation="MRDERVREGQGSPEPRATYRVQLRPGFGFDEAAAIADYLSEPGV
                     SHLYGSPGLQAAPGSRHGSDVVDPTRLNEELGGTEGHRGSDWPERSAEYRLSQTLVGA
                     WSLELDRVRASMERAAPEAKVHTSWAAPSTEYEEALAAFVEGSLGDREFLADVEAFVT
                     PLVAPGRITSLAQTLLKLTAPGVPRLVWSPGGDWQDTTIECPDGDWRNVLTGDRLAGG
                     RLLLAALLSRFPVALLERQGP"
     gene            complement(8539..>9713)
                     /locus_tag="VLD58_02760"
     CDS             complement(8539..>9713)
                     /locus_tag="VLD58_02760"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HSB53241.1"
                     /translation="NTLNMQHPRVLQMIMDSLRYWVTDMHVDGFRFDLASALARELHD
                     VDRLGAFFDIIHQDPVISQVKLIAEPWDLGEGGYQVGNFPPGWAEWNGKYRDIVRDYW
                     RGSDRTLGEFASRLAGSPDLYEASGRRPHASINFVTAHDGFTLRDLVCYHDKHNEANG
                     EENRDGESHNRSWNCGAEGPSDDAGVNTLRARQQRNFLATLFLSQGVPMLLGGDEIGR
                     TQGGNNNGYCQDNETSWFDWAGADQSLLEFTRRLIRFYKAHPVFRRRRWFQGRPIHGS
                     RVSDIGWFSPDGRGMSEENWGAGFAKSLGVFLNGEGIATPGARGERVADESFYLLFNG
                     HHEPLAFTLPARHWGRRWVTVLDTAEPLPQETDHAYDAGKAVQVEARSLVVLRRVA"
BASE COUNT         1505 a         3447 c         3301 g         1460 t
ORIGIN      
        1 gttccatcca ctccctgcgc tcctcgaagg ccgcctcgcg cttccggcta tagccatagt
       61 agaccgccac gcccaccgcg atccagacgc ctgtcgcgat cagggaattc gggtaatggg
      121 cagagaggaa gactgccagg aacagcatgg tcccgatggc caccaggggc gtgaggggca
      181 cgaggggcac ccggaagccg cggtccaggt ccgggcggct cttgcgcagc cggatcaccg
      241 ccacgttcac ctggacaaag agcaggagga acatgatgtc tgccgcggcg gcgacatcct
      301 cgatggggag ggcgactgcc atcccgatga tgatgagggc cgagaagagg atcgccgtgt
      361 gcggcgtggc tcgcctggcg tgcacgcggc ccaggaactg cgggaggttg gcgtcgcggg
      421 ccatggcgaa ggcgacacgg gaggaggagt agatcgtggc attcagcgcc gacagcgtgg
      481 agagcagccc gccgaccagc aggacgatgc cacccccgat cacgaactgg ttggccgcgg
      541 tcaccagggc cagctccttc tcccggccca gatactcggt gacgccgacc ccggctggtg
      601 gggtcacgcc ccccacggcg accagggcca ccaggaggta gatggggaca acgatcagca
      661 gcgagaggaa caccgcgcgg ggaacgtttc gtttgggatg ctccacctcc tcgctcgtct
      721 gggcgatgat ctcgtagcct tcgaaggcga tgaacgtgag gcccatggcc gcgaacaccg
      781 ccccccaccc gtggttcagg aagggctgga aggcctgcgg ccagtcggac cgccgcccca
      841 tcacccagag ccccgcggcg atgaacgcgc cgatgatcac gaccttgccg acggtcacga
      901 cgttgcctgc cttgcccgtc tcggaggcgc cgcggaaatt gatgtaggaa aagagcaggc
      961 agatgaccac cgccagccac ttttccaggg tcatgaagct cacctggacc tcggacacgc
     1021 tgagggccga gagcaccagc cggaagtagg cgccgaaccc cagggcgtag agcgagcatg
     1081 ccacggcgtg ggcgaaccag gacatccagc cgctcaggaa gccattcggg tccggcaggg
     1141 aggtcttgac ccagaggtag ccgccgcccg cgtcgtgaaa ggcgctgccc agttcggcat
     1201 aggccatggc ggtcagcagg gcgacgatgc cgttgagcag gaagacgagg atcagggccg
     1261 gcccggcgac accggccgcg atccccgtga gcacgaagat gcccgccccg atcatggccc
     1321 cgacgccgat catggtgatg tccatgagcc gcagctcgcg gctcaagcgc acttccatgc
     1381 tcatccgcca gcccctcctt cgcgctccgg gaataccggg tccaccgact cacctgcagg
     1441 ccgcggctga cgcgcgttca tcccggatgt cctcgccacc ctttccgtct ccggagccca
     1501 gtctgaagat tcgtcgcctt cgtgaacgcc tccctggacc aggccggccg ggcactgggc
     1561 acactaccat caggcaaccc gcattttcaa gcagaagggt ggatggcatc cggccgtcgt
     1621 ctgggccacc ccaggtctga aggaggaact ccgggacgag gggcagcctg gcacgacgag
     1681 cctgcggacg ccagccgagc tgtccccgca gagtcggcct gtcggcgacg gcgtccgcga
     1741 gccgacacgg aggcagtgcg acacattccg ccttgttctt ccccacccag ggcaggtagt
     1801 atacatgcct ccctggcgag agccgacgcc gacaaccgac aggagccgtg ctcgtggagt
     1861 tgcagagcaa ggaatcgttt gtcttttgca gcaccgccca cgtcatcgag ttgaccgggc
     1921 gggcggcccg caccctggcg gagctgcgtg caggcatcgc ggaggtgacg ggctccagca
     1981 tcttccatca tacgttcggc gcgctccagg atcggttctt cgccgcccag cggttcacca
     2041 gcgacttcgc ccgctgggcc gcggaggtgc tccaggactg gcccgtggcc gagcgcctgg
     2101 ccctcatgca cccgacggag ttcccctcca tccgaagcct gcgggaacac gtcctggagg
     2161 tcatcgacga ccgcttgcgt gagggcgagc cgcccgcgcc cgcgccgcat ggccgggagt
     2221 tccacttcag ccagtccatc agtctcgtct atcccgccgg gtacgaggcg cgcacactgg
     2281 cccaactgcg ccaggggatc cgccgggcca gcgaccgcac gttgttcttc cacctgatcg
     2341 aagcccggct gcggatcggc cggtgcacga ccgatctctc ctgctggctg tcggaggcct
     2401 tgggcgcccc ccacctcgcc aaccgtctcg accgcctcga cttcctggtg ccgtccacag
     2461 aggagttgcg acagcaagcc ctggcagccc tggagggctc gccgtgactc cgcccgcact
     2521 cagcctcgaa gactacggcc ccatcatcgg tccggcgacc attgcggaga ttcgagagct
     2581 ggcccggcgc ctggaggggc gccggctcct catggtgaac tccacggccg tcggcggggg
     2641 cgtggccgag ctgctcaatc ggctcattcc cttgctgaag gacctgggga tgtcgacccg
     2701 atgggaggtc cttcgcggcg gcgaggcgtt cttcggagtg accaaggcga tccacaacgc
     2761 cctgcacggg gcacccgtgg cactcacccg cgccatgcag gatctcttcc tggaggttgt
     2821 ggctcagaac gccgcctcga tcgagttgga cgcggaccta gcagtcatgc acgatcccca
     2881 gccgctcgcc ttggtggcgg cgcggccgcc gggtggaggc cgatgggtct ggcgctgcca
     2941 tgtagacgtg tcgcacccgc agccggatgt ctgggccttc ctgcgggact acatcgtgcg
     3001 ctacgacgcc tcggtcttct cggcgccgga attctcccaa gtcctcccca tcccccagta
     3061 catgatccac cccgccatcg acccgctggc ggagaagaat cgcgagttgt cggcgaccga
     3121 ggtcgaggcg gtgctggcga agttggggat ccgggacgac cggcccatcg tcacgcaggt
     3181 gtcccgcttc gatcgcctga aggaccctgt cggcgtcatc cgggcctacc ggttggtccg
     3241 gcggaccgcc gagtgccagt tggtcctggc cggtggcggg gccgccgacg accccgaggg
     3301 tgcggtcgtc cttgaggagg ttcgccgggc ggcggacggc gatccgctga tccatatcct
     3361 ggacctcccg cccttcagcg accgggagat caacgccctg cagcgggcct cggccgtggt
     3421 ggtgcagaag tcactccggg aggggttcgg cctcacggtc accgaggcgc tctggaagaa
     3481 acggccggtc gtcgcctccg ccgtcggcgg gattccgttg caggtcctgc acaacctgac
     3541 gggcctcctg gtgcactccg tggagggagc cgcctaccgg atccgcaccc tcctgcgcga
     3601 gcctgacttc gcacgccgcc tgggggagaa cggtcacgcg tacgtgaaga cccgattcct
     3661 gaccaccagc aatctgcgcc gctggctggc gctggctcac gccctgcagt atcccggcga
     3721 gcggatcatc cgcctgccgt gaccgacgcc gccatcttgc aggcacgccg aggtctggga
     3781 tgaactggtt cacgcagccg ctgatctcca tcggatcgac ccgcgtcagt ccggcctcct
     3841 tggcactttt cgtggtggtc gtggcgggcg tcgtcttcgg agcccgaacg ctcgggacac
     3901 tcgtcggatc gcgcctgctg gcccgcacca gcctcgaccg gggtctccag tacgccgtcg
     3961 gccgcatgac ctattacacc ctcctcgtcc tcggcctgat gatcgcgctc cagaccagcg
     4021 ggatcgaggt gggcagcgtg accgtcatcc tcggcgccct gggcgtgggc atcggcttcg
     4081 gactgcagaa catcgtcaac aacttcgtca gcggcctcat cctcttggtg gagcgcccgg
     4141 tgcagcacgg agattggatc gaggtggatc gcatcggcgg ccgcgtcgaa cgtatcggcg
     4201 cacgcagcac gatcatcgtc accagcgaca acatcacgat gatcatcccc aatgccgacc
     4261 tgatcacccg gcagatcatc aactggagcc acggcgaccc cacggtccgt ttccgggtcc
     4321 cggtgggggt ggcctacgga agcgacatcg accgcgtccg ccaggcgctg ctggaggtgg
     4381 cggtcggcca tcccggggtc ctgcgggatc cgccgcccac ggtgttcttc accgggttcg
     4441 gggactcggc cctgaacctg gagctggttg tctggagccg cgacatggtc cagaccccgc
     4501 ttcggttccg gagtgacctg aactttgcca tcgatgcggc cttccgccgc cacgggatcc
     4561 aggttccgtt cccccagcgc gatctccacc tcaagagcgg gagggtgcca gcgtccttgc
     4621 cggcacccga gccagacgca cccaagaccg aaggacatgc atagctggct gtccgtggcg
     4681 gcgtctcatc ggagccggcg tcctcgccat ggaattcgag ctctcctttg cactcagaga
     4741 actcgtggcc ggcgcgctgc tggcgatcgt ggtggaccac ttcgtcatcc cggtcccccg
     4801 cacaagcgcc gggggcgggt ctgctaccga gggaccgccg acgcggcgac ccacaacctc
     4861 caccttactc ctccgggctg gcgactggcc ggcggccggc acgcccacgg ccgacggccg
     4921 ccgctacctt ccgcaccagg ggctcccgct cgagcgcctc gagcggcacg ggcaatgcca
     4981 gggaccagct tggccactcg gcgcccgtcg tggccggcag gttgggccgc tcctcgaccg
     5041 ccagcgcgtc gtcgagggcc gccgcaacca aaacagacgg cgcctcggcc acccgctcgt
     5101 gggttcgcac gatcacttcg cgcacatccg tcccctccgc cagaccggtt acggccccga
     5161 gacgggactg gagcaccgcg agcgcctcgg cgttccgctc gagtcccagg tcgcgctgca
     5221 cctggaggtc cgagccggtc cagaggccgg cgatcgtcgg gaggtcgtgc gttgtcaccg
     5281 acgccagaga gaggcgtggg taagaggccg gggcctcggt ctcgaaccag aggacgcgcc
     5341 aggacagcat ccggtgggcc gcgagccggt cgcgcacctc cggctcgact gtcccgaggt
     5401 cctcagccac gacgatcgcc cctgcccggt ggctctccag tgcgacgatc gccaggaggt
     5461 catcggcggg ataccgcacg aaggtcccct cggcgggcgc gccgcctgcg gggatccaga
     5521 agagacggaa gagccccatg gcgtggtcga tccgcagccc gccggcgtgt tcgagggtgg
     5581 cgcggatcgt ccgaatgaac ggatcgtaag cggctgcccg cagccgggac gggacgaagg
     5641 gcgccaggcc ccagtcctgc ccggccgtgt tgtagcggtc gggcggggcg ccgacagtgg
     5701 ccccggacgc cagcaggtcc tgccaggccc aggcgtcggc accgtcgggg tcgatcccga
     5761 ccgggagatc ctgcaccagc cggatctcgg cggcgacccg cgccagttgc cggtcgagca
     5821 gccactgcag ccactggtgg aagcggatcc ggtcggcgtg ctcggcggcg aagcgggcga
     5881 cgcccgccga aatcgggtcc cggacgtctt ccggccatcg gcgccacccc gggccgtggc
     5941 gctcggcgag gaccgagaac gccgcgaacc gctcgagcgc ctcgccctcc ttccggcagt
     6001 agccatcgaa cgccgggtcg ccgccgaacg ctttccagat cgcctcgagc gcccggagct
     6061 tgagctccca gacgcgatcg tggtggatcc gccggctgcg gttgagcacc cgggcggcgg
     6121 ccgcgagcgc ctccacgtcg acgcgcgccg cggtggcccc cgggacctgc tcgatacgga
     6181 tgtagagcgg gttgcggtag aggcggctgc tggggcagta ggggctcggc tggagcggcg
     6241 ggaccggggt cgcggcgtgc agcgggttca ccaggaggaa cccggcgccg agcgtcgtgg
     6301 ccgaccagcg cccgaggcgc cagaggtcgc cgaggtcgcc gaagccccag ctctcggcgc
     6361 tccgcacggc gtacgcctgc accgcccacc cccaggcccg gaggccctcc ggaagatggc
     6421 agtggtcggg agccacgatc agacgcaccg gggcggtccc gtccagaggc cggagctggt
     6481 ggtagccgag cggcagctcc ggcggcggcg aggtttccgg gagcaccgtg ccgtcctcga
     6541 gaacgatctc ggccggtttc tcgatcggca ggggctgtcc cgggcggatg acgtggacgc
     6601 gaggcctgcc ccccgggatc ggttcctccg gatccgcccc catcgcccga cgcacgcgag
     6661 cgcgcgtctc ggcggacgtg ggacgccagt ggccaaaggc atcctcgtac ccgtcgtcca
     6721 tgccccaggc gtcggttctc acccttcggg tctccgccct catggctcag gcgaccgcgt
     6781 ctagcacgcg ggcggccgtg ctcgcaggag ccggcttgag gccgcccggg acgagcgtga
     6841 cagggccgtc gtggagcgtg agccgccacg ccagctcggt gaaccggaca tggagccggt
     6901 cgagccggcc ggcctcgccc agcgctggaa ggcggcccac gcctcggcgc accctcaccg
     6961 ggcatatcgc tgggcagccc ggccgggctg gcgagaacct cgtgcattca atctggcttc
     7021 tccagcactt cgatcaccgc tcgagaccgc gcctcgaggt cctggcgatc acagtcctgt
     7081 atcccttcgg agagggcccc gtgaaggacc atgtcagcct gtgcgcggac cgcggtacgg
     7141 tggctctcct cgatcacgct cccaccaatg cgcgcgaggg cctccagcac tcgaatggac
     7201 acagccggtg tcgcccgtgc gctctgccgg atctgattga aggcggccgc cagcatcccc
     7261 tcgaaggtga ccgaagccat aatgaggcgg aggctgccgt cgggacccag tcgctgagga
     7321 gtgcgaagcg gctgcctccc gatcttgcag agcacggcgc cgagccagtc cacgcaggcc
     7381 agggccgtgt aggggtcgtt cactccgggc gacagggcac gcactgcgac ctcgacgagc
     7441 tggtggaccc cgtattccgc atcctgctca ggcgagcgct gccggcccag gatgaagcat
     7501 ccctggacgc gctcagcgat gcccggagcg agctccaccc gtccggcccg cggggcccac
     7561 acccggagcg tggtcatggc ccttgccgct ccaggagggc gaccgggaag cgggacagca
     7621 gcgcggcaag caggagccgg ccgcccgcga gccggtcccc cgtgagcaca ttgcgccagt
     7681 ccccgtcggg acactcaatg gtcgtatcct gccaatcccc gccaggcgac cagaccaggc
     7741 ggggcacgcc gggtgcggtc agcttgagga gcgtctgggc gagcgaggtg atccggccgg
     7801 gcgcgacgag gggcgtcacg aacgcctcga catcggcgag gaactcgcgg tcaccgagcg
     7861 atccttcgac gaaggcagcg agcgcctcct cgtactcggt gctgggagcg gcccacgacg
     7921 tatggacctt ggcctcgggc gccgccctct ccatggacgc ccggacccgg tcgagctcga
     7981 gcgaccaggc cccgaccagg gtctgggaca agcggtactc ggcgctgcgc tccggccagt
     8041 cgctcccccg gtggccttcc gtgccgccca gctcctcatt caggcgggtg ggatccacga
     8101 catcggagcc gtgtctgctg ccaggggccg cctggagacc cggcgagccg tagaggtgac
     8161 tgaccccggg ttcggatagg tagtcggcga tcgcggccgc ctcgtcgaag ccgaatccgg
     8221 gccggagctg gacgcggtac gtcgcccgcg gctcgggcga tccctgcccc tccctgacgc
     8281 gctcgtccct catgccctgc acggcgtcac cccgtcgagc gcggatgttc tccgctcgct
     8341 ggcacgatcg cggcagatcg tcccggccga ctgaccgaga ggcgacccgt ttcgcttcac
     8401 caggctcccg gcaccgcttc gcagctcgtt ccatgcgcgc tcggcgcctg cccgcagatc
     8461 ctgccaggca accttccccc cgctggcgag cttctcgagt cccgccggcc gcgctcggtg
     8521 cgctctggag cacacgtctc acgcgacacg gcgtagcacc acgagagagc gcgcctcgac
     8581 ttggaccgct ttgcccgcgt cataggcatg gtcggtctct tgggggagcg gctcggcggt
     8641 gtccagcacc gtcacccagc ggcgccccca gtgccgggcc ggcaaggtga aggcgagggg
     8701 ctcgtggtgg ccgttgaaga gcaggtagaa gctctcatcc gccacccgct cgcctcgcgc
     8761 gcccggggtg gcgatcccct cgccgttcag aaacaccccc agcgacttgg cgaacccggc
     8821 gccccagttc tcctccgaca tacccctccc gtcaggcgag aaccacccga tgtcgctgac
     8881 gcggctcccg tggatggggc gcccctggaa ccagcgccgg cgccgaaaga ccggatgggc
     8941 cttgtagaac cggatgaggc gtcgcgtgaa ctccaggagg ctctgatcgg cccctgccca
     9001 gtcgaaccac gaggtctcgt tgtcctggca gtagccgttg ttgttcccgc cctgcgtgcg
     9061 gccgatctcg tctccgccga ggagcatggg gacgccctga gacaggaaga gggtggccag
     9121 gaagttgcgt tgctggcgcg cgcggagcgt gttcaccccg gcatcgtcgc tggggccctc
     9181 cgcgccgcaa ttccaagaac ggttgtggct ctcgccgtcc cggttctcct cgccgttggc
     9241 ctcgttgtgt ttgtcgtgat aacagacgag gtcgcgcagg gtgaagccgt cgtgggcggt
     9301 gacgaagttg atgctggcgt gggggcggcg gccgctcgcc tcgtacaggt ccgggctgcc
     9361 cgccaaccga gaggcgaact cgcccagggt ccggtccgat ccccgccagt agtcgcgcac
     9421 gatgtcccga tactttccat tccactccgc ccagcccggc ggaaagtttc cgacctggta
     9481 gccgccctcg cccagatccc agggctcggc gatgagcttg acctgggaga tgaccgggtc
     9541 ttgatgaatg atgtcgaaga aggccccgag ccgatccacg tcgtgcagtt cccgggcgag
     9601 cgcggacgcg aggtcgaagc ggaagccgtc gacgtgcatg tccgtcaccc agtagcgcag
     9661 cgaatccatg atcatctgca gcacgcgcgg gtgctgcatg ttgagcgtgt tgc
//
LOCUS       DATIFF010000182         4848 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2026491, whole genome shotgun sequence.
ACCESSION   DATIFF010000182 DATIFF010000000
VERSION     DATIFF010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4848
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2026491"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..568)
                     /locus_tag="VLD58_02765"
     CDS             complement(<1..568)
                     /locus_tag="VLD58_02765"
                     /inference="COORDINATES: protein motif:HMM:NF014670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HSB53242.1"
                     /translation="MRISDMNWMQVEAYLKHDDRAVLPLGSTEQHSYLRLTVDCILPE
                     RVAADAAEPLGIPVFPVFSYGVTPYFREYPGSISLRVDTHLAVVRDILDSMAHSGFRR
                     IMICNGHGGNGAAQQFAQEWAADHPRCKVLFHNWWNAPRTWARVQAIDPVASHGSWME
                     NFPWTRLPGVELPKEQRPMVDMERVRLSD"
     gene            646..807
                     /locus_tag="VLD58_02770"
     CDS             646..807
                     /locus_tag="VLD58_02770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53243.1"
                     /translation="MAHAALAQQALDPVAVGKGGCEEIGWRGHRVAGRSLEPSVSGTS
                     KMLGAGSAG"
     gene            887..1669
                     /gene="fabG"
                     /locus_tag="VLD58_02775"
     CDS             887..1669
                     /gene="fabG"
                     /locus_tag="VLD58_02775"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HSB53244.1"
                     /translation="MEIMLTGRRALVTGANSGIGASIARELAAAGARVVVNYVVNPEA
                     AEAVVGAIRQAGGEAVALAADVSDAGQVGAMFATIDQTWGGLDILVNNAGIDGPRALA
                     WEADPKDWERVLRIDLLGAFHCAREALKRMVAQRSGVVLNLTSVHEKVPWSGYSAYTA
                     AKAGLSMMTKTLSQEAAPFGVRVVALAPGAIRTPINRNVWSDPSSLADLLTKIPLDRI
                     GEPEEISRVALFLVSDTASYLTGSTVFVDGGMTDYPEFGHGG"
     gene            1676..4042
                     /locus_tag="VLD58_02780"
     CDS             1676..4042
                     /locus_tag="VLD58_02780"
                     /inference="COORDINATES: protein motif:HMM:NF012926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HSB53245.1"
                     /translation="MDELIAPGWPGIPGRWTSANKCGVGTALGGSAVWFTLSHGILNE
                     IYAPRMDQAATRDLGLVVTAAGGFFSEEKRHADHETSCPVPGVPFYRLTNTCTYGRYR
                     IEKEIITDPARPVVLQRIRFTPLRGSLEDYRLFTLLSPHLDNHGAGNTGRVAEYKGVP
                     ALFATRDGHALCLISSAGFRARSVGFVGVSDGWQDLRQHGELSWKYTLAEDGNVALTG
                     ELDAGDGELVLALGHGRTAEEAACQARASLAEGFEPLLGAYISEWERWQQGLWRAPDR
                     PLFATSTMVVKTHQSKHIPGAILASLAVPWGFAKGDGDLGGYHLVWPRDMVEAAGGLL
                     AAGAKSEAREALVYLETTQEADGHWPQNMWSDGRYYWHGVQMDETALPILLVDLARRS
                     GALEDQDRSARRFWPMVRRAAAFLAQSGPVTQQDRWEEDGGYTPFTLAAEIAALLAAA
                     DLAELAGEPALAPYLRETADGWYDCIDRWLFVRGARLAREVGVDGYYMRITPADVEDG
                     DEVVAIKNRQPGESAGRADAIISADALALVRFGLRAADDPRIRDTVRVIDALLRVELP
                     AGPSWHRYNGDGYGEQEDGGPFDGTGIGRVWPLLTGERAHFALARGDRAEAERLLGTM
                     ERLAGDGGLLPEQSWDSPDIPERELYFGRPAGSAMPLVWAHAEYLKLARGLADGRVFD
                     TPPQTVERYLKRGTRSTLVHWRFNHKIRELPPGRTLRVETLAPAVIHWSTDGWRTARD
                     APTRDSGLGVHLADLPTPALPAGSEILFTFYWPEGDRWEGADFSVKIP"
     gene            complement(3985..4776)
                     /locus_tag="VLD58_02785"
     CDS             complement(3985..4776)
                     /locus_tag="VLD58_02785"
                     /inference="COORDINATES: protein motif:HMM:NF012455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MIP/aquaporin family protein"
                     /protein_id="HSB53246.1"
                     /translation="MKAWPLWCSEFIGTALLVGVGCSLVILDFSPSSPVAAILPDAGV
                     RRAITGFLFGSVGALIAVSPVGVVSGAHINPAVTLAFWLEGRMRGDVALGYVLAQLGG
                     GIVGAVPLRLWGVTGADVAFGATAPGAAGLWVAVLGEAGATFCLIAGLLLFVGHPRMR
                     RFTPVFFPFLYALLVWLEAPLSGASTNPARSLGPGLIAGDLHAWWIFWVGPLLGTLAA
                     IGLRRVLPMARSFEIGVAKVFHFHHDRYGIFTEKSAPSQRSPSGQ"
BASE COUNT          799 a         1631 c         1707 g          711 t
ORIGIN      
        1 gatcgctcag gcgcacccgc tccatgtcga ccatgggtcg ttgctccttc ggcagctcga
       61 cgcccgggag ccgcgtccag gggaagttct ccatccatga gccgtgagat gccaccggat
      121 cgatggcctg gaccctggcc caggtccggg gcgcgttcca ccagttgtgg aagaggacct
      181 tgcagcgggg gtgatccgcc gcccactcct gggcaaactg ctgggcggcg ccgttgcccc
      241 catggccgtt gcagatcatg atgcgccgga agccgctatg cgccatgctg tcgaggatat
      301 cgcgtaccac ggccaggtgg gtgtcgaccc ggagggaaat cgatccgggg tactcccgga
      361 agtagggggt gacgccgtag gagaagaccg gaaacaccgg gattcccagg ggctcggcgg
      421 cgtcggcggc gacccgctcg gggaggatgc agtcgaccgt cagccggagg tagctgtgct
      481 gctcggtact gccgaggggc agcacggcgc ggtcatcgtg tttgaggtag gcctcgacct
      541 gcatccaatt catgtcgctg atgcgcatgt cgctggtccg ctccggtcgg tgctgatgga
      601 atacgctacg ccagctccag gcgttgaacc gcgggctccg tcgccatggc gcatgccgcc
      661 ctggcccagc aggcgctcga tccggtagcg gtcggcaagg gcggctgcga ggagatcggg
      721 tggcggggtc atcgggtggc cggccgcagt ctggagccct cggtaagtgg tacatcgaaa
      781 atgctgggcg ccggatcggc tggctagggc agccgcgggc gaaactccgc ccaggctatg
      841 ttcagacaac acctgactcg ggtgtgaatg aatgggggat caacgcatgg agatcatgct
      901 cacagggcgt agagcccttg tcaccggggc caactccggg atcggtgcga gcatcgcacg
      961 cgaactcgcc gcggccggcg cccgcgtcgt ggtgaactat gtcgtgaacc ccgaggccgc
     1021 cgaggccgtc gtgggtgcga tccggcaggc ggggggagag gccgtggcgc tcgcggcgga
     1081 cgtgtccgac gccgggcagg tgggcgccat gttcgcgact atcgaccaga cctggggcgg
     1141 tctcgacatc ctggtgaata acgccggcat cgacgggccg agggccctgg cctgggaggc
     1201 ggacccgaag gactgggagc gggtgctgcg gatcgatctg ctgggcgcgt ttcactgcgc
     1261 ccgcgaggcc ctcaagcgaa tggtggcgca gcgaagcggc gtggtcctca atctgacctc
     1321 ggtgcacgag aaggtgccct ggagcggcta cagcgcctac accgccgcca aggccggact
     1381 gtccatgatg acgaagacgc tgagccagga ggccgcaccc ttcggcgtgc gggtagtggc
     1441 cctggccccg ggagccatcc ggacgccgat caaccggaac gtctggagcg atccgtcgag
     1501 tctcgccgat cttctcacca agattcccct ggaccggatc ggcgaaccgg aggagatctc
     1561 ccgggtcgcg ctctttctgg tttccgacac cgcgtcctac ctgaccggca gcacggtctt
     1621 cgttgacggt ggaatgaccg actaccccga attcgggcac ggcggatagg agcccatgga
     1681 cgaactgatc gcaccgggct ggccgggaat cccggggcgc tggacctcgg cgaacaagtg
     1741 cggtgtcggt accgcgctcg gcggcagcgc ggtctggttc accctttctc acggcatcct
     1801 caacgagatc tacgccccgc ggatggacca ggccgccacg cgcgatctcg gactggtggt
     1861 gacggctgcc ggcggctttt tctccgagga aaagcgccat gccgatcacg agaccagctg
     1921 tcccgttccc ggggtcccgt tctaccggct caccaatacc tgtacctatg gccggtaccg
     1981 catcgaaaag gaaatcatca ccgatcccgc ccgcccggtg gtcctgcagc gaatccggtt
     2041 cactccgctc cggggaagcc tcgaggacta ccgcctcttc acccttctga gcccgcacct
     2101 cgacaaccac ggcgccggca ataccgggcg ggtggcggag tacaaaggtg ttccggcgct
     2161 gttcgcgacc cgcgacggtc atgccctgtg cctgatctcg agcgccggat tccgggcccg
     2221 ctcggtgggc ttcgtgggag tctccgatgg ctggcaggat ctccgccagc acggcgagct
     2281 ttcctggaag tacaccctgg ccgaagacgg caacgtggct ctgacgggcg aactcgatgc
     2341 cggagacggg gagctggtcc tcgcgctggg gcacggccgc accgcggagg aggccgcctg
     2401 tcaggcccgg gcgtcacttg ccgaagggtt cgagccgctg ctcggggcct acatcagtga
     2461 gtgggagcgc tggcagcagg gcttatggcg cgctcccgac cggccgctct tcgccaccag
     2521 caccatggtg gtgaagaccc atcaatcaaa gcacatcccg ggggccatcc tcgccagcct
     2581 cgctgtgcca tggggattcg ccaagggcga tggcgacctg ggcgggtacc acctggtgtg
     2641 gccccgggac atggtcgagg cggcgggcgg actgctggcc gcaggggcga agtcggaggc
     2701 ccgcgaggcc ctggtatacc tcgagacgac ccaggaagcg gacggccact ggccccagaa
     2761 catgtggagc gacggccggt actactggca cggcgtgcag atggacgaga cagcgctgcc
     2821 catcctgctg gtcgatctgg cacgccgttc gggggcgctc gaggaccagg accgctcggc
     2881 ccggaggttc tggccgatgg tcagacgggc cgccgccttc ctggcgcaga gcgggccggt
     2941 cacccagcag gatcgctggg aggaggacgg gggctacacc cccttcaccc tggcggcgga
     3001 gattgcggcc ctcctcgccg ccgcggacct ggccgagctc gccggcgagc cggcgctcgc
     3061 cccgtacctg cgtgagaccg ccgacggctg gtacgactgc atcgaccgct ggctgttcgt
     3121 ccggggcgcc cggctcgccc gggaggtcgg agtggacggc tactacatgc ggatcacccc
     3181 ggccgacgtc gaggacgggg acgaggtcgt ggccatcaag aaccgtcagc ccggggagtc
     3241 agcgggccgg gccgacgcga tcatcagcgc ggacgccctg gcgctggtgc gcttcggcct
     3301 gcgcgccgcg gacgacccgc ggatccggga cacggtccgg gtcatcgacg ctctgcttcg
     3361 ggtggagttg cccgccggtc cgtcgtggca ccggtacaac ggcgacggct acggcgagca
     3421 ggaggacggg ggccccttcg acggcacggg tatcggccgg gtctggccgc tgctcaccgg
     3481 cgagcgggcc catttcgcgc tggcccgcgg ggaccgggcc gaagccgagc ggctgcttgg
     3541 gaccatggaa cgactcgccg gcgatggcgg tctgctgccg gagcagagtt gggactcgcc
     3601 ggacattccg gagcgcgagc tgtacttcgg ccgtcccgcc ggctcggcca tgccgctggt
     3661 ctgggcccac gcggaatacc tgaagctggc ccgcgggctc gccgatggcc gggtcttcga
     3721 caccccgccg cagaccgtgg agcgctacct gaagcgggga acccgatcga cgctggtcca
     3781 ctggcgattc aaccacaaga tccgcgagct gccgccgggc cgcaccctcc gggtcgagac
     3841 gctcgcgccg gcagtcatcc actggagcac cgatggttgg cgaactgccc gggatgcgcc
     3901 cacgcgcgac tccggactcg gcgtgcacct cgcggacctt cccactccgg cgctccccgc
     3961 cggctcggag atcctcttca ccttctactg gcccgagggg gaccgctggg agggggcgga
     4021 cttttcggtg aagatcccgt agcgatcgtg gtggaagtgg aacaccttgg cgaccccgat
     4081 ctcgaacgac cgggccatgg gcaagaccct cctcagccca atcgccgcca gcgtaccgag
     4141 cagtggtccc acccagaaga tccaccaggc atgcaggtcg ccggcgatga gccccggccc
     4201 gagacttcgt gcggggttcg tgctggcgcc ggagagtggc gcctccagcc agaccagcag
     4261 cgcgtaaagg aacgggaaga aaaccggggt gaagcggcgc atccgcggat ggccgacaaa
     4321 cagcaacagc ccggcgatca ggcagaaggt ggcgcctgct tcaccgagga ccgcgaccca
     4381 caaaccggca gcgcccggag cggttgcccc gaaggcaacg tctgcgccag tcacacccca
     4441 aagccggagg gggacggctc cgacgatgcc accccccaac tgggcgagga catagcccag
     4501 ggctacatct cccctcatcc gcccttcgag ccagaaggcg agtgttaccg ccgggttgat
     4561 gtgcgctccg ctgaccacgc caaccggcga gacggcgatc agcgctccca ctgagccgaa
     4621 gagaaagccg gtgatcgccc ggcggacgcc ggcgtcaggc aggatggcag ccaccggact
     4681 cgacgggctg aagtccagaa tcaccaggga gcagcccacg cccacgagga gggcggtccc
     4741 gatgaattcg gagcaccaca gcggccacgc cttcacaggt cgtctaccat cgccagacaa
     4801 gccgtggcca tgtcgccgtc cgccccgccg gtcctacagg tgctcgac
//
LOCUS       DATIFF010000183         1071 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_26175, whole genome shotgun sequence.
ACCESSION   DATIFF010000183 DATIFF010000000
VERSION     DATIFF010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26175"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..633)
                     /locus_tag="VLD58_02790"
     CDS             complement(<1..633)
                     /locus_tag="VLD58_02790"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB53247.1"
                     /translation="MPLLESIRLALRTIRTQKLKSFFSLVGVLIGVTFLIAVVSIVQG
                     MNRYMVDRFANTLIGANTFELRQRPSINLGNITEDVWRAWRRRPRISYADADYVRERI
                     HTPATFAKFCEDYVPVRFAGRVAKDVRLAGSEETYFRIRNYEITAGRSFSAQEVRAAT
                     PVLVLGSEVAEKLMPGLDPIGKVVQIGGLPYRVIGVVAKQGTLFGLSLDKF"
     gene            complement(635..>1071)
                     /locus_tag="VLD58_02795"
     CDS             complement(635..>1071)
                     /locus_tag="VLD58_02795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB53248.1"
                     /translation="GFVFQTFNLLPRASALQNVELPLIYGGTGAKERRRAAELALQRV
                     GLADRVGHRPNELSGGQRQRVAIARALVNRPSILLADEPTGNLDSVTSEEIMGVFGDL
                     HRAGQTVIMVTHEPDIAAHAQRIVALRDGRVESDRLTREAAA"
BASE COUNT          167 a          385 c          348 g          171 t
ORIGIN      
        1 gaacttgtcg agcgagagcc cgaacagggt gccttgcttg gccacgacgc cgatcacccg
       61 gtagggcaat cccccgatct gcaccacctt cccgatcggg tcgagacccg gcatcagctt
      121 ctcggccacc tcgctcccga gcaccagcac cggcgtcgcc gcccgcacct cctgcgccga
      181 gaatgatcgt ccggcggtga tctcgtagtt ccggatccgg aagtaggtct cctccgaccc
      241 cgccagacgc acgtccttcg ccaccctgcc ggcgaacctc accggcacgt agtcctcaca
      301 gaacttggcg aaggtcgccg gggtgtggat ccgctccctc acgtagtcgg catcggcgta
      361 gctgatccgg ggccggcgcc gccacgcccg ccagacgtcc tccgtgatgt tgcccaggtt
      421 gatgctgggc cgctgccgca gctcgaaggt gttggcgccg atcagggtat tggcgaaccg
      481 gtccaccatg taccggttca tcccctggac gatggagacc accgcgatca ggaaggtcac
      541 tccgatcagc accccgacca gggagaagaa gctcttgagc ttctgggtcc ggatagtccg
      601 gagggcgagg cggatggact cgagcagcgg catcctaggc ggccgcctcg cgggtgagcc
      661 gatcgctctc cacccgtccg tcccgcagcg ccacgatccg ctgggcgtgg gccgcgatat
      721 cgggctcgtg ggtgaccatg atcaccgtct gcccggcccg gtgcaggtcg ccgaagacgc
      781 ccatgatttc ctcgctggtc acgctgtcca ggttcccggt cggctcgtcg gccagcagga
      841 tgctgggacg gttgaccagc gcccgggcga tggccacccg ctgccgctgg ccgccggaga
      901 gctcgttcgg gcggtgcccg acccgatccg ccagtccgac ccgctgaagc gccagctccg
      961 ccgcccgccg ccgctccttg gcgccggtgc cgccgtagat caggggaagc tccacgttct
     1021 gcagagccga ggcgcgggga agcaggttga acgtctggaa gacgaatccg a
//
LOCUS       DATIFF010000184         1296 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_795176, whole genome shotgun sequence.
ACCESSION   DATIFF010000184 DATIFF010000000
VERSION     DATIFF010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_795176"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..289
                     /locus_tag="VLD58_02800"
     CDS             <1..289
                     /locus_tag="VLD58_02800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53249.1"
                     /translation="GSAGEEAGVQAGDILLALGDIAITDEDFGPKFRARFGKEDGQPL
                     PIQVERAGQRLTLNGKVRLVPRVESRMEFDPAASPKATRVREGILKGTTGP"
     gene            complement(297..893)
                     /locus_tag="VLD58_02805"
     CDS             complement(297..893)
                     /locus_tag="VLD58_02805"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0016018 - cyclosporin A binding [Evidence
                     IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSB53250.1"
                     /translation="MRFWIPLAALLACGLAAMPARPAHAQSLPRVIIRTDLGDIEAEI
                     DTIHAPVTSANFLRYVDLGFYRFGRFHRTVRADNQPTSKIKIEVVQAGLDSLRVRDFP
                     PIKLERTNVTKLLHKDGTLSMARDGPDTATSDFFICIGDQPALDYGGKRNPDGQGFAA
                     FGRVLLGMDVVRKINEAPAQGQALEPAVRILNIVRKGA"
     gene            complement(942..>1296)
                     /locus_tag="VLD58_02810"
     CDS             complement(942..>1296)
                     /locus_tag="VLD58_02810"
                     /inference="COORDINATES: protein motif:HMM:NF012951.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate--tRNA ligase family protein"
                     /protein_id="HSB53251.1"
                     /translation="DRLGQWTYHFAVVVDDLRHGIDLVVRGEDLLESTGRQLRLGRLL
                     GRAAPPVFLHHPLIRKPGGEKLSKASGDTGIRELRAAGISPAEVIGRAAHLTGLQPSA
                     APVPPDDLVKLFGQR"
BASE COUNT          194 a          426 c          478 g          198 t
ORIGIN      
        1 gggaagcgcg ggtgaggagg ccggtgtgca ggcgggcgac atcctgctgg ctctgggcga
       61 catcgccatc acggatgagg acttcgggcc caagttccgg gcccggttcg gcaaggagga
      121 tgggcagccg ctgccgattc aagtcgagcg ggccggacag cggctgactc tcaatggcaa
      181 ggtccgcctg gtgccgcggg tggagagccg gatggagttc gaccccgccg cgtcgcccaa
      241 ggcgactcgg gtgcgggagg gcatcctcaa gggcacgacg gggccgtagc gggcgctcag
      301 gcccccttcc gcacgatgtt caggatgcgc accgccggct ccagggcctg accctgggcc
      361 ggcgcttcgt tgatcttccg caccacgtcc atccccagca gcacccgccc gaaggccgcg
      421 aacccctgtc cgtcgggatt ccgcttcccc ccgtaatcga gcgccggttg gtcgccgatg
      481 cagatgaaga agtcggacgt cgccgtgtcg gggccgtctc gagccatgct cagcgtcccg
      541 tccttgtgca ggagcttggt gacgttggtg cgctcgagct tgatcggcgg gaagtcacgc
      601 acgcggagtg agtcgagtcc cgcctgcacc acctcgattt tgatcttgct cgtcggctgg
      661 ttgtcggcgc gcacggtgcg gtggaaccgc ccgaaccggt agaagcccag gtccacgtac
      721 ctgaggaagt tggccgaggt gaccggagcg tggatggtgt cgatctcggc ctcgatgtcg
      781 cccaggtcgg tccggatgat gacgcgaggc aggctctgcg cgtgtgccgg gcgcgccggc
      841 atggctgcca ggccgcaggc gaggagcgcg gcgagcggga tccagaagcg catcgggggc
      901 acgacctccg gtgacggcga atgttcgcgg gattccggat gctaacgctg accgaacagc
      961 ttgaccagat cgtcgggcgg gacgggtgcg gccgagggtt gcaaccccgt gagatgcgcc
     1021 gcccgaccga tcacctccgc gggggagatc ccggccgcgc gaagctcgcg gatcccggtg
     1081 tcgccgctgg ccttgctcag cttctcgccg ccgggcttcc ggatgagcgg atggtggagg
     1141 aacaccggcg gcgcggcgcg gcccagcagc cgccccagcc gcagctggcg gccggtggac
     1201 tccagcaggt cctcgccgcg caccaccagg tcgatcccgt gccgcaggtc gtccaccacg
     1261 acggcaaagt ggtaggtcca ttgaccgagc cggtcg
//
LOCUS       DATIFF010000185         3686 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_26644, whole genome shotgun sequence.
ACCESSION   DATIFF010000185 DATIFF010000000
VERSION     DATIFF010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3686
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26644"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..275)
                     /locus_tag="VLD58_02815"
     CDS             complement(<1..275)
                     /locus_tag="VLD58_02815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53252.1"
                     /translation="MNHDDLPLPIDFYAAARLLAYLAALILIGACTFAALVPRWRRSG
                     DDDQSLAARSLAGAWRVASVAAPVLLIAHLLRAWGQAHSFLDPEPVT"
     gene            complement(301..681)
                     /locus_tag="VLD58_02820"
     CDS             complement(301..681)
                     /locus_tag="VLD58_02820"
                     /inference="COORDINATES: protein motif:HMM:NF016149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance CopC family protein"
                     /protein_id="HSB53253.1"
                     /translation="MLRSFVIATLAAGSLLGANAAVHTHLVKAEPGVDSTVVAAPKQI
                     RLWFNEAPEVALSGATLLKADNAPIATVKMAATDDPLSVAGNIPVALEPGTYQVLWRT
                     GSKDGHAVRGKYTFKFDPAAASKP"
     gene            complement(726..1526)
                     /locus_tag="VLD58_02825"
     CDS             complement(726..1526)
                     /locus_tag="VLD58_02825"
                     /inference="COORDINATES: protein motif:HMM:NF014609.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HSB53254.1"
                     /translation="MATFPLYQVDAFADQVFRGNPAAVVPLESWLPEATLQAIAAENN
                     LAETAFFVPQGDHYHLRWFTPAHEVPLCGHATLATAFVILTLLRPDLSLVEFSTLSGM
                     LAVERGDGEFTLDFPRLDPEPVAAVPEALLRGLGSAPREVFQVTHDPNYYAVYDDESQ
                     IRALQPDLAVLATLHPFGVVITAPGRQADIVSRCFAPSYGIPEDPVTGSIHCALVPYW
                     SARLGRDQITAWQASPRGGRLRCRALRDRVFLTGTAVLYLQGTIGIPL"
     gene            complement(1556..>3686)
                     /locus_tag="VLD58_02830"
     CDS             complement(1556..>3686)
                     /locus_tag="VLD58_02830"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HSB53255.1"
                     /translation="VLSGLLAGTAMEPVPVGAEQVVLAPVARAAQPDDPPNARAVPLE
                     TIVVTGSAAGSTRRPLPYAVDVVSGEELRAFNATTLSSALDGAVPGVWLWSQSPSSLL
                     TSYASLRGASSFGLSYPKVYIDGIEVANPLLLTGLEPDAIERIEVIRGPQGAALYGAD
                     AISGVMNIVTRQGAADPDAARVSAQSRVGLAETDYATGAVVDQRHALSVRIGNNLRAA
                     SLHASLGTVGDFTPGASTTRFGLQGGLRAVGARTIWSGLVRLNVDDSKAAASPLLPDS
                     LLRPALRGIQSQSVLGYTIGTTLKVIPSERWTHTFMVGLDGYTLDGVADDRAPIISAA
                     DSALRAAEGGAVRGSIRLGTLRRFAIGATTRADLGLSVEHSVLHQWSRSDSTPASASP
                     SWRNTTGASLLGNLELAAKVFLSGGARVEGTTDNDPQLVPMLGATLVQGAGPLTVKLR
                     GSWGRGVRWPFTPARRTLFGDIGPELLPANLEPEEQSGFEAGIDLLAGGNFSAGVTRF
                     DQTASGLIQRVAIPLDSTGGPFQRRRIAYQYQNVGEIGNSGWELSASVGRRGFSLAGA
                     LSFVDSRVEKVANRYRGDLQAGDRMLEVPARTMSLSARWRDARWSLAVGASRAEDWVD
                     YDRLALASAFAGGGPGQRFTGSELRQYWRTYPGVTRLRASASRTLGRALRVTLSGENL
                     LNQQTGEPDNLTVLPGRTLSLGIWAGL"
BASE COUNT          624 a         1179 c         1370 g          513 t
ORIGIN      
        1 caggtgaccg gctccgggtc caggaaggag tgggcctggc cccaggcccg cagcaggtgc
       61 gcgatcagga ggaccggtgc cgcgacactc gcaacccgcc aggcgccggc gaggctgcgg
      121 gccgccagac tctgatcgtc atcgccactg cggcgccagc gaggcaccag cgcggcgaag
      181 gtacaggccc caatcaggat caacgccgcg aggtaggcca gcaacctcgc ggcggcgtag
      241 aagtcgatcg ggagcgggag atcgtcgtgg ttcacagggt gcggagcacg accgcccggt
      301 tcagggcttg gacgcggccg cgggatcgaa cttgaaggtg tacttgcccc gcaccgcgtg
      361 gccatccttg gagccggtac gccacaggac ctggtaggtg ccgggttcga gcgccacggg
      421 aatgttgccg gccaccgaga ggggatcatc cgtcgcggcc atcttcacgg tggcaatggg
      481 ggcgttgtcg gccttgagca gggtggcgcc ggaaagggcg acctcggggg cctcgttgaa
      541 ccagaggcgg atctgcttcg gcgcggcgac cacggtggaa tcgacccccg gttcagcctt
      601 caccaggtga gtatggaccg cggcattggc cccgagcagg gagccggccg ccagcgtcgc
      661 aataacgaaa gaacggagca tcagtcgcaa tagccgttaa aggtgacgcg gaaaggtaaa
      721 cggtctcaga gcgggatgcc gatggtgccc tggaggtaca acacggcggt tccggtcagg
      781 aagacgcggt cgcggagtgc ccggcagcgc agccgtccgc cccgggggga agcctgccag
      841 gctgtgatct ggtcccggcc aaggcgggcg gaccagtaag gtacgagggc gcagtgaatc
      901 gagccggtga ccgggtcctc ggggatgccg tagctcgggg caaagcagcg tgacacaatg
      961 tcggcctggc gccccggagc cgtgatcacg accccgaagg gatgcagggt ggcgaggacc
     1021 gcgagatcgg gctggagtgc acggatctgg ctctcgtcgt cgtagacagc gtagtagttg
     1081 gggtcgtggg tgacctgaaa gacctcccgc ggtgccgacc ccagtccgcg gagaagcgcc
     1141 tcgggaacgg cagccaccgg ctccgggtcg agccgcggga agtcgagggt gaactcgcca
     1201 tcaccccgct cgacggccag catgccgctc aaggtcgaga actccaccag cgacaggtcc
     1261 gggcggagca gcgtgaggat cacaaaggcc gtggcaaggg tggcgtggcc gcagagcggc
     1321 acttcgtgcg ccggggtgaa ccagcgcaga tggtagtgat cgccctgggg aacgaagaac
     1381 gcggtctcgg cgaggttgtt ctccgccgcg atagcctgga gcgtggcttc cgggagccac
     1441 gactcgagcg gaaccacggc agcggggttc ccgcggaaga cctgatcggc aaaggcgtcg
     1501 acctgataga gcgggaatgt ggccatgtcc cgaggctcga gtgacgagtt atacgctata
     1561 gcccggccca gatgcccagg ctcagcgtcc ggccgggaag cacagtgagg ttgtccggtt
     1621 cgccggtctg ctggttgaga aggttctccc cactcagcgt gacgcgcaat gcgcggccca
     1681 gcgtgcgtga ggcggaggcg cggaggcggg tgacaccggg ataggttcgc cagtactggc
     1741 gcaactcgct gccggtgaaa cgctgccccg gccctccgcc ggcaaaggcg gaggccaaag
     1801 ccaggcggtc gtagtcgacc cagtcttcgg cgcggctcgc gcccacggcg agtgaccagc
     1861 gggcgtcacg ccagcgggcg gaaaggctca tggtgcgggc cgggacctcc agcatgcggt
     1921 cacccgcctg gaggtctccg cggtagcggt ttgccacctt ctccacccgg ctgtccacga
     1981 acgacaatgc gcccgccagg gaaaacccgc ggcgtcccac cgatgcgctg agttcccacc
     2041 cgctgttgcc gatctcgccc acgttctgat actgatacgc aatccggcgc cgctgaaacg
     2101 gcccgccggt tgagtcgagt gggatggcga cgcgctgaat caggccggac gccgtctggt
     2161 cgaatcgggt gacgccggcg ctgaagttgc cgcccgccag cagatcgatc ccggcttcga
     2221 accccgactg ttcttccggt tcgagattcg ccgggagaag ctccggcccg atgtcaccga
     2281 aaagagttcg ccgggccggc gtgaacggcc agcgcacccc gcggccccag gagccgcgca
     2341 gcttcacggt gagcgggcca gccccctgga ccagcgtcgc gcccagcatc gggaccagtt
     2401 ggggatcgtt gtcggtcgtg ccctcgaccc gggcgccgcc agagagaaag accttcgccg
     2461 ccagctccag attgccgagc aggctcgcgc cggtagtgtt ccgccacgag ggcgaggccg
     2521 aggccggagt gctgtcggac cgggaccatt gatgcaggac ggagtgctcc acactgaggc
     2581 cgaggtcggc ccgggtggtg gccccgatcg cgaatcgccg cagcgtgccc agcctgatac
     2641 tgccgcggac ggcaccgccc tcggccgcgc ggagagcgga gtcggccgcg gagatgatcg
     2701 gggcgcggtc gtcggccacg ccatcgaggg tgtagccgtc gaggccgacc atgaaggtgt
     2761 gagtccagcg ttcgctcggg atgaccttga gcgtcgtccc gatggtgtag ccgagcaccg
     2821 actggctctg gataccgcgg agcgcgggac ggaggagcga gtcgggaagg agcggactcg
     2881 ccgccgcctt cgagtcgtcg acgttgagac gcaccagtcc gctccagatg gtcctggcgc
     2941 cgaccgcgcg gagaccgccc tggagcccga accgggtggt ggacgcgccg ggggtgaaat
     3001 caccgacggt gccgagcgaa gcgtggagcg atgcggcgcg gagattgttg ccgatgcgga
     3061 ccgacagggc gtgccgctgg tccaccaccg cgccggtggc atagtcggtt tcggcgagcc
     3121 ccacccggct ctgggcgctg acgcgcgcgg cgtcggggtc cgccgccccc tggcgggtga
     3181 cgatgttcat cacgccgctg atcgcatcgg cgccgtagag cgccgctccc tggggacccc
     3241 ggatcacctc gatccgctcg atggcgtccg gctcgagacc ggtgagcaga agtgggttgg
     3301 ctacttcgat cccatcgatg tacaccttgg gataactgag cccgaacgag ctggctccgc
     3361 gcagactggc gtagctggtg agcaggctgc tgggcgattg ggaccagagc cagacgcccg
     3421 gaacggcgcc atcgagtgcg gaggagaggg tggtggcgtt gaaggcacgg agctcttctc
     3481 cgctaactac atcgacggcg tacggcagcg gccggcgggt ggagccggcg gcgctgccgg
     3541 tgaccacgat ggtttcgagc ggaaccgcgc gggcgttggg tggatcatcc ggctgggccg
     3601 cccgggccac cggcgcgagc acgacctgct cggcgcccac cggcaccggc tccatggcgg
     3661 tgccggcgag gaggcccgac agcacc
//
LOCUS       DATIFF010000186         1013 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_488094, whole genome shotgun sequence.
ACCESSION   DATIFF010000186 DATIFF010000000
VERSION     DATIFF010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_488094"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1013
                     /gene="carB"
                     /locus_tag="VLD58_02835"
     CDS             <1..>1013
                     /gene="carB"
                     /locus_tag="VLD58_02835"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HSB53256.1"
                     /translation="TQAVRALKEEGYRVILVNSNPATIMTDPELADRTYIEPVTPEWV
                     ARIIERERPDALLPTMGGQTALNVAMALANDGTLARFGVELIGADARAIGLAEDREQF
                     GLAMARLGLATPAGRTVRSMEEALEAVARTGYPAIVRPSFTLGGTGGGIAYNREEYEA
                     LIGRGLELSPVGSVLVEQSVIGWKEFELEVMRDGADNVVIVCSIENIDPMGVHTGDSI
                     TVAPAMTLTDREYQQMRDSAIKIIREIGVAAGGCNIQFAVDPETGEQLVIEMNPRVSR
                     SSALASKATGFPIARIGTKLAVGYRLDELPNDITKTTPASFEPVLDYVVVKCPRFAFE
                     KFP"
BASE COUNT          168 a          347 c          353 g          145 t
ORIGIN      
        1 ggacgcaggc ggtgcgggcg ctcaaggagg agggataccg ggtcatcctc gtcaactcga
       61 atcccgccac gatcatgacc gatccggagc tggcggatcg cacctacatc gagccggtca
      121 cccccgagtg ggtggcccgg atcatcgagc gggagcggcc ggacgccctc ctgccgacaa
      181 tgggcgggca gacggcgctc aacgtggcga tggcgctggc caacgacggc acgctcgcca
      241 ggttcggcgt ggagctcatc ggcgccgacg cccgcgccat cggcctggcc gaggaccggg
      301 agcagttcgg cctggccatg gcgcggctgg gcctcgccac gccggcgggc cgcaccgtcc
      361 ggagcatgga ggaggccctc gaggcggtgg cccgcaccgg gtatcctgcc atcgtccggc
      421 cctcgttcac cctcggcggc accgggggcg gcatcgccta caaccgcgag gagtacgagg
      481 cgctgatcgg gcgcgggctc gaactgtcgc cggtgggctc ggtgctcgtc gagcagagcg
      541 tgatcggctg gaaggagttc gagctggagg tgatgcggga cggggcggac aacgtggtga
      601 tcgtctgctc catcgagaac atcgacccga tgggcgtgca caccggcgac tcgatcaccg
      661 tcgcccccgc gatgacgctc accgaccgcg aataccaaca gatgcgcgac tcggccatca
      721 agatcatccg cgagatcggc gtcgccgcgg gcggctgcaa catccagttc gcggtcgatc
      781 ccgaaaccgg cgagcagctg gtgatcgaga tgaacccccg ggtgtcccgt tcctcggcgc
      841 tggcctccaa ggcgaccggc ttcccgatcg cccggatcgg gaccaagctc gcggtcggct
      901 atcgcctcga cgagcttccc aacgacatca ccaagaccac gccggcgtca ttcgaaccgg
      961 tgctggacta cgtggtggtg aagtgccccc ggttcgcctt cgagaaattt ccc
//
LOCUS       DATIFF010000187         1070 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_26882, whole genome shotgun sequence.
ACCESSION   DATIFF010000187 DATIFF010000000
VERSION     DATIFF010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26882"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1070)
                     /locus_tag="VLD58_02840"
     CDS             complement(<1..>1070)
                     /locus_tag="VLD58_02840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53257.1"
                     /translation="GNLIYTRKILAPVGAVKLTGKVAGLNVGYLGAVDDTSGSFNLES
                     HPVYNILRVQRDVGRASRAGLVYTDKEDGGASNRVLGADARLVMGPRWSLAVNGAVGR
                     TARPGAPLLTAPRWSGILSRSGRTFGARYAVTGMHPDFRADAGLVSRSNVVDAAATHS
                     LSAYGREGSRIQKASLDVLVNGTWTYHDFLTSRRALEEKLHFNGNLQLRGGWHVGASV
                     LFESFGFDPDFYRGYAIERHSGSTVDTIPFTGTPRLPNLDYVLSLDTPQFRHWSLSLF
                     YLWGKDENFFEWSSANIGLLTLDAQWRPTDRLRAEGSYIWQFYHRRTDGTTVGQGRIP
                     RLKIEYQLTRSMFLRVVGQYTA"
BASE COUNT          165 a          366 c          372 g          167 t
ORIGIN      
        1 ttgcggtgta ctggcccacc acccggagga acatcgaccg ggtcagctga tactcgatct
       61 tgaggcgagg aatcctcccc tgccccaccg tcgtcccgtc ggtccgccgg tggtagaact
      121 gccagatgta gctcccctcc gcccggagcc ggtcggtggg gcgccactgt gcgtcgaggg
      181 tgaggagccc gatgttggcg ctcgaccact cgaagaagtt ctcgtccttc ccccagagat
      241 agaacaggct cagcgaccag tgccggaact gcggggtgtc gaggctgagc acgtagtcga
      301 ggttggggag ccgcggcgtg ccggtgaagg ggatggtgtc caccgtgctg ccggaatgcc
      361 gctcgatcgc gtacccccgg tagaaatcgg gatcgaagcc gaacgactcg aacagcaccg
      421 aagccccgac gtgccatccg ccccggagct ggaggttgcc gttgaagtgg agcttctcct
      481 cgagggcgcg gcggctggtc aggaaatcat ggtacgtcca ggtgccgttc accagcacgt
      541 cgagcgacgc cttctggatc cggcttccct cccggccata ggccgagagg ctgtgggtcg
      601 cggcggcgtc caccacgttg gagcgtgaga ccagccccgc gtcggcgcgg aaatcggggt
      661 gcatcccggt gaccgcgtag cgcgcgccga aggtgcggcc gctccgggag aggatcccgc
      721 tccagcgggg cgcggtgagc agcggcgcgc cggggcgcgc ggtccggccc accgcgccgt
      781 tcaccgcgag gctccaccgg gggcccatca ccaggcgcgc atcggcgccc agcacgcggt
      841 tcgacgctcc gccatcctcc ttgtcggtgt acacgagccc cgcccgcgag gcgcggccca
      901 cgtcgcgctg gacccggaga atgttgtata ccggatggct ctcgagattg aacgatccgc
      961 tcgtgtcgtc caccgcgccg aggtagccca cgttgagccc ggcgaccttg ccggtcagct
     1021 tcaccgcgcc gaccggcgcg aggatcttcc gggtgtagat caggttcccc
//
LOCUS       DATIFF010000188         1280 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_334292, whole genome shotgun sequence.
ACCESSION   DATIFF010000188 DATIFF010000000
VERSION     DATIFF010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1280
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_334292"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1194)
                     /locus_tag="VLD58_02845"
     CDS             complement(<1..1194)
                     /locus_tag="VLD58_02845"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB53258.1"
                     /translation="MEHSLSTPYGQARPRAERFSFRRLGLVAGLDLKESLSRPLFLIF
                     ALIMLWNGYLMSRGSWIFRSIDTSLGGNKAWADSEFQTAYVYALISFFMISFFVAVAA
                     GMPLIRDAEQKVGDLLHSTPLRPAEYVWGKFLAALLAAFAAVLVLPVSTGLLTHLLPD
                     PGSPEIYGPFHLMAYVRPLLVFLMPAVVFTAGVSFALGRWTGRPILVFLFPVLVFLLC
                     NTYLWGTYPPRVSEGVSDILRYLDPSGFRWLKERWLLTDRGIAFYNTRPIAFDAPFLL
                     SRIGFAAAGLLLVDLSRRHFAGRLRRPARVRRLETAAPAAAPARTLSILGMTSRPVGF
                     LRGAWAVTRFELQELIAQPGLYIFIPFILLFLYTLYRDARGGEFGAPFLWTPGTAAAM
                     GLPYLT"
BASE COUNT          251 a          378 c          497 g          154 t
ORIGIN      
        1 cgtgaggtag ggcaatccca tggccgccgc cgtgcccggc gtccacagga agggggcgcc
       61 gaattcgccc ccccgggcat cccggtagag ggtgtagagg aagagcagga tgaacgggat
      121 gaagatgtag agcccgggct gcgcgatcag ctcctggagc tcgaagcggg tcaccgccca
      181 ggcgccgcgg aggaagccca ccgggcgcga ggtcatgccc aggatggaca gggtccgggc
      241 cggcgccgca gccggagcgg cggtctcaag ccgccggacg cgggccggcc ggcgcaggcg
      301 ccccgcgaaa tggcggcggg agagatcgac caggagcagc cccgcggcgg cgaatccgat
      361 ccggctcagc aggaagggag cgtcgaaggc gatcggccgc gtgttgtaga aggcgatccc
      421 acggtcggtc agcagccagc gctccttgag ccagcggaag ccggatggat cgagatagcg
      481 caggatgtcc gagacccctt cgctgacgcg cggcggatag gttccccaca ggtaggtgtt
      541 gcagagcagg aagacgagca ccgggaagag gaagaccagg atcggacggc cggtccagcg
      601 tccgagcgcg aagctcactc ccgccgtgaa gaccaccgcc ggcatcagga ataccaggag
      661 cggccggacg taggccatga ggtggaacgg gccgtagatc tcggggctgc cggggtccgg
      721 aaggagatgg gtgagaaggc ccgtgctcac cggcagcacc agcacggccg cgaaggcggc
      781 gagcagcgcg gcgaggaatt tcccccagac gtattcggcg gggcgcaggg gcgtcgaatg
      841 cagcaggtcc cccaccttct gctcggcgtc gcggatcagg ggcatgccgg ccgccaccgc
      901 gacgaagaac gagatcatga agaagctgat cagagcgtag acgtaggcgg tctggaactc
      961 ggaatcggcc caggccttgt tgccgccgag cgaggtgtcg atcgagcgga agatccagga
     1021 gccgcgggac atcaggtagc cgttccacag catgatcagc gcgaagatca ggaacagcgg
     1081 ccggctgagg ctctccttga gatcgagccc ggcgaccagg ccgaggcggc ggaagctgaa
     1141 ccgctccgcg cgcgggcggg cttggccgta gggggtggac agcgagtgtt ccatagggtg
     1201 gtgagcctcc caggaccact acggtagttg ggggggtggg gttgcagtgg cgagcgggtt
     1261 caagaggctt tgatccgacc
//
LOCUS       DATIFF010000189         1098 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1411608, whole genome shotgun sequence.
ACCESSION   DATIFF010000189 DATIFF010000000
VERSION     DATIFF010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1411608"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..333
                     /locus_tag="VLD58_02850"
     CDS             <1..333
                     /locus_tag="VLD58_02850"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018052517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HSB53259.1"
                     /translation="GPLEVRSVVDLWRGADWLEREVYDMFGITFAGHPDLRRILMWET
                     YAEGYPLRKDFPLRGHFSRAEQTRQALAANPEANYSLEELSIADSFRELPADMRERLQ
                     RGERGYLR"
     gene            330..>1098
                     /locus_tag="VLD58_02855"
     CDS             330..>1098
                     /locus_tag="VLD58_02855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53260.1"
                     /translation="MSLRTVEFALATPGLDREGRPTRLPLGVEGGTAPGYAEDFGAEH
                     MLVNIGPQHPATHGVLRLVIELEGEVVVRCIPHVGYLHSGFEKLGEYRHYNQIVPLTD
                     RTDYLSPMANNVCLALAAEKLMGIECTERCQVLRVIACEMSRIISHLVWLGTTGIDLG
                     AFTPFLWSFQERERIYNLQEMWTGARLTTSLTRVGGLMADIPDGFEEGLREFTRSFPD
                     TLREVDTMFTRNAIWIGRTQGVGALSAEEATNYSLSGP"
BASE COUNT          172 a          398 c          368 g          160 t
ORIGIN      
        1 gggccgctgg aggtgcgctc ggtggtggac ctgtggcgcg gggccgattg gctggagcgc
       61 gaggtctacg acatgttcgg catcaccttc gccggacacc ccgacctgcg gcggatcctg
      121 atgtgggaga cctacgcgga agggtacccg ctgcggaagg acttccctct ccgcggccac
      181 ttcagccggg cggagcagac ccggcaggcc ctggcggcca atccggaagc caactactcc
      241 ctggaagaac tctccatcgc cgactcgttc cgcgagctgc ccgccgacat gcgggagcgg
      301 ctccagcggg gcgagcgggg ctacctgcga tgagcctccg taccgtcgag ttcgccctcg
      361 ccacccccgg cctcgaccgc gaggggcggc ccacccggct gcccctcggc gtcgagggcg
      421 gcaccgcgcc aggctatgcc gaggacttcg gcgccgagca catgctggtg aacatcggcc
      481 cacagcaccc ggccacccac ggcgtcctcc gcctggtgat cgagctggag ggcgaagtgg
      541 tggtgcgctg catcccccac gtgggctacc tccactccgg gttcgagaag ctgggcgagt
      601 accggcacta caaccagatc gtgccgctga ccgaccgcac cgactacctc tcccccatgg
      661 ccaacaacgt gtgcctggcg ctggcggcgg agaagctcat ggggatcgag tgcaccgagc
      721 ggtgccaggt gctccgggtg atcgcctgcg agatgagccg gatcatctcc cacctcgtct
      781 ggctcggcac caccggaatc gacctcggcg cgttcacccc gttcctctgg tcgttccagg
      841 agcgggagcg gatctacaac ctgcaggaga tgtggaccgg ggcccggctc accaccagcc
      901 tcacccgggt gggcggcctc atggccgaca tccccgacgg gttcgaggag ggcctccgcg
      961 agttcacccg gagctttccc gacaccctcc gcgaggtgga caccatgttc acccgcaacg
     1021 cgatctggat cggccggacc cagggcgtcg gggccctcag cgcggaggag gccaccaact
     1081 actcgctctc ggggccga
//
LOCUS       DATIFF010000190         2745 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_181090, whole genome shotgun sequence.
ACCESSION   DATIFF010000190 DATIFF010000000
VERSION     DATIFF010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2745
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181090"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1847)
                     /locus_tag="VLD58_02860"
     CDS             complement(<1..1847)
                     /locus_tag="VLD58_02860"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB53261.1"
                     /translation="MSQERPRSSRQRYRAFVEDYRHRRLDDSIESGEPKPPVDGAEAP
                     ALKPKGQRREYLREYLRWLRPYWLAVAAVFLLALVVAGLQMVEPLFMRFIIDRVLLKP
                     GLDRSARLLLLNVAGAAFVGVILGSNLLGVLKDYRQRILNVRVILTLRQALFDRLLHL
                     PLPKLWDMKTGGILSRLTGDVETTTGLLQMAIVSPAISLVRLIIAIVVLLTLNWRLAL
                     MALAVIPGAMLMSFTFARRIRPIYRVVRKDVELIDGRVGETFSGIRVVRAFGREIFEL
                     LDYMRGRHTVLRKELFAHRRELLLWTSWGLLVAGVNVVIVWFGGYLNVVGRASIGDIM
                     AFQWYTFLLMNPVWNIVNSFSELQRSLAAMERVFEVLGMADDKPDAPGARAAPTVVER
                     LEFEGVEFEYRPGRPVVRDFHVVVKGGTVVALVGRSGAGKTTVTDLVARFHDPTRGRI
                     LLNGTDIREFRLRSYRDLLAIVQQDVFLFDGSVRDNIAYGRHSATDAEVEDAARRANA
                     HEFIDRLPDRYETFVGERGVKLSGGQQQRLAIARAILADPQILILDEATSNLDTESEQ
                     LIQASMAELLAGRTTFMIAHRLSTIRRADLILLMEDGRVIERGTHEELM"
     gene            complement(1912..>2745)
                     /locus_tag="VLD58_02865"
     CDS             complement(1912..>2745)
                     /locus_tag="VLD58_02865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53262.1"
                     /translation="ILMALLVKLPVRAVGIFGLAVIVLHNLFGGPLVGLAQAHGGDAL
                     GALLRILYVGFWAGPIRLGPQGPNLVVLYSIIPWIGVMAAGYAFARVLTLEAPHRNRL
                     CLRIGLGAVLLFLVLRGFNLYGDPSPWSAAPGEPGAPRMPAPLAFLNTSKYPASLLFL
                     LMTLGPTIALIPLLERAKGGVARLITVYGRVPFFYYMLHIPLIHALALLVSRARSGAI
                     DPWLFTNHPMGNPPPPEGYPWGLPLLYLVWLVALAILYPICRWFAGVKARRDEWWLRY
                     L"
BASE COUNT          480 a          909 c          986 g          370 t
ORIGIN      
        1 ctcatcagct cctcgtgggt gccgcgctcg atcaccctcc cgtcctccat gagcaggatc
       61 aggtcggcgc ggcggatggt cgagagccgg tgcgcgatca tgaacgtggt ccggccggcc
      121 aggagctcgg ccatcgacgc ctggatgagc tgctcgctct cggtgtcgag gttgctggtg
      181 gcctcgtcga ggatcaggat ctgcggatcg gccaggatcg cccgcgcgat ggccaggcgc
      241 tgctgctgcc cgccggagag cttgaccccg cgctcgccga cgaaggtctc gtagcggtcg
      301 gggagtcggt cgatgaattc gtgggcgttg gcccggcggg cggcgtcctc cacttcggcg
      361 tcggtcgcgc tgtgccgccc gtaggcgatg ttgtcgcgca ccgagccgtc gaagaggaag
      421 acgtcctgct gcacgatcgc gaggagatcg cggtagcttc gcagccggaa ctcgcggatg
      481 tcggtgccgt tgaggaggat ccggccccgg gtcggatcgt ggaaccgggc cacgaggtcg
      541 gtgacggtgg tcttccccgc cccgctgcgg ccgaccagcg ccacgaccgt ccctcccttc
      601 accaccacgt ggaagtcgcg caccaccggc cgccccgggc ggtattcgaa ctccacgccc
      661 tcgaactcga gacgctccac caccgtgggg gcggcgcgcg cgccgggggc gtcgggcttg
      721 tcgtccgcca tgcccaggac ctcgaacacc cgctccatgg cggcgaggga gcgctgcagc
      781 tcggagaacg agttgacgat gttccagacc gggttcatca gcaggaaggt gtaccactgg
      841 aaggccatga tgtcgccgat ggaagcgcgg cccaccacgt tgaggtagcc cccgaaccag
      901 acgatcacca cgttgacccc cgccaccagg agcccccacg aggtccagag cagcagctcg
      961 cgccggtggg cgaagagctc tttccggagc accgtgtggc gcccgcgcat gtagtcgagc
     1021 agctcgaaga tctcgcggcc gaaggcgcgg accacccgga tgccggagaa ggtctccccc
     1081 accctcccgt cgatcagctc gacgtccttc cgcaccaccc ggtagatcgg gcggatccgc
     1141 cgcgcgaagg tgaagctcat gagcatcgcg ccggggatga ccgccagcgc catcagcgcc
     1201 agccgccagt tgagggtcag cagcaccacg atggcgatga tcaggcgcac caggctgatg
     1261 gcgggggaaa cgatggccat ctggaggagc ccggtcgtcg tttcgacgtc gccggtcagc
     1321 cgggagagga tgcccccggt cttcatgtcc cagagcttcg ggagcggcag atgcagcagg
     1381 cggtcgaaga gcgcctggcg cagggtgagg atgacccgga cgttgaggat gcgctgccgg
     1441 taatccttga ggacgccgag cagattggag ccgaggatca ccccgacgaa cgcggcgccg
     1501 gccacgttga gcagcagcag gcgggcgctc cggtcgagcc ccggcttgag caggacccgg
     1561 tcgatgatga accgcatgaa gagcggctcg accatctgga gcccggccac caccagcgcc
     1621 agcaggaaca ccgccgccac ggcaagccag tatggccgga gccagcggag gtactcgcgc
     1681 aggtattccc gccgctggcc cttcggcttc agagcggggg cctcggcccc gtccaccggc
     1741 ggcttcggct cccccgactc gatggagtca tccagccggc ggtgccggta gtcctcgacg
     1801 aaggcgcgat agcgctggcg ggaggaccgc ggccgctcct ggctcatcgc ggagcgcccc
     1861 ggcctggcac cacgggttcg cggagactgc cggcgccgga atcagcgcct tctagaggta
     1921 cctcagccac cactcatccc tccgtgcctt cacgccggcg aaccagcgac agatgggata
     1981 gaggatagcc agggccacaa gccagacgag atagaggagc gggagccccc aagggtaccc
     2041 ctccggcggg ggcgggttgc ccatcggatg gttggtgaac agccagggat cgatcgcacc
     2101 cgagcgggcg cgggagacca gcagcgcgag ggcgtggatg agggggatat ggagcatgta
     2161 gtagaagaac ggcacccgcc cgtacacggt gatcaggcgg gctactccgc ccttcgcccg
     2221 ttcgagcagc ggaatgaggg cgatggtggg gcccagcgtc atcagcagga agaggagcga
     2281 tgccgggtat ttcgacgtgt tgaggaaagc gagcggcgcc ggcatccgcg gcgcgcccgg
     2341 ttccccaggc gccgcgctcc aggggctggg atcgccgtag agattgaacc cccgaagtac
     2401 gaggaagagg agcactgccc ccaggccgat gcggagacag agccggttcc ggtgcggcgc
     2461 ctccagcgtg agcacccggg cgaaggcgta gccggcggcc atcacgccga tccagggaat
     2521 gatcgaatag agcaccacca ggttgggccc ctgcgggccg aggcggatcg ggccggccca
     2581 gaagccgacg tagaggatcc tgagcagggc accgagggcg tcgccgccgt gcgcttgcgc
     2641 gaggccgacg agcggtccgc cgaacaggtt gtgcaggacg atgaccgcga gaccgaagat
     2701 gccgaccgcc cggaccggga gcttgaccag cagggccatc aggat
//
LOCUS       DATIFF010000191         2175 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1565402, whole genome shotgun sequence.
ACCESSION   DATIFF010000191 DATIFF010000000
VERSION     DATIFF010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1565402"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..757)
                     /locus_tag="VLD58_02870"
     CDS             complement(<1..757)
                     /locus_tag="VLD58_02870"
                     /inference="COORDINATES: protein motif:HMM:NF013073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HSB53263.1"
                     /translation="MTTTSIVARSGVVPVKREPNLRSEQVTQLVLGETARVLETQGDW
                     RRVRLEVDRYEGWVHRGYVLETDHEIARGWKDTAIGWSEGAVVRTETGTIVRLPVRAR
                     VGFAAPRVDLPDGSQGTVIAGSILPYERVKARARAVTPDLWALKTYAGTPYQWGGVTP
                     WGVDCSGLVQTTFLARGISLPRDASQQVAEGNAVAPGDEREGDLLFFAERGDKITHVA
                     LAGPSGTLVHSTVALGGLVMEPWGPGSRAMMLRA"
     gene            complement(754..915)
                     /locus_tag="VLD58_02875"
     CDS             complement(754..915)
                     /locus_tag="VLD58_02875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53264.1"
                     /translation="MKPEIHERDMMVCRACGREERASEGYPCEICGTFICVVCTNKGV
                     VRCKDCEER"
     gene            complement(1045..>2175)
                     /locus_tag="VLD58_02880"
     CDS             complement(1045..>2175)
                     /locus_tag="VLD58_02880"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSB53265.1"
                     /translation="SVILLTGHGDVSTAVQAMQLGAENFLTKPMDLEHLLAAVARVAD
                     KVRLKRLNELLLLRTAPGEAGLETLGNSPAMRELIKQAGLVALAERTPVLLKGESGVG
                     KGWLARMLHQLSPRASGPFVEVSGYGQSPAALEADLFGLERATEQDGRERRPGMVEVA
                     AGGTMFIEEVADLPAEIQPRLLRLLETRTFRRVGGTKELASDVRVIAATSRDLGAMVD
                     GGSFREDLAYRLNVTPLTLPPLRDRPKEDRLSVLLSLVNELQRQVSGAPAAVGPEALE
                     RLLAHGWPGNVREMRNVLERALILARGQMSVGIEHLPGEFRARPGPGDRRHTPMTLDE
                     LERAHIERTLRHHTGNRTRAAQELGISRATLINKIKRYAIQL"
BASE COUNT          322 a          804 c          721 g          328 t
ORIGIN      
        1 gggcccgcag catcattgcg cgggagccgg gcccccaggg ctccatcacc agacccccca
       61 gcgccaccgt cgagtgcacc agggtgcccg acggccccgc gagggcgaca tgggtgatct
      121 tgtcgccccg ctcggcgaag aagaggaggt cgccctcgcg ctcatcgccc ggcgcaaccg
      181 cattgccctc ggccacctgc tgcgaggcat cgcggggcag cgaaataccc cgggccagga
      241 aggtggtctg caccaggccg gagcagtcga cgccccacgg tgtgacgcca ccccactggt
      301 acggtgtgcc ggcgtaggtc ttgagggccc agagatcggg agtgaccgct ctcgcgcggg
      361 ccttgacccg ttcgtagggc agaatgctcc cggcaatgac cgtcccctgg gaaccgtcgg
      421 gaagatcgac gcggggcgcc gcgaatccca cccgcgcccg caccggcagg cggacgatgg
      481 tgcctgtctc ggtgcgcacc acggcgccct cgctccagcc aatcgcggtg tccttccacc
      541 cccgggcgat ctcgtgatcg gtctcgagca cgtagccgcg gtggacccag ccttcatagc
      601 ggtccacctc gagccgcacc cggcgccagt cgccctgcgt ttccaggacc cgggccgtct
      661 cgcccaacac cagctgagtc acctgctcgg agcggagatt cggttcccgc ttgacgggca
      721 ccactccgga ccgcgcgacg atggaggtgg tggtcaccgt tcctcgcaat ccttgcagcg
      781 gaccacgccc ttgttggtgc agaccacgca gatgaaggtg ccgcagatct cacagggata
      841 gccttccgag gcgcgctcct cccggccgca ggcccggcag accatcatgt cgcgttcgtg
      901 gatttccggt ttcatggtga gctccttgtc aggcggcaaa gcgcaaggcg gcaaagcggc
      961 aaagcggcaa agcggccagt actacccatg acgctccgtc cagcattgtc gcggcggtca
     1021 ccggccgcct tgccgccttg ccgcctataa ctgtattgca taccgcttga tcttgttgat
     1081 cagcgtcgca cgggagatgc cgagctcctg cgcggcgcgg gtccggttgc cggtgtgatg
     1141 ccgcagggtc cgctcgatgt gggcccgttc gagctcatcc agcgtcatgg gcgtgtggcg
     1201 ccggtcgccg gggccgggcc gggcccggaa ctctcccggc aggtgctcga tcccgaccga
     1261 catctggccc cgcgcgagaa tcagggcccg ctccagcacg ttgcgcatct cgcgcacgtt
     1321 tcccggccag ccgtgcgcca gcaggcgctc gagcgcctcc gggcctaccg cggccggcgc
     1381 gcccgagacc tggcgttgca gttcattcac cagcgagagc agcaccgaga ggcggtcttc
     1441 cttggggcgg tcgcgcagcg gcggcagcgt gagcggcgtg acgttgagcc ggtaggccag
     1501 gtcctcgcgg aagctcccgc cgtcgaccat cgcgccgaga tcgcgggagg tggcggcgat
     1561 cacccgcaca tcgctggcca gctccttggt gccgcccacc cgccggaacg tcctcgtctc
     1621 cagcaggcgg agcaggcgcg gctggatctc ggcggggaga tcggcgacct cctcgatgaa
     1681 catggtgccg ccggcggcga cctcgaccat gcccgggcgc cgctcccgcc catcctgctc
     1741 cgtggcccgc tcgagtccga agagatcggc ttcgagcgcc gccggcgact ggccgtagcc
     1801 gctcacctcg acgaagggac ccgaggcccg cggactcagc tgatgcagca tccgcgcgag
     1861 ccagcccttc cctaccccgc tctcgccctt gagcagcacc ggggtgcgtt ccgccagcgc
     1921 cacaaggccc gcctgcttga tcagctcgcg catcgccggc gaattgccca gcgtctccag
     1981 gcccgcttcg cccggcgcgg tccggagcag gaggagctcg ttgagccgct tgagccggac
     2041 cttgtcggcc acccgcgcca ccgccgccag caggtgctcg aggtccatcg gcttggtcag
     2101 aaaattctcc gcccccagct gcatcgcctg caccgcggtg gacacgtcgc catggccggt
     2161 caggagaatg accga
//
LOCUS       DATIFF010000192         1457 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1412159, whole genome shotgun sequence.
ACCESSION   DATIFF010000192 DATIFF010000000
VERSION     DATIFF010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1457
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1412159"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..903)
                     /locus_tag="VLD58_02885"
     CDS             complement(<1..903)
                     /locus_tag="VLD58_02885"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSB53266.1"
                     /translation="MPTARRTHTFTESVIRGMTRLAAEHGAINLAQGFPNFPAPEVLK
                     EAAAAAIRADINQYAITWGSKRLRDAIAKKYFEWYGMEVNTETELTVTCGATEAMASV
                     FLALIDPGDEVIVFEPFYENYGPDAILCDAKPVFLPLMPGQPLDLDRLASAFSNRTRA
                     IVVNTPGNPSGRVLTRAELEGIADLCRKHDAWAVTDEIYEHIRYSGEHLPIATLPGMR
                     ERTITISGASKTFSITGWRIGTIVAPAGVTDAIRKVHDFLTVGAPAPLQEGIAVAIET
                     LGRDYYAGLAREYQERRDTLVPALQ"
     gene            complement(953..>1457)
                     /locus_tag="VLD58_02890"
     CDS             complement(953..>1457)
                     /locus_tag="VLD58_02890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53267.1"
                     /translation="FAGIRLNLQGREPAGTLAPGAEADRFIAELTRNLQKLVHDGSGH
                     PVVRQVHRTADLFRGACQDELPDLLVEWHTDPPLGTTAIGEGKNARIAVRSPGTGTVE
                     MLNFNCRTGEHRIEGMFVARGPGIAPGRLERVIPDLDLAPTFARYLGVDMPGVDGAPI
                     PELAGRP"
BASE COUNT          203 a          500 c          518 g          236 t
ORIGIN      
        1 ctggagcgcc ggcaccaggg tgtcgcggcg ctcctggtac tcacgcgcca atccggcgta
       61 gtagtcgcgg cccagcgtct cgatggcgac ggcgatgcct tcctggagcg gcgccggcgc
      121 gcccacggtg aggaagtcgt gcaccttccg gatggcgtcg gtcaccccgg cgggcgccac
      181 gatggtgccg atccgccacc cggtgatcga gaaggtcttg ctcgcgccgg atatcgtgat
      241 ggtccgttcc cgcattcccg gcagcgtcgc gatcgggagg tgctcgccgc tgtaccgaat
      301 gtgctcgtag atctcgtcgg tcaccgccca ggcgtcatgc ttccggcaga ggtcggcgat
      361 gccctcgagc tccgcgcggg tgagcacccg gcccgacgga ttgccggggg tgttcaccac
      421 gatggcgcgg gtccgattcg agaacgcgct cgcgagccgg tcgaggtcga gcggctgccc
      481 cggcatcagg gggaggaaga ccggcttcgc gtcgcagagg atggcgtcgg ggccgtagtt
      541 ctcgtagaac ggctcgaaga cgatcacttc gtcgccggga tcgatgagcg cgaggaagac
      601 ggacgccatg gcctcggtcg cgccgcaggt gacggtgagc tcggtctccg tgttgacctc
      661 catcccgtac cactcgaagt acttcttcgc gatggcgtcc cggagccgct tgctccccca
      721 ggtgatggca tactggttga tgtcggcgcg gatcgcggcg gccgccgcct ccttgaggac
      781 ttcgggcgcc gggaagttgg gaaacccctg cgccaggttg atggcgccgt gctcggcggc
      841 gagccgggtc atcccgcgga tgaccgactc ggtgaacgtg tgggtgcggc gggcggtggg
      901 catccagaag cttagcaacg cggcggggag tccgcctccc ctcccgcccg cgctacggcc
      961 ggccggcgag ctccggaatc ggcgcgccgt ccaccccggg catgtccacg ccgaggtacc
     1021 tggcgaacgt gggcgccagg tcgagatcgg gaatcacccg ctcgagccgc cccggcgcga
     1081 tgcccggtcc ccgggccacg aacatcccct cgatccggtg ctcgccggtc cggcagttga
     1141 aattgagcat ctccaccgtt ccggtcccgg gtgatcgcac cgcgatcctc gcgttctttc
     1201 cttccccgat ggccgtggtg cccagcggcg ggtcggtgtg ccattcgacc agcaggtcgg
     1261 ggagctcgtc ctgacaggca ccacgaaaga gatccgccgt acggtgcacc tggcgcacca
     1321 cgggatgccc cgaaccgtcg tggacgagct tctgcagatt ccgggtgagc tcggcgatga
     1381 agcgatccgc ctccgccccg ggcgccaggg tgccggccgg ctcccgcccc tgcaggttga
     1441 gccggatgcc cgcgaag
//
LOCUS       DATIFF010000193         4271 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_334998, whole genome shotgun sequence.
ACCESSION   DATIFF010000193 DATIFF010000000
VERSION     DATIFF010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4271
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_334998"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..274)
                     /locus_tag="VLD58_02895"
     CDS             complement(<1..274)
                     /locus_tag="VLD58_02895"
                     /inference="COORDINATES: protein motif:HMM:TIGR01409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HSB53268.1"
                     /translation="MYYPTSHPWTDEQDLGEHLESRGVSRRDFLAFCAQISAVLGLGE
                     LATPRVAAALEAVKRPTVIWLQLQECTGCVESVLRTAEPTIGDLVLD"
     gene            595..936
                     /locus_tag="VLD58_02900"
     CDS             595..936
                     /locus_tag="VLD58_02900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53269.1"
                     /translation="MHSVANAPVGDLAQLVAMEQDLEQRLARAREESHSLLTAATREA
                     EALAQTFEDTLATTRADRRRQLDLDRQEGEARILAEGRHRAEWYDQLPEAREIELAGY
                     VVDRLLGRPAP"
     gene            933..2834
                     /locus_tag="VLD58_02905"
     CDS             933..2834
                     /locus_tag="VLD58_02905"
                     /inference="COORDINATES: protein motif:HMM:NF013647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0033179 - proton-transporting V-type
                     ATPase, V0 domain [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0046961 - proton-transporting ATPase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="V-type ATPase 116kDa subunit family protein"
                     /protein_id="HSB53270.1"
                     /translation="MILAMAKVRVLGPRSSLPAVLRSLQELGVLHLTPPTYHPPMAPA
                     TLSTRQERERRHLLAAADDVDAALTALGPWLPPAGRAGPPPVANTTEFARWARLGWRT
                     RRSTDRLNTRDTLLNEERALILKYQGFFSAFRPLLENEARWRNTTVYHVLLKRAEQDV
                     IPRLRASLASLIGDSFELYSRELAGGETALLVVVSAGAGQRVERLLAEARVQEIPVPE
                     GYGGSSLAEAIPKMLARLGELPGEIEKVDKERRELARTKGPELRIARLAIAHRLQALN
                     ALPLSSVTAHAFVLEGWLPADARERLAQRLRTEVGESVVVTEVAREEWRSEEAPVVLR
                     NPRIFRPFEAVISLLPLPRYGSIDPTPFVAVFFPVFFGLMLGDIGYGLVLAIGGLVLH
                     RRSRPNTLLRSVSEIIGPCALFAIFAGVLFGEFFGDLGRRWFGLRPLAFDREEALIPF
                     LLLAVAIGGVHILLGMILGVVAARRHPKEALGKGAAVLSLIFIAAALLAAVDVLPRPF
                     FTPSVIGLLIAFPVLVVIEGVVAPIEFLSTLGNILSYARIMALGVASVMLAVVANRMV
                     GMLGSAVVGVMFALLFHLVNFAIGLFSPTIHALRLHYVEFFGKFYSPGGVRYEPFGSW
                     SRGAGLTRT"
     gene            2843..3064
                     /locus_tag="VLD58_02910"
     CDS             2843..3064
                     /locus_tag="VLD58_02910"
                     /inference="COORDINATES: protein motif:HMM:NF012365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53271.1"
                     /translation="MEAALTMLAAAAAIAVPALATAWAQSRIGPAIAASMAEKPELST
                     TAILMIAIPETMVILGFVVAALILFRGAA"
     gene            3078..3662
                     /locus_tag="VLD58_02915"
     CDS             3078..3662
                     /locus_tag="VLD58_02915"
                     /inference="COORDINATES: protein motif:HMM:NF014093.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0033178 - proton-transporting two-sector
                     ATPase complex, catalytic domain [Evidence IEA];
                     GO_function: GO:0046961 - proton-transporting ATPase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="V-type ATP synthase subunit E family protein"
                     /protein_id="HSB53272.1"
                     /translation="MALDQLLTVLSREAEAEAASVLEASRAEAQAIRDRAAAALAHRK
                     EEEERAWEVERQHAMAITLASSRQRAREAELLARDRMLTRVLTRARQQLPRVEDRDEF
                     RATLPVLLAHSLECLGDRPGAIRCSPALVAEVQRSIADRPAIELRPDPAIGTGFRLTS
                     SDGALLIDATLEQQIDQLAPRLRQEILARLEGAP"
     gene            3659..>4271
                     /locus_tag="VLD58_02920"
     CDS             3659..>4271
                     /locus_tag="VLD58_02920"
                     /inference="COORDINATES: protein motif:HMM:NF014094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="V-type ATPase subunit"
                     /protein_id="HSB53273.1"
                     /translation="MTVWDDLNARSRGLSRHLLGRSTLERLARAPDLGALADELRHLG
                     YPLPAEGKPDGAAIELAARRRVARQLAILARWAGVRRPALAILFEDEDRRSIVALLRG
                     AVQHAPPELRLSGLMPTSILPERALEELSRQPTPAAVASLLLAWDHPLSSALLPHTGD
                     PEPDLLHLEILLHRAFAERAHAAAKREGRHGPLVHYVERLIDLE"
BASE COUNT          609 a         1540 c         1434 g          688 t
ORIGIN      
        1 cgtccagcac caggtcgccg atcgtcggct cggccgtccg cagcacgctc tccacacatc
       61 ccgtgcattc ctggagctgg agccagatca ccgtcgggcg tttgacggcc tccagcgccg
      121 ccgccacgcg cggggtcgcc agctcaccca ggccaagaac agccgagatc tgggcgcaga
      181 aggccaggaa gtcccggcgc gacacccctc gcgactcgag gtgctcaccg agatcctgct
      241 catccgtcca aggatgtgaa gtcgggtaat acatgtgaaa tccgccttcc aggggttttg
      301 ggggaagcgc ggcggcgcca ggcggcgccg tctaagcctg cggcccaacc acggctagga
      361 acatttcatg tgcaacctgc ggagtcagag gtgaaggcgc gcttaggtct ccattaagag
      421 attcgtgaag gagcgtgaac gagttctcag gcactcgcta gcgagatctt gccggaatgg
      481 accctatact gcgccccaac tccgaattcg tccagcccca cgctctgacc tggacgatct
      541 tcggacctcg ctggcgacct ttgtaaggcg gacgacatgt cgaggaaaga cccggtgcat
      601 tcggtcgcga acgctccggt gggtgatctc gcccagctcg tcgcgatgga acaggacctc
      661 gagcagcgcc tggcgcgtgc ccgggaagag tcgcattccc tcctgaccgc tgccacccgc
      721 gaggccgaag cgctggccca gaccttcgag gacaccttgg ccaccacccg ggccgaccgt
      781 cgccgtcagc tcgatctgga ccggcaggag ggcgaagccc ggatcctggc ggagggccgc
      841 caccgggccg agtggtatga ccagctgccg gaggccaggg agattgagct ggcggggtat
      901 gtggtcgacc gcctgctggg aaggccggct ccgtgatcct cgccatggcc aaggtccggg
      961 tcctcggccc ccggagcagc ctccccgccg tcctccgttc ccttcaggaa ctgggggtgc
     1021 tccatctgac cccacccacg tatcacccgc cgatggcgcc ggcaaccctc tcgacgcgac
     1081 aggaacggga acgccggcac ctcctcgccg cggccgatga cgtcgatgcc gcccttacgg
     1141 ccctcgggcc gtggctgccc ccggcgggtc gggccggacc gccaccggtg gcgaatacca
     1201 ccgagttcgc gaggtgggcc cgattgggct ggcggacccg ccgcagtacc gaccggctca
     1261 acacccgtga caccctgctc aacgaagagc gagccctgat cctcaagtac cagggcttct
     1321 tctccgcctt ccgtcccctg ctggagaacg aggcccggtg gcgcaacacc accgtctacc
     1381 acgtcctcct caagcgtgcc gagcaggatg tgattccccg gttgcgcgcc agcctcgcga
     1441 gcctgatcgg cgattcgttc gagctgtaca gccgggagct ggccggggga gagaccgcgc
     1501 tgctggtggt ggtctctgcc ggcgcggggc agcgggtgga acggctgctg gccgaggcgc
     1561 gggtgcagga gatcccggtg ccggaaggct acggcgggtc gtccctcgcc gaggcgattc
     1621 cgaagatgct ggcgcggttg ggtgagctgc cgggcgaaat cgagaaggtc gacaaggaaa
     1681 ggcgggagct ggcccggacc aaaggacccg agctccggat cgcccgcctc gcgatcgctc
     1741 accggctcca ggccctcaac gccctgccgc tctccagtgt gacggcgcac gccttcgtgc
     1801 tcgaagggtg gctgccggcc gacgcccgcg aacggctggc gcagcggctc cgcaccgagg
     1861 tgggagagag cgtggtggta acggaggtgg cgagggagga gtggcgctcg gaggaagccc
     1921 cggtggtgct ccgcaatccc cggatcttcc ggcccttcga ggcggtgatc tcgctgctcc
     1981 cgctgccccg ctacggcagc atcgacccaa ccccgttcgt agcggtgttc ttcccggtct
     2041 tcttcggcct gatgctgggt gatatcggct acgggctggt gctggccatc ggcggcctgg
     2101 tgctccatcg ccgttcccgc cccaacaccc tgctccgttc ggtgtcggag atcatcggcc
     2161 cctgcgcgct gttcgcgatc ttcgcggggg tgctcttcgg cgaattcttc ggcgacctgg
     2221 gccgccgctg gttcggcctc cggccgctgg ccttcgaccg ggaagaggca ctgatcccgt
     2281 tcctcctcct cgccgtggcc atcggcgggg tgcacatcct gctcgggatg atcctgggcg
     2341 tggtggccgc gcggcgtcac cccaaggagg cgctcggcaa aggcgcggcg gtgctttcgc
     2401 tgatcttcat cgccgcggca ctcctcgccg cggtggacgt gctgccccgg ccgttcttca
     2461 cgccgtcggt gatcggcctc ctgatcgcct tcccggtgct ggtggtcatc gaaggagtgg
     2521 ttgccccgat cgagtttctc tcgaccctgg gcaacatcct gtcctacgcc cgtatcatgg
     2581 cgctgggtgt cgcttcggtc atgctggccg tggtcgccaa ccgcatggtc ggcatgctgg
     2641 gcagtgcggt ggtgggagtg atgttcgccc tgctctttca cctggtgaac ttcgccatcg
     2701 ggctcttcag cccgacgatt cacgccctcc gcctgcacta tgtcgagttc ttcggaaaat
     2761 tctacagccc cggtggcgtg cgctacgagc cgttcggctc gtggagccgt ggcgccggac
     2821 tcacccgcac ataggagaga gcatggaagc cgccctcacg atgctcgcgg ccgcggccgc
     2881 catcgccgtc cccgcgctgg ccaccgcctg ggcccagtcc cgcatcggcc cggccatcgc
     2941 tgccagcatg gcggagaagc cggaactcag caccacggcg atcctgatga tcgcgattcc
     3001 cgagacgatg gtgattctcg ggttcgtggt cgcggccctg attctcttcc gcggcgccgc
     3061 ctgagcgggg ccggaccatg gcactcgacc agctgctcac cgtcctctcc cgcgaggccg
     3121 aggccgaagc ggcctcggtg ctcgaggctt cccgggccga agcccaggcg atccgcgacc
     3181 gggctgccgc ggcgctggcc caccggaagg aggaagaaga acgggcctgg gaggtcgagc
     3241 ggcagcacgc catggcgatc accctcgcca gctcccggca gcgggcccgt gaagccgaac
     3301 tcctggcgcg cgaccgcatg ctgacccgcg tgctgacccg agcccggcag caactgcccc
     3361 gggtcgagga ccgggacgag ttccgcgcca ccctgccggt tcttctggcg cactcactcg
     3421 agtgccttgg cgaccgcccc ggggccatcc gctgctcccc ggcgctggtc gccgaggtcc
     3481 aacggagcat cgccgatcgc ccggcgatcg agctccggcc cgatcccgcc atcggcaccg
     3541 gcttccggct caccagcagt gatggcgcgc tgctcatcga tgcgaccctg gaacagcaga
     3601 tcgaccagct cgcgccgcgt ctccgccagg agattctggc gcggctcgag ggggcgccat
     3661 gaccgtctgg gatgatctca acgcccggag ccgcgggctc tcccgtcatc tcctcgggcg
     3721 cagcacgctc gagcgcctgg cccgcgcgcc ggacctcggc gccctcgccg acgaactgcg
     3781 gcatctgggc tacccgctcc cggcggaggg gaagcccgat ggcgcggcga tcgagctcgc
     3841 cgcccgccgc cgggtggcgc gccagctcgc gatcctggcc cgctgggccg gggtccggcg
     3901 gccggcgctg gccatcctct tcgaggacga ggaccggcgg agtatcgtgg cgctgctgcg
     3961 cggcgcggtg cagcacgccc cgccggagct ccggctctcc gggctcatgc cgacgtcgat
     4021 cctgccggag cgggccctcg aggagttgtc gcgccaaccg acgcccgccg ccgtggcctc
     4081 cctcctcctc gcgtgggatc acccgctctc cagcgcgctg ctgccccata cgggcgatcc
     4141 cgagcccgac ctgcttcatc tcgagattct cctccaccgt gcctttgccg agcgggccca
     4201 cgcggcggcg aaacgggaag gccgccacgg ccccctggtg cattacgtcg agcggctgat
     4261 cgatctcgag a
//
LOCUS       DATIFF010000194         2393 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_181696, whole genome shotgun sequence.
ACCESSION   DATIFF010000194 DATIFF010000000
VERSION     DATIFF010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2393
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181696"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..275
                     /gene="rimI"
                     /locus_tag="VLD58_02925"
     CDS             <1..275
                     /gene="rimI"
                     /locus_tag="VLD58_02925"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: protein motif:HMM:TIGR01575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HSB53274.1"
                     /translation="DVAATGEVLNLAVAPEHRRRGIGGALLEAGLKAFRRRKVDEVFL
                     EVRESNHSAQALYLARGFRPVGQRSAYYRNPKEDALVLRLEMAQRA"
     gene            380..856
                     /locus_tag="VLD58_02930"
     CDS             380..856
                     /locus_tag="VLD58_02930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HSB53275.1"
                     /translation="MSRSLNKAILIGNLGADPEVRSTSNGSRVATLSVATSRQWKNQS
                     GEKQEKTEWHRVVLWNNKGSNLADIAEKYCKKGDKVYVEGSIEYRSWQDREGQTRYTT
                     EITARELILLSGRGDGAEAFSAPSKVAAASASAPKGKESFEDFPEALDAEDDDLPF"
     gene            1165..2358
                     /locus_tag="VLD58_02935"
     CDS             1165..2358
                     /locus_tag="VLD58_02935"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HSB53276.1"
                     /translation="MSRTLHWKWVGLLALSLAPSLVLAQAAAPQSHTVRKGDTLWDLA
                     KQYRGDPFLWPDIYRMNTSVVEDPHWIYPGEVLQLAASADTTPAVPTTDTPAPAPVAD
                     AAVPASSDSVAAVPATYDDGGAPQRTLAQLTAATASDSDSDQGLFGPRRTHVLEETLK
                     AYAHQPYRPLRRSEFYSSGFLTENQSLPFGKVLGPTLPQQIRAMSSHANAMPYSQIVV
                     EAPKGGTYQVGDTLLLAQLGPELGGYGDIVIPTGLARVIDTVQGRYVADLVATYGPIR
                     NGQRTLPAEKFSPAAEAHAVPVSEGVHATFLGGNGRQDLKAPQMIVFLDKGRADGVAP
                     GDMFELRRRAQRLPDGTQLINDVMATLQVVHVREHTATARLLNVLSPDIAPGTEARQI
                     AKLPS"
BASE COUNT          391 a          835 c          807 g          360 t
ORIGIN      
        1 gggacgtggc ggctacgggt gaggtgttga acctggccgt cgccccggag caccgccggc
       61 gcgggatcgg gggcgcgctg ctggaagccg gcctgaaggc gtttcgccgc cgcaaggtgg
      121 acgaagtgtt cctggaggtt cgggagtcga accactcggc gcaggcgctc taccttgctc
      181 gcgggttccg gccggtcgga cagcgctcgg cctactaccg caacccgaag gaggacgcgc
      241 tcgtgctccg cctggagatg gcgcagcggg cgtgattccg gtggcggcgg cgtaagtttg
      301 gttgaccgaa caacttgcag gctctacatt ttactcgggt ccacaccggt ggcccaacgc
      361 gcgaaccctg gaggtgcatg tgagccggag tctgaacaaa gccatcctga tcgggaacct
      421 cggcgcggac ccggaggtcc gcagcacctc gaacggctcc cgcgtggcca ccttgtcggt
      481 cgctaccagc cggcagtgga agaaccagag tggtgaaaag caggaaaaga ccgagtggca
      541 ccgcgtggtg ctctggaaca acaaggggtc caatctcgcg gacatcgccg agaagtactg
      601 caagaagggc gacaaggtct acgtggaggg cagcatcgag taccgctcct ggcaggaccg
      661 cgaggggcag acgcggtaca ccaccgagat cacggcccgc gagctgattc tcctctccgg
      721 ccggggcgat ggcgctgagg ccttcagcgc gccgagcaag gtcgcggccg cgtcggcttc
      781 ggcacccaag ggcaaggagt ctttcgagga tttcccggag gcgctcgacg ccgaggacga
      841 cgatctgccg ttctgatcgt gccgtggatc cctgtgacgg gccggcggaa tcctcgggtt
      901 ccgccggttt tctcttgccc cgggcgcacc ggagcgccgg cccgtcccgg cgagggatat
      961 ctcccgaccc tccgccaatc gccagagggc cgggcgtcgc cgagggccgt gtcccaagag
     1021 gttaatgacc tgtactgaaa tgacttagcc attgcggacc ggccccaggc ccactggcgt
     1081 cgaacttgca aatcctgcct ctgaaccgct ccgcggtcgc tctaccctcg ccatctccga
     1141 caccaacgtc gccgggagac cccgatgtcc cgtacgctcc actggaagtg ggtgggcctg
     1201 ctcgccctga gtctggcgcc gagcttggtg ctcgcgcagg cggccgcgcc ccagtcccat
     1261 acggtccgca agggcgacac gctgtgggat ctggccaagc agtaccgcgg cgatccgttc
     1321 ctctggcccg acatctaccg catgaacacg agcgtggtcg aggacccgca ctggatctac
     1381 ccgggtgagg tgctccagct cgcggccagc gcggacacca cgccggccgt tccgaccacc
     1441 gacacgccgg ctccggcgcc ggtggccgac gccgccgtgc ccgcgtcgag cgactccgtc
     1501 gccgccgtgc ccgccaccta cgatgatggc ggcgccccgc agcggaccct cgcgcagctc
     1561 acggccgcca cggccagcga tagcgacagc gatcaggggc tcttcggacc ccgccgcacc
     1621 cacgtgctgg aggagacgct caaggcctac gcgcaccagc cgtaccgccc gcttcgccgg
     1681 agcgagttct actcatccgg ctttctcacg gagaatcagt cgcttccctt cggcaaggtg
     1741 ctcggcccga cgctgccgca gcaaattcgc gccatgagct cgcatgcgaa cgccatgccc
     1801 tactcgcaga tcgtggtcga ggccccgaaa ggcggcacgt atcaggtggg cgacaccctc
     1861 ctcctggccc agttgggccc cgagctgggg ggctacgggg atatcgtgat cccgaccggc
     1921 cttgcgcggg tgatcgatac ggtgcagggc cgctacgtcg cggacctcgt cgcgacctac
     1981 ggaccgatcc ggaacgggca gcgcacgctc cccgcggaga agttcagtcc cgccgccgaa
     2041 gcccatgccg ttccggtgtc cgagggcgtg cacgccacct tcctcggcgg caacgggcgg
     2101 caggatctca aggcgccgca gatgatcgtc ttcctcgaca agggccgggc cgacggcgtc
     2161 gcgccgggcg acatgttcga gctgcgccgg cgggcgcagc ggctgccgga cggaactcag
     2221 ctgatcaacg acgtgatggc cactttgcag gtcgtccacg tccgcgagca caccgcaacc
     2281 gctcgccttc tcaacgtgct ctccccggac atcgcgcccg ggacggaggc gcgacagatc
     2341 gccaagctcc cgtcctgacc tccgggaggg tggcgtgacg cggcgtcggg tgg
//
LOCUS       DATIFF010000195         1089 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1719721, whole genome shotgun sequence.
ACCESSION   DATIFF010000195 DATIFF010000000
VERSION     DATIFF010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1719721"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            668..>1089
                     /locus_tag="VLD58_02940"
     CDS             668..>1089
                     /locus_tag="VLD58_02940"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB53277.1"
                     /translation="MTDAVQRLGSALADRYRIERELGQGGMATVYLAHDLRHDRKVAI
                     KVLRPDLAAVIGAERFLREIKTIANLQHPHILGLIDSGEIGGTAYYVMPFVDGESLRD
                     RLRREKQLPVADAVRIATEVASALDYAHRHGVIHRDIKP"
BASE COUNT          165 a          385 c          371 g          168 t
ORIGIN      
        1 gcgagttcgc ggcgatgctg cacttggtct gcgcgccgcc ctgcgactcg caccggacgg
       61 tgctggtctg ggccgcggcg cggggcggtg ccccgacgag cacgagcgcg agcaccgacc
      121 acaccagggc gaccgtagtg cgtgactgca tagggggcct cctcgccggg aagcgtggcg
      181 agacgaaagt tcgattgtcg gtgcttcggg ctggctgctt cagcaaggta gttccaccgg
      241 gaccgtgcgg cggtgatcca tccctctccg cgctcctcag ccgacgcccg ccaccaagtc
      301 gctggaagcg ggggttgttc cggagcggcc cgaacgtcgg atcgatcttg agccactcgg
      361 atgagagata gtacggcccc ttgagcaggg gccagtccgt cgagcgggcc atgctggcct
      421 gtgatgtggt gggtgggtga cgccgggccc tacaatatct atgcggcggc gagtgagggg
      481 ggaagtggcg ctacgggggg tggctggcag gaggcccgcc accgggccgc atggcccggc
      541 ccgtttcgat cggtcaccct gaactggccc ctccgccccg cgacagcgat attcagccgt
      601 ttccgatccg cacgcctcga ccgccatccg tcccacgagt cttcgcatga ttgaccgcta
      661 gccccgcatg accgacgccg ttcagcgcct cggctcggcg cttgccgacc gctaccgcat
      721 cgagcgggag ctcgggcagg gtgggatggc taccgtctac ctcgcgcacg acctccgcca
      781 cgatcgcaag gtcgccatca aggtgctgcg gcccgacctc gcggccgtca tcggcgccga
      841 gcggttcctc cgcgagatca agacgatcgc caacctgcag cacccgcaca tcctcggcct
      901 catcgactcc ggcgagatcg gcggcaccgc gtactacgtc atgccgttcg tcgacgggga
      961 atcgctccgc gaccggctcc ggcgagagaa gcagctgccg gtcgccgacg ccgtccggat
     1021 cgccaccgag gtcgcctccg cgctggacta cgcgcaccgc cacggggtga tccaccggga
     1081 catcaagcc
//
LOCUS       DATIFF010000196         3121 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1565856, whole genome shotgun sequence.
ACCESSION   DATIFF010000196 DATIFF010000000
VERSION     DATIFF010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3121
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1565856"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1223)
                     /locus_tag="VLD58_02945"
     CDS             complement(<1..1223)
                     /locus_tag="VLD58_02945"
                     /inference="COORDINATES: protein motif:HMM:NF014589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase N-terminal
                     domain-containing protein"
                     /protein_id="HSB53278.1"
                     /translation="MTTHTLGISAYYHDSAACLLRDGEIVAAAQEERFTRKKGDAAFP
                     HQAVAYCLRAGGIKVDDLTHVGFYDKPLLKFERILETYLGIAPAGFKSFLMAGPLWVK
                     EKLYLDRQLHDELGYTGEILYAEHHESHAASAFFPSPFEKAAILTMDGVGEWATASIG
                     VGEGSDIRLESELHWPDSLGLLYSAFTYYLGFKVNSGEYKVMGLAPYGEPKYVKQILD
                     EVIDLKEDGSLTLNQKYFNYLSGLTMTNGAFDRLFGAPPRVPETHLVQRDLDLARSVQ
                     EVCEEAMLRMARTAHRQTGLDRLCLAGGVALNCVGNGRILREGPFKQLWIQPATGDAG
                     GALGVAQLIWHRYLQQPRRVTPGKDSMKGAYLGPSYSPDEIEGFLKKSGAVYERLEQG
                     ALNRRVAGLLADEKIL"
     gene            complement(1438..1641)
                     /locus_tag="VLD58_02950"
     CDS             complement(1438..1641)
                     /locus_tag="VLD58_02950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53279.1"
                     /translation="MATRLDKTLKRELEVEGKLYTVTISPEGVKIVPKGGRKGPEITW
                     QTLLSGDAELSRDLNVSVDAYSS"
     gene            complement(1898..>3121)
                     /locus_tag="VLD58_02955"
     CDS             complement(1898..>3121)
                     /locus_tag="VLD58_02955"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB53280.1"
                     /translation="FTEGRLIASHIPGSRFVPLESRNHLLLESEAAWPRFLQTVREFL
                     GVPVDEPVVRLPLTAARRRRVEELFDQVADLGAADRERALDQACAGDPELRREVESLL
                     AGAEDPALTADLSRMVSRVMRLREEGPARSGEVVSAYQIVEKLGSGGMGVVFRAVDRR
                     LNRQVALKFLPESVGADAQLRQRFLQEAKVAASLDHTNICTIYGVEQAGDGRLFLVMP
                     YYEGEILQSRIRRGPLPVSEALDYARQIATGLAHAHAAGVVHRDIKPANVAITLEGRV
                     KILDFGIAKIADASLTRTGMVLGTLAYMSPEQAAGEKQVDHRTDLWALGVVLYEMLTG
                     RRPFAQDTVAALFYAVQSMEPPAIAELRPEVPEPLTGIIGRLLQKKRDLRYPDMAAVL
                     AALGEIHTLSGAARL"
BASE COUNT          467 a         1060 c         1098 g          496 t
ORIGIN      
        1 aggatcttct cgtccgccag gaggcccgcc acgcgccggt tgagcgcccc ctgctcgagg
       61 cgctcgtaca ccgcgccgga cttcttgagg aagccctcga tctcatcggg ggagtaggag
      121 gggccgaggt acgcgccctt catcgaatcc ttgccaggcg ttacccggcg cggctgctgc
      181 aggtagcggt gccagatgag ctgggccacg ccgagcgctc cgccggcgtc gccggtagcg
      241 ggttggatcc acagctgctt gaacggccct tcccggagga tgcgaccgtt gcccacgcag
      301 ttgagcgcca cgccgcccgc caggcagagg cggtcgagcc cggtctgccg gtgcgcggtg
      361 cgggccatcc gcagcatcgc ctcttcgcag acctcctgga ccgagcgggc gaggtcgagg
      421 tcccgctgca ccaggtgggt ctcggggacc cggggcggcg cgccgaacag gcggtcgaag
      481 gccccgttgg tcatggtgag accgctgagg tagttgaagt acttctggtt gagggtgagg
      541 gacccgtctt ccttgagatc gatcacctcg tccaggatct gcttgacgta cttgggctcg
      601 ccgtagggcg cgagacccat gaccttgtac tccccggagt tgaccttgaa acccaggtaa
      661 taggtgaagg ccgagtacag gagcccgagc gaatcgggcc agtgcagctc actctcgagc
      721 cggatgtcgc tcccctcgcc caccccgatc gacgcggtgg cccactcgcc gaccccgtcc
      781 atggtcagga tagcggcctt ctcgaacggg gagggaaaga acgcgctcgc cgcgtgggac
      841 tcgtggtgct cggcatacag gatctcgccg gtgtagccca gctcgtcgtg cagctgacgg
      901 tcgagataca gcttttcctt gacccagagc ggcccggcca tgaggaagga cttgaagccg
      961 gccggcgcga tccccaggta ggtctccagg atccgctcga acttgagcag cggcttgtcg
     1021 tagaacccga cgtgggtcag gtcgtcgacc ttgatgccgc cggctctgag gcagtacgcc
     1081 acagcctgat gcgggaacgc agcatccccc ttcttccggg tgaagcgctc ctcctgggcc
     1141 gcggccacga tctccccgtc ccggagcagg caggcggcgc tatcgtggta gtaagctgag
     1201 atgccaagtg tgtgcgtagt catgccttac ccctctgccg acggacccgg cggcaagggg
     1261 cgtcctagag tgtgagtggg tgcgacgtat ggtcgagatt tcgtggccgg gtccaggcac
     1321 aggcaggttt cagaccggaa gccaggcgcc cggaagatag gcggacgggc ggtgcggtgc
     1381 cgggtcggag cctggcggcg tggatggtcc gccgccaggc ccggagtccg gcggagttca
     1441 gctgctgtag gcgtcgaccg agacgttgag gtcccggctg agctcggcgt cgccgctcag
     1501 cagggtctgc caggtgatct cggggccttt gcggccgccc ttggggacga tcttcacccc
     1561 ctccggcgag atcgtcacgg tgtacagctt cccctccacc tccagctccc gcttgagggt
     1621 cttgtccaga cgtgtggcca tcggtgttcc tccgtatgcg tggccggggc acgacccggc
     1681 gcgtaagtcc cgcgaacgca cccggagtgg gtgtccgggc ctgcccgtag gatggggcca
     1741 tgtcgcccgt tcttccaccc cccgggaggg cgggagccga gtccctgccc cgcaaggtcc
     1801 ctcgggggga ccctgccagg agcggcgtaa gccgctcagg ctcatgatgt tgggcctgcc
     1861 gtcactggca ctgaccataa ggtcgcgtcg ctgccgccta gagccgggcc gcgccggaga
     1921 gggtgtggat ctcgcccagg gcggcgagta ccgcggccat gtcggggtaa cggaggtcgc
     1981 gcttcttctg gagcagtcgg ccgatgatcc cggtcagggg ctcgggcacc tcgggccgca
     2041 actcggcgat cgccggcggc tccatgctct ggaccgcgta gaacagggcg gcgacggtat
     2101 cctgcgcgaa ggggcgccgg ccggtgagca tctcgtacag caccacgccg agggcccaga
     2161 gatcggtccg gtggtccacc tgcttctcgc ccgccgcctg ctcggggctc atgtaggcaa
     2221 gggtgccgag caccatcccg gtccgggtga ggctcgcgtc ggcgatcttg gcaatcccga
     2281 aatcgaggat cttgacccgg ccctcgagcg tgatggcgac gttggcgggc ttgatgtccc
     2341 ggtgcaccac cccggcagca tgcgcatggg ccaggccggt cgcgatctgg cgggcgtaat
     2401 cgagggcctc cgataccggg agcgggccgc ggcggatccg gctctggagg atctcgccct
     2461 cgtagtaggg catcaccagg aacagccgcc cgtcgccggc ctgctcgacc ccgtagatgg
     2521 tgcagatgtt ggtatggtcg agcgaggcgg caaccttcgc ctcctggaga aaccgctgcc
     2581 ggagctgggc gtcggcgccc acgctctcgg ggaggaactt gagcgccacc tgccggttga
     2641 gccggcgatc caccgcccgg aagaccacgc ccatcccccc gctcccgagc ttctccacga
     2701 tctggtaggc cgacacgact tcccccgacc gggccggccc ctcttcccgc agccgcatga
     2761 cccgcgacac catccgggag agatcggcgg tcagcgccgg gtcttcggcc ccggcgagca
     2821 gcgactccac ctcccgccgc agctcggggt cgccggcgca ggcctggtcc agcgctcgct
     2881 cgcgatccgc ggccccgagg tcggccacct ggtcgaacaa ctcctccacc cggcggcggc
     2941 gcgcggcggt gagcggcagc cgcaccaccg gctcgtcgac cggcacgccg agaaactcgc
     3001 ggaccgtctg gagaaagcgg ggccaggcgg cctcggactc caggaggagg tggttgcggc
     3061 tctccagcgg cacgaaccgc gaacccggaa tgtgcgaggc gatcagccgg ccctcggtga
     3121 a
//
LOCUS       DATIFF010000197         3077 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_489239, whole genome shotgun sequence.
ACCESSION   DATIFF010000197 DATIFF010000000
VERSION     DATIFF010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3077
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_489239"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            47..2713
                     /locus_tag="VLD58_02960"
     CDS             47..2713
                     /locus_tag="VLD58_02960"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSB53281.1"
                     /translation="MPEPRTTEQQTWLLNLALDRVSEGIFLMEDGSPRFTYVNQSAAD
                     YLGYSQAELTGGMTIFDIDPGWTPERWEAYLPEIRVKHRMTFVATHRTRDGRLIPVEI
                     TSSWFEYEGRAYNMALTRDISERQAAEQALRTSEAAYRSLVDNTPDHIVRWDRSLNRV
                     LVNQGFARWMGKPAADLIGGRFGVGHQPGGAKALNRVEEAILRVFASEAAELLVLPMV
                     GIEGERTIQLRLIPERDANGAVTTVLGIGRDISEIKETERQLRTLTEHSPDVIIRFDR
                     EGRYLYANETLARLTGVPVAEHLGQEFGSVSGPGSPEVYAGLRRKVAEVFATRAPIEM
                     EIALPVADRQHQFNVRLVPEEDDRGNTVSVLAVVRDITAKKLAEAALRASEQRFRQVT
                     ENVDEVFWLTDVAKTEILYLSPAYERVYGQPIAAVMANPRAWLERVAPEDRARVEASL
                     TRQAEGGYDIEYRITRADGTRWIHERAFPITDETGKVYRIAGVAEDMTVRRQLEDQLR
                     QAVKMEAVGRLAGGIAHDFNNMLAVIQMQSTLLEEEAELAPVVREGLREILAATERAT
                     NLTRQLLTFSRRQVYQPVALDISETVGNMTRMLRRLLGEDIQLETRFAPVLPPILADP
                     GMMEQVLMNLAINARDAMPGGGRLTIALEPTARRREPALEPSDTTSNGRYICLTVSDT
                     GCGIPPEALPRIFEPFFTTKEVGRGTGLGLATVFGIVEQHHGWIEVESTVGAGTTFRV
                     FLPAAHSEGPSVGAASGGAEVGPRGTETILLVEDEAAVRSSSRQALARLGYEVLEADS
                     AAQAVAIWEKNAARIALLVTDLVMPGGMTGRQLATTLLGRQPGLRVLYVTGYSPDLVE
                     RTLGAGDRVPILQKPFGAAALATAVRRTLDQR"
BASE COUNT          515 a         1072 c         1049 g          441 t
ORIGIN      
        1 agcagggagc gcttactatg gaggcggcct ctccgcggga gccagcatgc ctgagcctcg
       61 caccaccgag cagcagacct ggttgctcaa cctcgccctc gaccgggtga gcgaggggat
      121 cttcctcatg gaggatggct ccccgcgctt cacctatgtc aatcagagcg ccgcggacta
      181 tctcgggtac tcccaggccg agctcaccgg tgggatgacc atcttcgata tcgacccggg
      241 atggaccccg gagcgctggg aggcctacct cccagagatc cgggtcaagc accggatgac
      301 cttcgtcgcc acccaccgga cccgggatgg ccgcctcatc ccggtggaga tcaccagcag
      361 ctggttcgaa tacgagggcc gggcctacaa catggccctc acccgcgaca tctccgagcg
      421 ccaggccgcc gagcaggccc tgcggaccag tgaggccgcc taccggagcc tggtggacaa
      481 cacccccgac catatcgtcc gctgggaccg ctcgctcaat cgggtgctgg tgaaccaggg
      541 attcgcccgc tggatgggca agccggccgc ggatctgatc ggaggccgct tcggggtcgg
      601 acaccagcct gggggcgcca aagcgctcaa ccgggtcgag gaagcgatcc tgcgggtctt
      661 cgcgagcgag gccgccgaac tgctggtgct ccctatggtc ggcatcgagg gcgagcgcac
      721 catccagctc cgcctgatcc ccgagcggga tgcgaacggc gccgttacca ccgtgctcgg
      781 catcggtcgg gacatctccg agatcaagga gacggaacgc cagctgcgga cgctgaccga
      841 gcactccccc gacgtgatca tccggttcga ccgggagggc cgctacctct acgccaacga
      901 gacgctcgcc cggctgaccg gcgtgccggt ggccgagcat ctcggccagg agttcgggag
      961 tgtcagcggt cccggctcgc ccgaggtcta tgccgggctc cgccgcaagg tggccgaggt
     1021 gttcgccact cgcgcgccga tcgagatgga gatcgccctg ccggttgccg accgccagca
     1081 ccagttcaac gtccgcctcg tgcccgagga agacgaccgg ggaaacaccg tctctgttct
     1141 ggctgtggta cgggacatca ccgcaaagaa actggccgag gcggcgctcc gcgccagcga
     1201 gcaacgcttc cggcaggtga cggaaaatgt cgacgaggtc ttctggctga ccgacgtcgc
     1261 gaagaccgag atcctctatc tgagtcccgc ctacgagcgg gtctacgggc agccgatcgc
     1321 cgcggtgatg gcgaacccgc gcgcctggct cgagcgggtg gccccggagg accgggcacg
     1381 ggtggaagcg tcgctgacgc ggcaggcgga aggcggctat gacatcgagt atcgcatcac
     1441 ccgggcggac ggcacccggt ggatccacga gcgggccttc cccatcaccg acgaaaccgg
     1501 gaaggtctac cgcatcgccg gcgtggcgga ggacatgacg gttcgccgcc agctggagga
     1561 ccagctgcgg caggcggtca agatggaggc ggtgggccgc ctcgccggcg gcatcgcgca
     1621 cgacttcaac aacatgctcg ccgtcatcca gatgcagtcg acgctgctgg aggaggaggc
     1681 cgagctcgcc cccgttgtca gggaaggact ccgagagatc ctcgccgcca ccgaacgcgc
     1741 caccaacctc acgcgccagc tcctcacctt cagccgccgc caggtgtacc agccggtcgc
     1801 gctcgatatc agcgagaccg tgggcaacat gacccggatg ctccggcgtc tcctgggcga
     1861 ggacatccag ctcgagaccc gcttcgctcc ggtgctgccg ccgatcctcg ccgacccggg
     1921 aatgatggag caggtcctca tgaacctcgc catcaacgcc cgcgacgcga tgcccggcgg
     1981 tggccgcctc accatcgcgc tcgagccgac tgcccggcgg cgcgaaccgg ccctggagcc
     2041 gagcgacacc accagcaacg gccgctacat ctgcctcacc gtgtccgaca ccgggtgcgg
     2101 catcccgccc gaggcgctgc cccgcatctt cgagccgttc ttcacgacga aggaagtcgg
     2161 tcgcggcacc ggactcggtc tcgccacggt cttcggcatc gtggagcagc accacggctg
     2221 gatcgaggtg gagagcacgg tcggcgccgg caccaccttc agggttttcc tcccggcggc
     2281 acactccgaa gggccgtcag tcggcgcggc gagcggtggg gccgaggtgg gcccgcgcgg
     2341 gaccgagacc atcctgctgg tggaagacga ggcagcggtc cggagcagca gccgtcaggc
     2401 gctggcccgg ctgggctacg aggtactgga ggcggactcg gccgcgcagg cagtcgcgat
     2461 ctgggagaag aacgcggccc gcatcgcgct cctggtgacc gacctcgtca tgccgggcgg
     2521 catgaccgga cgccagctcg ccacgaccct gctcggccgg cagccgggac tgcgggttct
     2581 gtatgtcacg gggtacagcc ccgacctggt ggaacggacc ttaggggccg gggaccgcgt
     2641 gccgatcctc cagaagccgt tcggtgcggc ggcgctggct actgcggtcc ggcggacgct
     2701 ggaccagagg taaggagggg aagagccccc cggctggacc tcaaggaagt atcaagattg
     2761 ccgcgccgcg gcactcgcat ctcttgtacc agcgcgctgc ctcttgccgc cggggcggcg
     2821 ttagttagct tgttgcccac gccgcgccct ccgcggcgtc atcggggcgc cgaaccgccg
     2881 cccaccagga tgactcctcc gtcgctggac ccctagacca caaactcggc tcttgccggc
     2941 ctgatgtcct cgctggctac cgcatgaccc gtgcggccgc gcaccgaccg gtacgcaggc
     3001 tgaatcgcgc ggggggcagt acacatccgt ggagtgtcta tggacctgga actgacgcgg
     3061 tggatcgtgg tgggggg
//
LOCUS       DATIFF010000198         1316 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_181936, whole genome shotgun sequence.
ACCESSION   DATIFF010000198 DATIFF010000000
VERSION     DATIFF010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1316
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181936"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..857
                     /locus_tag="VLD58_02965"
     CDS             <1..857
                     /locus_tag="VLD58_02965"
                     /inference="COORDINATES: protein motif:HMM:NF014273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HSB53282.1"
                     /translation="LNAEVEADGGTVIGAYREPLGSQWQLLAALPIEKVEPTPYQRDL
                     SETHVKRLSEAIEKLGRFMDPLIAVRTAEGRYWTPNGNHRLAAMRTLGARSIVALVVP
                     EPEVAHRILVLNTEKAHNVRERALEVIRLAEALAELDDRSEKSYETEFEEPSLLTLGA
                     CYQHNGRFAGGAYHPVLKRVESFQTARLSKALELRRERADRLMELDEAVGAAVAGLKA
                     RGFESPYLKAFVLARINPLRFTLKRGQKADFDETIGKMLGSARKFDASKIRQDQIART
                     GGAPDSAE"
     gene            complement(871..>1316)
                     /locus_tag="VLD58_02970"
     CDS             complement(871..>1316)
                     /locus_tag="VLD58_02970"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSB53283.1"
                     /translation="LPLLAGVVLLVGCAHSQPETVAAPEAAAIRQTLLHAMEGSAAAW
                     NRADLDGHVALYTDSAAMMTRNGPLVGKQRIRGILERGFWKEGRPAQELAFSDLAVTP
                     LGPSHAMVTGKCILTGGGQPEFTCRFTTIWEKRPEGWRIIHDHSS"
BASE COUNT          219 a          440 c          460 g          197 t
ORIGIN      
        1 ggctcaatgc cgaggtggag gccgacgggg gcaccgtgat cggggcctac cgcgagccgc
       61 tgggctcgca gtggcagctg ctcgcggctc tgccgatcga gaaggtcgag cccacaccct
      121 accagcgcga cctctccgag acccacgtga agcggctctc cgaggcgatc gaaaagctgg
      181 ggcggttcat ggaccccttg atcgcggtcc gcaccgcgga aggtcgctac tggacgccca
      241 acggcaacca ccggctggcg gcgatgcgga ccctcggcgc ccggagcatc gtggccctgg
      301 tggtgccgga accggaagtg gcgcaccgga tcctggtgct caacaccgag aaggcccaca
      361 acgtgcgcga gcgggccctg gaggtgatcc ggctggccga ggcgctggcc gagctggatg
      421 accggtcgga gaagagctac gagaccgagt tcgaggagcc atcattgctg acgctgggtg
      481 cctgctacca gcacaacgga cgcttcgccg gcggggccta ccatccggtg ctcaagcggg
      541 tcgagagctt ccagactgcg cggctgtcca aggcgctcga gcttcggcgg gagcgggccg
      601 accggttgat ggagctggac gaggcggtcg gtgcggcggt ggccgggctc aaggcgcgcg
      661 gattcgagag tccctacctc aaggcctttg tgctggcccg gatcaacccg ctgcgcttca
      721 ccctcaagcg gggccagaag gccgatttcg atgagaccat cggcaagatg ctgggctcgg
      781 cccggaagtt cgacgcctcc aagatccgcc aggaccagat cgcccgcacc gggggcgcgc
      841 ccgacagcgc cgaatgacgg gcggagtagc tcagctcgag tggtcgtgga taatgcgcca
      901 gccctcgggc cgcttctccc agatggtggt gaaacggcag gtgaattcgg gctggccgcc
      961 accggtgaga atgcacttgc cggtcaccat ggcgtggctt ggtcccaggg gcgtcactgc
     1021 caggtcggag aacgccagtt cctgtgccgg cctgccctcc ttccagaagc cccgctccag
     1081 aattcctcga atccgctgct ttcccaccag cggtccgttc ctggtcatca tcgccgccga
     1141 atcggtgtag agcgccacgt gaccgtcgag atcggcccgg ttccacgctg cggccgatcc
     1201 ctccatggcg tggagcagcg tctgcctgat cgcggccgct tccggggcgg ccaccgtctc
     1261 cggctgggaa tgggcacagc cgaccagcag aaccacgccg gccagcaacg gcaggg
//
LOCUS       DATIFF010000199         6458 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1412712, whole genome shotgun sequence.
ACCESSION   DATIFF010000199 DATIFF010000000
VERSION     DATIFF010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6458
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1412712"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1083)
                     /locus_tag="VLD58_02975"
     CDS             complement(<1..1083)
                     /locus_tag="VLD58_02975"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HSB53284.1"
                     /translation="MSSRRPVLVAGLRTPFAKSGTVFRNVTAVELARRVTQELLERTN
                     LDGKVVDEVAFGQVIASVLAPNVAREVSLLPQLPREIPAFSLNRACASAGSAITYAAD
                     QITLGHADVILAGGVESLSDIPILHSKKMSQLLVEASKAKSLTQRLGIFSRIRPRDLV
                     PVSPAIAEPSTGESMGQSAEKMAKENGITREAQDRVAYMSHQRAAAATASGRFASEVA
                     PWFGGRGMDEVVTTDNLIRGDTSMEALAQLKPVFDRRYGSVTAGNSSPLTDGAAVTLI
                     MEESKARALGYTPLVTVRSYALAAVDPGWQLLMGPAFAVPKALDRAGISWKDLGLVEI
                     HEAFASQVLSNAQAWASKEWARKLGRA"
     gene            complement(1163..1726)
                     /locus_tag="VLD58_02980"
     CDS             complement(1163..1726)
                     /locus_tag="VLD58_02980"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSB53285.1"
                     /translation="MSDLTRGSPPPVLYLPRPSSWLTWHDYLFRPGLTVLDLAAGEGR
                     HALKAAQWGATVTAIDADENKLETGRDAAGRLGVNVDFQQLDLTTDWPAGTFDVVLVF
                     NYLDRARMDDIRARVAPGGVLVMETYLEWQRALGWGPSKSEHLLAPGELARLVAPMET
                     LHGREVFEPVESNKVRAVASIVAQQVA"
     gene            1736..3346
                     /locus_tag="VLD58_02985"
     CDS             1736..3346
                     /locus_tag="VLD58_02985"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase/oxidase"
                     /protein_id="HSB53286.1"
                     /translation="MAQLAAHPADLLVIGGGITGAGIARDAAMRGLRTILVDQNDLGF
                     GTSSRSSRLIHGGLRYLEEGDLKLVFEALRERKVLLTTAPHLVHPLPFIFPVHEGDRV
                     PLWKLWAGIWLYDLLAAFRNVRWHRLLGKRSLLREEPMLRERGLVGGVQYYDAQCDDA
                     RLVLATARAAIQHGALVANYVTVDSLIRTDGQVRGARVRDSLDGSTGALHAQVVVNAT
                     GPWCDRVRQLEDPAATPILRPTKGVHVMVRRERLGNSAAITLTSPIDGRVMFVLPWGD
                     FSYIGTTDTDTTEGPDEVRASPADIVYLLRSANAAFPNARLTEEDVLATWAGLRPLIA
                     PEAFVGASQVPREHLIQRGPGGMLTIAGGKLTTYRLMAAELVDHVTELLHQHDGRTRP
                     ARPPTDQEPLPGGEVTDLEPLGQPGLELGLFVEVIDFVLRCHGTECAAVFNLVRERRE
                     LGRRLVEGFPAIEAQVIHAVRRELAQRVEDVLVRRLHAWYEAPNHGAGAARRTAELMG
                     EELGWDPSRIAAEADSYVREAQGGLSAT"
     gene            complement(3348..4352)
                     /locus_tag="VLD58_02990"
     CDS             complement(3348..4352)
                     /locus_tag="VLD58_02990"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSB53287.1"
                     /translation="MPLPTGPDPLLATARALRNRGAWAELCALDGAGHVELPEVTVIR
                     AEADLRTGEFRSAHDRLVGLVPQLRAGDDPALCRRAVNMLGAAYFELGDLAPAEEMFG
                     LALELASRASDDLMVARASNNLGMIDNIRGAHDEALARYRLAIPAYQRLGSPAGLAET
                     YHNMAITCRDLEDLEQAERYERRAIEYGREAQNPRLLAMAHVGRAELGLLRGEPAVAD
                     AGARLGATEYERIPDPVGVADALRISGSARAMLRDPDGARQALDRAVELAREHGSALI
                     EAEAREARARLLAEYRLGSPVDDARMAIALYRQLRAVRQQAATEAWLQALDPSSGTGH
                     "
     gene            complement(4368..4997)
                     /locus_tag="VLD58_02995"
     CDS             complement(4368..4997)
                     /locus_tag="VLD58_02995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53288.1"
                     /translation="MKPRYCWLIAGAVAAIACSQGGSGGAGPGTDSVVQVEDSLTFLQ
                     PAPNGPHFGDDTVSFWAVKGQRREARLMYRPLAGHSDSVEFARFRVDDRSLVNRPDGS
                     PLATGDSILITLTISDSTRLIAGFEPAGLLFNPSRPARLALKYGEADPDLDHNGVVNA
                     ADTALIATFRIWRQEAPGEPWVSIPSSLSAGALEVEADIYGFTRYAVAY"
     gene            complement(4994..6358)
                     /locus_tag="VLD58_03000"
     CDS             complement(4994..6358)
                     /locus_tag="VLD58_03000"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSB53289.1"
                     /translation="MASRLPQLTLVRLSDSFAAIWPELASECGLDLVMADSGQEEAPT
                     PARLGGITAINVAGSEGTLGSVLSRLSHYGQAVAAVGASADHRVAMSAVRAGATEYFA
                     LPQDYELLRSWLLQRADQIRAADHRESFAASEAAKYRFDDILGESPALRKTLEQAARV
                     IPHAKVNVLIRGETGTGKELLARAVHYNGLRRAAPFVDVNCAAIPDQLLESELFGHEK
                     GAFTGATSAKPGLFELANRGTIFLDEIGHLSLQLQGKLLRVLEQRTIRRVGGTTMMPV
                     DVRVIAATHVDLAAAARRGEFREDLYYRLNVVELALPPLRDRRADIPLLADTFLTRFA
                     RDYSIPKPVLSQGALRALQMHSWSGNIRELRNVLERAILLGRERTLEAEHLGLEAQKT
                     APPSGGALPFPATMAEITRGAALAMVRLCNGNKSEAARRLAISRTRLLRLLAGRDDSD
                     TDDL"
BASE COUNT          990 a         2223 c         2263 g          982 t
ORIGIN      
        1 ggcgcggccc agcttcctgg cccactcctt cgacgcccag gcctgggcgt tggagagcac
       61 ctgcgacgcg aaggcctcgt gaatctcgac cagcccgaga tccttccagc tgatcccggc
      121 gcggtcgagc gccttgggca ccgcgaaggc cggacccatc agcagctgcc aaccggggtc
      181 gaccgcggcg agggcataac tccggaccgt gaccagcggg gtgtagccga gcgcccgggc
      241 cttcgactct tccattatca gcgtgaccgc ggcgccatcg gtgaggggcg acgagttgcc
      301 cgcggtgacg ctgccgtagc gccggtcgaa gaccggcttg agctgggcca gcgcctccat
      361 cgaggtgtcg ccccggatga gattgtcggt ggtgacgacc tcatccatgc cgcggccgcc
      421 gaaccagggc gcgacctcgc tggcgaagcg tccgctcgcg gtcgccgcgg cggcccgctg
      481 gtggctcatg tacgccaccc ggtcctgggc ctcacgggtg attccgttct ccttggccat
      541 cttctcggcc gactgcccca tcgattcccc ggtggacggc tcggcgatcg cgggcgacac
      601 cggcaccagg tccctgggcc ggatccggga gaaaatgccc agccgctggg tcaggctctt
      661 ggccttgctc gcctcgacca ggagctggct catcttcttc gaatgcagaa tcgggatgtc
      721 ggagagcgac tccaccccgc cggccaggat cacgtccgca tgaccaaggg tgatctggtc
      781 ggcggcgtag gtgatggcgg aaccggccga ggcgcaggcg cggttgagcg agaaggccgg
      841 gatttcgcgc ggcagctgtg ggagcaggct cacctcgcgc gccacattgg gggcgagcac
      901 cgaggcaatc acctgcccga aggcgacttc gtcgaccacc ttgccgtcga gattggtacg
      961 ctcgagcagt tcctgggtga cgcggcgggc cagctccacc gcggtcacgt tgcggaagac
     1021 ggtgccactc ttggcgaagg gggtccggag accggcgacg agaacgggac ggcgggaaga
     1081 catggaggac cgttgcctgc gttggcgcgc atgggacgac agcgggagag cgcctcgcgg
     1141 tggcgcgcct cgccgggcgc gcttaggcta cctgctgcgc gacgatcgag gcgacagcgc
     1201 gaaccttgtt gctctccacc ggctcgaaca cctcacgccc gtgcagggtt tccatcgggg
     1261 ccaccaggcg ggccagttcg cccggggcca ggaggtgttc gctcttgctg gggccccatc
     1321 cgagcgcacg ctgccactcg agataggttt ccatcaccag cacgccgccc ggggcgaccc
     1381 gcgcgcgaat atcgtccatt cgggcgcggt caagataatt gaacaccagg acgacatcaa
     1441 aagtgcctgc tggccaatcg gtggtcagat ccagttgctg gaagtcgaca ttgaccccga
     1501 gtcgcccggc ggcgtcgcgg ccggtctcca gcttgttctc gtccgcgtcg atcgccgtga
     1561 ccgttgctcc ccattgcgct gccttcaagg cgtgccgccc ttcaccagcg gcgagatcca
     1621 gcaccgtcag gccgggacgg aagagatagt catgccacgt gagccagctg ctcggacgcg
     1681 ggagatagag gacgggcggg ggcgacccgc gcgtgagatc ggacatcggt cctcggtggc
     1741 acagctcgcg gcgcatcccg ccgacctgct ggtcataggc ggtgggatca cgggcgccgg
     1801 gattgcccgg gacgccgcca tgcgcggcct ccggaccatc ctggttgatc aaaacgacct
     1861 gggattcggc accagctcac ggtccagccg cctgatccat ggcgggctgc gttacctcga
     1921 ggagggcgac ctcaagctgg tgtttgaagc cctccgcgag cgcaaggtgc tgctgacgac
     1981 ggccccgcac ctggtgcacc cgttgccgtt catctttccg gtccacgagg gcgatcgcgt
     2041 gcccctctgg aaactctggg ccggaatctg gctctacgac ctcctggccg ccttccgcaa
     2101 tgtgcggtgg catcggttgc tcggcaagcg gagcctgctc cgggaggagc cgatgctccg
     2161 ggagcgcggt ctggtgggcg gggtccagta ctatgacgcc cagtgcgacg atgcccgcct
     2221 ggtgctggcc accgcccgtg ccgcgatcca gcacggcgcg ctggtggcga actacgtgac
     2281 cgtcgacagt ctgattcgca ccgacggaca ggtgcgcgga gcccgggtcc gggacagcct
     2341 cgacggcagc accggggcgc tgcacgccca ggtggtggtc aacgcgaccg gcccctggtg
     2401 cgaccgggtc cgccagctcg aagatcccgc ggccacgccg atcctccgcc ccaccaaggg
     2461 cgtccacgtg atggtccggc gggagcgact ggggaacagc gccgccatca cgctgacctc
     2521 gccgatcgat ggccgcgtga tgttcgtgct cccgtggggc gacttctcct acatcggcac
     2581 caccgacacc gacaccaccg agggccccga cgaggtgcgc gcctcgcccg cagacatcgt
     2641 ctacctgctc cgttcggcca acgccgcctt tcccaacgcc cggctcaccg aagaagacgt
     2701 gctggccacc tgggccgggc tccgcccgct gatcgccccg gaggcctttg tcggtgcctc
     2761 gcaggtgccg cgcgagcacc tgatccagcg gggtcccggc ggcatgctga ccatcgccgg
     2821 cggaaagctc accacctacc ggctcatggc ggcagagctg gtggaccatg tcaccgagct
     2881 gctgcaccag catgatgggc gcacccgccc ggcccggccg cccacagacc aggagccgct
     2941 tcccggcggg gaagtcacgg acctggagcc gctgggccag ccggggctcg agctgggtct
     3001 gttcgtcgag gtgatcgact tcgtgctgcg ctgccacggc accgagtgcg ccgcggtatt
     3061 caacctggtg cgcgaacggc gcgagctcgg ccgcagactg gtcgagggct ttcccgccat
     3121 cgaggcccag gttattcacg cggtgcggcg ggagctggcg cagcgggtgg aggatgtgct
     3181 ggtgcgccgc ctgcatgcct ggtacgaagc cccgaaccat ggggccggcg cggccaggcg
     3241 cacggccgag ctgatgggcg aagagctggg gtgggatccg tcccggatcg cggccgaggc
     3301 cgacagctac gttcgggagg cccagggcgg cttgagcgcg acctgagcta atgaccggtt
     3361 ccgctggatg ggtcgagcgc ctggagccag gcctcggtcg ccgcttgctg ccgcactgca
     3421 cggagctgcc gatagagggc gatcgccatc cgggcgtcgt cgaccggact ccccaggcgg
     3481 tactccgcca gcagccgggc gcgtgcttct cttgcctcgg cttcgatgag ggcgctgcca
     3541 tgctcccggg ccagctccac cgcccggtcg agggcctgac gggcgccatc cggatcgcgg
     3601 agcatggcgc gggccgagcc ggagatccgg agcgcatccg ccaccccgac cggatcgggg
     3661 attcgctcat actccgtggc gccgaggcgg gcgccggcat cggccaccgc gggttcgccc
     3721 cggagcaggc cgagttccgc ccggcccaca tgggccatcg ccagcagccg cgggttctgc
     3781 gcctcccttc catactcgat cgcgcgccgc tcgtagcgtt ccgcctgctc caggtcctcg
     3841 aggtcgcggc aggtgatcgc catgttgtga taggtctcgg ccaggcccgc gggacttccc
     3901 agccgctgat aggcaggaat cgcgagccgg taacgcgcca gtgcctcgtc gtgcgcgccc
     3961 cggatgttat cgatcatccc cagattgttg ctggcccgcg cgaccatcag atcatccgac
     4021 gcccggctcg ccagctccag cgctagcccg aacatctcct ccgccggcgc cagatcgccc
     4081 agctcgaagt acgccgcgcc cagcatgttc accgcgcggc gacagagggc aggatcatcg
     4141 ccggcgcgaa gctgaggcac cagtccgacc agccggtcgt gagccgagcg gaactcgccg
     4201 gtgcggagat cggcctccgc ccggatgacg gtcacctccg gcagctcaac gtggccggcc
     4261 ccatccagtg cgcacagctc cgcccaggcg ccgcggttac gcagcgcccg cgccgtcgcg
     4321 agcaggggat caggccccgt ggggagtggc atcgacattg tcaggcgtca gtaggccacc
     4381 gcatagcggg tgaaaccgta gatgtcggcc tcgacctcga gcgcacctgc gctcaagctg
     4441 ctggggatgc tcacccaggg ctcacccggg gcctcctgcc gccagatcct gaaggtcgcg
     4501 atcagggcgg tgtcggccgc gttgaccacc ccgttgtggt cgaggtcggg atcggcctcg
     4561 ccgtacttga gggccagccg ggccggtcgc gagggattga acaggagccc cgctggctcg
     4621 aagcccgcga tcagccgggt cgagtcggag atcgtcagcg tgatcaggat cgaatcgccg
     4681 gtggccagcg ggctcccatc gggccggttg accagcgagc ggtcatccac ccggaagcgg
     4741 gcgaattcca ccgagtcgct gtggccggca agggggcgat acatcaggcg ggcctcccgc
     4801 cgttgcccct tcaccgccca gaacgacacg gtgtcatcgc cgaagtgagg gccgttggga
     4861 gcgggctgga ggaaggtgag cgagtcctcc acctgcacca cgctgtcggt gcccggaccg
     4921 gcgccgccgg acccgccctg agagcacgca atcgccgcga ctgccccggc aatgagccag
     4981 cagtatctcg gtttcatagg tcgtcggtgt cggagtcatc ccgtccggcg aggaggcgca
     5041 ggagacgggt acgagagatg gcgagacggc gcgccgcctc gctcttgttg ccattgcaga
     5101 gccgaaccat cgccagcgcg gcgccgcggg tgatctccgc catcgtcgcc gggaaaggaa
     5161 gggccccgcc gctcgggggc gccgttttct gggcttcgag cccgagatgc tcggcctcga
     5221 gggtgcgttc gcggccgagg agaatggctc gctcgagcac gttgcggagt tcgcggatgt
     5281 tgccggacca ggaatgcatc tgcagcgccc gcagggcgcc ctgggacagc accggcttcg
     5341 ggatgctgta gtcccgggcg aagcgggtga ggaaggtgtc ggcgaggagc ggaatgtcgg
     5401 cccggcggtc cctgagcggc ggcagtgcca gctccaccac gttgaggcgg tagtagagat
     5461 cctcccggaa ctcgccccgg cgcgccgcgg cggcgagatc cacgtgggtc gccgcgatca
     5521 cgcggacatc aaccggcatc atcgtggtcc cgcccacccg gcggatggtg cgctgctcca
     5581 gcacccgcag gagtttgccc tgcagctgga gcgagagatg gccgatttcg tcgaggaaga
     5641 tggtgccgcg gttggcgagc tcgaacaggc cgggcttggc gctggtcgcg ccggtgaagg
     5701 cccccttctc gtggccgaac agttcgctct cgagcagctg atcggggatc gccgcgcaat
     5761 tcacgtcgac gaagggcgcc gctcggcgca ggccattgta gtgaacggcg cgggccagca
     5821 gttccttgcc ggtgccggtt tcgccccgga tgagaacgtt gaccttggcg tggggaatga
     5881 cgcgggcagc ctgctccagc gtcttccgga gtgcggggct ctcgcccagg atgtcgtcga
     5941 agcggtactt cgccgcctca ctcgcggcga aggactcccg gtgatcggcc gcccggatct
     6001 ggtcggcccg ctggagcaac cagcttcgga gcagctcgta gtcctgcggc aaggcgaagt
     6061 actcggtcgc tcctgcccgc accgcgctca tcgccacccg atggtcggcc gatgcgccga
     6121 ctgcggccac agcctgaccg tagtgcgaca ggcggctcaa cacactcccg agcgtcccct
     6181 cggaacccgc gacgttgatc gcggtgattc cacccagcct ggccggcgtg ggcgcttcct
     6241 cctgccccga gtcggccatg accaggtcga ggccgcactc ggatgccagt tcgggccaga
     6301 tggccgcgaa cgaatcgctg agccgcacca gggtcagctg ggggagacga gaagccaaga
     6361 ccactccacc gattccggag ggtgagcgcg gaggacctct ggcccagtgt gaggcagaaa
     6421 ccaagccggg aattcgaggt cagattggcg gcgctaat
//
LOCUS       DATIFF010000200         1450 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_28480, whole genome shotgun sequence.
ACCESSION   DATIFF010000200 DATIFF010000000
VERSION     DATIFF010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28480"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="VLD58_03005"
     CDS             <1..186
                     /locus_tag="VLD58_03005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53290.1"
                     /translation="TRGKYLRVNWPDGTSVEVGFLSKGRGKAQVAVQHSRLPDQAAAA
                     RMKAFWGERLEALAALD"
     gene            283..645
                     /locus_tag="VLD58_03010"
     CDS             283..645
                     /locus_tag="VLD58_03010"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HSB53291.1"
                     /translation="MKYLCLIYDAEAVLNAMPQAEMQKMMGEYRAFGESLRQSGQHLG
                     SNRLRPVESATTVRVRNGKVSTTDGPFAETKEQLGGYFLIEARDLNEAIQIAGRVPSA
                     RTGSVEVRPIWEVPADAS"
     gene            642..>1450
                     /locus_tag="VLD58_03015"
     CDS             642..>1450
                     /locus_tag="VLD58_03015"
                     /inference="COORDINATES: protein motif:HMM:NF042530.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6596 domain-containing protein"
                     /protein_id="HSB53292.1"
                     /translation="MNEEAGHPIRERVEEVYRAESRRVLATLIRLLGDFELAEEATHD
                     AFAVAVERWPREGVPANPRAWLISTGRFKAIDGLRRRARFDAAQSHLADQIQPYDNPS
                     GEAPGVEDDRLRLIFTCCHPALQREAQVALTLRAVCGLTTEEIARAFLVPVPTMAQRL
                     VRAKAKIRDADIPYEVPPAEALRQRLDAVLAVIYLVFTEGYAPTVGDTLMRPALCAEA
                     IRLGRLLLDLLPGAREADCLVALMLLQDARRAARLSAEGELVLLEDQDRGR"
BASE COUNT          224 a          490 c          518 g          218 t
ORIGIN      
        1 actcggggga agtacctccg ggtaaactgg ccggacggga cctccgtaga ggtcggcttc
       61 ctgagcaaag gccggggaaa ggcccaggtg gcggtccagc actcccgcct gcccgaccag
      121 gccgcggccg ccaggatgaa ggccttctgg ggtgaacggc tcgaggccct ggctgcgctc
      181 gactgaaccc acgacagacc gcctccgggc ggtctgtcga tttccccctc ctccagacga
      241 ctacttgtcg tccacattcg gttcaccctc atggaggatg ccatgaagta cctgtgcctt
      301 atctacgacg ccgaggcggt gctgaacgcc atgccgcagg cggagatgca gaagatgatg
      361 ggagagtacc gggcctttgg cgagtcgctg aggcagagcg ggcagcatct cgggagcaac
      421 cgcctccggc cggtagagtc cgcgaccacc gtccgggtca ggaacgggaa ggtctccacc
      481 accgatggac ccttcgccga gaccaaggag cagctcgggg ggtacttcct gatcgaagcc
      541 cgtgacctca acgaggcgat ccagattgcc ggacgggttc cctccgcccg gaccgggagt
      601 gtcgaggttc ggccgatctg ggaagtgccg gctgacgctt catgaacgag gaggccggcc
      661 acccgatccg ggagcgggtc gaggaggtgt accgcgccga gtcgcggcgg gtgctcgcca
      721 cgctgatccg gctgctgggc gacttcgagc tggcggagga ggcaacccat gacgcctttg
      781 ccgtcgcggt cgagcggtgg ccccgcgaag gtgtgccggc caatccccgc gcctggttga
      841 tttccaccgg gcgcttcaag gcaatcgacg gactgcggcg ccgggcgagg ttcgacgccg
      901 cgcagtcaca tctcgcggat cagatccagc cctacgacaa cccgtccggc gaggcccctg
      961 gcgtcgaaga cgaccggctc cggctcatct tcacctgctg ccacccggcg ctgcagcgcg
     1021 aggcccaggt ggcgctcacc ctgcgcgcgg tgtgcggcct gaccaccgag gagatcgcgc
     1081 gggccttcct ggtgccggtg ccgaccatgg cgcagcggct ggtgcgggcc aaggcgaaga
     1141 tccgcgacgc cgacattccc tacgaggtgc cgccggcgga ggcgctgcgc cagcggctcg
     1201 atgcggtgct ggcggtgatc tacctggtgt tcaccgaagg ctacgcgccg acggtcgggg
     1261 acacgctgat gcggccggcg ctgtgcgccg aggcgatccg cttgggccgc ctgctgctcg
     1321 atcttctgcc gggcgcccgc gaggccgatt gcctggtcgc cctgatgctg ctgcaggacg
     1381 cccggcgcgc ggcacggctc agcgccgagg gcgagctcgt gctgctcgag gaccaggacc
     1441 gcggccgctg
//
LOCUS       DATIFF010000201         1779 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_489753, whole genome shotgun sequence.
ACCESSION   DATIFF010000201 DATIFF010000000
VERSION     DATIFF010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_489753"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..241
                     /locus_tag="VLD58_03020"
     CDS             <1..241
                     /locus_tag="VLD58_03020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53293.1"
                     /translation="AAAWGRAVFFADNLLVNAGFVAAGLWVRDLIMLVASGTPQGQLL
                     LELGVYSPLQALTTAAAGALVLYAFRQWFAVRLDT"
     gene            238..>1779
                     /gene="mrdA"
                     /locus_tag="VLD58_03025"
     CDS             238..>1779
                     /gene="mrdA"
                     /locus_tag="VLD58_03025"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR03423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HSB53294.1"
                     /translation="MTGFDSYRVGERAQVARWIISATFLLLLGAFFRTQIIQHEKFQL
                     KAETNRLRPIPLSAPRGAIYDYRGGIIAENVPGYSVKLLASSADSLRAVLARVRQVVP
                     IDSSDVSEVLRRFQTARYQPVVVFGDASFETVSRLEEHRVALPGLVIQAEPKRLYPAG
                     RAVAHLVGYVGEVTDADLESERYEALNPGAIVGKAGLEQAYDDTLRGTEGVRYIEVNA
                     RGRLVREEASTASLPPTPGHPIETTVDLDLQRFIDSIWPPNVRGAMVAITPSGEIRAL
                     YSAPSYDPNAFIGGISPQLWRALNSDEARPLLDRAIQARYPPASPFKLAISSMALRRG
                     LIGLDSHMPVPCRGGLRMGNRVFRCWKKEGHGSLDLIGAIAASCDVYFYQLGLKLGLD
                     AIIEDGVLRGFKDKTGLDVGTEVNPIYPSSTAYFDRLYGPRRWSQAATTLNFSIGQGE
                     NTQTLINMVHFYAALAGNGEEVAPFIVRPRSGAKPRSLGLTAEQLQGLRQGLIAVVER
                     GTAAAS"
BASE COUNT          266 a          601 c          631 g          281 t
ORIGIN      
        1 tgccgcggcc tgggggcggg cggtgttctt cgccgacaac ctgctggtga acgcggggtt
       61 tgttgcggcc gggctgtggg ttcgcgacct catcatgctg gtcgccagcg ggactccgca
      121 ggggcagctc ctgctggagc taggcgtcta cagcccgctc caggcgctca ccacggccgc
      181 ggcgggtgcg ctcgtgctgt acgccttccg ccagtggttc gccgtgaggc tcgacacgtg
      241 accgggttcg actcgtaccg ggtcggggag cgcgcccagg tggcgcggtg gatcatctca
      301 gcgacgtttc ttctgctcct cggcgctttc ttccggaccc agatcatcca gcacgagaag
      361 ttccagctca aggcggagac caaccgcctg cgcccaatcc cgctcagcgc gccgcggggc
      421 gcgatctacg actatcgcgg cgggatcatc gccgagaacg tgcccgggta ttcggtcaag
      481 ctgctggcct cctcggcgga ctcgctgcgg gccgtgctgg cgcgggtgcg gcaggtggtg
      541 ccgatcgaca gcagcgacgt ctccgaggtg ctccggcggt tccagactgc ccggtaccag
      601 ccggtggtcg tgttcggcga tgcctcgttc gagaccgtct cgaggctcga ggagcaccgg
      661 gtggcgctgc ccgggctcgt catccaggcg gagccgaagc gcctctaccc ggcgggcagg
      721 gccgtggccc acctggtggg ttacgtgggc gaggtgacgg acgcggatct cgagtcggag
      781 cgctacgaag cgctcaaccc gggagcgatc gtgggcaagg ccgggctgga gcaggcgtac
      841 gacgacacgc tccgggggac cgagggcgtc cggtacatcg aggtgaacgc gcgcggacgg
      901 ctggtgcggg aggaggcgag cacggcctcg ctgcccccga cgcccgggca ccccatcgag
      961 acgacggtcg atctcgacct gcagcggttc atcgacagca tctggccgcc caatgtccgg
     1021 ggcgccatgg tggcgatcac cccgagcggg gagatccggg cgctgtactc ggcaccgagc
     1081 tacgacccca acgcgttcat cggcggcatc tcgccccagc tgtggcgggc gctcaactcg
     1141 gacgaagccc ggccgctcct cgaccgggcc atccaggccc gctacccgcc ggcctcgccg
     1201 ttcaagctgg cgatctcgtc catggcgctc aggcgggggc tcatcggcct ggacagccac
     1261 atgccggtgc cctgccgggg cgggctcaga atgggcaacc gcgtgttccg ctgctggaaa
     1321 aaggagggcc acgggtcgct cgacctgatc ggagcgatcg cggccagctg cgacgtctac
     1381 ttctaccagc tcgggctcaa gctcggcctt gacgccatca ttgaagacgg cgttctcagg
     1441 ggattcaagg acaagaccgg gctcgacgtc ggcaccgagg tcaacccgat ctacccgtca
     1501 tccaccgcct acttcgatcg gctgtacggc ccccggcggt ggagccaggc agcgaccacg
     1561 ctcaacttct ccatcggtca gggtgagaac acccagactc tgatcaacat ggttcacttc
     1621 tatgcggcat tggccgggaa cggcgaagag gtcgccccct tcatcgtgag gccccggtca
     1681 ggcgcgaagc cgcgatcgct cgggctcacg gcggagcagc tgcaggggct ccggcagggc
     1741 ctgatcgcgg tggtggagcg gggaacggcc gctgcgtcc
//
LOCUS       DATIFF010000202         1106 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1566723, whole genome shotgun sequence.
ACCESSION   DATIFF010000202 DATIFF010000000
VERSION     DATIFF010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1566723"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1069
                     /locus_tag="VLD58_03030"
     CDS             <1..1069
                     /locus_tag="VLD58_03030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53295.1"
                     /translation="VVGPDGRLYPTWHPPIGPGGCSFGHEHGRDPRGSNLFKDIGPVP
                     FGYANEMLAISDPANVRDEDHFGHKVEWENDIYLRLADGEREIGKVRCDVLVKLHQGT
                     HSRDAFANNLHELVYHLHCDDGSAVDITLLTAIGQPGHFVRACDRVISVDAGPPTPAN
                     SPVGDGVRLIPDRSCIEQYMLRPPGQPSSFDQALHETWQTSSTIRREDGEPLAFFNPY
                     FQVLLPSRYHDPARAPAVGRSIDVCYEETPEGHRATGGACAESTGGGLDAGVTYDDPR
                     SRFNGAARFVDINVTRIRNLRGPPLWYTDAFGQRGAVAPFRGSIRQRMGQVDRDLGLP
                     VGGPRLGEDRDYGGSEVRSPN"
BASE COUNT          168 a          373 c          388 g          177 t
ORIGIN      
        1 cgtggtcggt ccggatggca ggctgtaccc cacctggcat ccgccgatcg gccccggcgg
       61 ctgcagcttc gggcacgagc acggccggga tccccgcggc tccaatctct tcaaggacat
      121 cgggccggtg ccgttcggct acgccaacga gatgctcgcc atctcggacc cggccaacgt
      181 gcgggacgag gatcatttcg gccacaaggt cgagtgggag aacgatatct atctccggct
      241 cgccgacggc gagcgggaga tcggcaaggt ccgctgcgac gtcctcgtca agctgcacca
      301 gggcacccac tccagggatg ccttcgccaa caacctccac gagctcgtgt atcacctgca
      361 ttgcgatgac ggtagcgcgg tggacatcac cctcctcacc gcgatcggcc agccgggcca
      421 cttcgtccgc gcctgcgacc gggtgatctc ggtggacgcg gggccgccga cgccggcgaa
      481 ctcgcccgtc ggcgacggcg ttcgcctgat tccggatcgg agctgcatcg agcagtatat
      541 gctgcgcccg cccggccagc cctcgagttt cgatcaggcg ctgcatgaga cctggcagac
      601 ctccagcacg atccgccggg aggatggcga gccgctcgcg ttcttcaatc cgtatttcca
      661 ggtgctgctg ccgagccgct atcacgatcc ggcgcgtgcg ccggccgtcg gccgctccat
      721 cgacgtgtgt tacgaggaga caccggaggg gcatcgggcg acgggtgggg cctgcgcgga
      781 gtcgaccgga ggaggactgg acgcgggcgt gacgtacgac gatccccgct cccgcttcaa
      841 tggcgccgcc cgcttcgtgg atatcaacgt caccaggatc cggaatctgc ggggcccacc
      901 gctctggtac accgatgcct ttgggcaacg gggcgcggtc gcgccattcc ggggctcgat
      961 tcggcagcgg atgggtcagg tggaccgtga cctcggtctt ccggtcggcg ggccgcggct
     1021 gggggaggac agggactacg gcgggtcgga agtgcggtcg ccgaattagg ggacctgggc
     1081 gtcgcccgtg tcgggcgggg caccgc
//
LOCUS       DATIFF010000203         3414 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1874863, whole genome shotgun sequence.
ACCESSION   DATIFF010000203 DATIFF010000000
VERSION     DATIFF010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3414
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1874863"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..283)
                     /locus_tag="VLD58_03035"
     CDS             complement(<1..283)
                     /locus_tag="VLD58_03035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53296.1"
                     /translation="MTAPAESRSAAREFLVTLRLGALAWAMMAAQELLLFARPTPYGG
                     AYVRDAAGYFGRALFYNLMGVLLVVVPFLVRWLISYRGAASARNARRWHT"
     gene            complement(293..1474)
                     /locus_tag="VLD58_03040"
     CDS             complement(293..1474)
                     /locus_tag="VLD58_03040"
                     /inference="COORDINATES: protein motif:HMM:NF024863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HSB53297.1"
                     /translation="MTTPAGEARLSHRTKRRLLVLLAVVPSLLVLLAAEIYIRATTRY
                     EDLWALTGRAVARRPVADWAFLDAFSALRGRPGVYHDGAVTKTVNREGFISTPEIAPA
                     KPPHTIRIAFLGESSTAGTGTLLPDSVTWPWQVAENLRRRPGRTDKIEFINAALGGYS
                     TFESMGRLWSRVRFYSPDIVVVYHGWNEMYYFKQVDKIADWRTLPDGSWGLEASVPVT
                     LYQPRWYDWLARYSQLLTKVRLHFSPALNGEAGGGQLQTTLADHYDKRGLEIFRTNLR
                     LIRSTAQTLGIELFVGKQATLIVAGLPASERARCRYDFHGFDHDAHVDAFNQIYRVID
                     QEIPADHVIDVTPLSGHPENFHDHIHPTDLGAARTAEIMANALAPAVAAIEARHAREP
                     R"
     gene            1684..3231
                     /locus_tag="VLD58_03045"
     CDS             1684..3231
                     /locus_tag="VLD58_03045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53298.1"
                     /translation="MADTPLVERDSLGRPIIKYIEVHRSDIFDSTESHGFLAKVMNGL
                     HFMTAPGVVNREILFHVGEPYDSIDVAETARNLRTLGVFRKVKLDSVTTDSGFVVKVY
                     TQDGWSTQSDVRFRSAGRQTDWQAALIERNLVGTATFFAIRYRHTPDRNQLGFQFLQP
                     RLFKRTVLLGLRYETRTDGKRGSVALERPFFSLRDKAGLTTLLDVRNERVLRFREGFA
                     DPSDSLRRKYLLGKVEVAKAIRRGNRGYVRVGFNAQVRRDDFGIWPQKNLDNNVTGAV
                     GTFLEWRRANFVVTRGFQKIGQDEDVDVSNFARVGLTLAPSFFGYDSTGVGGLAQVRV
                     GARVSKGGFAWIDARVNGLYTSGGLDSGSVTLGGTAVLAPMRRHLLIGHADIGWIKNP
                     LPSGEFDLGFSVGPRGFPIHAFTGDRTYLATAEYRYIFGEDVFKAVDMGLAGFIDHGG
                     AWYAGSPRRTGTNLGLGLRLGPSRAASSNPTRLDLAYRFKNDRQKAGWVFVVASGLVF
                     TTQPRGQ"
BASE COUNT          533 a         1124 c         1184 g          573 t
ORIGIN      
        1 cggtgtgcca gcgccgggcg ttccgggccg atgcggcgcc gcggtaggaa atgagccacc
       61 ggaccaggaa gggcaccacc accagcagca cgcccatcag gttgtagaag agtgcccgcc
      121 cgaaatatcc cgcggcatca cgcacatagg cgccgccgta gggcgtgggc ctcgcgaaga
      181 ggagcagttc ctgcgccgcc atcatggccc aggcgagcgc cccgagtctg agcgtcacca
      241 ggaactcgcg ggcggcgctc cgtgactcag cgggagcggt catgcggagc ggtcagcgcg
      301 gctcgcgggc gtggcgggcc tcgatggccg ccaccgccgg tgcgagcgcg ttggccatga
      361 tctcggccgt acgcgcggcg ccgagatcgg tggggtgaat gtgatcgtga aaattctcgg
      421 gatgtcccga gagcggcgtc acgtcgatga catgatccgc cgggatttcc tggtcgatga
      481 cccggtagat ctgattgaag gcgtcgacgt gggcgtcatg gtcgaatccg tggaaatcgt
      541 aacggcagcg ggcccgttca ctcgccggga gaccggccac gatcagggtg gcctgttttc
      601 cgacgaagag ctcgatcccc agcgtctgcg cggtggaccg gatcaggcgg aggttggtgc
      661 ggaagatttc gaggccgcgc ttgtcgtagt gatcggccag ggtggtctgg agctggccgc
      721 cgccggcctc accattgagg gccggagaga aatgcagccg gaccttggtg aggagctggg
      781 agtatcgcgc cagccagtcg taccatcgcg gctggtagag agtgaccggc accgaggctt
      841 cgagtcccca cgatccgtca ggcagggtgc gccagtcggc gatcttgtcg acctgcttga
      901 agtagtacat ctcgttccag ccgtgataca ccaccacgat gtcggggctg tagaagcgca
      961 cccggctcca gaggcggccc atcgattcga aggtggagta gccacccagg gcggcgttga
     1021 tgaactcgat cttgtcggtg cggccggggc ggcgccggag attctccgcc acctgccagg
     1081 gccaggtcac cgaatcgggg agcagggtcc cggtgccggc cgtcgaggac tcgccgagga
     1141 aggcgatccg gatggtgtgg ggtggcttgg cgggagcgat ctcgggagtc gagatgaacc
     1201 cttcccggtt caccgtcttg gtaacggcgc cgtcgtgata cacgccgggg cggccgcgca
     1261 gggccgagaa ggcatcgagg aaggcccagt cggccacggg ccgcctggcc acggcccggc
     1321 cggtcagggc ccagaggtcc tcgtaacggg tcgtggcgcg gatgtagatc tccgccgcca
     1381 gcagcaccag gaggctgggc accacggcca gcagcaccag cagccggcgc ttggtgcggt
     1441 gtgacagccg ggcttcaccg gcgggcgtgg tcatcagggc atcctcttac gaaagcgcgg
     1501 gttacgggca ggtattctaa tggagccggg ctgcccttat cattacgcgc cccccgtatc
     1561 cggagctggt ttctgcgccg ctggtgtctc gccctccttt cctttgtcat cacgctgccg
     1621 gctgccgccc aggacagcac ctcgcaggct ccccgggatt ccgcgttcgg tcccatcggg
     1681 gtggtggccg acactccgct ggtggagcgg gattcgctgg gccggccgat catcaagtac
     1741 atcgaagtcc accgctcgga catcttcgac tcgaccgagt cccacggctt cctggccaag
     1801 gtcatgaacg ggctccattt catgacggcg ccgggggtgg tcaaccgcga gatcctcttc
     1861 cacgtcggcg agccgtacga ttcgatcgat gtggcggaga ccgcccgcaa tctccgcacg
     1921 ctgggagtct tccggaaagt gaagctcgac agcgtgacca ccgacagcgg gttcgtggtg
     1981 aaggtgtaca cccaggacgg ctggtccacc cagagcgatg tgcggttccg gagtgccggg
     2041 cgccagaccg actggcaggc cgccctgatc gagcggaacc tggtgggcac ggccactttc
     2101 ttcgccatcc gctaccgtca taccccggac cgcaatcagc tcggcttcca gttcctgcag
     2161 ccgcggcttt tcaagcgcac ggtgctgctc gggctccgct acgagacccg gaccgacggc
     2221 aagcggggct cggtcgcgct cgagcgcccc ttcttctccc tgcgcgacaa ggcgggactc
     2281 acgaccctgc tcgatgtgcg gaatgagcgg gtgctccgct tccgcgaggg cttcgccgat
     2341 ccgagcgact cgctccggcg gaagtacctc ctcggcaagg tcgaggttgc caaggcgatc
     2401 cgccgcggca accgcggata cgtccgggtg ggcttcaacg cccaggtgcg tcgggacgac
     2461 ttcgggatct ggccccagaa gaacctcgac aacaacgtga cgggcgcggt gggcaccttc
     2521 ctcgagtggc ggcgggccaa ttttgtggtg actcgcggct tccagaagat cggccaggac
     2581 gaggacgttg atgtaagcaa cttcgcccgg gtggggctca cactcgcccc cagcttcttc
     2641 ggctacgact ccaccggggt tggcgggctg gcccaggtcc gggtcggggc ccgggtgtcg
     2701 aaggggggct ttgcctggat cgacgcgcgg gtgaacggcc tctacacctc cggcgggctc
     2761 gactccgggt cggtgacgct ggggggcacc gcggtgctcg ccccgatgcg ccgtcacctg
     2821 ctgatcggcc atgccgacat cgggtggatc aagaacccgc tgccctcggg cgagttcgat
     2881 ctcgggttct cggtgggccc ccgcggcttc cccatccacg ccttcaccgg cgaccggacc
     2941 tacctcgcca ccgcggagta ccgctacatc ttcggtgagg atgtcttcaa ggcggtcgac
     3001 atgggcctgg ccgggttcat cgatcatggc ggcgcgtggt acgcgggcag cccccgacgc
     3061 accggcacca acctgggcct cggcctccgg cttggcccgt cccgggccgc gtcgtcgaat
     3121 cccacccggc tggacctcgc ctaccggttc aagaacgacc ggcagaaggc cggctgggtg
     3181 ttcgtcgtgg cctcgggcct ggtgttcacc acccagccgc ggggccagta acggaccgga
     3241 ctgcaggttg gaaggattgc gaaaggatcc tgtcatgacg acgcccgacg ccgcctcgcc
     3301 tccgcccgcc cgccggctgc cgaagctccg ctcggtgctg cttctggcgg tgctgattcc
     3361 gctgctgctg ctctcgatct acacctggct cgcgctccac tgggactact ccaa
//
LOCUS       DATIFF010000204         1521 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_797969, whole genome shotgun sequence.
ACCESSION   DATIFF010000204 DATIFF010000000
VERSION     DATIFF010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1521
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_797969"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            112..903
                     /locus_tag="VLD58_03050"
     CDS             112..903
                     /locus_tag="VLD58_03050"
                     /inference="COORDINATES: protein motif:HMM:NF021214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HSB53299.1"
                     /translation="MGLVLLGGLYVFLGGLRAPRRRVAAFAGSLLVLLASLNGPLHDL
                     SDEYLFSAHMVQHLVLTLLFPPLFLYGLPAELVRKVIRPAGLQAVAAVLIRPVPAAAI
                     FSAPIILWHLPPFYEAAMRHHGLHIVQHLVFLATAVVMWWPVLSPVPELPRASYPGQM
                     LYLFLLGIPMSIVGAMITLADAPLYPFYAAAPRVWGLTPLQDQQIGGLIMWVPGGLVF
                     WAAMTVVWFRWAGREERGEVERRVPLEAYGLPGGASPALPPADAS"
     gene            complement(869..1366)
                     /locus_tag="VLD58_03055"
     CDS             complement(869..1366)
                     /locus_tag="VLD58_03055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53300.1"
                     /translation="MRLTRVLREGFWAGCIGASAVAAWFFVVDLVHGQAFFTPAMLGS
                     AVFWGATGPAQVVIEYSRVVGYTMIHVSAFVVIGTIAAALTAQTEDTPPVLYLIVVLA
                     CCFEVGFYVLVALLAQPLLGALAWWSVAIGNGIAAGAMGTYLWRQHPAIALELKKHPL
                     GATQD"
BASE COUNT          197 a          519 c          524 g          281 t
ORIGIN      
        1 gtgatgctgg gactgctgtt cctcttcggg gtgttcgccc tgaaatcctg agtgccagcg
       61 cccgccgccc cggcagcctg ggggcattgg gatctgcacc cgagcgtggt tgtggggctc
      121 gtcctgctgg gcgggctcta cgtgtttctg ggggggctcc gagctccgcg gcgccgggtc
      181 gcggcgttcg cgggctctct cctggtcctg ctggcgtcgc tcaatgggcc gctgcacgat
      241 ctgtcggacg aatacctctt cagcgcccac atggtccagc acctggtgct gacgctgctc
      301 ttcccgccgc tgtttctcta cggcctgccc gccgagctgg tccgcaaggt gatccggccc
      361 gccgggctgc aagccgtggc ggccgtcctg atccgccccg ttccggcggc cgccatcttc
      421 tcggcgccga tcatcctttg gcacctgccg ccgttctacg aagccgcgat gcgtcaccac
      481 gggctgcaca tcgtgcagca tctggtgttc ctcgccaccg ctgtcgtgat gtggtggccg
      541 gtgctgtcgc cggtcccgga gctgccgcgt gcctcgtatc cggggcagat gctctacctg
      601 tttctgctcg ggattccgat gtcgatcgtg ggagcgatga tcaccctcgc cgacgcgccg
      661 ctgtatccgt tctatgccgc cgcgccgcgg gtgtggggcc tcacgccgct gcaggatcag
      721 cagatcggcg gcctgatcat gtgggtgccg ggcgggctgg tgttctgggc ggcgatgacc
      781 gtcgtgtggt tccgctgggc cggccgggag gagcggggag aagtggagcg gcgggtgccg
      841 ctcgaggcct acggtctccc gggtggcgct agtcctgcgt tgcccccagc ggatgcttct
      901 tgagctcgag cgcgatggcg gggtgctgcc gccacagata ggtgcccatg gcgcccgccg
      961 cgatcccgtt gccgatcgcg acgctccacc aggcgagcgc ccccagtagc ggctgtgcca
     1021 gcagcgctac gaggacgtag aaccccactt cgaagcagca cgcgagcacg acgatcaggt
     1081 acaacaccgg gggggtgtct tcggtctggg ccgtgagcgc cgcggcgatc gttccgatca
     1141 ccacgaacgc actgacgtga atcatggtgt agcccacgac gcgtgagtac tcgatcacga
     1201 cctgggcggg gccggtcgcg ccccagaaga cggccgagcc gagcatggcg ggagtgaaaa
     1261 acgcctggcc gtgcaccagg tcgacgacga agaaccaggc cgccacggcg ctcgccccga
     1321 tgcatcccgc ccagaaccct tcgcgcagaa ctcgcgtcag tctcatgcgg ccctccaatg
     1381 acggtgcgtg cggccaatat acgggcagcc ccacctcggg ctagattagc gcgtcccggg
     1441 gaggttcgac atgcgacggt ccgcgttcta cgccctctgc ctcttggccg gcgcgctgct
     1501 gttcggcgtc gccggactgt t
//
LOCUS       DATIFF010000205         1650 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1414008, whole genome shotgun sequence.
ACCESSION   DATIFF010000205 DATIFF010000000
VERSION     DATIFF010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1650
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1414008"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..993)
                     /locus_tag="VLD58_03060"
     CDS             complement(<1..993)
                     /locus_tag="VLD58_03060"
                     /inference="COORDINATES: protein motif:HMM:NF014428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HSB53301.1"
                     /translation="MLCVLGAAAGCGGGGSSGPNTNPTQIVASAGENQVGAAGQQLGA
                     ALEVTVKDGSGSPVANVSVTWAVASGGGSVTPGSNTTGADGKATATRTLGPAAGAQTV
                     TATVSGLTPATFHHIAQIQGATQIGANVGLIRSDSVLSTAPFSVVVRDQNSQAVAGVT
                     VTWSLSGGGGNLSQPTSITDASGIASVTLTLDQVAAPRSVQAAVTGLQGSPVQFAENG
                     VAGNATQMALSGGNFQAGPAGGDLATQLGVLVKDAHGNVKPGVTVTWAVFGGGSVSPA
                     TPITNASGIASVTRTLGATAGVYRDTASVTGLSGSPVAFEDTAGAVDTIQVRDNF"
     gene            1288..>1650
                     /locus_tag="VLD58_03065"
     CDS             1288..>1650
                     /locus_tag="VLD58_03065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53302.1"
                     /translation="MDVDLTLKRWGVPVRNGSRYVGCRLSYDGPWVIAPVRMRPAAGP
                     PSGKERRSAERLTLELAGLCLGLSDRRDAPTIGQPPAIAIDPLKDLLTLPAVVAHEAK
                     NPLSGARAGLQLTMESLGR"
BASE COUNT          243 a          598 c          552 g          257 t
ORIGIN      
        1 gaaattgtct ctgacctgaa tcgtatccac cgcccccgct gtatcctcga acgccacggg
       61 cgagcccgag agcccggtga cgctcgccgt atccctgtag acaccggcag tcgcccccag
      121 cgtccgggtg acggaggcaa tccccgaggc gttggtgatc ggtgtagcag gcgacaccga
      181 cccgccgccg aagacggccc aggtcaccgt aacgcccggc ttcacgttgc cgtgggcatc
      241 cttcaccagc acgccaagct gggtcgcgag gtcgccgcct gcgggccccg cctggaagtt
      301 gccgccgctc agggccatct gtgtcgcgtt ccccgccacg ccgttctcgg cgaattgcac
      361 cggagacccc tggaggccgg tcactgccgc ctgtaccgag cggggcgcgg cgacttggtc
      421 gagcgtcagg gtgacgctgg cgatgccgct cgcatccgtg atcgaggtgg gctggctcag
      481 attcccgccc ccgccgctga gcgaccaggt gaccgtcacg ccggcgaccg cctggctgtt
      541 ctggtcccga accacgactg agaagggggc tgtgctgagc acgctatccg aacgtattag
      601 gccgacattc gccccgatct gcgtcgcgcc ctggatctgg gcgatatgat ggaatgtggc
      661 cggggtaagc cccgacaccg tggcggtgac tgtctgcgca ccggcggccg gccccagcgt
      721 ccgcgtggcg gtcgccttgc cgtccgcccc ggtggtgttg ctcccgggcg tcaccgatcc
      781 gccgccgctc gccacggccc aggtgacgct gacgttggcc acggggctcc ccgagccgtc
      841 cttgaccgtc acctccaggg ccgctcccag ctgctggccg gccgccccca cctggttttc
      901 acccgccgag gcgacgatct gggtcggatt ggtgttggga cccgagctgc cgccgccgcc
      961 gcagcccgcc gccgccccga ggacacagag catttgccaa cgacgacgct tcacgaggca
     1021 cctccaggtg tgtgaagtaa tcgagattgt accatttgcg acccatagtt gctactttag
     1081 gtgcgccttt cacggccatg gcggattcac accagggggt gcgcccgggt ggggacggag
     1141 acatttcgag gcagtgccgg ggagatcctc cggcaagcga gcgtagcact cgacggcaag
     1201 ccggtgacgc tctgggaggt caccgacggg ccatcgttga taccccgagc gtcaagcgat
     1261 cccagcccgc gtcaccattt caccaacatg gacgtcgacc tcaccctgaa gcggtggggc
     1321 gtccccgtgc gcaacggcag ccgctacgtc gggtgccggt tgtcctacga cgggccctgg
     1381 gtgatcgcac ccgtgcgcat gagacccgcg gcgggaccgc cctcggggaa ggagcggcgc
     1441 agcgccgagc gcctcacgct ggagctcgcc ggcctgtgcc tgggcctctc cgaccgccgg
     1501 gacgcgccca ccatcgggca gccgccggcc atcgcgatcg atccgctgaa ggacctgctc
     1561 accctgcccg cggtggtcgc gcacgaggcg aagaaccccc tctccggcgc ccgggcgggg
     1621 ctgcagctga ccatggagtc gctgggacgc
//
LOCUS       DATIFF010000206         1691 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_336949, whole genome shotgun sequence.
ACCESSION   DATIFF010000206 DATIFF010000000
VERSION     DATIFF010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_336949"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..746)
                     /locus_tag="VLD58_03070"
     CDS             complement(<1..746)
                     /locus_tag="VLD58_03070"
                     /inference="COORDINATES: protein motif:HMM:NF024627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HSB53303.1"
                     /translation="MICGLLLGALLAGGGPADTLRLGPGVHPGPLLITRPTVVLGAPG
                     AVVRGTGQGSVVVITAPGTVLRGLTIEHGGRDLDRDDAGIMVRADSVTLEDLRIRDML
                     FGIYLRKVRDVTIRRVDIEGPHGLAESRTGNGIHLYYSRAVRIAGSRIAWVRDGIYFE
                     YTDSARVTDNRVTHVRFGLHYMFSHFNRFERNIFTRSAAGAVVMNSNGLVIEDNVFAW
                     NAGSRSFGLVLQTATEPTVTGNVFAGNGIGT"
     gene            complement(743..1390)
                     /locus_tag="VLD58_03075"
     CDS             complement(743..1390)
                     /locus_tag="VLD58_03075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53304.1"
                     /translation="MSLLTWLDQPLSPRARLSIAGAGVLLVLAIFQPLWQITMFAQMF
                     PEGIRMWIYPFQLVGGNGGADLQGINILNHYIGMREIAAADFPEMKFIPFALGFFVLL
                     GFRVAVFGRVHQAVDSLVLFGYFGLFSLATFYYRMYSFGHQLSPEAPIKVAPFTPPVF
                     GHQHIANFDVYSYPGPATYLLTAYALTLTVTLALSARRLRSRAESTAPVGAPAVA"
     gene            complement(1400..>1691)
                     /locus_tag="VLD58_03080"
     CDS             complement(1400..>1691)
                     /locus_tag="VLD58_03080"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HSB53305.1"
                     /translation="SYFSPGEIEVQQGDSVTIHLTNGEQERDMLHGLGIAGYNINVVA
                     DPGETKTIRFKADKPGVWPFYCTNFCSAMHQEMQGYLLVKPTGAAGAAVASK"
BASE COUNT          284 a          563 c          594 g          250 t
ORIGIN      
        1 gtcccgatgc cgtttccggc gaagacgttg ccggtgacgg tgggctcggt cgcggtctgg
       61 agcaccagcc cgaacgaccg cgagcccgcg ttccaggcga acacgttgtc ctcgatcacc
      121 agcccgttgg agttcatcac caccgcgccc gccgcgctcc gggtgaagat gttccgctcg
      181 aaccggttga agtggctgaa catgtagtgc agcccgaagc gcacgtgggt cacccggttg
      241 tcggtgaccc gggcgctgtc ggtgtactcg aaatagatcc cgtcgcggac ccaggcgatc
      301 cggctgccgg cgatccgcac cgcgcgggaa tagtagagat ggatgccgtt gccggtccgg
      361 ctctcggcga ggccgtgggg tccctcgatg tccacccggc ggatggtcac atcgcgcacc
      421 ttccgcaggt agatcccgaa gagcatgtcg cggatccgga gatcctccag cgtcaccgag
      481 tcggcccgga ccatgatgcc ggcgtcgtcc cggtcgaggt cccgcccccc gtgctcgatc
      541 gtgagcccgc ggaggacggt gcccggcgcg gtgatgacca cgacgctccc ctgtccggtg
      601 ccgcgcacca ccgcccccgg cgcgccgagc acaacggtgg gccgggtaat gagcagcggg
      661 cccgggtgca ccccggggcc gagccgcagg gtgtcggccg gcccgccgcc ggccagcaat
      721 gcgccgagca ggaggccgca gatcacgcga ctgcgggtgc gcccaccggc gcggtggatt
      781 cggcgcgcga ccgcagccgc cgggcggaga gcgcgagcgt caccgtcagg gtcagcgcgt
      841 aggcggtcag gagataggtg gccgggcccg gatagctgta cacgtcgaag ttggcgatgt
      901 gctggtgccc gaacaccggc ggcgtgaacg gcgccacctt gatcggcgcc tcggggctga
      961 gctggtgccc gaagctgtac atccggtaat agaacgtggc cagcgagaac agcccgaagt
     1021 agccgaacag caccaggctg tccaccgcct ggtgcactcg cccgaacacc gccacccgga
     1081 agcccagcag cacgaagaag ccgagggcga aggggatgaa cttcatctcc gggaaatcgg
     1141 ccgccgcgat ctcccgcatc ccgatgtagt ggttgaggat gttgatcccc tggaggtcgg
     1201 cgccgccgtt cccgcccacc agctggaagg gatagatcca catccggatc ccctccggaa
     1261 acatctgggc gaacatcgtg atctgccaca gcggctggaa gatcgcgagg accagcagga
     1321 cgcccgcccc ggcgatgctc agccgggcgc ggggggaaag aggttggtcc agccaggtca
     1381 gcagagacat gggatcagct cacttcgacg cgacggcggc gccggcggcc ccggtcggct
     1441 tgaccaggag atacccctgc atctcctggt gcatcgcgga gcagaagttg gtgcagtaga
     1501 acggccacac gcctggcttg tcggccttga accggatggt cttggtctcc cccgggtcgg
     1561 cgacgacgtt gatgttgtac ccggcgatgc cgagcccgtg gagcatgtcg cgctcctgct
     1621 cgccgttggt caggtggatg gtgacggagt caccctgctg cacctcgatc tccccggggg
     1681 agaagtagga g
//
LOCUS       DATIFF010000207         2982 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1721655, whole genome shotgun sequence.
ACCESSION   DATIFF010000207 DATIFF010000000
VERSION     DATIFF010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2982)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2982)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2982
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1721655"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1049
                     /locus_tag="VLD58_03085"
     CDS             <1..1049
                     /locus_tag="VLD58_03085"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HSB53306.1"
                     /translation="EFTHATRASLAVGYQPLYDDRPERSGDPLVVAPWIEYGSGDGSI
                     VSTAGDMGLYLTMLLNQGRGPQGAVLPESRLAQMLQPHVTTARGGARYGYGMFLSELD
                     GRPVFFHTGGMLGYSSMLIGEPSLGIGAVAFVNGPGDPGQAARFALRALGAAMRGDSL
                     PEIPVDDRDRVEHAERYAGKFISPAGDTLAFEGIGDSLFLVSGATRTALVPYGDGAFL
                     GPRERFPLYPLRFAGDSTGMTEVWYGDQWYTGSRYQGPKSFTVPSAWKAYPGHYRIMQ
                     PWEPNFRVVLRKGALWYVGPSGDEEPLTPLPSGEFRVGDTDSAERLSFGNVVDGQALT
                     ATYSGMVYYRYFVE"
     gene            1267..2916
                     /locus_tag="VLD58_03090"
     CDS             1267..2916
                     /locus_tag="VLD58_03090"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047420 - N-acyl-D-amino-acid deacylase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacylase"
                     /protein_id="HSB53307.1"
                     /translation="MNRSAILALALLSACSGPTYDVVIRHGTVYDGTGAPGEVTDLAI
                     AGDSIAAIGDLGRARGKIDIDATGLAVAPGFINMLSWATEGLMVDGRSQSDIRQGVTL
                     EVFGEGESMGPLSDAMKQEMKEGQGDITYDITWTTLNEYLEMLAKKGISPNVASFVGA
                     ATVRQHVLGHDSRAATPEELGQMQELVRSAMREGALGVGSSLIYEPGMFATTEELTAL
                     ARTAAEEGGMYISHIRNENDSLLDALDEFLAIARNSGARAEIYHIKAAGKANWGKLDE
                     MLRRVESARAAGEAITADMYTYPASATGLDAIMPGWIRAGGFPEWKKRLQDPSMRKKL
                     LAEWKRAGGAFVGPGGPEGVLLVGFKNDSLKPLTGKTLKAVAAMRGKSAEETAMDLVV
                     QDNSRIECIYFTMSEDNLRKEIALPWVSFASDAGSYSPEGVFLKSNPHPRAYGTFARV
                     LAKYVRDDKVITLSDAIHRLAGLPAENLRLQRRGELTPGFYADVVVFDPAKIQDHATF
                     DQPHQFATGVKDVFVNGAQVLKDGEHTGAKPGRVVRGPGVR"
BASE COUNT          512 a          958 c         1050 g          462 t
ORIGIN      
        1 ccgagttcac ccatgcgact cgtgcgagtc tcgcggtggg ctatcagccg ctctacgacg
       61 accggccgga gcggagcggc gatccgctgg tggtcgcgcc ctggatcgag tatggctcgg
      121 gcgatgggtc gattgtctcg accgcgggcg acatggggct gtatctcacg atgctgctca
      181 accaggggcg cggcccgcag ggtgcggtgc tccccgagtc gcgcctcgcg cagatgctgc
      241 agccgcatgt caccaccgcc cgcggcggcg cccgctacgg gtacggcatg ttcctgagcg
      301 aactcgatgg ccggccggtc ttctttcaca ccggcgggat gctgggctac agcagcatgc
      361 tcatcggcga gccgagcctc ggcatcgggg cggtagcgtt cgtcaacggc cccggagatc
      421 cgggccaggc ggcgcggttc gcgctgcggg cactgggcgc ggccatgcgg ggggacagcc
      481 tgccggagat tccggtggat gaccgggacc gggtggagca cgcggagcgc tacgccggga
      541 agttcatctc gccggcgggc gatacgctcg cgttcgaggg aatcggagac tcgctgttcc
      601 tcgtgagcgg cgccactcgc accgcgctcg ttccctatgg agatggcgcc ttcctcggcc
      661 cgcgcgaaag gttcccgctc tatccccttc gtttcgcggg cgattcgacc ggcatgaccg
      721 aggtctggta cggtgatcag tggtacaccg gatcgcggta ccaggggccg aagagcttca
      781 ccgtgccgag tgcgtggaag gcatatcccg gtcactaccg gatcatgcag ccgtgggagc
      841 cgaacttccg ggtggtgctg cggaaaggtg cgctctggta cgtcggcccg tcgggcgatg
      901 aggagccgct gactcctctc cctagcggag agttccgggt cggcgacacc gattcggcgg
      961 agcggctcag cttcggcaat gtggtcgacg gccaggcgct gacggcgaca tactcgggga
     1021 tggtgtacta ccggtatttc gtggagtgag aggcggcaag gcggcaaggc ggcaaggcgg
     1081 caaggcgggc gaagatggct acgatgacgc ccgagggtcg agggagtcgg cggggtcgtg
     1141 gggagcagcc cgtgcgccgc tcggcgatcc cttcggtccc ttgcggccac gaggctgcga
     1201 cgccacgacc acgccgatct ccctgtcccg gctgtctcgg atgacaacca atcaaccggc
     1261 acaccaatga atcgctccgc aatcctcgcc ctcgcgctgc tcagcgcctg ttccggaccg
     1321 acctacgacg tggtcatccg gcacggcacc gtgtacgacg gcaccggcgc gccgggcgag
     1381 gtcaccgacc tggccattgc cggggacagc atcgccgcga tcggcgatct cggccgcgcc
     1441 aggggaaaga tcgacatcga cgccaccggc ctcgcggtgg cgcccgggtt catcaacatg
     1501 ctgagctggg ccaccgaagg cctcatggtc gacggccgct cccagagcga catccgccag
     1561 ggcgtcaccc tcgaggtctt cggcgagggc gagtcgatgg gtccgctctc tgacgcgatg
     1621 aagcaggaga tgaaggaggg ccagggcgac atcacttacg acattacctg gaccacgctc
     1681 aacgaatacc tcgagatgct ggcgaagaag ggcatctcgc ccaacgtcgc ctcctttgtc
     1741 ggcgccgcga ccgtgcgcca gcatgtgctc ggccacgact ctcgcgccgc caccccggag
     1801 gaactggggc agatgcagga gctggtgcgg agcgcgatgc gtgaaggggc gctgggggtg
     1861 ggttcgtcgc tgatctacga gccggggatg ttcgccacga ccgaggagct gaccgcgctg
     1921 gcccgcaccg ccgcggaaga aggcgggatg tacatctccc acatccggaa cgagaacgac
     1981 tcgctgctcg acgcgctgga cgagttcctg gccatcgcca ggaactccgg cgcccgggcg
     2041 gagatctacc atatcaaggc ggccggcaag gccaactggg gcaaactgga cgagatgctc
     2101 cgccgagtgg agtcggcgcg ggccgccggt gaggcgatca ccgcggacat gtacacctat
     2161 cccgcgagcg caaccggcct cgacgcgatc atgccggggt ggatccgggc cgggggattc
     2221 cccgagtgga agaagcggct ccaggatccc tctatgcgca agaagctcct ggccgagtgg
     2281 aaacgcgccg gcggcgcctt tgtcggaccg ggcggccccg agggagtgct gctggtcggg
     2341 ttcaagaacg actcgctcaa gcccctcacc gggaagacgc tcaaggccgt cgccgcaatg
     2401 cgggggaaga gcgccgagga gacggcgatg gacctggtgg tgcaggacaa cagccggatc
     2461 gaatgcatct acttcacgat gtcggaggac aatctcagga aggagatcgc gctcccgtgg
     2521 gtgagttttg cctccgacgc cggctcctac tcacccgagg gcgttttcct caagtcgaat
     2581 ccccatcccc gtgcctacgg cacctttgcc cgggtcctcg ccaagtatgt gcgggacgac
     2641 aaggtcatca ccctctccga cgcgattcac cgcctggccg ggctcccggc cgagaacctg
     2701 cggctccagc gccgagggga gctgaccccg gggttctatg ccgacgtggt ggtcttcgat
     2761 ccggcgaaga tccaggacca cgccaccttc gaccagccgc accagttcgc caccggtgtg
     2821 aaggatgtct tcgtgaacgg ggcgcaggtg ctcaaggatg gagagcacac gggtgccaag
     2881 ccggggcgag tggtcagggg gccgggggtg aggtgagaag tgagaagcaa gaagtgagaa
     2941 gtaagaaggg aggagacccc ctcccatctc ccacctctct tc
//
LOCUS       DATIFF010000208         2070 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2030251, whole genome shotgun sequence.
ACCESSION   DATIFF010000208 DATIFF010000000
VERSION     DATIFF010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2070
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2030251"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..1685)
                     /locus_tag="VLD58_03095"
     CDS             complement(126..1685)
                     /locus_tag="VLD58_03095"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing SpoIIE family protein
                     phosphatase"
                     /protein_id="HSB53308.1"
                     /translation="MADALGALAGARVRLWRFDGRSLRAFGSAGDPGFTPPIPLNAGL
                     VPTPMGGVWLAPVLEADGFWVEIGSVSEARAAELSPQLTSVVGAFLAAERETAAVTDE
                     LTGRYEEIDLLYAISEILGRTVRLEEAAHTIVREVADVVGARRASIMVYDDETGLLRT
                     VAARGFQAEGLAPVRTDDPFSVAARVFREQRIIVHDPADPMPHPPGPADPRSYRGQAF
                     LSIPICYAAPGASSRCVGVINLTDRLAGDTFTPSEAKLVSAVANQIGAAIENARLVAR
                     DLRRQRLQRELELAHDLQLKLLPAPGVLQNDAEVAAICRPVDSVGGDFYTFTRLGLGR
                     VGVMLGDVSSHGFSAALVMALVMSAAGIHAGAGSTPDEVLASMLESLGTELASTEMFL
                     SVFYGVLDPRGGRLTYASAGHQHAFRIPRVGGPERLPATAPPLGLSTTQSIQRRQVAW
                     HPGGDLLCLWTDGLVDQGATGAFTEERLLAELASRRTQSPEAIVNAIFAQADEASARP
                     VDDRTLLVMRV"
     gene            complement(1700..>2070)
                     /locus_tag="VLD58_03100"
     CDS             complement(1700..>2070)
                     /locus_tag="VLD58_03100"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB53309.1"
                     /translation="CIEEVVDLLMRHCCADDSWLCRRRRFNLRVAVAEALANAIVAGN
                     QEDRSKWVEVQAELCGDHIRIEVTDQGCGFDPLQIAPPLLPEELDRPNGRGLFLIRHL
                     VDDVRFNAQGNSICMTLRRH"
BASE COUNT          320 a          696 c          749 g          305 t
ORIGIN      
        1 tggtcgtcga cccggccctc cggtgccgct ccggattgat ggttgcggcg atgataggca
       61 gtatcactgc gggcctttct gttccccttc tcttctgctc tcccctgctc ccctgctccg
      121 cccgctcaca ccctcatcac cagcaacgtc cggtcatcca ccggccgggc gctggcctca
      181 tcggcctggg cgaagatggc gttcacgatg gcctcggggc tttgcgtccg tcggctggcc
      241 agttccgcca gcagccgttc ctcggtgaag gcgccggtgg cgccctggtc tacgagaccg
      301 tcggtccaga ggcacagcag gtcgccaccc gggtgccacg cgacctggcg gcgctggatg
      361 ctctgagtag tcgagagccc aaggggaggc gcggtggccg ggagtcgctc cgggccgccg
      421 acacggggga tccggaacgc gtgctggtgg cccgcgctgg cgtaggttag ccggccgccg
      481 cggggatcca ggactccgta gaagacagag aggaacattt cggtggaggc gagctcggtg
      541 ccgaggctct cgagcatcga ggcgagcacc tcgtccggag tgctgccggc ccccgcatgg
      601 atgccggcgg cggacatgac cagcgccatg acgagggcag cggagaatcc gtgggaggag
      661 acatccccca gcatgactcc aacccggccg aggcccaggc gggtgaaggt gtagaaatcc
      721 ccgcccacgc tgtccaccgg ccgacagatg gcggccacct cggcgtcgtt ctgcagcacg
      781 ccgggtgcgg ggagcagctt gagctggagg tcgtgggcca gctcgagctc ccgctgcagc
      841 cgctggcggc ggaggtcacg ggccaccagc cgggcgttct cgatggccgc cccgatctgg
      901 ttggccaccg cggagaccag cttggcctcg gagggggtga aggtgtcgcc cgcgaggcga
      961 tccgtcaggt tgatgacccc gacgcagcgg gagctggcgc ccggcgcggc atagcagatc
     1021 ggtatgctca ggaaggcctg tccgcggtag ctccggggat cggcagggcc ggggggatgg
     1081 ggcatcgggt cggcgggatc gtggacgatg atccgctgct cccggaacac ccgggccgcg
     1141 acagagaagg ggtcatcggt gcggaccgga gccagccctt cggcctggaa tccgcgggcg
     1201 gcgacggtcc tgagcaggcc ggtctcgtcg tcgtacacca tgatcgacgc ccggcgggcg
     1261 ccgaccacgt cggccacttc gcgtacgatg gtatgggccg cctcttccag ccggacggtg
     1321 cggcccagga tctcgctgat ggcgtagagg agatctatct cctcataccg gccggtgagc
     1381 tcgtcggtga cggcggcggt ttcccgttcg gccgcgagga aggcgcccac gacgctcgtg
     1441 agctgggggg agagctccgc cgcccgcgcc tcgctcacgc ttccaatctc aacccagaac
     1501 ccgtcggcct cgaggaccgg cgccagccac acgccgccca tgggagtcgg caccaggccg
     1561 gcattgaggg ggatgggagg agtaaaaccg ggatcacccg ccgagccaaa ggcgcggagg
     1621 ctccggccgt cgaagcgcca aaggcggacg cgggcgcctg cgagagcgcc cagcgcgtcc
     1681 gccactgact cgagaccggt cagtggcggc gcagcgtcat gcagatggaa ttcccttgtg
     1741 cgttgaagcg aacgtcatcc accaggtggc ggatcaggaa gagcccacgg ccattgggcc
     1801 ggtccagctc ctcgggcaac agcgggggtg cgatctgcag gggatcgaag ccgcagccct
     1861 ggtcagtgac ctcgatgcgg atgtggtcgc cgcagagctc cgcctgcact tccacccact
     1921 tggagcgatc ctcctggttc cccgcgacga tcgcgttggc cagggcctcc gcgaccgcga
     1981 cccgcaggtt gaaccggcgg cggcggcaga gccagctgtc gtcggcacag cagtggcgca
     2041 tgagcaggtc caccacctcc tcgatgcagg
//
LOCUS       DATIFF010000209         2402 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1876038, whole genome shotgun sequence.
ACCESSION   DATIFF010000209 DATIFF010000000
VERSION     DATIFF010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2402
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1876038"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..723
                     /locus_tag="VLD58_03105"
     CDS             <1..723
                     /locus_tag="VLD58_03105"
                     /inference="COORDINATES: protein motif:HMM:NF017085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAD domain-containing protein"
                     /protein_id="HSB53310.1"
                     /translation="EPGSTDVLRAELKWLGGVLAEARDAQVMRERLSRLLDTQPVELV
                     LGPVARRIDDEMDARFKSGRADADIALGSERYFRLLDQLDALCAAPGFADAAGRPVRR
                     ELPRLLQADLNRVRKRHRAVVAADTPEARSLALHEVRKAAKRLRYAAETAQPVFGKRA
                     KRLAARAEAIQEVLGEHQDTVVARATLREIGIRAHLAGENGFTFGRLHALEEARAEEL
                     VRGYPPLMKQLPARKLKVWLEH"
     gene            832..1176
                     /locus_tag="VLD58_03110"
     CDS             832..1176
                     /locus_tag="VLD58_03110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53311.1"
                     /translation="MSSEDRIQELEARISMLQAKLDELNKQLAQAEIDRWQGRIEDLE
                     LQMHLGAMETTDRMKELLDQLHRRWAAVKVQLESTASAATEGADAVRASLQTAYRDIR
                     QALLDTKNKIRS"
     gene            complement(1190..1993)
                     /locus_tag="VLD58_03115"
     CDS             complement(1190..1993)
                     /locus_tag="VLD58_03115"
                     /inference="COORDINATES: protein motif:HMM:NF027645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54 modulation/S30EA ribosomal C-terminal
                     domain-containing protein"
                     /protein_id="HSB53312.1"
                     /translation="MTRQQLPATGDIQVTTEGPMPDGTVDYTRDKIRALIHLAPGPVL
                     SARARVSRHGDPAVPRPVVAQANLDVNGRLVRAQADGETALQAVDRLEARLRSRLQRI
                     DADWEARRGSVPSHEPHEWRHQSERARRDRWYPRPEDEREIVRRKSFTLHRCTIDDAA
                     RDMGQLDYDFHLFIEAGTGQDTVLYRAGETGYRLAQVTPPRPHELAAFRLPVTVSPHP
                     AVRLTIGEAVNRLNLLALPFLFFVDNDLDRGAVLYHRYDGHYGLISPAD"
BASE COUNT          365 a          815 c          856 g          366 t
ORIGIN      
        1 gagcccggga gcaccgacgt cctacgtgcg gagctgaagt ggctcggcgg cgtgctggcc
       61 gaggcccggg atgcccaggt gatgcgggaa cggctcagcc ggctgctgga cacccagccg
      121 gtcgagctgg tgctcggtcc ggtcgctcgg cgcatcgatg acgagatgga cgcgcggttc
      181 aagtcaggcc gggccgatgc cgacatcgct ctgggcagcg agcggtactt ccggctgctg
      241 gaccagctgg acgccctctg cgccgccccc ggcttcgccg acgcggccgg ccggccggta
      301 cgtcgcgagc tgccccgtct gctgcaggcc gacctgaacc gcgtcaggaa gcggcaccgt
      361 gcggtggtgg cagcagacac acccgaggcg cggagcctcg ccctgcacga ggtccgcaag
      421 gcagccaagc ggctccgtta tgcagcggag acggcccagc cggtgttcgg caagcgagcc
      481 aagcggctgg ctgctagggc cgaggccatc caggaggtgc tcggcgagca ccaggacacc
      541 gtggtcgccc gcgccaccct ccgcgagatc ggcatccgcg ctcatctcgc cggcgagaac
      601 ggcttcacct tcggtcggct acacgccctc gaggaggccc gagccgagga gctcgtgcgg
      661 ggctacccac cgctgatgaa gcagcttccc gcgcgcaagc tcaaggtctg gctggagcac
      721 tgagacgccg caccgcccgt ccggatcggc cacgtcccgg cccggtggtc gcgcgggacg
      781 ccgggacctt ggcccctggt tcggctctcg cttcggtgtg acgctgtgcc aatgtcatcc
      841 gaagatcgca tccaggagct ggaggcccgg atcagcatgc tgcaggccaa gctggatgag
      901 ctgaacaagc agctcgccca ggccgagatc gaccgctggc aaggacgcat cgaggacctc
      961 gagctccaga tgcacctcgg cgccatggag accaccgaca ggatgaagga gctcctcgac
     1021 cagctccacc gccggtgggc ggccgtcaag gtccagctcg agagcaccgc ctcggcggcg
     1081 accgagggtg ccgacgccgt acgcgccagc ctccagaccg cctaccggga catccgacag
     1141 gcactcctcg acaccaagaa caagatcagg tcctgaccgt ttgccgcgcc tagtctgccg
     1201 ggctgatcag cccgtagtgg ccgtcgtagc ggtggtagag cacagccccc cggtcgaggt
     1261 cgttgtcgac gaagaacagg aacggcaaag cgagcaggtt gagccggttc accgcctcgc
     1321 cgatggtgag ccggaccgcc ggatgcgggc tgacggtcac cgggagccgg aaggctgcga
     1381 gctcatgcgg ccggggcggc gtcacctgtg cgaggcggta gccggtctcg cccgcccggt
     1441 agaggacggt gtcctggccg gtgccggcct cgatgaacag gtgaaagtcg tagtcgagct
     1501 ggcccatgtc tcgagccgcg tcgtcgatgg tgcagcgatg cagggtgaag gacttgcgcc
     1561 ggactatctc ccgttcgtcc tcggggcgcg gataccagcg gtcacggcgg gcgcgttctg
     1621 actggtgccg ccactcgtgc ggctcatggg agggcaccga tccccgccgg gcctcccagt
     1681 cggcgtcgat gcgttgcagc cggctgcgca accgggcctc gagccggtcg acggcctgca
     1741 gggcggtctc tccgtcagcc tgggcacgga ccagccgacc gttcacgtcg aggttggcct
     1801 gggccaccac cgggcgaggc accgcgggat cgccgtggcg gctcacccgc gcccgcgcgg
     1861 acagcaccgg ccccggagcg aggtgaatca gcgcacggat cttgtctcgg gtgtagtcaa
     1921 ccgttccgtc gggcatcggc ccctcggtgg tcacctggat gtcgcccgtc gccggaagct
     1981 gctgtctggt cacggtccac cttcctgatc accggccctc aggcttcgtg atcccagcct
     2041 tcgctcctgg gcgacgtgcg gctagggcag aacgtcccaa agaagtgggg ccgggcacgt
     2101 tgcagtgtct ttcgcccctt gtccgtcgcg ggtgttcggt ggtgcgctcg ctgtgtgagg
     2161 tgttcaggcg agctgccgcg cagaacgcgt ccggcagagc ccgtctgggc acggcgagtg
     2221 gtcggtcatg ggcggtcagg gacatgagtg aacagccaag gaagcgggcg tctctcgcga
     2281 cgagtggtct tccggcaacg agccgccgag acaccccgtt cggtatgggt gtgcccctgg
     2341 gacagttcgc gggaattccc gttcgcgcgc actggtcggt cctgctggca cttgtcctgt
     2401 tc
//
LOCUS       DATIFF010000210         2438 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1107348, whole genome shotgun sequence.
ACCESSION   DATIFF010000210 DATIFF010000000
VERSION     DATIFF010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2438)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2438)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2438
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1107348"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2344
                     /locus_tag="VLD58_03120"
     CDS             <1..2344
                     /locus_tag="VLD58_03120"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB53313.1"
                     /translation="VDEVWQELVFPVYRVGEEVQDGLRRPLGRGLLEEVWRSGRTQFF
                     PSNASEEAARLGLNLDRVARCIAGAPLRTRGTVTGFIAIEDDHQDHAFEPEDVRILEI
                     VAQQLGVTLENLESLEEERRQRITAEWLRQMARAATDPAARPMQVFELAADAAYQGIG
                     GISTSVTFLPGDGSRTLVASRGQDTHPVSDSFPVAGSVAAWMQEELGAVFISARLDRD
                     PRIGPDPLRSNTAIALAAVPIWSDNRIVAVLELVRPPGVSFAVAEVERLAQIADHAGA
                     GYQTAKAGAALRESEERYRRLFSAATDAIVTLDRQGMITSFNEAAEALWNVRAAEVVG
                     NRWDKVLSFESPVMVAEQIARALTGESGSFEAWIRRHDAERCVVAMSFSPLVEDGSTT
                     AVLGIVRDVSEQRRVQSQLLQAEKMSAIGQLVGGMAHEINNPLASILVNMELLLSEAK
                     DPSQLETLTAIKTETDRAAQIVRNLLTYVRGQGSARTVLDLRDAVRGAVALRRNQLLN
                     SQISVEVHLPAEPVLVSGNKVNLQQVLMNLLMNAEQAIRAHRGRGSLWVRLVVNDGLG
                     VITVDDDGPGIPPEMLSRIFDPFYTTKPEGEGTGLGLSVTAGIVADHHGRISAAERPG
                     GGARFTVELPLHEGGPRVIPEEPVRPILAPSDAAQRGRILLLDDEPDIRRSVSRFLIK
                     TGWQVDLADSGEEGLRLLGQGEYAVVLCDLRMPGMSGHEFYRRLQAQGSPAVDHLVFM
                     TGDVLSPEASRFLQEAARPVLSKPFTLNDLTEVLGQVVPG"
BASE COUNT          378 a          855 c          836 g          369 t
ORIGIN      
        1 ggtcgacgag gtgtggcagg agctggtctt cccggtgtac cgcgtgggcg aggaggtcca
       61 ggacggcctc cgccggccgc tcggccgcgg gctgctcgag gaagtgtggc gtagcgggcg
      121 gacccagttc tttccgagca acgcgagtga ggaagccgcc agactcggcc tgaacctcga
      181 tcgcgtggcc cgctgcatcg ccggagcgcc gctccgcacc cgcggcacgg tgaccggctt
      241 catcgccatc gaggacgacc atcaggacca cgccttcgag cccgaagacg tccgcatcct
      301 cgagatcgtt gcccagcagc tcggcgtcac gctcgaaaat ctcgaaagcc tcgaggagga
      361 gcgccgccag cggatcacgg cggagtggct ccgccagatg gcccgcgcgg ccaccgatcc
      421 cgccgcccgg ccgatgcagg tcttcgagct cgccgccgat gcggcgtacc agggcatcgg
      481 cgggatctcg accagcgtca ccttccttcc gggcgacggc agccgcacgc tggtcgcctc
      541 ccgcggccag gatacccatc ccgtgagcga cagcttcccg gtggcagggt cggtcgccgc
      601 ctggatgcag gaagagctgg gggccgtctt catcagcgcg cggctcgatc gcgatccccg
      661 catcggcccc gatccgctgc gctccaacac cgcgatcgcc ctggcggccg tcccgatctg
      721 gtccgacaac cggatcgtgg ccgtgctcga gctggttcgc cctccgggtg tgtcgttcgc
      781 ggtggccgaa gtcgagcggc tggcccagat cgccgatcac gccggggcag ggtaccagac
      841 ggccaaggcc ggcgccgccc ttcgcgagtc cgaggagcgc taccgccggc tcttctccgc
      901 ggcgaccgac gcgatcgtca cgctggaccg tcagggaatg atcacgtcgt tcaacgaggc
      961 cgccgaggcg ctctggaatg tccgcgccgc cgaggtggtg ggaaatcgct gggacaaggt
     1021 gctgtcgttc gaatcgccgg tgatggtggc ggagcagatc gcccgggccc tgaccggaga
     1081 atcaggatcc ttcgaggcgt ggatccgccg gcacgacgcg gaacggtgtg tcgtggcgat
     1141 gagcttctcg ccgctggtcg aggatggcag taccaccgcg gtgctcggca tcgtgcgcga
     1201 cgtgagcgag cagcgccggg tccagtcgca actgcttcag gccgaaaaga tgtcggccat
     1261 cggccagctg gtgggcggca tggcccacga gatcaacaac ccgctggcga gtatcctggt
     1321 caacatggag ctcctgctga gcgaggcgaa ggacccctcc cagctcgaga ccctcaccgc
     1381 gatcaagacc gagaccgacc gcgccgccca gatcgtccgc aacctcctta cctacgtgcg
     1441 gggccagggc tcggcccgga cagtgctcga cctgcgcgac gcggtgcggg gcgcggtggc
     1501 gctccgccgg aaccagctcc tcaatagtca gatctcggtc gaagtgcacc tgccggcgga
     1561 gccggtgctg gtctccggca acaaggtgaa tctccagcag gtgctcatga acctgctgat
     1621 gaatgccgaa caggcgatcc gggcacaccg ggggagaggc tcgctctggg tccggctggt
     1681 cgtcaacgac gggctcggcg tcatcacggt cgatgacgat gggccgggca ttcccccgga
     1741 gatgctgagc cggatcttcg atccgttcta taccaccaag cccgagggcg agggaaccgg
     1801 gctggggctg tcggtgaccg ccggcatcgt ggcggaccac catggccgga tctccgccgc
     1861 cgaacggccc gggggcggcg cccgcttcac ggtggaattg ccgctccatg aaggcgggcc
     1921 gcgcgtgatt cccgaagaac cggtccgtcc catcctcgcg ccttccgacg ccgcccagcg
     1981 gggccggatc ctcctgctcg acgacgagcc cgacatccgc cgcagcgtgt cccgcttcct
     2041 catcaagacc ggctggcagg tggacctcgc cgactccggc gaggaaggac tgcgcctgct
     2101 gggccagggc gagtacgccg tggtgctctg cgacctccgg atgccgggca tgagcgggca
     2161 cgagttctat cgccggctcc aggcgcaggg ctctcccgcc gtggaccacc tcgtcttcat
     2221 gaccggcgac gtgctctcgc ccgaagcctc gcgattcctc caggaggcgg cccgcccggt
     2281 gctctccaag ccgttcacgc tgaacgacct caccgaagtg ctggggcagg tggtcccggg
     2341 atagctccac gggcgcgtcc gctatctttg gggatgcccg cacccatcct cgtcctcgtg
     2401 gcgccgcagg acatcgtcaa catcggcagc gcagtccg
//
LOCUS       DATIFF010000211         2565 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1722171, whole genome shotgun sequence.
ACCESSION   DATIFF010000211 DATIFF010000000
VERSION     DATIFF010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2565
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1722171"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..695)
                     /locus_tag="VLD58_03125"
     CDS             complement(<1..695)
                     /locus_tag="VLD58_03125"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB53314.1"
                     /translation="MKILVLAPHPFFQARGTPLAVRQVLEFLGERGHEVDLLTFHEGE
                     DVGIPRCRIHRIPRLPGVRNVRPGFSAKKVACDAVMLVECLRMVRRVRYDLIHAVEES
                     AFIAVAAHAIAGVPYVYDMDSSLADQMVERYPSLRFALPVMRYCEGIAVRRSLGVLTV
                     CAALQDLALKHDPAKSVGRVEDSTLLPTGPSDGSDGALPATVRRSGPIAMYVGNLERY
                     QGIDLLLDSFHHVL"
     gene            complement(1346..2335)
                     /locus_tag="VLD58_03130"
     CDS             complement(1346..2335)
                     /locus_tag="VLD58_03130"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB53315.1"
                     /translation="MTAEGTIMEPIAERVATTGRADIRLVSVVVPVVERMDDLLTLYR
                     SFAGELDRRGEEHEFLFVFDGGFAPPPALADLSRENGAIRLLSFARTFGETAALRLGI
                     ERSRGDVIVTLPAYFQVQAEGMGPLLDALQDGADMAVANRYPRVDSWINRLQSFAFHS
                     VIGGLVDRRFHDIACGVRVIRRPVAEALPLYGDLHRFIPALALREGYRVDEVPVPQHP
                     NDARIRVYGPGVYLRRLLDIAAFFFLAKFTEKPLRFFGLVGSVFFGLGAATGLALLVQ
                     RLAGQGIANRPLLLLAVLLIALGVQLMGLGLVGEIIVHLRAPHRRAYRVRERV"
     gene            complement(2338..>2565)
                     /locus_tag="VLD58_03135"
     CDS             complement(2338..>2565)
                     /locus_tag="VLD58_03135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53316.1"
                     /translation="AAVPMVAAAVLFGIFWIYATTHFRVDKAEALVFPGAALLWLGAA
                     FYLAMLGLVAEVALSSERESARTIPTAWEVR"
BASE COUNT          430 a          887 c          891 g          357 t
ORIGIN      
        1 agtacatggt ggaagctatc gagcaacagg tcgatgccct ggtaccgttc caggttgccc
       61 acgtacatgg cgatcggccc cgatcgccgg accgtggcgg gcagggcgcc gtcgctgccg
      121 tccgacggac cggtgggcag cagggtgctg tcctcgactc ggcccaccga cttcgcggga
      181 tcgtgcttca gagccaggtc ctgcagggcg gcgcagacgg tcagcacgcc gagactccgg
      241 cgcacggcga ttccctcgca atagcgcatc acgggtaggg cgaagcgcag cgagggatac
      301 cgttccacca tttgatccgc cagcgaggaa tccatgtcgt agacatacgg cacgccggcg
      361 atcgcatggg ccgccacggc gatgaaggcc gactcttcca cggcgtggat caggtcgtac
      421 cggacacgac ggaccattct caggcattcg accagcatca ccgcgtcgca ggcgaccttc
      481 ttcgccgaga agccgggccg gacgttccgg actcctggca ggcggggaat gcggtggatc
      541 cggcaccgag ggatccccac atcctcgccc tcgtggaagg tgaggaggtc cacctcgtgg
      601 ccccgctcgc ccaggaattc gagcacctgc cgcacagcca gcggcgtgcc ccgcgcctgg
      661 aagaaaggat gcggggcaag caccaggatc ttcacgccgt gggccccagg ctctgggcct
      721 gaccgcggaa ctctcgcacc acgtcttcga tttccacctc cggccgtccg ccgcgccccg
      781 ggcgggtcgt cttgcgccgc acggcgaatc cggcgttgaa ctatgtctcg gtcaggccag
      841 ctccacccgt tcctgcgcgg ccccgcaggg gctgcgggga agcctagggg gcggcgaccc
      901 caatagttac ctgggacacc ccactcgcac tgtgcgccag gatacgttcc cgggcgccgg
      961 cgcggtgggc ggccgccccc ctggcgggca gtcaccccga cctcatggcg gggcggggca
     1021 tcccaagaca gcctcgcggc ctcgggcagt gcgacggcgc gatttcttgg acacgggggc
     1081 aggccgttca cggggggacg acgccgagtt cgagtcggcc ctgagatttc cagccggagg
     1141 tcggaccgtc gacgggttgg agcctcgaac agggtgccgc cgaagccgcc gcggccgatc
     1201 agcgccaggc gccgtgcggc tggctggcct tggaagcgat cccggcacgc cggcgcaggc
     1261 tgcgagtggc ccatcgggtg gtccgtcacg cgcggtccgg tcgcgtgcct gattgcctgg
     1321 gcacgttccg cgggcggcgg tagcttcaga ccctttcgcg cacgcggtac gcccgccggt
     1381 gcggcgcccg caggtgcacg atgatctcgc cgaccagccc cagtcccatc aactgcactc
     1441 ccagagcgat gagcagcacg gcaaggagga gcagtggccg attggcgatt ccctggccgg
     1501 cgagtcgctg gacgagcagg gccagcccgg ttgccgcccc cagcccgaaa aacaccgagc
     1561 ccacgagtcc gaagaaccgg agcggcttct cggtgaactt ggccaggaag aagaatgcgg
     1621 cgatgtcgag cagccggcgc agatagacgc cggggccgta gacccggatg cgcgcgtcgt
     1681 tggggtgctg ggggaccggc acctcgtcga cccggtagcc ctcgcgcagg gcgagggccg
     1741 gaatgaatcg gtgcaggtcg ccgtacaggg gaagcgcctc ggccacggga cggcggatga
     1801 cccgaacgcc gcatgcgata tcgtgaaagc ggcggtccac cagtccgccg attacgctgt
     1861 ggaacgcgaa tgactgaagc cggttgatcc agctgtccac ccgcggatag cggttggcca
     1921 ccgccatgtc ggcgccgtcc tgcagcgcgt ccaggagtgg gcccatgcct tctgcctgca
     1981 cctgaaagta ggccggcaga gtgacgatca catcgcctcg gctccgctcg atgccgaggc
     2041 ggagcgcggc ggtttcgcca aaggtgcgcg cgaagctcag cagtcggatc gcaccgttct
     2101 cgcggctcaa atcggccagg gccggcggcg gggcgaagcc gccatcgaac acgaagagga
     2161 actcgtgctc ctcgccacgg cggtcgagct cgccggcgaa cgaccggtac agcgtcagca
     2221 ggtcgtccat ccgctcgacc acggggacga ccaccgagac gagccggatg tcggcccgcc
     2281 ccgtcgttgc tacacgctcg gcgatcggct ccatgatggt gccctcggcg gtcatgatca
     2341 gcgcacctcc cacgcggtcg gaatcgtacg ggcgctctcg cgctcgctac tgagcgctac
     2401 ctcggcgacc agcccgagca tcgccaggta gaaggcggcg ccgagccaga gcagggcggc
     2461 ccccgggaac accagcgcct cggccttgtc cacgcggaaa tgcgttgtcg cgtagatcca
     2521 gaagatgccg aacagcacag cggccgcgac catcggcacc gcggc
//
LOCUS       DATIFF010000212         3056 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_645523, whole genome shotgun sequence.
ACCESSION   DATIFF010000212 DATIFF010000000
VERSION     DATIFF010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3056
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_645523"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..954)
                     /locus_tag="VLD58_03140"
     CDS             complement(<1..954)
                     /locus_tag="VLD58_03140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53317.1"
                     /translation="MRQARWSLLILAGVMGCAASKATPIGTPAPATGGTAHASSAERS
                     WSRAQYPSTYKRHPNPPVLIRNATIMTAAGPELAGASILFQDGKIVAVGANLTAPADA
                     TVIDGTGTFVTPGLIDTHSHIGVYSAPGTFAESDGNEATNPVTAQVWAEHSFWPQDPQ
                     IPLAIAGGVTVLQALPGSANLIGGRSATVRLVPARTVQEMKFPDAPYGMKMACGENPK
                     RVYQSRGPSTRMGNMAGYREAFIRAEQYRERWDTWLKDRKGNPPERDLQLETLADVLR
                     GKILVHNHCYRADEMAQMLDLAREFGFKIRSFHHVVEGYKVA"
     gene            complement(989..>3056)
                     /locus_tag="VLD58_03145"
     CDS             complement(989..>3056)
                     /locus_tag="VLD58_03145"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HSB53318.1"
                     /translation="TRLLAALVLIGAGPLAAQYPAEPPAPGVIAPFPLPAPREVLLPN
                     GLRLLVVEQPRQPVLSITLMTPAGSAFDPADKEGTSDILARLLTRGAGTRSAAQFAAA
                     IEAIGGSLGAVSDPDALSIQADVLSAHAATVLDLIGDMVLRPTLDTTELRTAQEVILG
                     TLTTEPSDGGALAGRVFLVGTYRQHPYARRPLPASVSQLTRADLESFRLARMRPSGSV
                     LVMAGDITVAEAQRLATKSLGAWKGLRPAPLAAQPPTAVPPTIYLIHRGGAQTAHIIV
                     GNTTFAGTDTSYYAAAVLNRILGEGGTSRLNRALNNERGWSLSTGAAFQRTAGLGLFQ
                     ASAEVPVQVGDSAVREILSQLAHLRTDLVPARELELARSSLSGEFPLRLQTMSQVAAA
                     VAQARTFGVPSTYITTYRARLEKVSAVTVRSVARRVFDPAKLTIVVAGDASRLYGRLS
                     KLGTVRIYAPNGRPLTEQDITPSAGPLSFQVADLKPRIDSMVIMAQGQPVGIQVAEIA
                     RAGDSVVYTERTALGPQLNQTTRLVFDSTGRMRRLDQTGKVRGQDTKIGLTYGAGRVK
                     GQAQVLDSLGRPKSIAVDTAVSATIVDDNALVALLPTLPWALNTRWTIPVFGSGENKV
                     RNIQLTVADIEQVTTPAGVFEAYRADMEGASQAVSFYVTTAAPHRLVRVSLIGSPIEF
                     LAINRQ"
BASE COUNT          471 a          993 c         1087 g          505 t
ORIGIN      
        1 ggccaccttg tagccctcca cgacgtgatg gaacgagcgg atcttgaacc cgaattcccg
       61 ggccaggtcc agcatctggg ccatctcgtc ggcccggtag cagtgattgt ggaccaggat
      121 cttcccgcgc agcacgtcgg ccagggtctc gagctggaga tcccgctccg gcggattgcc
      181 tttccggtcc ttgagccagg tgtcccaccg ttcccggtac tgctcggccc ggatgaatgc
      241 ctcgcgatat cccgccatgt tgcccatgcg ggtcgacggc ccgcggctct ggtagacccg
      301 cttgggattc tcgccgcacg ccatcttcat cccgtagggg gcgtcgggga acttcatctc
      361 ctgcaccgtc cgcgccggca ccagccggac cgtggccgac cggccaccga tcaggttggc
      421 agagccgggg agggcctgca gcacggtgac gcctccggcg attgcgagcg ggatctgcgg
      481 gtcctggggc cagaagctgt gctcggccca gacctgcgcg gtgaccgggt tggtcgcctc
      541 attgccatcg ctctcggcga acgttcccgg cgccgagtag accccgatgt ggctatgggt
      601 atcgatgagg cccggtgtca cgaacgtccc ggtgccgtcg atgaccgtgg catctgcggg
      661 ggcggtgaga ttggcgccca ccgccacgat cttcccgtcc tggaacagga tcgaagcgcc
      721 ggcaagctcc ggtccggcgg cggtcatgat cgtggcgttc cggatcagta ccggaggatt
      781 gggatggcgc ttgtaggtcg acggatactg cgcccggctc cagctccgtt ccgcgctgga
      841 ggcatgggca gtcccgcccg ttgccggagc cggggtgccg atgggtgtgg ccttgctggc
      901 cgcacaaccc atcacgccgg ccaggatcag gagggaccaa cgcgcttgtc gcatggcggt
      961 gggatccttt gaggtgaaga aagggtgact actgccggtt gattgccagg aattcgatcg
     1021 gggagccgat caggctcacc cggaccagcc ggtgcggcgc tgcggtcgtc acgtagaacg
     1081 acactgcctg gctcgcgcct tccatgtcgg cccggtaggc ctcgaatacg ccggcggggg
     1141 tggtgacctg ctcgatatcg gccaccgtaa gttgaatgtt ccgcaccttg ttttcgcccg
     1201 acccgaagac cgggatggtc caccgggtgt tgagcgccca tggaagggtc ggcaggagcg
     1261 ccaccagcgc gttgtcgtcc acgatcgtgg cgctcaccgc cgtgtctacc gcgatgctct
     1321 tcgggcggcc cagcgaatcg agtacctggg cctggccctt tacccgcccg gcgccgtagg
     1381 tgaggccgat cttcgtatcc tgtccccgta ccttgccggt ctgatccagc cgccgcatcc
     1441 ggccggttga atcgaacacc agccgggtgg tctggttgag ctggggaccg agcgcggtcc
     1501 gctcagtata cacgacgctg tctcccgcgc gagcgatctc cgcgacctgg atgccgaccg
     1561 gttgtccctg cgccatgatc accatggaat cgatgcgcgg cttgaggtct gccacctgga
     1621 agctgagcgg acctgccgac ggcgtgatgt cctgctcggt gagcggccgg ccgttggggg
     1681 cgtagatccg caccgtaccg agcttgctca gccggccgta gagccgggag gcatcgccgg
     1741 ccaccacgat cgtcagcttg gcgggatcga acacccgccg agcgacactc cgcaccgtca
     1801 ccgcgctgac tttctcgagg cgtgcgcggt aggtcgtgat ataggtggag ggcacgccga
     1861 aggtgcgcgc ctgggccacg gccgcggcaa cctgcgacat cgtctggagc cggagcggga
     1921 actcgccgga gagactcgaa cgggcgagct cgagttcccg cgccggcacc aggtcggtcc
     1981 gcaaatgggc gagctgcgag aggatctcgc gcacggccga gtcgccgacc tggaccggca
     2041 cttccgcact ggcctggaag agaccgaggc ccgcggtgcg ctggaaggca gccccggtgg
     2101 agagactcca gccccgctcg ttgttgagcg cgcgattgag ccgggaggtg ccgccttcgc
     2161 ccaggatacg gttgaggacc gcggcggcgt agtaggaggt gtcggtgccg gcaaaggtgg
     2221 tgttgcccac gatgatatga gccgtctgcg ccccaccgcg atggatcagg tagatcgtcg
     2281 gcggaaccgc tgtcggcggc tgcgccgcga gcggagcggg gcggaggccc ttccacgctc
     2341 cgagtgactt tgtcgccaga cgctgggcct cggccaccgt gatgtcgcca gccatgacga
     2401 gcaccgatcc ggatggccgc atccgtgcca gccggaagct ctccaggtca gcccgggtga
     2461 gctggctcac gctggcaggg agcggccgcc gggcataggg atgctggcga taagtcccga
     2521 ccaggaatac ccggccggcc agcgcgcccc catcgctcgg ctctgtcgtg agggtcccga
     2581 gaatcacttc ctgcgcagtc cggagttcgg tggtgtcgag cgtcgggcga agtaccatgt
     2641 cgccgatgag atcgagcacc gtggccgcat gagcggaaag cacatcggcc tggatactga
     2701 gggcgtccgg atcggagacg gcgcccaggc taccgccgat cgcctcgata gcggccgcga
     2761 actgcgcggc actccgggtc ccggcgccgc gggtgagcaa ccgggccagg atgtcggagg
     2821 tgccttcctt gtccgccgga tcgaaggccg agccggccgg cgtcatcagg gtgatggaaa
     2881 gcaccggctg gcgaggctgc tccacgacca gcagcctgag cccgttcggc agcagcactt
     2941 cccttggggc aggaagtggg aagggtgcga tgacgccggg cgcaggcggc tcggcgggat
     3001 actgtgccgc gagtggccct gcgccaatga ggacgagcgc cgcgaggagt cgggtg
//
LOCUS       DATIFF010000213         1813 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_645539, whole genome shotgun sequence.
ACCESSION   DATIFF010000213 DATIFF010000000
VERSION     DATIFF010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1813
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_645539"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            245..1504
                     /locus_tag="VLD58_03150"
     CDS             245..1504
                     /locus_tag="VLD58_03150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HSB53319.1"
                     /translation="MPGRNFLFVPGPTNTPDRILRAMHVPMEDHRSSSFPDLAGPLLR
                     DLRKIFKTEQGQVIVFPGTGTGGWESALVNTLSPGDKVLSFRYGQFSHLWIDMMQRLG
                     LDVTVVDVEWGDGAPPEMIQDLLAKDTGHAYKALCVVHNETATGVTSDIGAVRRAMDA
                     ARHPALLFVDSVSGLASIDFRMDEWKVDVAITGSQKGFMLPAGAGIVCVSPRALEQGK
                     TARLPRCYWSFEDMVKANATGYFPYTPSIPMLYGLRESVTMLLEEGLENVFARHHRLA
                     EGCRRAVAAWGLNLCARAPRWYSDTVSAIMVPSGFNGADVIDVAYRRYNFALGAGLNK
                     VAGKLFRIGHLGDLNEITLLAGIGGTELAMHDVGIKVELGSGTAAAQRYWIETAKPLP
                     PRKAAGSPDAATRAAEAKRPAGAGAAA"
     gene            1501..>1813
                     /locus_tag="VLD58_03155"
     CDS             1501..>1813
                     /locus_tag="VLD58_03155"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HSB53320.1"
                     /translation="MSHTRYEPARPRLQRSELAVPGSNPAMFQKALDSAADYVFLDLE
                     DAVAPPDKEQARINVIQALRDYDWRGRGKTICVRVNGIDTHYFYRDIVDVVEQAGDRL
                     DV"
BASE COUNT          285 a          606 c          644 g          278 t
ORIGIN      
        1 ccgcggggtg tgcagcgagg gcagcggtca gcgccggtcc cggtgcggcc gcatggaccg
       61 ccgcccagta caggtcggtc agcagtgccc gcgggtcagc gggtcgtcgg gcagtcgaca
      121 ttgttgattc gttccaggag tcgaaggggc ggccgtcgcg tatgaacata cagccgcccg
      181 caagcattcg cgcgagagcc cagagctccc gctccgtgtt gtctccagcg tagaggatga
      241 tgccatgcca ggccgcaact tcctgttcgt tcccggtccc acgaacacgc ccgatcgcat
      301 cctccgcgcg atgcacgtgc cgatggagga ccaccgttcc tcgagctttc ccgatctcgc
      361 ggggccgctg ctcagggacc tgcgcaagat cttcaagacc gagcagggcc aggtcatcgt
      421 cttccccggc accggcaccg gcgggtggga gtcggcgctg gtgaacaccc tgtcgcccgg
      481 cgacaaggtg ctctccttcc gctacggcca gttcagccac ctgtggatcg acatgatgca
      541 gcgtctgggg ctcgacgtca cggtggtgga cgtggaatgg ggcgacgggg cgccgccgga
      601 gatgatccag gacctgctgg cgaaggacac cggacatgcc tacaaggcgc tgtgcgtggt
      661 ccataacgag accgcgaccg gggtgaccag cgatatcggc gcggtgcgcc gcgccatgga
      721 cgcggcccgc cacccggccc tcctcttcgt ggacagcgtg agcgggctgg ccagcatcga
      781 cttccggatg gacgagtgga aagtggacgt ggccatcacc gggtcccaga agggcttcat
      841 gctgccggcc ggcgccggca tcgtctgcgt gagcccgcgg gcgctggagc aggggaagac
      901 ggcccggctg ccgcgctgtt actggagttt cgaggacatg gtcaaggcga acgccaccgg
      961 ctatttcccc tacacccctt ccatccccat gctgtacggg ttgcgtgagt cggtgaccat
     1021 gctgctggag gaggggctgg agaacgtgtt cgcgcgccac caccgcctgg cagaggggtg
     1081 ccggcgcgcc gtggccgcct gggggctcaa cctgtgcgcc cgggcgcccc ggtggtattc
     1141 ggacacggtc agcgccatca tggtgccgtc cggcttcaac ggagccgatg tgatcgatgt
     1201 cgcctaccgg cggtacaact ttgccctcgg tgccggcctc aacaaggtcg ccggcaagct
     1261 gttccgcatc ggccatctgg gcgatctgaa cgagatcacc ctgctggccg ggatcggcgg
     1321 taccgagttg gccatgcacg acgtgggcat caaggtcgag ctcggctcgg gcaccgccgc
     1381 ggcgcagcgc tactggatcg agactgcgaa gccgctgccg ccccggaagg ccgccggctc
     1441 tcccgacgcc gccacccggg cggccgaggc caagcggccg gcgggcgcgg gagcggcggc
     1501 gtgagccata cccgttacga gccggcccgc ccgcggctgc agcggagcga gctggccgtt
     1561 ccgggctcca atccggcgat gttccagaag gcgctcgaca gcgccgcgga ctacgtgttc
     1621 ctcgacctcg aggacgcggt ggcgccgccg gacaaggagc aggcccggat caacgtcatc
     1681 caggcgctgc gggactacga ctggcgcggg cgcggaaaga cgatctgcgt ccgggtcaac
     1741 ggcatcgaca cccactactt ctatcgcgac attgtggacg tggtggagca ggccggcgac
     1801 cggctggacg tgg
//
LOCUS       DATIFF010000214         3533 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_953731, whole genome shotgun sequence.
ACCESSION   DATIFF010000214 DATIFF010000000
VERSION     DATIFF010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3533
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_953731"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(242..1270)
                     /locus_tag="VLD58_03160"
     CDS             complement(242..1270)
                     /locus_tag="VLD58_03160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HSB53321.1"
                     /translation="MTPLRTHLLAGQVIPAHPLALTQERQLDERRQRALTRYYMAAGA
                     GGIAVGVHTTQFSIREHGLLEPVLALAAETVAAELKARPRHFVRIAGALGRTPQAIHE
                     TDLAARLGYDAVLLSLSAWRDAAEPEILTHCREIANLLPVFGFYLQPAVGGRPLPYSF
                     WRSFADIPNVVGIKIAPFNRYQTLDVVRAVADSGRHDIALYTGNDDSIVMDLLSRFRF
                     GGAERRLVGGLLGQWAVWTRRAVEMLHAIRRLPDAPVDPAWFRHAGALTDANAAIFDA
                     AHGFAGCIAGIHEVLRRQGLMEGTWCLNPDEGLSPGQKEEIDRVIAAYPDLTDDGFVK
                     ENLDAWMK"
     gene            1503..>3533
                     /locus_tag="VLD58_03165"
     CDS             1503..>3533
                     /locus_tag="VLD58_03165"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HSB53322.1"
                     /translation="MRSASRSFLARTLVLVTGALTLLAARPGPEPGLSGYSAEASRRE
                     LEWERRMREVPSPDSLREAMRRLSARPHHVGSPYDKDNAEWLLARFKSWGWDARLETF
                     DVLFPTPKERVLELVAPVRYTARLTEPPLAIDPTSGQKAEQLPTYNAYSIDGDVTAPL
                     VYVNYGVPADYDQLERLGISVKGAIVIARYGQSWRGIKPKVAAEHGAVGCIIYSDPSG
                     DGYSAGDVFPQGAFRPADGVQRGSVMDMPLHPGDPLTPGQGSTPGTPRLARADAKTLT
                     RIPVLPISYRDAQPLLAALTGPVAPGNWGGGLPITYHVGPGAAKVHLQLQFNWDTRTL
                     YDVIATLKGSVAPDEWIVRGNHHDAWVNGAEDPISGQVALLEEARALGAIAKQGWQPR
                     RTIVYAAWDGEEEGLLGSTEWAEAHAEELGKKAVVYINTDGNGRGYLGMGGSHTLERF
                     MNDVARDIPDPETGLSAWKRAQLATIRNGTTEQRSAARSSLIRLDPLGSGSDWSAFLQ
                     HLGIASLNLGYGGEDDGGIYHSIYDDFYWYTHFSDTSFVYGRALAQTVGTTVMRLAGA
                     ELLPLQFTGLAENVATYSTEVQKLLDDRRSEFEERNRQLDEGVFAATNDPRRPTVAPP
                     REEVPPHLNWAPLQNALDSLKRSAARYDSLASAIAEAGGAGFAKAAQAGLNSR"
BASE COUNT          580 a         1220 c         1202 g          531 t
ORIGIN      
        1 gctaccctca gttgagtgtg gtatcgcaat gatatcactt tgaaatcccc gcgtcaaggt
       61 aggcggtggg tcagcttgac ccagtaccgt caaggtagtg gtggtgggcg acggcgcccc
      121 aaggcgcggg gcggggcccc cccccgattc aagctggttg gggggaaccg aactgtggta
      181 accatgttga cgccggaaag ggcgcgaaaa tgcgggggac tcctcctgcg gtcggtggga
      241 cctacttcat ccaggcgtcc aggttctcct tcacgaaccc atcgtcggtc aggtccgggt
      301 acgccgcgat cacccggtcg atctcctcct tctggccggg cgaaagcccc tcatccggat
      361 tcaggcacca ggtcccttcc atcaggcctt gtctccgaag cacctcgtga atcccggcga
      421 tgcaccccgc gaagccgtgc gccgcgtcga agatcgccgc gttggcatcg gtcagggcac
      481 cggcgtggcg gaaccatgcc ggatccaccg gcgcgtccgg gagacgccgg atggcgtgga
      541 gcatctcgac cgcgcgccgg gtccagaccg cccactgccc cagcagtccg cccaccagcc
      601 gtcgctccgc gccgccgaaa cgaaatcggg agagcaggtc cattacgatg ctgtcatcgt
      661 tgccggtgta gagcgcgatg tcgtgccgcc ctgaatccgc caccgcccgc accacgtcca
      721 acgtctggta ccggttgaac ggcgcgatct tgatgcccac cacattggga atgtcggcga
      781 agctgcgcca gaaactgtag ggaagcgggc ggccccccac cgccggttgc aggtagaagc
      841 cgaacaccgg cagcaggttg gcgatctccc ggcagtgtgt cagaatctcg ggctccgccg
      901 catcgcgcca ggcactcagc gacaacagca ccgcgtcata gcccagccgg gccgccaggt
      961 cggtctcgtg gatggcctgg ggcgtccggc ccagcgcccc ggcaatccgg acgaagtggc
     1021 ggggccgggc cttgagctcc gccgccaccg tctcggcggc cagggccagc accggctcga
     1081 gcaggccgtg ctcgcgaatc gagaactggg tggtgtgtac tccaaccgcg atcccccccg
     1141 cgcccgccgc catgtagtag cgcgtgagcg cccgctgccg ccgctcgtcc agctgccgct
     1201 cctgggtgag tgcgaggggg tgcgcgggga taacctgccc cgccaggagg tgggtgcgga
     1261 gcggagtcat gcgtacggcc ggtggccggg gcggccttgc gcggagctgc tgttaggcat
     1321 caagaaaggt aagcccggac gcaagcgctg tcgctgcggg ggttctccca acggaggtag
     1381 acctgtcggc gcatcgcagg cgcggtacct tggagccggc tcggggtccg ggccggagtg
     1441 catgacctgc cggacggact cgccagccgg cagagcagaa taccgatcaa tggagacaaa
     1501 cgatgcggtc tgcgtcacgg tcgttcctcg cccgaaccct ggtgctggtc accggcgccc
     1561 tcaccctcct cgcggcccgt cccgggcccg agccggggct gtccggctat tcggccgagg
     1621 catcacgccg ggagctcgag tgggagcggc ggatgcggga agtgccaagt cccgactcgc
     1681 tccgggaggc gatgcggcgg ctctcggccc ggccgcacca tgtcggctcg ccctacgaca
     1741 aggataacgc ggagtggttg ctggcccggt tcaagtcgtg gggttgggac gccagactgg
     1801 agacattcga tgtgctcttc ccgaccccga aggagcgggt gctcgagctg gtggcgccgg
     1861 tgcgttacac cgccaggctg accgagcccc cgctcgcgat cgacccgacc tcgggccaga
     1921 aggccgagca gctgccgacc tacaatgcct actccatcga cggggatgtg acggcccctc
     1981 tggtgtacgt caactatggc gtgccggccg actacgacca gctggaacgg ctcggcatct
     2041 cggtgaaggg cgccatcgtg atcgcgcgct acggccagtc gtggcgcggc atcaagccca
     2101 aggtcgcggc cgagcatggc gcggtgggat gcatcatcta ctccgatccc tccggcgacg
     2161 ggtacagcgc cggcgatgta ttcccgcagg gcgcattccg tcccgccgat ggggtgcagc
     2221 gcggcagcgt gatggacatg ccgctccacc ccggcgaccc cctgactccg ggtcagggct
     2281 cgacgccggg cacgccccgc ctcgcccggg ccgacgcgaa gaccctgacc aggattccgg
     2341 tcctccccat ttcctaccgc gacgcccagc cgctcctggc ggcgctcacc ggtccggtcg
     2401 caccggggaa ctggggtggc ggactcccca tcacgtacca cgtcggcccg ggcgccgcca
     2461 aggttcacct tcagcttcag ttcaactggg ataccaggac cctgtacgac gtcatcgcca
     2521 ccctcaaggg cagcgtggcg ccggatgagt ggatcgtgcg gggcaatcac cacgacgcct
     2581 gggtgaatgg cgccgaggac ccgatctcgg ggcaggtcgc gttgctggaa gaggcacggg
     2641 cgctgggcgc catcgcgaag cagggatggc agccgcgccg caccatcgtc tacgccgcct
     2701 gggatggcga ggaggagggt ctcctcgggt ccaccgaatg ggccgaggcc catgcggagg
     2761 aactagggaa gaaggcggtg gtctatatca acaccgatgg gaacggacgc ggttatctcg
     2821 gcatgggtgg ctcgcacacc ctcgagcggt tcatgaacga cgtggcccgg gacatccccg
     2881 atcccgagac cggcctcagt gcctggaagc gcgcccagct tgccaccatc aggaacggaa
     2941 ccaccgagca gcggagcgcg gcccggtcgt cgctcatccg gctcgacccg ctcggctccg
     3001 gctccgactg gtctgccttc ctccagcacc tcggcatcgc gtcactcaac ctcggctacg
     3061 gcggcgagga cgacggcggc atctatcact cgatttacga tgacttctac tggtacaccc
     3121 acttcagcga taccagcttc gtctacggcc gggcactggc gcagaccgtg gggaccacgg
     3181 tgatgcggct ggccggggcc gagctcctgc cgctccagtt caccgggctg gcggagaatg
     3241 tcgcgactta cagcaccgag gtgcagaagc tcctcgacga ccggcggagc gagttcgaag
     3301 agcggaaccg ccagctggac gaaggagttt tcgccgccac caacgatccg cggcgcccga
     3361 cggtcgcgcc gccgcgtgag gaggtgccgc cccacctcaa ctgggcgccg ctccagaacg
     3421 cgctcgattc gctcaagcgc agtgccgccc ggtacgactc gctcgcctcg gcaatcgccg
     3481 aggcgggcgg cgccggcttt gccaaggcgg cgcaggcggg cctcaacagc agg
//
LOCUS       DATIFF010000215         1175 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_953769, whole genome shotgun sequence.
ACCESSION   DATIFF010000215 DATIFF010000000
VERSION     DATIFF010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1175
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_953769"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="VLD58_03170"
     CDS             complement(<1..279)
                     /locus_tag="VLD58_03170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53323.1"
                     /translation="MTTPRPIREAGDPAEQPPVVRPSNPSVPDPWGVKRAENLIAGLT
                     GVLSASIVVTPQGEISEVHVLASPDVPPKQVVRNIESALMAQLGMRVDH"
     gene            complement(509..>1175)
                     /locus_tag="VLD58_03175"
     CDS             complement(509..>1175)
                     /locus_tag="VLD58_03175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005812018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSB53324.1"
                     /translation="RDDLYYRLNVLSIYLPPLRERKSDIPLLVRRFIAEFAKQHDRRF
                     HGITPEALQILVDADWPGNARQLRNLIESMVVLAPEGEIRASDIPREYQERGRGLPMR
                     VVGATREVVGKELEFIFRSLVELKLQVEELRRRLDERPAAHRVEVIEVDHHGAPLAPV
                     EAAPSPEEPVLYRPGMSMAEVERAAIEAALRDTNGNRRKAAEVLGIGERTLYRKLKAY
                     ALA"
BASE COUNT          165 a          424 c          390 g          196 t
ORIGIN      
        1 gtggtccacg cgcatcccga gctgggccat gagcgccgat tcgatgttgc gcacgacctg
       61 cttgggcggc acgtcgggcg aggccaggac gtgcacctcg ctgatctcgc cctgcggcgt
      121 cacgacgatg ctggccgaca gcacaccggt gagacccgcg atcaggttct ccgcccgctt
      181 cacgccccag ggatcgggga cgctcgggtt ggacgggcgg acaacgggtg gctgttccgc
      241 agggtcaccc gcttcgcgaa tcggtctcgg tgtggtcacg tcggcctctc tcaggacaac
      301 cggtcatgcc tgctgcgcta ccgccacagg gcaacgggga gcaatagtac aacgttttcg
      361 ctgccgccgt aacgggctgc taagatgaag cctccctcac ggccccgcaa cctcccccgc
      421 cgcccccggt tcccccgccg gcacggcccc ggcccggccg ctaaatggta ctacgaactc
      481 cttgatttcg catcaagtga ggatgccact aggccagggc gtacgccttg agcttgcggt
      541 acagcgtccg ctccccaatc cccagcacct cggctgcctt gcggcggttg ccgttcgtgt
      601 cgcgcagcgc cgcctcgatc gcggcccgct ccacctcggc catggacatc ccgggacggt
      661 acagcaccgg ctcctcgggg ctcggggccg cctcgacggg ggcgagcggc gccccgtggt
      721 gatccacctc gatcacctcc acccggtgcg ccgcgggtcg ctcgtccagc cggcgccgca
      781 gctcttcgac ctgcagcttc agctccacca ggctgcggaa gatgaactcc agctccttgc
      841 cgaccacttc gcgggtcgcc ccgacgaccc gcatcgggag gccccggccg cgctcctggt
      901 actcgcgggg gatgtcgctc gcccggatct cgccttcggg cgccagcacc accatcgact
      961 cgatcaggtt gcgcagctgg cgcgcgtttc cgggccagtc ggcgtcgacc aggatctgca
     1021 gcgcctctgg ggtgatgccg tggaagcggc ggtcgtgttg cttggcgaat tcggcgatga
     1081 agcgccgcac caggagcggg atgtcgctct tgcgctcgcg cagcggcggg aggtagatgc
     1141 tgaggacgtt gagccggtag tagaggtcgt cgcgg
//
LOCUS       DATIFF010000216         1461 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1415399, whole genome shotgun sequence.
ACCESSION   DATIFF010000216 DATIFF010000000
VERSION     DATIFF010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1461
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1415399"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1377
                     /locus_tag="VLD58_03180"
     CDS             <1..1377
                     /locus_tag="VLD58_03180"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSB53325.1"
                     /translation="ANEPFSDGMSDEITTALDRVTGLTVAARSTAFGFKGSGIEPREV
                     GRRLHVRYVLDGGVRVGGDRRRVSVQLIDVASGSEVWSENYDRDVRDRDIFGVQDSIA
                     RAIVTSLRVHLTPSGRAGLASRATASPEAHDAYLKGRFLWGQRGTGGAAALHRAIEYF
                     DQAIALDSNYAQAWSGLADAYSMLPGFGGEAAAAWYPRARAAAERALALDSTLADPYT
                     SLGIISLFADWDWPAAGRELARALAIDSTAVRSHQFRAWYFTATGQVDSAVAEMRTAL
                     MLDPSSQVLNVRLGTTLFQARRYREAETVYHQALALDSSNVAARSELGTVLGLEHRYP
                     DALAILRALPRSTWDLQAGWTVAAPLGWLEGISGHRAEALQVERHLQELARTQFVTPE
                     AFAWVAIGLGDTTRALDWLERAYQQRSFFSPFLLFPIYDPLRGQPRFQRIVQDMKLVI
                     PPAAAGGP"
BASE COUNT          216 a          531 c          489 g          225 t
ORIGIN      
        1 gccaatgagc ccttcagcga cggcatgtcc gacgaaatca ctacggccct tgaccgggtg
       61 accggcctca ccgtggctgc ccgttcaacg gcgttcggct tcaagggctc gggcatcgag
      121 ccccgggaag taggccggcg gctccacgtc cgctacgtcc tcgacggggg cgttcgggtg
      181 gggggcgacc ggcggcgggt gagcgtgcag ctcatcgacg tcgccagcgg cagtgaagtg
      241 tggtccgaga actacgaccg cgatgtccgc gaccgggaca ttttcggcgt ccaggactcc
      301 atcgcccggg cgatcgtcac ctccctccgg gtacatctga ccccctcggg acgggccggc
      361 ctggcgagcc gcgccacggc cagtcccgaa gcccacgacg cctacctgaa gggacggttc
      421 ctctggggcc agcgcgggac cggcggggcg gccgcgctcc accgcgcgat cgagtatttc
      481 gatcaggcga tcgcgctcga ttcgaattac gcccaggcct ggtccggcct cgcggatgcc
      541 tacagcatgc tgcccggttt cggcggtgag gccgccgcgg cctggtatcc cagggcccgg
      601 gccgccgccg agcgtgcgct ggccctggac agcaccctgg ccgatcccta cacctcgctc
      661 ggcatcatca gcctcttcgc cgactgggac tggccggcag cgggccggga gctcgcccgc
      721 gcgctggcga tcgactcgac cgcggtccgt tcccaccagt tccgggcctg gtacttcacc
      781 gccaccggcc aggtcgactc ggcggtagcc gagatgcgga ccgccctcat gctggatccg
      841 tcgtcgcagg tgctcaacgt tcggttgggc accacgctgt tccaggcccg tcggtatcgc
      901 gaggcggaaa ccgtgtatca ccaggccctc gcactcgatt ccagcaacgt cgccgcccgc
      961 agcgagctgg gcaccgtact cggcctggag caccgatacc ccgacgcgct ggcgatcctc
     1021 cgcgcattgc ccaggtcaac ctgggacctg caggccggat ggacggtcgc ggcgcccctt
     1081 ggatggctgg aaggcatctc cggccaccgg gccgaggcac tccaggtcga gcgccacctc
     1141 caggagctgg cccgaacaca attcgtgaca cccgaagcgt tcgcctgggt cgccatcggc
     1201 ctcggcgaca ccacccgggc gctcgactgg ctggagcgcg cctatcagca gcgatcgttc
     1261 ttcagcccgt tcctgctgtt ccccatctac gatccgttgc ggggccagcc ccgctttcag
     1321 agaatcgtcc aggacatgaa gctggtcatt ccgccggcag cggctggcgg tccgtaggcg
     1381 gagcgcggga acgaagccgg gacagggcag gtcggagctc ggggcccagg tcccgagcga
     1441 ctcgttcgcc gcaaaggctc c
//
LOCUS       DATIFF010000217         1235 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_953915, whole genome shotgun sequence.
ACCESSION   DATIFF010000217 DATIFF010000000
VERSION     DATIFF010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_953915"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..705
                     /locus_tag="VLD58_03185"
     CDS             <1..705
                     /locus_tag="VLD58_03185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53326.1"
                     /translation="GEEINLHRLLNTLGWLWAEVGDVERATDFNRRGAERARKRGFPE
                     TIANSELNLADLSLSSGDLPAAAELLDGVLRLVNDPTVSEWMKWRYSTRLFASLGDLA
                     LARGDTAKALEWAHRCLEIAARTNARKNLVKGWRLRGEIATIRRQWEDAGAALREALT
                     IAQAIHNPTQLWKTHVAIARLHAATKGPNAAREGYQKAREVVDHLMAGLRHPELRASL
                     ERAAPIRQVYDLSAPE"
BASE COUNT          212 a          411 c          434 g          178 t
ORIGIN      
        1 ggagaggaga tcaacctcca ccggctgctc aacacactgg gttggctgtg ggccgaggtc
       61 ggcgatgtcg agcgcgccac cgacttcaac cggcgcggcg ccgagcgcgc gcggaagcgg
      121 ggtttcccgg agacgatcgc caactcggag ctcaacctgg cggacctgtc gctctcctcc
      181 ggtgacctgc cggcggcggc cgaactgctg gacggggtcc tgcggctggt gaacgacccc
      241 accgtcagcg agtggatgaa gtggcggtac tcgacccgcc tctttgcgag cctgggggac
      301 ctggcgctgg cccgaggcga tacggcgaaa gcgctcgagt gggcccaccg gtgcctggag
      361 atcgccgccc ggaccaatgc ccgcaagaac ctggtcaagg gctggcgtct ccggggcgag
      421 atcgcaacga tccgccggca gtgggaggac gccggggcgg cgctacgcga ggccctcacg
      481 atcgcccagg cgatccacaa cccgacgcag ctctggaaga cccacgtcgc catcgctcgg
      541 cttcacgccg caaccaaggg accgaacgca gcccgggaag gctaccagaa ggcccgcgag
      601 gtcgtcgatc acctcatggc gggcctgcgc cacccggaac tgcgcgcgag tctcgagcgt
      661 gcggcgccta tccggcaggt ctacgacctg agcgcacccg agtagacctc atcgccacgc
      721 tggcctctgc aagctgcaac cccggcaact gcgcgaggcg caggagcacc tgagtgagtg
      781 agctgagacc gggccctagg aactacaccc tggaccaggc cgggccgggc ccgggaatca
      841 ggcgcgctcg ccagccgagg gatcgcgctg aagctggcag agatggggcc cgggtggcgc
      901 cattggctac tatcagaacg agggagcgcg actgagacgc tgcacgggtc cggaagcatg
      961 gtgtaaacgg attcgtcgtg caggcggatg tctcgcggcc cgacgacgtt ccgcgaaggc
     1021 ggcgctcgag tcgctggttc actacttcgc ggtgacgtgc cgggtcgccg ggcggtcagt
     1081 attgacagaa tcgccgagtc cggctaagtt tctggccact aaccgtccgg cgctcgcagg
     1141 aggccgtcta tggtccatcg acgccctcgt tgaccagtct catggccatc gggggcgttt
     1201 gtgttttcgc gccgccacac cacgggggtg atgcc
//
LOCUS       DATIFF010000218         6234 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_492317, whole genome shotgun sequence.
ACCESSION   DATIFF010000218 DATIFF010000000
VERSION     DATIFF010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6234
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_492317"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1104)
                     /locus_tag="VLD58_03190"
     CDS             complement(<1..1104)
                     /locus_tag="VLD58_03190"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSB53327.1"
                     /translation="MAITRRSGGAVHSPTAADHLAEARAAEREARTDAAVVAYGAAIA
                     TAERTGEGPTLAEALRRVAVLYHQRNDPEQARTLCRRSYEVARGLGNAPLAAEALNTL
                     GAVEFERGQMQVARELLGEALTLGQSRPDLLSRIEQNLGIIATIQGDHAAALQHYRSS
                     LAACQATGDDKGCAIAYHNLGMISADQREWAEAERYYHESFRLAQATGEVHLQGLCRL
                     NHAEVHLARQSFELARESAEAALAIFDQLGSRLDKSDAYRVLGVVYRETGRNALAQAR
                     LTAAIEAAVATGAVLSEAEASRELARLFQTMGRNQEALTLLNRAHGLFHRIDAHLDLV
                     DVQAKVEELEGTFLAVVRDWGQSIESADSYTHGH"
     gene            complement(1107..1658)
                     /locus_tag="VLD58_03195"
     CDS             complement(1107..1658)
                     /locus_tag="VLD58_03195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53328.1"
                     /translation="MIRSRRLLACLSTLALLATGLTSCTTGDSPTAPSAPNAVAAQAP
                     DANLLLVTPLLNGLLACNLQQYGYTAKLIGPAGGTIQVNGHVLSIPAGALSQNVLISA
                     EAPSDFVASVRFKPEGLRFARKATLTLDYSNCPLGRLNLLKRVAYTSDNLNILSYLLS
                     RDDLLRMRVSADLEHFSRYAVAW"
     gene            1998..2777
                     /locus_tag="VLD58_03200"
     CDS             1998..2777
                     /locus_tag="VLD58_03200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HSB53329.1"
                     /translation="MSYATLLSELRDGVLTITVNRPDKLNALNDEVIRELGQAALEAA
                     TRDEVRGVILTGAGTKAFVAGADIGELASQTPHRGKERSLAGQAVFRRFEALRKPVIA
                     AVNGFCLGGGCELAMACHLRIASESARFGQPEVKLGIGPGYGGTVRLPRLVGRGRALE
                     LLLTGAMIDAQEAWRIGLVNRVVPGDRLLSETETLLRTMLAQGPQAVACVLEAVDAGT
                     EMARDEALLLEANHFGLLSSTGDMREGMQAFLEKRPPVFKG"
     gene            2882..3271
                     /locus_tag="VLD58_03205"
     CDS             2882..3271
                     /locus_tag="VLD58_03205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53330.1"
                     /translation="MLVLGALVGAIAACNTRDRPTFPTGGGGGDSTGPVTTIDEPGQD
                     TTVTAGPGVFVNGRSTDADGLDTVYVETEGGVTTFSPFVRPSSPFRFGLPITTNGLAG
                     HTITVRIFATDRNGNRGDTATRQLTVQ"
     gene            3271..4359
                     /gene="recF"
                     /locus_tag="VLD58_03210"
     CDS             3271..4359
                     /gene="recF"
                     /locus_tag="VLD58_03210"
                     /inference="COORDINATES: protein motif:HMM:TIGR00611.1"
                     /note="All proteins in this family for which functions are
                     known are DNA-binding proteins that assist the
                     filamentation of RecA onto DNA for the initiation of
                     recombination or recombinational repair; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication and repair protein RecF"
                     /protein_id="HSB53331.1"
                     /translation="MRLTRLATRGFRNLVDLDLRVPPPGLVVLGANGQGKTSLLEAIA
                     YPVLFRSFRTSMDAELVRFGEAGFRVALEFEREGRPRSVLAEFRVAGRRRKQELDGAA
                     AERLVDAAGAWLAVVFAPDDVRLAAGPSSGRRLFLDRTLALSDPVYLRALARYRAALA
                     QRNAALRQGRPDLASAFDAPLAAAGAVIVARRAQWVETVGPELTTSLIALGEHSAEAD
                     LQYRGTPELADPAAWPERLAQAAGTDAARRMTTVGPHRDDLELLLGGRPLRAYGSTGQ
                     HRSAAIALKLLELDTIGRAAGAAPALLLDDVFAELDGERQERLAARLLGAAAAQVFIS
                     APRADELPRRLELPVWRVAQGRIEAGSA"
     gene            4356..4655
                     /locus_tag="VLD58_03215"
     CDS             4356..4655
                     /locus_tag="VLD58_03215"
                     /inference="COORDINATES: protein motif:HMM:NF017103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HSB53332.1"
                     /translation="MRQDSKLTRLGEALQVYLKKAGLVRRIGQARVLEDWAELVGPQI
                     AKVTQPESVGQDGILRVRVATASWAAELQLMTPQILARVNKDRAGRITGIRWTAG"
     gene            4820..>6234
                     /locus_tag="VLD58_03220"
     CDS             4820..>6234
                     /locus_tag="VLD58_03220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit B"
                     /protein_id="HSB53333.1"
                     /translation="MAKEPTGNGGQQYDAGSIQVLKGLEAVRKRPGMYIGSTAENGLH
                     HLVYEVVDNSIDEALGGFCDDIRVTIHKDNSISVEDNGRGIPVEMHPTEKMPAVEVAL
                     TVLHAGGKFDKSNYKVSGGLHGVGVSVVNALSERTEVIVKRDGFKWRMSFVRGQTVKK
                     LEKLDKAKDTGTLVRFKPDPEIFSVLEYSYSTLADRMRQLAFLNKGVTITLKDDRGEE
                     PKQEAFFARGGLIQFVEWLNRNKKPLHPKPIAFTVTKDDVEVDVAIQYEDGYNENIFT
                     FVNNINTHEGGTHLTGFRAALTRAINEFAKQQGSLKKEDFSLTGEDIREGLTCVLHIK
                     VREPQFEGQTKTKLGNSEVEGIVKQVVYDQLRTFLDEKPAVGRAIIDKAVSAARAREA
                     ARKARDLVRKKSGLEGAVLPGKLADCSLSDPALCELYLVEGDSAGGSAKQGRDRQFQA
                     ILPLRGKILNVEKARIDKILS"
BASE COUNT         1032 a         2064 c         2180 g          958 t
ORIGIN      
        1 atgcccgtgg gtgtagctgt cggccgattc gatcgactgg ccccagtcac gcaccaccgc
       61 gaggaaggtc ccctccagct cctcgacctt ggcctgcacg tcgaccaggt cgagatgcgc
      121 atcgatccgg tgaaagagcc cgtgggcccg gttgagcagc gtgagcgcct cctgattgcg
      181 ccccatcgtc tgaaagagcc gcgccagctc gcgcgacgcc tccgcttcac tgagcactgc
      241 cccggtagcg acggcggcct cgatcgcggc ggtcaggcgc gcctgggcca gtgcgtttcg
      301 gccggtctcg cgatacacca cgccgagcac ccggtaggcg tcggacttgt cgagccggga
      361 gccgagctga tcgaagatgg ccagcgccgc ttcggcgctc tcgcgcgcca gctcgaacga
      421 ctgccgggcg aggtgtacct cggcatgatt gagccggcag agcccctgga ggtggacctc
      481 gccggtcgcc tgggccagcc ggaagctctc gtgatagtag cgctccgcct cggcccactc
      541 gcgctggtcg gcgctgatca tcccgagatt gtggtaggcg atggcgcagc ccttgtcgtc
      601 gccggtggcc tggcacgcgg ccagggagga gcggtagtgc tggagagcag cggcgtggtc
      661 gccctggatc gtcgcaatga tgccgaggtt ctgctcgatc cggctcagca gatcgggccg
      721 ggattgcccc agggtcagcg cctcaccgag aagctcgcgg gccacctgca tctgaccgcg
      781 ctcgaactcc acggcgccga gggtgttgag cgcctcggcg gcgagggggg cattgcccag
      841 accccgggcc acttcgtagc tccggcggca gagggtgcgg gcctgctccg ggtcgttgcg
      901 ctggtggtaa agtacggcga cccggcggag cgcctccgcc agggtcgggc cttcgccggt
      961 gcgctcagcg gtggcgatgg ccgctccgta ggccaccacc gccgcgtcgg tgcgtgcttc
     1021 ccgctcagct gcccgcgcct cggccaggtg gtcggcggcg gtcggtgaat ggaccgcccc
     1081 gccggaccgc cgggtgatgg ccatgactac caggccactg cgtaacggga gaagtgctcc
     1141 aggtcggcgc tgacccgcat ccgcagcaga tcgtcgcggg agagcaggta actcaggatg
     1201 ttgaggttgt cgctggtgta ggccacccgc ttgagcaggt tgagccggcc caggggacag
     1261 ttggagtagt cgagagtgag ggtcgccttg cgggcgaacc gcagcccttc cggcttgaag
     1321 cgcaccgacg ccacgaagtc cgagggcgct tcggcgctga tcagcacgtt ctggctcagg
     1381 gccccggccg ggatgctcag cacatggccg ttcacctgga tggtcccgcc cgccgggccg
     1441 atcagcttgg ccgtgtagcc gtactgctgg aggttgcagg ccagcaggcc gttaagcagc
     1501 ggcgtcacca gcagcagatt ggcatcaggc gcctgggcag cgacagcatt gggagcggac
     1561 ggcgccgtgg gcgagtcgcc cgtagtgcag ctggtcaggc cggtggccag cagggcaagg
     1621 gtggagaggc aggccagcag gcggcgcgag cggatcattg cagaggctcc ggagcacggg
     1681 gttgagcgac ggggcctgtg aaggcaatgg cggtgccacg ggcatgctag ctatgcatag
     1741 attttcgaca ttacgtgcgc catgacgcta tctaaccaat tgctattaaa tgatttcagc
     1801 tgctacagac gatgacgaaa ttgaatacat taatgacacc actgcgctcg gaattccgac
     1861 agcctgagga ctgatttccg ccctggcagc cagacaccgc cgctccgctc ccgcacttcg
     1921 tggcgggcgg gcgacagcag accgagctag ctttacccgc gctcactgcc ccgtttgccc
     1981 cgactccgaa tccagccatg tcctacgcga ccctcctctc cgagctccgc gacggcgtct
     2041 tgaccatcac cgtcaaccgg cccgacaagc tcaatgccct gaacgacgag gtcattcgcg
     2101 agctgggcca ggcggcgctg gaagcggcaa cgcgcgacga ggtgcgcggg gtgatcctca
     2161 ccggcgccgg gaccaaggcc ttcgtggccg gcgccgacat cggcgagctc gccagccaga
     2221 ccccccaccg gggcaaagaa cgctccctgg ccggccaggc ggtgtttcgt cgtttcgagg
     2281 cgctccggaa accggttatc gcggcggtga acggcttctg tctcgggggc gggtgcgaac
     2341 tcgccatggc ctgccacctc cggatcgcga gcgagtcggc ccggttcggc cagcccgagg
     2401 tgaagctcgg tatcggccct ggatacggag gaacggtccg gctccctcgc ctcgtgggcc
     2461 ggggccgggc gctggagctg ctcctcacgg gggcgatgat cgacgcacag gaggcatggc
     2521 gaatcgggct ggtgaaccgc gtcgtgcccg gcgaccgcct cctgagcgag acggaaacgc
     2581 tcctccggac catgctggcc cagggtcccc aggcggtggc ctgcgtgctg gaggccgtgg
     2641 atgccggtac cgagatggcc cgggatgagg cgctgctgct cgaggccaac cacttcggcc
     2701 tcctctccag caccggcgac atgcgggaag gaatgcaggc cttcctcgag aaacggcctc
     2761 cggtgttcaa ggggtgagcg tccccatttc cggggctttt tcctctgcaa tttcgctctc
     2821 caaccgacta aaattcggga tgttttccag cccttcttcg gggcggattc cggccctgac
     2881 ggtgctggtt ctgggcgccc tcgtcggcgc cattgccgcc tgtaatacgc gggaccgccc
     2941 gacgttcccc accgggggcg gcgggggtga ttcgaccggg ccggtcacga ccatcgacga
     3001 gcctggtcag gacacgacgg tgacggccgg gccaggcgtg ttcgtgaatg gccgcagcac
     3061 cgatgcggac gggctcgaca cggtgtacgt cgaaaccgag ggaggggtga ccaccttttc
     3121 tccgtttgtg cgtccttcgt cacccttccg gttcgggctg ccgatcacga ccaatgggct
     3181 cgcgggccac acgatcacgg tgcggatctt cgccaccgac cggaacggca accgcggcga
     3241 cacggccacg cggcagctca cggtccagta gtgcggctca cccggctcgc gactcgaggc
     3301 tttcgcaacc tcgtcgatct cgatctccgg gtgcctccgc ccggcctcgt ggtgctcggc
     3361 gcgaatggcc agggcaagac gagcctcctc gaggccatcg cctacccggt gctgttccgc
     3421 tccttccgca cctccatgga tgcggaactg gtgcgcttcg gcgaagcggg gttccgggtg
     3481 gcactcgagt tcgaacggga aggccggccc cgctcggtgc tggccgagtt ccgggtggcg
     3541 gggcggcggc ggaagcagga actcgacggg gcggcggcgg agcggctggt ggatgcggcc
     3601 ggggcctggc tcgcggtggt gtttgccccc gacgatgtgc gcctggccgc agggccctcg
     3661 agcggacggc ggctctttct cgaccggacg ctggcgctct cggatccggt gtacctccgg
     3721 gctctggccc gctaccgggc tgcgctggcc cagcggaacg cggccctgcg ccagggccgg
     3781 cccgatctcg ccagcgcctt cgatgcgcca ctcgccgccg ccggagcggt gatcgtggcc
     3841 cggcgagccc agtgggtcga gaccgtcggc cccgagctca ccacttcgct gatcgcgctg
     3901 ggtgagcact cggccgaggc ggacctccag taccgcggga cgccggagct ggccgatccc
     3961 gcggcctggc ccgagcggct ggcccaggca gccggcactg atgcggcgcg gcgaatgacc
     4021 acggtgggcc cccaccgcga cgatctcgag ctcctgctcg gcgggcggcc cctcagggcc
     4081 tacggctcca ccgggcagca ccggagtgcc gccatcgcgc tcaagctgct cgagctcgac
     4141 accatcggcc gggctgccgg cgccgcaccg gccctgctcc tcgacgatgt cttcgccgag
     4201 ctggacggcg agcggcagga gcggctggcg gcgcggctcc tgggagcagc ggcggcgcag
     4261 gtgttcatct cggccccgag ggcagacgag cttccgcggc gactcgagct tccggtctgg
     4321 cgggtggctc agggacggat cgaggcagga tcggcatgag acaggattcc aagcttaccc
     4381 ggctcggcga agcgctccag gtctatctca agaaggccgg gctggtgcgg cgcatcggtc
     4441 aggcgcgggt actggaagac tgggccgagc tggtcgggcc ccagatcgcg aaggtcaccc
     4501 agccggagtc ggtcggtcag gacggcatcc tccgggtgcg ggtcgccacg gcgagctggg
     4561 ctgcggaact ccagttgatg acgccccaga tcctggcccg ggtcaacaag gaccgggcgg
     4621 ggcggatcac gggaatacgg tggacagcgg ggtgacggtt tgtggccgtt agccgttagc
     4681 cgttagccgt taggtaactg cacgttgatt gacgactccg cgacaatgcg gaacgtggaa
     4741 ccacacggaa tagctaatgg ctaacggcta aaggccaacg gcctatagcc acaggattca
     4801 catcaagacg acaggcacca tggcgaagga acctacgggt aacggcgggc agcagtacga
     4861 cgcgggatcg atccaggtcc tcaagggact cgaggcggtc cgcaagcggc cgggcatgta
     4921 catcggctcg accgccgaga acggcctcca tcacctggtc tacgaggtgg tggacaactc
     4981 gatcgacgaa gcgctgggcg gcttctgcga cgatatccgg gtcacgatcc acaaggacaa
     5041 ctcgatctcg gtcgaggaca acgggcgcgg catcccggtg gagatgcatc ccaccgagaa
     5101 gatgccggcg gtcgaggtgg ccctgacggt gctgcacgcc ggcggcaagt tcgacaagtc
     5161 gaactacaag gtctccggcg ggctccacgg cgtcggcgtc tcggtggtaa acgcgctttc
     5221 cgagcggacc gaggtgatcg tcaagcgcga cggcttcaag tggcggatgt ccttcgtccg
     5281 gggccagacc gtcaagaagc tggagaagct cgacaaggcg aaggacaccg gcaccctggt
     5341 gcgcttcaag cccgaccccg agatcttctc ggtgctggag tacagctaca gcaccctggc
     5401 cgaccggatg cggcagctgg cgttcctcaa caagggcgtc accatcaccc tcaaggacga
     5461 ccggggggaa gagccgaaac aggaggcctt cttcgccagg ggcggcctga tccagttcgt
     5521 ggaatggctc aaccgcaaca agaagccgct ccatcccaag ccgatcgcct tcacggtgac
     5581 gaaggacgac gtcgaggtgg acgtggccat ccagtacgag gacggctaca acgagaacat
     5641 cttcaccttc gtcaacaaca tcaacaccca tgagggtggc acccacctca ccgggttccg
     5701 cgcggcgctc acccgcgcaa tcaacgagtt cgccaagcag cagggctcgc tcaagaagga
     5761 agacttcagc ctcaccggcg aggacatccg cgagggcctg acctgcgtgc tgcacatcaa
     5821 ggtgcgcgag ccgcagttcg aggggcagac caagaccaag ctgggcaaca gcgaggtcga
     5881 gggcatcgtg aagcaggtgg tctacgacca gctgcgcacc ttcctcgacg agaagccggc
     5941 ggtgggccgg gccatcatcg acaaggcggt gagcgcggcc cgtgcccggg aagcggcccg
     6001 caaggcgcgc gacctggtcc gcaagaagtc gggcctcgag ggcgcggtgc tccccggcaa
     6061 gctggccgac tgctcgctct ccgacccggc gctctgcgag ctctacctgg tcgagggtga
     6121 ctccgccggc ggcagcgcca agcagggccg ggaccgccag ttccaggcga tcctcccgct
     6181 ccgcggcaag atcctgaacg tggagaaggc ccggatcgac aagatcctct ccaa
//
LOCUS       DATIFF010000219         1405 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1415564, whole genome shotgun sequence.
ACCESSION   DATIFF010000219 DATIFF010000000
VERSION     DATIFF010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1405
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1415564"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..540)
                     /gene="bshB1"
                     /locus_tag="VLD58_03225"
     CDS             complement(<1..540)
                     /gene="bshB1"
                     /locus_tag="VLD58_03225"
                     /inference="COORDINATES: protein motif:HMM:TIGR04001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019213 - deacetylase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol biosynthesis deacetylase BshB1"
                     /protein_id="HSB53334.1"
                     /translation="MPVHLLAIAAHRDDVELTCAGTLLKARDAGYSTGILDLTAGESG
                     SRGSADLRAEEARKAALVLGVAERRNAGLADAYLQNTDQARRAVVEQIRHFAPRVVIL
                     PFPVGRHPDHRIASELGRDACFLAGLSRYRADGAPHRPHKILYALAYREDPVKPSFVV
                     DISDQFERKMTSIQCYASQF"
     gene            complement(607..>1405)
                     /locus_tag="VLD58_03230"
     CDS             complement(607..>1405)
                     /locus_tag="VLD58_03230"
                     /inference="COORDINATES: protein motif:HMM:NF025616.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4349 domain-containing protein"
                     /protein_id="HSB53335.1"
                     /translation="EGHVAPGEAAPKLAADAARPPNQAPVATQTTWPGSGVPVTSMII
                     RTGNASIEIDSLEVGIRQIRTLAARVGGYVANSQITAGRQQTRSATLEIRVPADRFDQ
                     LVNGLTPLGKLEYVNVSAEDVSEEFTDLDARVSNGHRLEQRLIELIATRTGKLSDVLE
                     IERELARVREEIERMEGRMRYLKARAATSSLSVSIHEPVPVVGEQGTWSLLGEAVRVA
                     WRNLVSFIAAAIGLFGTLLPAGLLAAGALIGVRRLWRARQVPRPVAG"
BASE COUNT          204 a          493 c          484 g          224 t
ORIGIN      
        1 gaactggctg gcatagcact ggatggacgt catcttccgc tcgaactgat cgctgatatc
       61 caccacgaac gacggcttga ccgggtcttc ccggtacgcc agcgcgtaga ggatcttgtg
      121 cggccggtgt ggggcgccgt cggcgcggta gcgggagagt cccgcgagga agcacgcgtc
      181 gcgcccgagc tccgaggcta tccggtgatc gggatgccgg ccgaccggga aggggaggat
      241 caccacccgg ggggcgaagt gccggatctg ctcgaccacc gccctgcggg cctggtcggt
      301 gttctgcaga taggcatccg ccagcccagc gttgcgccgc tcggcaaccc ccagcaccag
      361 ggcggccttc cgggcctcct cggcccgcag atcagcgctg ccgcgagaac cgctctcgcc
      421 ggccgtcaga tcgagaatgc cggtgctgta tcccgcgtcc cgggccttga gcagggtccc
      481 ggcacaggtg agttccacgt cgtcacggtg ggccgcgatg gccaggagat ggacgggcat
      541 ccgcccaaga taacttggcc cggaagccgg agggtggcgt cccgaagggc gccacccgga
      601 ccgctgtcat ccggccaccg gacgtggcac ctgtctcgcg cgccacaggc gccgcacgcc
      661 gatcagggca cccgctgcca gcaggccggc cgggagcagg gtcccgaaga ggccgatcgc
      721 ggcagcgatg aagctcacga gattgcgcca ggccacccgt actgcctcgc ccagcaacga
      781 ccaggttccc tgctcgccca cgacgggcac cggttcgtgg atcgagacgc tcaggctgct
      841 ggtggcggcc cgagccttga ggtagcgcat ccgaccttcc atccgttcga tctcctcccg
      901 cacccgggcc agctcccgct cgatctccag cacatccgac agtttccccg tgcgggttgc
      961 gatcagctcg atcagccgct gctccagccg gtggccgttg ctgacccggg cgtccaggtc
     1021 ggtgaactct tcgctcacgt cctcggccga gacgttcacg tattcgagct tgcccagcgg
     1081 agtgagaccg ttcaccagct ggtcgaaccg gtcggccggg acccggatct cgagcgtggc
     1141 gctgcgggtc tgctgccgcc cggcggtgat ctgactgttt gcgacgtagc cgcccacccg
     1201 cgcggccagc gtgcggatct ggcggatacc cacctccagc gaatcgattt cgatgctggc
     1261 gttgccggtc cggatgatca tgctcgtgac ggggacgccg ctcccgggcc aggtcgtctg
     1321 ggtggccacc ggagcctgat tcggcggtcg cgcggcatcg gcggcgagtt tgggggcggc
     1381 ctcccctggg gcgacgtgcc cttcg
//
LOCUS       DATIFF010000220         1406 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_799628, whole genome shotgun sequence.
ACCESSION   DATIFF010000220 DATIFF010000000
VERSION     DATIFF010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1406
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_799628"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            246..1154
                     /locus_tag="VLD58_03235"
     CDS             246..1154
                     /locus_tag="VLD58_03235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011117168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HSB53336.1"
                     /translation="MSVSPSTMEERHAGSAVHHREPTGREIALLTTLAMLCFAGNSLL
                     CRLALRGGAIDAPSFTSVRLGSAALVMAVLARFGGQGRPHGGSWTSAVVLFGYAIAFS
                     LAYVKIGAGLGALLLFGSVQITMIVWGLVKGERPGAGEWSGLALALVGLLLLTNPSVS
                     GSPLGGMTLMLLAGVGWGVYSLRGRTSADPLQTTAANFARTVPLLLVLVAVSFLVERP
                     HLSTTGVAAGVASGAVTSGIGYVIWYRALSKLSALQAATVQLTVPVIAALGGVAFLGE
                     RITLRLLGAGALVLGGIAVVIFTRSR"
     gene            complement(1164..>1406)
                     /locus_tag="VLD58_03240"
     CDS             complement(1164..>1406)
                     /locus_tag="VLD58_03240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53337.1"
                     /translation="ERFLFTGDHLWWDEDDHRLDMGQGVCWYSWPEQLRSLERLRDFP
                     FQWVLPGHGQRFRAGSPEVMRASVAEVIQRLSRRAG"
BASE COUNT          181 a          500 c          487 g          238 t
ORIGIN      
        1 ggtcgggcac gagcgcttca cctcgttcga ccgcgtgagc cacgacggtc tcgaggtgat
       61 cgggaagttc cactccgagc agtggggcga cttcaagacc tacttccggt tccagctcgg
      121 tgccgagggg aagatccacc ggctggacat cggccaggtg gagtaggcat ctgccgggcg
      181 tgcacccggg ctcgttgccg gcgcctcgcc cggcctgttc cctgcgctga cggaaccgac
      241 cgctcatgtc cgtgagtcca tccaccatgg aggaacgaca cgcgggttcg gcggtacatc
      301 accgcgagcc caccggccgg gagatcgccc tgctcaccac cctggcgatg ctctgcttcg
      361 ccgggaactc gctcctctgc cggctggcgc tgcggggtgg ggcgatcgac gccccgagct
      421 tcacctccgt ccgcctggga tccgcagcgc tggtgatggc cgtcctggcg cggttcggag
      481 gacagggccg cccgcacggc gggagctgga cctccgccgt cgtgctcttc ggctacgcca
      541 tcgccttctc cctcgcctac gtcaagatcg gcgcggggct cggcgcgctt ctcctcttcg
      601 gatcggtgca gatcacgatg atcgtctggg ggctggtgaa gggcgagcgt cccggcgccg
      661 gcgagtggtc cggcctggcg ctggccctgg tgggactgct gctgctcacc aatccgtcgg
      721 tgtccggttc cccgctgggt ggcatgaccc tgatgctgct cgccggggtg ggctggggcg
      781 tgtactcgct tcgcggacgg acgtctgccg acccgttgca gaccacggcc gccaacttcg
      841 cccggacggt gcccctgctc ctggtgctgg tggcggtcag cttcctcgtc gagcggccgc
      901 acctctcgac gacgggagtg gcggcgggcg tcgcctcggg ggccgtcacc tccgggatcg
      961 gctacgtgat ctggtatcgc gcgctgtcga agctgagcgc gctgcaggcg gccacggtcc
     1021 agctcaccgt cccggtgatc gccgcgctgg gcggggtggc attcctcggc gagcggatca
     1081 ccctccgcct gctcggggcg ggcgctctgg tcctcggcgg catcgcggtg gtgatcttca
     1141 cccgcagccg ctgactccag aagctagccg gctctccgcg aaagccgctg gatgacctcc
     1201 gcaaccgacg ctcgcatcac ctccggcgac cccgcacgga agcgctggcc gtgaccgggc
     1261 agcacccact ggaaagggaa gtcccggagc cgctccagtg agcggagctg ctccggccac
     1321 gagtaccagc agacgccctg ccccatgtcg agccggtggt cgtcctcgtc ccaccagaga
     1381 tgatcgccgg tgaagaggaa cctctc
//
LOCUS       DATIFF010000221         1956 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1722989, whole genome shotgun sequence.
ACCESSION   DATIFF010000221 DATIFF010000000
VERSION     DATIFF010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1956)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1956)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1956
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1722989"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1122)
                     /locus_tag="VLD58_03245"
     CDS             complement(<1..1122)
                     /locus_tag="VLD58_03245"
                     /inference="COORDINATES: protein motif:HMM:NF013300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004560 - alpha-L-fucosidase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-fucosidase"
                     /protein_id="HSB53338.1"
                     /translation="MTFPSARLSRRDFLGAAGALAGWLTLPGLTRRGGPRPRPTEAQL
                     AWQREEWALFLHFGINTFTDREWGDGRENPVIFDPAALDARQWARTARSAGFRAMILT
                     AKHHDGFCLWPTRTTQHSVARSPWRSGGGDLVAEFVAACRTEGLRAGLYLSPWDRNAP
                     AYGDSPRYNDFYCDQLTELLTGYGDLAEVWFDGANGEGPNGRRQVYDWPRFFGLVRRL
                     QPGAVIFSDAGPDVRWIGNENGSAGDPNWSTVDPAVVPYPGAEGEAVTAMLQHGDPAG
                     SAWRPGETDTSIRPGWFHHPAEDGRVKTVEQLAEIHFASVGRNSKLLLNVPPARDGLL
                     HPTDVARLGAFRERIDALFEHDFASGIRPRPLAAAPQSTV"
     gene            complement(1215..1604)
                     /locus_tag="VLD58_03250"
     CDS             complement(1215..1604)
                     /locus_tag="VLD58_03250"
                     /inference="COORDINATES: protein motif:HMM:NF040487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-virulence regulator CigR family protein"
                     /protein_id="HSB53339.1"
                     /translation="MSRSATLLSLALLFGVTVPALAQKPDKGKGQHHTVAAAHVDSPF
                     SSHEREVIKLYYAEHRATARPLPPGIAKNLARGKPLPPGIAKQQVPQGLRAELPTRGG
                     MDVLIIGDRIVLVDPVGLVVDVLNDIF"
     gene            1739..>1956
                     /locus_tag="VLD58_03255"
     CDS             1739..>1956
                     /locus_tag="VLD58_03255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53340.1"
                     /translation="MARARTIPEAGVTRSAPGSRRERAGTIFGAMTEPPPPIEDRWAG
                     GPTPNADELDQLVYLSNLIGREPRLVQPG"
BASE COUNT          303 a          645 c          715 g          293 t
ORIGIN      
        1 gactgtcgac tgcggtgccg ccgcaagcgg gcggggtcgg atccccgagg cgaagtcgtg
       61 ctcgaacagc gcatcgattc gctcccggaa agcaccgagc cgcgccacgt cggtcgggtg
      121 gagcaggccg tcccgcgcag gtggcacgtt gagcagcagc ttcgagttcc ggcccacgga
      181 agcgaagtgg atctcggcga gttgctcgac cgtcttcact cggccgtcct ccgcgggatg
      241 atggaaccag ccgggacgga tggaggtgtc ggtctcgccg ggccgccagg ccgagccggc
      301 cgggtcgccg tgctgcagca tggcggtgac cgcctcaccc tcggctccgg gatagggcac
      361 caccgccggg tccacggtgc tccagttggg atctcccgcg gaaccgttct cgtttccgat
      421 ccagcggacg tcgggtccgg catcggagaa gatcaccgcc ccgggttgca gccggcggac
      481 cagcccgaag aagcggggcc agtcgtatac ctgccggcgg ccgttggggc cctccccgtt
      541 ggcgccgtcg aaccagacct cggccaggtc gccatatccg gtgagcagct cggtgagctg
      601 gtcgcagtag aagtcgttgt agcgcgggga gtctccgtac gccggtgcgt tgcggtccca
      661 gggagagagg taaaggcccg cgcgcaatcc ttcggtccgg caggcggcaa cgaactcggc
      721 caccagatcg ccaccgccgc tccgccaggg actccgcgcc accgagtgct gcgtggtccg
      781 ggtgggccag aggcagaagc cgtcatgatg cttggcagtc aggatcatgg cgcggaagcc
      841 tgcgcttcgc gccgtgcggg cccattgccg cgcgtccagg gcagccgggt cgaagatgac
      901 ggggttctcc cgtccgtcgc cccactcccg gtcggtgaag gtgttgatgc cgaagtggag
      961 gaacagtgcc cactcctccc gctgccaggc gagctgcgcc tccgtgggcc gcggcctcgg
     1021 gccgccgcgg cgggtcaagc ccgggagtgt cagccagccc gcgagcgcgc cggctgcgcc
     1081 gaggaaatca cggcgtgaga gtcgggcgga agggaaggtc atcggcctgg aaggtacagg
     1141 aagcggcctg gaggaaaaac cacagggccg cacggttgtg cggccctgca gaatcccact
     1201 gaagtgcgtc ggggtcagaa gatgtcgttc agcacgtcca ccacgagccc caccggatcg
     1261 accagcacga tgcggtcgcc gatgatcagt acgtccatgc cgcctcgggt cggcagctcg
     1321 gcgcgaaggc cctggggcac ctgctgcttc gcgatgcctg ggggcagagg cttgcccctt
     1381 gcgaggttct tggcgattcc cgggggcagc ggccgggccg tggcccggtg ctcagcgtag
     1441 tagagcttga tgacctcccg ctcgtgcgag gagaacggcg aatcgacatg ggccgccgcc
     1501 acggtatggt gctggccttt gcccttgtcg ggcttctggg ccagggcggg cacggttacg
     1561 ccgaacagga gagcgagcga aaggagcgtt gccgatctgc tcatggtgtc ctcggagtct
     1621 gtctggacga tgcaatctgt cgccgcgagg gctgggtccg gggacctgca tcaccgagat
     1681 ccggtgacgg cgggcccgcg ggccataccc ggatcaggaa tagtgcaggg ggcgtgccgt
     1741 ggcgcgggcg cgcacgatcc ccgaggcggg ggtcacacga tcggcgcccg ggtcgcgccg
     1801 ggagcgggcc ggtaccatct ttggcgccat gaccgaacca cctcccccga tcgaagaccg
     1861 ctgggccggc ggccctaccc cgaacgccga cgaactggac cagctggttt atctctccaa
     1921 cctgatcgga cgggagcccc gtctggtcca gcccgg
//
LOCUS       DATIFF010000222         1051 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_954114, whole genome shotgun sequence.
ACCESSION   DATIFF010000222 DATIFF010000000
VERSION     DATIFF010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_954114"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..782
                     /locus_tag="VLD58_03260"
     CDS             <1..782
                     /locus_tag="VLD58_03260"
                     /inference="COORDINATES: protein motif:HMM:NF014586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53341.1"
                     /translation="EIDMSPASMRMLQDIGHPFAEGKPVHDVTFENVQAGERTSHLFR
                     LANLHDGLVVGTGDLSELALGWCTYGVGDHMSHYSVNASVPKTLIQHVIRWVAQTGRL
                     GADASDTLLAILETEISPELVPGNEAGTGPAQGTEASIGPYELHDFALYYTLRFGYPP
                     PKVAFLAYTSWHDRDAGTWPDIPPSRRHTYGIGEIKANLAVFLRRFFQSSQFKRSCIP
                     NAPKVGSGGSLSPRGDYRAPSDSEATAWLGQLSLVPDHERV"
BASE COUNT          170 a          374 c          360 g          147 t
ORIGIN      
        1 ccgagatcga catgtcgccg gcctcgatgc ggatgctgca ggacatcggc caccccttcg
       61 ccgagggcaa gccggtccac gacgtcacct tcgagaacgt gcaggccggg gagcggacca
      121 gtcacctctt ccgcctcgcc aatctccacg acggcctggt cgtcggcacg ggggatctga
      181 gtgagctggc actgggctgg tgcacctacg gcgtgggcga ccacatgtcg cactactcgg
      241 tcaatgccag cgtgccgaag acgctgatcc agcacgtcat ccgctgggtg gcccagaccg
      301 ggcgcctggg cgcggatgcc agcgacaccc tgctggcgat cctggagacc gagatcagcc
      361 cggagctggt gccgggcaac gaggcgggga cggggccggc ccaggggacc gaggcgtcga
      421 tcggcccgta cgagctacac gacttcgcgc tctactacac gctgcgcttc ggctatccgc
      481 ctccgaaggt cgccttcctg gcctacacga gctggcacga ccgcgacgcc ggcacctggc
      541 ccgacatccc gccatccagg cgccacacgt atgggatcgg ggagatcaag gcgaacctgg
      601 cggtctttct ccggcgcttc ttccagtcga gccagttcaa gcggagctgc atcccgaacg
      661 cgccgaaggt cggctcggga ggctcgctgt cgccgcgggg cgactaccgg gcgccgagcg
      721 acagcgaggc gaccgcctgg ctgggccagc tctccctcgt gcccgatcac gagcgcgtgt
      781 gagagaatcg ccctcgagcc gtaccctcgg ggaggttcgg aaggaatcga agcgcgcagc
      841 tcgtcccccg gcccgaccga ggctgatatc aatcgaccgc cctcgccggg gtccctcccc
      901 tcaccccggt gggcggggag gggccggggg cgactgacgc cggccgctca gtagtaccgc
      961 cagtggccgg ggtaccagac ccactggtac ccgttccaca cccactggcc gggaacccac
     1021 accggcgccg gtggcgggta gtacgggtag g
//
LOCUS       DATIFF010000223         2013 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_492596, whole genome shotgun sequence.
ACCESSION   DATIFF010000223 DATIFF010000000
VERSION     DATIFF010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2013
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_492596"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..211
                     /locus_tag="VLD58_03265"
     CDS             <1..211
                     /locus_tag="VLD58_03265"
                     /inference="COORDINATES: protein motif:HMM:NF019229.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ASPIC/UnbV domain-containing protein"
                     /protein_id="HSB53342.1"
                     /translation="ARVQVKAGGQTLTQWNDGKSGYLSQSSMPLYFGLGDARKIDSVE
                     VTWPSGKTQTVAGPKANGEIEVVEK"
     gene            complement(218..832)
                     /locus_tag="VLD58_03270"
     CDS             complement(218..832)
                     /locus_tag="VLD58_03270"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HSB53343.1"
                     /translation="MAALRRGLIWTLLVVALVAVVTATAVDRLRRPEPPPVFDPVPAF
                     SLTNRDGRTVRLQDLKGKPWIADFVFTRCPASCPLMTARMAKLNRELPDDLDVRLVSF
                     SVDPEHDTPQVLQRYAESYKAPDRWLFLTGGKDEMYKLSRQGFKLGIDIPPPSAPGAP
                     APEPILHSTRFVLVDGQGRIRGYYDGFDEESMKKLVRDLEAVQG"
     gene            complement(840..1733)
                     /gene="cyoE"
                     /locus_tag="VLD58_03275"
     CDS             complement(840..1733)
                     /gene="cyoE"
                     /locus_tag="VLD58_03275"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: protein motif:HMM:TIGR01473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HSB53344.1"
                     /translation="MRAGTADERPVPIAARDLWEMTKPGITVMVVLTAGLGFLLGEQG
                     SFPFLLLVHTLLGTGLVSAGASVLNHVLERDTDALMQRTANRPLPTGRMDPDTALLFG
                     VVLAVAGLADLALAVNLLTALLGAAALAGYVFVYTPLKRISSFATVIGAIPGAIPPMM
                     GWAAVRNELDVAAWVLFGILFFWQLPHFLAIAWLCREDYARGGFPMLPVLDPEGTRTG
                     RQAILYGAALVPMSLLPSLLGLMGTVYFVGALAFGLAYLGFSFGFAAVRSNPGARRLM
                     LASLLYFPALLMIMLLDRVVS"
     gene            complement(1832..>2013)
                     /locus_tag="VLD58_03280"
     CDS             complement(1832..>2013)
                     /locus_tag="VLD58_03280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53345.1"
                     /translation="LDLNGTRFANPFLPLVRFSVGTGFQVIAAHQRRHLWQAGRIREN
                     PRFPAPDVQSPLGSR"
BASE COUNT          364 a          636 c          770 g          243 t
ORIGIN      
        1 cgccagggtc caggtcaagg ccggcgggca gaccctcacc cagtggaacg acggcaagtc
       61 gggctacctc tcgcagagct cgatgccgct ctacttcggc ctcggggacg cccggaagat
      121 cgattccgtc gaggtcacct ggccctccgg gaagacccag acggtggccg ggccgaaggc
      181 gaacggggag atcgaggtcg tggagaagta gaagtagtta tccctggacg gcttccaggt
      241 cgcgcaccag cttcttcatc gactcctcgt cgaacccgtc gtagtagccg cggatgcgcc
      301 cctggccgtc caccagcacg aagcgggtgc tgtggaggat gggctcgggc gccggcgcgc
      361 cgggggcgga cggcgggggg atgtcgatgc ccagcttgaa gccctggcgg gagagcttgt
      421 acatctcgtc cttgccgccg gtcaggaaga gccagcggtc cggggccttg tacgactcgg
      481 cgtagcgctg gagcacctgg ggggtgtcat gctccggatc gaccgagaag gagacgagcc
      541 gcacgtcgag atcgtccggc agctcccggt tgagcttggc catccgcgcc gtcatcagcg
      601 ggcaggaggc cgggcagcgg gtgaagacga agtcggcgat ccacggcttg cccttgaggt
      661 cctggaggcg gaccgtgcgg ccgtcccggt tggtcagcga aaaggctggc accggatcga
      721 agacgggggg cggctcgggg cgccgcagac ggtcgacggc ggtcgccgtc accaccgcca
      781 ccagggcgac caccagcagg gtccagatca gaccgcggcg cagcgcggcc atcggggctt
      841 caggagacca cccggtcgag cagcatgatc atgagcaggg ccgggaagta gaggagcgac
      901 gccagcatca gccggcgcgc gccgggattg gagcgcaccg ccgcgaagcc gaacgagaac
      961 cccaggtagg ccaggccgaa ggcgagcgcg cccacgaaat agacggtacc catcaggccg
     1021 agcagggagg ggagcagcga catcggcacc agcgccgcgc cgtagaggat cgcctgccga
     1081 cccgtgcggg ttccctcggg atcgagcacc ggcagcatgg ggaagccgcc gcgggcgtaa
     1141 tcctcgcggc agagccaggc gatggcgagg aagtgcggga gctgccagaa gaacaggatg
     1201 ccgaacagca cccaggcggc gacgtcgagc tcgttgcgca cggcggccca gcccatcatc
     1261 ggcgggatgg cgcccgggat ggcgccgatc accgtggcga aggagctgat ccgcttgagc
     1321 ggcgtataga cgaagacgta gccggcgagc gccgcggcgc cgagcagggc cgtcagcagg
     1381 ttcaccgcca gggcgaggtc ggcgaggccg gccacggcca gcaccacgcc gaacaggagg
     1441 gcggtgtcgg ggtccatccg tcccgtaggc agcggccggt tggcggtgcg ctgcatcagg
     1501 gcgtcggtat cccgctcgag gacgtggttg aggaccgagg cgccggccga gaccagcccg
     1561 gtgccgagca gggtatggac gagcaagagg aacgggaagg agccctgctc gccgagcagg
     1621 aaccccaggc cggccgtgag caccaccatc acggtgatgc ccggcttggt catctcccag
     1681 agatcgcgcg ccgcgatggg gaccggccgc tcgtcggccg tgccggccct caagatgccg
     1741 ctccgcgcca tacggactta cataggaaaa agagtctgtt catgaaaagg ctcgcgtccg
     1801 ggcgccgggg aggcgccggc ggcgggcaag tctatcgcga accgaggggg gattgcacgt
     1861 cgggggccgg gaaccgcgga ttctccctga tccgcccggc ctgccagagg tgccggcgct
     1921 gatgggcggc gatcacctgg aagccggtgc cgacggagaa gcggaccagg gggaggaagg
     1981 gattcgcgaa ccgcgtgccg ttgaggtcga gcc
//
LOCUS       DATIFF010000224         1267 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_646177, whole genome shotgun sequence.
ACCESSION   DATIFF010000224 DATIFF010000000
VERSION     DATIFF010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1267
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_646177"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..716)
                     /locus_tag="VLD58_03285"
     CDS             complement(<1..716)
                     /locus_tag="VLD58_03285"
                     /inference="COORDINATES: protein motif:HMM:NF024603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HSB53346.1"
                     /translation="MRVTARKAAAALALLALIACAKMGAPPGGPPDKVAPKLLATVPE
                     SVGVYPGWKRDVEFRFDEIVSEGSSPNQGLGTGDLEKLILLSPSSKVPVIHWHRDRIT
                     VRPKEGWKPNRVYRIELLPGIADLRRNRLDTTTVLTFSTGGAVPTDTLRGLAIDWVQG
                     RVAVGALVELILRPDSLVYRAITDSAGRFDVGPLPSGEYLVYGVIDQNHDQRRGRRES
                     YDSAVVAAGKSVPALWLIPR"
     gene            complement(707..>1267)
                     /locus_tag="VLD58_03290"
     CDS             complement(707..>1267)
                     /locus_tag="VLD58_03290"
                     /inference="COORDINATES: protein motif:HMM:NF019869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HSB53347.1"
                     /translation="EALWQRLPGRIAGATIMNAPWPRPDRRALDASAERDFALVQELV
                     GAVRQIRAEYGVEPGKQVGLRISRRHAAFVEEEGTIARLAKIGQVSYGDPLPEPGANA
                     VLQDGTSLYIALGELVDIRKECERLGNEFARLSQLIQSQEAKLANQNFVSRAPADVVG
                     REREKLASMKQQVEAIADKRQQLGCG"
BASE COUNT          173 a          427 c          459 g          208 t
ORIGIN      
        1 tcgcggggta tgagccagag cgcgggcacc gacttgccag ccgccaccac cgccgagtcg
       61 tagctctcgc gccgaccccg gcgctggtca tgattctggt cgatgacgcc gtacaccagg
      121 tactcgccgc tgggcagcgg acccacatcg aaccggccgg ccgagtcggt gatcgcgcgg
      181 tacaccaggc tgtcggggcg gagaatcagt tcgaccaggg cgccgacggc cacccggccc
      241 tgcacccagt cgatcgccag accgcggagg gtgtcggtgg gaacagcgcc gccggtgctg
      301 aaggtgagca ccgtggtggt gtcgagccgg ttgcggcgga ggtcggcgat gccggggagg
      361 agttcgatcc ggtagacccg gttcggtttc catccctcct tcgggcgcac cgtgatgcgg
      421 tcgcggtgcc agtggatcac cgggaccttg ctgctgggtg acagcaggat cagcttctcg
      481 agatcgccgg tgccgagccc ctggttgggg gagctgccct cgctcacgat ctcgtcgaag
      541 cggaattcga cgtcgcgttt ccagccggga tagacgccga ccgactcggg aacggtggcg
      601 agcagcttgg gggcgacctt gtcggggggg ccgcccgggg gcgctcccat cttggcgcag
      661 gcgatcaggg ccagcagggc gagagcggcg gcggctttcc gggcggtcac ccgcacccca
      721 gctgctgccg cttgtcggcg atggcctcga cctgctgctt catgctggcg agtttctcgc
      781 gctcccggcc cacgacgtcg gcgggcgccc ggctcacgaa attctggttg gcgagcttcg
      841 cttcctgcga ctggatcaac tgggagaggc gggcgaactc gttccccagc cgctcgcatt
      901 ccttcctgat gtccaccagt tcgcccagcg cgatgtagag cgaggtcccg tcctggagca
      961 ccgcgttggc gccgggctcc ggcagggggt cgccatagct gacctggcct atcttcgcga
     1021 gccgggcgat ggtgccttcc tcttcgacga atgcggcatg ccggcgcgag atccggagcc
     1081 ccacctgctt gcccggttcc accccatact cggcccggat ctgccggacc gcgcccacca
     1141 gctcctgcac cagggcgaag tcgcgttctg cgctggcgtc gagggcgcgg cgatcggggc
     1201 ggggccaggg cgcattcatg atggtggcgc cggcgatgcg gccggggaga cgctgccaga
     1261 gggcctc
//
LOCUS       DATIFF010000225         1079 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_799911, whole genome shotgun sequence.
ACCESSION   DATIFF010000225 DATIFF010000000
VERSION     DATIFF010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_799911"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..668
                     /locus_tag="VLD58_03295"
     CDS             <1..668
                     /locus_tag="VLD58_03295"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB53348.1"
                     /translation="SGTAHELNNPLAGIAAMAQALLLDKSATPDILQALETIRREAMR
                     AARIVTDLLTFARLRPLQRREVNLNQLVRDTFAATPGLGAYGVVWTLGLDPTLPALVA
                     DPDQVRQVITNLLVNATQAMSDAERRDGLVRTWSTPDWIGLEVLDTGPGIAPDVLSRI
                     FEPFFTTKAHRQGTGLGLSISHGIIRAHGGEIHGENRPEGGARFTFQLPRDPTRIART
                     TDA"
     gene            661..>1079
                     /locus_tag="VLD58_03300"
     CDS             661..>1079
                     /locus_tag="VLD58_03300"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB53349.1"
                     /translation="MPDSVLLIDDDVTILRAVGTVFERAGYEVARELDAEAGLAAYDR
                     LRPEVVVLDLHLPGMDGLQALSRFKERNAAVILLTGHGDVATAVQAMQLGAENFLTKP
                     MDLEHLLAAVARVADKVRLRRLNELLLLRGAPGEAGL"
BASE COUNT          167 a          398 c          351 g          163 t
ORIGIN      
        1 tgtcgggcac cgcccacgaa ctcaacaatc cgctggccgg catcgccgcg atggcccagg
       61 cgctgctgct cgacaagtcg gcgacgccgg acatcctcca ggcgctcgag accatccgcc
      121 gcgaggcgat gcgggcggcc cggatcgtga ccgacctgct cacctttgcg cggctgcgtc
      181 cgctccagcg gcgcgaggtg aacctcaatc agctggtgcg cgacaccttc gccgccacgc
      241 ccgggctcgg cgcctatggc gtggtgtgga ccctgggact cgatcccacc ctgccggccc
      301 tggtcgccga tcccgaccag gtccgccagg tgatcaccaa cctgctggtc aacgccactc
      361 aggccatgag cgatgccgag cggcgcgatg gcctggtacg gacctggtcg accccggact
      421 ggatcgggct ggaagtgctc gacaccggtc ccggcattgc ccccgacgtt ctgagccgca
      481 tcttcgaacc gttcttcact accaaggccc accgccaggg caccggcctg ggcctgtcga
      541 tctcccacgg gatcatccgc gcccacgggg gagagattca tggggagaac cgtccggaag
      601 gcggcgcccg attcacgttc cagttgccac gggacccaac ccggatcgcg aggaccaccg
      661 atgcctgatt cggtactcct gatcgatgat gatgtcacca tcctccgcgc agtcggcacc
      721 gtgttcgagc gggccggcta cgaggtggcg cgcgagctcg acgccgaggc cggactcgcg
      781 gcctacgacc ggctccgccc cgaggtggtc gtcctcgatc tccatctgcc cggcatggac
      841 gggctccagg cgctctcgcg cttcaaggaa cggaatgccg ccgtcatcct cctcaccggc
      901 catggcgatg tcgccaccgc ggtgcaggcg atgcagctcg gcgccgagaa cttcctcacc
      961 aagccgatgg acctcgagca cctgctggca gcggtggcgc gggtggccga caaggtccgg
     1021 ctcaggcggc tgaacgagct gctgctcctc cgcggcgcgc cgggcgaggc cggactcga
//
LOCUS       DATIFF010000226         1577 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1877373, whole genome shotgun sequence.
ACCESSION   DATIFF010000226 DATIFF010000000
VERSION     DATIFF010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1577
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1877373"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..344)
                     /locus_tag="VLD58_03305"
     CDS             complement(<1..344)
                     /locus_tag="VLD58_03305"
                     /inference="COORDINATES: protein motif:HMM:NF014658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MqnA/MqnD/SBP family protein"
                     /protein_id="HSB53350.1"
                     /translation="MRVGRIPWINCYPVYGAVDRGLVRLPGELVSGTASELNDLLATG
                     ELQVSVVSAVEYARNAAAYHLLPDLAITCDGPVHSVALFSRRPVADLDARTVLLTASS
                     RTSVLLLELLCR"
     gene            complement(341..>1577)
                     /gene="mqnE"
                     /locus_tag="VLD58_03310"
     CDS             complement(341..>1577)
                     /gene="mqnE"
                     /locus_tag="VLD58_03310"
                     /inference="COORDINATES: protein motif:HMM:TIGR03700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminofutalosine synthase MqnE"
                     /protein_id="HSB53351.1"
                     /translation="LPRFLVPTVQGDTMAGELDPTRLRDPALRAIAQKIDAGERLTPP
                     EGVALYATADLLGLGLLADAANRRRNGDRVFFSANQHINPTNVCILRNTCVFCSFARM
                     PKEDGAYTRSLEEVFAEAEQARGMPTSEFHIVGGLHPKLRLSYYTDMIRGLKERHPQI
                     HIKALTAVEIAHLARIERTSEREVLQALKDAGLTSLPGGGAEVFSSAVRATIAERKLT
                     GEEWLRVHRVAHELGIPTNCTMLYGHVETAEDRIAHLGMLRELQDETGGFLTYIPLAY
                     HPDHNELGEEMGRVGTATTGYEDLKNIAVARLFLDNVPHVKTHWPMVTPFLSQIALAF
                     GCDDVEGTVVYERIYHEAGAQTAMHMSYLELVRLIRGAGKQPVERDSLYRAVRDEFDE
                     PPPEPSLRRGAALPVVHAA"
BASE COUNT          234 a          529 c          559 g          255 t
ORIGIN      
        1 tgccggcaga gcagctcgag cagcagcacc gaggtacgcg agctggcggt cagcagcacc
       61 gtgcgagcat cgaggtcggc aaccgggcgg cgggagaaca gcgccacgct gtgcaccggt
      121 ccgtcgcagg tgatggcgag gtcgggcagc agatggtagg cggcggcgtt ccgggcgtac
      181 tctaccgccg acaccacgct cacctgcagc tccccggtgg cgagaaggtc gttgagctcg
      241 gaggccgtac ccgacaccag ctcgcccggg agccgtacca gcccgcggtc gaccgccccg
      301 tagaccgggt agcagttgat ccagggaatg cggccgactc tcatgccgcg tgcaccaccg
      361 gcagtgccgc gccccggcgg agcgacggct ccggcggcgg ttcgtcgaac tcgtcgcgta
      421 ccgcccggta gaggctgtcg cgctccaccg gctgcttccc cgccccgcgg atcaaccgca
      481 ccagctcgag gtaggacatg tgcatggcgg tctgggcgcc ggcctcatga tagatccgct
      541 cgtagaccac ggtgccctcg acgtcgtcgc agccgaaggc gagcgcgatc tgggagagga
      601 acggcgtcac catgggccag tgggtcttca cgtgggggac gttgtcgagg aacagtcgcg
      661 cgacggcgat gttcttgagg tcctcatacc cggtcgtggc ggtcccgacc cggcccatct
      721 cctcgcccag ctcgttgtgg tcggggtggt acgcgagcgg gatgtaggtg agaaacccgc
      781 cagtctcgtc ctggagctcc cgcagcatgc cgaggtgcgc gatccggtct tccgccgtct
      841 ccacgtggcc gtagagcatg gtgcagttgg tggggatccc cagctcgtgg gccacccggt
      901 ggacccgcag ccattcctcg ccggtgagct tccgctcggc gatggtggcc cgcaccgcgc
      961 tgctgaacac ttcggcgccg ccaccgggca ggctggtgag ccccgcgtcc ttcagcgcct
     1021 ggagcacctc gcgctcgctg gttcgctcga tccgggcgag atgggcgatc tcgaccgccg
     1081 tgagcgcctt gatgtggatc tgcgggtggc gctccttgag cccgcggatc atgtcggtgt
     1141 agtacgacag acgaagcttc gggtgcagcc cgcccacgat gtggaactcg ctggtcggca
     1201 tcccccgcgc ctgctccgcc tcggcgaaca cctcctccag cgaccgggtg taggcgccgt
     1261 cctccttggg catccgcgcg aaggaacaga acacgcaggt attccggagg atgcagacgt
     1321 tggtcggatt gatatgctgg ttggcggaga agaagacccg gtcgccgttg cggcgccggt
     1381 tggcggcgtc ggccagcagc cccaggccca gcaggtcggc cgtggcgtag agcgccaccc
     1441 cttcgggggg cgtcaaccgc tcccccgcgt cgatcttctg ggcgatcgcc cggagggcag
     1501 ggtcgcggag gcgcgtgggg tcgagctcgc cggccatcgt atctccttgc acggtaggca
     1561 ctaagaatct tggtaat
//
LOCUS       DATIFF010000227         1330 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_31684, whole genome shotgun sequence.
ACCESSION   DATIFF010000227 DATIFF010000000
VERSION     DATIFF010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1330
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31684"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1172)
                     /locus_tag="VLD58_03315"
     CDS             complement(<1..1172)
                     /locus_tag="VLD58_03315"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HSB53352.1"
                     /translation="MQPIGRAVRFGAAALALLAGAVSHLAAQGITSAAVTGRVSSETR
                     GTVENAIVALINTSTGARLQTTTSTAGRFNFENVTPGGPFTIEVRAIGFQLASKTGVM
                     LALGQRYVQDFVLKQQIVTLEELTVVAATNPLINAGRTGAAQTVTDTTIQRYPLLGRN
                     FTDLIRTSPQVVNGTGIAGQNSRFNTILIDGGVNNDIFGLSSSGTPGGTAGAKPLSVE
                     ALQEFQILSAPFDIRQGSFSGGLINGVTKSGTNRFHGSAFGYLQRPELVGKDTAGIRV
                     GTFSIKQYGGTLGGPIIKNKLLFFGSADLQTSITPFFGPEVSEPATHVTLAQANQIQE
                     IVKTKYGFDPGGPTPPQNLNKPDKNFFGKMTWQAGGSSQMEVSYNYTRATQDVFNR"
BASE COUNT          191 a          420 c          480 g          239 t
ORIGIN      
        1 ctgcggttga agacgtcctg ggtggcccgg gtgtagttgt aggagacctc catctgggag
       61 ctcccgccgg cctgccaggt catcttcccg aagaagttct tgtcgggctt gttgaggttc
      121 tgcggcggcg tcggcccgcc cgggtcgaag ccgtacttcg tcttgacgat ctcctggatc
      181 tggttggcct gcgccagcgt cacgtgcgtc gccggctcgg acacttcggg tccgaagaac
      241 ggcgtgatcg acgtctggag gtcggcgctc ccgaagaaga ggagcttgtt cttgatgatg
      301 gggccgccga gggtgccgcc gtactgcttg atgctgaagg tgcccacccg gatccccgcc
      361 gtgtccttgc cgaccagctc cggccgctgc aggtagccga aggccgaccc gtggaacctg
      421 ttggtgccgg acttggtcac gccgttgatc agcccgccgg aaaagctccc ctggcggatg
      481 tcgaacggcg cggagaggat ctggaactcc tggagcgcct cgaccgagag cggcttggcg
      541 ccggcggtgc cgcccggcgt gccgctggag gagaggccga agatgtcgtt gttgacgccg
      601 ccgtcgatca ggatcgtgtt gaagcggctg ttctggccgg cgatcccggt gccgttcacc
      661 acctggggac tggtccggat caggtcggtg aagttgcggc cgaggagcgg gtagcgctgg
      721 atggtggtgt cggtgacggt ctgggcggcg ccggtccgtc ccgcgttgat cagcgggttc
      781 gtggcggcga cgacggtgag ctcctcgagc gtcacgatct gctgcttgag cacgaagtcc
      841 tggacgtatc gctggcccag ggcgagcatg accccggtct tcgaggccag ctggaacccg
      901 atggcccgca cctcgatcgt gaacggcccg ccgggggtga cgttctcgaa gttgaaacgg
      961 cccgccgtgc tcgtggtggt ctggagccgg gcgccggtgg aggtgttgat cagcgcgacg
     1021 atggcgttct ccaccgtccc ccgggtctcg gagctcaccc gcccggtgac cgccgcgctg
     1081 gtgatgccct gggccgcgag gtgagacacc gcgccggcca gaagggccag tgcggcggcc
     1141 ccgaatcgaa ctgcccgccc gattggctgc atggaacgaa ctcccgaatc gtgatggatg
     1201 ctgcggtcac cggctcgccc ggacttcggg ccaccggtat ctgtcatgct gcgcgggatg
     1261 ggatgccgcc gaaccccgaa cgggggctca gccgccggaa aattacccct ccgccccgcc
     1321 aaatcaagca
//
LOCUS       DATIFF010000228         1007 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_186016, whole genome shotgun sequence.
ACCESSION   DATIFF010000228 DATIFF010000000
VERSION     DATIFF010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186016"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(82..>1007)
                     /gene="pstA"
                     /locus_tag="VLD58_03320"
     CDS             complement(82..>1007)
                     /gene="pstA"
                     /locus_tag="VLD58_03320"
                     /inference="COORDINATES: protein motif:HMM:TIGR00974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HSB53353.1"
                     /translation="PDHDHGQRGRPAPDLAGLARPGRKARMNRRVLRRWISNAMVGLM
                     LLAVVIAVLPLFFILANLVIKGAGSLSVGFFTRMPVPVGETGGGVAHAIVGTLIIVGM
                     ASLVGLPLGIGAGIYCAEYPGTRLAKITRFLSDVMNGTPSIVVGVFAWTLIVARMKHF
                     SALAGSAALAILMIPMVMRTTEELIKLVPHSLREAALALGYPRWRTTLQIILRTALPG
                     IVTGSLLSVARVAGETAPLLFTALGSQYLGFDVLQPMAALPLTVYQYATGPYEEWHQF
                     AWAAALVLILVVLVLSVGARLATRRRFNLNG"
BASE COUNT          181 a          360 c          331 g          135 t
ORIGIN      
        1 aacgtcagcg agacgtcgcg caccgcggtg aacttgccgt acatggccgt cagccgctcg
       61 gtggccagcc ggaccacggg ttcagccatt gaggttgaac ctccggcggg tcgcgagccg
      121 ggcacctacg ctcagcacca gcaccaccag gatcagcacc agcgcggcgg cccaggcgaa
      181 ctggtgccac tcctcgtatg ggccggtggc gtactggtac acggtgaggg gcagcgccgc
      241 catcggctgc agtacatcga aaccgaggta ctggctcccc agggcggtga agaggagcgg
      301 cgcggtctcg cccgccacgc gggccaccga gagcaggctg ccggtgacga tacccgggag
      361 cgcggtccgc aggatgatct gcagggtagt ccgccagcgg ggatacccca gcgcgagcgc
      421 cgcctcccgc agggaatgcg gcaccagctt gatgagctcc tcggtggtgc gcatgaccat
      481 cgggatcatc aggatcgcca gcgccgcgct gcctgccagc gcggagaagt gcttcatcct
      541 ggccacgatc agggtccacg cgaacacccc gaccacgatc gacggcgtgc cgttcatcac
      601 gtcggacagg aaccgggtga tctttgccag cctcgtgccg ggatactcgg cgcagtagat
      661 ccccgccccg attcccagcg gcagcccgac caggctcgcc atcccgacga tgatcagggt
      721 ccccacgatc gcgtgggcta ccccgccccc cgtctcgccg acgggcaccg gcatccgggt
      781 gaagaacccc accgacaggc tccccgctcc cttgatcacc aggttggcca ggatgaagaa
      841 cagcggcagc acggcgatca ccacggccag gagcatcagc ccgaccatcg cgttgctgat
      901 ccagcggcgg aggacccggc ggttcatccg cgctttccgc cctggccgcg cgagacccgc
      961 cagatcagga gccgggcggc cgcgttgacc atgatcgtga tcaggaa
//
LOCUS       DATIFF010000229         1218 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_339293, whole genome shotgun sequence.
ACCESSION   DATIFF010000229 DATIFF010000000
VERSION     DATIFF010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_339293"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(117..>1218)
                     /locus_tag="VLD58_03325"
     CDS             complement(117..>1218)
                     /locus_tag="VLD58_03325"
                     /inference="COORDINATES: protein motif:HMM:NF025167.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HupE/UreJ family protein"
                     /protein_id="HSB53354.1"
                     /translation="GPAIQRALDVIAQDIMLWEEERRLVPSSAVGRLQLPSDRSFDKY
                     RDALADTAGTSAPGTVIYFDQGFLDAHLTYPIGAARSKFSIRTAVFPEVAGFLKLAIR
                     YLPPGEEGRAMVITSRSGRVSLNPAWYQAAASFVGLGVTHILGGVDHLLFLLCLVIPF
                     AGVRKVIPIITAFTLAHSFTLIGSAYDLGPSGAWFPPFVETAIAASIVYMALENIIGP
                     DLGRRWLLTGLFGLVHGFGFSYGLRENLQFAGRHLLVSLFSFNVGIEIGQLLVLAVML
                     PVLSILRRHALTGRVGIIILSALVAHTGWHWMIDRGEVLWKTEWPRVDAAALATLARW
                     VAGILLAAGAVHLARRHAGAFFSRRLAQKRAS"
BASE COUNT          230 a          399 c          431 g          158 t
ORIGIN      
        1 gggctcgatg ccggagccag tctcgcgggc ccaccaggcc aaggcgctcc accttcaccc
       61 cttccggcgc caacctcttg gatccacggt gggaaggcgc ggatccagcc gccggctcag
      121 gatgcgcgct tttgggccag cctgcgcgag aagaacgcac cggcgtgccg ccgcgccagg
      181 tggacggcgc cggcagccag gaggataccc gcgacccagc gcgcgagcgt tgccagcgcc
      241 gcggcgtcga cgcgcggcca ctcggtcttc cagaggactt ctccgcgatc gatcatccag
      301 tgccaccccg tgtgggcgac gagcgccgag aggatgatga tgccgacccg gccggtgagc
      361 gcgtgccgcc ggaggatcga cagcaccggc agcatcaccg ccagcacgag gagctgcccg
      421 atctcgattc cgacgttgaa agagaacagc gacaccagga gatgccgccc ggcgaactgg
      481 aggttctccc tcagtccgta cgagaagccg aaaccgtgca ccaggccgaa gagcccagtg
      541 agcagccagc gccgccccag atcggggccg atgatgttct ccagcgccat gtacacgatc
      601 gatgccgcga tcgcggtctc cacgaatggt gggaaccatg cgccggatgg ccccaggtcg
      661 taggccgatc cgatcagcgt gaacgaatgg gcaagggtga aggcggtgat gatcgggatg
      721 accttccgga cgccggcgaa ggggatgacg aggcagagga ggaagagcag gtgatcgact
      781 cccccgagaa tgtgggtgac gccgagtccc acgaagctcg cggccgcctg gtaccaggcg
      841 gggttcaagg aaacccggcc cgaccggctg gtgatcacca tcgcccgccc ttcctcgccc
      901 ggcggaaggt agcggatggc cagcttgagg aagccggcca cctcgggaaa cacggcagtg
      961 cgaatggaga acttcgagcg cgcggcgccg atcggatagg tcagatgcgc gtcgaggaat
     1021 ccctgatcga agtagatgac ggtgccgggg gccgaagtgc ccgcggtatc ggcgagcgcg
     1081 tcccggtact tgtcgaagga gcggtccgag ggcagctgca gtcggccgac ggcgctcgag
     1141 ggaaccagcc gccgctcctc ctcccagagc atgatgtcct gggcgatcac gtcgagggcc
     1201 cgctggatgg cgggcccc
//
LOCUS       DATIFF010000230         1389 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_493570, whole genome shotgun sequence.
ACCESSION   DATIFF010000230 DATIFF010000000
VERSION     DATIFF010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1389
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_493570"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..204
                     /locus_tag="VLD58_03330"
     CDS             <1..204
                     /locus_tag="VLD58_03330"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: protein motif:HMM:NF013327.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HSB53355.1"
                     /translation="GQGLAFGLVLGVIGQIGDLAESLFKREVGLKDSSSLIPGHGGVL
                     DRFDSLYFVLPVSAAMYRLFGVL"
     gene            204..1322
                     /gene="dxr"
                     /locus_tag="VLD58_03335"
     CDS             204..1322
                     /gene="dxr"
                     /locus_tag="VLD58_03335"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HSB53356.1"
                     /translation="MRRREFRQPRGVAILGSTGSIGKSALAVLARQRDCFRVVALTAR
                     DNRSALDRQAAEWRPLLSGLVSERGPALLVEAATHPDVDIVLNAVVGSAGLDATLAAL
                     RVGKRVALANKEALVMAGDLVRAASEEGGGELVPVDSEHSAVLQCVAGREAGLARLIL
                     TASGGPFRDWEPERIARATVAEALNHPVWRMGNKVTVDSATLANKALELIEAHHLFGL
                     AYDALDVVVHPQSIVHAFAEFCDGSVIGQLAYPSMELPILYALTHPDRLPDTGVRRFD
                     PVAVGALTFEPVRAEVFRAFRAGVAAGREGGTAPAAFNAANEEAVAAFLAGGIPFGRI
                     AETIERVLDEHRNEPVRDLDTVRAADVRARVRAREVLA"
BASE COUNT          174 a          469 c          514 g          232 t
ORIGIN      
        1 ggccaggggc tcgccttcgg actggtgctc ggcgtgatcg ggcagatcgg ggacctggcc
       61 gagtctctgt tcaagcgcga agtgggcctc aaggattcct cctcgctgat cccgggccac
      121 gggggtgtgc tggaccggtt cgactcgctc tatttcgtcc tcccggtttc cgccgcgatg
      181 taccggctgt tcggggtgct gtgatgcggc gacgcgagtt ccggcagccg cggggggtgg
      241 cgatcctcgg gtccacaggc tcgatcggca agagcgccct cgctgtgctg gcacggcagc
      301 gggactgctt ccgggtcgtg gccctcaccg cgcgggacaa ccgctccgcc ctggaccgtc
      361 aggccgcgga gtggcggccg ctcctctccg ggcttgtgag cgagcgggga ccggcactcc
      421 tggtggaggc ggcgactcat ccggacgtgg acatcgtcct gaacgcggtc gtgggctcgg
      481 caggcctcga cgccacgctg gccgcgcttc gggtcggaaa gcgggtcgcc ctggccaaca
      541 aggaggccct ggtcatggcc ggcgacctgg ttcgggcggc ctccgaggaa ggcggcgggg
      601 agctggtccc ggtggactcc gagcacagcg ccgtgctgca gtgcgtggcc gggcgcgagg
      661 ccggactggc gcgcctcatt ctcaccgcct cgggcgggcc cttccgggac tgggagcctg
      721 agcgaatcgc gcgggccacc gtggccgagg cgctcaacca cccggtatgg cgaatgggga
      781 acaaggtgac ggtggacagc gccacgctcg cgaacaaggc gctggagctg atcgaggccc
      841 accatctctt cgggctggcc tacgatgccc tggacgtggt ggtccatccc cagagcatcg
      901 ttcacgcctt cgccgagttc tgtgacggga gtgtgatcgg ccagctggcc tacccctcga
      961 tggagctgcc gatcctctac gccctgactc atcccgaccg cctccccgac accggggtgc
     1021 gccgcttcga tccggtcgcg gttggcgcgc tcaccttcga gccggtgcgg gccgaggtgt
     1081 tccgcgcctt tcgggccggg gtggccgcgg gccgcgaggg cggcaccgcc ccggccgcgt
     1141 tcaacgccgc caacgaggag gcggtcgccg ccttcctcgc cggcggcatt ccgttcggcc
     1201 ggatcgcgga gaccatcgaa cgggtgctgg acgagcaccg gaacgagccg gtgcgggatc
     1261 tcgataccgt gcgggcggcc gacgtccggg cccgcgtgcg cgcgcgtgag gtgttggcgt
     1321 gactctgctg aacaatctgt ggcctctcat catcaccctc ggggtgctga tcttcgttca
     1381 tgagctggg
//
LOCUS       DATIFF010000231         2269 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_493684, whole genome shotgun sequence.
ACCESSION   DATIFF010000231 DATIFF010000000
VERSION     DATIFF010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2269
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_493684"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..722)
                     /locus_tag="VLD58_03340"
     CDS             complement(<1..722)
                     /locus_tag="VLD58_03340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53357.1"
                     /translation="MRALVLIAGLSAALAGPLAGQTVCTPPDNSNEAKIFANFAVPLA
                     FSPLAAPALARPGAVRVGFEGSYLPTLDAATRTPTICRPGKGPENTDLLFAVPRPRIA
                     VGLPGGFMLEASWIPPVRVNGVKANVGAVALGRGFGIGKGGMTAGLRVHTTFGLIQAP
                     ITCDQEELADPTSECYQGTLSNDQYHPTTFGAEGSFGWRLAGGRVRPYVGGGVNLLRP
                     RFQVGFTNQFGSTDSTRVQVNLT"
     gene            793..1470
                     /locus_tag="VLD58_03345"
     CDS             793..1470
                     /locus_tag="VLD58_03345"
                     /inference="COORDINATES: protein motif:HMM:NF024183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HSB53358.1"
                     /translation="MNDLDHFFRQLVANLSATDPARLYQPISIADIQNFVIPYRANRR
                     ALGLTSAEDYEVLLLRLCAGERGLARTDPPEIQATFKSEAAGTNPDLRLLRTHGDALV
                     SLSGHAVALALAVDPHAAYAPPAVPAVETFEPVLSHTRSPHEAPSEELLLDEVRTPED
                     GDPHPADAAGLMCLFCGGALPADRPVNFCPHCGQSQTTLRCPACQAEIELGWRHCAGC
                     GAPVGDR"
     gene            1564..>2269
                     /locus_tag="VLD58_03350"
     CDS             1564..>2269
                     /locus_tag="VLD58_03350"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF012336.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HSB53359.1"
                     /translation="MSPPEHEEHVVFLSAVRTGFGTFGGALKDHSATDLGALAAQCAI
                     ARAGVEPVDLGHVVFGNVIQTSTDAAYLARHVGLRAGLPIEVPAVTVNRLCGSGFEAI
                     IQGAHRILLREATAVLAGGTESMSQAPYVLRGARWGTRLGQPPALEDSLWESLRDTQC
                     GLPMGETAENLGRRYGVTRQDADAYALSSQRRAKAAWDAGVFRDEVIPVPVRNPRTKQ
                     TVEWAADEHMRPDTTPE"
BASE COUNT          343 a          836 c          756 g          334 t
ORIGIN      
        1 gtgaggttca cctggacccg cgtgctgtcg gtgctcccaa actggttggt gaaaccgacc
       61 tgaaaccggg gccgcagcag attcacgccg ccgccgacgt atggtcggac ccggccgccg
      121 gcaagcctcc agccgaagga cccttccgcg ccgaaggtgg tcggatggta ctggtcgttg
      181 gagagcgttc cctgatagca ctcgctcgtc ggatcggcga gctcctcctg atcgcacgtg
      241 atcggcgcct ggatcaggcc gaacgtcgtg tgcaccctga gccccgcggt catgcccccc
      301 ttcccgatcc cgaagccccg cccgagcgcc acggcgccca cattcgcctt gacgccgttt
      361 acgcggaccg gcggtatcca gctcgcctcg agcatgaagc ctccaggcag tccgaccgcg
      421 atccgaggcc gggggacggc gaagagaagg tccgtgttct caggcccttt ccccggccgg
      481 cagatcgtgg gcgtccgagt ggcggcatcg agcgtcggca ggtagctccc ctcgaacccg
      541 acccgtacgg cgccgggccg cgccagcgcg ggcgcggcca gcgggctgaa cgcgaggggc
      601 acggcgaagt tcgcgaagat cttcgcctcg ttcgagttgt ccggcggggt gcacaccgtc
      661 tgcccggcca gcggcccggc aagcgcggcg gagagccctg cgatcagcac cagcgcacgc
      721 atccatcctc ctcgcttgac accccgggac tcgatcccta acctgccctc acggaccgac
      781 gcccggggct gcgtgaacga tctcgaccac ttctttcgcc aactcgtcgc caatctctcg
      841 gccaccgacc cggcacgcct gtaccagccg atctcgatcg ccgacatcca gaatttcgtc
      901 attccctacc gggccaatcg gcgcgcgctc ggcctgacca gcgcggagga ctacgaggtg
      961 ctcctgctcc ggctctgcgc cggggagcgc gggctggccc gcacggaccc acctgagatt
     1021 caggcgacat tcaagagcga ggcggcaggc accaaccccg atctccggct gctccgcacc
     1081 cacggcgacg cgctggtctc gctgtcgggg cacgccgtcg cgctggcgct cgcggtggat
     1141 ccccacgcgg cgtacgcccc cccggcggtt ccggcggtgg agacgttcga gcccgtacta
     1201 agccacacca ggtcccccca cgaggccccc agcgaagagc tacttctcga cgaggtccgc
     1261 accccggaag acggtgaccc gcacccggcc gatgcggccg gcctcatgtg cctcttctgc
     1321 ggcggagcgc tccccgccga tcggccggtg aacttctgcc cccactgcgg ccagagccag
     1381 accacgcttc ggtgtccggc ctgccaggcg gagatcgagc tgggctggcg gcattgcgcg
     1441 gggtgtggcg ctccggtagg cgatcgctga gcgcttggtt gaagaccccc tcgttcgggg
     1501 ccatattccg agtcccatgt ggtccgcccg tcccgcccgc ttgaccccag cccggagcac
     1561 cccgtgagcc cgccggagca cgaagagcac gttgtctttc tgtccgccgt gcggacgggg
     1621 ttcggaacct tcggcggggc gctcaaggac cattccgcca ccgacctcgg ggcgctcgcc
     1681 gcgcagtgcg ccatcgcccg ggccggcgtc gaacccgttg atctggggca tgtcgtgttc
     1741 ggcaacgtga tccagacctc gaccgacgcg gcctatctcg cccgccacgt cggccttcgc
     1801 gcaggactgc cgatcgaagt gccagcggtc accgtcaacc gactctgcgg ctccggcttc
     1861 gaggcgatca ttcagggggc tcaccggatc ctccttcgcg aggcgacggc cgtgctggca
     1921 ggcgggaccg agtcgatgag ccaggcaccc tacgtgcttc ggggcgctcg ctggggaacg
     1981 aggctgggac agccgcccgc gctggaagac agcctgtggg aatcgctgcg cgacacgcag
     2041 tgcggcctcc ccatgggaga gacggcggag aacctcgggc ggcggtacgg ggtcacccgg
     2101 caggacgccg acgcgtacgc gctgtccagc cagcggcgcg ccaaggccgc gtgggatgcg
     2161 ggcgtgttcc gggacgaggt gatcccggtc ccggttcgaa acccccggac caagcagacc
     2221 gtcgagtggg ccgccgacga gcacatgcga cctgatacca caccggagg
//
LOCUS       DATIFF010000232         8929 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_801112, whole genome shotgun sequence.
ACCESSION   DATIFF010000232 DATIFF010000000
VERSION     DATIFF010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8929)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8929)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8929
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_801112"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1192)
                     /locus_tag="VLD58_03355"
     CDS             complement(<1..1192)
                     /locus_tag="VLD58_03355"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB53360.1"
                     /translation="MSREFDALQQALRGRYILERELGRGGMGIVFLARDVALDRPVAI
                     KLLPPALAALADLRRRFLHEARTAARLSHPNIVPIHAVEEQDGLVWFVMTYVPGETLA
                     ARVRREGPLAPREVSRMVQEVAWALAYAHQHGVIHRDVKPENVLVERGSGRYLVVDFG
                     IARLTDEAASSPAGELLGTPRMVSPEQAGGETLDGRSDLYSLGVTAFFALTGRYPFES
                     DNVGQLLAQHLTVPAPPVASLRQDVPAPLALAIDRCLAKSPEERYPDGEALAAAIAEV
                     QPAPVPRILQMLTREISALGVDVVSFGSLAAVALASLALTRDFMGFGRIYTIGLVLAL
                     TALSAIRGITLLRLTREARGEGWTADDLADAAELDAREATRPAPSLGRRLALYGVGML
                     GTLLF"
     gene            1211..1969
                     /locus_tag="VLD58_03360"
     CDS             1211..1969
                     /locus_tag="VLD58_03360"
                     /inference="COORDINATES: protein motif:HMM:NF014003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent chlorinase/fluorinase"
                     /protein_id="HSB53361.1"
                     /translation="MPIITLLTDYGTSDSYVAEVKGVLLTRAPGATLIDITHEISPGD
                     VAAAGYILARAWSTFPAGTVHLAVVDPGVGTARAALALRTRKHAFVGPDNGVFGGVIR
                     GAEVQAVQLSTPAGASATFHGRDVFAPAAASLAMGEDLDRLGPRFSAIPRRLSGAAPH
                     YEGKTVIGEVIHVDRYGNLVTNLTGEYVPAYAVLEAESLVIGPLRSTFGDVEKGALLA
                     YIGSGGTVEIAVRDGSASRRLGLGVGGRVKARLG"
     gene            complement(1961..3544)
                     /locus_tag="VLD58_03365"
     CDS             complement(1961..3544)
                     /locus_tag="VLD58_03365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53362.1"
                     /translation="MPFPDRGRAAILPGLAALLCVAPGGLKAEPSDGISSLKNRIGYV
                     TQLLQDEQGRVVLDHSTAVGADGASLHFQYTDGSALVLALDHGSVVVSGHAVGHYPSG
                     GALQQGWRQLVLDASRTDTPAALALVRSWHPSGLSRDEESYLSLMQEKVASLSAPPHG
                     LQPVQDVAPAEPGGLVIDLSDLSDPTRLAPLLRSAAGLNGPSLRITVPGGRVHAGEFS
                     VGTGERIQGPILVLRGNAEIFGRVEGNLAAVQGNVVVHPGSVVTGDVLTLAGEVRDLG
                     GDIQGRIHTMDTPRAPAKAVEEAAPLSPILRLARNASGVAGVFLTLLLVGLGLVLFAR
                     QPLEVVSDTVLHSFSRSFLVGLLGQILILPTFGMLVVGLILTVAGILLVPFAVIVFTL
                     LLVLAVLGGFLAIAHAMGESITRRQLARGKSIHSANSYRYVTVGLGAVGALWLAWVAF
                     GWVPFAGTLVFVTAILVTWMLATVGFGAALLSRAGLREHFAGRLIPTESLTDEYLWAT
                     PQFGVTAVKRPGRTPPPLP"
     gene            complement(3531..4340)
                     /locus_tag="VLD58_03370"
     CDS             complement(3531..4340)
                     /locus_tag="VLD58_03370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53363.1"
                     /translation="MNDEPVHLGPDELDLWLDGRLPAARTSHLETCPACQQAAEETRD
                     IVLQLSTLPRIAPEQSLVEQVMARVQVPAAGHLTPDDLDQWIDGLLPARREAHLRECP
                     ECQALADAERVLVLRLQQVPLFNPAPGFGERVMDRVNIPVTSFASAWRFWRTRVFAHP
                     ASVAAAASAAVVLGGSLAASAAWAAAHQDQISGVVPWLVNQGQLLLNQGLTFASTTLQ
                     QQSWYGPLKAALTPGRMAAVVTTAIAVYGAGVLAMRRLLALPSPQVSRALP"
     gene            complement(4373..4975)
                     /locus_tag="VLD58_03375"
     CDS             complement(4373..4975)
                     /locus_tag="VLD58_03375"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSB53364.1"
                     /translation="MAERIDLASQTDQEIVALAREGREAAYRELIRRYERPVFSLILR
                     MVRDRQLAEDLSQETFIKALNAIATYRPEFKFSSWIFKIANNAAIDHLRRREVDTLSL
                     DGAPNATSQEDIEATALQVGDKGETPLAELEARELGTAIERAIGQLRPEYRSCILLRH
                     VEGMAYEEIAQLLDLPLGTVKTYIHRARHELRGMLAGLRD"
     gene            5029..5754
                     /locus_tag="VLD58_03380"
     CDS             5029..5754
                     /locus_tag="VLD58_03380"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone/menaquinone biosynthesis
                     methyltransferase"
                     /protein_id="HSB53365.1"
                     /translation="MLATDRKLPLSGGREKRSYVRAMFTAIAPRYDFLNHALSLNVDR
                     LWRRQAVARLNWERVPSGTYLDLCAGTLDLAVALSRAPGFTGRVVGADFVLPMLSLGR
                     MKSDKVRPVNADALELPFPDATFDGATVGFGVRNLADLDLGIAEAYRVLKPGSRFVVL
                     ELTTPPRQPLRGLYFLYFRRVLPLIGRLVSHHGEAYSYLPQSVLDFPEPQALCDRLRG
                     QGFRDVEYTLLLGGLAAIHVGVK"
     gene            5758..7239
                     /locus_tag="VLD58_03385"
     CDS             5758..7239
                     /locus_tag="VLD58_03385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis decarboxylase"
                     /protein_id="HSB53366.1"
                     /translation="MAIDTLQEFVAGIEKLGELVRVKEPVRTRLEIAEIADRCMKSPG
                     GGPALLFERPILESGQPSEYPVGINLFGSMKRMCFSLGVEDLDEIGGRISEMLNLKVP
                     DGLFGKLAMLPKLAEIAKFPPRTKGGKGACQETVWKGDQVDLDRIPFLTTWPGDGGRY
                     ITLPMVITEDPKTGVRNVGMYRVQVLGKNTLAMHWQRHKSGAAHWRELAEQNKTMPVV
                     IAIGADPASMYSGSAPLPPTIDEFIFSGFLRRSPVELCKALTCDLEVPAESDFVIEGY
                     IDPAEPLVMEGPFGDHTGFYSLADLYPKVHVTAVSMRRDPIYPATLVGRPPMEDYYLG
                     HATERIFLPLLRLTLPEIVDYHMPAYGIFHNLVFVSIDKQYPGQAYKVMNALWGAGLM
                     SLAKVLVIVDKDVNVRNPDEAWWVALNNIDPERDTRFTKGPVDVLDHSSQYFSFGTKM
                     GIDATRKWKDEGFTREWPSVITMDEATRKRVDDLWPSLGIRLP"
     gene            7403..8305
                     /locus_tag="VLD58_03390"
     CDS             7403..8305
                     /locus_tag="VLD58_03390"
                     /inference="COORDINATES: protein motif:HMM:TIGR01475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA-like polyprenyltransferase"
                     /protein_id="HSB53367.1"
                     /translation="MTTVSREGQTFAGESLFVRYINFVKLPHTLFALPFALLGVLEAS
                     FRGQVTWQMVGLVVVAFSAARWTAMGFNRIADREFDARNPRTLNRELPRGSLTLGQAW
                     ASVIAAGVIFVVASWQLNPLCFALSPVALGWIMLYSLSKRFTWWPHLWLGLSLAIAPV
                     GGYLAITGQWSEPWWVLIAISVAVATWVAGFDIFYALPDAAFDKGEGLKSAVVRLGER
                     NSILLAKLLHGVTIPALALFGYGAGFGLWYFIGIGVAAAILAYEHQLVKPGDLSRLDA
                     AFFTMNGVMSVTVFGFALVDRLVG"
     gene            8380..8538
                     /locus_tag="VLD58_03395"
     CDS             8380..8538
                     /locus_tag="VLD58_03395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53368.1"
                     /translation="MSKRPPKENLIPRRGNPPGKPHPEKGAAAPKVPPPRPNPHPVRT
                     PSGNQRGR"
     gene            8540..>8929
                     /locus_tag="VLD58_03400"
     CDS             8540..>8929
                     /locus_tag="VLD58_03400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavoprotein"
                     /protein_id="HSB53369.1"
                     /translation="MHPVVFAITGASGAPYAIRLLEVLARNKVPTWLIISGHGWRLIT
                     SETGIADDAGLKAATGGDWSSITFFPDSDRGALPASGSAKSSGMVICPCSMGTVAAIA
                     GGTSRSLVERAADVALKERRRLVLVPRE"
BASE COUNT         1432 a         2932 c         3143 g         1422 t
ORIGIN      
        1 agaagagcaa cgttcccagc atgcccacgc cgtacaacgc gaggcgcctt cccagcgacg
       61 gcgcggggcg ggtggcctcg cgggcatcga gctcggcggc atcggcaagg tcgtcggccg
      121 tccacccttc gccgcgcgcc tcgcgggtca gccggaggag cgtaatcccc cggatggcgc
      181 tcaaggccgt gagcgcgagg accaggccga tcgtgtagat ccggccgaag cccatgaaat
      241 cgcgcgtcaa cgccagcgag gcaagggcca ccgccgcgag cgagccgaag ctcaccacgt
      301 cgacgcccag ggccgagatc tcgcgggtga gcatctgcag gatgcggggc accggggcgg
      361 gctgcacctc cgcgatcgcg gcggcgaggg cctcgccgtc gggataccgc tcctccggcg
      421 acttggcgag acagcggtcg atggcgagcg ccagcggcgc tggcacgtcc tgccggaggc
      481 tcgccaccgg aggcgccggc acggtcaggt gctgggccag cagctgaccc acattgtcgc
      541 tctcgaaggg atagcggccg gtcagcgcga agaatgcggt gacgccgagc gagtagagat
      601 cgctccggcc atccaacgtc tcaccgccgg cctgctccgg gctcaccatc ctgggcgtgc
      661 ccagcagctc gcccgccggc gagctggccg cttcgtccgt caggcgcgcg atcccgaaat
      721 ccaccaccag atagcggccg gagccgcgct cgaccagcac attctccggc ttcacgtcgc
      781 ggtgaatcac gccgtgctgg tgggcgtagg cgagggccca cgccacctcc tgcaccatcc
      841 ggctcacttc cctgggcgcc agggggcctt cgcgccgcac tctcgcggcg agggtctcgc
      901 ccggcacgta ggtcatgacg aaccagacca gcccgtcctg ctcttcgacg gcatggatcg
      961 gcacgatgtt gggatgggag agccgggccg cggtgcgggc ctcgtggagg aaacgccgcc
     1021 gcaggtcggc cagcgccgcc agcgcgggcg gaaggagctt gatggcgacg gggcgatcca
     1081 gcgccacatc ccgggcgagg aacacgatgc ccatgccgcc ccggccgagt tcacgttcga
     1141 ggatgtagcg gccgcgcagg gcctgctgga gcgcgtcgaa ttcccggctc accggtgata
     1201 ccttgtcccc atgcccataa tcacgctcct cacggattac ggaacttccg actcttacgt
     1261 cgccgaggtc aagggagtgt tgctcacccg ggcgccgggg gccacgctga tcgacatcac
     1321 ccacgagatc tccccgggcg atgtggccgc cgccgggtac atcctggccc gggcctggag
     1381 caccttcccg gcggggacgg tccacctcgc ggtggtcgat ccgggcgtcg ggacagcccg
     1441 tgcggcgctc gcgttgcgga cccggaaaca cgcgttcgtg ggccccgaca acggggtctt
     1501 cggtggcgtg atccgcggcg ccgaagtcca ggcggttcag ctttccacgc ccgcgggggc
     1561 ctcggccacc tttcacggcc gtgacgtctt cgcgccggcc gcggcaagcc tcgcgatggg
     1621 agaggacctc gaccggctgg ggccgcgctt ctccgccatt ccccgccgcc tgagcggcgc
     1681 cgcaccacac tacgagggca agacggtgat tggcgaggtc atccacgtcg accgctacgg
     1741 caacctggtt accaacctta ccggtgaata cgtcccggcg tatgccgtgc tggaggcgga
     1801 gtcgctcgtc atcgggccgc tccgctcaac cttcggtgat gtcgaaaagg gggcgctgct
     1861 ggcctacatc ggctcgggcg gtaccgtcga gatcgcggtg cgggatggct ccgcctcgcg
     1921 ccggctcggc ctgggggtgg gcgggagggt gaaagcccgg ttagggtagc ggcggcgggg
     1981 tgcggccggg ccgcttcacc gccgtgacgc cgaactgcgg ggtggcccag aggtactcgt
     2041 cggtcagcga ctcggtgggg atgagccggc cggcgaaatg ctccctgagg cccgcccggg
     2101 agaggagggc cgcgccgaag cctaccgtcg ccagcatcca ggtcaccagg atcgcggtga
     2161 cgaacaccag cgtcccggcg aacggcaccc agccgaatgc cacccaggcg agccagagcg
     2221 cgcccacggc gccgagtccc accgtcacat agcggtagct gttggccgag tggatcgact
     2281 tgccgcgcgc gagctgccgg cgggtgatcg attcgcccat ggcgtgcgcg atcgcgagga
     2341 agccgcccag caccgccagc accaggagca gggtgaagac gatcacggcg aaggggacca
     2401 gcaggatccc ggcgaccgtg aggatcagcc ccaccaccag catcccgaac gtcggcagga
     2461 tcaggatctg tcccagcagg cccaccagga acgagcggct gaacgagtgg agcacggtgt
     2521 cgctcacgac ttcgagcggc tgccgggcga agagcaccag cccgagtccc acgaggagca
     2581 gcgtgaggaa cacgccggcc acgcccgagg cgttgcgggc cagccggagg atcggagaga
     2641 gcggggcggc ctcttcgacc gccttcgcgg gggcgcgggg cgtgtccatc gtgtggatcc
     2701 ggccctggat gtcgccgccc aggtcacgca cctcgccggc gagggtaagg acgtcgccgg
     2761 tcactaccga tccgggatgc accaccacgt tgccctggac cgccgcgaga ttcccttcca
     2821 cccggccgaa gatctcggcg ttgccacgca gcaccagaat tggtccctgg atccgttcac
     2881 cggtgccgac actgaattcg ccggcgtgca cccgcccgcc gggaacggtg atgcgcaacg
     2941 acgggccgtt gagaccagcg gcggagcgaa gcagcggagc caggcgagtg ggatcgctca
     3001 ggtccgagag gtcgatcacc agcccgcccg gctcggccgg agcaacgtcc tgcaccggtt
     3061 gaagaccgtg aggcggcgcc gagagcgagg cgaccttctc ctgcatcagg gagaggtacg
     3121 actcttcgtc ccgcgagagg ccgctcgggt gccagctccg caccagcgcg agcgcagccg
     3181 gggtatcggt gcgcgacgcg tcgagcacca gctggcgcca cccctgctgg agcgcaccgc
     3241 cgctcgggta gtggccgacc gcatgcccgc tcacgaccac ggagccgtgg tcgagtgcga
     3301 ggaccagggc gctgccatcg gtgtactgga aatggaggct ggcaccatcg gccccgaccg
     3361 cggtgctgtg atcgagcacc acccggccct gctcatcctg gagcagctgg gtgacgtagc
     3421 cgatgcgatt cttgagactg gagataccgt cggagggttc ggccttgagg ccgcccggcg
     3481 ctacgcagag caacgccgcg agccccggca ggatcgcggc gcggccgcga tcagggaagg
     3541 gcacgggaaa cctggggcga cggaagcgcg agcaggcggc gcatggccag tacaccggca
     3601 ccgtagaccg cgatcgcggt ggtcaccacc gcggccatgc ggcccggggt gagcgccgcc
     3661 ttgaggggcc cgtaccagct ctgctgctgc agggtggtgc tggcgaacgt gaggccctga
     3721 ttcaggagga gctggccctg attgaccagc cagggaacga cgccgctgat ctggtcctgg
     3781 tgagccgcgg cccatgccgc gctcgccgcg agcgaaccac cgagcacgac cgcggcactc
     3841 gccgcggcgg cgacactggc cgggtgggcg aagacccggg tgcgccagaa gcgccaggcg
     3901 ctggcgaacg aggtgaccgg aatgttcacc cggtccatca cccgctcgcc gaagcccggc
     3961 gccggattga agagcgggac ctgctgcagc cggagcacga ggacccgctc ggcgtcggca
     4021 agggcctggc actccgggca ctcccgcaga tgcgcttccc gccgggccgg aagcaggcca
     4081 tcgatccact gatcgagatc gtccggggtc aggtgccccg cagccgggac ctgtacccgg
     4141 gccatgacct gctcgaccag actctgttcc ggcgcaatgc ggggcagggt ggagagctgg
     4201 aggacgatgt cgcgggtttc ttcagcggcc tgttggcagg cggggcacgt ttcgaggtga
     4261 gacgtacgag ctgcggggag acgtccgtcg agccagaggt ccagttcatc agggccgagg
     4321 tggacgggtt cgtcgttcat agcggctcct acggtctcct ccaagggcgg tttcagtccc
     4381 tgagtcccgc cagcataccg cgcaattcgt gacgcgcgcg atggatgtag gtcttcacag
     4441 ttccgagcgg caagtcgagg agctgagcga tttcctcgta ggccatacct tcgacatgcc
     4501 ggagcagaat gcagctgcga tactccgggc ggagctgtcc gatcgcgcgc tcgatggcgg
     4561 tgccgagttc gcgggcctcg agctcggcga gaggggtttc acccttgtcg cccacctgga
     4621 gcgcggtggc ttcgatgtct tcctggctgg tggcgttggg ggcaccgtcg agggacaagg
     4681 tgtccacctc gcgccgccga aggtgatcga tggccgcgtt gttcgcaatc ttgaagatcc
     4741 agctcgagaa cttgaactcg ggccggtagg ttgcgatcgc gttcagcgcc ttgatgaatg
     4801 tttcctgcga gaggtcttcc gcgagctgcc ggtcgcggac catacgcaga atgagcgaaa
     4861 ataccggccg ttcgtaacgc cggatgagtt cccgataggc ggcctcccgg ccttcccggg
     4921 cgagggcgac gatctcctga tccgtctggg aggcgagatc gatccgctca gccatggacg
     4981 cttccgcggc ttgcactgcc gcttcgaagg gagatatctt gcgcgcctat gttagccacg
     5041 gataggaagt taccgctctc cggcggccgg gagaagcggt cctacgtccg ggcgatgttt
     5101 accgccatcg ccccgcgcta cgacttcctg aatcatgccc tgagtctcaa cgtcgaccgg
     5161 ctatggcgcc ggcaggctgt ggcacgcctc aactgggaac gcgtgccatc ggggacgtat
     5221 ctcgacctct gtgcgggtac actcgatctg gcggtggcgc tcagccgggc cccggggttc
     5281 accggcaggg tggtcggtgc ggacttcgtc ctgccgatgc tgagcctggg acgtatgaaa
     5341 tctgacaagg tccgcccggt caacgccgac gccctggaac tgccgtttcc ggacgccacg
     5401 ttcgacgggg cgacggtcgg gttcggggta cgcaacctcg ccgatctcga tctcgggatc
     5461 gccgaggcgt accgggtgct caagcctggg tcccggtttg tcgtgctgga actcaccacg
     5521 ccgccccggc agccgctccg ggggctctac ttcctctact tccgccgggt gctgccgctg
     5581 atcgggcggc tggtttcgca ccacggcgag gcctatagct acctcccgca atcggtgctc
     5641 gacttccccg agccccaggc gctctgcgat cgcctgcggg gccagggttt ccgggatgtg
     5701 gagtataccc tgctcctcgg cgggctcgcg gcgattcacg ttggagtgaa gtagcccatg
     5761 gcgatcgaca cgctgcagga gttcgtagct ggtatcgaga agctgggcga actggtccgg
     5821 gtgaaggagc cggtgcgcac ccggctcgag attgccgaga tcgccgaccg ctgcatgaag
     5881 agtcccggcg ggggaccggc gctcctcttc gagcgcccca tcctcgagag cgggcagccg
     5941 agcgagtacc ccgtcggcat caatctgttc ggctcgatga agcggatgtg cttctcgctc
     6001 ggggtggagg acctggacga gatcggcggg cggatttccg agatgctcaa cctcaaggtg
     6061 ccggacgggc tcttcgggaa gctggcgatg ctccccaagc tggcggagat cgcgaagttt
     6121 ccgccccgga ccaagggcgg caagggcgcc tgccaggaaa cggtgtggaa gggcgaccag
     6181 gtggacctgg accggattcc gtttctcacc acctggccgg gtgatggcgg gcgctacatc
     6241 accctgccga tggtgatcac ggaggatccg aagaccgggg tccggaacgt cgggatgtac
     6301 cgggtgcagg tgctggggaa gaacacgctg gcgatgcact ggcagcggca caagagcggc
     6361 gccgcgcact ggcgcgagct ggcggagcag aacaagacca tgccggtggt gatcgcgatc
     6421 ggggccgatc ccgccagcat gtactccggc tcggcgccac tgccgccgac catcgacgag
     6481 ttcatcttct ccggctttct ccgtcgttcg ccggtcgagc tctgcaaggc cctcacctgc
     6541 gacctggaag tgccggccga gtccgatttc gtgatcgagg ggtatatcga tccggcggag
     6601 ccgctggtga tggaagggcc gttcggggat cacaccgggt tctactcgct ggcggacctc
     6661 tatcccaagg tgcatgtcac cgcggtcagc atgcggcggg acccgatcta tcccgccacg
     6721 ctggtgggcc ggcctccgat ggaggattac tacctcggcc atgcgaccga gcggatcttt
     6781 cttccgctcc tgcggctcac gctgccggag atcgtggact atcacatgcc ggcgtacggg
     6841 atcttccaca acctggtgtt cgtctcgatc gacaagcagt acccggggca ggcctacaag
     6901 gtgatgaacg cgctctgggg cgcgggcctc atgtcgctcg cgaaggtcct ggtgatcgtg
     6961 gacaaggacg tgaacgtccg caaccccgac gaggcgtggt gggtggcgct caacaacatc
     7021 gaccctgagc gggacacccg cttcaccaag gggccggtcg atgtgctgga ccattcgagc
     7081 cagtatttca gcttcgggac caagatggga atcgacgcca cccggaagtg gaaggacgag
     7141 gggttcaccc gggagtggcc gtcggtgatc acgatggacg aggcgacccg gaagcgggtg
     7201 gacgacctct ggcccagcct cgggatccgg cttccatgac acggtccggc gaaaggaact
     7261 gcaccacgga gacacagtgg gcacagagaa ccacaagagt actctcactc ctgcgtgagg
     7321 tttggtcagg tctcttcatg tcgtgttctc ctgcatttct ctgtgctctc tgtgcctctg
     7381 tggtgaattc tggaggcccg gcatgacgac ggtgtcgcgg gaaggccaga cgttcgcggg
     7441 cgagtcactg ttcgtccgct atatcaactt cgtcaagctg ccgcacacgc tgttcgcgct
     7501 gccgtttgcg ctcctcggag tcctggaggc atcgttccgc gggcaggtga cctggcagat
     7561 ggttggactg gtggtggtgg cgttcagcgc cgcccggtgg accgcgatgg gcttcaaccg
     7621 gatcgccgac cgggaattcg acgcccgcaa tccccggacg ctcaaccgcg agctgccgcg
     7681 cggatcgctg accctgggac aggcctgggc ctccgtgatc gcggcaggcg tcatcttcgt
     7741 ggtcgcgagc tggcagctca atccgctctg ctttgccctc tcgccggtgg cgctcggctg
     7801 gatcatgctc tacagcctga gcaagcggtt cacctggtgg ccccatctct ggctcggcct
     7861 ctcgctggcc atcgcgccgg tgggagggta tctcgcgatc accggccagt ggagcgagcc
     7921 ctggtgggtg ctgatcgcga tctcggtcgc ggtggcgacc tgggtagcgg ggttcgacat
     7981 cttctacgcc ctgcccgacg ccgccttcga caagggggag gggctcaaga gcgcggtggt
     8041 acggctgggg gagcggaaca gcatcctgct cgccaaacta cttcacggtg tcacgattcc
     8101 ggcgctggcc ttgttcggct acggcgcggg attcgggctc tggtacttca tcggcattgg
     8161 ggtggccgcc gccatcctcg cctacgagca tcagttggtg aagccgggtg acctgtcacg
     8221 gctcgacgca gccttcttca ccatgaacgg ggtgatgagc gtgacggtgt tcgggtttgc
     8281 gctggtggat cggttggtgg ggtagggttt gaggtcgagg gtttgagggt cacgggtcta
     8341 gggtcaaggg tcgagggcca ggctgaatag gagccaacca tgagcaagcg tccgccgaag
     8401 gagaatctga ttccgcgccg gggtaaccca cccggaaagc cgcacccgga gaagggcgcc
     8461 gcggcgccca aggtgccgcc gccgcgtccc aacccccatc cggtgcgcac gccgagcggc
     8521 aatcagcgcg gccgctgaga tgcatccggt cgtcttcgcg atcaccggtg ccagcggagc
     8581 gccgtacgcg atccgtctgc tcgaggtcct ggcgcggaac aaggtgccga cctggctcat
     8641 catctcgggc cacggctggc gcctgatcac ctccgaaacc gggatcgcgg acgacgccgg
     8701 gctcaaggcg gcgaccgggg gcgactggtc cagcatcacc ttcttccccg acagcgatcg
     8761 cggcgcgctt cccgcctcgg gctcggccaa gtcctcgggc atggtgatct gtccctgctc
     8821 catgggcacc gtggcggcta tcgccggcgg caccagccgc tcgctggtag aacgggccgc
     8881 cgatgtggcg ctcaaggagc gccgcaggct ggtgctggtg ccgcgggag
//
LOCUS       DATIFF010000233         4525 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1878852, whole genome shotgun sequence.
ACCESSION   DATIFF010000233 DATIFF010000000
VERSION     DATIFF010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4525
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1878852"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2625)
                     /locus_tag="VLD58_03405"
     CDS             complement(<1..2625)
                     /locus_tag="VLD58_03405"
                     /inference="COORDINATES: protein motif:HMM:TIGR00915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSB53370.1"
                     /translation="MRFPRFFIDRPIFAAVLSIMVFLAGAIAMFALPVSEYPEVVPPS
                     IVVRAVYPGANPRVLSEAVATPLEEQINGVENMLYMSSQATADGVLTLTVTFRIGTDV
                     DLAQVQVQNRVSQALPRLPDEVRQLGVTTVKSSPDLTMVIHLVSPDNRYSMVYLRNYA
                     VLQVQDVLARIPGVGQVRIFGAGDYAMRIWLDPQKVAARGLSAGDVVNAIREQNVQVA
                     AGVIGAPPMPAAVDYQLSVNAHGRLLNEQEFGDVIIKTGADGELTRLRDVARIELAAG
                     DYALRSQLNNKDAVAIPIFQAPGSNALQLSATVRKTMEELKQNFPKGVEYRIVYDPTI
                     NVRDSIREVVKTLFIAILLVAITVVLFLQTWRASIIPLVAVPISIVGTFAVMLGFGFS
                     INTLSLFGLVLAIGIVVDDAIVVVENVERNIEAGLSPRDASYKAMEEVSGPIIAIALV
                     LCAVFVPVAFLSGLTGQFYRQFALTIAISTVISAFNSLTLSPALSAILLRPHGAPPDR
                     VSRVLDRGLGWIFRPFNRAFVRGSANYGAVVARVIRTSGLALAVYAGLLVLTAVGFVK
                     VPTGFVPTQDKQYLVAFAQLPDGATLDRTDAVLQRMADIGLTQPGVANAVQFPGLSIN
                     GFVNSPNAGIVFFPLKPFEERRSKAEYGLNIAGALNQKFGSIQDAFVAVFPPPPVQGL
                     GTVGGFKLELEDRAGLGEAELARTTDALLAKAYQTPQLAGLFSGFRINVPQLYVDVDR
                     DKAKEQGISLTDLFQTLQIYLGSVYVNDFNKFGRTYQVIVQADAPYRATADAIAQLKV
                     RNAGGQMVPLGSVIRVKQSYGPDRGLRYNAYPAADINGGPAPGVSSGQAQATMERLLK
                     ETLPNGIGYEWTDLTYQQI"
     gene            complement(2651..3817)
                     /locus_tag="VLD58_03410"
     CDS             complement(2651..3817)
                     /locus_tag="VLD58_03410"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSB53371.1"
                     /translation="MQTRWLLPAGLLAPALVLAGCGGKPADPPAAPAVTVAAVPERQV
                     TDWDEFTGRLEAVDQVEIRPRVSGYIERVAFAEGKGVQKGEVLFEIDPRPYQAELAKV
                     EAELAEARTAAELAAREVQRAGRLVAVQAISREEYDSRVSAQAKGNASVQAAEAAVRT
                     ARLNLDWTRVRSPIAGRVSRAEVTAGNLVLAGPPTATLLTTVVSLDPVYVYFDADEQT
                     YLKYAGLQRDGTRPSSRDVRTPIYLGLINEDGLFPHKGYVDFVDNAVNPETGTIRARA
                     VFSNQDHFFTPGLFARLKLEGSGQYQATLVVDRAVGTDQDKRFVLVLKPDSTVDYQSV
                     RLGRLVDGLRIVSSGLNQGDEVVINGLQRVRPGMKVTPTLARMAPDTTTDTALR"
     gene            complement(3963..4289)
                     /locus_tag="VLD58_03415"
     CDS             complement(3963..4289)
                     /locus_tag="VLD58_03415"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSB53372.1"
                     /translation="MKRRSSPRSRVSPDQFALIGKALADPRRMAVLEAIAGEEECACA
                     RLRAQFPVSKATISHHVKELVRAGLIDAHREGQFLHCEVRRDVLAAYAAELLRRTGRE
                     RRAAGA"
     gene            complement(4286..>4525)
                     /locus_tag="VLD58_03420"
     CDS             complement(4286..>4525)
                     /locus_tag="VLD58_03420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53373.1"
                     /translation="LGFVGLHFLYAMSSGMIHGVGRDAEYLADAIAGGPMASRVGTPR
                     PPAPDLSISRAPVRREGGDRAGVLTGGGSSTIVKL"
BASE COUNT          717 a         1573 c         1535 g          700 t
ORIGIN      
        1 gatctgctga taggtgagat cggtccactc gtagccgatc ccgttgggca gcgtctcctt
       61 gagcagccgc tccatggtcg cctgggcctg ccccgagctc acgccgggcg cgggcccgcc
      121 gttgatgtcg gccgccgggt acgcgttgta gcgaagcccg cggtccggac cgtaggactg
      181 cttcacccgg atgaccgacc cgagcggcac catctggccg ccggcgttgc gcaccttgag
      241 ctgggcgatc gcgtcggcgg tggcgcggta gggagcgtcg gcctggacta ttacttggta
      301 ggtgcgcccg aacttgttga agtcgttcac gtacaccgac ccgagataga tctggagggt
      361 ctggaagagg tcggtcagcg agatgccctg ctccttggcc ttgtcccggt ccacgtccac
      421 gtagagctgg ggcacgttga tccggaagcc ggagaacagg cccgcgagct gcggggtctg
      481 gtacgccttg gccagcagcg cgtcggtcgt ccgcgccagt tccgcctcgc ccagcccggc
      541 ccggtcctcc agctcgagct tgaagccgcc caccgtgccg agcccctgga ccggcggcgg
      601 cgggaacacg gcgacgaacg cgtcctggat ggagccgaac ttctggttca gcgcgccggc
      661 gatgttgagc ccgtattcgg ccttcgaccg gcgctcctcg aacggcttga gcgggaagaa
      721 gacgatcccc gcgttgggcg agttgacgaa gccgttgatc gagaggcccg ggaactgcac
      781 cgcgttggcc acgcctggct gcgtcaatcc gatgtccgcc atgcgctgaa gcacggcgtc
      841 ggtgcggtcc agcgtggcac cgtcggggag ctgcgcgaac gccaccaggt actgcttgtc
      901 ctgggtgggc acgaaccccg tcggcacctt gacgaagccg accgccgtga gcacgagcag
      961 cccggcgtac accgcaaggg ccagcccgct cgtccggatc acccgcgcca ccaccgcacc
     1021 gtagttggcg gagccccgga cgaaggcccg gttgaagggc cggaaaatcc agcccagccc
     1081 gcggtccagg acccgcgaca cccggtccgg cggggccccg tgcgggcgca gcaggatcgc
     1141 gctcagcgcc ggcgagaggg tgagcgagtt gaacgccgag atcaccgtgg aaatggcgat
     1201 cgtgagggcg aactggcggt agaactggcc ggtcagaccg ctgaggaagg ccaccggcac
     1261 gaacaccgcg cacagcacca gcgcgatcgc gatgatcggc ccgctcacct cctccatggc
     1321 cttgtacgac gcgtcccggg gcgagagccc ggcctcgatg ttccgctcga cgttctccac
     1381 caccacgatg gcgtcgtcca ccacgatgcc gatcgcgagc accagcccga acagcgacag
     1441 cgtattgatc gagaacccga agccgagcat caccgcgaag gtgcccacga tggagatcgg
     1501 caccgccacc agcgggatga tcgacgcccg ccaggtctgg aggaacagga ccacggtgat
     1561 cgcgactagg aggatcgcga tgaagagcgt cttcaccacc tcccggatcg aatcccgcac
     1621 gttgatcgtc gggtcgtaga cgatccggta ctccacgccc ttggggaagt tctgcttcag
     1681 ctcctccatc gtcttccgca cggtggcgga gagctggagc gcgttggagc ccggcgcctg
     1741 gaagatcggg atggcgacgg cgtccttgtt gttgagctgg gagcggagcg cgtagtcgcc
     1801 ggcggcgagc tcgatccggg cgacgtcccg gagccgggtc agctccccgt ccgcgccggt
     1861 cttgatgatg acgtcgccga attcctgctc gttgagcagc cgcccgtgcg cgttcacgct
     1921 cagctggtag tccaccgcgg ccggcatcgg cggcgcgccg atcaccccgg cggccacctg
     1981 gacgttctgc tcccggatgg cgttcaccac gtcgcccgcc gagaggccgc gggcggcgac
     2041 cttctgcgga tcgagccaga tccgcatggc gtagtcgccc gcgccgaaga tccggacctg
     2101 ccctacgccc gggatccggg ccagcacgtc ctgcacctgc agcacggcgt agttccgcag
     2161 gtacaccatg ctgtagcggt tgtcgggcga gaccaggtgg atcaccatgg tcaggtccgg
     2221 agagctcttg accgtggtca cgcccagctg gcggacctcg tccggcagcc ggggcagcgc
     2281 ctggctcacg cggttctgca cctgcacctg cgccaggtcc acgtcggtgc cgatccggaa
     2341 ggtgaccgtc agggtcagca cgccgtccgc cgtcgcctgc gacgacatgt acagcatgtt
     2401 ctcgaccccg ttgatctgct cctcgagcgg ggtcgcgacc gcctcggaga gcacccgcgg
     2461 gttggcgccg ggatacaccg cccggaccac gatcgacggg ggtacgacct cggggtattc
     2521 gctcaccggc agcgcgaaca tcgcgatcgc gccggccagg aagaccatga tggacagcac
     2581 ggccgcgaaa atcggccggt cgatgaagaa gcgggggaaa cgcatggcgg ctccggtggc
     2641 tcggcgcggg tcagcgcagc gcggtgtcgg tcgtggtgtc gggagccatg cgcgccagcg
     2701 tcggcgtgac cttcatcccc ggccgcaccc gctggagccc gttgatgacg acttcgtcgc
     2761 cctggttgag acccgagctg acgatccgga gaccgtccac caggcggccg agccgcactg
     2821 actggtaatc cacggtgctg tcgggcttaa gcacgagcac gaatctcttg tcctggtcgg
     2881 tgccgacggc gcgatcgacc acgagcgtgg cctggtactg cccgcttccc tccagcttga
     2941 gccgggcgaa gaggccggga gtgaaaaagt ggtcctgatt ggagaagacc gcccgcgccc
     3001 ggatggtgcc ggtctcgggg ttgaccgcat tgtccacgaa gtccacgtag cccttgtggg
     3061 ggaacagccc gtcctcgttg atcaggccca ggtagatcgg cgtgcggacg tcgcgggagc
     3121 tgggtcttgt gccatcccgc tgcagaccgg cgtacttgag ataggtctgc tcgtcggcgt
     3181 cgaagtagac gtagacggga tcgagcgaca cgaccgtggt cagcagcgtg gccgtgggcg
     3241 gcccggcgag caccaggttg ccggccgtga cttccgcccg gctcacccgt cccgcgatgg
     3301 gtgagcggac gcgggtccag tccaggttga gccgcgcagt ccgaacggcc gcttccgcgg
     3361 cctggaccga ggcgttgccc ttggcttggg cactcacccg gctgtcgtac tcctcccggg
     3421 agatggcctg tacggccacc agccggcctg cgcgctggac ttcccgcgct gccagctccg
     3481 ccgcggtgcg ggcctctgcc agctcggctt ccaccttggc aagctcggct tgatacggcc
     3541 gggggtcgat ctcgaagagg acctcgccct tctggacccc cttaccctcg gcgaaggcga
     3601 ctcgctcgat gtagccgctc acccggggac ggatctccac ctggtccacc gcctcgagcc
     3661 ggccggtgaa ttcgtcccag tcggtgacct ggcgctcggg aacggccgcg acggtcacgg
     3721 cgggagcggc gggcgggtcg gcaggcttgc cgccgcagcc ggcgaggacc agggccgggg
     3781 ccagtagccc agctggaagc aaccaccgag tctgcatatc gtctcctcca ctcgcatcgg
     3841 ccggacccgc ggtccaagtc acagtcctat aggaacccgg atcacagttg tacaactgta
     3901 tgactcacgc cacgcactac gcccggatcg aggccgggtt tcaccacgtc cagggcggcg
     3961 gctcaggcgc ccgccgcccg ccgttccctg ccagtccggc gcagcagctc cgcggcgtag
     4021 gccgcgagca cgtcgcgccg cacttcgcaa tgcaggaact gcccctcgcg atgcgcgtcg
     4081 atcagtcccg cgcgcaccag ctccttgacg tgatgcgaga tcgtcgcctt cgacaccggg
     4141 aactgggccc gaagccgggc gcaggcgcat tcctcttcgc cggcgatggc ttccagtacc
     4201 gccatgcgcc gcgggtcggc cagcgccttg ccgatcagcg cgaactgatc ggggctgacc
     4261 cgcgaccggg gcgatgaacg tctcttcaca gtttaacgat cgtcgaactc ccgccaccag
     4321 tcaagacccc tgctcgatct ccaccctctc gtcgaacggg ggcccgcgaa atcgacaggt
     4381 ccggcgccgg cggccgcggc gtccccaccc ggctcgccat cgggccgccc gcgatggcgt
     4441 cggcgaggta ctctgcgtct ctgcccacgc catggatcat cccggacgac atcgcgtaga
     4501 gaaaatgcag cccgacgaag ccgag
//
LOCUS       DATIFF010000234         1138 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_187451, whole genome shotgun sequence.
ACCESSION   DATIFF010000234 DATIFF010000000
VERSION     DATIFF010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1138
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187451"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..686
                     /locus_tag="VLD58_03425"
     CDS             <1..686
                     /locus_tag="VLD58_03425"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HSB53374.1"
                     /translation="QATTAKGLLASTAVLVSMILLLPVLFRAFARFVVPHAPKTEFAF
                     LLMVAVLCAVITRQLGVYYLVGAFIVGMVAQRFREQLPAMASERMLDAVEAFASIFVP
                     FYFFHAGLVLRREDFTFTALGLGAVFLLVAVPPRILLVSLHRRLRFGERFADSLRVGV
                     PMLPTLVFTLVIAGILRDRFAVPPALFGGLIVYALANTMIPSLVFRTPTPEFETPEAL
                     PLTGQDPPA"
     gene            complement(683..>1138)
                     /locus_tag="VLD58_03430"
     CDS             complement(683..>1138)
                     /locus_tag="VLD58_03430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53375.1"
                     /translation="ADLRRRLPASGLGRTRLIIREPMAAADSSVAESQALRAGVLEQL
                     YRQNETSLAARDARIRILEDEVVRLRAVQLPLDQLSREATALYPDLTSLGVGRIVGVA
                     GGQPADTAIVIITGWRRPPDPHALVTLEHYFRARLNRDSVEVVIRPHRP"
BASE COUNT          136 a          419 c          370 g          213 t
ORIGIN      
        1 tgcaggccac gacggcgaag ggattgctcg cttcgaccgc ggtcctggtg agcatgatcc
       61 tgctcctgcc ggtgctcttc cgggccttcg cccgcttcgt ggtcccccat gccccgaaga
      121 ccgagttcgc cttcctgttg atggtggccg tcctctgtgc cgtcatcacc cgccagctcg
      181 gagtgtatta tctggtcggt gcgttcatcg tgggcatggt ggcccagcgg ttccgcgaac
      241 agctgccggc gatggcctcg gagcggatgc tcgatgcggt cgaggccttc gcctcgatct
      301 tcgttccctt ctacttcttc cacgccggcc tggtgcttcg ccgcgaggat ttcaccttca
      361 ccgccctcgg gctcggcgcc gtctttctcc tggtcgccgt cccgccgcgc attctgctgg
      421 tgagcctgca tcgcaggctc cgcttcggcg agcgattcgc cgacagcctc cgggtgggtg
      481 tcccgatgct gccgaccctg gtcttcaccc tcgtcatcgc cgggatcctc cgcgaccgct
      541 ttgcggtgcc gccggccctc tttggcggtc tgatcgtcta cgccctggcc aacacgatga
      601 ttccgtcgct cgtcttccgc acgcccaccc ccgagttcga gacgccggag gccctgccgc
      661 tcaccggcca ggacccaccc gcctagggac ggtgcggccg gatgacaacc tccaccgagt
      721 cccggttgag cctcgcccgg aagtagtgct ccagggtgac gagcgcatgc gggtccgggg
      781 ggcggcgcca accggtgatg atcacgatgg cggtgtccgc cggctggccg cccgccacgc
      841 caacgattcg cccgacgccc agactggtga gatcggggta gagggctgtc gcctccctgg
      901 agagctggtc cagcggcagc tgcaccgcgc gcagccggac cacttcgtct tccaggatcc
      961 ggatccgggc gtcgcgggcg gccagcgacg tctcgttctg gcgatacagc tgttccagga
     1021 ccccggcccg gagcgcctgg ctttccgcga ccgacgagtc ggccgccgcc atcggctccc
     1081 ggatgatcag ccgggtgcgg ccgagaccgg aggccggcag ccggcgacgc aggtccgc
//
LOCUS       DATIFF010000235         1574 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2186960, whole genome shotgun sequence.
ACCESSION   DATIFF010000235 DATIFF010000000
VERSION     DATIFF010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2186960"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1477)
                     /locus_tag="VLD58_03435"
     CDS             complement(<1..1477)
                     /locus_tag="VLD58_03435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53376.1"
                     /translation="MSRVPTIAVAVLAALSARMPAQDLDLAHLQVPAGFLDLSDVTFT
                     TRSDHTVTATAVTTLLNARTFVLVSSVPDSAGHRGLILGLKPDDWSLAKSIPQLAVPP
                     FDGLSLSNVGLVMTGQEVRTSSDLLPGEDYDFYRELYHSDDFELVLKPGINLIAAIPV
                     DRLPPGHPLLRIMDALGIEKGTVLLQGTLGKSLTLIGAPGAGAADAIKDLYLRAELPP
                     MRPPGAPEWFRSGQLALELTGAPSLRLAGEMTIRMDDEDLKFFVATTIARTGASISGG
                     LVADEDGWQQPFGIPWLVLKGVVLQLAITPTGSIQPGFAAKMIIGEKDIDVAMALAIS
                     PVGVPTSFMIKGVSDSGVALSDIVKLQRDMAAAHAAAAEAAGQTAPAGPVVDLDALPD
                     VAFKRLGLQFAPKPFPELGVERGMAIKGRLWLQLSPNGQLTDFAGVDVSVSDDGFWAR
                     GDLGAFQLGPLRWDDAKLDLTATRDSQYFMVKGAADLFGMRQ"
BASE COUNT          262 a          544 c          539 g          229 t
ORIGIN      
        1 cctgacgcat gccgaacaga tccgccgcgc ctttcaccat gaagtactgc gagtcgcggg
       61 tggccgtgag gtcgagcttc gcgtcgtccc accgcagtgg cccgagctgg aacgccccca
      121 ggtcgccgcg ggcccagaag ccgtcgtccg atacgctcac atccacgccg gcgaagtcgg
      181 tgagctggcc gttgggcgag agctgcagcc agaggcggcc cttgatcgcc atgccgcgct
      241 ccacgccgag ctcggggaac ggcttgggcg cgaactgcag ccctagacgc ttgaaggcga
      301 cgtccgggag ggcatcgaga tccaccaccg gccccgcggg cgccgtctgg cccgccgctt
      361 cagcggcagc cgcgtgcgcc gccgccatgt cccgctgcaa cttgacgatg tcggacagtg
      421 ccacgccgga atcgctcacg cccttgatca tgaaactggt gggcacgccc accggactga
      481 tggcgagggc catggccacg tcgatgtcct tctcgccgat gatcatcttg gccgcgaacc
      541 cgggctggat gctgcccgtc ggcgtgatgg ccagctgcag gaccacgccc ttgagcacca
      601 gccagggtat cccgaacggc tgctgccacc cgtcctcgtc cgccacaagg ccgccggaga
      661 tggaggcgcc ggtcctggcg atcgtggtgg cgacgaagaa cttcaggtcc tcatcgtcca
      721 tccggatcgt catttcaccc gcgagccgga gcgagggggc ccccgtcagc tcgagcgcca
      781 gctgcccgga gcggaaccac tccggcgccc cgggcgggcg catcggcggc agctcggccc
      841 ggaggtagag gtccttgatg gcatcggcgg cgcccgctcc cggcgcgccg atcagggtga
      901 ggctcttgcc cagcgtcccc tgcagcagga cggtcccctt ctcgataccg agcgcatcca
      961 tgatgcggag cagcggatgc cccggcggga gccggtccac gggaatcgcg gcgatgaggt
     1021 tgatccccgg cttgagcacc agctcgaaat cgtccgagtg gtacagctcg cggtagaagt
     1081 cgtagtcctc accgggcaga agatccgaac tggtccgcac ctcctggccg gtcatcacga
     1141 gtccgacgtt cgacagtgag aggccgtcga acggcggcac cgcgagctgc ggaatcgact
     1201 tggcgagcga ccagtcgtcc ggcttgagac cgaggatgag gccgcggtgg ccggcggaat
     1261 cgggtacgga ggacacgagc acgaacgttc gggcattgag cagtgtcgtc accgccgtcg
     1321 ctgtcacggt gtgatcgctg cgcgtcgtga acgtgacatc cgagaggtcg aggaaccccg
     1381 cggggacctg cagatgcgcc aggtcgaggt cctgcgccgg catgcgggcg ctcagcgcgg
     1441 ccagcaccgc gacggcaatc gtcggcaccc gactcattgc gtccccgtca gaatgcggtc
     1501 cacctgcagg aacagatccg tcagggcggc cggacccacg gagagccgcg cactccaatt
     1561 gaggcagcgg tccc
//
LOCUS       DATIFF010000236         1744 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2033774, whole genome shotgun sequence.
ACCESSION   DATIFF010000236 DATIFF010000000
VERSION     DATIFF010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1744
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2033774"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="VLD58_03440"
     CDS             <1..276
                     /locus_tag="VLD58_03440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53377.1"
                     /translation="VASDAKEYFGARMFPTVIPRNVRLAEAPSFGKPILLYDIQSVGA
                     KSYLAVAQELARRVESPDAVADAGKDGSEKVSRLNTTVPVPAEEDEG"
     gene            273..1142
                     /locus_tag="VLD58_03445"
     CDS             273..1142
                     /locus_tag="VLD58_03445"
                     /inference="COORDINATES: protein motif:HMM:TIGR00180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HSB53378.1"
                     /translation="MSETRRLGRGLEALLGPVSRQEAEAQGALQELPVSAIRPNPYQP
                     RARLDEPQFQELVASMEVAGLLQPVVVRRHMDGYQLIAGERRWRAAQKLGWQKIPAVI
                     KEADDRTLLTLALVENLQRDNLSSIEEATSYQRLLDEFQLSHADVARLVGRDRSTIAN
                     ALRLLKLPPEVMAMVDEGRLSEGHARALLGLTDRGHIVRLAQETVAQGWSVRTIEEKV
                     RGARPAGAKRAPVRQQAPAHRRVEDALRKRLGTDVRVTARRKGRGSIAITYYSEEDLV
                     RVLEMILGEPFNG"
     gene            1139..>1744
                     /locus_tag="VLD58_03450"
     CDS             1139..>1744
                     /locus_tag="VLD58_03450"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HSB53379.1"
                     /translation="MSQGGHVTIVVHSDGALASRTIRLPVWLLRTLIGVGATFAGLLL
                     LGLALYLPIVAQAARVPGLVREVDRLGAENRKIADLVAALDSAERRYDRIRAMLGADV
                     VPDPVRLASSLPVAPPVRAQVAGTPSPYETGLSAPTHWPLDEPGYVTRGQASSGGGAN
                     TPDEEHPGVDIAVPIGSPVRASGGGTVLQAGEDPEYGLFVVL"
BASE COUNT          284 a          594 c          605 g          261 t
ORIGIN      
        1 gtcgcgagcg acgcgaagga gtacttcggg gcccgcatgt ttccgacggt catcccgcgc
       61 aacgtccgcc tcgccgaggc gcccagtttc gggaagccga ttctgctcta tgacatccag
      121 tcggtcggcg ccaagagcta cctcgccgtc gcgcaggaac tggcgcggcg ggtcgaaagc
      181 cccgacgccg tcgccgatgc ggggaaagat ggaagcgaga aggtctcccg cctcaatacc
      241 acggtgccgg tcccggctga ggaggatgaa ggatgagcga gacccgacgc ctgggccgcg
      301 gactggaagc gctcctcggt ccggtgagcc ggcaggaagc cgaggcgcaa ggcgccttgc
      361 aggaactccc cgtcagcgcg attcgcccga acccatacca gccccgcgcc aggctcgacg
      421 agccccaatt ccaggaactg gtggcctcga tggaggtggc cggcctgctt cagccggtcg
      481 tggtgcgccg gcacatggac ggctaccagc tcatcgccgg cgagcgccgc tggcgcgcgg
      541 cccagaagct cggctggcag aagatccccg ccgtcatcaa ggaggccgat gatcggacgc
      601 tcctgaccct tgcgctggtc gagaatctcc agcgcgacaa cctctcgagc atcgaagaag
      661 cgaccagcta ccagcggctg ctggatgagt tccagctgtc gcatgccgac gtggcccggc
      721 tggtcgggcg cgaccgctcg accatcgcca acgcccttcg gctgctcaag ctgccgccgg
      781 aggtcatggc gatggtcgac gaaggccgtc tctcggaggg ccacgcacgc gcgctcctgg
      841 gactgaccga tcgtggccac atcgtccggc tggcgcagga gacggtagcc cagggatggt
      901 cggtccggac catcgaagag aaagtgcgcg gggcgcgtcc cgccggagcc aagcgggccc
      961 cggtgcggca gcaggccccc gcgcaccgcc gggttgaaga cgcccttcgc aagcggctcg
     1021 gcaccgatgt gcgggtgacc gcccggcgca aaggccgggg ctccatcgcc atcacctatt
     1081 actcggaaga ggatctggtc cgggtgctcg aaatgattct cggggagccg ttcaacggat
     1141 gagccagggc ggacacgtca ccattgtcgt gcactccgac ggcgcactgg catctcgcac
     1201 cattcgcctg ccggtgtggc tgctccggac gctgatcggc gtgggggcga cctttgccgg
     1261 tctgctgctg ctcgggctgg cgctctacct gcccatcgta gcccaggccg cgcgggttcc
     1321 cgggctggtg cgcgaagtgg accgcctcgg ggcggagaat cgcaagatcg ccgatctggt
     1381 agcggccctc gatagcgccg agcgtcgcta cgaccgcatc cgcgcgatgc tcggcgccga
     1441 cgtggttccc gatccggtcc gactggcctc gagtttgcca gtagctccgc cggtgcgggc
     1501 tcaggtggcc ggcacgcctt cgccatacga gacaggacta tccgccccca cccactggcc
     1561 gctggacgaa ccggggtatg tgacccgcgg ccaagcgagt tcggggggag gagccaatac
     1621 tcctgatgag gagcatcccg gggtcgacat cgccgttccc atcggcagcc ccgtgcgcgc
     1681 ctccggcggc gggaccgtgc ttcaggcggg agaagacccg gaatacggac tctttgtggt
     1741 gctg
//
LOCUS       DATIFF010000237         1148 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1725401, whole genome shotgun sequence.
ACCESSION   DATIFF010000237 DATIFF010000000
VERSION     DATIFF010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1725401"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(112..855)
                     /gene="ccoO"
                     /locus_tag="VLD58_03455"
     CDS             complement(112..855)
                     /gene="ccoO"
                     /locus_tag="VLD58_03455"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF011055.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HSB53380.1"
                     /translation="MAGTERDPFHRRVLEKSGAIFAVATTIAIMIGGLVEIIPMFTAK
                     FGPEHLAGVKPYTPLEVAGRDIYIREGCYLCHSQMVRPTRAEYLRYGEWTRAGEYAYD
                     HPFLLGSRRIGPDLQRVGGKYPDAWHFEHMANPRATSPGSIMPAYQWLHSQRIDPADV
                     EASVRALQRAGVPYTDADIAGTPAQLAAQGQEIVARLAAAGIKTEPDREIIALIAYLQ
                     RLGKDGRAAIAAGATAPKSEAAPKMQAAR"
     gene            complement(866..>1148)
                     /locus_tag="VLD58_03460"
     CDS             complement(866..>1148)
                     /locus_tag="VLD58_03460"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HSB53381.1"
                     /translation="ATTHFWLATIGIVLYTVSMWAAGLTEGLEWRALDTAGQLKYPNF
                     VDIVHQLNPFYWLRVVGGGMYLIGVIMMAWNFIRSASAKAVSAEAPAAA"
BASE COUNT          166 a          405 c          399 g          178 t
ORIGIN      
        1 cccggaaggc ccaccaggtc cagcccagga agcagaccat gaacagcacg gtcatcacgc
       61 ccatgatcca ggcgagctca acggtctgcg ctgcggcgcg gaacgcggga ttcatcgggc
      121 ggcctgcatt ttcggcgcgg cctccgactt gggggcggtg gcgccggccg cgatcgccgc
      181 gcggccgtcc ttgccgagcc gttggaggta agcgatcagc gcgatgatct cgcggtcggg
      241 ctcggtcttg atccccgccg cggccagccg ggccacgatc tcctggccct gggccgcgag
      301 ctgcgccggc gttcccgcga tatctgcgtc ggtgtacggc acgcccgcgc gctggagggc
      361 gcgcaccgag gcttcgacgt ccgccggatc gatccgctgg ctgtggagcc actggtaggc
      421 cggcatgatg ctgcccggcg acgtcgctcg cgggttggcc atgtgctcga agtgccaggc
      481 gtcggggtac ttcccgccca cccgctggag gtccggcccg atccggcggg agcccagcag
      541 gaaggggtgg tcgtacgcgt actctcccgc ccgggtccac tcgccgtagc gcaggtactc
      601 ggcccgggtg gggcgcacca tctgcgagtg gcagaggtag cacccctcgc ggatgtagat
      661 gtcccggccg gccacctcca gcggcgtgta cggcttcacg cccgcgagat gctccggccc
      721 gaacttggcc gtgaacatcg ggatgatctc caccaggccg ccgatcatga tcgcgatcgt
      781 cgtcgcgacc gcgaagatcg ccccgctttt ctccaggacc cggcggtgga aggggtcccg
      841 ctccgtgccc gccatcccgt cctcctcagg ccgccgcggg ggcctcggcg gagaccgcct
      901 tggcgctcgc ggagcggatg aagttccagg ccatcatgat gacgccgatc aggtacatcc
      961 ccccgcccac gacccggagc cagtagaacg ggttgagctg gtgcacgatg tccacgaagt
     1021 tcggatactt gagctggccg gccgtgtcga gggcccgcca ctcgaggcct tcggtcaatc
     1081 ccgccgccca catggacacg gtgtagagca cgatcccgat cgtggcgagc cagaagtggg
     1141 tggtcgcc
//
LOCUS       DATIFF010000238         2270 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_187866, whole genome shotgun sequence.
ACCESSION   DATIFF010000238 DATIFF010000000
VERSION     DATIFF010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2270
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187866"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(102..1460)
                     /locus_tag="VLD58_03465"
     CDS             complement(102..1460)
                     /locus_tag="VLD58_03465"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSB53382.1"
                     /translation="MRRAAAVLLASVLVVPALRAQDPGDSGGPPLQFRCDTTGTVVDR
                     IVAVVGEAPILSSQVEEEIFTQRSQNGAPPAKTPAEFVNLCRQVVSDLIDAEVLVQAA
                     QRDTAIKVEETEIAQGVDEQFRNIRQRFKTEPEFRAELNKSGFQTPEEFRRWLTENQR
                     KAALRNRLISKLRDEGKLKPVQPTEKEMRAYFELYKDQLPARPATISFRNIIVAPKAS
                     EEAKEKARLQADSIVRELRKGADFATAAKRFSQDPASAEQGGDLGWFRRGQMVKEFEA
                     VAFSQRPGAVSDPVESPFGFHIIQVQRIQPAEVQARHILIMPQVVQADADSAFRLAGT
                     IATLLKSGANFDSLSRIYHDPGEERDTPDDVPVTQLPEEYKAGIGAADSGQVVGPFEI
                     RKEMGLRRKYVVLEVKSRHTEGAVLYEDVKDQIRQRLAGDLAQKRFVDRIRRSTYVDI
                     RL"
     gene            complement(1460..>2270)
                     /locus_tag="VLD58_03470"
     CDS             complement(1460..>2270)
                     /locus_tag="VLD58_03470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53383.1"
                     /translation="PFGFHIIRRPPAAEVRDRMLAYAREQVGNQLDAIYLDSLGARRN
                     LKIDRNAPTAMRDAITERDRASHSTAVLATYDKGQLTVADFMKWVNALGPAWAADITR
                     RPDSSMTQFVRLLAQNQMLLQQADSAGIRATSDEWKSMQQRYSAQVDTLRMSLGLTAA
                     DFSDAAMPAADRIRAASVKIESHWDEVAKGGPRPRPIPPQLAAILRNSAKYRMDQAGL
                     DRAVELAKAKKAHDDSTNARGTAAPAPAPGITPGALPLTPPGQAPAAPRSN"
BASE COUNT          316 a          805 c          755 g          394 t
ORIGIN      
        1 ccccgatccg agcacgacag agccgcggtc ccttgcggcc acgaggctcg gaggtcgtgg
       61 tcccggctgg ctcctcagtt cctcggccta ccgtccccga actacaacct gatgtccacg
      121 taggtcgacc gccggatccg gtccacgaac cgcttctgcg ccaggtcgcc cgcgaggcgc
      181 tgccggatct ggtccttcac atcctcgtac agcaccgctc cttcggtgtg gcgcgacttc
      241 acctccagca ccacgtactt ccgccggagt cccatctcct tgcggatctc gaacggtccc
      301 acgacctgcc cgctatcggc ggcgccgata cccgccttgt actcctcggg cagctgcgtc
      361 accggcacat cgtcgggggt gtcccgctct tcgccgggat cgtgatagat ccgcgacagc
      421 gaatcgaaat tggccccgct cttgagcagc gtcgcaatcg tcccggccag ccggaacgcg
      481 ctgtccgcgt cggcttgaac cacctgcggc atgatcagga tgtgccgggc ctgcacttcc
      541 gccggctgga tccgctgcac ctggatgatg tggaacccga agggcgactc caccgggtcc
      601 gacaccgcgc cgggccgctg ggagaacgcg accgcctcga actccttcac catctggccc
      661 cgccggaacc agccgaggtc gccgccctgc tcggcactgg cggggtcctg ggagaaacgc
      721 ttggccgcgg tggcgaagtc ggcgcccttg cggagctcgc gcacgatcga gtcggcctgg
      781 agccgggcct tctccttcgc ctcctctgac gccttgggtg ccacgatgat gttgcggaac
      841 gagatcgtgg ccgggcgcgc gggaagctga tccttgtaga gctcgaagta cgcccgcatc
      901 tccttctcgg tcggctgcac cggcttgagc ttgccctcgt cgcgcagctt ggagatcagc
      961 cgattgcgaa gcgccgcctt ccgctgattc tcggtgagcc agcggcggaa ctcctccggg
     1021 gtctggaagc cggacttgtt gagctcggcc cggaactccg gctcggtctt gaagcgctgc
     1081 cggatgttgc ggaactgctc gtccacgccc tgggcgatct cggtctcttc caccttgatc
     1141 gcggtgtcgc gctgggccgc ctgcaccagc acctcggcgt cgatcaggtc ggacaccacc
     1201 tgccggcaga gattcacgaa ctccgcgggc gtcttggccg gcggtgcgcc gttctgggaa
     1261 cgctgggtga agatctcctc ttccacctgc gacgacagga tcggcgcctc acccaccacg
     1321 gccacgatcc ggtcgaccac cgttccggtg gtatcacagc ggaattgcag cggagggccg
     1381 ccgctgtccc ccggatcctg cgcccggagt gcgggcacaa cgaggacact cgccagcaga
     1441 actgcggctg cccgtcgcat cagttgctcc gaggcgccgc cggcgcctgg ccgggaggcg
     1501 tgagaggaag ggctcccggc gtgatgccgg gggccggggc aggagccgcg gtaccgcgcg
     1561 cgttggtcga atcatcgtgc gccttcttgg ccttggcgag ctccaccgcc cgatcgagcc
     1621 ccgcctgatc catccggtac ttggcgctgt tccggagaat cgcggcgagc tgcggcggaa
     1681 tcggccgggg gcgggggccg cccttggcga cctcatccca gtggctctcg atcttgacac
     1741 tggccgcgcg gatccggtcc gccgccggca tcgccgcatc ggagaaatcg gcggccgtga
     1801 gccccaggct catgcggagc gtgtcgacct gggccgagta gcgctgctgc atgctcttcc
     1861 actcgtcgct ggtggcccgg atgccggcgg agtcggcctg ctgcaacagc atctggttct
     1921 gggccaggag ccgcacgaac tgcgtcatgc tgctgtcggg acgccgggtg atgtccgcgg
     1981 cccaggccgg tcccagcgcg ttcacccact tcatgaaatc ggcgacggtg agctggccct
     2041 tgtcgtaggt cgcgagcacc gcggtcgaat gcgaggcgcg gtcgcgctcg gtgatcgcgt
     2101 cacgcatcgc cgtcggggcg ttgcggtcga tcttgagatt ccgccgggcg cccaggctgt
     2161 cgagatagat cgcgtcgagc tggttcccga cctgctcccg ggcatacgcc agcatccggt
     2221 cccgcacctc ggccgccggc gggcgccgga taatgtggaa cccgaacggg
//
LOCUS       DATIFF010000239         1489 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_956788, whole genome shotgun sequence.
ACCESSION   DATIFF010000239 DATIFF010000000
VERSION     DATIFF010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1489
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_956788"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1489)
                     /locus_tag="VLD58_03475"
     CDS             complement(<1..>1489)
                     /locus_tag="VLD58_03475"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098561 - methyl accepting chemotaxis
                     protein complex [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSB53384.1"
                     /translation="DPLATPRLLGAIAKVYAIVFFADRHQRIVAASEAAAAAVQKLGF
                     ASGALEGLDLALVHGQPAGFREAVSDPARLPFEHKIKSEQGIYKCVVSAVRDEQGELT
                     GYAVGWEDQTKRNRVEVELGRVLSMIESCPTNIICGDPDLTMQYLNPAGRKSLEALGP
                     VLPLQANEVSGKSMTVFFGQPAEAARILADPGRMPWTTRSHFGPQTVDFTVSATWDHQ
                     KRYIGPMLTWEVMTERLALEQSANDAREREKREAEELRRKVDLILETVHAAASGDLTR
                     PVTVSGSDAIGRLGTELARFLEDLRQSIGGIARHAVTLAAATEELSAVNRTVSEGATE
                     TSTQAQVVTASSAEVSQSVTTVAAGTEEMGASIREIAKNASEAAKVAADAVVTAEKTN
                     GVMDQLGNSSREIGKVVKLITTVAQQTNLLALNATIEAARAGEAGRGFAVVANEVKEL
                     AKETARATEEIGRKIDAIQGDTGRAVDGIRAIGEIIGKINEIQTTI"
BASE COUNT          177 a          520 c          512 g          280 t
ORIGIN      
        1 gatcgtggtc tggatctcgt tgatcttgcc gatgatctcg ccgatcgcgc ggatcccgtc
       61 caccgcccgt ccggtgtcgc cctggatcgc gtcgatcttc cgcccgatct cctcggtggc
      121 gcgggcggtc tccttggcga gttccttcac ttcgttcgcg accacggcaa agccgcgtcc
      181 cgcctcgccc gcgcgggccg cttcgatggt ggcgttgagc gccagcaggt tggtctgctg
      241 cgcgacggtg gtgatcagct tcacgacctt gccgatttcg cggctcgagt tccccagctg
      301 gtccatcacc ccgttggtct tctcggcggt gaccaccgcg tcggcggcga ccttggccgc
      361 ctcggacgcg ttcttggcga tctcgcggat gctggcgccc atctcttcgg tgccggccgc
      421 cacggtggtg acgctctggc tcacctcggc cgacgacgcg gtcacgacct gggcctgggt
      481 gctggtctcg gtcgcgccct cactcaccgt gcggttcacg gccgacagct cctcggtcgc
      541 ggccgccagg gtgacggcgt gccgggcgat tccgccgatg ctctggcgca ggtcctcgag
      601 gaaccgggcc agctcggtgc cgagcctccc gatggcgtcg ctgccgctca ccgtcaccgg
      661 cctggtcagg tcgccgctgg cggcggcatg caccgtctcg agaatgagat cgaccttgcg
      721 gcggagctcc tcggcctcgc gcttttcccg ctcgcgcgcg tcgttggcgg actgttccag
      781 cgccagccgc tcggtcatca cttcccaggt gagcatcggc ccgatgtagc gcttctggtg
      841 gtcccaggtg gcggagacgg tgaagtcgac ggtctggggg ccgaagtggg agcgggtggt
      901 ccacggcatg cgcccgggat cggccaggat ccgggccgct tcggccggct ggccgaagaa
      961 gaccgtcatc gacttgccgc tgacttcgtt cgcctggagc ggcagcactg gcccgagcgc
     1021 ttccagcgac ttccgcccgg ccgggttcag gtactgcatg gtgaggtcgg ggtcgccgca
     1081 gatgatgttg gtggggcagc tctcgatcat cgacagcacc cggcccagct ccacctcgac
     1141 ccggttgcgc ttggtctggt cttcccagcc caccgcgtag ccggtgagtt ccccctgctc
     1201 gtcccgcacc gcgctcacca cgcacttgta gatgccctgt tcgctcttga tcttgtgctc
     1261 gaagggcagc cgggcgggat cgctcaccgc ctcacggaag ccggcgggct ggccatggac
     1321 cagcgccagg tcgaggccct cgagggcacc agaggcgaac ccgagtttct ggactgcggc
     1381 cgcggccgct tcactggcgg ccacgatgcg ctgatggcgg tcggcgaaga agacgatggc
     1441 gtagaccttc gcgatcgctc ccagcagccg gggagtggcg agggggtcg
//
LOCUS       DATIFF010000240         2938 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1571994, whole genome shotgun sequence.
ACCESSION   DATIFF010000240 DATIFF010000000
VERSION     DATIFF010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2938)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2938)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2938
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1571994"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2219)
                     /gene="ppdK"
                     /locus_tag="VLD58_03480"
     CDS             complement(<1..2219)
                     /gene="ppdK"
                     /locus_tag="VLD58_03480"
                     /EC_number="2.7.9.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050242 - pyruvate, phosphate dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0015976 - carbon utilization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
                     /protein_id="HSB53385.1"
                     /translation="MSGSYSQPSVYFFGQGRADGTATMKDVLGGKGAGLAEMTNLGIP
                     VPPGFTIAASLCITYLETRQFPPWLRAQVETSLQRIEAATNRHFGGKERPLLVSVRSG
                     AAVSMPGMMETILNLGLNDTTVEGLTAESKNAQFAYDSYRRFVAMYSAVVFDLPKGPF
                     EHLLEERKKKAKVERDIDLPADQMKALVADFKAHVLKETGKPFPDDPMEQLWGAIAAV
                     FESWNTRRAIDYRKLHDIPDTMGTAVNIVTMVFGNLGEDSGTGVAFTRDPSTGEAKLY
                     GEYLLNAQGEDVVSGSRNVHPISELKEQMPAAYAELERISKVLERHFRDVQDMEFTIE
                     RGKLFMLQTRRGQRSGHAAVRVACEMVDEGAISEEEAVARIPPNDLNQLLHPTIDQDS
                     KVDLLTTGLPASPGAASGAAVFDADLAEQLSRKGEHVILVRRETSPEDFHGMVAAKGI
                     LTARGGMTSHAAVVARGLGKPCVASAQQLDVNEEQQAFSVNGRSIKQGEWITIDGGSG
                     KVYLGKAELKTAQLSGNFNRLMEWADKLRHIRVRVNADTPADAHRGRDFGAEGIGLCR
                     TEHMFFEGDRLLAMREMILAQDTEGRRKALAKLLPMQRGDFESIFRAMEGFPVTIRLL
                     DPPLHEFLPHDAEEVEALAKSLGKPAEEVQRIVNSLQETNPMLGLRGCRLGITYPEIT
                     AMQARAIFEAACAVAMRKGRVQPEVMIPLVANVVEFRKQALIVRQVAEEVFREKQITV
                     "
     gene            complement(2216..>2938)
                     /locus_tag="VLD58_03485"
     CDS             complement(2216..>2938)
                     /locus_tag="VLD58_03485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HSB53386.1"
                     /translation="DLDELKPRPQSRCIFELVYFARPDSRVFGESVDRVRRELGRQLA
                     VQHPAPGAQVVFSVPDSSNAMALGFAESSGIKLENGLIRNHYVGRTFINPTQALRVAK
                     VKIKFNPVRGVIDGKSVVMVDDSLVRGTTSKGLVQMIRAAGAREVHLRLGSPPITGPC
                     HYGIDTPTREELIGATHSIEEIRQYLGVDSLGYLSLDGMLKAAGSRSQWCHACFSGRY
                     PTDVSNDLVTLRHAAPPLATIP"
BASE COUNT          423 a         1019 c          983 g          513 t
ORIGIN      
        1 acggtgatct gcttctcgcg gaacacctcc tcggccacct ggcggacgat cagcgcctgc
       61 ttgcggaact cgaccacgtt ggccaccagc gggatcatga cctcgggctg gacccggccc
      121 ttgcgcatgg cgacggcgca ggcggcctcg aagatcgccc gcgcctgcat ggcggtgatc
      181 tcggggtagg tgatgcccag ccggcagccg cggagcccca gcatcgggtt cgtctcctgc
      241 aggctgttca cgatccgctg gacctcttcg gccggcttgc ccagcgactt ggccagcgct
      301 tcgacctcct ccgcgtcgtg cggcaggaac tcgtgcagtg gcgggtcgag cagccggatg
      361 gtgaccggga acccctccat cgcgcggaag atcgactcga agtcgccccg ctgcatcggg
      421 agcagcttgg cgagcgcctt ccgccggcct tcggtgtcct gcgccaggat catctcccgc
      481 atcgccagca gcctgtcgcc ctcgaagaac atatgctcgg tgcggcagag cccgatccct
      541 tcggcgccga agtctcggcc ccggtgggcg tcggccgggg tgtcggcgtt cacccgcacc
      601 cggatgtgcc gcagcttgtc ggcccactcc atcaggcggt tgaagttgcc cgagagctgc
      661 gccgtcttga gctcggcctt gccgaggtag accttgccgc tcccgccgtc gatggtgatc
      721 cactcgccct gcttgatcga ccggccgttc accgagaagg cctgctgctc ctcgttcacg
      781 tccagctgct gggcgctcgc gacgcagggt ttgcccaggc cgcgcgccac caccgccgcg
      841 tgactcgtca tccctcctcg ggcggtgagg atccccttgg ccgcgaccat gccgtggaag
      901 tcctcgggcg aggtctcccg ccgcaccagg atgacatgct cacccttccg cgacagctgc
      961 tcggccaggt cggcatcgaa caccgcggca cccgaggcgg cgcccggaga ggcgggaagc
     1021 cccgtggtca ggagatcgac cttcgagtcc tggtcgatgg tcgggtgcag cagctggttg
     1081 agatcgttgg gaggaatgcg ggcgaccgct tcttcctcgc tgatcgcgcc ctcgtccacc
     1141 atctcgcacg caacccgcac cgcggcgtgg cccgagcgct ggccccggcg ggtctggagc
     1201 atgaacagct tgccccgctc gatggtgaac tccatgtcct gcacgtcgcg gaagtgccgc
     1261 tccagcacct tgctgatccg ctcgagctcg gcgtaggccg ccggcatctg ctccttgagc
     1321 tcgctgatcg ggtgcacgtt gcggctgccg ctcaccacat cttcgccctg ggcgttgagc
     1381 aggtactcac cgtagagctt ggcctcgccg gtcgaggggt cgcgggtgaa cgcgacgccg
     1441 gtgccggagt cctcgcccag gttgccaaac accatcgtca cgatgttgac cgcggtgccc
     1501 atcgtgtccg ggatgtcgtg cagcttccgg tagtcgatcg cccggcgggt gttccagctt
     1561 tcgaacaccg ccgcgatcgc gccccacagc tgctccatcg gatcgtcggg gaagggcttc
     1621 ccggtttcct tgagcacgtg ggccttgaag tccgcgacca gcgccttcat ctggtcggcc
     1681 gggaggtcga tgtcacgctc gaccttcgcc ttcttcttcc gctcctccag caggtgctcg
     1741 aacggaccct tggggaggtc gaagaccacg gcggaataca tcgccacgaa gcggcggtac
     1801 gagtcgtagg cgaactgggc gttcttgctc tcggcggtga gcccctcgac cgtggtgtcg
     1861 ttgagaccga ggttgaggat cgtctccatc atgccgggca tcgacaccgc cgcgcccgag
     1921 cgcaccgaca cgagcagcgg gcgttccttg ccgccgaagt gccggttggt ggcggcctcg
     1981 atgcgctgga gactggtttc gacctgggcg cgcagccagg gcgggaactg ccgggtctcg
     2041 aggtaggtga tgcagagcga cgccgcgatg gtgaaccccg gtgggaccgg gataccgagg
     2101 ttcgtcatct ccgccaggcc ggcgcccttg ccgcccagca cgtccttcat ggtggcggtg
     2161 ccgtcggcgc ggccctgccc gaagaagtag accgaaggct gcgagtacga tccgctcatg
     2221 gtatcgtggc caggggtggg gctgcgtgac ggagcgtcac aagatcgttg gacacatcgg
     2281 tcggataccg ccccgagaag caggcgtggc accactggct gcggctcccc gcggccttga
     2341 gcatgccgtc gagcgagaga tagcccagcg agtcgacgcc gaggtactgg cggatctcct
     2401 cgatggaatg ggtcgccccg atcagctcct cgcgggtcgg ggtgtcgatg ccgtagtggc
     2461 acggcccggt gatcggcggg ctgccgagcc ggaggtgcac ctcgcgggcg ccggcggcgc
     2521 ggatcatctg caccagcccc ttgctggtcg tgccgcgcac caggctgtcg tcgaccatga
     2581 cgaccgactt gccatcgatg acgcctcgca ccgggttgaa cttgatcttc accttggcca
     2641 cccgcagcgc ctgggtcgga ttgatgaacg tccggcccac gtagtggttc cggatcagcc
     2701 cgttctccag cttgatcccg gacgactcgg cgaagcccag cgccatcgcg ttggagctgt
     2761 cggggacgct gaacaccacc tgggcccccg gcgccggatg ctgtaccgcg agctggcggc
     2821 ccagttcgcg ccgcacccgg tccaccgact cgccgaacac ccggctgtcc ggccgggcga
     2881 agtagaccag ctcgaagatg cagcggctct gcggccgcgg cttcaattca tccagatc
//
LOCUS       DATIFF010000241         9039 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1111368, whole genome shotgun sequence.
ACCESSION   DATIFF010000241 DATIFF010000000
VERSION     DATIFF010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9039
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1111368"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..639)
                     /locus_tag="VLD58_03490"
     CDS             complement(<1..639)
                     /locus_tag="VLD58_03490"
                     /inference="COORDINATES: protein motif:HMM:NF021604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HSB53387.1"
                     /translation="MTQPPENLQELAAAYALGALDPAETKAFEALLATSPEAQREVAE
                     YREVGALLALNAGGAAPAPDLKDRVIARATSQKVLRMMPRRASSGVLPWIALAASLVA
                     VVGLGVAGNGLKRELARQKGAISALQDSLASREAKLAARERELNAILNPNVSLIRMGE
                     PGTPKPVVQMFWNHQTRTMMIHAFQLSPAAGKRAYQLWFIPKNGKPIPSVTFN"
     gene            complement(636..1241)
                     /locus_tag="VLD58_03495"
     CDS             complement(636..1241)
                     /locus_tag="VLD58_03495"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSB53388.1"
                     /translation="MTEAKDLPPGPRDADLVLRMAQGDEQALSQLYDRFGRVLYAVAF
                     RVVNQQADAEEVVMEAFSQAWREAPRFDQSRGSVAAWLTMMTRSRALDLVRSQSRRER
                     ITDTAAREEPAAGPAMSAGFPTPGVSVIDEERRRAVTQALASLSPPQREAIELAYYDG
                     LSQSEIAERLKEPLGTIKTRMRLGMQRLREALRPYYFEGAV"
     gene            complement(1444..1881)
                     /locus_tag="VLD58_03500"
     CDS             complement(1444..1881)
                     /locus_tag="VLD58_03500"
                     /inference="COORDINATES: protein motif:HMM:NF042765.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6702 family protein"
                     /protein_id="HSB53389.1"
                     /translation="MRPLLLAVGLLAAHPLHTTHTDLVEAGGQVTVQVRAFTDDLTDA
                     VRQRLGAVDDSAFTRYVRGTVSLLDPDGHAVILAWTGKEVEGDITILRFRAAGLTRLS
                     GARVRQTMHMERFSDQVNVVQARYPGHQQSLLFTPGDDPKRLP"
     gene            complement(1891..2490)
                     /locus_tag="VLD58_03505"
     CDS             complement(1891..2490)
                     /locus_tag="VLD58_03505"
                     /inference="COORDINATES: protein motif:HMM:NF025167.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HupE/UreJ family protein"
                     /protein_id="HSB53390.1"
                     /translation="MSELLTYLQLGFHHVASLGALDHILFLCALAAVYRPRDWRAGLW
                     VVTAFTVGHSLSLAPVVTRLVEFPTAWIEFLIPVTIVMTAVANLLEDHATGHAPSARR
                     AIAAVVFGLVHGAGFAQYLRAMFLDSIAVPLAGFNLGIEAAQIFVLALIGLLLVAGDR
                     LLGLSSSAPRRIGFQRRVVLVSAVAAVAAGGMALARLPH"
     gene            complement(2495..3817)
                     /locus_tag="VLD58_03510"
     CDS             complement(2495..3817)
                     /locus_tag="VLD58_03510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53391.1"
                     /translation="MLVLAIGAVTVIHKDSLAALPLGRLAASPAALPSGRLAASSAAR
                     PPARLPAQQADILFYQSRVARDPYGARDRAALAALYLARGRANNDPSDFARAESLATV
                     SLATRHKRNGDAVQVLVGAMMAQHRFAEAWQAMQRDADPGEPLARATLGEIALELGRY
                     PAADSLFESLTLLRTQTAIAPRYARWLELNGRSGEARELLQATRASLEHGFRIPPEQL
                     AWFDLRLGELAQRNGRYDLASESYARGLALVPADARLLAASARLAAARQAWHQVIALG
                     EQALGGSFEPGTLGLLSEAYAATGDTARAAEYARAMEVSLSQQPGAYHRGWALFLLDH
                     HRQVERVLRRAQEELAIRKDIYGYDVVAWALHQAGRDGEARVLADSALGRGTRDPMLH
                     YHRSVIALALGDTSSARDDIAAAIAIDPRYRPGHGPAAAEIAATLHHF"
     gene            complement(3900..4481)
                     /locus_tag="VLD58_03515"
     CDS             complement(3900..4481)
                     /locus_tag="VLD58_03515"
                     /inference="COORDINATES: protein motif:HMM:NF025585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4331 family protein"
                     /protein_id="HSB53392.1"
                     /translation="MRIRSLRLMAPALLAGLALVAGACSDDNSSSTGPGKAQTYNQVQ
                     RLGNPLVSEVLLDKRSHPTHGSIGPDQDAALIGPEIFAHLVKNSPTTFAGRDSGYVGV
                     LASVLLPDMLVVQTDKDPGTASWLNWVGVPPLANGWGGRKLNDDVVDLALLAVFGDPF
                     GADPSHTTPALTTDNVGSDSPISATFPYLAPPN"
     gene            complement(4508..5236)
                     /locus_tag="VLD58_03520"
     CDS             complement(4508..5236)
                     /locus_tag="VLD58_03520"
                     /inference="COORDINATES: protein motif:HMM:NF025585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4331 family protein"
                     /protein_id="HSB53393.1"
                     /translation="MLRWRALSRTQRLAAVLVAAGALAGGVGYATASDHQDTPLVELN
                     PRMDLTDVYAFPGSAPGRIVLVMNTSGFLSPGQTAAAAFDPNILYQFKIDNDGDAVED
                     KVIQVTFKGSTPGTQQVTVRGPAAPTVVGAMMNTVNGNAPAISGDFNRNFGSAAAIQA
                     FAGPRDDPFFLDLEAAFCILPDRRPASGALSQPCALPSAGFRNPGVNYIAGYNVLSIV
                     VELPSSMIENGAPGKLGIWGTISR"
     gene            complement(5407..6516)
                     /gene="thiO"
                     /locus_tag="VLD58_03525"
     CDS             complement(5407..6516)
                     /gene="thiO"
                     /locus_tag="VLD58_03525"
                     /EC_number="1.4.3.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR02352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016647 - oxidoreductase activity, acting
                     on the CH-NH group of donors, oxygen as acceptor [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine oxidase ThiO"
                     /protein_id="HSB53394.1"
                     /translation="MTQAFDVIVVGGGPVGASCARELAQTGRRVLLFERGDDRGEGWR
                     AAAGMLAAQVGARTDDPLFELGLAGRELLAELAPMLQDQTGVDIGFWQEGIARVAEDE
                     ADAAQLRSQLAWQRQQGHLCDWFDAGEVKTRWPWLGPTHGAFWAPRDAALHPDRLVQA
                     LLLDAAKLGVVTVKDTVVSVERRGDRVIGVKAAESYSAPDVVIAGGAWSGQIGGLPRP
                     LTVEPIRGQMAALAWPTGIAPAIVIGKGCYIVAREGEAVVGSTMEHAGFAPEVTAAGL
                     AEIFTGVSALCPSLAKGEVLRTWAGLRPVSPDGLPIVGREPRVEGLWYATAHGRNGIL
                     LSGITGVLICRLLAGENEMEELAPLRPERFWDWRE"
     gene            6592..6807
                     /locus_tag="VLD58_03530"
     CDS             6592..6807
                     /locus_tag="VLD58_03530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53395.1"
                     /translation="MFRNLIGFALLAIVAWFGLQLFFGLFGIIMGVLGKLIWLAFLGF
                     LIYLVLRVFAPATADRVKDTISGKPAA"
     gene            complement(7039..7998)
                     /locus_tag="VLD58_03535"
     CDS             complement(7039..7998)
                     /locus_tag="VLD58_03535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53396.1"
                     /translation="MSRYREPDLSRVRTVAIGTRPNKVDRTLLAQAPGDDHSFHGFLD
                     SLPHVLAADHLRTVAAAIASAARAKRGVVVLAGGHVIKVGLGPLLARWIEQGIITHIA
                     LNGAAAIHDFELAAFGGTSEDVERGLKDGSFGMAEETGAAMNAAINAAHQQGQGLGEG
                     LAAGLASRSELPGRDVSVLLACHQHGVPVTVHTTIGAEIIHQHPSSDGAAVGATSQRD
                     FRRLAGSLPDLDQDGVVLNLGSAVVLPEVFLKALSIARNLNAGKPAGFLAADFDMIRQ
                     YRPRMNVVERPTRDSGTGIMLTGHHEILLPLLVWAVEDLLARA"
     gene            complement(7995..8750)
                     /locus_tag="VLD58_03540"
     CDS             complement(7995..8750)
                     /locus_tag="VLD58_03540"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HSB53397.1"
                     /translation="MKILAAALLGGAMLHPAPQADTTRHAAPPSYPFQVGERFQYAAK
                     LGILRLGTAWMSVTGIDTVRGNESFVFEFGLDASAPFYKSKNVLQSWTGTQDLVSRRF
                     HQDLVENGKPRRKYFEIFPDSLFYTQENRVGTKPTVSDPLDDAAFFYFLRTLRLEVGK
                     SYSYERYFKKDLNPVKITVVKREKMEMPDGKKVDCVILNPVVGEDGLFAPRSKAMLWI
                     TDDERRIPVQIRAKLPFGTVTLQLESVTSAKAS"
     gene            complement(8747..>9039)
                     /locus_tag="VLD58_03545"
     CDS             complement(8747..>9039)
                     /locus_tag="VLD58_03545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53398.1"
                     /translation="LKNALREQEGPLLSAEGWAANAELIGRVARHARRIETVDVVERH
                     DLRQRKSRIDPWPLAKQLWRVGGKLRIRGTRPADSRPGGARAEDPELEETAR"
BASE COUNT         1448 a         2982 c         3178 g         1431 t
ORIGIN      
        1 gttgaaggtc accgacggaa tcggcttgcc gttcttcgga atgaaccaga gctgataggc
       61 ccgcttgccc gctgccggtg agagctggaa agcatggatc atcatggttc gggtctggtg
      121 gttccagaac atctggacca cgggcttcgg cgtgccgggc tcacccatcc ggatgagcga
      181 gacgttcggg ttgaggatgg cattgagctc acgctcgcgc gccgccagct tcgcctcccg
      241 gctcgccagg ctgtcctgca gcgccgagat ggcgcccttc tgccgggcca gctcccgctt
      301 gagtccgttg ccggcaacgc ccagccccac caccgccacc agcgaggcgg ccagcgcgat
      361 ccacggcagc actccgctgc tggcccgacg gggcatcatc cgcagcacct tctggctggt
      421 ggcgcgcgcg atcacccgat ccttgagatc cggggccggg gcggcgccgc ctgcgttgag
      481 cgccagcagc gcgccgacct cccggtactc cgccacctcc cgctgcgcct cgggcgaggt
      541 cgcgagcagg gcttcgaacg ccttcgtctc ggccgggtcc agtgcgccaa gggcgtaggc
      601 cgcggccaac tcctgaagat tctctggcgg ctgcgtcaca cggccccctc gaaatagtac
      661 ggacgaagcg cctcacggag cctctgcatg ccgagccgca tgcgggtctt gatggtcccc
      721 agcggctcct tcaaccgttc ggcgatctcc gactgcgaca gcccatcgta atatgccagt
      781 tcgatcgcct cccgctgcgg cggcgagagc gacgccagcg cctgggtcac cgcgcgccgg
      841 cgttcctcgt cgatgaccga cacgcctggg gtcgggaatc cggcgctcat ggccggaccg
      901 gcggcgggct cctcgcgcgc cgcggtatcg gtgatccgtt cccggcgtga ctgggaccgg
      961 accaggtcga gcgcccggct ccgggtcatc atggtgagcc acgccgccac cgacccccgg
     1021 ctctggtcga agcgaggcgc ctcccgccac gcctgcgaga acgcctccat cacgacttcc
     1081 tcggcatcgg cctgctggtt cacgacccgg aacgcgaccg catacagcac ccgtccgaaa
     1141 cggtcgtaga gctggctcaa ggcctgctcg tcaccctggg ccatgcgaag caccaggtcc
     1201 gcatcgcgcg ggccgggcgg cagatccttc gcttcagtca tcgaccatcc ggtagcccgg
     1261 gtagacggtg gggtgcgcgg agcggggttg ctgaacagga gtctaccgcc cgtcaggaac
     1321 gggccacaag actcggacat gagcccctgc aggggcattg ctgctgtcat gcgggttccg
     1381 gcgttccggg tgtaagggtg caggacctcg tccacccctg tacgccgctc gaccggaatc
     1441 ggatcagggg aggcgcttcg ggtcgtcgcc gggggtgaac aggaggctct gctgatgccc
     1501 gggatacctg gcctgtacca cgttcacctg gtcggagaaa cgctccatgt gcatcgtctg
     1561 acgcacccgg gcgccggaca ggcgggtgag accggcggcc cggaaacgga ggatcgtgat
     1621 gtcgccctcg acctccttgc cggtccatgc gaggatcacc gcatggccat cgggatcgag
     1681 gaggctcacc gtgccgcgga cgtaccgggt gaaggccgaa tcgtcgaccg cgccaagccg
     1741 ctgccggacc gcgtcggtga gatcgtcggt gaaggcacgg acctgcaccg tcacctggcc
     1801 gccggcttcc accagatccg tgtgggtggt atggagcgga tgagcagcga ggagtccgac
     1861 ggcaaggagc agcgggcgca tgccgcgatc ctagtgggga agccgcgcca acgccatgcc
     1921 accggccgcg acggccgcca ccgccgacac cagtacgact cggcgctgga agccgatccg
     1981 ccgaggggcg gaggaactga gtcccaggag ccggtcgccg gccacgagca acagcccgat
     2041 cagcgccagc acgaagatct gggccgcctc gattccgagg ttgaatccgg ccagtggaac
     2101 ggcgatggaa tcgagaaaca tcgcccggag gtactgggcg aatccggcgc cgtgcaccag
     2161 cccgaacacc accgcggcaa tcgcccggcg ggcagaaggg gcgtggccag tcgcgtggtc
     2221 ttcgagcagg ttggccaccg ccgtcatgac gatggtgacg gggatcagga attcgatcca
     2281 tgccgtcggg aactccacca gccgggtcac caccggcgcg agactcaggg aatgaccgac
     2341 ggtgaaagcc gtcaccaccc agagcccggc ccgccagtcg cgcgggcgat agaccgcggc
     2401 cagcgcgcag agaaagagga tgtggtccag cgcgccgagc gaggcgacgt gatggaaccc
     2461 gagctggaga taggtcagga gttctgacat cgctctagaa atggtggagg gtggcggcaa
     2521 tctccgccgc cgccggaccg tggcccgggc gatagcgggg atcgatggcg atggccgcgg
     2581 cgatatcgtc tcgcgcggag ctggtgtcac ccagggcgag cgcgatcacg ctgcgatggt
     2641 agtggagcat cgggtcgcgg gtgccgcggc cgagggccga atcggcgagg acgcgagctt
     2701 cgccgtctcg ccccgcctga tgcagcgccc atgcgaccac atcgtagccg tagatgtctt
     2761 tccgaatggc aagctcttcc tgtgcccgtc gcagcacccg ctccacctgc cggtgatgat
     2821 ccaggaggaa gagcgcccag ccacggtgat atgcaccggg ctgctgggac agggagactt
     2881 ccattgcgcg ggcatactcg gcggcgcggg cggtgtcgcc ggtcgcggcg taggcctcgc
     2941 tcaggaggcc gagggtgccc ggctcgaatg acccgccgag cgcctgttcg ccaagggcaa
     3001 tgacctggtg ccaagcctgg cgcgccgccg cgagtcgggc gctggcagcg aggagccggg
     3061 cgtccgccgg cacgagtgcg aggccacgcg cgtacgactc ggacgcgaga tcgtagcggc
     3121 cgttccgctg ggccagctca cccaaccgga gatcgaacca ggccagctgt tccggcggaa
     3181 tccggaaacc atgctcgagg ctcgcacggg tcgcctggag caactcgcgc gcctcgccgc
     3241 tcctgccgtt gagctcgagc cagcgggcat agcgtggcgc aatcgccgtt tgagtgcgga
     3301 gcagggtgag tgattcgaag aggctgtcgg ccgcggggta gcggcccagc tccagcgcga
     3361 tttcgccgag ggtggcacgc gcgagcggtt cgccgggatc ggcgtcacgc tgcattgcct
     3421 gccaggcctc tgcaaaacgg tgttgggcca tcatcgcgcc gaccagcacc tgcaccgcgt
     3481 caccattgcg cttgtgccgg gtggccaggc tcaccgtggc cagagactcg gcccgggcga
     3541 aatcagacgg atcgttgttg gctcgccccc gggcgaggta gagtgccgcg agggcggcgc
     3601 gatcccgggc accgtaaggg tcgcgggcga cccgggactg gtagaagagg atgtcggcct
     3661 gctgggcggg caggcgggca ggtggtcggg cggccgaaga ggcggcaagg cggccggacg
     3721 gcaaggcggc cggtgaggcg gccaagcggc caagcggcaa ggcggcaaga gaatccttgt
     3781 gaatcaccgt tacggcgccg atagccagaa ccagcatacc gaccgcaggg atagttgcac
     3841 gcattccgca gcctccaaga gaagtgactg accgctttgc cgctttgccg cctgaccgcc
     3901 tagttcggcg gcgccagata cgggaacgtc gcgctgatcg gcgagtcgct gccaacgttg
     3961 tcggtcgtca gcgccggagt ggtgtggctc gggtcggctc cgaacggatc gccgaacacg
     4021 gccagcaggg ccaggtccac cacgtcgtcg ttgagcttcc ggccgcccca gccgttggcg
     4081 agcgggggaa cgcccaccca gttgagccag ctggcggtcc cgggatcctt gtcggtctgc
     4141 acgaccagca tgtcggggag cagcacgctc gcgagcacgc cgacgtagcc cgagtcgcgg
     4201 ccggcgaagg tggtcggcga gttcttcacc aggtgggcga agatctccgg gccgatcagc
     4261 gcggcgtcct ggtccgggcc gatggagccg tgggtcgggt ggcttctctt gtcgagcagg
     4321 acctcgctca ccagcggatt gccgaggcgc tggacctggt tgtaggtctg ggccttgccc
     4381 ggaccggtgc tggaactgtt gtcgtcgctg caggcgccgg ccacgagagc caggcccgcg
     4441 agcagcgccg gcgccatgag gcgcagggaa cggatgcgca tgtcgtaggt ctccttggtg
     4501 tgcgtggtca gcggctgatg gtgccccaga tgccgagctt gccgggcgcg ccgttctcga
     4561 tcatcgagct gggcagctcg accacgatcg acagcacgtt gtagccggcg atgtagttca
     4621 caccggggtt ccggaagccg gcgctgggca gcgcgcaggg ctgggacagg gcgcccgagg
     4681 cgggacgccg atcgggcagg atgcagaacg cggcctccag atcgaggaag aacgggtcgt
     4741 cgcgcgggcc ggcgaaggcc tggatcgcgg cggcggagcc gaagttccgg ttgaagtcgc
     4801 cgctgatggc cggcgcgttg ccgttcaccg tgttcatcat cgcaccgaca accgtcgggg
     4861 ccgcggggcc gcgcaccgtc acctgctggg taccgggggt cgaacccttg aaggtcacct
     4921 gaatgacctt gtcttcgacc gcgtccccgt cgttgtcgat cttgaactgg tagaggatgt
     4981 tcgggtcgaa cgcggcggcg gcggtctggc cgggtgagag gaagccgctg gtgttcatca
     5041 ccagcacgat ccggcccggg gccgagccgg ggaacgcgta cacgtcggtg aggtccatcc
     5101 gggggttcag ttccaccagt ggcgtatcct ggtggtcgga ggccgtcgca tagcccaccc
     5161 cgccggccag cgcaccggcg gcgacgagga ctgcggcgag ccgctgggtg cgcgaaaggg
     5221 cgcgccaacg gagcatggga gtatctccag cgagagggat cacgcggcgc ccggcggaat
     5281 tgtcagggcc gcatgcaccg gtctacgccg gaggttttgc ttcggatgtt gggtttggta
     5341 cgctgttcgg gagagtagat ccggatgtgc gcgagcgccg taagggatcc tggaggctgc
     5401 ctcgagctat tccctccagt cccagaaccg ctccgggcgg agcggggcca gttcttccat
     5461 ctcgttttcg cccgccagca gccggcagat cagcaccccg gtaattcccg agagcagaat
     5521 cccgttccgc ccatgggcag tcgcgtacca gagtccttcg acgcgcggct cccgcccgac
     5581 gatggggagc ccatcgggcg agactggacg gagcccggcc caggtgcgga gcacttcgcc
     5641 cttggcgagg gaggggcaca gcgcgctcac gccggtgaag atctcggcca gtcccgcggc
     5701 cgtgacctcg ggagcgaagc cggcgtgctc catcgtgctg ccgaccaccg cctcgccctc
     5761 ccgcgcgacg atgtagcagc ccttgccgat gacgatggcg ggcgcgatcc ccgtgggcca
     5821 tgcgagcgcg gccatctggc cccggatcgg ctcgacggtg agcgggcggg gaagacctcc
     5881 gatctgtccc gaccaggccc cgcccgcaat caccacatcg ggcgcgctat agctctccgc
     5941 tgccttcacg ccaatcaccc ggtcaccgcg acgctccacc gacaccaccg tatccttgac
     6001 ggtgaccact ccgagcttgg cagcgtcgag gaggagggcc tggaccaggc gatccgggtg
     6061 cagggcagcg tctctcggcg cccagaaggc gccgtgggtg ggaccgagcc agggccagcg
     6121 ggtcttgacc tctccggcat cgaaccagtc gcagaggtgg ccctgctgcc gctgccaggc
     6181 cagctgagag cggagttggg cggcatccgc ttcatcctct gcgactcggg cgataccttc
     6241 ctgccagaag ccgatgtcga cgccggtctg gtcctggagc atcggggcca gttcggcgag
     6301 gagttcgcgg ccggcaagac cgagctcgaa gagggggtcg tcggtgcggg cgccgacctg
     6361 ggcggcgagc atgccggcgg cagcgcgcca gccctcgccc cggtcgtccc cccgttcgaa
     6421 gaggaggacg cgccggccgg tctgggccag ttcgcgggcg caggaggccc ctacgggacc
     6481 ccctccaacg acaatgacgt caaaggcttg cgtcacgttt ggaccgagga aactttctga
     6541 aacgtcgcgc gtactaggtt ggcgagactg ctttccgtgg aggaaaatag catgttccgg
     6601 aacctcatcg ggttcgccct gctggccatc gtcgcctggt tcggcctgca gctctttttt
     6661 gggctctttg gcatcatcat gggggtcctg ggcaagctca tctggctcgc cttcctcggc
     6721 ttcctgatct acctggtcct gcgggtgttc gcgccggcca cggcggatcg ggtgaaggac
     6781 acgatctccg gcaagccggc ggcctgactc cggagttgat ccaactgaaa gcgccccctc
     6841 ggtctgcttc cgagggggcg ctgttcttct cgtagcctgc aactccaaca gactaccaca
     6901 gataccggcg gattggaacg gatgaaccag attcgattcc gcgaagagga gacaggggtg
     6961 cagttggaac agcgggtccg ggggcaggaa gcgagtatcc gtacccatct gtggcatctg
     7021 tggtaagcag ttacggactc aagctcgagc gagcaggtcc tccaccgccc ataccagcag
     7081 cgggagcagg atctcgtggt gcccggtcag catgatcccc gtccccgaat cccgagtggg
     7141 ccgttccacc acgttcatcc gcggccggta ctgccggatc atgtcgaaat ccgccgcgag
     7201 gaatccggcc ggcttcccgg cattcaggtt ccgcgcgatc gacagcgcct tcaggaagac
     7261 ctcgggcaat accaccgcgc ttccgagatt gagcaccaca ccgtcctgat ccagatccgg
     7321 caatgagccg gccagccggc gaaaatcccg ctggctggtc gcgccgacgg cggccccgtc
     7381 gctcgacgga tgctggtgga tgatctcggc gccgatggtg gtgtggaccg tgacgggcac
     7441 gccgtgctgg tggcaggcga ggagcaccga cacatcccgc cccggcagct cacttcgcga
     7501 agccagtccg gcagcgagtc cttcgccgag gccctgaccc tgctggtgcg cggcgttgat
     7561 cgcggcgttc atggcggcgc cggtctcctc cgccatgccg aagctgccgt ccttgagccc
     7621 ccgctccacg tcttcgctgg tgcccccaaa ggcggcgagc tcgaagtcgt gaatcgcggc
     7681 ggcgccattc agcgcgatat gggtgatgat gccctgctcg atccagcggg cgaggagcgg
     7741 tccgagaccc accttgatga catggccacc cgcgagcacc accacccccc gcttcgcgcg
     7801 ggcggcggaa gcgatcgcgg ccgccaccgt gcgaaggtgg tcggccgcga ggacatgagg
     7861 caggctgtcg aggaacccgt ggaacgagtg gtcgtcgccc ggggcctggg ccagcagggt
     7921 gcgatcgacc ttgttgggcc gggtgccgat ggccaccgtg cgaacccggc tgagatcggg
     7981 ctcgcggtag cggctcatga ggcctttgcc gacgtcacac tctcgagctg gagggtgacg
     8041 gtcccgaagg ggagcttggc gcggatctgc accgggatcc ggcgctcgtc gtcggtgatc
     8101 cagagcatcg ccttggagcg cggcgcgaag agcccgtcct caccgaccac cgggttgagg
     8161 atgacgcagt cgaccttctt gccgtcgggc atctccatct tttcgcgctt gaccaccgtg
     8221 atcttcacgg ggttcaggtc cttcttgaaa tagcgctcgt agctgtagct cttgccgact
     8281 tcgagccgga gggtccgcag gaagtagaag aaggccgcgt cgtccagcgg atcactcacg
     8341 gtgggcttgg tgccgacccg gttctcctgg gtgtagaaga gcgaatcggg gaagatctcg
     8401 aaatacttcc tgcgcggctt cccgttttcc accaggtcct ggtggaaccg gcggctgacg
     8461 aggtcctggg tgccggtcca cgactgaagc acattcttgc tcttgtagaa cggggccgag
     8521 gcgtcgaggc cgaactcgaa gacgaaggac tcgttgccgc ggacggtgtc gatccccgtc
     8581 acgctcatcc aggccgtccc gagccggagg atgccgagct tggcggcgta ctggaagcgc
     8641 tctcccacct ggaaaggata ggagggcgga gcagcgtgcc gggtggtatc ggcctggggc
     8701 gcggggtgaa gcatcgcgcc accgagcagg gcggccgcaa ggattttcat cgtgccgttt
     8761 cctcgagttc cggatcttca gcccgggcgc cgcccggtct ggagtcggcg ggccgcgtgc
     8821 ctcggatcct cagttttccg ccgacgcgcc acagctgctt ggcgagcggc cagggatcga
     8881 tccggctctt gcgctggcgg aggtcgtgcc gttcaaccac atcgaccgtt tcgattctcc
     8941 gcgcgtgccg cgccacccgt ccgatcagct ccgcattggc ggcccatccc tcggcgctca
     9001 ggagcgggcc ttcctgctcc cgcagggcgt tcttgagac
//
LOCUS       DATIFF010000242         1661 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1572122, whole genome shotgun sequence.
ACCESSION   DATIFF010000242 DATIFF010000000
VERSION     DATIFF010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1572122"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1643)
                     /gene="gcvP"
                     /locus_tag="VLD58_03550"
     CDS             complement(<1..1643)
                     /gene="gcvP"
                     /locus_tag="VLD58_03550"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HSB53399.1"
                     /translation="MGYGGPHAAFFATRDEYKRHMPGRIIGVSKDTSGRLALRMALQT
                     REQHIRRDKATSNVCTAQVLLAVMASMYAVYHGPDGLRRIAERVHTQARMLASALRRL
                     RYHIVHRHFFDTICVEVRPANMPRILDAARARRINLRKLDHKHLCVSLDETVSVADLS
                     DLISIFSLDIALPHMLEQGDTHSEPAIAPELTRTSTYLTHPVFHRCHSETEMLRYIKR
                     LEAKDLSLTAAMIPLGSCTMKLNATTEMMPVSWREFNRIHPFAPRSDTQGYQLLFEQL
                     ESWLCEITGFAGVSLQPNAGSQGEYAGLLVIRAFHKSRGDKHRTTCLIPMSAHGTNPA
                     SAVMAGLTVVPVASDAHGNVDLNDLRAKAAQHKDTLSCLMVTYPSTHGVFESSIREIC
                     RIVHDHGGQVYMDGANMNAQVGLCRPGDFGADVCHLNLHKTFCIPHGGGGPGMGPIAV
                     APHLVPFLPDHPVVSQGRPQSCGTVSSAPWGSAAILPISYAYIALMGTDGLAEATKVA
                     ILNANYIAKRLSPHYQVLYSGANGLVAHECIVDMRPFKQ"
BASE COUNT          266 a          522 c          594 g          279 t
ORIGIN      
        1 ctctgcttga agggtcgcat gtcgacgata cactcgtgcg ccaccagccc gttggcgccg
       61 gagtagagca cctggtagtg cgggctcagc cgcttggcga tgtagttggc gttgaggatc
      121 gccaccttgg tcgcctccgc gagaccatcg gtacccatca gcgcgatgta ggcgtacgag
      181 atcggcagga tcgcagcact gccccacggc gcggacgaga ccgtgccgca gctctggggc
      241 cggccctgcg agaccaccgg gtggtcgggg aggaacggca ccaggtgcgg cgccaccgcg
      301 atcggtccca tgccgggccc gccgccaccg tgcggaatgc agaaggtctt gtgcaggttc
      361 aggtgacaga cgtcggcgcc gaagtcgccc ggccggcaga gccccacctg cgcgttcatg
      421 ttggcgccat ccatatagac ctggccgccg tgatcgtgga cgatccggca gatctcccgg
      481 atcgacgact cgaacacgcc gtgggtcgag ggataggtca ccatcaggca ggagagggtg
      541 tccttgtgct gggccgcctt ggcgcgcaaa tcgttgaggt cgacgttgcc gtgtgcgtcg
      601 cttgccaccg gcaccaccgt gagccccgcc atcaccgcgc tcgccggatt ggtgccgtgg
      661 gccgacatcg ggatcaggca ggtggtgcga tgcttgtcgc cccgcgactt gtggaaggcc
      721 cggatcacca gcaggccggc gtattcgccc tgcgagccgg cgttgggctg gagcgacaca
      781 cccgcgaagc cggtgatctc gcagagccac gactcgagct gctcgaacag gagctggtag
      841 ccctgggtgt ccgaccgggg cgcgaacgga tggatccggt tgaactcccg ccagctcacc
      901 ggcatcatct cggtggtagc gttgagcttc atggtgcagg agccgagcgg gatcatcgcc
      961 gcggtgagtg agagatcctt ggcctcgagc cgcttgatgt agcggagcat ctccgtctcg
     1021 ctgtggcagc gatgaaagac ggggtgggtc aggtacgtcg aggtccgagt gagctccggc
     1081 gcgatcgccg gctcgctgtg ggtgtcgccc tgctccagca tgtgcggcag ggcgatgtcg
     1141 agcgagaaga tcgagatcag gtcggagagg tcggccaccg acaccgtctc gtcgagcgag
     1201 acacagaggt gcttgtggtc gagcttccgc aggttgatcc ggcgggcccg ggccgcgtcg
     1261 aggatccgcg gcatgttcgc gggcctgacc tcgacacaga tggtgtcgaa gaagtgccgg
     1321 tgcacgatgt gatagcggag ccgccggagc gccgacgcca gcatccgggc ctgggtatgc
     1381 acccgttcgg cgatgcgccg gagaccatcg gggccatgat agacggcgta catgctcgcc
     1441 atgaccgcga ggagcacctg cgcggtgcag acgttgctcg tcgccttgtc ccggcggata
     1501 tgctgttccc gggtctggag cgccatgcgg agggccaggc ggccgctggt gtccttcgac
     1561 acgccaatga tccgccccgg catgtgccgc ttgtactcgt ccctggtggc gaagaacgcc
     1621 gcatgcggtc cgccgtatcc catcggcacg ccgaagcgct g
//
LOCUS       DATIFF010000243         4263 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_188321, whole genome shotgun sequence.
ACCESSION   DATIFF010000243 DATIFF010000000
VERSION     DATIFF010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4263
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188321"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..278
                     /locus_tag="VLD58_03555"
     CDS             <1..278
                     /locus_tag="VLD58_03555"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HSB53400.1"
                     /translation="MHGWGIGSRIGQLSGEVFQVNQGSLYPALMRMLRRGWIRAEWRE
                     SENRRRARYYSLTPAGRRQLAEETRTWERIAEAMNGVLRTRTAGGAA"
     gene            275..2890
                     /locus_tag="VLD58_03560"
     CDS             275..2890
                     /locus_tag="VLD58_03560"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB53401.1"
                     /translation="MSFLSDLRLRFSAMLFRHRVERDLDEELETHLELETDARRRAGL
                     PPEEARRQALLAFGGVERWKEATRDARGLALWDGLVLDLRQSMRTLRRQPGFTFAVIL
                     VLGLAVGVSTAVFSVVRTVLFSELPYPDAGRLLRVYQQNSPDNRFGLSTVDVQAILAE
                     QHSFEAFGVVQASEAALSGTGSPERVVIGRATAGFFRAIGLGPYAGRLIAPEDERHDA
                     PAVAVVTFALAERTLGGADRALGRSITLDGVSHTVVGVLPRGYQDLAGLQAVAWPALR
                     LDPPTRRGPFRFRGIGRLRPGVTLADATADLSGISERIFPVWATSFRDQRARLTPYSL
                     RRTIVGDTGRGLLLLAGAVTLVLLVAIANVATLLMVRTAGRRTELAVRTALGAGRARL
                     ARLLLTESGVLMLGVGAVGLFVAMVCIRLLQHQADPLPRIAEVALDPATLLVAALLVL
                     GSGMLVTLSPILSLRRERLERPVSVRTGADPALSRARSLLVAGEFAVALPLLVGAGLL
                     LNSFMRLSRVNPGFDPRGVTTVDVALPPARYPDPAAVQRFLTLAESRAAELPGVNAAG
                     LSTAMPPDDPGDVNNFDLLDHPVPEGTSEPVAAWSAVTPGYFTTLQVPLLEGRLFQPG
                     DTGAAPVIIVSRSWASKYYPGVSAIGRQLYSGGCRSCPPSTVIGVVGDVKYLGLSGSA
                     EAVYQPVAQAGPQRVNLMVRSSNPASREALTAAIAALDPELPLRPVRLEDRVHDSLSD
                     PRRWTTLVMGFALSAAALAALGVYGLMAYLVRNRQREIGVRIALGAEPTRVAREVTRR
                     GMGYAVAGSAVGLTIALAGGRWMEQMLFGISSHDPATLVAVVLLLLGVALVSCWLPGR
                     RAAKVNLTAALGAGE"
     gene            complement(2902..3231)
                     /locus_tag="VLD58_03565"
     CDS             complement(2902..3231)
                     /locus_tag="VLD58_03565"
                     /inference="COORDINATES: protein motif:HMM:NF038084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHCW motif cupin fold protein"
                     /protein_id="HSB53402.1"
                     /translation="MRITDIPFGITGWDEIEPVETPGEQGTVRSRTRRFGEIRVRMVE
                     YSPGYLADHWCSKGHILLCLSGELHTELEDGRRFVLRPGTSYQVADGAEKHRSTAPAG
                     ARLFIVD"
     gene            complement(3239..>4263)
                     /locus_tag="VLD58_03570"
     CDS             complement(3239..>4263)
                     /locus_tag="VLD58_03570"
                     /inference="COORDINATES: protein motif:HMM:NF016196.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
                     /protein_id="HSB53403.1"
                     /translation="PIPHTAIIQTQKERIGRVLGNFVQNHFLSKDVLAVRLKSMKVAE
                     RAARWLSEPENGSRMARHLASGVVRTMEAVPDEQVRALIQDTAVSRIKSVPVAPILGN
                     VLSAVASDRRHQMLLDEALRLASDLMEKNREELRTRIKEESPWWVPSAVDQAFQKKIE
                     SAFQRLIDEVKLEPYHPLRQKFDQTFIDFVERLKHSPELSARAETIKADLLRHPAVED
                     FAASLWERARNAAERLTTEEDSTSLEPLSRGITAIGASLLAKPERLEELDDFLTSFAA
                     SVLERHRHEVGTLIAETVRQWDPEVAAERLELAVGRDLQFIRLNGTLVGGLAGLVIYT
                     VSLLLR"
BASE COUNT          586 a         1471 c         1453 g          753 t
ORIGIN      
        1 cgatgcacgg ctggggcatc ggcagccgca tcggccagct ctccggcgag gtcttccagg
       61 tcaaccaggg ctcgctctac ccggccctga tgcggatgct ccgccggggc tggatccggg
      121 cggaatggcg cgagagcgag aaccgccgcc gggcccggta ctactccctc actcccgcgg
      181 gccggcggca gctggcggag gagacccgga cctgggagcg gatcgccgag gcgatgaacg
      241 gggtgctgcg tacccgtact gccggggggg ccgcgtgagc ttcctctccg acctccggct
      301 ccgtttctcg gccatgctct tccggcaccg cgtcgaacgc gatctcgacg aagaactcga
      361 gacccacctc gagctcgaga ccgatgcgcg ccggcgggcg ggcctcccgc cggaggaagc
      421 ccggcgccag gcgctccttg ccttcggcgg agtggagcgc tggaaagagg cgacccgcga
      481 cgcgcgggga ctcgcgctgt gggatggcct cgttctcgat ctccgccagt cgatgcgcac
      541 cctccggcgc cagccgggat tcaccttcgc cgtgattctg gtactcggcc tggcggtggg
      601 tgtgtccacc gcggtgttca gcgtggttcg caccgtcctg ttcagcgaac tgccctatcc
      661 cgacgccgga cggcttctcc gggtctacca gcagaactct cccgacaatc gctttgggct
      721 ttcgaccgtc gacgtgcagg ccatcctggc agagcagcac agcttcgagg ccttcggcgt
      781 ggtgcaggcc tcggaagcgg cgctctctgg aaccggcagc cccgagcggg tcgtgatcgg
      841 gcgggccacc gcgggattct tccgcgccat aggtctcggc ccctacgccg gccggttgat
      901 tgcgcccgaa gacgagcgcc acgatgctcc tgcggtcgcg gtggtcacct tcgcgctggc
      961 ggagcggacc ctgggtggag cggatcgggc actgggccgg agcatcacgc tcgatggtgt
     1021 gtcgcatacg gtagtgggcg tccttccccg gggctaccag gatctggccg gcctccaggc
     1081 ggttgcctgg cccgcgctcc ggctggaccc gccgactcgg cggggcccgt tccggtttcg
     1141 tggaatcggg cgacttcggc ccggtgtgac tctggccgac gccaccgccg acctgtcggg
     1201 gatcagcgaa cgcatctttc cggtgtgggc cacgagtttc cgggatcagc gagcccggct
     1261 cacgccgtat tccctccgtc gtaccatcgt cggcgatacc gggcggggtc tgttgctcct
     1321 tgctggagca gtcacgctgg tactcctggt cgcgatcgcc aacgttgcca ccctcctgat
     1381 ggtccggacc gcggggcgca ggaccgagct cgccgtgcga accgcgctgg gcgcgggacg
     1441 ggcccggctc gctcgcctgc tcctcaccga gagcggcgtc ctcatgctgg gcgtgggcgc
     1501 agtgggactc ttcgtggcca tggtctgcat caggcttctc cagcatcagg ccgacccgct
     1561 tccgcgcata gcggaagtcg cactcgatcc ggcgactctg ctcgtggcgg ctctcctcgt
     1621 gcttggatcc ggaatgctcg ttactctctc gccaatcctc tccttgagac gggaacgcct
     1681 tgagcgtccg gtctcagtcc ggaccggcgc cgacccggcg ctttcccggg cccggagcct
     1741 gcttgtggcc ggcgaattcg cggtggcgtt gcccctcctg gtcggcgccg gcctgctgct
     1801 caacagcttc atgcgcctga gccgggtgaa tcccggcttc gacccccgcg gagtgaccac
     1861 ggtggacgtg gctctcccgc cggcgcggta ccccgatcct gccgcggtac agcgctttct
     1921 caccctggcc gagtcgcgcg cagccgagct tcccggcgtg aatgcggctg gactctcgac
     1981 ggcgatgccg ccagacgatc cgggtgatgt gaacaacttc gatctgctcg accacccggt
     2041 gcccgaagga acctcggagc cggtggcggc ctggtcggcg gtcacgccag ggtacttcac
     2101 cacgctccag gtgccgctcc tcgagggaag gctcttccag ccgggcgaca ccggcgcagc
     2161 accggtcatt atcgtgagcc ggtcgtgggc ctcgaagtac tacccgggcg tctcggccat
     2221 cgggcggcag ctctactccg gtgggtgccg gtcgtgtcct ccgtcgaccg tgatcggggt
     2281 ggtgggcgac gtgaaatatc tcggcctctc cggctcagcc gaggcggtct accagccggt
     2341 ggcgcaggcg ggcccgcagc gggtcaacct gatggtccgg agctccaatc ccgcgtcccg
     2401 cgaagcactc accgcggcaa tcgcggcgct cgatccggag cttcccctcc gtcccgtgcg
     2461 gctggaggac cgggtccacg attcactctc cgatccgcga cgctggacca ccctggtcat
     2521 ggggttcgcc ctgtcggcgg ccgcactcgc cgcgctgggc gtctacgggc tgatggccta
     2581 cctggttcgc aatcgccaga gggaaatcgg agtgcggatt gcactggggg ccgagccgac
     2641 gcgcgtggcc cgggaagtca cccggcgggg gatgggatat gcggtggcag gttctgcggt
     2701 gggactgacc atcgcgctgg cgggaggccg gtggatggag cagatgctgt tcggcatctc
     2761 ctcgcacgat cccgccacgc tggttgcggt ggtgctgctg cttctcgggg tggcgctcgt
     2821 ctcctgctgg ttgccggggc gccgcgccgc gaaggtgaat ctcaccgccg cactcggcgc
     2881 cggcgagtag ctcagggtcc gtcagtccac gatgaacagc cgggcaccgg ccggggccgt
     2941 ggagcgatgc ttctcggccc cgtcggctac ctggtaactg gttccggggc ggagcacgaa
     3001 gcggcgccca tcctccagct cggtgtggag ctcgcccgag agacagagca ggatgtgtcc
     3061 cttggaacac caatggtcgg cgagataccc gggcgagtac tcgaccatcc ggacccggat
     3121 ctcaccgaac ctgcgggtgc gcgagcggac cgtgccctgc tctccaggcg tctcgaccgg
     3181 ctcgatctca tcccagcccg tgattccgaa gggaatatcg gtgatgcgca tggtcctctc
     3241 agcggagtag cagcgatacg gtgtagatca ccagcccggc gaggccccct accagcgtac
     3301 cgttgagccg gatgaactga aggtcgcgcc ccactgccaa ctccagccgc tcggccgcca
     3361 cctcggggtc ccactgccgc accgtttcag cgatcagcgt tcccacctca tgccggtggc
     3421 gttcgagcac cgaggccgcg aaactggtga gaaagtcgtc cagctcctcc agccgctcgg
     3481 gtttggcgag gagtgacgcg ccgatcgcgg tgattccgcg ggagagtggc tccagggagg
     3541 tcgaatcctc ctcggtggtg agccgttcgg ccgcgttccg ggcccgttcc cagagggagg
     3601 cagcgaagtc ttccaccgcc ggatgccgca acaggtcggc cttgatggtt tcggcccggg
     3661 cactcaactc cggagaatgc ttgagccgtt cgacgaagtc gatgaacgtc tggtcgaact
     3721 tctgccgcaa cgggtgatac ggctcgagct tgacctcgtc gatcagccgc tggaaggcgc
     3781 tttcgatctt cttctggaag gcctggtcca ccgcgctcgg cacccaccag gggctctctt
     3841 ccttgatgcg ggtgcggagt tcctcgcggt tcttctccat caggtcgctg gcgagccgga
     3901 gcgcttcgtc gagcagcatc tggtgccgcc ggtcgctcgc gacggccgaa agcacgttgc
     3961 cgaggatcgg ggcgacgggg accgacttga tccggctgac tgcggtgtcc tggatcaacg
     4021 cccgcacctg ctcatccggc accgcctcca tggtacgcac cacgccagag gccagatggc
     4081 gcgccattcg gctgccgttc tccggctcgc tcagccagcg cgccgcccgt tccgccacct
     4141 tcatcgactt gagccggacg gcgagcacgt ccttcgagag aaagtggttc tgcacgaagt
     4201 tccccagcac ccgtccgatc cgttccttct gggtctggat gatcgcggtg tgcgggatcg
     4261 gga
//
LOCUS       DATIFF010000244         2286 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_341449, whole genome shotgun sequence.
ACCESSION   DATIFF010000244 DATIFF010000000
VERSION     DATIFF010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2286
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_341449"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..652)
                     /locus_tag="VLD58_03575"
     CDS             complement(<1..652)
                     /locus_tag="VLD58_03575"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ring-cleaving dioxygenase"
                     /protein_id="HSB53404.1"
                     /translation="MQNPTSGIHHITAIAGDPQRNIDFYAGTLGLRLVKRTVNFDDPG
                     TYHFYYGDRSGQPGTLLTFFPWAGAFAGRPGAGQATTVSFAVPSGSLSWWEDRLGAHG
                     SAVVRRERFGMAYLGFKDPDGMALELVEQPATARVNLNPDSPVGAAQAIRRFQGTTLT
                     LRGVDSTARVLTDVLGLTLQAEDGSTQRFAPADASLGVVDLLRAPESRGGSMGAGSV"
     gene            complement(713..1177)
                     /locus_tag="VLD58_03580"
     CDS             complement(713..1177)
                     /locus_tag="VLD58_03580"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HSB53405.1"
                     /translation="MPTPVARDPATVLALSTFVKLRRSVNGLGARLNGPLGKDHGLTE
                     TQFGVLEALYHLGPMPQARLCEKLLVSGSNLTTVIDNLERGGLVRRDPNPEDRRAYLI
                     RLSDAGKSLIARAFPEHAVRVRALLGVLTQVEQRELGRLCRKLGLGMAAVQE"
     gene            complement(1230..1928)
                     /locus_tag="VLD58_03585"
     CDS             complement(1230..1928)
                     /locus_tag="VLD58_03585"
                     /inference="COORDINATES: protein motif:HMM:NF015892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53406.1"
                     /translation="MDQNPSFSLAVGVHHIPVQRHARYCTLGAQPATARHLWIGLHGY
                     AMLARSFTRLLAPLADEGANLVVTPEALSRFYLETERNGRHGDLIGATWLTREDRDQD
                     LADSLRYLDQLHQAIGAELRPEADVNILGFSQGAVMAARWVAAGAVTPQHLVLWGIVP
                     PEEVVPALAERMANREVTLIAGERDPFAPAGSLEALAATLARHGVRARAERFDGGHSL
                     SKELLRRLGAAGHA"
     gene            2016..>2286
                     /locus_tag="VLD58_03590"
     CDS             2016..>2286
                     /locus_tag="VLD58_03590"
                     /inference="COORDINATES: protein motif:HMM:NF012354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSB53407.1"
                     /translation="MAWLNYHHLLYFWTVAREGSITRATQKLHLTQPTISAQIKTLED
                     SLGERLFVRQGRRLVLTEVGQVVYRYAEEIFGLGRELQDVLAGGPP"
BASE COUNT          371 a          783 c          785 g          347 t
ORIGIN      
        1 gcacactgcc ggcgcccatg ctcccaccgc ggctttcagg ggcccgcagc agatcgacca
       61 cgccgagcga tgcgtcggca ggggcgaacc gctgggtgga accgtcctcc gcctggagcg
      121 tgagtccgag cacgtcggtc agcacccggg cggtcgagtc gacgccccgg agcgtcagcg
      181 tggttccctg gaaccgtcga atggcctggg cggcgccgac cggcgagtcg ggattcaggt
      241 tgacccgcgc cgtggccggc tgctcgacaa gctccagcgc catgccgtcg ggatccttga
      301 atccgaggta tgccataccg aatcgctccc tacggacgac ggcactccca tgcgcaccca
      361 ggcgatcctc ccaccaggag agcgagcctg agggaaccgc gaaggagacc gtcgtggcct
      421 gacccgcacc cggccggccg gcaaaggcac cggcccacgg gaagaaggtg agcagggtgc
      481 ccggctgacc ggagcgatcc ccgtagtaga agtggtaggt ccccgggtca tcgaagttca
      541 cggtccgctt caccagccga aggcccagcg tcccggcata gaaatcgatg ttccgctgcg
      601 gatcgcccgc gatcgcggtg atatggtgaa ttcctgaagt tgggttctgc actgcactgc
      661 tccttcgtgt gactctcaat aaccaggcga gtcctggccc ttcctgcact acctactcct
      721 gtaccgctgc catcccgaga ccgagcttgc ggcagaggcg gcctagttcc cgctgctcca
      781 cctgggtgag tacgccgagg agcgccctga ctcggacggc atgctccgga aaggcccggg
      841 cgatgaggga cttgcccgcg tcgctcagac gaatcaggta ggcccggcgg tcttcgggat
      901 tgggatcacg ccgcaccagg ccgccccgct cgaggttgtc gatgacggtg gtaaggttgc
      961 tgccgctcac cagcagtttt tcgcacaacc gggcctgagg cattggcccc aggtgataca
     1021 gggcctccag cactccaaac tgggtctcgg tgagaccgtg gtccttgccc aggggcccgt
     1081 tgagccgggc gccgagcccg ttcaccgagc ggcgcagctt gacgaaggtg ctgagcgcca
     1141 ggacggtagc gggatcgcgg gcgacaggtg tcggcattag ttcgacctcg tattgttcga
     1201 cgtcgaatat aatacagacg ccagccgcgt caagcgtggc cggcggcgcc cagccggcgg
     1261 agcagctcct ttgagagact gtggccgccg tcgaaccgtt cggcccgggc ccggacccca
     1321 tgacgggcca gggttgccgc cagggcctcg agcgaccccg ccggcgcgaa gggatcccgc
     1381 tccccggcga tgagcgttac ctcgcggttc gccatccgct ccgccagggc cggcaccacc
     1441 tcttccggcg ggacgatgcc ccagagcacc aggtgctgcg gagtcaccgc ccccgccgcc
     1501 acccagcgcg ccgccatcac cgccccctgc gagaagccca ggatgttcac atcggcctcg
     1561 gggcgcagct ccgcgccgat cgcctgatgc agctggtcga ggtagcgaag cgagtcggcc
     1621 aggtcctgat cccggtcctc ccgggtcagc caggtggccc cgatcaggtc gccgtgacgg
     1681 ccgttgcgct cggtttcgag gtagaagcgc gagagcgcct cgggcgtgac caccagattg
     1741 gcgccctcat cggccagcgg cgccaggagc cgggtgaacg acctggccag catggcgtag
     1801 ccatgaagcc cgatccagag gtggcgcgcc gtcgctggct gggcgccgag ggtgcagtag
     1861 cgggcgtggc gctgcaccgg gatatggtgc acaccgaccg cgagcgagaa ggagggattc
     1921 tggtccatgc caaatgctac ggcatggcgg gccccggggc gaggcggccc agcgtacccc
     1981 tgcgtctcgg ccctgccgtg tgatacattc gccccatggc ctggctcaac tatcaccatc
     2041 tgctctactt ctggacggtg gcgcgggaag gcagtatcac gcgcgccacc cagaagctgc
     2101 acctcaccca gcccaccatc agcgcccaga tcaagacgct ggaggactcg ctgggggagc
     2161 ggctcttcgt gcggcagggg cggcggctgg tgctcaccga ggtgggccag gtggtgtacc
     2221 gctacgccga ggagatcttc ggcctcggcc gggagctgca ggatgtgctg gcgggggggc
     2281 cccccg
//
LOCUS       DATIFF010000245         2266 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1880285, whole genome shotgun sequence.
ACCESSION   DATIFF010000245 DATIFF010000000
VERSION     DATIFF010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2266
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1880285"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1428
                     /locus_tag="VLD58_03595"
     CDS             <1..1428
                     /locus_tag="VLD58_03595"
                     /inference="COORDINATES: protein motif:HMM:NF019589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53408.1"
                     /translation="PATRHVVYEVDLKELGYGPQPFVIADAAMYADGRHIVHFSDMSL
                     QLTGATREDIDAFWHRHPGGALAQAPGDRRPAVFTRSQLEEFASGKPSAVFGAPYAVF
                     DSGRFIARLPSPPYLCMDRLTRVEPPPWVLRPDGWVEAEFDVQPDAWHIAAERTGRVP
                     YCVLLETALQPCGWLAAYMGSALKSENPLHFRNLGGHGIVRRSVSADAGTLRARARLT
                     HASEVTDMIIEHYDFEVHGSEGLVYDGSTYFGFFTRSALERQEGIRDAPPAAFRPPAG
                     EPAGKAARELKDEPPLTPDDRKRSPAQGLSLPARALRMIDRIELYLPHGGPDRLAFVR
                     GVKDVDPQEWFFKAHFYQDPVCPGSLGIESFLQLLKFAAGERWPQLESSHRFTTAIGR
                     DHHWTYRGQILPSNRRVTVEAAVTEVVEAPLPALFAEGYLMVDGLCIYHMKDFGIQLI
                     PVGAKAHLAGRASSAAGGESSQGAP"
     gene            1425..>2266
                     /locus_tag="VLD58_03600"
     CDS             1425..>2266
                     /locus_tag="VLD58_03600"
                     /inference="COORDINATES: protein motif:HMM:NF006720.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP synthase III"
                     /protein_id="HSB53409.1"
                     /translation="MKYSRVAIQSFGYELPSHVVTSDDLERRLEPMYAALKIQRGQLE
                     AMTGIRERRYWDPGYPLHRGAARAGRKAIEAAGIGAERIGMLIYGAVCRENLEPASAC
                     AVADALGLAPECQIYDVSNACLGVLNGMVNVANAIELGQIQTGLVVACESAREIVDLT
                     IDRLNREKNMEVLRRTVATLTGGSGAVAVLLSDPALTGRGHRILGGAARNASEHHRLC
                     VWGPDTGLPGGTRHMAETDAIRVLQNGVALGIDTFQEFRKTLSLPAGKPDKIICHQVG
                     ATHQR"
BASE COUNT          362 a          810 c          737 g          357 t
ORIGIN      
        1 cccgcgaccc gccacgtggt ctacgaggtg gacctcaagg agctgggcta cgggccgcag
       61 ccgtttgtca tcgccgacgc cgccatgtat gccgacggcc gccacatcgt tcatttcagc
      121 gacatgtcgc tgcagctgac cggggccacc cgcgaggaca tcgacgcgtt ctggcaccgg
      181 caccccggcg gagcccttgc ccaggcgccc ggggaccgac gcccggcagt cttcacccgc
      241 agccagctgg aggaattcgc gagcggcaag ccctcggctg tgttcggcgc cccatacgca
      301 gttttcgact cgggccgctt catcgcacgc ctgccctccc ctccctatct ctgcatggat
      361 cgcctcacgc gggtcgagcc gcccccctgg gtgctcagac cggacggctg ggtcgaagcg
      421 gagttcgacg tgcagcccga cgcctggcac atcgccgccg agcgcaccgg ccgggtccct
      481 tactgcgtcc tgctcgagac ggcccttcag ccctgcggat ggctggcggc ctacatggga
      541 tcggcgctga aaagcgaaaa ccccctgcac ttccgcaacc tcggagggca tggcatcgtg
      601 cggcgcagcg tttccgccga cgccggcacc ctgcgggccc gggctcgcct gacccatgcc
      661 tccgaggtca ccgacatgat catcgagcac tacgatttcg aggtccatgg atcggagggc
      721 ctggtttacg acggctccac ctatttcggc tttttcaccc gctccgccct ggaacggcag
      781 gagggcatcc gcgacgcgcc gccagcggcg ttccggcccc ccgccggcga gccggccggg
      841 aaagcggcac gggagctgaa agacgagccg cccctgacgc ccgatgatcg aaagcgcagc
      901 ccggcccagg ggctcagcct gccggcccgg gccctgcgca tgatcgaccg gatcgagctg
      961 tatctgcccc acgggggacc ggaccggctc gcgttcgtgc ggggggtcaa ggacgtcgac
     1021 ccgcaggagt ggtttttcaa ggcccacttt taccaggacc cggtgtgccc cggttccctc
     1081 ggcatcgagt cgttcctgca gctgttgaag tttgcagcgg gcgagcgctg gccgcagctg
     1141 gaatcctccc atcgtttcac gacggcgatc ggccgggatc accactggac ctaccgcggc
     1201 cagatcctgc cctccaaccg gcgcgtgacg gtggaggcgg cagtcacgga agtcgtcgag
     1261 gccccgcttc ccgccttgtt tgcggaagga tatcttatgg tcgatggcct gtgtatttac
     1321 cacatgaaag acttcgggat tcagctgatt ccagttgggg ctaaagctca tttagccggg
     1381 cgagcctcaa gcgcagcggg cggtgaatcg tcccaaggag caccatgaaa tattcccgtg
     1441 tcgccatcca atccttcggc tacgagctgc catcccacgt cgtcacctcc gatgacctgg
     1501 aacgccggct cgagcccatg tacgccgccc tgaagatcca gcgcggccag cttgaggcca
     1561 tgaccggcat ccgcgaacgg cgctactggg acccgggcta cccgctgcac cggggcgcgg
     1621 cccgcgccgg ccgcaaggcc atcgaggcgg ccggcatcgg cgccgaacgg atcgggatgc
     1681 tgatctacgg cgcggtgtgc cgtgaaaacc tcgagcccgc ctcggcctgc gccgtggccg
     1741 acgccctggg cctggcgccc gagtgccaga tctacgacgt ttccaacgcc tgtctcggcg
     1801 tgctgaacgg catggtgaac gtggcgaacg ccatcgagct cggccagatc cagaccggcc
     1861 tggtggtggc ctgcgagtcc gcccgggaga tcgtcgatct caccatcgac cgcctgaacc
     1921 gcgaaaagaa catggaggtt ctgcgccgga ccgtcgccac cctgacgggg ggctccggcg
     1981 cggtggcggt tcttctgtca gaccccgccc tgaccggcag ggggcaccgc atcctcggcg
     2041 gggcggcgcg caacgcctcc gagcaccacc gcctgtgcgt gtggggcccg gacaccgggc
     2101 tgccgggcgg cacccggcac atggcggaaa ccgacgcgat ccgggtcctg cagaacgggg
     2161 tggcgctggg catcgacacc ttccaggagt tccgcaagac gctttcgctg ccggccggca
     2221 agccggataa gatcatctgc caccaagtcg gcgcgaccca tcagcg
//
LOCUS       DATIFF010000246         1451 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_649138, whole genome shotgun sequence.
ACCESSION   DATIFF010000246 DATIFF010000000
VERSION     DATIFF010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1451
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_649138"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..673
                     /locus_tag="VLD58_03605"
     CDS             <1..673
                     /locus_tag="VLD58_03605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HSB53410.1"
                     /translation="GGPAASYRAILGERSVSLAEGSVVLRWLHSVGAVTVDDQSHLYG
                     RCSSETQVRLGRLVGFDRISAPAITTPGATPRPRPPVNADLLRFERPERAREMGDALR
                     VEQDWTIPPGVLVDTNLVVAGELRIGKGARIRGNVKAHGEVQVGMGAVVEGSLVSRKA
                     IAIGEECWIDGPVLSEEHLRIAAGTNVGSPDAPTTVAGRTVSLGLGVMVSGQIVTEEG
                     GQTES"
     gene            955..>1451
                     /locus_tag="VLD58_03610"
     CDS             955..>1451
                     /locus_tag="VLD58_03610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53411.1"
                     /translation="MTDMTSRNRSTRALGLAAAALLVLSSASGLAAQTKVYPYPGDAS
                     WFPMDRFWSVLNPVDNRARITGTNPFDLNAGDNGSLQLDINGGAPTDPGFFDWAFYGT
                     LSGTNPWGKLGDVSALSMDWWRSGPPVSALAGDPWAAQTPVLRLLLGDATGSQLYGEL
                     VWEKF"
BASE COUNT          224 a          508 c          493 g          226 t
ORIGIN      
        1 gggcgggcca gccgccagct accgcgccat cctcggcgag cgctccgtca gcctggccga
       61 ggggtcggtg gtcctgcgct ggctgcacag cgtcggcgcc gtgacggtgg acgaccagtc
      121 acatctctac ggccggtgct cttcggaaac ccaggtccgc ctcggcaggc tggtgggctt
      181 cgatcggatc agcgcgccgg ccatcaccac gcccggcgcc acgccgcggc ccaggccgcc
      241 cgtgaacgcc gacctgctcc gcttcgagcg gcccgaacgg gcccgtgaaa tgggagacgc
      301 gttgcgggtc gagcaggact ggaccatccc ccccggcgtg ctggtcgaca ccaacctcgt
      361 cgtcgccgga gaactccgca tcggcaaggg cgcccggatc cgcggcaacg tcaaggccca
      421 cggcgaagtt caggtcggga tgggcgccgt ggtggaggga agcctggtca gccggaaagc
      481 catcgccatc ggcgaggagt gctggatcga cggcccggtg ctctcggagg aacatcttcg
      541 catcgccgcg ggcaccaacg tcggctctcc cgacgcgccg accacggtcg ccgggcgcac
      601 cgtctctctg gggctgggcg tgatggtgag cggccagatc gtcaccgagg agggcggcca
      661 gaccgagagc tgagacgatg cggcggcgca cgtcgctgtc gctcctgccc tacaccaggc
      721 ccttgccgga cctcgcgggc tgtcgtcgaa tcgaacggtt tcctcatcgg atgcttctgc
      781 gggcttcacc aggccttcac cggctcgcct caccggcgtc cgccgcaatc ccctaagcac
      841 tttttgcgaa acaatttgcg cccgagccac acagggaaac ccccggtctg aagcgcagag
      901 ctgccggggc ggctggaaac tgggcatatt ggttgctcag gaaggggagt ggaggtgacc
      961 gatatgacca gccggaaccg aagtacacga gcgctgggcc tcgcggccgc agccctgttg
     1021 gtgctttcga gcgcgtcggg cctcgcggct cagaccaagg tctatcccta tccgggtgac
     1081 gcctcctggt tcccgatgga tcgcttctgg agcgtgctca acccggtgga caatcgggcc
     1141 cggatcaccg ggaccaatcc cttcgacctg aacgcgggcg acaacggctc gctgcaactc
     1201 gacatcaacg gcggcgcccc gaccgacccg ggcttcttcg actgggcctt ctacggcacg
     1261 ctgtccggca ccaacccgtg gggcaagctg ggcgacgtct cggctctctc catggattgg
     1321 tggcggtcgg gtcccccggt gagcgcactc gcgggagatc cctgggccgc gcagaccccg
     1381 gtgctccgcc tgctgctcgg cgacgcgacc ggctcccagc tctacggcga gctggtctgg
     1441 gagaagttct a
//
LOCUS       DATIFF010000247         3544 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1880580, whole genome shotgun sequence.
ACCESSION   DATIFF010000247 DATIFF010000000
VERSION     DATIFF010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3544
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1880580"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1279
                     /locus_tag="VLD58_03615"
     CDS             <1..1279
                     /locus_tag="VLD58_03615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53412.1"
                     /translation="SLSGSVNQTLPSYQPVIAWGRGCADGAITPPANSTCLYNNPRWF
                     DGANETQADPAAGNQGSSATNLNNAGSLTGVTTINTPHSFLSVDNDWRAIEATLGGAI
                     RAADFKVYWGAAGKIDSVVDVTHHVPVPFDRTVLGGGFGLLTVAGTNAAGSPDNRPGV
                     VTVGDFSCVEPFRSGGPSGAWQGLIPCTSAAPFTLTDSVVLGPVAIHTSTAGNLATAA
                     SRPNGFVMYLAGHLFSFEMASATPPANTTWTLRSYTGTVFGGKGAGGNFGNYSFTPTS
                     VRPFTAVGADLLLRFNAQNAIRSPRFADLKRVHTVPDPYYVTNEYEQTTDIKVIKFVN
                     LPDKAIIRIYSASGVLVNILENPGPTCANGSVAANGTVTAVNATGGECTWNVRNRNNQ
                     VVASGVYFYHIESNSGGGSARRVGRMTIVNFAQ"
     gene            1335..2456
                     /locus_tag="VLD58_03620"
     CDS             1335..2456
                     /locus_tag="VLD58_03620"
                     /inference="COORDINATES: protein motif:HMM:NF033709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PorV/PorQ family protein"
                     /protein_id="HSB53413.1"
                     /translation="MRDALIHRVLLLAGLAGGTAAPLLAQAGTKQDNTAYGTTSAEFL
                     LLGAGARGSALGGAYSAIANDPSALYYNPAGIALMSRPGILIGTYDYIADTRYSWGGV
                     VFPFDGGSKAFGAQFGTFGFKDQPVYTVAEPDGSGATYDVSETFFGLTYAQNFSDRFS
                     AGLTGKFIADNLGDASGKAFAVDFGTNFHASLNNHPVKFSFTLANLGTNLGYSGNGLN
                     STAGRDPLPGEDPVSGIPQPSRLRTKAFPLPTTFRVGLAYDLLTSPSNRLTVISDFNQ
                     PNNNKAGFSGGFEWGSKNLGGSSFSASVRGSYTYYAANNFKPATLPTALSDEENLQGL
                     AAGGGLSYGQGTFNLSVDYAFKYMGVLGPTHFVSFGLGW"
     gene            2567..>3544
                     /locus_tag="VLD58_03625"
     CDS             2567..>3544
                     /locus_tag="VLD58_03625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53414.1"
                     /translation="MRQLLFVAGLLFAGIGNPAARDQGDAELDVRAFRFYRAEGGETL
                     VTGLIEIPYRLLTRTAEAGGKLVGNVAVSVRDSAGLELHRSAWQVKAAPTAPGRNASV
                     MEVVEFKLAAGKYDLQVTVRDSAGQAVTRTVPITAFRSPPPASDVVLSPSMRLPDAKD
                     TSLAPGERRWSGVILTPAANLRLTPVRTQLYYLLEVYPERDTMLTMSGRVLDDSGRVV
                     VSTAARTVKVQKGGSVLRGLVDLVGLPAGHYRMAVRLDEGGRVDERAGEFTMADFGET
                     MESEKVRLAGLKETDAGYFGLMSEDQLNEAEAPLVYLTRADSLAVWKSGL"
BASE COUNT          567 a         1250 c         1198 g          529 t
ORIGIN      
        1 ctcgctctcg gggtcggtga accagacgct gccgagctac cagccggtca tcgcctgggg
       61 ccgcggctgc gcggacggcg cgatcacgcc gccggccaac tcgacctgcc tctacaacaa
      121 cccgcgctgg ttcgacgggg ccaacgagac ccaggccgac cccgcggccg gcaaccaggg
      181 ttcgagcgcc accaacctga acaatgccgg gagcctcacc ggggtgacca ctatcaacac
      241 gccgcactcc ttcctcagcg tggacaacga ctggcgcgcc atcgaggcca cgctgggcgg
      301 cgcgatccgg gcggcggact tcaaggtcta ctggggcgcc gccggcaaga tcgattcggt
      361 ggtcgacgtc acccatcacg tgccggtgcc gttcgaccgg accgtgctgg gcggcgggtt
      421 cggactgctc accgtggcgg ggaccaacgc cgcgggctcc ccggacaacc gtcccggcgt
      481 ggtgacggtg ggtgacttct cctgcgtcga gccgttccgc tccggcggac cgagcggggc
      541 ctggcagggc ctcatcccct gcacctcggc ggcacccttc acgctcaccg acagcgtggt
      601 gctcgggccg gtcgcgattc acaccagcac ggcgggcaat ctcgccaccg cggcgtcccg
      661 gccgaacggc ttcgtgatgt atctggcggg gcatctcttc agcttcgaga tggccagcgc
      721 cacgccgccg gccaacacca cctggaccct ccggagctac accggcaccg tcttcggcgg
      781 caagggcgca ggcggcaact tcggcaacta ctcgttcacg ccgacctcgg tacggccgtt
      841 cacggcggtg ggcgcggacc tgctgctgcg cttcaacgcc cagaatgcca tccggtcgcc
      901 gcgcttcgcg gatctcaagc gggtccacac cgtgccggat ccgtactacg tcaccaacga
      961 gtacgagcag accacggaca tcaaggtcat caagttcgtg aacctgccgg acaaggcgat
     1021 catccggatc tacagcgcca gcggcgtcct ggtgaacatc ctggagaacc cgggacccac
     1081 ctgcgccaac ggctcggtcg ccgccaacgg gacggtcacg gcggtgaacg ccaccggcgg
     1141 cgagtgcacc tggaacgtcc gcaaccggaa caaccaggtc gtggccagcg gcgtctactt
     1201 ctatcacatc gagtccaact cgggtggggg gagcgcccgc cgggtgggcc ggatgaccat
     1261 cgtcaacttt gcccaatagg acacgaggcg cggggcgtag tgccccgcgc ctcttctcct
     1321 ggagagatcc gacaatgcga gatgccctga ttcaccgcgt gctgctcctg gccggcctgg
     1381 ccggcggaac ggccgcgccg ctcctggccc aggccgggac caagcaggac aacaccgcct
     1441 acggcaccac gtcggcggag ttcctcctgc tgggtgcggg cgcgcgcggg agcgcgctgg
     1501 gtggcgccta cagcgccatc gccaacgacc cgagcgcgct gtactacaac cccgccggta
     1561 tcgccctgat gtcgcggccc ggcatcctga tcggcaccta cgactacatc gccgacaccc
     1621 gctacagctg gggcggcgtg gtcttcccct tcgacggcgg gtccaaggcc ttcggcgccc
     1681 agttcggcac cttcggcttc aaggaccagc cggtctacac cgtggccgaa cccgacgggt
     1741 cgggcgcgac ctatgacgtg agcgagacgt tcttcgggct gacctacgcc cagaacttct
     1801 ccgaccggtt ctcggccggc ctcaccggca agttcatcgc cgacaacctg ggcgacgcga
     1861 gcggcaaggc cttcgccgtg gacttcggca ccaatttcca cgcatcgctc aacaatcacc
     1921 cggtcaagtt ctcgttcacg ctggccaatc tcggcaccaa cctggggtac agcggcaacg
     1981 ggctcaacag caccgccggg cgcgatcccc tgccgggtga agacccggtg agcggcattc
     2041 cccagccctc gcggcttcgg accaaggcgt tcccgctccc gaccaccttc cgggtggggc
     2101 tggcgtacga cctcctcacc agtccgagca accggctgac tgtcatctcc gatttcaacc
     2161 agccgaacaa caacaaggcc ggcttctcgg gcggcttcga gtggggctcg aagaacctgg
     2221 gcggctcgtc gttctcggcc tcggtccggg gcagctacac ctactacgcc gccaacaatt
     2281 tcaagccggc caccctgccc accgcgctga gcgacgagga gaatctccag ggcctcgcgg
     2341 cgggcggcgg gctgtcctac gggcagggga ccttcaacct gagcgtggac tacgccttca
     2401 agtacatggg cgtgctcggc cccacgcact tcgtgagctt cgggctgggg tggtagcagg
     2461 ccggcggtcg tcgtgatgtg ctcatgggga ggcacctccc gtctcctctg caacgtggcc
     2521 gcgcgagggc gcgcggcccg ggcacctcac ccaaggatga tgcgtcatgc gacagctgct
     2581 ctttgtcgcc ggcctcctct tcgccggcat cggtaatccc gcggcgcggg accaggggga
     2641 cgcagagctc gacgtgcggg ccttccggtt ctatcgcgcc gagggcgggg aaacgctggt
     2701 caccggcctg atcgagatcc cctaccgcct cctcacgcgt accgcggagg cgggcggcaa
     2761 gctggtgggt aacgtggcgg tgtcggtgcg cgacagcgcc gggctcgagc tgcatcgctc
     2821 ggcctggcag gtgaaggccg cgcccaccgc gccgggacgc aacgcgagcg tgatggaagt
     2881 ggtcgagttc aagctcgcgg cggggaagta cgatctccag gtcacggtgc gggattcggc
     2941 ggggcaggcg gtgacgcgca cggtgccgat caccgccttc cgcagtccgc cgccggcatc
     3001 ggacgtggtg ctctcgccca gcatgcgcct gcccgacgcg aaggacacga gcctcgcgcc
     3061 gggggaacgc cgctggagcg gggtgattct cacaccggcg gcgaacctgc ggctcacccc
     3121 ggtacggacc cagctctact acctgctcga ggtctacccg gaacgcgaca cgatgctcac
     3181 gatgtcgggg cgggtgttgg acgacagcgg ccgggtcgtg gtctccaccg ccgcgcggac
     3241 ggtgaaggtg cagaagggcg gctcggtgct ccgcgggctg gtggacctgg tcgggctccc
     3301 cgccggccat taccggatgg cggtgcggct cgacgaggga gggcgggtgg atgagcgggc
     3361 cggcgagttc accatggccg acttcggcga gacgatggag tcggagaagg tccggctcgc
     3421 ggggctcaag gaaaccgacg ccggttattt cggcctgatg agcgaggacc agctgaacga
     3481 ggccgaggcg cccctggtgt acctgacgcg ggccgactcg ctcgcggtct ggaagagcgg
     3541 gctc
//
LOCUS       DATIFF010000248         1256 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_957699, whole genome shotgun sequence.
ACCESSION   DATIFF010000248 DATIFF010000000
VERSION     DATIFF010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1256)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1256)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1256
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_957699"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..965)
                     /locus_tag="VLD58_03630"
     CDS             complement(<1..965)
                     /locus_tag="VLD58_03630"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB53415.1"
                     /translation="MTSACFRCNAPLETGVRFCPACGLSVSGEHTAPLPTLLQVLRQA
                     TLGEYEIVQEIGQGGMATVYMAHEIALDRKVAIKVMSPQFVHGAEMIARFKREARTAA
                     GLTHPHIIPIYAVKESQQILYFVMKYIRGRALDQILRDVGALPFPMVRSILADIGSAL
                     DYAHRQGVVHRDVKPGNIMIDEEGFAVITDFGIARAIEGESLTRSGTTVGTPSYLSPE
                     ACSGEAVGAAADQYALGVVGYEMITGQLPFSADSSLGMMYAQVHTQPRSSDQFRPDCP
                     PDLRDAVMRMLQKSPGDRYATMREAAQAASGLRISGGQSLGDEGVR"
BASE COUNT          192 a          421 c          432 g          211 t
ORIGIN      
        1 cggacaccct cgtcgcccag cgactgtccc ccactgatcc ggagtccgct cgccgcctgg
       61 gccgcttcgc gcatcgtagc gtagcggtcc ccgggcgact tctgcagcat gcgcatcacc
      121 gcatcgcgca ggtcgggcgg gcagtccggg cggaactggt cggaggagcg cggctgagtg
      181 tgcacctggg cgtacatcat gccgaggctc gagtcggcgc tgaagggcag ctggccggtg
      241 atcatctcgt agccgaccac gccgagggcg tactggtcgg cggcggcgcc gaccgcctcg
      301 ccggagcagg cttccggact cagatagctg ggtgtcccga cggtggtgcc gctccgggtg
      361 agcgattccc cctcgatggc gcgggcaatg ccgaaatcgg tgatgacggc aaagccttct
      421 tcgtcgatca tgatgttgcc cggcttcacg tcgcggtgga ccacgccctg gcggtgggcg
      481 tagtcgagcg cggagccgat gtcggccagg atcgagcgga ccatcgggaa gggaagggcg
      541 cccacgtcgc gcaggatctg gtcgagggcg cgcccccgga tgtacttcat cacgaagtac
      601 aggatctgct gcgattcctt gaccgcgtag atcggaatga tgtgcggatg ggtcaggccg
      661 gcggcggtgc gggcctcgcg cttgaagcgg gcgatcatct cggcgccgtg cacgaactgt
      721 ggcgacatga ccttgatcgc gaccttgcgg tcgagcgcga tctcgtgcgc catgtagacc
      781 gtggccatcc cgccctgccc gatctcctgc acgatctcgt attcgccgag tgtcgcctgg
      841 cgcaggacct ggagcagggt ggggagtggc gccgtgtgct cgccggatac gctcagcccg
      901 caggccgggc agaacctcac cccggtctcg agtggcgcgt tgcagcgaaa acaggcggaa
      961 gtcacgggca tttcggggct gatgacggac cgcggtccgg ttcctgatag ggtcctacgc
     1021 gggctgggtg ctgcggaccg cgcttctgtg gcctgcttgc cgggattcta gcatccttcc
     1081 gccctctcgg ctatcgtcga gactcatact ggttgaagtt agggtacccg gcgcggggcc
     1141 cgccccaatc cgccggcccc ccacctttgg gcgaccccac accaccccca cccgagaaaa
     1201 cggccatgga taaataccgc acaccgttaa accccccccg cgccgcgcag gcgccc
//
LOCUS       DATIFF010000249         3951 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1572695, whole genome shotgun sequence.
ACCESSION   DATIFF010000249 DATIFF010000000
VERSION     DATIFF010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3951)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3951)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3951
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1572695"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..582
                     /locus_tag="VLD58_03635"
     CDS             <1..582
                     /locus_tag="VLD58_03635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53416.1"
                     /translation="FTLTGDLAGGEQVLLDLDDLGTADFHNGGANAVSYAVTSTTATT
                     TASILAVPTNVSFVQANDRSVNARSNALSLAAATTTGNLLVVGIAWSGGSSLSSIRGA
                     STTNPLDVMAQRTGSSGSVTSGTAVTTSANDQVVGFCVSDGTCSAGSGFTARLTNNNR
                     LVEDRTQATAGSVAATGSATRSWVMIMAAFRPQ"
     gene            632..3193
                     /locus_tag="VLD58_03640"
     CDS             632..3193
                     /locus_tag="VLD58_03640"
                     /inference="COORDINATES: protein motif:HMM:NF012956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="discoidin domain-containing protein"
                     /protein_id="HSB53417.1"
                     /translation="MPAIGLPSTRPRPPRARLATAVALLALAGCRSGPPVLDHQAILA
                     RQAWWENRDFDWYRREIPFFESPDTAIDATYYYRWELLTRHLTYGSPESGYTFTEFID
                     RPFWSGAYGAISCPLGHQMYEARWLKDRRYVEDFARYWFETPGAEPRSYSNWYGDAVW
                     ASYLVTGDSAFLRTMLPHMVTQYQGWVTEHWDPDHRMFRWDGMHDGMETNINSRQTAD
                     SFAGAEGYRPTLNSYLFADARAIARAAALLGDSALASEYAGRAARLKARVQEELWDPG
                     REFFLHQFAHDEPRGVRAKSRTYQTGPFAGTPHGRELIGYVPWQFSLPDSGYEGAWRF
                     LMDTSYFAAPFGPTTVERHDPQFLVSKVCCVWSGNAWPYATSQTLTAMANLLNEYRQQ
                     VVTREDYVRLLRGFALDQRKNGRPYIAEAADPESGSWEGHDTYYHSEHYFHSGFIDQV
                     ITGLAGLRPRGDDTLEVNPLIPDGWDWFALDEVSYRGRRVSIFWDRDGTHYRGGTGLS
                     LYVDGRRVAQSDSLARLTAAMGVAPPQAPVERPVNFAVNNGRGAFPSVTASYSAPGTP
                     PHFLVDGNAWYDRSPPNRWTAAGSGNATDWVALDFGVVRPVEWVTLHFLDDGDSLRAP
                     ASYELEAWKDGAWSAIAGQQRVPGHPEGRRANTVRFARIETSKLRLVLTHRPGATSGL
                     TEIEAWAHAEPPFSAANEASGNVAINPAGQGYPAVSASWTATGSRPEEAIDGRIWYTR
                     YSRNRWSTSGTRHPSDWLAVDFGAPRRVGRVEVHFVADGRGLAAPRDYHVEYWSGGAW
                     VAAVVRRRLPERPEGSALNTVWIEPVETTRVRIVVDHAAPAATAITEVLVWREES"
     gene            3190..>3951
                     /locus_tag="VLD58_03645"
     CDS             3190..>3951
                     /locus_tag="VLD58_03645"
                     /EC_number="5.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF008277.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016857 - racemase and epimerase activity,
                     acting on carbohydrates and derivatives [Evidence IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldose epimerase family protein"
                     /protein_id="HSB53418.1"
                     /translation="MTMHRVALALLLGIQLGCAEQRPAGNAEGRHLVRQPFGTAPDGQ
                     AVELVTLSNGRGMEVRVMTYGAIIVSLKAPDRNGMPGDVVLGYDSLTGYLRESPYFGA
                     VVGRYGNRIAKGRFSLKGIEYRLAVNNGPNHLHGGVRGFDKVVWTAEPFENQRGVGVN
                     LTYTSPDGEEGYPGTLRARVTYTLTDRNEILIDYQATTDKATPVNLTNHSYFNLAGEG
                     SGDVLEHRLQIAADAFLPVDEALIPTGEWRAVAGTP"
BASE COUNT          654 a         1349 c         1356 g          592 t
ORIGIN      
        1 ttcaccctga ccggcgacct ggccggcggc gaacaggtgc tgctcgacct ggatgatctt
       61 ggcaccgccg atttccacaa cggcggcgcc aacgcggtga gctacgcggt cacctccacc
      121 acggcaacca caaccgccag tatcctcgcg gtgccgacca acgtgagctt cgtgcaggcc
      181 aacgatcgga gcgtgaacgc caggagcaac gcactgtcgc tggcggccgc aaccaccacg
      241 ggaaatctgc tggtggtcgg gatcgcctgg tcgggtggct catcgctcag cagcatccgc
      301 ggggcgagca ccaccaaccc gctggatgtg atggcccagc gcaccggtag ctcaggatcc
      361 gtgaccagtg gcaccgccgt tacgacctcg gccaacgatc aggtcgtcgg gttctgcgtg
      421 agcgatggca cctgcagcgc gggcagcggc ttcacggccc ggctgaccaa caacaaccgt
      481 ctggtggagg accggaccca ggcaaccgca ggcagcgtgg ccgcgaccgg cagcgcgacg
      541 cggagctggg tgatgatcat ggcggcgttc cggccgcaat aacccgacgg ggggcctcga
      601 cctttcaggc gcgcgccgta ccttccagcc gatgccagcc atcggcctcc cctcgacgcg
      661 cccccgtccg ccccgcgcgc gcctcgccac cgcggtggcc cttcttgcgc tggccggctg
      721 ccgctcgggg ccacccgttc tcgaccacca ggcgatcctc gcccgccagg cctggtggga
      781 gaatcgcgac ttcgactggt accgtcgcga gatccccttc ttcgagtcgc ccgataccgc
      841 gatcgacgcg acctactact accgctggga gctcctcacc cggcacctga cctacggctc
      901 ccccgagagc ggctacacct tcaccgagtt catcgaccgg cccttctggt ccggcgccta
      961 cggcgccatc agctgcccgc tgggccacca gatgtacgaa gcccgctggc tcaaggaccg
     1021 gcgctacgtg gaggatttcg cgcgctactg gttcgagacg cccggcgcgg aaccgcggag
     1081 ctacagcaac tggtacggcg acgcggtgtg ggccagctat ctcgtcaccg gcgattccgc
     1141 cttcctccgg acgatgctgc cccacatggt cacgcagtac cagggatggg tgaccgagca
     1201 ttgggatccg gaccatcgga tgttccgctg ggacgggatg cacgatggga tggagaccaa
     1261 catcaacagc cggcagaccg cggactcctt cgcgggagca gagggatacc ggccgacgct
     1321 gaacagctat ctcttcgccg acgcccgcgc gatagcccgg gcagcagcgt tactgggcga
     1381 ctcggccctg gcgagcgagt acgccggtcg cgccgcccgg ctcaaggcgc gagtgcagga
     1441 ggagctgtgg gatccggggc gggagttctt cctgcaccag tttgcccatg atgagccacg
     1501 cggggtccgg gcgaagagcc gcacctacca gaccggtccg ttcgccggca ctccgcacgg
     1561 gcgcgagctg atcggatatg tcccctggca gttcagcctc cccgactcgg gatacgaggg
     1621 ggcgtggcgc ttcctcatgg acacgtccta cttcgccgcg ccattcggtc ccaccacggt
     1681 ggagcggcac gacccgcaat tcctggtctc gaaagtctgc tgtgtctgga gcgggaacgc
     1741 gtggccctat gccaccagcc agacgctgac cgcgatggcc aatctcctca acgagtatcg
     1801 acagcaggtg gtgacccgcg aggactatgt ccggctcctc agggggttcg ccctcgacca
     1861 gcggaagaac ggccggccgt acatcgccga ggccgccgac ccggagagcg gatcgtggga
     1921 aggccatgac acgtactacc acagcgagca ctacttccat tccgggttca tcgaccaggt
     1981 gatcaccggg ctggccggcc tgcgtccgcg gggcgatgac acgctggagg tgaacccgct
     2041 gatcccggat ggctgggact ggtttgcgct cgatgaggtg tcctaccgcg gccgccgcgt
     2101 gtcgatcttc tgggaccggg acgggactca ctatcgcggg ggcaccgggc tctccctcta
     2161 cgtggacggg cgccgggtgg cgcagagcga cagcctcgcc cggctcactg ccgcgatggg
     2221 cgtggcgccg ccgcaggcgc cggtcgagcg gccggtgaat ttcgccgtga acaacggccg
     2281 cggcgccttc ccgtcggtca ccgcgtcgta cagcgccccc ggaacaccgc cgcacttcct
     2341 ggtcgatggc aatgcctggt acgatcgctc cccgccgaat cgctggaccg ccgccggctc
     2401 cggcaatgcg accgactggg tcgcgctcga tttcggcgtg gtgcgtccgg tcgagtgggt
     2461 caccctccac tttctcgatg atggcgacag cctgagggcg cccgccagct acgagctcga
     2521 ggcgtggaag gatggggcct ggtcggccat cgccggccag cagcgcgtcc cgggacaccc
     2581 ggaggggcgg cgcgccaaca cggtccggtt cgcccggatc gagacctcga agctcaggct
     2641 ggtgctgacc caccgtcccg gtgcaacaag cggtctcacc gagatcgaag cgtgggccca
     2701 tgccgagccg cccttctcag cggcaaacga ggcgagtggc aacgtcgcca tcaatccggc
     2761 ggggcaaggg tatcccgccg tctccgcctc atggaccgcg acgggcagcc gccccgaaga
     2821 ggccatcgac ggccggatct ggtacacccg ctattcccgg aaccggtggt ccacgagcgg
     2881 gacccgtcac ccgagtgact ggctcgcggt cgacttcggg gcaccgcgcc gagtgggaag
     2941 ggtcgaggtg cacttcgtgg cggatggacg tgggcttgcc gcgccgcgtg actaccacgt
     3001 ggagtactgg tcgggcgggg cgtgggtcgc ggcggtggtc cggcgccggt tgccggagcg
     3061 ccccgaaggg tcggcgctca ataccgtgtg gatagagccg gtggagacga cgcgggtacg
     3121 gatcgtggtt gatcacgccg caccggcggc gaccgccatc accgaggtcc tggtctggag
     3181 ggaggagtca tgacgatgca ccgcgtggcg ctggcgctgc tgctcggcat tcagctgggg
     3241 tgcgcggagc aacgccccgc ggggaatgcg gagggacgtc acctggtccg gcagccattc
     3301 gggaccgcac cggatggcca ggccgtggag ctggtgacgc tgagcaatgg gagggggatg
     3361 gaggtccggg tgatgaccta cggcgccatc atcgtctcgc tcaaggcgcc ggaccgcaac
     3421 ggcatgccgg gagatgtcgt gctcggctac gacagcctca cgggttacct gcgcgagtcc
     3481 ccctacttcg gcgcggtggt gggccgctac ggcaaccgga tcgcgaaggg gcgcttctcc
     3541 ctgaagggca tcgagtaccg gctggcggtg aacaacggac ccaatcacct gcatgggggc
     3601 gtgcgcgggt tcgacaaggt ggtctggacg gcagagccgt tcgagaacca gcggggagtc
     3661 ggggtgaacc tcacgtacac cagccccgat ggcgaggagg ggtatccggg gacgctgcgg
     3721 gcacgggtga cctacaccct caccgaccgg aacgagatac tcatcgacta ccaggcgacg
     3781 accgacaagg ccacgccggt gaacctcacc aaccacagtt acttcaacct cgcgggcgaa
     3841 ggatcgggcg acgtactcga gcatcgactg cagatcgcgg ccgatgcatt cctgcccgtg
     3901 gacgaagccc tgattcccac cggcgaatgg cgcgcggttg caggcactcc g
//
LOCUS       DATIFF010000250         9606 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1265556, whole genome shotgun sequence.
ACCESSION   DATIFF010000250 DATIFF010000000
VERSION     DATIFF010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9606
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1265556"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            170..1288
                     /gene="holA"
                     /locus_tag="VLD58_03650"
     CDS             170..1288
                     /gene="holA"
                     /locus_tag="VLD58_03650"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HSB53419.1"
                     /translation="MPRRTYDDLLRALGRGELAPVYYLYGSEDILKEEAARAIVDKAL
                     EPHERDFNLDQRVAASLDPEQLHALVNTLPMMAARRCVVIREIEAWRKKAGPRDVLLK
                     YLQNPSADTVLVLQESAPNEEKERNWEPDDAIADRVWSVDFAPLPPDRVPKWVAHHAK
                     RLGIIFGEGAAEHLATACGYELGALRSELEKLAGLADGEPLSRELVGDLVGVRHGETL
                     EDWVDAVLADHTTKALELTERVLGQSGMTGVRMITSLGTGLIGLQLARALHDKGTRGG
                     SLERAIFERFLKLRPFGLGDWKALARNWSRWAETWPAARIRAALRVTLEADTALKGTR
                     ISDDLGVMQGVVLQAAKRQSGKAASGTASAERMSLLNK"
     gene            1303..2199
                     /locus_tag="VLD58_03655"
     CDS             1303..2199
                     /locus_tag="VLD58_03655"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HSB53420.1"
                     /translation="MNTGIPAAMPPCRLAARTAMPLCRPAAFLLLLALAPSPARAQDD
                     PRLRDALRLAQDGASDSARVVVNNLLKTIPPTDTLFPQVVYTMGLVSRSVEDMRRNYT
                     RVSVEYANSAWADDALYRLGLLDYASGNVAGAVRQMDRIRSDYPDSPLIPTAAEWAAR
                     ALFDQRKPREACDWLGTAMSRIGDDIELRNRLEFLNGRCANLSAADTAKPDTSKKDTT
                     AAKPAPRTGFAVQIGAVNTQAAADKLAANLKGAGFTPYIVKDGALFKVRTGPWAERTK
                     AQAVAAQVRGKIGGSPFVVKEP"
     gene            2196..4793
                     /gene="mutS"
                     /locus_tag="VLD58_03660"
     CDS             2196..4793
                     /gene="mutS"
                     /locus_tag="VLD58_03660"
                     /inference="COORDINATES: protein motif:HMM:TIGR01070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HSB53421.1"
                     /translation="MSGRAADTGSTPLMQQYREIKSRHRDAILFFRMGDFYEMFFEDA
                     QVGAKVLNITLTSRGDGVPLAGVPVKAAADYLRQLIAAGHRVAICEQVEDPRLARGIV
                     KREVVETITPGAVLEESCLPGVRNNFLVALAQIEADASVSAGLAAIDLSTGEFILETV
                     DGAELAEAVARLTPAEVVMESEAQVRLEDGVLRTPRDRWEFDPELARTELARRFQLAS
                     LDGLGLGPDDAAAVGAAGALLRYIGELQPSGLPHLHRPTVRRSARHLWIDEMTRRNLE
                     LVEPLRAGARGNTLLEVLDTTLTPMGARLLRRWVLSPLREPDAIGERLDAVQVMVEDS
                     RGRARIREALDGVRDLERLAGRAAAGRATPRELGALRDSFLRLPDVLEALTSLSDRDR
                     STALSQVVEDFDLLADLGEALKQGLSDRPPAVLSDGDVIRPGYDASLDELRDLRDGGK
                     QYIATLQQRERERTGIASLKVGYNRVFGYYLEVSNAHSQKIPADYERRQTLTGAERYV
                     TPELKSYEAKVLGAEEKIGVREAELFGNLRDLVGRATERVQRTASALARADVWASLAD
                     TAVVHRYVRPAVHDGLSLTLRQCRHPVIERLMPRESFIPNDVKFDPAERLLLVTGPNM
                     AGKSTILRQIGLCVILAQMGSYVPADAAEIGVVDRLFTRVGASDNLARGQSTFMVEMS
                     ETSAILHNATKRSLVLLDEIGRGTSTYDGVAIAWAVSEHLHDKVGCRTMFATHYHELM
                     QLPEKLAHARNLNVAVRESGDQVVFLHRLEAGGTDRSYGVHVAQLAGLPQGVVKRARE
                     VLKTLEGDHRVVPGTPPAEDPAQLGFFAEGSRPHPVMEELKTLDVNRMTPIEALNLLA
                     DLKRRSEDG"
     gene            4790..5134
                     /locus_tag="VLD58_03665"
     CDS             4790..5134
                     /locus_tag="VLD58_03665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53422.1"
                     /translation="MSSVAALAWLYPGQDFLKQVNLATAVFAAVLVLAVIVVIKIGKA
                     LLLSAMFGAMAAGVSIGQGNSPALAGRHAAIAFGVAAITLFLIKTTRSLLLWLAITGL
                     GVLALFVFDGLR"
     gene            5145..5561
                     /locus_tag="VLD58_03670"
     CDS             5145..5561
                     /locus_tag="VLD58_03670"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HSB53423.1"
                     /translation="MSRSPRRHLPPLALCLAAACSRPDGNTVRLPENDPVRKGEEPPV
                     AVNATSPVEYPPALFARGIEGRVLLRLHVDETGHIAQESTKVAESSGYPALDSAALAA
                     VPRFQFAPALMNGTPVAATFMQPVHFRHPQAGGTTP"
     gene            5558..6946
                     /locus_tag="VLD58_03675"
     CDS             5558..6946
                     /locus_tag="VLD58_03675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HSB53424.1"
                     /translation="MTPPHQKAYDSVLPTIGWTPLIRLQRIGAGLRTPIYGKAEYANP
                     GGSVKDRIGLKIIEDAERRGELKPGGTIVEGTSGNTGVGLALAAALKGYRCIFTMPDK
                     MSQEKVRLLKAYGAEVVITPTAVPPDHPDNYVNKAKQIVKDTPNAILANQFFNQVNPE
                     AHYETTGPEIWTQTEGKVTHYVAGAGTGGTVSGAGKYLKEKNPKIKVIAGDPQGSLYA
                     GYSKTKKLGDGYPYKVEGIGGDKIPSTIWFEYIDDFRQVPDRDAFSMARRLAREEGIL
                     VGGSAGLNVALALEVARELDDPTACVVTILCDTGERYLSKVFDDAWMQENQLLEVPRI
                     TVEQLLQRRPSSAPSLVSVAPAAAVRQALNLMSTWSVSQIPVLENGQCVGGLTENVLM
                     TRALATPTLLDRPVRETMDPPFPVVEASTPTDRLAPMFTRESPAALVQKDGKLIGIVS
                     RYDVLQQLIGTR"
     gene            6946..7983
                     /locus_tag="VLD58_03680"
     CDS             6946..7983
                     /locus_tag="VLD58_03680"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HSB53425.1"
                     /translation="MRITVLTGGASSERDVALASARQVVPALRSLGHSVVVVDTVTGF
                     VPESREADHLLGKVGSAPPSVAELADRERKFLLTALGALPEVREADVVFLALHGGRGE
                     DGTVQTLLDTIGVPYTGSGPIGSGIAMDKDVSKRLFRDAGVATADWMMAPVTAAEAGK
                     RLGWPIVVKPSKQGSTVGLTVVKKSEDFDGAVWYAGEFDDEVMVERYVPGRELTVGIL
                     DGQALAVGEIIPKHEIFDYECKYTPGMSEEIFPADLSSAVTAECQRLGLLAHQCLKLG
                     GYSRVDFRLTPEGGLFCLEANTLPGMTATSLLPQSGRAVGIEFAPLCDRICRSARGGT
                     PLREQPDSVRV"
     gene            8010..8858
                     /locus_tag="VLD58_03685"
     CDS             8010..8858
                     /locus_tag="VLD58_03685"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HSB53426.1"
                     /translation="MSFSSPAFPRLTPWLGRLIAVTAIVQLLLETIFVSPGITGALAM
                     DPAHFSTQPWGVFTYLFVHSGIIHLATNMLALYLFGTAVENRMGSRAFLLYYLYCGIG
                     AALFSLFLTLFMQQAPFVGASGAVLGVAVAFAMYWPDAEIIVFPIPVPIKARWLVIIL
                     AAIDVIMAKWFPGGTAHEAHIGGMLAGWLFFKAQSLSRRRPDRPPRQNAERVVMVQQT
                     ASRESEPRSTAPSRTMPLRPGNDPVAAEVDRVLDKISATGIESLTPDERRFLDEVSKR
                     KKRETN"
     gene            complement(8977..>9606)
                     /locus_tag="VLD58_03690"
     CDS             complement(8977..>9606)
                     /locus_tag="VLD58_03690"
                     /inference="COORDINATES: protein motif:HMM:NF024804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
                     /protein_id="HSB53427.1"
                     /translation="IRPMINGLSDRFREGTQGKILVHLQSGGATVEDLAKPLELTPNG
                     VRAHLAALEREGLVLVEGKRPGVRKPALVYGLTARARELLSRAYFPLLQQLLATLKDR
                     LSPAERVAVLREAGRRLAAAAPRVSGSRKDRVALAARVMGDLGGSVRVESRGRTTALV
                     GSACPLAELVRENPEVCRAVEALVAEVTGLPAREECDRGEHPRCTFVVG"
BASE COUNT         1584 a         3384 c         3134 g         1504 t
ORIGIN      
        1 gccgttagcc gttagccgtt aggtagacgc accaagccat gggtcgtggg ccgagagata
       61 cccttcctct ctcaggtccg cggcccatcg gcgtagtcgc taacggccaa tggccaatgg
      121 ctaacggccc cacatacccc ctgcctttcc gcccaactat gttcccccca tgccacgccg
      181 cacctatgac gacctgctgc gcgccctggg tcgcggagag ctggcccccg tctactatct
      241 atacggctcc gaagacattc tgaaggaaga agccgcccgg gccatcgtcg acaaggcgct
      301 ggagccccac gagcgcgact tcaacctcga tcagcgggtg gccgcttcgc tcgatcccga
      361 acagctccac gccctggtca acaccctgcc gatgatggcg gcccgccgct gcgtggtgat
      421 ccgggagatc gaggcctggc gcaagaaggc cggacccagg gatgtgctgc tcaagtacct
      481 ccagaatccc tcagccgaca ccgtgctggt gctccaggaa agcgcgccga acgaggagaa
      541 ggagcgcaac tgggagccgg atgacgccat cgccgaccgg gtctggtcgg tcgacttcgc
      601 cccactcccg cccgaccggg tgcccaagtg ggtggcccac catgccaagc ggctcggcat
      661 catcttcggc gaaggcgccg ccgaacacct cgcaaccgcc tgcggctacg aactcggcgc
      721 cctccgctct gagctcgaga agctcgcggg actcgccgac ggcgagccgc tctcccggga
      781 gctggtgggc gacctggtcg gcgtgcgcca cggcgagacc ctcgaggatt gggtcgacgc
      841 ggtgcttgcc gaccacacca ccaaggcact ggagctgacc gagcgggtac tgggacagtc
      901 gggtatgacc ggggtgcgga tgatcacctc cctcggcacc ggcctgatcg ggctccagct
      961 ggcccgggca ctccacgaca agggcactcg cggcggcagc ctggagcggg cgatctttga
     1021 gcgctttctc aagctccgcc ccttcgggct cggcgactgg aaggccctcg cccgcaactg
     1081 gagccgctgg gccgaaacgt ggcctgccgc acggatcagg gcggcactcc gtgttactct
     1141 cgaggccgac accgcactca agggcacccg aatttcagac gacctcggcg tgatgcaggg
     1201 ggttgtgctg caggcggcaa agcggcaaag cggcaaggcg gccagtggaa cggcgagcgc
     1261 ggaacgaatg tccttactca acaaatagcc gagaagccca gagtgaacac cggaatccct
     1321 gccgccatgc cgccttgccg ccttgccgcc cggaccgcca tgccgctttg ccgcccagcc
     1381 gccttcttgc tgttgctcgc cctggccccg tcccccgccc gcgcccagga cgacccccgc
     1441 ctccgcgacg ccctgcgcct cgcgcaggat ggcgccagcg attcggcccg ggtcgtggtc
     1501 aacaacctcc tcaagaccat cccgccaacc gacacgctct tcccgcaggt ggtctacacc
     1561 atgggcctgg tgtcgcggag cgtcgaggac atgcggcgga actacacccg cgtctcggtc
     1621 gaatacgcca attccgcctg ggccgatgac gccctctacc ggctcggcct cctcgattac
     1681 gcctccggca acgtggcggg ggcggtgcgg cagatggacc gcattcggag cgactacccc
     1741 gactcgcccc tgattcccac cgccgccgag tgggccgcgc gggcgctctt cgaccagcgg
     1801 aagccgcgcg aggcctgcga ctggctcggt accgccatgt cccgcatcgg cgatgacatc
     1861 gagctccgca accgcctcga gttcctgaac gggcgctgcg ccaatctctc tgccgccgac
     1921 accgccaagc ccgacacctc gaagaaggac accaccgccg ccaagcctgc ccctcgcacc
     1981 ggcttcgcgg tgcagatcgg cgcggtgaac acccaggccg ccgccgacaa gctcgccgcc
     2041 aacctcaagg gcgccgggtt cacgccctac atcgtgaagg acggcgccct cttcaaggtc
     2101 cggaccggtc cctgggccga gcgcaccaag gcgcaggccg tcgccgcgca ggtacgcggc
     2161 aagatcggcg gatcgccctt cgtggtgaag gaaccgtgag cggtcgcgcc gccgacaccg
     2221 gcagcactcc cctgatgcag cagtaccggg agatcaagtc ccgccaccgg gacgcgatcc
     2281 tctttttccg gatgggcgat ttctacgaga tgttcttcga agacgcccag gtcggcgcca
     2341 aggtcctcaa tatcacgctg acctcccggg gcgacggcgt cccgctcgcc ggcgtgccgg
     2401 tcaaggcggc ggccgactat ctccggcagc tcatcgccgc cggtcatcgc gtcgccatct
     2461 gcgaacaggt cgaagatccc cgtctcgcgc ggggcatcgt caagcgcgag gtcgtcgaaa
     2521 ccatcacacc gggtgcggta ctcgaggaga gctgccttcc cggcgtccgc aacaacttcc
     2581 tcgtggcact cgcccagatc gaggccgatg cctccgtctc ggcggggctc gccgcgatcg
     2641 atctctccac cggcgagttc atcctggaga ccgtggacgg cgccgagctt gccgaagcgg
     2701 tggcccggct gaccccggcc gaagtggtga tggaatcgga agcccaggtg cgactcgagg
     2761 acggcgtcct ccgcaccccg cgcgaccgct gggaattcga ccccgagctg gcccgcaccg
     2821 agctcgcccg acgcttccag ctcgcgagtc tcgacggact cggcctcgga cccgacgatg
     2881 cggccgcggt cggcgcggcg ggggcactgc ttcgctacat cggagagctc caaccctccg
     2941 gtctccccca tctccaccgc ccgaccgtgc gccgctcggc ccggcatctc tggatcgacg
     3001 agatgacccg gcggaacctg gagctggtcg aaccgctccg cgccggcgcc cgcggcaaca
     3061 ccctgctcga ggtactcgac accacgctca ccccgatggg agcgcgcctg ctccgacgct
     3121 gggtgctgtc gccgctccgg gaacccgacg cgatcggcga acggctcgat gcggtgcagg
     3181 tgatggtgga agacagccgg ggccgggccc ggatccgcga agcgctcgac ggggttcgcg
     3241 acctcgagcg gctcgccggc cgcgctgccg ccggccgcgc cacgccgcgc gagcttggcg
     3301 ctctccgcga ttcgttcctc cggctgcccg atgtgctcga ggcgctcacc agcctctccg
     3361 atcgcgaccg gagcaccgcc ctcagccagg tggtggaaga cttcgacctc ctggccgatc
     3421 tcggcgaagc gctcaagcag ggactgagcg accgtccgcc cgcggtgctc tccgatggcg
     3481 atgtgatccg ccccgggtac gacgcttccc ttgatgagct gcgggatctc cgggacggcg
     3541 ggaagcagta catcgccacc ctgcagcagc gggagcggga gcgcaccggc atcgcatcgc
     3601 tcaaggtggg ctacaaccgg gtgttcgggt attacctcga agtcagcaac gcccacagcc
     3661 agaagatccc ggccgactac gaacggcggc agacgctgac cggtgctgag cgctatgtca
     3721 cccccgagct caagagctac gaagccaagg tgctgggcgc ggaggagaag atcggggtcc
     3781 gtgaggccga gctgttcggc aatctccgtg acctcgtggg gcgggccacc gagcgagtgc
     3841 agcgcactgc gtcggcgctg gcccgggccg acgtgtgggc ttccctggcc gacaccgcgg
     3901 tggtccaccg ttacgtacgc ccggcggtgc acgacgggct ctcgctcacc ctgcggcagt
     3961 gccgtcaccc ggtcatcgag cggctcatgc cccgcgagtc gttcatccca aacgacgtga
     4021 agttcgaccc ggcggagcgc ttgctcctgg tgaccggtcc gaacatggcc ggcaagagca
     4081 cgatcctccg gcagatcggc ctctgcgtga tcctggcgca gatggggagc tatgtccccg
     4141 ccgatgcggc cgagatcggg gtggtggacc ggctcttcac ccgggtaggc gcgagcgaca
     4201 atctcgcccg gggccagtcg accttcatgg tggagatgag cgagaccagc gccattctcc
     4261 acaatgccac caagcggagc ctggtgctgc tggacgagat cggccgcggc acctcgactt
     4321 acgatggcgt ggccatcgca tgggcggtga gcgagcacct gcacgacaag gtggggtgcc
     4381 gcaccatgtt cgccacccac taccacgagc tgatgcagct ccccgagaag ctggcccatg
     4441 cccgcaatct caacgtggca gtgcgcgagt cgggcgatca ggtggtgttt ctgcaccggc
     4501 tcgaggcggg cgggaccgac cggagctatg gagtgcacgt ggcccagctc gcggggctcc
     4561 cgcagggtgt ggtcaagcgg gcgcgcgagg tgctcaagac cctcgagggc gaccaccggg
     4621 tggtgccggg cacgcccccg gcggaagatc cggcccagct cggcttcttc gccgaggggt
     4681 cgcggcccca tccggtcatg gaagagctca agactctcga cgtgaaccgc atgaccccga
     4741 tcgaggcgct caacctcctc gcggacctca agcgacgctc ggaagacggt tgagctccgt
     4801 ggcggcgctg gcgtggctct acccggggca ggacttcctc aagcaggtca acctcgccac
     4861 cgcagtcttc gccgcggtgc tggtgctcgc ggtcatcgtg gtcatcaaga tcgggaaggc
     4921 gctgctcctg agtgccatgt tcggcgccat ggcggcgggg gtctcgatcg gccagggtaa
     4981 ctctcccgcc ctggctggcc ggcatgccgc catcgccttc ggcgtcgctg ccattacact
     5041 cttcctgatc aagaccaccc ggagcctgct cctgtggctg gccatcacgg ggttgggtgt
     5101 gctggcgctc ttcgtctttg acgggctcag atagtgaggg accgatgagt cgatcaccca
     5161 ggcgccatct gcctcccctg gcgctctgtc tcgccgccgc ctgttcccgg cccgacggaa
     5221 acaccgtccg gctgccggag aatgacccgg tgcgcaaggg cgaggagccg ccggtggcgg
     5281 tgaatgccac ctcgccggtc gagtatccgc cggcgctctt cgcccgcggg atcgaaggga
     5341 gagtgctcct ccggctccat gtcgacgaga ccggccatat cgcccaggaa tccaccaagg
     5401 tcgctgaatc gtccggctat ccggcgctcg attcggccgc gctggctgca gtgccccgtt
     5461 tccagttcgc gcccgcgctc atgaacggca cacccgtggc cgcgactttc atgcaaccgg
     5521 tacatttccg gcaccctcag gccggaggaa cgactccgtg acgcctccac atcagaaagc
     5581 ctacgactcc gtccttccca ccatcggctg gaccccgctg atccgcctcc agcggatcgg
     5641 ggccgggctc cggaccccga tctacggcaa ggccgaatac gccaatcccg gtggctcggt
     5701 aaaggaccgg atcgggctca agatcatcga ggacgccgag cggcggggag agctcaagcc
     5761 cggcggaacc attgtggagg ggaccagcgg caacaccggc gtggggctgg cgctggccgc
     5821 cgcgctcaag ggctaccgct gcatcttcac catgcctgac aagatgtcgc aggaaaaggt
     5881 gcggctcctc aaggcgtacg gcgccgaggt agtgatcacc ccgaccgcgg ttccgccgga
     5941 tcaccccgac aactacgtga acaaggccaa gcagatcgtg aaggacaccc ccaacgcgat
     6001 cctggccaac cagttcttca accaggtgaa cccggaggcc cactacgaga ccaccggccc
     6061 cgagatctgg acccagaccg aggggaaggt cacccattac gtggcggggg caggcactgg
     6121 cggcaccgtg agcggcgccg ggaagtacct gaaggagaag aaccccaaga tcaaggtcat
     6181 cgccggcgac ccgcagggct cgctctatgc cgggtactcc aagacgaaga agctgggcga
     6241 cggctatccc tataaggtgg aaggaatcgg cggcgacaag attccgagca ctatctggtt
     6301 cgaatacatc gacgacttcc gccaggtacc cgatcgtgat gccttctcca tggcccgccg
     6361 tctggcccgt gaggagggga tcctggtcgg cggctcggcc ggtctcaacg tggcgctggc
     6421 cctggaagtc gcgcgggagc tggatgaccc caccgcctgt gtggtcacga tcctgtgtga
     6481 caccggcgag cgctacctgt caaaggtgtt cgacgatgcc tggatgcagg agaatcagct
     6541 gctcgaggtc ccccgcatca cggtggagca gctgctccag cgccggcctt ccagcgcccc
     6601 gtcactggtg agcgtggcgc cggccgctgc cgtgcggcag gcgctcaacc tgatgagtac
     6661 ctggagtgtg agccagatcc cggtgctcga gaacggccag tgcgtgggtg ggctcaccga
     6721 gaacgtgctc atgacccgcg cgctcgccac gccgaccctg ctcgaccgtc cggtgcggga
     6781 gacgatggac ccgcctttcc ctgtggtcga ggccagcacc ccgaccgacc ggctcgcgcc
     6841 gatgttcacc cgcgaaagcc ccgcggccct ggtccagaag gatgggaagc tgatcggcat
     6901 cgtgtcgcgc tacgatgtgc tgcaacagct gatcgggacc cgttgatgcg gataaccgtc
     6961 ctcaccggcg gtgcgtcctc cgagcgcgac gtggcgctcg cctccgcccg ccaggtggtc
     7021 cccgcgctcc gttcgctggg ccactcggtc gtcgtggtcg acaccgtgac cggcttcgtc
     7081 cccgagtccc gcgaggccga tcatctcctc ggcaaggtgg gaagcgcacc cccttcggtg
     7141 gcagaactgg ccgaccggga gcggaagttc ctgctcaccg ccctcggcgc cttgcccgaa
     7201 gtccgggaag ccgacgtggt gtttctcgcg ctccatggcg gccgcggcga ggatggaacc
     7261 gtccagaccc tgctcgacac cattggggtg ccgtatactg ggagcggccc gatcggcagc
     7321 ggaatcgcca tggacaagga cgtctccaag cggctcttcc gcgatgccgg tgtcgccacc
     7381 gccgactgga tgatggcgcc cgtcacggcg gcagaggcgg ggaagcggct aggttggccg
     7441 atagtggtaa agccgtcgaa gcaggggtcc acggtagggc tcaccgtggt caagaaatcg
     7501 gaggatttcg acggggcggt atggtacgcg ggcgaatttg acgacgaagt gatggtggag
     7561 cgctacgttc cgggacggga gctgaccgtc gggatcctcg acggtcaggc gctggcggtc
     7621 ggggagatca tcccgaagca cgagatcttc gactacgagt gcaagtacac tccgggcatg
     7681 tcggaggaga tctttccggc tgatctctcg tcagcggtga cggcggagtg tcagcggctg
     7741 ggtctcctgg cccaccagtg cctcaagctg ggcggctact cccgggtgga ctttcgcttg
     7801 acaccggagg gtgggctgtt ctgtttagag gcgaacaccc tccccggaat gaccgcgacc
     7861 agtctgctgc cccagtccgg cagggcggtg ggcatcgagt ttgctccact ctgcgacagg
     7921 atatgccggt ccgcccgagg ggggaccccc ctgcgggaac aaccggattc tgttcgggtt
     7981 tgatattcag gtgactcact gagcgagcga tgtccttcag cagcccggct tttccccgac
     8041 tgacaccctg gcttggccgc ctgatcgcgg tcacggccat cgtgcagttg ctgctggaga
     8101 cgattttcgt ctcaccgggc atcactggcg ccctggcgat ggaccccgcc cacttcagca
     8161 cccagccgtg gggggtcttc acctacctgt tcgtccactc cggcatcatc cacctcgcca
     8221 ccaacatgct ggcgctgtac ctgtttggga cagcagtgga aaaccggatg gggtcccgcg
     8281 ccttcctgct gtactatctg tactgcggca tcggtgcggc gctgttttcc ctgttcctca
     8341 ccctgttcat gcagcaggcc cccttcgtcg gggcctcggg tgcggtgctg ggtgtggcgg
     8401 tggcgttcgc catgtactgg ccggacgccg agatcatcgt ctttccgatc ccggtgccga
     8461 tcaaggcacg ctggctggtg atcatcctgg cggcgatcga cgtgatcatg gccaagtggt
     8521 tccccggcgg gacggcgcat gaagcccaca tcggcggcat gctggccggg tggctgttct
     8581 tcaaggccca gagcctgagc cggcggcgtc cagaccggcc cccgcgccag aacgccgagc
     8641 gggtggtgat ggtccagcag accgcgagcc gcgaatccga accccggtcc accgccccga
     8701 gccgaactat gccgctccgc ccaggaaacg atccggtcgc cgccgaagtc gatcgtgtgc
     8761 tcgacaagat cagcgcgacc ggaatcgaaa gcctcacgcc cgacgagcga cgcttcctcg
     8821 atgaagtctc gaagcggaag aaacgggaga cgaactgagg gactgcggcc attagccgtt
     8881 agccattagc tcgtacgatg taaaacgacc ctccaggcgt tgccgacgga gggtcgtttc
     8941 gcgtggtcca gccaacggct aacggctaac ggccccctac ccgaccacga acgtacaccg
     9001 cggatgctcc ccccggtcgc attcctcccg ggccggcagc cccgtcacct cggccaccag
     9061 cgcttccacc gcccggcaga cctccgggtt ctcccgcacc agctcggcca gcgggcaggc
     9121 actgccgacc agcgcggtcg tccgcccgcg cgactccacc cggacactcc ctcccaggtc
     9181 gcccatcacc cgcgccgcca atgccacccg gtccttccgt gagccgctga cccgcggtgc
     9241 agccgcggcc agccgccgtc ccgcctcccg cagcaccgcc acccgctcgg cgggggagag
     9301 tcgatccttg agggtggcca gcagctgctg gaggagcggg aagtacgcgc gggagaggag
     9361 ttcgcgggcg cgggcagtca ggccgtagac cagcgccggt ttccgcaccc cggggcgctt
     9421 gccctccacc agcaccaacc cctcccgctc gagcgcagcg aggtgggccc gaaccccgtt
     9481 gggggtgagc tcgagcggct tggcgaggtc ctcgacggtg gccccgcccg actggaggtg
     9541 aaccaggatc ttaccctggg tcccttcccg gaatctgtcg ctcaggccgt tgatcatggg
     9601 acgaat
//
LOCUS       DATIFF010000251         3649 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_649594, whole genome shotgun sequence.
ACCESSION   DATIFF010000251 DATIFF010000000
VERSION     DATIFF010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3649
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_649594"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..345
                     /locus_tag="VLD58_03695"
     CDS             <1..345
                     /locus_tag="VLD58_03695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53428.1"
                     /translation="TDSLTKVVRDTIEWKDIWERAMSRRPADARLPRPAVDFGKEMVV
                     LAAAGRLKPGDVVHIDSVGSRRDLTVIVLRYTIGCQDIRQTAYPFELAKLPRTTGAVT
                     WREHRYKAPECQ"
     gene            446..1984
                     /locus_tag="VLD58_03700"
     CDS             446..1984
                     /locus_tag="VLD58_03700"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB53429.1"
                     /translation="MNFQRKLLLGVSGMVLPALLVGAEAIRSNALERRALEALGTSLG
                     RNRTYAELETAMFNQSEVVWRYLTGFDSTAHKDFELTGQVVHYWYDRWRVELPPGQEQ
                     VAQAVLDIQREFERAGDSVLQLVDRGRRPQAYQYAVSELRNRIQPALTALNRQIYRQQ
                     RETSVQAAFGRVEAIVETERRILLGILVATLVLGVASAWLMARSLVRPLNQLRGAMAV
                     VGAGDLDHPLQASAQDEIGDLARSFAGMTDRLRESRSEMVRLNHVLAAKVAQLETTQS
                     QLVQSEKLASLGEMAAGVAHGLRNPLASLRASAQLVLRHPNSPVAGEQLQAIITEIDR
                     LDRRINHLLTFSRPAPFQPERGQVEPLLHAVLPAVSERMRQQGVALSAEFDPALPDVR
                     VDPMRLEQALLELIGNALDAMPDGGALRVAGRPLSRDGRAGVEVAITDTGRGIPPETL
                     REVGQPFFTTRPEGTGLGLATARRFVEQHGGRVDLESKVGVGTTARIWLPCEARGAGT
                     PGPA"
     gene            1994..3433
                     /locus_tag="VLD58_03705"
     CDS             1994..3433
                     /locus_tag="VLD58_03705"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSB53430.1"
                     /translation="MTTSTVLVVDDERTLARAIKAYLAENGYETEVAHDAESAVAMLG
                     TLRPDVVITDVRLPGMNGIELLKKVREFDPAISIVVMTAHGSIEGAVEAVKLGAFDYV
                     KKPIDLEELKLLADRARENTLLRQELSYYRKRESTRDLPFADVVGDSPVMKALLEQAR
                     QIAALDETPPVLITGETGTGKGLVARTIHASGARSNQPFIDVNCTALPASLMEAELFG
                     HERGAFTDAKQSKVGLFEAAEGGFIFLDEIGDLELALQGKLLRAIEDRVVRRVGGVRD
                     RKIDVRILSATNRDLEREVERDQFRRDLFFRLAVILLRLPALRERGEDVLILAEHYLK
                     RFNAKYGKDVRRISAEARAMMLNYPWPGNVRELSHVIERAVLWSKGQEVGPDHLSLTR
                     PRDETVRRSVGQLVEDSEGTGAAGVISEPASDRLTATGMTLDQVERNMLEKALRDTAG
                     NQTRAAQQLGISRDTLRYRMKKYGLSGTG"
BASE COUNT          618 a         1229 c         1242 g          560 t
ORIGIN      
        1 accgactctc tcaccaaggt ggtgcgcgac accatcgagt ggaaggatat ctgggaaagg
       61 gcgatgagcc gccggccggc cgatgctcgg ctgccccggc cggccgtgga cttcggcaag
      121 gaaatggtcg tgctggccgc ggcgggccgc ctcaagcccg gcgacgtggt acacatcgac
      181 tcggtgggca gccggaggga cctgacggtg atcgtgctcc gctacaccat cggctgtcag
      241 gacatccgcc agaccgccta tcccttcgaa ttggccaagc tgccccggac caccggcgcg
      301 gtgacctggc gggagcaccg ctataaggcg ccggagtgcc agtgaacggg gccgttagcc
      361 attagccgtt agctgcttcc gtgttgtggc gacccgcggg tcccgcccgt tcacgagtgg
      421 agctaacggc taacggccat tacacgtgaa tttccagcgc aaactcctcc tcggcgtctc
      481 cggcatggtg ctccccgccc tgctggtagg cgccgaagcc attcgcagca atgccctcga
      541 acgccgcgcc ctcgaagccc tcggcaccag cctcggccgg aaccgcacct atgccgagct
      601 ggagaccgcg atgttcaacc agagcgaagt ggtctggcgt tacctcaccg gcttcgattc
      661 caccgcgcac aaggacttcg agctgacggg ccaggtggtg cactactggt atgaccggtg
      721 gagggtggaa ctgccacccg gccaggagca ggtggcccag gccgtgctcg atatccagcg
      781 cgagttcgag cgggcgggcg acagcgtctt gcagctggtc gaccgcgggc gccggcccca
      841 ggcctaccag tacgccgtga gcgagctccg caaccggatc cagccggccc tcaccgcgct
      901 caaccgccag atctaccgcc agcagcggga gaccagcgtg caggccgcgt tcgggcgggt
      961 ggaagcgatc gtggagaccg agcggcggat cctgctcggc attctcgtcg ctaccctggt
     1021 gctcggagtc gcctcggcct ggctcatggc gcggagcctg gtccggcccc tcaaccagct
     1081 gcgcggcgcg atggccgtgg tgggcgccgg cgacctcgat caccctctcc aggccagcgc
     1141 ccaggacgaa atcggcgacc tggcgcgctc gttcgcgggc atgaccgacc ggctccgcga
     1201 atcgcgatcc gagatggtcc gactcaacca cgtgctggcc gcgaaggtgg cccagctgga
     1261 gacgacccag tcgcagctgg tccagtcgga gaagctcgcc tcccttggag aaatggccgc
     1321 gggcgtggcg catggtctcc gcaacccgct cgcgagtctc cgcgcctcgg cccagctggt
     1381 gctgcgtcac ccgaattcgc cggtcgccgg cgagcagctc caggcgatca tcaccgagat
     1441 cgaccggctc gaccggcgga tcaatcacct cctgacattc tcccgcccgg ccccgttcca
     1501 gccggagcgg ggacaggtgg aaccgctcct ccacgcagtg cttccggccg tctcggagcg
     1561 gatgcggcag cagggggtgg cactcagcgc cgaattcgac ccggcactgc cggacgtccg
     1621 ggtcgatccg atgcggctgg agcaggcgct gctcgagctg atcggcaacg cgctcgacgc
     1681 catgcccgat ggcggagcgc tccgcgtcgc gggcaggcca ctttcccgcg atggccgcgc
     1741 cggggtcgag gtcgcgatca ccgataccgg ccgtggcatt ccccccgaga cgctccgcga
     1801 agtggggcag cccttcttca ccacccgccc cgaaggcacc ggactcggcc tcgccaccgc
     1861 gcgccgcttc gtcgagcagc acggcggccg ggtggacctg gagagcaagg tgggcgtggg
     1921 gaccaccgcg cgcatctggc ttccctgcga ggccaggggt gcaggcactc ccggcccggc
     1981 ttagtttgac ggcatgacca cttctactgt gctcgtggtg gacgacgagc gcacgctcgc
     2041 ccgggcgatc aaggcctatc tggccgagaa cggctacgaa accgaggtcg cccacgacgc
     2101 cgaatcggcg gtggcgatgc tggggacgct ccgccccgat gtggtgatta ccgatgtgcg
     2161 gctcccgggg atgaacggga tagagctcct caagaaggtg cgggagttcg atcccgcgat
     2221 ttccatcgtg gtgatgaccg cccacggttc catcgagggg gcggtcgagg cggtgaagct
     2281 gggcgccttc gactacgtga agaagccgat cgacctggag gagctcaagc tcctggccga
     2341 ccgggcccgg gagaacaccc tgcttcgcca ggagctctcc tactaccgga agcgggagtc
     2401 gacccgcgac ctgccgttcg cggatgtggt gggcgattcc ccggtgatga aagcgctgct
     2461 cgagcaggca cgccagatcg cggccctgga cgaaaccccg ccggtcctca tcaccggcga
     2521 gaccggcacc ggcaagggcc tcgtcgcccg gacgattcac gcctccgggg cacgcagcaa
     2581 ccagcccttc atcgacgtga actgcaccgc cctgcccgca tccttgatgg aagcggagct
     2641 gttcggtcac gagcgcggtg cgttcaccga cgccaagcag agcaaggtgg gattgttcga
     2701 ggcggcggag ggcgggttca tattcctcga cgaaatcggc gacctggagc tggcgctgca
     2761 aggcaagctc ctgcgcgcca tcgaggaccg ggtcgtgcgc agagtgggcg gggtgcggga
     2821 ccggaagatc gacgtgcgga ttctctcagc gaccaatcgc gatctcgagc gcgaagtgga
     2881 acgggaccag ttccggcgcg atctcttctt ccggctggcg gtgatcctgc tccgtctccc
     2941 ggcgcttcgg gagcggggag aggacgtgtt gatcctggcc gagcactacc tcaagcgatt
     3001 caacgcgaag tacggcaagg atgtgcgccg gatcagcgcc gaggcgcggg ccatgatgct
     3061 gaactatccc tggcccggga atgtgcggga gctgtcgcac gtgatcgagc gggccgtgct
     3121 gtggagcaag gggcaggagg tgggaccgga ccatttgagc ctgacgcgac cgcgggacga
     3181 gaccgtcagg cggtcggtcg gccagttggt cgaggattcg gagggcactg gagcggccgg
     3241 cgtcatctcg gagcctgctt cggaccgcct caccgcgaca ggaatgacac tcgatcaggt
     3301 cgagcggaac atgctggaga aggcgctccg cgacacggct ggaaaccaga cccgcgcggc
     3361 gcaacagctg ggcatctccc gggacaccct tcgctatcgg atgaagaagt acgggctgag
     3421 cggcactggg tgatatcccc caactggggg ctctgcccca gctggccagt ctcccgccgg
     3481 gtcccggcag atacactcca gtgcattacc cgccatcgac ttagaccttc caccatcgga
     3541 agtaccctgg gcggcacggc gcctgcactg tagagggcgt cgtcgggata acccttcccc
     3601 gactgggtga agaaacccaa cccattcctt ctcctttcga ggatagacc
//
LOCUS       DATIFF010000252         1472 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_34959, whole genome shotgun sequence.
ACCESSION   DATIFF010000252 DATIFF010000000
VERSION     DATIFF010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1472
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34959"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1241)
                     /locus_tag="VLD58_03710"
     CDS             complement(<1..1241)
                     /locus_tag="VLD58_03710"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSB53431.1"
                     /translation="MSPVNRNRLRFTGFVGAAFAAGLLLAGLLDLPRFGHAQQVAQLG
                     QAAAVTAPPPVGASAASRQLYDLSEAFASVAEHVKPSVVYIRAERKPGADDASGGAPR
                     MQLPPGFERFFQFGPGLQNPQQPRVEQASGSGFIVSSDGYILTNAHVVDDARQVTVRL
                     LDRHEFPAKVIGTDPSTDVAVLKINATDLTPAPLGNSDAARVGEWVLAVGNPLGDNLT
                     FTVTQGIISAKGRVLNLPNRTNRSIQDFIQTDAAINPGNSGGPLVSVQGQVVGINSAI
                     ASETGYYSGYGFAIPINLARQVMDQIIKSGHVERAALGILVRDATANDAQYVGLPEVR
                     GVLVQDFTPEGKAAEKAGLEPGDIIVAVDGRPVEYVAQLQQTIAFRKAGEMVRVEVAR
                     KGGARKTYMVPLQRVPERSEVA"
BASE COUNT          229 a          520 c          497 g          226 t
ORIGIN      
        1 gcgacctcgg agcgctccgg cacgcgctgg agcggaacca tgtaggtctt ccgcgcaccg
       61 cccttgcggg ccacctcgac cctcaccatc tcgcccgcct tccggaaggc gatggtctgc
      121 tgcagctgcg cgacgtactc cacgggccgg ccgtccaccg ccacgatgat gtcgccgggc
      181 tccaggccgg ccttctcggc cgccttcccc tccggtgtga agtcctgaac cagcacgccc
      241 cggacctcgg gcagccccac gtactgcgcg tcgttggcgg tcgcgtcgcg gaccaggatg
      301 ccgagcgccg cgcgctcgac gtggccgctc ttgatgatct gatccatcac ctggcgggcc
      361 aggttgatcg ggatcgcgaa gccgtacccg gagtagtagc ccgtctcgct cgcgatcgcc
      421 gagttgatgc caacaacctg accctgcacg ctgaccagcg gcccgcccga gttgccgggg
      481 ttgatcgccg cgtcggtctg aatgaagtcc tggatgctgc gattcgtccg gttcggcagg
      541 ttcagcaccc ggcccttggc gctgatgatg ccctgggtga cggtgaacgt gaggttgtcg
      601 ccgagagggt tgcccacggc cagcacccac tcgcccacac gggcggcgtc gctgttgccg
      661 agcggcgccg gcgtgaggtc ggtcgcattg atcttcagca cggcgacgtc ggtgctcggg
      721 tcggtgccga tgaccttggc ggggaactcg tggcggtcca gcaaccggac ggtcacctgc
      781 cgcgcgtcgt ccaccacgtg cgcattggta aggatgtagc cgtcactgga gacgatgaac
      841 ccggagcccg aggcctgctc cacccggggc tgctgggggt tctggagccc cggcccgaac
      901 tggaagaacc gctcgaatcc cggcggcagc tgcatccggg gcgcgccgcc gctcgcatcg
      961 tccgctcccg gctttcgctc ggccctgatg tagaccacgc tgggcttcac atgctccgcg
     1021 acggaggcga acgcctcgct cagatcgtag agctgccgcg aggcggccga tgcgcccacc
     1081 gggggcggag ccgtgactgc cgccgcttgg cccagctgag ccacctgctg cgcgtgaccg
     1141 aaacggggga gatcgagcag gccggccagc aagaggccgg cggcgaaggc cgcaccgaca
     1201 aaaccggtga acctgagacg attgcgattt actggcgaca ttcaagcagc tccctgcggt
     1261 ggtccgtggc ggcctcgagg ccggaatcct gctgactagc tacggatgcc cgcgggagca
     1321 ctatggtcgc agaaatgcgg taaaacgctg gattggaggg gcgcctaccg ccccccggag
     1381 ccctcctgaa tcccgaacac gccggcggcc aggacgccgc ccgcgaacgg cccgaccaga
     1441 tagagccacc aatgcgcgag cgagccgcct cc
//
LOCUS       DATIFF010000253         2137 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_189084, whole genome shotgun sequence.
ACCESSION   DATIFF010000253 DATIFF010000000
VERSION     DATIFF010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2137)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2137)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2137
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189084"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(300..1751)
                     /locus_tag="VLD58_03715"
     CDS             complement(300..1751)
                     /locus_tag="VLD58_03715"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB53432.1"
                     /translation="MIQMTGMFQAPVRLLDVSRLARYVGAERQAALMAQAAQVREAMA
                     GRVLWNVNSTATGGGLAEMLAQLVAYASGAGVDSRWLVAEGHPDFFAIMKRVRNGLYG
                     GPGDGGELGRAEQRVYQEVTEANLEQLCERVRPGDVVILHDPQTAGLCRIREELGVPV
                     VWRCHVGKDEPDSWTERAWEFLRRPHLDHVDVHVFSRESYAPKWIDRDRLVVIPPSID
                     PLSAKNQPINDDTLLAILVQTGLLAGRPAAGAPTFRREDGAIGVVERQATVFREGSPP
                     PLGTRLVVQVSRWDRLKDMQGVLEGFAAGVALRGGYDDTHLSLVGPSVERVADDPEDQ
                     QVLAECAAAWGRLPEQARRRCSLVSLPMHDVEENAAIVNAIQRFAAIVVQKSLMEGFG
                     LTVSEAMWKARPVVATAVGGIRDQIVHEEHGLLLGDPTDLDGFGASLRRLLDDPDLAN
                     RLGRAAQHRVSERFLPDRHLLQWAGVLSRLGLG"
BASE COUNT          337 a          786 c          698 g          316 t
ORIGIN      
        1 gggctggccc tggctaggga aggatctctc gtaccatcgc gggctatggc gatcaccaac
       61 ggcggctctc cgctcaagcc caccaccact ccccggttcg ccgttcgcgc gctcccacga
      121 agcctaccgg gccaggaaca ggtagctccc gcagccgcag gctctgtacg gcgcgatagt
      181 cgatcaccgc cacccaccgg ggtagcaccc agtccgcgct ccagttccgc gccgcagtgg
      241 tgctcaccct gggccgcgcc cggctcggtg tcgcccttcg gccgtaccac cgcccggtgc
      301 taccccaggc ccaggcggct gagaacgccg gcccactgga gcaggtgccg gtcgggcagg
      361 aaccgctcgc tgacccggtg ctgcgccgcc cggccgagcc ggttcgccag gtcaggatca
      421 tccagcaacc gccgcaggga ggccccgaac ccgtccaggt cggtcgggtc cccgagcagc
      481 agcccgtgtt cctcgtggac gatctggtcc cggatcccgc cgacggccgt ggcgacgacg
      541 ggccgtgcct tccacatcgc ctcggagacg gtgagcccga atccctccat gaggctcttc
      601 tgcaccacga tcgccgcgaa gcgctggatc gcgttgacga tcgccgcgtt ctcctcgacg
      661 tcgtgcatcg gcagcgacac cagcgagcag cggcggcgcg cctgctcggg cagcctgccc
      721 cacgcggcgg cgcactcggc gagcacctgc tgatcctccg ggtcgtcggc gacgcgctcc
      781 acgctcggcc cgaccaggga gaggtgcgtg tcgtcgtacc cgccgcgcag ggcgaccccc
      841 gccgcgaagc cctcgagcac cccctgcatg tccttcaacc ggtcccaccg ggagacctgc
      901 acgaccaacc gggtgcccaa cggcggaggg ctgccttcgc ggaacaccgt cgcctgccgc
      961 tcgacgacac cgatcgcgcc gtcctcgcgg cggaacgtcg gcgcccccgc cgcggggcgc
     1021 ccggcgagca atccggtctg gacgaggatc gcgagcaggg tgtcgtcgtt tatcggctgg
     1081 ttcttcgcgg agagcgggtc gatcgacggg gggatcacca ccaaccggtc ccggtcgatc
     1141 cacttcggcg cgtagctctc gcgcgagaac acgtggacgt cgacatggtc gaggtgcggc
     1201 cgccgcagga actcccacgc ccgctcggtc caggagtcgg gctcgtcctt gccgacgtgg
     1261 cagcgccaca ccaccgggac gccgagctcc tcgcggatcc ggcacaaccc ggccgtctgc
     1321 ggatcgtgca ggatcacgac atcaccgggc cggacgcgct cgcacagctg ttccaggttg
     1381 gcctcggtga cctcctggta gacgcgctgc tcggcgcgtc cgagctcgcc cccgtcaccc
     1441 gggccgccgt acaacccgtt gcgaacccgc ttcatgatcg cgaagaagtc cggatgacct
     1501 tcagcgacca gccaccggct gtccaccccg gcgcccgatg cgtaggcgac gagttgggcg
     1561 agcatctcgg cgagcccgcc gccggtggcc gtcgagttca cgttccacag cacccggccc
     1621 gccatggcct cccggacctg ggccgcctgc gccatcagcg cggcttgtcg ctccgccccg
     1681 acgtagcggg cgagccggct gacgtcgaga agacgcaccg gcgcctggaa catgcctgtc
     1741 atctgtatca ttgtagccac ctcgtttccg gcccccatac tcatgggcca tggaagctgc
     1801 ctcctattcg tgagaaacga aaagtggagg tgatggagga aaggtcgacc cgattaaatc
     1861 gggtgctatc tcggtgaccg ggtagacctc gcgcagggcg gaggcggccg agatgagctt
     1921 atgcggcagc tatctgcgcc cgggccatcc gcgcgagtat acgtccagca cacgtctgct
     1981 gcgaaaacct aatacgccga gacgaatgag gttgggccgg gagtctgcca aagacgtctc
     2041 gtagactatc ggtaactact cacctggtta acttaggccg cgacggcggg cacccagggg
     2101 ttgcggtcgt gcagcatgcg caggacggcg aacgcgg
//
LOCUS       DATIFF010000254         1313 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1572853, whole genome shotgun sequence.
ACCESSION   DATIFF010000254 DATIFF010000000
VERSION     DATIFF010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1572853"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1313)
                     /locus_tag="VLD58_03720"
     CDS             complement(<1..>1313)
                     /locus_tag="VLD58_03720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HSB53433.1"
                     /translation="FRVRGDTVEIYPAYAEQAIRVEFWGDTVERITKIDPLTGRAIAQ
                     LERCAVYPAKHFVTQRPTIERAVKLIRAELAERLAVLRQAGKLLEAQRLESRTTFDVE
                     MLLEVGTCAGIENYSRHFSGRAEGERPACLLDYFPPEFLVVVDESHVSLPQIGGMYNG
                     DRARKETLVEYGFRLPSALDNRPLKFEEFMAIVPQMVAVSATPGDLELSLSQGQVVEQ
                     IIRPTGLVDPEVEIRPVRGQVDDLLGEIRERARKRERVLVTTLTKRMAEDLTDYLQQT
                     GVRVRYLHSDIDAIERMEILRGLRLGEFDVLVGINLLREGLDLPEVSLVAILDADQEG
                     FLRSDRSLIQTVGRAARHLNGRAILYADKMTGSMERAIAEMSRRRDLQIAHNREHGIT
                     PRSIIKSLEEVRLSTRVADARTEKKPEKRKEEQLVALDFRDPAKR"
BASE COUNT          201 a          454 c          437 g          221 t
ORIGIN      
        1 cccgcttggc cgggtcgcgg aaatcgagcg ccaccagctg ctcctctttc cgcttctccg
       61 gcttcttctc ggtgcgcgca tcggccactc gggtgctgag ccggacctct tccagcgact
      121 tgatgatgga gcgcggggtg atgccgtgct cccggttgtg ggcaatctgg agatcgcggc
      181 gccggctcat ctcggcgatg gcccgctcca tcgagccggt catcttgtcg gcgtagagaa
      241 tggcgcgccc gttcagatgc cgcgccgcgc ggccgacggt ctggatcagc gagcggtcgg
      301 agcggaggaa gccttcctgg tcggcatcga ggatggccac cagcgagacc tccggcagat
      361 cgagcccctc gcgcagcagg ttgatcccca ccagcacgtc gaattccccg aggcgcaggc
      421 cccgcaggat ctccatccgc tcgatggcgt cgatgtcgga gtggaggtac cgcacccgga
      481 cgccggtctg ctggagataa tcggtgagat cctccgccat cctcttggtc agggtggtga
      541 ccagcacccg ctcgcgcttc ctggcccgct cccggatctc gccgagcagg tcgtccacct
      601 gtccccgcac cggccgaatc tcgacctcgg ggtcgaccag accggtggga cggatgatct
      661 gctcgaccac ctgcccctga ctgagcgaaa gctccaggtc accgggcgtg gcggagaccg
      721 ccaccatctg cggcacgatg gccatgaact cttcgaactt gagcgggcgg ttgtcgaggg
      781 cgctgggaag ccggaagccg tactccacca gagtctcctt gcgggcccgg tcgccattgt
      841 acatcccgcc gatctgcggc aggctcacgt gcgactcgtc caccaccacc aggaactcgg
      901 gcgggaagta gtcgagcagg caggcggggc gttccccttc ggcccggccg gagaaatgcc
      961 gcgaatagtt ctcgatcccg gcgcaggtcc ccacctcgag cagcatttcg acgtcgaagg
     1021 tggtgcggga ctcgagccgc tgggcctcga gcagcttccc cgcctggcgc agcaccgcca
     1081 gccgctcggc cagctcggcc cggatcagct tcaccgcccg ctcgatggtg ggccgctggg
     1141 tgacgaagtg cttggcagga tagacggcgc agcgctccag ctgggcgatg gcccgcccgg
     1201 tcagcggatc gatcttggtg atgcgctcga ccgtgtcgcc ccagaattcg acccggatgg
     1261 cctgctcggc gtaggcgggg tagatctcga ccgtatcacc acggacccgg aag
//
LOCUS       DATIFF010000255         3713 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1112509, whole genome shotgun sequence.
ACCESSION   DATIFF010000255 DATIFF010000000
VERSION     DATIFF010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3713
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1112509"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..251
                     /locus_tag="VLD58_03725"
     CDS             <1..251
                     /locus_tag="VLD58_03725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="undecaprenyl diphosphate synthase family
                     protein"
                     /protein_id="HSB53434.1"
                     /translation="LDPAEIDENAISRRLFTAEFPDPDLLIRTSGELRLSNFLLWQLA
                     YAELYVTPVLWPDFTRQDLWDAVLEYQRRDRRFGKVSV"
     gene            278..1135
                     /locus_tag="VLD58_03730"
     CDS             278..1135
                     /locus_tag="VLD58_03730"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: protein motif:HMM:NF013327.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004605 - phosphatidate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0016024 - CDP-diacylglycerol biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HSB53435.1"
                     /translation="MASNLTKRIAFAVVAIPAALGVVYWGGWPLVLVVVAAGVLGARE
                     LLAFGDRLGFAPLTRTALLSAAVLPVLVYLALTSVPALVGAGWLLVGLWLVALLTVAL
                     ARRAPTERPLASTAITAFAVLYPAGLASFLLSIRHLRFPEQSWAGAWLVFFPLVVTWV
                     CDTAAMFAGKAIGGKKLWPAISPGKTWSGSIAGVIFAILTVPVLNLAVLDRLGIALPL
                     GQGVLFGLVLGIIGQVGDLAESLYKREVGVKDSSNLIPGHGGVLDRFDSLYFVLPVSA
                     ALYRLFGIQ"
     gene            1135..2229
                     /gene="dxr"
                     /locus_tag="VLD58_03735"
     CDS             1135..2229
                     /gene="dxr"
                     /locus_tag="VLD58_03735"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HSB53436.1"
                     /translation="MQGVAILGSTGSIGKSALAVLARQRERFRPIALTAFNNSEALAR
                     QTAAWNPKLSALVSERGAEVLVEAATHPDVDIVLNAVVGAAGLDATLAALRAGKRVAL
                     ANKETLVMAGDLVRAASEAGGGELVPVDSEHSAVLQCISGRESGAARLILTASGGPFR
                     CWDADRIAAATVAEALNHPTWRMGNKVTVDSATLANKALELIEAHHLFGLPYEALEVV
                     VHPQSIVHAFVGFCDGSVIGQMGFPTMELPILYALTHPDRLPDDGVRRFDPVAIGTLT
                     FEPVRDDVFRAFRAGVDAGKTGGTAPAVFNAANEVAVAAFLAGRIPFGNIAQTIERVL
                     EAHRPEPVRDLETVRAADRWARERASEVLQ"
     gene            2226..3593
                     /gene="rseP"
                     /locus_tag="VLD58_03740"
     CDS             2226..3593
                     /gene="rseP"
                     /locus_tag="VLD58_03740"
                     /inference="COORDINATES: protein motif:HMM:TIGR00054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HSB53437.1"
                     /translation="MNFLFTVGVLIIVLGVLIFVHELGHFLAAKWAGIRVHRFALGMG
                     NPIPGLSFRRGDTEYAICWLPLGGYVKMATAEEEATSSALEGGQVTEPVPPDEMFEAK
                     PVWKRTVVILAGVTMNVLFAYAVYTWLAAKNGEQLEPTTTVGIVIDSLPPGAEALRGL
                     KAGDRIVMIGGDSVHSWNDVESGIAGLSGDSIGITLADGRVISLHIHQAALAERIRAS
                     QAVQPFRLPILGTILAGHPAERAGLKVMDTVLSINDEPIVQWYDLVTRVRASAGKPLT
                     FKVARGGTPVEVTVMPEIESETIAKGVTERVGKIGAGPWVDVTTRPYAFGEALRAGAG
                     ATLTASTQIVRTVQGLLSARISSREVGGPILIGQMAAQSARLGLDTFMSFMALVSVNL
                     AVLNLLPIPVLDGGQFFFLMAEAVLRRPLSLRLRERLTLVGLFLIVCLMVLAFSNDIR
                     RLLGV"
BASE COUNT          509 a         1229 c         1307 g          668 t
ORIGIN      
        1 ggctcgatcc cgccgagatc gatgagaacg cgatatcgcg gcgcctcttc accgcggagt
       61 ttcccgatcc tgatctcctg atccggacct cgggcgaact ccggctctcc aatttcctgc
      121 tgtggcagct cgcctacgcc gagctctatg tcacgcccgt gctctggccc gacttcaccc
      181 gccaggatct gtgggatgcg gtgctcgagt accagcggcg ggaccggcgc ttcggaaagg
      241 tgtcggtctg aggccgaagg ctgacggctg acaactcatg gcctccaatc tcaccaagcg
      301 gatcgcgttt gcggtcgtcg ccattcccgc cgcgctgggg gtggtgtatt ggggtggctg
      361 gcccctggtc ctggtcgtgg tcgcggccgg cgtcctcggc gcccgcgagc tgcttgcctt
      421 cggtgaccgc ctgggctttg cgcccctgac gcgcaccgcc ctcctttcgg cggcagtcct
      481 tccggtcctc gtctatctcg cgctgaccag cgttcccgcg ctggtcgggg cggggtggct
      541 gctggtgggg ctgtggctgg tggcgctctt gacggtggcc ctggcccgcc gggccccgac
      601 cgagcggccg ctcgcgagca ccgccatcac cgcgttcgcg gtcctctatc ccgccgggct
      661 cgccagcttc ctgctctcga ttcgccatct ccgattcccg gagcagtcct gggccggggc
      721 ctggctggtc ttcttcccgc tggtggtcac ctgggtctgc gataccgccg cgatgttcgc
      781 cggcaaggcg atcggcggaa agaagctgtg gccggcgatc agccccggca aaacctggtc
      841 aggcagcatc gcgggggtca tcttcgcgat tctcactgtg ccggtgctca acctggcggt
      901 gctggaccgc ctcggcatcg ccttgccgct cgggcagggt gtgctcttcg ggctggtgct
      961 tggtatcatc ggacaggtgg gtgacctggc ggaatccttg tacaagcgcg aagtcggcgt
     1021 gaaggattcc tcgaacctga ttccgggcca cggcggcgtg ctcgatcggt tcgactcgct
     1081 ctacttcgtg ctgccggtgt cggccgcgct ctatcgtctc ttcgggattc agtgatgcag
     1141 ggcgttgcca tcctcggctc caccgggtcg atcggaaaga gcgcgctcgc ggtgctggcc
     1201 cgccagcggg agcggtttcg cccgatcgca ctgaccgcct tcaacaattc cgaggcgctg
     1261 gcccggcaga ccgcggcctg gaacccgaag ctgagcgcgc tcgtctcgga acggggtgcc
     1321 gaggtcctgg tcgaggcggc cacccatccg gacgtcgata tcgtcctcaa cgccgtggtc
     1381 ggggcggcgg ggctcgatgc gaccctggcg gcgctgcggg ccggcaagcg ggtggcgctg
     1441 gccaacaagg aaacgctcgt catggcgggc gacctggtcc gggcggccag cgaggcgggt
     1501 ggcggcgagc tggtgccggt agattccgag cacagcgcgg tgctccagtg catctccggt
     1561 cgggaaagcg gggccgcgcg cctgattctg acggcgtcgg gtggcccctt ccgctgctgg
     1621 gatgccgacc ggatcgcggc ggctacggtg gcggaggcgc tcaatcaccc cacctggcgc
     1681 atgggcaaca aggtgacggt cgacagcgcc accctggcca acaaggcgct ggagttgatc
     1741 gaggcccatc acctcttcgg cctgccgtac gaagcgctgg aagtggtggt gcatccgcag
     1801 agcatcgtgc acgcgttcgt cggcttctgc gatggaagcg tgatcggcca gatgggcttc
     1861 cccacgatgg agctgcccat cctgtatgcg ctgacccatc cggaccggct ccccgatgac
     1921 ggggtacggc gcttcgatcc ggtggccatc gggaccctga ctttcgagcc ggtgcgagac
     1981 gacgtcttcc gcgccttccg ggccggggtc gatgcgggga agacgggcgg aacggcgccc
     2041 gcggtgttca atgccgccaa cgaggttgcg gtggcggcgt tccttgcagg gcggataccg
     2101 ttcgggaata tcgcccagac catcgagcgg gtgctcgagg ctcaccggcc ggagccggtg
     2161 cgagatctgg aaactgtccg ggccgcggat cgctgggccc gtgagcgtgc cagtgaggtg
     2221 ttgcagtgaa cttcctgttt accgtcggcg tgctgatcat cgtcctgggc gtgctgatct
     2281 tcgtgcacga gctggggcat ttcctcgccg ccaagtgggc cggcatccgg gtccaccgct
     2341 ttgcgctcgg catgggcaat ccgatcccgg gattgtcgtt ccgacggggc gataccgaat
     2401 acgccatctg ctggctgccg ctgggcggct acgtgaagat ggcgacggcc gaagaagagg
     2461 ccaccagcag cgcgctcgag ggcggccagg tgaccgagcc ggtgccgccc gacgagatgt
     2521 tcgaggccaa gccggtctgg aagcggaccg tcgtcatact ggccggcgtg acgatgaacg
     2581 tgctgttcgc ctacgccgtg tacacctggc tggcggccaa gaacggggaa cagctcgagc
     2641 ccaccaccac ggtcgggatc gtgattgact ccctgccgcc cggcgccgag gcgctgcgag
     2701 gactcaaggc cggcgaccgg atcgtcatga tcggcggcga ctcggtgcat tcctggaacg
     2761 acgtcgagtc gggcatcgct ggcctctccg gcgacagcat cggcatcacg ctggccgacg
     2821 gccgggtgat ctccctccac attcatcagg ctgcgctggc ggagcggatc cgcgcctcgc
     2881 aggcggtcca gccgttccgc ctcccgatcc tcgggaccat tctcgccggg catcccgctg
     2941 aacgtgccgg gctcaaggtg atggacacgg tgctgtccat caacgacgag ccgattgtcc
     3001 agtggtacga tctggtcacc cgggtgcgcg cttccgctgg aaagccactc accttcaagg
     3061 tggcccgggg cgggacgccg gtcgaagtga ccgtgatgcc ggagatcgag tccgagacca
     3121 tcgcgaaggg cgtgaccgaa agggtgggga agatcggggc cggcccgtgg gtcgacgtga
     3181 ccactcgccc ctacgcgttc ggggaggcac tgcgcgccgg tgcgggcgcg acgctcaccg
     3241 cctcgaccca gatcgtgcgg acggtgcagg gcctcctgag cgcccggatt tcgagccggg
     3301 aagtcggcgg cccgatcctg atcggccaga tggcggcgca gagcgcccgc ctcggcctcg
     3361 acacgttcat gtcgttcatg gcgctggtct cggtgaacct ggcggtgctc aacctcctgc
     3421 cgattccggt gctcgatggc gggcagttct tcttcctgat ggcggaggcg gtgctgcggc
     3481 ggcccctttc cctgcgcctg cgggagcggc tgaccctggt cgggctcttt ctgatcgtct
     3541 gcctgatggt gctggccttc tccaacgata tccggcgcct gctcggggtg tagccatcct
     3601 cccggcgaca agctggcacg cgggctgcac agcgcccgcg gcacagccgg gagggatggc
     3661 gacacgggcg gctcaccccc cggaagggac aggtctggac tgacatcctg tcc
//
LOCUS       DATIFF010000256         2122 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_189524, whole genome shotgun sequence.
ACCESSION   DATIFF010000256 DATIFF010000000
VERSION     DATIFF010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2122
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189524"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2122)
                     /locus_tag="VLD58_03745"
     CDS             complement(<1..>2122)
                     /locus_tag="VLD58_03745"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB53438.1"
                     /translation="EALAVFKPWQPTLTGLDQPERLEGQQVSWEFLQVLDVSPALGRG
                     FTAEDDRAGAARVIVLSDRLWRVRFGADPTILGRQIALADQHYTVIGVMPRNFSSVVA
                     PGSDVWSPLRYDMTQDRSWGHHLRMVGRLRPGITAEAAALELDGIARQQVPEFARRPW
                     ASLQGGLLLVLLQQDLTRGVRPALLAVLAAVGLLLLIASVNGTSLVLARGIRRRGEFA
                     VRSALGAGRARLVRQLVIEHLVLALTGGVVGGLDAAFGVRALVALRPPGLPRVDAIQV
                     DAGLFLLALAIALVVGLVFGLVAAVQATGEWTVGTLQLASRRLAGSHRRVRSALVVTQ
                     VALALVLLIGSGLLLRSMRRLLAVDPGFAPEHLLTLQVQLSGSRYGSDSTAWRFFEDA
                     IEAVRRVPGVTAASLTSQLPLSGDVDLYGVRLDPPVSDDPGEGHGTFRYAVSPDFFGT
                     MGIPLLRGRLLNPGDRAGAAPVAIVSAALARRRFGERDPIGQRNTIGSGASYTVVGIV
                     GDVRQVSLALDDASAVYTTPSQWRFADNTVSVVIRSEANTATLVPAVRQAIWSVDRDQ
                     AVVRVATMDALIARTAAERRFTLLLFGCFAIAALLLAAAGVYGVVAGSVAERTREFGV
                     RAALGATPERIVGMVLGQGVALTGAGIAIGLAGALGASRFLRTMLFSVSPLDPATYAG
                     VLAMLGCMAVLASLLPAWRAVRASP"
BASE COUNT          377 a          795 c          688 g          262 t
ORIGIN      
        1 gggctggccc gcaccgcccg ccaggccggg aggagcgacg ccagcaccgc catgcatcct
       61 agcatcgcca gcacgccggc ataggtggcg gggtcgagtg gcgacaccga gaagagcatc
      121 gtcctgagga accggctcgc gcccagcgcg ccggccagtc caatggctat gccagcgccg
      181 gtcagcgcta caccctggcc cagcaccatc cccacgattc gctcgggggt ggcgcccagc
      241 gcggctcgga ctccgaactc tctggtgcgt tccgccacgc tccccgccac cacgccatag
      301 acaccggccg ccgcgagcag caacgcggcg atcgcaaagc acccgaagag gagcagtgtg
      361 aatcgccgtt cggccgccgt ccgggcgatc agggcgtcca tagtcgccac tcggaccacg
      421 gcctggtccc ggtccaccga ccagatcgcc tggcgaacag ccggcacgag cgtcgctgta
      481 ttcgcttcgc tccggatcac caccgacacg gtgttgtcgg cgaagcgcca ctgcgagggc
      541 gtggtgtaga ccgcactggc atcgtccagc gcgagggata cctgcctgac gtcgcccacg
      601 attccgacga ccgtgtagct cgcgcccgag ccgatcgtgt tccgctgtcc gatggggtcg
      661 cgttccccga agcggcgccg cgccagcgca gcactgacta tcgcgaccgg agccgccccg
      721 gcgcggtctc ccgggttcag caaccggccc cgcagcagcg gaatccccat cgtcccgaaa
      781 aagtccgggc tcactgcgta gcggaacgtg ccgtgcccct ctcccgggtc atcggagacg
      841 ggagggtcga ggcgcacgcc gtacaggtcc acatcaccac tcaagggaag ctggctggtc
      901 agactggccg cggtcacacc cggcacccgg cgaaccgctt cgatagcatc ctcgaagaag
      961 cgccaggcgg tactgtcgct tccatagcgc gagccggaca gctgaacctg tagcgtcagg
     1021 agatgctccg gcgcgaaccc cggatcgacc gcgagcagcc gccgcatact gcggagcagc
     1081 agtcccgagc caatcaacag gaccagcgcg agcgcgacct gtgtcaccac cagcgccgag
     1141 cggacgcggc gatggctgcc ggccagccgg cgcgatgcca gttgcagggt accgactgtc
     1201 cattctcccg tcgcctggac ggcggccacc agcccgaaga ccaggcccac gaccagggcg
     1261 atcgccagcg caagcaggaa cagcccggcg tcgacctgga tcgcatccac tcgcggcagc
     1321 cccggcggcc tcagcgccac cagcgcccgc acgccaaagg ccgcgtcgag tccgccaacc
     1381 actcctccgg tcagggcaag caccaggtgc tcgatgacga gctgccgcac caaccgcgcc
     1441 cggcccgcgc cgagggccga gcgcaccgcg aactcgcctc gccgccggat tccgcgggcg
     1501 aggaccaggc tggttccgtt gaccgaggcg atgaggagca gcaatcccac cgccgccagc
     1561 accgcgagca gcgcgggacg caccccacga gtgagatcct gctgcaggag aaccagcagc
     1621 aggccaccct gaagtgaggc ccagggccgg cgcgcgaact cgggcacctg ttgccgcgcg
     1681 attccgtcca gctccaacgc cgcggcctcg gctgttatgc cggggcgaag gcgtcccacc
     1741 atccggagat gatgtcccca cgaccggtcc tgggtcatgt cgtaccgcag gggcgaccac
     1801 acatcggagc caggagccac cacgctgctg aagttccgcg gcatcacacc gatgacggtg
     1861 taatgctggt cggccagtgc gatctggcgg cccaggatgg tggggtcagc gccgaacctg
     1921 acgcgccaga ggcggtcgct cagcacgatc accctcgcag ccccggcacg atcgtcttcg
     1981 gccgtgaacc cccggccgag cgcgggcgac acatccagca cctggagaaa ctcccagctg
     2041 acctgctggc cctcgagccg ctccggctgg tcgaggccgg tcagggtcgg ctgccacggt
     2101 ttgaataccg cgagagcctc ga
//
LOCUS       DATIFF010000257         7057 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_803986, whole genome shotgun sequence.
ACCESSION   DATIFF010000257 DATIFF010000000
VERSION     DATIFF010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7057
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_803986"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(140..322)
                     /locus_tag="VLD58_03750"
     CDS             complement(140..322)
                     /locus_tag="VLD58_03750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53439.1"
                     /translation="MTARRWSETSHPRADPFFQAVRCRLAAERAPDTLRIRIGMMLAL
                     EQLAGGAGEPGHEGPR"
     gene            458..1252
                     /locus_tag="VLD58_03755"
     CDS             458..1252
                     /locus_tag="VLD58_03755"
                     /inference="COORDINATES: protein motif:HMM:NF024986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HSB53440.1"
                     /translation="MIQIRRRDSGALLHSVDATTLAGARLAHAVLLYAALPDADLSGA
                     DLRGTDLCSADLSGARLDGADLRGADLSGSNLTGASLVNARLTDARILGANLTGAKLT
                     GADLTRTSFKLAHAGAPGADFRNARLRRAGLDHTSFPGCDFSGADLSEANLESANLSE
                     SNLTGVALVGARLDKTSLRQANLEHADLSQALLYRADLNGCRLGDATFGHTVVATCPT
                     LAGAIGLAATSHLAPSSLDVGTWTQLGAMLPAEFLDGIGVALRAFS"
     gene            complement(1515..1769)
                     /locus_tag="VLD58_03760"
     CDS             complement(1515..1769)
                     /locus_tag="VLD58_03760"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HSB53441.1"
                     /translation="MHPPDRFTCEEVFARLDDYLDRELTAEEMRLVREHLATCAACAS
                     EYRFEAGVLEGVREKLRRLAVPADLMARITARIAAEGRDP"
     gene            complement(1771..2403)
                     /locus_tag="VLD58_03765"
     CDS             complement(1771..2403)
                     /locus_tag="VLD58_03765"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSB53442.1"
                     /translation="MSSPSHQAATAVDSSDPKVTFEALLETVLDGAFGTALRYTRNRT
                     DAEDLVQEAALLAWRGFKNFDRGSNFKGWFFRILTNCFFSKYRKRKRQGTEIELDDAP
                     ELYLYCQTAALGLHASTEDPAQQLMGQMATEQVEAAIAALPDEYRVVATLYFLQDFSY
                     QEIAEVVGVPVGTIRSRLHRGRRLLQKALWVIAEERGIVNALTGGTDDGE"
     gene            2717..2929
                     /locus_tag="VLD58_03770"
     CDS             2717..2929
                     /locus_tag="VLD58_03770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53443.1"
                     /translation="MSEPVAHWVLTVAGAYALVGVLFAIPFAWRGAGVLEPVAREGTL
                     GFRLLILPGAATLWPLLLYRWWKAAR"
     gene            2926..3387
                     /locus_tag="VLD58_03775"
     CDS             2926..3387
                     /locus_tag="VLD58_03775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53444.1"
                     /translation="MNRALRQRHLLTVTVLAPVAAATLVTAVAARRHAPPNQVPSLLV
                     GAPSPTGKELSRTIIRGDGLTLEVRRLSTDRGSTLELRPLARTIAADVLVYLGHSGSA
                     GLTAASLLGSLAGPEPVRFALPGDSAVGSVLLFYSPAVGRLLARDSVSLAR"
     gene            3384..4424
                     /locus_tag="VLD58_03780"
     CDS             3384..4424
                     /locus_tag="VLD58_03780"
                     /inference="COORDINATES: protein motif:HMM:NF013918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSB53445.1"
                     /translation="MSSHFQAVNWNRQKYVYDGVALGSAALFLLVFAVASIVHSPEVT
                     AETILIRGLGLAGIVLLHVILCIGPLCRLDPRFLPLLYNRRHLGVLMCTLALGHATFA
                     IVQFHALGDAPALVSLLTGTGKASDLGRFPFELLGLGALLILWTMAVTSHDFWLALLS
                     AATWKALHLTVYLAYVLLLGHVALGALQDDQTGGLTALLAAGAALVFGLHIAAGLRER
                     PRDRLTSDAGEWVDVGSVDDCVEGKARTAIVGSERVAVVRHAGGISCVSNVCRHQGGP
                     LGEGRIVDGCLTCPWHGYQYLPESGSSPPPFTEKIPTYRVRIVSGRVQVHRSANPPGT
                     HVPAAPVPGRPA"
     gene            4421..5167
                     /locus_tag="VLD58_03785"
     CDS             4421..5167
                     /locus_tag="VLD58_03785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53446.1"
                     /translation="MTETEFYVGYFPKAGAALARFLRRRILFLVIALAVLAAALALLA
                     PRLGRGMFEYGLMRDFDGRVIESPYPVLAVARPGSARPAWSYYVLVGPGKHGAGRSVV
                     GLDGRSVHLSGTLIHRDGSTAIEVAGRPTARSGADQPLDPIEDLGDMVLTGEIVDSKC
                     HLGVMTPGEGPTHRGCAVQCIRGGAPPLLVARDSAGRDWRFLLTDASGAAVGSRILEL
                     VAVPVRVKGHASRLGELLYLAVEPSTIERL"
     gene            5167..5970
                     /locus_tag="VLD58_03790"
     CDS             5167..5970
                     /locus_tag="VLD58_03790"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acyltransferase"
                     /protein_id="HSB53447.1"
                     /translation="MTVERRASRALVYPVAPASLPDTAVDAGRYRLRFAQTSEDLDRI
                     LRLRFTVFNLELGEGLDLAYVTQKDEDDFDARFHHLMIESRDSGEVVGTYRMQTAAMA
                     RDQGGFYSADEFDLSGIPADVLSRSVELGRACVAREHRNGRVLNLLWRGLAGYLMWNR
                     LTCLFGCCSLTSQEPRLGRAVMARLVREGLVDPRIRVAPLPHTTCEGEDDGGPAPDPH
                     IPALFQSYLNLGAKVWGPPAIDRMFKTIDFIVGLDVTTVDPGVLRTFFR"
     gene            5967..6782
                     /locus_tag="VLD58_03795"
     CDS             5967..6782
                     /locus_tag="VLD58_03795"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HSB53448.1"
                     /translation="MTALPGANVIPSEATARVSSTRRASPVGYLRLILVPLWTALGIV
                     VLGVARIGPGGVRRKRRIVRGWARGLLRLLRIEVLAEGAPPTPPFLLVSNHLSYLDII
                     VLASQTDAVFVAKREVRSWPVFGLGASAIGCIFVDRESRSDTVRVGDAMRDRHRAQEG
                     VVLFAEGTSSEGSTVLPLRSSLLEWPAAEQLPVHTATLSYHTAPSDPPASESLCWWGD
                     MTFLPHLIGVCRLGPSQARVAFGRATISASDRKALATLLHSALLADFRPSGAR"
     gene            6791..>7057
                     /locus_tag="VLD58_03800"
     CDS             6791..>7057
                     /locus_tag="VLD58_03800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53449.1"
                     /translation="MSWLRHDQGFAVLFNRDERRTRSAGLPPEEQMSAGVRFLAPVDP
                     DGGGSWASVNVHRVALCILNQYDKERGPVAGQVSRGQLLLGLAHA"
BASE COUNT         1000 a         2504 c         2326 g         1227 t
ORIGIN      
        1 ggcgctccga gagataggga ccccaggcgc gccagggtga atgcatgccg ccctggtcga
       61 gccgggctcg ctccgcggta agtcgccgca cactgcctcc acgttgttcc ggacattgcc
      121 agcatcggtg gtccggacat caacgcggcc cttcatggcc cggttccccc gcgccaccgg
      181 ccagctgttc cagcgccagc atcatgccga tccggatgcg cagggtgtcg ggagcacgct
      241 cggccgccag gcggcagcgc acggcctgga agaacggatc tgccctcggg tgagaggtct
      301 cggaccagcg ccgcgccgtc atgtccactg atccacgtca aactcccact gcagtaaggg
      361 tgactgccga tggagcgtaa cgccgcaacc tccggcgtag ttcccggagc tcgcctccgc
      421 ccgtatactt tccctaccct gcccgggagg ccgcaccatg atccagattc gccggcgaga
      481 cagcggcgcg ctgctccatt cggtcgacgc caccaccctc gcgggtgccc ggctggccca
      541 cgcggtgctg ctctacgccg cccttccgga cgccgacctc tccggggccg acctccgggg
      601 cacggacctc tgctccgccg acctctcggg tgcgcgcctc gatggggccg atctccgggg
      661 ggcagacctc agcggctcga acctgacagg cgcgagcctc gtgaatgccc ggctcaccga
      721 tgcgcgaatc ctgggggcga atctgaccgg cgcgaagctc actggcgccg acctcacccg
      781 caccagcttc aagctggccc acgcgggcgc gcccggagcc gacttccgga atgcgcggct
      841 ccggcgggcc ggcctcgacc acaccagctt ccccggctgc gacttctccg gggcggacct
      901 ctccgaagcc aatctcgagt cggccaatct ctcggagagc aacctgacgg gtgtggcgct
      961 ggtgggagcg cggctcgaca agaccagcct ccgccaggcg aacctcgagc acgcggacct
     1021 gtcgcaggcc ctgctctacc gcgccgacct caatggctgc cgtttgggcg atgcgacctt
     1081 cggccatacg gttgtggcga cctgtcccac gctggcgggc gcgatcggcc tggcggcgac
     1141 gtcacacctg gcgccctcgt cactggatgt ggggacctgg actcaactgg gggcgatgct
     1201 gccggcggag ttcctggatg ggattggtgt ggcgctgcgg gcattctcgt gagggagggc
     1261 tgggcaattc accgcagagg cgcagagacg cggagggccg cagagaggtc cgagtgaaac
     1321 cgtgcgtcct caccggcgcc gggttgttcc agtagttggt tgttgttctt cttggtgttc
     1381 ttcttgttgt tgttcttgtt gttgatttca ttcagagacg tgcaacagtc cagcactatc
     1441 gaccaatcct ccgcggccct ctgcgcctcc gcgcctctgc ggtgaaccgc cggtggccgg
     1501 ggaatcacca aacgctaggg atcccggccc tccgccgcga tccgcgccgt gatccgcgcc
     1561 atcagatccg ccggcaccgc gaggcggcgg agcttctccc gcaccccctc gagtaccccg
     1621 gcctcgaagc ggtactcact ggcgcaggcc gcgcaggtcg cgagatgctc acgcaccagc
     1681 cgcatctcct cggcagtgag ctcgcggtcg agatagtcgt ccagccgagc gaagacctct
     1741 tcgcaggtga accggtcggg gggatgcatc ttattctcca tcgtccgtgc ctccggtgag
     1801 cgcgttgacg atcccgcgtt cctcggcgat cacccacaaa gccttctgta acagccgccg
     1861 gccgcggtgc agccgggagc ggatcgttcc caccggcacg ccgaccacct cggcgatctc
     1921 ctggtaggaa aaatcctgca ggaagtagag cgtcgcgacc acccggtact cgtcggggag
     1981 cgcggcgatg gcggcttcca cctgctcggt ggccatctgc cccatcagct gctgggccgg
     2041 gtcctcggtg gatgcgtgca ggccgagcgc cgccgtctgg cagtagaggt agagctcggg
     2101 ggcgtcgtcc agctcgatct cggtgccctg gcgcttccgt ttgcggtact tgctgaagaa
     2161 gcagttggtc aggatccgga agaaccaccc cttgaagttg ctcccccggt cgaagttctt
     2221 gaacccgcgc caggccagca gggcagcctc ctggaccaga tcttcggcat cggtacggtt
     2281 gcgggtgtac cgcagggccg tgccaaaggc cccatcgagc accgtttcca gcagcgcctc
     2341 gaaggtgacc ttaggatcgg aactgtcgac ggccgttgcg gcctggtgag acggggagct
     2401 caagatcggg atcatccttt ggtcaacaac gcagcccccg gcattttggt tcccaaggcg
     2461 cccggaggca aggtcccggc ttacagatga agcccgcaac ggctgagccc tcaactgcat
     2521 acacagattg gaaggataca aacggattcc agttccccgg cttcagccgg cacctcatcg
     2581 acggggaccc gcatcgtgta tccgtttcca tctgagtcca tctgtggtaa gctgttgaaa
     2641 ggaaccccgg gctgaggccg ggcgttagac tcctcgacca gccgttcggt gtcggaccca
     2701 accggagtca atccaaatga gtgaacccgt cgcccactgg gtgctgacgg tcgccggggc
     2761 atacgcgctg gtgggtgtgc tctttgccat cccgttcgcc tggcgcgggg ctggtgtgct
     2821 cgagccggtg gcccgtgaag ggactctggg cttccggctc ctgatcctgc cgggcgccgc
     2881 caccctctgg cctctcctcc tctaccgctg gtggaaggcg gcccggtgaa tcgtgccctt
     2941 cggcagcggc accttctcac ggtgaccgtg ctggcaccgg ttgccgcggc cacgctggtg
     3001 acggctgtgg cggcgcggcg ccacgccccg cccaaccagg tcccgtccct gctcgtaggc
     3061 gccccatcgc ccacggggaa agaactgagc cgcacgatca tccggggcga cggcctcacc
     3121 ctcgaggtcc gccggctctc caccgatcgg ggcagcaccc tcgagctccg cccgctggcg
     3181 agaaccatcg cggccgacgt cctcgtctac ctcggccaca gcggttcggc cggcctgacc
     3241 gcggccagcc tcctcggttc gcttgcggga ccggagccgg tgcgcttcgc cctgcccggc
     3301 gacagcgccg tcggcagcgt actcctgttc tacagccccg cggtgggccg cctcctggcg
     3361 cgggacagtg tgagcctcgc ccgatgagct cacactttca ggcggtcaac tggaatcgcc
     3421 agaagtatgt ctacgacggg gtggcgctcg gcagcgcggc gctgttcctg ctcgtcttcg
     3481 cggtcgcgag catcgtccat agtcccgagg taacggcgga gacgatcctg atccggggac
     3541 tcggtctcgc ggggatcgta ctgctccacg tcattctctg catcggcccg ctctgccgcc
     3601 tcgatccccg gttcctgcca ctgctgtaca accggcgcca tctcggcgtc ctgatgtgca
     3661 ccctggcgct cgggcatgcg accttcgcca tcgtgcagtt ccatgcgctg ggcgacgccc
     3721 ccgcactggt gagtctcctc accggcaccg gcaaggcgag cgatctcggc cgtttcccct
     3781 tcgagctgct cgggctcggc gccctcctca ttctctggac catggccgtc accagtcatg
     3841 acttctggct ggcgctcctc tcggccgcga cctggaaggc gctccacctc acggtgtacc
     3901 tggcctacgt gctgctgctc ggtcacgtgg ccctcggtgc gctgcaggat gatcagacgg
     3961 ggggcctgac cgcgctcctc gcagcgggcg ccgcgctggt cttcggactc cacatcgcgg
     4021 ccggactgcg ggagcgcccc cgcgaccggc tcacctccga tgcaggcgag tgggtggatg
     4081 tcgggtcagt cgatgattgc gtcgaaggca aggcacggac cgcgatcgtc ggctcggagc
     4141 gggtcgccgt ggtgcggcac gcgggcggga tcagctgcgt ctccaacgtc tgccgccacc
     4201 agggcgggcc gctcggcgaa ggccgcatcg tcgacggctg cctcacctgt ccctggcacg
     4261 gctaccagta cctgccggag agtggctcgt cgccgccgcc cttcaccgag aaaatcccga
     4321 cctaccgggt gcggatcgtg agcggccgag tgcaggtgca tcggagcgcc aacccgcccg
     4381 gcacccacgt cccggcggca ccggtgcccg ggaggccggc atgaccgaga ccgagttcta
     4441 cgtcggctac ttcccgaagg ccggcgcggc actggcgcga tttctccggc ggcgtatcct
     4501 ctttcttgtc atcgcgcttg ccgtgcttgc cgcggcgctg gccctgctgg cgcccaggct
     4561 tggccgggga atgttcgagt acggattgat gcgcgacttt gacggccgcg tgatcgaatc
     4621 cccctatcct gtgctcgcgg tggcccggcc cggatccgcc cgccccgcct ggtcgtacta
     4681 tgtactggta ggtccgggga aacacggcgc cggccgatcc gtcgtggggt tggacggtcg
     4741 ctcggtgcat ctctccggta cgctcattca tcgtgacggc agcaccgcga tcgaggtggc
     4801 cggtcggccc acggcgcgat ccggggcgga tcagccgctc gacccgatcg aggacctggg
     4861 cgacatggtc ctcaccggtg agatcgtcga cagcaagtgt catctcgggg tcatgacgcc
     4921 gggtgagggt cccacccacc gtggctgcgc ggtccagtgc atccgcggcg gcgccccgcc
     4981 tctcctggtg gcgcgcgatt cggcggggcg cgactggcgc tttctcctca ccgacgcctc
     5041 cggcgcggcc gtggggagca ggatcctgga actggtggcc gtgccggtgc gggtgaaggg
     5101 ccacgcatcg cggctgggtg aactgctgta ccttgcggtc gaaccttcca ccatcgagcg
     5161 gctctgatga ccgttgagcg ccgggcgtcc cgcgccctcg tctatccggt tgcccccgcc
     5221 tcgctccccg acacggctgt cgatgccggc cgttatcgcc tccgcttcgc gcagaccagc
     5281 gaggacctcg accgcatcct ccggctccgg ttcacggtct tcaacctgga gctgggcgaa
     5341 ggcctcgatc tcgcctacgt cacccagaag gacgaggacg acttcgacgc ccgcttccat
     5401 cacctgatga tcgagtcccg cgacagcggc gaggtggtgg ggacctaccg gatgcagacc
     5461 gccgcgatgg cgcgggacca gggcggattc tactcggccg atgaattcga cctgagcggg
     5521 attccggccg acgtgctctc acgctcggtg gagctgggcc gcgcctgcgt tgcgcgcgag
     5581 catcgcaacg gccgcgtgct caatctcctg tggcgcggcc tcgcgggata cctgatgtgg
     5641 aaccggctca cctgcctctt cggctgctgc tccctcacca gccaggagcc acggctcggc
     5701 cgggcggtga tggccaggct ggtgcgcgag ggcttggtcg atccgcgaat ccgggtcgct
     5761 ccgctgccgc acaccacctg cgagggtgag gacgacggcg gccccgcacc cgatccccac
     5821 atccccgccc tgttccagag ctacctcaac ctgggcgcca aggtctgggg ccccccggcg
     5881 atcgaccgga tgttcaagac catcgatttc atcgtgggcc tcgatgtcac cacggtcgac
     5941 cccggcgtgc tgaggacttt cttccggtga cggcgctgcc gggggcgaat gtcatcccga
     6001 gcgaagcgac ggctcgggta tcgtccaccc ggcgggcctc gccggttggc tacctccgcc
     6061 tgatcctggt tccgctctgg accgcactgg ggatcgtggt actgggtgtc gcccgcatcg
     6121 gtcccggcgg ggtacgccgt aagcgccgga tcgttcgagg ctgggctcgg ggtctgttgc
     6181 gcctgcttcg catcgaggtg ctggccgaag gggctccgcc aacaccacca ttcctgctgg
     6241 tcagtaatca tctctcctac ctcgacatca ttgtcctcgc cagccagacc gacgccgtct
     6301 tcgtggccaa gcgggaagtg cggagctggc cggtcttcgg cctcggcgcg agcgccatcg
     6361 gctgcatctt cgtggatcgg gaatcccgga gtgacaccgt gcgggtcggc gatgccatgc
     6421 gggaccggca tcgcgcgcaa gagggcgtgg tgctcttcgc ggagggaacc agcagtgagg
     6481 gctccacggt gctgccgctc agatcatcgc tcctcgagtg gcccgcggcc gagcaattgc
     6541 cggttcacac cgcgacactc agctatcaca ccgcacccag cgatcccccg gccagcgagt
     6601 ccctctgctg gtggggtgac atgaccttcc tgccgcacct catcggggtg tgccggctgg
     6661 gcccgagtca ggcgcgcgtg gccttcggac gggccacgat ctccgccagc gaccggaagg
     6721 cgctcgccac ccttctgcac tccgccctgc tcgccgattt ccgccccagc ggcgcccgct
     6781 gatgtgcacc ttgagctggc tccgtcacga ccagggcttc gccgtcctct tcaatcgtga
     6841 cgagcgtcgc acccggagcg ccgggctgcc gccggaagag cagatgagtg ccggggtgcg
     6901 cttcctcgcc ccggtcgatc cggacggcgg cggcagctgg gcctcggtga acgtccaccg
     6961 ggtggcgctc tgcatcctca accagtacga caaggaacgc ggaccggtcg ccgggcaggt
     7021 gagccggggc cagctgctgc tcggtctggc ccatgcc
//
LOCUS       DATIFF010000258         1094 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_35598, whole genome shotgun sequence.
ACCESSION   DATIFF010000258 DATIFF010000000
VERSION     DATIFF010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35598"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1006
                     /locus_tag="VLD58_03805"
     CDS             <1..1006
                     /locus_tag="VLD58_03805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSB53450.1"
                     /translation="IGAGPTGLFGAFYAGMRGATCRIIDALPALGGQLMALYPEKFIF
                     DVAGFPRVRARDLVKGMAEQATQFGTEVRLDETVIGLRRVDDATGGIGHFVLETDRGS
                     YPTRTLLIAAGIGAFEARKLPAEGVEIWEGRGLDYKVLDPTRFKGQRVLIVGGGDSAF
                     DWVVNLDGIASGITLIHRRDGFRAHAATIRQVERMKAEGRCDVRTFTEVKRIEGGDRI
                     ERVTLLQNKTGAEETLPFDAVVPQLGFHSDLGAIKEWGLDTQKADIRVDRVMRTNVPG
                     IYAAGDIAAYEGKLKLIATGVAEACTAVNNAVHYIDPKRKVDPGHSSDLKIFEDRQEA
                     "
BASE COUNT          175 a          375 c          389 g          155 t
ORIGIN      
        1 catcggcgcc ggccccacgg ggctcttcgg cgccttctac gccggaatgc gcggcgcgac
       61 ctgtcgcatc atcgacgccc tgccggcgct gggcggccag ctcatggcgc tgtatcccga
      121 gaagttcatc ttcgacgtgg cggggttccc ccgcgtgcgg gcccgggatc tcgtcaaggg
      181 aatggccgaa caggccacgc agttcggcac cgaggtccgg ctggacgaga ccgtcatcgg
      241 gctccgccgc gtcgatgatg cgaccggcgg catcgggcat ttcgtgctcg agaccgaccg
      301 gggcagctat ccgacgcgga cgctgctcat cgcggcgggg atcggggcgt tcgaggcgcg
      361 aaagctccct gccgaggggg tcgagatctg ggagggccgc gggctcgact acaaggtcct
      421 ggacccgacg cgcttcaagg ggcagcgggt gctcatcgtg ggtgggggcg attcggcttt
      481 cgactgggtg gtcaatctcg atggcatcgc gtcgggcatc accctgatcc accggcggga
      541 cggcttccgg gcgcacgccg cgaccatccg gcaggtcgag cggatgaagg cggaggggcg
      601 ctgcgacgtg cggaccttca ccgaggtcaa gcgcatcgag ggcggggacc ggatcgagcg
      661 ggtgaccctc ctccagaaca agaccggagc ggaggagacc ctgccgttcg acgccgtcgt
      721 cccccagctg gggttccact ccgacctcgg cgcgatcaag gaatgggggc tcgacaccca
      781 gaaggcggac atcagggtgg accgggtgat gcgcaccaat gtcccgggca tctacgccgc
      841 cggcgatatc gccgcctacg agggcaagct caagctcatc gccaccggcg tcgccgaggc
      901 ctgcacggcg gtcaacaacg ccgtccacta catcgacccg aagcgcaagg tcgaccccgg
      961 ccacagctcg gacctcaaga tcttcgagga ccggcaggag gcctagcggc tccgggaccc
     1021 gctccggccc gccccatcgg ggcgggccgg ctcatttccg gccgatctgc accaccaggc
     1081 tgtcgatccg ggcc
//
LOCUS       DATIFF010000259         4120 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1727311, whole genome shotgun sequence.
ACCESSION   DATIFF010000259 DATIFF010000000
VERSION     DATIFF010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4120
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1727311"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            79..2148
                     /gene="recG"
                     /locus_tag="VLD58_03810"
     CDS             79..2148
                     /gene="recG"
                     /locus_tag="VLD58_03810"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF008168.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HSB53451.1"
                     /translation="MAALRPDTPVKFLKGIGERRAESFARLGIRTAQDLLWHIPFRYL
                     DASSVTPFARARVGEEVACVGKVIAKRLMPTRSGLRIFTAVLRDQSGMLECAWPGQGF
                     LDRTIQEGQTLLVAGPVKFYHGRQLNPREFIILADADQEGEAAPAGRVLPVYRATEGL
                     SHKLIRALIDRHLDQMIAFSRDPLPEVIPADLRLKPLPEALRVVHRPATIEEAEAGRQ
                     RLAFDELLDLQLMLARARLLAKRPRAGVRFTLQHTFTRQLADALPWPLTADQKRAIRE
                     ITADMTAAERMHRLLMGDVGTGKTVVALFAMLLALENDHQAALMAPTELLAEQHFATL
                     TKLLEPLEIRPELLVGRLTTAEKASRRKKLASGRARLVVGTHALLEDTVAFQRLGLVV
                     IDEQHRFGVDQRAQLIRKGDATDVLLLSATPIPRSLALTRFGDLDVSTLKAKPPGRGS
                     IRTGVRTEAQRSRALEFVRDQCLAGRQAYVVLPVIDESEKIDLRAASTMAERLQAMWP
                     DLSVGLVHGRLKSDERDERMRKFRAGEIQVLVATTVIEVGIDVANATVMLVEHPERFG
                     LAQLHQLRGRIGRGAEESFCILMTEEPVPPRLKAFAATNDGFKIAELDLAERNMGDLI
                     GERQAGSFELRLARLPDDQELLTLTRKVASDILAEDPMLVRPRHQALKERALSRYPRA
                     VELFRTG"
     gene            complement(2318..2815)
                     /locus_tag="VLD58_03815"
     CDS             complement(2318..2815)
                     /locus_tag="VLD58_03815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53452.1"
                     /translation="MNAHPGLRTIAALALAAFLAVVPLAAQQATDSLVRRPSPALVKY
                     GKWAVVAAAIGMGLKASSAHHDADRAFNRLNNYCFSQPAGCPQSPGGKYLDPVAERYY
                     QQSLAGDRRARSWLLGGEGALLGAAGLFVWELTRPKTLPRNIPFNPELRWSPGETQLR
                     GSVRF"
     gene            complement(2812..3867)
                     /locus_tag="VLD58_03820"
     CDS             complement(2812..3867)
                     /locus_tag="VLD58_03820"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSB53453.1"
                     /translation="MTVNAACGGYRPVPEFDPGELKQPHPIDGTPLTRLWRTRPVRGP
                     SAPVAFDSVNAYIGGSDRRLAAVDLASGKTRWTVRLTGPLVGGVLEQGDVVYAATDQP
                     GGKVVALRKESGRQVWSAGTGYVQAPLALTDGRLAVLTRTGFIEAINISTGKIAWKKR
                     LPSTRVAPTVADSGVVMVTSYDSLFLVRLRDGQVLLRRRSPGTVTSSWIRLGPLLVAG
                     TGDSTVIAVAPDSLREAWRVRLDAPLLVSPAAQGDTIFCVTRAGSIYRILPGADPVEA
                     RIHSPGWPATGTPALIGPWLLIGGADGAMYGFDRQSGEQSWKMALGRPAELPAYVLYD
                     GSFLAVGGAGDLHRITR"
     gene            3928..>4120
                     /locus_tag="VLD58_03825"
     CDS             3928..>4120
                     /locus_tag="VLD58_03825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016291490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HSB53454.1"
                     /translation="MTSARIESLSAHTGLSVTVRGWVSHTRSSGKIAFVVLRDGTGLL
                     QGVLSKKELPAEVWERFPSL"
BASE COUNT          651 a         1441 c         1396 g          632 t
ORIGIN      
        1 gcgagtcggt ggatgacctg gagccgttca acccctcggc ctttgcggcg cggctcctcg
       61 agtagcagcg cctgagccat ggcggccctc aggcccgaca ctcccgtcaa gttcctcaag
      121 ggcatcggcg agcggcgggc cgagtccttt gcccggctcg gtatccgcac ggcgcaggac
      181 cttctctggc acatcccctt ccgttatctc gacgcctcgt cggtcacccc gttcgcccgg
      241 gcgcgggtgg gcgaggaagt cgcctgcgtc ggcaaggtca tcgccaagcg gctcatgccg
      301 acccggagcg gactccgcat cttcaccgcg gtcctccggg accagagcgg catgctggaa
      361 tgcgcctggc cggggcaggg gtttctcgac cgcaccatcc aggagggtca gacgctcctg
      421 gtcgcggggc cggtcaagtt ctaccatggc cgtcagctca atccgcggga gttcatcatc
      481 ctggccgacg ccgatcagga gggtgaagcg gcgccggccg gacgggtgct cccggtgtac
      541 cgtgccaccg agggtctctc ccacaagctg atccgcgcac tgatcgaccg gcacctcgac
      601 cagatgattg ccttctcgcg cgatccgctt cccgaggtga tccccgccga cctgcgcctc
      661 aagccgctgc cggaggcgct acgcgtggtg caccgccccg cgacgatcga ggaagcggag
      721 gcgggccggc agcgcctggc ctttgacgaa ctgctcgatc tccagctgat gctcgcccgc
      781 gctcggctgc tggccaagcg cccccgcgcc ggggtccgct ttacgctcca gcatacgttt
      841 acccgccagc tggccgacgc actgccctgg ccgctcaccg ccgaccagaa gcgggccatc
      901 cgcgagatca ccgccgacat gaccgcggcc gagcggatgc atcggctgct catgggcgac
      961 gtggggacgg gcaagaccgt ggtggcgctc ttcgcaatgc tgctggcgct cgagaacgat
     1021 caccaggccg ccctcatggc tccgacggag ctgctggcgg agcagcactt tgccacgctg
     1081 acgaagctgc tggagccgct cgagatccgc cccgagctcc tggtgggccg cctcaccacc
     1141 gccgagaagg caagccgccg gaagaagctg gcctccgggc gcgctcggct ggtcgttggc
     1201 acccatgcgc tcctcgagga taccgtcgcg ttccagcggc tcggtctcgt cgtgatcgat
     1261 gagcagcatc gtttcggggt ggaccagcgg gcccagctga tccggaaggg cgacgccacc
     1321 gacgtattgc tgctgtccgc caccccgatc ccgcgttcgc tggcactgac ccgcttcggc
     1381 gacctcgacg tttccactct caaggccaag cctccgggcc ggggcagcat ccggaccggc
     1441 gtgcgcaccg aggcgcagcg gagccgggcg ctcgagttcg tgcgggacca gtgcctggcg
     1501 gggcggcagg cctacgtggt actcccggtc atcgatgagt cggagaagat cgacctgcgg
     1561 gcggcgtcga ccatggccga gcggctccag gccatgtggc ccgacctgtc ggtggggctg
     1621 gtgcacgggc ggctcaagag cgacgagcgg gacgagcgga tgcggaagtt ccgcgccggc
     1681 gagatccagg tgctggtggc gactacggtc atcgaagtgg gcatcgacgt cgccaacgcg
     1741 accgtgatgc tggtcgaaca cccggagcgc ttcgggctgg cccagctgca ccagcttcgt
     1801 ggccgcatcg ggcgcggcgc ggaggagagc ttctgcatcc tgatgacgga ggagccggtg
     1861 ccgccccgcc tcaaggcttt tgccgcgacg aacgacggat tcaagatcgc ggagctcgac
     1921 ctggcggagc ggaacatggg cgacctgatc ggggagcggc aggcaggaag cttcgagttg
     1981 cggctggccc gtctcccgga tgatcaggaa ctgctcaccc tgacaaggaa ggtggcatcg
     2041 gacatcctgg cggaggatcc gatgctggtg cggccgcggc accaggcgct caaggagcgg
     2101 gcgctgtcgc ggtatcccag ggcagtagag ctgttccgga cgggatgaga ggcggtttgg
     2161 ggcttgaggc ttggggtttg gggcaggaaa cgaagtaggc caggtggcgg atcggttgat
     2221 ggccccagat cgctcgcgcg cgaccgtcac caacctcacc accctctggc ccacaacttc
     2281 aaaccgcttg gccctcagcc cgaagcccca agcctcctca gaaccgaacc gaacctcgaa
     2341 gctgtgtctc ccccggagac cagcgcagtt ccggattgaa cgggatattc ctcggcaacg
     2401 tcttgggccg ggtcagctcc cacacgaaca gccccgccgc gccaagcaat gctccttcac
     2461 caccgaggag ccagctgcgg gctcgacggt cccccgccag cgactgctgg tagtaccgct
     2521 ccgccacggg gtccaggtat ttcccgccgg gtgactgcgg acagccagcc ggctgcgaga
     2581 agcaatagtt gttcaggcgg ttgaaggccc ggtcggcgtc gtgatgcgcg ctcgacgcct
     2641 tgagtcccat cccgatcgcg gctgccacca ccgcccactt gccgtatttc accagcgccg
     2701 gagaggggcg ccggaccagc gaatcggtgg cctgctgggc cgcaagcggt accacggcca
     2761 gaaaggctgc gagcgccagc gccgcgatgg tacggagacc cgggtgggcg ttcatctcgt
     2821 gatccggtgc aggtctcccg cgccacccac cgccagaaag ctcccgtcgt agagcacgta
     2881 ggccggcagc tccgccggtc gccccagcgc catcttccag ctctgttccc cactctgccg
     2941 gtcgaagcca tacatggcgc cgtccgcgcc gccgatcagg agccagggac ctatgagcgc
     3001 tggggtgcca gtcgcgggcc aaccgggcga atggatccgg gcttcgaccg gatcggcccc
     3061 gggcaggatg cggtagatcg agcctgcccg ggtgacacag aagatcgtgt cgccctgtgc
     3121 ggcgggggag acgagtagag gggcatccag tcgcacgcgc cacgcctcgc ggaggctgtc
     3181 aggcgccacc gcaatcaccg tcgagtcacc ggtccccgcc accagcagcg ggccgagcct
     3241 gatccaggac gaagtgacag tgccgggcga ccgccgccgg agcaggacct gaccgtccct
     3301 caacctcacc aggaagaggc tgtcgtacga cgtgaccatc accacgccac tgtcggccac
     3361 ggtgggggcc actcgggtgg aggggagccg tttcttccag gcgatcttgc cggtcgagat
     3421 gttgatcgcc tcgatgaatc cggtgcgggt cagtaccgca agtcgcccgt cggtgagcgc
     3481 cagcggcgcc tggacatagc cggtgcccgc gctccagacc tggcgcccgc tctccttccg
     3541 gagtgcgacc actttgcccc ccggctggtc cgtggcggcg tagaccacgt cgccctgttc
     3601 cagtacgccc cccaccaggg gcccggtgag ccgtaccgtc cagcgggtct tgccgctggc
     3661 gaggtccacc gcagccagtc tccggtcgct cccgccgata taggcgttga ccgagtcaaa
     3721 ggcgaccggg gcactcggcc cgcgcaccgg ccgggtacgc cagagccgcg tgagcggagt
     3781 gccatcgatg gggtggggct gcttgagttc gcccggatcg aactccggca ccgggcggta
     3841 gccgccacag gctgcgttga cggtcatcac cacgacggct agactccacg ccctccggcg
     3901 gccaggccgg ctcacgcaga ccttaccatg accagcgctc gcatcgaatc cctctcggcc
     3961 cacaccgggc tttccgtgac cgtccgcggc tgggtgagtc acacccgctc cagcggcaag
     4021 atcgcctttg tcgtgctgcg ggacggcacc ggtctcctcc agggcgtgct gagcaagaag
     4081 gagctccccg ccgaggtgtg ggagcgtttc ccgtcgctca
//
LOCUS       DATIFF010000260         3731 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_958589, whole genome shotgun sequence.
ACCESSION   DATIFF010000260 DATIFF010000000
VERSION     DATIFF010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3731
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_958589"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..769
                     /locus_tag="VLD58_03830"
     CDS             <1..769
                     /locus_tag="VLD58_03830"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB53455.1"
                     /translation="IINLSVNARDAMPTGGSLVIETANLPFPGTEHGPESIMPAGDYV
                     LLTVSDSGTGMDDETMRHVFEPFFTTKAPGKGTGLGLATVYGIVKQSGGFIYADSEPG
                     QGSRFRIYLPRVEGVADSSDAPAHNGASAAKAEGTILLVEDEEAVRRLARRVLENLGY
                     RVLEAAGGPAALTLMETFPGTLDLMVTDVIMPGMSGQELSARLRTRLPDLKILYVSGY
                     TDDAILQHGKLLPNTSFLHKPFSPGSLAERVREVLGR"
     gene            1543..2193
                     /locus_tag="VLD58_03835"
     CDS             1543..2193
                     /locus_tag="VLD58_03835"
                     /inference="COORDINATES: protein motif:HMM:NF025605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HSB53456.1"
                     /translation="MSHHESTASGSPAARVATPPDGTTERILAAAAQVYAEAGFRGTT
                     TRRVAQEAGVNEITLFRQFGTKEALVKAALARSYEEPLPVELSQPVDPPEELYAWAIT
                     TYRHWFEGRHLISRVLGDLAEHPELAPDVCDEPGCKHAMVSAYLGRMRDQGLATADFI
                     PDAAAGMLMGAIFSHAIWREHFATPDLPSPEEIMRHYVALVLAAVGYRPAGAKERA"
     gene            2190..3683
                     /locus_tag="VLD58_03840"
     CDS             2190..3683
                     /locus_tag="VLD58_03840"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSB53457.1"
                     /translation="MRQLLLAVAGTLTLAVTAPLAAQRPVLDTLPQAATLSLDDALRL
                     ALPASEAVALAQSAVKRAQGDVRKARSEFFPQINGTASYTRTLKSQFSRAGGSGGSDS
                     TATTSCNRFQGDPSAPITTRLDSLESSLNCITGLNPFAAFGSLPFGQRNQYRLGLDGS
                     QILYAGGRVRAQTRAARAAERSAKIGLSAQEAQLTLDVTQAYYDAALADKLLRIAQGT
                     LQLADSTYDQTRLARRVGAQPEFDVLRAQVSRDNQRTVVIQRESDREIAFLRLKQLLN
                     LPLSQPLTLTTPVEDSVLPVVPALDSLVHREVDTATDSRAPVRQAEASAEEQEQRYRV
                     AKAERYPSVTLSSSFARLGYPSDVLPSWSDFVTDWTVGLTVKVPLFTGGRIGGNVQSA
                     SATANDARIRLQQTRERTAVDTRSALERLRAASAAWEASQGTVAQAEKAYAIAEIRFR
                     EGISTQTELADSRILLEQARANRATAGRDLQTARVRVALLPELPLAN"
BASE COUNT          610 a         1313 c         1253 g          555 t
ORIGIN      
        1 catcatcaat ctctcggtga acgcccgcga cgcgatgccc accggaggct ccctggtgat
       61 cgagaccgcg aacctcccgt tccccggcac ggagcatgga ccggagagca tcatgccggc
      121 cggggactac gtgctgctca cggtgagcga cagcggcacc ggcatggacg acgaaaccat
      181 gcggcacgtc ttcgaaccgt tcttcaccac caaggcgccc ggcaagggca ccggactcgg
      241 cctcgcgacg gtgtacggca tcgtcaagca gagcggcggg ttcatctacg ccgacagcga
      301 gcccggccag gggagccggt tccggatcta cctgccacgg gtggagggtg tggccgacag
      361 cagcgacgcc ccggcgcaca acggcgcgtc ggccgcaaag gccgaaggta cgattctcct
      421 ggtggaagac gaggaagcgg tgcggcggct ggcccggcgg gtgctggaga acctgggcta
      481 ccgggtgctg gaggcggcgg gcggcccggc ggcgctgacg ctgatggaga ccttccccgg
      541 caccctggac ctgatggtga ccgacgtgat catgccgggg atgagcggcc aggagttgtc
      601 agcccggctc cggaccagac tccccgatct caagatcctg tacgtgtcgg gctacaccga
      661 cgatgccatt ctccagcatg gcaagctgct gcccaatacc tccttcctgc acaaaccctt
      721 ctcgccgggc tcgctggcgg aacgggtacg ggaggtgctg gggcgctgat cctcgcaccc
      781 gcacggaggt ccgcaccacc ccgggcgcgt cactcgagtc cgactcctca tccagtccga
      841 agtaccagct cacctgctcc agcagctcgt cgtcggtcga cacacccgtg aggatcgtct
      901 ccgggtagcc tggctccacc aggacatagc cgaacggata gtcgaggccc gagagccgga
      961 tgatccggcg gggcccgttc tccagctcga ccacgatcga gtcggcggtg gtggtttcca
     1021 gcttgatccc ctgctcatcg agcagcggtg acaccgcgcc ggtataggcc cggaaatcgt
     1081 cgagcagatc ggccccttcg ccctgcttga gcgtgtccga cgccggcagc cagaacgcca
     1141 ccaccgtcgg ctcgcgcacg atgggcgctt cctccagcgc gcgatcggcc gtgaccgaat
     1201 cacgccgctc cgtccgggcg ggacccgggc ggcaggcgac ggcagccagc gtgagcagca
     1261 ggagcttgcg gggcactccc cctcgcgggt tggtgtaggc ccgaagagta acggcgaaga
     1321 tggctcgggg atgcctgtac gattggcggc gggcgggtca cgcgccaagt gcgacagtca
     1381 ctgcggagtc ttcaggccgc caaagtagac tcattttcgt acaatcttgt accatgtaag
     1441 tgcatgcttg catgaaggcg cctgccttgt tactgtagct cccgctccga gtccctcgat
     1501 cgtgataact cgggactctc tctggaccga tacggcggaa tcatgagcca ccacgaatca
     1561 acagcctccg gcagcccggc agcccgggtc gccactccac ccgacggcac caccgagcgg
     1621 atcctcgccg ccgcggcgca ggtctacgcc gaggcaggat tccgcggcac caccacccgc
     1681 cgggtggccc aggaagcggg ggtcaatgag atcaccctct tccgccagtt cggcaccaag
     1741 gaagcgctgg tgaaggccgc gctcgcgcgg agctacgagg agccgcttcc ggtcgagctc
     1801 agccagccgg tcgatccgcc ggaggagctc tacgcctggg ccatcaccac ctatcgccat
     1861 tggttcgagg gacgccacct gatctcccgg gtcctgggcg atctcgcgga gcatccggag
     1921 ctcgcgcccg atgtgtgcga cgagcccggc tgcaagcacg ccatggtctc ggcatacctc
     1981 gggcgcatgc gggatcaggg tctggcgacc gccgacttca ttcccgatgc cgcggccggg
     2041 atgctcatgg gcgccatctt ctcccacgcc atctggcggg agcacttcgc cacccccgac
     2101 ctgccctcgc cggaagagat catgcggcac tacgtcgcac tggtgctcgc tgcggtcgga
     2161 taccgccccg ccggggcgaa ggagcgggca tgaggcagct cctcctggcc gtggccggca
     2221 cgctgacgct ggccgtcacc gcgccactcg ccgcccagcg cccggtgctg gacacgctgc
     2281 cccaggcggc cacgctctcg ctcgacgacg cgctccgcct ggcactccct gccagtgaag
     2341 cggtggcgct ggcgcagtca gccgtgaagc gggcccaggg cgatgtgcgg aaggcgcgaa
     2401 gcgagttctt cccccagatc aacggcaccg cctcctatac ccgcacgctc aagagccagt
     2461 tcagccgcgc gggcggaagt ggtggcagcg attcgaccgc gaccaccagc tgcaatcgct
     2521 ttcagggcga cccgagcgcg ccgatcacca ctcggctcga ctcgctggag agctccctca
     2581 actgcatcac cggcctcaat cccttcgcgg ccttcgggag cctgccgttc ggccagcgga
     2641 accagtaccg gctcgggctc gacggcagtc agatcctcta tgccggcggc cgggtgcggg
     2701 cccagacccg cgcggcgcgg gcggcagagc gttcggcgaa gatcgggttg tcggcccagg
     2761 aggcgcagct cacgctcgac gtcacccagg cctactacga cgcggcgctg gccgacaagc
     2821 tcctccgcat tgcgcagggc acgctccagc tggccgactc gacctacgac cagactcgcc
     2881 tcgcgcgccg ggtgggagcc cagccggagt tcgacgtact gcgggcccag gtgtcccgtg
     2941 acaaccagcg caccgtggtg attcagcggg agtccgaccg cgagatcgcg ttcctccgcc
     3001 tcaagcagct cctcaacctg cccctgtcgc agccgctcac tcttaccacc ccggtggaag
     3061 acagcgtgct gccggtggtg ccggcgctcg attcgctggt ccatcgtgag gtcgacaccg
     3121 ccaccgactc ccgggctccg gtgcgccagg ccgaggcctc ggccgaggag caggagcagc
     3181 gctaccgggt ggcgaaggcc gagcggtatc cctcggtcac cctctcctcg agcttcgccc
     3241 ggctcggcta cccgagcgat gtgctgccgt cgtggagcga cttcgtcacg gactggacgg
     3301 tcgggctcac ggtgaaggtg ccgctcttca ccggcgggcg gatcggagga aatgtgcagt
     3361 cggcgtcggc cacggcgaac gacgcccgca tccggctgca gcagactcgc gagcggaccg
     3421 cggtcgacac ccgctccgcc ctcgagcggt tgagggccgc atccgccgca tgggaagcaa
     3481 gccagggcac cgtcgcgcag gcggagaagg cctacgcgat cgcggagatt cgcttccgcg
     3541 agggcatcag cacccagacc gagctggccg actcgcggat cctgctggag caggcccgtg
     3601 ccaaccgggc gacggcaggt cgtgatctcc agacggcccg ggtacgggtg gcgttgttgc
     3661 cggagttgcc gttggcgaac tgaaggccgg aggccggagg ctggagtgga ttgtcgtagg
     3721 gtcgggggtc a
//
LOCUS       DATIFF010000261         1075 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_35907, whole genome shotgun sequence.
ACCESSION   DATIFF010000261 DATIFF010000000
VERSION     DATIFF010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1075
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35907"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(90..569)
                     /locus_tag="VLD58_03845"
     CDS             complement(90..569)
                     /locus_tag="VLD58_03845"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HSB53458.1"
                     /translation="MTDLRTDLSDAAQSGDTDRLKALLDRNRSFASMPDEQGYTPLHY
                     AAYFGHQDAATYLLSIGAELTAVSLDPLRSQPLHAAASSGNRQIAGLLLDAGADPNAE
                     QTGQWTPLHSAAAGGHTEIVRLLLAQGADPTRRSASGATPKDLAAERGHHACVEALS"
     gene            complement(609..>1075)
                     /locus_tag="VLD58_03850"
     CDS             complement(609..>1075)
                     /locus_tag="VLD58_03850"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF013845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA dimethylallyltransferase"
                     /protein_id="HSB53459.1"
                     /translation="TGKPLSYWQAAARSQGVIDPWYVVLTAPRPVLHQRILVRAEEMV
                     RRGMIEEVAAVLAEGVPANASGLDAIGPREAVEYLHGKRTRESVAEAVAIASRQYAKR
                     QETWFRHQLEGDVLTLDATRPPEEVAAVIAEAWDKAGSRVTRHGSRGEEPGS"
BASE COUNT          146 a          358 c          387 g          184 t
ORIGIN      
        1 cgagccgccg tatgtgggat agcaggtgat gccgatgcgc atgggctact ggccgttggc
       61 cgttggccgt tggccattgg cggtggatct catgacaggg cctcgacgca ggcgtggtga
      121 ccgcgttcgg ccgcgaggtc cttcggggtg gcgccggagg cactcctacg ggttggatcg
      181 gcgccttgtg ccagcagcag acgcacgatc tccgtgtgcc ccccggctgc ggccgagtga
      241 agcggggtcc actgcccggt ctgttcggca ttgggatcgg ccccggcgtc gagcaggagt
      301 cccgcgatct ggcgattccc gctcgacgcg gcggcgtgca gtggctggct ccgcagcggg
      361 tccagcgaga cggccgtcag ctcggcgccg atcgaaagca ggtaagtggc ggcgtcctgg
      421 tggccgaagt aggcggcgta atggagcggg gtgtagccct gctcgtcggg catggaggca
      481 aaggagcggt tccggtcgag caacgccttg agccggtcgg tgtcgccgct ctgggcggca
      541 tcggagagat cggtgcggag gtcggtcatg ggcgggaagc tagagggtca agggtcaagg
      601 gtcgagggtc agctgcctgg ctcttcgccc ctagacccgt gacgcgtgac ccgtgacccc
      661 gccttgtccc aagcctccgc aatgaccgcc gccacttcct ccggcggccg ggtcgcgtcc
      721 agcgtcagga cgtcgccctc gagctgatgc cggaaccagg tctcctgccg cttggcatat
      781 tgccggctcg caatggccac tgcctctgcc acgctctcgc gggttcgttt gccatggaga
      841 tactccaccg cctcgcgtgg acctatggcg tcgaggcccg aggcattcgc gggcacccct
      901 tcggccagca ccgccgccac ctcctcgatc atgccgcgcc gcaccatctc ctccgcccgt
      961 accaggatcc gctggtgcag cactggccgg ggcgcggtga gcaccacgta ccagggatcg
     1021 atgacgccct ggctccgggc cgcggcctgc cagtagctga gcggcttccc ggtga
//
LOCUS       DATIFF010000262         1336 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_497167, whole genome shotgun sequence.
ACCESSION   DATIFF010000262 DATIFF010000000
VERSION     DATIFF010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1336
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_497167"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..667
                     /gene="nth"
                     /locus_tag="VLD58_03855"
     CDS             <1..667
                     /gene="nth"
                     /locus_tag="VLD58_03855"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0140078 - class I DNA-(apurinic or
                     apyrimidinic site) endonuclease activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HSB53460.1"
                     /translation="ETAWQRPRRRRVVAIRDRLREMYGRPVNRPHGHPIAELVRTVLS
                     QNTNDRNRDRAFAGLRERFSTWEEVRDAPTEEVEEAIRPGGLSKQKAPRIQEILGQLG
                     DHPDLDWTATAPREESLEFLTGLPGVGRKTAACVLIFTWGIPEIPVDVHVYRVGGRLG
                     LFRPGASFAEAHDEMLAITDPADAYEFHMNLIRHGREVCRPTPRCGECELRRMCPWYR
                     QHA"
     gene            729..1145
                     /locus_tag="VLD58_03860"
     CDS             729..1145
                     /locus_tag="VLD58_03860"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSB53461.1"
                     /translation="MSKRPFVIFGIFVAVLAVVIPLWAFDSSGNPDKGSRSVPSDLNK
                     GKTLFVTNCGTCHTLYAAGTDGNFGPNLDVTLAPAGPPSGPTAKQTITATKGRVTNAI
                     QNGVDSTTPGRMPGGIISGQQAEQVADFVANVAGQG"
BASE COUNT          225 a          491 c          443 g          177 t
ORIGIN      
        1 cgagacggcc tggcagcgcc cccgccggcg ccgcgtggtg gcgatccgcg accggctgcg
       61 ggagatgtac gggcggccgg tgaaccggcc ccacgggcac ccgatcgcag agctggttcg
      121 gaccgtgctc tcccagaaca ccaacgatcg caaccgcgac cgcgccttcg ccgggctgcg
      181 cgagcgcttc tccacctggg aggaggtccg cgacgccccc accgaggagg tcgaggaggc
      241 gatccgcccc gggggcctct cgaagcagaa ggcaccgcga atccaggaga tcctcggcca
      301 gctcggagac caccccgacc tcgactggac cgccaccgcg ccccgggagg agtcgctgga
      361 gttcctcacc gggctgccgg gggtggggcg caagaccgcc gcctgcgtgc tgatcttcac
      421 ctgggggatc cccgagatcc cggtggatgt ccacgtctac cgggtcggcg gcaggctggg
      481 actgttccgg cccggcgcgt cgttcgccga ggcgcacgac gagatgctgg cgatcaccga
      541 tcctgccgac gcctacgagt tccacatgaa cctgattcgc cacgggcgcg aggtctgccg
      601 gccgaccccg cgctgcgggg aatgcgagct gcggcgcatg tgcccctggt accgccagca
      661 cgcctgaccg cttccgccca caggtagtat ccccgccgcc ggagggcgga ctcgccggcg
      721 cgaagaagat gagcaagcgg ccattcgtga tcttcgggat tttcgtcgcc gtcctcgcgg
      781 tggtgatccc gctgtgggcc ttcgactcca gcggcaaccc cgacaagggc tcgcgcagcg
      841 tcccctccga tctcaacaag ggcaagaccc tgttcgtgac caactgcggg acctgccaca
      901 ccctctacgc ggcgggcacc gacggcaact tcggccccaa cctcgacgtc accctcgccc
      961 ccgctggccc gcccagcggg ccgaccgcga agcagacgat caccgcgacc aagggccggg
     1021 tcaccaacgc gatccagaac ggagtcgaca gcaccacccc ggggcggatg cccggcggca
     1081 tcatcagcgg ccagcaggcc gagcaggtgg cggacttcgt cgccaacgtc gccggccagg
     1141 gctgacccgg ctccggcgag agttcgataa gacaccctat tggtgttcga gggaacaccc
     1201 gcgtgttcga gtgaacacct cgtgagcggg gcgcaagcga acgctggatt gcgatctcac
     1261 acacggccgc gaccgcaact tctcggcccc cggaccgttc ttgatcgcga ccgaagacga
     1321 gaggagcctc acttga
//
LOCUS       DATIFF010000263         2801 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2189540, whole genome shotgun sequence.
ACCESSION   DATIFF010000263 DATIFF010000000
VERSION     DATIFF010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2801
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2189540"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            161..1159
                     /locus_tag="VLD58_03865"
     CDS             161..1159
                     /locus_tag="VLD58_03865"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HSB53462.1"
                     /translation="MSVVAVMGAGSWGTTLADLLSRRGHDVRLWAYETDVVAAINGRQ
                     ENPVFLPGCALAPDLRATGDAVGAVRGADVVLMVAPSHVFRGVVRQARPGIGAGALVV
                     SATKGIEPESLKLMSAVLEEELPSHPVTALSGPSFALEVFQGQPTAVVAASHNEAAAQ
                     QVQAVFATPRFRVYSHTDVIGVELAGSLKNVIAIAAGILEGLGLGNNPRAALITRGLA
                     EMTRLGVAMGADPLTFAGLAGMGDLILTTTGALSRNRSLGVALAQGQSLADYTAAHRT
                     VAEGVNTAKAALALALRVGTELPICAQVAAILFDGKPPKQAVGDLMERTLKSEQWR"
     gene            1162..1542
                     /locus_tag="VLD58_03870"
     CDS             1162..1542
                     /locus_tag="VLD58_03870"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HSB53463.1"
                     /translation="MARPVQEFFSIGEVCALTDLKPHVLRYWESQFRFLNPAKNRSGN
                     RVYKSREVELIMLVKHLLYTEKYTIEGARQRIEHYRRTGELRGSARIAMERETLRELR
                     EAIEDVVLILDGKVPPPRPEPPTE"
     gene            1583..2338
                     /gene="surE"
                     /locus_tag="VLD58_03875"
     CDS             1583..2338
                     /gene="surE"
                     /locus_tag="VLD58_03875"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HSB53464.1"
                     /translation="MNILVSNDDGILAPGLALLADVCQSVGQVTVIAPDREQSGTSHS
                     LTMHRPLRPARRPDGSFQVDGTPTDCVLLAMGALMPERPDFVFSGVNHGPNMGEDVLY
                     SGTVAAAMEGVSLGVPSVAISFAGPASDLAALNSYREILARLVQRIVKVQDFPPETLL
                     NINLPPGGAPAVRGIKVTALGSRYFSESLTRMKDPWGREIFWIGGGEIHWTGGAESDH
                     QAVSEGYISITPLHMDLTNYRLIETVRSWSIEA"
     gene            2320..>2801
                     /locus_tag="VLD58_03880"
     CDS             2320..>2801
                     /locus_tag="VLD58_03880"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HSB53465.1"
                     /translation="MVHRGLNENDGYGGYRSQLVAELQAKGIRDLAVLRAIARVPRHL
                     FVPESVRHRAYEDSALPIGGGQTISQPWVQARSLELARLTGRERVLEVGTGSGYQTAL
                     LAELADQVFSVERIPALAQTARAALEAAGVRHVTVLVGDGSLGWRPYAPYDAIIVAAA
                     S"
BASE COUNT          429 a          945 c          971 g          456 t
ORIGIN      
        1 tgctgcatcc cgcccgccgc tcgccggtaa tgctggtgat tgacatcgcc ctggccgggt
       61 tcctgatctg gaagcaccgg gccaacatcc agcggctcct ggcaggcacc gaaaaccgct
      121 tcggcagccg cgggcgcaag ccgacgcagg ggccggccgc gtgagcgtgg tcgcggtgat
      181 gggcgcgggg agctggggga ccacactggc cgatctcctc tcccggcgcg ggcacgatgt
      241 ccggctctgg gcctacgaga ccgacgtcgt cgccgcgatc aacgggcgcc aggaaaaccc
      301 ggtgtttctt cccgggtgcg cactggctcc ggatctccgg gcgaccggcg atgcggtcgg
      361 tgcggtgcgg ggcgccgatg tggtattgat ggtggcgccg agtcatgtct ttcgcggggt
      421 ggtgcgccag gcgcggcctg gcattggagc gggcgcgctg gtggtgagcg ccaccaaggg
      481 catcgagccc gagtcactca agctgatgtc ggcggtgctg gaagaggagc tgcctagcca
      541 cccggtgacg gcgctttcgg gccccagctt tgcgctggaa gtctttcagg ggcagcccac
      601 cgcggtggtg gccgcctcgc acaatgaagc ggcggcccag caggtccagg cggtgttcgc
      661 gacgccccgg ttccgggtct actcccacac cgacgtcatc ggcgtggagc tggcggggtc
      721 gctcaagaac gtcatcgcga tcgctgccgg gattctcgaa gggctgggac tgggcaataa
      781 cccgcgggcg gcgctgatta cccggggcct cgcggaaatg acccggctgg gggtggcgat
      841 gggggccgat cccctgacgt tcgccgggct tgcggggatg ggcgacctga tcctgacgac
      901 caccggcgcg ttgagccgca accgctcgct cggcgtggcg ctggctcagg gtcagagcct
      961 ggccgactac accgcggccc atcgcaccgt ggccgaaggg gtgaacaccg ccaaggccgc
     1021 gctggccctg gccctgcggg tcgggaccga gctgccgatc tgcgcccagg tggccgcgat
     1081 actctttgac ggcaagccgc cgaagcaggc ggtgggggat ctgatggagc gcacgctcaa
     1141 gtcggaacag tggcggtgac catggcgcga ccggtccagg agttcttctc catcggagaa
     1201 gtctgcgctc tcaccgacct caagccgcac gtactgcggt attgggagag ccagttccgc
     1261 tttctcaacc cggccaagaa ccgctctggc aaccgggtgt acaagagccg cgaggtcgag
     1321 ctcatcatgc tcgtcaagca tctcctgtac accgagaagt acaccatcga gggcgcccgc
     1381 cagcggatcg agcactaccg ccgcaccggt gagctccgcg ggtcggcccg tatcgccatg
     1441 gagcgcgaaa ccctccgcga gcttcgcgag gcgatcgagg acgtggtgct gattctcgat
     1501 ggcaaggtcc cacccccccg gcccgagcct ccgacggagt agtccgcccg agcctcctcc
     1561 ggctgtatct ttcgccccac tcatgaacat cctcgtttcc aacgacgacg ggattctggc
     1621 tcccggcctg gccctgctgg cggacgtatg ccagtccgtg ggccaggtga cggtgattgc
     1681 ccccgatcgc gagcagagcg ggacctccca cagcctgacc atgcaccggc cgctccggcc
     1741 cgcccggcga ccggatggga gcttccaggt cgacggcacg ccgaccgact gcgtgctcct
     1801 cgccatgggc gcgctcatgc ccgaacgccc ggacttcgtc ttctccggcg tgaaccacgg
     1861 gcccaacatg ggcgaggatg tgctctactc gggcaccgtt gccgctgcca tggagggggt
     1921 cagtctgggg gtgccgagcg tggcgatctc ctttgccgga ccggcgagcg atctcgcggc
     1981 gctcaacagc tatcgggaga tcctcgcccg cctggttcag cggatcgtga aggtgcagga
     2041 cttccccccc gagacactgc tcaacatcaa cctcccgccg ggcggcgccc cggcggtaag
     2101 ggggatcaag gtgaccgcgc tcgggagtcg ctacttcagc gaatcactca cccggatgaa
     2161 ggatccgtgg ggtcgcgaaa tcttctggat cggcggcggg gagattcact ggaccggcgg
     2221 cgccgagtcg gaccaccagg ccgtgtcgga gggctacatc tcgatcacac cgctccacat
     2281 ggatctcacc aactatcgtc tcatcgaaac cgtccgctca tggtccatcg aggcctgaac
     2341 gaaaacgacg ggtacggcgg ttatcgctcg cagctggtag ccgagctgca ggcgaaaggc
     2401 atccgcgacc tcgccgtgct ccgggcgatc gcgcgggtgc cgcggcacct ctttgttccc
     2461 gagagcgtgc ggcaccgcgc ctacgaggac tcggcgctgc cgatcggggg aggtcagacc
     2521 atctcccagc cctgggttca ggcccgttcc ctcgagctgg cgcgtctcac tggacgggag
     2581 cgggtgctgg aggtgggaac cgggtcgggg taccagaccg cgctcctcgc cgagctcgcc
     2641 gatcaggtgt tctccgtcga acgaatccct gcgctggcgc agaccgcccg tgccgcactc
     2701 gaggccgcgg gggtccgcca tgtgacggtg ctggtcggcg atgggtcgct gggttggcgt
     2761 ccgtacgccc cgtacgacgc catcatcgtg gccgctgctt c
//
LOCUS       DATIFF010000264         1747 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1266933, whole genome shotgun sequence.
ACCESSION   DATIFF010000264 DATIFF010000000
VERSION     DATIFF010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1747
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1266933"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1122
                     /locus_tag="VLD58_03885"
     CDS             <1..1122
                     /locus_tag="VLD58_03885"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HSB53466.1"
                     /translation="LIDVENYMKLRTRAEVQLRGPFFHPVLTGTGSLSNSVIYFADLI
                     SKDIINLENPLTADLVDTLALREQDLLANIQSRFLDSLTIRDVDFIAREGVWLRSNEA
                     NFQLEGRVRVNKVPRRDPSAPIYRLDGTFDTPRGTYTLKAGGFINRTFTVERGTVRYL
                     GDLNADLDVQARHVVKTPQGSGSDIPVIAHITGTLLVPKLTLQTPPDRSPMSEPELIS
                     LLILGTTDPVGAQLVGSRDQSVKAAVALATNALSSELQRALISDLGAPLDIVEIRPGL
                     GTSGFVGGVSSTPTQLAVGRAITNKLFITGNAGFCFAGGQGSFSARNFGASLEYRFRR
                     ELRAVISAEPLQTCSSRGVDAFFQKRYQFGAELRWDRDY"
     gene            1125..>1747
                     /locus_tag="VLD58_03890"
     CDS             1125..>1747
                     /locus_tag="VLD58_03890"
                     /inference="COORDINATES: protein motif:HMM:NF012981.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HSB53467.1"
                     /translation="MATALLITNPVAARTDEATRCRVVDVLTTAGWKTEIAVTGAPGD
                     ARRFARDGVAAGVDAIAVFGGDGTTMQAAAELVGHQVPLALIPGGTGNLLAGNLGIPG
                     DPVAAARLLVRGRPRTIDLGRVILPDGAHYFGVACGAGMDAHVMGQTRTPNKRRWGIG
                     AYLATTFRALPEIRSSRCTVTVDGERMEVLAAMILIMNCGQIIPPVVR"
BASE COUNT          276 a          621 c          585 g          265 t
ORIGIN      
        1 ctcatcgacg tcgagaacta catgaagctc cggacccgcg ccgaggtcca gctccggggg
       61 cccttcttcc atcccgtgct gaccggcacc gggagcctgt cgaacagcgt catctacttc
      121 gccgacctga tctcgaagga catcatcaac ctcgagaatc cgctcaccgc ggacctggtg
      181 gataccctgg cgctccggga gcaggacctt ctggccaaca tccagagccg gttcctcgac
      241 tcgctcacga tccgcgacgt ggatttcatc gcccgggaag gcgtctggct gcggtcgaac
      301 gaggcgaact tccagctgga gggccgggtc cgggtcaaca aggtgccccg gcgcgatccg
      361 agcgccccga tctaccggct cgacggcacc ttcgatacgc cgcgggggac gtacaccctc
      421 aaggcgggag gcttcatcaa ccggaccttc accgtggagc gggggacggt gcgttacctc
      481 ggcgacctca acgccgacct cgacgtccag gcccgccacg tggtgaagac accgcagggg
      541 agcgggagcg acattccggt cattgcgcac atcaccggga cgctcctggt gcccaagctg
      601 acactccaga cgccgcccga ccgatccccg atgtcggagc cggagctcat ctcgctgctc
      661 atcctgggca cgaccgaccc ggtcggtgcc cagctggtcg ggagccggga ccagagcgtc
      721 aaggcggcgg tggcgctggc gaccaacgcc ctctccagtg agctccagcg cgccctgatt
      781 tccgacctcg gcgccccgct cgacatcgtc gagatccggc ccggactcgg caccagcgga
      841 ttcgtggggg gggtcagctc gacccccacc cagctggccg tgggacgggc gatcacgaac
      901 aagctcttca tcaccggaaa cgcaggcttc tgtttcgccg gcggccaggg cagtttcagc
      961 gcccggaact tcggcgccag cctcgaatac cgcttccgcc gcgagctccg cgcggtgatc
     1021 tccgcggagc cgctgcagac ctgcagttcg cggggcgtgg acgccttctt ccagaagcgc
     1081 taccagttcg gggcggagct ccgctgggac cgggactact gaccatggcc actgcgctgc
     1141 tcatcaccaa tcccgtcgcc gcgcgcaccg acgaggccac ccgatgccgg gtggtggatg
     1201 tgctcacgac ggcgggttgg aagaccgaga tcgccgtcac cggcgcgccc ggcgacgccc
     1261 gccggttcgc ccgcgacgga gtcgctgccg gcgtggacgc catcgcggtg ttcggcggcg
     1321 acggcaccac gatgcaggct gcggcggagc tggtgggaca ccaggtcccg ctggcgctga
     1381 ttcccggcgg caccggcaat ctcctcgccg ggaatctcgg catacccggg gatccggtgg
     1441 cggccgcgcg tctcctcgtg cgcggccgcc cacgcacgat cgaccttggc cgcgtgatcc
     1501 tgcccgacgg ggcccactac ttcggagtgg cgtgtggcgc ggggatggac gcgcacgtga
     1561 tgggccagac ccggacgccg aacaagcgcc gctggggaat cggggcctac ctcgccacga
     1621 ccttccgcgc cctgccggag atccgcagct cgcggtgcac ggtgacggtg gatggagagc
     1681 ggatggaggt gctcgccgcg atgattctga tcatgaactg cggtcagatc attccgccgg
     1741 tggttcg
//
LOCUS       DATIFF010000265         1284 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_343550, whole genome shotgun sequence.
ACCESSION   DATIFF010000265 DATIFF010000000
VERSION     DATIFF010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1284
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_343550"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1284
                     /locus_tag="VLD58_03895"
     CDS             <1..>1284
                     /locus_tag="VLD58_03895"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSB53468.1"
                     /translation="TLVDPSFLTALNARIGDTMSLGETRYRIAGTVTRFPGDAGISSA
                     FGSRVYIPASTLPDTRLLGFGSRVDYDWYVRTPATLDTRAFASTWRAKLRPLLGRLRT
                     AAEEERDLKSNLDQLGRYLGLVALIALLLGGIGVGSAIQVFIRRKRDSIAVLRCLGAT
                     SGQVFAAYLLQAAVMGLAGSALGVGLGLLIQLALPKVFGAFMPLDVSVSPSVSAVLTG
                     LGVGIWVSTIFALLPLLGIRRVPPLAVLRRDVETGGSTRADRWTWTARVGLGLSVIGL
                     ASLEVRNLLKGAAFSVAIGVALLVLYLAARGLTAALRRWFPHRLSYVLRQGLSNLYRP
                     ANQTVAVVLSLGFGAFLLGALAVSQHNLLAQLRLDGGLGRPNLLFFDIQPDQLGPVEK
                     ILEAHSLAHQPPVPIVPMRIAAINGKTAAELLADTL"
BASE COUNT          163 a          472 c          426 g          223 t
ORIGIN      
        1 acgctggtcg acccctcgtt cctcaccgcg ctcaacgccc ggatcggcga caccatgtcg
       61 ctgggcgaga cccggtatcg catcgccggc acggtcaccc gtttcccggg cgacgccggg
      121 atcagctccg ccttcggctc ccgggtctac atccccgcca gcaccctgcc cgacaccagg
      181 ctgctcggct tcggcagtcg agtggactac gactggtacg tccggacacc ggcgacgctc
      241 gacacccggg ccttcgcctc gacctggcgg gccaagctcc ggccccttct cggtcggctc
      301 cgcactgcgg cggaagagga acgcgatctc aagagcaacc tcgaccagct gggccggtac
      361 ctcggcctgg tagcgctcat cgccctgctc ctcggcggga tcggagtggg gagtgcgatc
      421 caggtcttca tccggcgcaa acgcgattcg atcgccgtgc tccgctgcct cggggccacc
      481 agcgggcagg tctttgccgc ctacctgctc caggcggcgg tgatggggct cgcgggaagc
      541 gctctgggtg tgggactcgg gctgctgatt cagctcgccc tcccgaaggt cttcggcgcc
      601 ttcatgccgc tcgatgtctc ggtcagccct tcggtgagcg cggtgcttac cggcctgggc
      661 gtcgggatct gggtgtccac catctttgcg ctgctgccgc tcctcggcat ccgccgggtg
      721 ccgccgctcg cagtgctgcg ccgggatgtg gaaaccggcg ggagcacccg cgccgaccgc
      781 tggacctgga ccgcccgcgt gggcctgggc ctcagcgtga tcggtctggc cagcctcgag
      841 gtacggaatc tcctcaaggg cgccgcgttc tcggtcgcga tcggggtggc gctgctggtg
      901 ctctacctcg cggcacgggg actcactgcg gcgctgcggc gctggttccc gcaccggctg
      961 tcctacgtgc tgcggcaggg actctccaat ctctaccgcc cggccaatca gaccgtagcg
     1021 gtggtgctct cgctcggctt cggggccttc ctgctcgggg cgctggcggt cagccagcac
     1081 aacctgctgg cgcagctccg gctcgatggc ggactgggcc gccccaacct gctcttcttc
     1141 gacatccagc ccgaccagct gggaccggtg gagaagattc tcgaagccca cagcctcgcc
     1201 caccagccgc cggttccgat cgtgccgatg cggatcgccg cgattaacgg gaagaccgcg
     1261 gccgagctcc tggcggacac gctg
//
LOCUS       DATIFF010000266         1812 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1728093, whole genome shotgun sequence.
ACCESSION   DATIFF010000266 DATIFF010000000
VERSION     DATIFF010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1812
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1728093"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(195..1253)
                     /locus_tag="VLD58_03900"
     CDS             complement(195..1253)
                     /locus_tag="VLD58_03900"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HSB53469.1"
                     /translation="MPSTLDAQPVVAGSAKCLVVDDEPGVRRSLVRMLQAQGFHCHEA
                     GSGVEALELLDQIGETPLVVSDMRMPELDGIGFLEAVRNRYPDTSVIMLTGLSETTTA
                     VDCLHMGAADFLLKPISMSELQARVARALEKRALVLQNRYYQENLERQVREQAQRIQE
                     LFLQGVQMLARALEAKDAYTRGHSIRVSRYAVATARGMGFAGVPLDGIRLGGELHDIG
                     KIGTREALLHKPGSLTDDEFRQISEHPILGERMLYPLARESPDVLRIVRSHHERLDGR
                     GFPDGLRGERIPIEARIVAVADAFDAMTTRRPYRESRPPEQAMAELRRVAGPQLDPDA
                     VEAFVSAHPHPERPPLSA"
     gene            1614..>1812
                     /locus_tag="VLD58_03905"
     CDS             1614..>1812
                     /locus_tag="VLD58_03905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53470.1"
                     /translation="MPGVQARLRSDHQRKYPELNPAKWYNVAPIFPGVTQRMVNMAGE
                     RLTRLATPRGFVILRAEHLEFR"
BASE COUNT          271 a          590 c          678 g          273 t
ORIGIN      
        1 cgccgcggcg gaggagctgc tcggggcccg ggaggcggca ctggcggcga tgcgtgcgcg
       61 gggggtcatg gtgctggacg tgctgccggc gacggcgagc tcggcggtgg tggagcggta
      121 ccaccagctg aagcggagag ggatgttgta gggcgggacg gcggggaggg aggaacgccc
      181 tccccgcctc cgagtcaggc cgacagcggc ggccgctccg ggtgcggatg cgccgacacg
      241 aaggcctcca ccgcatcggg gtcgagctgg ggaccggcca cgcggcgtag ctcggccatg
      301 gcctgctccg gcgggcgtga ctcgcggtac ggccgccggg tggtcatggc atcgaaggca
      361 tcggccaccg ccacgatccg cgcctcgatg ggaatccgct cgccccggag gccgtcgggg
      421 aacccgcggc cgtcgagccg ctcgtggtgg gagcggacga tgcgcagcac gtcgggcgac
      481 tcccgggcga gggggtacag catccgctcg ccgaggatgg gatgctccga gatctggcgg
      541 aactcgtcgt cggtcaggct gccgggcttg tgcagcagtg cctcgcgggt tccgatcttg
      601 ccgatgtcgt gcagctcgcc ccccaggcga atgccgtcca gcggaacccc ggcgaacccc
      661 atgccccgcg ccgtggccac ggcgtagcgg ctgacccgga tggagtgccc gcgggtatat
      721 gcgtccttgg cctcgagcgc ccgggccagc atctggacgc cttggagaaa gagctcctga
      781 atccgctggg cctgctcccg cacctgccgc tcgaggttct cctggtagta gcggttctgc
      841 agcaccaggg cgcgcttctc gagcgcacga gccacccgcg cctgcagctc gctcatggag
      901 atcggcttga gcagaaagtc ggccgcgccc atatggaggc agtcgaccgc cgtggtggtc
      961 tcgctcagac cggtgagcat gatgacggag gtgtcggggt agcggttccg caccgcctcg
     1021 aggaagccga tgccgtcgag ctccggcatt cgcatgtcgg agaccacgag cggggtttcg
     1081 ccgatctggt ccaggagctc cagggcttcg accccgctgc cggcctcgtg gcagtggaac
     1141 ccctgggcct ggagcatccg gaccagtgac cgtcggaccc cgggctcgtc atccacgacg
     1201 aggcatttgg cggagccggc cacgaccggc tgcgcgtcca gagtactggg catgattgac
     1261 agtctacttg aggtgggcga tggatgccac gaacatccaa tcgcttacac tgtaagcaat
     1321 ccgcccggaa ttgtccactg tcacctcgtc aggctggggt cggtgcgggt gtgccacact
     1381 tggcaggcgg ggagtagggc caaggtaggc cagccccatc cggaattcgg tgccgaaagt
     1441 cacaggggcg ggccgaaatg gtgccgggcg gggcccggcg ggggccagtc ggacgagccc
     1501 gcgcggcggg ggtgatcggg ggcttctacc ggcagaggcg cgttcgttag attgggaccg
     1561 tcccccgcga accatccgga gtcgtggccc ggccgtgccg gcgaggagat gcgatgccag
     1621 gtgtgcaggc ccggttgcgc tccgaccatc agcgcaagta ccccgagctc aatcccgcca
     1681 agtggtacaa cgtggccccg atctttccgg gggtcactca gcgcatggtg aacatggcgg
     1741 gtgagcggct cacccggctg gcgaccccgc ggggcttcgt catcctccgg gccgaacacc
     1801 tcgagttccg gc
//
LOCUS       DATIFF010000267         1010 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_651316, whole genome shotgun sequence.
ACCESSION   DATIFF010000267 DATIFF010000000
VERSION     DATIFF010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_651316"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..204
                     /locus_tag="VLD58_03910"
     CDS             <1..204
                     /locus_tag="VLD58_03910"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HSB53471.1"
                     /translation="MSYGPSQADQYRRAAIYVDRILKGARPADLPVEQPTKFDLVINL
                     KAARALGLTIPTGLLQRADQVIE"
     gene            251..835
                     /locus_tag="VLD58_03915"
     CDS             251..835
                     /locus_tag="VLD58_03915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53472.1"
                     /translation="MSPSETPAPDGRRFPLLTEATMTPRQRESYQKIVSGPRKGASGP
                     FNALLRSPEAADRIQMVGEYVRFQSSIPAALNEMAILITGRFWSAQFEFWAHRRLART
                     AGLPDPIIDAIAEGRRPTAMSEDQRIVYDFCTELFRDRAVGDATFKAASDRFGPQGVI
                     DLIAASGYYSIVSMVLNVDRYPLPAGEEPPLRPL"
BASE COUNT          163 a          378 c          312 g          157 t
ORIGIN      
        1 atgtcgtacg gccccagcca ggccgaccag taccgccgcg ccgccatcta tgtcgatcgc
       61 atcctgaagg gtgcccggcc ggcggacctg cccgtcgagc agcccacgaa gttcgacctg
      121 gtcatcaacc tcaaggccgc cagggccctc ggcctgacca tcccaacggg gctcttgcag
      181 cgggccgatc aggtgatcga gtgaggagcc tgccccctgc cgtgccgcat ccatccgagg
      241 aggatcatcc atgagcccat ccgagacccc ggcccccgac ggccgccgct tcccgctcct
      301 caccgaggcc accatgaccc cgcgccagcg cgagagctac cagaagatcg tgtccggccc
      361 gcgcaagggc gcgagcggtc cgttcaacgc cctgctgcgc agccccgagg ccgccgaccg
      421 gatccagatg gtcggcgagt acgtccggtt ccagagcagc atcccggccg cgctcaacga
      481 gatggcgatc ctgatcaccg ggcgcttctg gagcgcgcag ttcgagttct gggctcatcg
      541 ccgcctggcc cgcaccgccg gcctgcccga cccgatcatc gacgcaatcg cggaagggcg
      601 ccggccgacc gcgatgagcg aggatcagcg catcgtgtac gacttctgca ccgagctctt
      661 ccgcgaccgg gcggtcggcg acgccacctt caaggccgcc agcgatcgct tcggcccgca
      721 gggcgtcatc gacctgatcg cggcgtccgg ctactactcg atcgtctcga tggtcctgaa
      781 tgtcgaccgc tacccgctgc ccgcgggcga ggagcccccg ctcaggcccc tctagccctt
      841 tccggcgcgc cgctcctgaa gtatctactc aagattgacc ccctttgctt tgataggcag
      901 ctaggcgtcc agcccgtcca acccaagggg ggccatgatc aagctcagtg acgtgaaggt
      961 tcggccgcag tatcggacgc gggtgcggta tcgcctgctg gtgctggagt
//
LOCUS       DATIFF010000268         2247 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1421163, whole genome shotgun sequence.
ACCESSION   DATIFF010000268 DATIFF010000000
VERSION     DATIFF010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2247
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1421163"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            130..2133
                     /gene="tkt"
                     /locus_tag="VLD58_03920"
     CDS             130..2133
                     /gene="tkt"
                     /locus_tag="VLD58_03920"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HSB53473.1"
                     /translation="MNPLYLDSAWRTINTLRALAMDAVEQAQSGHPGTPMALAPAAYV
                     LWDRFLRFDPAAPDWADRDRFILSCGHASMLIYGLLHLGGYQVSLEDLKQFRQWGSRT
                     PGHPERGHTPGVETTTGPLGQGVGNAVGMAIAERVLAERFNRPGFPVVAHRIWGFVSD
                     GDLMEGVASEAASIAGHLKLGHLNLIFDDNHITIDGDTALSFTEDVGRRFEAYGWQVQ
                     RVGDANDLAGIAAALENARVEVNRPSLILLRSHIADPAPTKRDTAAAHGAPLGKEEVK
                     RTKEILGWPETPFFVAPEAIEWRERCRARGREAHEAWTGLFERYRSAHPELAAELEAW
                     LSGKLPAGWDAGLPVFTPADGTLATRQASAKALNAIAARVPNLMGGSADLAESTGADI
                     KGAGSFGPGKQGRNFHWGVREHGMAACLNGMAAHGGIRPFGSTFLIFTDYCKPSIRLA
                     GLMHLPVIFIGTHDSIGLGEDGPTHQPIEQLAMLRATPNVTVIRPADANETVEAWKAA
                     AERNDGPTVLALSRQKLPIFDRSRLGSAEGTRRGGYVLLDAKGGKPEVIVIATGSEVA
                     LALGAVEKLQADGLAVRLVSLPSWELFEAESADYRESVLPGAVTKRVSVEAATSFGWE
                     RWVGREGVILGIDHFGASAPAEVLYRQFGLTQEAIIAAVRKLA"
BASE COUNT          358 a          757 c          764 g          368 t
ORIGIN      
        1 gtataatgtt tttagtacaa acactgaaca agtatagcct cccgtgtcgt cccccgccag
       61 caccgattag tttggtccgt cctttccgga gaccccctcc tgaccacttc cgcgatcgcg
      121 ccctctccgg tgaatccgct ctacctggat tccgcctggc gcaccatcaa cacgctccgc
      181 gcgctcgcca tggatgcagt ggagcaggcg cagtctggcc accctggtac tccgatggcg
      241 ctggcgcccg cagcctacgt gctctgggac cggttcctcc gcttcgatcc ggcggcgccc
      301 gactgggcgg accgggatcg gttcatcctc tcctgcggcc acgcctcgat gctgatctat
      361 ggcctcctcc atctgggggg ctaccaggtc tcgctcgagg acctgaagca gttccggcag
      421 tggggatcgc ggaccccggg ccacccggaa cggggccaca ctccgggcgt ggagacgacc
      481 accggcccgc tgggtcaggg cgtcggcaac gcagtcggca tggccatcgc cgagcgggtg
      541 ctggctgagc gtttcaaccg gccggggttc ccggtcgtgg cccaccggat ctggggcttc
      601 gtgagcgacg gcgatctcat ggaaggggtg gcctcggagg cggcctcgat cgccgggcat
      661 ctcaagctgg ggcacctgaa cctgatcttc gacgacaatc acatcaccat cgacggcgac
      721 accgccctca gcttcaccga ggatgtgggg cgccggttcg aggcgtatgg ctggcaggtc
      781 cagcgggtag gtgatgccaa cgacctggcc ggcattgccg cggcgctcga gaacgcccgg
      841 gtggaagtga accggccgtc gctgattctc ctccggagcc atatcgccga tcccgccccc
      901 accaagcgcg acacggcggc ggctcacggc gcgccgctcg gcaaggaaga ggtgaagcgg
      961 accaaggaga ttctgggctg gcccgaaaca ccgttcttcg tcgcccccga agcgatcgag
     1021 tggcgggagc gctgccgcgc gcgcggccgc gaagcgcatg aggcgtggac cgggctcttc
     1081 gagcgctatc gcagcgccca tcccgaactc gcggccgagc tcgaggcgtg gctttcgggc
     1141 aagctgccgg caggatggga tgccggtctt cccgtcttca cgccggccga cggtaccctc
     1201 gcgacgcggc aggcctcggc gaaggcgctc aatgccatcg cagccagggt cccgaatctc
     1261 atgggcggtt ccgccgacct ggccgagagc accggcgccg acatcaaggg tgcggggagc
     1321 ttcgggcccg ggaagcaggg acgcaatttc cattgggggg tgcgggagca cgggatggcg
     1381 gcgtgtctca acggcatggc cgcccacggc ggtatccgtc ccttcggcag caccttcctg
     1441 atcttcaccg actactgcaa accatcgatc cgcctcgccg ggctcatgca cctgccggtg
     1501 atcttcatcg gcacccatga ctcgatcggc ctgggcgagg acggcccgac acaccagccg
     1561 atcgagcagc tcgccatgct ccgggccaca cccaatgtca ccgtgatccg ccccgcggac
     1621 gccaacgaga ccgtcgaggc gtggaaggcg gcggcagagc ggaacgatgg gcccacggtg
     1681 ctggcgctgt cccgccagaa gctccccatc ttcgaccgga gcaggctcgg atccgccgag
     1741 ggcacccggc gcggcggcta tgtgctgctg gatgccaagg gtgggaagcc cgaggtcatc
     1801 gtcatcgcga ccggatcgga agtggcattg gcgctgggcg ccgtggagaa gctccaggcc
     1861 gacggcctgg cggtgcggct ggtatcgctg ccttcgtggg agttgttcga agcggagagt
     1921 gccgactatc gtgagtcggt gctgccgggc gcagtgacga agcgggtgtc ggtggaagcc
     1981 gccacctcct tcgggtggga gcgctgggtc ggccgcgaag gggtgatcct cggaatcgat
     2041 cacttcggcg cgtcggctcc ggcggaggta ctgtaccggc agttcggtct gacgcaggaa
     2101 gccatcatcg ccgccgttcg gaagctcgcc tgaaccagga tagccaatga ccaatcctct
     2161 cgtgcaactc ggtggcctgg gccagagccc gtggtacgac ttcatcaccc gcgacctcgt
     2221 ctcctcaggt gagctggcgc ggctgat
//
LOCUS       DATIFF010000269         1091 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1882582, whole genome shotgun sequence.
ACCESSION   DATIFF010000269 DATIFF010000000
VERSION     DATIFF010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1882582"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..308)
                     /locus_tag="VLD58_03925"
     CDS             complement(<1..308)
                     /locus_tag="VLD58_03925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53474.1"
                     /translation="MPWTAAHLTRIPAVAGLALLAAALPAKAQRPGPLEPGRIRVCAD
                     PDNMPSSNDKLEGYENKLAALIAKELNSKLEYVWYPTRRGYFRILNGMYCDLAVEVPA
                     G"
     gene            complement(458..>1091)
                     /locus_tag="VLD58_03930"
     CDS             complement(458..>1091)
                     /locus_tag="VLD58_03930"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSB53475.1"
                     /translation="YGTSSKKNGEGICPAAIGFKDQQPAAYSPITGMFYVPANHICMD
                     YEGVEVKYTAGQPYVGAIVRMFPGPGGHRGRFISWDPMKGKVNWEIKENLAAYGGALA
                     TAGGVVFYGTMEGWLKAVDAKTGKVLWQYKTPSGIIGNPMTYTAPDGSQNVAVYSGIG
                     GWAGIGVAAGIGAEDPTAGLGALGAFGDAGSFSTQGGVMTVFGLKNPAMK"
BASE COUNT          175 a          360 c          377 g          179 t
ORIGIN      
        1 ccggcgggga cctccaccgc gaggtcgcag tacatcccat tgagaatgcg gaagtagccg
       61 cggcgggtgg gataccagac gtactcgagc ttggaattga gctccttcgc gatgagcgcg
      121 gcgagcttgt tctcgtagcc ctcgagcttg tcgttcgagg acggcatgtt gtccgggtcg
      181 gcgcagaccc ggatgcgccc gggctcgagc ggcccggggc gctgggcctt cgcgggcagg
      241 gcggcggcga gaagggccag accggcgacg gccggtatgc gggtcaggtg agctgcagtc
      301 cacggcatgg cgtacccctg cgagagcaac gggtggggcc acaggccccg gaatggcacg
      361 gcgccggagc tgaccgcgcc ccggcgccgt gctcgttcgg taatctatcc ccaagctgac
      421 cggagggggt accctccggc cggcagggga cttccgctta cttcatagcg ggattcttga
      481 gcccgaagac ggtcatgacg ccgccctggg tcgagaagct gcccgcgtcg ccgaaggcgc
      541 cgagcgcgcc aagaccggcg gtcggatctt cggcgccgat gccggcggcc acgccgatgc
      601 cggcccagcc accgataccg gaatacactg ccacgttctg cgacccgtcc ggagcggtgt
      661 aggtcatcgg gttgccgatg atgcccgacg gggtcttgta ctgccagagg accttaccgg
      721 tcttggcatc gacggccttc agccagcctt ccatggtgcc gtagaacacc acaccaccgg
      781 cagtggccag cgcgccgccg tacgcggcga ggttctcctt gatctcccag ttgaccttgc
      841 ccttcatcgg atcccaggag atgaaccggc cgcggtgacc gccggggccc gggaacatcc
      901 gcacgatcgc gccgacgtag ggctgaccgg cggtgtactt cacctccaca ccttcgtaat
      961 ccatgcagat gtggttcgcc gggacgtaga acatcccggt gatcggcgag tacgccgcgg
     1021 gctgctgatc cttgaagccg atggcggccg ggcagatgcc ctcgccgttc ttcttcgagg
     1081 aggtaccgta c
//
LOCUS       DATIFF010000270         4792 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1421203, whole genome shotgun sequence.
ACCESSION   DATIFF010000270 DATIFF010000000
VERSION     DATIFF010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4792
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1421203"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..471)
                     /locus_tag="VLD58_03935"
     CDS             complement(<1..471)
                     /locus_tag="VLD58_03935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53476.1"
                     /translation="MRPGLRDVDAADRAQFLKLFVYLLPYAGLLLLAGEFLAYGKGWI
                     GGWTLLVLILLTVPAIYVFARILFFFMDHSAKAFTNVVLAGGNLPPDPAHSSFESLAV
                     RGFYAEAAEAYRDHLIRKPADHLARVKLAELYLKHFDDPGSAERLYLEIRKGQPS"
     gene            complement(468..2111)
                     /locus_tag="VLD58_03940"
     CDS             complement(468..2111)
                     /locus_tag="VLD58_03940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53477.1"
                     /translation="MPWRLGPALTCCGLLLLAASCASQSLPAPSGTLAHLEIDYQDLR
                     YWDDQSRLLGSLASDTTPAGLPAAAIAENLSLARHTFELEFTRVDTATLDSTDRAARA
                     AMQEAWREVLRGSAVDTSGGADSLGALTSAIYADYGRVAGRIVVGDDTLNRLAILGRL
                     GREEKGEARRRLFLALAPVWESVNGDNGESSPYRTLLRLRRQTWGASGSPIEAKAPAF
                     GLSTGELERWLTRALHQWRAAMPDTLMEPWDWYYYAGEASRLLSPRLPAVADLARVNQ
                     LFYRSIGAEPERLGIRYDLFPRVGKDPVAFTDFGSRRRWSLRGWVPAEPWVFTAYLDG
                     GFDNLGELLHETGHGIHLAAIRTRPAWNDWPDNDTFTEALADLPALELYEPRWQRRFL
                     GASAPLAVSLRARYAGIMMDMVWALFEIRVHRVPGADPNRLWSELTREYLGIVPHPEW
                     SWWAMRGQLIDSPGYLVNYAFGAFLTADLRARAAALDHPVAADHAYLYPWLANTLYRW
                     GRERTSRRVLEEFLGRPVRPDALLADLARMQPHSTERSP"
     gene            complement(2141..>4792)
                     /locus_tag="VLD58_03945"
     CDS             complement(2141..>4792)
                     /locus_tag="VLD58_03945"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSB53478.1"
                     /translation="TDIYGSAMRPVLSPDGRWLVYAVRHDGETGLRLRDLQNGDERWL
                     KYPVQRDDQESRFTRDLMPGSSFTPDSKALVTTWNGKIWRVELASGTAAEVPFTASVK
                     LELGPLVKFDTPVETGDIELRQVRDAQLSPDGKRLAMSALDRLYVMDYPGGKPKRLTS
                     DTVHEQHPAWSPDGKSIAYITWSNTGGSIRVVSSDGGSPRRLTSEPAFYQYPTWAPGG
                     DRIVALRGPRGARVSEAFGPGYELVWLPSKGGTPVKIAPVNPGGRPHFSGDPNRIYIY
                     DPGDGLVSMRYDGTDRVQHVKITGFTVNSPGAEPNTADEILIAPDSQRVLALVNNYIY
                     LIDVPKTGQRPLAINIADPKAAIFPAQRLTRIGGDFIGWSGDSRSVNWSIGRSFFRYR
                     IPVADSLARLKASADSARADSVKTLGAKADSAFKARVDSLAKQPAYQADRLDIVIKVP
                     RDVPHASVIFTGARIITMKGDEVIENGTLVVTDNRIACVGAAGACQPPAGAKTIDLAG
                     KTVMPGLVDIHAHPWPAWGVHQPQVWKYLANLAWGVTTTRDPQTSTTDVLTYADQVDA
                     GDLIGPRIYHTGPGVFGPYIEEPFTSLEDVQNSLKRYSEFYRINTIKQYMAGNRKQRQ
                     WVIMAAQQQKLMPTIEGGLDFKMNLTVAMDGYPGHEHSLPIMPLFNDAVQLYARSGIT
                     YTPTLLVSYGGPWSENYFYEKYDIHDMPKVRRFIPHSEIDNRAERRPWFRENQFVFAR
                     IAEGAKKIVEAGGHVGLGGHGQLDGLGDHWELWAMAAGGMKPHDVLRVGTIFGAQAIG
                     FGQDLGSLEPGKLADILVLNGNPLEDIHNTNTVRYVMKNGRLYDGDTLDEVYPRARPL
                     ARQWWWDGNTGDVGATRPPTEDLVPQP"
BASE COUNT          742 a         1547 c         1724 g          779 t
ORIGIN      
        1 agaaggctgg cccttccgga tctccaggta gaggcgctcg gctgaccccg gatcgtcgaa
       61 gtgcttgaga tacaattccg ccagcttcac gcgggccagg tgatcggccg gcttccggat
      121 gaggtggtcc cggtaggcct cggccgcctc ggcgtagaag ccgcggacgg ccagggactc
      181 gaaggaggag tgagccgggt cgggcggcag gttgccaccc gccagcacca cattggtgaa
      241 cgccttggcc gagtggtcca tgaagaagaa gaggatgcgc gcgaagacgt agatggccgg
      301 cacggtcagg aggatcagga ccagcagggt ccatccgccg atccacccct tgccgtacgc
      361 caggaactcg ccggccagga gcaagaggcc ggcgtagggg agcagataga cgaacagctt
      421 gaggaactgg gcccggtccg cggcgtcgac gtcgcgcagc ccgggtctca tggtgacctc
      481 tccgtcgagt gtggctgcat ccgcgcgagg tcggccagca gcgcatcggg tctcaccggc
      541 cggccgagaa actcctccag cacccgtcgg ctggtgcgtt cacggcccca acggtagagc
      601 gtattggcca gccaggggta gaggtaggca tggtcggcag ccacgggatg atccagggcc
      661 gcggcgcggg cgcggaggtc ggctgtgagg aatgcgccga aggcgtagtt cacgaggtag
      721 ccggggctgt cgatgagctg gccgcgcatg gcccaccagg accattcggg atgtggcacg
      781 atcccgagat actcccgggt gagttcactc cagagccggt tgggatccgc gccgggcacc
      841 cggtgcaccc ggatttcgaa cagcgcccag accatgtcca tcatgatgcc ggcgtagcgg
      901 gcccggagcg agaccgcgag cggcgcgctg gcgccgagaa agcgacgctg ccacctcggc
      961 tcatagagct ccagcgcggg caggtccgcc agcgcctcgg tgaaggtgtc attgtcgggc
     1021 cagtcgttcc aggcggggcg ggtgcggatc gcggcgaggt ggatcccgtg gccggtctcg
     1081 tggagcagct cgcccaggtt gtcgaagccg ccgtcgagat aggcggtgaa gacccagggc
     1141 tccgctggca cccatccgcg cagactccac cgccggcgac tgccgaaatc ggtgaacgcc
     1201 accggatcct tgcccacgcg agggaagaga tcgtagcgga tccccaggcg ctcgggttcc
     1261 gcgccgatgg agcggtagaa gagctggttc acccgggcca gatcggccac cgccgggagc
     1321 cgcgggctca ggagccggct ggcttctcca gcatagtagt accagtccca cggctccatg
     1381 agagtatcgg gcatcgcggc ccgccactgg tggagtgcgc gggtgagcca gcgctcgagc
     1441 tccccggtcg agagtccgaa tgctggagcc ttggcctcga tgggcgagcc gctggccccc
     1501 caggtctggc gccggagacg gagaagggtc cggtaggggc tcgactcacc gttgtcgccg
     1561 ttgacgctct cccataccgg cgcgagcgcc aggaagaggc ggcgcctcgc ctcacctttc
     1621 tcctcgcgcc cgagccggcc gaggatggca agccggttga gggtatcgtc gcccaccacg
     1681 atccggccgg cgactcggcc atagtcggca tagatggcgc tggtcagcgc tccgagcgag
     1741 tcggccccgc cggatgtgtc gaccgcgctt ccccggagta cctcgcgcca ggcctcctgc
     1801 attgcggccc gcgccgcccg gtcggtgctg tcgagcgtgg cggtgtcgac ccgggtgaac
     1861 tcgagctcaa aggtgtggcg ggccagggac aggttctccg ctatggcggc cgcagggagc
     1921 ccggcgggcg tggtgtcgct cgccagcgat ccgaggagcc gcgactggtc atcccagtag
     1981 cggaggtcct gatagtcgat ttcgaggtgg gcgagagtgc cggagggcgc cgggagactc
     2041 tggctggcgc agctcgcggc cagcagcagc agaccgcaac aggtcagggc cgggcccagc
     2101 ctccacggca tggctgccgg gcccgccctg acgctgaacc tcacggctgc ggcaccaggt
     2161 cttcggtcgg cggacgggtg gcgccgacat cgccggtgtt gccgtcccac caccactgcc
     2221 gcgccagcgg acgggcccgg ggatacacct catcgagagt gtcgccgtcg tagagccgcc
     2281 cgttcttcat cacgtagcgc accgtgttgg tgttgtgaat gtcctcgagc gggttgccgt
     2341 tgagcaccag gatgtcggcc agcttgccgg gctcgaggga gccgaggtcc tgcccgaagc
     2401 cgatggcctg ggcgccgaag atggtcccga cccgcagcac gtcgtgcggc ttcatcccgc
     2461 cggcggccat ggcccacagc tcccagtgat cgcccagccc gtccagctga ccgtgaccgc
     2521 cgagcccgac atggccgccg gcctcgacga tcttcttcgc cccttcggcg atgcgggcaa
     2581 agacgaactg gttctcccgg aaccagggcc gccgttcggc ccggttgtcg atctcggagt
     2641 ggggaataaa gcggcggacc ttgggcatgt cgtggatgtc gtacttctcg tagaagtagt
     2701 tctcgctcca cggtccgccg taggaaacca ggagcgtcgg cgtgtaagtg atacccgagc
     2761 gggcgtagag ctgcaccgca tcgttgaaga gcggcatgat cggcagcgaa tgctcgtgcc
     2821 ccgggtagcc atccatggcc accgtcaggt tcatcttgaa gtcgagcccg ccttcgatgg
     2881 tgggcatcag cttctgctgc tgggcggcca tgatcaccca ctgccgctgc ttccggttgc
     2941 ccgccatgta ctgcttgatg gtgttgatgc ggtagaactc gctgtagcgc ttgagcgagt
     3001 tctgcacatc ctcgaggctg gtgaagggct cctcgatgta ggggccgaag acgccggggc
     3061 cggtgtgata gatccgcggg ccgatgaggt cgccggcgtc gacctggtcg gcgtaggtca
     3121 gcacgtcggt ggtgctggtc tgggggtcgc gggtggtggt gacgccccac gccaggttgg
     3181 cgagatactt ccacacctgc ggctgatgca cgccccaggc gggccaggga tgggcatgga
     3241 tgtcgacgag gcccggcatg acggtcttgc cggcgagatc gatggtcttt gcgcccgcgg
     3301 gcggctggca cgcgcccgca gcacccacac aggcgatgcg gttgtcggtg acgaccagcg
     3361 taccgttctc gatcacctcg tcacccttca tcgtgatgat gcgggcgccg gtgaagatca
     3421 ccgaggcgtg cggcacatcg cgcgggacct tgatgacgat gtcgagccgg tcggcctggt
     3481 aggcgggctg cttggcgagg gaatcgaccc gggccttgaa ggcggagtcg gccttcgcgc
     3541 caagagtctt cacgctgtcg gcccgggcgg agtcggccga cgccttgagc ctggccaggg
     3601 agtcggccac cgggatccgg tagcggaaga agctccggcc gatggaccag ttcacgctcc
     3661 ggctgtcgcc actccagccg atgaagtcgc cgccgatcct ggtgagacgc tgcgccggga
     3721 agatcgcggc cttggggtcg gcgatgttga tcgcgagggg acgctgtccg gtcttgggta
     3781 cgtcgatcag gtagatgtag ttgttgacca gcgccaggac gcgctggctg tccggcgcga
     3841 tcaggatctc atcggccgtg ttgggctcgg cgccgggcga gttgaccgtg aacccggtga
     3901 tcttgacgtg ctgcacccgg tcggtgccgt cgtagcgcat cgagaccagg ccgtcgcccg
     3961 gatcatagat gtagatccgg ttcgggtcgc ccgagaaatg gggccgcccg ccgggattca
     4021 ccggcgcgat cttgaccggc gtaccaccct tggagggaag ccacaccagt tcgtatccgg
     4081 ggccgaatgc ttccgacacc cgggctccgc gcgggccgcg cagggccacg atccggtcgc
     4141 cgccgggcgc ccaggtggga tactggtaga aggccggttc gctggtgagc cgcctgggcg
     4201 agccgccgtc gctgctcacc acccggatcg agccgccggt gttgctccag gtgatgtagg
     4261 cgatgctctt cccgtcgggc gaccaggccg ggtgctgctc gtgcaccgtg tcgctggtga
     4321 gccgcttcgg cttgccgccg ggatagtcca tcacgtacag ccggtcgagc gcgctcatcg
     4381 ccagccgctt gccgtcgggc gaaagctggg catcgcgcac ctggcggagc tcgatgtcgc
     4441 cggtctcgac cggagtgtcg aacttgacca gcggccccag ctcgagcttc accgaggcgg
     4501 tgaagggcac ttcggccgca gtcccgctgg ccagttccac ccgccagatc ttcccgttcc
     4561 aggtggtcac cagcgccttg ctgtcgggag tgaaggagct ccccggcatc aggtcgcggg
     4621 tgaagcggga ttcctgatcg tcccgctgca ccgggtactt gagccagcgc tcgtcgccat
     4681 tctgaaggtc acggagccgg aggccggtct ccccgtcatg gcgcaccgca tagaccagcc
     4741 agcgcccgtc gggcgagagg accggccgca tggcgctgcc gtagatgtcg gt
//
LOCUS       DATIFF010000271         1232 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2190277, whole genome shotgun sequence.
ACCESSION   DATIFF010000271 DATIFF010000000
VERSION     DATIFF010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2190277"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..549)
                     /locus_tag="VLD58_03950"
     CDS             complement(<1..549)
                     /locus_tag="VLD58_03950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HSB53479.1"
                     /translation="MSEQAKVPPRGKVLAGLAFTALGVVYGDIGTSPLYALKECFSGH
                     YSISPTPDNVIGVVSLVFWSLNFIVSFKYVSFVLRADNRGEGGILALLALVRPLARPR
                     GGRVALIALGLFGAALLYGDGVITPAISVLGAVEGLSVATPAFQRFVWPIAAVILAAL
                     FAVQKYGTAVIGRLFGPVMALWF"
     gene            complement(597..>1232)
                     /locus_tag="VLD58_03955"
     CDS             complement(597..>1232)
                     /locus_tag="VLD58_03955"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HSB53480.1"
                     /translation="GVAVVGLGVLGVLLSRPRTVSIPANVTIQASDTAGFRGYLKGSA
                     DAPVEITEYADFQCPFCQTFATLQMPTIEERLIRTGRLRWRYRDFPLQQHSFSRLAAH
                     SAACADEQGKYWEQHQRIYDGQAEWAAASDAGKLFRQYAQANGLDVGRYDECMRSGKY
                     AGRIQASYEEGARLGVASTPTLLVGNRLYQGRLDSDAIRRLVDSLAPLASR"
BASE COUNT          200 a          437 c          426 g          169 t
ORIGIN      
        1 gaaccagagc gccatcaccg ggccgaagag ccgcccgatc accgcggtgc cgtatttctg
       61 gaccgcgaag agcgcagcca ggatgacggc agcgatcggc cagacgaacc gctggaacgc
      121 cggcgtcgcc acgctcagcc cctccacggc gcccagcacc gagatcgccg gggtgatcac
      181 cccatcgccg tacagcagcg ccgcgccgaa gagcccgagg gcgatcagcg cgacccggcc
      241 tcccctgggc cgggccagcg ggcgcaccag ggcgagcagc gccaggatgc cgccctcgcc
      301 acggttgtcc gcccggagga cgaagctgac gtacttgaac gacacgatga agttgagcga
      361 ccagaagacc agggacacga cgccgatcac gttgtccggc gtgggagaga tgctgtaatg
      421 cccgctgaag cactccttga gggcgtagag ggggctggtg ccgatgtcgc cgtagaccac
      481 gccgagcgcg gtgaacgcca gtcccgcgag gaccttgccc ctgggaggga ccttggcctg
      541 ctcggacact caggtgctcc cgcggctgga ccggtaatcc gtccggctct cgccggtcat
      601 cggctcgcga gcggcgcgag cgagtcgacc agccggcgga tcgcgtccga gtccagccgg
      661 ccctggtaca gacggttccc caccaggagc gtcggggtcg aggccactcc cagccgggcg
      721 ccctcttcgt agctcgcctg gatccggccg gcgtacttcc ccgaccgcat gcattcgtcg
      781 tatctgccga cgtcgagccc gttggcctgg gcgtactgcc ggaacagctt gcctgcgtcg
      841 ctcgcggcgg cccactccgc ctggccgtcg tagatccgct ggtgctgctc ccagtacttc
      901 ccctgctcgt cggcgcaggc ggccgagtgg gcggccagcc gggagaatga gtgctgctgc
      961 aaggggaagt cccggtagcg ccagcgcagc cgcccggtcc ggatcagccg ctcctcgatc
     1021 gtcggcatct gcagggtggc gaaggtctgg cagaagggac actggaagtc ggcgtactcg
     1081 gtgatctcca ccggggcgtc ggccgacccc ttgaggtacc cccggaagcc ggcggtgtcc
     1141 gaagcctgga tcgtgacgtt cgccggaatg ctcacggtcc ggggtcggga aaggagcacg
     1201 ccgagcactc cgagcccgac caccgcgacc cc
//
LOCUS       DATIFF010000272         1094 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_651853, whole genome shotgun sequence.
ACCESSION   DATIFF010000272 DATIFF010000000
VERSION     DATIFF010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_651853"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1094
                     /locus_tag="VLD58_03960"
     CDS             <1..>1094
                     /locus_tag="VLD58_03960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="protease"
                     /protein_id="HSB53481.1"
                     /translation="GGQNQPVQIFDLRDSSVVKLPWDGSKDTWPVWLGDAIYFISDRD
                     WAGNVWRYDLGGRTLTQVTHYRDFDVKTLGAGGGVLAYEEAGTLHLYDPATGQDRPLT
                     ITVRGDLPWTAPRWVDAASSATSASLSPTGARALIEARGEIFTVPAEKGDVRDLTRSP
                     GAADRAPVWSPDGKQIAWFSDASGEYRLMIGTQDGLEPPREIRLDHPTFYYDPAWSPD
                     GKSLAFTDAGRNLWVVDVASGRATRADGDNYAHPDRTLVPVWSPDSRWIAYAKRLSTQ
                     YRALMVYSMVEQKARQLTDGLSDAGNPAWDAGGKYLYFLASTDYGLASGWLDLSSYER
                     HVRQAVYLAVLAADTPSPLLPESDEEGAAK"
BASE COUNT          174 a          371 c          377 g          172 t
ORIGIN      
        1 cggcgggcag aatcagcctg tccagatctt cgacctgcgc gactcgagcg tcgtgaagct
       61 gccgtgggac gggagcaagg acacctggcc cgtctggctc ggcgacgcga tctacttcat
      121 ctccgaccgg gactgggccg gcaacgtgtg gcgctatgat ctcggcggcc ggacgctcac
      181 ccaggtcact cactaccgcg acttcgacgt gaagacgctc ggagccggcg gcggagtgct
      241 ggcctacgag gaggccggta ccctgcacct ctacgatccc gcgaccggac aggatcggcc
      301 gctcacgatc accgttcgtg gcgatctgcc atggacggcg ccaaggtggg tggacgcggc
      361 gagtagcgcg acctcggctt cgctgtcccc tacaggggcc cgggccctga tcgaggcgcg
      421 tggagagatc ttcaccgtgc cggccgagaa gggtgacgtg cgtgatctca cccggagccc
      481 cggcgctgcc gaccgggcgc cggtgtggtc accggacggc aagcagatcg cctggttctc
      541 cgacgcgagc ggcgagtacc gcctgatgat cggtacccag gatgggctcg agccgcccag
      601 ggagatccgg ctggatcacc cgaccttcta ttacgacccc gcgtggtcgc ccgacggcaa
      661 atcgctcgcc ttcaccgatg ccgggcggaa cctctgggtg gtggacgtgg ccagcggccg
      721 cgcgacccgc gcggacggcg acaactacgc ccatccggac cggacgctgg tgccggtctg
      781 gtcgccggat tcccgctgga ttgcctacgc caagcggctc tccacccagt accgggcgct
      841 gatggtctac tcaatggtcg agcagaaggc ccggcagctc acggatggtc tgtcagatgc
      901 cggcaacccc gcttgggacg cggggggcaa gtacctctat ttcctcgcga gcaccgacta
      961 tgggctggcc agcggatggc tcgatctgag ttcgtacgag cgccacgtcc gtcaggcggt
     1021 ctatctggcc gtgctcgcgg cggacactcc ttccccgctc ctgcccgaga gcgacgaaga
     1081 gggcgcggcg aagg
//
LOCUS       DATIFF010000273         3912 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_805546, whole genome shotgun sequence.
ACCESSION   DATIFF010000273 DATIFF010000000
VERSION     DATIFF010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3912)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3912)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3912
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_805546"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2058)
                     /locus_tag="VLD58_03965"
     CDS             complement(<1..2058)
                     /locus_tag="VLD58_03965"
                     /inference="COORDINATES: protein motif:HMM:NF015644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0182 family protein"
                     /protein_id="HSB53482.1"
                     /translation="MSPRTRRLAALILAVVVLLFAGRWTAGILADRWWAEQLSPAAAS
                     AVTGWALLEFGLESSGILFACAWFIGHLLLVYRAIGSVQVHRRLANLEIREAVNMQVL
                     VWISVAGGLLLGVIAGRGAGSWAPEVVLSWAGKAFGATDPILGRDLTFYLTRLPVWRL
                     LHQYLLLLTLLALGGAATLYAVIGAIRWQDRRPAINDHARVHLGGLLVLLALALAWGY
                     LLEPYEMVAGVKGTVHDGLFDFRHRLAELLTGVALAAALLSLWWAVRGRHAVLLSVWG
                     LLILSSLLGHYIIPALIVGGRSSALDAATRRGLDQLAYGMIGVRDSTFALRQAIPDPP
                     RPIGLWTQSLALAATAADSGRPVSADRAVVTVGRRPRPAWLVLRDQGQQGASLTVLLD
                     DQSTTAGLPIVFHEADSLRTPAGPPSLRLSTRATWPGRAQAIVDTTAGGVAVGNGLRR
                     LAMAWALQTGSLLGPGSREQKAFWKLDPTERLQCLAPFATWGIPVPRFIGGDLVWLVD
                     GYLASSTFPGSTRVTWRDHTIGSLHAGFVGVVAAESGRTSIYLRHSADELSKQWQGLF
                     DSLIQPASAMPAEVVRALAYPAELVAAQARVMEQGHWNLGRLSGRPEEVGPTGPVDDA
                     RWKSDTSGVEAVIPYERERTVTAILQARMADGWETLSILRLDSIVTLPSGPLLQTRWT
                     KFPT"
     gene            complement(2065..3441)
                     /locus_tag="VLD58_03970"
     CDS             complement(2065..3441)
                     /locus_tag="VLD58_03970"
                     /inference="COORDINATES: protein motif:HMM:NF014877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HSB53483.1"
                     /translation="MNVPRSIFRQYDVRGLVGSELTPAFARALGRAFASLGWERLQRA
                     PIIAVGRDNRPSGDTLSAQVREGIAEAGGTAIDVGQMPTPALYFAVHALDCDGGLQVT
                     GSHNPPEFNGFKMVLAGEAIHGEDVQHLYEIISLETWRTGQGRISADGSILGRYREAI
                     VSRHRLHRPVKVVVDCGNGVGSLIAVSTLEALGADVIPLFCDSDGTFPNHHPDPTVIE
                     NLRDLQGAVRSHGAELGIAFDGDADRIGAVDETGAVIFGDQLLVLYGRDAVRRFGQGV
                     TVIFDVKCSEVLPKALTAAGARPEMWKTGHSLIKARMKETKAVLAGEMSGHMFFAGDW
                     FGFDDALFAAARLLEIVSAEPGGLARTLADLPKTFATPELRVDCEDSQKFALVEKASR
                     YFASRYPVNTIDGVRMTFANGWGLIRASNTQPILVLRFEATDRASLEAYQAEVMGWLE
                     QQRSAAVA"
     gene            complement(3561..>3912)
                     /locus_tag="VLD58_03975"
     CDS             complement(3561..>3912)
                     /locus_tag="VLD58_03975"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HSB53484.1"
                     /translation="MLSLLGFPGTVGFIGKWYIISAIIAANKPMLAILLVVTSVISAG
                     YYLPVVMSMYMRPARAPMVYYDSRLARTAGVAVTLAVIGILALGVWPVPALDLSDNAA
                     ASLPVTSSQSVAGN"
BASE COUNT          694 a         1279 c         1401 g          538 t
ORIGIN      
        1 ggtcgggaac ttggtccagc gagtctgaag cagcgggccc gaaggaagcg tgacgatgct
       61 gtcgagccgc aagatcgaga gcgtctccca cccgtcggcc atgcgagcct gcaggatcgc
      121 cgtgaccgtc cgctcccgct cgtaggggat gaccgcctcc accccgctgg tgtcgctctt
      181 ccagcgcgca tcgtcgaccg ggccggttgg tccgacctcc tccgggcgcc ccgagaggcg
      241 gccgaggttc cagtggccct gctccatgac gcgagcctgg gcggcgacca gttcggccgg
      301 atacgccagg gcccgcacca cctccgcggg catggccgag gcgggctgaa tcaggctatc
      361 gaaaaggccc tgccattgct tggacagctc gtcggcactg tggcggagat agatgctggt
      421 gcgccccgac tcggccgcga ccactcccac gaaaccggcg tggagcgatc caatggtgtg
      481 gtcccgccag gtgacgcggg tggagccggg aaaggtgctg gacgcgagat aaccgtcgac
      541 cagccagacc aggtcgccgc cgatgaaccg cggaaccgga atcccccagg tcgcgaacgg
      601 cgccaggcac tgaagccgct ccgtcggatc gagcttccag aaggccttct gctccctgga
      661 tcccgggcca agcaggctcc cggtctggag cgcccacgcc atcgcgagtc gtcggagacc
      721 gttccccact gctactccgc ccgccgtggt atcgacgatg gcctgggccc gtccgggcca
      781 ggtggcgcgg gtgctgagac ggagcgaggg cggaccggct ggagtgcgga ggctgtcggc
      841 ttcgtgaaag acgatgggaa ggccggccgt cgtggactgg tcgtccagca gcaccgtgag
      901 actcgcgccc tgttgcccct ggtcgcgcag caccagccag gccggccgag gccggcggcc
      961 gacggtgacg accgcacgat cggcggagac cggccgccct gaatcggcgg cggtggcggc
     1021 caaggcgagc gactgggtcc agagtccgat gggacgcggc ggatcgggaa ttgcctggcg
     1081 cagggcgaag gtcgagtcgc gcacgccgat catgccgtag gcgagttgat ccagacccct
     1141 gcgggttgcc gcatcgaggg cggagctccg cccgccaaca atcagggcgg gaatgatgta
     1201 gtggcccagc agcgagctca ggatcagcag gccccagacg ctgagcagaa ccgcgtgacg
     1261 cccccgcacc gcccaccaga gcgagagcag cgccgcggcc agcgccacgc cggtcaggag
     1321 ctcggcgagg cgatgccgga agtcgaagag cccgtcatgc acggtgccct tcacgccggc
     1381 gaccatctca tagggctcga ggagatagcc ccacgccagt gcgagggcga gcaggaccag
     1441 gagaccgccc aggtggactc gcgcatgatc gttgatggcg ggccgccggt cctgccagcg
     1501 gattgcgccg atcacggcgt agagggtggc cgcgccgccc aatgccagca gggtgaggag
     1561 cagcaggtac tggtgcagta gccgccagac cgggagccgg gtgagataga aggtgagatc
     1621 tcggccgaga atcgggtcgg tggcgccgaa ggccttgccg gcccagctca gcaccacctc
     1681 gggcgcccag ctccccgcgc cccgccccgc aatgaccccc agcagcagac cgccagccac
     1741 gctgatccag accagcacct gcatgttgac cgcctcgcgg atctcgagat tggcgaggcg
     1801 gcggtgcacc tggaccgacc cgatggcgcg gtagaccagc agcaggtgcc cgatgaacca
     1861 ggcacaggcg aagagaatac cgctgctctc gagtccgaac tcgaggaggg cccacccggt
     1921 gacggcggag gccgcggcgg gcgagagctg ctcggcccac caccggtcgg caagaatccc
     1981 ggcggtccat cggccggcga agagcaggac gacgaccgcc aggatcagcg cggcgaggcg
     2041 gcgggtgcgg ggggacatgt acgcctaagc taccgcggca ctgcgctgct gttccagcca
     2101 gcccatcacc tcggcctgat aggcctcgag ggacgcccgg tcggtagcct cgaagcgaag
     2161 gacgaggatc ggctgggtgt tggaggcacg gatcaggccc cagccgttgg caaaggtcat
     2221 ccggacgcca tcgatggtgt tcactgggta gcggctggcg aagtagcggc tggccttctc
     2281 caccagcgcg aacttctgcg agtcctcgca gtcgacccgg agttcggggg tggcgaaggt
     2341 cttcggcagg tcggccaggg tgcgggccag cccgcccggt tccgcggaca cgatctcgag
     2401 cagcctggcc gcggcaaaga gcgcgtcgtc gaagccgaac caatcgccgg caaagaacat
     2461 gtggccgctc atctcgccgg cgagcacggc cttcgtctcc ttcatccggg ccttgatgag
     2521 ggaatgtccc gtcttccaca tctccggcct ggcgcccgcg gcggtcagcg cctttgggag
     2581 cacctcggag cacttcacgt cgaagatcac tgtgacgccc tgcccgaacc gccgcaccgc
     2641 gtcgcggccg tagagcacca gcagctggtc cccgaagatc acggcgccag tctcatcgac
     2701 cgcaccgatc cggtcggcgt cgccatcgaa cgcgatgccc agctcggcgc catgactccg
     2761 gaccgcgccc tggaggtcgc gcaggttctc gatgacggtc ggatcggggt ggtgattggg
     2821 aaaggtccca tccgagtcgc agaagagcgg aatgacgtcg gcgccgagtg cttccagggt
     2881 agagactgcg atgaggctgc caacgccgtt gccgcagtcg accaccacct tcaccggccg
     2941 gtgcagccgg tgccgggaga cgatcgcctc gcggtagcgg ccgaggatcg agccgtcggc
     3001 actgatgcgt ccctgaccgg tgcgccaggt ctcgagcgag atgatctcgt agaggtgctg
     3061 gacatcttct ccgtggatgg cttcaccggc gaggaccatc ttgaagccgt tgaactccgg
     3121 gggattgtgg gagccggtga cctggaggcc accgtcacag tcgagtgcgt ggaccgcaaa
     3181 atagagcgcc ggcgtgggca tctggccgac gtcgatggcg gttcccccgg cttcggcgat
     3241 gccttcccgg acctgggcgg agagggtgtc accggaaggg cggttgtcgc ggccaacggc
     3301 aatgatcggg gcccgctgga ggcgttccca gccgagggag gcaaaagcgc ggcccagggc
     3361 gcgcgcaaac gcgggggtca gctccgagcc gaccagcccg cggacatcgt actgacggaa
     3421 gatcgagcgt gggacgttca tggtgggagt tccaagttcc gagttccgag ttccgagtgg
     3481 taccactttg gtgtggcgcc gagagctcgg aactcggtta ggaactaaaa acacccctgc
     3541 cggcgaggca accgcagcgg ctagttgccg gcgacggact gggaagaggt caccggcagg
     3601 gaggcggccg cgttgtcgga gagatcgagg gccggcaccg gccagacgcc gagagcgaga
     3661 atgccgatga cggccagcgt cacggcgaca ccggcggtgc gggccaggcg cgagtcgtag
     3721 tagaccattg gcgccctggc cggccgcatg tacatcgaca tgaccaccgg cagatagtag
     3781 cccgccgaga tgacgctggt gaccacgagc aggatggcaa gcatcggctt gttggcggcg
     3841 atgatggcgc tgatgatgta ccacttcccg atgaagccca ccgtaccggg gaagcccagc
     3901 agcgagagca tc
//
LOCUS       DATIFF010000274         1224 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1114471, whole genome shotgun sequence.
ACCESSION   DATIFF010000274 DATIFF010000000
VERSION     DATIFF010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1114471"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..548
                     /locus_tag="VLD58_03980"
     CDS             <1..548
                     /locus_tag="VLD58_03980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional 5,10-methylene-tetrahydrofolate
                     dehydrogenase/5,10-methylene-tetrahydrofolate
                     cyclohydrolase"
                     /protein_id="HSB53485.1"
                     /translation="RIDPAKDVDGFHPVNVGKLVTGDKTAFRPATPYGVQQMLIRSGI
                     ETRGANAVIVGRSNIVGKPMANLLIQQGPGGNATVTICHSQTRDLPAVCRSADILIAA
                     IGKAEFVTRDMVRPGAVVIDVGINRVDDASKPKGYRLTGDVAYGPVAEIASAITPVPG
                     GVGPMTIAMLLVNTLQAVKQL"
     gene            668..>1224
                     /gene="xseA"
                     /locus_tag="VLD58_03985"
     CDS             668..>1224
                     /gene="xseA"
                     /locus_tag="VLD58_03985"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: protein motif:HMM:NF025118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HSB53486.1"
                     /translation="MDLFTPNPDAPWTPVQLARAARRVVEMGIGPIWVRGEITGLKAY
                     ASGHWYFTVSDRLAQIRCVMWRTYTQRLKTPPADGTQVYLLGTPTVWEERGEFRLNIT
                     QLLVTDRIGQQQLALERIREALSRDGLFDPSRKRPLPPHPATIAVVTSLEGAALRDII
                     TVSRKRWPSARLLLFGARVQGTEAEG"
BASE COUNT          199 a          440 c          401 g          184 t
ORIGIN      
        1 accggatcga cccggcgaag gacgtggacg ggtttcatcc ggtgaacgtc gggaagctgg
       61 tgacgggcga caagacggca ttccgccccg cgacccccta cggcgtgcag cagatgctga
      121 tccgctccgg gatcgagacg cgaggcgcca acgcggtgat cgtgggccgg tccaacatcg
      181 tcggcaagcc gatggcgaac ctgctgatcc agcaggggcc cggcggcaac gccaccgtca
      241 cgatctgtca ctcccagacc cgcgatctcc ccgccgtctg ccgctcggcc gacattctca
      301 tcgccgccat cggcaaggcg gagttcgtca cccgcgacat ggtgcggccc ggtgcggtcg
      361 tcatcgatgt cggcatcaat cgggtcgacg atgccagcaa gcccaagggc tatcgcctca
      421 ccggcgatgt ggcgtacggc ccggtcgccg agatcgcctc ggccatcact cctgtgcccg
      481 gcggagtggg gccgatgacc atcgcgatgc tgctggtgaa tacactgcag gcggtgaagc
      541 aactgtaggc ggggctggag gccggaggcc ggagcaactc cgagcgcgag acgcatccgt
      601 cacactcgcc gagtcaccgg ccaccggcct ccagcctccg gcccatcatc tctctacctt
      661 cccccacatg gatctcttca cccccaaccc cgacgccccc tggaccccgg tgcaactggc
      721 ccgggcggcc cggcgtgtgg tggagatggg gatcgggccg atctgggtcc ggggggagat
      781 caccgggctc aaggcctacg ccagcgggca ctggtatttc accgtctctg accgcctggc
      841 ccagatccgc tgcgtgatgt ggcggaccta cacccagcgg ctcaagactc cccccgccga
      901 cggcacccag gtgtatctcc tcggcacccc cacggtgtgg gaagagcggg gtgagttccg
      961 gctcaacatc acccagctgc tcgtcaccga ccggatcggg cagcagcagc tggcgctgga
     1021 gcggattcgt gaggcactct cccgcgacgg cctgttcgat cccagccgca aacggccgct
     1081 cccgccccat cccgcgacca tcgcggtggt gacgagtctc gaaggcgccg ctctccgcga
     1141 tatcatcacg gtgtcacgca aacgctggcc gtcggcccgg ctgctgctct tcggggcgcg
     1201 ggtgcagggc accgaggcgg aggg
//
LOCUS       DATIFF010000275         1886 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2190798, whole genome shotgun sequence.
ACCESSION   DATIFF010000275 DATIFF010000000
VERSION     DATIFF010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1886
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2190798"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1857)
                     /locus_tag="VLD58_03990"
     CDS             complement(<1..1857)
                     /locus_tag="VLD58_03990"
                     /inference="COORDINATES: protein motif:HMM:NF024627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HSB53487.1"
                     /translation="MSDRPTGAGAGQLELLLQDLNGTTLADHQRMMARLDRDEFARLF
                     AYLFLVGDPYHMDGVHNQLIYEDPSTQQLHPIPWDVRLLRLSEPEKPLSYLFQAVLRD
                     PFVVDATMRELGRRLADDGALRIADSLVRAAENRYAGYFAYDRLRQGLIPEVGDTATA
                     MAILRANAAYLRRWLANDTIAVQVSAAPGGYLVDLEARGMVGADLEGFTVDRAVAGRV
                     TLRLDSNRSGVPDAGDRLLALRSAGGGLQLDQPVPLYAAWDASQPSMRAGTQSYRLFV
                     AGLPAGVKLVPELKNRATGLPAATVAWEAGSPVPAGSGWHAWDFPERVPRAERYSGTV
                     RLHETVRIPAGDTLLIEPGTTLLLDPDVSVVSRGLVLAQGTAARPIRVLPSQPGVPWG
                     TFSLLGHGADSSRFSYVEFAQGGGALVDRIEFTGMVNVHWANDVRFEHGFFHDNLRSD
                     DTFHAMHSQVVVRESHFLRANSDAVDFDIAGGVVADNQFEQTGGDAIDLMTSTPRIFG
                     NRISGSGDKGISVGEASRPFIFDNLIDSCDIGVEIKDRSEAVLLHNRLTNNRIGMRER
                     RKNWRYGGGGWTTVAASVFAGNRTPLVRDPFSRLTLLDAVGLDSAGSAAVVAP"
BASE COUNT          305 a          671 c          641 g          269 t
ORIGIN      
        1 gggggcgacc accgcggcgc tcccggcgga atccaggccc accgcgtcca acagggtgag
       61 gcgggagaac ggatcgcgca ccagcggggt ccggttgccg gcgaacaccg acgcggccac
      121 ggtggtccag cctcccccgc cgtagcgcca gttcttccgc cgctcccgca tgccgatccg
      181 gttattggtg agccggttgt gcagcagcac cgcctcggag cgatccttga tctccacccc
      241 gatgtcgcag ctgtcgatca ggttgtcgaa gatgaacggc cggctcgctt cgcccaccga
      301 gatccccttg tcccccgacc cgctgatccg gttgccgaag atcctcggcg tggaggtcat
      361 gaggtcgatc gcgtcgccgc cggtctgttc aaactggttg tcggcgacca ctccgccggc
      421 gatatcgaaa tccacggcgt ccgagttggc ccgcaggaag tgcgactcgc gcaccaccac
      481 ctgcgagtgc atggcgtgga aggtgtcgtc gctccgcaaa ttgtcgtgga agaagccgtg
      541 ctcgaaccgc acatcgttgg cccagtgcac gttcaccatg ccggtgaact cgatccggtc
      601 caccagcgcg ccgcccccct gggcgaactc cacgtaggag aagcggctgc tgtccgcccc
      661 gtggcccagg agcgagaacg tgccccatgg cacgccgggc tgcgagggca gcacgcgaat
      721 cggccgggcc gcggtgccct gggccagtac caggccgcgc gataccaccg agacatccgg
      781 atcgaggagc agcgtcgtcc ccggctcgat gagcagcgtg tcccccgcag ggatccgtac
      841 ggtctcatgg agccgcaccg tgccggagta gcgctcggcc ctcggcacgc gctctgggaa
      901 atcccaggcg tgccagccgc tcccggccgg aaccggcgac ccggcctccc atgccacggt
      961 cgcagcaggc aaaccggtcg cgcggttctt cagctcgggg acgagcttga cccccgcggg
     1021 aaggccggca acgaacaacc ggtagctctg ggtaccggcg cgcatcgagg gctgggaggc
     1081 atcccaggcc gcgtacagcg gcaccggctg gtcgagctgg agcccgcccc ccgcggaacg
     1141 cagcgcgagc aggcgatcgc cggcgtcggg cacgcccgag cggttggagt ccagccggag
     1201 ggtcaccctc ccggcgactg cgcggtccac cgtgaaccct tcgaggtccg cgcccaccat
     1261 gccgcgcgcc tccaggtcca ccaggtaccc ccccggcgca gcagagacct ggaccgcgat
     1321 cgtgtcgttc gcgagccagc ggcggagata ggcggcattc gcccgcagga tcgccatggc
     1381 agtagcggtg tctcccacct cggggatcag gccctgccgc agccggtcgt aggcgaagta
     1441 gcctgcatag cggttctccg cggcccgtac aaggctgtcc gcaatccgga gggcgccatc
     1501 gtcggcgagg cggcggccca gctcgcgcat ggtggcatcc accacgaacg ggtcacgcag
     1561 caccgcctgg aacaggtagc tcaggggctt ctccggctcg ctcagacgga gcagccggac
     1621 gtcccacgga atcggatgga gctgctgggt ggaggggtcc tcgtagatga gctgattgtg
     1681 caccccatcc atgtggtatg ggtcgcccac gaggaagagg taggcgaaca gccgggcgaa
     1741 ctcgtcccga tccagccgag ccatcatccg ttgatggtcg gcgagggtgg tcccgttcag
     1801 gtcctgcagc agcagctcga gctgccccgc cccggcgccg gtcggccgat cactcacggc
     1861 cacgcggtcc cagaggtaag ggtcct
//
LOCUS       DATIFF010000276         3643 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2037632, whole genome shotgun sequence.
ACCESSION   DATIFF010000276 DATIFF010000000
VERSION     DATIFF010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3643
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2037632"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..425)
                     /locus_tag="VLD58_03995"
     CDS             complement(<1..425)
                     /locus_tag="VLD58_03995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53488.1"
                     /translation="MSTIQIIERPVRVAAGHLLLPGELSTPEHALGLVLFAHGSGSSR
                     LSPRNQAVARRLHAGGIGTLLFDLLTEAESRNRDNVFDIPLLANRLLAATDWIAGEPE
                     GKLRLGYFGASTGAGAALMAAADAADRIHAVVSRGGRPDL"
     gene            complement(572..2203)
                     /locus_tag="VLD58_04000"
     CDS             complement(572..2203)
                     /locus_tag="VLD58_04000"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB53489.1"
                     /translation="MATSLVRPGGAVPGTEKVNILLVDDQPGKLLAYEAMLAQLGENL
                     IKASSGREALEHLLKHDVTVVLMDVSMPEIDGFELAEMIRAHPRHQKTAIIFVSAVHL
                     TDLDKIKGYETGAVDYVSVPVIPELLRAKLSVFIELYRKRVESERLTTELERRVAART
                     AELEAAIAKQTELTAQLTAADRRKDEFLALLAHELRNPLAPVQNAVAIMQRKAIDDPD
                     LRWCRDVIERQTRQSARLVDDLLDVARVTQGKITLRQEPLALASIVHGAVETSRPLID
                     SRQHQLQLDLSPEPIWVRGDAARLTQVLANLLNNAAKFQDKGGRIELTVQASRGEAVV
                     RVRDHGAGMAPEMLREMFQLFVQGGRDSHASNSGLGIGLFLVRHLVELHAGSVEIHSD
                     GPGLGTECVVRLPLLDSPEPRRTPAPGLGAVDLRGRKVLVVDDNRDAAQSLALLLRLQ
                     GHEVTVAHDGPSAISRTTEQPPEVILLDLGLPGMDGYEVCRRLRRTGFTSTRIIAMTG
                     WGQERDRRRSEEAGFDSHTVKPVEIHQLERLLQLG"
     gene            complement(2188..>3643)
                     /locus_tag="VLD58_04005"
     CDS             complement(2188..>3643)
                     /locus_tag="VLD58_04005"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB53490.1"
                     /translation="AGTSRKYGGTGLGLAISRELAALLGGEIQLRSTPGVGSTFTLYI
                     PQAYAGPSVVPPGASVGRPNLAIGRTLVVAPRPEQVVERVPDDRSELRPGDPVLLIVE
                     DDTTYARLLAVEARAQGFKVLVAHRGDEALTLARDYHPTAVSLDVFLPDMLGWTVLNQ
                     LKQDPGLRHIPVQMVTLDEDRQHGLARGAFAFHSKPTTREGLQAALARIKEYSVPRNR
                     RLLVVEDNAAERLSIMALLEHDDVEIATASTGREALEALRTRAYDCAVLDLRLPDMSG
                     FEVLEEMRGDPELMDVPVVVFTGKALSPEEDARLHTLARSVVVKGVESPERLLDETAL
                     FLHRVIGDLPPDMQAMLDRLQRSDDDLVGRKVLVVDDDVRNIFALSSVLERRGMQVLT
                     AGTGHEAIETLAGTPDIAIVLMDIMMPEMDGYQTMQAIRQVPAFRRLPIVALTAKAMK
                     GDREKCLEAGASDYLAKPVNTEQLLSTLRLWLHR"
BASE COUNT          525 a         1233 c         1299 g          586 t
ORIGIN      
        1 aggtcgggcc ggccgccgcg ggaaaccacc gcgtgaatcc ggtcggcggc gtcggcggcg
       61 gccatcagcg ccgcgcccgc cccggtgctg gcgccgaagt accccaggcg cagctttcct
      121 tcgggctcgc cggcaatcca atcggtggcg gccagcagcc ggtttgccag gagcgggatg
      181 tcaaagacgt tgtcccgatt ccggctttct gcttcggtga gaaggtcgaa gagcagagtc
      241 ccgatcccgc cggcgtgcag ccgccgcgcc accgcctggt tgcgcggact caggcggctg
      301 ctgccgctcc catgggcaaa gaggaccagg ccgagggcgt gttccggggt gctgagctcg
      361 cctggcagga ggagatgccc ggccgcgact cgcaccgggc gttcgatgat ctggatggta
      421 gacatagtgg ctgctcccgt ccggccacct gacggagccg tcccactacg ggcgcggaag
      481 gaaagcggct ccgcgcggag gtgtccttgg tctacgatgc cgtggtgtcg ctgaagcggt
      541 gatgggagcc gggtgataac cggctcacga ttcaccccag ctgcagcagc cgttccagct
      601 ggtggatctc gaccggtttc accgtgtggc tgtcgaaccc cgcttcctca gagcggcgcc
      661 ggtcgcgctc ctggccccat ccggtcatcg cgatgatgcg ggtggaggtg aatccggtgc
      721 gtcgcagtcg gcggcagacc tcgtagccgt ccatgcccgg cagccccaga tcgaggagga
      781 tcacctcggg tggctgctcg gtcgtgcggc tgatcgcgct cggtccgtca tgggcgaccg
      841 tcacctcgtg cccctgaagc cggaggagga gcgcgaggct ctgggccgca tcacgattgt
      901 cgtccactac cagcaccttc cggccccgga gatcgacggc gccgagtcct ggcgcgggag
      961 tccggcgtgg ctcgggggag tcgaggaggg gcaggcggac cacgcactcg gtaccgagcc
     1021 cgggtccatc gctgtggatc tcgacgctgc cggcgtggag ctcgaccagg tggcgcacca
     1081 ggaagagccc gatcccgagg ccgctgttcg atgcgtggga gtcgcgcccg ccctggacga
     1141 agagctggaa catctcccgc agcatctccg gagccatccc ggcgccatga tcccggaccc
     1201 ggaccacggc ctcgccccgc gacgcctgca ccgtcagctc gatgcggcca cccttgtcct
     1261 ggaacttggc ggcgttgttg aggaggttgg ccaggacctg ggtgaggcgg gcggcgtcgc
     1321 cccggaccca gatcggctcc ggggacaggt cgagctgaag ctggtgctgc cgcgagtcga
     1381 tcaggggccg gctggtctcg accgccccgt ggacaatgga cgccagggcc aggggctcct
     1441 gccggagcgt gatcttcccc tgggtgacgc gggcgacatc gagcaggtcg tccaccagcc
     1501 gggccgattg ccgggtctgc cgctcgatca catcgcggca ccagcggagg tcggggtcgt
     1561 cgatcgcctt ccgctgcatg atggcgacgg cgttctgcac cggcgccagc gggttgcgga
     1621 gctcgtgcgc cagcagcgcc aggaactcgt ccttgcggcg gtcggcggcg gtgagctggg
     1681 cggtgagctc ggtctgcttc gcgatcgccg cttccagctc ggcggtgcgg gccgcgaccc
     1741 ggcgctccag ctcggtggtg agccgctccg attccacccg cttccggtag agctcgatga
     1801 agacgctgag cttggcccgc aggagttcgg ggatgaccgg caccgagaca tagtccaccg
     1861 ccccggtctc gtaccccttg atcttgtcga ggtccgtgag gtgcaccgcc gagacgaaga
     1921 tgatcgcggt cttctggtgc cgtgggtggg cccggatcat ctcggccagc tcgaacccgt
     1981 cgatctccgg catgctgacg tccatcagga cgacggtcac gtcgtgcttg agaagatgct
     2041 ccagcgcttc ccggccggag ctcgccttga tcaggttctc tcccagctgc gccagcatcg
     2101 cctcgtaggc caggagcttc cccggctggt cgtcgaccag caggatgttg accttctcgg
     2161 tgcccggcac ggcgccgccc gggcgcacta gcgatgtagc cataggcgaa gggtggagag
     2221 gagctgttcg gtgttgaccg gtttggccag gtagtccgag gcgcccgcct cgaggcactt
     2281 ctcgcggtcg cctttcatgg ccttggccgt gagggccacg atgggcaggc ggcggaaggc
     2341 gggcacctgg cggatcgcct gcatggtctg gtagccgtcc atctcgggca tcatgatgtc
     2401 catgagcacg atcgcgatgt cgggcgtgcc ggcgagggtc tcgatggcct cgtgcccggt
     2461 gccggcagtg agcacctgca tgccgcgccg ctccagcacg ctggagagcg cgaagatgtt
     2521 ccggacatcg tcgtccacca ccagcacctt ccgcccgacc aggtcgtcgt cggagcgctg
     2581 cagccggtcg agcatggcct gcatgtcggg cggcaggtcg ccgatcaccc ggtgcaggaa
     2641 gagcgcggtt tcgtcgagca gccgctcggg cgactcgacc cccttcacca cgacgctccg
     2701 ggccagggtg tgtagcctgg catcttcttc cggcgacagc gccttgccgg tgaagaccac
     2761 aaccggcacg tccatcagct ccgggtcgcc ccgcatctcc tccagcacct cgaagccgga
     2821 catgtcggga agccgcaggt cgagcaccgc acagtcgtag gcccgggtgc ggagcgcttc
     2881 cagcgcctcc cgcccggtgg acgcggtggc gatctccacg tcgtcatgct ccagcagcgc
     2941 catgatgctg agccgttcgg cggcgttgtc ctccaccacc agcaggcggc ggttccgggg
     3001 gaccgaatac tccttgatcc gggccagggc ggcctgcagc ccttcccggg tggtgggctt
     3061 ggaatggaag gcaaaggccc cccgggccag gccatgctgc cggtcctcgt ccagggtcac
     3121 catctgtacc gggatgtggc ggaggccggg gtcctgcttg agctgattga ggacggtcca
     3181 gccgagcatg tcgggcagga atacgtcgag cgagaccgcg gtcgggtgat aatcacgggc
     3241 cagggtgagc gcttcgtccc cccggtgcgc caccagcacc ttgaatccct gggcccgggc
     3301 ctcgacggcc agcagccggg cataagtggt gtcgtcctcc acgatcagga gcaccgggtc
     3361 gccggggcgg agttcggacc ggtcatccgg cacccgctcc accacctgct cgggacgagg
     3421 ggcaaccacg agggtccgcc cgatcgcaag gttggggcgg cccaccgagg cgccaggcgg
     3481 gaccaccgag ggcccggcat acgcctgcgg gatatacagg gtgaaggtgc tgccgacgcc
     3541 cggcgtgctg cgcagctgaa tctccccgcc cagcagtgcg gccagctccc ggctgatggc
     3601 gagccccagg ccggtgccgc cgtacttgcg gctggtgccg gcg
//
LOCUS       DATIFF010000277         1124 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1575229, whole genome shotgun sequence.
ACCESSION   DATIFF010000277 DATIFF010000000
VERSION     DATIFF010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1575229"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..217
                     /locus_tag="VLD58_04010"
     CDS             <1..217
                     /locus_tag="VLD58_04010"
                     /inference="COORDINATES: protein motif:HMM:NF024183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HSB53491.1"
                     /translation="PAFELAESDEDAATSTQCAYCGGSLPTNRKVNFCPHCGQPPLGE
                     LKCPACGSEVDVGWAYCIGCGRATGFE"
     gene            287..>1124
                     /locus_tag="VLD58_04015"
     CDS             287..>1124
                     /locus_tag="VLD58_04015"
                     /inference="COORDINATES: protein motif:HMM:NF012407.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HSB53492.1"
                     /translation="MTSHQIAVIVGDGIGPEVIEAAIPVLDRAAAAHGFSLDWERLPY
                     SADHYLATGETLPDTAFAHLRDDVDAIFLGALGDPRIPGNEHARDILLGLRFRLDLYI
                     NFRPVQLLHPDLTPLRAGGRIDFVIFRENTEGVYLGRGRISGDEYIAEEVNTAKGVDR
                     IIRAAFAWAKDHGKTRVTMSDKSNAVPAHRIWQERFKAVAAEHPGIQTEHRFVDALAM
                     EMVREPERFQVIVTNNLYGDILSDLGAGLVGGLGIAASANLHPGRAGLFEPVHGSAPP
                     LKG"
BASE COUNT          189 a          390 c          373 g          172 t
ORIGIN      
        1 gccggcgttc gagctggcgg agtcggacga ggatgccgcg acctccacac agtgcgcata
       61 ctgcggcggc tcgctgccca cgaaccgcaa ggtcaacttc tgcccccact gcggccagcc
      121 gcccctgggc gagctgaagt gtccggcatg cggcagcgag gtggatgtgg gctgggcgta
      181 ctgtatcgga tgcgggcgag cgacggggtt tgaatgagcg acgttctcgg gcgtcggtca
      241 tcggtgttcg gtaccggcca aaccgaggac cgatgaccga acaccgatga cgtctcacca
      301 gatcgccgtc atcgtgggcg acggtatcgg ccccgaggtg atcgaggctg cgatccccgt
      361 gctcgaccgg gccgctgcgg cgcacggctt ctcgctcgac tgggagcgac ttccctactc
      421 cgccgatcac tacctcgcga ccggcgagac cctccccgac acggccttcg cccacctgcg
      481 cgacgacgtg gatgccatct tcctcggcgc cctcggcgat cccagaatcc ccggcaacga
      541 gcacgcccgg gacatcctgt tgggactgcg gttccggctc gatctctata tcaacttccg
      601 gccggtgcag ctgctccacc ccgacctcac cccgctccgg gcgggcgggc ggatcgactt
      661 cgtaatcttc cgggagaaca ccgaaggggt ctacctcggc cgagggcgta tctcgggcga
      721 cgagtatatc gccgaagagg tcaataccgc gaagggcgtg gaccgcatca tccgggccgc
      781 cttcgcctgg gccaaggacc acggcaagac ccgcgtgacg atgagcgaca aatcgaacgc
      841 ggtgccagct caccgcatct ggcaggaacg attcaaggcg gtcgcggccg aacaccccgg
      901 catccagacc gagcaccgct tcgtcgacgc cctggcgatg gaaatggtgc gcgagccgga
      961 gcggttccag gtcatcgtca ccaacaacct ctacggtgac atcctctccg atctgggcgc
     1021 ggggctggtc ggcgggctgg ggatcgcggc gagcgcgaac ctgcaccccg gccgcgcggg
     1081 cctgttcgag ccggtgcacg gatcggcgcc gccgctcaag ggca
//
LOCUS       DATIFF010000278         4399 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_805908, whole genome shotgun sequence.
ACCESSION   DATIFF010000278 DATIFF010000000
VERSION     DATIFF010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4399)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4399)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4399
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_805908"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1242
                     /locus_tag="VLD58_04020"
     CDS             <1..1242
                     /locus_tag="VLD58_04020"
                     /inference="COORDINATES: protein motif:HMM:NF005453.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HSB53493.1"
                     /translation="PMHWMVKWAGGFPLFVAEGRGAWFTDVDGRRYLDLCLGDTGAMT
                     GHAPAATVAAVQRQAARGFTFMLPSEDHLWVAEELTRRFGLPCWQFAMSATDANRFAI
                     RLARMLTGRPRILVFNWCYHGTVDETFATLVDGRVEPRSGNIGPPVHPAETTRVVEFN
                     DVAALEAALAHGDVACVLAEPAMTNIGIIHPDPGFHEALRALTRKHQSLLIIDETHTI
                     CAGPGGYTRAHGLEPDMLTLGKPLAGGVPAAIYGFSAEVVERLKGRIALADSDTGGIG
                     GTLAGNAFALAAMRATLEQVLTEESYARTVPLAERFQAGVEGVIAEFRLPWIVKRLGC
                     RAEYWFRPSAPRNGGEAAAATDLELDRFMHLFALNRGILLTPFHNMALIAPDTTEADI
                     DRHTAVFREAVVALTAGAPRS"
     gene            1239..2363
                     /locus_tag="VLD58_04025"
     CDS             1239..2363
                     /locus_tag="VLD58_04025"
                     /inference="COORDINATES: protein motif:HMM:TIGR01187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB53494.1"
                     /translation="MSAPASEAPIVQFSRVSKSFGEVKAVNDISFGIARGEFFSLLGP
                     SGCGKTTTLRILAGFEEPDRDGGEVRIANEVVNRKRPYERQIGMVFQNYAIFPHLSVE
                     KNVAFGLEQHRVPRAEIPERVTRALEMVRLDPVTFARRMPNQLSGGQRQRVALARALV
                     LRPAILLLDEPLGAIDLKLRKEMQLELKQLNKRLGITFVYVTHDQEEALTMSDRIAVM
                     DNGRVAQLGTPAEIYENPRTAFVAKFIGESNFFAGKAVKRQGGKWEVSGPLGGFALPD
                     SAGVTDGAEVRIAVRPEWMDLFSPGQVPAGENAILGTVREVIYLGEVLHVIVTLADGS
                     DCTVALRNEGQLIKPLHWKQGDRAAVAWLPEDCQVLEADA"
     gene            2360..3250
                     /locus_tag="VLD58_04030"
     CDS             2360..3250
                     /locus_tag="VLD58_04030"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB53495.1"
                     /translation="MTLRQRCLRFLHQRPTLQAWSLLAPGTAWLLVFFLVPILIMFVY
                     SLMLRGVYGGVERGWTLAHYQRFFDPLYLQILNRTLVWSVAATVICLLMGYPVAYLIA
                     RSGKWKNLLLFLVVLPFWTSFLVRTFAMIFLLRDTGFINTLLLSAGLIDQPLAMLYTP
                     FAVMSGLVYGFLPFMILPVYASLEKLDFSFLEAAEVLGARPLARFLRVTLPLSLPGVV
                     AGCLLVFIPALGSFLTSDLLGGAKQVMIGNLIQNQFSAARNWPFGSAASFIVMALVLV
                     AVVIYLRVRDRAPGGAGGML"
     gene            3247..4026
                     /locus_tag="VLD58_04035"
     CDS             3247..4026
                     /locus_tag="VLD58_04035"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB53496.1"
                     /translation="MKLPRWLVGFTALVYFLLHLPIAVLVIFSFNDSKYGVSWVGFTL
                     GWYRRLLEREDILDGLRSSLIVGVVATLVSALFGTLIALAVARHRFRGRTAIEAFLYV
                     PLVTPEIVVGISLLILFVLLGLPLGLTTITIAHIAFSISFVVVVVLARLQGMDRNLEE
                     AAMTLGADEITTFWKITVPLLWPGIVSGSLLAFTMSFDDFVITSFVSGTGSSTLPIVV
                     YGMVRKNIEPSINAISTIILVATSGLIYLADRLGREPGQAR"
     gene            4119..>4399
                     /locus_tag="VLD58_04040"
     CDS             4119..>4399
                     /locus_tag="VLD58_04040"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HSB53497.1"
                     /translation="MHRDTQILQAGFPDPHTPGAFLPGPQFASTFVSPGDPSAHQFTY
                     GRFNNPTWTAWENALEVLEGGPSLAFPSGMAACAAIFGVTLKPGDVVVLP"
BASE COUNT          620 a         1521 c         1448 g          810 t
ORIGIN      
        1 cccatgcact ggatggtgaa gtgggccggc ggctttccgc tcttcgtcgc ggagggccgc
       61 ggcgcctggt tcaccgatgt cgacggccgg cgctatctcg acctctgtct cggcgatacc
      121 ggcgcgatga cgggccatgc gcccgcggcg acggttgcgg cggtgcagcg gcaggcggct
      181 cgcggcttca ccttcatgct gccctccgag gatcacctgt gggtggccga ggagctgacc
      241 cgccgcttcg ggcttccctg ctggcagttc gccatgagcg ccaccgacgc caaccgcttt
      301 gccatccggc tcgcccggat gctcaccggc cggcccagga tcctggtctt caactggtgt
      361 tatcacggca cggtggacga gaccttcgcc acgctggtcg atgggcgggt cgagccgcgc
      421 tccggcaaca tcggcccgcc ggtgcatccg gcggagacca cccgggtggt ggagttcaac
      481 gatgtcgccg cgctcgaggc cgcgctggca cacggcgacg tggcctgcgt cctggccgag
      541 cccgcgatga ccaacatcgg gatcattcat cccgatcccg gttttcatga ggcgctccgg
      601 gcgctcaccc ggaagcacca gagtctcctc atcatcgacg agacccacac catctgcgcc
      661 gggccgggcg gctacacccg ggcccacggc ctcgagcccg acatgctcac gctgggcaag
      721 ccgctcgccg gtggtgtgcc ggcggcgatc tacgggttct ctgccgaggt ggtcgagcgg
      781 ctcaaggggc gaatcgccct ggccgactcc gacaccgggg gcatcggcgg aacgctcgcc
      841 ggcaatgcct ttgcgctcgc cgcgatgcgc gcgacgctcg agcaggtgct gaccgaggag
      901 agctatgccc gcacggtgcc gctcgccgaa cggttccagg cgggggtcga gggagtgatc
      961 gccgaattcc ggctgccctg gatcgtgaag cggctcggct gccgggccga gtactggttc
     1021 cgcccctcgg cccccaggaa cgggggcgag gcggccgcgg cgaccgatct cgaactcgac
     1081 cggttcatgc acctcttcgc gctcaaccgc ggcatcctgc tcacgccctt ccacaacatg
     1141 gccctcatcg ctcccgacac caccgaagcg gacatcgacc ggcacaccgc ggtgttccgt
     1201 gaggcggtgg tggcgctcac ggccggagca ccgcgctcgt gagcgctcct gccagcgaag
     1261 cgccgatcgt ccagttttcc cgggtcagca agtcctttgg cgaagtgaag gcggtcaacg
     1321 atatcagctt cggtatcgcc cggggcgagt tcttctcgct gctcggcccc tccggctgcg
     1381 gcaagaccac gacgctccgc atcctcgccg gcttcgagga gccggaccgg gacggcggcg
     1441 aagtccggat cgcgaacgag gtggtgaacc gcaagcggcc ctacgagcgc cagatcggga
     1501 tggtgttcca gaactacgcc atctttccgc acctctcggt cgagaagaac gtggccttcg
     1561 gcctggagca gcaccgggtg cccagggcgg agattcccga acgggtcacc agggcgctcg
     1621 agatggtgcg gctcgatccg gtcaccttcg cccggcggat gccgaaccag ctgagcggcg
     1681 gccagcgcca gcgggtggcg ctggccaggg cgctggtgct ccgcccggcc attctcctcc
     1741 tcgacgagcc gctcggcgcg atcgatctca agctccgcaa ggagatgcag ctcgagctca
     1801 agcagctcaa caagcggctt ggcatcacct tcgtgtacgt cacccacgac caggaagaag
     1861 cgctgacgat gtccgaccgg atcgcggtca tggacaacgg ccgggtggcc cagctcggga
     1921 cgccggcgga gatctacgag aatccccgga cggcgttcgt ggcgaagttc atcggggagt
     1981 cgaatttctt cgccggcaag gcggtaaagc gccagggcgg caagtgggag gtgagcgggc
     2041 cgctcggcgg attcgccctg ccggacagcg cgggagtgac ggacggtgcc gaagtccgca
     2101 tcgcggtgcg gcccgagtgg atggacctct tctcacccgg ccaggtgccc gcgggcgaga
     2161 atgcgatcct cgggaccgtg cgcgaagtga tctacctcgg cgaggtcctc catgtcatcg
     2221 tcaccctcgc cgacgggagc gactgcaccg tggcgctccg caacgagggc cagctgatca
     2281 agccgctcca ctggaaacag ggcgaccggg ccgcggtggc gtggctgccg gaggattgcc
     2341 aggtgctgga ggcggatgca tgaccctccg ccagcgttgt ctccggttcc tgcaccagcg
     2401 gcccaccctc caggcctggt cgctgctcgc ccccggcacc gcctggctcc tggtgttctt
     2461 cctggtcccc atcctgatca tgttcgtcta cagcctcatg ctgcggggcg tgtatggcgg
     2521 ggtggaacgg gggtggaccc tggcgcacta tcagcggttc ttcgacccgc tctatctcca
     2581 gatcctcaac cgcacgctgg tatggtcggt ggccgcgacg gtcatctgcc tcctcatggg
     2641 ctatccggtc gcgtacctga tcgcccggag cgggaagtgg aagaacctgc tcctcttcct
     2701 ggtggtgctg ccgttctgga ccagcttcct ggtccggacc ttcgccatga tcttcctgct
     2761 ccgcgacacc ggcttcatca acacgctgct gctctccgcc gggctgatcg accagccgct
     2821 cgcgatgctg tacaccccct tcgcggtgat gagcggtctg gtgtacggct tcctcccgtt
     2881 catgatcctg ccggtctacg cctcgctcga gaagctcgac ttctcgttcc tcgaggcggc
     2941 cgaggtgctg ggcgcgaggc cgctggcgcg gtttctccgg gtcacgctgc cgttgtccct
     3001 gccgggggtg gtggccggct gcctgctggt gttcatcccc gcgctcggca gcttcctgac
     3061 ctcggacctg ctgggaggtg ccaagcaggt gatgatcggc aacctgatcc agaatcagtt
     3121 ctccgccgcc cgcaactggc ccttcggctc cgccgcctcg ttcatcgtga tggcgctggt
     3181 gctggtcgcg gtggtgatct atctccgggt gcgcgaccgg gcgcccggcg gcgcgggagg
     3241 gatgctgtga aactcccccg ctggctggtc ggcttcaccg cgctggtcta cttcctcctg
     3301 cacctgccca tcgcggtgct ggtgatcttc tcgttcaacg actcgaagta cggcgtgagc
     3361 tgggtcgggt tcacgctggg atggtaccgg cggctgctgg agcgggaaga catcctcgac
     3421 gggctccggt cgagcctcat cgtgggcgtg gtggcgaccc tggtctcggc cctgttcggc
     3481 accctgatcg cgctggccgt ggcgcggcac cgcttccgcg gacgcaccgc gatcgaggcc
     3541 tttctctatg tgccgctggt gaccccggaa atcgtggtgg ggatctcgct cctgattctc
     3601 ttcgtgctcc tcggccttcc gctgggactc acgacgatca ccatcgccca catcgcgttc
     3661 tccatctcgt tcgtggtggt ggtggtgctg gcccggctcc aggggatgga caggaatctc
     3721 gaggaagccg ccatgaccct cggcgccgac gagatcacga ccttctggaa gatcaccgtg
     3781 ccgcttctct ggccggggat cgtctccggc tcgctgctcg cgttcaccat gtcgttcgac
     3841 gacttcgtga tcacctcctt cgtgtcgggg accgggtcgt ccaccctgcc gatcgtggtg
     3901 tacggcatgg tgcggaagaa catcgagccc agcatcaacg ccatcagcac gatcatcctg
     3961 gtggcgacct ccgggctcat ctacctggcc gaccgtctcg gccgcgaacc cggtcaggcg
     4021 aggtagcgat gggcattggc accccgacag tggatattgt ccatggtgtg ccttagcgcc
     4081 ctggttttgg gccctctcaa cttttcgcca cgatcttcat gcaccgcgat acccagattc
     4141 tccaggccgg cttccccgat ccgcacacgc cgggtgcctt ccttccagga ccccagttcg
     4201 cctccacctt cgtctctccc ggcgatccct cggcccatca attcacctat gggcgcttca
     4261 acaatccgac ctggacggcc tgggagaatg cgctggaggt gctggaaggc ggtccctcgc
     4321 tggcgtttcc ctccgggatg gcggcgtgcg ccgcgatctt cggcgtgacg ctcaagcccg
     4381 gcgacgtcgt ggtgctgcc
//
LOCUS       DATIFF010000279         1076 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_37995, whole genome shotgun sequence.
ACCESSION   DATIFF010000279 DATIFF010000000
VERSION     DATIFF010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37995"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..495)
                     /locus_tag="VLD58_04045"
     CDS             complement(<1..495)
                     /locus_tag="VLD58_04045"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HSB53498.1"
                     /translation="MPPANVVAPSQPTPDQWGERLPRRLGLLSAIAVVIGSTIGSGIY
                     RTPAVIAQRVPEPLAMLGIWVLAGGLVLCGALTYAELAAMYPRSGGVLVFLREGFGKL
                     PAFLFGWTNLVIIRASSLGAIATVFAEYLLRSLGVNPELPANVALVHYVAAAAIALNT
                     VVSIR"
     gene            731..>1076
                     /locus_tag="VLD58_04050"
     CDS             731..>1076
                     /locus_tag="VLD58_04050"
                     /inference="COORDINATES: protein motif:HMM:NF014809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II transmembrane
                     domain-containing protein"
                     /protein_id="HSB53499.1"
                     /translation="MHWWFPANASSYGGDVDRIFYVILYITGAVFLLVEGGLLVFLVR
                     YRRRDGRTASYIHGNNRAEIIWTTIPAVIVISLALLSQRVWSAVKDPAHFPKDAIPIG
                     VHVKQFEWQITMP"
BASE COUNT          171 a          396 c          354 g          155 t
ORIGIN      
        1 ccggatgctc accaccgtgt tcaaggcgat ggccgccgcc gccacgtagt gcaccaacgc
       61 cacgttcgcc ggcagctcgg gattcacccc cagcgagcgc agcaggtact cggcgaagac
      121 cgtcgcgatc gcgccgaggg acgaggcccg gatgatgacg aggttggtcc atccgaagag
      181 gaacgccggg agcttcccga acccctcccg gaggaatacc agcaccccgc cgctccgcgg
      241 gtacatcgcc gccagctcgg cgtaggtcag cgccccgcac aggaccagtc cgccggccag
      301 cacccagatg cccagcatcg ccaggggctc cggcacccgc tgggcgatca ccgccggcgt
      361 ccggtagatc ccgctcccga tcgtcgagcc gatgaccacc gcgatcgcgg agaggaggcc
      421 gagacgccgg ggcagacgct cgccccactg gtcgggcgtg ggctgggacg gggcgacgac
      481 gttcgcggga ggcatccgcc aagataacgc tcggccgcgg accgacacca ccggcggcag
      541 cgcgcctccg gcggggggcg ctgccgaggc ttccgcctcg ccgcccggga cccttctccc
      601 gcctctcccg gagcggcctc ccggtacccc cttcaattga gaaccgttct cattagattc
      661 ccgccgcgca tcagccccaa gagcgggttc gtccccctct ccggtcgtgg tcccgacgcg
      721 gagcacgtgc atgcactggt ggttcccggc caatgcctcg agttacggcg gtgacgtgga
      781 ccggatcttc tacgtcatcc tgtacatcac cggcgcggtc ttcctgctgg tcgagggggg
      841 gctgctcgtg tttctcgtgc ggtaccgccg ccgcgatggc cggaccgcca gctacatcca
      901 cgggaacaac agggcggaga tcatctggac gacgatcccc gccgtgatcg tgatctccct
      961 ggcgctcctc agccagcgcg tctggtcggc ggtgaaggac ccggcgcact tcccgaagga
     1021 cgcgatcccg atcggcgtgc acgtgaagca gttcgagtgg cagatcacga tgccgg
//
LOCUS       DATIFF010000280         1532 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2038234, whole genome shotgun sequence.
ACCESSION   DATIFF010000280 DATIFF010000000
VERSION     DATIFF010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2038234"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(77..>1532)
                     /locus_tag="VLD58_04055"
     CDS             complement(77..>1532)
                     /locus_tag="VLD58_04055"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSB53500.1"
                     /translation="DRTFQTDVPARLDRLPWSRWQWLVVAALGITWIIDGLEVTLIGA
                     VSGVLQEPQSLHFTGTQIGLLGTAYLTGAVLGALVFGYLTDRLGRKKLFTITLGLYLV
                     AAFLTAFSWDFRSFAAFRFLTGAAIGGEYSAINSAIDELIPARVRGWADLAINGTFWV
                     GAAAGSLASIVLLDPMLFPVDLGWRLGFGLGAALGLVIIFLRHHVPESPRWLLTHGHP
                     EEADRVVAEIERQIGRDPGRGPLPAAEGTITIRPRGGIGFGELARTMLRTYPGRTVLG
                     LALIISQAFLYNGVFFTFALVLRNFYGVPPDRTGYYLLPFTLSNFLGPLLLGRAFDTI
                     GRKPMIGGTYTASALLLALTGYLFTEGILTAATQTILWALIFFFASAAASSAYLTVSE
                     IFPVELRGMVIALFFAVGTTLGGTLAPWLFGRLIDTGSRVYLFYGNLFAAALLMLTVA
                     VVALFGVKAERTSLEEIAEPLSAVGKAEGAGAFS"
BASE COUNT          275 a          515 c          549 g          193 t
ORIGIN      
        1 ggcttccgca ggcgagataa gatgctcggc gcggcgatcg agcgtctgcg gcagttgcag
       61 ttgctcgctt cagcactcag gaaaacgcgc ctgcgccctc ggccttgccg accgccgaca
      121 acggctcggc gatctcctcg agcgaggtcc gctcggcctt gaccccgaac agcgccacga
      181 ccgccacggt cagcatcagc agtgccgccg cgaacaggtt cccatagaag aggtagaccc
      241 gcgagccggt gtcgatcagg cggccgaaca gccacggggc cagggtcccg cccagcgtgg
      301 tgccgacggc gaagaacagg gcgatgacca tgccgcgcag ctcgaccggg aagatctcac
      361 tgacggtcag gtacgccgag ctggcggcgg ccgaggcgaa gaagaagatg agggcccaca
      421 ggatggtctg ggtggcggcg gtcagtatcc cttccgtaaa caggtagccg gtgagggcca
      481 gcagcagcgc ggaggccgtg taggtcccgc cgatcatcgg cttgcggccg atcgtgtcga
      541 aggcccgccc cagcagcagc ggccccagga agttgctgag cgtgaacggc agcaggtaat
      601 agcccgtgcg atcggggggg acgccgtaga aattgcggag caccagggcg aaggtgaaga
      661 agacgccgtt gtacaggaag gcctgcgaga tgatcagggc caggccgagc acggtgcgcc
      721 ccgggtacgt gcgcaacatg gtccgggcca gttccccgaa tccgatgccg ccgcgcggcc
      781 ggatggtgat cgtgccctcc gccgccggga gcggcccccg acccgggtcg cgcccgatct
      841 gccgctcgat ctccgccacc acccgatcgg cctcctcggg atggccgtgg gtcaggagcc
      901 agcgggggct ctcgggcacg tggtggcgca ggaagatgat gaccaggccc agcgccgcgc
      961 cgaggccgaa tcccagccgc cagcccaggt ccaccgggaa gagcatgggg tcgagcagca
     1021 cgatgctcgc cagcgagccg gcggcggctc ccacccagaa ggtgccgttg atcgccaggt
     1081 cggcccagcc gcgcacccgc gcggggatca gctcgtcgat ggccgagttg atcgccgagt
     1141 attcgccgcc gatcgcggcc ccggtgagga agcggaaggc cgcgaagctc cggaagtccc
     1201 acgagaacgc cgtcaggaag gcggccacca ggtacaggcc gagcgtgatg gtgaacagct
     1261 tcttgcgccc cagccggtcg gtcaggtagc cgaagaccag cgcgccgagg actgcccccg
     1321 tcaggtaggc cgtgcccagc aggccgatct gggtgccggt gaagtggagg ctctgcggct
     1381 cctgcaggac cccgctgacg gcgccgatca gcgtcacttc cagcccgtcg atgatccagg
     1441 taatccccaa cgcggccacc accagccact gccagcggct ccatggcagg cggtccaggc
     1501 gcgcggggac gtcggtctgg aaggtccgat cg
//
LOCUS       DATIFF010000281         1272 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_806443, whole genome shotgun sequence.
ACCESSION   DATIFF010000281 DATIFF010000000
VERSION     DATIFF010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1272
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_806443"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..495)
                     /locus_tag="VLD58_04060"
     CDS             complement(<1..495)
                     /locus_tag="VLD58_04060"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HSB53501.1"
                     /translation="MGEFRMPTLGADMVAGTLTEWYKHPGDAIHRGDIIAAVDTDKGS
                     IDVEVFEDGVLERLVVQEGQKVPVGTLLAVIHSTDGASAAPAPTVAPEQPALPAPAVA
                     AAVAAPPTEPETHGPRLRVSPLARRLAAEKGIDLATIHGSGEGGTILREDVEAAANAV
                     AGAAV"
     gene            complement(526..>1272)
                     /locus_tag="VLD58_04065"
     CDS             complement(526..>1272)
                     /locus_tag="VLD58_04065"
                     /inference="COORDINATES: protein motif:HMM:NF014799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HSB53502.1"
                     /translation="VNFSLLALDQVVNTAALLRHMSGGQLGVPLVVRMATGAGRQVAA
                     QHSHSLEGWYAHIPGISVVAPATAHDARWMLPAALTQPDPVFIFEHAMLYPEEGEVGE
                     APGPLSLFQAAIRRPGRDVTLIAHGGSVGKALAAAEQLATEGIEAEVIDLRSLRPLDD
                     ATILASVRRCHRVVVIDEGWRSGSLAAEIGSRIAEAAFFDLDAPVARVCSAEVPIPYP
                     KHLEDAALPQVDRICAAVRATLKPVAVASV"
BASE COUNT          192 a          473 c          417 g          190 t
ORIGIN      
        1 caccgcggcg ccagccaccg cattcgctgc agcctcgacg tcttcgcgga ggatcgtccc
       61 cccttctccc gagccgtgga ttgtggcgag atcgatgccc ttctccgctg ccagccggcg
      121 agccagcgga gagaccctga gccgcggtcc gtgggtctcc ggctcggtgg gtggcgccgc
      181 gacagcggcc gcaacggccg gggccggaag agctggctgt tcgggggcca ccgtaggggc
      241 cggggccgcg gacgctccgt ctgtcgaatg gatcaccgcc aggagcgtac cgaccggaac
      301 cttctgtccc tcctgcacca ccaaccgctc gagcacaccg tcctcgaaga cctcgacgtc
      361 gatcgaaccc ttgtcggtat cgaccgcggc gatgatgtcg ccgcgatgga tcgcgtctcc
      421 cgggtgtttg taccactcgg tgagggtccc tgccaccata tccgcgccga gcgtcggcat
      481 ccggaactcg cccatcgggg ctacctctct tcctctgcca gacgttcaga cgctcgcgac
      541 cgccaccggc ttgagggtgg cgcggaccgc ggcgcagatc cggtcgacct gcggcaacgc
      601 cgcatcttcc agatgcttgg gatacggaat ggggacctcg gcgctgcaca cccgcgccac
      661 cggtgcgtcg agatcgaaga aggcggcctc ggcaatccgg ctgccgatct ccgccgccag
      721 actcccgctg cgccagccct catcgatcac caccacccga tgacaccggc gcaccgaagc
      781 cagaatggtg gcgtcgtcca gcggccggag actccgcaga tctatgacct cggcctcgat
      841 gccttcggtg gcgagctgct ccgcggccgc gagggccttc cccaccgacc cgccgtgcgc
      901 gatcagggtg acgtcccggc ccggacgacg gatcgccgcc tggaagagcg agagtggtcc
      961 gggcgcctcg cccacctccc cttcctcggg atagagcatc gcgtgctcga agatgaacac
     1021 cgggtccggc tgggtgagcg cggcggggag catccagcgg gcgtcgtgcg ccgtggccgg
     1081 cgccaccaca ctgatgccgg gaatgtgggc gtaccatccc tcgaggctgt gcgagtgctg
     1141 ggccgcaacc tgccgcccgg cgcccgtcgc catccgcacc accagcggca cacccagttg
     1201 cccgcccgac atgtgccgga gcagcgcggc ggtattcacc acctggtcca gcgccagcag
     1261 gctgaagttg ac
//
LOCUS       DATIFF010000282         1399 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1575828, whole genome shotgun sequence.
ACCESSION   DATIFF010000282 DATIFF010000000
VERSION     DATIFF010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1399)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1399)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1399
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1575828"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1399)
                     /locus_tag="VLD58_04070"
     CDS             complement(<1..>1399)
                     /locus_tag="VLD58_04070"
                     /inference="COORDINATES: protein motif:HMM:NF019353.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="error-prone DNA polymerase"
                     /protein_id="HSB53503.1"
                     /translation="RGSAANSAVCYCLGITAIDPVRMGLLFERFLSRERAEPPDIDLD
                     IMHERREEVIQHVYEKYGRDHAAMVANVIRYRARSAVRDVGKALGLPETALARLTKLL
                     SRSSEIAPAVLAQAGLDPEAPAHRHLRELATELCDFPRHLSIHPGGFLLGHEPVIDLV
                     PVENATMPGRTVIQWDKTDIEALGLFKVDLLGLGALSHLDRCFRLLAKHRGIAYSMAT
                     LPPDDPATFAMISRADTVGVFQIESRAQMAMLPRLRPRQFYDLVIEVSIIRPGPITGG
                     MVHPYLRRRRNEESVVYPHPSLIPVLQKTLGVPLFQEQVIRVAMVAADYTPGEADLLR
                     RDMAAWRRSGRIEQHRERLVSRMVAKGIAPEFAERVFQQIRGFGEYGFPESHAASFAL
                     ISYATAWLKCHHPAEFTCALLNAQPMGFYAPSTIVEDARRHAVEVRPVDAQASDWDCT
                     LELAPIRRNMGTTKAP"
BASE COUNT          209 a          468 c          511 g          211 t
ORIGIN      
        1 tggtgccttg gtggtgccca tatttcttcg gattggagct agttccagcg tgcagtccca
       61 gtcgctcgcc tgggcgtcca cggggcggac ctcgacggcg tggcgccgcg cgtcctccac
      121 gatggtggac ggcgcgtaga accccatcgg ctgcgcgttc aggagcgcgc aggtgaactc
      181 cgccgggtga tggcacttga gccaggcggt ggcgtagctg atgagggcga agctggcggc
      241 atggctctcc gggaacccat attcgccgaa gccgcggatc tgctggaaca cccgctcggc
      301 gaactccggc gcaatcccct tcgccaccat gcgcgagacg agccgctccc ggtgctgctc
      361 gatgcggccg ctccggcgcc acgccgccat gtcgcgccgg agcaggtccg cctcgccggg
      421 ggtgtagtcg gccgccacca tcgccacgcg gatgacctgc tcctggaaca ggggcacgcc
      481 cagcgtcttc tggaggaccg ggatcaggct ggggtgcggg tacaccaccg actcctcgtt
      541 ccggcggcgg cggaggtagg ggtgcaccat cccgccggtg atgggccccg gccggatgat
      601 gctcacctcg atcaccaggt cgtagaactg ccgcgggcgc aggcggggga gcatggccat
      661 ctgggcgcgg ctctcgatct ggaagacccc cacggtgtcg gcgcgggaga tcatggcgaa
      721 cgtcgccggg tcgtccggcg ggagggtggc catggagtag gcgatgccgc gatgcttcgc
      781 gaggagacga aaacagcgat ccaggtggga gagcgcgccc aggcccagca ggtccacctt
      841 gaacagcccc agcgcctcga tgtccgtctt gtcccactgg atgacggtcc ggcccggcat
      901 cgtcgcgttc tcgacgggca ccaggtcgat caccggctcg tgccccagca ggaacccgcc
      961 ggggtggatc gagaggtggc gcgggaaatc gcacagctcc gtggccagct cgcgaagatg
     1021 ccggtgcgcg ggggcctcgg ggtccagccc cgcctgggcg agcacggcgg gcgcgatctc
     1081 gctggagcgg gacaggagct tggtcaaccg ggcgagcgcg gtttccggca ggccgagcgc
     1141 ctttcccacg tcgcgcaccg ccgagcgggc gcggtagcgg atgacgttgg cgaccatggc
     1201 ggcgtggtct cgcccgtact tttcatacac gtgctggatc acctcctcgc gccgctcgtg
     1261 cataatgtcg aggtcgatgt ccggcggctc ggcccgctcc cgggacagga accgctcgaa
     1321 gaggaggccc atgcgcaccg gatcgatggc agtgatcccc aggcagtagc agaccgccga
     1381 gttcgccgcg gagccccgg
//
LOCUS       DATIFF010000283         2282 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_192363, whole genome shotgun sequence.
ACCESSION   DATIFF010000283 DATIFF010000000
VERSION     DATIFF010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2282
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192363"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            36..356
                     /locus_tag="VLD58_04075"
     CDS             36..356
                     /locus_tag="VLD58_04075"
                     /inference="COORDINATES: protein motif:HMM:NF024845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HSB53504.1"
                     /translation="MTTENKPSRNEEEYFAKLEAERIERKRAEQAKLNESAERKSHYL
                     RCPKCGGHLKTEEFHRIQVDRCPDCHGVWFDGGEIEAVLHATDRGFLSRTLGDFMGSL
                     RRKG"
     gene            419..>2282
                     /gene="purL"
                     /locus_tag="VLD58_04080"
     CDS             419..>2282
                     /gene="purL"
                     /locus_tag="VLD58_04080"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HSB53505.1"
                     /translation="MTPEVVKEHNLTPSEHERIRSILGREPTLTELGIFSALWSEHCS
                     YKHSKPILKKFPTQGPQVVQGPGENAGVLRLPQGWAVAFKIESHNHPSAVEPYQGAAT
                     GVGGILRDVFTMGARPVAVLNSLRFGPLDSPRNRYLFAGVVKGVGDYGNCVGIPTLAG
                     EVDFAPGYSGNPLVNAMCVGLLRESDLMRAAAHGVGNVLISVGSRTGRDGIHGASFAS
                     EDLSEQSEARRPQVQVGDPFTEKLLLEATLELIESKIIVAIQDMGAAGLTSSSAEMAA
                     RGGVGVEVETDKVPIREAGMTPYEIMLSESQERMLVVAEPHRVDAIKAVCAKWELEAA
                     VVGRVTDDGLYRIRHNGVTVAEIPGKPLVDEAPVYYPEAKEDAEAAVRRSGAPSAPAK
                     ADVQGALPLLLDEPSIASKRWVYEQYDSTVQANSLITPGGDAGVFKVGETGFGLAVTV
                     DCNSRLVALDPYEGGKATVAEAARNIACTGAVPLGITDCLNFGNPERPGVFFQFKEAC
                     RGISDACIAFNTPVTGGNVSFYNQSPTGAIDPTPTVGMVGLLEKLEFKVASHFREAGD
                     KVVLLGETRGKLGGSAYWTYVRDFVGGEQPAVDLEAERRLQQLLVEAARRKLVHS"
BASE COUNT          397 a          758 c          798 g          329 t
ORIGIN      
        1 gcctccggcc ccgacacttc acttgaactt gagccatgac gacagaaaac aaacccagcc
       61 ggaacgaaga agaatatttc gccaagctcg aggcggagcg gatcgaacgg aagcgggccg
      121 agcaggcgaa gctcaatgaa agcgcggagc ggaagtcgca ctacctccgc tgccccaagt
      181 gcggcgggca cctcaagacc gaggagttcc accggatcca ggtggaccgc tgccccgact
      241 gccacggcgt ctggttcgac ggcggcgaga tcgaggcggt gctgcacgcg accgaccgcg
      301 gcttcctgag ccggacgctg ggggatttca tggggagttt gaggaggaag ggttgacgaa
      361 ttcaggcaca gccacggcgc ctcggaccaa ggccagtccc ttccccgggg agcgacccgt
      421 gacgcccgag gtggtgaagg aacacaacct caccccctcc gagcatgagc ggatccgctc
      481 catcctcggc cgggagccga ccctcaccga actgggcatc ttcagcgcgc tctggtcgga
      541 gcactgctcc tacaagcact cgaagccgat cctcaagaag ttcccgaccc aggggcccca
      601 ggtggtccag ggtccgggcg agaacgccgg cgtgctgcgc ctcccgcagg gctgggcggt
      661 cgccttcaag atcgagtccc acaaccaccc gtcggcggtg gagccctacc agggtgccgc
      721 gaccggcgtg ggcgggattc tccgcgacgt cttcaccatg ggtgcccggc cggtggcggt
      781 gctcaactcg ctccgcttcg gcccactcga ctccccgcgg aaccgctacc tcttcgccgg
      841 ggtggtgaag ggcgtgggcg actacggcaa ctgtgtcggc atcccgacgc tcgcgggcga
      901 agtcgacttc gcgcccggct acagcggtaa cccgctggtc aacgccatgt gcgtgggcct
      961 gctccgggag tcggacctga tgcgggccgc ggcccacggc gtcggcaacg tgctgatctc
     1021 ggtgggatcg cgtaccgggc gggatggcat tcacggcgcc agcttcgcct cggaggatct
     1081 ctccgagcag agcgaggccc gccggcccca ggtgcaggtg ggcgacccgt tcaccgagaa
     1141 gctcctcctc gaagccacgc tggagctgat cgagtcgaag atcatcgtcg cgatccagga
     1201 catgggcgcg gcgggactca cgagctcgtc cgccgaaatg gcggcgcggg gcggcgtggg
     1261 ggtcgaggtc gagaccgaca aggtgccgat ccgcgaagcg ggcatgacgc cctacgagat
     1321 catgctgagc gaatcgcagg aacggatgct ggtggtggcg gagccccatc gggtcgacgc
     1381 gatcaaggcg gtctgcgcca agtgggagct cgaggccgcg gtggtgggcc gggtgaccga
     1441 cgacgggctc tatcggatcc gccacaacgg agtcaccgtg gccgagatcc ccggcaagcc
     1501 gctggtggac gaggcgccgg tgtactatcc cgaggcgaag gaagatgccg aggctgcggt
     1561 caggcggtcc ggcgctccgt cggccccggc aaaggcggac gtgcagggcg ccctgcccct
     1621 cctcctcgac gagccgtcca tcgcctcgaa gcgctgggtg tacgagcagt acgactccac
     1681 cgtgcaggcg aattcactga tcacgccggg cggcgatgcc ggggtcttca aggtgggcga
     1741 gaccggattc ggtctcgcgg tcacggtcga ctgcaacagc cggctggtgg cgctcgatcc
     1801 ctacgagggt ggcaaggcca ccgttgccga agcggcccgc aacatcgcct gcaccggcgc
     1861 cgtccccctc ggcatcaccg actgcctcaa tttcggcaac ccggaacggc cgggcgtgtt
     1921 cttccagttc aaggaagcct gccggggcat ctccgacgcc tgcatcgctt tcaatacacc
     1981 ggtcaccggc ggcaacgtca gcttctataa ccagagcccg accggcgcga tcgaccccac
     2041 ccccacggtg gggatggtgg gcttgctcga gaaactagaa ttcaaggtag ccagccactt
     2101 ccgggaggcc ggggacaagg tcgtcctcct gggcgagacc cggggcaagc tgggcggctc
     2161 ggcgtactgg acctacgtcc gcgacttcgt gggcggggag cagccggcgg tggacctcga
     2221 ggccgagcgg cggctgcagc agctcctggt ggaggcggcg cggcggaagc tcgtccattc
     2281 gg
//
LOCUS       DATIFF010000284         1063 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_345400, whole genome shotgun sequence.
ACCESSION   DATIFF010000284 DATIFF010000000
VERSION     DATIFF010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_345400"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..230
                     /locus_tag="VLD58_04085"
     CDS             <1..230
                     /locus_tag="VLD58_04085"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HSB53506.1"
                     /translation="TLHGRFVIHGVTRPADLTGHVVLGHEQSRVWANTPLNLKDYKIG
                     GLSKALGLLKMHENIEVHVDVTFGHAPGAPQ"
     gene            230..>1063
                     /locus_tag="VLD58_04090"
     CDS             230..>1063
                     /locus_tag="VLD58_04090"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSB53507.1"
                     /translation="MLWLVLGLALALVAALVALARVRRAPVERPDRNVHLEQIFETFP
                     HALTLRSLDGRLLRANAEFTRLFQYSPGEVVGVNIDRLLGVPGGERTGAVERMLTSAS
                     KVWRQTRRRRRDGSVIEVSHTGAPLTQNGQPVALYEVYHDLTSQLRAEAMITGQERLL
                     EAFFTQSLDGFFFMMLDQPIRWSDDADKDALIEYAWRHHRITRVNGAMLSQYGFSREQ
                     MLGLTPADLYAHDPAEGRAAWRRFFDAGRIHTVTRERRADGTPILIEGDYVCLYDDEG
                     RI"
BASE COUNT          164 a          368 c          355 g          176 t
ORIGIN      
        1 tgacgctgca cgggcgcttc gttatccacg gggtcacccg tccggccgat ctcaccgggc
       61 atgtcgtgct gggtcatgag cagtcgcggg tatgggccaa caccccgctc aatctcaagg
      121 actacaagat cggcgggctc agcaaggcgc ttggattgct caagatgcac gagaacatcg
      181 aagtgcacgt cgacgtcacc ttcggtcatg ccccgggggc gccccagtaa tgctctggct
      241 ggtcctcggc ctcgcactgg cgctggttgc cgcactggtc gccctggcgc gggtccggcg
      301 ggcgccggtg gagcggccgg accggaacgt ccacctggaa cagatcttcg agaccttccc
      361 ccacgcgctc accctccgct cactcgacgg gcggctgctc cgggccaacg ccgagttcac
      421 ccggttgttc cagtattcgc cgggagaggt cgtgggggtc aacatcgacc ggctgcttgg
      481 tgtcccgggc ggcgagcgca ccggggcggt cgagcggatg ctgacctcgg ccagcaaggt
      541 ctggcgccag acccgccggc gccggcgcga cgggtcggtg atcgaggtct cccacaccgg
      601 cgcgccgctc acccagaacg gtcagccggt ggcgctctac gaggtctatc acgatctcac
      661 ctcccagctc cgcgccgagg cgatgatcac cggccaggag cggctgctgg aggcgttctt
      721 cacccagtcg ctcgacggct tcttcttcat gatgctggat cagccgatcc gctggagcga
      781 cgacgccgat aaggacgcgc tgatcgagta tgcctggcgg catcaccgga tcacgcgggt
      841 gaacggcgcc atgctctcgc agtacgggtt ctcccgcgag cagatgctcg ggctcacccc
      901 cgccgatctg tatgcccacg atccggcgga aggccgggcg gcgtggcggc ggttcttcga
      961 tgccggccgg atccataccg tcacccggga gcgccgcgcc gacgggactc caatcctgat
     1021 cgagggcgac tacgtctgcc tctacgacga cgagggccgg atc
//
LOCUS       DATIFF010000285         1197 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2191978, whole genome shotgun sequence.
ACCESSION   DATIFF010000285 DATIFF010000000
VERSION     DATIFF010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1197
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2191978"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..400)
                     /locus_tag="VLD58_04095"
     CDS             complement(<1..400)
                     /locus_tag="VLD58_04095"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HSB53508.1"
                     /translation="MHLLIPWFTRLAIDNLSQGPSRRWDLLLFPGLIALAAAGQGVFR
                     YFWRTNVFGFSRHIEWDLRNQLFAHLQRLPLAYFQRMKTGDLMSRLTNDLASVREMLG
                     IGAVAALDGAVLILAALPLMLDIDPWLTLWS"
     gene            complement(699..1043)
                     /locus_tag="VLD58_04100"
     CDS             complement(699..1043)
                     /locus_tag="VLD58_04100"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB53509.1"
                     /translation="MDDDAAVRTTTVSLLRAAGHMVSDADGGATGIERLADGPLDLVL
                     TDLGMPEMTGWDVARAARARHPRMPVVLLTGWGEHGTGETPPRGLVDRILAKPVAMND
                     LLAVIDDLTAGR"
BASE COUNT          208 a          390 c          434 g          165 t
ORIGIN      
        1 gggaccacag cgtgagccac gggtcgatgt cgagcatcag gggcagagcc gccaggatca
       61 gcaccgcccc gtccagcgcc gccacggcgc cgatgccgag catctcccgc accgaggcca
      121 ggtcgttggt cagccgggac atcaggtcgc cggtcttcat gcgctggaag tacgccagcg
      181 gcagccgctg gagatgagcg aagagttggt tccgcaggtc ccactcgatg tggcgggaaa
      241 atccgaagac gttggtccgc cagaagtacc ggaagacccc ctgcccggcg gcggccagcg
      301 cgatcaggcc gggaaacagc aggagatccc accggcggct cggcccctgg gacaggttgt
      361 cgatcgccag acgcgtgaac cacgggatga gcaggtgcat gacatcggtg gcgagcaggg
      421 ccaggatgcc gctgagaaga agccggcggt gccggtgaag aattgggcgg acgtgccgga
      481 agtgcctacc gatggatgac ctcgcaggaa tgtcgggttt gaaagcggat tgtgcaatgg
      541 gagtgcggag cttgcaagcg gggaggcgcg ttatcccgga atatcggcga ggagcacggg
      601 cgcgctccgg atcgaatgac caaagaccaa ttcccaaggg ccgatggtgg tcggcgcagg
      661 ccgggcggtg gccagaggcg ctgcgctcga cggtccgatc acctgcccgc cgtgagatcg
      721 tcgatgacgg ccagcaggtc gttcatggca acgggttttg ccaggatccg atcgacgagc
      781 ccgcgcggcg gcgtctcgcc ggtcccgtgt tcgccccagc cggtcaggag gacgaccggc
      841 atcctcggat ggcgcgcccg ggccgcgcgg gcaacgtccc acccggtcat ctccggcatg
      901 ccgaggtccg tcagcacgag atccaacggg ccgtcggcca gccgctcgat gcccgtggca
      961 cccccgtctg catcgctgac catgtgcccg gcggcgcgca gcaggctgac cgtcgtagtg
     1021 cgaaccgcgg catcgtcgtc cacgaccagg atccgccgcg ggaccggtgg acgcatcggg
     1081 cgcgagggtg cggcgtcgtc ctcgccgccg gctgcaggcc gcaaccgaag gctcacggtc
     1141 gtcccctggc ggggagcgct tcgcagcgcg atatgccctc catgccgctc catgatg
//
LOCUS       DATIFF010000286         1224 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_653301, whole genome shotgun sequence.
ACCESSION   DATIFF010000286 DATIFF010000000
VERSION     DATIFF010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_653301"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..655)
                     /locus_tag="VLD58_04105"
     CDS             complement(<1..655)
                     /locus_tag="VLD58_04105"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HSB53510.1"
                     /translation="MFAGKWYAYLITGSAAILSDAAESVVHVVAVSFAFYALWLSHQP
                     PDQSHPYGHDRIGFISAGFEGGMISIAAFYIIYESVRKWMAGLHLEKVTTGTLLVTAA
                     ALVNLALGLFLVWQGRRHRSLILVANGKHVLTDVWTSGGVILGLVLVLVTGWLPFDPI
                     CAILVASNILWMGGKLIRQSVGGLMDEADPKLDDLIHLTLDRETAARGLAYHELRYRN
                     "
     gene            953..>1224
                     /locus_tag="VLD58_04110"
     CDS             953..>1224
                     /locus_tag="VLD58_04110"
                     /inference="COORDINATES: protein motif:HMM:NF018530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53511.1"
                     /translation="MHSLHDLLANSAPALLFTVVGLGYFLGNIRIRGFSLGIAAVLFV
                     GLVFGALDPVAFVLPEVIYVLGLILFVYTVGLQSGPIFFNLFRRQWV"
BASE COUNT          185 a          417 c          430 g          192 t
ORIGIN      
        1 tgttgcggta ccgcagctcg tgataggcga gcccgcgcgc cgccgtctcc cggtccagcg
       61 tcagatgaat gaggtcgtcg agtttcgggt ccgcctcgtc catcagcccg cccaccgact
      121 gccggatcag cttcccgccc atccacagga tgttcgatgc gacgaggatc gcgcagatcg
      181 ggtcgaaggg gagccagccc gtcaccagga ccagcaccag gccgaggatg acgcccccgc
      241 tggtccacac gtcggtcagg acgtgcttcc cgttcgcgac gaggatcagg gaccggtggc
      301 ggcgaccctg ccagacaagg aacagaccga gggccaggtt gaccagcgcc gcggcggtga
      361 cgagcagcgt gcccgtggtg accttctcga ggtgcaggcc ggccatccac ttccgcaccg
      421 actcgtagat gatgtagaag gcggcgatgc tgatcatccc accctcgaag ccggccgaga
      481 tgaatccgat gcggtcgtgg ccgtagggat gggactgatc ggggggctgg tggctgagcc
      541 acagcgcgta gaacgcgaaa ctcaccgcca ccacgtgcac caccgactcc gcggcgtcgg
      601 agaggatcgc cgccgatccg gtgatcaggt aggcgtacca cttccccgcg aacatcagca
      661 gcccgaccgc gaacgagagg cggatcgcga gcagctgctg ggtccgcgct ctggcgagcc
      721 cggcgggcgc agcggtgccg ggggtggccg tcgccgtggg gcgctcctcg ctggatggga
      781 gggccgccgg aaacgacggc ccgggcctat gctaccggcc ggtcacgccc ggcgccagag
      841 cggcggcgcg ccttggaaac gagtctcaac gtccgcggtg gcgcggtccg gatgccgccg
      901 gtagaatccc ccgggccgcc gtcggcgggc cttggaggag cccctcacag cgatgcacag
      961 cctgcacgac ctgctcgcga actccgcgcc ggcgctgctg ttcaccgtcg tcgggctcgg
     1021 ctacttcctg gggaacatcc gcatccgggg gttcagcctc gggatcgccg cggtgctgtt
     1081 cgtcgggctg gtgttcggcg cgctcgatcc ggtggcgttc gtgctgccgg aggtcatcta
     1141 cgtcctcggg ctgatcctgt tcgtctacac ggtcgggctc cagtcgggcc cgatcttctt
     1201 caacctgttc cgccggcagt gggt
//
LOCUS       DATIFF010000287         1646 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1576688, whole genome shotgun sequence.
ACCESSION   DATIFF010000287 DATIFF010000000
VERSION     DATIFF010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1576688"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            158..1362
                     /locus_tag="VLD58_04115"
     CDS             join(158..437,437..1362)
                     /locus_tag="VLD58_04115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558251.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HSB53512.1"
                     /translation="MAGASRVSLEQRARAVRLVTEARSGYRLEWAAIESVAGKIGVSA
                     ETLRTWVRQAQVDGGQRPGMTSEESAEVKRLRRENAELRRANEILKAAAGFLRSRARP
                     PTTTLVTFIDEHQDRCDGGLRWGVEPICRVLAEHGLQIAPATYYAAKTRPPSSRSLRD
                     EQLKTMIADMHAVNYGVYGVRKMHAALRRDGVVIGRDHTGRLMRKLGLAGVRRGQPKR
                     TTRPGESAARPDQLWVCDLTYLRTWVGFAYLALVLDVFSRRIVGWALATHLHTDLPLE
                     ALEMALWTRHHQVQGLVHHTDAGSQYLAIRYTATLAAAGAVPSVGTVGDSFDNAMAES
                     TIGQLKAELVHRRGPWRTVEQLEFALFECIDWWNHRRLHTEIGMRTPAEAEAAHYAQP
                     QPAQRAGSQ"
BASE COUNT          277 a          581 c          558 g          230 t
ORIGIN      
        1 cgcaagtccg acggcttaca ggacactagg ccggcccatt cccgcaggtg atgttcccga
       61 gtcgcctggt ccagcccatg ccagaccacc aacggcaaca actcgattga accgtcctgg
      121 tttccgtggg gactccatcc cgtgaggaga tggggtcatg gcaggtgcaa gcagggtctc
      181 gctggagcag cgggctcggg cggtgcggct ggtgacggag gcccggtcgg gttaccggtt
      241 ggagtgggcg gcgatcgagt cggtcgctgg caagatcggc gtctcagcgg agacgctgcg
      301 cacgtgggtg cggcaggcgc aggtggacgg cgggcagcgg cccgggatga cgtctgagga
      361 gtcggccgag gtcaagcggc tgaggcggga gaacgccgag ctgcgccggg cgaacgagat
      421 cctcaaggcg gccgcggctt tcttcggagc cgagctcgac cgcccacaac cacgttggtg
      481 accttcatcg acgagcatca ggaccgctgc gacggcggcc tgcgctgggg agtcgagccg
      541 atctgccggg tgcttgccga gcacggcctg cagatcgccc ccgccaccta ctacgccgcc
      601 aagacccggc cgccgtcgtc tcgatcgctg cgggacgagc agctcaagac gatgatcgca
      661 gacatgcacg cggtgaacta cggcgtgtac ggggtccgca agatgcacgc cgcgctgcgc
      721 cgcgacgggg tcgtgatcgg ccgggaccac accggccggc tgatgcgcaa gctcgggctg
      781 gccggggtgc gccgcggcca gccgaagcgg accacccgcc cgggcgagtc cgcggcccgg
      841 ccggaccagt tgtgggtgtg cgacctgacc tacctgcgga cctgggtcgg attcgcctac
      901 ctggcgctgg tgctcgacgt gttctcccgc cggatcgtcg gctgggcgct ggccacccat
      961 ctgcacaccg acctgccgct ggaggcgctc gagatggccc tgtggacccg gcaccaccag
     1021 gtgcaggggc tggtccatca caccgacgcc ggcagccagt acctggccat ccgctacacc
     1081 gccacgctgg ccgccgccgg cgccgtgccc tcggtcggca ccgtcgggga ctcattcgac
     1141 aacgcgatgg ccgagtccac gatcgggcaa ctgaaggctg agctggtgca ccggcgcggc
     1201 ccgtggcgca ccgtcgagca gctggagttc gccctgttcg aatgcatcga ctggtggaac
     1261 caccgccggc tacacaccga gatcggcatg cgcacccccg ccgaggcgga ggccgctcac
     1321 tacgctcaac cccagcccgc gcagcgggct ggttcccaat aagtcgagtc cctacaagac
     1381 ccagggcgct tcaccgccct gcgggcgctc ccgctgcgac ggaaccagcg gctcggccag
     1441 ctcccacagc ccgtcaggca ccagctttcg gcccagtcgt tcccccacca ccggacaaca
     1501 ccgtgcaggt caccgcccat ccacgtgaga caagctctta gtgagaacgc agccgatgct
     1561 gcctccacac caccctaacc gaggaagcac gtactcgacc cggtgccaag tggtcgagga
     1621 acatccacca ccaaggggaa tgcttc
//
LOCUS       DATIFF010000288         1292 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1269960, whole genome shotgun sequence.
ACCESSION   DATIFF010000288 DATIFF010000000
VERSION     DATIFF010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1269960"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..638)
                     /locus_tag="VLD58_04120"
     CDS             complement(<1..638)
                     /locus_tag="VLD58_04120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53513.1"
                     /translation="MATRGSGLGAVLAVAGLLGFASPVAAQSTAPARYVVLITFDGVR
                     PADFFGGMDSSVAAFADSSGIHDSARVWRSYWRPTAVERRRALMPFFWDSLAPRGMVL
                     GDPATAGRASVANTEGFSAPGYMEILTGQAQPTVTSNDPVRYPFETVLQFARHKLKLG
                     PMQVPTFASWENFRSYVANRDHDVYVNAGYEGIPEPFNTPELARLVTLQSRAL"
     gene            complement(700..>1292)
                     /locus_tag="VLD58_04125"
     CDS             complement(700..>1292)
                     /locus_tag="VLD58_04125"
                     /inference="COORDINATES: protein motif:HMM:NF015882.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="malic enzyme-like NAD(P)-binding protein"
                     /protein_id="HSB53514.1"
                     /translation="HAVPAQPDLRHAIEAFQPTALVGVSGSAGGFTEPAIRALSRINP
                     RPIIFPLSNPTSCSECTAEQAYAWSEGRAVFASGSPFPPVTVNGRRMTPSQSNNAYVF
                     PGVGLGVILCQAARVTDSMFHAAGRTLASLVTDAALAEGRLFPPLGEIRRVSAAIAVE
                     VMRVAYQEQLAARPQPASLEQVVAENMYDARYPDYR"
BASE COUNT          222 a          432 c          446 g          192 t
ORIGIN      
        1 agcgcccggc tctggagcgt taccagccgg gccagctcgg gtgtgttgaa cggctccgga
       61 atcccttcgt acccggcgtt gacatacacg tcgtggtccc ggtttgcgac atagctccgg
      121 aaattttccc agctggcgaa agtcggcacc tgcatcggac cgagcttgag cttgtgccgc
      181 gcgaactgga gcaccgtctc gaacgggtag cgaaccgggt cattggaggt caccgtgggc
      241 tgggcctgcc cggtgaggat ctccatgtag cccggcgcgg aaaacccttc ggtgttggcc
      301 accgacgcgc ggcccgcggt ggcaggatca cccagcacca ttccccgcgg cgccagcgaa
      361 tcccagaaga acggcatcag cgcccggcgc cgctccaccg cggtgggacg ccagtacgac
      421 cgccagaccc gggctgaatc gtggatcccg ctggaatcgg caaaggccgc cacgctcgag
      481 tccatcccgc cgaagaagtc ggcaggacgc accccgtcga aggtgatcag gacgacatag
      541 cgtgctggtg ccgtggattg cgccgcaact ggagatgcga agcccaggag acctgccact
      601 gccaggaccg cgccgaggcc gctgccccgt gttgccataa cactccggaa gagagttgcc
      661 ttttgccgca ggaaatatgg cagatcgggc ggcgccgcgt cagcggtagt cagggtagcg
      721 ggcatcgtac atgttctccg ccaccacctg ctccaggctg gccggctggg gccgggccgc
      781 gagctgctcc tgataggcca cccgcatcac ctctaccgcg atcgccgcgg aaacccggcg
      841 gatctcgccg agcggtggaa agagcctgcc ttcggcgagc gccgcgtcgg tgacgagcga
      901 ggcgagcgtg cggcccgccg catggaacat cgagtcggtg acccgtgcgg cctggcagag
      961 aatcactccc aggccgacac ccggaaagac gtaggcgttg ttcgactggc tcggcgtcat
     1021 ccgccggccg tttaccgtga ccggcgggaa gggactgccg ctcgcgaaca ccgccctccc
     1081 ttccgaccag gcgtacgcct gctcggcggt acactcggaa caactggtgg gattggagag
     1141 cgggaagatg atcggccggg gattgatccg gctcagggcg cggatcgccg gctcggtgaa
     1201 gccaccggcg ctgcccgaga cgccgacgag cgcggtcggc tggaacgcct cgatcgcgtg
     1261 ccgcaggtcg ggttgcgccg gcaccgcgtg gg
//
LOCUS       DATIFF010000289         4951 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2192648, whole genome shotgun sequence.
ACCESSION   DATIFF010000289 DATIFF010000000
VERSION     DATIFF010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4951)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4951)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4951
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2192648"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1071
                     /locus_tag="VLD58_04130"
     CDS             <1..1071
                     /locus_tag="VLD58_04130"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HSB53515.1"
                     /translation="GVRSKEEEPLLPPDPSSLLTPYSSLSFSVLPPRTERLDRFLADQ
                     LSLSRTQAARLVADARVSVNTKVARASRTLERGERVLVEFPESEPPRTLKPAPMHLDV
                     VYEDDHLAVIDKPAGLVVHPAPGHWDDTLVNALVARGTTLAGGAAGRPGIVHRLDRDT
                     SGLMVIAKTDLAHRKLGAMLAARRITRRYAALSWGHLNQSPEVIEAPLGRHPQDRKRV
                     TVTEQGRQARTDAYVVARFNLVELLRLELHTGRTHQIRVHLAHIGHPIVGDPVYGAGG
                     SRRMTGAQRTAAEALERLAPRQALHAAWLSFRHPVSGEPLDFRSEWPADLGPLLTAAG
                     GVRDAVAPAGALAYLRFFEAHG"
     gene            1064..1498
                     /locus_tag="VLD58_04135"
     CDS             1064..1498
                     /locus_tag="VLD58_04135"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HSB53516.1"
                     /translation="MADQTALRLVLFRLGSLVCAAPATGVREVIPAGTPTRIPGASTS
                     VSGLLNLRGSLLTVVSGSRVIGLEEPELSPESVLVLDLDGRAVGLAVDEVLDLIEVQP
                     DQLEDGEALPGIDPMLVRQVGHFEGRVFAVLDLEKLVVPLLG"
     gene            1635..1997
                     /locus_tag="VLD58_04140"
     CDS             1635..1997
                     /locus_tag="VLD58_04140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB53517.1"
                     /translation="MSHTVLVCDDAIFMRTMISDILAQAGFEVVGEAETGREAVEKYR
                     QLKPDLVTMDIVMPDMGGIEAVREICKDDADARILMCSAMGQQALVVEAIQAGAKDFV
                     VKPFQPSRVLEAVQRVLG"
     gene            2002..3870
                     /locus_tag="VLD58_04145"
     CDS             2002..3870
                     /locus_tag="VLD58_04145"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheA"
                     /protein_id="HSB53518.1"
                     /translation="MDLSRYAALFLTESREQLSACGQALLDWERTPGAVEPVVSLFRA
                     MHTFKGMAAAMGYSNLTELAHRTESVLDLLRSDPASGRELIDLFFRITDALEQGVAGA
                     IEGGDAKLDFTALLGELDQASVATSPTGSWAIPARPEAPAPKAPAEVAGGTEIRVTIR
                     PGAAMRGARAMLVLRKAESLGAVTSLRPQPAAFEQDDFDGRLSFALQTAQPHAAIRAA
                     LESVGDVAEVEFGETRAEQGGEASGRGRQIRIDLRRLDALMNQVGELVVAKGQLAEIA
                     EASGSPDLKAVSSRIGRVVSDLHGEVVQARMTPVWQVFDRFPRVVRDLARQLGRRVRF
                     EVEGEETQLDRAILDDLGEPLIHLLRNAVDHGIEAPAARKKAGKPEEGLIRVSAASDR
                     TTVLIRVSDDGKGIDRAKALPEALKSGMVPSGTVELSDDVLLRLLSRPGYSTAAQVTD
                     VSGRGMGMDAVLSRVRTLGGSVELQTERGRGSTFTLRLPMTLAIVRALLARVGEERYA
                     IPLSGIAETVEFHPDRVAALEGREAYVLRDTLVPTVRLRDRLGVHGVRPVGKLPAVIV
                     EVGERRAAVVVDALLGQQEIVVEAFDAPRGTLPVFSGATILGDGAPALIVDPAALV"
     gene            3881..4501
                     /locus_tag="VLD58_04150"
     CDS             3881..4501
                     /locus_tag="VLD58_04150"
                     /inference="COORDINATES: protein motif:HMM:NF016398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheC"
                     /protein_id="HSB53519.1"
                     /translation="MDDVRELHALQRDALREVANIGAGHAATALSQLTNRRIMISVPE
                     VNIVRLEEVPEILGKADDVVAAVLMHMMGDLTGRTLVLFPEESARTLVDILLRRPLGT
                     TTGFSEMEQSGLKEVGNILSSAYLNALSDFMGMMLVPSVPSLAIDLCGAVLTSIYMNF
                     GYDRDYVFCVETQFLFEDPGLKLRGHFLLLPDLASLRAIFDAIRLT"
     gene            4509..>4951
                     /locus_tag="VLD58_04155"
     CDS             4509..>4951
                     /locus_tag="VLD58_04155"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSB53520.1"
                     /translation="MTGPALSDRDLSVLRSFARRIDAADAGAHNNLGVFYYQKGMIPE
                     AIDEFLRALELDPRMQTAKENLEIAYHSTGYYDRRVAELRERLKRDPMDTAARWELGR
                     TCAALGQWADAVTEFEVLLSRRPDDVATLIQLGLAERGRGNLEAAT"
BASE COUNT          735 a         1661 c         1770 g          785 t
ORIGIN      
        1 ggagtgagga gtaaggagga ggaacctctc cttccacccg acccctcctc actcctcact
       61 ccttactcct cactctcctt ctcggttctc cctcccagga cggaacggct ggatcgcttc
      121 ctcgcggacc agctgtcgct ctcacggacc caggccgcgc gcctggtggc cgatgcgcgc
      181 gtgtcggtca ataccaaggt cgcccgcgcg tcgcggaccc tcgaacgggg cgagcgggtg
      241 ctggtcgagt ttcccgagtc ggaaccgccc cgcaccctca agcccgcgcc gatgcacctc
      301 gacgtggtct acgaggacga tcacctcgcc gtgatcgaca agcctgccgg gctggtggtg
      361 cacccggccc cgggccactg ggacgacacc ctggtgaacg cgctggtggc gcgcgggaca
      421 acgctggcgg gtggcgccgc gggacggccg gggatcgtgc accggctcga ccgcgacacc
      481 tcgggcctca tggtgatcgc caagaccgat ctggcccacc ggaagctcgg cgccatgctg
      541 gcggcgcggc ggatcacccg ccggtacgcc gccctcagct ggggtcacct caaccagagt
      601 ccggaagtga tcgaggcgcc gctcggccgg catccccagg accgcaaacg ggtcacggtg
      661 accgagcagg gccgacaggc ccgaaccgac gcctacgtgg tggcccggtt caatctggtc
      721 gagttgctgc ggctggagct gcatactggg cggacccacc agatccgggt acacctggcc
      781 catatcggcc acccgatcgt tggcgacccg gtctacgggg ccgggggaag ccgccggatg
      841 acgggggcac agcgaacggc agccgaagcc ctggaacggc tcgcaccccg gcaggcgctg
      901 cacgcggcgt ggctctcttt tcgccatccg gtgtcgggag agcccctcga tttccggtca
      961 gaatggcctg ccgatctggg cccccttctg accgccgccg ggggggtgag ggacgccgtt
     1021 gctccggctg gagcccttgc gtatcttcgt ttctttgaag cacatggctg atcaaaccgc
     1081 gctccggctc gtgctcttca ggctgggttc tctggtctgt gccgccccgg cgaccggggt
     1141 gcgcgaagtc attccagccg ggaccccgac ccggatcccg ggagcaagta ccagcgtgtc
     1201 cgggcttctc aatttgcggg gcagcttgct gaccgtggtg agcgggtccc gggtgatcgg
     1261 actcgaggag cccgaacttt ccccggagtc ggtgctggta ctcgatctgg acggccgcgc
     1321 ggtgggattg gcggtcgacg aggtgctgga tctgatcgag gtgcagcccg atcagctgga
     1381 ggatggcgag gcactgccgg gcatcgatcc catgctggtg cgccaggtgg ggcacttcga
     1441 gggtcgggtg ttcgcggtgc tggacttgga gaaactggta gttccgctcc tggggtaggg
     1501 ccattagccg ttagccgtta gccattagct attcgtctcg aacgagcctt cggttcgcca
     1561 ttgacgagag caagctgacc cggcgatcgc taacggctaa aggctaacgg ctaacggcca
     1621 tctggaggtc ccgcgtgagc cacacggtgc tggtctgcga cgacgccatc ttcatgcgca
     1681 ccatgatctc cgacatcctg gcccaggccg ggttcgaggt cgtcggcgaa gccgagaccg
     1741 ggcgcgaggc ggtcgagaag taccgccagc tcaagcccga cctggtcacc atggacatcg
     1801 tcatgccgga tatgggcggc atcgaggcgg tgcgggagat ctgcaaggac gacgcggacg
     1861 cccggatcct catgtgcagc gcgatgggcc agcaggccct ggtggtcgag gccatccagg
     1921 ccggcgccaa ggatttcgtg gtcaaaccat tccagccttc ccgggtgctc gaggcggtcc
     1981 agcgcgtcct gggctgacgc catggacctc tcccgctacg ccgccctctt cctcaccgag
     2041 agccgcgaac agctgagcgc ctgcggccag gcgctgctgg actgggagcg gacgcccggt
     2101 gcggtggagc cggtcgtcag tctgttccgc gccatgcaca ccttcaaggg catggcggcc
     2161 gcgatgggct actcgaacct gaccgagctg gcccaccgga ccgagtcggt gctcgacctg
     2221 ctccgcagtg atccggcctc ggggcgggag ttgatcgacc tgttcttccg gatcaccgac
     2281 gcgctggagc agggggtggc cggcgccatt gaaggcggcg acgcgaagct cgacttcacc
     2341 gcgctcctgg gtgagctcga tcaggcctcg gttgccacgt cgccgacggg cagttgggcc
     2401 atcccggccc ggcccgaggc gcccgcgccc aaggcgcccg ccgaggtcgc cggggggacc
     2461 gagatccggg tcaccatccg gcccggcgcc gcgatgcgcg gcgcccgcgc catgctggtg
     2521 ctccgcaagg ccgagtcgct gggcgcggtg accagcctgc ggccgcagcc ggccgcgttc
     2581 gagcaggacg attttgacgg gcggctcagc ttcgcgctcc agaccgccca gccgcacgcc
     2641 gctattcgag cggcgctcga gagtgtgggc gacgtcgccg aggtggagtt cggcgagacc
     2701 cgcgcggagc agggcggtga agcgtccggg cgcggccggc agatccggat cgatctgcgc
     2761 cggctggatg ccctgatgaa ccaggtcggc gagctggtgg tggccaaggg ccagctggcg
     2821 gagatcgccg aggcgagcgg gtcgccggac ctcaaggcgg tatcgtcgcg gatcgggcgg
     2881 gtggtgtccg acctgcacgg cgaggtggtg caggcccgga tgacgccggt gtggcaggtg
     2941 ttcgaccggt ttccccgggt ggtgcgcgac ctggcccgcc agctgggccg gcgggtgcgg
     3001 ttcgaggtcg agggcgagga gacccagctg gatcgagcca ttctcgacga cctgggtgag
     3061 ccgctgattc atctgctccg caacgcggtc gatcatggga tcgaggcgcc ggcggcccgg
     3121 aagaaagcgg gcaagccgga agagggcctg atccgggtct cggccgcgag cgaccggacc
     3181 accgtgctga tccgggtgag tgacgacggc aaggggatcg accgggccaa ggcgctgccc
     3241 gaggcgctca agtcgggcat ggtcccgtcg ggcaccgtcg agctcagcga cgacgtgctg
     3301 ctccggctgc tgtcccggcc gggctactcg acggccgcgc aggtgaccga cgtgtcgggc
     3361 cgcgggatgg gcatggacgc ggtgctgagc cgggtccgga ccctgggcgg atcggtggag
     3421 ctgcagaccg agcggggccg tggcagcacc ttcaccctcc ggctcccgat gacgctcgcg
     3481 atcgtgcggg cgctgctcgc cagggtgggc gaggagcgct acgcgattcc gctgtcgggg
     3541 attgccgaga cggtggagtt ccaccccgac cgggtggcgg cgctcgaggg ccgcgaggcg
     3601 tatgtgctcc gcgataccct ggtgccgacg gtccggctcc gcgaccgcct gggagtccat
     3661 ggagtgcggc cggtgggcaa gctgcccgcg gtgattgtcg aagtcggtga gcggcgcgcc
     3721 gcagtggtgg tcgacgcgct cctgggacaa caggagatcg tggtcgaggc gtttgacgct
     3781 ccgcggggga cacttccggt tttcagcggg gccacgatac tcggcgacgg agcccccgcg
     3841 ctgatcgtgg atccggcagc gctggtgtga ggaggcccgg atggatgacg tgagagaact
     3901 gcacgcgctc cagcgggacg cgttgcgcga ggtggccaac atcggcgccg gccacgccgc
     3961 gaccgcgctg tcgcagctca ccaaccgccg catcatgatc agcgtgccgg aggtgaacat
     4021 cgtccggctc gaggaagtgc cggagatcct cggcaaggcg gacgatgtgg tggccgcggt
     4081 cctgatgcac atgatgggcg acctcaccgg ccgcaccctg gtgctgttcc ccgaggagag
     4141 cgcccggacc ctggtcgata tcctgctccg ccgcccgctc ggcaccacca ccggcttctc
     4201 cgagatggaa cagtccggcc tcaaggaggt cggcaacatc ctctcgagcg cctacctcaa
     4261 cgccctctcc gatttcatgg ggatgatgct ggtgccgtcg gtgcccagtc tggcgatcga
     4321 tctctgcggc gcggtcctga cctcgatcta catgaacttc ggctacgacc gcgactacgt
     4381 cttctgcgtg gagacccagt tcctcttcga ggaccccggt ctcaagctgc gcgggcactt
     4441 cctcctgcta ccggatctcg ccagcctccg cgccatcttc gacgccatcc ggctgacctg
     4501 agggcgccgt gaccgggccc gcgctgtccg atcgcgacct ctcggtcctc cgttccttcg
     4561 cacggcggat cgacgctgcc gatgcggggg cgcacaacaa ccttggcgtc ttctactacc
     4621 agaagggaat gattcccgag gcgatcgacg agttcctccg cgcgctggag ctggacccgc
     4681 ggatgcagac cgccaaggag aatctggaga tcgcctacca ctcgaccggc tattacgacc
     4741 ggcgggtggc ggagctgcgc gagcggctca agcgcgatcc catggacacc gcggcccgct
     4801 gggaactggg ccgcacctgc gccgcgctgg ggcagtgggc cgacgcggtc accgagttcg
     4861 aggttctcct ctcccgccgg cccgacgacg tcgccaccct gattcagctg ggcctggccg
     4921 agcggggccg gggaaatctc gaggccgcca c
//
LOCUS       DATIFF010000290         1330 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1116541, whole genome shotgun sequence.
ACCESSION   DATIFF010000290 DATIFF010000000
VERSION     DATIFF010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1330
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1116541"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="VLD58_04160"
     CDS             complement(<1..280)
                     /locus_tag="VLD58_04160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53521.1"
                     /translation="MAARRQGGMAARCGMALTISLLTSYFSLLTAQAPTSLTLYNDGR
                     VLVRRTLPIDLPKGDSEQRLALGVLDPASVFPLEDGVNFASTGYDAAVD"
     gene            complement(301..597)
                     /locus_tag="VLD58_04165"
     CDS             complement(301..597)
                     /locus_tag="VLD58_04165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53522.1"
                     /translation="MPLPGAWAPEVPCARCGTRVAGLGWGERCAACQAQRLRRANRIA
                     SRISLTATLLTGLYAGYRLPPTESARIYGMIVVVITYIAVRKIAQRVALELIRD"
     gene            complement(569..>1330)
                     /locus_tag="VLD58_04170"
     CDS             complement(569..>1330)
                     /locus_tag="VLD58_04170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HSB53523.1"
                     /translation="KEFELYANIRPARSFVPGGRFSDVNIVLVRENLEGLYVGVEHFI
                     AIGGDPRAVAESTAIVTRAGCERIIRYAFEYAIRHGRKKVTIVHKANILKMVSGLFLE
                     VGKRIQKEYEGRVQSNDMIVDNCAMQLVLKPEQFDVMVTTNMFGDILSDEVSGLVGGL
                     GLAPGANIGTHASIFEAVHGSAPDIAGKGIANPAAQMLAAAMMLDHLDELKLGNKIRD
                     AIEKTIVADNVRTRDLGGTATTREFGDAVARRVGA"
BASE COUNT          212 a          441 c          446 g          231 t
ORIGIN      
        1 cgtcgaccgc cgcgtcgtag ccggtgctgg cgaagttgac tccgtcctcg agcggaaaaa
       61 ccgaggcggg atcgagcacc ccgagcgcga ggcgctgctc ggagtcgccc ttggggagat
      121 cgatgggcag ggtccggcgc accagcaccc ggccgtcgtt gtagagggtg aggctcgttg
      181 gagcctgggc tgtgagaagt gagaagtaag aagtgagaag tgagatcgtc agcgccatcc
      241 cacatcttgc cgccatgccg ccctgccgcc ttgccgccat ttgctacctc cggtgaacac
      301 tcagtcgcga atcagctcca gggccacccg ctgcgcgatc ttccggaccg cgatgtaggt
      361 gatcaccacc acgatcatcc cgtagatccg agcgctctcg gtcggcggga gtcggtagcc
      421 ggcgtacagc ccggtcagca gtgtggccgt gagggagatg cggctggcga ttcgatttgc
      481 acggcggagc cgctgggcct ggcaggccgc gcagcgttca ccccagccga gtcctgcgac
      541 ccgcgtgccg caccgggcgc aggggacctc aggcgcccac gcgccgggca acggcatcgc
      601 cgaactcgcg cgtggtggcg gtgccgccca gatcgcgggt acgcacgttg tccgccacga
      661 tggtcttctc gatggcgtcg cggatcttgt tgcccagctt gagctcgtcg agatgatcca
      721 gcatcatcgc ggcggcgagc atctgggccg cgggattggc gatgcccttc ccggcgatgt
      781 ccggggcgct gccgtgcacc gcctcgaaga tcgaggcgtg ggtgccgatg ttggcgccgg
      841 gcgcgagccc caggccgccc accagcccgg agacttcgtc gctcaggatg tcgccgaaca
      901 tgttggtggt gaccatcacg tcgaactgct ccggcttgag caccagctgc atggcgcagt
      961 tgtcgacgat catgtcgttc gactgcaccc gcccctcgta ctccttctgg atccgcttgc
     1021 ccacttcgag gaagaggccg ctcaccatct tgaggatgtt ggccttgtgg acgatggtga
     1081 ccttcttccg cccgtgccgg atggcgtact cgaaggcgta gcggatgatc cgctcgcagc
     1141 cggcccgggt cacgatggca gtggactcag ccaccgcgcg gggatcgccc ccgatcgcga
     1201 tgaagtgctc cacgccgacg tagaggcctt ccaggttctc ccgcaccagc acgatgttca
     1261 catcgctgaa ccgccccccc ggcacaaagg accgggcggg gcggatattg gcgtacagct
     1321 cgaattcctt
//
LOCUS       DATIFF010000291         2153 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2192881, whole genome shotgun sequence.
ACCESSION   DATIFF010000291 DATIFF010000000
VERSION     DATIFF010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2153
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2192881"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1326
                     /gene="aceB"
                     /locus_tag="VLD58_04175"
     CDS             <1..1326
                     /gene="aceB"
                     /locus_tag="VLD58_04175"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004474 - malate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase A"
                     /protein_id="HSB53524.1"
                     /translation="RRVEITGPTEAKMMINALNSGARVFMADFEDALSPPWRNVVEGH
                     SNCLDAVRRRLTLTTAEGKEYRLGPTPATLVVRPRGWHLVERHVRVDGVPVPAGLFDF
                     GLFFFHNAAELRTRGSGPYFYLPKLEHHLEARLWNDVFVFAQAELGIPRGTIRATVLI
                     ETILAAFQMDEILFELREHAAGLNAGRWDYLFSVIKKFRHRPEFVLPDRARLTMTVPF
                     MRAYTELLVRTCHRRGAHAIGGMAAFIPSRKNPEINAQAFARVREDKSREAAAGYDGA
                     WVAHPDLVPVVREVFDQVLGTRPNQKDRLREDVRIGAAELLDTRDPGGRVTDAGVRGN
                     VSVALQYLAAWLDGAGAVAINNLMEDTATAEIARAQLWQWVRHGVRTEDGAPVTLERC
                     RSLLAEEVGRLERPDRPGRWREAAALLDELVGAKEFPEFLTVGAYEKLE"
     gene            complement(1378..1450)
                     /locus_tag="VLD58_04180"
     tRNA            complement(1378..1450)
                     /locus_tag="VLD58_04180"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1415..1417),aa:Asn,seq:gtt)
     gene            1633..>2153
                     /locus_tag="VLD58_04185"
     CDS             1633..>2153
                     /locus_tag="VLD58_04185"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSB53525.1"
                     /translation="MKHPVTLTINGMAHAVEVESRALLVQVLRDDLNLTGTHVGCDTS
                     QCGACTVLLDGRAVKSCTLFAVQAEGHAITTIEGFGTPERLHPLQTAFWEKHGLQCGF
                     CTPGMILCAADLLSRNPDPSEVEIRHAIEGNLCRCTGYQNIVTAIQAAAAAMRDAKAE
                     AAPAPTPPKPAGQP"
BASE COUNT          354 a          759 c          743 g          297 t
ORIGIN      
        1 cgccgggtgg agatcaccgg cccgaccgaa gcgaagatga tgatcaacgc gctcaactcg
       61 ggggcccgcg tcttcatggc ggacttcgag gacgcgctct ctcccccctg gcgcaacgtg
      121 gtcgagggcc actcgaactg cctcgacgcc gtccgccgcc gcctcacgct caccaccgcg
      181 gagggcaagg agtaccggct cggccccacc cccgcgacgc tggtggtccg cccccgcggc
      241 tggcatttgg tggagcggca cgtgcgggtg gatggggtgc ccgtccccgc cggactcttc
      301 gacttcgggc tgttcttctt ccacaacgcc gccgagctgc gcacccgggg gagcggcccg
      361 tatttctatc tgcccaagct cgagcatcac ctggaggccc ggctctggaa cgacgtcttc
      421 gtcttcgccc aggccgagct gggcatcccg cgcggcacga tccgcgcgac ggtcctgatc
      481 gagacgatcc tcgccgcctt ccagatggac gagatcctgt tcgagctgag ggagcacgcg
      541 gccggcctca atgccggccg gtgggactac ctcttcagcg tgatcaagaa gttccggcac
      601 cggccggagt tcgtgctgcc ggaccgggcc cggctgacga tgaccgtgcc gttcatgcgg
      661 gcttacaccg agctgctggt gcgcacctgc caccgccggg gggcccacgc catcggcggc
      721 atggcggcct tcatccccag ccggaagaac cccgagatca acgcgcaggc attcgcccgg
      781 gtgcgggagg acaagagccg cgaagcggcc gcgggctacg acggagcgtg ggtggcgcat
      841 ccggacctcg tgccggtcgt gcgcgaagtc ttcgaccagg tcctcggcac ccggccgaac
      901 cagaaggacc ggctccggga agacgtacgg atcggcgccg cggaactgct cgatacgcga
      961 gaccccggcg ggcgggtcac cgatgccggc gtgcggggaa acgtgagcgt ggccctccag
     1021 tacctcgctg cctggctgga cggcgcgggg gcggtggcga tcaacaacct gatggaagac
     1081 accgccaccg ccgagatcgc ccgggcacag ctctggcagt gggtgcgcca cggggtccgg
     1141 accgaggacg gggcaccggt caccctggaa cgctgccgaa gcctcctggc cgaagaagtg
     1201 gggcgactgg agcgtccgga ccggccgggc cggtggcgcg aggcggcggc gttgctcgac
     1261 gagctggttg gcgccaagga gtttccggaa ttcctgacgg tcggagcgta cgagaagctg
     1321 gagtagacgg catcagccgt cagccactct tggatggctg acggctgatg actcccactg
     1381 gggcggctgg ggtcgaacca gcaacctccc ggttaacagc cgggcgctct gccgattgag
     1441 ctacacccca tcgagaaacg ctggaaggcg aacggggtac gcaggttaca agcaggcgac
     1501 gcgtgggtca agagcgcggc gcaccgggtg atcggggcga ccgggacgca gcttgaccga
     1561 gatgtcgcgg ggggctagcc tatccttccg ccccgcgtcc caagccctcc gacccaaagg
     1621 agaccggctt ccatgaagca ccccgtcacc ctgacgatca acggcatggc gcacgcggtc
     1681 gaggtcgaat cgcgggccct gctggtccag gtgctgcgcg acgatctcaa cctcaccggc
     1741 acccacgtcg gctgcgacac gagccagtgc ggcgcctgca ccgtgctgct cgacggccgc
     1801 gccgtgaaga gctgcaccct gttcgccgtc caggccgaag gccacgcgat caccaccatc
     1861 gaaggcttcg gcacgccgga gcggctgcat ccgctccaga ccgccttttg ggagaagcac
     1921 ggtctccagt gcgggttctg cacgccgggc atgatcctgt gcgccgccga tctgctgagc
     1981 cggaatcccg acccgagcga ggtcgagatc cgccacgcga tcgagggcaa tctctgccgc
     2041 tgcaccggat accagaacat cgtgaccgcg atccaggcgg ccgccgccgc gatgcgcgac
     2101 gcgaaggccg aggccgcccc ggcccccacc cccccgaagc ccgccgggca gcc
//
LOCUS       DATIFF010000292         1071 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1116979, whole genome shotgun sequence.
ACCESSION   DATIFF010000292 DATIFF010000000
VERSION     DATIFF010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1116979"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1071
                     /locus_tag="VLD58_04190"
     CDS             <1..>1071
                     /locus_tag="VLD58_04190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53526.1"
                     /translation="QLSAKIGGPIRQAMAMTDRMGRQEGFPSGAAARLALSGLTPTQV
                     LRDLTAFEQATRPTYEALLARIGRDLHVDRVEAWDLEYWFHLQEQSVTANAYPADQGM
                     ARVRALATGMGFNVDSLPITLTIFDVPTGGIAFPIRPPYEARLLANPLPGVQFYTILF
                     HEYGHTLHAVHIRPDLPLSLLSMDQQPAAEGLGEIFGHFAYDRRFLARVAEVNPEQAA
                     ALERLGKLAQLLWLRRSIGANAYAEVQAYLDLDQDLDSVFAASYRKFVGVDLPPGDYA
                     GTRALFGTVPLYYPAYLYANMFATQVREAMKKEFGTDDLTREARVAPWLIRNFYGPGQ
                     SVPWQEKVRRATGRPLDSRALVE"
BASE COUNT          161 a          383 c          361 g          166 t
ORIGIN      
        1 cagctcagcg cgaagatcgg cggtccgatc cggcaggcga tggcgatgac cgaccggatg
       61 ggtcggcagg aggggttccc cagcggcgcg gcggcgcggc tcgcgctgtc gggtctcacg
      121 cccacccagg tgctgcgcga cctgaccgcg ttcgagcagg ccacccgccc cacctacgag
      181 gcgctgctgg cgcggatcgg ccgcgacctc cacgtggacc gggtcgaggc ctgggacctc
      241 gagtactggt tccatctcca ggagcaatcg gtcacggcga atgcctatcc cgcggatcag
      301 gggatggcga gagtccgggc gctcgccacg ggcatggggt tcaacgtgga cagcctcccc
      361 atcacgttga cgatcttcga cgtgccgacc ggcgggatcg cctttcccat ccggccaccc
      421 tacgaagcgc ggctgctcgc caatccgctc cccggcgtgc agttctatac catcctgttt
      481 cacgagtacg gccacaccct gcacgcggtg cacatccggc ccgacctccc gctctcgctg
      541 ctgtcgatgg accagcagcc cgcggccgag gggctgggcg agatcttcgg ccacttcgcc
      601 tacgaccgcc gcttcctggc ccgggtagcg gaggtgaacc cggagcaggc cgcggcgctg
      661 gagcggctgg gcaagctggc gcagctgctc tggctccgcc gctcgatcgg ggccaacgcg
      721 tacgcggagg tgcaggccta cctcgacctg gaccaggacc tggattcggt tttcgccgcg
      781 tcctaccgga agttcgtggg tgtcgatctg cctcccgggg actatgccgg tacccgcgcc
      841 ctcttcggca cggtgccgct ctactacccc gcctacctct acgccaacat gttcgccacc
      901 caggtacgcg aggcgatgaa gaaggagttc ggcaccgacg atctgacccg ggaagcccgg
      961 gtggccccgt ggctcatccg aaacttctac ggaccgggac agagcgtgcc ctggcaggaa
     1021 aaggtccggc gggccaccgg ccggccgctc gactcgcggg cgctggtgga g
//
LOCUS       DATIFF010000293         1341 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1424513, whole genome shotgun sequence.
ACCESSION   DATIFF010000293 DATIFF010000000
VERSION     DATIFF010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1341
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1424513"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1341
                     /gene="aceE"
                     /locus_tag="VLD58_04195"
     CDS             <1..>1341
                     /gene="aceE"
                     /locus_tag="VLD58_04195"
                     /inference="COORDINATES: protein motif:HMM:NF012670.4"
                     /note="E1 component; part of pyruvate dehydrogenase; forms
                     a complex with DlaT and LpdC; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HSB53527.1"
                     /translation="ETAEWLESLDGVIQEEGRRRARFLMLKLLERARERSVGVPGPTS
                     TDFINTIPPEREPWFPGDEHIERRIRAYVRWNAAIMVSRANRPEYGVGGHIATYASSA
                     SLYEVGFNHFFRGKDHLAPGPGGESGDQVFFQGHASPGIYARAFLEGRLGERQLDAFR
                     REGEPGGLPSYPHPRLMPDFWEFPTVSMGLGAIDAIYQARFNRYLLNRRIKDTSHSRV
                     WCFLGDGEMDEPEAVGALGVAAREELDNLIFVVNCNLQRLDGPVRGNGKIIQELESLF
                     RGAGWNVVKVVWGRDWDPLLARDVDGVLVHKMNTTPDGQFQTYSTSDGGYIREHFFGT
                     DARLRRMVKDLSDDDLRKLSRGGHDYRKLYAAYQAAVQHEGQPTVILAHTIKGWTLGK
                     DFEARNATHQMKKLTRDELKEFRDRLYLPIPDAVLDGELPPYYHPGPESEEIEYM"
BASE COUNT          231 a          457 c          461 g          192 t
ORIGIN      
        1 gagaccgccg aatggctgga gtcgctcgac ggggtgatcc aggaggaggg ccggaggcgg
       61 gctcgcttcc tcatgctcaa gctgctggaa cgcgcccgcg agcgctccgt cggcgtcccc
      121 gggccgacca gcaccgattt catcaacacc attccgccgg agcgggagcc gtggttcccc
      181 ggcgacgagc acatcgagcg gcggatccgg gcctacgtcc ggtggaacgc cgcgatcatg
      241 gtgagccgcg cgaaccggcc ggagtacggc gtcggcggcc acatcgcgac gtacgcgagc
      301 agcgccagcc tgtacgaggt cggcttcaac cacttcttcc ggggcaagga ccatctcgcc
      361 cccgggccgg gtggcgagtc cggcgaccag gtgttcttcc aggggcacgc ctccccgggg
      421 atctacgcgc gggcgttcct ggagggccgg ctcggcgagc gccagctcga cgcgttccgg
      481 cgggagggcg agcccggcgg gctgccgtcg tacccgcacc cgcgactcat gccggacttc
      541 tgggagttcc cgaccgtgtc gatgggcctg ggcgccatcg acgcgatcta ccaggcgagg
      601 ttcaaccgct acctgctcaa ccggcggatc aaggacacca gccacagccg agtatggtgt
      661 tttctcggcg acggcgagat ggacgagccg gaggcggtag gcgcgctcgg ggtcgccgcc
      721 cgcgaggaac tggacaacct gatcttcgtg gtgaactgca acctgcaacg cctggacggc
      781 ccggtccgcg gcaatggcaa gatcatccag gagctggagt cgctgttccg tggcgccggc
      841 tggaacgtcg tcaaggtggt gtggggccgc gactgggacc cgctgctcgc ccgcgacgtc
      901 gacggggtgc tcgtgcacaa gatgaacacc actcccgacg ggcagttcca gacctattcg
      961 accagcgacg gcggctacat ccgcgagcac ttcttcggca ccgacgcccg gctgcgccgg
     1021 atggtgaagg acctctccga cgacgacctg cgcaagctgt cccggggcgg ccacgactat
     1081 cgcaagcttt acgcggccta ccaggccgcc gtccagcacg agggccaacc gacggtcatc
     1141 ctcgcgcaca ccatcaaggg ctggaccctg ggcaaggact tcgaggcccg caacgccact
     1201 caccagatga aaaagctcac cagggacgag ctgaaggagt tccgcgaccg gctctatctg
     1261 cccattccgg acgcggtgct ggacggtgag ctgccgccgt actaccaccc ggggccggaa
     1321 tcggaggaga tcgagtacat g
//
LOCUS       DATIFF010000294         1965 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_808436, whole genome shotgun sequence.
ACCESSION   DATIFF010000294 DATIFF010000000
VERSION     DATIFF010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1965)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1965)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1965
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_808436"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..686
                     /locus_tag="VLD58_04200"
     CDS             <1..686
                     /locus_tag="VLD58_04200"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HSB53528.1"
                     /translation="EIFGLGRELQDVLAGRPTGRPTKLHVGIAEQVPKLMAHELLAPV
                     LKLAEPPQLICREDKLERLFGDLAAHNLDVVISDTPLSHQAKGKAFNHLLGETGVTIF
                     GAPALAEQYRRGFPGSLDGAPFILPVEGTTLRRTLDAWFERERVAPRVMGEFSDSALL
                     KAFGQGGMGLFAGPSAIAGEIRRQFEVKALGELGGLRESFYAVTVERRLRHPAVIAIS
                     EAARHRIFA"
     gene            complement(755..1258)
                     /locus_tag="VLD58_04205"
     CDS             complement(755..1258)
                     /locus_tag="VLD58_04205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53529.1"
                     /translation="MLAFATAALLLAGVPDPDRFAGTSLQESQRRVLQAWHTGLESVN
                     GYYHWATHSVRLDRYIAQQQAVQVGKDLEAARAAFTEMAGMLTPSARATVTGEVTTVN
                     DALAKADAQLSKLRMESGAALPSRTEARFLTAELYRSLSTIHQAQLAIGQKLGIAPEE
                     RTRDRAR"
     gene            complement(1299..1736)
                     /locus_tag="VLD58_04210"
     CDS             complement(1299..1736)
                     /locus_tag="VLD58_04210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53530.1"
                     /translation="MPTLSAVPLTSLPTAADPGRTALAVTQAARNAASDAFRAASIQL
                     THGRCSPARAVRSLDLRVEEARDCFETMIAGHPVARLAHVSAEVDIVREAFGKALAAL
                     TTLRCEAASYAPRPVEVRFLSAQVYSAMAHIQATVASIRRKLS"
BASE COUNT          298 a          616 c          741 g          310 t
ORIGIN      
        1 aagagatctt cgggctcggg cgggagctcc aggatgtact ggccgggcgc cccaccggcc
       61 ggcccaccaa gctgcacgtc gggatcgccg agcaggtgcc gaagctcatg gcccacgagc
      121 tgctcgcgcc ggtgctcaag ctggcggagc cgccgcagct catctgccgg gaagacaagc
      181 tggagcggct gttcggcgac ctggccgccc acaacctcga cgtggtcatc agcgacactc
      241 cgctttcgca ccaggcgaag gggaaagcgt tcaaccacct gctcggcgag accggggtca
      301 cgatcttcgg ggcgccggcg ctagcggagc agtaccggcg ggggttcccg ggctcgctcg
      361 acggcgcccc gttcatcctg ccggtggagg ggacgacgct ccgccggaca ctcgatgcgt
      421 ggttcgagcg ggaacgggtg gcaccgaggg tcatggggga gttcagcgac agtgcgctgc
      481 tcaaggcctt cgggcagggc gggatgggac tgttcgcggg gccgagcgcg atcgccgggg
      541 agatccgccg ccagttcgag gtgaaggcgc tgggcgagct gggggggctc cgggaatcgt
      601 tctatgcggt gacggtggag cggcggctcc ggcacccggc tgttatcgcc atctcggaag
      661 cggcgaggca ccggatcttc gcctgaagcg cccggaaggc cttgaagcca acgaggcccg
      721 tggagctgat ccacgggcct cgtcgttctg ccggtcagcg ggcgcggtcc cgggtacgct
      781 cctcgggcgc aatcccgagc ttctggccga tggcgagctg ggcctggtga atggtgctga
      841 gcgagcggta gagctccgcc gtcaggaacc gggcctcggt gcggctgggt aacgcggcgc
      901 cggactccat ccgcagcttg gagagctggg cgtcggcctt ggcgagggca tcgttgacgg
      961 tggtcacctc tccggtcacg gtggcgcggg cactgggcgt cagcatcccc gccatctcgg
     1021 tgaaggcggc gcgggcggcc tcgagatcct tcccgacctg caccgcctgc tgctgggcga
     1081 tgtagcggtc gaggcgcacg ctgtgggtgg cccagtggta gtacccgttc acgctctcga
     1141 gccccgtgtg ccaggcctgg agcacgcggc gctggctctc ctgcaggctg gtaccggcga
     1201 agcgatcggg gtcaggcacg cccgcgagca gcagggcggc ggtggcgaac gcaagcattg
     1261 tatgcctcca agaatggaat ggttgtgagt gacatcagct aggacagctt gcgccggatc
     1321 gacgcgacgg tggcctggat gtgggccatg gcgctgtaga cctgagcgct gaggaaccgc
     1381 acctcgaccg gccggggcgc gtagctagcc gcctcgcagc gcagggtggt gagggcggca
     1441 agggccttcc cgaacgcctc gcggacgatg tccacctcgg cgcttacgtg ggcgagccgc
     1501 gccaccgggt ggcccgcgat catcgtctcg aagcagtcgc gcgcttcctc gacgcgcagg
     1561 tcgagcgagc ggaccgcccg agcgggcgag cagcgcccgt gggtgagctg gatggacgcg
     1621 gcacggaagg catcgctggc ggcgttacgc gccgcctggg tgacggccag cgccgtccgg
     1681 ccgggatcgg cggcggtggg cagggacgtc agcgggacag cagacagggt cggcatgagc
     1741 cgcctccggg tgatcggtcg ttggcggggg cgccgggtgc ggcgctcgcc cgtgggagcc
     1801 aatctttcac ccggtcgagc tatcgacaat ttgaactttg cgcgctttca catagaccat
     1861 acctcaaatg cagtccccag ggcctagata ggtttcgcct atgatttagt tgcaaggata
     1921 cgatttgatc taatcgtgcc aggaccctag gttcggcgcc atgct
//
LOCUS       DATIFF010000295         1737 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2040304, whole genome shotgun sequence.
ACCESSION   DATIFF010000295 DATIFF010000000
VERSION     DATIFF010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2040304"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            241..405
                     /locus_tag="VLD58_04215"
     CDS             241..405
                     /locus_tag="VLD58_04215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53531.1"
                     /translation="MMMFVTTLAVGAVAGFMMEKQFGSNLIRWSRMQRMRARVLRRQG
                     VSPWRAWFED"
     gene            complement(402..1487)
                     /locus_tag="VLD58_04220"
     CDS             complement(402..1487)
                     /locus_tag="VLD58_04220"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HSB53532.1"
                     /translation="MEQIETHPRLRVRQESPLNAEPEPGALIESFRTPNELFFVRNHG
                     DIPEVDAGAYRLTVDGLVETPLSLSLADLRRFPRMTIGATLQCAGNRRRELIEVAPIP
                     NELPWDSEAVSNAEWSGVPLREALAAAGPKSGALHVAFLGLDETERHGHRFQFGGSIP
                     LEKAMHPEVLLADRMNGEPLPRAHGAPLRVVVPGYIGARSVKWISRITLRETPSDNYF
                     QAKAYRLFPASVGPDNVDWETGMMLGESPVNSVICSPVSGDRLPAGRVTVRGWAVAGG
                     GREIARVDVSTDGGGTWKTAELGPGESGWTWRFWQAPLDLAPGEHEILCRAFDSAAQT
                     QPAHPSQVWNFKGYANNAWHRVRVVAP"
     gene            complement(1499..>1737)
                     /locus_tag="VLD58_04225"
     CDS             complement(1499..>1737)
                     /locus_tag="VLD58_04225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53533.1"
                     /translation="EGEDGVCRFEGRGSVKATAGSVGALIPPFEHHVLANACPDRPSL
                     TLHVYGGEMTHCDIFQPEAAGTYRRCSRQLSYDE"
BASE COUNT          255 a          567 c          640 g          275 t
ORIGIN      
        1 agagggaggg agttagccga gtttgtcttg agccccctct ctcccggtcg gggggagtgc
       61 ggtgggagag agggggttgg gggagtgagg ggttgacggg ggaagagggg ccgtttagac
      121 ttagttctac aaattagcca aaggggcggg gtaggacttg cactgccccc tgcgaagcag
      181 tccccgcggg ggttggcgtt gggccggaaa attttgtctt ttttaccgag gtaggacgcg
      241 atgatgatgt ttgtcaccac gttggccgtc ggcgccgtcg ccggcttcat gatggagaag
      301 cagttcggct cgaatctgat ccgctggagc cggatgcagc ggatgcgcgc ccgcgtcctg
      361 cgccgccagg gcgtgagccc gtggcgggcg tggttcgagg attagggagc caccacccgc
      421 acccggtgcc acgcgttgtt cgcgtacccc ttgaagttcc acacctgcga ggggtgagcg
      481 ggctgggtct gggcggcgct gtcgaaggcg cggcagagga tctcgtgctc tcccggcgcg
      541 aggtcgagcg gcgcctgcca gaagcgccag gtccagccgc tttcgccggg ccccagctcc
      601 gcggtcttcc aggtcccgcc gccgtcggtc gagacgtcca cgcgggcgat ctcccggccg
      661 ccgcccgcca ccgcccagcc gcgcacggtc acccggccgg ccggcagccg gtcgcctgag
      721 accggcgagc agatcaccga attgaccggc gactcgccga gcatcatccc cgtctcccag
      781 tccacgttgt ccgggcccac cgaggccggg aagagccggt aggccttggc ctggaagtag
      841 ttgtccgagg gcgtctcccg cagggtgatc cgcgagatcc acttgacgct gcgggcgccg
      901 atgtagcccg gcaccaccac gcgcagaggc gcgccatggg cgcgcggcag cggctcgccg
      961 ttcatcctgt ccgccagcag cacctccggg tgcatggcct tctccagcgg gatggatccc
     1021 ccgaactgga agcggtggcc gtggcgctcg gtctcgtcga ggccgagaaa ggcaacgtgg
     1081 agcgcgccgg atttcggccc cgccgcggcc agtgcctcgc gcagggggac ccccgaccat
     1141 tcggcgttgc tgaccgcctc ggaatcccag gggagctcgt tggggatcgg cgccacctcg
     1201 atcagctcgc ggcggcggtt gcccgcgcac tgcaaggtcg ccccgatcgt catccggggg
     1261 aagcgccgga gatccgccag cgacagcgag aggggggtct ccaccaggcc atcgaccgtc
     1321 aggcggtagg ccccggcgtc cacctcgggg atgtcgccgt gattgcggac gaagaacagc
     1381 tcgttggggg tgcggaacga ttcgatcagg gcgccgggct cgggctcggc gttgagcggc
     1441 gactcctgcc ggacccgcag acgggggtgg gtttcgatct gctccatgat ccaggacgct
     1501 attcgtcgta gctgagctgg cgcgagcatc gccggtacgt gccagccgcc tcgggctgga
     1561 agatgtcgca gtgggtcatc tcaccgccgt agacgtgcag ggtgagcgag gggcggtcag
     1621 gacaagcgtt cgccagcacg tggtgctcga agggcgggat cagcgcgccg acggagccgg
     1681 ccgtggcctt caccgagccc cggccctcga agcggcagac gccgtcctcc ccctcct
//
LOCUS       DATIFF010000296         2129 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_808584, whole genome shotgun sequence.
ACCESSION   DATIFF010000296 DATIFF010000000
VERSION     DATIFF010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2129
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_808584"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1139
                     /locus_tag="VLD58_04230"
     CDS             <1..1139
                     /locus_tag="VLD58_04230"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HSB53534.1"
                     /translation="TGMASPIVYNLTRATIHVRSVPPGNMFPGNVGYISLNPVSETSS
                     PELRREITALLAKGMKSLVLDLRGNPGGLLDQGVKVADLFLNKDQEIVSTRGRARGST
                     KTFVDQASQEWPSLPIVVLVNDGTASAAEIISGALQDHDRAVVVGVPTFGKGLVQTLF
                     PFSDNTALKLTTGRWYTPSGRTIQRKARSEEDQAHIAAVEAGQEKPDSAAADTANRPT
                     YKTDAGRLVRGGGGIVPDLVIRQDTLTDAERAFATALASKFAEYRDALTSTALQIKTD
                     KSVTSEEFSVTAGMRSEVLRRMRSKGVQLADSTFSKAEPLISEQLGYEIARYVFGRPA
                     EFRRRSRDDKQMQVALDLLHKAQTPKDLMSLATVQGTEAPARRN"
     gene            1185..1970
                     /locus_tag="VLD58_04235"
     CDS             1185..1970
                     /locus_tag="VLD58_04235"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HSB53535.1"
                     /translation="MLVGLLSALAGIGGGVVMVPFLYLVYARSGVSHSAQTVVAHATS
                     LGVAFVASTVGTWRYARAHAIHWRTAMTYAVPGILSAFLTARVLTKVDQASWIRALFG
                     TFLVLTAADLVRRARQSAEPAPEREAHSSIWLVLVGFVGGGLSALLGIGGGLIAVPVL
                     LYVGRLPVKAVAPTALAGVCLTTLSGGLGYLTAGDGPSVSGLMAGFMDLRMALPLALG
                     TLVTVPIGVKVQRRSSAPALYWIFAALFGAIGLELIREWLGRG"
BASE COUNT          309 a          696 c          776 g          348 t
ORIGIN      
        1 ggaccggcat ggcttcgccg atcgtctaca acctcacccg cgcgaccatc cacgtccgct
       61 cggtgccgcc gggcaacatg ttccccggca acgtcggcta tatctcgctc aatccggtct
      121 ccgagacttc gagccccgag ctccggcgcg aaatcacggc cctgctcgcc aaggggatga
      181 agagcctggt gctggacctc cggggcaacc cgggcgggct gctcgaccag ggcgtgaagg
      241 tggccgatct cttcctcaac aaggaccagg agatcgtctc cacccgcggc cgggccaggg
      301 ggtcaaccaa gaccttcgtg gaccaggcga gccaggaatg gccgtctctg ccgatcgtgg
      361 tgctggtgaa cgacggcacg gcgtcagcgg ccgagatcat ctcgggcgcg ctgcaggatc
      421 atgaccgggc cgtggtggtc ggtgtgccga ccttcggcaa gggcctggta cagaccctgt
      481 tccccttctc ggataacacc gcgctcaagc tgaccaccgg gcgctggtac acgcccagcg
      541 ggcggaccat tcagcggaag gcccggagcg aggaagacca ggcccacatt gcggcggtcg
      601 aggcggggca ggagaagccc gacagtgccg cggccgatac ggccaaccgg ccgacctaca
      661 agaccgacgc cggccgcctg gtgcggggtg gcggtggcat cgttcccgac ctggtgatcc
      721 ggcaggacac cctcaccgac gcggagcggg ccttcgcgac ggcgctggcg tcgaagttcg
      781 cggaataccg tgacgcgctg acgtcgaccg cgctccagat caagaccgac aagtcggtga
      841 cctcggagga gttcagcgtg acggccggga tgcggagcga ggtcctgcgc cggatgcggt
      901 ccaagggtgt gcaactggcc gactcgacgt tctccaaggc cgagccgctc atcagcgagc
      961 agctgggcta tgagatcgcc cgctacgtct tcggtcgccc ggccgagttc cgccgccgga
     1021 gccgcgacga caagcagatg caggtcgcgc tcgacctgct gcacaaggca cagacgccga
     1081 aggacctgat gtccctggcg acggtgcagg gaacggaagc gccggcccgc aggaattagc
     1141 cgatccctcc ggcgctggag gtccctgccg ccttcgccac cggattgctg gtgggcctgc
     1201 tctccgccct ggcggggatc ggcggtgggg ttgtgatggt gccgtttctc tatctggtgt
     1261 acgcccgctc gggcgtgtcc cattccgccc agactgtggt ggcccacgcc accagtctgg
     1321 gcgttgcgtt tgtggcctct acggtgggca cgtggcgcta tgcccgcgcc cacgcgatcc
     1381 actggcgtac cgcgatgacc tatgcggtgc cgggcattct ctcggcattt ctcactgcgc
     1441 gggtgcttac caaggtcgac caggccagct ggatccgggc cctgttcggc acgttcctgg
     1501 tcctgacggc cgcggacctg gtccggcgcg cgcgccagag cgccgaaccg gcgccggagc
     1561 gcgaggctca ttcctccatc tggctggtgc tggtgggctt cgtgggcggc gggctgtccg
     1621 ccctgctcgg aattggcggc ggcctcatcg cggtgccggt gctgctctac gtgggaaggc
     1681 tgcccgtgaa ggcggtggcg ccaaccgcgc ttgcgggagt gtgtctgacc accctctcgg
     1741 ggggcctcgg gtatctcacc gcaggtgacg gtccctcggt ctcgggcctg atggcggggt
     1801 tcatggacct caggatggcg ctgccgttgg cgctgggaac gctggtgacc gtgcccatcg
     1861 gggtgaaggt gcagcgccga tcgagcgcgc cggcattgta ctggatattc gcggcgctct
     1921 tcggagccat cgggctggaa ctgatccggg aatggctggg ccggggctga tgatcaccat
     1981 cgtgggtggc gggcgcatgg ggcggggtct ggccggggcc ctctcgcgcg ccggagagag
     2041 ggtgacgctc tggtccaggc gggaggcgac tggcgcggtg gacgaggcag tgggcggcgc
     2101 cagcaccgtg gtgctggcgg tgccggacg
//
LOCUS       DATIFF010000297         1178 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_501531, whole genome shotgun sequence.
ACCESSION   DATIFF010000297 DATIFF010000000
VERSION     DATIFF010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_501531"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..272
                     /locus_tag="VLD58_04240"
     CDS             <1..272
                     /locus_tag="VLD58_04240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011117168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HSB53536.1"
                     /translation="LAFLSGALASGLGYVLWYQALTGLSKITAAVVQLAVPILAAAGG
                     IAFLGEQVTSRLLLAGRLVLGGIGLVLLAHPGGPTASAIASEDSP"
     gene            complement(344..787)
                     /locus_tag="VLD58_04245"
     CDS             complement(344..787)
                     /locus_tag="VLD58_04245"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HSB53537.1"
                     /translation="MTATDDSAPVLVVRRQIAAQREKVFEAWLDSESLAHWMRPGDST
                     HATVSVDPRVGGGFRIVMEGPTHGAVEHRGEYLAIEPPSLLSFTWISRPTDYQPTVVT
                     IEFHERGTGTELVLTHRGLAPKAVEGHRKGWTDIVRLLDEALTRG"
     gene            complement(784..1137)
                     /locus_tag="VLD58_04250"
     CDS             complement(784..1137)
                     /locus_tag="VLD58_04250"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSB53538.1"
                     /translation="MDQVYGAIADPTRRAILGILAEGEATVGGLAERFPISLNGVSKH
                     VKVLERAGLVARTVHGREHRLRLNAEPLREASVWLEHYRTFWDSRLGALEAFLLKQER
                     GARSEQAQHPREEGR"
BASE COUNT          160 a          433 c          376 g          209 t
ORIGIN      
        1 tccttgcctt cctgtccggg gcgctggcct ccgggctcgg ctatgtcctc tggtaccagg
       61 cgctgacggg gctgtcgaag atcaccgccg ccgtcgtgca gttggcggtg cccatcctgg
      121 ccgcggctgg cggaattgcg tttctcggag agcaggtcac ttcccgcttg ttgctggccg
      181 gccggctggt actcggtggt atcggccttg tcctccttgc ccatcccggc ggtcccaccg
      241 cttcggccat cgcctcggaa gattctccgt agctcgccgc gcccggcggg tcctgcgggc
      301 gttcggcgga gcgcgtcggc cacgcgccgc tccgctccgc cggctagccc cgcgtcaacg
      361 cctcgtcgag caagcgcacg atgtcggtcc agcccttccg gtggccctcg accgccttgg
      421 gcgccaaccc ccggtgggtc aggaccagct cggttcccgt gccccgctcg tggaactcga
      481 tggtgacgac cgtgggctgg tagtccgtag gcctggagat ccaggtgaac gacagcaacg
      541 acggcggctc gatcgccagg tactcgccgc ggtgctcgac ggcgccgtgc gtcggcccct
      601 ccatcacgat ccggaatccg ccgccgaccc gcggatctac gctgaccgtg gcgtgggtgg
      661 agtcccccgg gcgcatccag tgcgccaggc tctctgaatc cagccacgcc tcgaacacct
      721 tctcccgctg cgccgcgatc tgccgccgca ccacgaggac gggcgccgag tcatcggtcg
      781 cggtcatcga ccttcctccc ggggatgttg tgcctgctcc gacctggcgc cgcgctcctg
      841 cttcaggagg aacgcctcca acgctccaag ccggctatcc cagaacgttc ggtagtgctc
      901 caaccacacc gatgcttcgc gcagcggctc ggcgttgagg cggagccggt gctctcgacc
      961 gtggacggtg cgcgcgacca gtccggcccg ctccaggacc ttcacgtgct tggagacccc
     1021 gttgagcgaa atggggaacc gctcggccag gccaccaacg gtagcctccc cttccgccag
     1081 gatccccagg atcgcgcggc gggtcggatc tgcaatagca ccatagactt gatccaacat
     1141 aaaatccgta ggtgtgcccg gggattgcgt tcaaccag
//
LOCUS       DATIFF010000298         1478 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1578361, whole genome shotgun sequence.
ACCESSION   DATIFF010000298 DATIFF010000000
VERSION     DATIFF010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1478
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1578361"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..363)
                     /locus_tag="VLD58_04255"
     CDS             complement(<1..363)
                     /locus_tag="VLD58_04255"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSB53539.1"
                     /translation="MLQDPAGTVEQRLRAAVESSPSGLLMTDAEGRIVLVNREIERLF
                     GYAREELLGKTVDLLVPENFRDIHPQYRAGFTSAPKIRAMGAGRELFGRHKDGHQVPV
                     EIGLTPVITEEGLFVLSSI"
     gene            complement(513..>1478)
                     /locus_tag="VLD58_04260"
     CDS             complement(513..>1478)
                     /locus_tag="VLD58_04260"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSB53540.1"
                     /translation="RAYQSWGIVEAEAREPCILKTGGLDFARRDSAIPLDAYASSMTA
                     EGVEFEHLDAREIMRRWPQFVLTDDCHGLYQAEGGIAMAARANEVHRRMAREHGATLV
                     DRSPVTAVRSVGGEVEVVAGGVGYRCRKLVVAAGPWSNTVLGMLGLTLPLEVTQEQVT
                     YYRSPHLREFEPGRFPVWIWMDDPCFYGFPVFGEPATKIAQDAGGRPVTAETRSFEPD
                     PENSARVEAWARTHLPRALGPVHYTKTCLYTLTPDRDFVIDRVPGHDNIAIAIGAGHA
                     FKFASVIGRILGELAVTGTTPSDIGAFSIERAILMEKNPRRSYMV"
BASE COUNT          221 a          490 c          521 g          246 t
ORIGIN      
        1 gatcgagctc aggacgaaca gcccctcctc ggtgatgacc ggggtgagcc cgatctccac
       61 cggcacctgg tggccgtcct tgtggcggcc gaacagctcc cgccccgcgc ccatcgcacg
      121 gatcttgggg gcgctggtga aaccggcgcg atactggggg tggatgtcgc ggaagttctc
      181 tggcaccagc aggtcgacgg tcttgcccaa cagctcttcc cgcgcgtagc cgaagagccg
      241 ctcgatctcc cggttgacca ggacgatgcg gccctccgcg tcggtcatga gcagaccgct
      301 cggggacgat tcgaccgccg cacgcaaccg ttgttcgacg gtcccggccg gatcctggag
      361 catggtacgg tgccgcagtg aggggttgtg ccggaggggt tatcggcgta gctggactcg
      421 ctgctcggtc cacgctaagg cacgagttga attcccgcca gtaggagacg ggattgttca
      481 acgttcggac aaagccgccg ggtgcggaat ccctacacca tgtaggaccg gcggggattc
      541 ttctccatca ggatcgctct ttcgatggag aaggcgccga tgtcgctggg ggtcgtgccg
      601 gtcacggcca gctcgccgag gatgcggccg atcaccgagg cgaacttgaa ggcgtgtccc
      661 gcgccgatgg cgatcgcgat gttgtcgtgt cccggcaccc ggtcgatcac gaagtcgcgg
      721 tcgggggtga gggtgtagag gcaggtcttg gtgtaatgca ccggccccag ggcgcggggc
      781 agatgggtac gggcccacgc ctcgacccgc gcgctgtttt cgggatcggg ctcgaagctc
      841 cgggtctcgg ccgtcaccgg ccggccgccg gcgtcctgcg cgatcttggt cgccggttcg
      901 ccgaagacgg ggaagccgta gaagcagggg tcgtccatcc agatccagac cgggaagcgc
      961 cccggctcga actccctgag gtgcgggctc cggtagtagg tcacctgttc ctgggtgacc
     1021 tccagcggca gagtgagtcc cagcatgccg agcacggtgt tcgaccaggg gcctgcggcc
     1081 accaccagct tgcggcagcg gtacccgacc ccgccggcca ccacctccac ctcgccgccg
     1141 acgctccgca ccgcggtcac cggcgagcga tcgaccaggg tagcgccatg ctcccgggcc
     1201 atgcggcgat gcacctcgtt ggcgcgggcg gccatcgcga tgccgccttc cgcctgatag
     1261 aggccgtggc agtcgtcggt gaggacgaac tgcggccagc ggcgcatgat ctccctggcg
     1321 tcgaggtgtt cgaactcgac gccttccgcc gtcatgctgc tggcgtaggc gtcgaggggg
     1381 atcgcgctgt cgcgccgggc gaagtccagg ccgccggtct tgaggatgca cggctccctg
     1441 gcttccgcct ccacgatgcc ccacgactgg taggcgcg
//
LOCUS       DATIFF010000299         1796 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1117977, whole genome shotgun sequence.
ACCESSION   DATIFF010000299 DATIFF010000000
VERSION     DATIFF010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1796
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1117977"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1505)
                     /locus_tag="VLD58_04265"
     CDS             complement(<1..1505)
                     /locus_tag="VLD58_04265"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSB53541.1"
                     /translation="MNLFRNRRFFSERLLSGAAVSGVLLFIFGVTAGAIWTINRVESA
                     VRDSARRTLTTVLATAHEAAKHWATREQGQAAAVAANRELGKVVEQAITSWQLTGKSG
                     PAGARIDSMLAQAVRTNGLAGYWIVGDQELPVHRWPETLSEQLPAAMQEAVAKALDGI
                     PSLSPFPGDTVAKAQLTAVAPIRDSKGQAMAVLALVLPAEQELDQVAEQSHYRSLSQT
                     YFFDRSGLILGSSAMSRVVQADPMLREPGSRELTRMAREAVRGQPGIDLDGYRDHRGV
                     RVVGAWEWDDQLGLGLAVETDVSEVYRVSNTARKAILIGLGMTLLLFSMVLLSVVQAR
                     RSAEAMSALQRRLAAVLETTTDPVCFADRSGRAIYLNDAGHALLGAGREKPARGAPPP
                     QWSQLLLRAETLAHAAANDSWAGESTILTADGREITLSQVILCHRQRDGEVDFYSTIV
                     RDITDRKQLERRLRDEKERAEVTLGSIGDAVVRTDAKGLVEYLNPVAEQLLG"
BASE COUNT          262 a          624 c          614 g          296 t
ORIGIN      
        1 cccagcagct gctccgcgac cgggttcagg tactccacca ggcccttggc gtcggtgcgc
       61 accaccgcgt cgccgattga gcccagcgtc acctcggccc gctccttctc gtcccggagc
      121 cggcgctcga gctgtttccg gtcggtgatg tcgcggacga tggtggagta gaagtcgacc
      181 tcgccatccc gttgccggtg gcagaggatg acctgcgaga gcgtgatctc gcgcccgtcc
      241 gccgtgagaa tggtgctttc ccccgcccag ctgtcgttgg cggcggcgtg cgccagggtt
      301 tcggcccgga gcaggagctg gctccactgc ggtggcggcg cgccccgggc cggcttctcc
      361 cggcccgcac ccagcagcgc gtggcccgcg tcgttcaggt agatggcgcg gcccgagcgg
      421 tcggcgaagc agaccgggtc ggtggtggtc tcgagcacgg ccgccaggcg gcgctgcagg
      481 gcggacatcg cttccgcgct gcgccgggcc tggaccacac tcaggagcac catcgagaag
      541 agcagcaggg tcatccccaa gccgatgagg atggccttcc gggccgtgtt gctcacgcgg
      601 tagacctcgc tcacatcggt ctccaccgcc aggccgagcc ccagctggtc gtcccactcc
      661 cacgcgccca ccacccgcac cccgcgatga tcccgatagc cgtcgagatc gataccgggc
      721 tggccccgca ccgcttcgcg cgccatgcgg gtgagctcgc ggctccccgg ttcgcgcagc
      781 atcggatcgg cctggaccac ccggctcatc gcgctgctgc cgaggatcag gccggagcgg
      841 tcgaagaagt acgtctggct cagcgatcga tagtggctct gctcggccac ctggtcgagc
      901 tcctgttccg ccggcagcac cagggcgagg accgccatgg cctggccctt ggaatcgcgg
      961 atcggagcga cggcggtcag ttgcgccttg gcgacggtgt cgcccgggaa aggactgagg
     1021 gagggaattc cgtcgagcgc cttggcgacc gcttcctgca tcgcggcggg gagctgttcc
     1081 gagagggtct cgggccagcg atgcaccggg agctcctggt cacccacgat ccagtatccg
     1141 gccagaccgt tagtgcgcac tgcctgagcc agcatggagt cgatccgggc gccggccgga
     1201 cctgacttcc cggtcagctg ccacgacgtg atcgcctgct ctaccacctt gcccagttca
     1261 cggttggcgg ccaccgcggc cgcttggcct tgctcccggg tggcccagtg cttggcggcc
     1321 tcatgggcag tggccagcac ggtggtcagg gtccgccggg cgctatcgcg gaccgcagat
     1381 tccacgcgat taatcgtcca gatcgccccg gccgttaccc cgaaaatgaa gagaagaacg
     1441 ccgctgaccg cggcgcccga gaggagtctt tcagagaaga accggcggtt cctgaacagg
     1501 ttcataccgc ccattgtgtc gtgtaagttg cgttcaggcg gtgatttggg acaccaagcc
     1561 cctcccgggg agaggggccg ccgtgggacc ctcggaggag ccggttgatc gaacctcggc
     1621 ctgccttggt ctggatgtcc tactgcccgg tgaggagttc ctgcacatac cgcgccggga
     1681 ccgcgtaaat gatgcggccg ttgctccccg gctggccggc gtacaggaca ccgatgacgc
     1741 tgccatcccg gtcgaagatg gggctgccgc tggcgccctg ggcgccatag ctgtcg
//
LOCUS       DATIFF010000300         2762 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_194936, whole genome shotgun sequence.
ACCESSION   DATIFF010000300 DATIFF010000000
VERSION     DATIFF010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2762
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194936"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..680)
                     /locus_tag="VLD58_04270"
     CDS             complement(<1..680)
                     /locus_tag="VLD58_04270"
                     /inference="COORDINATES: protein motif:HMM:NF014826.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HSB53542.1"
                     /translation="MVHLHLHTHFSFGLGVSSPDVLAAAAAERGFGALACTDTNGVYG
                     AVEFQRACEAAGVRPILGAHLVTDDEEAVALATDERSWAALCRAITRIHWAAGAARGV
                     TLSEAKGTCPNARPPRSAQGDSGSLSACLAPDRDGLILLSRDPAFLERVLRLSGPRDL
                     YAELLPGKERHAVLAAARRLGLPAAVTNAVVMAHPEDWARHRLLRAIHLNTTLSALTG
                     SAGTRPDRL"
     gene            925..1719
                     /locus_tag="VLD58_04275"
     CDS             925..1719
                     /locus_tag="VLD58_04275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53543.1"
                     /translation="MIEHLVTRFEAARLDVRRRDLRQREEAAIARLGEKTLAEGGARS
                     GRLAALSEEAAAVRGRLHAMGRSRGDSASTGSRQRIEALEQRLRQIHLTAGRLALALP
                     PTGAESEVLAIRVEMADATAERERLRSEGNRMVQETWIQIQAWVTPRAPALVTLLLAW
                     WVARGYAVSHTAAILDELGLSHNRRGAHLVSLTADTMLVQYALPLGVAAACAYLAHRL
                     AERVRTTVEHVRARSSQAIREAGAARLSPADEAGDPRAQRVTGKSR"
     gene            complement(1742..2128)
                     /locus_tag="VLD58_04280"
     CDS             complement(1742..2128)
                     /locus_tag="VLD58_04280"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HSB53544.1"
                     /translation="MRFMMLVIPKGYETAPPGAVPDAKLVEAMTKYNESLSKAGVMLS
                     GEGLHPPSMGARVNFSDGKPTVTDGPFTEAKEVLGGFWIIQVASKAEAIDWARRAPMP
                     DGDIIEIRQVQELSDFPPEIRKAAGH"
     gene            complement(2176..2586)
                     /locus_tag="VLD58_04285"
     CDS             complement(2176..2586)
                     /locus_tag="VLD58_04285"
                     /inference="COORDINATES: protein motif:HMM:NF024953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HSB53545.1"
                     /translation="MTSAVSQKSLWIGRGLSAIAVLFLLFDSAIKVVGIPPVVESFTR
                     LGIPVTLSRGIGVLELACLAVYVIPRTAIPGAILLTGFLGGAILAHVRVGDPLFSHIL
                     FPTYIGAFLWGGLLLRRRLRGLVLDLTAPSTSHP"
BASE COUNT          430 a          916 c         1029 g          387 t
ORIGIN      
        1 agacggtcgg gtcgggtacc cgcggagcca gtgagggccg acagcgtggt gttgaggtga
       61 atggcgcgga gcaggcggtg gcgggcccag tcctcggggt gcgccatgac gaccgcgttg
      121 gtgacggcgg caggaaggcc caaccggcgc gcggcggcca gcaccgcatg gcgctccttg
      181 cccggcagca gctcggcgta gaggtcgcgc gggccgctca gccggaggac gcgctcgaga
      241 aaggcggggt cgcgggagag caggatgagg ccgtcgcggt cgggagccag gcaggcggac
      301 agcgatcccg agtcaccctg agcggagcga gggggccgag cgttggggca tgtccccttc
      361 gcttcgctca gggtgactcc cctcgcggct ccggccgccc agtgaatccg cgtgatcgcc
      421 cggcacagcg ccgcccagct gcgctcgtcc gtggccaggg cgacggcctc ctcgtcgtcg
      481 gtgaccaggt gcgcgcccag gatcgggcgc acgccggcgg cctcacaggc gcgctggaac
      541 tcgaccgcgc cgtacacgcc gttggtgtcg gtgcacgcga gcgccccgaa cccccgctcg
      601 gcggcggcgg cggccagcac gtcgggactg gagacgccga ggccgaagga gaagtgggtg
      661 tggaggtgga ggtggaccaa gggcggagcg acctttgagc ttcggttttt gttcggtatc
      721 tccgccaatc taccctgtgg ggaggggccg tcaagccacc agcgggcttg cggaacgccc
      781 ttggccgggc ccgatcgccc ggctggggcg gtggggcggc cggccgggcc caccgagcca
      841 agcaaccgtc ccagttgagg ttaacggcaa attgcggctc gaggccttcg ctcgccacgg
      901 tccttgcgac agacccctcg tgccatgatc gagcacctgg tgacccggtt cgaggcggct
      961 cgcctcgatg tccgccggcg cgacctgcgc cagcgggagg aggccgcaat cgcgcgcctg
     1021 ggtgagaaga ccctggccga gggcggggcc cggagcggcc gcctggcagc actgtccgag
     1081 gaagccgcgg cggtgcgggg gcggttgcac gccatggggc gcagccgcgg cgactcggcg
     1141 tccaccggct ctcgccagcg catcgaggcg ctggagcaac ggctccggca gatccatctc
     1201 acggcgggac ggctggcgct ggcgctgcca ccgaccggcg ccgaaagcga agtgctcgcg
     1261 atccgcgtcg agatggccga tgcgacggcc gagcgggaac ggctgcgcag cgaggggaac
     1321 cgcatggtcc aggagacctg gatccagatc caggcgtggg tcaccccgcg agcgccggcg
     1381 ctcgtgaccc tgctgctggc gtggtgggtc gcgcgcggct acgccgtgtc gcataccgca
     1441 gccatcttgg acgagcttgg cctgagccac aaccgccggg gcgcgcacct ggtcagcctg
     1501 acggccgata ccatgctcgt gcaatacgcc ctgccgctgg gagtggccgc ggcatgtgcg
     1561 tacctggcgc atcggctggc cgagcgggta cgcaccaccg tcgagcacgt tcgggcacga
     1621 tcgagccagg ccattcgcga ggccggggcc gcacgactct cgccggctga cgaggcgggc
     1681 gacccgcgcg ctcaacgggt aacggggaag tcgcggtagt tccctgaaga tcggccttgg
     1741 atcagtggcc ggcagccttc cggatctccg gcgggaagtc cgacagctcc tgcacctgtc
     1801 gaatctcgat gatgtcgccg tcgggcatgg gcgcgcgcct ggcccagtcg atcgcctccg
     1861 ccttcgacgc cacctggatg atccagaatc ccccgaggac ctccttcgcc tcggtgaacg
     1921 gcccgtccgt cacggtgggc tttccgtcgg agaaattgac gcgagcgccc atggacggcg
     1981 gatgcagccc ttcgcccgac agcatcacgc cggccttgct cagggactcg ttgtacttcg
     2041 tcatcgcctc caccagcttc gcgtcgggca ctgcgccggg tggcgcagtc tcatagcctt
     2101 tcggaatgac cagcatcatg aaacgcatga tcgtgccttt ctccgcatgt gaggcgatgc
     2161 cggccgtggc cggcgtcagg gatgggacgt cgaaggggct gtgaggtcga gcaccagccc
     2221 ccgcaggcgg cggcgcagca ggagcccgcc ccacaggaag gccccgatgt aggtggggaa
     2281 caggatgtgg ctgaagagcg ggtcgccgac ccggacatgg gccagaatgg cgccgccgag
     2341 gaagcccgtc aggaggatgg cgccggggat cgcggtccgg gggatcacgt acacggcaag
     2401 gcaggccagc tcgaggactc cgatcccgcg ggagagggtg acggggatcc ccaggcgggt
     2461 gaacgactcc acgaccggtg ggatcccgac caccttgatg gcggaatcga acagcaggaa
     2521 caggaccgcg atcgcgctga gaccgcgtcc gatccagagt gatttctgcg agacggctga
     2581 tgtcatcgtg tcacctcctt ggggttgtgc gccgacctcc aggctctacc cggtacgtcg
     2641 aacgatcccc ctcgaaatcg acacgagcgg caggtgctca gggcttcacg atcttgcgtt
     2701 gccgggccca gccggggccg cgggcgagga ctttccggta gaccgggcac gacggaacgt
     2761 gc
//
LOCUS       DATIFF010000301        12913 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1271558, whole genome shotgun sequence.
ACCESSION   DATIFF010000301 DATIFF010000000
VERSION     DATIFF010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12913
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1271558"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            304..1155
                     /locus_tag="VLD58_04290"
     CDS             304..1155
                     /locus_tag="VLD58_04290"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HSB53546.1"
                     /translation="MISPEGTVLESEAPFDHWQVGKWNKEMEESAGKLAAELARGEPV
                     DLFASYAAPWSLEVAALVAGISQSSASDLLPLARKIFHAAAHATGPGSDPDAGAAAAG
                     LAQGLPPSALGVQTFVALSHTLPHLLTGMWHALLTHVSQLQFLRAEPRVFPQAMEELL
                     RFASPSRTVFRIALTRVQIGGVVIDQGDTVHLGLAAANHDPARFPNPGRLDFRRGQSG
                     HLAFGRGRHACAGAQLIRLAAAAATHALLDLPASIEAAGEPLWLDGAAIRGPASLPVI
                     LRPAVTG"
     gene            complement(1152..3044)
                     /locus_tag="VLD58_04295"
     CDS             complement(1152..3044)
                     /locus_tag="VLD58_04295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53547.1"
                     /translation="MPDAPFRLSLEQLRKQAKERLKLLRETQPAATLASVQFALAREH
                     GYESWPRLVHALVGGPNRLVQLEQLARDLVAAAGQNQEALQRLSEYTGTSYSLERLHL
                     RVLDWLADAAGPREARDWTLDDARHAVARRYGFDTWANLAAAMAEPEKGPATRSRSAP
                     FFDLDPVRGTIELRPPLTDADWEYLADVIEETGVTGVQANGQMTDAGLARLCQLTSLT
                     RLNLDGSQRVSDEGLFHLSQMPQLEELDLSGTHTRFTDAGLACLPELSRLRVFRACWA
                     PRITDAGVSRLAACHQLEHVNLLGSPTGDGAVAALAGKPALRQLHAGARLTDQGLTYL
                     HQIPAFRSWGGEAPRYDLMSFDAGPTFLLLDGPITDQGLRQLAGLEGVFGLTFFWHTR
                     ALTSAGLSALSVLPNLGMLGCQDALCDDVAMQHIGALPKLRMLMAQGTVAGDAGFVAL
                     SRSATLEHIWGRDSANLGNRGFEALATMPALKGMALSLVGVSDATLAALPSFPALTGL
                     VPMDVQDDAFIHIGRCAGLERLWCMYCRDTGDRATEQLAGLQHLRYYYAGRTRITDRS
                     LAVLGGIRSLEELEFWQTAGISNAGLSHLAALPRLRELSISGATGVTREGLKAIPGRV
                     RVQYRG"
     gene            complement(3200..4507)
                     /locus_tag="VLD58_04300"
     CDS             complement(3200..4507)
                     /locus_tag="VLD58_04300"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HSB53548.1"
                     /translation="MNQLEQFLSVASWHGPLDQARAMLAEDPSLPAASIHTAAVVGDE
                     ALVRQFIAADPAAVGALAGPHLGTPLVYLCLSKFLRLDRSRSEAFVRTATVLLDAGAD
                     PNGGFWTPEPNPEFETPLYGAAGVAHHAPLTRLLLDRGADPNDGEVAYHSPEGHDLDA
                     MQVVVETGRLTPASLALMLVRKCDWHDLEGVRYLLRHGASPNGRWGKAGFAAVLHAIE
                     RDNSLAIMEALLDHGADPTISREGLSGVARAARRGRGDLLALFERRGTSIALDGVDQL
                     IAACARNDGAAIEKLLRQSPRLADELRAMGGELLGHFAGTANSAGVERLLDLGVPIDA
                     TTQGDGYFDIAPGSTALHVAAWRAWHDTVKTLLRRGAPVNLPDGRGRTPLMLAVKACV
                     DSYWSERRSPESVAALLAAGAAADGVPTPSGYDEIDRLIAAAR"
     gene            complement(4590..6656)
                     /locus_tag="VLD58_04305"
     CDS             complement(4590..6656)
                     /locus_tag="VLD58_04305"
                     /inference="COORDINATES: protein motif:HMM:NF020683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose oxidase-like domain-containing
                     protein"
                     /protein_id="HSB53549.1"
                     /translation="MKSVRLLLLGVAVVLAQGCSDEEVSHPNTMAAATAPTHYQLTIQ
                     DSSSAASGAVLSNKGGIACTFQVTSLGTVKTGICSSRYKAGANVFLTATPSIGAMVSH
                     WSGCTPASDNPLSCQVRVNADATVKVTFAPKPNQYVLTVQGGAGGSGKVQSMPAGINC
                     TITAGTAGATGCKASYPAGQSVVLKATAASGSYLKAWSGAGCDVSGTGSGTGSGSCTV
                     SLSDTRSVVVSFETTLAQATKGAWGTPFAWPVVGIHASVLPNGKVLTFGRAGHNPALW
                     DPASPATFGSTTRPADFFCSGHVLLPDGRLFVAGGHAGADNFGIKTTYFYDFATNSWT
                     RGNDMRNGRWYPTTTVLPNGEVLTVSGGDTAGVMNTLPEVWQPDGAWRALTGAQISIA
                     YYSMMFVAPDGRVFAAGPAQGTRYFTTAGTGSLAVGPTSHFGSRDYGSAVMYDAGKIL
                     IVGGNMTPTASAEVIDLNAGSGAAWRTVASMTVGRRQLNATLLADGKVLVTGGTNSTG
                     FNVAPSDSRVLSAELWDPATEQWTTLARMSHQRVYHSSALLLPDGRVLSVGSGEPAAT
                     GLSDDYTAEIFSPPYLFKADGTPATRPAISSAPVSVGYGQGFTVTTPNASSITKVTWI
                     RLSSVTHSFNQNQRMNRLGFSVIGTGTLSVTAPANSRLSPPGHYLLFLVNSAGVPSVA
                     RIIRIG"
     gene            complement(6825..8123)
                     /locus_tag="VLD58_04310"
     CDS             complement(6825..8123)
                     /locus_tag="VLD58_04310"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSB53550.1"
                     /translation="MTESCDVVVVGAGAAGLAAARRLGEAGLSTILVEARARMGGRIY
                     TPEPGVELGAEFVHGRPTATLVLLEEAGVSLIETEGEAWAGAGGEFEPAAHRFDGLEP
                     LLALGRKLVRDISAAEFFRQAAREPELADMARWAMRLVEGFDAADPEQASLKAIIEEW
                     SSDAGMDSPQGRPEGGYGGLIAHLAMVLPGRVMRRLEWPASAVRWSKGKVIVECATGP
                     ASISARAAVITLPLGVLQAPADSLGAVRFLPALTSKGDALAHLRTGPVHKVVLHFRSA
                     FWRSLQGGKLRDAGFLFRGTGHFPTFWTALPSEEPTLTAWYGGPGALSISSASDEQVI
                     GYAMESVERLFGAAASVGASLTRAWVHNWQRDPFALGAYSYVGVDGSDARRALAEPVE
                     GTLFFAGEATDWGGEGATVAGALASGERAAKEVLDIIQPS"
     gene            complement(8120..8737)
                     /locus_tag="VLD58_04315"
     CDS             complement(8120..8737)
                     /locus_tag="VLD58_04315"
                     /inference="COORDINATES: protein motif:HMM:NF018984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABATE domain-containing protein"
                     /protein_id="HSB53551.1"
                     /translation="MTHATTFHWLGNLPCLDFVNTEAMADGERVDLLVGFGGLVGWLT
                     EAGFLTDAGAKAALERWEGKTEGASALRQAVAFRQGLRRIVERLSEGKSPPADEVELI
                     NRILAERTTHARLVRKAGGYALTQVAERESALQLLAPVADSAAWLLTEADLGLLRRCE
                     NPQCILYFYDTTRNGRRRWCSMAGCGSRAKAAAYYRRQRSGKRRS"
     gene            8864..9319
                     /locus_tag="VLD58_04320"
     CDS             8864..9319
                     /locus_tag="VLD58_04320"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSB53552.1"
                     /translation="MQPAVFRTGHVGLNVSDLARAKAFYSQAFGFEVLGESGDAARSW
                     AFLGRGSDIVLTLWRQSSGTFASDRPGLHHLSFQVDSVEQVQETERRLRKLGAKIHHG
                     GVVPHAEGRDSGGLYFEDPDGIRLEVFTPSGVGALASAPHGAAPTCGFF"
     gene            9328..10245
                     /locus_tag="VLD58_04325"
     CDS             9328..10245
                     /locus_tag="VLD58_04325"
                     /EC_number="1.-.-.-"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: protein motif:HMM:NF013412.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HSB53553.1"
                     /translation="MTSGPFHPGELAVQRQAGVAAMASRIGNGIHDAIPPAAADFLAD
                     RTWLVLATTDAHGRPWASVVSGPAGFATVLEGIGGESGVRLSTRPVQGDPLVANLGVA
                     RHVGLLAIDLRTRRRMRVNGRLVAASEEAIVLVADQVYSNCPKYIQRRVTDDPRAANG
                     EAPTAVRAAALTPEQREWIRMADTFFVGTTNPGEGADASHRGGAPGFVEVTGERIRWP
                     DYPGNMMFNTLGNIESSGMAGLLFPDFATGRALLVTGKARIDWPARSGAAIERAVELD
                     VEEVVELAGVFPERLALLDYSPHLPKPAG"
     gene            complement(10253..10726)
                     /locus_tag="VLD58_04330"
     CDS             complement(10253..10726)
                     /locus_tag="VLD58_04330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53554.1"
                     /translation="MARLTTLLNAAFPARTADGQRIVQAIAACGGDVPTADELAGQLG
                     FDNRHQMARAMMRAGLPPLEHVSGWAMVLGWTARAEQEGTTLCEVALETSRDPAVCYR
                     LVKRLTGKVWTEVTRLGSTWIISTIRQRYGFAPLTAAQMPTRRRSGDNERPLVKT"
     gene            11040..11510
                     /locus_tag="VLD58_04335"
     CDS             11040..11510
                     /locus_tag="VLD58_04335"
                     /inference="COORDINATES: protein motif:HMM:NF025484.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4288 domain-containing protein"
                     /protein_id="HSB53555.1"
                     /translation="MIASSRNLWYWAWLVQMTVPKRGRPGSGDAHVWRNLVLVQARSA
                     DEALAKAEAIGKSASGDAEGALLLDGQPAKSVFVGIADAGLVDFRLSDGVEVMFQMER
                     QTARHARGLARARPSLIARLKHEAAQLRASAAPAGRSLRLRGTGSSRPARAARA"
     gene            complement(11425..12342)
                     /locus_tag="VLD58_04340"
     CDS             complement(11425..12342)
                     /locus_tag="VLD58_04340"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSB53556.1"
                     /translation="MSIHSVRRTGRAVLLGTLLPFVTALAQQKPGDPPRQDQLIAADR
                     ALADSVMARGAGEGFAAVGAPDLVFLYPGAPVVAGRDAVRQLLLGQAALKSLTLRWVP
                     LHGEVSRDGSFGVTYGVTGIATSGGGEGPPIRFGKYLSAWRYDAGRWLLVAHVEVGLL
                     PGASYSAPEGFTVPPLAPVPASGPGAAFARADLDFAALAGKSGAPDAFAAFAATDAVT
                     FSGTGELNRGPQRIRQWLDGDDAAWSWRPVASGGASDLGFTVGESVITPKGGAPSYGK
                     YLTLWRREPGGKIRYLADGGSARPAPPMP"
     gene            complement(12377..>12913)
                     /locus_tag="VLD58_04345"
     CDS             complement(12377..>12913)
                     /locus_tag="VLD58_04345"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HSB53557.1"
                     /translation="GPMGIGVLWGRRELLDALPPYQSGSNAAHAVDFDSAEWSPGGLR
                     FGAGTPNVAGAIGMAAAIRFLTDIGFPALQQHEAELTAALVEELGRVPRLSIVGPPDS
                     RERICLCSFTLGAMDPDQVMGQLDQEGIAIRSGDLAALPLLRRFGVTRAARASLYLYN
                     TRAEVARLGEGLRRMVRS"
BASE COUNT         1987 a         4496 c         4366 g         2064 t
ORIGIN      
        1 cgtttgccag cagttgcttg atgacctccc gcagggcctg ctcgtgttcg ggcttgaggt
       61 cggatcgccg agggtcgaag ttgtacagta gaaagccgcc cgatgcattc gcgtcagctc
      121 cggaaaacgc ccggaacttt cccggtccgc tcgccatggt cgtcccctcg taggtgattc
      181 gccgaatctc cggtctcgcc gggaggcact ctgtcagcac ccgcattctt tgaacggtcc
      241 cggggggcct ggattctcag ctcctgggcg gatgtgtcgg cggcactggc tcaccccggc
      301 ctggtgatat cgcccgaggg gacggtcctc gaatccgagg cgccgttcga tcactggcag
      361 gtcggcaagt ggaacaagga gatggaggag agcgccggga aactcgcggc ggagctggcc
      421 aggggggagc cggtcgatct ctttgccagc tacgcggcgc cctggtccct cgaagtcgct
      481 gcactggtcg cgggaatcag ccaatcgagt gcgagtgacc tgctgccgct ggcgcggaag
      541 atctttcacg ctgcagccca tgccaccgga ccaggctccg acccggatgc cggagcggcg
      601 gcggcagggc tggcgcaggg gctcccccca tcggcgctcg gggtgcagac cttcgtcgcc
      661 ctgagccaca cgctgcccca cctgctcacg ggtatgtggc acgcgctgct gactcacgtg
      721 agtcagctcc agttccttcg cgctgagccc agggtttttc cgcaggcaat ggaagagctg
      781 ctccgctttg cctcgccatc ccgcacggtc tttcggatcg ccctgacccg ggtccagatc
      841 ggcggggtcg tgatcgatca gggcgacacg gtgcacctcg gtctcgccgc ggccaatcat
      901 gaccccgccc gattccccaa ccccggccgg ctcgacttcc gccgaggcca gagcgggcat
      961 ctggcgttcg gccggggccg gcacgcctgt gccggcgcgc agctgatccg gctcgcagcc
     1021 gccgccgcca cgcatgccct gctcgacctg cctgcttcga tcgaagccgc cggtgaaccg
     1081 ctctggctcg atggcgcagc catccgcggt cccgcctcgc tcccggtcat cctccgtccg
     1141 gcagtcaccg gctagccgcg atactggacc cgcactcttc ccgggatcgc cttgagtccc
     1201 tcgcgggtga cgccggttgc cccgctgatg ctgagctccc gcagacgcgg cagtgccgcc
     1261 aggtgggaga gtccggcgtt gctgatgccc gcggtctgcc agaactccag ctcctccagc
     1321 gaccggatcc cgcccagcac cgcgagactc cggtcggtga tcctggtccg gccggcgtag
     1381 tagtaccgga ggtgctggag gccggcgagc tgctcggtgg cccggtcccc agtatcgcgg
     1441 cagtacatgc accagagccg ctcgagtccc gcgcatcgcc cgatatgaat gaaggcatcg
     1501 tcctgcacat ccatcggcac cagaccggtg agtgccggaa acgacggcag tgccgcgagc
     1561 gtcgcatcgc tcactccgac caggctgagc gccatgccct tgagcgccgg catcgtcgcg
     1621 agcgcctcaa atccccggtt ccccaggttc gccgaatccc ttccccagat gtgctccagt
     1681 gtggcggagc ggctcagcgc cacgaacccg gcgtctcctg ccacggtccc ctgtgccatc
     1741 agcatgcgca gcttgggcag cgcgccgatg tgctgcatgg cgacgtcgtc gcagagcgca
     1801 tcctggcagc cgagcatccc gaggttgggt aacacgctca gggccgatag gccggccgag
     1861 gtgagtgcgc gggtgtgcca gaagaaggtc aggccgaaca caccctcgag cccggcgagc
     1921 tgccgcagtc cctggtcggt gattgggccg tcgagcagga gaaaggtggg accggcatcg
     1981 aagctcatga ggtcgtagcg gggcgcttcc ccgccccacg agcgaaaggc cgggatctgg
     2041 tgcaggtagg tgaggccctg gtcggtcaaa cgagcgcccg cgtggagctg gcggagcgcc
     2101 ggtttccctg ccagggccgc gaccgcgccg tctcccgtgg gactgccgag caggttgacg
     2161 tgctccagct gatggcacgc ggcaaggcgg gaaactcctg cgtcagtaat gcgcggagcc
     2221 cagcaagccc tgaagactcg gagccgggac agttcaggga ggcatgcgag tccggcgtcg
     2281 gtgaaacggg tgtgggtccc gctcaggtcc agctcctcga gctgcggcat ctgtgacaga
     2341 tggaacagcc cctcgtcgct cacccgctgt gacccgtcga ggttgagccg ggtgagcgag
     2401 gtgagctggc agaggcgcgc gaggccggca tcggtcatct gcccgtttgc ctgcactccc
     2461 gtcactccgg tctcctcgat cacgtcggcc agatactccc agtcggcgtc cgtgagcggg
     2521 ggccggagct cgatggtgcc ccgcaccggg tcgagatcga agaagggcgc ggacctgctc
     2581 ctcgtcgccg gtcccttctc cggctccgcc atcgcggcgg cgaggttggc ccaggtgtcg
     2641 aacccgtacc ggcgcgccac ggcatgccgc gcgtcgtcga gtgtccagtc gcgcgcttcc
     2701 cgcggcccgg cggcgtcggc caaccagtcg agaacccgga ggtgcagccg ctccaggctg
     2761 taagaggtgc cggtgtattc gctgaggcgc tggagcgctt cctgattctg acccgcggcc
     2821 gccacgaggt cccgggccag ctgctcgagc tgcaccaggc ggttgggccc gccgacgagc
     2881 gcgtgcacca ggcgcggcca gctctcgtag ccgtgctcgc gggccagcgc gaactggacc
     2941 gacgccaggg tcgccgcggg ctgggtctcc cgcagcagct tcaggcgttc cttggcctgc
     3001 ttgcgaagtt gttcgaggga aagacggaag ggtgcgtcgg gcatgagcga tctcctttca
     3061 gagccgcccg ggtccgctgt ctcgggctga aagaagatcg ggaattgtga ctgcgcacag
     3121 ctcaggtggg ctctgccctt cccgcggacc ggaggcgccc tggacgccag cctcacggta
     3181 gcagagaggg cggcggcggt caacgcgccg cggcgatcag ccggtcgatt tcgtcgtacc
     3241 ccgagggggt gggcacaccg tcggccgcgg cgcctgcggc cagcagcgcg gccaccgatt
     3301 cgggcgagcg ccgttccgac cagtaggaat cgacacacgc cttcaccgcc agcatcagcg
     3361 gcgtccggcc tctgccgtcc ggcagattga ccggtgcgcc ccggcggaga agcgtcttca
     3421 ccgtgtcgtg ccacgcgcgc cacgccgcca cgtgaagggc ggtgctgccg ggagcgatgt
     3481 cgaagtatcc gtctccctgg gtagtcgcgt cgatcggcac gcccagatcc agcagccgct
     3541 cgaccccggc gctgttggcg gtacccgcga agtggccgag cagctcaccg cccatggcgc
     3601 ggagttcgtc ggccagcctc ggcgattgtc tgagcaactt ctcgatcgct gcgccatcgt
     3661 tccgggcgca ggccgcgatc agttggtcca caccgtcgag cgcgatgctg gtcccgcgcc
     3721 gctcgaagag cgccagcagg tcgccgcggc cgcgccgtgc ggcccgggcc acaccggaga
     3781 gtccctcccg cgagatcgtc gggtccgcgc cgtggtccag cagcgcttcc atgattgcga
     3841 ggctgttgtc ccgttcgatc gcgtggagca ccgctgcgaa tcccgctttg ccccagcgcc
     3901 cgttggggct ggctccgtgc cggaggagat agcgcacccc ctcgagatcg tgccagtcgc
     3961 acttccggac cagcatcagg gccaggctcg cgggagtgag ccggccggtc tcgaccacca
     4021 cctgcatcgc gtcgaggtca tggccctcgg gcgagtgata cgccacttcc ccatcattcg
     4081 ggtccgcgcc ccggtcgagc aggagccggg tcagcggggc gtgatgcgcc actcccgcgg
     4141 ctccgtacag cggggtctcg aactccgggt tcggctcagg ggtccagaag ccgccgttgg
     4201 ggtcggcgcc ggcgtcgagc agcaccgttg cggtccgcac gaaggcctcg ctcctggacc
     4261 gatcgaggcg gaggaacttc gagagacaga gatacaccag cggggtcccg aggtgcggac
     4321 cggccagcgc gccgaccgct gcggggtcgg ccgcgatgaa ctgccgcacc agcgcctcgt
     4381 cacccaccac cgccgcggtg tgaatcgatg ccgcgggcag cgaaggatcc tcggccagca
     4441 tggcgcgggc ctggtcgagg ggcccgtgcc agctggccac gctgagaaac tgttccagtt
     4501 ggttcatccg ggtcgcgaat tgaaggctgc agcagaagct gcgccccacg atgtaccgga
     4561 tgaaccagcg acccgcaagt actccggtgt cacccgatcc ggatgatcct cgcaaccgac
     4621 ggcacgccgg cgctgttcac caggaacagg agatagtgcc ccggcggtga cagcctgctg
     4681 ttggccggcg ccgtcaccga cagggtgccg gtcccgatca cactgaagcc gagccggttc
     4741 atcctctggt tctggttgaa cgaatgggtg accgacgaga gccggatcca ggtcaccttc
     4801 gtgatactcg aggcattcgg cgtggtgacc gtgaagccct ggccgtaccc gacgctcacc
     4861 ggcgcactcg agatcgcggg ccgcgtcgcc ggcgtgccat ccgccttgaa cagatacggc
     4921 ggcgagaaga tctcggcggt gtagtcgtcg ctcaggccgg tcgccgccgg ttcaccgctg
     4981 ccgaccgaca gcacccgccc atccggcagc agcagcgccg aggagtgata gacccgctgg
     5041 tgcgacatcc gggccagtgt ggtccactgc tcggtcgccg gatcccagag ttcggccgag
     5101 agcacccggc tgtcgctggg cgcgacgttg aaaccggtgc tgttggtgcc accggtcacc
     5161 agcaccttgc catcggccag cagcgttgcg ttgagctggc gccgccccac cgtcatcgag
     5221 gccaccgtcc gccacgccgc ccccgaaccc gcgttgagat cgatcacttc cgcgctcgcg
     5281 gttggcgtca tgttcccgcc cacgatcagg atcttgccgg cgtcgtacat caccgccgaa
     5341 ccgtagtccc gcgagccgaa gtgactcgtg ggccccactg cgagcgagcc ggtgccggcc
     5401 gtggtgaaat agcgggtgcc ctgtgccggg ccggccgcga agacccgccc atcgggggcc
     5461 acgaacatca tcgagtagta ggcgatgctg atctgtgccc cggtgagcgc ccgccaggcg
     5521 ccatcgggct gccagacttc cggcagggtg ttcatgacgc ccgcggtgtc gccgccgctc
     5581 accgtcagca cctcgccatt ggggagcacc gtcgtggtgg gataccaccg gccgttccgc
     5641 atgtcgttgc cgcgggtcca gctgttggtg gcgaagtcgt agaagtaggt ggtcttgatg
     5701 ccgaagttgt cggcgcccgc atggccaccc gcgacaaaca gccgtccgtc ggggagcagc
     5761 acgtgcccgc tgcagaagaa gtcggccggc cgcgtggtgc tgccgaacgt tgccggcgat
     5821 gccggatccc agagcgcggg attgtgaccg gcccggccga acgtcaggac cttgccgttg
     5881 ggcagcacac tcgcgtgtat gccaaccacc ggccaggcaa agggcgttcc ccaggcgcct
     5941 ttggtcgcct gggccagggt cgtctcgaag ctcaccacca ccgagcgggt gtccgataga
     6001 gacaccgtgc aggagccgct cccggtgccg ctgcctgtgc cactcacgtc acagcctgcc
     6061 cccgaccatg ccttgaggta gctgccgctc gccgccgtcg ccttgaggac gaccgactga
     6121 ccggctggat acgatgcctt gcagccggtg gccccggccg tgcccgccgt gatcgtgcag
     6181 ttgatgccgg ccggcatcga ctgcaccttg ccgctcccgc cggcgccccc ctggacggtc
     6241 aggacgtact gattcggctt gggtgcgaag gtgaccttca ccgtggcgtc ggcgttgact
     6301 ctgacctggc agctgagcgg attgtccgac gccggagtgc atccactcca gtggctcacc
     6361 atggcgccga tcgatggtgt tgcggtcagg aagacattcg cgccggcctt gtagcggctg
     6421 ctgcagatgc cggtcttcac ggttccgagg gaggtgacct ggaaggtgca ggcgatcccg
     6481 cccttgttgg aaagcacggc gccactggcg gcgctgctgc tgtcctggat ggtgagctga
     6541 tagtgagtcg gggcggtggc ggcggccatg gtgttcggat gcgagacctc ttcatccgaa
     6601 catccctgcg cgagcacgac cgccacgccc agcaggagga gacgtacgct cttcattgcg
     6661 ttggagcctc gaagcgacac gccccgaatg gccgggcgcg agatcggtcg cgggggtggg
     6721 gagtgctcga tgacccgcgg gacggggagt cctgaccgac aattgcgcgg agggaccgga
     6781 tgcggtatcg ctccggagtc ctagctcctc gacgggagga gatttcagct cggctggata
     6841 atgtcgagaa cctccttcgc ggcccgctcg ccgctggcca gcgccccggc gacagtggct
     6901 ccttctcccc cccaatcggt cgcctctccg gcgaagaaca aggtcccctc caccggttcg
     6961 gccagcgccc gccttgcgtc actgccgtcg acgcctacat agctgtacgc gcccagtgcg
     7021 aaagggtcgc gctgccagtt gtgaacccat gcccgcgtga gcgatgcgcc gaccgaagcg
     7081 gccgcgccaa agagccgctc gacactctcc atcgcgtagc cgatcacctg ctcgtccgac
     7141 gcggaggaga tcgacagggc gcccgggccc ccgtaccacg cggtgagggt aggctcttcg
     7201 gaggggagcg cagtccagaa ggtggggaaa tgccccgtgc cccggaacag gaatcccgca
     7261 tcccggagtt tcccgccctg cagtgatctc cagaacgccg agcggaagtg gagcaccacc
     7321 ttgtgcaccg ggcccgtccg gagatgcgcc agcgcatcac ccttcgacgt gagcgcaggc
     7381 aggaaccgca cggcgccgag cgagtccgcc ggcgcctgaa gcacgccaag gggaagggtg
     7441 atgactgcgg cccgggcgct gatcgacgcg gggccagtgg cgcactccac tatcaccttg
     7501 cccttcgacc accgcaccgc actcgccggc cactccagtc gccgcatcac ccgaccgggc
     7561 aggaccatcg cgaggtgcgc gatgagtcct ccgtagcccc cctcgggtcg accctgcggg
     7621 gaatccatcc cggcgtcgct cgaccattcc tcgatgatgg ccttgaggct cgcctgctcc
     7681 ggatcggcgg catcgaaccc ctccaccagg cgcatggccc agcgcgccat gtcggcgagc
     7741 tccggctccc tggccgcctg acgaaagaac tcggctgcgg agatgtcgcg gaccagcttt
     7801 cgccccagcg cgagcagcgg ctccaggccg tcgaaccgat gcgcggccgg ctcgaactct
     7861 ccccccgcac cggcccacgc ctcgccctcg gtctcgatca acgagacgcc ggcctcctcg
     7921 agcaacacca gcgtcgccgt tggccggccg tggacgaact cggccccgag ctcgacgccc
     7981 ggctccggag tgtagatgcg cccacccatg cgggcacgcg cctcgaccag gatggtcgag
     8041 agcccggcct cacccagacg gcgggcggcc gccagtcccg ccgcgcccgc accgaccacg
     8101 acgacgtcgc agctttcggt cacgagcgcc gctttccgct ccgctgccgc cggtagtagg
     8161 ccgccgcctt tgcgcggctg ccgcaaccgg ccatgctgca ccagcgccgc ctgccattcc
     8221 gggtggtgtc gtagaagtag aggatgcact gcgggttctc gcagcgccgg agcaggccga
     8281 gatcggcttc ggtgaggagc caggcggcgg aatcggccac cggtgccagg agctggagcg
     8341 ccgattcccg ctcggcgacc tgggtcaggg cgtagcctcc tgccttccgc accaggcggg
     8401 catgggtagt ccgctcggcg aggatccggt tgatcagctc gacctcgtcg gccgggggcg
     8461 acttcccctc gcttagccgc tccacaatac gccggagccc ctgccggaag gccactgcct
     8521 gccgcagagc gctcgccccc tcggtctttc cctcccaccg ctcgagggcg gccttcgccc
     8581 cggcgtcggt gagaaacccg gcctccgtga gccagcctac cagtcccccg aaccccacca
     8641 ggaggtctac ccgttcgccg tcggccatcg cctcggtgtt cacgaaatcg aggcagggaa
     8701 ggttgcccag ccaatggaag gtcgtcgcgt gcgtcatggg gcgaaacata gcggtggaac
     8761 tattaccagc aaatacccat ttgactggtg agaacgctca tgttaccatc taatgacacg
     8821 tttgatggtg ataactgtct ttccactctt ccgggaggta tcgatgcaac ctgctgtctt
     8881 ccgcaccggc catgtcggac tcaacgtgag tgatctggcc cgcgccaagg cgttctacag
     8941 ccaggcgttt ggcttcgagg tcctgggcga atcgggcgac gccgccagga gctgggcctt
     9001 tctcgggcgt ggctctgaca ttgtcctgac cctctggcgc cagagcagcg gtacctttgc
     9061 ctccgaccgg cccggcctgc accacctctc attccaggtc gactcggtgg agcaggtgca
     9121 ggagaccgag cgtcggctcc ggaagctggg cgcgaagatc caccatggcg gggtggtgcc
     9181 gcatgccgag gggagggatt cgggcggcct ctacttcgag gatcccgacg ggatccggct
     9241 cgaagtgttc accccgagcg gagtgggtgc acttgccagc gcgccgcacg gcgccgcgcc
     9301 gacctgcggc ttcttctgag agattcgatg acctctggtc cttttcaccc cggcgagctg
     9361 gccgtgcagc gccaggccgg cgtggctgcc atggcaagcc gtatcggcaa cggcattcac
     9421 gacgcgattc cgccggctgc cgccgatttt ctggcggacc ggacctggct ggttctggcc
     9481 accaccgacg cacacggccg cccgtgggcc tcggtggtga gcggccccgc gggcttcgcc
     9541 accgtgctcg aaggcatcgg gggagagagc ggcgttcgcc tgtcgacccg cccggtgcag
     9601 ggcgaccccc tggtggcgaa cctgggggtt gcccggcatg tcggtctgct cgcgatcgat
     9661 ttgcgcaccc gccgccgcat gcgcgtgaac ggccggctgg tggcggcaag cgaagaggcc
     9721 atcgtgctgg tggccgacca ggtctactcc aactgtccca agtacatcca gcggcgggtg
     9781 acggatgatc ctcgcgccgc gaacggcgag gccccaactg cggtgcgcgc cgcggcgctg
     9841 actccggagc aacgggaatg gatccggatg gccgacacct tcttcgtggg gaccaccaat
     9901 ccgggagagg gcgccgatgc gtcccatcgt ggcggggcac ccggcttcgt ggaggtgact
     9961 ggggagcgga tccggtggcc ggactatccc ggcaacatga tgttcaacac cctcggtaac
    10021 atcgagtcat cggggatggc cgggttgctc ttccccgact ttgccacggg gcgcgcgctg
    10081 ctggtgacgg gcaaggcgcg gatcgactgg ccggcccgct caggggcggc catcgaacgc
    10141 gccgtggagc tggatgtcga ggaggtagtg gagctggcgg gagtctttcc ggagcggctg
    10201 gcgttgctgg actactcgcc tcatctcccg aagccggcgg ggtaaggccg gctcaggtct
    10261 tgaccagggg ccgttcgttg tcgccgctcc gccgacgggt cggcatctgc gcagcggtga
    10321 gcggggcgaa gccgtaccgc tgccggatgg tgctgatgat ccaggtgctg ccgaggcggg
    10381 tcacctcggt ccataccttg ccggtgaggc gcttgaccag ccgatagcag accgcggggt
    10441 cgcggctggt ctcgagagcc acttcgcaca gcgtggttcc ctcctgttcc gcccgtgccg
    10501 tccatcccag caccatcgcc cagcctgaga catgctcgag tggcggcagc cccgcccgca
    10561 tcatggcgcg cgccatctgg tgccggttgt cgaaccccag ctgtcctgcc agttcgtccg
    10621 cggtcggcac gtccccgccg caggcggcga tcgcctgaac gatgcgctgg ccgtcggcgg
    10681 tgcgcgccgg gaacgcggcg ttgagcagtg tggtcaatct ggccattggt gtgctgcggt
    10741 ggagatatct gtatttaccg ccagatgacg tgcctagcaa gcggaagcac agaccggaac
    10801 gcgccagaag tcatagccgg aagactccgc caccacggac cgcgcaagaa gtcatataag
    10861 cgcaagaagt catagctcat cgcttcgaga agcgttagcg tgtgcccatt cgattcacat
    10921 tcaaccggct tggctaacca gcccgctgac agcgagttga cgttcaattg actcgcgcta
    10981 gctaggtttt gccgcctggg gaaccagttt ccatctaccg cgtactcgca ggaactccta
    11041 tgatcgcttc ctcgcggaat ctctggtatt gggcgtggct ggtgcagatg accgtcccga
    11101 agcgtgggcg cccaggctcg ggcgacgcgc atgtctggcg caacctggtg ctggtgcagg
    11161 cgcggagcgc cgacgaggcg ctggcaaagg ccgaagcaat cgggaagagc gccagcggag
    11221 atgcggaggg ggccctgctt ctggatggcc agccggccaa atccgtcttc gtgggcattg
    11281 ccgacgccgg gctggtcgat tttcggcttt ctgatggggt cgaggtgatg tttcagatgg
    11341 aaaggcagac cgcccggcac gcccgtggcc tcgcgcgagc caggccttcc ctgattgccc
    11401 ggctcaagca cgaggcggcg cagctcaggg catcggcggc gccggccggg cgctccctcc
    11461 gtctgcgagg taccggatct tcccgcccgg ctcgcgccgc cagagcgtga ggtacttgcc
    11521 ataagacggg gcgcctccct tcggcgtgat caccgattct cccacggtga agccgaggtc
    11581 ggaggcgccc ccgctcgcca cgggccgcca gctccacgcc gcatcatcgc catcgagcca
    11641 ctgccggatc cgctgaggtc cccggttgag ctcgcccgtg ccggagaacg tcaccgcatc
    11701 cgtcgccgca aaggctgcga aggcgtccgg cgcccccgac tttccggcca gcgcggcgaa
    11761 atcgagatcg gcccgggcaa aggcagcacc gggccccgag gccggcaccg gcgcgagcgg
    11821 cggcacggtg aatccctcgg gtgcgctgta gctggcaccc ggcaggagcc caacctcgac
    11881 gtgcgccacg aggagccacc gcccggcgtc gtagcgccac gccgagagat atttgccgaa
    11941 gcgaatcggc ggtccctcac cgccaccgct ggtggcaatg ccggtcacac cgtaggtcac
    12001 cccgaagctc ccgtcgcgcg acacctctcc atggagcggc acccagcgaa gcgtcaggct
    12061 cttgagtgcg gcctggccca gcaggagctg tctcacggcg tcgcgccccg ccaccaccgg
    12121 cgcgccggga tagaggaaca ccaggtccgg tgctcccact gcggcgaacc cctctcccgc
    12181 tccccgcgcc atgacgctgt cggccagggc ccgatcggcg gcaatcagct gatcctgccg
    12241 ggggggatcg cccggcttct gctgtgccag ggcggttacg aacggaagaa gtgttccgag
    12301 cagaacggct cggccggtgc gtcgaacact gtggatggac atgcctgtcc ctgactgaaa
    12361 ggaggagtcc cgggtttcag gaccgcacca tccggcgcag cccttcaccc agccgcgcca
    12421 cctcggcccg ggtgttgtac aggtacagcg aagcgcgcgc cgcacgggtc accccgaaac
    12481 gccgcagcag tggcagtgcg gccagatcac cgcttcgaat cgcgatgcct tcctggtcca
    12541 gttgtcccat cacctggtcc gggtccatcg ccccgagcgt gaagctgcag aggcagatcc
    12601 gctcccgcga atcgggtggc ccgacgatcg agagacgggg cacccgtccg agctcctcca
    12661 ccagcgcggc cgtcagctcg gcctcgtgct gctgcagggc ggggaagccg atgtcggtga
    12721 gaaaccggat ggcggctgcc atcccgatcg ccccggccac gttgggcgtc cccgccccga
    12781 atcggagtcc gcccggactc cattcggcgc tgtcgaaatc caccgcgtgc gccgcgttgc
    12841 tcccactctg gtaaggcggc agggcatcga gcagttcccg ccgtccccag aggactccga
    12901 tgcccatcgg acc
//
LOCUS       DATIFF010000302         1901 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1732373, whole genome shotgun sequence.
ACCESSION   DATIFF010000302 DATIFF010000000
VERSION     DATIFF010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1901
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1732373"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..926)
                     /locus_tag="VLD58_04350"
     CDS             complement(<1..926)
                     /locus_tag="VLD58_04350"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSB53558.1"
                     /translation="MLNQVADGVWVRQSEWVWSNAIVVRGEGGLILVDPGIDGSDLSQ
                     LADDLDRLGIPVVAGFSTHPHWDHLLWHPRFGDVPRYATHAGAHAASEARERAQRMAA
                     ESASGIPLELIGLLTPLPADGGPVPGEILEHQAHAIGHAAVLLADRGVLLAGDILSDV
                     LIPLLDPRRPDQVGAYETALDRLGKAASHIDVLVPATGPLPRVPRWRLAWPPIMPTST
                     RCGEERNRSTRVWLKTGSPAPTSRTWSRPGTRPDELRRHRAPGRHPLLARTAAGNEPS
                     VTRAPTFTAAPPAWRGEPPSGSRSGAHATVANR"
     gene            1134..>1901
                     /locus_tag="VLD58_04355"
     CDS             1134..>1901
                     /locus_tag="VLD58_04355"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSB53559.1"
                     /translation="MTALTTRTLLVATTATVAALAAGARAYRRDLTTAQDRLAAVRRH
                     HVSTPFGMVEYAESGVGDPVLVSHGIFHGCDGGLLSVRSSLPGRRIIAPSRFGYLGSD
                     LPAGATPMDQADAFAALLDHLDLARVDVVGISAGTTAALQFVLRHPDRTRHLVVMSGS
                     FPGDPMAVAPPAWAKFLYADLPLWAMKKVARPQFARLMGVPAGFPKTPEQAQEMDEML
                     ESIFPIGPRAAGAVFDAYISNPAVNQLPIEKITIPTII"
BASE COUNT          293 a          671 c          656 g          281 t
ORIGIN      
        1 cggttcgcga ccgtcgcgtg cgcgcctgag cgagaccctg atggcggttc accccgccaa
       61 gccggaggcg cggccgtgaa agttggcgca cgggtcacgg acggttcgtt ccctgccgct
      121 gtgcgggcca ggagcgggtg gcggccagga gcgcgatgtc gccgaagttc atccggacga
      181 gtgccgggcc tgctccaggt tcgactggtg ggggccggag agccagtctt gagccagacg
      241 cgcgtcgacc ggttcctctc ctcgccgcag cgcgtcgatg taggcatgat cggcggccag
      301 gcgagccgcc acctcgggac cctcggcaac ggtcccgtgg ccggcaccag gacatcgatg
      361 tggctggcgg ccttacccag ccggtcgagt gccgtctcgt aggcgcccac ctgatcgggg
      421 cggcgagggt cgaggagcgg gatcaggacg tcggagagga tgtcgccggc gagcaggacg
      481 ccacggtccg cgaggaggac cgcggcgtgg ccgatggcgt gcgcctgatg ctcgaggatc
      541 tcgcccggca cgggtccgcc atccgcgggc agcggggtga ggagaccgat cagctcgaga
      601 gggatgccgg atgcgctctc cgccgccatt ctctgcgccc gctctcgggc ttcactggca
      661 gcgtgggcgc cggcgtgggt ggcgtagcgc ggcacgtcgc cgaaccgggg atgccagagc
      721 aggtggtccc aatggggatg ggtggagaac ccggcgacca cgggaatgcc gagccggtcc
      781 aggtcatcgg cgagctggct cagatcggaa ccgtcgatgc cgggatcgac caggatcaac
      841 ccaccctccc cgcgcaccac gatggcattg ctccagaccc actcgctctg ccggacccag
      901 acgccgtcgg ccacctgatt cagcatcgtt tcactctgac aggtgtcacc acgcctgtcc
      961 tgtggaggca ttaggccgcc gcctcgcggc aagagacgca gtagtgagac cgggccaggg
     1021 cgcgaccagc ggccgactcg agcgggtgac tcagagctac ggtgctcctc gaaacgagtc
     1081 gtccgggacc ttggcctctc ggagtgcccc cggtcggcgg agacgatcag cagatgacag
     1141 ccctgacaac ccgcactctc ctcgtagcga cgaccgccac cgtcgccgcg ctggccgcag
     1201 gcgcccgcgc gtaccggcgg gacctcacga cagcccagga ccggctcgcg gcggtccggc
     1261 gccaccacgt cagcaccccg ttcgggatgg tggagtacgc cgagtccggc gtcggcgacc
     1321 ccgtcctggt cagccacggc atcttccacg gttgtgacgg cggcctgctc tccgtgcgct
     1381 cgagcctgcc cggacgccgg atcatcgcgc cgtcgcgctt cggctatctc gggtccgacc
     1441 tcccggccgg tgcgaccccg atggaccaag ccgatgcctt cgccgcgctg ctcgaccacc
     1501 tcgacctcgc ccgggtcgac gtcgtgggaa tctctgcagg caccaccgct gcgctgcagt
     1561 tcgtcctgcg ccatccggac cggaccagac acctcgtcgt gatgtcaggc agcttccccg
     1621 gcgatcccat ggcggtcgcc ccaccggcgt gggcgaagtt cctctacgca gacctgcccc
     1681 tgtgggcgat gaagaaggtg gcccggcccc agttcgcccg cctcatgggg gtcccggcgg
     1741 gattcccgaa gacgccagag caggcgcaag agatggacga gatgctcgag agcatctttc
     1801 cgatcggtcc gcgagccgcg ggcgcagtgt tcgacgccta catctccaac ccagcggtca
     1861 accagcttcc catcgagaag atcacgattc cgacgatcat c
//
LOCUS       DATIFF010000303         1554 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1118150, whole genome shotgun sequence.
ACCESSION   DATIFF010000303 DATIFF010000000
VERSION     DATIFF010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1554
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1118150"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(99..>1554)
                     /locus_tag="VLD58_04360"
     CDS             complement(99..>1554)
                     /locus_tag="VLD58_04360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004180 - carboxypeptidase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HSB53560.1"
                     /translation="GELGFQEIETSKYLVDLLRREGFRVETGYAGIPTAFVATWGSGK
                     PVIGLGTDIDGIPQASQKPGVACRAALIPGAPGHGEGHNSGMAVNITAALALKKIMER
                     DHLPGTIKIWPGVAEELVGTKAYYVRAGLFSDVDINFFSHVSSNFGVQWGSSDGNGLI
                     SLQYTFKGQSAHAAGAPWRGRSALDAVELMDIGWNFRREHLRLSQRSHYVIVNGGDQP
                     NVVPQNATVWYYLRELDYPHIKDMWAIADSIAAGAALMTGTTVDPVRVMGSAWPQHFS
                     KPIAEAMAANIRAVGMPKWSDADQEFAKALQKELKNPTSNGLDTTLRALTGPVPEEQK
                     RGGGSDDIGDVTWTVPTVTLRFPSNIPGLPGHNWTDAIAMATPVAHKGATAGAKAMAM
                     TMLDVLLTPKLVADAWDYFRNVQTKDVKYTPLIRPEDRPAIELNTNILARYRDQMRPY
                     YYDPKKYKSYLEQLGIKYPTVRGADGSCGSAGVP"
BASE COUNT          217 a          520 c          541 g          276 t
ORIGIN      
        1 cggcgaggag ggcgagcgaa agacaggcca cggacaaccg catggcgatt tcccggagtg
       61 ataggtgagc ccggcgtcgg accgcagcgg gagccatctc agggcactcc cgccgacccg
      121 cagctcccgt cggccccgcg cacggtcgga tacttgatgc cgagctgctc gaggtacgac
      181 ttgtacttct tcgggtcgta gtaatagggc cgcatctggt cccggtacct ggcgaggata
      241 ttggtgttga gctcgatcgc gggacggtcc tcgggccgga tcagcggggt gtacttcacg
      301 tccttggtct gcacgttgcg gaagtagtcc caggcgtcgg ccaccagctt gggggtgagc
      361 agcacgtcga gcatcgtcat cgccatcgcc ttggcgccgg cggtggcgcc cttgtgggcg
      421 accggggtgg ccatcgcgat cgcgtcggtc cagttgtggc ccggcagccc ggggatgttc
      481 gacgggaagc ggagcgtcac cgtcggcacc gtccaggtca cgtcgccgat gtcgtcggag
      541 ccgccgccgc gcttctgctc ctccgggacc ggtcccgtga gggcccgcag ggtggtatcg
      601 aggccgttgg aggtcggatt cttcagctcc ttctgcagcg ccttcgcgaa ttcctggtcg
      661 gcgtcgctcc atttcggcat ccccacggcg cggatgttcg ccgccatcgc ctcggcgatg
      721 ggcttgctga agtgctgcgg ccacgcgctc cccatcaccc gcaccggatc cacggtggtg
      781 ccggtcatca gcgcggcgcc cgcggcgatc gagtccgcga tggcccacat gtccttgatg
      841 tgcgggtagt ccagctcccg gagatagtac cagacggtgg cgttctgggg cacgacgttg
      901 ggctggtcgc ccccgttcac gatgacgtag tgggagcgct gcgacaggcg gaggtgctcg
      961 cggcggaagt tccacccgat gtccatgagc tcgacggcgt cgagcgcgct cctcccccgc
     1021 cagggcgccc ccgcggcgtg ggccgactgg cccttgaagg tgtactgcag cgagatgagg
     1081 ccgttcccgt cgctcgaccc ccactgtacg ccgaagttgc tgctcacatg gctgaagaag
     1141 ttgatgtcca cgtcgctgaa gagcccggcg cggacgtagt aggccttggt gcccaccagc
     1201 tcctccgcca ccccgggcca gatcttgatc gtaccgggaa ggtggtcccg ctccatgatc
     1261 ttcttgagcg cgagcgcggc ggtgatgttc accgccatcc cgctgttgtg gccctccccg
     1321 tgcccggggg cgccggggat cagcgccgcg cggcaggcga cgcccggctt ctgggaggcc
     1381 tgcggaatcc cgtcgatgtc ggtgccgagc ccgatgaccg gcttgcccga gccccaggtt
     1441 gccacgaagg ccgtcgggat gccggcatag ccggtctcga ccctgaatcc ctcgcggcgc
     1501 aggagatcga cgaggtactt cgaggtctcg atctcctgga agccgagctc cccg
//
LOCUS       DATIFF010000304         1208 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_195209, whole genome shotgun sequence.
ACCESSION   DATIFF010000304 DATIFF010000000
VERSION     DATIFF010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1208
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195209"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1208
                     /locus_tag="VLD58_04365"
     CDS             <1..>1208
                     /locus_tag="VLD58_04365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53561.1"
                     /translation="GPPERPPTLRVDARTQRDYFQIPDPSSPDGWRWFYVKGVNLGVA
                     LPGKFPTEFPLDSAVYAGWLDTIAAMHANTVRVYTILPPAFYRALAAWNRGHPDRILW
                     LIHGVWTELPPEHDFDDSAWKGEFREEMRRVVDLLHGHASFPARPGHAGGRYDADVSA
                     WTLAYIIGREWEPFAVKEFERRHPEHAPYSGRFLASRGPVGAMDAWMAEQCDYLLGYE
                     VDSYNSLRPIAYTNWPTLDPLHHVTEATGEEEQAWREKAGRPIPGGIHEYENDVVELD
                     AGLVEPTPANPAGWFASYHAYPYYPDFMLYDPGYDTARSSEGRSSYFGYLSDLKRHHA
                     GMPLLIAEYGVPSSRGLAHLQPQGWNHGGHDEREMASIDARLTREIRESGAAGGVLFA
                     WLDEWFKKNW"
BASE COUNT          200 a          435 c          399 g          174 t
ORIGIN      
        1 tcggaccgcc cgagcggccg cccaccctcc gggtggacgc gaggacacag cgcgactact
       61 tccagatacc cgacccctcg tcgcccgacg gctggcgctg gttctacgtg aaaggcgtga
      121 acctcggcgt cgccctcccc ggcaagttcc cgaccgagtt tccgcttgac tcggccgtct
      181 acgcgggctg gctcgatacc atcgcggcca tgcacgccaa taccgtccgg gtctacacta
      241 tcctcccgcc cgccttctac cgggcgctcg ccgcctggaa ccggggccat ccggaccgca
      301 tcctctggct catccacggc gtctggaccg agctgccgcc agagcacgac ttcgacgact
      361 ccgcctggaa gggggagttc cgagaggaga tgcgccgcgt ggtggacctg ctgcacggcc
      421 acgccagctt cccggcgcga cccggtcatg ccggcggccg ctacgacgcc gacgtgtcgg
      481 cctggaccct ggcgtacatc atcggccggg agtgggagcc gttcgcggtg aaggagttcg
      541 agcggcgcca cccggagcac gcgccgtaca gcggccgctt tctcgcaagc cggggaccgg
      601 tcggcgccat ggatgcgtgg atggcggaac agtgcgacta cctgctcggc tacgaggtgg
      661 acagctacaa cagcctccgg ccgatcgcct acaccaactg gccgactctc gatccgctgc
      721 accacgtcac cgaggccacc ggcgaggagg aacaggcctg gcgggagaag gcgggccgcc
      781 ccattccggg aggcatccac gagtacgaga acgacgtcgt cgagctggat gccggcctgg
      841 tcgagcccac gcccgcgaat ccggcgggct ggttcgcgag ctaccacgcc tatccgtact
      901 atccggactt catgctgtac gatccgggct acgacaccgc ccgctcgagc gagggccggt
      961 ccagctactt cggctacctg agcgacctca agcggcatca cgccggcatg ccgctgctca
     1021 tcgcggagta cggcgtcccg tcgagccgcg gactggccca cctgcagccc cagggctgga
     1081 accacggcgg ccacgacgag cgggagatgg catccataga tgcccggctc acgcgcgaga
     1141 ttcgggaaag cggcgcggcc ggcggagtgc tcttcgcctg gctggacgag tggttcaaga
     1201 agaactgg
//
LOCUS       DATIFF010000305         4012 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_964024, whole genome shotgun sequence.
ACCESSION   DATIFF010000305 DATIFF010000000
VERSION     DATIFF010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4012
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_964024"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..697)
                     /locus_tag="VLD58_04370"
     CDS             complement(<1..697)
                     /locus_tag="VLD58_04370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53562.1"
                     /translation="MIVLFRQFAFALVVAFLACRGRPPAEPQDAVARLVDSMRPAVER
                     AAGLRFRSKPRSAVRSRDQVRAYVIHKLDQELPADKAHGLQATYRLLGLLPDSLDLRT
                     LLLDLFAEQIVGFYDPDSTTLFVVANSDPQLLPLTISHELVHALQHQYLPLDSIMRQT
                     GDNDRLLAAQSVLEGQAVLVGMQVMVPDQNLYAMPEFWETYREQLRGMQSKMPVFSKA
                     PRILRESLIFPYLA"
     gene            complement(694..1467)
                     /locus_tag="VLD58_04375"
     CDS             complement(694..1467)
                     /locus_tag="VLD58_04375"
                     /inference="COORDINATES: protein motif:HMM:NF013632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HSB53563.1"
                     /translation="MTDETLVIIVAGVLGALIGSFLNVCILRWPKEESVIKPRSRCPG
                     CGRQIAAWDNIPILSWLILRGRCRHCKTGISIQYPLIELAVALLWAGMVWAYGLEIKA
                     LAGAVFFTILLGIALTDAREYIIPDEFSLGGLVIGVLFSIAGGFSGILTALLGAAVGF
                     GLLWGVGAAGTKMFKEDAMGGGDIKMMAMVGAFVGWQGVLLTVFLGALLGTLVFVPLS
                     LVGKKRLVPFGVFLSLGAAATWLAGAAVIAWYKNFVLVP"
     gene            complement(1457..2221)
                     /locus_tag="VLD58_04380"
     CDS             complement(1457..2221)
                     /locus_tag="VLD58_04380"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HSB53564.1"
                     /translation="MSLISTIRDLHRRKGRERRELTLAEGVRLLEEALAAGVVVKGAA
                     TSPMLEGTPRGIALKTRLEGAGVTLEEVDDDELTRLAGTEHPQGIVAVVEPRHWSFDD
                     IRIDPASVVLVLDGVQDPGNVGALARTALGLGAAGLVALSGTADLYNPKALRGSMGAL
                     FRLPSVTSTVDGFIGWARGAGLALWTTATSGSPLNRAKRDGPIALLVGNEGAGVRPEL
                     AAVASRSVAIPLGNGVESLNVAVAAGILLYEVTRDR"
     gene            2240..3040
                     /gene="thiD"
                     /locus_tag="VLD58_04385"
     CDS             2240..3040
                     /gene="thiD"
                     /locus_tag="VLD58_04385"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HSB53565.1"
                     /translation="MQIALTIAGSDSGGGAGIQADLKTFQQFGVYGTSVIVALTAQNT
                     RGVRAVHTVPDSMVEEQLAALASDLPPAALKTGMLATASLVHLVATAIQGYGWTNYVC
                     DPVMVASSGDRLLDPAAEFVVRDRLLPLATLVTPNLDEAEILAATEVRDLVQMEQAGR
                     RMLEQGATAALVKGGHLPGDLMTDVLVTREGVRRYTHARVQTTSTHGTGCTLSAAITA
                     GLALGRPLMEAVTDGLDFLHRAIAAAPGIGAGHGPVNHTVTARRPGLA"
     gene            complement(3045..3845)
                     /locus_tag="VLD58_04390"
     CDS             complement(3045..3845)
                     /locus_tag="VLD58_04390"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: protein motif:HMM:NF006054.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004731 - purine-nucleoside phosphorylase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HSB53566.1"
                     /translation="MTPAGAAVARWLGRWRPEVALVLGSGLGDLGDQLDGGRRLSYTG
                     IPGFAVPGVAGHRGQLIAGTLSGKNVLVQSGRFHGYEGHGPEVVAVPVRLFRELGIST
                     LVLTNAAGGIAAALGPGSLMLIADHLNFMFTNPLIGAVAPGELRFPDMSEPYDAGLRS
                     VARRVARASGIRLDEGVYAGVSGPSYETRAEIAMLRRLGADAVGMSTVPEVIAARAAG
                     LRCLAISTITNRAAGLGAGKLSHDEVVTEAKAAGERLGRLIRGLLAES"
BASE COUNT          693 a         1418 c         1334 g          567 t
ORIGIN      
        1 cggccagata ggggaagatc aggctttcgc ggaggatccg gggtgccttg ctgaagaccg
       61 gcatcttcga ctgcatgccg cggagttgtt cccggtaggt ctcccagaac tcgggcatgg
      121 catagaggtt ctggtccggc accatcacct gcatgccaac cagtacggcc tgcccctcga
      181 gaactgactg cgccgcgagc agccggtcgt tgtcaccggt ctggcgcatg atggaatcga
      241 gcgggagata ctggtgctgc agcgcgtgca ccagttcatg cgagatggtc agcggcagca
      301 gctgcgggtc ggagttggcc accacgaaga gggtggtcga atcgggatcg tagaacccga
      361 cgatctgctc ggcgaagaga tcgagcagca gggtgcggag gtccagggaa tcggggagca
      421 gtcccagcag gcggtaggta gcctggagac catgggcctt atcggcaggg agctcctggt
      481 cgagcttgtg gatgacgtag gcccggacct ggtcccggct ccgcaccgcg gagcggggct
      541 tcgaccggaa gcggagcccc gccgcccgct ccaccgccgg ccgcatgctg tcgaccagcc
      601 gggccacggc gtcctggggt tctgccggcg ggcgcccccg gcaggcgagg aaagccacca
      661 ccagcgcaaa ggcaaactgc cggaagagca cgatcacggc accaggacga agttcttgta
      721 ccaggcgatg acggcggcgc ccgcgagcca ggtcgcggct gcccctaggc tgagaaatac
      781 cccgaaaggc accagacgtt tcttccccac cagcgagaga ggcacgaata ccagggtgcc
      841 gaggagcgca cccaggaaca cggtgagcag gacgccctgc cagccgacga aggcaccgac
      901 catcgccatc atcttgatgt cgcccccgcc catcgcgtct tccttgaaca tcttggtgcc
      961 ggccgccccc acaccccaga ggaggccgaa gccgaccgcc gcacccagga gggccgtgag
     1021 gattccgctg aacccacccg cgatgctgaa cagcactccg atgacgagtc cgcccaggct
     1081 gaattcgtca gggatgatgt attcccgcgc gtcggtcagg gcgatgccga gcaggatcgt
     1141 gaagaagacg gcgccggcga gcgccttgat ctccagtccg taggcccaga ccatcccggc
     1201 ccagagcagc gcgaccgcca gctcgatgag cggatactgg atggagatgc cggtcttgca
     1261 gtggcggcag cggccccgga ggatgagcca cgaaagaatc gggatgttgt cccaggccgc
     1321 gatctgccgg ccgcagccgg gacagcggga ccgcggcttg atgaccgatt cctccttggg
     1381 ccagcgcaga atgcagacgt tgaggaagct cccgatcagc gcgccaagca cgccagccac
     1441 gatgatcacg agggtctcat cggtcacgcg tcacctcata gaggagaatg cccgcggcca
     1501 ctgcgacatt gagtgactcc accccgttgc cgaggggaat tgccaccgag cgggatgcga
     1561 cggcggccag ttccggccgc accccggcac cttcgttccc caccagcaat gcgatcggcc
     1621 cgtctcgctt cgcccggttg agcggactgc cgctggtcgc ggtagtccac agggccaacc
     1681 ccgcaccccg ggcccatccg atgaagccgt cgaccgtgct ggtcaccgac ggcagccgga
     1741 agagtgcccc catgctgccc cgaagcgcct tgggattata gaggtcggcg gtaccggaca
     1801 gggccaccag tcccgccgcg ccgagcccaa gcgcggtgcg cgccagcgcc ccgacgttgc
     1861 ccgggtcctg caccccatcc agtaccagca cgactgatgc cggatcgatg cggatatcgt
     1921 caaacgacca gtgccgcggc tcgaccaccg ccacgatgcc ctggggatgc tcggtgccgg
     1981 cgagacgggt gagctcgtcg tcatcgacct cctcgagcgt gaccccggcg ccctcgagcc
     2041 tcgtcttgag cgcgatgccg cggggtgtac cttccagcat cggagaggtt gcggcgccct
     2101 tgactaccac ccccgccgcg agcgcctcct ccaggagccg caccccttcc gccagcgtga
     2161 gttcccggcg ttcccggccc ttgcgccgat gcaggtcacg aatggtactg atcagggaca
     2221 ctggaaccgt gctctcctca tgcagatcgc gctgaccatc gcaggctccg attcgggggg
     2281 cggcgcgggc attcaggccg acctcaagac atttcagcag ttcggggtct acggcacgtc
     2341 ggtgatcgtg gcgctcaccg cccagaacac ccgcggagtg cgggcggttc acaccgtccc
     2401 cgacagcatg gtcgaagagc agctcgccgc gctggcctcc gaccttcccc ccgcagcact
     2461 caagaccggg atgctcgcga ccgcgagcct ggtgcacctg gtcgccacgg cgattcaggg
     2521 ctacggctgg accaactatg tctgcgatcc ggtgatggtc gccagctcgg gcgaccgcct
     2581 gctcgatccc gcggccgagt tcgtggtgcg cgaccggctg ctgccgctgg cgacactggt
     2641 gacgcccaac ctcgacgaag cggagattct cgccgcgacc gaagtccgtg acctggtgca
     2701 gatggagcag gccggccgcc ggatgctcga acagggagcg actgccgcgc tggtcaaggg
     2761 cgggcacctg cccggcgacc tgatgaccga cgtgctggtg acccgggaag gcgtgcgccg
     2821 ctatacccac gcccgggtgc agaccacctc cacccacggc accggctgta ccctctcggc
     2881 cgcgatcacc gcaggcctcg cacttggccg cccgctgatg gaggccgtga ccgatggtct
     2941 cgacttcctg caccgcgcca tcgcggccgc acccggcatc ggggcgggtc atggtccggt
     3001 gaatcatacg gtgaccgcgc gccggccggg attggcctga ggcctcagct ctccgccagc
     3061 aggccccgaa tcagccgccc cagccgttct cccgccgcct tcgcttcggt caccacttca
     3121 tcatgtgaca gcttccccgc gcccaggccc gcggcccggt tggtgatggt cgaaatcgcg
     3181 aggcagcgaa ggccagcggc gcgcgcggca atgacctccg gcaccgtcga catccccacc
     3241 gcatcggctc ccagccgccg cagcatggca atctcggccc gggtctcgta gctcggaccg
     3301 cttaccccgg cgtacactcc ctcatcgagg cggatgccgc tggcgcgcgc gacccgccgg
     3361 gccacggagc ggagcccggc gtcgtacggc tcggacatgt cggggaagcg cagctcacca
     3421 ggcgccaccg cgccgatcag cggattggtg aacatgaagt tgaggtgatc ggcgatcagc
     3481 atgagcgacc cgggaccgag cgccgcggcg atgccgccgg cggcgttggt cagcaccagg
     3541 gtcgagatgc cgagttcccg gaagagccgc accggcacgg cgacgacttc gggaccgtgt
     3601 ccctcatacc catgaaatcg gccgctctgc accagcacat tcttgccgct cagggtcccg
     3661 gcgatcagct gtccgcgatg gcccgccacc cccggtaccg caaagccggg aatcccggtg
     3721 taggagaggc gccgaccgcc gtccagctga tcgccgagat caccgaggcc ggaaccgagc
     3781 accagcgcca cctcggggcg ccaccggccc agccagcgag cgaccgccgc gcccgcagga
     3841 gtcatcctcc ggcccggcgg ctcgaccggg ccactcgaag gatggcgccg gcgatgagcg
     3901 gatcatcgag ctgaagcggc agggcccgcg cgtcggtgat gttggcctga ccggcctcgc
     3961 agtcagggag gagttcgggt gcgccggccc gaatggcgtc acgcaccgag gc
//
LOCUS       DATIFF010000306         3150 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1272036, whole genome shotgun sequence.
ACCESSION   DATIFF010000306 DATIFF010000000
VERSION     DATIFF010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3150
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1272036"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            149..448
                     /locus_tag="VLD58_04395"
     CDS             149..448
                     /locus_tag="VLD58_04395"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HSB53567.1"
                     /translation="MALLVLRTLDVLGRAHGYAVSEHIQRVSRDQLRVEEGSLYPALH
                     RMEQDGWIRAEWGLTEKNRQARFYTLTTAGRRQLQVEQDTWGRLTDGVGRVLRYA"
     gene            462..3140
                     /locus_tag="VLD58_04400"
     CDS             462..3140
                     /locus_tag="VLD58_04400"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB53568.1"
                     /translation="MGWVNRLLNVLRPGRLSSDLDRELAFHLQETTDRLIEGGLSPEA
                     AAREAARRLGHRPTVKERTRDMDVVVWLESLFADLRYAFRSLRNAPGFTLVAVLSLAL
                     GIGANTAIFSLIDTLILKSLPVAEPEQLVKLAMGEDRNDVFTNPLWEAIRDQDHSFNG
                     VFAFGSDQFDLASSGEAHMVDGNLVSGGYFSTLAIQPALGRLLQPADDQRGCAGLAVI
                     SYGFWQGQFGGRADIVGSQLSLNRSPFTIVGIVPQGFSGVEVGRSPQVYVPLCTEPLL
                     HGGEGMLDERSAWWLQLLGRLPEGTSLAQAGSRLAAASSAIFAATLPSNWGADGQRDY
                     LKRTLTVFPAASGVSDIRQQYRIALLVLMGVVGVVLLIACANVANLLLARAASRRREL
                     AMRLAIGASRSRLIRQALTESILLSILGAALGLVFARWSSHLLAGMIGGGPVSVTLNL
                     SLDLRLLAFSTALACFTGILFGVAPAWRSVRLDVHDVLKSGGGTLTPTGRSLVAGKTL
                     VVGQVALSLMLVALAGLLVGSFRALATADPGFDRSGVVLARLNWGSLGLTQPARQVAA
                     REILDRIRAEPGIQAAGASVITPVSGRGWNSFVLIQGYQPSDKYDNLVWFNGVTDGYF
                     TSLATPVLAGRDIAPSDQAGSPQVAVVNRAFARKFFGERNPVGQQFEVRNADTPKPPV
                     EIVGVVGDAKYRSLRDTPEPTVYLPWTQTERFDQLTFQARGSQGVAPTVGAILKATQA
                     VVPTATLDIRTLAGQLDQSLARERLLAMLSGFFGGLALLLALIGLYGTMAYSVTRRKK
                     EIGIRVALGATRTRLVRMVTSEAGRMIAAGLVLGGLGIVGATRLVTSFLYERTPLDPP
                     TIGIAVALVTGVALAAGALPAIRAVRQDPQSVLREE"
BASE COUNT          453 a         1103 c         1065 g          529 t
ORIGIN      
        1 tgccgtgctc ggaatggggg aactggccga atctaaccga tctgaaaccc ccggcttgcc
       61 ggccccgtca ggccgactta catagctagc tatgtgaaca ccaaggtccg atacggcccg
      121 acagaagaac gacatcctcc agggaaccct ggccttgctg gtgctccgga ccctcgacgt
      181 cctggggcgc gcccacggct atgcggtctc cgagcacatc cagcgggtgt cccgggacca
      241 gctccgggtc gaggaaggct cgctctaccc cgctctgcac cggatggagc aggacggctg
      301 gatccgggcc gagtggggac tcaccgaaaa gaaccgtcag gcccgtttct acacgctcac
      361 cactgccggc cgccgccagc tccaggtcga gcaggacacc tggggccggc tcaccgacgg
      421 ggtcggccgg gtcctccgtt acgcctgaca aggagcgcca catggggtgg gtcaatcgac
      481 tgctcaacgt tctccggccc ggccgcctct cgagcgacct cgatcgggag ctggcgttcc
      541 acctgcagga aacgactgac cgcctgatcg agggcggcct ctccccagag gcggccgccc
      601 gggaggcggc gcgccggctg ggccaccggc ccacggtcaa ggaacggacc cgcgacatgg
      661 acgtggtggt ctggctcgag tcgctgttcg ccgatctgcg ctacgccttc cgctcgctca
      721 ggaacgcccc cggcttcacc ctggttgcgg tgctgtccct cgccctcggc atcggcgcca
      781 acaccgcgat cttcagcctg atcgataccc tcatcctcaa gtctttgccg gtggcagagc
      841 cggagcagct ggtcaagctc gcgatgggcg aggaccgcaa cgacgtgttc accaatcccc
      901 tctgggaagc gatccgggat caggatcaca gcttcaacgg cgtcttcgcc ttcggctccg
      961 accagttcga tctggcaagc tcgggcgagg cgcacatggt cgacggcaac ctggtgagtg
     1021 gcggctattt ctcgaccctg gccattcaac cggcactggg acgcctgttg cagccggccg
     1081 acgaccagcg cggctgcgcc ggcctcgccg tgatcagcta cggcttctgg caggggcagt
     1141 tcgggggccg cgccgatatc gttggcagtc agctttcgct caatcgatcg ccgttcacca
     1201 tcgtgggtat cgtgccccag ggattcagcg gggtggaggt gggccgctcg ccccaggtct
     1261 acgtgccgct ctgcaccgag ccgctgctgc acggtggcga ggggatgctg gatgaacgga
     1321 gcgcgtggtg gctccagctg ctggggcggc tccccgaggg aacctcgctg gcgcaggcgg
     1381 ggtcacgcct cgccgccgcc tcctccgcca ttttcgcggc cacccttccc tccaattggg
     1441 gtgccgacgg ccagcgcgac tacctcaagc gcaccctcac cgtattcccg gcagccagcg
     1501 gcgtctccga catccggcag cagtatcgca tcgccctgct ggtgctgatg ggcgtggtgg
     1561 gcgtggtgct gctgatagcc tgcgccaacg tcgcgaacct gctccttgcc cgggccgcgt
     1621 cacggcgtcg ggagctcgca atgcggctcg cgatcggcgc cagccgatcc cggctgatcc
     1681 gccaggccct caccgagagc atcctgctct ccatcctcgg ggcggcactc ggcctggtct
     1741 tcgcccgctg gagcagccac ctgctggcgg ggatgatcgg tggcggaccg gtctcggtca
     1801 cgctcaacct ctcgctggac ctgcgcctgc tggccttcag caccgcgctt gcgtgtttca
     1861 ccggcatcct cttcggtgtg gcccccgcct ggcgatcggt tcgcctggac gtgcacgacg
     1921 tgctcaagag cggtggtggg actctgacac cgaccggtcg ttcgctggtg gcggggaaga
     1981 ccctggtagt agggcaggtg gcgctgtcgc tgatgctggt ggcgctggcc ggtttgctgg
     2041 tcggaagctt ccgggccctt gcaaccgccg atccggggtt cgaccggagc ggcgtcgtgc
     2101 tcgcccgcct caactggggc agtctcggtc tcacccagcc cgcccggcag gtcgccgccc
     2161 gggagatact cgaccggatc cgggccgagc ccggcattca ggctgccggc gcgtcggtga
     2221 tcaccccggt gagcgggcgg gggtggaaca gcttcgtgct gatccaggga taccagccga
     2281 gcgacaagta cgacaacctg gtctggttca acggggtgac cgacgggtac ttcacatcgc
     2341 ttgcgacgcc ggtcctcgcc ggacgggaca tcgcgccctc cgatcaggcc ggctcgccgc
     2401 aggtcgcggt ggtgaaccgg gccttcgccc ggaagttctt cggcgagagg aatccggtcg
     2461 gccagcagtt cgaggttcgc aacgccgaca ccccgaagcc gccggtcgag atcgtcggcg
     2521 tggtgggcga cgccaagtac cgttccctcc gcgacacgcc ggagcccacc gtctatctcc
     2581 cctggaccca gacggagcgc ttcgatcagc tcaccttcca ggcgcggggc tcgcagggcg
     2641 tggcgccaac ggttggcgcc atcctcaagg cgacgcaggc ggtcgtcccc acggcgaccc
     2701 tcgacatccg caccctcgcc ggccagctcg atcagtcgct cgcgcgtgag cgcctgctgg
     2761 ccatgctctc ggggttcttc ggcgggctgg cactgctgct cgccctcatc ggcctctacg
     2821 ggacgatggc ctacagcgtc acccgccgga agaaggagat cgggatccgg gtggcgctcg
     2881 gtgcaacccg gacgcggctg gtgcgcatgg taaccagcga ggccggacgc atgatcgcgg
     2941 ccggcctcgt tctgggtgga ctcggaattg tcggcgcaac ccggctggtg acgtccttcc
     3001 tctacgagcg gaccccgctc gaccctccga cgatcggcat cgcggttgcc ctggtcaccg
     3061 gggtggcgtt ggcggcgggt gcgctccccg ccatccgggc ggtgcgccag gatccgcagt
     3121 cggtgctgag agaggagtag tcgagggcgc
//
LOCUS       DATIFF010000307         5339 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2194640, whole genome shotgun sequence.
ACCESSION   DATIFF010000307 DATIFF010000000
VERSION     DATIFF010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5339
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2194640"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            391..1449
                     /locus_tag="VLD58_04405"
     CDS             391..1449
                     /locus_tag="VLD58_04405"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSB53569.1"
                     /translation="MTLSPREQARIGVTFAPVVRAPLDRSVRTVAQVTYDETRVKAVA
                     PLIEGWVDRLFVDFTGQAVRQGDALFSIYSPMVVSAQQELLLGHQLVKDLSAGTPDAT
                     RNAQDLLESSRRRLEYWGVPQDEIQQIEASGTLRRTVTLRSPYRGVVVEKLVLAGQRI
                     MPGDVAYRIADLSRVWLEGEVFERDLAAVRLGLPVSAEFTALPGAVRQGRVAYVYPTV
                     NPETRTVRIRVELANPDLALKPGMYATIRFTAPADSVLSVPRSAVLATGERNFVFVRS
                     ADGQFVPHVVTLGAATDERVAILAGLRIGDTVVTSGTFLVDAESNLGSLMGGMGNMPG
                     MDVTAPTRDTASSPAHKE"
     gene            1453..4791
                     /locus_tag="VLD58_04410"
     CDS             1453..4791
                     /locus_tag="VLD58_04410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018251208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CusA/CzcA family heavy metal efflux RND
                     transporter"
                     /protein_id="HSB53570.1"
                     /translation="MLQRLIAWSVGNRLLIWLFTAAAVALGVLAVRRTPLEALPDLSD
                     VQVIVQADFNEQAPRIVEDQVTYPIAAEMLKVPGARTVRGYSFFGVSFVYVIFEDGTD
                     LYWARTRVLEYLSGIKGKLPPSVTPALGPDATGLGWVFQYALEDTTGQRSLAELRSVQ
                     DWYLRYALTAVPGVSEVASLGGFEKQYQIDIDPAKLQGYGISMSRVIGSIQNANADVG
                     AMVMELSEREYMVRGLGYLKSVSDIENVVVAATAAGTPIRVAELGRVGVGPAVRRGIA
                     DLDGRGDAVGGIVVMRFGENALTTIQRVKAKLEQVQAGLPAGVVIRPVYDRSDLIERA
                     IETVRRTLLEESVIVALVCIAFLLHARSALVAILTLPVGILMAFIAMRWVGVSADIMS
                     LGGIAIAIGAMIDAAIVMIENMHKRLERAVDAKDRAAGRSPAPRSLDTGTLTTAERWR
                     VVVESAQEVGPALFFSLLIITVSFVPVFALEGQEGRLFKPLAYTKTFAMAAASLLSLT
                     LVPVSMGLFIRGRVLRERANPINRALSRAYRPALAYVLRHRWGVIGAALVVLVLTWIP
                     LRRIGSEFMPPLNEGTILYMPTTLPGVSVARAREILRIQDSILMTFPEVEHAWGKAGR
                     ATTATDPAGLDMFETTITLKPEAEWRPGISYESLVSTMDSAVRLPGVTNAWTMPIKGR
                     IDMLATGIRTPVGIKIFGPDLGELERLGKEIEQAVQTVPGTRSAFAERAVSGYYLDIE
                     IDRAAAARHGLNVGDIQAVIATAVGGMTITQTVEGRERYGVRVRYPQELRDTPERLAS
                     VLVAVAHGTEAGAGSTGSMAGMGSVGGPGPAGGSAASGGGYVPLGQVATIRQVAGPMV
                     VRTEDAIPTAWVYVDVTGRDIGGYVADAQRVVADRITLPPGYSLVWSGQYEYMQRAAA
                     KLQLVIPITLAIIFLLLYLNFKSVGETLIVMLSVPFALVGGIWFIWLLGYNWSVAVAI
                     GFIALAGVATETGVVMLIYLDHAWAARRAAGRPSLRDLYEGVMEGGAERVRPLMMTVT
                     AIIAGLLPILWGGGAGASVMKRIAAPMVGGMLSSTILTLLVIPTIYSLWKQKAVTVEA
                     ESGAETGQPVPRRRWGPTSEAALT"
     gene            4914..>5339
                     /locus_tag="VLD58_04415"
     CDS             4914..>5339
                     /locus_tag="VLD58_04415"
                     /inference="COORDINATES: protein motif:HMM:NF024603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HSB53571.1"
                     /translation="MRMFAVTLALAGTALALAACGSDSATGPGGDTVLESVSPAAGAT
                     GVDPSSPIMVRFGGPMAAGMEQYVDLHQGGTGGAIVPMSCSFSADRTTLTCNHGQPLQ
                     SGATFTIHVGSGMMDANGHQAEVEQHAMGMGGQVVTGQMM"
BASE COUNT          807 a         1749 c         1901 g          882 t
ORIGIN      
        1 cgtggacttc atgacactgc tggacgacca gatgacggtg aaccgctatc ggcaggacct
       61 gttcaccctg gaggcgcagc gaggccaggc cctcgcggag ctggagatgc tcctgagccg
      121 tcccctgttc aaccccgacg acgcgactct cgcctccgga ggaacccggt gaaaaaccca
      181 gcgatagcgg cccagccatc ggagtcgtcg gcggagccct tcggtcgacc gtcctcgccg
      241 gcgggccggc gcatgcgggc ggccgcactc gccttggcgc tcgcggcggc agccggggtc
      301 gcgatctggg ctacccgcga ttcgaccagt gcgaaggcgg cccgggggca tgcacacggc
      361 gctccaactg gaaccgggga ggccatgccg gtgacgctca gcccccggga gcaggcgcgg
      421 atcggcgtca ccttcgcgcc tgtagtgcgc gccccgctgg atcgctcggt gcgaactgtc
      481 gcgcaggtga cgtatgacga aacccgagtc aaggccgttg cccccctcat cgagggatgg
      541 gtggaccggc tcttcgtgga cttcaccggc caagccgtgc ggcagggcga tgcgctgttc
      601 agcatttact cccccatggt cgtcagcgcc cagcaggagc tcctcctggg ccaccagctg
      661 gtcaaggatc tgtccgccgg caccccggac gcgacccgga acgctcagga tctcctggag
      721 tcctcccgac ggcggctgga gtactggggc gtaccgcagg acgagatcca gcagatcgag
      781 gcgagcggca cgctgcggcg gacggtgacg ctccggtcgc cctaccgcgg tgtggtggtg
      841 gagaagctag tgctcgcggg ccagcggatc atgccggggg acgtagcgta ccggatcgcc
      901 gacctgagcc gggtctggct cgagggcgag gtgttcgagc gcgacctcgc cgccgtccgt
      961 ctcggtcttc cggtgagtgc cgagttcacc gccctcccgg gcgcggtccg gcaagggagg
     1021 gtggcatacg tctatccaac ggtgaatccc gagacccgga ccgtacggat ccgggtggag
     1081 ctggcgaacc ccgacctcgc actcaagccc gggatgtatg ccactatccg cttcacggcc
     1141 ccggccgaca gcgtgctcag cgtgccccgc tccgccgtgc tcgccaccgg cgagcgcaac
     1201 ttcgtattcg tgcggagcgc cgacgggcag ttcgtgcccc acgtggtgac gctcggtgcc
     1261 gccaccgatg agcgggtggc gatcctggcc gggttgagga tcggcgatac ggtcgtgacc
     1321 tcggggacct tcctggtgga tgccgagtcg aacctgggct ccctcatggg cgggatgggc
     1381 aacatgcccg gcatggatgt gacggcgccg accagggata ccgcttcctc ccccgcgcac
     1441 aaggagtaga ccgtgctcca gcgcctgatc gcctggtcgg tcggcaaccg gttgctgatc
     1501 tggctcttca ccgccgcggc cgtggcgctg ggggtgctgg cggtacgccg gacaccgctg
     1561 gaggcgctgc ccgacctgag cgatgtgcag gtgatcgtcc aggccgactt caacgagcag
     1621 gccccccgga tcgtggaaga tcaggtcacc tatcccatcg ccgccgagat gctcaaggtc
     1681 ccgggggcgc ggacggtgcg gggctactcg ttcttcgggg tctcgttcgt gtacgtcatc
     1741 ttcgaggacg gcaccgacct gtactgggcg cgcacccggg ttctggagta cctgagtggg
     1801 atcaagggga agcttccccc cagcgtcacc cccgcgctcg gtccggacgc caccgggctt
     1861 gggtgggttt tccagtacgc gctcgaggac acgactggac agcggagcct ggcggagctc
     1921 cggagcgtgc aggactggta tctcaggtac gccctgaccg ccgtgcccgg tgtctccgag
     1981 gtggcttccc tcggcgggtt cgagaagcag tatcagatcg acatcgatcc cgccaagctg
     2041 cagggctacg ggatttcgat gagccgggtc atcgggtcga ttcagaacgc gaatgccgat
     2101 gtcggcgcga tggtgatgga gctctccgag cgagagtaca tggtgcgcgg cctcgggtac
     2161 ctcaagtcgg tctccgacat cgagaacgtg gtggtcgcag ctaccgccgc cggaaccccg
     2221 atccgcgtgg ccgagctggg gcgagtgggc gtgggacccg ccgtgcggcg tggcatcgcg
     2281 gatctggacg ggcggggaga cgccgtcggg ggcatcgtgg tgatgcgctt cggcgagaac
     2341 gccctgacca cgatccagcg ggtcaaggcg aagctcgagc aggtgcaggc cggactgccg
     2401 gcgggcgtcg tgattcggcc ggtgtacgat cggagcgatc tcatcgagcg ggcgatcgag
     2461 accgtgcgga ggacgctcct cgaggagagc gtgatcgtcg ccctcgtctg catcgcgttc
     2521 ctgctccacg cccgctccgc gctggtggcg attctcacgc tgccagtcgg gatcctgatg
     2581 gcgttcatcg cgatgcggtg ggtcggcgtg agtgccgata tcatgtcgct cggcggcatc
     2641 gcgatcgcga tcggtgcgat gatcgatgcc gcgatcgtga tgatcgagaa catgcacaag
     2701 cggctggagc gggcggtcga cgccaaggac cgggccgcgg gccgaagccc cgcaccccgc
     2761 tccctggaca ccggtacgct cacgacggcc gagcgctggc gggtggtggt ggagtcggcc
     2821 caggaggtcg gcccggcgct cttcttctcg ctgctaatca tcaccgtctc gttcgtgccg
     2881 gtcttcgccc tggaggggca agagggccgg ctgttcaagc ccctcgccta caccaagacc
     2941 ttcgcgatgg ccgcggcgag cctcctctcg ctgacgctgg tgcccgtcag catggggttg
     3001 ttcattaggg gccgagtgct ccgggagcgc gccaacccga tcaatcgggc gctcagccgc
     3061 gcctaccggc ccgcgctcgc ctacgtactc cggcaccgct ggggcgtcat cggcgctgca
     3121 ctcgtcgtcc tggtgctgac ctggattccg ttgcggcgca tcgggagcga attcatgccc
     3181 ccgttgaacg agggcacgat cctctacatg cccacgaccc tgccgggggt gagcgtagcc
     3241 cgggcccggg agattctgcg catccaggac agcatcctca tgaccttccc cgaagtcgag
     3301 cacgcctggg gcaaggcggg ccgggcgacg accgcgaccg acccggccgg tctcgacatg
     3361 ttcgagacca cgatcaccct gaagcccgag gcggagtggc gcccggggat cagctacgag
     3421 tccctggtct cgaccatgga ttcggccgtg cgcctcccgg gcgtcaccaa cgcctggacc
     3481 atgccgatca agggccggat cgacatgctc gccaccggca tccggacgcc ggtggggatc
     3541 aagatcttcg gtcccgacct cggagagctc gagcggctgg gcaaggagat cgagcaggcg
     3601 gtccagaccg tgccgggcac ccggagcgcg ttcgccgagc gcgcggtgtc cggctactat
     3661 ctcgacatcg agatcgaccg tgccgcggcg gcccggcacg gcctcaatgt cggtgacatt
     3721 caggcagtga tcgccacggc cgtgggaggc atgacgatca cccagacggt cgagggccgg
     3781 gagcgctacg gcgtgcgggt ccgctacccg caggagctgc gggacacccc cgagcggctc
     3841 gcctcggtgc tggtggccgt cgcccatggg acggaggcgg gcgccgggag cacagggtcg
     3901 atggccggga tggggtcggt tggtgggcct ggtcccgcgg gagggtccgc cgcctccggc
     3961 ggcggctacg tgcccctcgg acaggtcgcc accatccggc aggtcgccgg ccccatggtg
     4021 gtccggaccg aagacgccat cccgacggcg tgggtgtacg tcgatgtcac cggccgcgac
     4081 atcggtggct acgtggccga cgcccagcgg gtcgtcgccg accgtatcac cctgccgccc
     4141 ggttactcgc tcgtttggag cggtcagtac gagtacatgc agcgtgcagc cgccaagctt
     4201 cagctggtca tcccgatcac gctcgcgatc atcttcctgc tgctctacct gaacttcaag
     4261 agcgtgggtg agacgctcat cgtgatgctc tcggttcctt tcgcattggt cggggggatc
     4321 tggttcatct ggcttctggg ctacaactgg tcggtggcgg tcgccatcgg cttcatcgcg
     4381 ctcgccggcg tggcgaccga gaccggggtc gtgatgctga tctacctgga ccatgcctgg
     4441 gcagcccggc gggcggccgg acggccgtcg ctgcgggacc tctacgaggg ggtcatggag
     4501 ggtggcgcgg aacgggtgcg gcccctgatg atgaccgtga cggcgatcat cgccggtttg
     4561 ctcccgatcc tgtggggggg cggggccggc gccagcgtca tgaagcggat cgcggcgccg
     4621 atggtcgggg gcatgctgag cagcaccatt ctcaccctgc tggtgattcc gaccatctac
     4681 tctctctgga agcagaaggc ggtgaccgtc gaggctgagt ccggggccga gacaggccag
     4741 ccggttccgc ggcggcggtg gggcccgacg tcggaggcgg cgctcacctg acgagtgggc
     4801 cgatcgcttc gaccagcagg catctgcaac taaacctttc ttaacctccg ggtcaggggc
     4861 ggttcacgca tcgggccgta tcttggcacc agtctacaac ttcggagtga gagatgcgga
     4921 tgttcgcggt gactctggcc ctggctggaa ctgcgttggc gctggctgca tgcggcagcg
     4981 acagtgcgac cggaccgggc ggggatacag tcctcgagtc ggtcagccct gccgccggtg
     5041 cgaccggtgt cgatccctcc tctccgatca tggtgcgctt cggcgggccg atggcggcgg
     5101 gcatggaaca gtacgtagac ctccaccagg gcggcactgg aggggcaatt gtccccatga
     5161 gttgcagctt ctcggccgac cggaccacac tgacctgtaa ccacgggcag ccgctccagt
     5221 cgggagccac attcacgatc catgtgggct ccggtatgat ggacgcgaac ggtcatcagg
     5281 cggaagtcga acagcacgcg atgggcatgg gcgggcaggt ggtcaccggc cagatgatg
//
LOCUS       DATIFF010000308         4215 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_964141, whole genome shotgun sequence.
ACCESSION   DATIFF010000308 DATIFF010000000
VERSION     DATIFF010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4215
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_964141"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..351)
                     /locus_tag="VLD58_04420"
     CDS             complement(<1..351)
                     /locus_tag="VLD58_04420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53572.1"
                     /translation="MSERQGGRAARRPVVRRGGTIAFGLLLFLAALPLCRLTAQQDLD
                     ESRRRLEEVRRERARLEQERTRLQGQVHDLGAEVENLERQRQTTNRIVNELDAQIGGL
                     NGHVDQSSTDLVLTQ"
     gene            complement(344..1213)
                     /locus_tag="VLD58_04425"
     CDS             complement(344..1213)
                     /locus_tag="VLD58_04425"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HSB53573.1"
                     /translation="MRLLFREALLAFRRAPLLSALSITTIGFSLYAVGLFALVAVNLR
                     EALRIVEQRVEVVAYLLRGTPAETIAQASQDIAAFPEVQRVTFVSEEEALKRARAELV
                     EFRDAYRDLSVNPLPASLEIQLKEGFRDAEHTSAVADRLRGYGFIDDIRYGREWIEKL
                     DRLRNIAGVVGLTIGLAFAAVAVVIIGVTIRITVLQRAREITIMRLVGATNGFIRGPF
                     LLEGAIKGLLGGLVAILLSYGTYILFRGQIELATSGIVFLKQGQVLMGMIFGVAIGLG
                     GSLVSVGRHLKNV"
     gene            complement(1210..1902)
                     /gene="ftsE"
                     /locus_tag="VLD58_04430"
     CDS             complement(1210..1902)
                     /gene="ftsE"
                     /locus_tag="VLD58_04430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HSB53574.1"
                     /translation="MIRFHHVTKDYPKGVALKDVSLHIAKGEFVFLTGHSGAGKSTML
                     KLMYGALRPTHGDVRVSGFNIGSITQAEIPRLRRRLGVVFQDFRLLEDRTAEENIAFA
                     LEVTGARADAIPARVMRALTQVGLAAKAHAYPQELSGGEQQRVAIARALINDPTILLA
                     DEPTGNLDERATRGVFQLIREINATGTCVVMATHDLDLVKQTTYRNVEMRDGAIVFDS
                     GQDEQTAEPELA"
     gene            complement(2015..3163)
                     /locus_tag="VLD58_04435"
     CDS             complement(2015..3163)
                     /locus_tag="VLD58_04435"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aspartate aminotransferase family
                     protein"
                     /protein_id="HSB53575.1"
                     /translation="MKRKIGLSTLAIHGVPSRQGDWTPVVAPIFQSSTFTNPVGSGEE
                     VMYSRYGNNPNQVALAAKYALLEGAEAAIFVASGMGATALAHLAVLRPGDHLITSSWI
                     YGGTRRLFDEEFGRLGIEVTYVQPDHPRMWRRSVRKSTRAIFVETPTNPTMRVVDLTP
                     MAQIARDGGLALLVDASFASPINFRPLEHGADIVISSATKYLNGHSDVIAGAVAGSSS
                     IIEEVTRLMTLWGQAIDPHAAWLVERGLRTLDVRMQRHNVNGMAVARWGETRDAIVRV
                     HYPGLPSHPDHAYAASVLDGFGGMVGLELKGGARAAEKFLKKLKLVRHAPSLAGVESL
                     ISEPRLTSHRKLTEDQRAKQGIPDGFVRLSCGLENSEDIIADLEQALG"
     gene            complement(3174..3725)
                     /locus_tag="VLD58_04440"
     CDS             complement(3174..3725)
                     /locus_tag="VLD58_04440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53576.1"
                     /translation="MTQTIRVEQLLRETVQSPYCDLVTRPTGRAVRSSIQQRLTAIHT
                     TLTLLDFSEVGLVDFSCADEVIAKLLLEPVSETAIVLQGLREEQLEAIEHVLEHHDLA
                     ALVRDPVLGVARIVGRVSPDLRTAFFTLQQHGPATPDELAGHTGWPVERAEGVLNALN
                     RLRLVIRGEAGFMVPLGSEPLSP"
     gene            complement(3722..>4215)
                     /locus_tag="VLD58_04445"
     CDS             complement(3722..>4215)
                     /locus_tag="VLD58_04445"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB53577.1"
                     /translation="THELGIDAKATMGFAMALSEACQNIVEHAGTGGWVAVHAYTFRK
                     RLGRRVVVIAVSDGGVGFRRSLEATQSRRFGDRWGDGAALEAAVIQNVSRFRDPGRGQ
                     GIAGIKRYLGRWSGKLSIRSGTARIAIVPDWDDEPPMTEHLAPFPGAQLQIVIPAQEP
                     AAG"
BASE COUNT          675 a         1360 c         1493 g          687 t
ORIGIN      
        1 ctgggtcagg accaggtcag tgctcgattg atcgacgtgg ccgttgagcc cgccgatctg
       61 ggcatcgagt tcgttgacga tgcggttggt ggtctggcgc tggcgttcga ggttctccac
      121 ttcggcgccg aggtcgtgga cctggccctg cagccgggtg cgttcctgtt ccagccgggc
      181 ccgttcgcgg cggacttcct cgaggcggcg gcgggattcg tcgaggtcct gctgggcggt
      241 caggcggcaa agcggcaagg cggcaaggaa gagcaacagg ccgaaggcga tggttccgcc
      301 tctccgaacc actggccgcc tggccgccct gccgccttgc cgctcagaca ttcttcaaat
      361 gcctccccac gctgaccagg ctaccgccca gcccgatcgc tacaccaaag atcatgccca
      421 tcaggacctg gccttgcttg aggaagacga tgccgctggt ggcgagctcg atctgccccc
      481 ggaagaggat gtaagtcccg tagctcagca ggatcgccac caggccgccg aggagaccct
      541 tgatcgcgcc ctcgaggagg aatgggccgc gaatgaagcc gttggtggcg ccgaccaggc
      601 gcatgatggt gatctcgcgg gcgcgttgca gcacggtaat gcggatggtc acgccgatga
      661 tcaccacggc caccgccgca aacgcgagcc cgatggtcag gcccaccacc ccggcgatgt
      721 tccgcaggcg atcgagcttc tcgatccatt cccggccgta gcggatgtcg tcgatgaagc
      781 catacccccg gagccggtcg gccacggccg acgtgtgctc ggcgtcgcgg aagccttcct
      841 tgagctggat ctcgagcgag gcggggaggg gattcaccga gaggtcgcgg taggcgtcgc
      901 ggaactccac cagctcggcc cgggcccgct tgagggcttc ttcctcgctg acgaacgtga
      961 cccgctgtac ctcggggaag gccgcgatgt cctgcgaggc ctgcgcgatg gtttcggccg
     1021 gcgtgccgcg gaggagatag gcgaccactt cgacccgctg ctccacgatc cggagcgcct
     1081 cgcgcaggtt caccgccacc agggcgaaca gccccaccgc gtacagcgaa aagccgatcg
     1141 tcgtgatgga gagcgcggag aggagggggg cccgtcggaa ggccagcagc gcctcgcgga
     1201 acaagagtct catgccagct ccggctcggc ggtttgctcg tcctggccgc tgtcgaagac
     1261 gatggcgccg tcgcgcatct cgacgttccg gtaggtggtc tgcttgacca ggtcgaggtc
     1321 gtgtgtcgcc atcaccacgc aggtgccggt cgcgttgatc tcgcggatca actggaagac
     1381 gccgcgggtg gcgcgctcgt cgaggttccc ggtgggctcg tcggcgagga ggatcgtggg
     1441 gtcgttgatc agcgcccggg cgatggccac ccgctgctgc tcgccgccgg agagctcctg
     1501 cgggtaggca tgcgccttgg cggcgaggcc cacctgggtg agcgcccgca tcacccgcgc
     1561 cggaatcgcg tcagcgcggg cgccggtcac ctcgagcgcg aaggcgatgt tctcttcggc
     1621 cgtgcgatct tccagcaggc ggaaatcctg gaacacgacg ccgagccgcc gccggagccg
     1681 gggaatctcg gcctgggtga tggagccgat gttgaacccg gagacgcgga catcgccgtg
     1741 ggtaggccgg agcgccccgt acatcagctt gagcatggtc gacttcccgg cgccggagtg
     1801 gccggtgagg aagacgaact cgcccttcgc gatgtggagg gaaacgtcct tgagggccac
     1861 gcccttcgga tagtccttgg tgacgtgatg gaagcgaatc acggggggaa gataggagta
     1921 actattggcg gagtaaagcg ttagaagggc ttgtggcttg aggtcggggg ctggctgtcc
     1981 cgaaccccca agccccaagc cccagacctc aagcctatcc cagtgcctgt tccaggtcgg
     2041 cgatgatgtc ctccgagttc tcaaggccgc aagagaggcg gacgaagccg tcggggattc
     2101 cctgcttggc ccgctggtct tcggtcagct tccggtgaga ggtgagccgg ggctccgaga
     2161 tcaggctctc gacgccggcc aggctcggcg cgtgacggac cagtttgagc ttcttgagga
     2221 acttctccgc cgcgcgggcg ccgcccttga gctcgagtcc caccataccg ccgaagccgt
     2281 cgaggaccga ggcggcatag gcatggtcgg gatgcgatgg gaggccgggg tagtgcaccc
     2341 gcacgatcgc atcgcgggtc tcgccccagc gcgcgaccgc catgccgttc acgttatggc
     2401 gctgcatccg gacatcgagg gtacggagcc cgcgctccac cagccaggcc gcatgcgggt
     2461 cgatggcctg gccccagagg gtcatgagcc gggtgacctc ctcgatgatc gagctgctgc
     2521 ccgcgaccgc gccggcgatc acatcgctgt gaccgttgag atacttggtg gcgctgctga
     2581 tgacgatatc ggcgccgtgc tcgagcgggc ggaagttgat cgggctcgca aagctggcgt
     2641 cgaccaggag cgccaggccg ccgtcgcgcg caatctgggc catgggcgtg aggtcgacca
     2701 cccgcatcgt cgggttggtc ggtgtctcca cgaaaatggc gcgggtgctc ttgcgcaccg
     2761 agcggcgcca catccggggg tgatccggct gcacgtaggt gacttcgatg cccagccggc
     2821 cgaactcctc gtcgaagagg cgacgggtgc cgccatagat ccagctgctc gtgatgaggt
     2881 gatcgccggg gcggagcacc gcgaggtggg ccagcgccgt cgcccccatc ccgctagcga
     2941 cgaagatcgc ggcctcggct ccctcgagaa gcgcgtattt ggcggccagc gcgacctggt
     3001 tggggttgtt cccgtagcgc gagtacatca cctcctcgcc ggacccgacg gggttggtga
     3061 aggtactgct ctggaagatg ggcgcgacga cgggggtcca gtcgccctga cgcgatggaa
     3121 cgccgtgaat ggcgagggtg gagagaccga tcttccgctt catcgggaat ccgtcagggg
     3181 gagagtggct ccgagccgag gggaaccatg aagccggcct cgccgcgaat gacgagccgc
     3241 aaccggttga gggcgttgag cactccctcg gcgcgctcga ccggccagcc ggtgtggccg
     3301 gccagctcgt cgggggtggc cggcccatgc tgctggaggg tgaagaaggc ggtgcggagg
     3361 tcgggcgata cccgtcccac gatgcgggcc acaccgagca ccgggtcgcg caccagggcg
     3421 gcgaggtcgt gatgctccag cacgtgctcg atcgcctcga gctgctcctc gcgcagtccc
     3481 tggagcacga tggcggtttc gctcaccggc tcgaggagga gcttggcgat gacttcatcg
     3541 gcgcagctga agtcgaccag tcccacttcg gagaagtcga gcagcgtcag ggtggtgtgg
     3601 atcgcggtca gccgctgctg gatgctgctc cgcaccgccc ggccggtggg gcgggtgacc
     3661 aggtcgcagt aggggctctg gaccgtctcg cgcaggagct gctcgacccg aatcgtctgt
     3721 gtcatccggc ggccggctcc tgggctggaa tcacgatctg cagctgggcg cccgggaacg
     3781 gcgcgaggtg ttcggtcatg ggcggttcgt catcccagtc gggcacgatg gcaatccggg
     3841 cggtgccgct ccggatggag agctttccgc tccagcgtcc caggtagcgc ttgatgccgg
     3901 cgattccctg cccgcggccc gggtcacgga accggctcac attctggatc accgccgcct
     3961 cgagcgcggc gccatcgccc cagcggtcac cgaaacgccg ggactgggtg gcttcgagcg
     4021 agcggcgaaa gccgaccccg ccatcgctca ccgcgatcac cacaacccgc ctgcccaggc
     4081 gcttgcggaa ggtgtacgcg tgcacggcga cccaaccacc ggtgccggca tgctccacaa
     4141 tattctgaca tgcctccgaa agtgccatgg caaagcccat agtcgccttg gcgtcgatcc
     4201 ccagctcatg ggtca
//
LOCUS       DATIFF010000309         6559 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_348866, whole genome shotgun sequence.
ACCESSION   DATIFF010000309 DATIFF010000000
VERSION     DATIFF010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6559
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_348866"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1162)
                     /locus_tag="VLD58_04450"
     CDS             complement(<1..1162)
                     /locus_tag="VLD58_04450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53578.1"
                     /translation="MTSSAPTGPPTTTPAPAACPRCTTVNRTVARYCKGCGERLASQN
                     DPFGELAGIDAIARAVRAQLEDAVLVRKQGHAVRSHRLILGSPGAGTTRLARAIADCA
                     ERVGLTSKGATLVTARELRSQKPEDLLSAAAGGTLIIDQAHRLLPAPDVPSGGEQALF
                     DLLDALANRGDGSDPLVLVTGAPGPFAPFLRPDAALPRHFGEILRLDDWSADQLALVS
                     RRRLVAQGWTLDDAMSARLLARCRYLVNAVDLPRRHGHAVDELVQLTTQTARTRLGGA
                     TGGALVEGDIAGPVDQPVSLEELFAQLDTLQGIDAVREQLKQMIRAAQERKARDPGRP
                     VLDGHVLLMGNAGTGKTTIAKLLPRLLCKAGILPTERLVEFANPGSLQAGYVG"
     gene            complement(1159..4272)
                     /locus_tag="VLD58_04455"
     CDS             complement(1159..4272)
                     /locus_tag="VLD58_04455"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB53579.1"
                     /translation="MSQDQPSSPSVPSNINVATTAMPAHAAVATTAVPTHLNQATTAM
                     PVAGGSAPTSATPRLSSHVAGDVLALGRFQLTIERLLYVGGQAELYVVSGGPEQRTVL
                     KLYTQGARPKPDVLDRWRVLPHSAVIALLDADPFAEPRAWELLAFAEGGPLAGGGEAP
                     LGPIKDQVRLRSIIQQSAAALHTLHTTGGVVHRDVSPDNFLWLDTARTRLVLSDLGSS
                     SIMSGGAAKSGTIRGKLPFMAPEELLPMGDGVVVGEAADFYALGIMVLTLWAGQHPFV
                     GREADQIALKSRGAVPMPPDLPPDLQSLAEALLLPANIRLTYDGIQRWLSGQAIPRAM
                     APRNLSYPRLTVRPAQGAPYEVDTPTGLARFLLDEPVAGERFLYAWNMREWASADAGL
                     VADLTDIVEKEFPKNRGAGRQKAAYLLDATLPFAAPDGTICRDYAELSAWLEADPERP
                     KGLVDPAHPLWLYLATRPENELREAMADLDADVRAGKPEATAVIRHYLMQFAAAGAWR
                     DGDGTIVTELSTFLERLKDRAKDNYNRLLDPADPLTLWLETHLPGTAERVGRLRTLPQ
                     QARATLAPIDWISCALNSVQAIHGVTLLTPEDAWKDDLWARAADGEAGMGQFLDGWWR
                     VVEEGRFGNAALEWLAGRPTTGARAQVTIALLADQWQVTGRPLSHVLATAFAALPAWS
                     SDPANAKVVQAAGSAVIKQLEAIRDGADPEHQALVQLDAATALAHAASSARASAPGWW
                     DALMAWIGGQLTDTVRAAFAQYRQAPNVLGDVIGRRTELQGALAPFRMPVLARWSAED
                     TRRKALEQELAVQEGRQRDARLQAINDKAIELRGTPHVATINQLKTTQPPLARKLFRT
                     GLAGLVGFTAYTIGAWMVRHVDMRRFSENDVQYLIPILGAMVIMLICTWIAVRAWRGR
                     FLAFIACFLVFADGGRRFDANGGFIRYTSLRSGVFLLITLILAVALFLKWRHTRNVSG
                     TADAQARDVPPELAASVKKACNEAESLGRAALAERWLMLYAVLALAVDPAQVKVEQVP
                     GAAQSAA"
     gene            complement(4269..5147)
                     /locus_tag="VLD58_04460"
     CDS             complement(4269..5147)
                     /locus_tag="VLD58_04460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HSB53580.1"
                     /translation="MSHPDARAAAPAAATVSTAAVAGAPLRQLAVACPRCGAPVPSPA
                     SDFCEHCSAHLYPGHCVFCLEPFAPGQAHCRQCGLPPEGVICGACGTFSRFDFCPNPD
                     CGAGLTPRAAAELERLGSDPEAVQAFAELDEIGTVLAELSRPAPLPEAAPVERVTAQA
                     APQPAAPPASAGATRPSLAALRAAAREARSAEEKAKVRALAEQAAQDALLSVSTRTFP
                     SAQEARAAGNALQVALRFREVSQKLEVIAWRCNAFSCEHPMPAGMALCSDPSRGGVPV
                     TRVIEEIVEGNAEFTV"
     gene            complement(5154..6071)
                     /locus_tag="VLD58_04465"
     CDS             complement(5154..6071)
                     /locus_tag="VLD58_04465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53581.1"
                     /translation="MRASLLGILGVSVLALAACGGGDGGTGPGGGGAGMSAKINANAW
                     AADQVQVTLGSAQIPGSVIITGTKVSGTSTSSISLILGYISGPGTYPLGVNQGTSAGG
                     TGLLLETSPATAENRTTPFNGNGGTVVISSLTAGHLTGTFSFIAVPILGSQFTGNKQI
                     TNGDLDIDLPSPLTAVPAANHGSSVSATLGTTPFNGATVVGLGSGGSFSFGGNSDSLT
                     IDFVTAVPVTVAGTYPLLTGIKVSVTDLKQNHNWGGVSGDVGSVIVTSVANGRVKGTF
                     SGTLHSLTQGLADLAMANGTFDVRIDSSP"
     gene            complement(6145..>6559)
                     /locus_tag="VLD58_04470"
     CDS             complement(6145..>6559)
                     /locus_tag="VLD58_04470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53582.1"
                     /translation="LPAGFTDLGTTNYGSDVHATLDGTLWTGATNLGLGANGVFALGG
                     QTTKYSLQILNTTPVAGAVTFNMLAGAKVTLLDFETGHSWGGISGDSGTIHYNGVVDG
                     VRTLGNFSGKLAPNFQGGSPVVVTNGSFNVRVDAP"
BASE COUNT          991 a         2287 c         2297 g          984 t
ORIGIN      
        1 ggcccacgta gccggcctgc agcgagccgg ggttggcgaa ctccaccagg cgctcggtcg
       61 gcaggatccc ggccttgcag aggaggcgtg gcagcagctt cgcgatggtg gtcttgccgg
      121 tgcccgcgtt ccccatcagc agcacgtggc cgtccagcac cggccgcccc ggatcgcgcg
      181 ccttccgctc ctgtgccgcc cggatcatct gcttgagctg ctcccgcacg gcgtcgattc
      241 cctggagcgt gtcgagctgg gcgaagagtt cctcgagact caccggctgg tccaccggcc
      301 ccgcgatgtc gccctcgacc agcgccccac cggtggcacc gccgagccgg gtgcgggccg
      361 tctgggtcgt gagctggacc agctcgtcca ccgcgtgacc gtggcgccgg gggaggtcaa
      421 ccgcattcac caggtagcgg caccgcgcca gcaggcgggc actcatggcg tcatccagcg
      481 tccatccctg cgccaccagg cgacggcgcg acaccagcgc gagctgatcg gcggaccagt
      541 cgtccagccg caggatctca ccgaaatggc ggggcagcgc cgcgtcggga cggagaaacg
      601 gggcgaaggg accgggtgct ccagtcacca gcaccagcgg atcgctgccg tcgccccggt
      661 tggccagcgc atcgagcaga tcgaacagcg cctgctcccc accgctcgga acgtcgggcg
      721 cggggagaag ccggtgggcc tggtcgatga tgagggtgcc gccggcggcc gccgagagca
      781 ggtcctccgg cttctgcgag cggagctcac gggcggtgac gagcgtggcg cctttgctgg
      841 tgaggccgac ccgctcggcg cagtcggcga tggcgcgcgc cagccgggtg gtgcctgcgc
      901 cgggcgagcc gaggatcagc cgatgggagc gaaccgcatg gccctgcttg cggaccagca
      961 ccgcgtcctc cagctgggcc cgcaccgccc tggcaatcgc atcgatcccg gccagctcgc
     1021 cgaagggatc gttctgcgag gccagacgct cgccgcagcc tttgcagtag cgggccaccg
     1081 tgcggttcac ggtggtgcat cgggggcagg ccgccggcgc cggagtggtg gtcggcgggc
     1141 cggtgggggc tgaactcgtc atgccgccga ctgtgccgcg ccgggaacct gctccacttt
     1201 cacttgcgcc gggtcgaccg cgagcgccag caccgcatac agcatcagcc accgctcggc
     1261 cagcgccgcg cggccgaggg actcggcttc gttgcacgcc ttcttcacgc tggcggcgag
     1321 ctccggtggg acatcgcggg cctgggcgtc ggccgtaccg ctcacgttgc gggtatggcg
     1381 ccatttgaga aacagcgcca cggcgaggat cagggtgatc agcagaaaga cgccgctacg
     1441 gagactggtg tacctgatga acccgccgtt ggcatcgaac cgccgcccgc cgtcggcgaa
     1501 gaccaggaag caggcgatga acgccaggaa ccgcccccgc caggcccgga ccgcgatcca
     1561 ggtgcagatc agcatgatca ccatcgcgcc gagaatggga atcaggtact ggacatcgtt
     1621 ctccgagaag cgccgcatgt cgacgtgccg gaccatccag gcgccgatgg tgtacgcggt
     1681 gaagcccacc agacctgcaa gcccggtgcg gaagagtttc cttgccagag gaggctgggt
     1741 ggtcttgagc tggttgatcg ttgccacgtg cggcgtgccg cggagctcga tcgccttgtc
     1801 attgatggcc tggagccgtg catcgcgctg ccggccctcc tgcaccgcca gctcctgttc
     1861 cagcgccttg cgccgggtat cctccgccga ccagcgcgcc agcaccggca tccggaacgg
     1921 cgccagcgct ccctgcagct cagtcctgcg cccgatcacg tcaccaagaa cgttgggcgc
     1981 ctgccggtac tgggcaaagg ccgcgcgcac cgtgtccgtg agctggccgc cgatccaggc
     2041 catcagggca tcccaccagc ctggagcact cgcccgcgcc gagctggcgg catgcgccag
     2101 cgccgtggcc gcatcgagct ggaccagggc ctggtgctca ggatccgcgc catcgcggat
     2161 cgcctcgagc tgcttgatca ccgcgctgcc cgccgcctgc accactttcg cattggcggg
     2221 atcgctgctc caggccggga gcgcggcgaa tgcggtcgcc agcacatggc tcagaggccg
     2281 gccggttacc tgccactgat cggcgaggag cgcgatcgtc acctgggccc gtgcacctgt
     2341 ggttggccga ccggcgagcc attcgagcgc cgcgttcccg aagcgtcctt cctccaccac
     2401 ccgccaccag ccgtcgagga actgccccat gcccgcctcg ccgtcggcgg cgcgggccca
     2461 gaggtcgtcc ttccaggcgt cctcgggcgt gagcagcgtg acgccgtgga tcgcctgcac
     2521 cgagttgagg gcacagctga tccagtcgat gggcgcgagg gtcgcgcgcg cctgttgcgg
     2581 cagcgtgcga agccgtccca cccgttcggc agtgccggga agatgggtct cgagccacag
     2641 cgtgagcgga tcggcgggat cgaggagccg gttgtagttg tccttggcgc ggtccttgag
     2701 ccgctcgagg aaggtcgaca gttcggtgac gatcgtgccg tcgccatcgc gccaggcgcc
     2761 ggccgcggcg aactgcatca ggtagtggcg gatgaccgct gtcgcctcgg gcttgccggc
     2821 ccgcacgtcg gcgtcgaggt cggccattgc ctcgcggagt tcattctccg gtcgggtggc
     2881 gaggtagagc cagagtggat gggcgggatc caccaggccc ttgggccgct cggggtcggc
     2941 ttcgagccag gcgctcagct cggcgtaatc ccggcagatg gttccatccg gagccgcgaa
     3001 cggcagggta gcatcgagga ggtacgctgc cttctgccga cccgcgcccc ggttcttggg
     3061 aaactccttc tcgacgatat cggtgagatc ggccaccagc ccggcgtcgg cgctggccca
     3121 ctcccgcatg ttccaggcgt agaggaaccg ctctcccgcc accggctcat cgagcagaaa
     3181 ccgcgcgaga ccggtcggcg tgtccacctc atacggcgca ccctgcgccg gccggaccgt
     3241 gagcctggga tagctgaggt tccgcggcgc catggcccgg ggaatcgcct gccccgaaag
     3301 ccagcgctga atgccgtcgt aggtgagccg gatgttcgcc gggagcagga gcgcttcggc
     3361 cagactctgg agatcgggcg ggagatccgg cggcatcggc accgcaccac gcgacttgag
     3421 cgcgatctga tcggcctccc gccccacgaa cggatgctgc ccggcccaga gcgtcagcac
     3481 catgatgccg agggcgtaga agtcggcggc ctcgcccacc accacgccgt cgcccatggg
     3541 gagcagctct tccggggcca tgaagggaag cttgccgcga atcgtgccgc tcttcgcggc
     3601 gccgccgctc atgatgctgg aggaaccgag atcgctcagg accagccggg tgcgggccgt
     3661 atcgagccag aggaagttgt ccggcgacac gtcgcggtgc accacgccgc cggtggtgtg
     3721 cagcgtgtga agcgcggcgg ccgactgctg gatgatgctc cgaagccgga cctggtcctt
     3781 gatcggcccg agcggcgcct ccccgcctcc cgccagcggc ccgccttcgg caaaggcgag
     3841 cagctcccag gcccgcggct ccgcgaaggg gtcggcatcg agcagcgcga tgacggccga
     3901 gtgcggcagg acccgccagc gatcgagcac atccggcttg ggccgggccc cctgggtgta
     3961 cagcttgagc accgtgcgct gctccggccc gccgctcacc acatacaact cggcctgacc
     4021 cccgacgtag agcaggcgct caatagtcag ctggaaccgg cccagggcca ggacgtcgcc
     4081 ggcgacatga ctcgagagcc gcggggtcgc gctggtgggc gcggagccgc ccgccaccgg
     4141 catcgcggtc gtcgcctgat tgaggtgcgt cggcactgcg gtggttgcga ccgccgcgtg
     4201 cgccggcatg gccgtggtgg caacgttgat gttggacggc accgatggcg acgacggctg
     4261 atcctggctc ataccgtgaa ctccgcgttg ccttccacga tctcctcgat cacccgggta
     4321 accggcacac cacctctgct cggatcggag cacagcgcca tcccggcggg catcgggtgc
     4381 tcgcagctga aggcgttgca gcgccaggca atgacttcga gcttctgact gacctcgcgg
     4441 aagcgaagcg ccacctgcag cgcattcccg gccgcgcgcg cttcctgggc cgacgggaat
     4501 gtgcgggtcg acacgctgag cagcgcatcc tgcgccgcct gctctgccag ggcccgcacc
     4561 ttggccttct cttccgcgct ccgggcttca cgcgcggcgg cacgcagcgc cgcgaggctc
     4621 gggcgagtgg cgccggcact cgccggcggt gcagccggct gcggtgccgc ctgcgcggtg
     4681 acccgctcga ccggcgcggc ctccggcaac ggcgcgggcc gactcagctc ggcgagcacc
     4741 gtcccgatct cgtccagctc ggcgaacgcc tgcaccgcct ccgggtcact gccgagccgc
     4801 tccagctcgg ccgcggcccg gggcgtgagc cccgcgccgc agtccgggtt gggacagaag
     4861 tcgaaccggc tgaaggtgcc gcaggcgccg cagatcactc cttcgggcgg cagcccacac
     4921 tggcggcagt gggcctggcc gggtgcgaag ggctcgaggc agaacacaca gtgccccgga
     4981 tagagatggg ccgagcagtg ttcgcagaaa tcgctcgcgg ggctcggtac cggcgcaccg
     5041 cagcggggac aggccacggc aagctgcctg agcggcgcac cggcgacggc cgcggtcgaa
     5101 accgtggccg ccgcgggggc cgccgcccgt gcatcaggat ggctcatggg tcgtcagggc
     5161 gaagaatcga tgcggacgtc gaaggtaccg ttggccatgg ccaggtcggc cagaccctgg
     5221 gtcagcgagt gcagcgtccc gctgaaggtc cccttcaccc ggccattggc aacgctggtc
     5281 acgatcaccg atcccacgtc acccgagacg ccgccccagt tgtggttctg cttgagatcg
     5341 gtcaccgaca ccttgatgcc ggtgaggagt ggataggtgc cggccacggt caccggaaca
     5401 gcggtcacga agtcgatggt caggctgtcg ctgttcccgc cgaaggagaa cgagcccccg
     5461 ctccccaacc ctaccaccgt ggctccgttg aacggcgtgg tgccgagcgt cgccgagacg
     5521 ctgctcccat ggttggccgc cggcaccgcg gtgagcgggg acggcaggtc gatgtccagg
     5581 tcgccgttcg tgatctgctt gttgccggtg aactgcgagc ccaggatcgg cactgcgatg
     5641 aacgagaagg tgccggtgag gtggccggcc gtaagcgacg agatcaccac ggtccccccg
     5701 ttgccattga acggcgtggt gcggttctca gccgtcgcag gcgacgtctc gagcaggagg
     5761 ccggtgccgc cggcactggt gccttgattc accccgagcg ggtaggtacc gggcccggag
     5821 atgtagccca ggatgaggct gatgctggag gtgctggtcc cgctcacctt ggtcccggtg
     5881 atgatgacgg agccgggaat ctgggcgctc cccagcgtga cctgcacctg atcggccgcc
     5941 caggcattgg cgttgatctt cgccgacatc cccgctccac caccgcccgg tcctgtgccg
     6001 ccgtcaccac caccgcacgc agccagggcc agcaccgaca cgcccagaat gccgagaagt
     6061 gaggctctca tgtgcgacct gccttcaatt gtggaccggg ttggactaag gtgcaggccg
     6121 aatcccgagg gggcaagccg cgcctcaggg cgcgtcgacc cgcacgttga agctgccgtt
     6181 ggtgacgacc acggggctcc cgccctggaa gttcggggca agtttcccac tgaagttccc
     6241 cagggtgcgg acgccatcga ccacgccgtt gtaatggatc gtccccgagt ccccgctgat
     6301 cccgccccag ctatggccag tctcgaaatc gagcagggtg accttcgcac ctgcgagcat
     6361 gttgaaggtc accgctcccg ctaccggcgt ggtgttgagg atctggaggc tgtacttcgt
     6421 ggtctggccg cccagcgcga ataccccgtt ggctcccagg cccaggttgg tggcgccggt
     6481 ccagagagtc ccgtccaggg tggcgtggac gtcgcttccg tagttggtgg tgccgaggtc
     6541 ggtgaatccc gccggaaga
//
LOCUS       DATIFF010000310         4041 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_196202, whole genome shotgun sequence.
ACCESSION   DATIFF010000310 DATIFF010000000
VERSION     DATIFF010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4041
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196202"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3120)
                     /locus_tag="VLD58_04475"
     CDS             complement(<1..3120)
                     /locus_tag="VLD58_04475"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB53583.1"
                     /translation="MNDLRARLERALGSGYVIERELGGGGMSRTYLATEEALRRHVVI
                     KVLAPELLAGISVERFRREVLMAAKLQHPHVVPVLTTGETEGLPWFTMPYVEGDSLRR
                     RLEKGPVGIGEAVSILRDVARALSYAHSHGIVHRDIKPDNVLLSAGSATVTDFGIAKA
                     ISVARTTDGGGNMTLTQAGTSIGTPTYMAPEQALGDPETDHRADIYSFGAMAYEVLSG
                     QPPFSASNPSRMLAAHLGEAPRDIRTLRADTPAPLADLVMQCLAKEPAGRPQQASDLV
                     RVLETVTTSGSAASVPGVLHGGRIRLGRAIAIWAGATALVTLTAWAATEVIGLPDWAL
                     PGSLGVMLAGLPIIGLTAYVQRTTHRVFTATPQMTPGGTPSPQGTLATLAVRVSPHVS
                     WRRTWLGGAIAVGAFVALVVGFMVLRALGIGPMGSLRGKGAFGAQETILVADFRGPPA
                     DSTLGSTVAEALRTDLAQSTSLKVLTRANVRDILALMQRPTESTVPFELAREIATREG
                     AKAVLDGAIVQLGQSYVISARLVASLDGAELAAFRETSPNEDGLIGAIGKLSRAVREK
                     AGESLRAIQASSELERVTTPSLPALRKYVEGSKVADEGGDTERGLTLLQEAVTLDSGF
                     AMAWRKIAVLLGNENRDAPRALVAISTAYRHRTRLTEMERLLTEGYYFTRGPTPDRDK
                     AIAAYEDALRIDSTSTSALNNAAVVYGDKRENARAEELYRRVTNLPRTFGGAFTNLIT
                     TQILNHRSGAALDSTAAAFRARFPNSNDLWEADWYAAWGKGNLDAADSIARVIQANPR
                     TPRQQIRSAAGRVGVAELRGQTSEALRWLTVSDQAAVRIDPSASTRLQSAIDSVMLLA
                     QYSRDRARARGILERGLARVPLTEIPATDRPYDMLARLSLMLEDPALARQAAQGWERD
                     QRTSVEDSIGSRAFYQAHVALTEKRWNDGIALLREADARFAIAPRYGQVLLARAFDGA
                     GQPDSAIAHYESFLALAQAIPFPGTSWRARSHERLAELYESKGDLPKASEHYARFIEL
                     WEHADPELQP"
     gene            complement(3271..>4041)
                     /locus_tag="VLD58_04480"
     CDS             complement(3271..>4041)
                     /locus_tag="VLD58_04480"
                     /inference="COORDINATES: protein motif:HMM:NF019127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1259 domain-containing protein"
                     /protein_id="HSB53584.1"
                     /translation="STPVDGGGYVRFNFPRKDLTVHVGDVTIPAPFALTGWVGFDGTP
                     DQATAMGDQVVTATELGPVLAALAREQVEVSAIHNHLAGEEPQVTYIHFHAMGPAAAA
                     ARALDKVLQLTGAPRPVTAAAPVPVTIDSAAVFAALGKHGKASGAMAQVGFVLVPGNV
                     TIDGARVLPALGYGSPINVLKVAPNRAVATGDFAVTAEQLPRLLSALAGGGITAMAVH
                     HHLVGEVPKIYFVHFWGDAALPDLLGGLRAALDAVRPD"
BASE COUNT          613 a         1360 c         1451 g          617 t
ORIGIN      
        1 gggctggagc tccggatcgg cgtgttccca cagctcgatg aaccgggcgt agtgctcgga
       61 cgccttgggc aggtccccct tcgattcata gagctcggcc agccgctcgt ggctccgggc
      121 ccgccagctc gtcccgggga acgggatggc ctgagccagg gcgaggaagc tctcgtagtg
      181 ggcgatggcc gagtcgggct ggccggcgcc atcgaaggcg cgcgccagca ggacctggcc
      241 gtagcgcggc gcaatggcga agcgggcatc cgcctcgcgg agcagggcga tgccgtcgtt
      301 ccagcgcttt tcggtcaggg ccacgtgcgc ctggtagaag gcccggcttc cgatggagtc
      361 ctccacgctg gtgcgctgat cgcgctccca gccctgggcc gcctgccggg cgagcgcggg
      421 atcttcgagc atcagggaaa gccgcgccag catgtcatag ggccggtcag tggcgggtat
      481 ctccgtcagg gggacccgcg cgaggccgcg ctcgagaatg ccgcgggccc tggcgcgatc
      541 gcggctgtac tgggccagca acatcaccga gtcaatcgcg gactgcagcc gggtgctcgc
      601 tgagggatcg atccggaccg cggcctgatc ggagaccgtg agccagcgca gcgcctccga
      661 cgtctggccc cgtaactccg ccactccgac gcgtccggct gcgctccgga tctgctgccg
      721 cggagttcgc gggtttgcct gtatgacacg cgcgatcgag tcggccgcgt cgagattgcc
      781 cttaccccat gcggcgtacc aatccgcttc ccagaggtcg ttgctgttgg ggaatcgggc
      841 ccggaacgcc gcggcggtgg agtcgagcgc cgcccccgag cggtggttca ggatctgggt
      901 cgtgatcagg ttggtgaacg ccccgccgaa ggtccgcggc aggttggtca cccggcggta
      961 cagctcctcg gcccgcgcat tctcccgctt gtcaccatag acgacggccg cgttgttgag
     1021 ggccgacgtg ctggtggagt cgatccggag cgcgtcctcg taggccgcga tggccttgtc
     1081 ccggtcgggc gtggggccgc gggtgaagta gtagccttcg gtcagcagcc gctccatctc
     1141 ggtgagacgg gtccggtgcc ggtaggccgt ggagatggcc acgagcgccc ggggagcgtc
     1201 gcggttctcg ttgccgagca gcaccgcgat cttgcgccag gccatggcaa agccggagtc
     1261 gagcgtcacg gcctcctgca ggagcgtcag cccccgttct gtgtcaccac cctcatccgc
     1321 cactttcgag ccttccacgt acttccggag cgccggcaga gacggggtcg tcacccgctc
     1381 gagctcggag ctggcctgaa tggcgcggag cgactcgccg gccttctcgc gcaccgcgcg
     1441 ggagagcttg ccgatcgccc cgatcaatcc atcctcgttg ggtgacgtct cccggaaggc
     1501 ggccagctcg gcgccgtcga gcgaggcgac caggcgggcg gagatcacat acgactgacc
     1561 cagctgcaca atggcaccgt ccagcaccgc cttggccccc tcacgggtag cgatctcgcg
     1621 ggccagctcg aacggcaccg tgctttcggt cggccgctgc atcagggcga gaatgtcccg
     1681 cacgttcgcc cgggtcagca ccttgagcga ggtcgactgg gccaggtcgg tccggagcgc
     1741 ctcggccaca gtgctgccga gcgttgaatc ggccggggga ccgcggaaat cggcgacgag
     1801 aatcgtctcc tgcgctccga aggcgccttt gccgcggagc gaacccatcg gaccgatgcc
     1861 gagtgcgcgg agcaccatga accccaccac cagcgccacg aaggcaccga ccgcgatggc
     1921 gccgccgagc caggtgcgcc gccaggagac atggggactc accctgacag cgagcgtggc
     1981 gagggttcct tgtggtgaag gcgtacctcc cggtgtcatc tgcggtgtgg cagtgaagac
     2041 ccggtgggtg gtgcgctgga cgtaggcggt gagcccgatg atcggcaggc ctgccagcat
     2101 cacgccgagg gagcccggca gcgcccagtc ggggagcccg atcacttcgg tcgcggccca
     2161 ggccgtgaga gtcaccagcg cggtggcgcc ggcccagatc gcgatcgcgc ggccgagacg
     2221 gatccggccg ccgtgcagca caccgggaac cgaggccgcg ctcccgctgg tcgtcacggt
     2281 ctcgagcacc cgcacgaggt cactcgcctg ctgcgggcgg ccagccggct ccttggccag
     2341 gcactgcatt accaggtcgg cgagcggcgc gggggtgtcg gctcggaggg tccggatatc
     2401 gcgcggcgcc tcgcccaggt gcgccgccag catccgcgat ggattgctcg cggagaacgg
     2461 cggctggccg gagaggacct cgtaggccat cgccccgaag gagtagatgt cggcgcggtg
     2521 atcggtctcg gggtcgccca gcgcctgctc gggggccatg taggtcggcg taccaatgga
     2581 agtgccggcc tgggtcagcg tcatgttgcc gccgccatcg gtggtccggg cgaccgagat
     2641 ggccttggcg atgccgaagt cggtgacagt ggcgcttccg gccgagagca ggacgttgtc
     2701 cggcttgatg tcgcgatgga cgatgccgtg gctgtgggcg taggacaggg cccgagccac
     2761 gtcccggagg atgctcaccg cctcgccgat gcccaccggc cccttctcca ggcggcgccg
     2821 gagactgtcg ccctcgacgt agggcatggt gaaccagggc agcccctcgg tctccccggt
     2881 cgtgaggacc ggcaccacat gggggtgctg gagcttcgct gccatcagta cttcacgccg
     2941 gaaccgctcc accgagatgc cggcgagcag ctcgggggcc aggaccttga tgacgacgtg
     3001 ccggcggagt gcttcctcgg tggcgaggta ggtgcgggac atgccgccgc cgcccagttc
     3061 ccgctcgatg acgtagccgg agcccagcgc ccgctcgagt cgggcacgca ggtcgttcat
     3121 tcaatcctca gggggtacgg tggcgacggg cagaattgcg tcccaggccg ggtggggacg
     3181 gcccggaaga atctaaggta cggagagttc cccgctaggt tcggagccgg ggagttcgaa
     3241 tcgagccact gagcctgctc gtgtcaccgc tcagtctggt cggacggcat ccagcgcggc
     3301 gcgaagccca ccgagcaggt cgggcagcgc cgcgtcaccc cagaaatgca cgaagtagat
     3361 cttcggtacc tccccaacca ggtgatgatg caccgccatg gccgtgattc cgccacccgc
     3421 cagcgccgag aggagccggg gtaactgctc ggcggttacc gcgaaatcgc cggtcgcgac
     3481 ggcacgattc ggggccacct tgagcacatt gatgggagac ccatagccga gcgcgggcaa
     3541 caccctggca ccgtcgatcg tcacgttgcc cgggaccagc acgaacccga cctgcgccat
     3601 cgcgcctgac gccttgccgt gcttgcccag tgccgcgaac accgcggccg aatcgatcgt
     3661 gacgggcacc ggagcggcgg cggtgaccgg tcggggcgcg ccggtcagct ggagcacctt
     3721 gtcgagtgcg cgcgccgcag cggccgctgg tcccatcgca tggaagtgga tgtaggtaac
     3781 ctgcggttcc tctcccgcca ggtggttgtg gatcgcggag acctccacct gctctcgcgc
     3841 cagagcggcc agcacgggac cgagctcggt ggcggtcact acctggtcgc ccatcgccgt
     3901 ggcctggtcc ggcgtgccgt cgaatccgac ccagccggtg agcgcgaatg gcgcgggaat
     3961 ggtgacatcg ccgacatgga ccgtgagatc cttgcggggg aagttgaacc gcacgtaacc
     4021 gccaccatcg accggcgtgc t
//
LOCUS       DATIFF010000311         1444 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_656774, whole genome shotgun sequence.
ACCESSION   DATIFF010000311 DATIFF010000000
VERSION     DATIFF010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1444
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_656774"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1444
                     /locus_tag="VLD58_04485"
     CDS             <1..>1444
                     /locus_tag="VLD58_04485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HSB53585.1"
                     /translation="LFDNGRRSKAIRGRGKRPLKSLSDMLKGKQGRFRQNLLGKRVDY
                     SGRSVIVVGPELRLHQCGLPKAMAVELFKPFIIHKLVEKGIAETVKRAKKIVERESPE
                     VYEILEEIIQDHPVLLNRAPTLHRLGIQAFEPVLVEGKAIRIHPLVCAAFNADFDGDQ
                     MAVHVPLSFEAQLEARLLMISSNNILKPSDGRPVAEPSQDMVLGSYFLTKDPAGFEEE
                     LRRAGAGKKDETERRLWKDAKHFGSLAEIEMALLTGVVKYHTPIHFWYVPPRETVDED
                     ARRPRWIRTTVGRVLFNSIVPKAVIVERGYRNYVMKKKQLSELVLEAYRRAGLADTVL
                     FLDRLKEFGFGFATRGGVSIGIEDLEIPTEKADLLSEADARVKRFQRAYNTGQITFGE
                     RYNKVIDAWTHANNDVAEAMVNSMRQSRGGFNPVYMMFDSGSRGSRDQIRQLAGMRGL
                     MAKPQKKLTGGIGEIIESPIKSNFREGLTGL"
BASE COUNT          264 a          467 c          507 g          206 t
ORIGIN      
        1 ccctgttcga caacggccgc cgctccaagg cgatccgggg ccggggcaag cgtccgctca
       61 agtcgctctc cgacatgctc aagggcaagc aggggcggtt ccgccagaac ctgctgggca
      121 agcgggtgga ctactccggc cggtcggtga tcgtggtggg cccggagctc cggctgcacc
      181 agtgcggcct ccccaaggcg atggcggtgg agctgttcaa gccgttcatc atccacaagc
      241 tggtggagaa ggggatcgcc gagacggtca agcgggccaa gaagatcgtg gagcgggaga
      301 gccccgaggt gtacgagatc ctggaggaga tcatccagga ccacccggtg ctgctcaacc
      361 gcgcgccgac gctgcaccgc ctgggcatcc aggccttcga gccggtgctg gtggaaggca
      421 aggccatccg gattcatccg ctggtctgcg ccgccttcaa cgccgacttc gacggcgacc
      481 agatggcggt gcacgtgccg ctctcgttcg aggcgcagct ggaggcacgg ctgctgatga
      541 tctcctcgaa caacatcctc aagccgtccg acgggcggcc ggtggcggag ccgtcgcagg
      601 acatggtgct gggcagctac ttcctcacca aggacccggc cgggttcgag gaggagctgc
      661 ggcgcgccgg cgcggggaag aaggacgaaa ccgagaggcg cctctggaag gacgcgaagc
      721 acttcggctc gctcgccgag atcgagatgg cgctgctcac cggggtggtg aagtaccaca
      781 ccccgatcca cttctggtac gtcccgcccc gggagaccgt ggacgaggac gcccgacggc
      841 cgcgctggat ccgcacgacc gtgggccggg tgctgttcaa cagcatcgtc ccgaaggccg
      901 tgatcgtgga gcgcgggtac cgcaattacg tgatgaagaa gaagcagctc tccgagctgg
      961 tgctggaggc gtaccgccgg gccgggctgg ccgacacggt gctcttcctc gaccggctga
     1021 aggagttcgg cttcggcttc gccacccggg gcggcgtctc catcggcatc gaggacctcg
     1081 agatcccgac cgagaaggcc gacctcctga gcgaggccga cgcccgggtg aagcggttcc
     1141 agcgggcgta caacaccggc cagatcacct tcggcgagcg gtacaacaag gtgatcgacg
     1201 cctggaccca cgccaacaac gacgtggccg aggcgatggt gaacagcatg cgccagagcc
     1261 gcggcggctt caacccggtg tacatgatgt tcgactccgg gtcgcgcggc tcgcgcgacc
     1321 agatccggca gctcgccggc atgcgcgggc tgatggccaa gccgcagaag aagctcaccg
     1381 gcggtatcgg cgagatcatc gagagcccga tcaagtccaa cttccgggaa gggctgaccg
     1441 gcct
//
LOCUS       DATIFF010000312         1576 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1272845, whole genome shotgun sequence.
ACCESSION   DATIFF010000312 DATIFF010000000
VERSION     DATIFF010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1576
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1272845"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            213..815
                     /locus_tag="VLD58_04490"
     CDS             213..815
                     /locus_tag="VLD58_04490"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ANTAR domain-containing protein"
                     /protein_id="HSB53586.1"
                     /translation="MKPQWRVLIVDDHAPSRAAVAEAVTAQGGQVVGNGSRAEDVLRL
                     VDKYRPDVTVLAVGLPDGDGVQAAREVMTVSPCPVVMLTSHTDAPVVARAVDAGVLGF
                     LAKPVRAEELGPTLAVAVHRFREIEAIRQENEQLKRKLESRKLVERAKGILMTRLGLS
                     EPEAFRRIQKTAMDTRKPMAEVAQALLLTEEVGHARPAKL"
     gene            1065..>1576
                     /locus_tag="VLD58_04495"
     CDS             1065..>1576
                     /locus_tag="VLD58_04495"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding protein"
                     /protein_id="HSB53587.1"
                     /translation="MAAVSRRDFLKTAGAIGVGAAAGIGFPAVLRAQGGGTVKVGVLH
                     SLSGTMAISEVSLRDVCMMAFEEINAKGGVMGKKIEAVVVDPASNWDLFAEKAKQLLL
                     QDKVAVTFGCWTSVSRKSVLPVFENNNGLLFYPVQYEGEECSKNVFYTGATPNQQLIP
                     AAEYLMSKEGG"
BASE COUNT          263 a          505 c          576 g          232 t
ORIGIN      
        1 cgcgcagggg ctgctgccgc gcggcaagag cctggacacc atctcggtca gcctctacta
       61 ctcgttcttc taggcgtccg ccccgccggc ccggctgctc agccgacgat caagccgccc
      121 atcggctgag caggcggcgg cgggccgcga tctccaactc cgcggttttc ctcgcgggct
      181 cgctggcacc tcgcttgcta ccccgaacgg gcatgaaacc acaatggcga gtgctcatcg
      241 tcgacgatca cgctccgtcc cgggccgcgg tggccgaagc ggtcacggcc cagggtgggc
      301 aggtggtagg aaacggtagc cgggccgagg acgtgctgcg cctcgtggac aagtaccgcc
      361 cggacgtgac ggtgctggcg gtgggcttgc ccgacggcga cggcgtgcag gccgcccgcg
      421 aggtcatgac ggtttcgccg tgcccggtgg tcatgctcac gagccacacc gacgcgccgg
      481 tggtggcccg ggcggtggac gcgggcgtgc tcggcttcct cgcgaagccg gtgcgggccg
      541 aggagctcgg gcccacgctc gcggtggcgg tgcatcggtt ccgggagatc gaggcgatcc
      601 gccaggagaa cgagcagctc aagcgcaagc tcgagtcccg gaagctggtc gagcgggcca
      661 agggcatcct catgacccgg ctggggctga gcgagccgga ggcgttccgg cgcatccaga
      721 agacggccat ggacacccgg aagccgatgg ccgaggtcgc gcaggccctg ctgctcaccg
      781 aagaagtggg gcacgcccgt ccggctaagc tctagtcgct gccgaaatcg cgggcacacc
      841 gatcggactg cctactcagt aggcagtcct tttggtttcc ggggccggag cccgagcgta
      901 accattcgga aaatcttacc ccgggccggg gcacgcggct tgctctgcca ccgggcggcg
      961 caccgagaca gcggggtcgg tggtgagcgc gccggtaccg gccaggaccg tgacccaacg
     1021 aagggtccgc gacagatcac tgctcggagc gaaaggagac ccgtatggca gcagtctcac
     1081 gcagagactt tctgaagaca gccggcgcga tcggggtggg ggcggcggcg ggcatcggct
     1141 tcccggccgt gctcagggcg cagggcgggg gaacggtgaa ggtgggggtg ctgcactcgc
     1201 tgtccggcac catggccatc agcgaggtgt cgctccgtga cgtctgcatg atggcgttcg
     1261 aggagatcaa cgccaagggc ggggtcatgg ggaagaagat cgaggcggtg gtggtcgacc
     1321 ccgcctcgaa ctgggacctc ttcgcggaga aggccaagca gctcctgctc caggacaagg
     1381 tcgcggtgac cttcggctgc tggacgtcgg tcagccgcaa gtcggtgctg ccggtattcg
     1441 agaacaacaa cggcctgctc ttctaccccg tgcaatacga gggcgaggag tgctcgaaga
     1501 acgtcttcta caccggcgcc actccgaacc agcagctgat cccggccgcg gagtacctga
     1561 tgtcgaagga gggcgg
//
LOCUS       DATIFF010000313         2723 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_196630, whole genome shotgun sequence.
ACCESSION   DATIFF010000313 DATIFF010000000
VERSION     DATIFF010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2723
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196630"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(19..1425)
                     /locus_tag="VLD58_04500"
     CDS             complement(19..1425)
                     /locus_tag="VLD58_04500"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0043138 - 3'-5' DNA helicase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HSB53588.1"
                     /translation="MSQLPARLDEARRQLHGCYGFRDFRPLQRRVVQSVLAGRDTLAV
                     LPTGGGKSICFQVPALVLGGFTIVISPLVALMQDQVSALKARGVAADCLNSLMSREAQ
                     HAVRSRIADRSLRLLYLSPERAERTVQELAAMSLRPSLLAVDEAHCISEWGHDFRPSY
                     RLIGRFRDALGRPPTIALTGSATPAVRQDIVASLGLRKPDLHLGSFDRPNLSFGVVPV
                     RRRRDRAAILLQRLEQRPGLTIVYVSTRNTADALAQRLHFAGLRAMAYHAGLTRERRS
                     EVLERFLAEELDVVTATSAFGMGIDAPRVRLVVHWGMPPTPEAYYQEAGRAGRDGQPS
                     SCLLLNHRADARIHHRQLDVTFPARRVLEEIWEHPDCRRRFPAAVVASADRLAQELAA
                     SPGRVDWSRVERRKDAAVARIRVMERYASSHRCRRQVLLRYFGEEPGPCAGCDACANP
                     RPLGRLHQALELVRARRR"
     gene            complement(1595..1786)
                     /locus_tag="VLD58_04505"
     CDS             complement(1595..1786)
                     /locus_tag="VLD58_04505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53589.1"
                     /translation="MRRARLFSALLGFTLALAGIVTDNQMLVWAAMVALAVALAIRLW
                     SRRRGSGVPPEDSHPTDLR"
     gene            complement(1783..2532)
                     /locus_tag="VLD58_04510"
     CDS             complement(1783..2532)
                     /locus_tag="VLD58_04510"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HSB53590.1"
                     /translation="MLLTTLTDGVLRLTLDRPDKRNALDAATIAELTRALEQAELDAS
                     VRVIAVNGAGKDFCAGADLDELLASADQSPEQNEKAAARLGAVFTAIRRSAHPVVAVV
                     HGRALAGGAGLATACDLVVAAASAQFGYPEVQRGFVPAMVMTMLRRVAGEKRAFDLVA
                     TGRLVTAAEAQDLGLVSQVVPDAGLESSANALLAQLAANSASALALIKRLFYELDGRS
                     FEEGIALGARVNALARAHPDFRTAISAFLKK"
     gene            complement(2537..>2723)
                     /locus_tag="VLD58_04515"
     CDS             complement(2537..>2723)
                     /locus_tag="VLD58_04515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53591.1"
                     /translation="EVERFELPNLKALNFLLHGALDGGGTISLKTDAQGKVYSTALLR
                     MEIPVPPAIARRARSTK"
BASE COUNT          472 a          903 c          983 g          365 t
ORIGIN      
        1 gcggaccgac agaatggctc agcggcgccg ggcccggacg agctccaggg cctggtgtaa
       61 ccgccccaag ggccggggat tggcacaggc atcgcacccc gcgcagggcc ccggctcttc
      121 cccgaaatac ctgagcagca cctgccggcg gcagcggtga ctggaggcat accgctccat
      181 gacccgaatg cgcgccacgg cggcgtcctt gcggcgttcc acccggctcc agtcgaccct
      241 gccggggctg gcggcgagtt cctgagccag ccgatcggcc gacgcgacca cggccgcggg
      301 aaagcgccgg cggcagtcgg gatgttccca gatctcctcc agcacccggc gggccgggaa
      361 agtcacatcc agctgacggt ggtgaatccg ggcatcggcc cggtgattga gcagcaggca
      421 gctggagggc tggccgtcgc gccccgcccg cccagcctcc tggtagtacg cctcgggagt
      481 cggaggcata ccccaatgca ccaccaaccg cactcgcggc gcatcgatac ccataccgaa
      541 agccgatgtc gcggtgacga catcaagctc ttcggccagg aagcgttcga ggacctcact
      601 ccggcgctca cgggtaaggc cggcatggta ggccatggca cggagcccgg caaaatgaag
      661 ccgctgggcc agggcatcgg ccgtattgcg ggtggagacg tagacgatgg tgaggccggg
      721 gcgttgctcc aggcgctgca gcagaatggc ggcgcggtcc cggcgacgac ggacgggaac
      781 cacgccaaag gagagattgg gccggtcaaa ggagccgagg tggagatcgg gtttccggag
      841 cccgagcgag gcgacgatat cctgccgcac cgcgggggtg gcgcttccgg tgagcgcgat
      901 cgtcgggggg cggccgagtg cgtcgcgaaa gcggccgatg agccggtagc tggggcggaa
      961 gtcatggccc cactcgctga tgcaatgagc ctcgtcgacg gcgaggaggc tgggccggag
     1021 ggacatggcc gccagttcct gcaccgtccg ctcggcccgc tcgggcgaaa ggtacaggag
     1081 gcgcagggag cggtccgcga tccgcgaccg caccgcgtgc tgcgcctcac gcgacatgag
     1141 gctgttgagg cagtcggcag cgacgccccg ggccttgagg gccgagacct ggtcctgcat
     1201 cagggccacc agcggcgaga tgacgatggt gaatcctccg agcaccagcg ccgggacctg
     1261 aaagcagatc gacttgccgc cgccggtagg aaggaccgcc agggtatctc gaccggccag
     1321 cactgattgc accacccggc gctggagcgg gcggaagtca cggaagccat agcatccgtg
     1381 gagctggcgg cgggcctcgt cgaggcgggc agggagttgt gacacgggac gaggatatcc
     1441 cgtgcagcag cagcgagtgg cggcgaaata gtccggtgcg gggcgcggaa acgcgtgcgg
     1501 cagtggagaa cccggccggg gggccccccc ccaagttcaa tatcgggtca ggaagcgcga
     1561 gaggttggcg cgggaaaccg cggcgaggac cgccctaacg caggtcggtc gggtgcgagt
     1621 cctccggtgg cacacctgaa cccctgcggc ggctccacag ccggatggca agtgccaccg
     1681 ccagggccac catcgccgcc cagaccagca tctggttgtc ggtcacgatc ccggccagtg
     1741 ccagggtgaa gccgaggagc gcggagaaca gccgagcccg cctcatttct tgaggaatgc
     1801 cgagatggcg gtgcgaaagt cgggatgggc ccgggccagc gcattcaccc gggcgccgag
     1861 ggcgatgccc tcctcgaaac tccgtccgtc gagttcgtaa aagagccgct tgatgagcgc
     1921 gagtgcggag gctgaattcg ccgccagctg cgccagcagc gcgttggcgg aggactcgag
     1981 ccccgcatcg ggcaccacct gcgataccag tcccaggtcc tgcgcttcgg ccgccgtcac
     2041 cagccggccg gtcgccacca ggtcgaacgc ccgtttttcg cccgccacgc gtcgaagcat
     2101 ggtcatcacc atggcgggca cgaacccgcg ctgcacctcg gggtaaccga actgcgcgct
     2161 ggccgcggcg acgaccagat cgcaggcggt ggcaagccct gcccctcccg cgagcgcccg
     2221 gccgtgtacc accgcgacca cagggtgggc cgaccggcga atcgcggtga agacagctcc
     2281 caggcgggcc gcggccttct cgttctgctc cgggctctgg tcggcggagg cgagcaattc
     2341 gtcgaggtcc gccccggcgc agaagtcctt ccccgcccca ttgactgcaa tcacccgcac
     2401 ggacgcatcc agctccgcct gctccagcgc ccgggtgagc tcggcgatgg tagcagcatc
     2461 gagcgcattc cgcttgtccg gacggtccag ggtaaggcgg aggaccccgt cggtgagagt
     2521 cgtcagcagc atggggtcac ttggtgctgc gggcccgccg agcgatggcc gggggtaccg
     2581 ggatttccat ccggaggagt gccgtggagt agaccttgcc ctgggcgtcg gtcttgagcg
     2641 aaatggtccc gccgccgtcg agcgcaccat gcagcagaaa gttgagcgct ttgagattgg
     2701 ggagctcgaa ccgctcgact tcg
//
LOCUS       DATIFF010000314         1682 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1580081, whole genome shotgun sequence.
ACCESSION   DATIFF010000314 DATIFF010000000
VERSION     DATIFF010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1682
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1580081"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..500)
                     /locus_tag="VLD58_04520"
     CDS             complement(<1..500)
                     /locus_tag="VLD58_04520"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSB53592.1"
                     /translation="MTTRLSATDAGPPLIELRDVSKTYPGAAGGFAALAGVSLAIRSG
                     EFAVVVGQSGSGKSTLLGLLAGIDRPTSGEVMVGGTAVHAMPERRMAAWRGRTVGIVF
                     QFFQLLPTLTAIENVMLPMDFCDAWPARERRARALGLLERLGIADQADKLPGRLSGGQ
                     QQRVAIA"
     gene            661..1254
                     /locus_tag="VLD58_04525"
     CDS             661..1254
                     /locus_tag="VLD58_04525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53593.1"
                     /translation="MRFRSIVAAFTLAVPAGLAAQHGGAPAQRLNTVAPAEAKQFDFL
                     VGQWDLTVKLPPPSLAVRIHGGAPKLVGSWKASRSLDGWGIEDELRITDEAGNPMALS
                     RSVRVYDAAAKHWNLVAVDAYRARITTASADWTNGEMLTTSRGVDPDGKAYMLRTKFY
                     EITAAGFKFQQDRSTDDGKTWTEGTLRLEAKRVKPAP"
     gene            1286..>1682
                     /locus_tag="VLD58_04530"
     CDS             1286..>1682
                     /locus_tag="VLD58_04530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53594.1"
                     /translation="MPRTRAWIWPQLIIGWLPVWALYMTLILSAHPQTHTYSAAFSAF
                     QAILVAALLGLLVQRLVDRIPWPHPLRPGFMLLHLGAAAVYSALWILCTTLIQLSLHH
                     GAVLFVTILPVSYFILGVWFYVMVAGVSYA"
BASE COUNT          243 a          595 c          575 g          269 t
ORIGIN      
        1 gcgatggcga cccgctgttg ctggccgccg gagaggcggc ccggcagctt gtcggcctga
       61 tccgcgatgc cgagccgctc gaggaggccg agtgcccggg cccggcgctc ccgggccggc
      121 caggcgtcgc agaaatccat cgggagcatg acattctcga tcgcggtgag cgtcggcagg
      181 agttggaaga actggaagac gattccgacg gtgcggcccc gccaggcggc catccggcgc
      241 tccggcatcg catggaccgc ggtgcccccg accatgacct cgccgctcgt ggggcggtcg
      301 atgcccgcca ggagcccgag cagggtggac ttgcccgacc ccgactgtcc caccaccacc
      361 gcgaattccc cggaccggat ggccaggctc acgccggcca gggcggcgaa tcctccggcg
      421 gccccggggt aggtcttcga cacatctcgg agctcgatca ggggcgggcc cgcgtcggtc
      481 gcggaaaggc gagtcgtcat gttcgaagcc tacgagcctg gcacgccacc gggctaccgg
      541 ggtcggcgcc gttcggcggc tccacggtgc cgttgggcga ggaaggggtg gtcgctggcg
      601 cccgggggtg aaaacgtgca cccacgaact caggccccat cccgaactcc cggaggcacc
      661 atgcggttcc gttccatcgt cgccgccttc acccttgccg ttcccgcggg actcgcggcg
      721 cagcacggcg gggcgcccgc ccagcggctc aacaccgtgg ctccggccga ggcgaagcag
      781 ttcgacttcc tcgtcggcca gtgggatctg accgtcaagc tccccccgcc gagcctcgcg
      841 gtgcggatcc atggcggagc gccgaagctg gtcggcagtt ggaaggcctc gcgctcgctc
      901 gacggatggg gcatcgagga cgagctccgc atcaccgacg aggcggggaa tccgatggca
      961 ttgagccggt cggtgcgcgt gtacgacgcg gcggcaaaac actggaatct cgttgcggtg
     1021 gacgcctacc gggcccgcat caccaccgcc tcggccgact ggacgaacgg cgagatgctc
     1081 acgacctcgc gcggcgttga tccggacggc aaggcctaca tgctgcggac gaagttctac
     1141 gagatcaccg cggcgggctt caagttccag caggaccggt ccaccgacga cgggaagacc
     1201 tggacggagg gcacgctccg gctggaggcg aagcgggtga aaccggcccc ttgatctcgg
     1261 ccctgcgggg ctggatcgtt ccgcgatgcc tcgaacccgg gcctggatct ggccgcagct
     1321 gatcatcggg tggctgccgg tatgggcgct ctacatgacg ctcatcctgt ccgcgcaccc
     1381 gcagacgcac acctactcgg cggccttctc ggccttccag gccattctcg tcgccgcgct
     1441 gctcggcctc ctcgtccagc ggctcgtcga ccggattccg tggccgcacc cgctccgccc
     1501 cggattcatg ctgctgcatc tcggggcggc cgcggtgtat tcggccctgt ggatcctctg
     1561 cacgaccctc attcagctgt ccctgcatca cggagcggtc ctgttcgtca ccatcctccc
     1621 ggtgtcgtac ttcattctcg gggtctggtt ctacgtgatg gtggccggtg tctcctatgc
     1681 cg
//
LOCUS       DATIFF010000315         1733 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_810829, whole genome shotgun sequence.
ACCESSION   DATIFF010000315 DATIFF010000000
VERSION     DATIFF010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1733
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_810829"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..233)
                     /locus_tag="VLD58_04535"
     CDS             complement(<1..233)
                     /locus_tag="VLD58_04535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53595.1"
                     /translation="MSRPVPIPELASIDEVDRRFRAAGYIANRDLATAVFLSLTLGRP
                     LLLEGEAGVGKTEVARVLAQVLGTELIRLQCYEG"
     gene            complement(548..1564)
                     /locus_tag="VLD58_04540"
     CDS             complement(548..1564)
                     /locus_tag="VLD58_04540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53596.1"
                     /translation="MPGSILLSPARLEGRLLAKGTRIDAALAELLRAAAQAGTLNHTL
                     RLAWPDPGDLHEDDASMRLARAVAGHHVRVGTPKQSKVDLTAAVDGVLRIDIAALGRL
                     NRIDPLEVFTLFHGQAVRAGEVVASVKVAPHLVAESAVVAGERVAGEAAPLIDIAAYR
                     PLAVAALAAESLAPGGLERFEQAARTKVSSLGGKFLGVTQVGTEDPGEAASQLREALS
                     RTALTERVPLLLVGGVSAGDPLSPFYEALEGLGGRVLRRGVPAHPGSMIWLAALGDTV
                     ILGLPQCGMFSMATAADLVLPRLLTGEEITPDTLADLGHGGLLGKEMRFRFPDYAREL
                     QAPE"
BASE COUNT          271 a          625 c          579 g          258 t
ORIGIN      
        1 ccctcgtagc actggagccg gatgagttcg gtgccgagga cctgggccag tacccgggca
       61 acctcggtct tgcccacacc ggcttcgcct tcgagcaaca ggggccggcc cagggtgagc
      121 gagagaaaga cggcggtggc caggtcgcga ttggcgatgt agcccgccgc gcggaagcgg
      181 cggtccacct cgtcgatgct ggccagttcg gggatgggga cgggacggct catgacagga
      241 aggtgagcgc gggccgagcg gcccgctagg cctcggcgtc ccgagactcc gtcatcccga
      301 gcgcagcgag ggatctactc tgcggttcac gtggttgtgc cgtgcgtcgc gctcgggtcg
      361 aggggcactc tccgcgggcc tgaagttcgc tctcagggaa cgccctcata ggggatgggc
      421 tcacttacgc cccgctccgc gttcccctcg accctcgcac gcctttgcac gatctgccgc
      481 cttgccgcct tgccgccttg cgacaggcca atccgccggc gggatacttc atggcgtaac
      541 tccggtctca ttctggtgcc tgcaactccc gcgcgtagtc cggaaaccgg aagcgcattt
      601 ccttgccgag caacccgccg tgccccaggt cggcgagggt gtcgggggtg atctcttcgc
      661 cggtaaggag ccggggcagc accaggtcgg ccgccgttgc catgctgaac atgccgcact
      721 ggggaagacc caggatcacc gtgtcgccga gcgcggcaag ccagatcatg gagccaggat
      781 gcgccggaac tccccggcgg agcacccggc cgcccaggcc ctcgagcgct tcatagaaag
      841 gagaaagcgg atccccggca gagacgccgc cgaccagaag cagcgggact cgctcggtca
      901 gcgcggttcg ggagagcgcc tcccgcaatt gcgacgcggc ttcacccgga tcttcggtgc
      961 cgacttgagt cacgcccagg aatttccccc ccagggaact caccttggtc cgggccgcct
     1021 gctcgaagcg ctccagcccg cccggcgcca gcgactcggc cgccagcgcc gccaccgcga
     1081 gcggccgata cgccgcgatg tcgatgagcg gcgccgcctc gccggctacc cgctcgcccg
     1141 ccaccaccgc cgactccgct accaggtggg gcgccacctt cacgctcgcc accacctcgc
     1201 cggcgcgcac cgcctggccg tgaaagagcg tgaacacctc cagcggatcg atgcggttga
     1261 gccggcccag cgcggcaatg tcgatccgca gcaccccatc taccgcggcg gtgaggtcaa
     1321 ccttgctctg cttcggggtg cccaccctca catgatgacc ggccaccgcg cgagccagcc
     1381 gcatcgaggc gtcgtcctcg tgcaggtcgc cgggatcggg ccacgccagc cggagagtgt
     1441 ggttcagggt tcccgcctgg gccgctgcgc ggagcagctc ggccagcgcg gcgtcaatcc
     1501 gggtcccctt ggcaagcagg cggccctcga gccgcgccgg cgagaggaga atggatccgg
     1561 gcaatcgcaa gtagcctccg gccatgaggg ccggaggcgt cactcgttca catcgcatcc
     1621 gggaaaggtt cgtcccgggc gtggcaaaac tcaaggcgcc gctgtcaatt gccgctggcc
     1681 ggctcccggt acaggctctc gatcgcttcg ctgaaccgct tctcggccat gcg
//
LOCUS       DATIFF010000316         4651 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_349656, whole genome shotgun sequence.
ACCESSION   DATIFF010000316 DATIFF010000000
VERSION     DATIFF010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4651
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349656"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..347
                     /locus_tag="VLD58_04545"
     CDS             <1..347
                     /locus_tag="VLD58_04545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53597.1"
                     /translation="LGAEYARVSDSLSAGPPAGGTPSALTDGNIYAAYGVLNIPNSKV
                     SVIGRFDLQDPSTKTTNDHQTRVIGGVAYQVNPNLRVLADIDNLTLQSGAYTNAVQST
                     RTQGLLQMQVAF"
     gene            386..1441
                     /gene="pstS"
                     /locus_tag="VLD58_04550"
     CDS             386..1441
                     /gene="pstS"
                     /locus_tag="VLD58_04550"
                     /inference="COORDINATES: protein motif:HMM:NF008171.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HSB53598.1"
                     /translation="MIGKLLTRTPALVGAALLSAAPLAAQTALTGAGATFPNPIYSKW
                     FDAYNKKTGVQINYQSIGSGGGIKQYTEGTVDFGASDGPMTDEQLQAVGGHVIHIPTV
                     MGADVMTWNLPSLGEKQLRFDGPTIADIFLGKITKWNDKRLTTLNPGVALPNEDIIVV
                     HRSDGSGTTYIFTDYLSKVSPEWKDKVGKATSVNWPVGLGGKGNEGVTQQVKQTEGAL
                     GYVELIYAVANKLPYGLVQNAAGAFVNPSLESVSQAAASAKFAKNTDFRVSITNAPGQ
                     GAYPISSFTWLLIRPDMKDAAKAKAMKEFLEWMIGPEAQGMAPELQYAALPQEVTGLI
                     KERLQTLKAGGKTIAGM"
     gene            1598..2668
                     /gene="pstS"
                     /locus_tag="VLD58_04555"
     CDS             1598..2668
                     /gene="pstS"
                     /locus_tag="VLD58_04555"
                     /inference="COORDINATES: protein motif:HMM:TIGR00975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HSB53599.1"
                     /translation="MTRVPLVRGVTLVLFLPAACGGGDRPAPSGGAGRTAAGAALTGA
                     GATFPNPIYAKWFDLYAKQTGVRINYQSIGSGGGIRQFIEGTVDFGATDGPMSDEQIR
                     QAQDNVVHLPTVLGAVVLTYNLLSLKTTRLKLDAPTVAAIFLGRITKWSAPEIAALNP
                     GVALPDADLVVVHRSDGSGTTYIFTDYLAKVSPEWAQGPGRGTSVNWPAGLGGKGNEG
                     VTQQVKQTDGALGYVELVYATANSLPYAVLRNAAGRDVEPTLAAVTAAAGSAQLGPST
                     DFRVSVTNAPGADAYPIASFTWLLVHPRPPDPAKAKLLKGFLTWMLTPEAQQATTDLG
                     YAPLPAGVMEILRTRIAALPGP"
     gene            2727..3725
                     /gene="pstC"
                     /locus_tag="VLD58_04560"
     CDS             2727..3725
                     /gene="pstC"
                     /locus_tag="VLD58_04560"
                     /inference="COORDINATES: protein motif:HMM:TIGR02138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HSB53600.1"
                     /translation="MTTATSPANASSGAGNSKIPLSLRGAAYGDRVFNLVLICAATLI
                     PILLGFLVYELWTGSRLAVQKFGLDFVATSVWDPVAGQFGAFPLIFGTLLSSLIALAI
                     AVPLSLGVAIYLTEFAPRAVRQPVAFLIGLLAAIPSVVYGLWGIFVLIPVLRKTAFPF
                     LREVLGFLPIFQGPIYGPSMLAAGVILAIMVMPYVMSVSREVLLAVPNNQREAALALG
                     ATRWEAVITAVLPYARSGVVGAIILGLGRALGETMAVTMLIGNRHEIAASLFAPGYTM
                     AAAIANEFTEAATDLHFAALTYVAFVLFVLTVLVNAGARLLIWRVARGSSAGSKAL"
     gene            3722..4567
                     /gene="pstA"
                     /locus_tag="VLD58_04565"
     CDS             3722..4567
                     /gene="pstA"
                     /locus_tag="VLD58_04565"
                     /inference="COORDINATES: protein motif:HMM:TIGR00974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HSB53601.1"
                     /translation="MNRRTVRRLGSNVMVGLMMIAVVLAVLPLFFILLHLVVKGASSL
                     SWDFFTKMPVPAGETGGGVANAIVGTLIIVGTASLIGIPVGVGAGIYCAEYPSSRLTW
                     LSRFVADVLNGTPSIVVGVFAWTWIVARQKHFSALAGSVALALLMVPMVMRTTEEMIK
                     LVPNSLREAALALGYPRWRTSLSVVVRTTLPGIVTGTLLAVARIAGETAPLLFTALGS
                     QYLSFKINQPMAALPLTVFTYATGPYEEWHRFAWAAALVLILVVLLLGMGARLAIGRS
                     SVANG"
BASE COUNT          723 a         1633 c         1518 g          777 t
ORIGIN      
        1 cgctgggcgc cgagtacgcc cgggtgagcg attcgctgtc ggccggcccg ccggccggtg
       61 ggacgccctc cgcgctcacc gacggcaaca tctacgccgc gtacggcgtg ctgaacatcc
      121 ccaacagcaa ggtctccgtg atcggccgct tcgacctcca ggatccgagc acgaagacga
      181 ccaacgacca ccagacccgc gtcatcgggg gcgtggccta tcaggtcaac ccgaacctgc
      241 gggtgctggc cgacatcgac aatctgacgc tgcagtcggg cgcctacacc aacgccgtgc
      301 aatccacgcg aacccagggg ctgctgcaga tgcaggtcgc gttctgagcc ccgcacactc
      361 ttcattcgac acgaggagaa gcgcaatgat cggcaagctt ctgacccgga cccccgcgct
      421 cgtaggcgcc gccctgctct ccgcggcgcc gctcgccgcg cagacggcgc tcaccggcgc
      481 gggcgccacc ttcccgaacc cgatctattc gaagtggttc gacgcgtaca acaagaagac
      541 cggcgtgcag atcaactacc agtcgatcgg ctccggcggc ggcatcaagc agtacaccga
      601 gggcacggtg gactttgggg catcggacgg gcccatgacc gacgagcagc tccaggcggt
      661 cggcgggcac gtgattcaca tccccacggt gatgggggcg gacgtaatga cctggaacct
      721 gccgtcgttg ggcgagaaac agctccgctt cgacggcccc acgatcgccg acatcttcct
      781 cggcaagatc accaagtgga acgataagcg tctcacgact ctcaaccccg gggttgccct
      841 gcctaacgag gacatcatcg tcgtccaccg ctccgacggg tcgggcacga cctatatctt
      901 caccgactac ctgagcaagg tgtcacccga gtggaaggac aaggtcggca aggcaacgtc
      961 ggtgaactgg ccggtcgggc tgggcggcaa ggggaacgag ggcgtgaccc agcaggtcaa
     1021 gcagaccgag ggggcgctgg gctatgtcga gctcatctac gccgtggcaa acaagctgcc
     1081 ctacggcctg gtgcagaatg cggccggggc tttcgtgaac ccgtcgctgg aatcggtgag
     1141 ccaggccgcg gcgagcgcca agttcgccaa gaacaccgat ttccgcgtgt cgatcaccaa
     1201 cgcgccgggc cagggagcgt atccaatctc ctcgttcacc tggctcctga tccggccgga
     1261 catgaaggac gcagcgaagg cgaaggcgat gaaggaattc cttgagtgga tgattgggcc
     1321 ggaggcgcag gggatggcgc cggagctgca gtacgccgcc ctcccccagg aagtgaccgg
     1381 gctcatcaag gagcgcctcc agacgctcaa ggccggcggg aagacgatcg ccgggatgta
     1441 gggcagtacc ccgcaccatt tgcagtgccg gtccggccgt cagttcgctt ccctcaggat
     1501 gggccgggcc ggtactgcgc cctccacgac ttccgggcta gaattctcct gatccgggcc
     1561 gtcccgcagc atcgtccctc tcaggatcga gccttccatg acccgagtcc cgctcgtccg
     1621 cggcgtcacg ctcgtcctct tcctgccggc tgcttgcggc ggcggcgacc ggcccgcacc
     1681 gtcgggcggc gccggacgta ccgccgcagg cgccgccctc accggcgccg gggcgacgtt
     1741 tcccaacccg atttacgcga agtggttcga cctttacgcg aagcagaccg gggtccggat
     1801 caactaccag tcgatcgggt ctgggggcgg gatccggcag ttcatcgagg gtacggtgga
     1861 tttcggcgcg accgacggcc ccatgtcgga cgagcagatc cgacaggccc aggacaacgt
     1921 cgtccacctg cccaccgtgc tcggcgccgt cgtgctcacc tacaacttgc tgtcgctcaa
     1981 gaccacgcgg ctcaagctcg acgcgcccac ggtcgccgcc atttttctcg gtcgcatcac
     2041 caagtggagc gcgcccgaga tcgccgcgct caatcccggc gtcgccctgc ccgacgcgga
     2101 tctcgtggta gtgcaccgct ccgacggctc gggcactacc tacatcttca cggattacct
     2161 cgcgaaagtc tcgcccgaat gggcccaggg acccggccgc ggcacgtccg tgaactggcc
     2221 ggccggtctg ggcggcaaag gcaacgaggg cgtcacccaa caggtgaagc agaccgacgg
     2281 cgccctcggt tacgtggagc tcgtctacgc aacggccaac tcgctcccgt acgccgtgct
     2341 ccggaacgcg gccggccgag acgtcgagcc gaccctcgcc gccgtcaccg ccgccgccgg
     2401 gtcggcgcag ctgggcccca gcaccgattt cagggtatcg gtcaccaacg ccccgggcgc
     2461 ggacgcctat ccgatcgcgt cattcacctg gctgctggtt cacccgcgcc cccccgaccc
     2521 cgcgaaggcc aagctgctga agggattcct cacctggatg ctgaccccgg aggcgcagca
     2581 ggctaccacc gaccttggct acgccccctt gccggccggc gtgatggaga tcctgcgcac
     2641 caggatcgcc gcgctgcccg gaccgtgacg tgtccgttac aatctcgtga ccgttcgccg
     2701 gggcgcgccg ggtaagatcc ctcgcgatga ccaccgccac ctccccggct aacgcatcgt
     2761 ccggcgcggg caactcgaag attcccctct cccttcgagg cgcggcgtac ggggaccgcg
     2821 tcttcaatct ggttctgatc tgcgccgcca ccctgatccc cattctcctg gggttcctgg
     2881 tgtacgagct ctggaccggc tcgcggctcg cggtgcagaa gttcgggctg gatttcgtag
     2941 cgacgagcgt gtgggacccg gtcgccggac agttcggcgc gttcccgctc atcttcggca
     3001 cgttgctctc ctcgctcatc gccctggcga tcgcggtgcc gctctccctc ggtgtggcga
     3061 tctatctcac ggagttcgcg ccgcgcgcgg tccgccagcc ggtggcgttc ctgatcggcc
     3121 tcctcgcggc catcccgagc gtggtgtacg ggctgtgggg catcttcgtg ctgatcccgg
     3181 tgctccggaa gacggcgttt ccctttctcc gcgaggtcct cgggttcctg cccatcttcc
     3241 agggcccgat ctacggcccc tcgatgctcg ccgccggggt gattctcgcg atcatggtga
     3301 tgccgtacgt catgtcggtc tcccgcgagg tgctcctcgc ggtgcccaat aaccagcggg
     3361 aagccgccct cgcgctgggc gcaacccggt gggaagcggt gatcacggcc gtgctcccgt
     3421 acgcccggtc gggtgtcgtc ggcgcgatca tcctggggct cgggcgggcg ctgggcgaga
     3481 cgatggcggt cacgatgctg atcggcaacc ggcacgagat cgccgcgtcc ctcttcgcgc
     3541 ctgggtatac gatggcggcg gcgatcgcga acgagttcac ggaggctgca accgacctgc
     3601 acttcgccgc gctcacatac gttgccttcg tactgttcgt gctcaccgtg ctggtgaacg
     3661 cgggggcgcg gctgctcatc tggcgcgtgg cgcgtggctc cagcgccggg agcaaggccc
     3721 tgtgaaccgc cggacggtgc gccgtctcgg gagcaacgtc atggtcggcc tgatgatgat
     3781 cgccgtcgtg ctcgccgtcc tgccgctgtt cttcatcctg cttcacctcg tggtgaaggg
     3841 ggccagcagc ctctcctggg acttcttcac caagatgccg gtgccggccg gcgagaccgg
     3901 tggcggggtg gccaacgcca tcgtcggtac gctgatcatc gtgggcacgg cgagcctgat
     3961 cggcatcccg gtgggggtcg gcgccgggat ctactgcgcc gagtacccga gcagccggct
     4021 cacctggctc agccggttcg tggcggacgt gctgaacgga acgccgtcga tcgtggtcgg
     4081 cgtgttcgcc tggacctgga tcgtcgcccg gcagaagcac ttctcggcac tggcgggatc
     4141 ggtggcgctc gcgctgctca tggtcccgat ggtgatgcgc accaccgagg agatgatcaa
     4201 gcttgtcccc aactctctcc gggaggcggc gctcgccctg ggctatcccc gctggcggac
     4261 cagtctgtcg gtggtcgtgc ggaccacgct accgggcatc gtgaccggaa cgctgctcgc
     4321 cgtggcccgg atcgcgggcg agaccgcgcc ccttctcttc acggcgctgg gcagccaata
     4381 cctgagcttc aagatcaacc agccgatggc cgcgctgccg ctgaccgtct tcacgtacgc
     4441 caccggcccc tacgaagaat ggcaccgctt cgcgtgggcc gcggcgctgg tgctgatcct
     4501 cgtggtgctg ctgctgggca tgggcgcgcg cctcgcgatc ggccgcagct ccgtcgccaa
     4561 tggctgaggt cccggcgcgg gtcgagaccg acaagctcac cgccatgtac gggaagacca
     4621 cggcgctgag gaacgtgacg ctgtcgttcg c
//
LOCUS       DATIFF010000317         3933 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1888683, whole genome shotgun sequence.
ACCESSION   DATIFF010000317 DATIFF010000000
VERSION     DATIFF010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3933
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1888683"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..283)
                     /locus_tag="VLD58_04570"
     CDS             complement(<1..283)
                     /locus_tag="VLD58_04570"
                     /inference="COORDINATES: protein motif:HMM:NF013663.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HSB53602.1"
                     /translation="MKLGVVGNPRYPDLKAVLRELSRLCQSRGISVITEPSLAPLWDV
                     QLPLLDEVTPDALVTFGGDGTLLRGARLLRGREAPILGVNLGRVGFLTTT"
     gene            complement(280..2178)
                     /gene="dxs"
                     /locus_tag="VLD58_04575"
     CDS             complement(280..2178)
                     /gene="dxs"
                     /locus_tag="VLD58_04575"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: protein motif:HMM:NF003933.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HSB53603.1"
                     /translation="MTLLDSIKSPADLKRIPRDQLPQLAQEIRDRLIDACSQTGGHIG
                     ASLGVVELSIALLYEFDSPNDKVVWDVGHQAYAWKLLTGRNDRFLSLRQTGGISGFLK
                     RNESEHDHFGAGHAGTAMSAALGMATARDLKGQSGKVVAIVGDGALTCGLSYEGMNNA
                     GHSDRDIILIVNDNGMSISPNVGAIHKTLGGIVASPATNRLREHIKHWTFKLGKVFGP
                     EMVEFAKNLEESAKNLFSDGMFFEELGFRYFGPIDGHDLKKLIDTFHFVKPMNGPRVI
                     HVMTQKGKGYPLAEANQEKWHGLAAYDPETGEPRKKASGPPTWTQVFGDAITALAAEH
                     PELVTITAAMPSGTGTNIFQKKWPERFFDVGIAEGHAVTFAGGLATQGIRPIVAIYST
                     FLQRAYDNIIHDIAVQHLPVVFAMDRAGLVGEDGQTHMGLYDIAYLLAVPGMTVTAPK
                     DGNELIGLLRTGLAHHEGPFSVRYPRDKTPAEPRPVAEVPAVPYGSWEMLRQGKDLAI
                     LAVGTMVQPSLQAAEQLAPEGIDCAVVNCRFLKPMDSAMLEALAQQFRTLVTVEEGTI
                     VNGFGATLSEKLQTTHPEARVIALGIPDKLIEQAPRAEQLENFGLSAGGIARRLRALH
                     SEESVEAR"
     gene            complement(2191..3108)
                     /locus_tag="VLD58_04580"
     CDS             complement(2191..3108)
                     /locus_tag="VLD58_04580"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HSB53604.1"
                     /translation="MSKPATPAVDVPTLLSEARERVDALLAAWAERVQTIVPGRTGEA
                     LGYAMNTPGKRVRAALVIAAYRACGGLSPAIAAVATAVETVHTYSLVHDDLPCMDDDD
                     LRRGRPTIHRAYDVPTASRVGFLLVPVAALVLTQAARDLVLNPAVLGVMAQELFNAGG
                     IEGMVGGQWLDLEAERKTLDLDGLIAVHRGKTGALIRAACLLGGMAAEAPPHVIEALA
                     GYGQEVGLAFQIADDVLDATATSAQLGKTAGRDAALEKSTYVSVLGVERARAEAASLS
                     SHAIRSLERAGVPAESLGALAHYIVHRAS"
     gene            complement(3105..3344)
                     /gene="xseB"
                     /locus_tag="VLD58_04585"
     CDS             complement(3105..3344)
                     /gene="xseB"
                     /locus_tag="VLD58_04585"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR01280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HSB53605.1"
                     /translation="MTEPAPTLAEELRRLEEIVRRLEREDGDLDQALALFEEGVARLR
                     LARERLGAAELRVKKVLEDAEGTLRATDFEADKSP"
     gene            complement(3341..>3933)
                     /locus_tag="VLD58_04590"
     CDS             complement(3341..>3933)
                     /locus_tag="VLD58_04590"
                     /inference="COORDINATES: protein motif:HMM:NF014640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HSB53606.1"
                     /translation="GDLVKALDRVNRMPGVEVCILARGGGAKEDLAVFNNEAVCRALA
                     AVTVPTVSAVGHETDLSFTDLIADVRAATPSAAMELTLPDQVEFARQIAGCGIRLATA
                     LGRGTRLGRERLERSADRLQAALDQRLERRRRDLERLAAQLDALSPLKVLDRGYSVAR
                     GPNGEVLKQLSSFPPGRDFTLRVADGEVPARVRDAS"
BASE COUNT          610 a         1344 c         1345 g          634 t
ORIGIN      
        1 tggtggtggt gagaaaaccg acccggccga ggttcacacc gaggatcggc gcctcccggc
       61 cgcgcaggag gcgggccccg cgaagcaggg tgccgtcgcc gccgaaggtg accagggcat
      121 cgggagtcac ctcgtcgagc agcgggagtt gcacatccca caggggggcc aggctcggct
      181 cggtgatgac ggaaatgccg cggctctggc agagccggga caattcccgg agcaccgcct
      241 tcagatcagg atatctcggg tttccgacga ccccgagttt catcgggcct cgacgctctc
      301 ctcgctatgc agcgcgcgga gccggcgggc aatgcctccg gccgagaggc cgaaattctc
      361 gagctgctcg gcgcggggcg cctgctcgat caacttgtcg ggaatgccca gggcgatgac
      421 ccgcgcctcg gggtgggtgg tctggagctt ttcggaaagg gtggccccga agccgttcac
      481 gatggtgccc tcttccacgg tgaccagggt gcggaactgc tgggccaggg cctcgagcat
      541 cgccgagtcc atcggcttga ggaagcggca attcaccacg gcacagtcga tcccttcggg
      601 cgcgagctgc tcggccgcct ggagactggg ctgcaccatc gtcccgaccg cgaggatggc
      661 gaggtctttc ccctgccgga gcatttccca cgagccgtag ggaaccgccg gcacctcggc
      721 caccggccgc ggctcggccg gcgtcttgtc ccgcgggtaa cggaccgaga acggcccctc
      781 gtggtgcgcc aggccggtcc ggaggaggcc gatcaactcg ttgccatcct tgggcgccgt
      841 gacggtcatc cccggcaccg cgagcaggta ggcgatgtca tacaggccca tgtgggtctg
      901 gccgtcttca ccgaccaggc cggcgcggtc catggcgaac accacgggaa ggtgctgcac
      961 cgcgatgtcg tggatgatgt tgtcgtaggc gcgctggaga aacgtgctgt agatcgcgac
     1021 gatcggacgg atcccctggg tcgcgaggcc acccgcgaag gtgaccgcat ggccttcggc
     1081 gatgcccacg tcgaagaacc gctcgggcca cttcttctgg aagatgttgg tccccgtgcc
     1141 gctcggcatc gcggcggtga tcgtcaccag ctcgggatgc tcggcagcca gggcggtaat
     1201 cgcgtcgccg aacacctggg tccaggtggg cgggccgctc gccttcttgc ggggctcacc
     1261 ggtctccggg tcgtacgccg caagtccatg ccacttctcc tggttggcct cggccagcgg
     1321 gtagcccttc cccttctgcg tcatcacgtg gatgacccgg gggccgttca tcggcttcac
     1381 gaagtggaag gtgtcgatca gcttcttgag atcatgcccg tcgatcggcc cgaagtagcg
     1441 gaagcccagc tcctcgaaga acatcccgtc ggagaagagg ttcttggcgc tctcctcgag
     1501 gttcttggcg aactccacca tctccggacc gaacaccttg ccgagcttga aggtccagtg
     1561 cttgatatgc tcgcggagcc ggttggtggc ggggctcgcc acgatgccac ccagggtctt
     1621 gtggatcgcg cccacgttgg gcgaaatcga catcccgttg tcgttcacga tcaggatgat
     1681 gtcgcggtcg gaatggccgg cattgttcat cccctcgtag gacaggccgc aggtcagggc
     1741 cccgtcaccc acgatggcga cgaccttgcc actctgcccc ttgaggtcgc gggcggtggc
     1801 catgcccagc gcggccgaca tcgcggtgcc ggcgtggccg gcgccgaaat ggtcgtgctc
     1861 gctctcgttc cgcttgagga aaccggagat gccaccggtc tggcggagcg agaggaagcg
     1921 gtcgttgcgg ccggtgagga gcttccaggc ataagcctgg tggcccacgt cccagaccac
     1981 cttgtcgtta ggggagtcga actcgtacag gagcgcgatc gacagctcca ccacgcccag
     2041 gctcgcgccg atatggccgc cggtctggga acaggcatcg atgagccggt cgcgaatctc
     2101 ctgcgccagc tggggcagct ggtcgcgcgg aatgcgcttg agatcggcag gagacttgat
     2161 cgagtcgaga agcgtcatgg tccggtcccg ttacgaagcc cgatgaacaa tatagtgcgc
     2221 cagggccccc agtgattccg cgggaacccc cgcacgttca aggctccgga tcgcgtgcga
     2281 cgacagcgag gcggcttccg cccgggcgcg ttcgacgccg agcacactca cataggtcga
     2341 tttttccagg gcagcatcgc ggccggcagt cttgccaagt tgggcgctgg tggccgtggc
     2401 gtccagcacg tcgtccgcga tctggaatgc cagccccact tcctgcccgt accctgccag
     2461 cgcctcgatg acgtggggcg gcgcctccgc ggccatccca cccagcaggc aggccgcccg
     2521 gatcagggcg ccggtcttcc cgcggtgcac cgcaatgagc ccatcgagat cgagcgtctt
     2581 gcgttcggcc tcgagatcga gccactgccc gccgaccatt ccctcgatgc cgccggcatt
     2641 gaagagctcc tgcgccatga caccgagcac cgcggggttc agcaccaggt cgcgggccgc
     2701 ctgggtgagc accagcgccg ccaccggcac cagcaggaat cccacccggc tggcggtggg
     2761 gacgtcgtag gcacgatgaa tcgtcgggcg gccccggcgc aggtcgtcat catccatgca
     2821 gggcagatcg tcgtgcacca gcgaataggt gtggacggtc tcgaccgcgg tcgccaccgc
     2881 cgcgatggcg ggcgacaacc cgccgcaggc gcggtacgcc gcaatgacca gcgcagcccg
     2941 cacccgcttg ccgggcgtgt tcatcgcgta gcccagcgcc tcaccggtgc gccccggcac
     3001 gatggtctgc acccgctcgg cccaggcggc gagcagcgcg tccacccgct cccgcgcttc
     3061 ggacagcagg gtgggtacgt cgaccgcggg agtggctggt ttgctcacgg cgatttgtcg
     3121 gcctcgaaat cggtggcccg gagcgtccct tcggcgtcct ccagcacctt cttcacccga
     3181 agctccgcgg cgccgaggcg ttcgcgggcg agccggagcc gcgcgacccc ttcctcgaag
     3241 agggcgagcg cctggtcgag atcgccgtct tcccgctcca gccggcggac tatctcctcc
     3301 agccggcgga gttcttcggc gagtgtggga gcaggttcgg tcatgaggcg tctctgaccc
     3361 gggccggcac ctcgccatcg gctacccgaa gggtgaagtc gcgcccggga ggaaatgatg
     3421 agagctgttt gagtacctcg ccattgggcc cgcgggctac gctatagccc cggtccagca
     3481 ccttgagtgg cgagagggcg tccagctggg ccgcgagccg ctcgagatcg cggcgccgcc
     3541 gctcgagccg ctgatcgagc gcggcctgca accggtcggc gctccgctcc agccgctccc
     3601 gcccgagccg ggtcccgcgc cccagcgcgg tggcgagccg gatgccgcag cccgcgatct
     3661 gccgggcgaa ctcgacctgg tccggcaggg tgagttccat cgccgccgag ggagtcgcgg
     3721 cgcggacatc ggcgatgagg tcggtaaacg agagatcggt ctcgtgcccg accgccgaga
     3781 cggtcggcac cgtcacggcc gcgagcgcgc ggcagaccgc ttcattattg aaaacggcga
     3841 gatcttcctt ggcccccccg ccccgcgcga ggatgcagac ctcgaccccg ggcatgcggt
     3901 tcacccggtc aagggccttc accaggtcgc cct
//
LOCUS       DATIFF010000318         2570 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_42802, whole genome shotgun sequence.
ACCESSION   DATIFF010000318 DATIFF010000000
VERSION     DATIFF010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2570
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42802"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..671
                     /locus_tag="VLD58_04595"
     CDS             <1..671
                     /locus_tag="VLD58_04595"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HSB53607.1"
                     /translation="TGGTYLGIALSTAANAAILQAATPVLVALGARFYLKERLRRRQW
                     AGVAASLAGVLLVITRGSWRAIAHLELMPGDFILLFSQAGWSAYTIYGKQVLAVHSPA
                     VATTASYILGSAMLLPMMLVAAPFFPRPDLTSQTAWLVVLYQAFLGAVAHVWWYEGVK
                     TVGPSRAAIFMNLQPIVGVLLAWVILREAIEWPEVAGGALVLLGVALTTQAPPTPPAA
                     LGEP"
     gene            758..1837
                     /locus_tag="VLD58_04600"
     CDS             758..1837
                     /locus_tag="VLD58_04600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009797950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HSB53608.1"
                     /translation="MRGDDEQQASVWSYIPLEQRIPVDHPLRAMRAMVDEVLRELSPQ
                     FSRLYAKVGRPSIAPERLLRALLLQVLYSVRSERLLMEQLDYNLLFRWFVGLAADDPI
                     WDATVFTKNRQRLLEGDIARAFFDRVVAQARQRGLLSDEHFTDDGTLIEAWASLKSFK
                     PTGTPPTPPPDDPGNPTVNFHGERRSNATHASTTDPEARLFRKGDAHEAKLYYQGHVL
                     MENRHGLAVDGSLTAATGFAEREQALAMATRLPARATLGADKSYDTRDFVDGLRGLAV
                     TPHIAQNTTHRRSTLDRRTTRHPGYEASQQQRKRIEEIFGWLKTVGLLRKTRHRGVAR
                     VGWMFTFGLGVYNLVRLRRLVALPT"
     gene            complement(1965..2432)
                     /locus_tag="VLD58_04605"
     CDS             complement(1965..2432)
                     /locus_tag="VLD58_04605"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(2286..2288),aa:Sec)
                     /transl_table=11
                     /product="peroxiredoxin family protein"
                     /protein_id="HSB53609.1"
                     /translation="MSEGKAPGVGDPAPDFTLKTIGLKDVSLKTYRGKNVVLLFYPLD
                     WTPGUSTCMPAFDRRIRDFEAANTQVMGISTDSPFSHENWAKSVGISNYPLLSDVHRT
                     ASRAYGVYWPDWNANVRATFVIDRQGVIRFTERYGKGELPDPDKILAEVKKLG"
BASE COUNT          366 a          911 c          887 g          406 t
ORIGIN      
        1 ccaccggcgg cacctacctc ggcatcgcgc tcagcaccgc ggccaacgcg gccatcctcc
       61 aggccgcgac gccggtgctg gtggccctcg gcgcgcggtt ctacctgaag gagcgtctcc
      121 gccggcgcca gtgggcgggg gtggcggcct cgctggccgg ggtgctgctg gtcatcaccc
      181 gcgggagctg gcgggcgatc gcccacctcg agctcatgcc cggcgatttc atcctgctgt
      241 tctcgcaggc cggctggagc gcctacacca tctacggcaa gcaggtgctc gcggtgcact
      301 cgcccgcggt ggccaccacc gcgtcctaca tcctgggctc ggcgatgctg ctgccgatga
      361 tgctggtggc ggccccgttc ttcccccgcc ccgatctcac ctcgcagacc gcgtggctcg
      421 tcgtcctcta tcaggccttc ctgggggcgg tcgcccacgt gtggtggtac gagggggtga
      481 agacggtggg cccgagccgg gccgcgatct tcatgaacct gcagccgatc gtgggcgtgc
      541 tgctggcctg ggtgatcctc cgcgaggcca tcgaatggcc ggaggtggcc ggcggcgcgc
      601 tggtgctgct gggggtggcg ctcaccaccc aggccccgcc gacgccgccg gcggcactcg
      661 gcgagcccta gcaggctgcg gaaaaactcg acattcgatg ccgagtgcgc gtgagagttc
      721 ggctacgatg cgcgtaaccc ctcgcgagga ggcgcgcatg cgcggcgacg acgagcagca
      781 ggcctcggtg tggagctaca tccccctgga gcagcgcatc ccggtcgacc acccgctgcg
      841 ggccatgcgg gccatggtgg acgaggtgct gcgcgagctg tcgccgcagt ttagccggct
      901 gtatgcgaag gtcgggcgcc cgtcgatcgc gcccgagcgg ctgctccggg ccctgctgct
      961 gcaggtgctc tacagcgtgc ggagcgagcg gttgctgatg gagcagctcg actacaacct
     1021 gctcttccgc tggttcgtgg gcctggcggc cgacgatccg atctgggacg ccaccgtgtt
     1081 caccaagaac cgccagcgcc tgctcgaggg cgatatcgcc cgggccttct tcgaccgggt
     1141 cgtggcccag gcgcgccagc gcgggctgct ctcggacgag catttcacgg acgacggcac
     1201 gctcatcgag gcctgggcga gcctgaagag cttcaagccc acggggacgc cccccacgcc
     1261 gccgcccgat gatcccggca atccgaccgt gaacttccac ggcgagcgcc ggagcaacgc
     1321 gacccacgcc tccacgacgg atcccgaggc gcggctcttt cgcaagggcg acgcccacga
     1381 ggccaagctc tactaccagg ggcacgtgct gatggagaat cgtcatgggc tggctgtcga
     1441 cggcagcctg acggcggcca ccggcttcgc ggagcgggag caggccctgg cgatggccac
     1501 ccgactgccc gcccgcgcca cgctgggcgc cgacaagagc tatgacacgc gggacttcgt
     1561 cgacggcctc cgcgggctcg cggtgacccc gcacatcgcg caaaacacca cgcaccggcg
     1621 gagtacgctc gatcgccgca ccacgcggca ccccggctac gaagcgagcc agcagcagcg
     1681 caagcggatc gaggagatct ttggctggct caagacggtg ggcctgctgc gcaagacccg
     1741 ccatcgcggc gtggcccggg tcggctggat gtttaccttt gggctgggcg tctacaacct
     1801 ggtccggctg cggcggctcg tggcgctgcc aacatgacgg ctgcggatcg ctggccacgc
     1861 ctcagacccg ggggcccgcg ggcgagccaa gctcgcatgg cgcactaaac accgactcat
     1921 atcgagacgg atatggcctc ttcacgtcgt ttttccgtag cctgctagcc gagcttcttg
     1981 acctcggcga ggatcttgtc gggatcgggc agctcgccct tgccgtagcg ctccgtgaag
     2041 cggatcaccc cctgcctgtc gatcacgaag gtggcccgca cgttggcgtt ccagtccggc
     2101 cagtagacgc cgtaggcccg gctggccgtc cggtgaacgt cggagagcag cgggtagttg
     2161 gagatcccga ccgacttcgc ccagttctcg tggctgaacg ggctgtccgt gctgataccc
     2221 atgacctggg tattcgccgc ctcgaagtcg cggatgcgac gatcgaaggc gggcatgcag
     2281 gtggatcagc cgggcgtcca gtcgagcgga tagaagagca gcaccacgtt cttgccccgg
     2341 taggtcttga ggctcacgtc cttgagcccg atcgtcttca gcgtgaagtc cggggcggga
     2401 tcgcccaccc cgggtgcctt gccctcgctc ataccctcat ccctctctcg cccgcccgag
     2461 ccgcgggcgg aagttggttg tcgcgggcgc ggccgccgtg ccgggctctc cgcccgcgcc
     2521 ccgcgcccgc gacggtcgca ccggcatggg cggcttgcgc cggcccgtcc
//
LOCUS       DATIFF010000319         1231 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1580897, whole genome shotgun sequence.
ACCESSION   DATIFF010000319 DATIFF010000000
VERSION     DATIFF010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1231
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1580897"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..382)
                     /locus_tag="VLD58_04610"
     CDS             complement(<1..382)
                     /locus_tag="VLD58_04610"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015022.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0030259 - lipid glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB53610.1"
                     /translation="MRRLLIAGGGTGGHLMPALAIAQALRELDPGIEPVLVGARRGVE
                     AQVLPTRDFRYHLLPAEPLYRRQWWKNFRWPWLAVELLREVRRVYAEEQPVAVLGTGG
                     YAAGPVVYWGARAGLPTALQEQNAY"
     gene            complement(475..>1231)
                     /locus_tag="VLD58_04615"
     CDS             complement(475..>1231)
                     /locus_tag="VLD58_04615"
                     /inference="COORDINATES: protein motif:HMM:NF013279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HSB53611.1"
                     /translation="MLASKKGEQVREFKKGVLPFMVILGLVAALIGLEPNLSMATLVA
                     LLGGIVLFASGARIGHFLILAAVGVILVFHRIADAQYRLARVHTFLNPGQGNLEGGFQ
                     IHQSLVGIGSGRLLGVGFGQGQQKLGYLPYAYSDFLFSTIGEEWGFLGVCLIVALFAL
                     FCWLGFRIARTTPDPFGQYLAVGLTATVGLTAFMHMAVSLGLMPTTGLTLPFVSYGRS
                     SLVISLAGTGILISIGRLRWRPAAATLPVRSEK"
BASE COUNT          220 a          440 c          415 g          156 t
ORIGIN      
        1 gataggcgtt ctgctcctgc agcgcggtgg gcaggccggc ccgggcgccc caatagacca
       61 cgggcccggc cgcgtagccg ccggtcccca gcaccgcgac cggctgctcc tccgcataga
      121 cccgtcttac ctcgcggagc agctcgacgg ccagccacgg ccaccggaag ttcttccacc
      181 attggcggcg atacagcggc tcggcgggga gcagatggta gcggaagtcg cgggtgggaa
      241 gcacctgggc ctcgacgccg cgccgggccc cgaccagcac cggctcgatg cccgggtcca
      301 gctcgcggag cgcctgcgcg atggcgagcg ccggcatcaa gtggccgccg gtgccgccgc
      361 cggcgatgag caggcgtctc acccccactc cccaccgccc cgcccgtgag aagtgagaag
      421 tgaggaggga gaagggggca ggcgcaggcg cacggcctcc tcacttctca tctcttactt
      481 ctcacttctc actggcagcg tcgccgccgc cggccgccat cggagccgcc cgatgctgat
      541 caggatgccg gtgcctgcca gcgagatgac caggctcgag cggccgtacg atacgaaggg
      601 gagcgtgagc ccggtcgtgg gcatgaggcc gagggagacc gccatgtgca tgaacgcggt
      661 gagcccgacg gtcgcggtga gccccaccgc gagatactgg ccgaacggat cgggagtggt
      721 ccgggcgatc cggaagccca gccagcagaa gagggcgaag agcgccacga tgaggcagac
      781 gcccaggaag ccccattcct cgccgatcgt gctgaacagg aagtccgagt aggcgtacgg
      841 caggtagccg agcttctgct gcccctgccc gaaccccacc cccagcagcc gccccgatcc
      901 gattccgacc agcgactggt ggatctgaaa cccgccctcg agattgccct gccccgggtt
      961 caggaaggtg tgcacccggg cgagccggta ctgcgcgtcc gcgatccggt ggaacacgag
     1021 aatcacgccc accgcggcca gaatgaggaa gtggccgatc cgggcgccgg aggcgaacag
     1081 cacgatcccg ccgagcagtg cgaccagcgt cgccatggag agattcggct ccagtccgat
     1141 gagggcggcc accagcccca ggatcaccat gaacggcagc acccccttct tgaactcgcg
     1201 cacctgctcg cccttcttcg acgccagcat g
//
LOCUS       DATIFF010000320         4382 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1581214, whole genome shotgun sequence.
ACCESSION   DATIFF010000320 DATIFF010000000
VERSION     DATIFF010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4382
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1581214"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1242
                     /gene="yidC"
                     /locus_tag="VLD58_04620"
     CDS             <1..1242
                     /gene="yidC"
                     /locus_tag="VLD58_04620"
                     /inference="COORDINATES: protein motif:HMM:TIGR03593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0051205 - protein insertion into membrane
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HSB53612.1"
                     /translation="TVTARDSLVLTAQRGQVSVTLVYGFRPDDYQIDVTGQVNGLGPA
                     GGTLLIGMGHGMRQTEADTNANLYDYGVVTKTDESKLVKFSSLDPNEVRTINGPFEWA
                     AVKSKYFVTALLAIDTTAAKITGATVHARPGTGRVHQADVTFGVPVEAKGIFQYRIYA
                     GPMEYPRLRAIGHDFYDINPYGWPGFRTLIRPIAVGARWLLVWMHQHLNLAYGVVLVL
                     FGVMIRVLLWPLNQRGMRASMRMQAIQPEMQRLQEQHKGDPQKLQAEVMGLYKREGVN
                     PFSGCWPMLLPWPVLLALFFVLANTIELRGQSFLWLPDLSLKDPMFILPVLMGMSMFG
                     LNKIGMAGMPPNPQTKMMLYFLPIMMTVMFLNFASGLNLYYFVQNLASIPQQWLLAKE
                     RKRVQAQPVVGTKKVEAKAKK"
     gene            1382..4051
                     /locus_tag="VLD58_04625"
     CDS             1382..4051
                     /locus_tag="VLD58_04625"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HSB53613.1"
                     /translation="MRSAAPLSLLLVLLPATAAAQGDCWSTAPAPPGQDSVRVARAGG
                     LRSLRATPVHGAAPTVDGRLNESLWCEAAAATDFVQTRPAPGALGTLPTSARVLFDQQ
                     AIYIGVRLFDGQPERITGRYPRRDDEVVSDWVFVELDTRFDRRSGFSFGLNPRGVQVD
                     GSWWDDVTYDPAWNGVWQGAAAVDAKGWTAEFRIPFSQLALGRVTPGEPMTWGFNVYR
                     TSPHLGETSNWSPRLPSVTGVISHFNHLEGILAPGGTRMEVLPYATVVGVKTPDRAAD
                     GVSQRLGGDLRLRPTPSSSAVLSLHPDFGQVEADPSQVNLTTFETFLPEQRPLFMEGT
                     DIFQFPAGLSFASRGTSFADEAPFYSRRVGRTPRASLPAGLRAADIPLATTVLAAARL
                     SARTPAGWSGGLFHAWTSGDHGTVLDSTGRHDEQLEPLTSYSVGRVVRASADGHAAAG
                     LMLTAVNRLGLSARVDSQLTRNAYLVGSDVRWRRGAHGLSGFVLASRVAGSAPSIAAL
                     RSEARHGGVSGPADGRQVLTGASAQARFAKVDGALHWGVAARMVSRDFEANDAGFQRN
                     ADWLLLEGDWLYQRYRPGRWLRRWSVGSTGSGIGWTTGGLRRSSTANLSLGADLRSYW
                     GGTLTLGQEWSALDPEILRGGPALRMPARQSLSARLYSDTRKAWQAALGVNGEREQTS
                     GSWRVSLAPELSAFLTDRLQLGLTPAVGWAREGWQYVARSAPVGADPGAARYILGDLR
                     QREVSLTTRATYAFSSRLTLQWYVQAFLSGGAYAGFSDVHSPRATRPSARVAAIRPGR
                     LALDPERTYLLDGGSDSASTFADPAYSERSLHHSLVLRWEFLPGSALFVVWTHERGDE
                     RESPFLLGRDLRRLLEAPATNALQVKLSYWIAT"
     gene            4136..>4382
                     /locus_tag="VLD58_04630"
     CDS             4136..>4382
                     /locus_tag="VLD58_04630"
                     /inference="COORDINATES: protein motif:HMM:NF018984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABATE domain-containing protein"
                     /protein_id="HSB53614.1"
                     /translation="MTVGTLARVGGHEALDFANTAGWHAREERVEHLTSYGEWLAWLR
                     HGGDSQGQAASLVAAAAREHPARAARALGQIIEAREVI"
BASE COUNT          644 a         1460 c         1546 g          732 t
ORIGIN      
        1 acggtgaccg cgcgggacag cctggtgctc accgctcagc ggggccaggt gagtgtgacg
       61 ttggtctacg gcttccggcc ggatgactac cagatcgacg tgactggcca ggtgaatgga
      121 ctcggcccgg cgggcgggac gctgctgatc ggcatgggcc acggcatgcg ccagaccgag
      181 gccgatacca atgccaacct ctacgactac ggcgtggtca ccaagaccga cgagtcgaag
      241 ctggtgaagt tctcgagtct cgaccccaat gaagtgcgga ccatcaacgg tccgttcgaa
      301 tgggccgcgg tcaagtcgaa gtacttcgtc accgccctgc tggcgatcga caccacggcc
      361 gcgaagatca ccggggccac ggtgcatgcg cggcccggca ccggccgggt gcatcaggcc
      421 gatgtcacgt tcggggtgcc ggtggaggcc aagggcatct tccagtaccg gatctacgcc
      481 gggccgatgg agtatccccg gctccgcgcc atcgggcacg acttctacga catcaatccc
      541 tatggctggc cgggcttccg caccctgatc cgcccgatcg cggtgggcgc ccggtggctg
      601 ctggtatgga tgcaccagca cctcaacctg gcgtacgggg tggtgctggt gctgttcggc
      661 gtgatgatcc gggtgctgct gtggccgctc aaccagcggg gcatgcgggc cagcatgcgg
      721 atgcaggcca tccagccgga gatgcagcgg ctccaggagc agcacaaggg cgatccgcag
      781 aagctccagg ccgaggtgat gggcctctac aagcgcgagg gggtcaatcc cttcagcggc
      841 tgctggccga tgctcctgcc ctggccggtg ctgctggcgc tcttcttcgt gctggcgaac
      901 accatcgagc ttcggggcca gtcgttcctc tggctgcccg atctctcgct caaggacccc
      961 atgttcatcc tgccggtcct gatggggatg tcgatgttcg ggctcaacaa gatcggcatg
     1021 gcggggatgc cgcccaatcc ccagaccaag atgatgctgt acttcctgcc gatcatgatg
     1081 acggtgatgt tcctgaactt cgcttcgggg ctcaacctgt actacttcgt gcagaacctg
     1141 gcgagcattc cgcagcagtg gctgctggcc aaggagcgga agcgggtgca ggctcagccg
     1201 gtggtgggga cgaagaaggt ggaggcgaag gcgaagaagt aggccggagg ctggaggccg
     1261 gcggaggcag gagcggggag cccccttgaa gattgaaggg ggctcctttt ctgtgccgct
     1321 gcttgaccgc gcgcggcgga ggcgtaatga ttgaattgcc ttttactcat tacggcctcc
     1381 gatgcgctcc gcggctccgc tctccctcct gctggtcctg ctccccgcca ccgccgcggc
     1441 ccagggcgac tgctggtcca ctgcaccggc gccgcccggc caggacagcg tccgggtggc
     1501 ccgcgccggt ggactccgct ccctccgggc gacgccggtg cacggcgccg cgccgaccgt
     1561 cgatggaagg ctgaacgaat cgctctggtg cgaggcggcc gcggccaccg atttcgtgca
     1621 gacccggccg gcccctggcg ccctcggcac cctcccgacc agcgcccgag tgctcttcga
     1681 ccagcaggcg atctacatcg gggtgcggct cttcgatggg cagcccgaac ggatcaccgg
     1741 ccgctatccc cggcgggacg atgaggtggt ctccgactgg gtcttcgtcg agctggacac
     1801 ccgctttgac cggcggagcg ggttcagctt cggcctcaac ccgcggggag tacaggtcga
     1861 tggcagctgg tgggatgacg tgacctacga tccggcctgg aatggcgtat ggcagggtgc
     1921 cgccgcggtt gacgccaagg gatggacggc ggagttccgg attcccttct cgcagctggc
     1981 gctgggccgg gtgacgccgg gcgaaccgat gacctggggc ttcaacgtct accgtacctc
     2041 gccccacctg ggtgagacct ccaactggtc tccccggctc ccgtcggtca ccggcgtcat
     2101 ctcgcacttc aaccacctcg aggggattct cgcgcccggg ggcacgcgga tggaggtgct
     2161 gccctatgcc acggtggtcg gtgtgaagac gcccgatcgc gcggcggacg gggtcagcca
     2221 gcgcctcggc ggcgacctgc gactccggcc gaccccgtcg agctcggcgg tgctgagtct
     2281 ccaccccgat ttcggccagg tggaggccga tccatcgcaa gtgaacctca ccaccttcga
     2341 aaccttcctg ccggagcagc gcccgctctt catggaaggc acggacatct ttcagttccc
     2401 ggccggtctg agcttcgctt cccgaggtac gtcgttcgcc gacgaggcgc cgttctattc
     2461 gagacgggtg ggacggaccc cgcgggcgag cctcccggcg gggcttcggg ccgcagacat
     2521 tccgctggcc accaccgtgc tggcggccgc gcgtctgtcg gcgcgaaccc cggccggatg
     2581 gtcgggcggt ctctttcatg cctggaccag cggagaccac gggacggtgc tggattccac
     2641 cggccggcac gacgagcagc tcgagccgct caccagttac agcgtcgggc gggtggtgcg
     2701 cgcatctgcg gatgggcatg ccgctgccgg tctcatgctg accgcggtga accgcctggg
     2761 cctctccgcg cgggtcgaca gccagctcac gcggaacgcg tacctggtgg gcagcgacgt
     2821 ccgctggcgc cgtggggcgc atggcctgag cggatttgtg ctggcgagcc gggtggccgg
     2881 ctcggcaccg tctatcgcgg cactccgctc ggaggcgcgc catggcggag tgtcggggcc
     2941 tgccgatggc agacaggtgc tcaccggggc gtcggcccag gcgcggtttg ccaaggtcga
     3001 cggggcgctt cactggggcg tggcggcgcg catggtgagt cgagacttcg aagccaacga
     3061 cgctggattc cagcgcaacg cggattggct tctgctcgaa ggcgactggc tctatcagcg
     3121 ctaccgtccc ggtcgctggc tgcgccgctg gtcggtcggc tcgaccggca gcggcatcgg
     3181 gtggaccacg ggcgggctgc gccgatcctc caccgcgaac ctcagcctcg gtgcagacct
     3241 gcggagctac tggggcggaa ccctgacgct ggggcaggaa tggtccgccc tggatccgga
     3301 gatcctgcgc ggcggtccgg ccctccggat gccggcgcgg caatcgctca gcgcccggct
     3361 ctactccgat acccggaagg cctggcaggc tgctctcggg gtgaacggtg aacgggagca
     3421 gacctccggg tcctggcgcg tctcgctcgc tcccgaactc agcgcgttcc tgaccgaccg
     3481 gctgcaactg ggactgaccc cagctgtcgg gtgggccaga gagggatggc agtacgtggc
     3541 ccggagtgct cccgttggtg ccgacccggg ggcggcgcgg tacatcctcg gcgatctccg
     3601 ccagcgcgag gtttccctga cgacccgggc gacctatgcg ttctcgtcgc gcctcacgct
     3661 tcaatggtac gtccaggcgt ttctgagcgg cggtgcatat gccggcttct cggatgtcca
     3721 ctcgccccgg gccacgcgcc cctcggcccg ggtcgcggcc atccggccag gccggctggc
     3781 gctggacccg gagcgcacct atctgctgga tggtggtagc gacagcgcgt cgaccttcgc
     3841 cgacccggcc tattcggagc ggagcctgca tcacagcctg gtgctccgct gggagttcct
     3901 ccccggctcg gccctgttcg tggtctggac ccacgagcga ggcgatgagc gtgagagccc
     3961 cttcctcctg gggcgggatc tccggcgcct gctcgaggcc cctgcgacca atgcgctgca
     4021 ggtcaaactc agctactgga tcgccacctg aggtctcgcg gtgacttgcc cgcggttcgg
     4081 cactaccttc gaggcggctc ggtaaggatc ggcgtcgaag ggagatcact gggagatgac
     4141 tgtggggacg ctggcaagag tcgggggcca cgaggcgctc gatttcgcca acaccgccgg
     4201 atggcatgcg agagaggagc gcgtggaaca cctgaccagc tatggcgaat ggctggcctg
     4261 gttgcgtcac ggcggcgact cgcaggggca ggccgcgtcc ctggtggcgg ccgccgcacg
     4321 agaacaccct gcccgcgcgg cccgggcact gggccagatc atcgaggcgc gggaggtgat
     4381 ct
//
LOCUS       DATIFF010000321         4308 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1428028, whole genome shotgun sequence.
ACCESSION   DATIFF010000321 DATIFF010000000
VERSION     DATIFF010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4308
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1428028"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..1443)
                     /locus_tag="VLD58_04635"
     CDS             complement(67..1443)
                     /locus_tag="VLD58_04635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HSB53615.1"
                     /translation="MTARTVRVAAGQGFWGDWLEAPVRQVQGGPIDYLMMDYLAEVTM
                     SIMQKQKSRDPKMGYARDFVPLMERILPDIAARGIRVTSNAGGVNPRACAEAVREVAR
                     KLGLSRKVRIALVTGDDILPRLDELLAKGHQLTDMDTGRPLSTIRDKVLSANAYLGMG
                     PIVEALEGGAHVVITGRVTDTGLTLGPLFHEFGWGRDDWDKVAAGTVAGHIIECGAQA
                     SGGNLLRDWRKVKGMANPGFPIVEASADGTFVVTKHPGTGGVVSVPSVTEQLVYEMGD
                     PHTYITPDGIADFTTIQLKQAGKDRVRVSGIKGRERTDKLKVSIAYFYGYKAVGTLVY
                     SWPEAYDKAKAADRILRQRLEDLGLEYQQVLTEFVGVDSTHGSLSGPPDPEAPEVQLR
                     IGVRSKDKAAVERFTREIAPLVLTGPPSVTGFAGGRPEVQEVVAYWPALIDRTVVEPH
                     VHVEVLDA"
     gene            complement(1440..4277)
                     /locus_tag="VLD58_04640"
     CDS             complement(1440..4277)
                     /locus_tag="VLD58_04640"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HSB53616.1"
                     /translation="MTDPTPEPRIRSHLCYLWYAFAALTLTACGASAPVTRPAPAPAQ
                     PPAAPADANGPGQRVLAPAEAYARGWMPLKSTGVDRFLQAHPEWDGRGVLIGILDSGL
                     DPSVPGLTTTSTGQRKVLDLRDFSGEGSVPLTRVAPNGDQLVVSGRTYAGAGRLRALA
                     LKGEMWAGTIAEIPLGPPPASDLNGDNDDADTLAVVVARASDGWVLFADTDGDGSFAN
                     EKPVHDYLVAREYFGWHGKGRAAPVGIAANFSEDKGAPRLDLFFDTSAHGSHVSGIAA
                     ANDIYGVKGFDGVAPGANLIGLKIANNAQGGISTTGSMISAIDYAIRFAADRRLPLVL
                     NMSFGVGNEAEGAARMDQLIDSVLAAHPEVVFAISAGNDGPGLSTMGFPGSASRALTV
                     GATFPGVFLGASGKGGDPIAYFSSRGGELAKPDIVTPGMAYSTVPNWSLGNEQKGGTS
                     MASPHAAGLAALLVSALVQERRPVDARQIRQALMVTARPVGSETYLDDGTGLADVDAA
                     WRWLDANRQVPDVAVRATANGKTAAYRGRGFANPADTLQTFEVTLPGGAPEAAYTLRS
                     SAPWLHAPGNVRLRGGANSVALSYQARLLSRPGVYTGVVTGWTADTLLGPVFRLVNTV
                     VVPQPGTDLSADLGSMKAGQEGRVFFEARAGRPFNVTYSAARPGEQVLAYLHEPGGQP
                     YREDNGFGAGSGDQAAVISVDGRDVVPGFYEAIAVAPPLDGASATVEVSQSPFQIDAA
                     RTRDGVAVDLVNLTGTRADVQPFVVLVGAERTVRVVTSGSNPERIRFALPSWAVHAVV
                     DVSMDREQWPRFTDFGLTVFDRGGRQLGQSPLNYAFGRVHIELSPDSTRREAQVGLFP
                     GFADPTADQRWTALVSIRLYADSARVSQLPGPRVTANAGQKVTATVPWHDPGLPMGDG
                     FFPLGIVVVPDGERAWTREAGLPSPVTPISQ"
BASE COUNT          680 a         1496 c         1489 g          643 t
ORIGIN      
        1 aggccgacgt tggcggtgtc ccccttgtcg ccgctccgcg cgtgggccag ccagcgcagc
       61 tggatatcag gcatcgagca cctccacgtg cacgtgcggc tccaccacgg tccggtcgat
      121 gagggcgggc cagtaggcca cgacctcctg cacctcgggc cggccgccgg caaacccggt
      181 cacactcggc gggccagtca gcaccagcgg agcgatctcg cgggtgaacc gttcgaccgc
      241 cgccttgtcc ttcgaccgga cgccgatgcg caactgaacc tccggcgcct cggggtcggg
      301 cgggccggac agcgagccgt gggtcgaatc cactcccacg aactcggtga ggacctgctg
      361 gtactcgaga ccgagatcct cgagccgctg gcgcagaatc cggtccgccg ccttggcctt
      421 gtcgtacgcc tcgggccagg agtagaccag ggtccccacc gccttgtagc cgtagaagta
      481 ggcgatcgac accttgagct tgtcggtgcg ctcgcgaccc ttgatgccgc tcacccgcac
      541 ccggtcctta cccgcctgtt tgagctggat cgtggtgaaa tcggcgatcc cgtccggggt
      601 gatgtaggta tgcgggtcgc ccatttcgta gaccagctgc tccgtcaccg agggcacgct
      661 cacgacgcct ccggtcccgg ggtgcttggt caccacgaag gtgccgtcgg cgctggcttc
      721 cacgatcggg aagccgggat tggccatgcc cttcacctta cgccagtcgc gcaggaggtt
      781 gccgcccgag gcctgggcgc cgcactcgat gatgtgcccg gcgaccgtgc ccgcggcgac
      841 cttgtcccag tcgtccctcc cccagccgaa ctcatggaag agcggaccga gagtcagtcc
      901 ggtgtcggtg acccgcccgg tgatgaccac gtgggcgccg ccctcgaggg cctcgacaat
      961 cggccccata ccgagatagg cattggccga gagcaccttg tcgcggatgg tcgaaagcgg
     1021 ccggccggtg tccatgtcgg tgagctggtg ccccttcgcc agcagctcat cgagccgcgg
     1081 gagaatgtcg tcccccgtca ccagcgcgat gcgcaccttc cgggagagcc cgagcttccg
     1141 ggccacctcg cgcaccgcct cggcgcaggc ccgcggattc accccgccgg cgttgctggt
     1201 cacccgtatg cccctggcgg cgatatccgg gaggatccgc tccatcaggg gaacgaagtc
     1261 gcgggcatac cccatcttcg ggtcacgcga cttctgcttc tgcatgatcg acatcgtcac
     1321 ttcggccaga tagtccatca tcaggtagtc gatgggacca ccctggacct ggcgcaccgg
     1381 cgcctcgagc cagtcgcccc agaagccctg gccggcggcc acccgaaccg ttcgcgctgt
     1441 cattggctga tcggagtcac gggagaagga agtcctgctt cgcgggtcca cgcccgctca
     1501 ccgtccggca ccaccacgat gccgagcggg aagaagccat cgcccatcgg gagaccgggg
     1561 tcgtgccagg gcacggtcgc ggtcaccttc tggccggcat tggcggtcac ccgggggccg
     1621 gggagctggc tcacccgggc cgaatcggca tagagccgga tcgacaccag cgcggtccag
     1681 cgctggtccg cggtgggatc ggcgaatccc ggaaagagcc cgacttgagc ttcgcgccgg
     1741 gtggagtcgg gcgagagctc gatgtgcacc cgtccgaagg cgtagttgag cggcgactgg
     1801 cccagttgcc gtccgccgcg gtcgaagacg gtcaggccga agtcggtgaa gcgaggccac
     1861 tgctcccggt ccatgctgac gtcgactacc gcgtgcacgg cccaggacgg gagcgcgaag
     1921 cggatgcgtt cgggattcga cccgctggtg accacccgga cggtccgttc ggcgcccacc
     1981 agcaccacga agggctgcac gtcggcccgg gtgcccgtca ggttcacgag gtccaccgcc
     2041 acgccgtcgc gggtgcgcgc ggcgtcgatc tggaaggggc tctggctcac ctcgacggtg
     2101 gcgctggccc cgtcgagcgg cggcgcgacg gcaatcgctt cgtagaaccc cggcaccacg
     2161 tcgcgcccgt cgaccgagat gaccgcggcc tgatcgcccg acccggcgcc gaacccattg
     2221 tcttcgcgat agggctggcc gcccggctcg tggagatacg ccagcacctg ttcgccgggg
     2281 cgcgcggcgg agtaggtcac gttgaagggg cgaccggccc gggcctcgaa gaagacccgc
     2341 ccttcctgcc ccgccttcat cgagccgaga tcggcggaga gatcggtacc gggctggggc
     2401 accacgaccg tgttgaccag gcggaagacc gggcccagga gcgtgtcggc agtccagccc
     2461 gtcaccaccc cggtgtacac acctggacgc gacaggaggc gcgcctgata gctcagcgcc
     2521 acgctgttgg cgccaccccg gagccggacg ttccccggtg cgtggagcca gggagcgctg
     2581 gagcgcagcg tgtaggccgc ctccggagcg ccgcccggca gggtcacctc gaacgtctgg
     2641 agagtgtctg ccgggttggc gaaaccccgg ccgcggtagg ccgccgtctt tccgttcgcg
     2701 gtcgcgcgga ccgcgacatc gggcacctgc cggttggcat cgagccagcg ccacgccgcg
     2761 tcgacatcgg cgagcccggt accgtcatcg agataggtct cggaccccac cggacgcgcg
     2821 gtcaccatca gcgcctgccg gatctgccgg gcatcgaccg ggcgcctctc ctgcaccaga
     2881 gccgagacga gcagcgccgc cagtccggcc gcgtggggcg acgccatgct ggtgccgccc
     2941 ttctgctcgt tccccagact ccagttcggc acggtggagt aagccatgcc cggcgtgacg
     3001 atatccggct tggcgagttc gccaccgcgc gagctgaagt aggcgatggg atcgccgcct
     3061 ttccccgagg cgccgaggaa gacgccgggg aaggtcgcgc ccaccgtgag agcacgggag
     3121 gcggacccgg gaaagcccat ggtggacagg ccgggaccgt cgttgcccgc gctgatggcg
     3181 aagaccacct cgggatgggc cgcgagcacc gaatcaatca gctggtccat ccgggccgcg
     3241 ccttccgcct cgttgccgac gccaaagctc atgttgagca ccagcgggag ccgccggtcg
     3301 gccgcgaaac ggatggcgta gtcgatcgcc gaaatcatgc tgccggtggt cgagatcccg
     3361 ccctgggcgt tgttggcaat cttgaggccg atgaggttgg cgccgggcgc gaccccgtcg
     3421 aagcccttca cgccatagat gtcgttcgcg gccgcgattc cggagacgtg cgagccatgg
     3481 gcgctggtgt cgaagaagag atcgagccga ggcgcgccct tgtcctcgct gaaattggct
     3541 gcgatgccga ctggggccgc gcgccctttt ccgtgccagc cgaagtactc ccgcgccacg
     3601 aggtagtcgt gcaccggctt ctcgttggcg aaactcccgt caccatcggt atcggcaaag
     3661 aggacccagc catcgctggc cctggccacc acgacggcca gggtgtcggc atcgtcgttg
     3721 tcgccattga gatcactggc aggcggcggg ccgagaggga tctcggcgat ggtgccggcc
     3781 cacatctcgc ccttgagcgc cagggcccga agccggcccg cgccggcata ggtccggccg
     3841 ctgacaacca gctgatcgcc attcggggcg acccgggtga gcggcaccga cccctcgccc
     3901 gagaagtcgc gcagatcgag gactttgcgt tggccggtcg aggtggtggt gagcccggga
     3961 acagagggat cgagtccgct gtcgaggatg ccgatcagga ctccgcgccc gtcccactcg
     4021 gggtgagcct ggagaaagcg gtcgacccca gtcgacttga gtggcatcca cccgcgagca
     4081 taggcctcgg cgggcgcgag cacgcgctgg cccgggccat tggcgtcggc cggagcggca
     4141 ggcggctggg caggggccgg cgccggcctc gtgaccggcg cagatgcacc gcatgctgtg
     4201 agcgtcagcg ccgcgaaggc ataccacaga tagcacagat gggaacggat acgcggctcc
     4261 ggcgtcgggt cagtcatcgc tgaaaacaga aagctatcgg tgtacatc
//
LOCUS       DATIFF010000322         9172 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1121332, whole genome shotgun sequence.
ACCESSION   DATIFF010000322 DATIFF010000000
VERSION     DATIFF010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9172
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1121332"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..527
                     /locus_tag="VLD58_04645"
     CDS             <1..527
                     /locus_tag="VLD58_04645"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB53617.1"
                     /translation="RASEVITRLRELFAKKDVSAEPMDLNEATREVIALSMSELQRHG
                     AVLRQELADDLPAVTGDRVQLQQVILNLLLNAADAMGEVNDRPRHVVIRTETEGAGTV
                     RLSVRDVGVGLDPADLERVFDAFYTTKSTGMGIGLAISRSIMERHHGRLWAAHNEGPG
                     ATFAFSLPCAPRSQ"
     gene            524..898
                     /locus_tag="VLD58_04650"
     CDS             524..898
                     /locus_tag="VLD58_04650"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB53618.1"
                     /translation="MNEERPLVAVIDDDESVRESLPDLLRELGFAVEAYSSAEAFLSA
                     GNLARTRCLVLDLAMPGMSGPDLQEELQRRGRAIPIVFITAHAGEAARARLIEKGAAE
                     CLFKPFSEGALLAALKTALRVA"
     gene            979..1608
                     /locus_tag="VLD58_04655"
     CDS             979..1608
                     /locus_tag="VLD58_04655"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB53619.1"
                     /translation="MPQATPVVFVVDDDVSVRESLELLIQSEGWQPETFSTSREFLAR
                     PRSMVPSCLVLDVGLPDLNGLDLQQRIVDRADMPIIFITGHGDVPTTVRAMKAGAVEF
                     LTKPFDDEVLLQAVRQAIARSEAALGQETRLRELRERYASLSQREQEVMGLVVSGRLN
                     KQIGAALGISEITVKAHRGKVMRKMKADSLADLVKMSASLGLRSGGRGG"
     gene            complement(1588..2136)
                     /locus_tag="VLD58_04660"
     CDS             complement(1588..2136)
                     /locus_tag="VLD58_04660"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HSB53620.1"
                     /translation="MSHLTLPVSDRDHIQGNPKAALTLVEYGDYECPYCGMAYPIVKR
                     VQERLGKKLRFVFRNFPLNEIHPHALHAAEAAEAVAQHGGEEAFWVMHDLIYEHQRDL
                     SDAALARMARQAGVDAELVRGEVEEEQLKTRVRDDFMSGVKSGVNGTPTFFINGKRHD
                     GPWDEVSLVMALEATASAAASA"
     gene            complement(2133..2627)
                     /locus_tag="VLD58_04665"
     CDS             complement(2133..2627)
                     /locus_tag="VLD58_04665"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HSB53621.1"
                     /translation="MHHALPPGTEAPEFTLHATPDQRVSLSEFRGNPVILVFYPADFS
                     PVCGDQMALYNELASEFHRYHAELLGISVDGAWCHAAFKETRHLHMTLLSDFEPKGEV
                     ARRYGVYRSEDGTSERALFVIDSDGIIRWSYVSPVGVNPGADGILEALEQLPQAPAAM
                     RGAS"
     gene            complement(2737..3846)
                     /locus_tag="VLD58_04670"
     CDS             complement(2737..3846)
                     /locus_tag="VLD58_04670"
                     /inference="COORDINATES: protein motif:HMM:NF000689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HSB53622.1"
                     /translation="MSIHGASSARWPLFEDRARSYDAVLVVSYGGPEGPDDVLPFLEN
                     ATRGRGVPRERLLEVAEHYLHFGGVSPINAQNRDLVSALRRELAGHGIALPVYLGNRN
                     WHPFLDETLRRMRDDGITRAIALVTSAFSSYSGCRQYREDVARALEAVGSGAPEVDKL
                     RVFFNHPGFVEANAGHLSAALATLPSERRAGARVVFTAHSIPISMARSSAYEAQLREA
                     GRLIAEAAGIRSWDLAYQSRSGPPQVPWLEPDIRDHLRTLAGRGVREVVVLPLGFLSD
                     HMEVRYDLDTEAMQLATELGVTLVRAPTVGTAPAYIRALRELIQERMTERPQRRALGS
                     LGPSHDICPLDCCPSPPSRPPAAAGSVSGGRPSPA"
     gene            complement(3843..5144)
                     /gene="hemL"
                     /locus_tag="VLD58_04675"
     CDS             complement(3843..5144)
                     /gene="hemL"
                     /locus_tag="VLD58_04675"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: protein motif:HMM:NF000818.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HSB53623.1"
                     /translation="MRRIERSAALFAEAKHLLPGGVDSPVRAFRAVGGDPLFIARGEG
                     AWLEDVDGSRFVDYMMSWGPLILGHAHPAVTAALADAITRGTSFGAPTPLELDLARLV
                     RRFFPAIEMLRFVNSGTEATMSALRLARAFTGRSRILKFSGCYHGHADMLLVQAGSGV
                     ATLGLADSPGVPPGTVADTLVAPYNHLGTLEEIFRRYPGEIAAVIVEPVAGNMGLVPP
                     ADGFLEGLRQLTRSHGSLLIFDEVMCGFRVHPGGAQELYGVTPDLTTLGKVIGGGLPV
                     GAYGGRREIMEMIAPSGPVYQAGTLAGNPLAMAAGIATLTELARPGVWDRIAAATADL
                     GQRIERSAAKAGIPVRVQRMGTMLTPFFSERPVHDWESARRADTARFGRVFRRLLDQG
                     VYWVPSQFESAFLSAAHGEAELALTGAAFDAALMAEGRKAA"
     gene            complement(5141..6541)
                     /gene="hemG"
                     /locus_tag="VLD58_04680"
     CDS             complement(5141..6541)
                     /gene="hemG"
                     /locus_tag="VLD58_04680"
                     /EC_number="1.3.3.4"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004729 - oxygen-dependent
                     protoporphyrinogen oxidase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase"
                     /protein_id="HSB53624.1"
                     /translation="MRAAVVVIGGGITGLAAAMRLAERIDPAGIVLLEAQEQLGGKIR
                     TERTGDFVLEGGPDCFLATRPAGVELCRRLGIADQLVGTNPTLRQSFVKRAGRLHPLP
                     EGISGLVPSRLMPLLTTGILSPAGRLRAGLELLVPAARGAGDESVAQFARRRFGAEAY
                     DWLIEPLLSGIYAGDGDRLSLMATFPQMRETELRHGSLLKPMLTARFRDRGTTGGRAG
                     FVTLPGGLGDLVAALATRLTRVQILTGAPVRSVREGEIGREYRVELSDGRIIDSDAVV
                     LTAPAPASAALLESMDRELSALLRQIAVVSTATVSLAFPRSAVPAPLAGYGYVSPRVE
                     GGPLVACSWTSNKFAGRAPADTVLLRCFLGRAGHDEIVTAGNDILLGVARDELRRVHG
                     INAAPLLSRVVRWPGGMPQYTLGHADRLARIGSRLTGHPGLRLAGASYRGVGIPDCIA
                     SGWAAADSLAVPVEAA"
     gene            complement(6526..7596)
                     /gene="hemE"
                     /locus_tag="VLD58_04685"
     CDS             complement(6526..7596)
                     /gene="hemE"
                     /locus_tag="VLD58_04685"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: protein motif:HMM:NF013381.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HSB53625.1"
                     /translation="MAVTGLETEVPFLAAAGGRATPVTPVWFMRQAGRYMEEYRAIRA
                     HHTLLQICARPDLAAEVTLQPVRKLGVDAAILFADILLPLVPMGLELDFVSGEGPRIA
                     NPIRLASQVDALRPVDPAADLGPVLETIRLLRRQLEPRTPLIGFVGGPFTVATYAIEG
                     GPSRHLLESKRMMYQAPELWHRLLSALARVLADFLVAQADAGAQALQVFDSWAGQLSE
                     TDYRQYVLPHSRALFDRLATTGVPRIHFGVGTDHLLEAMTEAGGDVIGLDWRTPLDRG
                     WTRVGQRAIQGNLDPVALFAPLPELRRRVFDVLERAGGRPGHIFNLGHGILPDTPVDR
                     VRAVVDMVHQYHAEGENRCERR"
     gene            complement(7587..8276)
                     /locus_tag="VLD58_04690"
     CDS             complement(7587..8276)
                     /locus_tag="VLD58_04690"
                     /inference="COORDINATES: protein motif:HMM:NF018484.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chlorite dismutase family protein"
                     /protein_id="HSB53626.1"
                     /translation="MAEPTPETLNHFAMLSFTDSYWQLSPESRRATRDGLLSRLRATA
                     DAVHLYQLSALESQGDLLVWSATASASPGASARFFAGWAAAIAPARAHIRPSDVLWGY
                     TRPSQYTKTRSTQELDAFAPSRQQYLIVYPFVKTAEWYQLDREKRQNLMAGHIRIGTQ
                     YKDITQLLLYSFGLQDQEFVVVYETEDMLRFLALVQELRGAEARVYTARDWPLHVGIY
                     QPGAEALASWL"
     gene            complement(8292..>9172)
                     /gene="hemB"
                     /locus_tag="VLD58_04695"
     CDS             complement(8292..>9172)
                     /gene="hemB"
                     /locus_tag="VLD58_04695"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HSB53627.1"
                     /translation="QPIASMPGVQQWPVDRIGEEARALAALGIGSILLFGIPAAKDPE
                     GSGAWPADGVVQRAVRAIKQAVPGMVVVTDVCLCEYTDHGHCGLINGLAGPSDPHLPH
                     GYVLNDRTLDLLGRIALSHAEAGADVVAPSGMLDGMVSAIRIALDTGGFETLPILSYS
                     VKYASGFYGPFREAAEGAPRFGDRSSHQMDPGNLREAMREHALDAAEGADGLMVKPAL
                     AYLDVIRATRDRFPDLPLAAYNVSGEYAMVKAAAASGWIDERRVALEILTGIRRAGAD
                     LIITYHARDAATWLAG"
BASE COUNT         1473 a         3096 c         3221 g         1382 t
ORIGIN      
        1 atcgcgcctc cgaagtcatc actcgcctgc gcgagctctt cgccaagaag gacgtcagcg
       61 ccgagccgat ggacctgaac gaggccaccc gggaagtgat cgcgctgtcg atgagtgagc
      121 tccagcggca cggagcagtc ctgcggcagg agctggcgga cgaccttcct gcagtcacgg
      181 gcgaccgggt gcagctgcag caggtcatcc tcaatctcct gctcaacgcg gccgacgcga
      241 tgggcgaggt caacgaccgg ccacggcatg tcgtgatcag aaccgaaacc gagggcgccg
      301 ggacggtgcg gctcagcgtc cgggacgtgg gggtgggact cgaccctgcg gacctggagc
      361 gggtgttcga cgcgttctat accaccaaga gcactggcat ggggatcggg ctggcaatca
      421 gtcgttcgat catggagcgc catcacggcc gcctatgggc ggctcacaac gaggggccgg
      481 gagcgacgtt cgccttctcg cttccttgtg caccgaggtc ccagtgaacg aggagcgtcc
      541 gctggtggcg gtgatcgacg acgatgagtc ggtgcgggag tcgctccccg acctcctgcg
      601 ggagcttggc tttgcagtgg aggcctactc ctcggccgag gcgttcctgt cggccgggaa
      661 cctggcccgg acccggtgtc tcgttctgga cctggcgatg cccggtatgt cggggccgga
      721 tctgcaggag gaactccagc ggcgggggcg ggcgatcccg atcgtgttca tcacggcgca
      781 tgcgggtgag gcggcgcgtg cccgcctgat cgaaaagggg gcagccgagt gcctgttcaa
      841 gccattcagc gagggcgcgc tgctcgcggc cctcaagacc gccctgcggg tggcctgagt
      901 ccgttgcgaa tctgttacac ggcggaacta cgtatgggtg tcttggccct gtcccaacca
      961 gccgggaaat ctgctcccat gccccaggcc acgcccgttg tcttcgtggt tgatgacgac
     1021 gtctcggtcc gcgagtcgct cgaactcctg atccagagcg aaggctggca accggagacg
     1081 ttctcgacgt cccgggaatt tctcgcccgc ccccgaagca tggtgccgag ctgtctggtg
     1141 ctcgacgtcg gtctcccgga tctcaacggg ctggacctgc agcagcgcat cgtcgaccgg
     1201 gccgacatgc ccatcatctt catcaccggc cacggcgacg tgccgaccac ggttcgcgcc
     1261 atgaaggcgg gggcggtcga gttcctgacc aaacccttcg atgatgaggt gctgctgcag
     1321 gcggtgcgcc aggcgattgc ccggagcgag gctgccctgg ggcaggaaac caggctcagg
     1381 gagctgcgcg agcgctacgc gtcgctgagc cagcgggaac aggaggtcat ggggctggtc
     1441 gtctccggcc gcctcaacaa gcagatcggc gccgcgctgg ggatcagcga gatcaccgtg
     1501 aaggcgcacc ggggaaaggt gatgcggaag atgaaagcgg actcgctggc cgacctggtg
     1561 aagatgtcgg ccagcctcgg tctccgctca ggcggacgcg gcggctgacg cggtggcctc
     1621 cagcgccatc acgaggctga cctcgtccca cggcccgtca tgccgtttgc cattgatgaa
     1681 gaaggtcggg gtgccgttga cgccgctctt gaccccgctc atgaagtcgt cacgcacccg
     1741 cgtcttgagc tgctcttcct cgacctcacc gcgcaccagc tcggcatcga cgccggcctg
     1801 gcgggccatt cgggcaagtg cggcatcgct cagatcccgc tgatgctcgt agatcaggtc
     1861 gtgcatcacc cagaaggcct cctccccgcc atgttgcgcc accgcctcgg ccgcctccgc
     1921 cgcgtgcagc gcgtggggat ggatctcgtt gagcggaaag ttccggaaga cgaaccgcag
     1981 cttcttcccc agacgctcct gcacccgctt cacgatgggg taggccatgc cgcagtaggg
     2041 gcattcgtag tcgccgtatt ccaccagagt cagcgccgcc ttggggtttc cctggatgtg
     2101 gtcccggtcg ctcacgggga gggtgagatg gctcacgagg cacctcgcat ggcggctggc
     2161 gcctgcggga gctgttccag cgcttcgagg atcccatcgg ctcccgggtt caccccgacc
     2221 ggcgagacat agctccagcg aatgatgccg tcgctatcga tgacgaagag ggcccgctcg
     2281 ctggtaccgt cctcgctccg gtagacgccg tagcgccggg ccacttcgcc cttgggctcg
     2341 aagtcgctga gcagtgtcat gtggagatgg cgggtttcct tgaaggcggc gtggcaccag
     2401 gccccgtcca ccgagatgcc gaggagctcg gcgtgatagc ggtggaattc ggaagccagc
     2461 tcgttgtaga gcgccatctg gtccccgcac accggactga agtcggccgg gtagaagacc
     2521 aggatcacgg ggttgccccg gaactccgag agggaaaccc gctggtcggg tgtggcgtgc
     2581 agggtgaact ctggcgcctc ggtaccgggg gggagggcgt gatgcatcgg gccggactcc
     2641 ggaaggggat ggttgctcca gaccaagtaa ccgttgcacc gactttcgag caataatccc
     2701 aaggtataag tccggccgta tgacgacccg atcgcctcag gcgggcgagg gccggcctcc
     2761 actgaccgat ccggccgccg cgggcggacg gctgggtgga ctggggcagc agtcgagggg
     2821 gcagatgtcg tggctcggtc cgagacttcc gagcgcgcga cgctgagggc gttcggtcat
     2881 ccgctcctgg atgagctcgc ggagcgcgcg gatgtaggcc ggcgcggtgc ccaccgtggg
     2941 ggcccggacc agcgtcaccc cgagttccgt cgccagctgc atggcctcgg tatcgagatc
     3001 gtaccgcact tccatgtggt ccgagagaaa gcccagggga agcaccacga cctcgcgcac
     3061 gccccggccg gcaagcgtcc tcagatggtc gcggatgtcg ggctcgagcc agggaacctg
     3121 gggcggcccg ctccggctct ggtaggccag gtcccagctc cgaatcccgg cggcctcggc
     3181 gatcagacga cccgcctccc ggagttgcgc ttcgtacgcg ctggagcgcg ccatggagat
     3241 cgggatactg tgggccgtga agaccacccg ggcgccggcc ctgcgttccg atggcagcgt
     3301 cgccagcgcg gcgctcagat ggccggcgtt cgcctcgacg aagccgggat ggttgaagaa
     3361 cacccgcagc ttgtccacct cgggcgcgcc gctcccaact gcctccagcg cccgcgccac
     3421 gtcctcgcgg tactgccggc agccggagta ggagctgaac gccgaggtga ccagggcaat
     3481 ggcgcgggtg atgccgtcgt cccgcatccg ccggagggtt tcgtccagga aaggatgcca
     3541 gttccggttc ccgagataga ccggtagtgc gatcccatga ccggcgagct cgcgtcgcaa
     3601 cgcggacacc aggtcccgat tctgggcgtt gatggggctc accccgccga agtgcaggta
     3661 gtgctccgcc acttcgagca ggcgttcccg aggcacaccc cggccgcgag tggcgttctc
     3721 gagaaagggg agcacgtcgt ccggtccttc cggaccacca taggagacga ccagtaccgc
     3781 atcgtaggac cgggcccggt cctcgaacag cggccacctc gccgagctgg ctccgtgaat
     3841 gctcatgccg ccttccgccc ttcggccatc agcgccgcat cgaaggccgc ccccgtgagg
     3901 gccaactccg cttcgccgtg cgcggcagac agaaacgccg attcgaattg tgagggaacc
     3961 caatagacgc cctgatcgag gaggcgccgg aagacgcggc caaaacgcgc ggtatcggcc
     4021 cggcgggcag actcccagtc gtgcaccggc cgctcgctga agaagggagt gagcatggtc
     4081 cccatccgct ggacccggac cgggatgccg gcctttgcgg ccgaccgttc gatccgctgg
     4141 cccaggtcgg cggtggctgc cgcgatccgg tcccacactc cgggacgggc cagctcggtg
     4201 agcgtggcga tgccggcggc catcgccagg ggatttccgg cgagggtgcc cgcctgatag
     4261 accggtcccg acggcgcgat catctccatg atctcccgcc ggccgccgta cgcgcccacc
     4321 ggcagtccgc cgccgatcac cttgccgagc gtcgtgagat ccggcgtgac gccgtagagc
     4381 tcctgtgcgc cgccgggatg cacccggaat ccgcacatca cctcgtcgaa gatcagcagt
     4441 gatccgtgcg accgtgtcag ctgccgcagc ccttcgagga acccgtccgc cggcggtacg
     4501 agccccatgt tgccggccac cggttccacg atcacggcgg cgatctcgcc gggatagcgc
     4561 cggaagattt cctccagggt gcccaggtgg ttgtatggcg ccacgagggt gtcggccacg
     4621 gtgcccggcg ggacccctgg cgaatcggcc agccccagcg tggcgacccc ggagccggcc
     4681 tggaccagga gcatgtccgc atggccgtga tagcagccgc tgaacttcag gattcgcgac
     4741 cggccggtga acgcccgcgc cagccggagc gcgctcatcg tggcctcggt gccggagttg
     4801 acgaagcgga gcatctcgat ggcggggaag aaccggcgca ccagccgagc caggtcgagt
     4861 tccagcggcg tcggggcccc gaagctggtg ccccgggtaa tcgcgtccgc gagcgcggcg
     4921 gtgaccgcgg gatgggcgtg tccgaggatg agcgggcccc aggacatcat gtagtccacg
     4981 aagcgtgacc catccacgtc ttccagccag gcgccctcgc ccctggcaat gaacaggggg
     5041 tcgccaccca cggcccgaaa ggcgcgcacc ggcgaatcca ctccgcccgg cagcaggtgc
     5101 ttcgcttcgg cgaacagcgc ggcggatcgt tcaatgcgtc tcacgcggcc tccacgggaa
     5161 cggcgagact gtcggccgcg gcccaccccg aggcaatgca gtcgggaatt cccacgcctc
     5221 ggtaggaggc gccggcgagg cgaaggcccg gatgcccggt gagtctcgag ccgatccggg
     5281 cgagcctgtc agcatgaccc agggtgtatt gcggcatgcc gccgggccag cgaaccaccc
     5341 gcgagagcaa cggcgccgcg ttgatcccat ggacccgccg gagctcgtcc cgcgcaactc
     5401 cgaggaggat gtcgttgccg gccgtgacga tctcatcgtg accggctcgg cccaggaagc
     5461 agcggagcag cacggtatcg gccggcgctc gccccgcgaa cttgttggag gtccagctgc
     5521 acgcgaccag cggacctcct tcgacccgag gacttacgta cccgtacccg gccagcgggg
     5581 cgggcaccgc ggaacgcggg aaggccagcg acaccgtggc ggtggagaca acggcgatct
     5641 gtcggagcag agcggagagt tcccggtcca tcgactcgag cagggcggcg ctggccgggg
     5701 ccggggcggt gagcaccaca gcatcggagt cgatgatccg cccatcggag agctccaccc
     5761 ggtattcccg gccgatctcc ccctcccgaa ccgatcggac cggtgcgccg gtcaggatct
     5821 ggacacgcgt cagccgcgtg gccagcgcgg ccaccagatc gccgagaccg cccggcaggg
     5881 tcacgaagcc ggcgcgtcca ccagtggtgc ctcggtcacg gaatcgtgcc gtgagcatcg
     5941 gcttgaggag actcccgtgc cggagctcgg tctcccgcat ctgcgggaag gtggccatga
     6001 ggctcagccg gtcaccgtcg cccgcgtaga tgccgctcag gagcggctcg atcagccagt
     6061 cgtacgcctc ggcaccgaag cgccggcggg cgaactgggc caccgactca tcgccggccc
     6121 cgcgtgccgc ggggaccagc agctcgagac cggcccggag ccgcccggca ggagagagga
     6181 tgcccgtggt gaggagcggc atcagccgag acgggaccag tcccgagatg ccttccggaa
     6241 ggggatgcag ccttcccgcc cgtttcacga agctctgccg gagtgtgggg ttggtgccca
     6301 cgagctggtc ggcgatgccg agccggcgac agagctcgac ccccgcgggc ctggtagcga
     6361 ggaagcagtc cggaccccct tccagcacga agtcgccggt gcgctcggtg cggatctttc
     6421 cgcccagctg ctcctgcgct tcgagcagca cgatgcccgc cggatcgatg cgctcggcca
     6481 ggcgcattgc ggcggccagg ccggtgatgc cgccgccgat caccactacc gccgctcgca
     6541 tcggttttcc ccctcggcgt ggtactggtg taccatgtcg accactgccc gaacccggtc
     6601 aactggcgtg tccggcagga tgccgtggcc caggttgaag atgtggcccg ggcggccgcc
     6661 cgcgcgctcg aggacgtcga agactcggcg gcggagctct gggagcggag cgaagagggc
     6721 caccgggtcg agattgccct gaatcgcgcg ctggccgact cgcgtccagc cccggtccag
     6781 cggggtacgc cagtcgagac cgatcacgtc gccaccggcc tcggtcatcg cctcgagcag
     6841 gtggtcggtg ccgactccga agtgaatgcg ggggacgccg gttgtggcga ggcgatcgaa
     6901 cagcgcgcgg gagtgcggca ggacgtactg gcggtagtcg gtctcgctca actggccggc
     6961 ccagctgtcg aagacctgga gcgcctgcgc tcccgcgtcg gcctgggcga cgaggaagtc
     7021 cgcgaggacc cgggccagtg ccgagagcag ccgatgccac aactcgggag cctggtacat
     7081 catccgtttg ctctcgagca ggtgtcgcga ggggcctccc tcgatggcgt acgtcgccac
     7141 ggtgaacggc cctccgacga acccgatgag cggcgtccgg ggttcgagct ggcggcggag
     7201 caggcggatc gtctccagca ccggcccgag gtcggccgcc ggatcgaccg ggcgcagggc
     7261 gtctacctgc gaggccagcc ggatcgggtt cgcgatccgg gggccctcac cgctcacgaa
     7321 atcgagctca aggcccatcg gcaccagcgg aaggaggatg tccgcgaaga gaatcgcggc
     7381 atccactccc agcttccgca ccggttgcag tgtgacctcc gccgcgagat cgggccgcgc
     7441 acagatctgg agcagggtgt ggtgggcccg gatggcgcgg tactcctcca tgtagcggcc
     7501 ggcctggcgc atgaaccaga ccggtgtcac cggggttgca cggccgccag cggcggcaag
     7561 gaacgggacc tccgtctcca ggccggttac agccacgagg ccagcgcctc cgcgcccggc
     7621 tggtagatcc cgacatgcag cggccagtcg cgcgcggtat agacgcgggc ctcggcgccc
     7681 cggagttcct gcaccagggc gaggaaccgg agcatgtcct cggtctcgta gacgacgacg
     7741 aactcctggt cctgcagccc gaacgagtac agcagcagct gggtgatgtc cttgtactgg
     7801 gtaccgatcc tgatgtgccc ggccatcagg ttctgccgct tctcccggtc gagctgatac
     7861 cactccgccg tcttcacgaa cggatagacg atcaggtact gctgccggct cggcgcaaag
     7921 gcgtcgagct cctgggtgga ccgggtcttg gtgtactgcg aggggcgggt gtagccccac
     7981 aggacgtcgc tggggcgaat gtgggcccgg gccggcgcga tggccgccgc ccagccggcg
     8041 aagaagcggg cgctcgcccc cggcgaggcc gacgccgtcg cgctccacac caggaggtcg
     8101 ccctgactct cgagcgccga cagctggtag aggtgcaccg cgtcggccgt cgcgcggagc
     8161 cgggacagca ggccgtcacg ggtcgcacgg cgcgactccg gactcagctg ccagtagctg
     8221 tcggtgaacg agagcatggc gaagtgattg agcgtctcgg gggtcggttc ggccacggat
     8281 gtgctcctta ttcagcccgc cagccaggtg gccgcgtcgc gggcatggta ggtgatgatc
     8341 aggtcggcgc cggcccgccg gatgcccgtg aggatctcga gcgccacccg gcgctcgtcg
     8401 atccagccgc tggccgcggc ggccttcacc atggcgtact cgccgctcac gttgtacgcg
     8461 gccagcggca ggtcggggaa gcggtcacgc gtggcgcgga tcacgtcgag gtaggcgagg
     8521 gccggtttca ccatcaggcc atcggcccct tcggccgcgt cgagcgcatg ctcccgcatc
     8581 gcctcgcgta gattgcccgg atccatctgg tggctgctgc gatcgccgaa acgtggtgct
     8641 ccctccgccg cttcccggaa gggtccgtag aagccggagg cgtatttgac ggaataggag
     8701 aggatgggca gagtctcgaa gccgccggta tccagggcaa ttcggatggc gctcaccatg
     8761 ccgtcgagca tgcccgatgg cgcgaccacg tcggcacccg cctccgcgtg ggagagcgcg
     8821 atccggccca gcaggtcgag cgtgcggtcg ttcagcacgt agccatgggg caggtgtgga
     8881 tcggacgggc cggcaaggcc attgatgaga ccgcagtgac cgtggtcggt gtattcgcag
     8941 aggcatacat cggtcacgac caccatcccc ggtacggcct gcttgatcgc ccgtaccgcc
     9001 cgctgcacca ccccatcggc cggccaggca ccacttcctt ccggatcctt ggccgccggg
     9061 atgccgaaga gcagaatcga gccgatgccg agcgccgcga gcgcccgggc ctcctcaccg
     9121 atccggtcga ccggccattg ctgcacgccc ggcatggagg cgatcggctg gg
//
LOCUS       DATIFF010000323         1430 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_44066, whole genome shotgun sequence.
ACCESSION   DATIFF010000323 DATIFF010000000
VERSION     DATIFF010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1430
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44066"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..961)
                     /gene="carA"
                     /locus_tag="VLD58_04700"
     CDS             complement(<1..961)
                     /gene="carA"
                     /locus_tag="VLD58_04700"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HSB53628.1"
                     /translation="MTDRPAFVLLEDGAWFPGTTARPIDPAFGEVVFTTNLTGYQETF
                     TDPSYLGQIVVMTAPMIGNYGVNLEDMESSRPQVTGVVVRELSRHPSNWRSHRSLDDW
                     LSDAGVPVLEGIDTRRLTRHIRERGAMRGVVAEGRQPSRELTAQLLASPSMEGLDLAS
                     RATVREAWSEGEGPHVVAYDYGMKRNIVRMLVRTGCRVTVVPAETSPAEVRELNPDGL
                     FLSNGPGDPAAVDYALGTIRDLAGGGLPTFGICLGHQLVGLAFGGSTGKMPYGHRGGN
                     HPVRDLRTGHVLITTQNHGFAVVGDASGVPGAPGLEVTHVNLND"
     gene            complement(987..>1430)
                     /gene="secG"
                     /locus_tag="VLD58_04705"
     CDS             complement(987..>1430)
                     /gene="secG"
                     /locus_tag="VLD58_04705"
                     /inference="COORDINATES: protein motif:HMM:TIGR00810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HSB53629.1"
                     /translation="RLMFAFLLTLLILDSLLLSVVVLLQAGQGGGLASLGGGTTDTVL
                     GGRQAVTLLTKASWWCGGIFLLLALTLSLVPRNGGSSALQERLRATTPVAPAPSAPLP
                     LGGTPPAAATPAPGTAPATGTAPTTGTSPAPSPASGAPAPSQPKQ"
BASE COUNT          224 a          493 c          509 g          204 t
ORIGIN      
        1 ggtcgttgag gttcacgtgg gtcacctcga ggccgggggc gccgggaacc ccgctggcgt
       61 ctccaaccac cgcgaagcca tggttttgcg tggtgatgag gacgtggcct gtgcgcaggt
      121 ctcgcaccgg gtggttgccg ccccggtggc cgtacggcat cttgccggtg gagccgccaa
      181 aggcgaggcc gacgagctgg tgaccgaggc agatgccgaa ggtcgggagg cccccacccg
      241 ccagatcacg aatggttccg agcgcgtagt ccaccgccgc cggatcgccc ggcccgttcg
      301 aaagaaagag cccgtcgggg tttagctcac ggacttcagc cggcgacgtc tccgccggca
      361 cgacagtcac ccgacagccg gtccgcacca gcatccgcac gatgtttcgc ttcatcccgt
      421 agtcatatgc cacgacgtgc gggccctcgc cctcgctcca cgcctcccgg acggtggccc
      481 gggatgcgag atcgaggccc tccatcgagg gcgacgccag caactgcgcg gtcaactcgc
      541 gactcggctg gcgtccctcc gccaccacgc cccgcatggc gccgcgctcc cggatatggc
      601 gggtcaggcg gcgggtatcg atgccctcca gcaccggcac gccggcgtcg gacagccagt
      661 cgtccaggct gcgatgcgag cgccaattcg agggatggcg gctcaactcg cgcacgacca
      721 cccccgtcac ctgcggacgg gaggactcca tgtcctccag gttcacgccg tagttgccga
      781 tcatcggcgc ggtcatgacc acgatctgcc cgagatagct cggatcggtg aacgtctcct
      841 ggtatccggt gaggttggtg gtgaacacca cttctccgaa tgccgggtcg atgggccggg
      901 ccgtggttcc cgggaaccag gcgccgtcct cgagtaaaac gaaagcgggg cgatccgtca
      961 tccggtcacc ccgcgctcga tcgccgtcac tgcttgggct gggagggagc cggcgctccc
     1021 gatgcgggcg aaggggccgg cgaggtcccg gtggtaggcg ccgttcccgt ggccggtgcg
     1081 gtgcccggcg ccggcgtcgc ggcggctgga ggcgtgccgc cgagcggcag cggcgcgctg
     1141 ggcgcgggtg ccaccggcgt ggtggcgcgc aggcgctcct gcagcgcgct cgagccgccg
     1201 ttccgaggca cgagcgacag cgtcagggca aggagcagga agattccgcc gcaccaccag
     1261 gacgccttgg tcagcagggt gaccgcctgc cggcctccaa ggacggtgtc ggtggtgccc
     1321 ccgccgaggg aagccagccc tccaccctgg ccggcctgga gcagcacgac cacggacagg
     1381 agcagcgagt cgagaatgag cagcgtgagc agaaatgcga acatgagtct
//
LOCUS       DATIFF010000324         1740 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_351257, whole genome shotgun sequence.
ACCESSION   DATIFF010000324 DATIFF010000000
VERSION     DATIFF010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_351257"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(29..1264)
                     /locus_tag="VLD58_04710"
     CDS             complement(29..1264)
                     /locus_tag="VLD58_04710"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HSB53630.1"
                     /translation="MTTTFSDDPEYTQFCHQELQDPYPLFSRLRERDPLHWCGPMHMW
                     LVTRYEDVHAGLRDTKRLISSRRRMYTDPLPPEKREAAQPLVEHISLWLQNLNPPHHT
                     RLRTLVNLAFTPRMLQALAPRIERVVDELLDGVCGKERVDFVKSFCLPLPAIVICEML
                     GIPEAESARYRQVVEQLIPFSSGAGPGLTQAVDPARRALDELLAYFDRLIAERRARPQ
                     SDLISAMAAAEADGDRLSREELFALCVFLYVAGHETTVSLLGSGTLALLQHPEQFDRL
                     RADPDGLVEGAVEEFLRFESPVTRAVRVPSEDFDWHGRSIRQGQTITMLIGAANRDPA
                     VFDDPDRLDIARHPNRHLGFGHGIHFCLGAPLARLEANIAFRAIARRLPRMRLGGGEV
                     RYRPALGIRSLESLPVTGL"
BASE COUNT          259 a          576 c          626 g          279 t
ORIGIN      
        1 tggctcgacc gcggccgcaa ggcgctccct atagccccgt gacggggagc gattcgagcg
       61 agcggatgcc aagggccggc cggtaccgga cctcgcctcc gccgaggcgc atccgcggca
      121 gtcgccgggc gatggcgcgg aaggcgatgt tcgcctcgag ccgggccagg ggagcaccca
      181 ggcagaagtg aatcccatgc ccgaagccca ggtgccggtt ggggtggcgc gcgatgtcca
      241 gccggtccgg gtcgtcgaat acggcgggat cacggttcgc cgcgccgatt agcatggtga
      301 tcgtctggcc ctggcggatg ctccggccgt gccagtcgaa atcctcgctg gggacccgca
      361 ccgcacgggt gaccggcgac tcgaagcgga ggaactcctc gacggcccct tccacgaggc
      421 cgtccgggtc ggcccggagc cggtcgaact gctccgggtg ctggagcagt gccagcgttc
      481 cgctgccgag caggctgacg gtcgtctcgt ggccggcgac gtagaggaac acgcacaggg
      541 cgaacagttc ctcccggctg agccgatcgc catcggcctc ggccgcggcc atcgcgctga
      601 tcaggtcgct ctgcggccgt gcccggcgct ccgcgatcag tcggtcgaag taggccagga
      661 gctcatccag cgcccggcgg gccggatcga ccgcctgggt cagacccggg ccggccccgg
      721 agctgaacgg gatgagctgc tccaccacct ggcggtaccg cgcgctctct gcctccggaa
      781 tgccgagcat ctcgcagatc acgatcgccg gcagcgggag gcagaacgac ttgacgaagt
      841 cgacacgctc cttcccgcag acgccgtcca gcagctcgtc gacaacgcgc tcgatgcgtg
      901 gcgcgagtgc ctggagcatg cgcggcgtga aggccagatt caccagggtg cggagccgcg
      961 tatgatgggg cgggttgaga ttttgcagcc acaggctgat gtgctcgacg agcggctgcg
     1021 cggcctcgcg cttctcgggc ggcagcgggt cggtgtacat gcgacggcgg ctggagatca
     1081 accgcttcgt gtctcgcagg ccggcgtgca cgtcctcgta gcgggtcaca agccacatgt
     1141 gcatgggccc gcaccagtgc agcgggtccc gttcgcgcag ccgcgagaac aggggataag
     1201 ggtcctgcag ctcctggtgg cagaattgcg tgtattcggg gtcgtcgctg aaggtggtgg
     1261 tcatggcccg tgcaccgtcg ccttggccca ggggtcattc ggaaccggcc ggtcgtcttg
     1321 ctcctctgac accggccttg tggatacccc ggctcggccc gcctgtcaag atgactctca
     1381 agggaagtct tggcctggcg ggggccgcgg gctataatcc cgatccacgg aagaggtcgg
     1441 tggatgatgc tggcgacgat ccggacatac ctcgagatga tccgcttctc gcacaccctc
     1501 tttgccctgc ccttcgcgct catgggggcg gtgctggcgg cgggcggggt tccctaggga
     1561 aggcagctcg gctggatcct ggtagccatg gtcggtgccc ggagcggcgc gatgggggtg
     1621 aaccgcatcg ccgaccggca cctggacgcc gtcaacccgc gcaccaagga tcgcgccctc
     1681 ccccagggcc ggatcggcct gcgggaggcc ggtatcttcg tcgttgtctc cttcggagtc
//
LOCUS       DATIFF010000325         1067 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1890223, whole genome shotgun sequence.
ACCESSION   DATIFF010000325 DATIFF010000000
VERSION     DATIFF010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1890223"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..272
                     /locus_tag="VLD58_04715"
     CDS             <1..272
                     /locus_tag="VLD58_04715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB53631.1"
                     /translation="VVLRHAFRNALLPVVTVLGLDFGSYLTGSILTETIFSWPGVGRY
                     VLTAIDKRDLPAVQGSILFLSLVFVIVNLVTDMVYAKVDPRIAYD"
     gene            265..>1067
                     /locus_tag="VLD58_04720"
     CDS             265..>1067
                     /locus_tag="VLD58_04720"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004185 - serine-type carboxypeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HSB53632.1"
                     /translation="MTEGGKAGATAQGRKGATVDWATPLFRAVLLLCALAPVRPSASS
                     AQSLSKRLDARLDAAPFDRALWGVALVDQKGKLVYGRNEHRLFTPASNAKLVVSAVAA
                     AMLPPGLTVRTSLYAAGPVTNGVLQGDLVLYGRGDPTIGTRCYGLDTLREGACDRDPF
                     ARLRQLADTLKARGVREVRGDVVGDGSFFEPLLVHPGWEQFDLNWWYAAPVSGLGFHD
                     NSIDFTWAPGLAPGAPALISFSPDLGELLFENRTVTVPAGGVTDIGDRF"
BASE COUNT          148 a          375 c          371 g          173 t
ORIGIN      
        1 gggtggtgct ccgccacgcc ttccggaacg cgctcttgcc ggtggtgacg gtgctgggcc
       61 tcgacttcgg cagctacctc accgggtcga tcctgacgga gacgatcttc agctggcccg
      121 gcgtggggcg ctacgtgctc accgccatcg acaagcgcga cctccccgcg gttcagggga
      181 gtattctgtt cctcagtctg gtgttcgtga tcgtgaacct ggtgaccgac atggtgtacg
      241 cgaaggtgga cccgaggatc gcatatgact gagggcggga aggcgggcgc aacggcgcaa
      301 gggcgcaagg gcgcaaccgt cgactgggca accccgctgt tccgggcggt gctgctgctt
      361 tgcgcccttg cacctgtgcg ccctagcgcc tcatcagccc aatcgctttc caagcggctc
      421 gacgcccgcc tcgacgcggc gccgttcgac cgggcgctct ggggcgtggc gctggtggac
      481 cagaagggca agctggtcta cggccggaac gagcaccggc tcttcacccc ggccagcaac
      541 gccaagctgg tggtgagcgc ggtggccgcg gcgatgctgc cgcccgggct gaccgtccgg
      601 accagtctct acgccgccgg cccggtgacc aacggagtgc tccagggcga cctggtgctc
      661 tacggccggg gcgatcccac catcggcacc cgctgctacg gcctcgacac cctgcgcgag
      721 ggcgcctgcg accgtgaccc gttcgcccgg ctccgccagc tggccgacac gctcaaggcg
      781 cgcggggtac gcgaagtcag gggtgacgtg gtgggcgacg gcagcttctt cgagccgctc
      841 ctggttcacc cggggtggga gcagttcgac ctcaactggt ggtacgcggc gccggtgagc
      901 ggcctcggct tccacgacaa ctcgatcgac ttcacctggg ccccgggact cgcccccggc
      961 gcgcccgcgt tgatcagctt cagccccgac ctgggcgagc tcctgttcga gaaccggacc
     1021 gtgaccgtgc cggccggcgg cgtcaccgac atcggcgacc ggttctt
//
LOCUS       DATIFF010000326         1980 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1581929, whole genome shotgun sequence.
ACCESSION   DATIFF010000326 DATIFF010000000
VERSION     DATIFF010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1980
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1581929"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(337..1724)
                     /locus_tag="VLD58_04725"
                     /pseudo
     CDS             complement(337..1724)
                     /locus_tag="VLD58_04725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611176.1"
                     /note="programmed frameshift; incomplete; partial in the
                     middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          304 a          645 c          703 g          328 t
ORIGIN      
        1 gatgctggat gggcgttacg gcgtcatccg agagacccca gacggcgttc gggtccgggt
       61 ggatgaggca caagcgatcg gttgtggcaa cagactggct actgcttgag tggccttgct
      121 cgggagaggg taatctggct cgccggaagt tgtcaacgat tgtgagacac gatcgcgtcg
      181 catttactgt cgtgcctcga ctgtcgccgg cgtgggcggg gtgaaatcgc ttgccgcggg
      241 ggatacccag gtagaggccc ccgtccagat cgtcgatcct gagccaactg tggcggtcgc
      301 cgagagcccg tcggagtcgt ccaagcccgt cggaggggtt gtgggcgccg gcgggttgat
      361 ccagacggcg ccgggcagtg ccggcggctg aggcggtcgg tgcacgaagc gctccggatg
      421 agcggcatag gcggcggcca agacctcggc gcgccccgcg cggacctgct cagcgtggcc
      481 gtagtgcacc atggcgggcg tgagccacgc gatgccgcca tgccgatgct gcgtgttgta
      541 ccagaggaaa aacggatggc agaaggcgcg agcggcttcc cggctggtga agcgatcggg
      601 aaagtccggt cggtacttga gggtcttgaa ttgcgcctcg gagaacgggt tgtcgttgga
      661 gacgtgaggc cggctgtggg tgcgggtaat gcccaggtcg gccagcaaca gggccaccgg
      721 cttagaggtc atgctcgagc cgcgatcggc gtggacggtc agctggccgg cggtgatccc
      781 ctgcttggca caggtgagcg cgatcagccg ctcggccagg attgcgctct cccgatgcgc
      841 gaccatccat ccgaccacgt agcggctaaa gatgtcgagg atcacgtaga ggtagtagta
      901 ggtccacttg gctggcccca gcagcttggt gatgtcccag gaccacacct cgttgggccg
      961 ggtcgcgagc agttccggct tgggggcgac gtgccgcagc tggttgcgcc gctcgcggat
     1021 ctcttgggcg gccgccaaca cacgatacat cgtgcggagc gagcagaggt agcggccctc
     1081 gtccagcagg gtcgcgtaga cctcggccgg cgcgagatcc acgaagcgcg ggtcgtgcag
     1141 ctcgtcgcgc acggcgtcgc gctcggccgc cgtgagcgcg cgcggaggct ggggccgagg
     1201 cgcccgcgcc ggacagcctc ggcgccgccg atacaccgtg gcccggctca ctcccagccc
     1261 ccgacacgcc gcctgtgtgc ccaccgctgg cgccagatcg ctcaccgcgc tcagcaaccg
     1321 ctcccggcgt cggggccagg cttcaggggg atccccaaaa tctcggagac ttttttttgg
     1381 acaccgatga tggtctcggc ttggcggagt cggtgcgtca gctgggcgtt ctcgcgctcc
     1441 agctcggcca cccgacgcgc gagtggggaa gacggcgccg cggggcggcc gcgcttcttg
     1501 gggctcagcg cggccaggct accctgctcc cattgccgcc gccacgtcgt caggtgcgag
     1561 gagtacaacc cctcccgccg tagcagcgcc cccaattcgc ccgacccggt gcaggcgtcg
     1621 gcctggcgca agacccggag cttgtactcg gcggtgaacc gccgacgtgc cgcgcgctcc
     1681 gtcacttcgg gatctgcggg tacagctggt gccacgacct gcagaggtac ggcaccgccg
     1741 ccactcacag ctcgcgcact cggagcatca ggcccaacct ccttgccggc tgccgccggc
     1801 cgccgcgggg gagtagcctt cttcgggctc gccatcgctg agccacctct ctccgccctc
     1861 tacagtaatt ccaggggagg tcagtgtctc actatcgttg gcacagaggg tggagctgcc
     1921 cgagcgacta cgcatcccgt caacgctcat cgaaacccgg tcggtgtagt gccgactttt
//
LOCUS       DATIFF010000327         1609 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1735930, whole genome shotgun sequence.
ACCESSION   DATIFF010000327 DATIFF010000000
VERSION     DATIFF010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1735930"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..663
                     /locus_tag="VLD58_04730"
     CDS             <1..663
                     /locus_tag="VLD58_04730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53633.1"
                     /translation="PSGLAGGFLAQPFLSGAPLQPGTREPGLIQRLADYLGYLSREQR
                     IEPETVADLSPMIELNTAPVIRRSHVAALKHRLGPGFQPLERPTRLDARMFPHEWLRT
                     TQGLLKTDGVEHHDDPFYPGPHDIAWDVAGTCLEFRLRGQERQELIGAYRRASGDSGI
                     AGRLPWFALAYLAFRVGYTRLAAETLRIGEDAERFRRSITRYTALIRMELADTSGAAW
                     RG"
     gene            708..1286
                     /locus_tag="VLD58_04735"
     CDS             708..1286
                     /locus_tag="VLD58_04735"
                     /inference="COORDINATES: protein motif:HMM:NF024769.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HSB53634.1"
                     /translation="MTDFPLTSFKTAAEWRAWLRRHHQSAKSILVRLRKSHAKTGIAY
                     AEALDEALCYGWIDGVRRAVDGESFSIRFSPRKAKSIWSLVNVRHAERLISAGRMAAA
                     GQKAFDARDAGRTGVYSFEQKKHELAPPYRKRFQARRKAWGYFEQEAPWYRRTSTHWV
                     MSARKEETRERRLATLIQCCTDGVRIPPLRRP"
     gene            1303..>1609
                     /locus_tag="VLD58_04740"
     CDS             1303..>1609
                     /locus_tag="VLD58_04740"
                     /inference="COORDINATES: protein motif:HMM:NF018595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(4Fe-4S)-binding protein"
                     /protein_id="HSB53635.1"
                     /translation="MPAPLQVYHTRNLIVTYDPGVCMNFGDCLRANREVFDRSRPEWI
                     DLRAADPDAIAEIAARCPSGALHAIRPNRPGERPLPSAGVSVHATPNGPIVVKGKVTL
                     "
BASE COUNT          263 a          587 c          518 g          241 t
ORIGIN      
        1 ccatcggggt tggcaggtgg attcctggcc caacccttcc tgagcggggc gccgctccag
       61 ccgggcaccc gcgagccggg actcatccag cggctcgccg actacctcgg ctatctcagc
      121 cgggagcagc ggatcgaacc ggagaccgtg gccgatctct ctcccatgat cgaactcaac
      181 acggccccgg tgatccggag aagccacgtc gccgcgctca agcaccggct cggccccggg
      241 ttccagccgc tcgagcggcc cacccggctc gatgcgcgga tgtttcccca cgagtggctc
      301 cgcaccaccc agggcctgct caagaccgac ggcgtcgagc atcatgacga tcccttctat
      361 cccggtcccc acgacatcgc gtgggacgtg gcgggcacct gtctcgagtt ccggctcaga
      421 ggccaggaac gccaggagct gatcggggcc tatcgccgcg ccagcgggga cagcggcatc
      481 gccgggcgcc tgccctggtt tgccctcgcg tacctggcct tccgggtcgg ctacacccgg
      541 ctcgccgccg agacgctccg gatcggagag gacgccgagc ggttccgccg ttcgatcacc
      601 cgctacaccg ccctgatccg gatggagctg gcggatacca gtggagcggc gtggcgcggc
      661 tagtctgatg acttgcaaac cgcgccgggc ggtcccattg tagccgcgtg accgactttc
      721 ccctgacctc gttcaagacc gcggcggaat ggcgggcctg gctccgccgc catcatcaga
      781 gcgccaagtc aatcctggtt cggctccgga agagccatgc gaagaccggc atcgcctacg
      841 ccgaagcgct cgacgaggcg ctctgctacg gctggatcga cggggtgcgg cgggcggtcg
      901 atggcgagtc cttctccatt cgattcagcc cccgcaaggc gaagagcatc tggagtctgg
      961 tcaacgtccg gcacgccgaa aggctgatca gtgccggccg gatggccgct gccggccaga
     1021 aggcctttga cgcccgtgac gccgggcgca ccggggtgta ctccttcgaa cagaagaagc
     1081 atgagctggc gccgccgtat cggaaacgct tccaggccag gcggaaggcg tggggctact
     1141 tcgagcagga agccccgtgg taccgccgga ccagcaccca ctgggtcatg agcgccagga
     1201 aggaagagac ccgggagcgc cggctcgcga ccctcattca gtgttgcacc gatggtgtgc
     1261 gcattccccc gcttcgccgt ccctgagccc aaggccgccg ccatgcccgc gccgctccag
     1321 gtctaccata cccgcaacct catcgtcacc tacgacccgg gtgtctgcat gaacttcggc
     1381 gactgtctcc gcgccaatcg ggaggtcttt gaccggagcc gtcccgaatg gatcgatctc
     1441 agggccgccg accccgacgc cattgccgag atcgcggccc ggtgcccgag cggggcgctc
     1501 cacgccatcc gccccaaccg cccgggagag cggccactcc catccgccgg agtctcggtg
     1561 cacgccacgc ccaacggccc gatcgtggtg aagggcaagg tcaccctcg
//
LOCUS       DATIFF010000328         3640 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_44330, whole genome shotgun sequence.
ACCESSION   DATIFF010000328 DATIFF010000000
VERSION     DATIFF010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3640
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44330"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(174..1310)
                     /locus_tag="VLD58_04745"
     CDS             complement(174..1310)
                     /locus_tag="VLD58_04745"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HSB53636.1"
                     /translation="MTAVNYTPRKLAHEGQRTLPQAYFTDPAILAQEQERLLLNGWVA
                     VGRAEQVASPGQYFLADVAGQSIIVLRDRGGVIRAFYNVCAHRGSQLCEEHQGQFSET
                     LQCPYHAWTYALDGRLVGAPSTSDLAGFSKADWPLRPVAVGCWEGFLFLNLSPRPEPF
                     ERYMAPVWSRFARFGSEHLRLGRTIEYTVHANWKLIVQNYSECYHCALVHPELTRLTP
                     PTAGENDLTEGPFLGGYMDLNNPAGSMTMSGRVCGLPVSADIPKEDHGRVYYYSLMPN
                     MLLSLHPDYVMYHILWPRSVNQTSIFCSWLFHPDTLANPAFDINDGISFWDMTNRQDW
                     HVCELSQRGIESRGYQPGPYSHRESIPASFDRYYLKALGHGGAD"
     gene            1437..3026
                     /locus_tag="VLD58_04750"
     CDS             1437..3026
                     /locus_tag="VLD58_04750"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSB53637.1"
                     /translation="MQSYDAIIIGGGHNGLVTAAYLARAGRKVLVLERRELVGGCAVT
                     EELWPGFKVSTASYVNSLFRPEIIRDLELKRHGFAMLPRSPSSFTPFPDGRYLLMGPD
                     KEMTHREISKFSKKDAENLPKYEAMLERVADFLEPTLIQTPPNPWSMKPGNLIELLKL
                     GLAFRRLGTDGQKAIEILTGAANPILDRWFESEEVKATIATDAIIGAFATPSMPGTAY
                     VLFHHVMGECDGVRGVWGYVRGGMGGLSNAIAAAAREKGAEIRTSAAVSRILVQGGQA
                     VGVALADGTEIRAKKVISGVDANVTFLKLMDPKELPFEFAESVRHLDYASGSAKINLA
                     LSEVPDFTCLRGNTPGPQHRGTIHLCPTRDYIEKAFDCAKYGYISENPIIEATIPSSL
                     DDTVAPKGMHVMSMFTQYFPYKLAPGLSLEAEKEKYADRCFDMMDRFAPNFRRSVIAR
                     QVLSPVDLEQRFGLTGGNIMQGVMSLSSLSFMRPVPGYADYRTPVRGLYLCGAATHPG
                     GGVMGACGYNAAREILRDLKR"
     gene            3038..3373
                     /locus_tag="VLD58_04755"
     CDS             3038..3373
                     /locus_tag="VLD58_04755"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSB53638.1"
                     /translation="MTDYHLTLADGLAKLPGGNGERFVELFGHGTLSVELYAPRGSDP
                     QQPHSRDEVYVVVQGRGRFLNGGVRHPFGPGDVLFVPAGMVHRFEDFSDDLAVWVFFY
                     GPEGGEALR"
     gene            3370..>3640
                     /locus_tag="VLD58_04760"
     CDS             3370..>3640
                     /locus_tag="VLD58_04760"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSB53639.1"
                     /translation="MTGEPGPGSALQRTLHRDYYRTEALFQRERERIFWREWFCLARE
                     EELPLPGAWLAREVAGESVLLVRTREGALAGHYNVCRHRGARLVPE"
BASE COUNT          585 a         1201 c         1293 g          561 t
ORIGIN      
        1 gatcctgagc gcggtcggct tgctgaggcc ctgcgccttg gccagctcgg ccagagtcca
       61 gttggggcgc tcatcggtga agccgtccag gatcgcgagc gcccgccaca ccgcctgcgc
      121 tccctgggga gcggaggcgc ggcggcgctg tcgaagaccc gcaacggcct ggctcagtcg
      181 gccccgccgt ggcccagggc cttgaggtag tagcggtcga acgaggcggg aatcgattcg
      241 cggtgcgagt atgggcccgg ctggtagccg cgcgactcga tgccccgctg gctcagctcg
      301 cagacatgcc agtcctggcg gttggtcatg tcccagaagg aaatcccgtc gttgatgtcg
      361 aaggcgggat tggccagtgt gtcgggatgg aagagccagg agcagaagat gctcgtctgg
      421 ttgacgctcc tgggccagag gatgtggtac atcacgtaat cgggatgcag gctcagcagc
      481 atattgggca tgagggagta gtagtacacc cgcccatggt cttccttggg aatgtcggcg
      541 ctgaccggga ggccgcagac ccggcccgac atcgtcatgc tgccggccgg gttgttgaga
      601 tccatgtagc cgccgaggaa cggtccctcg gtgagatcgt tctcgccggc ggtgggcggc
      661 gtgagcctgg tgagctccgg atgcaccagg gcgcagtggt aacactcgga gtagttctgg
      721 acgatgagct tccagttggc gtggaccgtg tactcgatgg tccggccgag gcggagatgc
      781 tcgctgccga agcgggcgaa gcggctccac acgggggcca tgtagcgctc gaacggctcg
      841 ggccggggcg agagattgag gaacaggaac ccttcccagc agccgacggc caccggccgg
      901 aggggccagt cggccttgga gaagcccgcg agatcgctgg tcgagggcgc gcccaccagc
      961 cggccatcga gggcataggt ccaggcgtga taggggcact gcagggtctc ggagaactgg
     1021 ccctggtgct cctcgcagag ctggctgccg cggtgggcgc agacgttgta gaaggcccgg
     1081 atcacgccgc cccggtcgcg gagcacgatg atgctctggc cggccacgtc ggccaggaaa
     1141 tactggcccg ggctcgccac ctgctcggcc cggcccacgg ccacccagcc gttgagcagc
     1201 agccgctcct gctcctgggc caggatggcg ggatcggtga agtaggcctg cggcagggtg
     1261 cgctgcccct cgtgggccag cttgcggggg gtgtagttca ccgcggtcat cggggctcct
     1321 ccggcgaggc agacgggcct tcccaaaacg ggaccggcgc cacagattat gaaacgccgt
     1381 tccacattgt ggaatgaaga tcatcgccgg gccgcacacc gtcaagaggt cagcgcatgc
     1441 agagctacga cgccatcatc atcgggggcg gccacaacgg cctcgtcacc gccgcctacc
     1501 tcgcccgcgc cggccgcaag gtcctggtcc tcgagcggcg ggaactggtg ggcggctgcg
     1561 ccgtgaccga agagctctgg cccggattca aggtctccac cgcgtcctac gtcaacagcc
     1621 tcttccgccc cgagatcatc cgggacctcg agctcaagcg gcacggcttc gccatgctgc
     1681 cccggagccc gtcgagcttc acgcccttcc cggacggccg ttacctcctg atggggccgg
     1741 acaaggagat gacccaccgg gagatctcca agttctcgaa gaaggacgcg gagaacctgc
     1801 cgaagtacga ggcgatgctc gagcgggtgg ccgacttcct cgagccgacc ctgatccaga
     1861 cgccgcccaa tccctggtcg atgaagcccg gcaacctgat cgagctcctc aagctcggcc
     1921 tcgcgttccg gaggctcggc accgacggcc agaaggccat cgagatcctg actggcgccg
     1981 ccaacccgat cctcgaccgc tggttcgaat cggaagaggt gaaggccacc atcgccaccg
     2041 acgcgatcat cggcgccttc gccaccccct cgatgccggg cacggcctac gtgctcttcc
     2101 atcacgtcat gggggagtgc gacggggtgc gtggggtctg gggctatgtg cggggcggca
     2161 tgggcgggct ctccaacgcc atcgccgctg ctgcgcggga gaagggcgcg gagatccgga
     2221 ccagcgcggc ggtgagccgc atcctggtgc agggcggcca ggccgtgggc gtggcgctgg
     2281 ccgacggcac cgagatccgc gccaagaagg tgatctccgg agtcgatgcc aacgtcacct
     2341 tcctcaagct gatggacccg aaggagctgc cattcgagtt cgccgagtcg gtgcggcacc
     2401 ttgattacgc cagcggcagc gccaagatca acctggcgct ctcggaggtg ccggacttca
     2461 cctgtctccg gggcaacacg cccggaccgc agcatcgcgg caccatccat ctctgcccca
     2521 cccgcgacta catcgagaag gccttcgact gcgccaagta cggctacatc tcggagaacc
     2581 cgatcatcga ggccacgatc ccttcgtcgc tcgatgacac ggtggcgccc aagggcatgc
     2641 acgtgatgtc gatgttcacc cagtacttcc cctacaagct cgccccgggc ctctcgctgg
     2701 aggcggagaa ggagaagtac gccgaccgct gcttcgacat gatggaccgg ttcgccccca
     2761 acttccggcg ctcggtgatc gcccggcagg tgctgtcgcc ggtggacctg gagcagcgtt
     2821 tcggcctcac cggcggcaac atcatgcagg gggtgatgtc gctgtcgagc ctgtcgttca
     2881 tgcggccggt gccgggctac gccgactacc ggaccccggt gcgcgggctc tacctctgcg
     2941 gcgccgcgac ccatccggga ggcggggtga tgggggcgtg cggctacaac gcggcgcggg
     3001 agatcctgcg ggacctgaag cgctgatcgg gagcgccatg accgactacc acctcaccct
     3061 cgccgacggc ctcgcgaagc ttccgggcgg caacggagag cgcttcgtcg agctgttcgg
     3121 ccacggcacg ctgagcgtcg agctctacgc gccgaggggg agcgacccgc agcagcccca
     3181 cagccgggac gaagtgtacg tcgtggtcca ggggcggggc cggttcctca acggcggggt
     3241 ccggcacccg ttcggcccgg gggacgtgct gttcgtgccc gcggggatgg tccaccggtt
     3301 cgaggatttc agcgacgacc tggcggtctg ggtgttcttc tacggacccg agggcggcga
     3361 ggcgctgaga tgaccgggga gccgggtccg ggctcggcgc tgcagcggac cctgcaccgg
     3421 gactactacc gcaccgaggc gctgttccag cgggaacggg agcggatctt ctggcgggag
     3481 tggttctgcc tggcccggga ggaggagctg ccgctccccg gcgcctggct cgcccgcgag
     3541 gtggcgggcg agagcgtgct cctggtgcgc acccgcgagg gcgcgctggc cggccactac
     3601 aacgtgtgcc gtcaccgcgg cgcgcggctg gtgcccgagt
//
LOCUS       DATIFF010000329         4841 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_198801, whole genome shotgun sequence.
ACCESSION   DATIFF010000329 DATIFF010000000
VERSION     DATIFF010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4841
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198801"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..883
                     /locus_tag="VLD58_04765"
     CDS             <1..883
                     /locus_tag="VLD58_04765"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HSB53640.1"
                     /translation="SALATFSSVVPAGLAAQDYDSGPVRVFTFGRPRIGIRVETKADA
                     EKDKIGARVGSVTEGGPADKAGIKEGDIITRFNGVALGGAKSEDEDDTSGPGLKLVEL
                     AQKLDAGDTVDVEFRRGTESKKAKIVAADMGDFAMRRFDVETPMPRGTMRMPRMEIQP
                     GPEGMRMFQGGPGDIRIFTNGRFEGGLELADLNADLGEYFGAKEGVLVLKAPADSGNP
                     LKAGDVIVSIDGRPTKSEEQARRILRSYGEGETAKLEVLRKQKKMTLSYKPEREGEWK
                     MRIPKPTRRPGAAPERT"
     gene            complement(976..1851)
                     /locus_tag="VLD58_04770"
     CDS             complement(976..1851)
                     /locus_tag="VLD58_04770"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HSB53641.1"
                     /translation="MTQAPEDPQPARPGKDRYDYFGISHQGLVRTENQDCFLIGSIHK
                     AMQVHQTSLPEETLGELVSPSRGYVFLVADGVGGIPGGKDASRTALGAIIDYVLRAMD
                     LYVRLDQDQEPAFLAELQRSVERSHEAVRKAGAADDERLGMATTLTMVCIRWPRGYLV
                     HVGDSRCYVLRDGQLNLLTKDQTMAQAMVDAGALSPDQAERSGLKHVLYSAIGAMRAE
                     PMTVTTDIQLNDIMLLCTDGVTKHVSDDEIRDALLACDSSEKTARDLVQLALDRGGSD
                     NTTLIIGRYKPANEG"
     gene            complement(1890..2576)
                     /locus_tag="VLD58_04775"
     CDS             complement(1890..2576)
                     /locus_tag="VLD58_04775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53642.1"
                     /translation="MRRWLNVVLLFPLLATPVVAQEGEMQDMVMSGPHITLTPMRPLR
                     SGDQARADSIVQIARAAAEKYRDVAVAEADGFKRFAPMVKRQKVYHYTNRVAGLKARF
                     TFDPAAPTSLLYRDGPDGKLELIGVMYTAPASASLEDLDQRIPLSIARWHQHTNLCLP
                     PVSSDMEAAMSGRHPQFGPRGSITTEEACQAAHGHWKTRMFNWMVHVNVFASDPAEVW
                     HDDHGGMRHH"
     gene            2679..>4841
                     /gene="hrpB"
                     /locus_tag="VLD58_04780"
     CDS             2679..>4841
                     /gene="hrpB"
                     /locus_tag="VLD58_04780"
                     /inference="COORDINATES: protein motif:HMM:TIGR01970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase HrpB"
                     /protein_id="HSB53643.1"
                     /translation="MPTLPIEPVLPDLAAALAGPGHAVLQAPPGAGKTTRAPLYLLDQ
                     PWLSGKKILVLEPRRLAARAAARRMAQMLGERPGQTVGYRVRRESLTGPATRIEVVTE
                     GILTRMLQGDPALEQAGLVIFDEFHERSLHADLGLALTLQSRAVLRPDLRVLVMSATL
                     DGAAVAALLGGAPVITSEGRAFSVDTRYRPRRPETRLEPAVAAVVREALAADEGDILV
                     FLPGAGEIHRAGELLRDDESGRVAVLPLHGTMSAEEQDAAIAPSPPGRRKVVLATSIA
                     ETSLTIEGVRIVVDGGLARVPKFSPRTGMTRLATVRVSRASADQRRGRAGRTAPGICY
                     RLWGQEEDHHLVPQGSPEILEADLAPLALELAAAGVTEPSQLSWLNPPPPAALAEGRG
                     LLVQLGALDRSGRITPHGRELAELGTHPRLGQLLLAGREAGVASLAGQLVALLEERDV
                     LRAPDGTGDPDLQLRVDLVSGGGTPPVYHGMDVDRGRLHRVRQEARLWARQLHASRPS
                     RAPLSAAALLALAYPDRVGQRRAGQAGRFLLRNGLGAFTAAPALMLSDYIVAAELDGD
                     RRESRIWLAATLDQSELTALFGEQVEAEDVVEWAEPEGVLKAVRRRRLGAIVLEETAR
                     QNPDPRLVQQEVEALVRREGLAALSWSDGAQSLRERLAFLHRLSAQGGLPGTWPDVSD
                     QALVDGLEQWLGPALGSVRRRADLGRIDLTECLQQLVGW"
BASE COUNT          741 a         1622 c         1681 g          797 t
ORIGIN      
        1 ttcagccctt gcaacattct ccagcgtggt accggccggc cttgccgccc aggactacga
       61 ttccggcccg gtgcgggtct tcaccttcgg ccggccccgc attggcatcc gggtcgagac
      121 caaggccgac gccgagaagg acaagatcgg cgcgcgggtg gggtcggtga ccgaaggtgg
      181 cccggccgac aaggccggca tcaaggaggg tgacatcatc acccgcttca atggcgtggc
      241 cctcggcggc gccaagagcg aggatgagga tgacacctcg ggccccggcc tcaaactggt
      301 cgaactggcg cagaagctcg acgctgggga caccgtggac gtcgagtttc gccgcgggac
      361 cgagtcgaag aaggccaaga tcgtggcggc cgacatgggt gacttcgcca tgcgccgctt
      421 cgatgtggag accccgatgc ccagggggac gatgcggatg ccccggatgg agatccagcc
      481 tggccccgag ggtatgcgga tgttccaggg cggcccgggc gacattcgga tcttcaccaa
      541 tggccgcttc gagggtggcc tcgagctggc ggacctgaac gccgacctgg gtgagtactt
      601 cggggcgaag gagggggtgc tggtcctcaa ggcgcccgcc gattcgggca acccgctcaa
      661 ggccggcgat gtgatcgtct cgatcgatgg ccggcccacc aagtcggaag agcaggcccg
      721 ccggattctc aggtcgtacg gcgagggcga gacggcgaag ctcgaggtgc tgcggaagca
      781 gaagaagatg acgctgagct acaagccgga gcgcgagggg gagtggaaga tgcggatccc
      841 caagccgact cgccggccgg gagcggcgcc ggaacggacg tgagtagtag gaagtgagaa
      901 gtgagaagtg aagagtgaga tgtgcgatgt gagagcggca tcatcccctt ctcacttctc
      961 acttctcact tctcactacc cctcattcgc cggcttgtac cgcccgatga tgagcgtggt
     1021 attgtccgat ccgccccggt cgagcgccag ctgcaccaga tccctcgcgg tcttttccga
     1081 cgaatcgcag gccagcagcg catcccggat ctcgtcatcg ctcacatgct tggtgacccc
     1141 gtcggtgcag agcagcatga tgtcgttcaa ctggatatcg gtggtcaccg tcatcggctc
     1201 cgcgcgcatc gcgccgatgg cgctgtagag cacatgcttg aggcccgagc gctcggcctg
     1261 atcgggtgag agggcgccgg cgtcgaccat cgcctgcgcc atggtctggt ccttggtgag
     1321 cagattgagc tgcccgtccc tcagcacata gcagcggctg tcacccacat gcaccaggta
     1381 gccgcgcggc caccggatgc agaccatggt gagggtggtg gccattccca gccgctcgtc
     1441 gtccgccgct cccgccttac gcaccgcctc gtggctccgc tccaccgatc gctgcagctc
     1501 ggccaggaag gccggctcct gatcctggtc gagccggacg tacagatcca tcgcccgcag
     1561 cacgtagtcg atgatggcgc ccagcgcggt acggctggcg tccttcccac cgggaatccc
     1621 gccgactccg tccgccacca ggaacacata gccccggctg ggactgacca gctccccgag
     1681 ggtttcctcg ggaaggctgg tctgatgtac ctgcatggct ttgtggatgc tgccgatgag
     1741 gaaacagtcc tggttctcgg tgcgaacgag tccctgatga ctgatcccga agtagtcgta
     1801 ccggtccttg ccggggcggg ccggctgggg atcttctgga gcctgggtca cgggtctctg
     1861 cctccctgac ccgccaagct actgtggaat cagtggtgcc gcatcccccc gtggtcgtcg
     1921 tgccagacct cggccgggtc gctcgcaaag acgttgacgt gcaccatcca gttgaacatc
     1981 cgggtcttcc agtgaccatg ggcggcctgg caggcttcct cggtagtgat gctcccgcga
     2041 ggcccgaatt ggggatggcg tccgctcatc gccgcctcca tgtcgctgct cacaggcgga
     2101 aggcagagat tggtgtgctg atgccaccgg gcgatgctga gcggaatccg ctggtccagg
     2161 tcttcgagtg aggccgaggc cggggcggtg tacatcaccc cgatcaactc cagctttccg
     2221 tcagggccat cccggtagag cagtgacgtg ggcgccgccg ggtcgaaggt gaaccgcgcc
     2281 ttgagccccg ccacccggtt ggtgtagtgg tagaccttct gccgcttgac catcggcgcg
     2341 aaacgtttga aaccgtcagc ttcagccact gccacgtcgc ggtacttctc cgccgcggcc
     2401 cgcgcgatct ggacgatgct gtcggcccgt gcctggtcgc ccgaccggag cgggcgcatg
     2461 ggggtgaggg tgatgtgggg accgctcatc accatgtcct gcatctcccc ttcctgcgcc
     2521 actacgggcg tggcgaggag agggaacagg agtaccacat tcagccagcg tcgcatcggg
     2581 tcctcgaaag aagtcgtctt caggtagacg gcctcggccg cgtgacgtta acccggagcg
     2641 ctccgggacc actgtgcaga tatagttcac ccgtgccgat gccgaccctc ccgatcgagc
     2701 ctgtcctccc cgatctcgct gccgcgcttg ccgggccggg gcatgccgtg ctccaggccc
     2761 caccgggcgc cggcaagacc acgcgggcgc cgctttacct cctcgaccag ccctggctca
     2821 gtggaaaaaa gatcctggtc ctcgagcccc gccggctggc agcccgagcg gcggcccggc
     2881 gcatggcgca gatgctgggc gagcggcccg gtcagaccgt gggctaccgg gtccggcgtg
     2941 agagcctgac cggtccggcg actcgcatcg aagtcgtgac cgagggaatt ctcacccgca
     3001 tgctccaggg agaccccgcg ctggagcagg cggggctcgt gatcttcgac gaattccacg
     3061 agcggagcct tcacgccgat ctcggcctgg cattgactct ccagtcccgc gccgtgctcc
     3121 ggccggatct ccgggtcctc gtcatgtcgg ccaccctcga cggcgccgcc gttgccgcgc
     3181 tccttggtgg cgcgccggtg atcacctccg agggtcgcgc cttttcggtc gacacccgct
     3241 accggccgcg ccggcccgaa acccggctcg aaccagcggt agccgcggtg gtgcgcgaag
     3301 cactcgcggc ggacgagggt gacatcctgg tctttcttcc cggtgcaggg gagatccacc
     3361 gggccgggga gctgttgcgg gacgatgaaa gcggccgggt cgcggtgctg ccactccacg
     3421 ggacgatgtc ggccgaagag caggacgcgg cgattgcgcc cagtccgcca gggaggcgaa
     3481 aggtggtact cgcaacctcg attgcggaga ccagcctgac catcgaagga gtgcggatcg
     3541 tggtcgacgg cgggctggca cgggtgccga agttctcgcc ccgcaccggt atgacccgcc
     3601 tcgccacggt ccgggtctcg cgcgcctccg ccgaccagcg ccgcggccga gccgggcgta
     3661 ccgcaccggg tatctgctac cgcctctggg gccaggaaga ggatcatcac ctggtgcctc
     3721 agggttcgcc cgagattctc gaggccgatc tcgcgccgct cgcactcgag cttgctgccg
     3781 ccggcgtgac cgaaccttcc caactcagct ggctcaatcc acctccccct gcggcgctgg
     3841 ccgagggtcg gggactcctg gtgcagctgg gcgcgctcga ccggtcgggc cgcattacgc
     3901 cccacggtcg cgagctggcc gagcttggca cccatccgcg gctgggccag ctgctcctcg
     3961 ccgggcgcga agcgggagtg gcgtcgctcg cgggccagct ggtggctttg ctggaggaac
     4021 gcgacgtgct tcgcgcgccc gatggcaccg gcgaccccga tctccagctc cgggtcgacc
     4081 tggtatcggg tggaggaacg ccgccggtgt accacggcat ggatgtggac cggggacggc
     4141 tccaccgggt gcgccaggag gcaaggctct gggcccgtca gcttcacgcc agccggccgt
     4201 cccgcgcgcc gctctcggcc gcggcgctgc tggcgctggc ctatcccgat cgggtggggc
     4261 agcggcgggc ggggcaggcg ggacggtttc tgctccgtaa cggcctgggg gccttcaccg
     4321 ccgcgcccgc gctgatgctg agcgactaca tcgtcgctgc cgagctcgac ggcgaccggc
     4381 gggagagccg gatctggctc gccgccaccc tcgatcagtc ggagctgacg gcgctcttcg
     4441 gggaacaggt cgaagccgaa gacgtggtgg aatgggccga gccggaaggg gtgctcaagg
     4501 cggtccggcg ccggcggctt ggcgcgatcg tcctggagga gaccgcgcgg cagaaccccg
     4561 acccccggct ggttcagcag gaagtcgagg cactcgtccg ccgcgaaggt ctcgcggccc
     4621 tctcctggtc cgacggagcc cagtcgctcc gggaacggct ggccttcctg catcgtcttt
     4681 cggctcaggg tggtctgccg ggcacctggc cggatgtgag cgatcaggcc ctcgtcgatg
     4741 ggctggagca atggctgggt ccggcgctcg gctcggtgcg ccggcgggcc gacctgggcc
     4801 gcatcgatct caccgagtgt ctgcagcagc tggtggggtg g
//
LOCUS       DATIFF010000330         1692 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1275226, whole genome shotgun sequence.
ACCESSION   DATIFF010000330 DATIFF010000000
VERSION     DATIFF010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1275226"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..402)
                     /locus_tag="VLD58_04785"
     CDS             complement(<1..402)
                     /locus_tag="VLD58_04785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53644.1"
                     /translation="MRLLLLLLLPGVLHAQEFDFYARGPYRAQVPRPEAVLGYRIGTQ
                     QTMYYQQQTVLDRMMAAAPDRVRSEVIGRTAEGKVMRLLIISAPENLARLDEIRANLA
                     RLADPRRTTAAEARDLAERTPVTVLLTHSVHG"
     gene            complement(442..1299)
                     /locus_tag="VLD58_04790"
     CDS             complement(442..1299)
                     /locus_tag="VLD58_04790"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HSB53645.1"
                     /translation="MASALTFDALLTAIPFLLLLLVGLTHVARLSSGSTVQDLNQLFQ
                     RFVPQSAYDNGAGPFAGVEKFLVGFTKARGKISYVALPLFLWFSTRLFASIRTSLNLV
                     YDASRRPEGRHFLIWYLLGKLRDMMMVVLTLALFTVNGILSASLKVLSARGNQLTATV
                     PWLRFFVSGLGQVLTQVTTLIFSVSLFYIVYRHASPRRLPRGAALAAAVFTAGLFEIA
                     KLLYGWYIVHAAVNRFSVDASTGVAILFVLWIYYTALVFLVGAVVAETWDLRSRQRKA
                     SLEETQPAA"
     gene            1222..1383
                     /locus_tag="VLD58_04795"
     CDS             1222..1383
                     /locus_tag="VLD58_04795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53646.1"
                     /translation="MGEPHQQQQQEGNRGEERVEGERARQEGNVVAIGLMQGAAGEGQ
                     PTAQPLLEP"
     gene            complement(1386..>1692)
                     /locus_tag="VLD58_04800"
     CDS             complement(1386..>1692)
                     /locus_tag="VLD58_04800"
                     /inference="COORDINATES: protein motif:HMM:NF024143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HSB53647.1"
                     /translation="GTFRPLLVGALLGLAVGLLFAPQSGEETRRGLKRRLRKARALAE
                     EKVGEISERMSGEWPRERSRREESRDEVRSELERRLSEARARRRATATAGEDEEPVA"
BASE COUNT          300 a          543 c          616 g          233 t
ORIGIN      
        1 gccgtgtacc gagtgagtca gcaggacggt gaccggggtg cgctcggcga ggtcgcgcgc
       61 ctccgctgcg gtggtccggc gcggatcggc caggcgggcg aggttggccc ggatctcgtc
      121 gaggcgggcg aggttctccg gcgcggagat gatcaggagc cgcatcacct tcccttccgc
      181 ggtccggccg atcacctcgc tccggacccg gtcgggcgcc gcggccatca tgcggtccag
      241 caccgtctgc tgctggtagt acatggtctg ctgcgtgccg atgcgatacc ccagcaccgc
      301 ctcgggccgg ggcacctggg cccggtaggg accgcgggcg tagaaatcga actcctgggc
      361 atgcaggacc ccggggagga gcagcaggag gagaagacgc atggatggtc gtgaaagagg
      421 agaaggggga acgtacaacg atcaggcggc cggctgagtc tcttcgaggc tcgccttccg
      481 ctgacggctc cggagatccc aggtttcggc caccaccgcg cccaccagga agaccagcgc
      541 ggtgtaatag atccagagca cgaacagaat ggcgaccccg gtgctcgcat cgaccgagaa
      601 gcggttcacc gcggcatgca cgatgtacca gccgtagagg agcttggcga tttcgaacag
      661 gccggcggtg aagaccgcgg ccgccagtgc cgcgccccgg ggcaaccgtc tgggcgaggc
      721 gtggcgatag acgatgtaga agaggctcac cgagaagatc agcgtggtca cctgggtcag
      781 cacctggccc agccccgaga cgaagaaccg gagccagggg accgtggcgg tgagctggtt
      841 tccccgggcg ctcaagacct tgagcgatgc cgagaggatg ccgttcacgg tgaacagcgc
      901 cagggtcagc accaccatca tcatgtcgcg gagcttgccc agcaggtacc agatcaggaa
      961 atgtcggcct tcaggacgcc gggacgcatc gtacaccagg ttgagcgagg tgcggatcga
     1021 ggcgaagagc cgggtgctga accagaggaa gagcggcagc gcgacgtacg agatcttgcc
     1081 gcgggccttg gtgaagccga ccaggaattt ctcgaccccc gcaaagggac cggcgccgtt
     1141 gtcgtaggcg ctctggggca cgaaacgctg gaacagctgg ttgaggtcct gcaccgtgga
     1201 cccggaagag agccgggcca cgtgggtgag ccccaccagc agcagcagca ggaagggaat
     1261 cgcggtgagg agcgcgtcga aggtgagcgc gctcgccagg aagggaatgt tgtggcgatc
     1321 ggcctgatgc agggtgcggc gggcgaaggc cagcccaccg cgcagccgct cctcgagcca
     1381 tgatgtcagg cgacgggctc ctcgtcctca ccggcggtcg cggtggcgcg gcgccgggcc
     1441 cgggcctcgg aaagccggcg ctcgagttcg ctccggacct cgtcgcggct ctcttcccgg
     1501 cggctccgtt cccggggcca ttcgcccgac atccgctccg agatctcgcc caccttctcc
     1561 tcggccaggg cgcgggcctt gcgcagccgg cgcttgaggc cccggcgggt ctcctcaccg
     1621 ctctgggggg caaacagcag tccgaccgcc agcccgagca gggctcccac cagcagggga
     1681 cggaaggttc cc
//
LOCUS       DATIFF010000331         4664 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1736199, whole genome shotgun sequence.
ACCESSION   DATIFF010000331 DATIFF010000000
VERSION     DATIFF010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4664
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1736199"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(80..1093)
                     /locus_tag="VLD58_04805"
     CDS             complement(80..1093)
                     /locus_tag="VLD58_04805"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     exonuclease"
                     /protein_id="HSB53648.1"
                     /translation="MSLLELTPAGLYCAAGDFFIDPWQPVARAIVTHAHGDHLRPGSA
                     AYLVAAPGEALARARLPFDASLRSVPYGEAHVLNGVRVSLHPAGHVLGSAQVRIEHQG
                     EVWVVSGDYKLEPDSTCAPFEPVRCHGFVTECTFGLPIYRWAPQAELFAELNAWWRGN
                     QERGRATILLGYALGKAQRLLAGLDPAIGPICTHGAMDRMTSLYREAGVALPTTAPVS
                     GFPGKHDWSGSLILAPPGSEVTPWARRFGDAATGFASGWMQVRGNRRRQALDRGFALS
                     DHVDWPSLLQAIEATGATTVWATHGFTAPLVRYLQEQGLDARALATRFEGELEASDEV
                     LES"
     gene            1318..1659
                     /locus_tag="VLD58_04810"
     CDS             1318..1659
                     /locus_tag="VLD58_04810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53649.1"
                     /translation="MKFMLVLAVLIGVGWYYFKPLPPGKGPAAAKAMKVANSVASALE
                     SYRGARGGYPVTLQDMVPEFLGSVPHMTHGSNLEYERLGMNYKLSFGYANPLPVHCSM
                     QAGTKWACEWF"
     gene            complement(1749..4511)
                     /locus_tag="VLD58_04815"
     CDS             complement(1749..4511)
                     /locus_tag="VLD58_04815"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HSB53650.1"
                     /translation="MRRLLAGFMLLAGATAPAVAQSVGAVTGTVREAGAEGVGLTGAL
                     VTVDGGRHAVVTDQRGVFRLREIPAGWHSIKAAAIGHRPLVRDSVLVRAGQTTALDFV
                     LRPDPVGLAPLEVVAERVDSVLDPLAVQDQQRFTAEDLRRLPVSSVEEAIALSSGAVG
                     ESYRGGRLGQQAFILDGLGLKNQLDASTGSLGVRVPPDALAEASLVTNGFSARYGQAV
                     SALVNLATRDGGDRWRGRMAYETDRPLGDGGDFGLDRAVISADGPLPGGLRFLGVVDV
                     SGKLDAEPVNAPTPSNPRDPRHDQPWLLPHNSGETGDAAAKLTIPLGNRFIFRLFGIH
                     SAEQRLLFDPIYKYDQEFAPVRRVTGNLLNGHLQSTFGSSVIADLRIGYFGREFIRGT
                     PTEAPDYAFGAFTGKSIGILGEKVAKSLDTVVANQPIAGFNQPEFSTNTPWGVPAYFR
                     TGAGRGDLAWNRFRELRTRLDLSIVGGANTDIYVGGEYSTQQVRTFQRTFGYLPTGGD
                     VPATSTSAFAPWAGSLYSEAQARSNDLALTVGIRYDQFSGRNDLPGRKNSSTQRGLSP
                     RIAVSTTFRGATFVASFGKFRQAPDYQYLVDAAFDDTTRTGRTRQGNPDLGFEESTQY
                     EFSIRLRPTPSTSIRGNLYVRRLDGLVASVPLGVNPDSSIFGNADAGSVKGFEVVFER
                     EFRGGFGARVSYNLQDATATSSDAFFVRRAGSIDPNTGQLVFPAKVEFPLDFDRRHSL
                     TAILTGTVPESFGPRVAGSSVVGGIEGTLILRVASGLPFSKYIGDSLVGLPNDGRLPA
                     TNTVDLLVRRPFRLKGMEGSLYLDMRNVLNRRNIIAVRRDTGTPVLDETQLQQLAQAS
                     FNANPTPIPYESPRYRAWADQDQNGYVEGQELQNLYLAATRDFVQPIFFYGAPRLIRL
                     GVEVGF"
BASE COUNT          742 a         1505 c         1697 g          720 t
ORIGIN      
        1 gagaccagcg cggcgacctt gtctccggtg gcgttgctcg agtcgagttc gtgatagagt
       61 cgggcgaagc ggcgcaggct catgactcca gcacctcgtc gctggcctcg agctcgcctt
      121 cgaagcgggt ggcgagcgcg cgggcatcga gcccctgctc ctggaggtag cggaccagcg
      181 gggcggtgaa tccgtgcgtc gcccagaccg tggtggcgcc cgtcgcctcg atggcctgga
      241 gcaggctggg ccagtccaca tgatccgaga gggcgaagcc acggtcgagg gcctggcgcc
      301 ggcgattgcc ccgcacctgc atccaacccg aggcgaagcc agtggccgcg tcgccgaatc
      361 ggcgggccca gggtgtgacc tcggagccgg gcggggcgag gatgagtgaa cccgaccagt
      421 cgtgcttgcc cgggaagccc gagaccggcg ccgttgttgg gagcgccact ccggcttccc
      481 ggtacagcga ggtcatccgg tccattgcgc cgtgggtaca gatcggcccg atcgcggggt
      541 ccagccccgc gaggagccgc tgcgccttgc cgagggcgta gccgagcagg atcgtggcgc
      601 gcccgcgctc ctgattgccg cgccaccagg cgttgagttc ggcgaacagt tcggcctgcg
      661 gggcccagcg gtagatcgga agtccgaagg tgcactcggt gacgaagccg tggcagcgca
      721 ccggctcgaa gggggcgcag gtcgagtcgg gctcgagctt gtagtcgccg ctgacgaccc
      781 agacctcgcc ctggtgctcg atgcggacct gggccgagcc gaggacgtgg ccggcggggt
      841 gaagagagac gcggaccccg ttgaggacgt gggcctcgcc gtagggaacg cttcgcagcg
      901 aagcatcgaa gggaaggcgg gcgcgggcga gcgcttcgcc gggcgcagcg acgagatagg
      961 ccgccgatcc ggggcggaga tggtcgccgt gcgcgtgggt aacgatggcg cgggcgactg
     1021 gctgccaggg atcgatgaag aaatccccag cggcgcagta gagaccggcg ggggtgagtt
     1081 ccagcaggct catcggggag acgggcggcg gtggcgctta agacacgatg gctccggcaa
     1141 ggtagcgagg tcccgcgatc tacgtcggcc ggtggagaac ccggcgccat cctgtgcctc
     1201 ggccggtcgc cctaatgggt tgcgcgacaa gcagttgagg ggcgggatcc gactgcgccg
     1261 gaaccgggca cccgacttgc ttcctctggt ggatccacgt atttggccgg gggtccgatg
     1321 aagttcatgc ttgtgctggc agtgctgatc ggggtcgggt ggtactactt caagccgctc
     1381 ccgccgggaa agggtcccgc ggcggccaag gccatgaagg tcgcgaactc ggtggccagt
     1441 gccctcgaat cataccgcgg cgcccggggc gggtatcccg tcacgctgca ggacatggtg
     1501 ccggagttcc tgggctcggt gccgcacatg acccatggca gcaatctcga gtacgagcgg
     1561 ctcggcatga actacaagct ttcgttcggc tacgccaatc ccctgccggt gcactgctcg
     1621 atgcaggccg ggacgaagtg ggcgtgtgag tggttctgag gggccggagg ccggaggcag
     1681 gaggccggcg caggcaggag ctccgccgcc taacaatctc cggcctccgc ccgcctcccg
     1741 ccttcgttct agaaccccac ctccaccccc agcctgatca gccgcggcgc cccgtagaag
     1801 aagatcggct gcacgaagtc ccgggtggcc gcgagataca gattctgcag ttcctgccct
     1861 tcgacatacc cgttctgatc ctggtccgcc cacgcccgat agcggggcga ttcataaggg
     1921 atcggtgtcg ggttggcgtt gaacgaggct tgggccagct gctggagttg cgtctcgtcg
     1981 agcaccggtg tgccggtgtc acgccgcacc gcgatgatgt tgcggcgatt gagcacgttc
     2041 cgcatgtcca ggtagagcga gccctccatc cccttgagcc ggaaggggcg ccgcaccagc
     2101 aggtcgacgg tgttggtcgc ggggagccgc ccgtcgttgg gcagcccgac cagcgagtcg
     2161 ccgatgtact tcgagaaggg aagccccgat gccacccgca gaatcagggt tccttctatc
     2221 ccacccacta cgctggagcc tgccacccgc ggtccgaacg attccggcac ggtcccggtc
     2281 aggatggccg tcagggagtg gcgccggtcg aagtcgaggg ggaactccac cttggccggg
     2341 aagacgagct gcccggtgtt gggatcgatc gatcccgccc ggcgcacgaa gaatgcgtcg
     2401 gacgaggtag cggtggcgtc ctggagattg taactcaccc gcgcgccgaa accgccccgg
     2461 aactcccgct cgaagaccac ctcgaagccc ttcaccgagc cggcatcggc gttgccgaag
     2521 atgctggaat cgggattcac ccccagcggc accgacgcga ccaggccgtc cagccggcgc
     2581 acgtagagat ttccgcggat gctggtgctg ggagtgggcc ggagccggat gctgaactcg
     2641 tactgggtcg actcttcgaa gccgagatcg gggttgccct ggcgggtgcg gccggtgcgg
     2701 gtggtgtcgt cgaacgcggc gtctaccaga tactgatagt caggcgcctg gcggaacttg
     2761 ccgaagctgg ccacgaaggt ggcgccgcgg aacgtggtgc tcaccgcgat gcgggggctc
     2821 aggccccgtt gcgtgctcga gttcttcctg ccggggagat cgttgcggcc gctgaactgg
     2881 tcgtagcgga tcccgaccgt gagggcgaga tcgttggacc gggcctgcgc ctcggagtag
     2941 agcgagcctg cccagggagc aaaggcggag gtgctggtgg ccggcacgtc gccgccggtg
     3001 gggagatacc cgaaggtcct ctggaaggtg cgcacctgct gggtggagta ctcgccaccg
     3061 acgtagatgt ccgtgttggc cccgcccacg atgctgaggt cgagccgggt gcggagctcg
     3121 cggaagcggt tccaggccag atcgccgcgg ccggctccgg tacggaagta ggccggcacg
     3181 ccccacgggg tgttggtgct gaactccggc tggttgaagc cggcgatcgg ttgattggca
     3241 accacggtgt ccaggctctt ggccaccttc tcgcccagga tgccgatcga cttgccggtg
     3301 aacgcgccga aggcgtagtc cggtgcctcc gtcggagttc cgcgaatgaa ctcccgtccg
     3361 aagtagccga tccggagatc ggcgatgacg ctgctgccga aggtgctctg gagatggccg
     3421 ttgagcaggt tcccggtcac ccgccgcacc ggggcgaatt cctggtcgta cttgtagatc
     3481 gggtcgaaca ggagccgctg ctcggcggag tgaatgccga agagccggaa gatgaagcgg
     3541 ttcccgagcg ggatcgtcag cttggccgcg gcgtcgccgg tctccccgct gttgtggggc
     3601 aggagccagg gctgatcgtg ccggggatcg cggggattcg acggggtggg ggcattcacc
     3661 ggttccgcgt cgagcttgcc ggacacatcc accacgccga gaaaacggag gccgcccggg
     3721 agagggccgt cggccgagat caccgcccgg tcgaggccga agtcgccgcc gtcaccgagc
     3781 gggcggtcgg tttcgtacgc catccggccc cgccagcggt cacctccatc ccgggtcgcg
     3841 agattcacca gcgcggacac cgcctggccg taccgggcgg aaaatccgtt ggtgaccagc
     3901 gaagcctcgg ccagcgcgtc gggcggaacc cgcaccccca gcgacccggt cgaggcgtcg
     3961 agctgattct tgaggccgag gccgtcgagg atgaaggcct gctgtcccaa ccggccgccg
     4021 cggtagctct cgccgacggc gcccgaagag agtgcgatcg cctcctccac gctcgacacc
     4081 gggagccggc ggagatcctc ggcggtgaag cgctgctggt cctgcaccgc gagcggatcg
     4141 agcaccgagt ccacccgctc cgccaccacc tcgagcggcg ccagcccgac gggatcgggc
     4201 cggagcacga aatcgagggc ggtggtctgg ccggcgcgca ccagtacgct gtcgcgcacg
     4261 agtggtcgat ggccgatggc cgccgccttg atggagtgcc atccggcggg gatctcgcgg
     4321 aggcggaaca ccccgcgctg atcggtgacg accgcgtggc gcccgccgtc gaccgtgacg
     4381 agcgccccgg tgagtcccac tccttcggcg ccggcttccc gcaccgtgcc ggtcactgcg
     4441 cccaccgatt gggccaccgc gggcgccgtg gcgccggcca gcagcatgaa ccctgcgagc
     4501 agtcgtcgca ccctattcct cccagaccca gacatcgttg atcaacgtga cagtggtatc
     4561 gatgacaaag gtttccgggg ctacctcgac ggtgaagatc tcgtaggggt agccttcggc
     4621 gaccagccgg ccgccgctcg gtgcaaagcg cgggtgtttg tacc
//
LOCUS       DATIFF010000332         1238 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1582529, whole genome shotgun sequence.
ACCESSION   DATIFF010000332 DATIFF010000000
VERSION     DATIFF010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1238
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1582529"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(475..1116)
                     /locus_tag="VLD58_04820"
     CDS             complement(475..1116)
                     /locus_tag="VLD58_04820"
                     /inference="COORDINATES: protein motif:HMM:NF023410.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EpsI family protein"
                     /protein_id="HSB53651.1"
                     /translation="MTSHSRWWPVGILAAGVLLLLGMGPGRIAPRELREPLATIPREY
                     FGYRADQDIQVSDDERRVAGMDQYISRSYAKSDRDFFTVYVGYYERQSSGKSIHSPKN
                     CLPGGGWEPLQSRIAELPSPIGSVPVNEYLIAKGAAQALVLYWYQGRGRVVASEYRVK
                     VNLLYDAAFRRRTDEALVRVVVPIVDGKVEPARELARRVAGELAPVVAGHLPA"
BASE COUNT          199 a          450 c          399 g          190 t
ORIGIN      
        1 atggttccgc aatggtgcgg gattccgtca ctttcttgac agcccgggcg ttgcagacgc
       61 cccgcagggc cgttcccaca ttagggcccg gtcagccaca ccccgtctgg aagctcgagg
      121 gcccggcaac ctgccgggcc ctcgtcgagt catcctggtc cttcgaccgc cctcagtcca
      181 ggggcgcggg ggccggcggc gggacaacgt tcgagacagt agtggccttg gtcagctccg
      241 tcaggcccac ctcgaacctc aacgtcggcg ccgcaaaggg cttcctcatt cctgcctccg
      301 gtaggggatt gactggggat tcggccggct cacgcaagcc gcctgccagc atcgaatcga
      361 tcggtgcttc tgcctaactt gtggccccgg cgctacttcg tgaggacact cgacggccgc
      421 tcgggagccc ggcggctccg gcgtggtgac catcccgcag gccggccacc acaatcaggc
      481 gggcagatgc cccgcgacga ccggcgccag ctcccccgcg acccggcgcg ccagctccct
      541 cgccggctcg accttcccat ccacgatcgg cacgacgacg cggaccagcg cctcgtcggt
      601 ccggcgccgg aaggcggcgt cgtagaggag attgaccttg acccgatact cgctggccac
      661 gacacggcct cgtccctggt accagtagag gacgagcgcc tgcgcggcgc ccttcgcgat
      721 gaggtattcg ttcaccggca cggatccgat cggcgagggg agctcggcga tccgggactg
      781 cagtggttcc cagccgccgc ccgggaggca gttcttcggg gagtggatgg acttgcccga
      841 gctctgccgc tcgtaatagc ccacatagac cgtgaaaaaa tcccgatccg acttcgcata
      901 gctccggctg atgtactgat ccatccccgc aacccggcgt tcgtcgtcgg agacctggat
      961 gtcctggtcc gcgcggtagc cgaagtactc gcgcggaatc gtggcgagcg gctcgcgcag
     1021 ctcgcgcggc gcgatgcgcc cgggacccat tcccagcagg agcagcaccc cggcggcgag
     1081 gatgccgacc ggccaccatc gggagtggga ggtcatgccg cgctccggcc aaccagccgc
     1141 cgctcaaccg cgccgaacgc catccccacg agtcccagga tgcccagggc gacggtgaag
     1201 atgagccacc cctcgctcag gtgcatgaag cccttgcc
//
LOCUS       DATIFF010000333         6185 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_199277, whole genome shotgun sequence.
ACCESSION   DATIFF010000333 DATIFF010000000
VERSION     DATIFF010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6185
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199277"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(116..625)
                     /locus_tag="VLD58_04825"
     CDS             complement(116..625)
                     /locus_tag="VLD58_04825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53652.1"
                     /translation="MKLHSSVVTGLSLLALAACHKGKAPEAPRPAPSLLVEMRAVGDE
                     AFVLADNAPIFTDSTTRLIRDTVDWKDVWTQAMSRRQANARLALPAVDFSKEMVVLAA
                     AGRMKPGDVVHIDSVGTRKDLTVVVLRYTVGCQDLRMTAYPFEMARIPRATGEVTWRE
                     HRYKAPECQ"
     gene            complement(660..4103)
                     /locus_tag="VLD58_04830"
     CDS             complement(660..4103)
                     /locus_tag="VLD58_04830"
                     /inference="COORDINATES: protein motif:HMM:NF018470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ImcF-related family protein"
                     /protein_id="HSB53653.1"
                     /translation="MKARLKVWLVGTIALLIWVLVVWLVINFLGLSGREYKLVATFLI
                     TLGVSAICAVIWYFLNQQKAKEGPKEGPVDEIDKDISAARNRLAAAKLSDKTRLSQLP
                     LILCLGPTDSAKTSILIRSGLDPDLLTGEVQRGDAVVATRGVNLWYSNKTILMEAGGR
                     LVADSGRFSRLIRYIQPSRTSAVLTSGRQAPRVAIVTLSIEDLLRPGGGEQVATHARE
                     LRQRLLETSKKLGIRLPVYVVFTKADKIPYFAEFVRNFSSDEAKEVLGATLPWDSGPA
                     GTYADRTASRIGSAMQRLAASLASHRLQFLPRETQPALIYGSYEFAREFRKLVPQATQ
                     FLVDLCKPSQLEVSPVLRGFYFTGVRAVVVEESGGMAPQPQQRQAQLAMDATQAFVPS
                     MYGVQQAPAGPVGPVSRKIPQWMFLGRFFKDVIFKDRVALAATAGGARVNLLRRVVLA
                     TAAGLAVFYTLMLIISFAGNRRLKNRVEAAIRNVSADALPAGDLATVETLRRLDTLRM
                     VNEQLGTWNREGAPIGYRWGLYSGNSLFRQSNRVYFARFDSLMYSATFNRILENMRNF
                     PVTRTDSTDYEWTYNQLKAHLITTDYPEKSTPEFLEPVLLDAWKQGHEIPSDEKIRLA
                     RAQFAYFAGELARGNNMLPSPPDSLLMRKSRELLRQFKDGEQIYQIMQTEAGKAGAKP
                     FDFDRTFGNQVLSAPHVVPAAFTRKGWTYMWGSAFKNPDQYFQGEEWVLGQEKLSENQ
                     RYEVVNKIKAKYRDEYARHWRQLLADARIAQFGSLQDAARKVKLLGSNPSPLMQLINA
                     VSLNTSVDSIFAATTFQPALTVSPADSARLISDASAPYVKAVQSLATALDAVASAAPA
                     DRAGPAEQAKNAVTEAKNAASSLGIAFATGPNSVGPDITRLLNSGFSSIDGMLGGVGV
                     AGINKAGADFCGTFGKVLTKSPVSPNGPAASIDEVTAFFGRPDGALWNLYNTQLARLL
                     SRTGSSYAPTPGSSVRVNPRFVQFFSRAAQFSRALYPEGADQVPRMGFSFRAIINSDV
                     TLVKLVVDGNNRTYSATRTGDQPFTWIGETAQETRLEATIRGNTQTRIKSGTWSLFQL
                     FADARNWRQNGLKYTAEWSFQHEAQTIPVQFELTLPDAAPILNPEWLRGMSCVSAIAG
                     Q"
     gene            complement(4111..4845)
                     /locus_tag="VLD58_04835"
     CDS             complement(4111..4845)
                     /locus_tag="VLD58_04835"
                     /inference="COORDINATES: protein motif:HMM:TIGR03349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DotU family type IV/VI secretion system protein"
                     /protein_id="HSB53654.1"
                     /translation="MSSPAAAQADLQAEPARRRGTLALVLQEAITAIVRLRANRQTAA
                     DAESFRAHLKQLLATADDQARRSGYDQGSVKRAIYAVTVFLDESVLNSSQPMFADWPR
                     KPLQEEIFGGHMGGEVFFQNLRELLGRPDSEDLADLLEVHQLCMLLGFKGRYTLGDTG
                     ELRSFMAQTAEKIQRIRGGHGPLGPQWAPLAGESLPVTVDPWLNRLVMGAGISACVAL
                     LFLIVFTLVLRSGVSDIAELAKSLAP"
     gene            complement(5057..>6185)
                     /gene="tssK"
                     /locus_tag="VLD58_04840"
     CDS             complement(5057..>6185)
                     /gene="tssK"
                     /locus_tag="VLD58_04840"
                     /inference="COORDINATES: protein motif:HMM:NF017723.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssK"
                     /protein_id="HSB53655.1"
                     /translation="PEGDPAPTPLEIRELFSPTADSHLVHLVIPPYRPGMPNCAVDGD
                     LEAPTRRFIAATTFIRDETTGRDEQEVSLGRKNFRLALDPLPEGMITMPMARIRRDGT
                     GAFIYDPAYVPPCLQIGASTQLMALVARMVEMLDAKSDSMLQDRRADRKGVAEYATHE
                     VASFWLAHTIHASLGPLRYHRDTRAAHPEQLYVELARLGGALCTFALDAHPRTVPGYD
                     HDRLGDCFLALERHIRAHLEVILPSSYLAVPLARQADYLYAAPINDQRAFGPSRWILG
                     LRAAMGESEIISRAPALVKICSQKHILRLVKEAYAGLTLEHIPSPPAGIAPRVDTQYF
                     MVSRSGPCWEAIQKTKEIGIYVPEAFRNVELDLRILLQGQG"
BASE COUNT          955 a         2002 c         2193 g         1035 t
ORIGIN      
        1 ttagccgtta gccgttagcc gttagcatgc ccgctgcggc cctggcaccc gttgccctga
       61 ctgtgcccga ctctgaaaca gctaatggct aatggctaac ggctattggc gccgctcact
      121 gacactccgg cgccttgtac cggtgctccc gccaggtcac ctcaccggtg gcccgcggaa
      181 tccgcgccat ctcgaaggga taggcggtca tgcgcaggtc ctggcagccg acggtgtagc
      241 gcagcaccac cacggtgaga tccttccggg tcccgacgct gtcgatgtgc accacgtcac
      301 ccggcttcat ccgtccggcc gcggcgagca ccaccatctc cttgctgaag tcgacggccg
      361 ggagcgcgag gcgggcgttg gcctgccgcc ggctcatcgc ctgggtccag acatccttcc
      421 agtcgaccgt gtcgcggatg aggcgggtgg tgctgtcggt gaagatcggg gcgttgtcgg
      481 ccagcacgaa cgcctcgtcc ccgacagccc gcatttccac cagcagcgag ggcgcggggc
      541 ggggcgcctc gggcgccttg cccttgtggc aggcggcgag ggcgagcagg gacagaccgg
      601 tcaccaccga cgaatgcagt ttcatgacag gctccagctg acgaaggaat aggcccggat
      661 cattggccgg cgatggcgct cacgcagctc atgccgcgga gccattcggg gttaagtatc
      721 ggggccgcat cgggcaaggt caactcgaac tgcaccggga tcgtctgcgc ctcgtgctgg
      781 aagctccact cggcggtgta cttgaggccg ttctgcctcc agttgcgcgc gtcggcgaag
      841 agctggaaga gcgaccaggt gcccgacttg atgcgggtct gggtgttgcc gcggatggtg
      901 gcctcgagcc gggtttcctg ggccgtctcg ccgatccagg tgaagggctg gtcgccggtg
      961 cgggtggcgc tgtaggtgcg gttgttgcca tcgaccacca gcttcaccag ggtcacgtcg
     1021 ctgttgatga ttgcccggaa gctgaagccc atgcgcggca cctggtcggc gccctcgggg
     1081 tagagggccc gggagaactg ggccgcccgg ctgaagaact gcacgaagcg gggattcacc
     1141 ctcacgctgg atcccggcgt gggcgcgtaa ctcgagccgg tgcgggaaag cagccgcgcg
     1201 agctgggtgt tgtagagatt ccagagcgcc ccgtcgggcc ggccgaagaa ggcggtgacc
     1261 tcgtcgatgc tcgcggccgg gccattggga ctcaccggcg acttggtcag caccttgccg
     1321 aaggtcccgc agaaatcggc gcccgccttg ttgatgcccg cgacgcccac accgcccagc
     1381 attccgtcga tcgacgagaa ccccgagttg agcagccggg tgatgtcggg ccccacgctg
     1441 ttgggcccgg tggcgaacgc gatccccagg ctgctggcgg cgttcttcgc ctcggtcacc
     1501 gcgttcttgg cctgctcggc cggccccgcg cggtccgccg gcgccgccga cgccacggcg
     1561 tcgagcgccg tggcgagcga ctgcaccgcc ttcacgtagg gggcgctggc gtcgctgatg
     1621 agccgggccg agtcggcggg tgagaccgtg agcgcgggct ggaaggtggt ggcggcgaag
     1681 atcgagtcca ccgaggtgtt gagcgagacg gcattgatca gctgcatcag cggcgacggg
     1741 ttgctgccga gcagcttcac cttgcgggcc gcgtcctgga ggctgccgaa ctgcgcgatg
     1801 cgggcatcgg cgaggagctg gcgccagtgc cgggcgtatt cgtcgcggta cttcgccttg
     1861 atcttgttga ccacctcgta gcgctggttt tcgctcagct tctcctgccc cagcacccac
     1921 tcctcgccct ggaaatactg gtcggggttc ttgaacgccg agccccacat gtaggtccag
     1981 cccttccggg tgaaggcggc gggcaccacg tgcggcgcgc tcaacacctg gttgccgaag
     2041 gtccggtcga aatcgaacgg cttggccccg gccttccccg cctcggtctg catgatctga
     2101 tagatctgct ccccatcctt gaactggcgg agcagctccc gcgacttccg catcagcagg
     2161 ctgtcgggcg gcgaggggag catgttgttc ccccgcgcca gctcgcccgc gaaataggcg
     2221 aactgcgccc gggccagccg gatcttctcg tcgctcggga tctcgtgccc ctgcttccac
     2281 gcatccagca gcaccggctc gagaaactcg ggggtgctct tctcgggata gtcggtggtg
     2341 atcaggtggg ccttgagctg attgtaggtc cactcgtagt cggtggagtc ggtccgggtc
     2401 accgggaagt tccgcatgtt ctccaggatc cggttgaacg tcgcgctgta catcaggctg
     2461 tcgaagcgcg cgaagtagac ccggttcgac tggcggaaga gcgagttgcc gctatagagc
     2521 ccccagcggt agccgatggg cgcgccctcg cggttccagg tgccgagctg ctcgttcacc
     2581 atccgcagcg tgtcgaggcg ccgcagggtc tcgaccgtgg cgaggtcgcc ggccggcagc
     2641 gcgtcggccg agacattccg gatcgccgcc tccacccggt tcttgagccg ccggttgccg
     2701 gcgaaggaga tgatcagcat cagggtgtag aacaccgcga gccccgcggc ggtggcgagc
     2761 accacccggc ggagcaggtt caccctggcg ccgcccgccg tggcggcgag ggccacccgg
     2821 tccttgaaga tcacgtcctt gaagaaccgg cccaggaaca tccactgggg aatcttgcgg
     2881 gagaccggac ccaccggccc ggccggcgcc tgctgtaccc cgtacatcga cggcacgaag
     2941 gcctgggtcg cgtccatggc gagctgggcc tggcgctgct gcggttgggg cgccattccg
     3001 cccgactctt cgactacgac cgcgcgcacc ccggtgaagt agaagccccg gagcaccggg
     3061 cttacttcca gctggctcgg cttgcagagg tcgaccagga actgggtcgc ctgcggcacc
     3121 agtttgcgga actcgcgggc gaactcataa ctgccgtaga tcagggcggg ctgggtctca
     3181 cgcggcagga actggagccg gtgcgacgcc agcgaggccg ccagccgctg catcgccgag
     3241 ccgatgcggc tcgcggtgcg gtcggcatag gtgccggccg gcccgctgtc ccagggaagg
     3301 gtggcgccca gtacttcctt ggcctcgtcg ctggagaagt tgcggacgaa ctcggcgaag
     3361 taggggatct tgtcggcctt ggtgaacacc acgtacaccg ggagccggat gccgagcttc
     3421 ttcgaggtct cgagcagccg ctggcggagt tcccgggcgt gggtcgccac ctgctcgccc
     3481 ccgccgggcc gcagcaggtc ttcgatgctc agcgtgacga tcgccactcg cggcgcctgc
     3541 cgccctgagg tgagcaccgc gctggtacgg cttggctgga tgtagcggat cagccgggag
     3601 aagcggcccg aatcggccac cagccgcccg cccgcttcca tgaggatggt cttgttgctg
     3661 taccagagat tcacgccccg cgtcgcgacc accgcgtcgc cccgctgcac ctcgccggtg
     3721 aggagatcgg ggtcgaggcc cgagcggatg aggatcgagg tcttggcgct gtcggtgggc
     3781 ccgagacaga ggatcagggg cagctgggag agcctggtct tgtcgctcag cttggcggcg
     3841 gccagccggt tgcgcgccgc gctgatgtcc ttgtcgatct cgtcgaccgg cccctccttg
     3901 gggccttcct tggccttctg ctggttcagg aagtaccaga tcactgcgca gatcgcgctg
     3961 acgcccaggg tgatcaggaa ggtggcgacc agcttgtatt cccggcccga gaggcccagg
     4021 aaattgatca ccagccagac aaccaggacc cagatcagca gcgcaatggt gccgaccagc
     4081 cagaccttga ggcgcgcttt catggcgagg tcacggggcg agcgacttgg cgagctcggc
     4141 gatgtcggac acgcccgagc ggagcaccag ggtgaacacg atcaggaaga gcagggccac
     4201 gcaggcgctg attccggcgc ccatcaccag gcggttgagc cagggatcga ccgtcaccgg
     4261 cagggattcg cccgccagcg gcgcccactg cgggcccagc gggccgtgtc cgccgcggat
     4321 gcgctgaatc ttctcggcgg tctgggccat gaacgagcgc agctcgccgg tgtcgcccag
     4381 ggtgtagcgg cccttgaagc cgagcagcat gcagagctgg tgaacctcga gcaggtcggc
     4441 gagatcctcg gagtcgggcc ggcccagcag ctcgcgcagg ttctggaaga acacctcgcc
     4501 gcccatgtgg ccgccgaaga tttcctcctg gagcggcttg cggggccagt cggcgaacat
     4561 cggctggctc gagttgagca ccgattcgtc gaggaaaacc gtgacggcgt agatggcgcg
     4621 cttcaccgag ccctggtcgt acccggagcg gcgggcctga tcgtcggcgg tggcgaggag
     4681 ctgcttgaga tgagcacgga acgactcggc gtcggcggcg gtctggcggt tggcgcgcag
     4741 ccggacaatg gccgtgatcg cctcctggag caccagggcc agcgtgccgc gacgtcgagc
     4801 aggttcggcc tggaggtccg cctgggcggc ggcggggctg ctcatgagtt cagggccatg
     4861 tcgtttggga ctttgaactt actgaattct ggagatcggg ggaacggctg ggccggtggc
     4921 cggtggccgg aggcaggcgg aggcaggtga tgggaacggt tcggaagcaa cgagggatct
     4981 ccgagcgcgc attggagatc cctctcctcc actaccatct tcctcctgcc tccgccggcc
     5041 tcccgcctcc ggccctctag ccctgtccct gcagcagaat cctcaaatcc agctccacgt
     5101 tccggaacgc ttccggcacg tagatcccga tctccttggt cttctggatc gcttcccagc
     5161 agggaccgga gcggctcacc atgaagtact gcgtgtccac ccggggcgcg atgccggccg
     5221 gcggggacgg gatgtgctcc agcgtgaggc cggcgtacgc ttccttcacc agccggagga
     5281 tgtgcttctg ggagcagatc ttcaccagcg cgggcgccct ggagatgatc tcgctctcgc
     5341 ccatcgcggc cctgagcccg agaatccagc gggagggtcc gaaggcccgc tggtcattga
     5401 tcggagcggc gtagaggtag tcggcctgcc gggccagggg gaccgcgagg tacgacgacg
     5461 ggaggatgac ctcgaggtgg gcccggatgt ggcgttcgag cgccaggaaa caatcaccca
     5521 gccggtcgtg atcgtagcct ggtacggtcc gcgggtgagc gtcgagcgcg aaggtgcaga
     5581 gcgcgccacc cagacgggcc agttcgacgt agagctgctc ggggtgggcc gcgcgggtgt
     5641 cacggtgata ccggagtggc ccgaggctcg catgtatggt atgggcgagc cagaagctgg
     5701 cgacctcgtg ggtggcgtac tccgccacgc ccttccggtc ggcccgccgg tcctggagca
     5761 tcgagtcgct cttggcatcc agcatttcca ccatgcgggc caccagggcc atcagctggg
     5821 tgctggcgcc gatctggaga cagggcggta cgtaggcggg atcatagatg aaagcgccgg
     5881 tgccatcacg gcggatccgt gccatgggca tcgtgatcat gccctcgggc agaggatcga
     5941 gcgccagccg gaagttcttc cggcccaggc tcacttcctg ctcatcccgt ccggtcgtct
     6001 cgtcccggat gaaggtggtg gccgcgatga accgccgggt cggcgcctcg aggtccccgt
     6061 cgacggcgca attcggcatg cccggcctat agggcgggat gacgaggtga accaggtgac
     6121 tgtcggcagt cggggagaac agctcgcgga tctcgagggg cgtgggcgcc ggatcgccct
     6181 cgggg
//
LOCUS       DATIFF010000334         2160 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1429692, whole genome shotgun sequence.
ACCESSION   DATIFF010000334 DATIFF010000000
VERSION     DATIFF010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2160
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1429692"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1155)
                     /locus_tag="VLD58_04845"
     CDS             complement(<1..1155)
                     /locus_tag="VLD58_04845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HSB53656.1"
                     /translation="MTRILDNHDTHAFATRAVHAGPVADPLSGAVMPPIYQTSTYAQE
                     GLGRHTGYEYGRTQNPTREALERAVASLELGTHGFAFGSGLAALDAILKLFSAGDHIV
                     SGENVYGGSHRLMERVYTRFGLTFSFVDMRDPAKVAAAITPSTRMVYCETPTNPMMFL
                     ADLRAIGDITQARGVLLAVDNTFATPFFQQPLEFGADIVLHSTTKYLNGHSDMIGGML
                     VTRRDDLAERLGFLQNASGGVPGPMDCWLCLRGLKTLPLRMQRHDATGRELAVWLKTQ
                     PKVKKVYYPGLPEHPQHDLARRQMRGFGGMISLELGDPALARRVVERTRIFTLAESLG
                     GVESLIGHPASMTHASVPLALRQSMGLTDSLVRLSCGIEEPADLMADLEQA"
     gene            1275..>2160
                     /locus_tag="VLD58_04850"
     CDS             1275..>2160
                     /locus_tag="VLD58_04850"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HSB53657.1"
                     /translation="MAPRCLVVDDDAAVRRSIARVIEALGLQPMQADGGGEALAMLAA
                     EGEVPLIISDVNMPGISGLELLVEVQKRYPDTAVLMLSGVADVKTAVACLDKGALDYI
                     AKPALLDEVRARVAKALEKRDLLLQRRFYQKNLELRVRVQASRIKELFLQGVQTLAHA
                     LEAKDAYTSGHSMRVSRYAAATAVRLGFTGERLEEVRLGAELHDIGKIGTREAVLNKP
                     GPLTDEEFAHITEHTTLGERILAPLARENPTVLQIVRNHHERMDGRGFPDKLKGDQIP
                     IEARIVCVVDAFDAMTTNR"
BASE COUNT          369 a          676 c          775 g          340 t
ORIGIN      
        1 cgcctgctcc aaatccgcca tcaggtcggc cggctcctcg atcccgcagg acagccggac
       61 caggctgtcg gtcaggccca tggactgccg gagggcgagc gggaccgatg cgtgggtcat
      121 gctggccggg tggccgatca ggctctccac cccgcccagc gattcggcca gggtaaagat
      181 gcgggtgcgt tccactaccc gccgggccag cgccggatca cccagttcca gggagatcat
      241 gcccccgaac ccgcgcatct gccggcgggc gagatcgtgc tgcggatgct cgggcagtcc
      301 tggatagtag accttcttca ctttcggctg ggtcttgagc cagacggcca gctcgcggcc
      361 ggtggcgtcg tggcgctgca tccggagcgg cagggtcttg agcccgcgga ggcagagcca
      421 gcagtccatc gggccgggta cgccgccgga agcgttctga aggaagccga gccgttcggc
      481 cagatcgtcg cggcgggtca ccagcatgcc gccgatcatg tcggagtggc cgttgaggta
      541 cttggtagtc gaatgcagga cgatgtcggc gccgaactcg aggggttgct ggaagaaggg
      601 cgtcgcgaag gtgttgtcga cggcgaggag cacgccgcgc gcctgggtga tgtcgccgat
      661 ggcgcgcagg tcggccagga acatcatcgg attggtgggt gtctcgcagt agaccatgcg
      721 ggtggacggc gtgatcgccg cggcgacctt cgccgggtca cgcatgtcca cgaagctgaa
      781 cgtgagaccg aagcgggtgt agacccgctc catcagccgg tgcgatccgc cgtacacgtt
      841 ttcgccggaa acgatgtgat cgcccgcgga gaagagcttg agaatcgcgt ccagcgcggc
      901 caggccggag ccgaacgcga acccgtgggt gcccagttcc aggctcgcta cggcgcgttc
      961 gagcgcctcg cgggtgggat tctgggtccg gccatactcg tagcccgtgt gccgccccag
     1021 cccctcctgc gcgtaggtgg aggtctggta gatcggcggc atgaccgcgc ctgagagcgg
     1081 gtcggccacc gggccggcgt gcaccgcgcg ggtcgcgaag gcgtgggtgt cgtggttgtc
     1141 gagaatccgg gtcatgcacg gtggggtaag agtcgcggga aggttaggtg ggcgtctggc
     1201 agtcagcaag gcaatggggg ccgggaggaa atatgtcgct agaaacattg gctgaacggg
     1261 ccgagacccg taccatggca ccgcgctgcc tcgtggtgga tgacgatgcc gccgtacgtc
     1321 ggagcattgc ccgggtgatc gaggcgcttg gacttcagcc gatgcaggcc gacgggggcg
     1381 gggaagcact ggcgatgctg gcggcggaag gggaagtccc tctgatcatc agcgacgtca
     1441 acatgcccgg tatctcgggc ctcgagctcc tcgttgaggt ccagaagcgc tatcccgata
     1501 ccgccgtcct gatgctctcg ggtgtggccg acgtgaagac cgcggtggcc tgtctcgaca
     1561 agggcgcact cgattacatc gccaagcccg cgctgctcga tgaagtgcgg gcccgggtgg
     1621 ccaaggcgct cgagaagcgc gacctcctgc tccagcggcg cttctaccag aagaacctcg
     1681 agctccgggt ccgggtgcag gccagccgga tcaaggaact cttcctccag ggtgtgcaga
     1741 cgctggccca cgcgctggaa gcgaaggacg cctacaccag cggccattcc atgcgggtga
     1801 gccgctacgc cgccgccacc gccgtccggc tcgggttcac cggcgagcgg ctggaagaag
     1861 tccggctcgg cgccgaattg cacgatatcg gcaagatcgg cacccgcgag gcggtgttga
     1921 acaagccggg tccccttacg gatgaggagt tcgcccacat caccgagcac accacgctcg
     1981 gcgaacggat cctggcgccc ctggcgcggg agaatcccac cgtgctccag atcgtccgca
     2041 accaccacga gcgaatggat ggccgagggt tccctgacaa gctcaagggc gaccagatcc
     2101 cgatcgaggc gcggatcgtc tgcgtggtcg acgcgttcga tgcgatgacc accaaccggg
//
LOCUS       DATIFF010000335         1753 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2045829, whole genome shotgun sequence.
ACCESSION   DATIFF010000335 DATIFF010000000
VERSION     DATIFF010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1753
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2045829"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..705
                     /gene="hflX"
                     /locus_tag="VLD58_04855"
     CDS             <1..705
                     /gene="hflX"
                     /locus_tag="VLD58_04855"
                     /inference="COORDINATES: protein motif:HMM:TIGR03156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HSB53658.1"
                     /translation="MSRLAGGIGGRGPGETKLEVDRRRVRKRISQLEEALEEVRRHRR
                     QLRSRRDKKRLPVISIIGYTNAGKSTLLNSLTQSRVLAESRLFATLDPSSRRLRFPKE
                     IEVIITDTVGFIRDLPQDLMVAFRATLEELEVADLLLHVIDTSNPRVEDQIQAVEAIL
                     ADLRLDLKATLKVFNKKDLAAAERVEALCRRHEAVAIAAVDKTTLAPLIERMQAMIAG
                     PAPTGVGPHGPISAAP"
     gene            788..1573
                     /locus_tag="VLD58_04860"
     CDS             788..1573
                     /locus_tag="VLD58_04860"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HSB53659.1"
                     /translation="MDLESLERTAVRAAYRGAEVLRARYGRLSSIEKKGPTDLVTDAD
                     FASETEIVATIRAAFPDHAIVAEESGMRGGAAEWRWLVDPLDGTVNYAHQVPFFAVSI
                     ACVQGDEGRLGVVLNPVSGELFTARSGGGARLNGQPIRVGPETRVSESLLATGFPYDL
                     GPGFKRLSERFLRCLRAARGVRRLGSAALDLCFVACGRFAGYWEDGLQPWDSAAGILI
                     AREAGGRVTDFSNRPAGAGAGEVLATNGGIHSEMLTFMEAGDR"
BASE COUNT          289 a          599 c          591 g          274 t
ORIGIN      
        1 atgtcccgcc tggcgggcgg catcggcgga cggggtcccg gggagaccaa gctcgaagtc
       61 gatcggcgcc gggtgcgcaa gcgcatcagc cagctcgagg aggccctgga ggaggtccgg
      121 cgccaccgcc gccagctgcg atcccggcgg gacaagaaac gcctgccggt gatctcgatc
      181 atcggctaca ccaacgccgg caaaagcacc ctgctcaaca gcctgaccca aagccgggtg
      241 cttgccgaaa gccggctctt cgccaccctg gacccctcca gccgccggct ccgcttccct
      301 aaggagatcg aggtcatcat caccgacacc gtcggcttca tccgcgacct gccgcaggac
      361 ctgatggtgg cctttcgggc aacgctcgaa gagttggagg tcgccgacct gctgctgcac
      421 gtcatcgaca ccagcaaccc ccgcgtcgag gaccagatcc aggcggtgga ggccatcctg
      481 gccgacctcc ggctcgacct caaggccacc ctcaaggtct tcaacaaaaa agacctcgcc
      541 gccgccgagc gggtcgaggc cctgtgccga cggcacgagg ccgtggccat cgccgcggtg
      601 gacaaaacca ccctcgcccc gctcatcgaa cggatgcagg ccatgatcgc aggcccggcg
      661 cccacggggg tcgggcccca cgggccgatt tcggccgcac cttgaggagc acatcctccg
      721 tccccaacgc tcaccacaag ctattgcggt tgacatgcac ccttaaaccg atatagtgtg
      781 atgccatatg gatcttgaat cgttggagcg aacggccgtc cgcgccgcct atcgcggcgc
      841 cgaggtgttg cgcgcccgct acgggaggct gagctcgatc gaaaaaaagg ggccgaccga
      901 cctggtcacg gacgcggatt tcgcctccga aaccgagatt gtcgccacga tccgagccgc
      961 cttccccgat cacgccatcg tggccgagga gagcgggatg cggggcggcg ctgccgagtg
     1021 gcgatggctg gtggacccgc tggacggcac ggtcaactac gcccaccagg tgccgttttt
     1081 cgccgtctcc atcgcctgcg tccagggcga cgaggggcgg ctgggcgtgg ttctcaaccc
     1141 ggtcagcggg gagctgttca ccgcccgatc cggcgggggc gcccggctga acgggcagcc
     1201 gatccgcgtc ggcccggaaa cccgggtttc ggaaagtctg ctggcgaccg gcttccccta
     1261 cgacctgggg ccggggttca agcgcctgtc ggaacggttt ttgcgatgcc tcagggcggc
     1321 acggggcgtc cgccgcctgg ggtccgcggc gctggacctg tgtttcgtcg cctgcgggcg
     1381 cttcgccggc tactgggagg acggcctgca gccgtgggac tcggccgccg gcatcctcat
     1441 cgcccgggag gcgggcggcc gggtgaccga tttttcaaac cggccggccg gcgctggtgc
     1501 cggcgaggtg ctggccacca acggcggtat ccattcagag atgctgactt tcatggaggc
     1561 gggcgaccgt tgacggaaaa aacccctgtt cgtgttcgcc gggcacgcgt gaccgccgtc
     1621 ttgcgtctgg gatgcttcgg gggcttccga tccgaagacc ggatctgccg ccggcactgc
     1681 gcggtccgca tccggtgtgc cattgcaagg gatcagaaga tctacctgga ggtctgcgag
     1741 gagatggagc tcg
//
LOCUS       DATIFF010000336         5420 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_45729, whole genome shotgun sequence.
ACCESSION   DATIFF010000336 DATIFF010000000
VERSION     DATIFF010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5420
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45729"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..779)
                     /locus_tag="VLD58_04865"
     CDS             complement(<1..779)
                     /locus_tag="VLD58_04865"
                     /inference="COORDINATES: protein motif:HMM:NF016816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M55 family metallopeptidase"
                     /protein_id="HSB53660.1"
                     /translation="MRRLLLAGLLLAPVPLAAQGQAGPAAPAQPPRDTTPPEAYFGVT
                     EYQLARQKLELDMQKHGFSVYIIGDMEGLAGVVRNATEMRPVLRGGSPEHERFREELT
                     DEINAVIAGARAAGATQFIVNEGHGGTLFRNVLVEKLDPEAILIRGYPKPIVMSTGLN
                     PMVDAMMIVGAHANAGSPGIISHSFAFDSFTVNSRMLNETGIAAFIGGEMGVPMALAS
                     GDDVLTSETKEMLGPLETVTVKTAFSRSAAAVMPPAVVHREL"
     gene            complement(776..1753)
                     /locus_tag="VLD58_04870"
     CDS             complement(776..1753)
                     /locus_tag="VLD58_04870"
                     /inference="COORDINATES: protein motif:HMM:NF016816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M55 family metallopeptidase"
                     /protein_id="HSB53661.1"
                     /translation="MRSLAVSAALCLALAAAVEAQQGSAPFRDKRIPHEAGFRVFLVP
                     DMEGMASAVDGREILAGNETPAYKDRSSPDYWDRFRSLVTQEVNATIKGARLGGARSF
                     VVNEGHGGNLFANVLPFDLDSTAILIRGFPKPLVMVTGIDSSFGTLMFTGAHASAGKP
                     GIMAHNFAFDAFTVNGKALNEVGINALIAGELGVSVSLVSGDDVLIEETRGILGNDFI
                     GIVTKRAVGRTAAITYSPAKVRQMLRTGATEAVRRELKGDFKPFTLEKPYQVEFTLRR
                     SYPDSVVEAIAALPEFKLERTAPRTFRYTTDSARQMGWLLDAIEEKVLR"
     gene            complement(1779..3167)
                     /locus_tag="VLD58_04875"
     CDS             complement(1779..3167)
                     /locus_tag="VLD58_04875"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSB53662.1"
                     /translation="MTSAPAATVAIRSPYTRGIVGHATLATPADVARALDAAVAAAPA
                     AQAMPSHARASVLNRIANAVTDRRDELARLLAAEAGKPVALARTEVDRAVFVFRQGAE
                     EATRIGGEVIPMDLAPHGEGRLAVTRRFPLSPISGIIPFNFPILLAAHKLAPAIACGA
                     TMVLKTPPQDPLATLLLGEIVRAAGYPEGAIAFLYCTNEVAAPLIDDPRVRMVTFTGS
                     GRAGWGIRQRAFQKKVTLELGGNAAVIIEPDADLDHAVKRCVAGGYLYAGQSCISTQR
                     ILVHQSRYDAFLERFVPAVGALRTGDPLAETTDVGPMIDEANAERAEQWLAEAVAGGA
                     KLAVGGKRTGAILTPAVVLNSTGSMRVNCEEIFAPVTTVRPYTDFDQAIAAVNDSPYG
                     LQAGLFTNNMRTILTAFERIEVGGLVTNEVPGYRVDHLPYGGVKLSGQGREGVRYAIE
                     EMTELRLLVLGG"
     gene            3282..5129
                     /locus_tag="VLD58_04880"
     CDS             3282..5129
                     /locus_tag="VLD58_04880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53663.1"
                     /translation="MNWILTLVVGAITSVAGGALAGFVANQATDWYSVPSREGAAGYF
                     VLGFILLGLIVGFGIGVVTTRVVAARPDPGILKALGLSLMTLVSVVILGGGTARLLAD
                     VGPTIDGKNLILNVEFRWPEGAELPADTSQWFLRLSSASGRTVRTSEVGPLWREDARK
                     EDGRWIVPGAVNLFTSRGTRLISVEPAGVIATGYEAPVPAWPGRSKFDWSDWLPRPRA
                     GAPPLPGGVTYRWRLVPEDQPIRMQRFGDFEISTIATWLGDAQYGSAPRTWTGYATFA
                     VRYRGKPVEIEGKSDTRDSTVTYQRMQSVALLPGADTALLVQVGGQRGWGDVWLVSPA
                     GDTIATQAIAEGFNWNTASLLTNDPARFRQSAVRDPGEGKVELTGYSTPGLYLFPGAV
                     FDSRTRSVRKFSAEGVYNIIDRLPPVAVSPDERSFVRVGNRPDTSEAWQLEVFDLASG
                     KRYQLPVDRYRMRFGRVDDLDPAVVARFFEWSRGADGRDHLIPRAHPVPLPYRGVMSF
                     DDPDYREYRVYLATESLRGAMIDWLAQEFQGERLPADSGAHSLQVKVKGQTVYLSWDP
                     SDEHVGLWVDRGSDTSLVTRIAERWNAALATGRYDRYFADKPPSPGEAS"
     gene            complement(5142..>5420)
                     /locus_tag="VLD58_04885"
     CDS             complement(5142..>5420)
                     /locus_tag="VLD58_04885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53664.1"
                     /translation="PTVAPCVSARVAYLRFSISIDDIAGSANGVQLNGGGGFLFRLGA
                     RTNLDLGATFGYANFEDLESTVGAGDTIGLGSGTNLVVRAGVTFGLFN"
BASE COUNT          851 a         1775 c         1896 g          898 t
ORIGIN      
        1 agctcgcggt gcaccacggc cgggggcatt actgccgcgg cggagcggga gaaggccgtc
       61 ttcaccgtga cggtctcgag cggccccagc atctccttcg tctcgctggt gagcacgtca
      121 tcaccactcg cgagcgccat gggaactccc atttcgccgc cgatgaacgc ggcgatgccg
      181 gtctcgttca acatccggct gttcacggtg aaggagtcga atgcgaagct gtgggagatg
      241 atccccgggc tcccggcgtt ggcatgggcc ccgacgatca tcatcgcgtc gaccatcggg
      301 ttgagcccgg tcgacatcac gatcggcttg ggatagccgc ggatcaggat ggcctcggga
      361 tcgagcttct cgaccagcac gtttctgaac agggtcccgc cgtgcccttc gttcacgatg
      421 aactgggtgg cgccggcggc gcgcgcgccc gcgatcaccg cgttgatctc atcggtcagc
      481 tcctcgcgga agcgctcgtg ctcgggggag ccaccccgga gcaccggccg catctcggtg
      541 gcgttccgca ccacgccggc caaaccttcc atgtcgccga tgatgtagac gctgaagcca
      601 tgtttctgca tgtcgagttc cagcttctgc cgggccagct ggtactcggt gaccccgaag
      661 taggcctcgg gtggcgtcgt gtcccggggc ggctgggccg gggcggcggg cccggcttgg
      721 ccctgcgccg caagcggcac cggggcgagt agcaggccgg caagaagaag gcgcctcatc
      781 ggagcacctt ctcttcgatg gcatcgagca gccagcccat ctgcctggcg ctgtcggtgg
      841 tgtacctgaa ggtgcggggc gcggtgcgct ccagcttgaa ctcggggagc gccgcgatgg
      901 cctcgaccac gctgtcggga tagctccggc gcagggtgaa ctccacctgg tagggcttct
      961 ccagggtgaa cggcttgaag tcacccttga gctcgcgccg caccgcctcc gtcgcgccgg
     1021 tccggagcat ctgccgcacc ttcgccgggc tgtaggtgat ggcggcggtg cgtcccaccg
     1081 cccgcttggt gacgatcccg atgaagtcgt tgccgaggat accccgggtt tcctcgatca
     1141 gcacgtcgtc gccgctcacg agcgataccg agacgcccag ttccccggcg atcagcgcgt
     1201 tgatgccgac ttcgttgagg gccttgccgt tcaccgtgaa ggcgtcaaag gcgaaattgt
     1261 gcgccatgat gccgggcttg cccgcgctgg cgtgggcgcc ggtaaacatc agggtgccga
     1321 agctgctgtc gatgcccgtg accatgacca gcggcttggg aaagccgcgt atcaggatgg
     1381 cggtgctgtc gaggtcgaag gggagcacgt tggcgaacag gttgccgccg tggccttcgt
     1441 tcaccacgaa gctgcgggca ccgccgagcc gggcgccttt gatcgtcgcg ttcacctcct
     1501 gggtcaccag cgagcggaac cggtcccagt agtccgggct ggagcggtcc ttgtaggccg
     1561 gggtctcgtt gcccgcgagg atctcgcggc catctaccgc gctggccatg ccttccatgt
     1621 ccggcacgag aaagacccgg aagccggcct cgtggggaat cctcttgtcg cggaacggcg
     1681 ccgagccctg ctgcgcctcc acggccgcgg cgagcgcaag gcacaacgcc gccgataccg
     1741 ccagtgatcg catcacgtct ccctggtgtg tgtccgagtt acccgccgag gaccagtagc
     1801 ctgagctccg tcatttcttc gatcgcgtag cgcacccctt cgcgcccctg gcccgacagc
     1861 ttcacgccgc cgtaggggag gtggtctacc cggtagccgg ggacctcgtt ggtgaccagc
     1921 ccgccgacct cgatccgctc gaaggctgtg aggatggtgc gcatgttgtt ggtgaagaga
     1981 ccggcctgga ggccgtaggg cgaatcgttg acggcggcga ttgcctggtc gaaatcggtg
     2041 tacggccgca ccgtggtgac cggggcaaag atctcttcgc agtttacgcg catgctcccc
     2101 gtgctgttga gcaccacggc cggggtcagg atggcgccgg tccgcttccc gccaaccgcc
     2161 agcttcgccc ctcccgccac cgcttcggcc agccactgct cggcccgttc ggcgttggcc
     2221 tcgtcgatca tcgggcccac atcggtcgtc tcggcgagag ggtcgccggt ccggagcgcc
     2281 ccgaccgcgg ggacgaaccg ctcgaggaag gcgtcgtagc gcgactggtg caccaggatc
     2341 cgctgggtgg agatgcagga ctggcccgca tagaggtacc cgccggcgac gcagcgcttg
     2401 accgcgtggt cgaggtcggc gtcgggctcg atgatgactg cggcgttccc gcccagctcc
     2461 agcgtcacct tcttctggaa ggcccgttgg cggatgcccc agccggcgcg gcccgagccg
     2521 gtgaaggtca ccatccgcac ccgggggtca tcgatcagtg gggctgcgac ctcgttggtg
     2581 caatagagga aggcgatcgc gccctcgggg tagcctgcgg cgcggacgat ctctcccagg
     2641 agcagggtcg cgagcggatc ctggggcggc gtcttgagca ccatggtggc accgcacgcg
     2701 atggcgggcg ccagcttatg ggccgcgagc aggatgggga agttgaacgg gatgatcccc
     2761 gagatgggcg agaggggaaa gcgacgggtc accgccaagc ggccttcgcc gtgaggcgcg
     2821 agatccatcg ggatcacttc gccgccgatg cgggtcgcct cctcggcgcc ctgccggaaa
     2881 acgaacaccg cgcggtcgac ctcagtccgc gcgagcgcca ccggcttccc cgcctcggcc
     2941 gcgagcagac gggccaactc atcgcgccgg tcggtgacag cattggcaat ccggttgagg
     3001 accgaggccc gggcgtgcga tggcatcgcc tgggccgcgg gagccgccgc tactgccgca
     3061 tcgagcgcac gagccacatc ggccggagtg gcgagcgtcg catgaccgac gatgccccgg
     3121 gtgtatgggc tacgaatggc gacggtggcc gccggggcgg aggtcatccg atgaatcctg
     3181 ggtgtcgtgg aggagagggc gggtaaggtg cggagcagag gcggtggacg caaggcatca
     3241 tgtcttgccc tccggcccga gacggatacg atacaccccc catgaactgg atactcacac
     3301 tcgtcgtcgg cgccatcacc tcggtggctg gcggcgccct ggccggattc gtcgccaatc
     3361 aggcaacgga ctggtacagc gtgccgtcgc gcgaaggtgc ggccgggtac ttcgtcctcg
     3421 gcttcatcct cctcggcctg atcgtcgggt tcggcatcgg cgtcgtgacc acccgggtgg
     3481 tcgcggcgcg gcccgacccg ggaattctca aggcgctggg cctgagcctc atgacgctgg
     3541 tgagtgtggt catcctcggc ggcgggacgg cgcggctcct cgccgacgtg ggtccgacca
     3601 tcgacgggaa gaacctcatt ctcaatgtcg agtttcgctg gccggaaggg gccgagcttc
     3661 cggccgatac ctcgcagtgg ttcctccggc tcagctcggc gagcggccgg acggtgcgca
     3721 ccagcgaggt ggggccactc tggcgcgagg acgcccggaa ggaagacgga cgctggatcg
     3781 tcccgggggc ggtgaacctg ttcaccagcc gcggcacccg gctcatctcg gtggaacccg
     3841 caggggtgat cgcgaccggc tacgaggcgc cggttccggc ctggccggga cggagcaagt
     3901 tcgactggag cgactggctg ccccggccgc gcgccggcgc gccgccgctt cccgggggag
     3961 tcacctatcg ctggcgcctg gttcctgagg accagcccat ccggatgcag cggtttggcg
     4021 acttcgagat ctcgaccatc gcgacctggc tgggcgacgc gcagtacggc agcgcaccga
     4081 ggacctggac cggctatgcc accttcgccg ttcggtatcg cggcaagccg gtcgaaatcg
     4141 agggaaagag cgacacccgg gacagcacgg tgacgtacca gcgcatgcag tcggtggcgc
     4201 tcctgcctgg agcggatacg gccctgctgg tgcaggtggg cggtcagcgt ggatggggcg
     4261 acgtgtggct ggtttcaccc gcgggagaca cgatcgctac gcaggcgatc gccgaggggt
     4321 tcaactggaa caccgcatcg cttctcacca acgatccggc gcggtttcgg cagagtgccg
     4381 tgcgggatcc aggtgagggg aaggttgagc tgacgggcta ctcgacaccc ggcctgtacc
     4441 tcttccctgg agcggtgttc gacagccgga ctcgcagcgt gcggaagttc agcgccgaag
     4501 gagtgtataa catcatcgac cggctgcccc cggtggccgt gagccccgac gagcggagct
     4561 tcgtgcgggt cggcaaccgc cccgatacca gcgaggcctg gcagctcgag gtgttcgacc
     4621 tcgcgagcgg aaagcgttat caactgccgg tcgaccgtta tcggatgcgg ttcggccggg
     4681 tggacgatct cgaccctgca gtggtagcga ggttcttcga gtggagccgc ggagccgatg
     4741 gccgggacca tctcattccc cgggcccacc cggtgcctct gccttatcgc ggggtgatga
     4801 gcttcgacga ccccgactat cgcgagtacc gggtgtacct cgccaccgaa tcactccggg
     4861 gcgcaatgat cgactggctg gcgcaggagt tccagggcga gaggctgccg gccgattcgg
     4921 gagcccactc gctccaggtc aaggtgaagg ggcagacggt ctatctctcc tgggatccgt
     4981 cggacgaaca tgtcgggctc tgggtcgatc gcggcagcga taccagtctg gtcacccgga
     5041 tagccgagag gtggaatgcg gcgctggcga ccggcaggta cgaccggtac ttcgccgaca
     5101 aaccgccttc acccggagaa gccagttgat cctggctggc cttagttgaa caacccgaac
     5161 gtgactcccg ctcggaccac caggttggta cccgagccca gcccgatcgt atctcccgcg
     5221 cccacggtgg actcgaggtc ttcgaaattg gcgtagccaa aggtggcgcc gagatcgaga
     5281 ttggtccgcg ctcccagccg gaagagaaac cctccgccgc cgttcagctg gacgccgttg
     5341 gccgacccgg caatgtcgtc gatactgatg ctgaagcgca ggtacgccac tcgcgccgag
     5401 acacatggcg ccacggtcgg
//
LOCUS       DATIFF010000337         1608 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1892196, whole genome shotgun sequence.
ACCESSION   DATIFF010000337 DATIFF010000000
VERSION     DATIFF010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1608
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1892196"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..521)
                     /locus_tag="VLD58_04890"
     CDS             complement(<1..521)
                     /locus_tag="VLD58_04890"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSB53665.1"
                     /translation="MNRRLVLAACLAALGCRRETIPIPTGEGRLAVPGGRIWYTVTGT
                     GSAAPLVLLHGGPGFSSFYLKPFEALGGDRPVIRYDQLGGGKSDRISDTAMFTIPHFV
                     AELDSLRAALGIARWHLLGHSWGTILALEYYRAHPDRVASLTFASPVFDLPAYERHAR
                     DLLATLSDSSQQAV"
     gene            complement(553..1371)
                     /locus_tag="VLD58_04895"
     CDS             complement(553..1371)
                     /locus_tag="VLD58_04895"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF015998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSB53666.1"
                     /translation="MTATLKPVSQTAYYCCGVRALDATAARPVCGDQYAERFMTSEGW
                     ALFEPFRGLRAPNACNIARHRIIDDLLRARLTHRPETGVVIIGAGFDTRAFRLPGGRW
                     VEVDEPALIAVKEARLPAREAPNPLTRVAITFDRERLQQSLLPFRHLADPVVVLEGIL
                     TYLSLGEVQETLRAIRTTFTHPTVVCDLTTPTFARRYAGKIGDRLRQLGAPYGSLGAD
                     PLELILAAGFRLTMRQSIVARAAELGMLRTPRWLLATVLRSLRDGYTIATFEPA"
     gene            complement(1384..>1608)
                     /locus_tag="VLD58_04900"
     CDS             complement(1384..>1608)
                     /locus_tag="VLD58_04900"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HSB53667.1"
                     /translation="ADFERCRLEDLLEEYAAVRTATLALLRGLPPPAWIRRGRVNGYG
                     CSPRGLAFHIAGHELHHDRVIRERYVGLPA"
BASE COUNT          262 a          543 c          587 g          216 t
ORIGIN      
        1 accgcctgct gggacgaatc ggagagtgtt gcgagaaggt cccgggcgtg ccgctcgtag
       61 gcggggaggt cgaacaccgg gctcgcgaag gtgagcgacg ccacccggtc gggatgggct
      121 cggtagtact ccagggcgag gatcgtgccc cacgaatgtc ccagcaggtg ccaccgggcg
      181 attcccaggg cggcacggag cgagtccagc tccgccacga agtgggggat ggtgaacatc
      241 gccgtatcgg aaatccggtc cgacttgccg cctcccagct ggtcgtagcg gatcaccggc
      301 cgatcgccac cgagcgcctc gaacggcttg agatagaagc tcgagaagcc cggcccgccg
      361 tgcagaagga ccagcggggc ggcggacccg gtgcccgtca ccgtgtacca gatccgcccc
      421 ccgggcacgg ccaggcggcc ctcaccggtg ggaatcggta tggtctctcg gcggcacccg
      481 agcgccgcga gacacgcggc caacacgagc cttcggttca tgggccgact cctcctggct
      541 ggggaagcgt ggttacgccg gctcgaaggt ggctatggtg tagccgtcgc gcagggaccg
      601 cagcaccgtc gccagaagcc accggggggt ccgcagcatg ccgagctccg ccgcccgggc
      661 cacgatggac tgacgcatgg tcagtcggaa ccccgccgcc aggatcagct cgagcgggtc
      721 ggccccgagg ctgccgtagg gggcgccgag ctgacggagc cggtcgccga tctttccggc
      781 gtaccgccga gcgaaggtcg gggtcgtcag gtcgcacacg accgtcggat gggtgaaggt
      841 ggttcgtatg gcgcgaagcg tctcctgcac ttctcccagc gacaggtacg tcaggatccc
      901 ctccagcacg acgaccgggt ccgccaggtg gcgaaagggg agcagcgatt gctggagccg
      961 ctcgcggtcg aacgtgatcg cgacccgggt gagcgggttg ggcgcctcac gcgctgggag
     1021 gcgcgcctcc ttgaccgcga tcagcgccgg ctcatccacc tcgacccagc gcccgccggg
     1081 caggcggaag gcgcgagtgt cgaagccggc gccgatgatg acgaccccag tttcaggtcg
     1141 gtgggtcagt cgagcccgga gcaggtcatc gatgatgcga tggcgggcga tgttgcaggc
     1201 attcggggcg cgaaggccac ggaagggctc gaacagggcc catccctcgg acgtcatgaa
     1261 ccgctcggcg tactggtcgc cacagaccgg ccgtgccgcc gtcgcatcca gggcgcgcac
     1321 cccgcagcag tagtaggcag tctgggaaac cggcttcaac gtcgccgtca ttcggcgtgc
     1381 ctctcaggcc ggcagcccga cgtagcgctc gcggatcacg cggtcgtggt gcagctcgtg
     1441 gcccgcgatg tggaacgcca accctcgagg cgagcagccg tagccgttga cccggccgcg
     1501 ccggatccac gcggggggcg gcaggccccg caggagcgcc agggtcgcgg tccgcaccgc
     1561 ggcgtactcc tccagcaggt cctccaaccg gcagcgctcg aagtcggc
//
LOCUS       DATIFF010000338         2720 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1276976, whole genome shotgun sequence.
ACCESSION   DATIFF010000338 DATIFF010000000
VERSION     DATIFF010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2720
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1276976"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..249
                     /locus_tag="VLD58_04905"
     CDS             <1..249
                     /locus_tag="VLD58_04905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53668.1"
                     /translation="EEIREIEDGRAPRENNLLTNAPHTLVQVIGDAWDRPYSRERAAF
                     PAPGLREHKTWPTVGRVDGAYGDRNLVCTCPAVAEYGS"
     gene            257..1021
                     /locus_tag="VLD58_04910"
     CDS             257..1021
                     /locus_tag="VLD58_04910"
                     /inference="COORDINATES: protein motif:HMM:NF015084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase family protein"
                     /protein_id="HSB53669.1"
                     /translation="MTATRRLCLALDHEARSGAENMAVDQTLLDRADQSGAGFLRLYR
                     WAPFCLSFGRHEPALRRYDRTRIASLGLDVVRRPTGGRAVWHARELTYSVAAPIAWFG
                     SLSESYCEIHRLLARALERLGVPALLAPSERTPNVGSGACFASPVGGEVLVHGRKLVG
                     SAQVRQGSAFLQHGSILLADDQEMVARVTRGEAPASDEITLSEALGREVTFSEAADAV
                     TATLGDDLDLSEAPIAPAADPEHLARFRDPAWTWRR"
     gene            1062..2681
                     /locus_tag="VLD58_04915"
     CDS             1062..2681
                     /locus_tag="VLD58_04915"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HSB53670.1"
                     /translation="MTSHRLLAAGLVAAALLPSRFPLAAQRPRDPATLAVAYPRDPSS
                     PIPTLWRGDNANRDVSDLMFLRLADLGPQLTTIGDKGFVPRLARKWERRDPLTLVFEL
                     DPRARWHDGKPVTAADVLLGFERARNPRISAQIATLLRRIQSVTAEGERRVVVKFTEA
                     YPEQLYDAVFHALPLPAHLLAGIPAESLATSNYAAAPVGNGPYRFVRRVPAQVTELAA
                     NTGFFLGKPKVQRVLFLVASDAEARANLILSGTADAIDNIYSFDNPARLEKLPDYQYY
                     PVPGLNLIYLSFNQRDPSDTSKPHPILSDPVVRRALVLAADRQLIARATYGPFVTSPG
                     APLSAILGRSLDAPPTPPYDTAAAKTLLASRGWIDHNGDGIRDKDGVKLSLSVLVPAP
                     VAARKVMATRLQEAYRGLGIELRIDVAEQAVYIERHDAGRFDLDFYGAGQDPSPSGLT
                     QTWTCAGFGGSNVSHYCNPVVDSLIARATVVQSGAPAMWRDALRRMADDYPAIFMAAL
                     VSTYAVHRRFENVRVVPGAPWSAVWQWGVRE"
BASE COUNT          407 a          982 c          905 g          426 t
ORIGIN      
        1 gaagagatcc gggaaatcga ggacgggcgc gcgccccggg agaacaacct gctcaccaac
       61 gcgccccaca ccctggtcca ggtgatcggt gatgcctggg accgccccta cagccgggag
      121 cgggccgcct tccccgcccc cgggctgcgc gagcacaaga cctggccgac ggtgggccgg
      181 gtggacggcg cgtatggcga ccggaacctg gtgtgcacct gtcccgcggt cgcggagtat
      241 gggtcgtagc gaagtcgtga ccgcaactcg ccgcctgtgc ctcgcgctgg atcacgaggc
      301 acggagcggc gccgagaaca tggcggtcga ccagaccctg ctcgaccggg ccgatcagag
      361 tggtgccggc tttctccggc tctaccgctg ggcccccttc tgtctgtcgt tcggccggca
      421 tgaacccgct cttcgccgct acgaccgcac ccgcatagca tcgctcggcc tcgatgtggt
      481 gcgccgccca accggtggcc gcgccgtctg gcacgcgcgt gaactcacct attccgtcgc
      541 cgcgccgatc gcctggttcg gctccctctc cgagagctac tgcgagattc accggctcct
      601 ggcccgggcc ctcgagcggc tcggtgtccc cgccctcctg gccccatcgg agcggacccc
      661 gaatgtcggc agcggcgcct gcttcgcgag tccggtgggc ggcgaagtgc tggtgcacgg
      721 gcgcaagctg gtcggcagcg cccaggtccg gcagggctcg gcctttctcc agcacgggag
      781 catcctgctg gctgacgatc aggagatggt ggcacgggtg actcggggcg aggcgccggc
      841 ttcggacgag atcacgctct ccgaagcgct gggccgcgag gtgacgttct ccgaggccgc
      901 cgatgcggtg accgcgacgc tgggggacga cctggacttg agcgaggctc ccatcgcccc
      961 cgcagccgac ccggagcacc tcgcccgatt ccgcgacccg gcctggacct ggcgccgctg
     1021 agggctacag cccttcccgc tcaaccacta caattgaagc aatgacctca catcgcctgc
     1081 tggcggctgg gctggtcgcg gctgccctcc tcccgtcccg gttcccgctc gcggcccagc
     1141 ggccgcgcga tcccgccacc ctcgcggtgg cgtatccgcg cgatccctca tcccccatcc
     1201 cgacgctctg gcggggcgac aatgccaacc gcgatgtctc cgacttgatg tttctgcgtc
     1261 tcgccgacct gggtccccag ctcaccacca tcggcgacaa gggcttcgtc ccccgactcg
     1321 cgcggaaatg ggagcgacgc gatccgctga ccctggtctt cgagctggat ccccgggcgc
     1381 gctggcatga tggaaagccg gtgaccgccg ccgatgtgct cctcggcttc gaacgggccc
     1441 gcaatccccg gatcagcgcc cagattgcca ccctgctccg ccgaatacag agcgtcaccg
     1501 ccgaaggcga gcggcgggtg gtggtgaagt tcaccgaggc ctatccggag cagctctacg
     1561 acgccgtctt tcacgcgctg ccgcttccgg cccatctgct cgccgggatt ccggccgagt
     1621 cgctcgcaac gtcgaattac gcggcggcgc cggttgggaa cggtccctat cggttcgtgc
     1681 gccgggtgcc ggcgcaggtt accgagctcg ccgccaacac cggcttcttt ctcggcaagc
     1741 ccaaggtgca gcgggtgctg ttcctggttg cctcggacgc ggaggcccgc gccaacctga
     1801 tcctctccgg tacggccgac gccatcgaca acatctactc gttcgacaat ccggcccggc
     1861 tcgagaagct gccggactat cagtattacc cggtgcccgg tctcaacctg atctacctca
     1921 gcttcaacca gcgggacccc tccgatacca gcaagcccca cccgatcctg agcgacccgg
     1981 tggtgcgccg ggcactggtc ctcgccgccg accgccagct gatcgcgcgg gcgacctacg
     2041 gccccttcgt cacctcgccc ggggcgccgc tctcggcgat cctgggccgc tcgctcgacg
     2101 ccccgccgac gccgccctac gacaccgccg cggcgaagac gctgctcgcg agccgcgggt
     2161 ggatcgacca caacggtgac gggatccggg acaaggatgg tgtcaaactg agtctctcgg
     2221 tgctggtgcc agcaccggtg gcggcccgga aggtgatggc cacccggctc caggaggcgt
     2281 accgcggact gggcatcgag ctccggatcg acgtcgccga gcaggcggtc tacatcgagc
     2341 ggcatgacgc ggggcgattc gacctcgact tctacggcgc gggccaggat ccctcgccca
     2401 gcggcctgac ccagacgtgg acctgcgccg gcttcggcgg cagcaacgtg agccactact
     2461 gcaacccggt ggtcgattcg ctcatcgccc gcgcgacggt ggtccagagc ggggcccctg
     2521 cgatgtggcg cgacgcgctc cgccgtatgg ccgacgacta tcccgcgatc ttcatggcgg
     2581 cgctggtgag cacctacgcg gtgcatcgcc ggttcgagaa tgtgcgggtg gtgccaggcg
     2641 cgccctggtc ggcggtgtgg cagtgggggg tgagggagta agaagtaaga agtaagaagt
     2701 aagaagtgag aagtgagaag
//
LOCUS       DATIFF010000339         1333 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_507448, whole genome shotgun sequence.
ACCESSION   DATIFF010000339 DATIFF010000000
VERSION     DATIFF010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_507448"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..304
                     /locus_tag="VLD58_04920"
     CDS             <1..304
                     /locus_tag="VLD58_04920"
                     /inference="COORDINATES: protein motif:HMM:NF013384.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="beta-eliminating lyase-related protein"
                     /protein_id="HSB53671.1"
                     /translation="PQAQFPAQTLAAELYLDSGIRSMERGIASAGRDPKTGDHYYPKL
                     ELTRLTIPRRVYTQAHMDVVAESVKSIFDRRAETRGLRMTYEPRYLRFFQAKFERL"
     gene            complement(472..1104)
                     /locus_tag="VLD58_04925"
     CDS             complement(472..1104)
                     /locus_tag="VLD58_04925"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSB53672.1"
                     /translation="MIRLLIADDHPIVREGLRRIAADQPGITVVAEAQTADEALARMS
                     QAPVDVMLLDVSMPGPGFIEVLQQVRRDHPTVKVLVLSVHPEDQWAVRALRAGAAGYL
                     TKDHSPEQLIEAIRRVYRGSKYVTAALAEKLATGLEAGGGVTPHETLSDREYEVLRGL
                     GAGLSVKDIAARLNLSSKTVSTYRSRILEKMQLRTNADLVRYVRDHALGD"
     gene            complement(1082..>1333)
                     /locus_tag="VLD58_04930"
     CDS             complement(1082..>1333)
                     /locus_tag="VLD58_04930"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB53673.1"
                     /translation="RIGFTQNSDELRLEVSDNGRGITQAELAGRRSLGLVGIRERAIA
                     CGGLLQITGREGEGTVVNVRIPRGGTGEQEVVRDSIADR"
BASE COUNT          203 a          474 c          446 g          210 t
ORIGIN      
        1 cccccaggcc cagttcccgg cccagactct cgccgccgag ctgtacctcg actcggggat
       61 ccgctccatg gagcggggga tcgccagcgc cggccgcgat ccgaagaccg gcgaccacta
      121 ctacccgaag ctcgagctga cccggctcac cattcctcgg cgggtataca cccaggccca
      181 catggatgtc gtggcggaat cggtgaagtc gatcttcgac cggcgggcgg agacccgggg
      241 gctgcggatg acctacgaac cccggtatct gcgattcttc caggccaagt tcgagcggct
      301 ttgagtcgca cctgtcattg tgaggcggcg cctcgtcccg agcgaagcga gggaagccgc
      361 cgccgcaatt cgtgatcggg gtatgagatt gcttcgtcgg ccccggcggg cccccccccc
      421 caaagacagg agggttggcc cccccgggcc accatacgaa ggcgggggag gtcagtcccc
      481 cagcgcgtgg tcgcggacgt agcgcaccag gtccgcgttg gtgcggagct gcatcttctc
      541 caggatgcgc gaccggtagg tgctgacggt cttggagctc aggttgagcc gggcggcgat
      601 gtccttgacg ctgagcccgg cgccgagtcc gcgcaggacc tcgtattcgc gatcggagag
      661 agtctcgtgg ggggtgaccc cgccgcccgc ctcgagtccg gtcgcgagct tttccgccag
      721 ggccgcggtg acgtacttgc tcccgcggta cacccggcgg atggcctcga tcaactgttc
      781 cggcgagtgg tccttggtga gataccccgc cgcccccgcc cgcagcgccc ggaccgccca
      841 ctgatcctcg gggtggacgc tgaggacgag gaccttcacc gtgggatgat cgcggcgcac
      901 ctgctgcagc acctcgatga agccgggacc cggcatggag acgtcgagca gcatgacatc
      961 gaccggcgcc tggctcatcc gggccagggc ctcgtcggcg gtctgggcct ccgccacgac
     1021 cgtgatgccg ggctggtccg cggcgatgcg ccgcagtcct tcccggacga tcgggtgatc
     1081 atcagcgatc agcaatcgaa tcacgcacca cctcctgttc gccggtaccg ccacggggaa
     1141 tccggacgtt gaccacggtg ccctcaccct cccgcccggt gatctgcagc aggccgccgc
     1201 aggcgatcgc ccgctcccgg attccgacca gcccgagaga gcgccgcccg gcgagctcgg
     1261 cctgggtgat gccccgcccg ttgtcagaga cttccagccg aagctcatcg ctgttctggg
     1321 tgaagccgat ccg
//
LOCUS       DATIFF010000340         2514 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_46286, whole genome shotgun sequence.
ACCESSION   DATIFF010000340 DATIFF010000000
VERSION     DATIFF010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2514
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46286"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(140..679)
                     /locus_tag="VLD58_04935"
     CDS             complement(140..679)
                     /locus_tag="VLD58_04935"
                     /inference="COORDINATES: protein motif:HMM:TIGR02246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgcJ/EcaC family oxidoreductase"
                     /protein_id="HSB53674.1"
                     /translation="MSRLPIYPSRSLAMRFASRLASLALLGTSLACAGAPPSADPARE
                     EAAIRALVTDWNGYLVAQNDSAITALYATDGILLPPGQPRVTGQASIRSFWAQLWAMK
                     ASLTLKTVNVRVAPSGDIAVEEGNWDFAAGDQKDHGKYLVVWSRATGSWRVAQDIWNS
                     DQPPPPTAAAASPAPARVQ"
     gene            complement(794..1126)
                     /locus_tag="VLD58_04940"
     CDS             complement(794..1126)
                     /locus_tag="VLD58_04940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53675.1"
                     /translation="MPKKSARSQRKAASPRSAPKKSVSKKKVALPSPRARRVNRNLPP
                     GICRVEQPSTRTFGFVVRVGHRPSPKGWRPKYTAYFGDHSHGGKKEALAAATKWLKTL
                     ARTGKPPA"
     gene            complement(1372..2265)
                     /locus_tag="VLD58_04945"
     CDS             complement(1372..2265)
                     /locus_tag="VLD58_04945"
                     /inference="COORDINATES: protein motif:HMM:NF017206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HSB53676.1"
                     /translation="MTRTIAVLGATGRVGHVVAEQLLAAGIAVRAVGRSPERLAPLAA
                     KGAEPCSGDASDPRFLARTFRHANGVFVMLPTDPAHPDPAAAAKACTEAAAAALQVAR
                     VPRVVVLSSVGADRPDRNGPIADLHALERRINSIPGIHAMHLRAGYFLENWLANIGLI
                     RSAGINGGGLAPDLPLPMIASRDIGLAAASLLATDFTGQRSRELQGARHYSCREVTTA
                     LGTAIGRPDLAYVQFPEADLRNAYLSAGLSEAMADRYLEMSRGFNEGAIKSLESRSPA
                     TTTATTADEFARTVFQPAYNS"
     gene            complement(2312..>2514)
                     /locus_tag="VLD58_04950"
     CDS             complement(2312..>2514)
                     /locus_tag="VLD58_04950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53677.1"
                     /translation="TQEDLFRRALVRAQQAGEIPAALDCLATARYLLNVIAGLGVAHK
                     AGASRDRLHDIVRISLTVLERH"
BASE COUNT          380 a          804 c          911 g          419 t
ORIGIN      
        1 ctcgcccagc gttccatctt cgggaagccg gcgcgcggcc cagctcaccg tttcggccag
       61 gcgctcctga aacggctgga gcgagcccga gagatcgggc tcactccgca ggatctcggg
      121 gttggtcacc cccgacattt cactgcaccc tggccggtgc cggggaagcc gccgctgccg
      181 tcggcggggg cggctgatcg ctgttccaga tatcctgcgc caccctccag ctcccagtcg
      241 cgcggctcca gacgaccagg tacttcccgt ggtccttctg gtcaccagcg gcgaaatccc
      301 aattgccctc ctcgaccgcg atatcccccg agggggctac gcgcacgttc acggtcttga
      361 gggtcaacga ggccttcatc gcccagagct gggcccagaa gctccggatg gaggcctggc
      421 cggtgacccg cggctggccc ggaggaagga ggatcccgtc agtggcatag agggcggtga
      481 tggcggagtc gttctgcgcg acgagatagc cattccagtc ggtgaccagc gcccggatgg
      541 cagcctcctc tctggccggg tccgcgctgg gcggcgcgcc agcacaggcg agcgaagttc
      601 ccagcagcgc gagcgaggcc aaccggctgg caaaccgcat tgcgagactc cttgaggggt
      661 agatgggcag gcgactcatg atgcgatgca acggccctct gcgccagagg gtggcgccgg
      721 tgcaggtacc cggaaacagg aacgccccgg ggccgacggc acccggggcg ttcgatggct
      781 gcttgctgcg ggctcaggct ggcggcttgc cggtgcgggc cagggtcttg agccacttgg
      841 tggcggcggc cagcgcttcc ttcttgccgc cgtggctgtg atcgccgaag tacgcggtgt
      901 acttggggcg ccagcctttg ggtgacggac gatgtccgac ccggaccacg aatccgaagg
      961 tgcgggtgct gggctgctcg acccggcaga tacctggggg aagattccga ttgactcggc
     1021 gcgccctggg tgagggcagc gcgaccttct tcttcgagac tgatttcttc ggagcggaac
     1081 gcggggacgc ggccttgcgc tgcgaccggg cgcttttctt gggcattcgc tactccagtg
     1141 tggacgagtc cgtgatctcg agggcctatc acgaacggcg cggaagatca cacaccctcc
     1201 tgcataatgg aagaggttcc gggcgtaact atgcagtgcg gttttctatc gcgtgatttc
     1261 cgtacgcatt gacccagatc cgggccttca tgaattcgag gcgtattcct gccggaggag
     1321 tccgcttttc tccccatcgc tggaggcgga tgcgcgggcg atgcccgccg gtcagctgtt
     1381 gtaggcgggc tgaaagacgg tccgggcgaa ttcgtccgcg gtggtcgcgg tggtggtcgc
     1441 gggtgagcgc gattcgaggg acttgatggc gccctcgttg aagccccggc tcatctcgag
     1501 ataccggtcg gccatcgcct cggaaaggcc ggcggagagg taggcattcc ggaggtccgc
     1561 ctcggggaac tggacgtagg ccagatccgg ccggccgatg gcggtgccga gtgcggtggt
     1621 gacctcgcgg cacgagtagt ggcgcgcgcc ctggagctcg cggctccgct gcccggtgaa
     1681 atcggtggca aggaggctcg ccgcggcgag cccgatatcg cgggacgcga tcatgggcag
     1741 tgggagatcc ggcgcgaggc cgcccccgtt gatgccggcg ctccggatga gtccgatgtt
     1801 ggccagccag ttctcgagga aatacccggc ccgcaggtgc atcgcgtgga taccggggat
     1861 ggaattgatg cggcgctcga gggcgtgcag atcggcgatg ggtccgttcc ggtcgggtcg
     1921 gtcggcgccg accgagctca ggacaacgac ccgcggcacc cgcgcgacct ggagggcggc
     1981 cgcggcggcc tcggtacagg ccttcgcggc agcagcgggg tcggggtgcg ccgggtcggt
     2041 cggcagcatg acgaagacac cgttggcatg ccggaaggtg cgagccagaa acctgggatc
     2101 gctggcgtca ccggagcagg gttcggcgcc tttggctgcg aggggcgcca gcctctccgg
     2161 cgagcggccc accgcgcgca ccgctatccc cgccgccagc agctgttccg cgaccacgtg
     2221 tcccactcgg cccgtcgcac ccagcaccgc aatcgtacgg gtcattcgca tctcgtgagt
     2281 tggtcctgcg aagggaggtg cggacctgcg gtcagtggcg ctcgagcacc gtcaggctga
     2341 tccgcacgat atcgtggagc cggtcgcggc tcgcgcccgc cttgtgcgcg acgccaagcc
     2401 cggcaatgac attgaggaga tagcgcgcgg tcgcgaggca gtcgagggcc gcggggattt
     2461 ctcccgcctg ctgggcccgc accagcgccc gccggaagag atcttcctga gtct
//
LOCUS       DATIFF010000341         1474 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_46448, whole genome shotgun sequence.
ACCESSION   DATIFF010000341 DATIFF010000000
VERSION     DATIFF010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1474
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46448"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..437
                     /locus_tag="VLD58_04955"
     CDS             <1..437
                     /locus_tag="VLD58_04955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53678.1"
                     /translation="DRGWYFDLLKYDQAARTSRPTQTPALSLVYALERQLARIDAEGG
                     VEARWRRHRAMLDVMERWAAGHPDFTLLAPPGRRSWSVSALTPPHGLTVPEVLSGMRA
                     RGFTLTGGLGDLAERVIRIGHMGDLEPAHLEAMLGELGRVGL"
     gene            857..>1474
                     /locus_tag="VLD58_04960"
     CDS             857..>1474
                     /locus_tag="VLD58_04960"
                     /inference="COORDINATES: protein motif:HMM:NF012885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53679.1"
                     /translation="MQVSLYDTTLRDGTQREGLSLSVEDKVKIARVLDGLGVDYVEGG
                     WPGSNPKDAEFFGRLARGGLSRAKVAAFGSTRRAGLRCADDPSIQALVAAETPVVTLV
                     GKSSTLHVEQVLETTREENLRMIGESVAFFRALGREVVYDAEHLFDGWRLDPAYALAT
                     LGAAADAGADWIVLCDTNGGSLPETVREVVGCIRERIRTPLGIHPH"
BASE COUNT          201 a          509 c          519 g          245 t
ORIGIN      
        1 gggaccgggg gtggtacttc gacctcctca agtacgatca ggccgcccgg acctcccgtc
       61 ccacccagac tcccgcgctc tccctggttt acgccttgga gcgccagctt gcacggatcg
      121 acgcagaggg aggcgtggag gcccgctggc ggcgccatcg cgcgatgctg gacgtcatgg
      181 agcgctgggc tgccgggcac ccggatttca ccctgctggc cccgcctggc cgccggtcct
      241 ggtccgtctc cgcgcttacc cctccgcatg gcctcaccgt gcccgaagtt ctgagcggga
      301 tgcgggcccg aggcttcacg ctcacgggcg ggctgggcga tctcgccgaa cgggtcatcc
      361 gcatcggcca catgggggat ctcgagccgg cgcatctcga ggcgatgctg ggcgagcttg
      421 ggcgggtcgg cctgtgaccc agcgcacagc aacggcttcg gaacgcctta ggttggctct
      481 tggcggtcgc gaggtccggc cggcaccggg ccgcgcaggg tgcaagccgc catctcttct
      541 gcacttattt cctctgtatt gcatatcctt cctgcccgga acgggcgccg caaggcgccc
      601 gcttcgtctt cctgtcccgc agcttgccgc cctccgggtg gccgccggcc attgacgccg
      661 aaggaaggct gcatagactt ccagccatgt gcatgagcgc ccgccgactc atcggtattc
      721 gtcccatccg gctcctctgg ggaggcggtg ggcgggtgcg cgactgacac gaagcgatcg
      781 gcgcaaaccg gacccacgcg gcctcccgac tcccgggagg ccgcggtgct tttggatacc
      841 tgttcccgga cggcccatgc aagtcagcct ctacgacacc accctgcgcg atggcaccca
      901 gcgggaagga ctttccctct cggtcgagga caaggtcaag atcgcccggg tgctcgacgg
      961 tctcggcgtg gactacgtcg agggcgggtg gccggggtcc aacccgaagg acgccgagtt
     1021 cttcggccgg ctggcgcggg gcggtctctc gcgggccaag gtggccgcct tcggcagcac
     1081 ccggcgcgcg ggcctgcgct gcgcggatga tccgagcatc caggccctcg tggcggcgga
     1141 gacgccggtg gtcacgctgg tcggcaagag ctccacgctc cacgtcgagc aggtgctgga
     1201 gaccacccgg gaggagaacc tccggatgat cggcgagagc gtggcgttct tccgggccct
     1261 cggcagggag gtcgtctacg acgcggagca tcttttcgac ggctggaggc tcgatcccgc
     1321 ctatgccctg gcgacgctcg gtgcggccgc ggatgcgggt gccgactgga tcgttctctg
     1381 cgatacgaac ggcggctcgc tgcccgagac ggtgcgcgag gtggtggggt gcatccgcga
     1441 gcggatccgg acgccgctgg ggatccaccc gcat
//
LOCUS       DATIFF010000342         1439 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1738183, whole genome shotgun sequence.
ACCESSION   DATIFF010000342 DATIFF010000000
VERSION     DATIFF010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1439)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1439)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1439
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1738183"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..692
                     /locus_tag="VLD58_04965"
     CDS             <1..692
                     /locus_tag="VLD58_04965"
                     /inference="COORDINATES: protein motif:HMM:NF017373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53680.1"
                     /translation="GGQQLVLVLPPLVGAALILLAGYFLARQVQRWVDDSLKRLDFNR
                     MAHAGGIDQLVERTGSRLDPIRALAKLIFWLVMLVVILLASAALGLESINQMFGTMLA
                     FLPTLIAAIVVVVLGMLVGEFVRGVILALGGNVAGVPTVAKLAKGAVVLISVFLALQQ
                     VGVDQEIVTAAFTLIVGAVALAAGLAFGLGNRELAGEITRRWYEQGQRRDRRKTDKKP
                     GAGADESQILD"
     gene            complement(735..>1439)
                     /locus_tag="VLD58_04970"
     CDS             complement(735..>1439)
                     /locus_tag="VLD58_04970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53681.1"
                     /translation="AGGATPVLAYDQDGFGYKTDYQEILGGAEPGHRVLPDSMSVLRF
                     ELATGRVDTVAELVAPEYGAAKFGEQVQQVAKIFGPNDVFGVLPDGRLWVARARENRV
                     DWRGPGGVWVQGKPHEFKPVPVTDADKQRVIAKIRQQGKGRGLPDTLPLEWPFAENKP
                     PFETGLGSPGGEVWLRRSPAQEDADAVYDVYGTDGAWKRAVTFPPGVTLAGFGGKGAV
                     YGILKAGEQRTVVRMR"
BASE COUNT          189 a          523 c          481 g          246 t
ORIGIN      
        1 tcggcgggca acagctcgtg ctcgtcctgc cgccgctggt cggggcggcg ctcatcctgc
       61 tcgccggcta cttcctggcc cggcaggtgc agcgctgggt ggacgactcg ctgaagcgcc
      121 tcgacttcaa ccggatggcc cacgccggcg gcatcgacca gctggtcgag cggaccggct
      181 cccgcctgga tccgatccgg gcactcgcca agctcatctt ctggctggtg atgctggtgg
      241 tgattctgct cgcgagcgcg gcgctgggac tcgagagcat caaccagatg ttcggcacca
      301 tgctcgcgtt cctgccgacg ctcatcgccg cgatcgtcgt cgtcgtcctg ggcatgctgg
      361 tgggcgagtt cgtgcggggc gttatcctcg cgctcggcgg gaacgtcgcc ggcgtcccca
      421 cggtcgcgaa gctggccaag ggcgcggtgg tgctgatctc ggtgtttctg gctctccagc
      481 aggtgggtgt ggaccaggag atcgtcactg ccgccttcac cctgatcgtc ggcgctgtgg
      541 cactcgccgc cgggctcgcg ttcgggctgg gcaaccgcga gctcgcgggc gagatcaccc
      601 ggcgatggta tgagcagggt caacggcggg accggcgcaa gaccgacaag aagccgggcg
      661 ccggtgcgga cgagtcgcag atactcgact gaacgggagg tgagaggtcg ttcctctcac
      721 ctctcaccta cctctcacct catcctcacc accgtccgct gctcccccgc cttcaggatc
      781 ccgtacaccg cccccttgcc gccgaatccg gccagcgtga cgcccggcgg gaaggtcact
      841 gcccgcttcc acgcgccgtc cgttccgtag acgtcgtaga cggcgtcggc gtcctcctgc
      901 gctggggaac gccggagcca gacctcgccc ccgggactgc ccaggccggt ctcgaagggc
      961 ggcttgttct cggcgaaggg ccactcgagc ggcagggtgt ccggtagtcc ccgccccttg
     1021 ccctgctgcc ggatcttcgc gatgacgcgt tgcttgtcgg cgtcggtgac cggaaccggc
     1081 ttgaactcgt gcggcttgcc ctgcacccat acgccgcccg gcccgcgcca gtccacgcgg
     1141 ttctcccggg cgcgcgccac ccacaggcga ccgtcgggca gcaccccgaa cacgtcgttg
     1201 gggccgaaga tcttcgcgac ctgctggacc tgctcgccga acttggcggc cccgtactcc
     1261 ggagccacca gctcggcgac ggtatccacc cggccggtgg ccagctcgaa acgcagcacg
     1321 ctcatgctgt ccggcagcac gcgatggccc ggctcggcgc ctccgaggat ttcctggtag
     1381 tcggtcttgt agccgaaccc gtcctggtcg taggccagca cgggcgtggc gccgcccgc
//
LOCUS       DATIFF010000343         3922 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_969811, whole genome shotgun sequence.
ACCESSION   DATIFF010000343 DATIFF010000000
VERSION     DATIFF010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3922
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_969811"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1766
                     /locus_tag="VLD58_04975"
     CDS             <1..1766
                     /locus_tag="VLD58_04975"
                     /inference="COORDINATES: protein motif:HMM:NF013316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3656 domain-containing protein"
                     /protein_id="HSB53682.1"
                     /translation="GCLKVEGRKKKPEYVATVTRGYRAFLDRLADGERTTPSPAEVQP
                     LVQIFSRGFTGGMYGGRAGRDYVTRDQPDNRGAELGRVLRNEGGELIVSVTQPIAAGD
                     GLGFEHPEGAAKGNTGFAVTRVHTLPHGRKGEILQAIQPAEQIASGWVVVRSSQAALL
                     AGARESYSAVHPVDGPRVRVDIRAWGTAGGTLTLEWKAAGEKVTVKSGTQLAPAAKHG
                     LDDERLRAQFGRLGETPFVLGVLDLAGLAPGLFLPISVLNDLRQEAVAELMTRREWAE
                     EARLAARAERIDAALAIETQTTPAGQRPRLIAEVWRLEDAEQAAQAGADEISLDLFLR
                     HPTPPVSRVRALVESLDARGKTLRLRTPTIVRPDERKVLDKWLALGTPLVSGHLGLVA
                     ELAAAGRSVVADYAVNCFNQHTAREIFRLGAERIVLSVELTGEEMSQVAAPWQGAGFE
                     VFVYGRPEGMTLEHCVLSAAFEREPETCRDLCVQKHPNVELTDPAGYVFPVATDSACR
                     NRLLHSRPVDGSEYLQPLWNAGFRNYRLVFNVPGDPVADVVATYRTMLDALAAGAPAD
                     THAIRQLTGRAFTRGHFARAV"
     gene            1813..3651
                     /locus_tag="VLD58_04980"
     CDS             1813..3651
                     /locus_tag="VLD58_04980"
                     /inference="COORDINATES: protein motif:HMM:NF036516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HSB53683.1"
                     /translation="MHARFSLPALGLLLAAGALPAQQARPVVSYEVAFPNAVHHEAEI
                     TLTATGLPRGVPAQLWMSRSSPGRYALHEFAKNVYRVRVTNGAGKELVATRPNPYAWQ
                     VAGHDGTVQVSYTLFGNLGDGTYAQIDLTHAHLNMPASFMWVKGLDARPIRVKFEPPA
                     GSNWKVASQLFPTADPFTFTAPGLQYFMDSPTELSNYTLREWTVTVAGKTWPIRLALH
                     HTGTEAEADSFAGLAKRVVEAHMAVYGEAPKYDVGYYTFIADYIPWGAGDGMEHRNST
                     IIASTSSLAKNMGGLLGTLSHEFFHSWNVERIRPRGLEPFDFTRANMSDGLWFAEGFT
                     NYYGPLAIARAGINTPADFAHGWSGPVSFVVNSPARAFFSPAEMSMQAPFVDAAAAID
                     PNNRSNTFISYYTWGSVVGLGLDLTLRTRGHTLDELMRLMWKRYGKTEISYTLADIEK
                     ALGDLTGDRAFAHDFFTRYVRGRDVVDYKALLANAGFLLRPAKPGTAFLGNLQADFSE
                     AGMTIRGSTQIGSPLYQAGLDAGDLITSMDGKLIASDSALQALRAEHKPGDVIEVGYQ
                     SRGMDRTTRVTFSEDPRLEVVTYEEAGMPLSDEMKKFREAWLTLPR"
     gene            3685..>3922
                     /locus_tag="VLD58_04985"
     CDS             3685..>3922
                     /locus_tag="VLD58_04985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53684.1"
                     /translation="MRALPLPAALAGGLLCLAAGAGVSQTPRPATIAGMSRSRLERIT
                     PIMQSAVDSGRIAGAVVLVLRHGQPVYQRAFGWSD"
BASE COUNT          612 a         1371 c         1340 g          599 t
ORIGIN      
        1 taggatgcct caaggtcgaa gggcggaaga agaagccgga atatgtggcg acggtgacgc
       61 ggggctaccg ggccttcctc gaccggctcg cggacggaga gcgcactacg ccttctccgg
      121 ccgaagtgca gccgctggtg cagatctttt ctcgcggctt caccggcggg atgtacggcg
      181 ggcgcgcggg acgcgactac gtcacccggg atcaacccga caaccgcggc gccgagctgg
      241 gccgggtgct tcgcaacgaa ggcggggagc tcatcgtctc cgtcacccag ccgatcgcgg
      301 ccggtgacgg cctcggtttc gagcacccgg aaggcgcggc aaaggggaac accggttttg
      361 ccgtcaccag ggtccacacc ctgccgcatg gccggaaggg cgagattctc caggcgattc
      421 agcccgcgga gcagatcgcc tcagggtggg tggtggtgcg gtcgtcgcag gcggcgctcc
      481 tggccggggc gcgcgagagt tacagcgcgg tgcacccggt cgacggcccg cgggtgaggg
      541 tcgatatccg ggcgtggggc accgcgggag gaacgctcac cctcgagtgg aaagccgcgg
      601 gcgagaaggt gaccgtgaag agcggcaccc agctcgcgcc cgccgccaag catggcctgg
      661 atgacgagcg actccgggct cagttcggcc ggctgggcga gacgcctttc gtcctcggcg
      721 tgctcgacct ggcgggcctg gcacccggac tgtttctgcc gatcagcgtc ctcaatgacc
      781 tccgccagga ggcggtggcc gagctgatga cccggcggga atgggcggaa gaagcgcggc
      841 tggcggcccg ggcggagcgg atcgacgctg cactcgcaat cgagacgcaa accacgccgg
      901 ccggtcagcg cccccggctc atcgccgagg tctggcgcct cgaggacgcg gagcaggcgg
      961 cgcaggccgg ggccgacgag atctcgctcg acctcttcct ccgccatccg acgccaccgg
     1021 tctcccgggt ccgggcgttg gtcgaatcgc tggacgcccg cggcaagacg ctcaggctcc
     1081 gcaccccgac gatcgtgcgg ccggacgagc ggaaggtgct cgacaagtgg ctggcgctgg
     1141 gcacgccgct ggtgagcggc cacctcgggc tggtggcgga gctcgccgcg gccggccgct
     1201 cggtggtcgc ggactacgcg gtgaactgtt tcaaccagca caccgcccgc gagatcttcc
     1261 ggctgggggc ggagcggatc gtgctgagcg tggagctcac cggcgaggag atgagccagg
     1321 ttgccgcccc gtggcagggc gccggtttcg aggtgttcgt ctacggccgc cccgagggaa
     1381 tgacactgga gcactgcgtg ctgtcggcgg cgttcgagcg ggagcccgag acctgccgcg
     1441 atctctgcgt ccagaagcac cccaatgtcg agctcaccga cccggccggt tacgtcttcc
     1501 cggtcgcgac cgattccgcc tgccgcaacc ggctgctcca ctcccgcccg gtggatggct
     1561 cggagtatct ccagccactc tggaatgccg ggttccgaaa ctaccggctg gtattcaacg
     1621 tcccgggcga tccggtggcc gacgtcgttg cgacctaccg gacgatgctc gacgcgctcg
     1681 ccgccggcgc cccggccgat acccacgcga tccggcagct caccggccgg gccttcaccc
     1741 ggggacattt cgcccgggca gtctgaggtc attcaccccg tcccgcccca cccttctcca
     1801 ggacatccgc tcgtgcacgc tcgcttttca ctgccggcgc tgggactcct gcttgccgcc
     1861 ggcgcccttc ccgcccagca ggcccggccc gtcgtcagct acgaagtcgc ctttcccaac
     1921 gcggtgcacc acgaggccga aatcaccctc acggccaccg gcctgccgcg gggcgtgccc
     1981 gcccaactct ggatgagccg gtcttccccg gggcggtacg cgctgcacga gtttgccaag
     2041 aacgtctacc gggtgcgggt gaccaacggc gccggcaagg agctggtggc gacccggccc
     2101 aatccctacg catggcaggt ggcggggcac gacggcacgg tgcaggtgag ctacaccctg
     2161 ttcgggaacc tgggtgacgg cacctacgcc cagatcgacc tgacccatgc ccatctcaac
     2221 atgcccgcca gcttcatgtg ggtgaagggt ctcgacgccc ggccgatccg ggtgaagttc
     2281 gagccgccgg ccggctccaa ctggaaggtg gcgagccagc tcttccccac ggccgatccg
     2341 ttcaccttca ccgcgccggg gctccagtac ttcatggaca gtcccaccga gctttcgaac
     2401 tacaccctgc gcgagtggac cgtcaccgtc gccgggaaga cctggcccat ccgcctggcg
     2461 ctgcaccaca ccggcaccga ggccgaggcc gacagcttcg cggggctggc gaagagggtg
     2521 gtcgaagcgc acatggcggt gtatggcgag gcgccgaagt atgacgtggg gtactacacc
     2581 ttcatcgccg actacatccc ctggggtgcg ggcgacggga tggagcatcg caactccacg
     2641 atcatcgcct cgaccagctc cctcgcgaag aacatgggcg gcctgctcgg caccctgtcg
     2701 cacgagttct tccattcctg gaacgtggaa cggatccggc cccgcggcct agagccgttc
     2761 gacttcaccc gggccaacat gtcggacggg ctctggttcg cggagggatt caccaactac
     2821 tacgggccgc tcgcgatcgc gcgggccggc atcaacacgc cggcggactt cgcccacggg
     2881 tggagcgggc cggtgagctt cgtggtgaac tcgccggcgc gggccttctt cagcccggct
     2941 gaaatgagca tgcaggcccc cttcgtcgat gccgccgccg cgatcgatcc caacaaccgc
     3001 tccaacacct tcatctcgta ctacacctgg ggcagcgtgg tgggcctggg gctcgacctg
     3061 acgctccgca cccgggggca cacgctcgac gagctgatgc ggctgatgtg gaagcgctac
     3121 ggcaagaccg agatttccta cacccttgcc gatatcgaga aggcgcttgg tgatctcacg
     3181 ggagaccgcg ccttcgccca cgatttcttc acccgctacg tccgcgggcg tgatgtggtg
     3241 gactacaagg cgctcctcgc caatgcaggg ttcctgctcc gcccggccaa accgggcacc
     3301 gcgttccttg gcaacctcca ggccgacttc agcgaggccg ggatgacgat ccggggctcc
     3361 acccagatcg ggagcccact ctaccaggcg gggctcgacg ccggcgacct catcaccagc
     3421 atggatggga agctcatcgc ctccgacagc gccttgcagg cgttgcgggc ggagcacaag
     3481 ccgggcgacg tgatcgaggt cgggtatcag tcgcgcggga tggaccgcac tacgcgggtg
     3541 acattctcgg aggatccgcg gctcgaggtg gtgacctacg aggaagcggg gatgcccctg
     3601 tccgacgaga tgaagaagtt ccgggaggcg tggctgacgc tgccgcgctg aggtagcttg
     3661 gtcgggtctc ccacccgagc ccccatgcgc gcccttccct taccggctgc cctcgccggt
     3721 ggtcttctgt gtcttgcggc cggcgcgggc gtctcgcaga cgccccggcc ggccaccatc
     3781 gccgggatgt cgcgctcgcg cctcgagcgc atcacaccga tcatgcagag cgcagtcgac
     3841 agcggccgca tcgccggggc ggtggtcctg gtgctgcggc acggccagcc ggtctaccag
     3901 cgcgcattcg gctggagtga cc
//
LOCUS       DATIFF010000344         1511 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1124132, whole genome shotgun sequence.
ACCESSION   DATIFF010000344 DATIFF010000000
VERSION     DATIFF010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1124132"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(215..541)
                     /locus_tag="VLD58_04990"
     CDS             complement(215..541)
                     /locus_tag="VLD58_04990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53685.1"
                     /translation="MKRVMTRDISFPVTSRHVLALLSVIAFGAGLVIVCRPEAHDRPA
                     YYDGDGDDVGIAEERQTLTVDAATVQTVVQLAPLFPPHREVAQDSGAGVHGSASRILR
                     SRAPPA"
     gene            complement(851..1498)
                     /locus_tag="VLD58_04995"
     CDS             complement(851..1498)
                     /locus_tag="VLD58_04995"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HSB53686.1"
                     /translation="MSLDELRPPLKPGERAPDFTLPRVDRDGTVSLADYRGRSPLLLG
                     LFRGVSCVFCRRAIAQLYPTADRLRALGVETLGIVATAPGDARLYFRYRPARLALAAD
                     PDLTTHRAYGLPRIELPWGAVQSTRINPTGELPEPLPVWDAVKALTRLDGDRPPETDR
                     EEMQRNWSQSAGEFLLDRGGIVRWAYVEYATGDLAGIGKFPTGEEILAAARMLST"
BASE COUNT          236 a          532 c          526 g          217 t
ORIGIN      
        1 cacccccggt cgcatgaacg cggcatggcc accccgccca cagcgcagac ggggacggcg
       61 gctgtcgccg cgccgtccga tcgtcccaag cagacacagt catcggttct ccatgctcgc
      121 gctccgcaat tgaaaatccg ggtgccgccg accctcagcg gcgacgccgc ctcggcgggg
      181 ccgcagcggc cttaggtcgg aacgctgacc gaggctacgc gggaggcgcg cgggatcgga
      241 ggatgcggga cgcggagccg tgcaccccgg ctccggagtc ctgggccacc tcacggtggg
      301 gagggaacag aggagcgagc tgaacgacgg tctggacggt cgcggcgtcg accgtcaggg
      361 tctgacgttc ctcggcgatc ccgacatcat cgccgtctcc gtcgtagtag gcaggccgat
      421 cgtgagcctc ggggcggcac acgatgacga ggcccgctcc gaaggcgatc acgctcagca
      481 acgccaagac gtgcctcgag gtgaccggga aggaaatatc gcgcgtcatg acgcgcttca
      541 tcgtaccacc actccgagcg gcccagggca gtggggtcac gaggccccca tcggttgccg
      601 gttcgacggt ccctcactcg caggaaggag cccgacgagg cgatccgctg gttcggaccc
      661 ggtccatgga tcgggcccac ggccgaatcg gccgcgggag acgcgtcccg agccttcgcc
      721 gtccggcggt gtcccgggcc gcgtggcgag cctcgaggct accgcccgcc gcggcccggc
      781 tccggcgggc ggcagcggcg cagacctgga tggtgcccag acggtggcgg ccgccatctg
      841 actgtctccc tcacgtcgag agcatccgcg ccgcggccag gatctcctcg cctgtcggga
      901 acttcccgat gccggccaga tctccggtgg cgtactcgac gtaggcccac cgaactatgc
      961 cgcctcgatc caacaggaat tccccggctg attggctcca gtttcgttgc atctcttctc
     1021 ggtcagtctc aggcggccgg tcgccatcca ggcgggtcaa tgccttgacc gcgtcccaga
     1081 ccggcaacgg ctccggcagc tcgcccgtcg gattgatgcg cgtggactgg acggcccccc
     1141 agggcagctc gatcctgggg agcccgtagg cccggtgggt agtgaggtcg gggtcggctg
     1201 ccaatgccag gcgcgccggg cggtaccgga agtagagccg cgcgtcgccc ggggccgtgg
     1261 cgacgatccc gagggtttcg accccgagcg cccgcagccg gtcagcggtc gggtagagct
     1321 gcgcgatcgc acggcggcag aacacacagg aaaccccgcg gaacaatccc aagagcagtg
     1381 ggcttctgcc ccggtagtcg gccagtgaca cggtaccgtc ccggtccacc cggggtagcg
     1441 tgaagtccgg cgcccgctct cctggcttga gcggaggccg cagttcatcg agactcatgc
     1501 cttcgattcc g
//
LOCUS       DATIFF010000345         1375 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2200102, whole genome shotgun sequence.
ACCESSION   DATIFF010000345 DATIFF010000000
VERSION     DATIFF010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1375
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2200102"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(79..282)
                     /locus_tag="VLD58_05000"
     CDS             complement(79..282)
                     /locus_tag="VLD58_05000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53687.1"
                     /translation="MKTAERGLRGWALIHNFAPSCPEVVRESPGLRSPAERLNGKRYH
                     PEWLQNLLISASLGGYRRLPRNA"
     gene            complement(279..1043)
                     /locus_tag="VLD58_05005"
     CDS             complement(279..1043)
                     /locus_tag="VLD58_05005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53688.1"
                     /translation="MTRNTVAFLRKFAVPFWALTEVFGRSPMYWHRLERSLGRFSLVG
                     TTVGSADRLPRHLAADEKHTTLADRKSRKVYLAATAGGGCCLGMALAETADADELTRA
                     YGVFRDESRDLDPEYRPEPVNTDGWAATQAAWQALFRGVTLILCFLHAFLKIRDRAVH
                     MKEGFTRLRERVWEAYHAPAARSFSQRLRRLREWAKAHVEKQVVREKVLASCSKRGRS
                     PGRTSTPAATGRVTWWTACCGDSITICIAVNTSTAR"
     gene            complement(1086..>1375)
                     /locus_tag="VLD58_05010"
     CDS             complement(1086..>1375)
                     /locus_tag="VLD58_05010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011646078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSB53689.1"
                     /translation="LAALVGLAPFADDSGTRRGGRHVRGGRAAVRRVLYLAALSAVRH
                     NPALSAFRDRLAARGKKAKVILTAVARKLLVVANAIIRTGRRWEPVLAMAR"
BASE COUNT          223 a          482 c          475 g          195 t
ORIGIN      
        1 atggcggcga aggagccgat cggtaggggg gtgacggagg cggcgtgcaa ggtgatcgtc
       61 aagcgaaggc tgtgctcatc acgcatttcg gggaagcctg cgatagccac cgagtgaggc
      121 cgagatcagc aggttctgga gccactcggg gtgataccgc ttcccgttga gacgctcagc
      181 cgggctccgc agccccggcg actcccggac gacctccggg cacgaggggg cgaagttgtg
      241 gatcagggcc cagccacgca gcccccgctc ggcggtcttc accgagccgt ggaggtgttg
      301 accgcaatac agatggtgat cgagtcgccg cagcaggcgg tccaccaggt tactcgtccg
      361 gtggcagccg gggtgctcgt acgcccgggc gaacgccccc gcttgctaca cgacgccagc
      421 accttctccc gaacgacctg cttctccaca tgggccttcg cccactcccg caggcgacgc
      481 aatcgttgcg agaacgaccg ggccgcgggg gcgtggtagg cctcccagac acgctctcgc
      541 agcctggtga acccctcctt catgtgcacg gcccgatctc ggatcttgag gaacgcatgg
      601 aggaagcaaa ggatcagcgt cacaccccgg aacagcgcct gccaggcggc ctgcgtggcg
      661 gcccaaccgt cggtgttgac gggctccggc cggtactccg ggtccaggtc tcgggactca
      721 tcccggaaca cgccgtaagc cctggtcaac tcgtcggcgt cggccgtctc ggccagggcc
      781 atccccaggc agcacccgcc gccggccgtg gccgccaggt agaccttgcg ggacttgcga
      841 tcggccaggg tggtgtgctt ctcgtcggcg gccaagtggc ggggcagacg gtctgccgac
      901 ccgacggtcg tcccgaccag gctgaaccgg ccgagcgagc gttccaggcg gtgccagtac
      961 atcggggagc ggccgaagac ttcggtcagg gcccagaagg ggacggcgaa cttgcggaga
     1021 aaagcgactg tgttccgtgt caaggcccga gggcccgtct gcgcgcggaa atcgcgcggt
     1081 gatcctcagc gcgccatcgc cagcaccggc tcccagcggc ggccagtccg gatgattgcg
     1141 ttggcgacga ccaacaactt ccgggcgacg gccgtcagga tcaccttcgc cttcttgccc
     1201 cgcgccgcca gccggtcccg gaaggcgctc agcgccgggt tgtgccgcac cgccgatagc
     1261 gccgccagat acagcacccg acgcacggcc gcccgtccgc ctcgcacgtg ccggccgccg
     1321 cggcgcgtgc cgctgtcatc ggcgaacggg gccaggccca ccagggcggc caact
//
LOCUS       DATIFF010000346         1238 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1124460, whole genome shotgun sequence.
ACCESSION   DATIFF010000346 DATIFF010000000
VERSION     DATIFF010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1238
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1124460"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(231..1076)
                     /locus_tag="VLD58_05015"
     CDS             complement(231..1076)
                     /locus_tag="VLD58_05015"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003953 - NAD+ nucleosidase activity
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HSB53690.1"
                     /translation="MDSDESPADRQRVGFFVSHAGRDQAWAEWLAWQLIEAGYTVELD
                     AWDWKPGQDFVARMQQALQRAERLLAVWSDAYFRSPFGRAELRAAFIRQARDEGRIVP
                     VLVEPSTVPDLYASLIYVDLVGLDEAAATARLRARLAGLRPSSPPRFPASEVSGATPK
                     PDRPVFAGRVPAVWNVPPRNPHFVGRTELLTELRQRLRSGEHTLVVQALHGLGGVGKT
                     QLAIEYAHRFAADYQLVWWIDAEQPALIAERPEHPGRQLQLGTTRNVSEAAVAVLAEL
                     RRRTP"
BASE COUNT          197 a          469 c          395 g          177 t
ORIGIN      
        1 cccagcccgg tcactcccgg cggggtcgcc gtgagcgtca tgcgtccagc tctcgcttcc
       61 aaaccggctc tccgcccttc cggtggggaa gggtgagcat ccaccaacct ccaatccact
      121 gcacgtcgtc cagcagcgcc agctgggcct gagcgctcac ccgcacggcg aacaccggct
      181 tgcctatgga gcgggccaga gtgagctcgg cgaagcacca gcgcgaggcc tcatggggtc
      241 cggcgacgca gctctgcgag caccgccacc gccgcttcgg agacgtttcg ggttgtgccc
      301 agttgcagct gtcggccagg gtgctcaggg cgctcggcga tcagcgccgg ctgctcggcg
      361 tcgatccacc agaccagctg gtagtcggcg gcgaatcggt gcgcgtactc gatcgccagc
      421 tgcgtcttgc ccactccccc tagcccgtgc agcgcctgca ccaccaacgt gtgctcaccg
      481 gagcgcagtc gctggcgcag ctcggtcagc agctcggtgc ggccgacgaa gtgcggattg
      541 cgcgggggca cgttccacac cgccggcacc cggccggcga acaccggcct gtccggcttc
      601 ggggtcgcgc cagacacctc ggaagccgga aaccgcggcg gcgacgaggg gcgtaggccg
      661 gccagccgag cccgcagccg ggccgtcgcc gccgcctcgt ccagcccgac cagatccaca
      721 tagatcagtg aggcgtatag gtccggcacc gtggacggct cgacgagcac cggcacgatc
      781 cgcccctcgt cccgagcctg ccggatgaac gccgcccgca gctccgctcg cccaaacgga
      841 gaccgaaagt aggcgtccga ccagaccgcg agtagccgct ccgcgcgttg taacgcctgc
      901 tgcatgcggg ccacgaagtc ctgccccggc ttccagtccc acgcgtccag ctcaaccgtg
      961 tagccggcct cgatcagctg ccaggcaagc cactccgccc aggcctgatc ccgacccgcg
     1021 tggctgacga agaagccgac gcgctggcga tccgccggcg actcgtcaga gtccatcccg
     1081 gaccacctcg ccacaaccac cctgtcgacg ctcagctgat tggctgattg tcatggatac
     1141 ccgtccgatc gacctggtcc gggtgcgtga gacatcctga gagctcgtcg gcgccgtgcg
     1201 gctactgggc ccgatccgtt cgcagccgat acctcgga
//
LOCUS       DATIFF010000347         3844 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_970459, whole genome shotgun sequence.
ACCESSION   DATIFF010000347 DATIFF010000000
VERSION     DATIFF010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3844
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_970459"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1188)
                     /locus_tag="VLD58_05020"
     CDS             complement(<1..1188)
                     /locus_tag="VLD58_05020"
                     /inference="COORDINATES: protein motif:HMM:NF012973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009306 - protein secretion [Evidence IEA];
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA];
                     GO_process: GO:0071978 - bacterial-type
                     flagellum-dependent swarming motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HSB53691.1"
                     /translation="MTAPSAAIGAVGSAGAGGISNAPRGKGAARAGGLAGETMLSRLS
                     GSAEIWLALAVVVIVALLIVPLPPMVLDALLAMSLATSILVLLVTLSIRDPLEFSIFP
                     SLLLLVTLLRLGLNVNSTRLILSHGHAGQVIAAFGNAVIGGNYVVGLVIFLILIVINF
                     MVITKGAGRIAEVAARFTLDAMPGRQMSIDADLGAGLIDEAEARRRREEIQRYADFYG
                     AMDGAAKFVRGDAIAGLLITGINLIGGFIIGITQQGMSATEALGTFTSLTVGDGLVTQ
                     IPALIVSTAAGIIVTYGAKSPSVGPAIAAQLTRHQQALWMSSAIIGLLGVVPGFPIVP
                     FFLLAAMLASVAWMVRGRDRDKKAGEPQALVQTKPAGPAEPAPIKDLLQVEPLEVEVG
                     YALV"
     gene            complement(1185..2273)
                     /gene="flhB"
                     /locus_tag="VLD58_05025"
     CDS             complement(1185..2273)
                     /gene="flhB"
                     /locus_tag="VLD58_05025"
                     /inference="COORDINATES: protein motif:HMM:TIGR00328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhB"
                     /protein_id="HSB53692.1"
                     /translation="MAGDDGQERTEAPTQKRRDEARKEGRVPRSQEISGATLLLAGTG
                     TLAAVGGAALATQAVHLLGTGAAHLTALPLSDSDVIRMLRELGRSALLAMLPFLLGVG
                     AITLLVNAIQARGVITIDPVMPKFSHIDPVSGLKRLFSIESLFAVLKAVLKLLVIGWV
                     AWLVFRGAWPRILSTSGAEVPTILGVTRALAIRLAFMVGLAFLVVAAIDYGFQIWQYE
                     KSLKMTKQEITQEFRESEGDPALKGRIRQLQRQMAKKRMMGKVATADVVVTNPTHIAV
                     ALKYDPLVAPAPIVVAMGERLLAQRIKELAYQAGVPVIENKPLARALFAGAKVGSPVP
                     PALYVAVAEVIAFVFGRKGKPLPVGRNR"
     gene            complement(2277..3074)
                     /locus_tag="VLD58_05030"
     CDS             complement(2277..3074)
                     /locus_tag="VLD58_05030"
                     /inference="COORDINATES: protein motif:HMM:NF013478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliR"
                     /protein_id="HSB53693.1"
                     /translation="MSPEILKLIGVGDWPAFVLVSARVAGFFLAAPLWSTVGLPKSIR
                     SAAAVLLSVILIPTVIPVAPIPDDMVAAAVMLGGETLMGVAIALTGAMFMHGVMVAGE
                     VASLQMGLSLGQAIGSLPEGATVGVGQLKGYFASLIYLSLGGHLTLYQALAASFAAVP
                     PGKAMLGVEGGRLVADLAGSVFSSGIRAAAPVMVALLLANLALAILGKAVPQLNVMML
                     AFPVTISIGMIALGASLPFLAAFVGGQIDALPDLLGRTIGAFHPAGQ"
     gene            complement(3071..3340)
                     /gene="fliQ"
                     /locus_tag="VLD58_05035"
     CDS             complement(3071..3340)
                     /gene="fliQ"
                     /locus_tag="VLD58_05035"
                     /inference="COORDINATES: protein motif:HMM:TIGR01402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HSB53694.1"
                     /translation="MSPGLAVQLVTRALMVALMVAAPLLLTALIVGVLVSLVQALTQI
                     QEQTLTFIPKLVAVSVVLLLAMPWMIRTLVQYIVAAFDLLPGMVG"
     gene            complement(3342..>3844)
                     /locus_tag="VLD58_05040"
     CDS             complement(3342..>3844)
                     /locus_tag="VLD58_05040"
                     /inference="COORDINATES: protein motif:HMM:NF013011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HSB53695.1"
                     /translation="TQTAPPGQLLVALAVLLTGVVMQPVINQANTEALQPYLNGQITQ
                     AQAYEKAVTPLRKFMLDNTREKDLGVFAELTGQEQADSVEALPTLTITAAFVTSELRT
                     AFQMGFVIFLPFVVVDLIVASVLMSMGMFMLPPVMISLPFKLMLFVLADGWSLVVQKL
                     VTGFQV"
BASE COUNT          652 a         1301 c         1350 g          541 t
ORIGIN      
        1 caccagggca tagcccactt ccacttccag cggctccacc tggagcagat ccttgatcgg
       61 cgccggctcc gccggaccgg cgggcttggt ctgcaccagc gcctgcggct cgcccgcctt
      121 cttgtcccgg tcccggccgc gcaccatcca cgcgacactc gcgagcatgg cggcgaggag
      181 gaagaacggc acgatcggga agccgggcac gactccgagc agcccgatga tggcggagga
      241 catccacagc gcttgctggt gccgggtcag ctgggccgcg atggccgggc cgacgctggg
      301 gctcttggcg ccgtaggtga cgatgatgcc ggcggcggtg ctgacgatga gcgcgggaat
      361 ctgggtgacc aggccgtcgc ccacggtgag actggtgaag gtgccgagcg cctcggtggc
      421 cgacatcccc tgctgggtga tgccgatgat gaacccgccg atcaggttga tcccggtgat
      481 cagcaggccg gcgatcgcgt cgccccggac gaacttggcg gcgccgtcca tggcgccgta
      541 gaagtcggcg taacgctgga tctcttcccg gcggcggcgg gcctcggcct cgtcgatgag
      601 gccggcgccg agatcggcgt cgatgctcat ctgccggccc ggcatcgcgt cgagggtgaa
      661 gcgggcggcc acttcggcga tacggccggc gcccttcgtg atcaccatga agttgatcac
      721 gatcaggatc aggaagatca ccaggccgac gacgtagttg ccgccgatca ccgcattgcc
      781 gaacgcggcg atgacctggc cggcatggcc gtggctcagg atgagccggg tgctgttcac
      841 gttgagaccg agccggagca gcgtcaccag caggagcagg ctcgggaaga tgctgaactc
      901 gagcgggtcc ctgatcgaga gcgtcaccag cagcaccagg atcgacgtgg cgaggctcat
      961 cgccagcaac gcatccagca ccatcggcgg gagcggcacg atcaggagcg ccacgatcac
     1021 caccaccgcg agcgccagcc agatctcggc cgagccgctc aggcggctga gcatcgtctc
     1081 gccggccagg ccgccggccc gggccgcacc cttgccgcgg ggggcgttgg agattccacc
     1141 ggctccggcc gaacccacgg cgccgatcgc tgcgctgggc gcggtcatct atttctcccc
     1201 accggaagcg gcttgccctt ccggccgaac acgaaggcga tgacctcggc cacggcgacg
     1261 tagagcgccg gcggcaccgg gctgccgacc ttggcgccgg cgaagagcgc ccgggccagc
     1321 ggcttgttct cgatgaccgg cacgccggcc tgataggcga gttccttgat gcgctgggcc
     1381 agcagccgct cgcccatggc gactacgatc ggcgccggcg ccaccagcgg gtcgtacttg
     1441 agggccacgg caatgtgggt cgggttggtg accaccacgt cggcggtggc gaccttcccc
     1501 atcatccgct tcttggccat ctgccgctgc agttgccgga tccggccctt gagcgcggga
     1561 tcaccttccg actcgcggaa ttcctgggtg atctcctgct tggtcatctt gaggctcttc
     1621 tcgtactgcc agatctggaa gccgtagtcg atcgcggcta ccaccaggaa cgcgagcccc
     1681 accatgaacg cgagccggat cgccagcgcc cgggttacgc ccaggatggt gggcacctcg
     1741 gccccgctgg tcgagaggat ccggggccac gcgccgcgga acaccagcca cgccacccag
     1801 ccgatcacca gcagcttgag caccgccttg agcaccgcga agagggactc gatgctgaag
     1861 agccgcttga gcccactgac cggatcgatg tgggagaact tgggcatcac cggatcgatg
     1921 gtgatgacac cccgcgcctg gatcgcgttc accagcaggg tgatggcgcc cacgccgagc
     1981 aggaacggca gcatggcgag gagggcgctc cggcccagct cgcgcagcat ccggatcacg
     2041 tcgctgtcgc tgagcggaag cgccgtgagg tgggccgctc cggtgccaag cagatgcacc
     2101 gcctgggtcg cgagggccgc gccgccgaca gccgcgagcg tgccggtgcc cgcgagcagc
     2161 agggtggcgc cggagatctc ctggctccgg ggtacccggc cttccttgcg ggcctcgtcc
     2221 cggcgcttct gcgtcggggc ttcagtgcgt tcctggccgt cgtcgcccgc catggcctat
     2281 tgccccgccg ggtggaaggc gccgatcgtg cggcccagga ggtcgggcag cgcatcgatc
     2341 tggccgccga cgaaggcggc gagaaacggc agcgacgcgc ccagcgcgat catcccgatg
     2401 gagatcgtga ccgggaacgc gagcatcatc acgttgagct ggggaacggc cttgcccagg
     2461 atcgcgaggg ccaggttggc gagcagcagc gccaccatca ccggcgcggc ggcccggatc
     2521 ccggagctga acaccgagcc ggccaggtcg gccaccagcc ggccgccttc gacgccgagc
     2581 atcgccttgc cgggcggcac cgcggcgaaa ctcgcggcca gcgcctggta gagggtgagg
     2641 tgcccgccga gcgagagata gatgagcgag gcgaagtagc ccttgagctg gcccaccccg
     2701 accgtggcgc cttcgggcag cgacccgatg gcctggccca gcgagagtcc catctggagc
     2761 gatgcaactt cgcccgccac catcaccccg tgcatgaaca tggcgccggt gagcgcgatg
     2821 gcgacgccca tcagggtctc gcctccgagc atcacggcgg cggcgaccat gtcgtcggga
     2881 atcggagcca ccgggatcac agtcgggatg aggatcacgc tgagcagcac cgcggccgcg
     2941 ctccggatgc tcttgggcag gccgacggtg gaccagagcg gcgccgcgag gaagaagccc
     3001 gcgacccggg cgctcaccag cacgaaggcg ggccagtcgc ccaccccgat cagcttgagg
     3061 atctcggggc tcatccgacc atgcccggca gcagatcgaa cgccgccacg atgtactgca
     3121 ccagggtgcg gatcatccac ggcatggcca ggagcaggac caccgagacc gcgaccagct
     3181 tggggatgaa ggtcagggtc tgttcctgga tctgggtcag cgcctgcacc aggctcacca
     3241 gcacgccgac gatcagcgcg gtgaggagga gcggcgccgc gaccatcagg gcgaccatga
     3301 gggcacgggt gaccagctgc accgcgaggc cgggagacat gctagacctg gaacccggtg
     3361 acgagcttct ggaccacgag gctccagccg tcggccagca cgaagagcat cagcttgaag
     3421 ggaagcgaga tcatcaccgg cgggagcatg aacatgccca tgctcatcag caccgaggcg
     3481 acgatcaggt ccaccaccac gaagggcagg aagatcacga agcccatctg gaaggcggtg
     3541 cggagctcgc tggtcacgaa cgcggcggtg atcgtgagtg tcggcagcgc ttccacgctg
     3601 tcggcctgct cctgcccggt cagctcggcg aagaccccga gatccttctc gcgggtgttg
     3661 tcgagcatga acttccggag cggcgtgacg gccttctcgt aggcctgcgc ctgggtgatc
     3721 tggccgttga gatagggctg gagagcttcg gtgttggcct ggttgatcac cggctgcatc
     3781 acgacaccgg tgagcagcac cgcgagcgcc accagcagct ggccgggggg ggcggtctgg
     3841 gtcc
//
LOCUS       DATIFF010000348         5565 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_970477, whole genome shotgun sequence.
ACCESSION   DATIFF010000348 DATIFF010000000
VERSION     DATIFF010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5565
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_970477"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..296)
                     /gene="rplM"
                     /locus_tag="VLD58_05045"
     CDS             complement(<1..296)
                     /gene="rplM"
                     /locus_tag="VLD58_05045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019394039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HSB53696.1"
                     /translation="MKTYQATAQDRERNWYVVDAQGKTLGRLATQIADVLRGKRKPTY
                     TPHVDVGDFVIVVNAEKIAVTGKKREDKRYWRHSGYPGGIRFRTLGDLLEQRPE"
     gene            374..1543
                     /locus_tag="VLD58_05050"
     CDS             374..1543
                     /locus_tag="VLD58_05050"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSB53697.1"
                     /translation="MEGERLAASVSYRDVTKRYPGQSEPAITDLSLQVPAGEICVLVG
                     PSGCGKTTAMRMVNRTVEITEGDILIGDTSVRDRDPADLRREMGYVIQQIGLFPHRSV
                     ADNIATVPKLLGWDRERTWNRVRELLDVIGLDRELGDRFPSQLSGGQQQRVGVARALA
                     ADPPVMLMDEPFGAIDPINRERLQNEFLRLQAEIQKTVLFVTHDIDEAIKMGDRIAIL
                     KDGGRLAQYATPAELLMAPADGFVEDFVGADRALKRLALMRVRDIDLWEAPLAFVGQS
                     TAEVRAKLDGAEVPHALVVDSERRPLGWLSESDLRADTVPQNPDSGPEPVLELDDVMR
                     DALSDLLQTETQYAPVTDAGGRIAGVLSVEIISEFLVSPEAKVEEHAAVERPLGE"
     gene            1540..2280
                     /locus_tag="VLD58_05055"
     CDS             1540..2280
                     /locus_tag="VLD58_05055"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB53698.1"
                     /translation="MSAALAQYAPLIGQVTIHNRTGGNASCVAQNKAFCFGWAIDNFD
                     RYTTPLLNHLFLVLVAVAIGFAVAFTMALLSHGRRWLVPTFTGATGILYTIPSLAFIF
                     LLLPITGLGWTTAIIVLSVYTLQIIYRNIIAGLANVPPESKEAGRGMGMTDRQLLWRV
                     ELPLALPEIIAGLRIATVSTVAIASLMVFANVNTLGAPLYQQIDFKTNIVIAGGLTIL
                     MAIAFDLLLLVAQRLLAPWRRSSREATL"
     gene            2373..3005
                     /locus_tag="VLD58_05060"
     CDS             2373..3005
                     /locus_tag="VLD58_05060"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB53699.1"
                     /translation="MGGPHQALHLVGQHLKVTFLALGAATAVALPTGVILGHLHKGEA
                     FAISLGNAGRAVPELALIAFVAAFIGVGLINVTFAFAVLGIPPILTNAYVGISQVDRN
                     AVEAARGMGMRGLQIIFRVELPLAVPTIMAGVRTGAVNIIATVALASLAGVSTLGDYI
                     LGRNVYGDAGVVAGAILIALLTLGLELGLAGVQWLLTPRGLKLARAGAAA"
     gene            3062..4048
                     /locus_tag="VLD58_05065"
     CDS             3062..4048
                     /locus_tag="VLD58_05065"
                     /inference="COORDINATES: protein motif:HMM:NF015995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter
                     substrate-binding protein"
                     /protein_id="HSB53700.1"
                     /translation="MTGHSRLRATFALLAALVVAVSVAACGGGDNNNDTGTSGGNSAN
                     LIKSNPANQGIQLTVGSKNFTEEYILGNIYAQALQAAGYDVKTNLNLGSEQIAYKALQ
                     DGQISGYPEYTSTLLTSIFGKEANQVPADAQQAYEQAKAELEPKGETAFTPTPFADAN
                     ALGMLKTKADELGVTKISDLQGKSQDLNLYGSPECRQRVDCLVGLQNVYGLQFASFNP
                     VDIGLRYTVLDKGQADASIVFTSDAQLSANPDKYVLLQDDKGIFPSGNVIWVTDQSTV
                     QKAGPDYAATIEKVQKGLTLPVMQELNARVDIDKQDPAAVATQYLKEDGYIQ"
     regulatory      4136..4289
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00379"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-AMP (ydaO/yuaA leader) riboswitch senses
                     the signaling molecule cyclic di-AMP; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="cyclic di-AMP"
                     /db_xref="RFAM:RF00379"
     gene            4284..4883
                     /locus_tag="VLD58_05070"
     CDS             4284..4883
                     /locus_tag="VLD58_05070"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HSB53701.1"
                     /translation="MRSAVIDKPVGRTPRRRVQFIAALALAMAVLGSQVAFAQSGGVG
                     APGTTTTTTTAPTTTPAPTGAMVFPVAGPHTFGQGVGAPRSGHTHQGQDIMAACGTPL
                     VSVTRTKVKWVSFQSAAGNYVVLRNKKLHQDYMYAHLAARAAVTKGQVLQPGQQLGIV
                     GQTGDATACHLHFELWLGKWYRGGHPVDPMPYLQTYQGY"
     gene            4939..5535
                     /locus_tag="VLD58_05075"
     CDS             4939..5535
                     /locus_tag="VLD58_05075"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HSB53702.1"
                     /translation="MRSRRSIPAIVAVALAAAVLAAPASATQQYRYPLSGPHNYGNLD
                     VTGFGVKRGDGSIHTGQDIIARCGTPIVAAHSAVVKSAGYSAGYGNYVVLTGQGTRFD
                     FVYGHMKGRSRVGVRRTVKAGQRIGSVGSTGTDSGVCHLHFEIWKGRWFAGGSRTDPL
                     PHLRAWDKRSGGPLEQEPKPPPGQYSTASTRLFYDSAE"
BASE COUNT          915 a         1971 c         1830 g          849 t
ORIGIN      
        1 tcctcggggc gctgctcgag caggtcgccc agggtgcgga agcgaatgcc gccgggatag
       61 ccgctgtgcc gccagtagcg cttgtcctcg cgcttcttgc cggtcaccgc gatcttctcg
      121 gcgttgacga cgatcacgaa gtccccgacg tcgacgtggg gtgtgtaggt cggcttgcgc
      181 ttcccgcgga gcacgtccgc gatctgggtc gccaggcggc cgagtgtctt gccctgggcg
      241 tcgaccacgt accagttccg ctcgcggtcc tgggcagtcg cctggtaggt cttcatcgct
      301 gtcgccgtag ccataaaaag agccgcgcac caatccgcgg ccggcggatg atagcgccgg
      361 taggatcgcc gcagtggagg gcgagcgcct cgcagcttcc gtttcttaca gggacgtcac
      421 caagcgatat ccgggccagt ccgagccggc gatcaccgac ctttcgctcc aggtgccggc
      481 gggggagatc tgcgtattgg tcggcccgtc aggttgcggc aagaccacgg cgatgcggat
      541 ggtcaaccgc accgtcgaga tcaccgaggg cgacatcctg atcggcgaca cctccgtccg
      601 tgaccgggac cccgcggacc tgcgccggga gatgggctac gtgatccagc agatcgggct
      661 cttcccgcac cgcagcgtcg ccgacaacat cgcaacggtg ccgaagctgc tcggctggga
      721 ccgggagcgc acctggaatc gcgttcggga gctcctcgat gtgatcggcc tcgaccgcga
      781 gttgggcgac cgcttcccga gccagctctc cggcggccag cagcagcgcg tcggggtcgc
      841 ccgggccctc gccgccgacc cgccggtgat gctgatggac gagccattcg gcgcaatcga
      901 cccgatcaac cgggaacgtc tccagaacga gttcctccgc ctccaggccg agatccagaa
      961 gaccgttctc ttcgtcaccc acgacatcga cgaggcgatc aagatgggcg accggatcgc
     1021 gatcctgaag gacggcggcc gcctcgccca gtacgccaca cccgccgagc tcctgatggc
     1081 gccggccgac ggcttcgtgg aggacttcgt cggggccgat cgggcgctga agcgtctcgc
     1141 gctgatgagg gtgcgcgaca tcgacctctg ggaggccccc ctcgccttcg tcggtcagtc
     1201 gaccgcggag gtcagggcca agctcgacgg cgccgaagtc ccgcatgcgc tggtggtcga
     1261 ctccgaacgg cggccgctcg gctggctctc cgaatccgac ctgcgggcag acacggtccc
     1321 gcagaacccc gacagcggcc cggagcccgt cctggagctg gacgacgtga tgcgcgacgc
     1381 gctctcggac cttctccaga ccgagactca gtacgcgccg gtgacggacg ccgggggtcg
     1441 aatcgccggc gtgctctccg tcgagatcat ctccgagttc ctcgtctcgc ccgaggcgaa
     1501 ggtcgaggag cacgccgcgg tcgagcggcc gctgggcgaa tgagcgccgc cctcgcccag
     1561 tacgccccgc tgatcgggca ggtcacgatc cacaaccgga ccggcggcaa cgccagctgc
     1621 gtggcacaga acaaggcttt ctgcttcggc tgggcgatcg acaacttcga tcgctacacc
     1681 acccccctcc tcaatcacct gttcctggtg ctggtcgcgg tcgccatcgg cttcgcggtg
     1741 gcgttcacga tggccctcct ctcgcacggc cggcgctggc tggtccccac cttcaccggc
     1801 gccaccggga tcctgtacac gatcccgtcg ctcgccttca tcttcctgct cctgccgatc
     1861 accggcctcg gctggacgac ggcgatcatc gtcctcagcg tctacaccct ccagatcatc
     1921 taccggaaca tcatcgccgg actcgccaac gtcccgcccg agagcaagga ggcggggcgc
     1981 ggcatgggaa tgaccgatcg ccagctgctc tggcgcgtcg agctgccgct ggcgttgccg
     2041 gagatcatcg cgggactccg catcgccacc gtctcgacgg ttgccatcgc cagcctgatg
     2101 gtcttcgcga acgtcaacac cctgggcgcg cctctctacc agcagatcga cttcaagacc
     2161 aacatcgtga tcgccggcgg gctgacgatc ctgatggcga tcgcgttcga cctgctcctc
     2221 ctcgtcgccc agcgcctgct ggcaccctgg cggcggtcat cgagggaggc gaccctctga
     2281 ccacgttcat ccacctcggg ttcctgagcg ccttcacaga cgcgttcaac ttcatcttcc
     2341 atcagcagga ggcgcggacc ggggacacgc tggtgggagg cccgcaccag gcgctgcatc
     2401 tcgtcggcca gcacctcaag gtcacgttcc tggcgctggg cgccgcgacc gcggtcgcgc
     2461 tgcccacggg ggtgatcctc ggtcacctgc acaagggcga ggccttcgcc atctccctgg
     2521 gcaacgccgg ccgagcggtg ccggagcttg cgctgatcgc cttcgtggcg gcgttcatag
     2581 gcgtgggtct gatcaacgtc accttcgctt ttgcggtgct ggggatcccg ccgatcctca
     2641 ccaacgcgta tgtcggcatc agccaggtgg accggaacgc ggtcgaggcc gcccgcggga
     2701 tgggcatgag gggcctgcag atcatcttca gggtggagct gcccctggcg gtgccgacga
     2761 tcatggccgg ggtgcggacg ggggcggtga acatcatcgc gacggtcgcg ctggcgtcac
     2821 tcgccggggt gagcacgctg ggcgactaca tcctgggccg gaacgtgtac ggcgacgccg
     2881 gggtggtggc gggggcaatc ctgatcgccc tgctcacgct cgggctggag ctcggtctcg
     2941 cgggcgtgca gtggctgctg acgccacgcg gcctgaagct cgcgcgcgcc ggcgccgcgg
     3001 cataggatca cgcggtccaa tccaggggtg cagcaacccc agacgagagg agagtctcgt
     3061 ggtgaccggc cattcgcgac tgagggcgac gttcgcgctg cttgcggcgc tggtcgtagc
     3121 cgtcagcgtc gccgcttgtg ggggcggcga caacaacaac gacaccggga cgagcggggg
     3181 caactccgcc aacctgatca agtccaatcc cgccaaccag gggatccagc tcacagtcgg
     3241 ttcgaagaac ttcaccgagg agtacatcct cgggaacatc tatgcccagg cgctgcaggc
     3301 cgcgggctat gacgtgaaga ccaacctcaa cctgggttcc gagcagatcg cctacaaggc
     3361 gctgcaggac ggccagatca gcggctaccc ggagtacacc tcgacgctcc tcacctccat
     3421 cttcggcaag gaggcgaacc aggttcccgc cgacgcccag caggcatacg agcaggccaa
     3481 ggcggagctc gagccgaagg gcgagacggc cttcacccca acgccgttcg cggacgcgaa
     3541 cgcgctgggc atgctgaaga ccaaggccga cgagctcggg gtcacgaaga tctccgacct
     3601 tcagggcaag tcgcaggacc tgaacctcta cggctcgccg gagtgccggc agcgggtgga
     3661 ctgcctggtg ggcctgcaga acgtctacgg cctccagttt gcgtcgttca acccggttga
     3721 catcgggctt cgctacacgg tcctcgacaa gggccaggcg gacgcctcga tcgtcttcac
     3781 ctcggacgcc cagctgtccg ccaacccgga caagtacgtc ctgctccagg acgacaaggg
     3841 gatcttcccc tcggggaacg tcatctgggt cacggatcag tcgacggttc agaaggccgg
     3901 acccgactac gccgcgacga tcgagaaggt ccagaagggc ctcaccctgc cggtgatgca
     3961 ggagctgaac gcccgggtcg acatcgacaa gcaggacccg gccgccgtcg cgacgcagta
     4021 cctgaaggag gacggctaca tccagtagcc gccctcacgt gggagggcgg agccgggacg
     4081 accggctccg cccgaccaat tgcacgtcac ctcctggtgt ctggctatac tgccgcgcca
     4141 gcaaaggcca aatccctccg gcacgccgga gggaacgggg gacccgcagg ggttcatccc
     4201 caaggggcga atcgcaacca actggttcgt agcgccgctc tcaggcgcga gcccgccagc
     4261 taactccgta ggccgcatgg agagtgcgaa gcgcagtgat cgacaagccg gttggtcgta
     4321 cgccccgcag gcgggtgcag ttcatcgctg ccctcgccct ggcgatggcg gtactcggct
     4381 cgcaggtcgc cttcgcgcag agcggcggcg tcggcgcacc cggcaccacc accaccacca
     4441 cgaccgcgcc caccacgacg ccggctccga ccggggcgat ggtcttcccg gtggccgggc
     4501 cccatacgtt cggacagggc gtgggcgccc cacgcagcgg tcacacccac cagggccagg
     4561 acatcatggc cgcctgcggc acgccactgg tctcagtgac ccgcacgaag gtgaagtggg
     4621 tgagcttcca gagcgccgcg ggcaactacg tggtactccg caacaagaag ctccaccagg
     4681 actacatgta cgcgcacctc gcggcgcgcg ccgcagtcac gaagggccag gtcctgcagc
     4741 ccgggcagca gctcggcatc gtcggccaga cgggtgacgc gaccgcctgc cacctccact
     4801 tcgagctctg gctcggcaag tggtatcgcg gcggccaccc ggtcgatccg atgccctatc
     4861 tgcagaccta ccagggctac taggccccgg gtcacgccgg ctgctacaac gggcccggtt
     4921 gtgtgttcca gcctgggcat gcgcagtcgc cgatcgatcc cggccatcgt cgccgtggcg
     4981 ctcgcggccg cggtgctcgc ggctccagcc tccgcgaccc agcagtacag gtatccgctc
     5041 agcgggccgc acaactacgg caacctcgac gtcaccggct tcggcgtgaa gcgcggcgac
     5101 ggctcgatac acaccggcca ggacatcatc gccaggtgcg gcaccccgat cgtcgccgcc
     5161 cactcggcgg tggtgaagtc cgcgggctac tccgccgggt acggcaacta cgtcgtgctc
     5221 accggccagg ggacccgctt cgacttcgtc tacggccaca tgaagggccg ctcgcgggtc
     5281 ggcgtccgcc gcacggtcaa ggccgggcag cgcatcggct cggtcggcag caccgggacc
     5341 gacagcggcg tctgccacct ccacttcgag atctggaagg ggcgctggtt tgcgggaggc
     5401 agccggacgg atcccctccc ccacctgcgc gcctgggaca agcgctctgg aggcccgctg
     5461 gagcaggagc cgaagccgcc gcccggccag tactcgaccg cgagcacgcg gctcttctac
     5521 gacagcgccg agtagccgac ggccgccgct attcccattc gatcg
//
LOCUS       DATIFF010000349        20903 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_815750, whole genome shotgun sequence.
ACCESSION   DATIFF010000349 DATIFF010000000
VERSION     DATIFF010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 20903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20903
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_815750"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            239..1084
                     /locus_tag="VLD58_05080"
     CDS             239..1084
                     /locus_tag="VLD58_05080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53703.1"
                     /translation="MRLSAILLALSLPTPLLAQGLHLIPGVREIESDSIRDIAVAAVD
                     ADRPVVYYNPVMANRYGPLLTRFFLAHEYGHIQYHHTRAGLADLADSTRESIFRAQEL
                     AADCYAASLAGDDARAATEAALRFFSRLGPFRFDAEHPTGAQRAARILMCLPGPRPTV
                     VYGRGETGVEVGPVSGEPDRVLFEVTTEDLARRFGGNAVLWLDGQRVGQLSNLRFPRT
                     MSVDQFGAGIHTYRIEVEVFDLEQNPSGRLSGRGHVLIQNGDRFRIVWSGGETPQLVR
                     EDSGK"
     gene            complement(1085..4336)
                     /locus_tag="VLD58_05085"
     CDS             complement(1085..4336)
                     /locus_tag="VLD58_05085"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSB53704.1"
                     /translation="MATHLLPEHFPVRPGSRVAAATTIAGYFGRVLVLAAACAIASYA
                     GARAFGAGITAPIWPSIGVAIAGLLLLGARYWPGVTVGVFLGSVVLPGDLAVVVVGAF
                     GSTLTSLLPVLVLPRLGWGDFRFERTWDVVRYVVVAGFLAPTLGALAMSGLFLLYTLA
                     DPLRVLASFYFAGVAGALLVGPLVLTWLGPAPSFSPSAQRSELLAMVGGLVVAALLTD
                     WSWTFYFVTIFPLLAWAGLRTGPRGASLMSFALFLVCVWAVSDKLVTDPNSYAQRAFL
                     GGITITQGITSLLLATMVIERRRANRDERTIEGAYRTLVAAAPFAVVGVDREGRVTVW
                     SSAAERMFGWTAQEVAGRRLPIIPEHRTDESERLIANQAEGVNGLETVRRRKDGAELD
                     ISLTAWPVFDGEGRLSGVMEVHQDITERKRAGRLQQATYRVSEAALAALDLEQLYGAI
                     HEIVAGLMSARNLSIALYDPDTDRLSFPYWSDERATQPGVRQAGKGLTEYVLRSGRPL
                     RDLSGTISGLTARGEIEPFTTLATDWLGVPLKARGHTIGVLAVQSYETGACYTDRDQA
                     ILEFVSIQVGMAIERKGAEDRVRASERELRALFAAMRDVIQVLDQNGTYLRIAPTSPG
                     LLPAPAAELLGRRLVDVHPPEVAARFLSLVRTTLASGQPSTIEYPLTIQGQEIWFSAV
                     VSPLEANTVLWVARSINEQKQAEEALHRSEEQLRQAVKMEAVGRLAGGVAHDFNNLLT
                     SVLGHADLALKRVPSSDPLHDDLVEIMSAGSRAAALTQQLLAFSRKQVLEPRIVDLNA
                     TVTTIARMLRRTIGEDIELETRLAPELGAVRADPVQMEQVILNLAVNARDAMPLGGQL
                     LIETSNQELPGGAAIRVTVTDTGMGMSEEVRAHIFEPFFTTKEMGKGTGLGLATAYGI
                     VKQSGGTISVTSSPGKGSTFLVDLPRVRGEAVTEERRPASLPGGGSETILLVEDEDAV
                     RNLIRRVLELHGYKVLTAPSGEAALEVSRLHGGPLHLLLTDVVMPGISGPKLAERLLV
                     ERPSVRIVLMSGYAATTLEQKILLDPASSFLQKPFTSELLMRRVREVLDQVRH"
     gene            complement(4314..5483)
                     /locus_tag="VLD58_05090"
     CDS             complement(4314..5483)
                     /locus_tag="VLD58_05090"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HSB53705.1"
                     /translation="MSDPIRFLTALGQALSATNLYRSGHPAREKALDQAFQQLDALQK
                     LDPAPSFTFLEEEVLYRQQALRDFKAWDWAKRLAKAGVQRVEFDKEVSRDDLSEFLSD
                     VQKRVTSGEIDTSEVRQLRRPSIRFGMVSIRGASADVAVEVAETISIPYTLDDEIETV
                     GWIHGEVEASESLPLAEANAVVRSLSLAMHSQSRMMMPLLALKNYDQYTTTHATNVSV
                     LSMALAEFIGLGPRDVREFGIAGLLHDLGKVRVPKEILVKPGALTESELAALRRHPID
                     GARLIIAREQKLDLAATVAYEHHIMINGHGYPRFRYARDTHFASKLVHVCDVFDALCT
                     ARPYREAWAAEMALAYIEERAGVDFEASLAEGFTGMMRLWANQRIVMPDGDTPLT"
     gene            complement(5480..7555)
                     /locus_tag="VLD58_05095"
     CDS             complement(5480..7555)
                     /locus_tag="VLD58_05095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53706.1"
                     /translation="MAELTTASPEQERAVLPRDVAVFLPLLGIALHKITAYPEKHPLL
                     SNAIDAVSGHLRAVLVNRPFLLIGIARSQLLVEGLATDPDNPVLRELSQKLHRHQIGA
                     IKFTPGVTQAEITDMLRLLSGDARTAPAGAKLDELEERWEHVRLFPPAYDRIELAAGE
                     QHLGEQATKRTASESLVGRLWMGLAAAAVAKEGAPELHTDPRAIAQALNEQLRDGEQA
                     KRVVSILLGLSRELRLSHGGEAVMLKERLSTLLNHITPDTLKELATLGADLAQRRKLV
                     VDAAMVLPAGAVLTLLRSVSDAGEQAIPHAMVRLLTKLAFQAEKGAPSIREEADLALR
                     EGVRQLVDRWSLADPNPAAYGRMLERLSRHPTTGGAQSAEPQPAEAIRLVQISLETDT
                     VGEAVWSALEELVREGRAAEVVKMVEDPAVADDIAEHYWNRLATPNNMRILLSNEPRD
                     TEVVELLLERMGMAAAEPMLESLEVADNRTIRRRLLTRLGKLGPSIAPMLIERLPGAP
                     WYVQRNLLALLGSLPEIPADFPVAEYAAGEDPRVRREAIKLLLRLQGHRDEAIIAAVG
                     DDDDTNVRLGLSAALEGCPPAAVGRVRMLLNDRKLSLELRIMAIRVIGTVRTAATRDW
                     LVNQALTQPNWFKKRKLMPKSHELLTVIGCLARSFRQDPTAQLALRLAWESNDPDIRT
                     AATGVIEDQ"
     gene            complement(7704..8267)
                     /gene="efp"
                     /locus_tag="VLD58_05100"
     CDS             complement(7704..8267)
                     /gene="efp"
                     /locus_tag="VLD58_05100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HSB53707.1"
                     /translation="MGIIASEMRKGMTLLFEGEPVRVLDFHHHTPGNLRAMVQAKLRK
                     LRTGTQFEHRFRSTDTVEVADLETHTLEFLYAGGDSYHFMNTENFDQLEMSEDDLGDS
                     AKWVAPGMKIIAEFFNGRPIGIQLPNAMVFEVVETNPVMKTATKTSSFKPAKLDNGVM
                     INVPEFIQTGEKVRVNPTTGDYIDRAK"
     gene            8403..9674
                     /locus_tag="VLD58_05105"
     CDS             8403..9674
                     /locus_tag="VLD58_05105"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HSB53708.1"
                     /translation="MSSRRAFVGALAGAAFLPSMRPDALTRVFSLPQGPGAPDDEDYW
                     AEIQRAFDCDRTLVNLNNGGCSPTPSHVLEQMIRDLKFSNELPVIHMWQTLEPRIESV
                     RRELARSFGCDPEEMAITRNASEANETMIFGLDLKAGDEVIVTNQNYGRMITSWDQRV
                     RRDGIVLKQVSFKLPPPSQDYILEQFKAAVTPRTRVIEVTHITNLSGHIMPVRELVRW
                     ARPKGIEVFVDGAHAYAHFPFTRDELECDYYGTSLHKWLLAPIGTGFLYVRRNRQKRL
                     WPLMAAPASMDENIRKYEEIGTHPAANHNAISVALAFHNAIGAERKIGRLRYLRDRWA
                     KRLLQESDRVKILTPLDSPYGAGIGLLHIDGLGPNELVPWLMDKHRIVATGITHAEFN
                     GVRVTPNVYTTTQEVDLFAEKVLEAIRHGVT"
     gene            9683..10162
                     /locus_tag="VLD58_05110"
     CDS             9683..10162
                     /locus_tag="VLD58_05110"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSB53709.1"
                     /translation="MGTDSTEAHTALIERFYSAFARRDHQTMAACYGQDAEFSDPVFT
                     HLRGSEVGGMWRMLCERGTDLRLAYRDIIANASTGSAHWEAWYTFSATGRPVHNIIDA
                     HFEFAGGLIQRHQDRFGLYRWARQALGLKGLLLGWAPPVQGAIRSQARRALTRFLSP"
     gene            10159..10725
                     /locus_tag="VLD58_05115"
     CDS             10159..10725
                     /locus_tag="VLD58_05115"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HSB53710.1"
                     /translation="MTFETGEPQTLPELGQALNRVVAEGVSFLAPMSDTVFFAPQGPA
                     WSPAEHVRHLRKSSAPLVTALKLPQLVVRLRFGGRSGPSRTFAQLRELYLGKLAAGGG
                     AGRFAPSQEPFPANPVDRRNEIINGWTAVTVELVNAMNRWSETALDRHQLPHPLLGPL
                     SVREMLAFTVYHSAHHFRRIDERSRAGV"
     gene            10722..11216
                     /locus_tag="VLD58_05120"
     CDS             10722..11216
                     /locus_tag="VLD58_05120"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB53711.1"
                     /translation="MSTIRPGRAADAPALLALLPELADFPLPAWRTASQVANADAGIL
                     LAAITRDDQTSCVLVAEDPDGSVAGFIFSTTRQDYFTGKPHTHIEVIVVRQDARGRGL
                     SRRLIDATEAWARARGHSNVTLNVFATNQRAGAVYQRLGYEPETVHYIKPLNLAATRG
                     ELDP"
     gene            11213..11374
                     /locus_tag="VLD58_05125"
     CDS             11213..11374
                     /locus_tag="VLD58_05125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53712.1"
                     /translation="MKWLISLVAGSLGGALGWWLGNLEGVMTGFFLSVIGTAVATYYA
                     KRMIDEYLP"
     gene            11458..12162
                     /locus_tag="VLD58_05130"
     CDS             11458..12162
                     /locus_tag="VLD58_05130"
                     /inference="COORDINATES: protein motif:HMM:NF039614.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase-related protein"
                     /protein_id="HSB53713.1"
                     /translation="MDHARAVRQHDAYARLLRELGAEVERVPADPEQPDAVFIEDTAV
                     VLDELAVVTRPGAASRRGETAPVAARLERERRLVRLEAPATLDGGDVIVAGRKVFVGQ
                     TTRTNAAGLAALNAALAPAGYDVIGVPVTGCLHLKSAATAAAPGVILFNPHWVDAGSF
                     QGYDTVAVHPEEPSAANVLRVGEVLVQDAAYPRTRKRLLERGLTVRMVDLSELAKAEG
                     AVTCCSLIVSRGSRYV"
     gene            12185..12532
                     /locus_tag="VLD58_05135"
     CDS             12185..12532
                     /locus_tag="VLD58_05135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53714.1"
                     /translation="MRRAMLLLILLAGCERRQEKSHGDRALDSAATVPTPATSSPLPI
                     PIDSTISWDRMERLIRSAPDSLRAVQQLHTRAVTALFKDGRRYHATEPRIDAVIHLLK
                     EVDPAGRVLIATE"
     gene            12532..13182
                     /locus_tag="VLD58_05140"
     CDS             12532..13182
                     /locus_tag="VLD58_05140"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase family protein"
                     /protein_id="HSB53715.1"
                     /translation="MRVLLVHGLGRTPLSLQGLARTLRRSGHVTRSFGYYAFAEHYDQ
                     IRQRLASELRAMAREQDPVALVGHSLGGLLLRHALSDAPGLNVHRLIMLGTPNQPPRL
                     AVRAKRWLPFRVFARSCGHLLATPSAFARIPPPAVPYTLIAGTMGWRRIPGPFGGEPN
                     DGLVAVSETMVRDGDEPHLLPISHTFMMNDRRLRQLVLELLTTGDDPSHSEDDRDA"
     gene            13205..13516
                     /locus_tag="VLD58_05145"
     CDS             13205..13516
                     /locus_tag="VLD58_05145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53716.1"
                     /translation="MVTLRSSLRTIDEQLGTGSLTPDRVEDIKSAVDDIRFRLWGVMT
                     ASTPAEYQAFRERFRLRRATEICHGLALDIAEQRLTPTHREAAELRAALQGLLARLPA
                     D"
     gene            13556..14152
                     /locus_tag="VLD58_05150"
     CDS             13556..14152
                     /locus_tag="VLD58_05150"
                     /inference="COORDINATES: protein motif:HMM:NF025380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HSB53717.1"
                     /translation="MAIGWRTLALAGVVLIAAIYGVRTATGGWQSLFGRRTTVTHEVA
                     LGRLESVGKLVTTEAGLRDIVVYQDTRLGSTKKSLVVVTGKALVGIDLKHGASIDIDE
                     TARRIRITVPHARLIGVDIASLKTYDESRGLWNWFKPEDRDEIFGLAHDQLRAAARDM
                     AVVEHAEQGARALLGALFAGDGYTVDVVFTPAVTPPAD"
     gene            14173..14985
                     /locus_tag="VLD58_05155"
     CDS             14173..14985
                     /locus_tag="VLD58_05155"
                     /inference="COORDINATES: protein motif:HMM:NF024779.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4105 domain-containing protein"
                     /protein_id="HSB53718.1"
                     /translation="MRKPVLLLLGALAAVGLVSWSLFTPSHDRHWSTDQSVLPTVEFH
                     GDSALIHGVRNFRWTSATAFEPAWEDRSYRLDQVATAWYVLVPFSKAWRGPAHAFVSF
                     GFDDGRYLAVSVEARREVGETYGALKGLFRRFELIYVVGDERDLIGRRSVYDGTDVYL
                     YPVKADRAGARAMLTGMLERVNQLHDRPEFYNTITNNCTLNLVHHVNQIVPGRIPSSW
                     RIILPGYSDAVAQALGLIDSAGTLAEIRQRFRINDRARTALDSADFSRLIRQ"
     gene            14998..15603
                     /locus_tag="VLD58_05160"
     CDS             14998..15603
                     /locus_tag="VLD58_05160"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003213515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HSB53719.1"
                     /translation="MASIYDLKPKFQALLRPVVGSLAGAGVTANQVTVAAALLSLATG
                     GAIARWPGSPRVLLLVPLVLFVRMALNAIDGMLAREHNQKSRLGAVLNELGDVVADSA
                     LYLPLALVAGIDARLVVAAVVIAVIAEMTGVVAIQIGAARRYDGPMGKSDRAFWFGLL
                     TLLLGLGVAPGWWSLALVSLIALLGLVTIFNRARRALETES"
     gene            15600..16517
                     /locus_tag="VLD58_05165"
     CDS             15600..16517
                     /locus_tag="VLD58_05165"
                     /inference="COORDINATES: protein motif:HMM:NF013327.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HSB53720.1"
                     /translation="MSGPGLSRQVWMVLGGILALLVIASLVSWYLARTGPEGKYRELR
                     QRVQSWWIMVGVFGVAIAIDRSLSIIFFGLVSFLALKEYLSLIPTRRADRRVLFWAYL
                     SIPVQYYWIYRGWYGMFIVFIPVWVMLLISARMVLIGETKDFLRAVGTIQWGLMLMVF
                     AISHQAYLLVLGGAGLVLYLVVLTQLNDVAQYVWGKTFGRHKATPTVSPGKTLEGLIG
                     GIVTTTALSYFLAPLLTPLDRWDSLAAGFLISTGGFLGDITISALKRDLGVKDSGQLI
                     PGHGGILDRIDSLTYTAPLFFHFLRFYYY"
     gene            16654..17295
                     /locus_tag="VLD58_05170"
     CDS             16654..17295
                     /locus_tag="VLD58_05170"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HSB53721.1"
                     /translation="MIRILRVCFFALIVRAVTLIVLGLNVRHRERLPRRGPAVLAANH
                     NSHLDTVVLMSLLPLALLPRVRPVAAADYFLRNRLLAWFALNIIGILPIARHRSDPSV
                     DPLLPIVEALDRGEILIFFPEGSRGEPEQLAEFKSGIARLQERRPEVPVIPVFMHGLG
                     KVLPRGETLLVPFFVDVFVGNPVAWTGDRHAFMESLRGAISALAAEGHFTPWE"
     gene            17301..17753
                     /locus_tag="VLD58_05175"
     CDS             17301..17753
                     /locus_tag="VLD58_05175"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB53722.1"
                     /translation="MSELVIRPATAADLDALAPLFDGYRRFYEQPGDLALARKFLGER
                     LARMDTVIFLAELAGVAAGFTHLFPIFSSTRCQRLWLLNDLFVDANARGHGVARALLR
                     AAEHHARATGACGLELATAHTNTPAQRLYESLGWQLDTTFRHYELPTN"
     gene            complement(17756..18202)
                     /locus_tag="VLD58_05180"
     CDS             complement(17756..18202)
                     /locus_tag="VLD58_05180"
                     /inference="COORDINATES: protein motif:HMM:NF024297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSB53723.1"
                     /translation="MRPLSLALTLALVSTASLHAQTAADSAGIRAAALDYAEGWFEGN
                     ADRMARAVSPELVKRIVVRDTASGKDMIQGMGSTVLVNSTRRGFGKSTPADKQEKDVR
                     IYDIFRGAAIAKVTMTDWIDYLQLARVDGRWVIVNVLWERKTGPMH"
     gene            complement(18329..19081)
                     /locus_tag="VLD58_05185"
     CDS             complement(18329..19081)
                     /locus_tag="VLD58_05185"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HSB53724.1"
                     /translation="MIRVVIADDEPLARERIRTLVAAHGDLSLVAECGDGEETLRVLL
                     AERPDVVFLDVQMPELNGFEVLEALPAELRPSVIFITAYDEHAVRAFDVNAVDYLLKP
                     VEVRRFEAALAKVRERRGQPPAASQAALEAVLAELRRARGHASRLVVRDGSRVTFVRT
                     EEIDWIDAAGNYARLHVGRAVHLLREPLKVLATRLDPERFLRVHRSAIVNLERITSVE
                     PYFHGEYTLTLKDGTRLTSSRTHSARLRSLLR"
     gene            complement(19078..20151)
                     /locus_tag="VLD58_05190"
     CDS             complement(19078..20151)
                     /locus_tag="VLD58_05190"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HSB53725.1"
                     /translation="MRSTARWWVFGAIAWTVLALLSASQWAVSLAADGKPIFWGPLLI
                     NRLADWYSCAIFTPLFFWLARRFPIERQRWLPHVALNFGSALVLTPLKFAIQHWVMAD
                     LLRQNFPPLTQMLTHAFISETIAFWCVIAAVHALVFQQRVREREALTARLRVRLSEAQ
                     LDALSARLHPHFLFNTLQGISTLVYRDPAAADAMLGHLSTLLRRALGRGQGHEVPLSE
                     ELTLLDEYLAIVQLRFGDRVRITRNIDPAALPGLVPQLLLQPLVENAIEHGIARRAGA
                     GAITIAARREGTALTIAVSDDGPGLVEPRPEGVGLGSTRLRLEELYGSDGRLTLESGA
                     GFTVTVVVPYHEQPVLLAAEPVA"
     gene            complement(20228..>20903)
                     /locus_tag="VLD58_05195"
     CDS             complement(20228..>20903)
                     /locus_tag="VLD58_05195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53726.1"
                     /translation="DPRIYRGYALEVSDGTGGLDTVAFTGGNQKIPNRDYVVSLATPE
                     WQRFSANGFFLMGQDENFQEWASAEIIFADFGLTFRPTSQLRIEARYRQNQYKRRSDR
                     TLVARQRVPRLKLEYQIARPLFIRLVGEYNTFEQDALRDEQRTFAPILRFSPALGDYV
                     KTTAFSDNRFRGDVLVSFTPVPGTVFFAGYGSSLFEPESFKFRDFRRESDGFFLKASY
                     LFRVGS"
BASE COUNT         3270 a         7244 c         6938 g         3451 t
ORIGIN      
        1 cgaccggagc ttcgacaacg agcatcccac cgggaccacc cgggcggcga ggatcctgag
       61 ctgcatgccg aagtaggcgg actggcggca cggcggcaaa gcagtcagtg gttccttgcg
      121 aaacagaccc tccggcgccc gctggagggt tactcatttc tggccgcctt gccgccttgc
      181 cgctttgccg ccttgccgcc tgtcttgccg ccttgccgcc tgaccccaag attgtcccat
      241 gcgcctctcc gccatcctcc tggctctctc cctccccacc ccgctcctgg cgcagggcct
      301 ccacctcatt cccggggtcc gggagatcga gagcgacagc atccgggata tcgccgtcgc
      361 cgcggtcgac gccgaccgtc cggtggtgta ctacaacccg gtcatggcga accgctacgg
      421 gccgctcctg acccgtttct tcctggccca cgaatacggt catatccagt atcaccacac
      481 ccgcgccggc ctcgccgacc tcgccgactc tacccgagag tcgatcttcc gggcccagga
      541 actcgcggcc gactgctacg ccgcctcgct cgcgggggac gatgcccgcg ctgccaccga
      601 ggcggccctc cgcttcttct cccgcctcgg gccgttccgg ttcgatgccg aacacccgac
      661 cggcgcgcag cgcgccgcgc ggatcctcat gtgcctcccg ggacctcggc ccacggtggt
      721 ctatggccgg ggagagaccg gagtggaagt cggaccggtg agtggcgaac ccgaccgggt
      781 gctgttcgag gtaacgaccg aggacctggc ccgccggttc ggtggcaacg cggtcctctg
      841 gctcgacggc cagcgggtgg ggcagctctc caacctgcgc ttcccccgga ccatgtcggt
      901 cgaccagttc ggcgccggga tccacaccta ccgcatcgaa gtcgaggtct tcgacctgga
      961 gcagaatccc agcggccggc tctccggccg cgggcatgtg ctgatccaga acggtgaccg
     1021 cttccggatt gtatggtctg ggggagaaac gccgcagctg gtgagagaag acagcgggaa
     1081 atgatcagtg ccggacctgg tccagcacct cccgcacccg ccgcatcaac agctccgagg
     1141 tgaatggctt ctgcaggaag gatgacgccg gatccagcag gatcttctgt tccagcgtcg
     1201 tggccgcgta tcccgacatc aggacgatcc gcaccgaggg ccgctctacc aggagccgct
     1261 cggccagctt ggggccgctg atcccgggca tgaccacgtc ggtgagcagc aggtggagcg
     1321 ggccgccgtg cagccgcgat acctcgagcg ccgcctcgcc gctcggggcg gtgagcacct
     1381 tgtagccgtg cagctccagc acccggcgga tcaggttccg caccgcgtcc tcgtcctcca
     1441 ccagcaggat cgtctcgctg cccccgcccg gaagcgacgc cggccggcgt tcttccgtga
     1501 cggcctcgcc ccgtacccgc ggcaggtcaa ccaggaaggt gctccccttt cccggtgagc
     1561 tggtcaccga aatcgtgccg ccgctctgct tcacgatgcc gtacgccgtc gccagtccca
     1621 gcccggtgcc cttccccatc tccttggtgg tgaagaaggg ctcgaagatg tgggcccgga
     1681 cctcttcgct catgcccatt ccggtgtcgg tcacggtgac ccggatcgcc gcgccgcccg
     1741 gcagctcctg gttgctggtc tcgatcagga gctggccgcc cagcggcatc gcgtcgcgcg
     1801 cgttgacggc gaggttgaga atgacctgct ccatctgcac cgggtccgcc cgcaccgcac
     1861 ccagctccgg ggcgagccgg gtctcgagct cgatgtcctc gccgatggtg cgccgaagca
     1921 tcctggcaat ggtggtcacc gtggcgttga ggtccacgat cctcggctcc aggacctgct
     1981 tccggctgaa ggcgagcagc tgctgggtca gcgcggccgc ccgggacccc gccgacatga
     2041 tctcgaccag gtcatcgtgc aacggatcac tcgagggtac ccgcttgagc gccaggtcgg
     2101 cgtgccccag caccgaggtg agcaggttgt tgaagtcgtg ggctacgcca cccgccaggc
     2161 gcccgaccgc ctccatcttc accgcctgcc ggagctgctc ctcgctccgg tggagcgcct
     2221 cctccgcctg cttctgctcg ttgatgctcc gcgccaccca gagcacggtg ttcgcctcga
     2281 gcggcgatac tactgcgctg aaccagatct cctgcccctg gatcgtgagc ggatactcga
     2341 tggtcgaggg ctgcccgctc gcgagggtgg tccgcaccag gctcaggaac cgggccgcca
     2401 cctcgggcgg gtgcacgtcc accagccgcc ggccgagcag ctccgcggcc ggcgccggca
     2461 gcagacccgg actggtcggg gcaatccgga gataggtccc gttctggtcc agcacctgga
     2521 tgacgtcgcg catcgcggcg aagagcgccc ggagctcccg ttccgaggca cggacccggt
     2581 cctccgcccc cttccgctcg atcgccatcc cgacctggat cgagacgaac tcgaggatcg
     2641 cctggtcccg gtcggtgtaa caggcgccgg tctcgtaact ctggaccgcc agcacgccga
     2701 tggtgtgccc gcgggccttg agcggcacac ccagccagtc ggtggcgagg gtggtgaacg
     2761 gctcgatctc accccgcgcc gtgaggccgc tgatggtgcc gctgaggtca cgcagcggcc
     2821 gtccgctccg aagcacgtat tccgtgaggc ccttgccggc ctggcgcacg cccggctggg
     2881 tggcgcgctc gtccgaccag taggggaagc tcaggcgatc ggtgtcgggg tcgtacagcg
     2941 caatgctcag gttccgcgcc gacatgaggc ccgccacgat ctcgtggatc gcgccgtaga
     3001 gctgttccag gtcgagcgcg gccagggccg cctcggagac ccggtaggtg gcctgttgca
     3061 gccggccggc ccgcttccgt tcggtgatgt cctggtgcac ctccatcacg ccggacagcc
     3121 gtccttcgcc gtcgaacacc ggccaggcgg tgagcgaaat atccagctcg gctccatcct
     3181 tccggcgccg gaccgtttcg agcccgttca ccccttcggc ctggttggcg atgagtcgct
     3241 cggactcgtc ggttcgatgc tccggaatga tggggagcct ccgccccgcc acttcctgtg
     3301 ccgtccagcc gaacatccgc tccgcggcac tgctccagac cgtcacccgg ccttcgcgat
     3361 ccacacccac gacggcaaac ggcgctgccg ccaccagggt acgatacgcg ccctcgatgg
     3421 tccgctcgtc gcggttggcg cggcggcgct cgatgaccat cgtcgccagc agcaaactgg
     3481 tgatgccctg ggtgatggtg atccctccca ggaaagcccg ctgggcatag gagttgggat
     3541 cggtgaccag cttgtcgctc acggcccaga cgcaaaccag gaacagcgcg aacgacatca
     3601 gcgatgcgcc ccgggggccg gtccgtagcc ccgcccacgc caggagcgga aagatcgtga
     3661 cgaagtagaa cgtccacgac cagtcggtca ggagggccgc gacgaccagc ccgccgacca
     3721 tcgccagcag ttcggatctc tgtgcgctgg ggctgaaaga cggggctggc ccgagccagg
     3781 tgaggaccag tggtccgacc agcagggcgc ccgccacgcc ggcgaaatag aaggaggcaa
     3841 ggacccgcaa cgggtctgcc agcgtgtaca gcaggaacaa gcccgacatg gccaaggcgc
     3901 ctaaggtggg cgccaggaat ccggcgacga cgacgtaacg caccacgtcc caggtccgct
     3961 cgaagcggaa atcgccccag cccagccgcg gcagcaccag taccgggagc agtgacgtga
     4021 gggtggagcc gaacgcaccg acgactacta cggcgaggtc cccgggcaga acgacggagc
     4081 cgaggaatac gccaaccgtc accccgggcc agtaccgggc acccagaagg aggagacccg
     4141 cgatggcgac accgatggat ggccagatcg gcgcggtgat ccccgcaccg aatgcccggg
     4201 caccggcata ggaagcaatg gcgcaggccg cggcgaggac cagcacccgt ccgaaatagc
     4261 cggcgatggt ggtcgccgcc gcgacccggg acccgggacg caccgggaaa tgctcaggta
     4321 agaggtgtgt cgccatcagg catcacgatc cgctgattgg cccacagccg catcatgccg
     4381 gtgaatcctt cggccagact ggcttcgaag tccacgccgg cccgctcctc gatgtaggcc
     4441 agggccatct cggcagccca ggcctcccga taggggcggg cggtgcacag cgcgtcgaac
     4501 acatcgcaga cgtgcaccag tttgctggcg aagtgggtgt cgcgggcata ccggaaacgg
     4561 ggatacccgt gtccgttgat catgatgtga tgctcgtatg ctaccgtagc ggccaggtcc
     4621 agcttctgtt cccgcgcgat gatgagccgg gctccgtcga tcgggtgccg ccggagcgcc
     4681 gccagctccg actcggtgag cgccccgggc ttcaccagga tctccttcgg gacccgcacc
     4741 ttgcccaggt cgtggagcaa ccccgcaatg ccgaactccc gcacatccct gggccccagg
     4801 ccgatgaact cggccagcgc catcgaaagg accgagacgt tggtcgcgtg agtcgtggtg
     4861 tactggtcgt agttcttgag cgccaggagc ggcatcatca tccggctctg gctgtgcatg
     4921 gccagcgaca gcgagcgcac caccgcgttg gcctccgcca gcggcagcga ctcggacgcc
     4981 tccacctcgc cgtggatcca ccctacagtc tcgatctcgt cgtcgagggt gtagggaatc
     5041 gaaatggtct ccgccacttc cacggctacg tcggccgagg cgccccggat gctgaccatg
     5101 ccgaagcgga tcgagggacg gcggagctgg cggacttcac tggtgtcgat ctcacccgac
     5161 gtgacccgct tctggacgtc gctcaggaat tccgagaggt cgtcgcggga gacctccttg
     5221 tcgaactcga cccgctgtac cccggccttg gccagccgct tggcccagtc ccacgccttg
     5281 aagtcgcgca gcgcctgctg ccggtagagt acttcctctt ccaggaaggt gaagctgggc
     5341 gcggggtcga gcttctggag cgcgtccagc tgctggaagg cctggtccag cgccttctcg
     5401 cgtgccggat ggccgctgcg gtagagattg gtagcggaga gggcctgccc cagggccgtc
     5461 aggaagcgga tcggatcgct cactggtcct cgatcacgcc agtggcggcg gtgcggatgt
     5521 cggggtcgtt gctttcccag gccagccgga gcgcaagctg ggcggtcggg tcctggcgga
     5581 aggagcgcgc caggcacccg atgaccgtga gcagctcgtg gctcttcggc atcagcttcc
     5641 gtttcttgaa ccagttgggc tgggtcagcg cctggttgac cagccagtcg cgggtcgcgg
     5701 cggtgcgcac cgtcccgatc accctgatgg ccatgatccg gagctcaagc gaaagcttcc
     5761 ggtcgttgag gagcatgcgc acccgcccca cggcggcggg cggacaccct tccagcgcgg
     5821 cgctgaggcc gaggcggacg ttggtgtcgt catcgtcacc cacggcggcg atgatcgctt
     5881 cgtcgcggtg gccctggagc cggagcagga gcttgatcgc ctcgcgccgc acccgcgggt
     5941 cttcgcccgc ggcgtactcc gccaccggga agtcggccgg gatctccggc agcgaaccga
     6001 gcagcgccag caggttccgc tgcacgtacc acggggcgcc cggcagtcgt tcgatcagca
     6061 tcggcgcgat cgaggggccc agcttgccga gccgggtgag gagccggcgg cggatggtgc
     6121 ggttgtccgc cacttccagg ctctccagca tcggctccgc cgccgccatg cccatgcgct
     6181 cgagcagcag ctcgaccact tccgtgtcgc gtggctcgtt gctgagcagg atccgcatgt
     6241 tgttgggcgt ggcgagacgg ttccagtagt gctccgcgat gtcgtccgcc accgcgggat
     6301 cttccaccat cttcaccact tcggcggccc gtccctcgcg gaccagctct tccagggccg
     6361 accagaccgc ctcaccgacg gtgtcggtct cgagggagat ctgcaccagc cggatcgcct
     6421 ccgccggctg gggctcggcc gactgggcgc ccccggtggt ggggtgacgg gagagccgtt
     6481 ccagcatccg gccgtaggcc gcgggattgg ggtcggccag gctccagcgg tccaccagct
     6541 ggcgtacccc ctcacgcagc gcgaggtctg cctcttcccg gatcgacggc gcgccctttt
     6601 ccgcctgaaa ggcgagcttg gtgaggagcc ggaccatcgc gtggggaatc gcctgctcgc
     6661 cggcatcgga gaccgaccgc aacagggtga gcaccgcgcc ggcgggcagc accatggcgg
     6721 cgtccaccac cagcttccgc cgctgggcca gatcagcgcc cagggtggcc agttccttca
     6781 gggtgtcggg cgtgatgtga ttgaggagcg tggagagtcg ctccttgagc atcaccgcct
     6841 cgcctccatg tgaaagccgc agctcccgcg acaggcccag gaggatgctg accacccgct
     6901 tggcctgctc gccatcccgc agctgttcgt tgagcgcctg ggcgatggcc cggggatcgg
     6961 tgtgaagttc gggagcgcct tccttcgcga ctgccgcggc ggcgaggccc atccacagcc
     7021 gtccgaccag gctctcgctg gcggtgcgct tggtggcctg ttcacccagg tgctgctcgc
     7081 cggcggcgag ctcgatccgg tcgtacgccg gagggaagag gcgcacatgc tcccagcgct
     7141 cctccagctc gtccagcttc gcccccgccg gcgcggtccg ggcatctcca ctcaggaggc
     7201 ggagcatgtc ggtgatctcg gcctgggtca ccccgggcgt gaacttgatg gcgccgatct
     7261 ggtgacggtg gagcttctgc gacagctcgc gcagcaccgg gttgtccggg tcggtggcca
     7321 ggccttcgac caggagctgg ctgcgggcga taccgatcag caggaagggg cggttgacca
     7381 gcaccgcccg aaggtgtccg gaaaccgcgt cgatcgcatt ggagaggagc gggtgctttt
     7441 ccggatacgc ggtgattttg tgcagggcaa tgccgagcag cggcaggaag accgccacgt
     7501 cacgcggaag taccgcgcgt tcctgttcag gtgaggcggt ggtgagttcg gccactcggc
     7561 tcagaggggg gagtcgatct taaactaatg gtgcgcattg gggttgggcc agccagcgag
     7621 gtggattgcc cgcggagggc ccccctgaaa acggaaccgg gccgccccgg cagggcgacc
     7681 cggcgtatcg aggcgaaacg ggctcacttc gcccggtcga tatagtcccc ggtggtcggg
     7741 ttgacccgga ccttctcccc ggtctggatg aactcgggca cgttgatcat gaccccgttg
     7801 tccagcttgg ccggcttgaa cgaggaggtc ttggtggcgg tcttcatgac cgggttggtc
     7861 tccaccacct cgaataccat tgcgttaggc agctggatcc cgatcggccg gccgttgaag
     7921 aactcggcga tgatcttcat ccccggcgcc acccacttgg ccgaatcgcc gagatcgtct
     7981 tcgctcatct ccagctggtc gaagttctcg gtgttcatga agtggtagga atcgccgccg
     8041 gcatagagga actcgagggt atgagtctcg agatccgcca cctcgaccgt gtcggtggac
     8101 cggaaacgat gctcgaactg agtccccgtc cgaagcttgc gcagcttggc ctgcaccatg
     8161 gcgcggaggt ttcccggcgt atgatgatgg aagtcgagaa cccggaccgg ctccccctcg
     8221 aacaggagag tcatgccctt ccgcatttca ctcgcgatga tgcccatggt accgatgccc
     8281 agacgttgag ttttttgccc ttgtgccggg cacaaggata gaggaaggca tggtctggcg
     8341 gtaggggcgc agacgcctac attatgaaag tccatcaaag tccttttctg gccgaggctt
     8401 acatgtcgag tcgccgggcg tttgtggggg cactggccgg ggcggcgttc ctgccgtcga
     8461 tgcggcccga tgcgttgacg cgggtcttct ccctccccca aggcccgggg gccccggatg
     8521 acgaggacta ctgggccgag atccagcggg cgttcgactg cgaccgcacc ctggtcaacc
     8581 tcaacaacgg cggctgcagc cccaccccca gccatgtgct ggagcagatg atccgggacc
     8641 tcaagttctc caacgagctc ccggtgattc acatgtggca gaccctggaa ccccggatcg
     8701 agagcgtccg gcgggaactg gcccggagct tcgggtgcga tcccgaggaa atggccatca
     8761 cccggaacgc ctccgaggcc aacgagacca tgatcttcgg cctcgatctc aaggccggcg
     8821 acgaggtgat cgtcaccaac cagaactacg gccggatgat cacctcctgg gaccagcggg
     8881 tccgccgcga cgggatcgtg ctcaagcagg tttccttcaa gctcccgccc ccgtcacagg
     8941 actacatcct cgagcagttc aaggccgccg tcacgccgcg cacccgggtc atcgaggtca
     9001 cccacatcac caacctctcc ggccacatca tgccggtgcg ggagctggtc cgctgggccc
     9061 ggccgaaggg gatcgaggtc ttcgtggacg gggctcacgc ctacgcccac ttcccgttca
     9121 cccgggacga gctggagtgc gactactacg gcaccagcct ccacaagtgg ctcctggcgc
     9181 cgatcgggac cggattcctc tacgtccgca ggaaccggca gaagcggctc tggccactca
     9241 tggcggcgcc ggccagcatg gacgagaaca tccgcaagta cgaggagatc ggcacccacc
     9301 cggcggccaa ccacaacgcc atcagcgtgg ccctcgcctt ccacaacgcc atcggcgccg
     9361 agcggaagat cggccggctc cgctacctcc gcgaccgctg ggccaagcgg ctcctgcagg
     9421 agagcgaccg ggtgaagatc ctcaccccgc tcgattcccc ctacggcgcg gggatcggcc
     9481 tgctgcacat cgacgggctc gggcccaacg aacttgtgcc gtggctcatg gacaagcacc
     9541 ggatcgtcgc caccgggatc acccatgccg agttcaacgg ggtccgggtg accccgaacg
     9601 tctacaccac cacccaggaa gtcgacctct tcgccgagaa ggtgctggaa gcgatccggc
     9661 atggagtgac ctgaccgccc ggatggggac tgacagcacc gaggcgcaca ccgcgctcat
     9721 cgagcggttt tactcggcct ttgcccgccg ggatcaccag accatggcgg cgtgctacgg
     9781 gcaggacgcg gagttcagcg atccggtctt cacccacctc cgcggctctg aggtcggtgg
     9841 aatgtggcgg atgctctgcg agcggggcac cgacctgcgc ctggcgtacc gcgacatcat
     9901 cgccaacgcc tccaccggct cggcccactg ggaagcgtgg tacaccttct cggccaccgg
     9961 ccggccggtc cacaacatca tcgacgcgca cttcgagttc gccggcggcc tgatccagcg
    10021 gcatcaggat cgcttcgggc tctatcgctg ggcccggcag gccctggggc tcaagggcct
    10081 gctgctgggc tgggcccctc cggtgcaggg cgccatccgg agccaggccc gccgcgccct
    10141 cacccgattt ctctcgccat gacattcgaa accggtgagc cccagaccct tccggaactg
    10201 gggcaggcac tgaaccgcgt ggtggccgaa ggggtgagct ttctcgctcc gatgagcgac
    10261 acggtcttct tcgcgcctca gggccctgcc tggagccccg cggagcatgt gcggcatctc
    10321 cggaagtcga gcgcgccgct ggtcaccgcg ctcaagctcc cccagctggt ggtgcggctc
    10381 cgcttcggcg gacggtccgg cccgtcacgc accttcgccc agctccgcga gctctacctc
    10441 ggcaagctgg ccgcgggtgg cggggcgggc cgctttgcgc cgagccagga gcccttcccg
    10501 gccaacccgg tggaccggcg caatgagatc atcaacggct ggaccgcggt cacggtcgag
    10561 ctcgtcaacg cgatgaaccg ctggtccgag acggccctcg accggcatca gcttcctcac
    10621 ccgctgctcg ggccgttgtc ggtgcgggag atgctcgcat tcaccgtgta ccacagcgcc
    10681 catcacttcc ggcggatcga cgaacggagc cgggccggag tatgagcacc atccgccccg
    10741 ggcgggcggc ggatgccccc gcgttgctcg cgctcctacc cgagctggcc gacttccccc
    10801 tcccggcgtg gcgcaccgcg tcccaggtgg cgaacgccga tgccggcatt ctcctcgcgg
    10861 cgatcacgcg cgacgaccag accagctgtg tcctggtggc ggaagatccc gatgggtcgg
    10921 tggccgggtt catcttctcc accacccggc aggactattt cacgggcaag cctcacaccc
    10981 acatcgaagt catcgtggtg cgacaggacg cccgcggccg gggactctcg cgccggctga
    11041 tcgacgcgac cgaggcctgg gcccgcgcgc gaggacattc caacgtcacc ctcaacgtct
    11101 ttgccaccaa tcagcgggcc ggcgcagtgt accagcggct gggctatgag ccggagacgg
    11161 tgcattacat caagccgctc aacctcgcgg cgacccgggg agaactcgac ccatgaaatg
    11221 gctgatctcg ctcgtggcag gcagcctggg gggcgccctc ggctggtggc tcggcaacct
    11281 ggaaggggtg atgaccggct tcttcctgag cgtgatcggc accgccgtcg cgacctacta
    11341 tgccaagcgc atgattgacg agtacctccc ctgagcccgc tcccgctgct cgccctggtc
    11401 cgcgaagtca cccccgccat cacccgctgt gagctcactc atctggcgcg ggagccgatc
    11461 gaccatgccc gtgccgtcag gcagcacgat gcctatgccc ggctcctccg cgagctgggc
    11521 gccgaggtcg aacgggttcc ggccgatccg gagcagcccg atgccgtctt catcgaggat
    11581 acggccgtgg tgctcgacga actggcggtg gtgacccggc ccggagcagc gtcgcgtcgg
    11641 ggcgagaccg cgccggtggc ggcgcggctg gaacgcgaac gccggctggt gcgtctcgag
    11701 gcccccgcca cgctcgacgg cggcgatgtc atcgtagcgg gccggaaggt gttcgtggga
    11761 cagacaaccc gcaccaatgc ggccgggctc gctgccctca acgcggccct ggctccggcc
    11821 ggctacgacg tgatcggtgt gccggtgacc gggtgtctcc acctcaagag cgccgcgacg
    11881 gctgcggcgc ccggggtcat cctcttcaat ccgcactggg tggacgccgg atcgttccag
    11941 ggctacgaca cagtcgcagt ccatcccgag gaacccagcg ccgccaatgt gctccgggtc
    12001 ggcgaggtgc tggttcagga tgcagcctac ccccgcaccc ggaaacggct gctcgagcgg
    12061 ggccttaccg tgcggatggt cgacctgtcc gagctcgcca aggccgaagg agccgttacc
    12121 tgctgcagcc tgattgtcag cagaggctcc cgttatgttt agggctctgc cacccgatac
    12181 ggtcatgcgc cgagcgatgc tgctcctcat cctgctggcg ggctgcgagc gcaggcagga
    12241 aaaatcccat ggcgaccgag cccttgattc ggccgcgacg gtgcccacgc cggctaccag
    12301 ctcgccactc ccgatcccga tcgacagcac catttcctgg gaccggatgg agcgcctgat
    12361 ccgttccgcc cccgattccc tccgcgcggt ccagcagctc cacacccggg cggtgacggc
    12421 gctcttcaag gacggccgtc gctaccacgc caccgagccg cggatcgacg ccgtgatcca
    12481 cctgctcaag gaagtggatc cggccggccg ggtcctgatc gccaccgagt aatgcgcgtt
    12541 ctcctggtgc acggcctcgg ccgcactcca ttgagccttc aggggctggc gcgcacgctc
    12601 aggcgctccg ggcatgtcac ccgctccttc gggtactacg ccttcgccga gcactatgac
    12661 cagatccggc agcggcttgc gagcgagctc cgggccatgg cccgggagca ggatcccgtt
    12721 gcgctggtcg ggcactcgct gggcgggctc ctgctgcgcc acgcgctgag tgacgccccg
    12781 ggcctcaacg tgcaccgtct gatcatgctc ggcaccccga accagccgcc ccggctcgca
    12841 gtccgcgcca agcgctggct cccatttcgg gtctttgccc ggagctgcgg ccacctgctc
    12901 gcgaccccat cggcgttcgc ccggattccg ccgccggcgg taccctacac cctgattgcg
    12961 ggcaccatgg gttggcgccg gattccgggg ccgttcgggg gcgagccgaa cgacggcctg
    13021 gtggcggtct ccgagacgat ggtccgggac ggcgacgaac cccatctact gccgatcagt
    13081 catacgttca tgatgaacga ccgccggctc aggcaactgg tcctggagct gctgactacc
    13141 ggtgatgacc cctcccactc cgaggacgac cgggatgcct gagccgctgt ccccacttcc
    13201 agccgtggtc acgctgcgat cgtcgctccg gaccatcgac gagcagctgg gcaccgggtc
    13261 cctcacgccc gaccgggtcg aggatatcaa gagcgcggtg gatgacatcc gcttccgtct
    13321 ctggggagtg atgaccgcca gtaccccggc cgagtaccag gccttccggg aacgcttccg
    13381 gctccggcgg gccaccgaga tctgccacgg gctggcgctc gatatcgccg agcagcggct
    13441 caccccgacg caccgtgagg cggccgagct ccgggcggcg ctccaggggc tgctggcgcg
    13501 gctcccggcg gactgaagcg gaggggctct gagcaccccc gccggcgctc cccgtttggc
    13561 catcggctgg cgtaccctcg cgcttgcggg cgtcgtcctg atcgcggcga tctacggcgt
    13621 gcgtaccgcc accggtggct ggcaaagcct gttcggccgg cggaccacgg tcactcacga
    13681 agtggcgctg ggacggctcg agtcggtggg caagctggtg accaccgaag ccgggctccg
    13741 tgacatcgtg gtctaccagg acacccggct cggcagcacc aagaagtccc tggtggtcgt
    13801 caccggtaag gcgctggtag ggatcgatct caagcatggc gccagcatcg atatcgacga
    13861 gactgcgcgg aggatacgga tcacggtccc ccatgcccgg ctcatcgggg tcgacatcgc
    13921 cagcctcaag acctacgatg agagccgcgg actgtggaac tggttcaagc ccgaggatcg
    13981 cgacgagatc ttcgggctgg cgcacgacca gttgcgggcg gcggcaagag acatggcagt
    14041 ggtggaacac gccgaacagg gcgcccgggc actgctcggc gcgctgttcg cgggcgacgg
    14101 gtacacggtg gacgtggtat tcacgccggc cgtcaccccg ccggcagatt gaaggcgcat
    14161 ggtcgtcggc tgatgcggaa acccgtcctc cttctactcg gcgctctcgc cgcggtcggc
    14221 ctggtgtcct ggagcctgtt caccccttcc cacgatcggc actggagcac cgaccagtcg
    14281 gtactcccca ccgtcgagtt ccatggcgac agcgcgctga ttcacggggt ccgcaacttc
    14341 cgctggacca gtgcgaccgc gttcgagccg gcgtgggaag accggagcta tcgcctcgac
    14401 caggtggcca ccgcctggta tgtgctggtg ccgttctcca aggcctggcg cggaccggcc
    14461 catgccttcg tcagcttcgg attcgacgac gggcgatatc tcgcggtctc ggtcgaggcc
    14521 cgccgggaag tgggcgagac ctacggtgcg ctcaagggcc tcttccgccg tttcgagctg
    14581 atctacgtgg tgggtgacga acgcgacctg atcgggcgcc gttcggtgta cgacggcacc
    14641 gatgtctacc tctaccccgt gaaggccgac cgggccggcg cccgcgcgat gctcaccggc
    14701 atgctcgagc gggtgaacca gctccacgac cggcccgagt tctacaacac catcaccaac
    14761 aactgcacgc tcaacctggt ccaccacgtc aaccagatcg tcccgggtcg aatcccgtcg
    14821 agctggcgga tcattctccc gggctacagt gacgcggtgg cccaggcgct cgggctgatc
    14881 gactccgccg gcaccctggc cgagatacgg cagcggttcc ggatcaacga ccgggcccgg
    14941 accgcgctcg attcggccga cttctcccgt ctcatccgcc agtgacgccc ggctgacatg
    15001 gcgtcgatct acgatctcaa gccgaaattc caggcgctgc tccgtccggt ggtgggatcg
    15061 ctggcgggcg ccggggtgac ggcgaaccag gtgacggtag cggcggcgct gctctccctc
    15121 gccaccgggg gcgcgatcgc gcggtggccc ggctcgcccc gggtgctcct gctggtgccg
    15181 ctggtgctct tcgtccgcat ggcgctcaat gccatcgacg gcatgctcgc ccgggaacac
    15241 aaccagaaga gtcgcctggg cgcggttctc aacgagctgg gcgatgtcgt tgccgactca
    15301 gcgctgtatc tcccgctggc cctggtcgcg ggcatcgacg cgcggctcgt cgtggccgcg
    15361 gtggtgatcg cggtgatcgc cgagatgacc ggggtggtcg cgatccagat cggcgccgcg
    15421 cggcgttatg acggcccgat gggaaagagc gaccgggcgt tctggttcgg gctgctcaca
    15481 ctgctactcg gcctgggggt cgcgccggga tggtggtcgc tggcgctggt gagcctgatc
    15541 gcgttactgg gcctggtcac catcttcaac cgcgcccggc gggcgctcga gacggagtca
    15601 tgagcggacc cgggctctca cggcaggtct ggatggtgct gggcgggatc ctggcgctgc
    15661 tggtgatcgc gagcctggtt tcgtggtacc tggcccgcac cgggccggag gggaagtacc
    15721 gcgagctccg ccagcgggtg cagtcgtggt ggatcatggt cggcgtgttc ggcgtcgcga
    15781 tcgcgatcga ccgctcgctc tcgatcatct tcttcggact ggtctccttc ctcgcgctca
    15841 aggagtacct ctcgctcatt cccacccggc gcgccgaccg gcgggtgctg ttctgggcct
    15901 atctcagcat tccggtccag tactactgga tctaccgcgg ctggtacggg atgttcatcg
    15961 tgttcatccc ggtctgggtg atgctcctga tctcggcccg catggtcctc atcggcgaga
    16021 cgaaggattt cctgcgggcg gtgggaacga tccagtgggg actgatgctg atggtgttcg
    16081 ccatcagtca tcaggcctac ctgctggtgc tgggcggggc gggcctggtg ctctacctgg
    16141 tggtgctgac ccagctcaac gacgtggccc agtacgtgtg gggcaagacc ttcgggcggc
    16201 acaaggccac gccgacggta agcccgggca agacgctcga ggggttgatc ggcgggatcg
    16261 tgaccacgac cgcgctctcg tacttcctgg ccccgcttct cactccgctc gaccggtggg
    16321 acagtctcgc cgccggtttc ctgatcagca ccggcggttt cctgggtgac atcaccatct
    16381 cggccctcaa gcgcgatctc ggcgtcaagg acagcggcca gctgatcccg gggcacggcg
    16441 gcatcctcga ccggatcgac agcctgacgt acacggcgcc gttgttcttt cattttctga
    16501 ggttttacta ctactaggcc gttggccttt ggcctttggc ctttggccgt tagccgttag
    16561 gtagtacgcc ctgtgtgaat cctcctttct gcgatccctg cccaatggcc atcggctaat
    16621 ggccaatggc taatggctaa tggccacacg ctgatgatcc ggattctcag ggtctgcttc
    16681 ttcgccctta tcgtccgcgc cgtcacgctc atcgtgctcg ggctcaacgt ccggcaccgg
    16741 gagcggctgc cgcgccgggg gccggcggtg ctcgcggcca accacaacag ccacctcgat
    16801 accgtggtgc tgatgtcgct cctgccgctc gccctcctcc cccgggtgcg tccggtcgcg
    16861 gcggcggact acttcctccg gaaccggctg ctcgcctggt tcgcgctcaa catcatcggc
    16921 atcctcccga tcgcccggca ccgcagtgac ccctcggtcg atccgcttct gccaatcgtg
    16981 gaagcgctcg accggggaga gatcctgatc ttcttcccgg aagggtcccg gggcgagccg
    17041 gagcagctgg ccgagttcaa gagcggcatc gcccggctgc aggagcgccg ccccgaggtc
    17101 ccggtcatcc ccgtgttcat gcacggactc ggcaaggtgc tgccccgggg cgagacgctg
    17161 ctggtaccgt tcttcgtgga tgtgttcgtg ggtaatccgg tcgcctggac cggtgaccgc
    17221 cacgctttca tggaaagtct tcgcggcgcg atctcggcac tggccgctga gggccacttc
    17281 acgccctggg agtagtcgcc atgtccgagc tcgtcatccg ccccgccacc gccgccgacc
    17341 tcgatgcgct ggccccgctc ttcgatggct atcgtcgctt ctacgaacag ccgggcgacc
    17401 tcgcgctggc ccggaagttc ctgggcgagc ggctggcgcg gatggacacg gtgatcttcc
    17461 tggccgagct ggcaggggtc gcagccggat tcacccacct ctttccgatc ttctcctcca
    17521 ctcgctgcca gcgtctctgg ctcctcaacg atctcttcgt cgatgcgaac gcccgcggcc
    17581 atggcgttgc gcgggccttg ctccgcgccg ccgagcatca tgcccgtgcc accggggcct
    17641 gcgggctcga gctcgcgacc gcccatacca acacgccagc ccagcgactg tatgagtcac
    17701 tgggctggca gctggatacg actttccgtc actacgaact gccgacgaac tgacatcagt
    17761 gcatcggccc ggtcttccgc tcccacagga cgttcacgat cacccaccgg ccgtcgaccc
    17821 gggccagctg gaggtagtcg atccagtcgg tcatggtcac cttcgcaatg gcggcgcccc
    17881 ggaagatgtc gtagatcctg acgtccttct cctgtttgtc cgccggggtg gacttgccga
    17941 agccccggcg cgtgctgttc accagcaccg tgctccccat cccctggatc atgtccttcc
    18001 cggacgccgt gtctctcacc acaatgcgct tgaccagctc gggactcacc gcgcgcgcca
    18061 tccggtcggc gtttccctcg aaccaccctt cggcgtagtc gagtgccgcg gcccggatgc
    18121 cggccgagtc ggccgcggtc tgggcatgga gtgaggcagt acttaccagg gcgagcgtga
    18181 gggcgaggga aagggggcgc atgaggacct cgagcagaag gacgcaccag gacgacggac
    18241 gcatgacggc acacgttgcg ccctggccgt gccggctcca accgcgaagg gatgagttgg
    18301 ccgggctgag gtgtgagttg gcgccaggct accggagcag gctcctgagc cgggcgctgt
    18361 gggtgcggct cgaggtcagc cgggtgccgt ccttgagcgt cagggtgtac tcaccgtgaa
    18421 aatacggctc gaccgaggtg atccgctcca gattcacgat ggccgagcgg tgcaccctga
    18481 ggaaccgctc cggatcgagc cgggtcgcca gcactttgag tggctcgcgg agaagatgca
    18541 ccgcccggcc gacatgcagc cgggcgtaat tgcccgcagc atcgatccag tcgatttcct
    18601 cggtccggac gaatgtcacc cggcttccgt cccggacgac cagacggctg gcgtggcccc
    18661 tcgcccgccg cagctcggcc agcaccgctt cgagcgctgc ctgggacgcg gccggcggct
    18721 gaccgcggcg ctcccgcacc ttggcgagcg ccgcttcgaa gcgccgcacc tccaccggct
    18781 tgaggagata gtcgaccgcg ttcacatcga acgcccgcac cgcgtgctcg tcgtacgcgg
    18841 tgatgaaaat gaccgacggc ctgagctcgg ccggcagcgc ctccagcact tcgaagccat
    18901 tgagctccgg catctgcaca tccaggaaca ccacatcggg ccgctcggcc aggagcactc
    18961 ggagcgtctc ttcgccgtca ccgcactccg ccaccaggct caggtcgccg tgcgccgcca
    19021 ccagggtgcg gatccgctcc cgggcgagcg gctcgtcatc cgcgatcacg acccggatca
    19081 tgcaaccggt tccgctgcga gcagcaccgg ctgctcgtgg tagggtacca cgaccgtcac
    19141 cgtgaagccg gccccggatt cgagggtcag ccggccgtcg ctgccgtaga gttcctcgag
    19201 cctcagacga gtgctgccga gccccacgcc ttcggggcgg ggctcgacca ggccggggcc
    19261 gtcgtccgat accgcgatcg tgagtgccgt tccttcgcgc ctggcggcga tggtgatggc
    19321 gccggcgcca gcccggcggg cgataccatg ctcgatcgcg ttctcgacca gtggctgcag
    19381 cagaagctgg ggcaccagtc ccgggagcgc cgctggatcg atgttgcggg tgattcggac
    19441 ccggtctcca aatcgcagct ggacgatggc cagatactcg tccagcagag tcagctcctc
    19501 cgacaacggc acctcatgtc cctggccccg ccccagtgcc cggcggagca gggtgctcaa
    19561 atgacccagc atcgcgtcag ccgcggcggg atcgcggtag acgagggtgg agatcccctg
    19621 cagcgtgttg aagagaaagt ggggatgcag gcgggcgctg agcgcgtcga gctgggcctc
    19681 ggagagccgc acccggagcc gggccgtcag ggcctcgcgc tcgcggaccc gctgctggaa
    19741 taccagcgcg tgcaccgccg cgatgacaca ccagaacgcg atggtctcgc tgatgaaggc
    19801 gtgggtcagc atctgggtga gcggcgggaa gttctggcgc aggaggtcgg ccatgaccca
    19861 gtgctggatc gcgaacttga gcggagtgag taccagggcc gagccgaagt tcagcgcgac
    19921 atgcgggagc cagcgctggc gctcgatggg aaaacgccgg gccagccaga agaacagcgg
    19981 ggtgaagatg gcgcagctgt accagtcggc cagccgattg atgaggaggg gaccccagaa
    20041 gatgggcttg ccgtcggcgg ccagagacac cgcccactgg cttgcggaga gcagagccag
    20101 caccgtccag gcgatagcgc cgaacaccca ccaacgggcc gttgaccgca tgccccaatg
    20161 tcggcgctgc tggggcgagg aggaagaggc cggggacaga ctggccctgc ggcggggccg
    20221 gctggcctca gctgccgacc cggaacaggt agctggcctt gaggaagaac ccgtcgctct
    20281 cccgcctgaa gtcgcggaac ttgaacgatt cgggctcgaa gagtgaactg ccgtacccgg
    20341 cgaagaagac cgtccccggc accggagtga aagagaccag gacgtcgccc cggaaacggt
    20401 tgtcgctgaa ggccgtggtc ttcacgtagt cgcccagcgc gggactgaag cggagaatcg
    20461 gcgcgaaggt ccgctgctcg tcgcgcaggg catcctgctc gaaggtgttg tattccccca
    20521 ccagccggat gaagagcggc ctcgcaatct ggtattcgag cttgagccgt ggcacccgct
    20581 ggcgcgccac cagggtccgg tcgctccgcc gcttgtactg attctggcgg tagcgggcct
    20641 cgatccggag ctggctggtg ggccggaagg tcagcccgaa atcggcgaag atgatctccg
    20701 cgctggccca ctcctggaag ttctcgtcct gtcccatcag gaagaacccg ttggccgaga
    20761 accgctgcca ctcgggcgtt gccagggaaa cgacgtagtc gcggttgggg atcttctgat
    20821 tgccgccggt gaaggccacc gtgtcgaggc cgccggtgcc gtcggagacc tcgagcgcgt
    20881 agccgcgata gatccggggg tcg
//
LOCUS       DATIFF010000350         5712 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1124897, whole genome shotgun sequence.
ACCESSION   DATIFF010000350 DATIFF010000000
VERSION     DATIFF010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5712
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1124897"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..505
                     /locus_tag="VLD58_05200"
     CDS             <1..505
                     /locus_tag="VLD58_05200"
                     /inference="COORDINATES: protein motif:HMM:NF012407.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HSB53727.1"
                     /translation="VDKANVLETSQLWRQVVTAVAAEFPDVQLEHIYVDYAAMRLVSD
                     PASIDVLLTENMFGDILSDEAAVLAGSLGLLPSASLGDGPGLFEPIHGSAPPLAGKDV
                     ANPIGTIASVAMLLRHGLKQPEPARAIEQAIHQVLNDGARTRDIARPGEPTLGTRAMA
                     ARVIAAL"
     gene            complement(590..844)
                     /locus_tag="VLD58_05205"
     CDS             complement(590..844)
                     /locus_tag="VLD58_05205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53728.1"
                     /translation="MLCERCGTREALSRDGEPVPCHLFGEIRGYFCPECVVELQRPYE
                     RELRESIAQRAPDLTDADLAAVPDQMLKFTLCLPIPGKQV"
     gene            complement(926..1888)
                     /locus_tag="VLD58_05210"
     CDS             complement(926..1888)
                     /locus_tag="VLD58_05210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53729.1"
                     /translation="MILNGVVIFLGLIVAAGAGFLVAWLIRRESMERSVTYASSLEQV
                     LAGMMRERDGLFERERLRNLEAGKTDEALRARVLELEKELEHRETQVIAFRDEAIQLA
                     RAREEVAQRLTRQERQSQETEASLRARIEELQENGTARGPGNRPTGGERELAALVAAH
                     ENDLAELESRYLMLIQSKDAEIDRLRAARASQAVSIPVAAPADAEPEPAAPDAEPEAD
                     EPEAPVAGDGPPPAPARPSAPRSRRSRRRSRDDLKQIPGIDESLEQALHLVGITSFKQ
                     VARWKEKDIERMAKRLYQPVERIREEQWVEKAQEAYSRKYGGSA"
     gene            complement(1895..3574)
                     /gene="ilvD"
                     /locus_tag="VLD58_05215"
     CDS             complement(1895..3574)
                     /gene="ilvD"
                     /locus_tag="VLD58_05215"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HSB53730.1"
                     /translation="MPHNLRSRTVTQGVQRSPNRAMLRAVGFGEADFEKPILGVANGF
                     STITPCNAGLDLLARQAEAAIRAAGGMPQLFGTITVSDGISMGTEGMKYSLVSREVIA
                     DSIETACSAESMDGVVAIGGCDKNMPGAMIAIARMNIPAIFVYGGTIKPGHLDGEDLT
                     IVSAFEAVGQFSAGRIDAERLHAVECHACPGAGSCGGMYTANTMSSAIEAMGMSLMGS
                     SSMAAEDPEKAESAAKSGAVLVDAVKAQRLPRQILTRKAFENAIAVVMATGGSTNAVL
                     HLLAIAHAAGVPLVLDDFESIRARVPVLCDLKPSGRYVITDLHKVGGIPQVMKMLLDH
                     GLIHGDCLTITGQTIAELLRGVPREPPAGQDVIHPWSRPIYPQGHLAILRGNLATEGG
                     VAKITGVKTPRMQGPARVFESEEACLAAILDHRIRPGDIIVIRYEGPRGGPGMREMLS
                     PTAAIIGAGLGDSVGLITDGRFSGGTYGMVVGHVAPEAQVGGTIALVEEGDTITIDAP
                     RRLLQLEIPDEELSRRRAAWRPRATGYTRGVLAKYARLVSSASLGAVTDLA"
     gene            complement(3715..4116)
                     /locus_tag="VLD58_05220"
     CDS             complement(3715..4116)
                     /locus_tag="VLD58_05220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HSB53731.1"
                     /translation="MKLISTVIRPEKLPEVKAALFRAGVTGITISRVSGHGGEKELVE
                     MYRAASVVLEFREKVKIEMAVSEPFVEPTIKAILASARTGEVGDGKIFVQPLERVIRI
                     RTGEADNAALTPVTADAVQKQAIQETMAGVK"
     gene            complement(4315..>5712)
                     /locus_tag="VLD58_05225"
     CDS             complement(4315..>5712)
                     /locus_tag="VLD58_05225"
                     /inference="COORDINATES: protein motif:HMM:NF013104.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HSB53732.1"
                     /translation="WTLVAGFLVMLMQFGFAMVETGFTRAKNAAHTATMNFMVYGIAM
                     AAYWICGFAIQAGGLGPILTLGQTADTATLTKALSVSLGGHTWNLMGLSGFFLAGVNY
                     TTPVFAYFLFQMVFMDTTATIPTGALAERWKWWSFVGLSLCIGGLIYPLYANWVWGGG
                     WLSQLGSNLGLGHGHVDFAGSSVVHMTGGVIALVTAKLLGPRRGKYGPDGRVNAIPGH
                     NIPMAMFGTFILCFGWFGFNAGSTLAGTDLRIGVIATNTMLAGAFGSLTAMVYMVTRF
                     GKPDPSMLANGVLAGLVAITAPCAFVTAPVACLIGGIAGVLVCWSVYFVDRTLKIDDP
                     VGAISVHGVNGAWGVLALGLFADGTYGDGWNGVAGGVRGLFYGDAGQFGAQVIGTLTN
                     IVVVGLLALACWQVVGLIVGGHRVSAEAEELGLDLPEMGALAYPDTQDISSAVVLATA
                     SAHSDSTAKSKKAAA"
BASE COUNT          909 a         1973 c         1896 g          934 t
ORIGIN      
        1 ggtcgacaag gccaacgtgc tggagacctc ccagctctgg cgccaggtgg tcaccgcggt
       61 ggcagccgag tttcccgacg tccagctgga gcacatctac gtcgactacg ccgcgatgcg
      121 gctggtgagc gatccggcct cgatcgacgt gctgctcacc gagaacatgt tcggcgacat
      181 cctcagcgac gaggccgccg tgctggcggg ctccctcggg ctcctgccct cggcgtcgct
      241 gggggatggt ccgggactct tcgagccgat tcatgggtcg gcgccgccgc tcgcggggaa
      301 ggacgtcgcc aatccgatcg gcaccattgc cagcgtggcg atgctgctgc gccacgggct
      361 caagcagccg gagccggccc gcgccatcga acaggcgatc caccaggtgc tcaatgacgg
      421 cgcccggacg cgcgatattg cgcgtccggg cgaaccgacc ctcggcacca gggcgatggc
      481 agcgagagtt attgcggcgt tgtagttagg gtctagaggt ctaggggtct gggagagctt
      541 tcctggacac tagacctcta gacctctaga cctctcgacc tcaagacccc taaacctgct
      601 tccccggaat cggcagacac agggtgaact tgagcatctg gtccggcacg gcggcgaggt
      661 ccgcgtccgt caggtccggc gcccgctggg cgatgctttc gcgcagctcc cgctcgtacg
      721 gccgctgcaa ctcgaccacg cattcaggac agaagtagcc gcgaatctct ccgaagaggt
      781 ggcaggggac cggctcacca tcccggctca gtgcctcgcg ggtgccgcag cgttcacaca
      841 gcatcgggcc tccgttggtc agggttccca aggtgcggga acatgacgtg gcggaggccc
      901 gattgtttcg ctctgcgccg tggtgtcagg cggagccgcc gtatttccgg ctgtaggctt
      961 cctgcgcctt ctccacccac tgctcctcgc gaatccgctc gaccggctgg tagagccgct
     1021 tcgccatccg ctcgatgtcc ttctccttcc agcgcgccac ctgcttgaag ctggtgatgc
     1081 ccaccaggtg cagggcctgc tccagcgatt cgtcgatgcc gggaatctgc ttgagatcgt
     1141 ccctgctccg ccggcgactg cggcgcgagc ggggcgccga ggggcgggcg ggagcagggg
     1201 ggggaccgtc gcctgccact ggcgcttcgg gctcgtctgc ctcaggctcg gcatcgggag
     1261 cggctggttc cggctcggcg tcggccggtg ctgccacggg aatgctcacc gcctggcttg
     1321 cccgtgccgc gcggagccga tcgatctcgg catccttcga ctggatcagc atcaggtagc
     1381 gggactcgag ctcggccagg tcgttctcat gggccgcgac cagcgcggcg agttcccgct
     1441 cgccgccggt ggggcggttt cccggaccgc gagcggtgcc gttctcctgc agttcctcga
     1501 tccgggccct gaggctcgcc tcggtctcct gcgactggcg ttcctgccgg gtgagccgct
     1561 gcgccacctc ctcgcgcgcg cgcgccagct gaatggcctc gtcgcggaag gcgatcacct
     1621 gggtctcgcg atgctccagt tccttctcga gctcgagaac ccgggctcgc agcgcttcgt
     1681 cggtcttgcc cgcttccagg ttccggagcc gctcccgttc gaacagacca tcccgttccc
     1741 gcatcatgcc cgccagcacc tgctccaggc tgctggcgta ggtcacgctc cgctccatcg
     1801 attcccggcg gatgagccac gccaccagga atccggcccc tgccgcgacg atcaatccca
     1861 ggaaaatcac cacgccattg aggatcatga tcgctcaggc gagatcggtg acggcgccga
     1921 gactggcgct ggagaccagc cgggcatact tggccagcac gccgcgggtg tagccggtgg
     1981 cgcgcggacg ccaggcggcc cggcggcggg acagttcttc gtcggggatt tcgagctgga
     2041 gcagccggcg cggggcgtcg atcgtgatgg tgtcaccctc ctcgaccagc gcgatggtgc
     2101 cgcccacctg cgcttccggc gcaacgtggc ctaccaccat gccgtaggtg ccgccggaga
     2161 agcgcccatc ggtgatgagc ccgaccgaat cgcccaggcc cgcgccgatg atcgccgcgg
     2221 tgggcgagag catttcccgc atgcctggcc cgccccgcgg tccttcgtag cggatcacga
     2281 tgatgtcgcc cgggcggatc cggtggtcga ggatcgcggc gaggcaggcc tcctcgctct
     2341 cgaacacccg ggcggggccc tgcatccgcg gggtcttcac accggtgatc ttcgcgacgc
     2401 cgccttcggt ggcgaggttg ccgcggagaa tcgccaggtg cccctgcggg tagatcggcc
     2461 tggaccaggg atgaatgaca tcctggcccg cgggcggctc gcggggaacg ccgcggagca
     2521 gctcggcgat cgtctggccg gtgatggtca ggcagtcgcc gtgaatcagc ccgtgatcga
     2581 gcagcatctt catcacctgc gggatcccgc cgaccttgtg gaggtcggtg atgacgtagc
     2641 gacccgaagg cttgaggtcg cagagcaccg ggaccctcgc ccggatggat tcgaagtcgt
     2701 ccagcaccag cggaacgccc gccgcatgtg cgatcgcgag gaggtgcagg accgcgttgg
     2761 tcgaaccgcc cgtcgccatg actaccgcga tggcattctc gaatgccttc cgggtcagaa
     2821 tctggcgggg caggcgctgg gccttcaccg catccaccag caccgctccc gacttcgccg
     2881 cgctctctgc cttctccggg tcctcggccg ccatgctgga cgagcccatg aggctcatgc
     2941 ccatcgcctc gatggccgag gacatcgtgt tggcggtgta catcccgccg caggaaccgg
     3001 cgccggggca ggcgtggcat tccaccgcat gcagccgctc ggcgtcgatg cggccggcgc
     3061 tgaattggcc caccgcctcg aaggcgctca cgatcgtcag gtcctcgcca tcgaggtgcc
     3121 ccggcttgat ggtgccgcca tagacgaaga tcgcggggat gttcatccgg gcgatcgcga
     3181 tcatcgctcc gggcatgttc ttgtcgcacc cgccgatggc gaccacccca tccatgctct
     3241 cggcgctgca ggcggtctcg atcgagtcgg cgatcacctc gcgggagacc agggagtact
     3301 tcatcccctc ggtccccatc gagatcccgt cgctcaccgt gatcgtgccg aacagctgcg
     3361 gcatcccccc ggccgcgcgg atggcagcct ccgcctggcg ggccagcagg tccagccccg
     3421 cgttgcaggg ggtgatggtg ctgaagccat tggcgacccc gagaatcggc ttctcgaagt
     3481 ccgcctctcc aaagccgacc gcccgcagca tcgcccggtt gggggaacgc tgcacgccct
     3541 gggtcacggt ccggctgcgg aggttgtggg gcatggaccc gtgaaagtgg tgggttccgg
     3601 agagctgacg gaggcaggaa tctactctcg gacggggacc cgcaacagaa cgagcgggac
     3661 ccctgagggc cccgctcggc gctgtccttc cctcgaaacg gcccacggcc ggggctactt
     3721 cactccagcc atcgtctcct ggatggcctg cttctgcacc gcgtcggcgg tgaccggggt
     3781 cagggccgca ttgtcggcct cgccggtccg gatccggatc acccgctcga gtggctgcac
     3841 gaagatcttg ccgtcgccca cctcgccggt ccgggccgag gcgaggatgg ccttgatggt
     3901 gggctcgacg aacggctcgg agacggccat ctcgatcttc accttctccc ggaattcgag
     3961 caccacgctg gctgcccggt acatctcgac cagttccttc tcgccgccat ggccgctcac
     4021 ccgcgagata gtgatgccgg tgaccccggc gcggaacaag gcggctttga cctccggcag
     4081 cttctccggc cggatgacgg tgctgatgag cttcatgaga gttctccagg gtagttggag
     4141 ccgggtcccc tgctgtcgga ggccgactgc cagccgccac ctgccggtgc acagtcgtcc
     4201 tggccagtcc gcaccccagg gaggaggcgg caggacttcc gattcccgat cgataccgac
     4261 tgacagccga caaccgacag cagcgacatg gcccggttcc tcaagcgttc gggatcaggc
     4321 cgcggccttc ttcgacttcg ccgtcgagtc ggaatgcgcc gaggcggtgg cgagcacgac
     4381 ggccgacgaa atgtcctgcg tatcggggta ggccagcgcg cccatttccg gcaggtcgag
     4441 gcccaactct tccgcctcgg ccgatacccg gtgaccgccc acgattagcc cgacgacctg
     4501 ccagcaggcg agggcgagca gcccgaccac cacgatgttg gtgagcgtcc cgatcacctg
     4561 cgcgccgaac tgtcccgcgt cgccgtagaa gagccctctc acgccgcccg ccaccccgtt
     4621 ccagccgtcg ccgtaggtgc cgtcggcgaa gaggccgagc gccagcacac cccaggcgcc
     4681 gttcacgccg tgcaccgaga tcgcgcccac cggatcgtcg atcttgagag tgcggtcgac
     4741 gaagtacacc gaccagcaaa ccagcacgcc ggcgatgcct ccgatgaggc aggcgaccgg
     4801 cgccgtgacg aaggcgcagg gcgcggtgat cgctaccagg ccggcgagga ccccattggc
     4861 gagcattgaa gggtcgggct tcccgaaccg ggtcaccata tagaccatcg ccgtcagact
     4921 gccgaacgcc ccagccagca tcgtgttggt tgcaatgacc ccgatgcgca ggtcggtgcc
     4981 ggcgagagtg ctgccggcat tgaagccaaa ccagccaaag cagaggatga acgtaccgaa
     5041 catcgccatc gggatgttgt ggcccggtat ggcattgacc cgcccgtcgg ggccgtactt
     5101 gccgcggcga gggccgagga gcttggccgt gaccagggcg atcacgccgc cggtcatatg
     5161 caccaccgag gagccggcga agtccacatg gccgtggccg agaccgaggt tgctgcccag
     5221 ctgcgagagc cagccgccgc cccacaccca gttggcatag aggggataaa tcagcccgcc
     5281 gatgcagaga ctcaggccca cgaagctcca ccacttccac cgctccgcca gcgcgcccgt
     5341 ggggatcgtg gcggtggtat ccatgaagac catctggaac aggaagtagg cgaacaccgg
     5401 cgtggtgtag ttcacgccgg ccagaaagaa gccggagagc cccatcaggt tccaggtgtg
     5461 tcccccgagg ctgacactaa gcgctttggt gagcgttgcg gtgtcggcgg tctggcccag
     5521 cgtcaggatc gggccgaggc cgccggcctg gatagcgaag ccgcagatcc aataggcggc
     5581 catggcgatg ccgtacacca tgaagttcat ggtagcggta tgggccgcgt tcttggcccg
     5641 ggtaaatccg gtctccacca tggcgaaacc aaactgcatc agcatgacga ggaaccccgc
     5701 caccagggtc ca
//
LOCUS       DATIFF010000351         1630 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_47614, whole genome shotgun sequence.
ACCESSION   DATIFF010000351 DATIFF010000000
VERSION     DATIFF010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1630
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47614"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..336)
                     /locus_tag="VLD58_05230"
     CDS             complement(<1..336)
                     /locus_tag="VLD58_05230"
                     /inference="COORDINATES: protein motif:HMM:NF014470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HSB53733.1"
                     /translation="MGNLGFTEIMLILLVVLLLFGAKRLPEVGSSIGKGIREFKRSLS
                     DTQEAIMGNDEPRNLQPRQPESPPQTTTPSSGEPKRLSQEPWGPSTRRARTGRCGLVV
                     CSAPRAPATA"
     gene            complement(346..618)
                     /locus_tag="VLD58_05235"
     CDS             complement(346..618)
                     /locus_tag="VLD58_05235"
                     /inference="COORDINATES: protein motif:HMM:NF025572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4321 domain-containing protein"
                     /protein_id="HSB53734.1"
                     /translation="MASGPHRPGYYLGVLIAGFIAGGAMTSLLRQTLPDSAARTFFTS
                     TWTASFGPVSADLLVISFTLGPIGLHVSLLSLIGVLVAYLIARSLF"
     gene            complement(618..>1630)
                     /locus_tag="VLD58_05240"
     CDS             complement(618..>1630)
                     /locus_tag="VLD58_05240"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HSB53735.1"
                     /translation="THGGTAGMSSQIAPVSLADIQRPLRARLERVQQELRRIVEADFG
                     LIAQVNAHLFQMQGKMFRPTLLLLADEAAGAHDPRATTLAAVIELIHLATLVHDDSVD
                     HSVLRRGMPTINALFSHQVSVIMGDYLYSRAVIELVRLDDLEPLRVMSRVTNEMTVGE
                     MRQLLAHDPLRFSEEEYDLLIQSKTASLVSGACEVGALRAGPSEREALRRYGMALGMA
                     FQIVDDLLDYVGDASVTGKPTGSDLREHKVTLPLISALQRFGDRDRAQVAELLRTPEP
                     TDGQIQEVVTAVADAGGLDYARGRALRLAEQADRELDRLAPSPARDALRASITYVVDR
                     RR"
BASE COUNT          245 a          571 c          582 g          232 t
ORIGIN      
        1 ggctgtcgca ggagccctgg gggccgagca cacgacgagc ccgcaccggc cggtgcgggc
       61 tcgtcgtgtg ctcggccccc agggctcctg cgacagccgc ttgggctcgc ccgaggaggg
      121 ggtggtggtc tgcggcggcg actccggctg ccgcggctgg agattgcgcg gctcgtcgtt
      181 gcccatgatc gcctcctgcg tgtcgctcag gctgcgcttg aattcccgga tgcccttgcc
      241 gatcgaggac cccacctccg gcagccgctt ggcgccgaac aggagcagca ccacgagcag
      301 gatcagcatg atttcggtga agccgaggtt gcccatgggg accccctaga agagcgagcg
      361 cgcgatcagg tacgccacca ggacgccgat caggctcagc agggacacgt gcagcccgat
      421 cggccccagg gtgaagctta tcaccagaag gtcggcggag acagggccga agctggccgt
      481 ccaggtactg gtgaagaagg tgcgggcggc gctgtcgggc agggtctgcc gcagcaggga
      541 cgtcatggcc ccgccggcga tgaacccggc gatgagcacg cccaggtagt acccgggccg
      601 gtgggggccg ctggccatca gcgcctgcgg tccacgacgt aggtgatgct ggcccggagc
      661 gcgtcccgcg cgggcgaggg ggccagccgg tcgagctccc ggtcggcctg ttccgccagc
      721 cgcagcgcgc ggccgcgggc gtagtcgagg cccccggcgt cggccacggc ggtcacgacc
      781 tcctggatct gcccgtcggt gggctccggg gtccggagca gctcggccac ctgggcccgg
      841 tcccggtcgc cgaaccgctg cagcgcggag atcagcggca gcgtcacctt gtgctcccgg
      901 aggtcggagc cggtcggctt gcccgtcacg ctggcgtcgc ccacgtagtc cagcagatcg
      961 tccacgatct ggaacgccat ccccagcgcc atgccgtagc ggcggagcgc ctcccgctcc
     1021 gagggcccgg cccgcagcgc gcccacctcg caggcgccgg agaccagcga cgcggtcttc
     1081 gactggatca gcagatcgta ttcctcctcg ctgaaccgga gcggatcgtg ggccagcagc
     1141 tggcgcatct cgcccaccgt catctcgttg gtcacccggc tcatcacccg gagcggctcc
     1201 aggtcgtcca gccggaccag ctcgatgacg gcccgggagt agaggtagtc gcccatgatc
     1261 accgacacct ggtgactgaa cagggcgttg atcgtgggca tgccccgccg cagcaccgag
     1321 tggtccaccg aatcgtcgtg gaccagcgtg gccagatgaa tcagctcgat caccgccgcc
     1381 agggtggtgg cccgggggtc atgggcgccg gcggcctcgt cagccaacag cagcagcgtc
     1441 gggcggaaca tcttgccctg catctggaac aagtgggcgt tgacctgggc gatcaagccg
     1501 aaatcggctt cgacgatccg gcgcagctcc tgttgcaccc gctccagccg ggcccgcaac
     1561 ggccgctgga tgtcggccag ggagaccggc gcgatctgag agctcattcc cgccgtcccg
     1621 ccgtgagtcg
//
LOCUS       DATIFF010000352         1125 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_201856, whole genome shotgun sequence.
ACCESSION   DATIFF010000352 DATIFF010000000
VERSION     DATIFF010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201856"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..365)
                     /locus_tag="VLD58_05245"
     CDS             complement(<1..365)
                     /locus_tag="VLD58_05245"
                     /inference="COORDINATES: protein motif:HMM:NF013161.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HSB53736.1"
                     /translation="MPATEAALRPPAGTGPRRLAWQSVEIVERVTETPRATTLVLHVP
                     RWPGHLAGQHVDVRLTAEDGYQAQRSYSIATPPEAPRLALTVERLEGGEVSPWLAGEA
                     GSGDRFELRGPIGGYFAWSV"
     gene            complement(352..960)
                     /locus_tag="VLD58_05250"
     CDS             complement(352..960)
                     /locus_tag="VLD58_05250"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase-like oxidoreductase"
                     /protein_id="HSB53737.1"
                     /translation="MTTTRGFSGRRRAHEGNRVPPGQFVTDDFPVLSAGPTPRTPLEK
                     WTLALQDGGSLAGRWTWGEFQSLPQTEIIVDIHCVTKWSKLGTKWKGVTIDHLIEAAG
                     LDEPPAPYLMAHCDGGYTTNLPVEDLIGGKGMVATHYDGEPLAPEHGGPARLLVPHLY
                     FWKSAKWVRRLRFMEHDEPGFWESLGYHIYGDPWREQRYAGD"
BASE COUNT          170 a          392 c          378 g          185 t
ORIGIN      
        1 acggaccagg cgaagtagcc gccgatcggc ccgcgcagct cgaaccggtc gcccgacccg
       61 gcctcaccgg cgagccaggg cgacacctcg ccgccctcga gccgctcgac cgtgagtgcc
      121 agccgcggcg cctcgggcgg ggtggcgatc gagtagctgc gctgggcttg gtagccgtcc
      181 tccgcggtga gccggacatc gacgtgctgg cccgcgagat ggccaggcca gcgcgggacg
      241 tggaggacga gcgtggtcgc ccggggggtc tcggtcaccc tctcgacgat ctccaccgac
      301 tgccaggcga ggcgccgcgg gccggtcccc gcgggcggcc gcagtgccgc ctcagtcgcc
      361 ggcataccgc tgctcgcgcc aggggtcgcc atagatgtgg tagccgagcg actcccagaa
      421 acccggctca tcatgctcca tgaaccgcag cctgcggacc catttggccg atttccagaa
      481 gtagaggtgc gggaccagca agcgcgccgg gccgccatgc tcgggcgcca gcggctcgcc
      541 gtcgtagtgg gtggccacca tgcccttgcc accgatcaga tcctcgaccg gcaggttggt
      601 ggtgtaaccg ccatcgcagt gggccatgag atagggcgcc ggcggctcgt cgagtcccgc
      661 cgcctcgatc aggtgatcga tcgtcacgcc cttccatttc gtcccaagct tgctccactt
      721 ggtgacgcaa tggatgtcga cgatgatctc ggtctgcggc agcgactgaa actcccccca
      781 ggtccaccgg ccagccagcg atcccccgtc ctgcagtgcc agggtccact tctcaagtgg
      841 agtgcgcggc gtcgggccgg cgctcaacac cggaaagtcg tcggtgacga actggccggg
      901 cggaacccga tttccttcgt gggcacggcg ccggcccgag aagcctctgg tcgtcgtcat
      961 gagcgctgtc tccgcgggct tcgcatcagg cggaccggaa cccgcgattg aatgcgggtg
     1021 gctccgtccg cctcaccttt acgctcagtg tgggtgtttt ggttgcttca aggcctacac
     1081 tctaacggaa ctactctcgt acgtgaagct ggcgcgcttg cacgg
//
LOCUS       DATIFF010000353         2358 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2048024, whole genome shotgun sequence.
ACCESSION   DATIFF010000353 DATIFF010000000
VERSION     DATIFF010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2358
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2048024"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..320
                     /locus_tag="VLD58_05255"
     CDS             <1..320
                     /locus_tag="VLD58_05255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HSB53738.1"
                     /translation="LSEEIQARLAKAGVRVLEARVSHLAYAPEIAGVMLRRQQASAVI
                     AARQKIVEGAVGMVELALQQLAGKGIVKLDEERKATMVSNLMVVLCSEQATQPVVNAG
                     TIY"
     gene            329..505
                     /locus_tag="VLD58_05260"
     CDS             329..505
                     /locus_tag="VLD58_05260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53739.1"
                     /translation="MAERKAFLLRIDPELYDALQRWASDELRSLNGQIEFVLRRALKE
                     AGRLPASGVEQEKP"
     gene            502..732
                     /locus_tag="VLD58_05265"
     CDS             502..732
                     /locus_tag="VLD58_05265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53740.1"
                     /translation="MSAPRCPHCSIGLTEGFLLEEEHHARTTTKWVEGVAERSFWGLR
                     LKGKLTLPVSALRCPRCGFLALYAAPVSPGAQ"
     gene            749..2332
                     /locus_tag="VLD58_05270"
     CDS             749..2332
                     /locus_tag="VLD58_05270"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSB53741.1"
                     /translation="MRITLALLLVPAALGAQIPATEGTFRIYQGKSEIGREWFRWSDT
                     LFRQSVVIPMINLNLESANARESSGRFAGFTLTLHNAAGDTLLGSYRATPAGDSVAIT
                     SDLPKAPPGRTRPGGFDMVMPPQSVASLALLVTRAQHRDTTWRLLMAGSDSILTVPVR
                     FTGDTARIRLGPIEIILHDSAGQVRSLEIPAQRARAVYARADENLPVLAGSPRPRPDY
                     TAPPGAPYTAEEVRVPVTPAVGDTFSLGCTLTLPKGGKRPLPAAITITGSGLQSRDEE
                     LWPTLAEYRPFRQIAERLATAGVATLRCDDRGKDASGGDPKVATTVDLANDTRAQLAW
                     LRGRAGINPAKIVLVGHSEGGIIAPMIAAEDRRIAGIILMAGPGKPGNAILRDQARWP
                     ILSKANLPPADRAAQLTAADSAVGADSSAAGAWFQWFYRYDPIPTAKKVTQPTLILHG
                     ALDRQVSAGQSDTLARAIRSGGNKQVTVRVFPGLNHLFLVSPTDGSPTEYGDLKDPRV
                     PVAVLDVLAEWLERVVSKK"
BASE COUNT          387 a          838 c          776 g          357 t
ORIGIN      
        1 agctttccga ggagatccag gcgcggcttg cgaaggcagg ggtgcgggtc ctcgaggcgc
       61 gggtaagcca cctcgcctac gcgcccgaga ttgccggcgt catgctccgc cgccagcagg
      121 ccagcgcggt gatcgcggcc cggcagaaga tcgtggaagg cgcagtcggc atggtggagc
      181 tggcgctcca gcagctcgcc ggcaagggaa tcgtgaagct ggacgaggag cgcaaggcga
      241 ccatggtcag caacctgatg gtggtgctct gctccgagca ggcgacccag cccgtcgtca
      301 acgccggcac catctactga gctgaatcgt ggccgaacgg aaggccttcc tgctcaggat
      361 cgacccggag ctctacgacg ccctgcagcg ctgggcgtcg gacgagctcc gctcgctcaa
      421 cgggcagatc gaattcgtcc tgcgccgggc tctcaaggag gcgggccggt tgcccgcatc
      481 cggcgtcgaa caggagaaac catgagtgct ccacgctgtc cccactgttc catcggcctg
      541 accgagggat tcctgctgga agaggagcac catgcccgaa ccaccaccaa gtgggtagag
      601 ggagtggcgg agcgttcctt ctgggggctc aggctgaaag gaaagctgac gctcccggtg
      661 agtgccctcc gctgtccccg ctgcggcttc ctcgcgctgt acgccgcccc cgtctccccc
      721 ggcgcccaat agcgcgctag agttcggcat gcgcatcaca ctcgccctcc tgctcgttcc
      781 cgccgccctc ggcgcccaga tcccggcgac cgagggcacc ttccgtatct accagggcaa
      841 atcggaaatc ggccgggagt ggttccgctg gagcgacacg ctcttccgcc agtcggtggt
      901 catcccgatg atcaacctga acctggaaag cgccaacgcc cgcgaatcgt cgggccgctt
      961 cgcggggttc accctcacgc tgcacaacgc cgcgggcgac acgctgctcg ggagctatcg
     1021 cgccactccc gccggcgact cggtggccat caccagtgat ctccccaagg cgccgcccgg
     1081 ccgcacccgc cctggcggat tcgacatggt gatgccgccg cagtcggtgg cgagcctcgc
     1141 gttgctggta acccgggccc agcaccggga cacgacctgg cgcctcctga tggcggggag
     1201 cgactcgatc ctgaccgtgc cggtgcgttt caccggggac accgcgcgga tcaggctcgg
     1261 ccccatcgag atcattctcc acgacagcgc cgggcaggtt cgctcgctcg agattcccgc
     1321 gcagcgggcc cgcgctgtct acgcccgcgc cgatgagaac ctccccgtcc ttgccggcag
     1381 tccccggccc cggcccgact acaccgcacc tcccggcgcg ccttacaccg ccgaagaggt
     1441 ccgggtacca gttacgccgg ccgtgggtga caccttctca ctcggctgta ctctgacgct
     1501 gccgaagggc ggcaagcgcc ctctccccgc ggccatcacc atcaccggct ccggactgca
     1561 gagccgcgac gaagagctct ggcccacgct cgccgagtac cgtcccttcc gtcagatcgc
     1621 cgagcgcctg gccacagcgg gtgtcgcgac cctccggtgc gacgaccggg gcaaagacgc
     1681 gagtggtggc gatcccaagg tggccaccac cgtcgacctc gcgaacgaca cgcgagccca
     1741 gctcgcctgg ctccggggcc gggctgggat caatccggcg aagatcgtgc tggtgggaca
     1801 cagcgagggc gggatcatcg ccccgatgat tgccgccgag gaccggcgca ttgcggggat
     1861 tatcctgatg gccggcccgg gcaagccagg gaacgcgatc ctgcgggatc aggcgcgctg
     1921 gccgatcctg tccaaggcca acctcccgcc ggccgaccgc gcggcacagc ttactgcggc
     1981 cgattccgcg gtcggggcgg attcgtcggc ggcgggcgcc tggttccagt ggttctaccg
     2041 ctacgacccg attcccaccg cgaagaaggt cacccagccg acactcattc tgcacggtgc
     2101 gctggaccgt caggtctccg ccggccagtc ggataccctg gcgcgagcca tccgctccgg
     2161 cggtaacaag caggtgaccg tccgggtgtt ccccggcctc aatcacctct tcctggtctc
     2221 gccgaccgac ggctctccca ccgagtacgg cgatctcaag gacccgaggg tgccggtggc
     2281 ggtgctggac gtcctcgcgg agtggctgga gagggtggtg agtaagaagt gagaagtgag
     2341 aagtaagaag tgagaagt
//
LOCUS       DATIFF010000354         5473 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2048118, whole genome shotgun sequence.
ACCESSION   DATIFF010000354 DATIFF010000000
VERSION     DATIFF010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5473)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5473)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5473
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2048118"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..375
                     /locus_tag="VLD58_05275"
     CDS             <1..375
                     /locus_tag="VLD58_05275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53742.1"
                     /translation="HQIFLRATSKGVTREVRVPETVGLGWNSMAPFRLAISSEWVVFN
                     PIWLAGLVVPLAYWFGRSAPGVGGLLTATALAAGLILIPLITHAAPTTRPEWAGALAG
                     ALGGCFFGIRSRRHVTSEPVPA"
     gene            372..1583
                     /locus_tag="VLD58_05280"
     CDS             372..1583
                     /locus_tag="VLD58_05280"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSB53743.1"
                     /translation="MSTHLPFRKRILLVLFLLGVLPTAVALVGLALAVRSPAVTTKAN
                     RAVMEDLARTGRTLVETLDTARLKPAERKALSAHSRALNDAISRGQRQDTYAAYYSYI
                     LPILVLVLGGLVLTAAMRLGGYLSGQLSRPIEELIGWTGNIRRAEPLPPDEREGGAPE
                     FASLRLALREMASSLAEARAREIEGERLRAFREVARRVAHEMRNPLTPIRFAVSQLTR
                     SAQADQKEALEVLQAESARLEQLAREFTEMGRLPEGPAAEVDLGELLSELARTALPAG
                     VSPTLALDPATPRINGHYEPLRRAFSNLLRNASEAMNSSGEVDLACRPLGENGAEVRV
                     TDHGPGVPAELRERLFDAYVTGKADGTGLGLALVKQTVEAHGGRIRHEPTAGGGATFI
                     ITLPRRRQPAK"
     gene            1602..3002
                     /locus_tag="VLD58_05285"
     CDS             1602..3002
                     /locus_tag="VLD58_05285"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSB53744.1"
                     /translation="MPHILIIDDEANIRRMLAALLRAEGFAVDEAPNGPAGLLALEQL
                     DPDAIFLDLFMPPGPDGLDTLGQVRAKGCEAPVIMMSGKAQLADAVRAAQLGAFQFLE
                     KPLSPEAVLVTLKAAVELGRTRSQNRALRQALESRDEMVGESAALKQVRQLIAQVAPT
                     DARVLITGESGTGKELVASAIHRASRRGKEPFVTVNCAAIPRELVESEMFGHERGAFT
                     GATERRLGRFELADKGTLFLDEIGDLNLEAQAKLLRTLETGVLQRLGAEQPTRVDVRV
                     VAATNRRLDQAVAQGGFREDLFFRLNIFPIHIPPLRERMEDLPQLIAHLAHRARPRYP
                     QRYSPEALATLRQYPWPGNIRELANLVERLAILGGETISPDDVLMVLPAAGGKGATAP
                     GRSEPTQPRPATADPSLSLTELLDRYERELISDALTRAEGNVAEAARVLQTDRANLYR
                     RMKRLGLATRGEAVGG"
     gene            2995..4743
                     /locus_tag="VLD58_05290"
     CDS             2995..4743
                     /locus_tag="VLD58_05290"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HSB53745.1"
                     /translation="MGELRRRALAALVLLVLGCVPALAAQDSVVVISPDEAPPDSASL
                     GLPPQVLAELLDTWNDSGTVRLPGGLTLPAGAALSGRVAALRGTMRIRGTFTGTLTVI
                     NGDLVVEPGGSVQGDVLVAGGRFTVEPGGIHEGEQRVYWDAAPVQRQSDGSLSIRERR
                     RPIGELATAQKSFQTGDIRTTLRLTTTQTYNRIEGLGIVFGPAFEWRASDALTASLDA
                     RGILRTAPDPSPFRRDLGWLVRTDWRFHGSRGFGFGARTYSVISGIEEHTLPRDEIGW
                     NAFLFQRDNRDYFSSEGVSGSAYNYFSRHFRMDVSARYEKQGSVRSNNPWSLFRNEDS
                     WRANPLIDDGHYTTFGLSAEYDTRNDRDNPSSGWWIRGSLEHSRSNDVAPIGLPTTIR
                     QPVPTTDYDFNRFTLDARRYYRLSPEAQLSLRIWSAGWLAGDPLPLQRRLSLGGLDLL
                     PGYGFRDLNCAPPGYDDPSRAALCDRALITQSEFRHRLRLRAGYMVRDPNHQEFNRFV
                     GIQDPDLVVFADAGSAWLSGKGPGRVPNNRIQSITQWKADAGVGIDAGGIAAYLVKAL
                     TDGEPVRFYLRLERRF"
     gene            4750..5412
                     /locus_tag="VLD58_05295"
     CDS             4750..5412
                     /locus_tag="VLD58_05295"
                     /inference="COORDINATES: protein motif:HMM:NF025692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HSB53746.1"
                     /translation="MGADRGRQRPLALVGMFFLLGLPSAALAQAPEKEPVRLEVTAEP
                     STHDPTVFTRNLLEDTPWLGTLRQGLPLRLLYRLEVWRSRDAWLDEQIRQVEWTVVVR
                     HEPLLDQFTVTRLGPFRGPPATRRLGTAGALAEFLGVGLRYPVLTPKEPGRYYYRATL
                     SVATLSDSDLDKFERALRGELDPRSDDGGGIAERARRLVLRLAGLPTANLADDSDQFE
                     VR"
BASE COUNT          849 a         1876 c         1914 g          834 t
ORIGIN      
        1 catcagatct tcctgcgggc gaccagcaag ggtgtcaccc gcgaggtgcg ggtgcccgag
       61 accgtcgggc tcggctggaa cagcatggcg ccgttccgac tcgccatctc gagcgagtgg
      121 gtcgtcttca acccgatctg gctcgccggg ctggtcgttc cgctcgccta ctggttcggc
      181 cggagcgcac ccggcgtggg tggtttgctc accgccactg ccctggcggc cggtctcatc
      241 ctgatcccgc tcatcaccca cgcggctccg accacgaggc ccgagtgggc cggtgcgctg
      301 gccggtgcgc tgggcggatg cttcttcgga atccggtcac gccgtcacgt cacctccgag
      361 ccggtgcccg cgtgagcaca cacctgccct tccgcaagcg catcctgctg gtgctcttcc
      421 tcctcggcgt gctgccgacg gcggtcgcgc tggtggggct cgcgctggcg gtccgctcgc
      481 ccgcggtgac caccaaggcc aaccgggctg tcatggaaga cctggcccgg accggccgga
      541 cgctggtcga gaccctcgat accgcgcggc tcaagccggc ggaacgcaag gcgctgagcg
      601 cccacagccg ggcgctcaac gatgcgattt cccgaggcca gcggcaggac acctacgccg
      661 cctactactc ctacatcctt ccgattctgg tgctggtgct gggcgggctg gtcctcaccg
      721 cggcgatgcg gctcggggga tacctctcgg gccagctgag ccgcccgatc gaagagctga
      781 tcggctggac cggcaacatc cggcgcgcgg aaccgttgcc acccgatgag cgtgaggggg
      841 gcgcaccgga gttcgcttcg ctgcgactgg cgctccgcga gatggcctcg agcctggccg
      901 aagcgcgggc gcgggaaatc gagggggagc ggctccgcgc gttccgggag gtggcgcgcc
      961 gggtcgccca tgaaatgcgg aacccgctca cgccgatccg tttcgccgtg agccagctga
     1021 cccgttcggc ccaggccgat cagaaggaag ccctcgaggt actccaggcc gagtcggccc
     1081 ggctggagca gctggcgcgg gaattcaccg agatggggcg gctccccgag gggccggccg
     1141 cagaagtgga cctgggcgaa ttgttgagcg agctggcccg gaccgcgctt ccggccggcg
     1201 tgtctccgac cctggcactc gaccccgcga caccgcgcat caacggccac tacgagccgc
     1261 tccgccgggc gttcagcaac ctgctgcgca atgcgagcga ggcgatgaac tccagtggcg
     1321 aggtggacct ggcctgccgc ccgttagggg agaatggcgc cgaggtgaga gtgacggacc
     1381 acggccccgg tgtgcctgcc gagctgcgtg agcgtctctt cgacgcatac gtcaccggga
     1441 aggcggacgg caccggcctg ggcctggcgc tggtgaagca gaccgtcgag gcgcatggcg
     1501 gacggatccg gcacgaaccg accgcgggtg ggggcgcgac cttcatcatc actctgcccc
     1561 gcaggagaca accggccaaa tgaagcgagt atcttagacc catgcctcac atcctcatca
     1621 tcgacgacga agccaacatc cggcgcatgc tggcggccct gctccgggcc gaaggcttcg
     1681 cggtcgatga ggcgcccaac gggcccgccg gcctgctggc gctggagcag ctcgaccccg
     1741 acgcgatctt cctggatctc ttcatgccgc cgggccccga cgggctcgac acgctgggcc
     1801 aggtccgggc gaagggctgc gaggcgccgg tcatcatgat gagcggcaag gcacagctcg
     1861 ccgatgcggt ccgcgcggcc cagctcggcg ccttccagtt tctcgagaag ccgctgagtc
     1921 ccgaagcggt gctggttacc ctcaaggccg cggtggagct ggggcggacc cggagccaga
     1981 accgggcgct ccgccaggcc ctcgagagcc gcgatgagat ggtgggagag agcgccgcgc
     2041 tcaagcaggt gcggcagctc atcgcccagg tggcgccgac agacgcgcgg gtgctgatca
     2101 ccggcgaatc cggcaccggc aaggaactgg tggcctcggc cattcaccgc gcctcccggc
     2161 ggggcaagga gccgttcgtc accgtgaact gcgccgcgat tccgcgggag ctggtcgagt
     2221 cggagatgtt cggccacgag cggggggcct tcaccggcgc caccgaacgg cggctggggc
     2281 gcttcgagct ggcggacaag ggcacgctct tcctcgacga gatcggcgac ctcaacctcg
     2341 aggcccaggc caagctgctc cgcaccctcg agaccggcgt gctccagcgg ctcggcgccg
     2401 aacagccgac ccgggtcgat gtgcgggtgg tggccgcgac caaccggcgg ctggaccagg
     2461 cggtggcgca gggcgggttc cgggaagatc tcttcttccg gctcaacatc ttcccgattc
     2521 acatcccgcc actccgtgag cggatggagg acctccccca gttgatcgca catctggcgc
     2581 accgcgcccg tccccgctac ccacagcgat actcgccgga ggccctcgcc acgctgcggc
     2641 agtatccctg gccgggaaac atccgcgagc tcgcgaacct ggtggagcgg ctggcgattc
     2701 tgggcggcga aaccatctcg ccggatgacg tactgatggt gcttcctgcc gcgggcggaa
     2761 agggcgcgac ggcgccaggg cgatccgaac cgacgcagcc ccgcccggcc acggccgacc
     2821 catccctctc cctcaccgag ttgctggacc gctacgagcg ggaactgatt tccgacgcgc
     2881 tgacccgggc cgaaggcaac gtggccgagg cagcgcgggt gctccagacc gatcgcgcca
     2941 acctctatcg ccggatgaag cggctggggc tggccacgcg aggcgaggcc gttggtgggt
     3001 gagctgcggc ggcgggcgct cgcggccctg gtgcttctcg tgctggggtg cgtccccgcg
     3061 ctggcggcac aggacagcgt cgtggtcatc agtcccgacg aggccccgcc cgactcggcc
     3121 tcgctcgggc tcccgccgca ggttcttgcc gaactgctcg atacctggaa cgactcgggg
     3181 acggtacgtc ttccgggcgg gctgacgctt ccggccggcg cagcgctctc gggccgagtg
     3241 gcggcgttgc gcggcacgat gcggatccgg ggaacgttca ccgggacgct caccgtcatc
     3301 aacggcgatc tcgtcgtcga gccgggtggc tcggtccagg gagacgtgct ggtggcggga
     3361 gggcgcttca ctgtcgagcc cggtgggatc cacgagggag agcagcgggt ctactgggat
     3421 gccgcgccgg tgcagcgcca gtcggacggt tcgctctcga tccgggagcg gcgccggccg
     3481 atcggcgagc tggcgacggc gcagaagagc ttccagaccg gcgacatccg caccacgctc
     3541 cggctgacca ccactcagac ctacaaccgg atcgagggtc tggggatcgt cttcggcccg
     3601 gcgttcgaat ggcgggccag cgacgcgctg acggcgagcc tcgatgcccg cgggattctc
     3661 cgcaccgcgc ccgatccctc cccgttccgg cgggacctgg gctggctggt gcgcaccgac
     3721 tggcggttcc acggctcgcg cggcttcggc ttcggggccc ggacctactc ggtcatctcg
     3781 gggatcgagg agcacaccct tccccgtgac gagatcgggt ggaatgcgtt cctcttccag
     3841 cgggacaacc gcgactactt cagcagcgaa ggggtgagcg ggagcgccta caactacttc
     3901 agccgccact tccggatgga tgtcagcgcc cgttacgaga aacagggctc ggtccggtcc
     3961 aacaacccct ggtcgctctt ccggaacgag gattcctggc gggccaatcc gctgatcgat
     4021 gacgggcact acaccacctt cggcctgagc gcggagtacg acacccgcaa cgaccgggac
     4081 aacccgtcgt caggctggtg gatccgcggc agcctggaac attcacgaag caacgacgtc
     4141 gcgccgatcg ggctcccgac cacgatccgc cagccggtgc cgaccaccga ctacgacttc
     4201 aaccgcttca ccctcgacgc gcggcgttac taccggctct cgcccgaggc gcagctgagt
     4261 ctccggatct ggtcggccgg atggctcgcg ggtgatccgc tgccgctcca gcggcggctg
     4321 tcactgggcg gtctcgacct gctgccgggc tacggtttcc gtgacctcaa ctgcgcccca
     4381 ccgggctacg acgatcccag ccgggccgcc ctctgcgacc gggcgctcat cacccagagc
     4441 gagttccgcc accggctccg gctccgcgcc gggtacatgg tgcgcgatcc caatcaccag
     4501 gagttcaacc ggtttgtcgg cattcaggat cccgacctcg tggtctttgc cgacgcgggc
     4561 tcggcctggc tctcgggcaa gggtccgggc cgggtgccga acaaccggat ccagtcgatc
     4621 acccagtgga aggccgatgc gggggtggga atcgatgcgg gcgggatcgc ggcctatctg
     4681 gtgaaggcac tcacggacgg ggagccggtc cggttctatc tccggctcga gcggcggttc
     4741 tgatttcaca tgggcgctga tcggggccgg cagcggccac tggcgctggt agggatgttc
     4801 ttcctgctgg gcttgccgtc ggcagcgctg gcccaggcgc ccgagaagga gccggtacgc
     4861 ctcgaagtca cggccgagcc cagtacccac gaccccaccg tcttcacccg gaatctcctc
     4921 gaggacacgc cctggctcgg aacgctcagg caggggctgc ccctcaggct cctgtaccgg
     4981 ctcgaggtct ggcgctcccg ggatgcctgg ctcgatgagc agatcagaca ggtcgaatgg
     5041 acggtagtgg tgcggcacga gccactgctc gaccagttca cggtcacccg actggggcca
     5101 ttccggggcc ctccggccac tcggcggctg ggcacggctg gcgcgctggc cgaatttctc
     5161 ggcgtcggtc tccgttaccc ggtgctcaca ccgaaggagc cgggacggta ctactatcga
     5221 gccacactct cggtggcgac gttgtccgat tccgatctcg acaagttcga gcgggcgctc
     5281 aggggcgaac tcgatccacg gagtgatgac ggagggggta tcgcggagcg ggcacggaga
     5341 ctggtgctcc ggctcgcggg tcttccgacg gccaacctgg cggacgattc ggatcagttc
     5401 gaggtgaggt gaggagtgag aagtgagaag tgagaagtaa gaagtaagaa gtgagaagtg
     5461 agaagtgaga agt
//
LOCUS       DATIFF010000355         4937 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1585540, whole genome shotgun sequence.
ACCESSION   DATIFF010000355 DATIFF010000000
VERSION     DATIFF010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4937
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1585540"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..851
                     /locus_tag="VLD58_05300"
     CDS             <1..851
                     /locus_tag="VLD58_05300"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HSB53747.1"
                     /translation="RQEIPSGFVAANYEVRRFFAPARDGERVPVSVLMKRGTRLDGQN
                     PALLYAYGSYGSTTEPTFNSNVLSLVDRGFVYAIAHIRGGQEMGRRWYDNGKMLHKLN
                     TFHDFIDVAEELVRRKYTSPRLLVANGGSAGGLLMGAVANMRPDLFRAIVADVPFVDV
                     INTMLDASLPLTAQEWEQWGNPRIREQYQYMMQYSPYDNVRPQDYPWMLVTTSLNDSQ
                     VMYWEPAKWVARLRATRTDQNPFYLKTNMAGGHGGSSGRYDRLHEAAFRYAFMLSAVG
                     SAEATP"
     gene            complement(861..1841)
                     /locus_tag="VLD58_05305"
     CDS             complement(861..1841)
                     /locus_tag="VLD58_05305"
                     /inference="COORDINATES: protein motif:HMM:NF024874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSB53748.1"
                     /translation="MNSLHRTPRGFRNPWPGAEPKGLANLLRWFAERHTTRPPAPDPD
                     PSVFPLQRPRLGRVPHEGELAATWLGHSAVLLEFPTCTVLTDPMLGEIAAPIPAARLK
                     RWVPAPIPAEQLPPVDLVLLSHNHYDHLDAPTVRILAERQPETVWCVPLGLGKLLRRL
                     GVERVEEFDWWEARRIGDALVTATPAQHFSARGVHDRNATLWCGFTVRIGQRAVYFAG
                     DTAHHPEFRAIGERLGPFDLLLLPVGAYEPRWFMQVMHMNPEEALRAFAEISGSTSPA
                     MLPIHWGTFKLTDEPMDEPPRVTRELWTGAGRPGELLWLLQHGETRLLPR"
     gene            2018..2461
                     /locus_tag="VLD58_05310"
     CDS             2018..2461
                     /locus_tag="VLD58_05310"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HSB53749.1"
                     /translation="MNRHGFTLIEAVLTVVIAGLLAMLGFPTFARTLSSRAAWNARAV
                     AIGMYAQARANATETGRATTLQWNGNTAVITATPRLNGASGSDTIGPPRNFDTMFGVS
                     VSGSPSAVLTIDPRGLGTSASTVIFFDRNGTRDSILVTGYGRVVK"
     gene            2458..2829
                     /locus_tag="VLD58_05315"
     CDS             2458..2829
                     /locus_tag="VLD58_05315"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HSB53750.1"
                     /translation="MKSRDGFTLVEVLVAIMVLTTGLLAVAAGSGSIYRMLGSGRRSS
                     AAAAVAQNRLEAIRRIANRTNPRCTDGSLVSGNATQAGGIAERWIVAGTGASRTITEI
                     VVAPTSRGTSTDTIFATLECL"
     gene            2826..3677
                     /locus_tag="VLD58_05320"
     CDS             2826..3677
                     /locus_tag="VLD58_05320"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HSB53751.1"
                     /translation="MSRARRWGFTLVEMLVAIVILGLVAASLNKIFNAQQRLAVAQVE
                     QASVQATVRNASTIASTELWELSTSPAGVSDIVNFDATGLSYRAMRTLGLACQVSANE
                     VRLRDSFLSQYRSIIPGQDALLIFVERNPQQSSDDSWLQLQITSVSNGSSCGGSGAVR
                     LGVSTIDSASLAGIITDAPIRTFEIMELRPVTVGTQTWLGARSVSGGEAALQPVAGPV
                     NANGIRFTYLDSLGTVTTQADRIRSIRISLLGESDRAARRLQSNAVELVQDSLSTTIT
                     LRNTPRP"
     gene            3698..4840
                     /locus_tag="VLD58_05325"
     CDS             3698..4840
                     /locus_tag="VLD58_05325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly PilX N-terminal domain-containing
                     protein"
                     /protein_id="HSB53752.1"
                     /translation="MSPSLRHDRRGIALALALFATVIATLIITAVFYIARLEQRMGNN
                     RIASMQAREAAETGLSAVLANWSTATYNTMANSATLSIPQTAVGGGASYTGILRRLTP
                     TTFLISVNGEYRVGGQVITRRQLARIVRLTQPSINMNAAVTTRVGITVSGSSQVSGVD
                     SVPSTWGGQCPPPGATQPGIRDSSGNVTTSGACSGASCIAGSPRILTDPAVNSGTFNQ
                     FGDVGFNELAALADKTISGTVTGIGPTINTGPPVACRIGDYTNWGDPLNPASVCGNYF
                     PIIYAPDDVRLSGGWGQGILLVAGDLEIAGGVEFYGPVIVQGRIRSTGTGGHIYGGLM
                     AANADFSVSLLSGNSVVNFSSCAINRALNGSARAKAIRERSWAQVY"
BASE COUNT          821 a         1758 c         1602 g          756 t
ORIGIN      
        1 agcgccagga gattcccagc gggttcgtag cggccaacta cgaagtgcgc cggttcttcg
       61 ctccggcccg tgacggcgag agggtgccgg tgtcggtgct gatgaagcgg ggcacccggc
      121 tcgacggcca gaacccggcc ctcctctacg cctacggctc ctacggatca accaccgagc
      181 ccaccttcaa cagcaacgtg ctgagcctgg tcgatcgggg cttcgtctac gccattgcgc
      241 acatccgggg cggccaggag atggggcgcc gctggtacga caacggcaag atgctccaca
      301 agctcaacac ctttcacgac ttcatcgacg tggccgagga gctggtgcgg cggaagtaca
      361 ccagcccgcg gctgctggtg gccaacggtg gcagcgccgg aggcctcctg atgggcgcgg
      421 tggccaacat gcgccccgac ctcttccgcg ccatcgtggc ggatgtgccg ttcgtcgacg
      481 tcatcaacac catgctcgac gcctccctgc cgctcaccgc ccaggagtgg gagcagtggg
      541 gcaatccccg catccgggag cagtaccagt acatgatgca gtactcgccg tacgacaacg
      601 tgcggccgca ggactacccc tggatgctgg tcaccacctc gctcaacgac tcccaggtga
      661 tgtactggga gccggccaag tgggtggccc ggctccgcgc cacccgcacc gatcagaacc
      721 ccttttacct caagaccaac atggccgggg gtcatggcgg ctcctcgggc cgctacgacc
      781 ggctgcatga ggccgccttc cgttacgcgt tcatgctgag cgcggtagga tcggccgaag
      841 ccacgccctg agtggcatag tcagcgtggg agaagccgcg tctctccgtg ctgcagcagc
      901 cagagcagct cgccggggcg cccggccccg gtccacagtt cccgggtcac gcggggcggc
      961 tcgtccatcg gctcgtcggt cagcttgaac gtgccccagt ggatcggcag catcgcgggt
     1021 gaggtgctgc cgctgatctc cgcaaaggcc cggagcgcct cctccgggtt catgtgcatc
     1081 acctgcatga accagcgcgg ctcgtaggct ccgaccggca gcagcagcag gtcgaagggg
     1141 ccgagccgct caccgatcgc cctgaactcg gggtggtggg cagtatcgcc ggcgaagtag
     1201 accgcccgct ggcctatccg caccgtgaat ccgcaccaga gcgtggcatt ccggtcatga
     1261 acgccccggg cgctgaagtg ctgggccggg gtggccgtaa ccagcgcgtc accgattctc
     1321 cgcgcctccc accagtcgaa ctcctccacc cgctcgaccc cgagccgccg gagcagcttg
     1381 ccaagcccga gcggcacgca ccacaccgtc tccggctgcc gttccgccag aatgcgcacc
     1441 gtcggcgcat cgagatggtc gtagtgattg tgcgagagca gcaccaggtc caccggcggg
     1501 agctgctccg ccggaatcgg cgccggcacc cagcgcttga gccgcgcggc gggaatcggc
     1561 gccgcgattt cacccagcat cggatcggtc agcacggtgc aggtcgggaa ctcgaggagc
     1621 accgccgagt gaccgagcca ggtcgcggcc agctcaccct cgtgcggcac ccgtccaagt
     1681 cggggccgtt gcaggggaaa gaccgagggg tcgggatcgg gcgcgggtgg gcgggtggtg
     1741 tgccgctcgg cgaaccagcg gaggaggttg gccaggccct tcggctcggc cccgggccag
     1801 gggttccgga agcctcgcgg ggtgcgatgg agggaattca tacccgaatc gtagccgggt
     1861 ggagcggtga cccaccagtt tctggggacc gaacggttct tatacagtta cagaaacggc
     1921 gcaagatgtt cttttacttg gaataggatc agctcccatt caacccagtg gtacaaaagc
     1981 cgacaatgag tagcacagtg ccggaaggag cctccctgtg aatcgtcatg ggttcaccct
     2041 gattgaagca gtactcaccg tcgtgatcgc cggtctcctc gccatgctcg gcttcccaac
     2101 gttcgctcgc acgctgagtt cacgcgccgc ctggaacgcc agggcggtcg cgatcggcat
     2161 gtatgcgcag gcccgcgcca acgccaccga aaccggccga gccacgacgc tccagtggaa
     2221 cgggaacacc gcggtgatca cggcgacccc ccgcctcaac ggcgcgtcgg gctcggatac
     2281 catcggccca ccccggaact tcgacacgat gttcggggtg agcgtttccg gcagccccag
     2341 cgcggtcctg accatcgacc ccagagggct ggggaccagc gcctccaccg tcatcttctt
     2401 cgaccggaac ggaacccgtg acagcatcct ggtgaccggc tacgggaggg tggtcaagtg
     2461 aaatcacgcg acggcttcac ccttgtcgaa gtgctcgtgg ccatcatggt cctgaccacc
     2521 gggctcctgg ccgtggccgc gggttccggc tcgatctacc gcatgctcgg cagcgggcgc
     2581 cgctcctcgg ccgcggccgc cgtggcgcag aaccgcctcg aggcgatccg ccgcatcgcc
     2641 aaccggacca acccgcgctg caccgacggc agcctggtct ccgggaacgc gacccaggcc
     2701 ggcggcatcg ccgagcgctg gatcgtggcg ggcaccggcg ccagccggac gatcaccgag
     2761 atcgtggtgg cgccgacctc ccggggtacg agcaccgaca cgatcttcgc caccctggag
     2821 tgtctatgag ccgcgcccgc cggtggggct tcaccctggt ggagatgctg gtcgcgatcg
     2881 tgatcctggg cctggtcgcg gcgagcctca acaagatctt caacgcccag cagcgcctcg
     2941 cggtggccca ggtggagcag gcctcggtac aggccacggt gcggaacgcc agcactattg
     3001 cctccaccga gctctgggag ctctccacca gcccggcggg ggtctccgac atcgtcaact
     3061 tcgacgcgac cggtctcagc taccgggcca tgcgtacgct gggtctcgcc tgccaggtga
     3121 gcgccaacga ggtccggctc cgggactcgt tcctttccca ataccgcagc atcatccccg
     3181 gtcaggatgc cctgctcatc ttcgtcgagc ggaacccgca gcagtcgagc gacgacagct
     3241 ggctccagct ccagatcacc tcggtgagca acggcagcag ctgcggcggc agtggcgcgg
     3301 tgcggctggg tgtcagcacc atcgacagcg cctcgctcgc cgggatcatc accgacgccc
     3361 cgattcgcac cttcgagatc atggagctcc gccccgtcac cgtggggacc cagacctggc
     3421 tcggggcccg gtcggtcagc ggtggcgaag cggccctcca gccggtggcc ggcccggtga
     3481 acgccaacgg gatccggttc acctatctcg actcgctcgg gaccgtgacc acgcaggccg
     3541 accggatccg cagcatccgg atcagtctcc tgggcgagag cgaccgggcc gcgcggcggc
     3601 tccagagcaa cgccgtcgag ctggtccagg actcgctcag caccaccatc accctgcgca
     3661 acacgccccg gccatgagcc aggccctgga ggtctccgtg tctccgtctc ttcgtcacga
     3721 ccgccgcggc atcgcgctgg cgctggcgct gttcgccacc gtcatcgcga cgctgatcat
     3781 caccgcggtg ttctacatcg cgcggctgga acagcggatg ggcaacaacc gcatcgccag
     3841 catgcaggcc cgcgaggcgg ccgagaccgg tctctcggcc gtgctggcca actggagcac
     3901 cgccacgtac aacacgatgg cgaacagcgc gaccttgtct atcccgcaga cggccgtggg
     3961 tggcggcgcg agctacaccg gcatcctccg ccgtctcacc ccgacgacgt tcctgatctc
     4021 ggtcaacggc gagtaccggg tgggcggcca ggtgatcacc cggcgccagc tcgcgcgcat
     4081 cgtgcggctc acccagccct cgatcaacat gaacgcggcg gtgaccaccc gcgtgggcat
     4141 cacggtcagt ggctcctcgc aggtgagcgg tgtcgactcg gtccccagca cctggggagg
     4201 ccagtgcccg cccccgggcg cgacccagcc cggcatccgc gattcgagcg gcaacgtgac
     4261 cacctcgggc gcctgtagcg gggcgtcgtg catcgccggc agcccccgga tcctgaccga
     4321 cccggccgtg aactcgggca ccttcaatca gtttggcgac gtgggtttca atgaactcgc
     4381 cgcgctggcc gacaagacca tcagtggcac cgtgaccggc atcgggccga ccatcaacac
     4441 cggtccaccc gtggcgtgcc ggatcggcga ctacaccaac tggggcgatc cactcaaccc
     4501 cgcgagcgtc tgcggcaact acttccccat catctacgcc ccggacgacg tgcgcctctc
     4561 gggcggctgg ggccagggca ttctcctggt cgcaggcgac ctcgagatcg ccggcggtgt
     4621 cgagttctac ggtcccgtca ttgtgcaggg gcgcattcgc tccaccggta ccggtggcca
     4681 tatctacggc ggtctcatgg cggccaacgc cgacttctcg gtctcgctgc tctccggcaa
     4741 ctcggtggtg aacttctcca gctgcgccat caaccgcgcc ctcaacggct cggcccgcgc
     4801 caaggccatc cgggagcgga gctgggcgca ggtgtactag gcggcaaggc ggcaaggcgg
     4861 caaagcggac agtgaaaaac aggaagggcg ggctcctcga ggaacccgcc cttcatgctt
     4921 ttcctgcccg ccttgcc
//
LOCUS       DATIFF010000356         2112 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_816321, whole genome shotgun sequence.
ACCESSION   DATIFF010000356 DATIFF010000000
VERSION     DATIFF010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_816321"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            101..568
                     /locus_tag="VLD58_05330"
     CDS             101..568
                     /locus_tag="VLD58_05330"
                     /inference="COORDINATES: protein motif:HMM:NF024644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HSB53753.1"
                     /translation="MSRMIVVDHAKCTNCRMCELACSLVKTGAFAPSRSRIRIHVFAE
                     EFKYVPLACFQCASAPCVKVCPAGALVQGDGLVRFVPEACIGCRMCMLGCPFGVISFD
                     SEAGLIAKCDTCGGDPECVRFCTPRALEFRESQLADVPKGRDFARRIVEAAKA"
     gene            832..1782
                     /locus_tag="VLD58_05335"
     CDS             832..1782
                     /locus_tag="VLD58_05335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011954873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HSB53754.1"
                     /translation="MSAEPVCVGIDVAKASLEVAVHPPADRWAVDYTDPAVATLVTRL
                     TALAPALIVLEATGGLEVPLVGALAAAGLPVVVVNPRQVRDFAKATGQLAKTDTLDAA
                     VLAHFAAAVRPPLRPLPDPATQALAALVTRRRQLIGMLTAERNRLGCAPKVLHKELQT
                     HIRWLERRIASLDTDLDQAIRTSPVWRAQADLLRSVPGVGPVVARTLLAQLPELGTLD
                     HKTIAALVGVAPLNRDSGLFRGRRTVWGGRATVRAVLYMGTLTAVRFNPVLRAFYLRL
                     RAAGKLPKVALTACMHKLLTILNALLKHQRRWDPTYAQTR"
BASE COUNT          307 a          734 c          722 g          349 t
ORIGIN      
        1 tgcgcggctg gagcgagacg ggtacgccca ccgaggcgag acttacggag ctgggcctgg
       61 cggacgtggt cggacagctc gcgggcaaag gagacggccg atgagtcgca tgatcgtcgt
      121 ggatcacgcc aagtgcacca actgccggat gtgcgagctg gcctgttcgc tcgtgaagac
      181 cggcgccttc gccccctcga ggagccgcat ccggatccat gtctttgccg aggagttcaa
      241 gtacgtcccg ctcgcgtgct tccagtgcgc ctcggcgccc tgcgtcaagg tgtgtccggc
      301 cggcgccctc gtgcagggcg acggcctggt gcgcttcgtg ccggaggcct gcatcggctg
      361 ccgcatgtgc atgctcggct gcccgttcgg tgtgatctcg ttcgacagcg aggcggggtt
      421 gatcgccaaa tgcgacacct gcggcggcga tcccgagtgc gtgcggttct gcacgccgcg
      481 cgccctggag ttccgggagt cgcaactggc ggacgtgccc aagggacgcg atttcgcgcg
      541 ccggatcgtg gaggcggcga aggcatgaca ggctgctgaa aacggcccat ctacagcgtt
      601 ggcgcgcttg ggcactcgtt gcggcgtacc acccagtacg ccttgtatct tacagagagc
      661 tcgccgaatg gtagactgcg atctgcatcg ggccgtgaca gaccgatacg cctccggtcc
      721 caggagaccg tgagtgagcg cgggtcgtca cggcccctcc ctgcacagcc cggacagtcg
      781 ccagggcccc cgagcccgca tccggcaagg ccgggcactc aggaggatcg catgagcgct
      841 gagccggtgt gcgtcggcat cgatgtcgcc aaggcgtccc tcgaagtggc cgtgcacccg
      901 ccggcggacc ggtgggcggt ggactacacg gacccggcgg tggccacgct ggtcacccgt
      961 ctgacggccc tcgcccccgc gctcatcgtc ctggaggcca ccggcggcct ggaggtgccc
     1021 ttggtcgggg cgctcgccgc cgccggcctc cccgtcgtgg tggtcaatcc ccgccaggtg
     1081 cgggacttcg ccaaagcgac cggccagctg gcgaagactg atacgctgga cgccgccgtc
     1141 ctcgcccact tcgcggcggc ggtgcgcccg cccctccggc ccctccccga tccggccacc
     1201 caggccctgg cggccctggt gacccgccgc cggcagctca tcgggatgct gaccgcggaa
     1261 cggaaccggc tcggttgcgc ccccaaggtg ttgcacaagg aactccagac gcacatccgg
     1321 tggctcgagc gccggattgc gagcctcgac acggacctcg atcaggccat ccgcacgagc
     1381 ccggtctggc gcgcccaggc cgacctcctc cgcagcgtgc cgggggtcgg cccagtggtg
     1441 gcccgcaccc ttttggcaca actcccggaa ctcggcacat tggaccacaa gacgatcgcc
     1501 gccttggtcg gcgtggcccc gctcaaccgg gacagcggcc tgttccgcgg acgccgcacg
     1561 gtctggggcg gccgggccac cgtccgggcg gtgctgtaca tgggcacctt gaccgcggtg
     1621 cggttcaacc ccgtgctccg ggccttctac ctgcgcctgc gggccgcggg gaaactgccc
     1681 aaggtcgccc tcaccgcgtg tatgcacaag cttctcacga tcctgaacgc gctgctcaag
     1741 catcagcggc gctgggaccc gacgtatgcc cagacgcgct aagaatccgg ttgacggcga
     1801 ccacagtcgc tcactcgccc tgcggcgcgt cgccttgcat ctaggccttt ttgagcaggc
     1861 tggggaagag cgagttcttc ggcaaactgc gaatgcggat gtgggcgaga cgcttctcgc
     1921 cctgtgttgc gagcaaaggt gagatgatcc agtacgcggc cgccatattc ctgggcgcgt
     1981 ttctgctgtt cctggtgcag cccatcatcg ccaagcagat cctgccgtgg ttcggcgggt
     2041 cggcggcggt gtgggcgacg tgcatggtct tcttccaggt ggtcctgctg atcggctaca
     2101 cgtacgccga cg
//
LOCUS       DATIFF010000357         5068 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_816543, whole genome shotgun sequence.
ACCESSION   DATIFF010000357 DATIFF010000000
VERSION     DATIFF010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5068
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_816543"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            251..490
                     /locus_tag="VLD58_05340"
     CDS             251..490
                     /locus_tag="VLD58_05340"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HSB53755.1"
                     /translation="MQVLLFASYAEQAGRSTVALTLPGPATVQDVLRQLRASLPGADR
                     LPEQPLAAVNQVHARLSSPVQDGDEIAFLPPLAGG"
     gene            494..946
                     /locus_tag="VLD58_05345"
     CDS             494..946
                     /locus_tag="VLD58_05345"
                     /inference="COORDINATES: protein motif:HMM:NF014448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HSB53756.1"
                     /translation="MTRYLTHQSIELAPLVAGVSGPERGGIATFLGLVRNHQDGRQVL
                     RLEYSAYEPMAEAESARIVAEACGRWPVQVALLHRLGALAIGDAAVAVVAASAHRAAA
                     FDACRYVIEEVKRRVPVWKKEFYADGAVQWVDPTRPGAARPPEAVPVE"
     gene            943..1980
                     /gene="moaA"
                     /locus_tag="VLD58_05350"
     CDS             943..1980
                     /gene="moaA"
                     /locus_tag="VLD58_05350"
                     /EC_number="4.1.99.22"
                     /inference="COORDINATES: protein motif:HMM:TIGR02666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HSB53757.1"
                     /translation="MTQTRVLDQFSRPLGSLRISVTDRCNMRCRYCMPEANYVWLPRA
                     AILSFEEIDRLVAIFSSLGVGKIRLTGGEPLLRHDVVSLVRMIHRREKIHDIALTTNG
                     ILLAQNAELLKDAGLSRINVSLDTLQPERMKQFAQSARHADVLEGIAAAQAAGFTGIK
                     VNSVVIRGFNDDELIPLLEFGRERAVELRFIEYMDVGGATGWSMAEVVSRKEMLERLE
                     RHFGPIEALPTEPGNPAPAERFRLADGTRFGIIASTTEPFCRTCDRARLTADGFFLLC
                     LYAANGLDLRAPLRDGATDEELAGLIRDAWTARNDRGAEQRATEAARGALYQLSTLRA
                     DPHKEMHTRGG"
     gene            2008..2604
                     /locus_tag="VLD58_05355"
     CDS             2008..2604
                     /locus_tag="VLD58_05355"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HSB53758.1"
                     /translation="MSLHIALIEPKIPPNTGNIARLCAATDTPLHLIEPLGFSLDQRE
                     VKRAGLDYWDQVDLWVHPNWFRFRDAISRERCLYFSANAEQDYRKAPFAANSVLIFGS
                     ETDGLPQKILDKHPERCYRIPMPGDVRSLNLANAVSIVLYEGLRQLGVTDLPAEAAEF
                     AAEEPETTEPDGAKAKAARGRSRGRGRGRGRGRARPAQ"
     gene            2720..3646
                     /gene="mdh"
                     /locus_tag="VLD58_05360"
     CDS             2720..3646
                     /gene="mdh"
                     /locus_tag="VLD58_05360"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HSB53759.1"
                     /translation="MLNKITVVGAGNVGATAAQRVAEKNLARTVVMVDVVEGIPQGKG
                     LDQWESAPIEGFDSRVIGSNGYDAAAGSELFIVTAGIARKPGMSRDDLVKTNAGIVES
                     VSKEIKRVAPNSIIIVVSNPLDVMCYVAMKASGFPRERVIGMAGVLDTARYRAFLAEA
                     VDVSVEDIQAMVLGGHGDTMVPLISYTTVSGIPITQLLAKEKLDAIVTRARNGGAEIV
                     NFLKTGSAYYAPSSAAVQMAEAIVLDKKRILPCAAWLTGEFGLKDVFCGVPCKLGRKG
                     LEQIVEIELAADERAALHKSAESVRDTMKALG"
     gene            3649..4308
                     /locus_tag="VLD58_05365"
     CDS             3649..4308
                     /locus_tag="VLD58_05365"
                     /inference="COORDINATES: protein motif:HMM:TIGR02046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase cytochrome b subunit"
                     /protein_id="HSB53760.1"
                     /translation="MNRFAQFWSSTLGKKVVMGVTGLIMVGFVIAHMLGNLQAFESAE
                     KFNAYGAMLQGPLHEVVLALRVVLLVSVLLHIVAAYQLTMRSRSARPVGYARTEPQMS
                     TLASRTIRIGGIVLLLFIPYHLLHFTTGDVHPDFIRGDVYHNLVTGLARPGVAIFYVV
                     AMLALGLHLYHGAWSAFRTMGVGPEDPHPRHRPLTTLVAVVVWLGFTSIPVAVLLGWL
                     K"
     gene            4438..>5068
                     /locus_tag="VLD58_05370"
     CDS             4438..>5068
                     /locus_tag="VLD58_05370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HSB53761.1"
                     /translation="MNLDSKIPSGPIQDKWDRHRFEMKLVNPANKRKYSVIVVGSGLA
                     GGAAAATLGELGYNVSCFCFQDSPRRAHSIAAQGGINAAKNYRNDGDSVYRLFYDTVK
                     GGDFRAREANVYRLAQISVEIIDQCVAQGVPFAREYGGLLANRSFGGAQVSRTFYARG
                     QTGQQLLLGAYQALSRQIAERRVEMHPRTEMLDLVVVDGRARGIITRDLV"
BASE COUNT          810 a         1691 c         1719 g          848 t
ORIGIN      
        1 ggaccggaga cccggtggag gtggctgcgc gtccggtgcc ggtcttcaag cccagcaagg
       61 agttgcgggc tctcgtggca gatgagccgt acgaagagga ctcctcggcc gagagcccca
      121 tcgcctgaga gggctccttc cggctctccc gcagggcggg tcttcggacc cgccctttcg
      181 cgcttctaac ccccggcgac cattatcttt gggcatgacc attagttcga agtcccccgg
      241 cgctgtcgcg gtgcaggtcc tccttttcgc cagctacgcg gaacaggctg gccggagcac
      301 cgtggcgctc accctgccgg gccccgccac cgtgcaggac gtgctgcggc agctccgggc
      361 ctcgctcccg ggggccgatc gcctcccgga gcagccgctc gccgcggtga atcaggtgca
      421 tgcgcgcctc tcctcaccag tgcaggatgg ggatgagatc gcgttccttc cgccgctggc
      481 aggtgggtga accatgaccc gctatctcac tcatcagtcc atcgagctgg cgccgctggt
      541 cgcgggggtg agcggtcccg aacgcggtgg catcgccacg ttcctggggc tggtgcggaa
      601 tcaccaggac ggccggcagg ttctccggct cgagtactcg gcctacgagc cgatggccga
      661 ggccgaatct gcgcgcatcg tcgccgaggc gtgcggccgc tggccggtgc aggtcgcgtt
      721 gctccatcgg ctgggtgcgc tcgcaatcgg cgatgcggct gttgccgtgg tcgccgcgag
      781 cgcccatcgg gccgcggcgt tcgatgcctg ccgctatgtg atcgaggagg tgaagcggcg
      841 ggtcccggtc tggaagaagg agttctacgc cgacggcgcg gtgcagtggg tcgatcccac
      901 ccggcctggc gcggctcgtc ctcccgaggc tgtgccggtc gagtgaccca gacccgcgtg
      961 ctcgaccagt tctcccgccc gctcgggagc ctccgcatct cggtgaccga ccgctgcaac
     1021 atgcggtgcc gctactgcat gcccgaggcg aactacgtct ggctcccgcg ggcggcgata
     1081 ctgtcgttcg aagagatcga ccggctggtg gcgatcttct cgagcctggg agtgggcaag
     1141 atccggctca ctggggggga gccgctgctc cggcacgacg tcgtctcgct ggtgcggatg
     1201 atccaccgcc gggagaagat ccacgacatc gcgctcacca ccaacggaat cctgctggcc
     1261 cagaacgccg agctcctcaa ggacgcgggg ctcagccgga tcaacgtcag tctcgacacg
     1321 ctccagccgg agcggatgaa gcagttcgct cagtcggcgc ggcatgccga tgtgctcgag
     1381 gggattgcgg cggcccaggc agcggggttc accggcatca aggtgaacag cgtggtgatc
     1441 cgcgggttca acgacgatga actgatcccg ttgctcgagt tcggccggga acgagcggtc
     1501 gagctccgct tcattgaata catggacgtc ggcggggcca ccgggtggtc gatggcggag
     1561 gtggtgtcac ggaaggagat gctggaacgg ctggagcggc acttcgggcc gatcgaggcg
     1621 ctgccgacag agccgggcaa tcctgcccct gcggagcgct tccgtctggc cgacggtacc
     1681 cgcttcggga tcattgccag caccaccgag ccgttctgcc gcacctgcga ccgcgcccgc
     1741 ctcaccgccg acgggttctt cctgctctgc ctgtacgccg ccaacggcct cgacctgcgg
     1801 gcgccgctgc gtgacggcgc caccgacgag gagctggcgg gtctcatccg cgacgcctgg
     1861 acggcccgga acgatcgcgg tgcggaacag cgtgcgaccg aagcggcccg gggagcgctc
     1921 taccagttga gcaccctgcg ggccgatcct cacaaggaaa tgcatacccg gggcggctga
     1981 cctggcccct ttcacccgcg agcgatcatg tccctgcata tcgcgctcat cgagccgaag
     2041 attccgccca acaccggcaa catcgcccgg ttgtgtgccg ccaccgatac cccgctgcat
     2101 ctcatcgagc cgctcggctt cagcctggac cagcgggagg tcaagcgcgc cggcctcgac
     2161 tactgggacc aggtcgatct ctgggtccat cccaactggt tccgcttccg cgatgcgatc
     2221 agccgggagc ggtgtctcta cttctcggcc aacgcggaac aggactaccg caaggcgccg
     2281 ttcgcggcca acagtgtgct gatcttcgga agcgagaccg acggcctgcc gcagaagatt
     2341 ctcgacaagc atccggagcg ctgctaccgg atcccgatgc cgggcgacgt gcggagcctc
     2401 aacctcgcca acgcggtgag catcgtgctg tacgaagggc tccgtcagct gggcgtgacg
     2461 gacctccccg ccgaggccgc tgagtttgcc gccgaggagc ccgaaacgac tgagccggat
     2521 ggtgccaagg ccaaggccgc acgagggcgt tcgagaggac gtggtcgcgg ccgcggacgg
     2581 ggccgggcgc gcccggcgca gtaggcttga aagccgatac agggctttgc cgggctccgc
     2641 ggcgggagta actttcccgc ccggaaagcc agtctgcccg ctccctgatt agcgactcta
     2701 gacccgcgaa ttcacaccca tgctgaacaa gatcaccgtt gtcggtgccg gaaatgtggg
     2761 cgccaccgcg gcgcagcgtg ttgccgagaa gaacctggcc cgcaccgtgg tcatggtcga
     2821 cgtcgtcgaa ggcattcccc agggcaaggg cctcgatcag tgggagtcgg cccccatcga
     2881 agggttcgac agccgggtga tcggcagcaa cggctacgac gcggccgccg gctcggaact
     2941 gttcatcgtc accgccggca tcgcccggaa gccggggatg agccgtgacg acctggtaaa
     3001 gaccaatgcg gggatcgtgg agtcggtctc gaaggagatc aagcgggtcg ccccgaattc
     3061 gatcatcatc gtggtgtcga acccgctcga cgtgatgtgc tacgtggcga tgaaggccag
     3121 cggcttcccc cgtgagcggg tgatcggcat ggctggcgtg ctcgataccg cccgctaccg
     3181 cgccttcctg gccgaggcgg tcgacgtctc ggtggaagac atccaggcga tggtgctggg
     3241 tggccacggc gacacgatgg tgccgctcat ttcctacacc acggtctcgg ggattccgat
     3301 cacccagctc ctcgccaagg agaagctcga cgcgatcgtg acccgggccc ggaacggcgg
     3361 tgccgagatc gtgaacttcc tcaagaccgg ttcggcctac tacgccccga gctccgccgc
     3421 ggtgcagatg gccgaagcca tcgtgctcga caagaagcgg atcctcccct gtgccgcgtg
     3481 gctcaccggg gagttcgggc tcaaggacgt cttctgcggc gtaccctgca agctgggccg
     3541 caagggcctg gagcagatcg tcgaaatcga gcttgccgcg gatgagagag ccgctctgca
     3601 caagagcgcg gagtcggtac gggacacgat gaaggcgctg ggctgatcgt gaatcgtttc
     3661 gcccagttct ggagctccac gctcggcaag aaggtggtga tgggggtgac gggcctgatc
     3721 atggtcgggt tcgtgatcgc ccacatgctc ggcaacctgc aggcgttcga gagcgccgag
     3781 aagttcaacg cctacggagc catgctccag gggccgctgc acgaggtggt gctcgcgctc
     3841 cgggtggtgc tcctggtgag tgtcctcctg cacatcgtgg cggcctacca gctcacgatg
     3901 cgaagccggt cggcgcggcc ggtgggctat gccaggaccg agccccagat gtcgaccctg
     3961 gcctcgcgca ccatccggat cggcgggatc gtcctgctgc tcttcatccc gtaccatctg
     4021 ctccacttca ccaccggcga cgtgcacccg gacttcatcc gtggtgacgt ctaccacaac
     4081 ctggtcaccg gcctggcgcg gcccggggtc gcgatcttct acgtcgtggc catgctggcg
     4141 ctcgggctcc atctctatca cggtgcctgg tcagccttcc gtacgatggg ggttggtccc
     4201 gaggatcccc acccccgcca tcggccgctg acgacgctgg tggcggtggt cgtgtggctg
     4261 ggcttcacgt cgatcccggt ggcggtgttg ctggggtggc tgaagtagcc gttggccatt
     4321 agccgttggc ctttaggtga tccgtggcgg ggcaggtccg gcgcagatgt cgacccactt
     4381 gggtcctgaa attcactagc taatggctaa cggctaacgg ctaacggccc tttcccaatg
     4441 aacctcgact ccaagatccc ttccggcccg atccaggata agtgggatcg gcaccgcttc
     4501 gagatgaagc tggtgaatcc ggccaacaag cggaaatact ccgtcatcgt ggtgggatcc
     4561 ggcctggccg gcggcgccgc agcggcgacc ctcggcgagc tgggctacaa cgtcagctgt
     4621 ttctgcttcc aggactcgcc ccggcgggcc cactcgatcg cggcgcaggg cgggatcaac
     4681 gcggccaaga actaccggaa cgacggggac agcgtgtacc ggctgttcta cgacacggtc
     4741 aagggcggcg acttccgggc ccgcgaagcc aacgtgtacc ggctggcgca gatcagcgtc
     4801 gagatcatcg accagtgcgt ggcgcagggc gtgccctttg cgcgcgagta cggcggcctc
     4861 ctcgccaacc ggtcgttcgg cggcgcgcag gtatcgcgca ccttctacgc ccgcgggcag
     4921 accggccagc agctcctgct cggcgcctac caggcgctgt cgcgccagat cgccgagcgc
     4981 cgggtcgaga tgcacccacg cacggagatg ctcgacctcg tggtcgtcga cggccgcgct
     5041 cgcggcatca tcacccgcga cctcgtga
//
LOCUS       DATIFF010000358         1993 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_355552, whole genome shotgun sequence.
ACCESSION   DATIFF010000358 DATIFF010000000
VERSION     DATIFF010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1993)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1993)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1993
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_355552"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..582)
                     /locus_tag="VLD58_05375"
     CDS             complement(<1..582)
                     /locus_tag="VLD58_05375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSB53762.1"
                     /translation="MHPARDHHLPPDPDAYRHAPHPKGRIIVIAPTRAACETIELALG
                     ATFETLLQRQHGHTLREWAGRGIGFGIVAGTGTGKTLGIRPIAETILQEPLRFGVVNR
                     EREATPDTPSWNVVVVTTGIARHWFQGELITAADTLVVDEIHQTSAELELCLALGKRV
                     GCRFIWLSATVDPAFYARYLHSTEVLETSAFDPA"
     gene            complement(619..>1993)
                     /locus_tag="VLD58_05380"
     CDS             complement(619..>1993)
                     /locus_tag="VLD58_05380"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HSB53763.1"
                     /translation="HTGRLMFSLFRAKGYEIYAIDTPERLAHRPAPLPGRPGELPPVD
                     RTSALAGLLASAAAGLPADTSYPVRPYHAGLSLTYVGQPSLIAGSSQFGTYVGGGAAL
                     YWSDLLANHNLTTALQVNGGIKDVTGVVAYQDLGSRLNWGVAAQQIPYLTGAFAEGTT
                     TVNGEPALVEQRLLDRQTNRSLQGIVAYPFSEVQRVELTGSLTHISFDRELRTQAFSL
                     LSGDRLVNETQNLATGDPLTLGSASAALVYDNSFFGATGPILGQRYRLEATPTFGSIA
                     FVGVLGDWRRYFMPVRPFTIAARLLHYGRYGGGGEDQRLQPLFLGYPGLVRGYRYGSF
                     DASECNPPAGDPNSCPVFDRLLGSRIAVANLELRFPLFGALGIGPGYYGILPLDWIAF
                     GDAGLAWQSNIDPSFAGGDRKPVFSAGTGFRFNLFGFAVAEVNLVHPFDRPAKHWIWE
                     LNLQPGF"
BASE COUNT          311 a          659 c          734 g          289 t
ORIGIN      
        1 cgccggatcg aaggcgctgg tctcgagaac ctccgtgctg tggaggtagc gggcgtagaa
       61 ggctgggtcc acggtggcgc tcagccagat gaagcggcac ccgacccgct tgccgagcgc
      121 aagacagagt tcgagctcgg ccgaggtctg gtggatctcg tccaccacca gcgtgtctgc
      181 cgcggtgatg agctccccct ggaaccagtg cctggcaatc ccggtcgtga ccactaccac
      241 gttccacgag ggcgtgtccg gcgtcgcctc gcgctcgcga ttgaccacgc cgaagcggag
      301 cggctcctgc agaatcgtct ccgcgatcgg gcggatgccg agggtcttgc cggtgccggt
      361 gccagcgacg atcccgaagc cgatcccccg gccggcccac tcgcggagcg tgtgcccgtg
      421 ctgccgctgg agcagcgtct cgaaggtggc gcccagggcg agctcgatcg tctcgcacgc
      481 cgcgcgggtg ggggcgatga cgatgatccg ccccttcgga tggggggcgt ggcggtaggc
      541 gtcgggatcg ggggggagat ggtggtcgcg ggcgggatgc atcgctgtaa ggtatcagct
      601 atccccccgg gcctcaggtc agaatcccgg ctgcaggttc aactcccaga tccagtgctt
      661 ggccggccgg tcgaaggggt ggaccaggtt cacctccgcc acggcgaaac cgaacaggtt
      721 gaaccggaac ccggtgccgg cgctgaacac cggcttgcgg tcgccgccgg cgaagctggg
      781 gtcgatgttg ctctgccagg ccagcccggc gtcgccgaac gcgatccagt ccaggggcag
      841 gatcccgtag taccccgggc cgatgccgag cgccccgaag agcggaaagc gaagctccag
      901 gttggccacc gcgatgcggc tgccgagcag gcggtcgaac accgggcagc tgttcgggtc
      961 gccggccggg gggttgcact cggaggcatc gaaggatccg tagcgatagc cgcgcaccag
     1021 cccggggtag cccaggaaga gcggctgcag ccgctggtcc tcgcccccgc cgccgtagcg
     1081 cccgtagtgc agcagccggg cggcgatggt gaacggacgc accggcatga agtagcgacg
     1141 ccagtcgccc agcacgccga cgaacgcgat cgacccgaaa gtgggcgtgg cctcgaggcg
     1201 ataccgctgg cccagaatcg ggccggtggc cccgaagaag gagttgtcgt agaccagcgc
     1261 cgccgaggcg ctcccgaggg tgagcggatc gccggtcgcg aggttctggg tctcgttgac
     1321 gagccggtcg ccgctgagca gcgagaaggc ctgagtcctg agctcccggt cgaaggagat
     1381 gtgggtgagg ctcccggtga gctccacccg ctgcacctcg ctgaaggggt acgcgacgat
     1441 cccctggagc gagcggttgg tctgccggtc gagcaggcgc tgttccacca gggccggctc
     1501 cccgttcacg gtcgtcgtgc cctcggcgaa cgcaccggtg agatagggga tctgctgcgc
     1561 cgccacaccc cagttcagcc ggcttcccag gtcctggtag gcaacgacgc cggtcacgtc
     1621 cttgatccct ccgttgacct gcagcgcggt ggtcagattg tggttggcca gcaggtcgct
     1681 ccagtacagg gcggcccctc ctcccacata ggtgccgaac tggctcgacc ccgcgatcag
     1741 cgaaggctgg cccacatagg tgagggagag ccccgcgtga tacggccgga ccggataact
     1801 cgtgtcggcc ggcagcccgg ctgcggctga ggcgaggagc ccggcgagcg cggaggttcg
     1861 atccaccggc ggcagctcgc cgggccgccc gggcagcggg gcgggccggt gcgccagccg
     1921 ctccggcgtg tcgatggcgt agatctcgta gcccttggcc cggaacaggc tgaacatgag
     1981 ccggccggtg tgc
//
LOCUS       DATIFF010000359         3631 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1895000, whole genome shotgun sequence.
ACCESSION   DATIFF010000359 DATIFF010000000
VERSION     DATIFF010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3631
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1895000"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            95..1819
                     /gene="dnaX"
                     /locus_tag="VLD58_05385"
     CDS             95..1819
                     /gene="dnaX"
                     /locus_tag="VLD58_05385"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR02397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HSB53764.1"
                     /translation="MALALARKYRPRRFSDLLVQDHVASVLRGAVVKNRVGHGYLLTG
                     PCGVGKTTAARILAMALNCERKGQIVPAGEPCGECESCLRIWTGGAGLDVVEIDAASN
                     RGVDDARELRERAMYAASREGHHKVYIVDEAHMLTREAWNALLKILEEPPPGVVFVFA
                     TTEPQKIAQTAAPVLSRLQRFDFRRIGAAAIRERLIAVLAAEQIEADEDALTLIARQA
                     DGGMRDALSVLDQCLSFGEGRVTAQRVREILGLVADEVYGELITLLVQQSPAGVFALV
                     DRLEDAGADLIEFLGQAGEVLRAMLMLKLGTRPEGLTEALRQALERHLDQLEPGDLLR
                     MLKVLAETEPSLRRTGNPRLGVETLLLRWTMMDRTVNLAQVLAGGDAGRPGGQAGGRS
                     EGRSSPLPTSPAQAPGATGPIAHTAESPALSSRPAVEPAVRPPDRPTAPRIRGELTLE
                     SLAQAWPDLTQVARDQSRFLGEAVNAARPVGISGAEVKLALPDGNPIHLEALGHQRSA
                     VERLLSEAAGRPITIAIARTGAESTSAAPRRRLSESEARAERLKVLKTRDPALEAAAE
                     ALDLEVLE"
     gene            1897..2205
                     /locus_tag="VLD58_05390"
     CDS             1897..2205
                     /locus_tag="VLD58_05390"
                     /inference="COORDINATES: protein motif:HMM:TIGR00103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HSB53765.1"
                     /translation="MADWPQLYQLGQQMQGRLQQLQHELADKTYEAQAGGGLVRVTVD
                     GKGTVRSLDLDPAVFEGRDADLLADLILGAIAEGQRRAAEALQLEVRRMGPLPFNLPL
                     "
     gene            2212..2802
                     /gene="recR"
                     /locus_tag="VLD58_05395"
     CDS             2212..2802
                     /gene="recR"
                     /locus_tag="VLD58_05395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HSB53766.1"
                     /translation="MAALEDLVTELARLPGIGRKTAQRLAFHLVQQPGERLARLAQAL
                     VTVAERVHPCAECGNLAEGERCDLCVDPRRDAGIICVVEEPSAVTILEKSGEYRGKYH
                     VLGGRIDPLAGIGPEALRLDRLLARVEAGGVREIILATNPSMEGEVTATFVQQMLSGK
                     GVKVTRLARGLPVGGDLEYIDGVTLAHALTARQEIS"
     gene            2802..3068
                     /locus_tag="VLD58_05400"
     CDS             2802..3068
                     /locus_tag="VLD58_05400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53767.1"
                     /translation="MLRRLALIAGIAAGVAAGWMLTQDRIRHHRADLFSRRPLRRMAA
                     LAGLRAEPGVETVRLLRDYLEWERHPVLRRRARGIVRRMEAALG"
     gene            3082..3576
                     /locus_tag="VLD58_05405"
     CDS             3082..3576
                     /locus_tag="VLD58_05405"
                     /inference="COORDINATES: protein motif:HMM:NF015232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HSB53768.1"
                     /translation="MPPGASSWSFREEDSNRIHAILSGFLRESNARTGMIVDRTGQMV
                     AVVGEEPSFDPTAFASLTAADFSANDQLARMIGEPEFGSLFHQGEKESMYLADIARRV
                     ILVVLFDNRTTLGLVKLRVRGTVIELRLVFEEMFTRGTSGQAQVETGFLGEAEDEIDK
                     LFGA"
BASE COUNT          558 a         1235 c         1249 g          589 t
ORIGIN      
        1 ggtgtcgctt cggggagcct ggggcacttt tcttttcccg accttcgtcc ggccgccccc
       61 tccacccgct tggctcccgc ggctaccttc ccgcatggct ctggcgctcg cccggaagta
      121 ccgtccccgt cgattcagtg atctcctggt tcaggaccat gtcgcgagtg tgcttcgcgg
      181 cgcggtggtc aagaatcggg tgggtcacgg ctatctgctc accggtccct gcggggttgg
      241 caagaccacc gcggcccgga tcctcgccat ggcgctcaac tgcgagcgca aaggccagat
      301 cgtgcccgcg ggcgagccct gcggggaatg tgagagttgc ctccggatct ggaccggcgg
      361 ggccggcctc gacgtggtcg aaatcgacgc cgccagcaac cgcggggtcg acgatgcccg
      421 cgaactccgc gagcgggcga tgtacgccgc ctcgcgcgaa gggcaccaca aggtctacat
      481 cgtcgacgaa gcccacatgc tcacccgcga ggcgtggaac gcgctcctca agattctcga
      541 ggagccgccg cccggggtgg tcttcgtctt cgccaccacc gagccgcaga agatcgccca
      601 gaccgcggct ccggtgctct cccggctcca gcgcttcgat ttccggcgca tcggcgcggc
      661 cgcgatccgc gagcggctca tcgcggtcct cgccgccgag cagatcgagg ccgatgagga
      721 cgcgctgacg ctcattgcgc ggcaggccga cgggggcatg cgggacgccc tctcggtgct
      781 cgaccagtgc ctctccttcg gtgagggccg ggtaaccgcc cagcgggtcc gcgagatcct
      841 gggcctggtg gcggacgagg tgtacggcga gctgatcacc ctgctggtgc agcagtcgcc
      901 ggccggcgtt tttgccctgg ttgaccggct ggaggatgcc ggggccgatc tcatcgagtt
      961 ccttggccag gctggcgaag tcctccgcgc catgctgatg ctcaagctcg gcacccggcc
     1021 ggaagggctg acagaggcgc tccggcaggc cctggaacgt cacctcgatc agctcgagcc
     1081 cggcgacctt ctccgcatgc tcaaggtgct ggccgagacc gagccatccc ttcgccgcac
     1141 cgggaacccg cgcctcggtg tggaaaccct gctgctccgc tggaccatga tggacaggac
     1201 ggtgaacctg gcccaggtgc tcgccggcgg tgacgccggg cggcctggcg gtcaggcggg
     1261 cgggcggtcc gaaggccgca gcagtccact tccgacctcg ccagctcagg ctcccggcgc
     1321 gacgggccca atcgctcaca ctgccgaatc cccagcgctg tcgagccgac cggcggttga
     1381 acctgcggtc cgaccgcctg accgcccgac tgcccctcgt attcggggcg agctgaccct
     1441 ggaatcgctg gcccaggcct ggcccgatct cacccaggta gcccgcgacc agagccgctt
     1501 tctcggcgag gcggtgaatg ccgcccgccc ggtcggcatc tcgggcgccg aggtcaagct
     1561 tgccctcccg gacggcaacc cgatccatct cgaggccctg ggccaccaac gctccgcagt
     1621 tgagcggctc ctgagcgagg cggccggccg gccgatcacc atcgccatcg cccggacggg
     1681 ggctgaatcc acctccgcgg cccctcgccg gcggctgtcc gaatccgagg cccgggccga
     1741 gcggctcaag gtcctcaaga cccgcgaccc cgccctggag gcggccgccg aagcgctcga
     1801 tctcgaggtg ctggagtagg tcgccgggtg gttgcatcta cccccgggga cacctacttt
     1861 cttctgactt tgcagggact tagcgatatt ccggctatgg cggattggcc ccagctgtac
     1921 cagttgggcc agcagatgca ggggcggctc caacagctcc agcacgaact ggccgataag
     1981 acctacgagg cccaggcagg tggcggtctg gtacgggtaa ccgtggacgg gaaggggaca
     2041 gtacggagcc tcgacctcga tcccgcggtg ttcgagggtc gtgacgccga cctcctggcc
     2101 gacctgattc tcggtgccat tgccgaggga cagcgtcgag cggccgaggc cctgcagctg
     2161 gaagtccggc gcatgggtcc cttgccgttc aaccttcccc tctagcgttt cgtggccgcg
     2221 ctcgaagacc tggtgaccga actcgccagg ctgcccggta tcggccggaa gacagcccag
     2281 cggctggcgt tccacctggt ccagcagccg ggcgagcgtc tggctcgcct ggctcaggcg
     2341 ctggtgactg tggccgaacg ggtccacccc tgcgccgagt gtggcaacct ggccgagggg
     2401 gagcgctgcg acctgtgcgt ggatccccgg cgtgacgcgg ggatcatctg cgtcgtcgag
     2461 gagccgtcgg ccgtgacgat cctcgagaaa tccggcgagt accgaggcaa ataccacgtg
     2521 ctgggcgggc ggatcgatcc gctggccggc atcggtcccg aggcgctcag gctagatcgc
     2581 ctgctcgccc gggtcgaggc cggtggggtc cgcgagatca ttctggccac caatccctcc
     2641 atggagggcg aggttacggc cacgttcgtc cagcagatgc tgagcgggaa gggtgtgaag
     2701 gtgacccggc tggcgcgggg gctgcctgta gggggcgacc tcgagtacat cgacggtgtc
     2761 accctggccc acgccctcac ggcccggcag gagatcagct gatgctccgc cgactggcgc
     2821 tgattgctgg gatcgcggcc ggagtcgcgg ccggatggat gctgacgcag gaccggatcc
     2881 ggcaccaccg ggccgatctc ttcagccgcc ggccgctccg ccgcatggcg gccctcgccg
     2941 gcctccgggc cgaacccggg gtcgaaaccg ttcggctgct gcgtgactat ctcgagtggg
     3001 agcgccaccc ggtgctccgt cggcgggcaa gagggatcgt ccgccgcatg gaagcggcgc
     3061 tcggctaaat acggggacct gatgcctcct ggcgcatcca gctggtcatt tcgggaagaa
     3121 gactccaacc ggatccatgc gatcctgtcg ggattcctgc gtgaatccaa cgccaggacc
     3181 ggcatgatcg tcgaccggac cgggcagatg gtggccgtgg tcggcgagga accctccttc
     3241 gatccgacgg ccttcgcgtc gctgacggcc gccgatttca gcgccaacga tcagctggcg
     3301 agaatgatcg gggagcccga gttcgggagt ctcttccatc agggcgaaaa agagtcgatg
     3361 tacctcgccg acatcgcccg gcgggtgatc ctggtggtgc tgttcgacaa ccgcaccacg
     3421 cttggactgg tgaagctccg ggtgcgcggc accgtgatcg agctgcggct ggtgttcgag
     3481 gagatgttca cccgcggtac cagcggtcag gcgcaggtgg aaaccgggtt cctgggcgag
     3541 gcggaagatg agatcgacaa gctattcgga gcttgaggga gaataatcag cgatgtcgat
     3601 gatcaactac gcctcccgtg agatcaactg c
//
LOCUS       DATIFF010000360         1181 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1279831, whole genome shotgun sequence.
ACCESSION   DATIFF010000360 DATIFF010000000
VERSION     DATIFF010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1181
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1279831"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..333
                     /locus_tag="VLD58_05410"
     CDS             <1..333
                     /locus_tag="VLD58_05410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53769.1"
                     /translation="TGTPRTRYGFSDGYGRYEYFLTPRGAEGRVPDSYEADLHFGYPL
                     AAGPVTVNLLLDVFNVLDAQRPILLDQRWGFQEADNSSPTPVNPNYGKPVLRTPPTSF
                     RLGVRVSF"
     gene            571..>1181
                     /locus_tag="VLD58_05415"
     CDS             571..>1181
                     /locus_tag="VLD58_05415"
                     /inference="COORDINATES: protein motif:HMM:NF015019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proton-translocating pyrophosphatase"
                     /protein_id="HSB53770.1"
                     /translation="MRSFIPHRSRLAPLGLLAAVAGLFAGAAPASASEAELILPDLGS
                     VSFLGLPGHTLLLFGLGVCVLGMVFGLVMYTRLKNLPVHRSMREISELIYETCKTYLV
                     NQGKFILLLWAFIAAIIFYYFAFLRHFSMDRVLIILAFSLVGIAGSYSVAWFGIRINT
                     FANSRSAFASLRGKPYPTYAIPLKAGMSIGTMLISTELIIMLF"
BASE COUNT          159 a          458 c          360 g          204 t
ORIGIN      
        1 accggcacgc cgcgcacccg ctacggcttc tcggacggct acggccgcta cgagtacttc
       61 ctcacccccc gcggcgccga aggcagggta ccggactcct acgaggccga cctccacttc
      121 ggctacccgc tcgcggccgg gccggtgacg gtcaacctcc tgctcgacgt cttcaacgtc
      181 ctcgacgcgc agcgcccgat cctgctcgac cagcgctggg gcttccagga ggccgacaac
      241 tcctcgccga ccccggtcaa ccccaactac ggcaagcccg tcctgcgcac cccgccgacc
      301 tccttccgcc tgggagtgcg ggtcagcttc tgaaacaggc tgcgggcggc ccggcgtttc
      361 gcccggcgcg aagcgagccg gggccggtcg gggttcggat acaatccgcc ggctaaccgg
      421 atccgctcgg cgggccgttc ccgctccgag cccggcacca gatcaggccg ccgaggcgtc
      481 ctccggggcg cctggcaggc aacgttcgcc cgtgatccgc gcggcgcccg accgggcggc
      541 cgccgggatc gctacccaga cggaggagac atgcggtcgt tcattcccca ccggtccagg
      601 ctcgccccgc tcgggctcct ggccgccgtc gccggcctct tcgccggcgc ggcgccggcc
      661 tcggccagcg aggccgagct gatcctgccc gacctcgggt cggtctcgtt cctcggcctg
      721 cccgggcaca cgctgctgct gttcggcctc ggcgtctgcg tgctcggcat ggtcttcggc
      781 ctggtgatgt acacccggct caagaacctg cccgtgcacc gctcgatgcg cgagatctcg
      841 gagctgatct acgagacctg caagacctac ctggtcaacc agggcaagtt catcctgctg
      901 ctgtgggcct tcatcgccgc gatcatcttc tactacttcg ccttcctccg gcacttctcg
      961 atggaccggg tgctgatcat cctggccttc tcgctggtcg gcatcgcggg cagctactcg
     1021 gtggcctggt tcggcatccg catcaacacc ttcgccaact cgcgctcggc cttcgcctcg
     1081 ctgcggggca agccgtatcc gacctatgcc atcccgctga aggcggggat gagcatcggc
     1141 accatgctga tcagcaccga gctgatcatc atgctcttca t
//
LOCUS       DATIFF010000361         3703 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_203643, whole genome shotgun sequence.
ACCESSION   DATIFF010000361 DATIFF010000000
VERSION     DATIFF010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3703
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203643"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1194)
                     /locus_tag="VLD58_05420"
     CDS             complement(<1..1194)
                     /locus_tag="VLD58_05420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53771.1"
                     /translation="MAEPEDVIAEGALHATRFVRELWARHSAGQGEATPRLRDFKRRL
                     ELFVGAVFPEAPEIGLAEPPAPPSWLARLARRDTAHLHADEALSSSNEERIFLPAELR
                     NLPSAAILDRYRLLALEQAARVERGSHRLIPEGALLRDLYYLSEAAAVDLLLVRTLPR
                     LASAFSEARLEAFSHWPMPRRPSPRERAVAQLLADLVGAHPARPPSPFIAAATPADSL
                     AWARVQWRSLTSLAGPYRGMAPMSLWGVAAPPGVASTKAGQDEVLSPPAGRTRTLPRR
                     PGVRDASDEEDDAESGTWMVRADDLQEKAEDPAGLMRPADRDQEADPGELADALSELP
                     ELRLVRTPGPVSEILAGEEPIARASVVPTGVTAEGLAYPEWDWRAAAYRPRAAVVREG
                     VAVSGP"
     gene            complement(1198..2034)
                     /locus_tag="VLD58_05425"
     CDS             complement(1198..2034)
                     /locus_tag="VLD58_05425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018286761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbbQ/NirQ/NorQ/GpvN family protein"
                     /protein_id="HSB53772.1"
                     /translation="MTVQRVPAAPRSLPDGLRHPGGDKPFYLPVGDEVAVFEECHRRG
                     LGVMLKGPTGCGKTRFVEHMAWRLERPLVTVACHDDLSASDLTGRWLIRGGETVWQDG
                     PLARAARVGAICYLDEVVEARQDVVVVIHPLTDDRRMLPIEKTGELIEAAPGFQLVVS
                     YNPGYQHVLKDLKPSTRQRFVSLEFDFPPAELECQVVVHEGEVDYAAAAALVELAGRV
                     RRLRDRGLPEVPSTRLLVATARLIAGGIDPVQAARVGLMGPLTDDPDLLAAIGDLITT
                     TL"
     gene            complement(2038..3402)
                     /locus_tag="VLD58_05430"
     CDS             complement(2038..3402)
                     /locus_tag="VLD58_05430"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HSB53773.1"
                     /translation="MRYRSQAVAYPYFVVALLLYGLQMVFGILSITKYLGPDPIRGIL
                     PFDVSKEVHTNVLIVWVLTGFMGATYWLVPEESRTELYSTKLAYWQLGLWTTAGVICV
                     VGYLFGWTEGNKLLEQPLPIKLGIVIVMLMFLYNIGMTIWKAKKLTTTEGVLVAGLVL
                     SAVLYLPALITFDNYTVSIYYRWWTVHLWVEGVWEMIQGGLLAYLLIRLSGADREVME
                     KWLYVIVGLTFIAGILGTAHHYFWIGVPSYWQGIGGFFSALEPLAFLGMAMYAYMAMR
                     RSGLAHPNRLALHWTIGSAVFSALGAGILGLAHTWPSVNKWTHGTMITAMHGHMAFFG
                     AYVMIVLAMITYAAPGLFGHDQDQGESSTGLWAFWLQMGGMFGMTMAFGAAGISQTYL
                     ERIMGLGYLETQHKIQVHFLMVLGTGLLFVLGVGLFLYDFFYLAPKRRAAPAAWPESA
                     EAKA"
     gene            complement(3415..>3703)
                     /locus_tag="VLD58_05435"
     CDS             complement(3415..>3703)
                     /locus_tag="VLD58_05435"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSB53774.1"
                     /translation="GCFACHSTAPGVNLVGPSLAGIAATAGERIKAADYKGKATDAAS
                     YIRESIMEPNTFLVPGATFSSNGQSMMPAGFGQSLQPSQVDALVAYLMTLK"
BASE COUNT          645 a         1251 c         1272 g          535 t
ORIGIN      
        1 cggccccgaa acggcgacgc cttcgcgcac cacggcggcc cgcggacgat aggcagcggc
       61 acgccagtcc cactcggggt acgcgagacc ttccgcggtg acgccggtcg ggaccaccga
      121 ggcgcgggcg atcggctcct cgcccgcgag gatctcactg acgggccccg gagtgcggac
      181 caggcgcagc tcgggcaact cggagagcgc gtcggccagc tcgcccgggt cggcctcctg
      241 atcgcgatcc gccgggcgca tgaggccggc cgggtcctcc gccttctcct gaaggtcgtc
      301 ggcccggacc atccaggtcc ccgactcggc atcgtcttcc tcatccgacg cgtcgcgaac
      361 gccagggcgg cggggcagcg tgcgggttcg tccggccggc ggtgacaaca cctcgtcctg
      421 acccgccttc gtcgaagcca caccgggggg cgcggcgaca ccccagagcg acatcggcgc
      481 catgccccgg tagggcccag caaggcttgt cagggatctc cactgcacgc gggcccatgc
      541 gagcgagtct gccggggtcg ccgcggcaat gaaaggagac ggcggccgcg ccgggtgggc
      601 tcccaccagg tcggccagca gctgtgcgac cgcacgctcc cgcggcgagg gacgccgagg
      661 cattggccag tgggagaagg cctcaagtct tgcctcggag aacgcactgg ccaggcgggg
      721 aagcgtccgc accaggagaa gatcgaccgc cgctgcttcg gacaagtagt acagatcgcg
      781 gaggagcgcg ccctccggga tcaggcggtg cgatccccgc tcaacccggg cggcttgctc
      841 caacgccagc agccggtagc ggtcgaggat ggcggcagaa ggaaggttcc gaagttccgc
      901 agggaggaag atgcgctcct cgttggagga ggagagcgcc tcatcggcgt ggaggtgtgc
      961 ggtgtcgcgg cgcgcgagac gggccagcca gctcgggggg gcgggtggct cggcgaggcc
     1021 gatctccggc gcctcgggga acacggcgcc cacgaagagc tcgaggcgac gcttgaagtc
     1081 acggagccgg ggagttgctt cgccctgccc cgccgagtgc ctggcccaca gctcccggac
     1141 gaagcgggtg gcgtgcaggg cgccttcggc gatgacgtct tccggctcgg ccacggccta
     1201 gagtgtggtg gtgatcaggt ccccgatggc ggcgagcagg tcgggatcgt cggtgagcgg
     1261 gcccatcagc cccacccgcg ccgcctggac cggatcgatg cctcccgcaa tcagccgcgc
     1321 ggtcgcaacc agcagccggg tactcggcac ctcgggcagt ccccggtcgc ggaggcgccg
     1381 tacccggccc gccagctcga cgagcgccgc cgcggcggcg tagtccactt cgccctcatg
     1441 caccacgacc tggcactcca gctccgccgg cgggaagtcg aactccagcg agacaaaccg
     1501 ctgccgggtg ctcggcttga gatccttgag cacatgctgg tatcccggat tgtacgacac
     1561 caccagctgg aatcccggcg ccgcttcgat aagctcacct gtcttttcga tcggcagcat
     1621 gcggcggtcg tcggtgagcg ggtgaatcac caccaccacg tcctgacgcg cctcaacgac
     1681 ttcgtccagg tagcagatgg cccccacccg cgcggcccgc gccaggggcc cgtcctgcca
     1741 caccgtttcc ccgccacgga tgagccaccg tccggtcagg tcgctggcgg agagatcgtc
     1801 gtggcaggcc accgtgacga gtggccgctc gagccgccag gccatgtgct ccacgaagcg
     1861 ggtcttcccg cagccggtcg gccccttgag catcacgccg agcccgcggc ggtggcattc
     1921 ctcgaagacg gccacctcgt cgcccacggg cagatagaag ggcttgtccc cgccgggatg
     1981 ccgaaggccg tcaggcagac ttcggggagc ggctggcacc cgttggacgg tcatgggtca
     2041 ggccttcgcc tcggcgctct cgggccaggc ggccggcgcg gcgcggcgct tcggggccag
     2101 gtagaagaag tcatagagga agagccccac cccgaggacg aagagaagcc cggtgccgag
     2161 caccatcagg aaatggacct ggatcttgtg ctgggtctcg aggtaaccga gccccatgat
     2221 ccgctcgaga taggtctggc tgatgcccgc cgcaccgaac gccatcgtca tgccgaacat
     2281 cccacccatc tggagccaga aggcccagag gccggtggac gattcgccct gatcctgatc
     2341 gtgcccgaag aggcccggtg ccgcgtaggt gatcatcgcg agcacgatca tgacataggc
     2401 accgaagaag gccatgtgcc cgtgcatcgc tgtgatcatc gtgccatggg tccacttgtt
     2461 caccgagggc caggtatggg ccagacccag gatcccggcg cccagggcgg agaacaccgc
     2521 gctgccgatc gtccagtgaa gcgccaggcg gttgggatgg gccagccccg agcggcgcat
     2581 ggccatgtag gcgtacatcg ccatgccgag gaaggcgagc ggctcgaggg cgctgaagaa
     2641 cccgccgatc ccctgccagt agctcggcac cccgatccag aagtagtggt gggccgtccc
     2701 gagaatgccg gcgatgaagg tgaggccgac gatcacgtag agccacttct ccatcacctc
     2761 gcggtcggcc ccggagagcc ggatcaggag gtaggcgagg agaccgccct ggatcatctc
     2821 ccagacacct tcgacccaca ggtgaaccgt ccaccagcgg tagtagatgc tgacggtgta
     2881 gttgtcgaag gtgatgagcg cgggcaggta gagcaccgcc gagaggacca ggccggccac
     2941 cagcacgcct tcggtggtgg tcagcttctt cgccttccag atcgtcatgc cgatattgta
     3001 gagaaacatc agcatcacga tcacgatccc gagcttgatc ggcagcggct gctccagcag
     3061 cttgttgccc tcggtccagc cgaacaggta gccgaccacg cagatcactc ccgcggtcgt
     3121 ccacagtccc agctgccagt acgccagctt cgtcgagtag agctccgtcc gggactcttc
     3181 cggcaccagc cagtaggtgg cccccatgaa cccggtgagc acccagacga taagcacatt
     3241 ggtgtgaact tccttgctta cgtcgaacgg caggatcccg cggatcggat ccggccccag
     3301 gtatttggtg atcgacagga taccgaagac catctggagc ccgtagagca gcagggccac
     3361 gacaaagtag gggtaggcga cagcctgcga gcgatagcgc atgtcagctc ccggctactt
     3421 gagggtcatg aggtaggcaa ccagcgcgtc tacctgcgac ggctggagcg attggccgaa
     3481 cccggcaggc atcatcgact gtccgttgct ggagaaggtc gcgcccggca cgaggaaggt
     3541 attgggctcc atgatcgact cgcggatgta gctggcggcg tcggtcgcct tgcccttgta
     3601 gtccgccgcc ttgatccgct cgcctgcggt ggcggcgatc ccggcgagcg agggccccac
     3661 caggtttacg ccgggcgcgg tcgaatggca ggcgaagcag ccg
//
LOCUS       DATIFF010000362         1700 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_203655, whole genome shotgun sequence.
ACCESSION   DATIFF010000362 DATIFF010000000
VERSION     DATIFF010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203655"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..311
                     /gene="upp"
                     /locus_tag="VLD58_05440"
     CDS             <1..311
                     /gene="upp"
                     /locus_tag="VLD58_05440"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HSB53775.1"
                     /translation="SLEPVRYYAKIPTEEHDRDYFVLDPMLATGGSATAAVTTLKTAG
                     AHRIRFLCIVAAPEGVRRMLDGHPDVPVFTAALDRGLDEHGFILPGLGDAGDRLFGTR
                     "
     gene            452..>1700
                     /locus_tag="VLD58_05445"
     CDS             452..>1700
                     /locus_tag="VLD58_05445"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSB53776.1"
                     /translation="MPIRLTFHGAAGQVTGSMHLVEAAGARLLLDAGLFQGRRAEAFR
                     LNSTLPVDPRRVDAIVLSHAHIDHAGRLPLLVRHGFHGPILATPATRDLSAVMLPDAA
                     HIQEKDAEYLRRRNKAGPESDPLYSLPDAVAVQDLMVGLPYRRIHHLRKHLAFEFTDA
                     GHILGSASVDLRLTEGAGHRLVFSGDIGRSALPIIRDPDPPAGPVDTLIIESTYADRS
                     HESVADAEARLGELIRRVAGRGGKLLIPAFALGRTQELIYGLHQLFRAGKIPGLPIFV
                     DSPLAVDTTAVFRLHPDLFDRDERMIERTTRLFDFPLVQYVRDVNDSKKLNSIPGPAV
                     IIAASGMVESGRILHHLANHGGDHRSVILFVGFQAEHTLGRRIQEGARTAKIFGEEVQ
                     LRAEVETIGGYSAHADRDELRAWV"
BASE COUNT          274 a          602 c          555 g          269 t
ORIGIN      
        1 attcgctcga accggtccgc tactacgcca agatcccgac cgaggagcac gaccgcgact
       61 acttcgtgct cgatcccatg ctggcgaccg gaggttcggc cacggcggcg gtcaccacgc
      121 tcaagaccgc gggcgcccat cgcatccggt tcctgtgcat cgtcgcggcg ccggaaggcg
      181 tgcgtcgcat gctggacggc cacccggacg taccggtctt taccgcggcg ctggatcgcg
      241 ggctggacga gcacggcttc atcctgccgg ggctgggcga cgccggagac aggctgttcg
      301 ggacgcggta ggaggcagat gggactgaag gaatgaggaa ccgggggagt ggagaaaggg
      361 cgtgagaggg tggcgtaccc ctccacacga cactttaccc tcgccaatcc ctccatccct
      421 caatcccccc aatccctcat tccccaatcc catgcccatt cgactgacgt tccacggcgc
      481 cgccggccag gtcaccggct cgatgcacct ggtcgaggct gcgggcgcgc ggctgctgct
      541 ggacgccggc ctgttccagg gtcgccgggc ggaggccttt cggctcaact cgacccttcc
      601 ggtggaccca cggcgggtgg acgcgatcgt cctgagccac gcacatatcg atcacgccgg
      661 ccgactgccc ctcctggtac ggcacggctt ccacggcccc atccttgcca cgcccgcgac
      721 ccgggacctt tccgcggtca tgctgccgga tgcggcccac atccaggaga aggacgccga
      781 atacctccga cgccggaaca aggccggccc ggaaagcgac ccactctact ccctgccgga
      841 cgccgtcgcc gtacaggacc tgatggtggg attgccgtac cgccgcattc accacctccg
      901 caagcacctg gccttcgagt tcaccgatgc ggggcatatc ctcggctcgg cctcggtgga
      961 cctccgcctg acagaaggcg cgggacaccg gttggttttc tccggcgaca tcggccgcag
     1021 cgccctgccg atcatccggg atcccgaccc accggccggg ccggtggaca cgctgatcat
     1081 cgagtccacc tacgccgatc ggagccatga gtcggttgcg gacgccgagg cgcggctggg
     1141 cgagctgatc cggcgggtgg cgggccgtgg cggaaagctg ctgatcccgg ccttcgcgct
     1201 gggccggacc caagaactga tctacggact gcaccagttg tttcgggccg ggaagatccc
     1261 cggcctgccg atcttcgtgg acagcccgct cgccgtggac acgacggcgg tcttccggtt
     1321 gcaccccgac ctgttcgacc gggatgagcg gatgatcgag cgcaccaccc ggctgttcga
     1381 ctttcccctg gtgcagtacg tccgcgacgt caacgattcc aagaagctca acagcatccc
     1441 ggggcccgcc gtcatcatcg ccgcgagtgg catggtcgag tcgggccgca tcctgcacca
     1501 cctggccaat cacggcggtg atcaccgctc ggtcatcctg ttcgtgggat tccaggcgga
     1561 gcacaccctc ggccggcgga tccaggaggg cgcgcggacg gcgaagatct tcggcgagga
     1621 ggttcagctc cgggccgagg tggaaaccat cgggggttat tcggctcacg ccgaccggga
     1681 cgagctgcgc gcctgggtgc
//
LOCUS       DATIFF010000363         1889 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_972482, whole genome shotgun sequence.
ACCESSION   DATIFF010000363 DATIFF010000000
VERSION     DATIFF010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1889)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1889)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1889
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_972482"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(142..345)
                     /locus_tag="VLD58_05450"
     CDS             complement(142..345)
                     /locus_tag="VLD58_05450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53777.1"
                     /translation="MPSPGPDESIGPGVVASSLGHGRWTHGAEDVVIDGQGVKGDRRR
                     GGGIHANAALRVDGRWGTPRSAT"
     gene            complement(375..635)
                     /locus_tag="VLD58_05455"
     CDS             complement(375..635)
                     /locus_tag="VLD58_05455"
                     /inference="COORDINATES: protein motif:HMM:NF013607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53778.1"
                     /translation="MTRRRVLFLCTHNAARSQKAEAVPRAWTGNRFEVASAGTEASRV
                     HSLAIQVMHRPPDRVASLIHVPRCAQPLLIRFPVRTSNRGPG"
     gene            complement(632..1750)
                     /gene="arsB"
                     /locus_tag="VLD58_05460"
     CDS             complement(632..1750)
                     /gene="arsB"
                     /locus_tag="VLD58_05460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001272375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008490 - arsenite secondary active
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACR3 family arsenite efflux transporter"
                     /protein_id="HSB53779.1"
                     /translation="MSVAAGMTIPRAASPLGTFERYLTAWVFLSIAAGIGLGQLLPAF
                     FTALGGLELARVNLPVALLVWLMIVPMLLKIDFGALAQVREHWRGMGVTLFVNWAVKP
                     FSMALLGWIFIRHVFAALLPADQIDSYIAGLILLSAAPCTAMVFVWSNLSDGDPNFTL
                     TQVALNDALMIVAFAPIVSLLLGLSAITVPWNTLLLSVVLYIVIPVILAQLWRGVLLR
                     RGGTAALARVLALLHPVSLAALLTTLVLLFGFQGARILAQPLVILLLAVPILIQVYFN
                     SGLAYLLNRLTGESHRVACPSALIGASNFFELAVATAISLFGLTSGATLATVVGVLVE
                     VPVMLSVCTFCNRTRHWFAAPASAPAAARPMVDRAVSP"
BASE COUNT          340 a          644 c          661 g          244 t
ORIGIN      
        1 ccgagggctt cgtaggcggc gacgaccgcc gggttctggt cacggaaccg cttgaacggc
       61 tgcggcagct cggccatcgg ctctcctctc aggctctcgc cacggcgacg gaggtgtcgt
      121 agaagccagc gctggcgccg gtcaggtcgc tgagcgtggt gttccccagc gcccgtccac
      181 ccggagcgcc gcgttcgcat ggatgccgcc gccgcggcgg cgatcgccct tgacgccctg
      241 accgtcgatc acgacgtctt cggcgccgtg ggtccagcgc ccgtgcccga gggaggacgc
      301 cacgacgccg gggccgatgc tctcgtcggg accgggagac ggcatggcga cctcctcgct
      361 ccggtggacc caggtcagcc cggaccgcga ttcgacgtac gcaccggaaa tcggatgagc
      421 aacggctgtg cacaccgcgg cacgtgaatc agcgacgcca cccggtcagg cggccggtgc
      481 atcacctgga tcgcgaggga atggacccga ctggcctccg tgccggcgct cgccacctcg
      541 aaccggttcc cggtccaggc tcgggggacc gcctcggcct tctggctccg cgccgcgttg
      601 tgggtgcaga gaaagagcac acggcgacgg gtcatgggct caccgcccgg tccaccatcg
      661 gccgggcagc cgcgggcgca cttgccggcg cagcgaacca gtgccgcgtc cggttgcaga
      721 aggtgcacac ggagagcatc accggtacct ccaccaggac gccgacgact gtcgccagcg
      781 tggcgcccga ggtgagcccg aacagcgaaa tcgccgtcgc gaccgccagc tcgaagaaat
      841 tgctggcgcc gatgagggcc gaagggcagg cgacccggtg ggactcgccg gtcagccggt
      901 tcaacaggta ggccagcccg ctgttgaagt agacctggat caggatcggc accgccagca
      961 gcaggatcac gagcggctgg gccaggatcc gggcgccctg gaagccgaac aagaggacca
     1021 gcgtcgtgag cagcgccgcg agcgacaccg gatgcagcag cgcgagcacc cgcgccagcg
     1081 ccgccgtccc gccccgccgg agcagcaccc ctcgccagag ctgcgccagg atcaccggaa
     1141 tcacgatgta gagcaccacc gagagcagca gcgtgttcca cggcaccgtg atggcggaga
     1201 ggccgaggag caggctcacg atcggcgcga aggcgacgat catgagggcg tcgttgagcg
     1261 ccacctgggt cagggtgaaa ttcgggtcgc cgtcgctcag gttgctccag acgaacacca
     1321 tggcggtgca gggcgcggcg gagaggagga tgagcccggc gatgtaggag tcgatctggt
     1381 cggccggcag gagcgccgcg aagacgtggc ggatgaagat ccaccccagc agcgccatcg
     1441 agaacggctt caccgcccag ttgacgaaca aggtgacgcc catcccccgc cagtgctccc
     1501 gcacctgggc cagcgcgccg aagtcgatct tgagcagcat gggcacgatc atgagccaga
     1561 ccagcagagc gacgggcagg ttcacccggg ccagctcgag cccgcccagc gcggtgaaga
     1621 atgccggcag cagctgcccc aggccgatgc cggccgcgat gctcaggaac acccacgcgg
     1681 tgagatagcg ctcgaaggtg ccgagcgggc tcgccgcgcg ggggatcgtc atgccggctg
     1741 ctacgctcat cgtggctctc cgcgaccgtg ctcgaagctg cccgacgccc aaagtatcaa
     1801 tgtctcttga tgcgtgcaac gtgaatctac tctgaaggtc cgctcacggg ggcgtcggag
     1861 cagcgccgcg ttgactaatc aagatggat
//
LOCUS       DATIFF010000364         2688 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_817759, whole genome shotgun sequence.
ACCESSION   DATIFF010000364 DATIFF010000000
VERSION     DATIFF010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2688
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_817759"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..518
                     /locus_tag="VLD58_05465"
     CDS             <1..518
                     /locus_tag="VLD58_05465"
                     /inference="COORDINATES: protein motif:HMM:NF014342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DHHA1 domain-containing protein"
                     /protein_id="HSB53780.1"
                     /translation="VAILTDTGAFRFSNTRPAVLRTAAALLETGVDPEQVYLDVYANA
                     PEGRARLLAETLQTLVVEPEYGLAWVTVPPGAMERLGTTPDDLDGIVEVPRSITGVRM
                     ALLFREIASGRVKVSLRSVGAVDVAAFSRPYGGGGHTKASGLSLEGSMAEAQATVLAA
                     ARHYLSGNGVG"
     gene            582..818
                     /locus_tag="VLD58_05470"
     CDS             582..818
                     /locus_tag="VLD58_05470"
                     /inference="COORDINATES: protein motif:HMM:NF013286.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HSB53781.1"
                     /translation="MAEDTLTRIEQTLDTLRPYIASHRGSVEVVDFDEADGRLLLRLG
                     GHCHGCSASTITLKQGIETRLRQLVPEVKLVESI"
     gene            821..1939
                     /locus_tag="VLD58_05475"
     CDS             821..1939
                     /locus_tag="VLD58_05475"
                     /inference="COORDINATES: protein motif:HMM:NF022077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HSB53782.1"
                     /translation="MPTPLAAQVAAALSRIQNPRLENDLMSAGMIRDLVVTDDGKVSF
                     TFLLGRDDPATLVREARGAVRAIDGVNPQELRISVVDPGGPAKGSHPPPGQTQASAGM
                     ATPAPQPADFPNLGKIIAVSSGKGGVGKSTVSANLAVALARRGKRVGLMDGDIYGPNI
                     PRMFGVFEKPPVVQGKIQPLVAWGVKLMSLGFLIDRDAPAIWRGPIIMKIVQQFLRDV
                     DWGELDYFIVDLPPGTGDAQLSLVQSCQVSTAVIVTTPQEVAVGDALRGAKMFEKVSV
                     PVAGIVENMGAWTDPQTGKKLEMFGSGGGKRLAEELKVPLFGTVPLQPGMAELADRGK
                     PIIAAEPESPAAKALDAIAEALIEAAGSRSVALPIMRG"
     gene            complement(2035..>2688)
                     /locus_tag="VLD58_05480"
     CDS             complement(2035..>2688)
                     /locus_tag="VLD58_05480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53783.1"
                     /translation="GMLGTLLFWLGPKQWGLENAGAAIGILIELISLGAPVALGRWLG
                     TALEAPREGKPGLISRFFIRWKAGMFFRLSGGSKPVSAPALPPAGQPTEMLLASQARE
                     LFRALSPAERNALGDVSGAIARLEQDGERLRGRLNQLAEAAGAVGPGDGPRRELTSRI
                     ADEERAAARQLAATVTALEELRLDLLRVKAGVADQGGLTRSLEQLRQLSAAVDGLLK"
BASE COUNT          425 a          918 c          925 g          420 t
ORIGIN      
        1 atgtcgcgat cctgaccgac accggcgctt tccggttcag caacacccgt ccggccgtac
       61 tccgcaccgc ggcggcgctg ctcgagaccg gagtcgatcc cgagcaggtt tacctcgacg
      121 tctacgccaa tgcgcccgaa ggccgggccc ggctcctggc ggaaaccctg cagacgctgg
      181 tggtcgagcc ggagtacggc ctcgcctggg tcaccgtgcc gccgggcgcg atggagcggc
      241 tggggaccac cccggacgat ctcgatggca tcgtggaggt gccccggagc atcaccgggg
      301 tgcggatggc gctcctgttc cgggagatcg cttccgggag ggtgaaggtg tcgcttcggt
      361 cggttggcgc ggtggatgtg gcggctttca gccggccgta cggcggcggg ggccacacca
      421 aggcgtcggg cctctcactc gagggcagca tggccgaggc ccaggccacg gtgctcgcgg
      481 cggcccggca ctatctgtcg gggaatgggg taggttgagg ggctggtctc acctcgagta
      541 agttcacggt gacggcacct ctggctacac ggatcggact gatggcagaa gacacgctta
      601 ctcgtatcga acagacgctc gacactctcc gcccctacat cgcgtcccac cggggcagcg
      661 tggaagtggt ggatttcgac gaggccgatg gacggctcct gctccgtctg ggcggtcact
      721 gtcatgggtg ttccgcgtcg acgatcacac tcaagcaggg gatcgaaacc cggctccggc
      781 agctggtgcc ggaggtgaaa ctggtggagt cgatctagcc atgcccactc cactggcggc
      841 ccaggtcgcg gcggcgcttt cccggattca gaatccccgg ctcgagaacg atctcatgtc
      901 ggcgggaatg atccgcgacc tcgtggtcac cgacgacgga aaggtctcgt tcaccttcct
      961 gctcggccgc gacgatccgg ccaccctggt gcgcgaagcg cgcggggcgg tgcgggccat
     1021 cgacggcgtg aacccgcagg agctccgcat cagcgtggtt gatccgggcg ggccggccaa
     1081 gggctcgcac ccgccgcctg gccagaccca ggcctccgcc ggaatggcca cgcctgcgcc
     1141 gcagccggcc gatttcccca atctcggcaa gatcatcgcg gtatcgtcgg ggaagggcgg
     1201 agtcggcaag tccaccgtgt ccgccaacct cgcggtggcg ctggcccggc gcgggaagcg
     1261 ggtggggctg atggacggcg acatctacgg ccccaacatc ccgcggatgt tcggcgtgtt
     1321 cgagaagccg ccggtggtgc aggggaagat ccagccgctc gtcgcctggg gcgtgaagct
     1381 catgtcgctg gggttcctga tcgaccggga tgcgccggcg atctggcggg gcccgatcat
     1441 catgaagatc gtgcagcagt tcctgcgcga tgtcgactgg ggcgagctcg actacttcat
     1501 cgtcgacctt ccgcccggca ccggtgatgc ccagctctcg ctggtgcaat cgtgccaggt
     1561 gtcgaccgcg gtgatcgtca cgaccccgca ggaggtcgcg gtgggtgacg cgctccgcgg
     1621 cgcgaagatg ttcgagaagg tgagtgtgcc ggtcgcgggc atcgtggaga acatgggcgc
     1681 ctggaccgat ccccagaccg gcaagaagct ggagatgttc ggctcgggtg gcgggaagcg
     1741 cctcgccgaa gagctcaagg tgccgctctt cggcaccgtg ccgctccagc cggggatggc
     1801 ggagctggcc gaccggggca agccgatcat cgccgccgag cccgagagcc ccgccgcgaa
     1861 ggcgctcgac gccatcgccg aggcgctgat cgaggcggcg gggagccgct cggtcgccct
     1921 gccgattatg cgggggtagg aagtgagaag tgagaagtga gaagtgagaa gggagaagta
     1981 agaaggcaga ggtcaacgcc gacttctccc ttctcccttc tcccttctcc cttctcactt
     2041 caacagccca tccaccgccg cactcagctg ccgcagctgc tccagcgacc gcgtgagtcc
     2101 gccctggtcc gccacgccgg ctttcacccg cagcagatcc agccgcaatt cttcgagtgc
     2161 cgtgaccgtc gccgccagct ggcgggccgc ggcgcgctct tcgtcggcga ttcggctggt
     2221 gagctcacgc cgaggaccat cccccggacc aaccgccccc gccgcctcgg ccagctgatt
     2281 caaccggccg cggaggcgct ccccatcctg ctccagccgg gctatcgcgc cactcacatc
     2341 tcccagggca ttccgctccg ccggtgacag cgcccggaag agttcccgcg cctgactcgc
     2401 gagcagcatc tcggtcggct ggccggcggg aggaagtgcc ggcgcggaaa ccggcttgct
     2461 gcctccgctc aggcggaaga acatccctgc cttccagcgg atgaagaacc ggctgatgag
     2521 tcccggcttg ccctcgcgcg gggcctccag ggccgtcccc agccagcgcc ccagtgccac
     2581 cggcgcaccg agggagatca gctcgatcag gatgccgatg gcggcacccg cattctcgag
     2641 gccccactgc ttgggcccca gccagaagag caacgtcccc agcatgcc
//
LOCUS       DATIFF010000365         1099 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1433772, whole genome shotgun sequence.
ACCESSION   DATIFF010000365 DATIFF010000000
VERSION     DATIFF010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1433772"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..807
                     /locus_tag="VLD58_05485"
     CDS             <1..807
                     /locus_tag="VLD58_05485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53784.1"
                     /translation="FYPRRGFGQISEAYGEAAVAAGAELRLGARVTRLAPRQGAPGWV
                     VGTEGANGEASLEADYLWSTIPITTLARAMPDTPPPVLAAADQIRYRAMLLVYLVLDV
                     ERFTEYDAHYFPDPKITITRLSEPKNYSVATEPRGRTILCAELPCDADDTTWRLDDAA
                     LGRLVADDLARAGIPLARPPVGVAVRRLRQAYPIYLNGYEQPLGVLDDWSLRLTRVLS
                     YGRQGLFAHDNTHHALFMAYAAAECLGATGFDEQRWASYREVFKTHVVED"
     gene            809..>1099
                     /locus_tag="VLD58_05490"
     CDS             809..>1099
                     /locus_tag="VLD58_05490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53785.1"
                     /translation="MPRTAIRLRLFLTCWIVFVLHYATDFVREHYLVVSIVEDHSYAL
                     DKYYGLHVDIFKNPPEAKVQGAHHGANPGMSMVAAIPYALFRPAVDFIVSREL"
BASE COUNT          165 a          383 c          371 g          180 t
ORIGIN      
        1 ttctacccgc ggagggggtt cggccagatt agtgaggcct acggcgaggc ggcggtcgcg
       61 gcgggcgcgg agctgcgcct gggggcgcgg gtcacccggc tcgcaccccg gcagggcgca
      121 ccgggctggg tggtcgggac cgagggggcc aacggcgagg cttcgctcga ggcggactac
      181 ctctggtcca ccatccccat caccaccctg gcgcgcgcga tgccggacac gccgccaccg
      241 gtgctggcgg cggccgatca gatccgctac cgggcgatgc tgctggtcta cctggtgctc
      301 gacgtcgagc ggttcaccga gtacgacgcg cactacttcc ccgatcccaa gatcaccatc
      361 acccgcctct ccgagccgaa gaactattcg gtggcgacgg agccgcgggg ccggacgata
      421 ctctgcgccg agcttccctg cgatgcggac gataccacct ggcggctcga cgacgcggcg
      481 ctgggccggt tggtcgccga cgacctcgcc agggcgggca tcccgctggc gcggccgccg
      541 gtcggcgtcg cggtccgccg gttgcggcag gcgtacccga tctacctgaa cggctacgag
      601 cagccgctcg gggtgctgga tgactggtcc ctccggctga cccgggtgct gagctacgga
      661 cgacagggac tgttcgcgca cgacaacacc caccatgcac tgttcatggc gtacgccgct
      721 gccgaatgtc tcggggcgac cggattcgac gagcagcgat gggcgtcgta ccgcgaggtt
      781 ttcaagactc acgtcgtcga ggactgacat gccccgcacc gccatccgtc tccggctctt
      841 cctgacctgc tggatcgtct tcgtgctgca ctacgccacc gatttcgtgc gcgagcacta
      901 tctcgtggtg agcatcgtcg aggaccactc ctacgcgctc gacaagtact atgggctgca
      961 cgtcgacatt ttcaagaatc cgcccgaggc caaggtccag ggcgcgcacc acggcgccaa
     1021 tccgggcatg tcgatggtgg ccgcgatccc ctacgccctg ttccgtccgg cggtggactt
     1081 catcgtgagc cgggagctg
//
LOCUS       DATIFF010000366         1118 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1280285, whole genome shotgun sequence.
ACCESSION   DATIFF010000366 DATIFF010000000
VERSION     DATIFF010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1280285"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..435
                     /locus_tag="VLD58_05495"
     CDS             <1..435
                     /locus_tag="VLD58_05495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53786.1"
                     /translation="ASPKFGGQTHNGWWFWSPTGEKRYLFIGEEGPGSIGASSSGDIH
                     VVDVSDFANPVEVASYNLPGAGTHNFWVDETRQILYAAYYNGGVVALDISGTLSGNLG
                     SREIATIKPGGAGNTYVWGVMLYNGSLYASDMLTGLWQLTVP"
     gene            509..>1118
                     /locus_tag="VLD58_05500"
     CDS             509..>1118
                     /locus_tag="VLD58_05500"
                     /inference="COORDINATES: protein motif:HMM:NF014301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PA domain-containing protein"
                     /protein_id="HSB53787.1"
                     /translation="MTYRFRPAAGLLFVGLLSCARILAAQTGFSAATASRQRTLEQLL
                     VTLGDTARARQHSRILSAVPHVAGTPAQQATARYVLEQMRSFGLDTSRADFQVFIPHP
                     DSTVVEIVWPTPTRLALEEPALPEDSASQRSIWPVMNGHAAAGDVTAPLVYVNYGLIE
                     DYRVLDSLGVSVRGKIAIARYGRSFRGIKAREAEAHGALALLI"
BASE COUNT          169 a          399 c          355 g          195 t
ORIGIN      
        1 gcgtctccca agttcggtgg ccagacccac aacgggtggt ggttctggag cccgaccggc
       61 gagaagcgct acctcttcat cggcgaggaa ggccccggtt cgatcggtgc ctcctcgtcg
      121 ggtgacatcc acgtggtgga cgtctccgac ttcgccaacc cggtcgaggt ggcgtcctac
      181 aatctgcccg gcgccgggac ccacaacttc tgggtcgacg aaacccgcca gatcctctat
      241 gccgcctact acaacggcgg ggtggtggcc ctggatatct ccggcaccct gagcggcaat
      301 ctcggctccc gcgagatagc gaccatcaag cccggcggcg cggggaacac ctatgtctgg
      361 ggcgtgatgc tctataacgg gtcgctgtac gccagcgaca tgctcaccgg cctctggcag
      421 ctcacggtgc cttgaccgga aggccgcgtc actgcaccat cctcgggacg gcgcaccccg
      481 cgccgtcccg tcctttcaaa ggtccctgat gacataccgg ttccggccgg ccgccggact
      541 cctcttcgtc ggcctcctga gctgtgcccg gattctggct gcccagaccg gtttttccgc
      601 cgccaccgcc tcacgccagc gcactctcga gcagctgctt gtcaccctgg gcgataccgc
      661 ccgggcccgg cagcacagcc ggatcctctc ggcggtgccg catgtggccg ggacgccggc
      721 ccagcaggcc actgcgcgct acgtgctgga gcagatgcgg agcttcggcc tcgacaccag
      781 ccgtgccgac ttccaggtct tcatcccgca cccggactcg acggtggtgg agatcgtctg
      841 gcccacgccg acccggctgg cgctggagga accggcgctg ccggaggatt ccgcctcaca
      901 acggtcgatc tggccggtga tgaacggcca cgcggccgcc ggcgatgtga cggctccatt
      961 ggtctacgtc aattacggct tgatcgagga ctaccgggta ctcgattccc tcggtgtttc
     1021 ggtccgcggc aagatcgcga tcgcgcgcta tggcaggagc ttccgcggca tcaaggcgcg
     1081 ggaggctgag gcgcacggcg cgctggcact cctcatct
//
LOCUS       DATIFF010000367         1749 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_817988, whole genome shotgun sequence.
ACCESSION   DATIFF010000367 DATIFF010000000
VERSION     DATIFF010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1749)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1749)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1749
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_817988"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1306)
                     /locus_tag="VLD58_05505"
     CDS             complement(<1..1306)
                     /locus_tag="VLD58_05505"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HSB53788.1"
                     /translation="MPTPDPLLADLDHDQTRESGARFLDLIARYLDQTSRGDGPVGTT
                     RTPEELEARFREAMPQTGHPLDEVLGRIEREIVPDVTRLTHPMYMGHQVSAPLPASIW
                     VEALISAFNNSTAVQEMAPPVTIIEHQLVRWMGELVGWPEGCGGTLTSGGTEATFTAL
                     LAARAAVMPDAWEDGVGANPPVVVYGEQSHYAVARAIGQLGLGLRNGIAVPTRDFRID
                     TAVLVETLDRLEREGRRVMAVVATAGSTPTGSFDDLEAIGRLCETRDIWFHVDGAHGA
                     TALFSERHRHRVWGIHRARSLAWDPHKTMLLPLSAGMVLLRHEAELEQAFLQRAPYLF
                     HRGENAKVWDLGPKSFQCSRRGDALKVWLVLQRYGARMIGELYDRLCATSERLHGLIG
                     ERATFQAMHRPEGNILCFRYLADGHRNDEELDRINFELRQRYN"
     gene            1377..1748
                     /locus_tag="VLD58_05510"
     CDS             1377..1748
                     /locus_tag="VLD58_05510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53789.1"
                     /translation="MALKLSAKQQTQLAFLEHLPTKFARFHSVIEQLAAPKVDEALTR
                     GLVRQLDEMKAGASQLGMNGLADAASQMASTARRGGGQMVKIRGLRDGLGVLKMNYEG
                     ALKKASVPHPESEDEQGEAKE"
BASE COUNT          298 a          562 c          635 g          254 t
ORIGIN      
        1 gattgtagcg ctggcgcaac tcgaagttga tccggtcgag ctcctcgtcg ttccggtgcc
       61 cgtcggccag atagcggaag cagagaatgt tgccctcggg ccggtgcatc gcctggaagg
      121 tggcgcgctc accgatcagc ccgtgcagcc gctcggaagt ggcacagagc cggtcgtaca
      181 gctcgccgat catccgggcc ccgtaccgct ggagcaccag ccacaccttg agcgcgtcac
      241 cccggcggga gcactggaag ctcttcggac cgagatccca gaccttggcg ttctcgcccc
      301 ggtggaacag gtacggcgcc cgctgcagga acgcctgctc cagctcggcc tcgtgcctga
      361 gcagcaccat gccggcggag agggggagca gcatggtctt gtgcgggtcc caggccaggg
      421 accgggcccg gtgaatgccc cagacccgat gacggtggcg ctcggagaag agggccgtgg
      481 cgccgtgggc cccgtcgaca tgaaaccaga tgtcccgggt ttcgcagaga cgtccgatgg
      541 cttcgagatc atcgaagctg ccggtcgggg tggaaccggc agtagccacc acggccatca
      601 cccgccggcc ttcgcgctcg agccgatcga gtgtctccac cagcacggcc gtgtcgatcc
      661 ggaagtcgcg ggtcggcacc gcgatcccgt tccggagtcc gaggccgagc tggccgatgg
      721 cgcgcgcgac ggcgtagtgg ctctgctcgc cgtacaccac caccgggggg ttggcgccga
      781 ctccgtcctc ccatgcatcg ggcatcaccg cggcgcgcgc cgccaggagt gcggtgaacg
      841 tcgcctcggt gcctcccgag gtgagcgtgc cgccacaccc ctcgggccag cccaccagct
      901 cacccatcca gcggaccagc tgatgttcga tgatggtgac cggcggcgcc atctcctgca
      961 ccgcggtcga gttgttgaag gcgctgatca gcgcctcgac ccagatggac gcgggcagcg
     1021 gggcggagac ctggtggccc atgtacatcg ggtgggtgag ccgggtgaca tcggggacga
     1081 tctcgcgctc gatccggccc aggacctcgt cgagtggatg gccggtctgc ggcatggcct
     1141 cgcggaaacg ggcctccagt tcctccggcg tgcgggtggt gccaaccggc ccgtcaccgc
     1201 ggctggtctg gtcgaggtac cgcgcgatga ggtcgaggaa gcgggcaccc gattcacggg
     1261 tctggtcgtg gtcgaggtcg gcgaggagcg gatcgggtgt cggcataccg gtggcgcgaa
     1321 tgaggagggg gtaagatagc ggagcacgaa ccggggcgac ccgttaggtt gacaccatgg
     1381 ccctcaaact cagtgccaag cagcagaccc agctcgcttt cctcgagcac cttccgacga
     1441 agttcgcgcg ctttcacagc gtcatcgaac agctggccgc gcccaaggtg gacgaggcgc
     1501 tgacgcgggg gctggtgcga cagctggacg agatgaaggc gggcgcctcg cagctcggga
     1561 tgaacgggct ggccgacgcg gccagccaga tggcctcgac agcccggcgc ggcggggggc
     1621 agatggtgaa gatccggggc ctcagagacg ggctgggcgt gctcaagatg aattacgaag
     1681 gcgcgctcaa gaaggcgtcg gtgccgcacc ccgaaagcga agacgagcag ggggaggcaa
     1741 aagaatagg
//
LOCUS       DATIFF010000368         2820 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_356917, whole genome shotgun sequence.
ACCESSION   DATIFF010000368 DATIFF010000000
VERSION     DATIFF010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2820
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_356917"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2820)
                     /locus_tag="VLD58_05515"
     CDS             complement(<1..>2820)
                     /locus_tag="VLD58_05515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53790.1"
                     /translation="VPGDPRVYYAGAASGGIFKSTDGGIHWEPIFDDQPVSSIGALAV
                     APSDPNVVWAGTGESFIRSHISVGWGVYKSTDAGKSWTRMGLENTGRIARIAIDPRNP
                     EVVLVAALGHAYGPQPERGIYRTVDGGKTWEKTLFVNDSTGAIDVLMDANNPRIVFAA
                     TWQIEIHTWGRESGGAGSGIWKSTDGGVTWKRLSGHGLPETPVGKIGLGLARSNSNRV
                     YALIETGDGVPVHGKDAGTGELWRSDDGGDSWQMVSKDRQLGGRTQYYNRMAVAPDNE
                     NEAYFLAANYSKTLDGGKTTIDPPFSEYPGGDHHDMWIDPLDANRQVVGHDGGISISV
                     NRGKSWNQIQPPVAQMYHVTVDDRVPYYVYGNRQDGPSAMGPSNTKLGSFDGSIPRSF
                     FHSVGGGESGFATPDPADSNIVWSSASGWGAAGGVVTRYDVRTGNYQNVEVWPAATMG
                     WPAADLKYRFVWNFPLAISPHDHNRVYVGSQMVHMTTDGGRSWKEISPDLTRNDKSRQ
                     QISGGLTPDNIGVEYAGVVMSIAESRLKPGLIWAGTNDGLVQVTRDGGGTWTNVTANL
                     PGLPVWGTIANVEPSRFDTGTAYLTVDGHQVNNRDPWVYKTTDYGKTWKLITNGLAKT
                     PLSYAHIVREDPVRRGLLYLGTEGGLYVSFDDGENWQPLQNNLPHAPVYWIVVQERFS
                     DLVVATYGRGIWILDDISPLRELAAAVTSKEAHLFTPRVAWRLRGVEPPFAVAHDPSA
                     GSNPPTGASLSYWLKTDSKDSVSITISDGGGTVIRTMQGPAKAGVNRVWWDLRHENTK
                     EARLRTAPLYAPELAPGPDGRTAPDGYRLNMLAPPGTYTVRLKAAGQDLSQKLELRKD
                     PNSGGSEAEILAQTALLKEIAGQLDSVVTMINTIESVRGQLVGLKNTLAGDSTRKDLV
                     AGADSLDKKLTGVEGELTQLLETGRG"
BASE COUNT          381 a          959 c          969 g          511 t
ORIGIN      
        1 tccccggccg gtctcgagga gctgggtcag ctccccctcg acaccggtga gcttcttgtc
       61 cagggaatcg gccccggcga caaggtcctt gcgcgtcgag tctccggcga gcgtgttctt
      121 cagcccgacg agctggccgc gcaccgactc gatggtattg atcatcgtca cgacgctgtc
      181 gagctgcccc gcgatctcct tgagcagcgc cgtctgcgcc aggatctccg cctcgctccc
      241 tcccgaattg ggatcctttc gcagctcgag cttctgggag aggtcctggc ccgccgcctt
      301 gagcctgacc gtgtatgtcc ccggcggcgc gagcatgttg agccgatagc cgtccggcgc
      361 ggtacggccg tcggggccgg gcgccaactc cggggcgtac agcggcgcgg tgcggagcct
      421 ggcttccttc gtattctcgt ggcgcaggtc ccaccagacc cgattgactc cggccttcgc
      481 cggtccctgc atcgtccgga tgaccgtccc gccgccatcg gagatggtga tcgacacgct
      541 gtccttcgag tcggtcttga gccagtagct gagcgaagcg ccggtcggcg gattcgagcc
      601 ggcggagggg tcgtgggcca cggcgaaagg cggctcgacg ccgcgaaggc gccaggccac
      661 ccgcggggtg aagaggtgcg cttccttcga cgtcacggcg gcggcgagct cccggagcgg
      721 ggagatatcg tccaggatcc agatcccccg gccgtaggtg gccacgacca gatcgctgaa
      781 gcgctcctgc accacgatcc agtacaccgg ggcatggggc aggttgttct gcagcggctg
      841 ccagttctcg ccgtcgtcga aggagacgta gagccctcct tcggtgccca ggtagaggag
      901 gccgcgccgg accgggtctt cccgcacgat gtgcgcgtag ctgagcgggg tcttcgccag
      961 cccgttggtg atgagcttcc aggtcttgcc gtagtcggtg gtcttgtaca cccaggggtc
     1021 gcggttgttc acctgatggc cgtccaccgt caggtaggcg gttccggtgt cgaaccggga
     1081 gggctcgacg ttggcgatgg tgccccacac cgggagtccg ggcagattgg cggtcacgtt
     1141 ggtccaggtc ccgccgccgt cccgggtcac ctgcaccagc ccatcgttgg tgccggccca
     1201 gatgaggccg ggcttgagcc gcgactccgc gatcgacatg accacgccgg catactccac
     1261 gccgatgttg tcgggcgtga ggccgccaga gatctgctgc cggctcttgt cgttccgcgt
     1321 gaggtcgggg ctgatctcct tccagctccg gccgccgtcg gtggtcatgt ggaccatctg
     1381 gctcccgacg tacacccggt tgtggtcgtg cggcgagatg gcgagcggga agttccagac
     1441 gaaccggtac ttgagatccg ccgccggcca ccccatcgtc gccgccggcc agacctcgac
     1501 gttctggtag ttgccggtgc gcacgtcata gcgagtcacg accccgcccg cggcgcccca
     1561 cccgctcgcg ctcgaccaga cgatgttgga gtcggcgggg tcgggcgtgg cgaacccgct
     1621 ctcgccgccg cctaccgaat ggaagaagct gcgggggatc gagccatcga acgagccgag
     1681 cttggtgttg ctcgggccca tcgcggaggg gccgtcctgg cggttgccgt acacgtagta
     1741 gggcacccgg tcgtccacgg tgacgtggta catctgggcc accggcggct ggatctggtt
     1801 ccaggacttc ccccggttga ccgagatcga gatcccgccg tcgtggccga cgacctggcg
     1861 gttggcatcg agcggatcga tccacatgtc gtggtggtcg cccccggggt actcggagaa
     1921 cggcggatcg atggtggttt tgccgccgtc cagggtcttg ctgtagttcg cggcgaggaa
     1981 gtacgcctcg ttctcgttgt cgggcgccac cgccatgcgg ttgtagtact gggtcctgcc
     2041 gccgagctgg cggtccttgc tcaccatctg ccaggagtca cccccgtcat cggagcgcca
     2101 cagctcgccg gtgccggcgt ccttgccgtg gaccgggacg ccgtccccgg tttcgatcag
     2161 ggcgtagacc cggttggaat tggagcgggc gaggccgagg ccgatcttgc cgaccggcgt
     2221 ctcgggcagg ccgtgtccgc tcaggcgctt ccaggtgacg ccgccgtcgg tggacttcca
     2281 gatgccgctc ccggcgcccc cgctttcccg gccccacgtg tggatctcga tctgccaggt
     2341 cgccgcgaag acgatccgcg ggttgttggc gtccatcagc acgtcgatgg cgccggtgct
     2401 gtcgttgacg aagagcgtct tctcccaggt cttcccgcca tccaccgtgc gatagatccc
     2461 ccgctcgggc tggggcccgt aggcgtgccc gagggcggcg acgaggacca cttcggggtt
     2521 ccgcggatcg atcgcgatcc gcgcgatccg ccctgtgttc tcgagcccca tccgggtcca
     2581 gctctttccc gcgtcggtgg acttgtacac gccccagccg accgagatgt ggctccggat
     2641 gaatgactcg ccggtgccgg cccacacgac gttcggatcc gatggagcga ccgccagcgc
     2701 gccgatcgag ctcaccggct ggtcgtcgaa gatcggctcc cagtggatcc ccccgtcggt
     2761 gctcttgaag atcccgcccg aggcggcgcc ggcgtaatag accctgggat cgccgggcac
//
LOCUS       DATIFF010000369         1090 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1127260, whole genome shotgun sequence.
ACCESSION   DATIFF010000369 DATIFF010000000
VERSION     DATIFF010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1127260"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(113..436)
                     /locus_tag="VLD58_05520"
     CDS             complement(113..436)
                     /locus_tag="VLD58_05520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53791.1"
                     /translation="MSLLWQDIRYALRQFHRAPGLSLAVVATLAIGIAGNATVFSVVS
                     GLLFRPFPFAHPERVISRYTSDFSSGPYGTSSYPGYRDLAARLTSLEGLAALKARPSA
                     RVGAG"
     gene            complement(507..>1090)
                     /locus_tag="VLD58_05525"
     CDS             complement(507..>1090)
                     /locus_tag="VLD58_05525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB53792.1"
                     /translation="AGPSGCGKTTLLSLLGLLDTPTGGEYWLDGKPVAQLSPSERARI
                     RNREIGFIFQAFNLIGDLTVYENVELPLTYRGMPAADRKQRVLAALEKVGMSHRVKHY
                     PSQLSGGQQQRVAVARAVAGEPLILLADEPTGNLDSTNGEAVMELLQALHRAGATICM
                     VTHDPRYAAHADRAIHLFDGRVVEDKVAEPTGM"
BASE COUNT          173 a          374 c          377 g          166 t
ORIGIN      
        1 tcttgcgcag cgcccgcgcc gcataccgca ggtccttggg cagagtcgtc acggatcctc
       61 cttatcggcc ttcgtcagtc gccaatcgtc gatcagcaag cggagcgacg actcacccgg
      121 cgcccacccg ggcactgggg cgcgccttca gggcggccag cccttccagg ctcgtgagcc
      181 gcgccgccag atcgcggtaa ccggggtagg aagaggtccc gtaggggcca ctgctgaagt
      241 cgctggtgta gcgcgagatc acccgctcgg gatgggcaaa cggaaacggc cggaaaagca
      301 ggccgctgac gacgctgaac accgtcgcgt tgcccgcgat cccgatcgcg agcgtggcga
      361 ctactgccag ggagagcccg ggggcccggt ggaattggcg cagcgcgtag cggatgtcct
      421 gccagagcaa gctcatcgcc gtccctcccg ccagatgcag gccgtcgctt cgccgtgatc
      481 tgttgcccgc cccgccgggc ggacaatcac atgcccgtag gttccgccac cttgtcttcc
      541 accacccggc cgtcgaacag atggatggcc cggtcggcgt gcgcggcata gcgcggatcg
      601 tgggtcacca tgcagatggt ggcgccggcc cggtgcaggg cctgcagcag ctccatcacc
      661 gcctcgccgt tggtggaatc gaggttaccg gtcggctcgt ccgccaggag gatcagcggc
      721 tcgcccgcga cggcccgggc cacggccacg cgctgctgtt ggccgccgga gagctgcgag
      781 ggatagtgct tgacccggtg ggacatgccg accttctcga gagccgcgag gacccgctgc
      841 ttgcggtccg ccgccggcat gccacggtag gtgagcggca gctccacgtt ctcgtagacc
      901 gtgaggtcac cgatcaggtt gaaggcctgg aagatgaagc cgatctcgcg attgcggatc
      961 cgggcccgtt ccgacggcga cagctgcgcc accggtttgc catccagcca gtattcgccc
     1021 ccggtggggg tatccagcag accgagcagc gagagcagcg tggtcttgcc gcacccggac
     1081 gggccggcga
//
LOCUS       DATIFF010000370         5434 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2050216, whole genome shotgun sequence.
ACCESSION   DATIFF010000370 DATIFF010000000
VERSION     DATIFF010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5434)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5434)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5434
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2050216"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..402
                     /locus_tag="VLD58_05530"
     CDS             <1..402
                     /locus_tag="VLD58_05530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53793.1"
                     /translation="IGGGGSFGIVLIDAANTTILGNTISTGNGGSGGASGSGGPGGIG
                     GDGGPQQTFCTGQIGGGGSGGKGGTGGAGGAGGGGGGGPSIGIVEVGTSTSTRTRNAI
                     VLGNAGAGGISVYEGSHDGTDGIKEEYYSVP"
     gene            complement(466..1773)
                     /locus_tag="VLD58_05535"
     CDS             complement(466..1773)
                     /locus_tag="VLD58_05535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53794.1"
                     /translation="MISLRRIHTRRKLGVCLLIGMAAISPSPARAQADTSGAAQAMRD
                     YLAAARHEGGKLWGRSLLGPMILVDPATRAAFASEEPPGGSFRQRDGLWQGTLPDGIP
                     LANFALTWVNRRWAMVLLPLPQDRFLALELLLHESYHGIQEQIGLARPDRLNPHLDER
                     DGRYWLRLELRALGTALGARGGDRKRAAEDAMRFRAARLARYPGADTLENSLEVAEGL
                     AEYTGTRVALDYLRLPQARAATLAHDFERRKTYVRSLGYGTGPGIGLLLDQYRPDWRT
                     RVAREGLAPQLAKALGVAGGDDAARVAIRYGADSLGTEEDRRAEARTRVLADYRARLI
                     DGPVLALHQSGVQRAFNPNELIPFGAEGTIYPTGTFSAEWGSLEVTRGGALIAPDYSL
                     LRLQAPTSPGDSVVHGEGWVLKLAEGWRAVPGARAGDLTVRKQ"
     gene            complement(1794..3044)
                     /locus_tag="VLD58_05540"
     CDS             complement(1794..3044)
                     /locus_tag="VLD58_05540"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HSB53795.1"
                     /translation="MIDLSASATVASRWLAHSLWQGAVVMLVYLVVGRIARRDGAETE
                     CRSATVGMMLISILPFLTAGAAWLAGGVAAELQASPVDALTRAEIPGKVLRLMQQQLT
                     FDVAQWVVGVWLAGAVLSLAYLLASLWWLNRRIMTESRAVELPGLRRLASRVGLEGAP
                     AVRAWSGAKSPFVTGWLRPIMVVPVGLHRLLGESEAESVLLHELAHVARKDVARNLLL
                     RVLGALAWYQLPFWVLLRDLNRARERACDDLAVRAMGRGLPLARALVLLEEQRAARPR
                     LAMAGTGGDFSSRVRRILASSATAGPARHRVGSAVILAVLLFANGGTLLLAASAEGSL
                     RRWAGSVHALISANDPAGPFTVELMGSRLVGATIDGRVLPAERIVQQGSQVALLNADG
                     RPELTLRVEAPGAIHWTPRAPRSP"
     gene            complement(3041..3430)
                     /locus_tag="VLD58_05545"
     CDS             complement(3041..3430)
                     /locus_tag="VLD58_05545"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HSB53796.1"
                     /translation="MPQTTASPTPAELQLLRVLWSRGPSTVREVHEALYAGTDTAYTT
                     TLKLMQNLHAKHLVKRDDAQRQHVYVAVAKEGDTLQGVVRGLIDRAFEGSAAALAMHA
                     LEAKPASAQELADLKELIRRLERQGGK"
     gene            3638..4483
                     /locus_tag="VLD58_05550"
     CDS             3638..4483
                     /locus_tag="VLD58_05550"
                     /inference="COORDINATES: protein motif:HMM:NF016816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M55 family metallopeptidase"
                     /protein_id="HSB53797.1"
                     /translation="MRVYLSIDMEGIAGVVHEDQTNPVDPRCAGEYARFRRLMTFEAN
                     AAVEGALAGGATRVLVNDSHWTMRNLLAEELHPGAELLSGGPKTWSMMEGIEAGWDLA
                     AFIGYHAKAGTSNAILDHTYTDAISDVRLNGASVGELGINAALAGTFGVPVSLVTGDK
                     ALGLEARALLGDRVQTIAVKEAVSRSAARHLSPETARALIRDSMREVVEDTRRNGVAR
                     AKRFVLPSPVTLEVDFAQTVHADQAAMAPGIARLGPRTVTARSDDFRELFLAFRTIFN
                     LAGAD"
     gene            4701..>5434
                     /locus_tag="VLD58_05555"
     CDS             4701..>5434
                     /locus_tag="VLD58_05555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53798.1"
                     /translation="MLIASALALLTLVSSDTGKKKLDSLPLATTRTIEYETSEGTWLS
                     LDVSPDGRTIVFELMGDLYTLPIGGGRAAPLTHGPAFDSQPRWSPDGKQIAFLSDRDG
                     GENIWLITADGTRTTEVSKGDNSLFASPEWTPDGNYIVASKTNAPLGSSYALWLFHKD
                     GGPGLNLTKDDKGTGALGQGRGTNINSLGAAFGKDGRYIWYARKRGGFGYNIDLTQWQ
                     LAIFDRETGRIFPQTDIYGSAMRPVLS"
BASE COUNT          918 a         1912 c         1788 g          816 t
ORIGIN      
        1 atcggcggcg gcggctcctt cgggatcgtc ctgatcgacg cggccaacac caccattctg
       61 ggcaatacca tcagcaccgg gaatggcggc agcggtggcg ccagcgggag cggtggcccg
      121 ggcggcatcg gtggcgacgg cggacctcag cagaccttct gcaccggaca gatcggtggc
      181 ggcggtagcg gcggcaaggg tggcaccggc ggcgccggcg gcgccggcgg cggcggaggc
      241 ggcggcccgt ccatcggcat cgtcgaggtc ggcaccagca ccagcacccg gacccgcaat
      301 gccatcgtgc tgggcaatgc aggcgcgggt ggcatcagtg tgtatgaagg cagccacgac
      361 ggcacggacg gcatcaagga ggagtactac agcgtgccgt aaggcaggcg ggaggcgggc
      421 gcgggaggcg ggagagacga tctcccgcct cctgccgctt tctgactatt gcttcctcac
      481 cgtcaggtcg cccgcccggg ctcccggcac cgctctccac ccctcggcaa gcttgaggac
      541 ccatccctcg ccgtgcacca ccgagtcacc gggcgaagtg ggcgcctgga gccgaagcag
      601 cgaatagtcc ggcgcaatca gcgcccctcc ccgcgtcacc tcgagcgatc cccattccgc
      661 gctgaaggtc cccgtgggat agatcgtccc ctcggcgccg aagggaatga gctcgttggg
      721 attgaaggcg cgctgcacac ccgactggtg caacgccagc accgggccgt cgatgagcct
      781 ggctcgatag tcggccagca cccgggtccg cgcctcggct ctccgatcct cttccgtgcc
      841 gagtgaatca gccccatacc ggatcgccac cctggcagcg tcgtccccgc cggcaacgcc
      901 gagcgccttg gcgagttgcg gcgccagccc ttcacgcgcc acccgggtgc gccagtccgg
      961 gcggtactga tccagcagca ggccgatccc tggcccggtc ccgtacccaa gcgagcggac
     1021 ataggtcttt cgtctctcga agtcgtgcgc cagcgttgcg gcccgcgcct gggggagacg
     1081 caggtagtcg agcgccacac gggtgccggt gtactccgcg agtccctccg ccacctcgag
     1141 cgaattctcc agcgtgtcgg cccccggata acgggccagc cgggcggcgc ggaagcgcat
     1201 cgcatcctct gccgcgcgct tgcggtcgcc accgcgcgcg cccagcgccg tgccgagggc
     1261 acgcagttcg agccggagcc agtagcggcc gtcgcgctcg tcgaggtgcg gattcagtcg
     1321 atcgggccgc gccagcccga tctgctcctg gatgccatga taggactcgt ggagcagcag
     1381 ctcgagggcc aggaaacggt cctgcggcaa cgggagcagc accatggccc agcggcgatt
     1441 cacccaggtg agcgcgaaat tggcgagcgg gatgccgtcg gggagcgtcc cctgccagag
     1501 accatcgcgc tgccggaagc ttccgccggg cggttcctcc gacgcaaagg ccgcgcgggt
     1561 cgccgggtcg accaggatca tcggcccgag gagagaacgc ccccacagct tgccgccctc
     1621 gtgacgagcc gcggccaggt agtcgcgcat ggcctgcgcc gcgccgctgg tgtcggcctg
     1681 cgcgcgtgcc ggggatggag aaatggcggc catgccaatc agcaggcaga cgccgagctt
     1741 gcgccgcgta tgtatccgcc gcagcgagat catggtgctt ccgtggtgta gggtcaggga
     1801 cttcggggag cccgcggagt ccagtgaatg gcgccgggcg cttccacccg gagcgtgagc
     1861 tcgggccggc catcggcgtt gagaagagcg acctggctcc cttgctgcac aatccgctcc
     1921 gccggcagca cgcggccatc gatggtggcc ccaaccaggc ggctccccat caattcgacc
     1981 gtgaagggac cggcggggtc gttggccgag atgagcgcgt gcacgctgcc ggcccagcgg
     2041 cgaagggagc cttcggccga ggccgcaagg aggagggtgc cgccgttcgc gaacaacagc
     2101 accgcgagga tcacggccga gccgactcgg tgcctggcag gcccggccgt ggcgctcgaa
     2161 gcgaggatgc ggcgcacccg cgaactgaaa tcgccgccag tgccggccat cgcgagacgg
     2221 ggccgggccg cccgctgttc ctcgagcagt accagcgcgc gggcgagagg aagtccccgt
     2281 cccatggcgc ggaccgcgag atcatcgcag gcccgctccc gcgcccggtt gagatcgcgg
     2341 agcaggaccc agaacggcag ctggtaccag gccagcgcgc cgagcacccg tagcagcagg
     2401 ttgcgggcga cgtccttccg cgccacatgc gccagctcgt gcagcagcac cgattccgcc
     2461 tcggattcgc cgagcaggcg gtggaggccg accggcacca ccatgatcgg gcggagccat
     2521 ccggttacga aggggctctt ggccccgctc catgcgcgga ctgccggcgc cccttccagt
     2581 ccgactctcg atgccagccg cctgagacca ggaagctcga cggcccggct ctctgtcatg
     2641 atccggcgat tgagccacca gagactcgca agcagatacg ccaacgacag caccgcgccg
     2701 gccagccaga cccccaccac ccactgggcc acatcgaacg tgagctgctg ctgcatcagc
     2761 cgcagtacct tgccgggaat ttcggcccgg gtcagggcgt ctaccggtga agcctgtaac
     2821 tcagccgcga cgccacctgc gagccacgca gcaccggcgg taagaaacgg caggatcgag
     2881 atcagcatca tgccgaccgt cgccgagcgg cactccgtct cggccccatc gcgccgcgcg
     2941 atccgcccga ccacgaggta gaccagcatg accaccgccc cctgccagag ggaatgggcc
     3001 agccagcggc tcgcgacggt tgcggaggcg gagagatcga tcatttgccg ccctgacgtt
     3061 ccagtctgcg aattagttcc ttgagatcgg cgagctcctg ggcggaggcc ggcttggcct
     3121 cgagcgcgtg catagccaga gccgcggcgg agccctcgaa ggcccggtcg atcaacccgc
     3181 gcaccacgcc ctggagggtg tccccctcct tggcgacggc gacgtagacg tgctgccgct
     3241 gggcgtcgtc ccgcttcacc aggtgcttgg cgtgcaggtt ctgcatcagc ttgagcgtgg
     3301 tggtgtacgc cgtgtcggta ccggcataca gcgcctcatg cacctcacgc acggtgctcg
     3361 gccccctgct ccagagaacc cgaagcagct gcagttcggc gggggtgggc gaggcagttg
     3421 tctgcggcac gcgggctccg atcagtacga tggacgtcgt aatatgtacg atgggcgtcg
     3481 tagactgtca agggccattg gccattggcc tttggccgtt ggaactaccc tatcgcgacc
     3541 ttcgtccttg gcgtactgtt agcggcccag ttagaccaaa aggctaacgg ccaatggcca
     3601 acggcctctc aaccgtacac cagctctcac ccgaagaatg cgcgtctacc tctccattga
     3661 tatggaaggc atcgccggcg tcgtgcacga ggatcagacc aatccggtcg atccccgctg
     3721 cgccggcgag tatgcccgct tccgccgtct catgaccttc gaggccaacg ccgccgtcga
     3781 gggtgcgctg gccggtggcg ccacccgggt cctggtgaac gacagccact ggaccatgcg
     3841 gaatctgctg gccgaggagc tgcatccggg ggcggaactg ttgtcggggg gacccaagac
     3901 gtggtcgatg atggaaggta tcgaggccgg gtgggacctc gcggccttca tcgggtatca
     3961 tgccaaggcc ggcacctcca acgccattct cgatcacacc tacaccgacg cgatcagcga
     4021 tgtgcggctc aacggcgcct cggtcggtga gctgggcatc aacgcggcgc tggccggcac
     4081 cttcggcgtc ccggtctcgc tcgtcaccgg cgacaaggcg ctcggcctcg aggcgcgggc
     4141 gctgctgggc gaccgggtcc agaccatcgc ggtgaaggaa gcggtgagcc ggagcgcggc
     4201 ccggcatctc tctcctgaaa ccgcgcgggc cctgatccgc gactcgatgc gcgaggtggt
     4261 ggaagacacc cgccgcaacg gcgtggcccg ggccaagcgc ttcgtgctcc cctcccccgt
     4321 gaccctcgaa gtcgatttcg cccagacggt ccatgcagac caggcggcca tggcccccgg
     4381 cattgcccgc ctcggccccc gcaccgtcac cgcccgctcc gatgatttcc gggaactgtt
     4441 cctcgccttc cggaccatct tcaatctcgc gggcgccgac tgaactgctt gacacagatt
     4501 acgcagatcg gaacggattc atgcctgaga gaccaggata gatggcatct tgagcgcgaa
     4561 gtgcctgact ttcttctgtt tgattcgtct tccctctgtc cacagtcaca gccgaccttt
     4621 ccgtagaacc agttcggatc cgtctcaatc tgtgccatct gtggcaagca gtttcgacct
     4681 gaccgataac cggagcacca atgctgatcg ccagtgcgct ggccctgctg accctcgtct
     4741 cgtccgacac cggcaagaaa aagctcgact ccctccccct cgcgaccacg cgcacgatcg
     4801 aatatgagac cagcgaaggc acctggctgt cgctggacgt ctcgcccgat ggacgcacca
     4861 tcgtgttcga gctgatgggt gatctctata ccctccccat cggcgggggc cgggctgccc
     4921 cgctcaccca cgggccggcc ttcgattccc agccgcgctg gtcgcctgac gggaagcaga
     4981 tcgccttcct gagcgaccgc gacggcggcg agaacatctg gctcatcacc gccgacggca
     5041 cccgcaccac cgaagtgtcc aagggcgata actcgctctt cgcgtcgccc gagtggactc
     5101 ccgacggcaa ctatatcgtc gcctccaaga ccaacgcgcc gctcgggagc agctacgccc
     5161 tctggctctt ccacaaggac ggcggtcccg ggctcaacct gaccaaggac gacaagggca
     5221 cgggggcgct gggccaggga cgcggcacca acatcaacag cctcggcgcc gcattcggga
     5281 aggatggacg ctacatctgg tacgcccgga agcggggcgg gttcggctac aacatcgacc
     5341 tgacccagtg gcagctcgcc atcttcgatc gcgagaccgg gcgaatcttc ccccagaccg
     5401 acatctacgg cagcgccatg cggccggtcc tctc
//
LOCUS       DATIFF010000371         5539 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_511229, whole genome shotgun sequence.
ACCESSION   DATIFF010000371 DATIFF010000000
VERSION     DATIFF010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5539
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_511229"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..889)
                     /locus_tag="VLD58_05560"
     CDS             complement(<1..889)
                     /locus_tag="VLD58_05560"
                     /inference="COORDINATES: protein motif:HMM:NF013457.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015485 - cholesterol binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol-activated cytolysin family protein"
                     /protein_id="HSB53799.1"
                     /translation="MSPGTHRGRWLVAALLAGCVLTGIACGDDNGTAPVRSTFEDVIA
                     SGGDLPEVTEHNVVTDSVSSTELRGNENWSCVSRTYDVTKAPEDFPLFDPNSEVIFPG
                     NLLQGKSLVHATPEPIPVRRGGGTIVVTLNNGATTGVSRTVPVVSLGSIYEAANEIIG
                     TNPGNLPARFNFATERVASERQLSVATNASWEAYSLWKMKGGLSVDVATRRNHNKFLV
                     KLNQAFYTVAFELPTSPELMFADDVTPDELKPYIGSGNPATFISSVTFGRIFYLLIES
                     TQSADSIAASINLSFSGALG"
     gene            complement(1187..1984)
                     /locus_tag="VLD58_05565"
     CDS             complement(1187..1984)
                     /locus_tag="VLD58_05565"
                     /inference="COORDINATES: protein motif:HMM:NF014609.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HSB53800.1"
                     /translation="MPQPITVVDAFADQPFSGNPAGVCVLAEPVSDDWMRLVARELNL
                     AETAFLLPTNDGFSLRWFTPTVEVDLCGHATLASAHVLWQQGFLPATEIARFHTRSGL
                     LLARPRGDLIELDFPAREASEVAPPDTLLPALGVPRPRWVGKNVYDSMVELGTEQEVV
                     ALKPDLGVIGKLPVRGVIVTSVADEGRPYDFVSRFFAPGAGVPEDPVTGSAHCALAPY
                     WRPRIGRDAMTGFQASARGGIVHTTVAGDRVMLAGRAITTLRGVLMA"
     gene            complement(1992..2378)
                     /locus_tag="VLD58_05570"
     CDS             complement(1992..2378)
                     /locus_tag="VLD58_05570"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HSB53801.1"
                     /translation="MRRNISSGARWEPVVGYSRAVRVGNTVHVAGTAPVAPDGGVFAP
                     GDPYAQARRCLEIVEAALKEAGASLRHVVRTRMFVTDISQWEAIGRAHGEFFRDIRPA
                     TSMVQVSRLIDPAMLVEIEADAVIED"
     gene            complement(2427..2885)
                     /locus_tag="VLD58_05575"
     CDS             complement(2427..2885)
                     /locus_tag="VLD58_05575"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB53802.1"
                     /translation="MIVLIVDDEAVSRRVLRRLLSRFPQLELHEAGNGQVAWEMLGTT
                     EPALILCDLLMPVMDGVTLIRKLREHPVLKSVPVIVTSASKDRDMVLELKDLSLTDYL
                     LKPFDLVQTFARLEKHIAPLLRRHLAAKAAEAEAAAAPAPVRVFTPPPTA"
     gene            complement(2882..4471)
                     /locus_tag="VLD58_05580"
     CDS             complement(2882..4471)
                     /locus_tag="VLD58_05580"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB53803.1"
                     /translation="MRPPFRSDLRLDPYPMPSMDSVASGATDRAVLSAFPDALLLLDP
                     LGLVRDANPAAERLFGRPLEALRTAALDRLISLPGNGALGALLRSGRLGATERWPGSR
                     GRTIDGQEFDCDLSATPLAGPGAPARWLVVVTPTASRDFALTQRQESAKMSAVATLAA
                     GIANDFNNALAAISGSIETARLRILSQNRVPPRELIEVKEATRGAARLVRRLLNFARP
                     SPGIRKPIDPNRIVEETRQVLDRDLDPRITLVTRLDHGDWRIRADLEQLTDLLVSLGH
                     NAIEAMPHGGVLTLATARAAAGAWGAPAAIASREFVRIEVRDTGEGIPPDVLPRIFEP
                     FFTTKEAGRGSGLGLATAYATLRHHEGGITVESAPGAGSLFQIYLPRTHDVAGEPAPS
                     RAIEPGTGRGTILLVDDEASVRRPLRHGLGLCGYTVVEAADGLEALRLHGQQATHIDL
                     VVLDVKMPGMSGWDVLGELKRRNPSLPVILTSGYTQEDSTPPANASTPDAYIPKPYDL
                     AELTGQVRRLLPNAPEGDAAS"
     gene            complement(4476..>5539)
                     /locus_tag="VLD58_05585"
     CDS             complement(4476..>5539)
                     /locus_tag="VLD58_05585"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HSB53804.1"
                     /translation="EDLELILAEARRAGEIVHGLLASARQHPPEWCICSLADVVRRAV
                     ALSRHHLKLHNVSLQSPMFDPLEGYPLWSRMRGDANQLQQVILNLIINAQQAISATRG
                     YGSVRVTLAPDSADRVVLTVEDDGPGIPESLRETIFQPFYTTKPAGKGTGLGLSISAG
                     IIEAHGGAIAASSREGGGAVFTVTLPSLAASERGQGHGTGVQLVPATETVELPSPASA
                     AENGLLRVLLVDDEAGVRRSISRLLRRSGFSVTEASGGEAALELLRQARFDVVLSDLR
                     MPGLSGEEFFARIQREFPAMAGRVVFTSGDTLREDTQAFLQSSGCPSLQKPYELSELV
                     GVLRSLRTPDSAGARRASA"
BASE COUNT          863 a         1843 c         2000 g          833 t
ORIGIN      
        1 tccccagcgc gccgctgaac gagaggttga tcgaggcggc gatgctgtcg gcgctctggg
       61 tcgactcgat cagcaggtag aagatccggc cgaaggtgac cgaggagatg aacgtggcgg
      121 ggttgcccga gccgatgtac ggcttgagct cgtccggcgt cacgtcgtcc gcgaacatca
      181 gctccggcga ggtcggcagc tcgaacgcca ccgtgtagaa cgcctggttc agcttgacca
      241 ggaacttgtt gtggttgcgg cgggtggcca catccaccga gagcccgccc ttcatcttcc
      301 acaggctgta ggcttcccag ctggcattgg tcgccaccga gagttgccgt tcggacgcca
      361 ctcgttcggt ggcgaagttg aaccgggccg ggaggttgcc gggattggtc ccgatgatct
      421 cgttagccgc ctcgtagatc gagccgagtg agaccaccgg cacggtccgg ctgaccccgg
      481 tggtggcgcc gttgttgagc gtcaccacga tggtgccgcc gccccggcgg accggaatcg
      541 gctcgggcgt ggcgtgtacg aggctcttcc cctggagcag gttgcccggg aagatcactt
      601 cggagttggg gtcgaacagc gggaagtctt cgggggcctt ggtgacatcg taggtccgcg
      661 agacacagga ccagttctcg ttgccccgga gctcggtact gctgaccgag tcggtgacga
      721 cgttgtgctc cgtgacttcc gggaggtccc cgccgctggc gatgacatcc tcgaaggtcg
      781 atcggacggg ggcggtgccg ttgtcatcac cacatgcgat cccggtcagg acgcaaccgg
      841 ccagcagggc ggcaacgagc cagcgcccgc gatgggtgcc tggcgacatg gccattgacc
      901 tcctacccgg gcggcgggcc caggcatcag gtgaactgcg actcaggagt gatggagagg
      961 aaggctggaa gctctgccgg cgggaaaaca ttgagacggc tcgctcataa gcggcgcccc
     1021 agtggcacgg cagaccgtca gtgcgtcacc gccctggcag gggcgcatgc cagcccggga
     1081 tcgggccggc attcggtgac taaagtgaca ttgagcggct gaaagcgggg tgaaatcgat
     1141 cggaaaggga gaatcaggga cggaattgtc agggatgacg agaccttcac gccatcagca
     1201 cccctcggag tgtggtgatg gcccgtcccg ccagcatcac gcgatcgccc gccaccgtgg
     1261 tatgcacgat gccgccccgt gccgaggcct ggaacccggt catggcgtcc cggccgatcc
     1321 gcgggcgcca atagggggcc agggcgcagt gggccgaccc ggtgaccgga tcttccggaa
     1381 cgcccgcgcc gggggcgaag aagcgggaga cgaagtcgta cggccggccc tcgtcagcca
     1441 cactcgtcac gatgacgccc cgcaccggca gctttccgat cacgcccagg tccggcttga
     1501 gggccacgac ttcctgctcg gtcccgagct ccaccatgga gtcgtagacg ttcttcccga
     1561 cccagcgggg ccgggggaca ccgagcgccg gaagcagggt gtcgggcggg gccacctcgc
     1621 tcgcctcccg ggcggggaag tcgagctcga tcaggtctcc ccttggccgc gccaggagca
     1681 gtccactccg ggtgtggaac cgggcgatct cggtcgcggg aagaaagccc tgctgccaga
     1741 gcacgtgcgc gctcgcgagg gtggcgtggc cgcagagatc gacttcgacg gtgggggtga
     1801 accagcggag cgagaatcca tcgttcgtcg ggagcaggaa ggcggtctcc gccaggttca
     1861 gctcccgcgc caccagcctc atccagtcgt cgctgaccgg ctccgcgagc acgcacaccc
     1921 cggccgggtt gccgctgaac ggctggtccg caaaggcgtc gacgacggtg atgggctggg
     1981 gcatgtcggg gtcagtcctc gatgacggcg tcggcctcga tctccaccag catggccggg
     2041 tcgatgaggc ggctcacctg caccatgctc gtggcggggc ggatgtcacg gaagaactct
     2101 ccgtgggccc ggccgatcgc ctcccactgg ctgatgtcgg tgacgaacat gcgggtgcgg
     2161 accacgtggc gcagggaagc gcccgcttcc ttgagcgccg cctccacgat ttcaaggcag
     2221 cgccgggcct gggcgtaggg gtcgcccggg gcgaacactc ctccgtcggg ggcgaccggc
     2281 gccgtgcccg ccacgtgcac ggtgttcccc acccgtaccg cccggctgta gcccaccacc
     2341 ggttcccacc tggcaccact cgagatattg cgtcgcatgg ctggaggtta agtgccgcca
     2401 cggacgggag caacggcgcg ctggtttcag gccgttgggg gcggggtgaa gacgcggact
     2461 ggcgcggggg ctgcggccgc ttcggcctcg gcagccttcg cggcgagatg cctccggagc
     2521 agcggcgcga tgtgcttctc cagccgcgca aaggtctgca ccaggtcgaa cggcttgagc
     2581 agataatcgg tgaggctgag gtccttgagc tcgagcacca tgtcccggtc cttgctggcc
     2641 gaggtcacga tgaccggcac actcttgagg accggatgtt cccgaagctt ccggatcagc
     2701 gttaccccgt ccatcaccgg catcagcaga tcgcacagaa tgagcgccgg ctcggttgtg
     2761 ccgagcatct cccacgccac ctgtccattc cccgcctcgt gcagctccag ctgggggaag
     2821 cgggagagca gccggcggag tacccggcgg ctgaccgctt cgtcgtccac gatgagcacg
     2881 atcacgacgc ggcatctcct tccggcgcgt tcggcagcag gcggcggacc tgtcccgtga
     2941 gctcggccag gtcatacggc ttcgggatgt aggcgtccgg ggtggaagcg ttggccggtg
     3001 gcgtgctgtc ttcctgggtg tagccgctgg tgagaatcac cggcagcgag gggttgcgcc
     3061 gcttgagctc gcccagcaca tcccaccccg acattcccgg catcttcacg tcgagtacga
     3121 ccagatcgat atgggtggct tgctggccat gcagccgcag cgcctcgagt ccgtcagcgg
     3181 cctccaccac ggtgtaaccg caaaggccga ggccatggcg aagcggccgg cggacggagg
     3241 cctcgtcgtc caccaggaga atggtgcccc gcccggtgcc cggctcgatc gcccggcttg
     3301 gcgccggctc gccggcgaca tcgtgggtcc gtgggaggta gatctggaac aggctcccgg
     3361 cgccgggcgc gctctccacc gtgatgccgc cctcgtgatg ccgcagcgtg gcgtaggccg
     3421 tcgcgaggcc cagcccggag ccccggccgg cctccttggt ggtgaagaac ggctcgaaga
     3481 tccgcggcag cacgtcgggc ggaatgcctt cgccggtgtc gcgcacttcg atccgcacga
     3541 attcccggct cgcgatcgcg gcgggcgcgc cccaggcccc agccgcggcc cgggcggtgg
     3601 cgagcgtcag caccccgcca tgcggcatcg cctcgatggc gttgtgcccc aggctgacca
     3661 gcaggtcggt gagctgttcc aggtcggccc ggatccgcca gtcaccatga tcgagccggg
     3721 tgaccagggt gatgcgggga tcgagatcgc ggtccagcac ctggcgcgtc tcttccacga
     3781 tccggttggg gtcgatcggc ttgcggatgc cgggcgaggg ccgcgcaaaa ttgagcagcc
     3841 gccgcaccag ccgggcggcg ccgcgggtgg cctccttcac ttcgatgagt tcgcggggtg
     3901 gcacccggtt ctgcgagagg atccggagcc gcgcggtctc gatgctgccg ctgatggcgg
     3961 cgagcgcatt gttgaagtcg ttcgcgatac cggcggcgag ggtggccacc gccgacatct
     4021 tggccgactc ctgccgctgg gtgagcgcaa agtcgcggct cgccgtcggg gtgaccacca
     4081 ccagccagcg ggccggcgcg cccggtccgg cgagcggcgt tgccgagagg tcgcagtcga
     4141 actcctgccc gtcgatggtg cggccccggg acccgggcca gcgctcggtc gcgccgaggc
     4201 ggccggagcg gagcagggca cccagggcgc cattgccggg gagggagatc agccggtcga
     4261 gcgccgcggt gcggagcgct tcgagcggcc gtccgaagag ccgctccgcc gcgggattcg
     4321 cgtcacgcac cagcccgagc ggatcgagca gcagcagcgc atcgggaaag gccgagagca
     4381 cggcccggtc ggtcgcacct gaagccaccg agtccatgga cggcatggga tacggatcga
     4441 gtctgaggtc ggagcggaac ggggggcgca tgggctcagg ccgacgcgcg ccgggcgccg
     4501 gcgctgtccg gcgtgcggag cgagcggagc acgccgacca gctcggacag ctcgtacggc
     4561 ttctgcagcg acgggcagcc gctggactgg aggaacgcct gggtgtcttc ccgcagggta
     4621 tcaccgctgg tgaagaccac ccggccggcc atcgccggaa actcgcgctg aatccgggcg
     4681 aagaattcct cgcccgagag gcccggcatg cggagatcgg agagcaccac gtcgaagcgc
     4741 gcctgccgga gcagctcgag ggccgcctcg ccacccgacg cctcggtcac cgagaaaccg
     4801 gagcggcgaa gcaggcggct gatgcttcgc cgcaccccgg cctcgtcatc caccagcagc
     4861 acccggagga gcccgttctc ggcggcggag gccggcgagg ggagttccac cgtttcggtc
     4921 gccggaacca gctgtactcc ggtcccgtga ccctggcccc gttcgctggc ggcgagtgat
     4981 gggagcgtca cggtgaagac cgcgccgcct ccctcgcggc tgctcgccgc gatggcgcca
     5041 ccgtgggcct cgatgatccc cgccgagatc gaaaggccga ggccggtgcc tttgccggcg
     5101 ggcttggtgg tatagaacgg ctggaagatc gtctcgcgga gcgactcggg aatgcccggg
     5161 ccgtcatcct ccaccgtcag caccacccgg tcggcgctgt caggcgcgag cgtgacccgc
     5221 accgagccgt agccccgggt ggcactgatc gcctgctggg cgttgatgat caggttgagg
     5281 atcacctgct gcagctggtt cgcgtccccc cgcatgcggc tccagagggg gtagccctcg
     5341 agcgggtcga acatcggtga ctggagcgag acgttgtgga gcttgagatg atggcgtgag
     5401 agcgccaccg cccgccgcac cacgtcggcc agcgagcaga tgcaccactc gggcggatgc
     5461 tgccgcgccg aggcgaggag cccgtgcacg atctcgcccg cgcggcgagc ctcggccagg
     5521 atgagctcga ggtcttccc
//
LOCUS       DATIFF010000372         1765 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_818259, whole genome shotgun sequence.
ACCESSION   DATIFF010000372 DATIFF010000000
VERSION     DATIFF010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1765
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_818259"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(53..1174)
                     /locus_tag="VLD58_05590"
     CDS             complement(53..1174)
                     /locus_tag="VLD58_05590"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSB53805.1"
                     /translation="MTTRFLSGSLLFGLLLVASGCKKEAPRRPAPPTVVAGVVEQRDV
                     PLVLEATGTVEPIQAAVVAAQVDGIIERVTFREGEEVTRGQVLFQIDPRPYEAALQEA
                     EATLAGDLGQLKSLERDRDRFEELAKREFVTAQQLDQARSSANTGISRVKADSAIVAR
                     ARLDLDRATVRAPISGRAGGVLLKEGNLVRAGSSEPLVVINQISPILVRFAVPATQLG
                     AVRNARAGLPLIATPVGDTGRPVSGSLTFVDNAVDSLTGTILLKGSFPNRERSLWPGG
                     LVRVALTLSVEKGALVVPVSAVLTGQQGSSVYVVEDSNRVSLRKVTVARTTDTLAVLA
                     SGVKAGDRVVTMGQVRITDGATVQVISGGAGTDSAGGSP"
     gene            complement(1171..>1765)
                     /locus_tag="VLD58_05595"
     CDS             complement(1171..>1765)
                     /locus_tag="VLD58_05595"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSB53806.1"
                     /translation="RPDLAAAQAEYDQARARISVTRSQRLPSITSSGNFGYTKVAGQP
                     GSWADSYTLTLGLQIPLFNGFTWEYSQQAAQADAEAARARAEGLRQQVVFEVFRSYYA
                     LRTSIARVTSADELLRSASQSAEAARGRYQGGVGSLIELLTAESALASARAQRIQARL
                     GWQAALVQLSRDAGLLDLQGQSPLHLAPSGTSTDSLP"
BASE COUNT          273 a          630 c          598 g          264 t
ORIGIN      
        1 gccatgacca gcgtggtcat gaccggacgc ttgatgaaaa gttcggcgat gctcatggac
       61 tgccccctgc actgtcggtc ccagcgccgc ccgagatgac ttgtaccgtc gccccgtcgg
      121 tgatccgcac ctgtcccatg gtgaccaccc ggtctcccgc cttcacgccg ctcgccagca
      181 cggcgagggt gtcggtggtg cgggccaccg tgaccttcct gagcgatacc cggttgctgt
      241 cttccacgac atagaccgag gacccctgct ggccggtgag caccgcgctc accggcacca
      301 ccagcgcgcc tttctccacg gacaaggtga gcgccacccg caccaggccg cccggccaca
      361 gactccgctc ccggttcggg aagctcccct tgaggagaat cgtcccggtg agcgaatcga
      421 ccgcgttgtc gacgaacgtg aggctgccgg aaaccgggcg gccggtgtcg ccgaccggtg
      481 tggcgatgag cggcagcccg gcacgcgcat tccgcaccgc gccgagctgg gtggccggca
      541 ccgcgaagcg aaccaggatg ggggagatct ggttgatcac caccagcggc tcgctgctgc
      601 ccgcgcgaac caggtttcct tcctttagaa gcacgccgcc ggcccgtccc gagatcggcg
      661 cccgcaccgt ggcccggtcc agatccagcc gggcccgggc cacgatggcg gagtccgcct
      721 tgacccggga gatccccgta ttggcgctgc tccgggcctg gtccagttgc tgcgccgtca
      781 cgaactcccg cttggccagt tcctcgaagc ggtcgcggtc acgctcgagc gacttgagtt
      841 gccccaggtc tcccgccagg gtcgcctcgg cctcctgcaa tgctgcctcg tacgggcgcg
      901 ggtcgatctg gaagagcacc tgcccgcggg tgacctcctc gccttcgcgg aaggtcaccc
      961 gttcgatgat gccatccacc tgcgccgcga ccaccgcggc ctggatcggc tcgacggtac
     1021 cggtcgcctc gagtaccagg ggcacatcgc gctgttccac cacgcctgca accaccgtgg
     1081 gcggcgcggg gcgccgcggc gcctccttct tgcaccccga agcgacgagg agcaggccga
     1141 acagcaggga accggaaaga aaccgcgtgg tcatggcagc gaatcggtgg aggtgccgga
     1201 aggagcgaga tgcagcggac tctgtccctg gagatcgagc aggccggcat cgcgcgagag
     1261 ctgcaccaac gcggcctgcc agccaagccg ggcctggatc cgctgggcgc gggcgctggc
     1321 gagagcgctc tcggcggtga gaagctcgat caggctcccc actccaccct gataccggcc
     1381 ccgcgccgcc tcggccgatt ggctggccga gcggagcagc tcgtcggcgc tggtgacccg
     1441 cgcgatcgag gtgcggagcg catagtacga gcggaacacc tcgaaaacca cctgctgccg
     1501 gagcccttcg gcccgggccc gggcggcctc ggcgtcagcc tgcgcggcct gctgactgta
     1561 ctcccaggtg aagccgttga agagcggaat ctggagcccg agcgtcaggg tgtagctgtc
     1621 ggcccaggaa ccgggctggc ccgccacctt ggtgtatccg aaattgccgc tcgaggtgat
     1681 cgagggaagc cgctgcgaac gggtgacgga gattcgcgcc ctcgcctggt cgtactcggc
     1741 ctgggccgcg gcgagatcgg gccgc
//
LOCUS       DATIFF010000373        12642 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_973033, whole genome shotgun sequence.
ACCESSION   DATIFF010000373 DATIFF010000000
VERSION     DATIFF010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12642
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_973033"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1073)
                     /locus_tag="VLD58_05600"
     CDS             complement(<1..1073)
                     /locus_tag="VLD58_05600"
                     /inference="COORDINATES: protein motif:HMM:NF017346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate-utilizing N-terminal
                     domain-containing protein"
                     /protein_id="HSB53807.1"
                     /translation="MSDERQIRGIGVSPGPGFGRAVIVRLDVPDVPNRFITDAEVETE
                     LKRLHEAVQEVSELLEHLRERVRERAGREESHIFDAQIMMAQDTDFLKGVEQLIRESA
                     MSAETAYEFKALEIRNIWGGSGNALLRDRLADLSAIHNRMLLKLLGRPQDEFWATMTD
                     EQVVIVAKELAPGLTVQLDRDHVVGLVSEEGTRTSHAAILAHSLGIPAVMGAVGALER
                     IKPGTQLLIDGQSGSVILEPTRAEIERVRAQVSRRQKLELEFEAAVTQAAITPDGVAI
                     TLMGNVDLPDEIIPAAKHDAHGVGLLRTEFLVTGRAALPTEDEQTEYFRRVSDAFPGY
                     PVIVRSFDLGGDKFPAAFRAPPEA"
     gene            complement(1070..1336)
                     /locus_tag="VLD58_05605"
     CDS             complement(1070..1336)
                     /locus_tag="VLD58_05605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HSB53808.1"
                     /translation="MIEREARIVNQLGMHARPAAALVKLASGFKSEIEVVKDGMVVNG
                     KSIMGVMMLAAECGSSVMLRTTGPDEEAAMQALLALVAGGFGET"
     gene            complement(1333..2070)
                     /locus_tag="VLD58_05610"
     CDS             complement(1333..2070)
                     /locus_tag="VLD58_05610"
                     /inference="COORDINATES: protein motif:HMM:NF015570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HSB53809.1"
                     /translation="MRGGTARALWRLCAVQGAWNYERMTGVGMGHAAEPLLEDLKSAD
                     PARHAEAAVRAADYFNSHPYLAGLALGALVRAEYDLVPGAQITRLRAALTSPLGALGD
                     QFFWAGAVPATMGLAILGVVSGHGLWPIVLLLVLYNAGRIATGVWALRTGLANGMKVG
                     VALGESWLPRSTTLAGLVAGAVVGLAVPLAADWLLDPLDLRAVWVTVATLLVGLAASW
                     KLGPRITAVKFGLVAIGVALLLAWGLP"
     gene            complement(2067..2741)
                     /locus_tag="VLD58_05615"
     CDS             complement(2067..2741)
                     /locus_tag="VLD58_05615"
                     /inference="COORDINATES: protein motif:HMM:NF015566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HSB53810.1"
                     /translation="MALSPGSFALLAAWGTLSGMDLVTFPQGLFSRPLIACAGSGLIL
                     GDVPAGLVVGVLLELFALDVLPVGASRYPDYGPGAVGAVLLTSGGVWDERLGIAALFA
                     LAMAVLGGWSLVWLRQVNGKLIHQGAAGLAAGDADTIARIQHRGLAGDMVRSLGLTVV
                     ALILAQSLAPHLPGGPRFTLVTAVAVGAGVAAAAGGAVRSAGRTARLRWLAAGTGVGL
                     LVAVLT"
     gene            complement(2741..3214)
                     /locus_tag="VLD58_05620"
     CDS             complement(2741..3214)
                     /locus_tag="VLD58_05620"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF015769.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HSB53811.1"
                     /translation="MPIVLYRVDDRLVHGQVVIGWGKPLNLGFIVLVDDAVYGSEWER
                     DLYRMGTPPDIELRFADIAEACRLHATWRAEPASGLVLTADIGTMAALRQGAPPVPKL
                     NLGGIHHKPGRTPRLPYIYLSDEEYRVLEAMQASGTVVTAQDLPTTPPVPLEALA"
     gene            complement(3214..3588)
                     /locus_tag="VLD58_05625"
     CDS             complement(3214..3588)
                     /locus_tag="VLD58_05625"
                     /inference="COORDINATES: protein motif:HMM:NF015567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53812.1"
                     /translation="MSDGLRGVVVAHGALAQALVDEAERISGQAGVLVAVSNQGGSKE
                     EIEARLVSAVAGEPAVVFVDMPCGSCFFAAMHLARLAPAVKVVTGVNLPMLLDFVYNH
                     ALPPDQGAERAAVKGHDAIRKP"
     gene            complement(3581..4546)
                     /gene="hprK"
                     /locus_tag="VLD58_05630"
     CDS             complement(3581..4546)
                     /gene="hprK"
                     /locus_tag="VLD58_05630"
                     /inference="COORDINATES: protein motif:HMM:TIGR00679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr(Ser) kinase/phosphatase"
                     /protein_id="HSB53813.1"
                     /translation="MSLTLREILSRKGDPLQLEPLTGEAGLDRPLPDPEVASPGLALA
                     GYTGRFMPRRLHVLGETEISYLNSLEAGERRSRLEKFFEFDLPCVFVTKGQEVPAELL
                     EFARQRGIPLLRSKLKTAEFYRRLKPIVEESFAPRTTLHGSLADVYGVGLLFIGQSGI
                     GKSECVLDLVERGHRLVADDIVQVARRGRDILIGSGHELAAHHMEIRGIGLVDIPALF
                     GVRAVRQQKRIEVVVQLEAWEKAKDADRTGLQQLETTILDVTIPRVIVPLNPGKNITV
                     ISEVVAMMHLLRFAGVDVAAAFNQRLIKKMREKQGLREYLQEDYE"
     gene            complement(4543..4854)
                     /locus_tag="VLD58_05635"
     CDS             complement(4543..4854)
                     /locus_tag="VLD58_05635"
                     /inference="COORDINATES: protein motif:HMM:NF014534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPF/RaiA family ribosome-associated protein"
                     /protein_id="HSB53814.1"
                     /translation="MRTTISARHCEISDELRQRADEVLKRLEAMVNRPVDGTIVFDVA
                     PQLSTVEIRIHSSSGELFVATGEDKDHRSALDRAEEKVKRQLEKAAGTRRDRGARDAA
                     L"
     gene            complement(5060..6169)
                     /locus_tag="VLD58_05640"
     CDS             complement(5060..6169)
                     /locus_tag="VLD58_05640"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSB53815.1"
                     /translation="MNILLVNWQDRMNPQSGGAEIHLHEIFGRLAARGHRVRLVCSGW
                     AGGETRAMVDGMEVHRTGNRNSFTLLGRGAVRRALKAERPDVVVEDVNKVPLFLAGMT
                     DRPFGVIVPHLFGSTIFQEASLPSALLVWAMEQPLPWAYRRAGFHAISESTRDDLIER
                     GVPAGRITVIYPGVDARAFTPDATVPRTAYPSFVYVGRLRRYKGVEFALRAVAIARAK
                     RPDIRLRIAGRGDDQARLVALAKELGQEEAVEFLGFVSEAEKMRLFRSSWANIFPSPK
                     EGWGITNVEAAACGTPSLASNSPGLRDSVRDGQTGYLVPHANAESLAGKMLALAEDPG
                     LVARLGQQARAFAESLSWDRAADETEAWLAGLVEE"
     gene            complement(6166..6576)
                     /gene="nusB"
                     /locus_tag="VLD58_05645"
     CDS             complement(6166..6576)
                     /gene="nusB"
                     /locus_tag="VLD58_05645"
                     /inference="COORDINATES: protein motif:HMM:TIGR01951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HSB53816.1"
                     /translation="MLRPETKARARALQILYSMEIGNGSLDDAVTRLARLTGPDPNVY
                     DGAETLADAVLKERDELDRHASDAADNWRLERIAPVERNILRIGVHELLKGDVPPKVA
                     IDEAVQLAHWFGGAKAPSFVNGVLDRVAHSIGRL"
     gene            complement(6563..7042)
                     /gene="ribH"
                     /locus_tag="VLD58_05650"
     CDS             complement(6563..7042)
                     /gene="ribH"
                     /locus_tag="VLD58_05650"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: protein motif:HMM:NF013081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HSB53817.1"
                     /translation="MPEFKGQLRLAGRVAILVSQYNERVTGRLLEGALACCHDAGVPE
                     SQIDVVWLPGAFELGGAAAAAAGTGRYAAIVGLGAVVRGETAHFEFVAGEAARGLSEV
                     AVRHELPVAFGVLTTETMDQALARAGGAAGNKGYEATEAAIRTADALAQLRKSHAQT"
     gene            complement(7047..8252)
                     /locus_tag="VLD58_05655"
     CDS             complement(7047..8252)
                     /locus_tag="VLD58_05655"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA];
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HSB53818.1"
                     /translation="MTFGNIAQAIEDLQNGKPIIVADDEDRENEGDLICAAELVTPEV
                     INFMITHARGWVCLALMPERCEELGLQQMEAQNTEAQRTAFTVTIDASSRHGVTTGIS
                     ASDRAKTIHVAINPSTVPGDLRRPGHIQPVRARPGGVLQRVGHTEAAVDLARLAGLYP
                     AGVICEILNEDGSPSRRPQLEEFAARHGLTFVTIAQLVAHRLANEQLVHREAEARLPT
                     EFGEFRIIAYANDVDRAQHVALVKGEIEGAKDVLVRMHSKCLTGDVFASQRCDCGPQL
                     HQAMKLIAEAGRGAIVYLDQEGRGIGLHNKIKAYALQDEGDDTVQANQRLGFAPDLRN
                     YGIGAQILRDLGLSSIRVMTNNPRKLVGLEGYGLEIVERVPLVADPNDENRAYLDTKR
                     DKLGHLLAH"
     gene            complement(8265..8861)
                     /locus_tag="VLD58_05660"
     CDS             complement(8265..8861)
                     /locus_tag="VLD58_05660"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HSB53819.1"
                     /translation="MFTGIVTAIGVVRAARMSAKGLTLRIGAPYRGVKTGESIAVDGA
                     CLTVERKGKGWFEVHVIRTSLERTTFSEYARGTRVNLERALRIGDRLGGHMVQGHVDG
                     VGTVLRTARHGDAWLIDLGVPEDVARVTIPLGSITVEGVSLTVNAIPEPGIVQVSLIP
                     FTFEHTTLGTLEPGDSVHLEGDTIAKYVESLLEPRKRS"
     gene            complement(8843..9934)
                     /gene="ribD"
                     /locus_tag="VLD58_05665"
     CDS             complement(8843..9934)
                     /gene="ribD"
                     /locus_tag="VLD58_05665"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: protein motif:HMM:TIGR00326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HSB53820.1"
                     /translation="MNHFAAMGRALELAWRGWGRVAPNPLVGAVVLQGDQVVGEGWHA
                     EYGDLHAEAAALQKAGGAARGATVVVTLEPCNHRGKQPPCTEALIAAGVAQVIVAAAD
                     PNPVAGGGADRLRAAGIQVALGLRGDEARAQNAVFFHEHREPARPFVALKLATTLDAR
                     IADHAGRSRWISGDEARDYVHWLRAGFDAIGVGAHTATVDDASLTVRGPVEPRRPPVR
                     VVFSRQGDVSASLGLVRSAREIPTILVAASHGPTGRIAPLEEAGVEVLWVTSLMEGLG
                     MLRQRGISSLLVEGGGRLAGALLKEGLVDRYYWIQSPVWLGDAGVPAVTGLPGTTLVE
                     AERWEVVERRALGQDTLLVLDREPCSPAS"
     gene            9994..11580
                     /locus_tag="VLD58_05670"
     CDS             9994..11580
                     /locus_tag="VLD58_05670"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSB53821.1"
                     /translation="MRIYWPDGRPSAARTFWPTIRLPLGLFVFVILTRLPALLSPKAL
                     DDEQVYAVVAREMLHGGRPYLDAVERKPPLLFLLYEQILKLGDHDWFALHLVAVLWTL
                     ATMAVLYLIARRLFDQTTGYWAAFLYALFVAWADYRSLALNGELLMNLPAMAAVAVAF
                     AQSRSRWRPELLLSGALVALAFLLKQPAGIVAPALGLYLLTPAYRRERQLPAGYPVLH
                     AGLLTIGFSTVFVLTGLWLWHDGILYQAVYWTVLDHGVPRGPTTWPFWRGALLRGGFF
                     ALSVLPLILATLESVHPGMRAKRIWRGLKAEYLGLLFLLGGSLIGVAAGGQFLYHYFL
                     QLVPPLCLLAAPIFSEVWRQHLRPYLALPSRPILGVWLGLLTGLFLVVDALGVATHDK
                     PGEAAIYVRDHSNVSDRLFVWGQGDRFTGFYLDAERRPATRYIATYPLTGHIFGVWDP
                     GVNTSHRIVAGAWDSLRVDFERHPPRFIINTDGIFQPPAYPIKDYTFLQGYLTRYYRE
                     VYRARDGVVYERVSALRQSS"
     gene            complement(11794..>12642)
                     /locus_tag="VLD58_05675"
     CDS             complement(11794..>12642)
                     /locus_tag="VLD58_05675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53822.1"
                     /translation="ICQAGADALVLFLPVEAALVGGGNPVPGTASALGQFGRFRLAGR
                     IGLVQLTIPDASFDGTSDTVSADKRLLIPMPRLDLDVGIFSRKLPVGTASVDLLGSAV
                     IVPIGASSRYRLDPNARRIGDLALGLGFGLRAAMAMAGRKPTVSLNVMKRDMPAIIFG
                     NLANGDQLSASTTLSVINARLLVGGHLGPLELTGGGGIDLIKGKGRVAFHDPVAGTDS
                     SIALALSTSRINTLLNASLIVGPLKLWGEGGFLVGKDEGVLTTFERIDPAGGQFYGGV
                     GVALGF"
BASE COUNT         1960 a         4560 c         4139 g         1983 t
ORIGIN      
        1 gcctcgggcg gcgcccggaa tgcggccggg aacttgtcgc ccccgagatc gaaggagcgc
       61 acgatcaccg ggtatcccgg gaaggcatcg ctgacccggc ggaaatactc ggtctgctcg
      121 tcctcggtcg ggagcgcggc gcggcccgtc accaggaatt cggtacggag cagccccacg
      181 ccgtgggcat cgtgcttggc ggcgggaatg atctcgtcgg ggagatcgac gtttcccatc
      241 agcgtgatcg ccacgccgtc gggcgtgatc gccgcctggg tgacggcggc ctcgaactcg
      301 agctcgagct tctggcgccg cgacacctgg gcccggaccc gctcgatctc ggcccgggtc
      361 ggttccagga tgacgctgcc gctctgcccg tcgatcagga gctgggtccc cggcttgatc
      421 cgctccagcg cacccaccgc gcccatgacc gccgggatgc cgagcgaatg ggccaggatg
      481 gcggcgtgcg aggtgcgggt gccctcctca ctcaccagtc ccaccacatg atcccgatca
      541 agctggaccg tgagccctgg tgccagctcc ttcgccacga tcaccacctg ctcgtcggtc
      601 atggtggccc agaactcgtc ctggggccgc cccagcagct tgagcagcat ccggttgtgg
      661 atggcggaaa gatcggcgag ccggtcgcgc aggagcgcgt tccccgaacc accccagatg
      721 ttgcggatct cgagcgcctt gaactcgtag gccgtctcgg cgctcatcgc gctttcccgg
      781 atgagctgct ccactccctt caggaagtcg gtgtcctgcg ccatcatgat ctgggcgtcg
      841 aagatgtggg actcctcgcg cccggcccgc tcccgcaccc gctcgcgcag gtgctccagc
      901 agctcgctca cctcctgcac cgcctcatgg agccgcttga gctcggtctc cacttcggcg
      961 tcggtgatga atcggttggg cacatccggc acatccaggc gcacgatgac cgcccggccg
     1021 aaccccggcc cgggcgaaac cccgataccc cgaatctgcc gttcgtcgct catgtctcgc
     1081 cgaatcctcc cgcgaccagc gccagcagcg cctgcatcgc cgcttcctcg tccgggccgg
     1141 tggtgcggag catgacactg ctcccgcact cggccgccag catcatcacg cccatgatgc
     1201 tcttcccgtt caccaccatc ccgtccttca ccacctcgat ttcggacttg aacccgctgg
     1261 cgagcttcac cagcgccgcc gcgggccgtg catgcatgcc gagctgattc acgatcctcg
     1321 cttcccgttc gatcatggca atccccaggc gagtagcagg gcgaccccga tggcaaccag
     1381 gccgaacttc accgcggtga tccgcgggcc cagcttccac gaggcggcca gcccgacgag
     1441 cagggtggcc accgtgaccc acaccgcccg gaggtcgagc ggatccagga gccagtccgc
     1501 ggcgagcggc acggccagtc ccaccaccgc gcccgcgacc agtccggcca gcgtggtcga
     1561 gcgcggcagc catgactcgc cgagcgccac gccgaccttc atcccgttgg cgaggccggt
     1621 ccgcagggcc cagacccccg tggcgatccg ccccgcgttg tagagcacca gcaggaggac
     1681 gatgggccac agtccgtgac ccgagacgac tcccaggatc gcgaggccca tcgtggccgg
     1741 gaccgcaccg gcccagaaga actgatcgcc cagcgcgccg agcggactgg tgagcgcggc
     1801 gcggagccgg gtgatctgcg ctcccggcac caggtcgtac tcggcccgca ccagggcacc
     1861 gagagccagg cccgcgaggt acgggtggga attgaagtag tccgccgccc gcaccgccgc
     1921 ctcggcgtgg cgcgccgggt cggccgactt gagatcctcg agcagcggct cggcggcgtg
     1981 tcccatgccg acgccggtca tccgctcgta attccaggcg ccctgcaccg cgcagagccg
     2041 ccacagggcc cgtgctgtac cgcctctcat gtaagcaccg ctacgagaag cccgacaccg
     2101 gtacccgccg cgagccagcg gagccgggcc gtgcggcccg ccgaacgcac cgcccctccg
     2161 gccgccgccg cgaccccggc cccgaccgcg actgcggtca ccagcgtgaa ccggggcccg
     2221 cccgggaggt gcggcgccag gctctgggcg agaatcagcg ccaccacggt aagacccagg
     2281 ctccgcacca tgtcgccggc caggccgcgg tgctggatgc gcgcgatggt gtcggcgtcg
     2341 cccgcggcga gccccgccgc gccctggtga atcagcttgc cgttcacctg gcggagccac
     2401 acgagactcc acccgcccag caccgccatc gccagcgcga agagcgccgc gatcccgagg
     2461 cgttcgtccc agaccccgcc gctggtcagc aatactgcgc ccaccgcgcc gggtccgtag
     2521 tccggatagc gcgaagcccc caccggcaac acatccagcg caaacagttc gagcagcacg
     2581 cccacgacca gtcccgccgg cacgtcaccc aggatgagtc ccgagccggc gcaggcgatc
     2641 agcggccggg agaagagccc ctgggggaag gtgacgaggt ccatccccga gagggtgccc
     2701 caggccgcga gcagcgcgaa cgagccgggc gagagcgcca tcaggccagc gcctccagcg
     2761 gcaccggcgg ggtggtcggc aggtcctgcg ccgtcaccac ggttccggag gcctgcatcg
     2821 cttccagcac ccgatactcc tcgtcggaga gatagatgta ggggagccgc ggagtccggc
     2881 ccggcttatg gtggatcccg ccgagattca gctttggcac cgggggcgcg ccctgacgga
     2941 gcgccgccat cgtgccgatg tcggcggtga gcaccagccc actggccggc tcggcccgcc
     3001 aggtggcgtg gagccggcag gcctcggcga tatcggcgaa gcgcagttcg atgtcgggcg
     3061 gagttcccat ccggtagaga tcgcgctccc actcactgcc gtacacggcg tcgtccacca
     3121 gcacgatgaa gccgaggttg agcggcttgc cccagccgat cacgacctgc ccgtgtacca
     3181 gccgatcgtc cacccggtag agcacgatcg gcatcagggc ttccggatgg cgtcgtggcc
     3241 cttcaccgcc gcgcgctcgg cgccctggtc gggtggcagg gcgtggttgt agacgaagtc
     3301 gagcagcatc gggagattca ccccggtcac gaccttcacc gcgggcgcca gcctggcgag
     3361 gtgcatcgcg gcgaagaagc aggagccgca gggcatgtcg acgaacacca ccgccggctc
     3421 tcccgccacg gcgctgacca gccgggcctc gatctcctcc ttgctgccgc cctggttgga
     3481 gaccgcgacc agcaccccgg cctggccgct gatccgttcg gcctcgtcca ccagggcctg
     3541 ggccagggcc ccgtgggcca cgacgacccc ccgcaatccg tcactcatag tcttcctgca
     3601 ggtattcgcg gagtccctgc ttctcccgca tcttcttgat gagccgctga ttgaaggccg
     3661 ccgccacatc cacccccgcg aaacggagca ggtgcatcat cgccacgact tcggagatga
     3721 cggtgatgtt cttgccggga ttgaggggaa cgatgacgcg ggggatggtg acatcgagga
     3781 tcgtggtttc gagctgctgg aggccggtgc ggtcggcgtc cttggctttt tcccaggctt
     3841 cgagctggac cacgacttcg atccgcttct gctgccgcac cgcccggacc ccgaagagcg
     3901 ccgggatatc gaccaggccg atgccgcgga tttccatgtg gtgggcggca agctcgtgcc
     3961 ccgacccgat caggatgtcg cggccccgcc gggccacctg cacgatgtcg tcggccacca
     4021 ggcggtggcc ccgctcgacc aggtcgagca cacactcgct cttgccgatg cccgactgcc
     4081 cgatgaagag gagccccacg ccgtacacgt cggcgaggga gccgtgcagc gtggtgcggg
     4141 gcgcgaagct ctcctccacg atcggcttga ggcggcggta gaactccgcc gtcttgagct
     4201 tgctccggag caggggaatt ccccgttgcc gggcaaactc gagcaactcc gccggaactt
     4261 cctgtccctt ggtgacaaag acgcagggca gatcgaactc gaagaacttc tccagccggc
     4321 tccgccgctc ccccgcctcc agcgagttga gatagctgat ctcggtctcg cccaggacat
     4381 ggagccgccg gggcatgaac cggccggtgt agccggccag cgccagcccg ggcgatgcca
     4441 cttccgggtc gggcagcggc cggtccaggc cggcctcgcc ggtcagcggc tcgagctgga
     4501 ggggatcgcc cttgcgggac aggatctcgc ggagcgtgag gctcacagcg cggcgtccct
     4561 cgcgccccgg tcgcgccggg taccggccgc tttctcgagc tgacgcttca ccttctcctc
     4621 ggcgcggtcc agcgcggagc gatgatcctt gtcctcgccg gtggcgacga acagctcgcc
     4681 ggagctcgag tgaatccgga tttcgacggt ggagagctgg ggcgccacgt cgaagacgat
     4741 ggtcccgtcg accggacgat tcaccatagc ctcgaggcgc ttgagcacct cgtcggcccg
     4801 ctggcggagt tcatcggaga tttcgcaatg ccgggcggag atggtggtcc gcattttcag
     4861 gcctcctcgg cgttagaagc tttccaaact gacgaccgca gaggcgcaga ggcgcagagg
     4921 gtcgcagagg gttcatctca aaagacatgg agtgattcag cagacaaccg aatgctgctc
     4981 tcttgtcaca tcgtttccgc cacaatatct ctgcggccct ccgcgcctcc gcgcctccgc
     5041 ggtgaagcag ttgggcggct tactcctcaa ccaggccagc gagccatgcc tcagtttcat
     5101 cagccgcccg gtcccacgaa aggctttcgg caaaggcacg ggcctgctgc cccagccgcg
     5161 ccaccagccc gggatcctcc gccagcgcca gcattttccc ggcgagcgac tcggcattcg
     5221 cgtgcggcac caggtacccg gtctggccgt cccgtacgga gtcccggagt ccgggactgt
     5281 tcgaagccag ggacggcgtg ccgcaggcgg ccgcctcgac gttggtgatg ccccaccctt
     5341 ccttgggcga cggaaagatg ttggcccagc tcgaccggaa gagccgcatc ttctccgcct
     5401 cgctcacgaa gccgaggaac tccaccgcct cttcctggcc caactctttt gccagcgcca
     5461 ccagccgagc ctggtcatcg ccccggcccg cgatcctgag ccggatgtcg gggcgcttcg
     5521 cccgggcaat cgccaccgcc cggagcgcga actccacccc cttgtaccgc cgcagccgcc
     5581 ccacatagac aaaggaagga taggcggttc ggggtaccgt cgcgtcggga gtgaacgccc
     5641 tggcgtccac ccccggatag atgacggtga tccgcccggc cggcacgccc cgctcgatca
     5701 ggtcgtcccg ggtgctctcg ctgatggcgt gaaaaccggc ccggcggtag gcccacggca
     5761 gcggctgctc catggcccag accaggagcg ccgacggcag cgacgcttcc tggaagatcg
     5821 tgctgccgaa gagatgcggc acgatcacgc cgaacggccg gtccgtcatc ccggccagga
     5881 acagcggcac cttgttcacg tcctcgacca ccacgtcggg ccgctccgcc ttgagcgccc
     5941 gccgcaccgc gccccgcccg agcagggtga acgagttgcg gttgccggtc cggtggacct
     6001 ccatcccgtc caccatcgcc cgggtctcgc cgccggccca gccggaacag accagccgga
     6061 cgcgatggcc ccgcgccgcc agccgcccga agatctcgtg caggtggatc tccgcgccgc
     6121 ccgactgcgg attcatccgg tcctgccagt tcaccagcag gatgttcaca gccggccgat
     6181 ggaatgggcc acccggtcga gcacgccgtt cacgaacgac ggcgccttgg cgcccccgaa
     6241 ccagtgggcc agctgcaccg cctcgtcgat cgcgaccttg ggcgggacat cgcccttcag
     6301 gagttcgtgc accccgatcc ggaggatgtt ccgctccacc ggcgcgatcc gttcgagccg
     6361 ccagttgtcc gccgcgtcgg aggcgtgccg gtcgagctcg tcccgctcct tgaggaccgc
     6421 gtcggccagc gtctcggcgc cgtcgtacac attgggatcg gggccggtga gccgggccag
     6481 gcgggtcacc gcgtcatcga gcgagccgtt gccgatttcc atcgagtaca ggatctggag
     6541 cgcccgggcc cgggccttcg tctcaggtct gagcatggga ctttcggagc tgggccagcg
     6601 catcggccgt acgaatcgcg gcctcggtgg cctcataccc cttgttgccg gcggcgccgc
     6661 cggcccgcgc cagggcctgg tccatcgtct cggtggtgag caccccgaac gccaccggga
     6721 gctcgtgccg caccgccacc tcggacaagc cgcgcgccgc ttcgccggcc acgaactcga
     6781 agtgggcggt ctcaccccgg accaccgcgc ccagcccgac gatcgcggca tagcggccgg
     6841 tgcccgccgc ggccgcggcg gccccgccca gctcgaaggc gcccggcaac cagacgacat
     6901 cgatctggct ctcggggacg ccggcatcgt ggcagcaggc cagcgctccc tcgaggaggc
     6961 ggccggtcac ccgttcattg tactggctca cgagaatggc cacacgcccg gcaaggcgga
     7021 gctggccctt gaattctggc atccggtcag tgggcgagga gatggccgag cttgtcgcgc
     7081 ttggtgtcga ggtaggcgcg gttctcgtcg ttggggtcgg ccaccagcgg cacccgttcg
     7141 acgatctcga gcccgtaccc ttcgaggccc accagcttgc ggggattgtt ggtcatcacc
     7201 cggatggagg agagacccag gtcgcggaga atctgggcgc cgatgccgta gttgcgcaga
     7261 tcgggcgcga agccgagccg ctggttggcc tgcaccgtgt cgtcgccctc atcctgcaac
     7321 gcgtaggcct tgatcttgtt gtggaggccg atcccccggc cttcctggtc gagatacacg
     7381 atcgccccgc ggcccgcctc ggcgatcagc ttcatcgcct ggtgcagctg ggggccacag
     7441 tcgcaacgct gcgacgcgaa gacgtcgccg gtgaggcact tcgagtgcat ccgcaccagc
     7501 acgtccttgg cgccctcgat ctcgcccttc accagagcga catgctgggc ccggtcgacg
     7561 tcgttggcgt aggcgatgat ccggaactcc ccgaactcgg tgggcaggcg cgcctcggct
     7621 tcccgatgca ccagctgctc gttggcgagc cggtgtgcca ccagctgcgc gatggtgacg
     7681 aaggtgaggc cgtgccgggc ggcaaactcc tcgagctggg gccgccgcga aggcgaaccg
     7741 tcttcgttga ggatctcgca gatcaccccg gccggataga ggccggccag gcgcgcaagg
     7801 tcaaccgcgg cctcggtgtg ccccacccgc tggagcaccc cgccgggccg ggcccggacc
     7861 ggctgaatat gccctggccg gcggagatca cccggcaccg tgctgggatt gatggcgacg
     7921 tggatcgtct tggcccggtc cgaagccgag ataccggtgg tgacgccgtg gcgggacgag
     7981 gcgtcgatgg tgaccgtgaa cgcggtccgc tgcgcctcgg tgttctgggc ctccatctgc
     8041 tgcagcccca gctcctcgca gcgctcgggc atgagcgcga gacagaccca gccacgggcg
     8101 tgggtgatca tgaagttgat cacctcgggc gtgaccagct ccgccgcgca gatcaggtcg
     8161 ccctcattct cccggtcctc gtcgtccgcg acgatgatcg gcttgccgtt ctgcaggtct
     8221 tcgatggcct gggcgatatt tccgaatgtc atggctcgct tcacctaact ccgcttcctc
     8281 ggctcgagga ggctctcgac gtacttggcg atggtgtcgc cctccaggtg gaccgagtcc
     8341 cccggctcga gcgttcccag cgtggtgtgt tcaaaagtaa acggaatgag ggacacctga
     8401 acgattcccg gctcggggat cgcgttcacc gtcaggctca ctccttcgac cgtgatcgat
     8461 ccgagcggga tcgtcacccg ggccacatcc tcgggcaccc cgaggtcgat gagccacgca
     8521 tcgccgtggc gggcggtgcg gagcaccgta ccgacgccat ccacatgccc ctgcaccatg
     8581 tggccaccca gccggtcgcc gatccggagc gcccgctcga ggttcacccg ggtgccgcgg
     8641 gcatactcgc tgaaggtggt gcgctcgagc gaagtgcgga tcacgtgcac ctcgaaccag
     8701 cccttccctt tgcgctcgac ggtgagacag gcgccatcga ccgcgatgct ctcgccggtc
     8761 ttgacgccgc gatagggcgc cccgatccgc agggtgagcc ctttagcgct catccgggcg
     8821 gcccgcacga ccccgatggc ggttacgatg ccggtgaaca tggctctcga tccagcacca
     8881 gcagcgtgtc ctgacccagc gcccggcgct ccaccacttc ccaccgttcc gcctcaacca
     8941 gagtcgttcc agggaggccg gttaccgccg gcacaccggc gtcgccgagc cagaccgggg
     9001 actggatcca gtagtagcgg tccaccagtc cctccttgag gagcgccccg gccagccgac
     9061 cgcccccttc gaccagcaac gagctgatcc cgcgctgccg cagcatcccc agcccctcca
     9121 tcagcgacgt cacccacagc acctccaccc cggcctcttc cagcggggcg atccggccgg
     9181 tgggcccgtg cgaggcggca accagtatgg tcggaatctc ccgcgcgctc cggaccaggc
     9241 caagcgaggc ggagacatct ccctgccggc tgaagaccac ccgcaccggc gggcgccgcg
     9301 gctcgaccgg cccgcgcacc gtaagcgagg cgtcgtcgac ggtggcggtg tgcgccccga
     9361 ccccgatcgc gtcgaacccg gcccggagcc agtgcacata gtcgcgggcc tcgtctcccg
     9421 agatccagcg cgaccggccc gcatgatcgg caatccgggc atccagcgtg gtggccagtt
     9481 tcagggccac gaaggggcgc gcgggctcgc ggtgttcatg aaagaacacc gcgttctggg
     9541 ccctggcttc atcgccccgg agtcccagtg cgacctgaat ccccgcggcc cgcaaccggt
     9601 cagccccgcc acccgccacc gggttggggt cggccgccgc aacgatcact tgagcgacgc
     9661 ccgctgcgat cagcgcctcg gtgcagggcg gctgcttacc gcggtggttg cacggctcga
     9721 gagtcacgac cacggtggct ccgcgcgcgg caccgcctgc cttctggagg gcagccgctt
     9781 cggcatgaag atcgccgtac tccgcgtgcc agccctcgcc gaccacctgg tcgccctgga
     9841 gcaccaccgc cccgaccagc gggttgggcg ccactcggcc ccagccccgc caggccagtt
     9901 cgagggcccg gcccattgcc gcgaagtgat tcacgggctg gaatttacac catccctcgt
     9961 ggccgagaag ggaaccccga aggggagctg taaatgagga tctactggcc cgacggacgg
    10021 ccatcggcgg cgaggacatt ctggcctacg atacggctcc cgctgggact cttcgtcttc
    10081 gtcatactga cacggttacc cgcgctgctg tcgcccaagg cgctcgacga tgagcaggtc
    10141 tatgcggtcg tcgcccggga aatgctccac ggaggccgtc cctacctcga tgcggtcgag
    10201 cgaaagccgc ccctgctctt cctgctctat gagcagatcc tcaagctggg cgatcacgac
    10261 tggttcgcgc tgcacctggt cgccgtgctc tggaccctcg ccacgatggc ggtgctctac
    10321 ctgatcgcgc ggcgcctctt cgaccagact accggctact gggccgcatt cctgtacgcg
    10381 ctcttcgtgg cgtgggccga ttaccggagc ctcgcgctca atggggagct gttgatgaac
    10441 ctccccgcga tggccgccgt cgcggtggcg tttgcccaat caaggtcgcg ctggcggccc
    10501 gagttgctgc tctcgggcgc gctggtcgcc ctggcattcc tgctcaagca gccggccggc
    10561 atcgtggcgc cggccctcgg cctctacctg ctcacaccag cctatcgccg ggaacgccag
    10621 ctccccgcgg gatacccggt cctgcacgcg ggactgctga cgatcggatt cagcaccgtc
    10681 tttgtgctca ccgggctctg gctctggcac gacgggattc tctaccaggc ggtctactgg
    10741 acagtgctgg atcatggtgt gcctcgggga ccgaccacct ggcccttctg gcgcggggcg
    10801 ctcctccggg gagggttctt cgcgctctcc gtactgccgc tgatcctggc gacgctcgaa
    10861 tcggtgcacc ccgggatgcg ggcgaagcgg atctggcgcg ggctcaaggc ggaatacctc
    10921 ggactgctgt tcctgctggg cgggtcgctg atcggggtcg cggcgggagg ccagttcctc
    10981 tatcactact tcctccagct ggtcccaccg ctctgcctgc tggcggcgcc gatcttcagc
    11041 gaggtctggc gccagcacct ccgcccctac ctcgctctcc cttcacggcc aatcctcggc
    11101 gtctggctgg ggctgctgac ggggctgttc ctggtggtgg atgccctggg cgtcgccacc
    11161 cacgacaagc cgggcgaagc ggcgatctat gtgcgggacc actcgaatgt gtccgaccgg
    11221 ctcttcgtgt ggggccaggg cgaccgtttc accggcttct atctcgacgc cgagcgccgc
    11281 cccgcgaccc gctatatcgc gacgtacccg ctgacaggcc acatcttcgg cgtgtgggac
    11341 cccggggtga acacttcgca ccggatcgtg gccggcgcct gggattcact ccgggtcgac
    11401 ttcgagcgcc atccgccgcg tttcatcatc aacaccgacg ggatcttcca gccgccggcg
    11461 tacccgatca aggactacac ctttctccag ggctacctga cgaggtacta ccgcgaggtg
    11521 tatcgcgcgc gggatggcgt ggtgtacgag cgggtcagcg cgctccggca aagctcgtag
    11581 tagggcgagg tcctcaactg cttaccacag atgagcaccg atgttgaccg cgatgcaaat
    11641 cgggtggcac gttgccagtc atgaaacagg attcgggaac gtctggttga ctacttgatg
    11701 tccgcagggc ggagataaga ggtcaaccga gatcccggaa tcccgttccg atcggtgttc
    11761 atctgtggta ggcagttccc aaatggtgcg aacctagaat ccgagcgcga cgcccacccc
    11821 gccgtagaac tgtccccctg ccggatcgat ccgctcgaag gtggtaagca cgccctcgtc
    11881 cttccccacc aggaatcccc cttcgcccca gagcttgagc ggcccgacga tcagggatgc
    11941 gttgagcagg gtgttgatgc gggaggtgct gagcgccagg gcgatgctcg agtcggtgcc
    12001 cgcgaccgga tcgtggaagg ccactcgccc tttccccttg atcaggtcga tgccgccgcc
    12061 gccagtgagc tcgagcggcc ccaggtgccc gccgacgagc aggcgggcgt tgatcacgga
    12121 gagcgtggtc gaggcggaga gctggtcgcc gttcgcgagg ttgccgaaga tgattgccgg
    12181 catgtctcgc ttcatcacgt tgagcgacac cgtcggtttc cggcccgcca tggccatcgc
    12241 ggcccgcagg ccgaagccga gtcccagggc gaggtcgccg atgcggcggg cgttgggatc
    12301 gaggcgatac cggctcgacg cgccgatcgg cacgatcacc gcggagccga ggagatcgac
    12361 cgaggcggtg ccgaccggga gcttcctgct gaagatgccg acatcgagat cgagccgcgg
    12421 catcgggatc aggagccgct tgtcggccga cacggtatcg ctggtaccgt cgaacgaggc
    12481 atcggggatc gtgagctgga ccagcccgat gcggcccgcg agccggaagc ggccgaactg
    12541 accgagggcc gacgcggtac cgggcaccgg attgccgcca ccgaccagcg cggcttcgac
    12601 cgggagaaag agcaccagcg catcggcgcc ggcctgacag at
//
LOCUS       DATIFF010000374         1259 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1434291, whole genome shotgun sequence.
ACCESSION   DATIFF010000374 DATIFF010000000
VERSION     DATIFF010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1259
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1434291"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1259
                     /locus_tag="VLD58_05680"
     CDS             <1..>1259
                     /locus_tag="VLD58_05680"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSB53823.1"
                     /translation="DGVYRHIRQIAIPRWDATGELEGFIGVDVDVTELRERSALLEEA
                     EARYRQIADTVPVIVWMDDVHHNLTYQNLTADAYSGRTITEEHGTSWFDGIHPEDRDR
                     VMAAYQSTTTHPVPYQHMYRLRRYDGVYRWFIEIGVPRHADDGEFIGFTGVDVDVDDL
                     MRASTLLEQAEARYRHFIEQSSEGIWRLEHDQPVPTTIPEEEQIRLWYQHAYLAECNL
                     SMAKMYGYSTPEEMQGARLADIMPADDSTNHEMLRAFIRSGYRLVGVESHERDRHGRR
                     KYFLNSLVGVVENGCLVRSWGTQQDITERRILEEEARQSRKMESAGRLAGGIAHDFNN
                     LLTAILGTSELLLTTLNRNDPAREDVEEIKRAATRAANLTRQLLAFSRRQVLQPRILE
                     LDSLVHGVETLLRRLIGEHISLTVQSAP"
BASE COUNT          235 a          444 c          412 g          168 t
ORIGIN      
        1 gacggcgtct accgccacat ccgccagatc gcgattccgc gctgggacgc caccggcgag
       61 ctcgaggggt tcatcggggt ggacgtcgac gtcaccgaac tccgggagcg gagcgcgctg
      121 ctcgaggagg cggaggcccg ctaccgccag atcgccgaca ccgtgccggt gatcgtgtgg
      181 atggacgacg tccaccacaa cctgacctac cagaacctca ccgccgacgc ctactcgggc
      241 cgcaccatca ccgaggaaca cgggaccagc tggttcgacg ggatccaccc ggaggaccgc
      301 gaccgggtca tggccgcgta ccagtccacc accacccacc cggtccccta tcagcacatg
      361 taccggctgc ggcgctacga cggggtgtac cgctggttca tcgagatcgg ggtaccgcgc
      421 cacgccgacg acggcgagtt catcggcttc accggcgtcg atgtcgacgt ggacgacctg
      481 atgcgggcga gcacgctgct ggaacaggcc gaggcgcgct accgccactt catcgagcag
      541 agctcggagg gaatctggcg gctggagcac gaccagccgg tccccaccac catccccgag
      601 gaggagcaga tccggctctg gtaccagcac gcctacctcg ccgagtgcaa tctcagcatg
      661 gcgaagatgt acggctacag cacgccggaa gagatgcagg gcgcgcggct ggccgacatc
      721 atgccggccg acgacagcac caatcacgag atgctccgcg ccttcatccg ctcggggtac
      781 cgcctggtgg gggtggagag ccacgagcgc gaccgtcacg gccggcggaa gtacttcctc
      841 aacagtctcg tgggggtggt ggagaacgga tgcctggtgc ggagctgggg tacccagcag
      901 gacatcaccg agcgccggat tctcgaggag gaagcgcgcc agtcacgcaa gatggaatcg
      961 gccggccggc tggcgggcgg gattgcgcac gacttcaaca acctgctcac cgccatcctc
     1021 ggtaccagcg agctcctgct caccaccctc aaccggaacg atccggcgcg ggaggatgtc
     1081 gaagagatca agcgggccgc gacccgggcg gccaatctca cccgccagct cctcgccttc
     1141 agccggcgcc aggtgctcca gccgcggatc ctcgagctcg acagcctggt ccacggggtc
     1201 gagaccctgc tccgccgcct gatcggcgag cacatctcgc tcaccgtgca gagcgcgcc
//
LOCUS       DATIFF010000375         2717 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_818407, whole genome shotgun sequence.
ACCESSION   DATIFF010000375 DATIFF010000000
VERSION     DATIFF010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2717
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_818407"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..316)
                     /locus_tag="VLD58_05685"
     CDS             complement(<1..316)
                     /locus_tag="VLD58_05685"
                     /inference="COORDINATES: protein motif:HMM:NF013298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HSB53824.1"
                     /translation="MALRVAVIGAAGYVGGELLRLLIQHPEVSDIVATSRSKAGVPVG
                     EVHPALAPLTDVRFSGSAPAEAARQADVVFLALEHGESSKVAEEVLAAGPGLVVDLAA
                     DFR"
     gene            complement(323..1432)
                     /locus_tag="VLD58_05690"
     CDS             complement(323..1432)
                     /locus_tag="VLD58_05690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53825.1"
                     /translation="MVKTTRIRLDRISSSTRNAQLSSEVIIGDEIVAAEGYVLAVRIL
                     HDKPSYNTVEDRTGRMVSLRAGDILAGTLGHRRALRGYAGVVPSHIAVGDTIEVLNLG
                     GILGKCTSSNPENGMPFKAEVLGAILSFPELGDRIGRPAHIRDHAVPAADRLESQVPV
                     VYVAGTCMNAGKTVAATELVRGLSRAGLKVAATKLTGVSLMRDSLSMLDAGAITALTF
                     NDIGIATTRAGLTVTAAKGIMNRLATAKPDVIVAELGDGILGEYGVQDILRDPELTAV
                     GAAYVMAAPDPVGCWGAVTLMRDLFNLPVTVLTGPATDNEVGRDYVKAELQLPAHNAM
                     RDAESLVKIVLAALDSRPQPTPVGRASSAQLTAVA"
     gene            complement(1532..>2717)
                     /locus_tag="VLD58_05695"
     CDS             complement(1532..>2717)
                     /locus_tag="VLD58_05695"
                     /inference="COORDINATES: protein motif:HMM:NF044952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="argininosuccinate synthase domain-containing
                     protein"
                     /protein_id="HSB53826.1"
                     /translation="QMKTLVLAFSGGLDTSFCVPHLAGLGWAVHTVYVDTGGATPADL
                     AAIEKQAHAVGAVAHHTLDARQAVFDRFVRYLIQGNVLRGEVYPLSVSAERTQQAISV
                     IEAARKVGATAVAHGSTGTGNDQVRFDIAFRVLAPDLEIITPIRELGLKREDAIAYLE
                     QRKLPVPPKAGAYSINRGLWGTTWGGGWTHDTWAGPPAELLDPPGDAPAARDIVLGWR
                     GGVPVSLDGKTLTGPDLIRTIGDLGEAYGFGRNIHVGETALGIKGRIGFEAGAALLLI
                     AAHRELEKLVLTKWQSFWKDQLSRFYGDRLHEGHYFDPALRDIEALITSSQQRVVGET
                     RVHLAPGRFQVTGTRSPFSMMDKSVATYGEENRLWTGEEARAFSRVSAIPELLAERAG
                     RK"
BASE COUNT          414 a          950 c          934 g          419 t
ORIGIN      
        1 cccggaagtc ggccgcgaga tccaccacca gtcccggccc ggcggccagg acctcctcgg
       61 ccaccttcga gctttccccg tgctccaggg ccaggaacac cacgtccgcc tgccgcgccg
      121 cctcggccgg cgccgagccg gagaagcgca cgtccgtgag cggggcaagc gccggatgga
      181 cctcgcccac cggtacccct gccttgctcc ggctggtggc gacgatgtcg ctcacctcgg
      241 gatgctggat gagcagccga agcagctcgc cgccgacata gccggcggcg ccgatcaccg
      301 cgacgcgaag ggccatggag ccttacgcga ccgccgtcag ctgcgccgag gaggcgcgac
      361 ccactggagt gggctggggg cgcgagtcga gcgccgccag cacgatcttc accaggctct
      421 cggcatcgcg catggcgttg tgggccggga gttggagctc ggccttcaca tagtcgcggc
      481 cgacctcgtt gtcggtggcg gggccggtga ggacagtgac cggaagattg aagagatcgc
      541 gcatcagggt caccgcgccc cagcagccga ccggatcggg ggccgccatg acgtaggccg
      601 cgccgacagc ggtgagttcc ggatcgcgga ggatgtcctg caccccgtac tcgcccagga
      661 tgccgtcgcc cagctcggct acgatcacgt cgggcttggc ggtggcgagc cggttcatga
      721 tgcccttggc cgcggtgacc gtgaggcccg cgcgggtagt ggcaatgccg atgtcgttga
      781 aggtgagcgc ggtgatggcg ccggcatcga gcatcgagag cgagtcacgc atgagcgaca
      841 cgccggtgag cttggtcgcc gccaccttga ggccggcgcg ggacagcccg cgcaccagct
      901 cagtcgctgc gactgtcttg ccggcgttca tgcaggtgcc cgccacgtac accaccggca
      961 cctgcgactc gagccggtcg gcggcaggta ccgcatgatc gcggatgtgg gccggccggc
     1021 cgatccggtc gcccagctcg ggaaagctca ggatcgcccc cagcacttcc gccttgaacg
     1081 gcatgccgtt ctcggggttg ctcgaggtgc acttgccgag aatgccgccg aggttgagca
     1141 cctcgatcgt gtcgcccacc gcgatgtgtg acggcaccac cccggcataa ccccggagcg
     1201 cccgccggtg tcccagcgtg cccgcgagga tatcgcccgc gcggagggac accattcgcc
     1261 cggtccggtc ctccaccgtg ttgtaactcg gcttgtcgtg caggatccgc acggccagca
     1321 catacccctc ggcggcgacg atctcgtcac cgataatcac ctcggagctg agctgcgcat
     1381 tccgggtgct ggaagagatg cggtcgagcc gaatccgtgt ggtctttacc atgtgtgcga
     1441 acctccattc ttgatcaaga ggggccggag gccggagtct ggcggaggcc ggagtgacat
     1501 ctcccgcctc cgccggcctc cagcctccgg cctacttcct gccagctctc tccgccaaca
     1561 gctccgggat cgcactcacc cgcgagaacg ccctggcctc ttctccggtc cagagccggt
     1621 tttcctcccc gtacgtcgcc acgctcttgt ccatcatcga gaacgggctc cgggtgccag
     1681 tgacctggaa acgccccggc gcgaggtgca cccgcgtctc gccgacaacc cgctgctggc
     1741 tcgaggtgat cagcgcctcg atatcccgga gggccggatc gaagtagtga ccctcatgca
     1801 gccggtcgcc atagaagcgg gagagttggt ccttccagaa gctctgccac ttggtgagca
     1861 ccagcttctc gagctcgcgg tgggcagcga tgaggagcag cgccgcgccc gcctcgaacc
     1921 cgatccgccc cttgatgccg agggcggtct cgccgacgtg gatgttgcgg ccgaaaccgt
     1981 aagcctcgcc caggtcgccg atggtccgga tcaggtccgg gccggtgagc gtcttcccgt
     2041 cgagcgacac cggcacgccg ccccgccacc ccagcacgat gtcgcgcgcc gcgggtgcgt
     2101 ccccgggggg atcgagcagc tcggccgggg gaccggccca ggtgtcgtgg gtccagccgc
     2161 cgccccaggt ggtgccccag aggccgcgat tgatagaata ggcaccggcc ttgggcggca
     2221 ccgggagctt ccgctgctcg aggtaagcga tcgcgtcttc ccgcttgaga ccgagctcgc
     2281 ggataggggt gatgatctcg agatcgggcg ccagcacccg gaaggcgatg tcgaaccgca
     2341 cctggtcgtt gccggtgccg gtcgagccgt gggccaccgc ggtggcgccg accttccggg
     2401 ccgcttcgat caccgagatc gcctgctggg tccgctcggc cgagaccgac agcgggtaga
     2461 cctcgccccg gagcacgttc ccctggatca gatagcgcac gaaccggtcg aacaccgcct
     2521 ggcgggcatc gagggtgtgg tgcgcgaccg cgcccaccgc gtgagcctgt ttctctatgg
     2581 cggccaggtc ggccggggtg gcgccgccgg tgtcgacgta gacggtgtgc actgcccagc
     2641 cgagcccggc gaggtggggc acgcagaacg aggtatccag tccgcccgag aaggcgagca
     2701 cgagtgtctt catttgg
//
LOCUS       DATIFF010000376         1182 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_973105, whole genome shotgun sequence.
ACCESSION   DATIFF010000376 DATIFF010000000
VERSION     DATIFF010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_973105"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            175..>1182
                     /locus_tag="VLD58_05700"
     CDS             175..>1182
                     /locus_tag="VLD58_05700"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB53827.1"
                     /translation="MKALLQDLRYACRLLFRSPGFTLLAALTLALGIGANAAIFSVAS
                     SVLLKPLPYKDSGRLMIVYSQFPTMGFDRFWVDPMEFTEYGRWNRSFESLGAYVTGEV
                     NVSGRDEPVRATAARATAGLFTALGVRPERGHFYTPAEDLPNVEKTVVLSDGLWRRAF
                     GADPGILGRRIKVDGADRTVIGVMPPGFTVGNERIEAWIPLALDPAKPGNHGNHYLYL
                     VGRLKPDVSLSLARQEMNGLLARWKKEIPNDHTPDPERHRMVIQPLLEDLVGSIRPKI
                     QLLMGAVGLVLLIACVNVANLLLARSTVRMKEIAIRTALGAGRGRIVRQMLAESLLLS
                     AA"
BASE COUNT          186 a          401 c          406 g          189 t
ORIGIN      
        1 cggcgccgga ggattttgag cgggtgctgg cgcggttgag aagaacacgg acgagcacgg
       61 actgacaccg acgaacaccg tgctcgtccg tgaaggtccg tgtttgtccg tgctctttcc
      121 tgcaaccaac taccccagtc atcgtactag gggagaaagg gaggtttccc cgcgatgaag
      181 gctctgctcc aggatctccg ttacgcctgc cggctgctgt tccgcagccc cggattcacc
      241 ctgctcgcgg cgctcacgct ggcgctgggg atcggcgcca acgccgccat cttcagcgtg
      301 gcgagctccg tgctgctcaa gccgctcccc tacaaggatt ccggccggct gatgatcgtc
      361 tacagccagt tccccaccat gggcttcgac cgcttctggg tcgatcccat ggaattcacc
      421 gagtacggcc gctggaaccg gagcttcgag agcctgggcg cctacgtgac cggggaggtc
      481 aacgtctcgg ggcgggacga gccggtgcgg gccaccgcgg cccgcgccac cgcggggctg
      541 ttcacggccc tgggggtgcg gcccgagcgg gggcacttct acacgcccgc cgaggacctg
      601 cccaacgtcg agaagacggt ggtgctctcc gacggcctct ggcggcgggc gttcggcgcc
      661 gacccgggca tcctcggccg gcggatcaag gtggacggcg cggaccgcac cgtgatcggg
      721 gtcatgccgc cgggcttcac cgtcggcaac gagcgcatcg aggcctggat cccgctcgcc
      781 ctcgatccgg caaagccggg caatcacggc aaccactacc tctatctcgt ggggcgcctg
      841 aagccggacg tctcgctgag cctggcgcgg caggagatga acggcctgct cgcccgctgg
      901 aagaaggaga tcccgaacga tcacacgccc gaccccgagc gccaccgcat ggtgatccag
      961 ccgctgctcg aggatctggt ggggagcatc cggccgaaga tccagctcct gatgggcgcc
     1021 gtcgggctgg tgctgctgat cgcctgcgtc aacgtggcca acctgctgct ggcgcgctcg
     1081 acggtgcgga tgaaggagat cgcgatccgg acggcgcttg gcgccggaag ggggcgcatt
     1141 gtccgccaaa tgctggccga gagcctgctg ctatccgccg cg
//
LOCUS       DATIFF010000377         2217 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_50439, whole genome shotgun sequence.
ACCESSION   DATIFF010000377 DATIFF010000000
VERSION     DATIFF010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50439"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(194..652)
                     /locus_tag="VLD58_05705"
     CDS             complement(194..652)
                     /locus_tag="VLD58_05705"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSB53828.1"
                     /translation="MKPRFSYAKAAPKVFEAMDALDTYPFTLDKPLLDLVRFRASQIN
                     GCAYCLDMHWKDLVAAGENAQRLYSLEAWRECPWYSARERAALAWTEAVTLVSQGQVP
                     DAAYEEARARFDERELCELTLAIAAINAWNRLSIASRLTPGTYQPAVAAG"
     gene            complement(690..1088)
                     /locus_tag="VLD58_05710"
     CDS             complement(690..1088)
                     /locus_tag="VLD58_05710"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSB53829.1"
                     /translation="MRIRMLLALLLLVPVLLAAGDPAAVRLVLTQRLPLLRGDRLQVQ
                     VVEVTYPPGGESEPHSHPCAVVGYVADGAFHSQVDGGPDTVYRAGQSFYEAPNAVHRI
                     SANASADRPVRFTATFVCDSTAALTVPAGR"
     gene            1179..>2217
                     /locus_tag="VLD58_05715"
     CDS             1179..>2217
                     /locus_tag="VLD58_05715"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HSB53830.1"
                     /translation="MTKRASALPLTLPLRPAGLPAHRWLYNALQQSILGGALRPGTRL
                     PATRELAAEYRLARGTIVAAFDQLRAEGYLEGRTGSGTFVARELPEMIRRAGAASRGS
                     EARAPNRRLSAFARRVRPFPHQGPRPMRAFRANQPALDLFPTTLWAQVASRRARHATT
                     QHLEGDPPLGYRPLREAVADYLITSRGVRCTADQVAIVSGVQEALSLTARLVLDPGDK
                     VVMENPGYIGAALVFQALGAHIANARVDGQGLDLRAADRDAKLVYVTPAHQFPLGMSM
                     TLARRLELLATARAHGILIFEDDYDSEYRYAGKPLPALQGLDQHGVVLFAGSFSKVLF
                     PSLRLGYLVVPP"
BASE COUNT          328 a          817 c          728 g          344 t
ORIGIN      
        1 ggctccgcgg agacacacgc cggagtgcgc gcagatattg gggtcgaacg tgacgaccaa
       61 ctcgggcgtg gcgtacacct ggaggcgctt ggtcatgccg ggctccccgg agagggccgc
      121 gcgctccggg acggtgagtc atccggaggc gcgccgcgat ctctctaaca tagagccgcc
      181 gtccagcctc ggcttacccc gccgccaccg ccggctggta ggtccccggg gtcaggcgcg
      241 atgcgatcga cagccggttc caggcgttga tcgccgcgat cgcgagggtg agctcgcaca
      301 gctcgcgttc gtcgaagcgg gcccgcgcct cctcgtaggc cgcatcgggc acctggccct
      361 ggctcaccag cgtcaccgcc tcggtccacg ccagggccgc gcgctcccgg gcgctgtacc
      421 agggacactc cctccacgcc tcgagcgaat agagccgctg cgcattctca cccgccgcaa
      481 ccaggtcctt ccagtgcatg tcgaggcagt aggcgcagcc gttgatctgg gacgcccgga
      541 aacgcaccag gtcgagcagc ggcttgtcga gcgtgaaggg gtaggtatcg agggcgtcca
      601 ttgcctcgaa caccttcggg gctgccttgg cgtagctgaa acggggcttc atgcgactct
      661 gctccatgca atgagaggga agaactggct cagcgcccgg cgggtaccgt cagcgcggcc
      721 gtgctgtcac agacgaacgt tgcggtgaac cgcaccggcc ggtccgcgct cgcgttggcc
      781 gagatccggt gcaccgcgtt gggcgcctcg tagaagctct ggcccgcgcg atacacggtg
      841 tccggcccgc cgtcgacctg gctgtggaag gcgccgtccg ccacgtagcc gacgacggcg
      901 cagggatggc tgtgcggctc cgactcccct cccggtgggt aggtgacctc cacgacctgc
      961 acctgcagcc ggtcaccccg aagcagcggg agacgctggg tgagcaccaa ccgtacggcg
     1021 gccggatcgc ctgcggcgag cagcaccggg accagcagca ggagagcgag cagcattcgg
     1081 atccgcatcg ggacctccag gattgtcggc tcccaaggta gaattgagtg gacctatgca
     1141 gtagatccat ttagcgatta ttgactggac cactctttgt gaccaaacgc gcctccgccc
     1201 ttcccctgac gctcccgcta cgcccggccg gcctccccgc ccaccgctgg ctctacaacg
     1261 cgctccagca gtcgatcctg gggggcgcgc ttcgtcccgg cacccggctt cccgccaccc
     1321 gggaactcgc cgccgagtac cgccttgccc gcggcaccat cgtcgccgcg ttcgatcagc
     1381 tccgggccga ggggtacctg gaaggccgca ccgggtcggg gaccttcgtg gcgcgcgagc
     1441 tgccggaaat gatccgccgc gcgggcgcgg cttcgcgggg gagtgaagcg cgcgcgccga
     1501 accgtcggct ctcggccttc gcgcggcggg tccgtccgtt cccccaccag ggtccgcggc
     1561 ccatgcgcgc ctttcgcgcc aatcaaccgg cgctggatct ctttcccacc actctctggg
     1621 cccaggtcgc ctcccggcgg gcccgccacg ccaccaccca gcacctcgag ggcgatcccc
     1681 cgctgggata ccgtccgctc cgggaagccg tcgccgacta cctcatcacc tcgcgcggtg
     1741 tacgctgcac cgccgatcag gtcgccatcg tctcgggggt gcaggaggcg ctcagcctca
     1801 ccgcccgtct ggtcctcgat ccgggcgaca aggtggtgat ggagaatccg ggctacatcg
     1861 gcgccgccct ggtgttccag gcactgggcg cccacatcgc gaacgcgcgg gtggacgggc
     1921 agggactcga tctccgcgcc gccgatcgcg acgcaaaact ggtgtacgtc acccccgccc
     1981 atcagttccc gctcgggatg agcatgaccc tcgcccgccg gctggagctc ctggccaccg
     2041 cccgcgccca cggtatcctg attttcgagg acgactacga cagtgagtac cgctacgccg
     2101 gcaagccgct tcccgcgctg cagggactcg accagcacgg ggtggtgctc ttcgccggga
     2161 gcttcagcaa ggtcctcttc ccgtcgctcc ggctcgggta cctcgtggtc cctcccg
//
LOCUS       DATIFF010000378         1378 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2050845, whole genome shotgun sequence.
ACCESSION   DATIFF010000378 DATIFF010000000
VERSION     DATIFF010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1378
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2050845"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1378)
                     /locus_tag="VLD58_05720"
     CDS             complement(<1..>1378)
                     /locus_tag="VLD58_05720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53831.1"
                     /translation="VGGACVSEVAVIDGRSQRYALGASVLGLMQDFIFRETGLAERLE
                     TFVPGHAKRVYFPDPKASAWIHRDPIALERELRSKWNERGDVAGFRHDEARVVEFLQE
                     GYRSGTPPDLAGARERLGETLTRLWITGSAAELLHHYFTADYTRIYMGMTVTESGPVS
                     LHEPYSAFTLPLMDSGSVFDGYYGFVRDGIWRVTEELARINREVGVDIRVGCRVERVD
                     PDAGALQYAEAGGSRTLPFDRLVFATDPLAAARLVGDESFTGGIEAQRFLGSSGKLTL
                     MFRNPVRWKEGTAAADGDTAFRFLFAVESLEAFEHATLRATEGEVDYEPGFIQVYCEG
                     AAMRQLGLVEPFDRLTLFFKNLALDRQGEALPDVVAAVQEQLFAKIENPEDLAWHRLL
                     TPRDLQRLFLFPGGNLDHSMLVGGQTFFDRQYASDPARQFYRFGRWPNLAYCGAGAYP
                     CGSIAGTPG"
BASE COUNT          230 a          472 c          465 g          211 t
ORIGIN      
        1 agcccggtgt cccggcgatc gaaccgcagg gatacgcccc ggcgccgcag tacgccaggt
       61 tgggccaacg cccgaagcgg tagaactgcc gcgccggatc ggaagcgtat tgccggtcga
      121 agaaagtctg tccgcccacc agcatgctgt gatccaggtt gccgccgggg aagagaaaga
      181 gccgttgcag gtccctgggg gtgagcagcc ggtgccaggc gaggtcttcc gggttctcga
      241 tcttggcgaa cagctgctcc tggaccgccg ccacgacgtc ggggagcgct tctccctgcc
      301 tatcgagggc caggttcttg aagaacagcg tcaaccggtc gaagggttcg accaggccga
      361 gctgtcgcat cgccgcccct tcgcaataga cctggatgaa acccggctcg tagtccacct
      421 cgccctcggt cgcccggagg gtggcgtgct cgaaggcctc gagggactcg accgcgaaca
      481 ggaagcgaaa ggcggtgtcg ccatccgccg cggcggtgcc ttccttccag cgcaccggat
      541 tccggaacat cagggtgagt ttgccgctgg agccgaggaa tcgttgcgcc tcgatgccgc
      601 cggtgaacga ctcgtccccg accaggcggg ccgcggccag cgggtcggtg gcgaagacca
      661 gccggtcgaa ggggagggtg cgactgccgc cggcttcggc atactgcagc gctccggcat
      721 ccggatccac ccgctcgacc cggcacccca cgcggatgtc gaccccgacc tcccgattga
      781 ttcgggcgag ttcctcggtc acccgccaga tcccgtccct gacgaagcca taatagccgt
      841 cgaagaccga tccggaatcc atcagcggca gggtgaaggc ggagtacggc tcgtgcagcg
      901 ataccggccc gctctccgtc accgtcatcc ccatgtagat ccgggtgtag tcggcggtga
      961 agtagtggtg gagcagctcg gcggcgctgc cggtgatcca caaccgggtg agggtctcgc
     1021 ccagccgctc gcgggcgccg gctagatcgg gcggtgtgcc gctgcggtac ccctcctgca
     1081 ggaactcgac gactcgcgct tcatcatgac ggaacccggc gacgtcgccg cgctcattcc
     1141 acttgctgcg cagctcccgc tccagcgcga tcgggtcgcg gtgaatccag gcgctcgcct
     1201 tggggtcggg gaagtacacc cgcttggcgt gccccggcac aaaggtctcg agccgctcgg
     1261 cgagcccggt ctcccggaag atgaagtcct gcatgagtcc gagcaccgac gcgccgagcg
     1321 cgtagcgctg ggatcgaccg tcgatcaccg ccacctcgga gacgcaggcg ccgccgac
//
LOCUS       DATIFF010000379         3608 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1588191, whole genome shotgun sequence.
ACCESSION   DATIFF010000379 DATIFF010000000
VERSION     DATIFF010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3608
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1588191"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1092
                     /locus_tag="VLD58_05725"
     CDS             <1..1092
                     /locus_tag="VLD58_05725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA 5TM domain-containing
                     protein"
                     /protein_id="HSB53832.1"
                     /translation="PVFAGKLFPFCFITIACGAISGFHALVASGTTPKMVRREEDARL
                     IGYGGMLMESFVAVMAICAASVLDPGVYFAINVPLAKLGGNAVAAAETIRGWGFMVTP
                     EQMDGLARQVGEATLLGRTGGAPSLAVGMATLFSGAFGQHLLALWYHFAIMFEALFIL
                     TTLDTGTRVGRFMLQELAGHVWAPMGRTSWYPSIVLSSLLVVLSWGYFLVQGLLDPLG
                     GINSLWPLFGISNQLLAAVALCVGTTIIIKAGKARYAWATLAPLAWLLVVTLTASYQK
                     VFSPERRIGFLADAAALRADIAAGTMEAARGARLIFNNQLNAVVASIFVVIVLAVVIS
                     SCREWWLILAGRKAPRAAEAPIVESAYAG"
     gene            1082..1300
                     /locus_tag="VLD58_05730"
     CDS             1082..1300
                     /locus_tag="VLD58_05730"
                     /inference="COORDINATES: protein motif:HMM:NF016234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HSB53833.1"
                     /translation="MPGEAAKRRGGKAASILALILVTVRRIAGMPDYAAYVEHLRACH
                     PDLPVPTEREYFTAYTETRYGAGASRCC"
     gene            1388..1936
                     /locus_tag="VLD58_05735"
     CDS             1388..1936
                     /locus_tag="VLD58_05735"
                     /inference="COORDINATES: protein motif:HMM:NF016270.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HSB53834.1"
                     /translation="MKRLIGWFLNGLIFTAPAALTIYFVWVTFTTVDGWLRIPIPGLG
                     FLATLGLITLVGFLASNFLARRVLEWIDNLIEALPGVRLLYSGIKDITGAFVGEKKRF
                     SQPVLVTLDPVAGSKAIGFLTQDSLTELGMADHVTVYLPFSYSFAGQVLLFPRDRVVP
                     LAASSARVMTFVVSGGVAEVSK"
     gene            complement(2013..2900)
                     /locus_tag="VLD58_05740"
     CDS             complement(2013..2900)
                     /locus_tag="VLD58_05740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53835.1"
                     /translation="MSRAARVGAVVSLLLLATTTLGAQVQIRLGDSSHVTYSEIHEAL
                     RLGSPEADSVRQILEARTSRSLWPLVRKAVEGQIDWNTGLLALNRIAELREARSADSV
                     MRWRRRIVNQEIPPPPATDLNDLLPGLRAVQLELMRKRVGDLGVLKDLLPRIPDGHYD
                     LGDAWVFGRLGSGAADSLAARFLGTTDQPLRIRYLTLLSFSQDTSLIPLFQRIYVAPD
                     SFGLPLRMGTRASDGLLWIGTRRSLLALLDARAAARARGTYADPKLNHADLDFLGSDS
                     SAAVSRTGRWVAEWVEVLK"
     gene            complement(2897..>3608)
                     /locus_tag="VLD58_05745"
     CDS             complement(2897..>3608)
                     /locus_tag="VLD58_05745"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSB53836.1"
                     /translation="GALLAWWLLRHSVDVRQVLTWSIVPGVIAGLVLLVVLRSAPVRP
                     RELAANLADASGRVFWGPVLALAGMVLLRLPETLLLLRLQDLGVAVATIPLVWAGLHV
                     VRSFVSYPGGWLVDRVGPRGTVALGGLVFAGLGALLGLDLSIGLAITVFLGLGLVAGL
                     TESAERTLVSRLAPKRIGRGFGVYHAVTGLAALPAAAGFGLLYAKLGGGVAAHVSAVG
                     MLVVTALWLVAAPRRVTQ"
BASE COUNT          568 a         1287 c         1172 g          581 t
ORIGIN      
        1 ccggtcttcg ccgggaagct cttccccttc tgcttcatca cgatcgcctg cggcgcgatc
       61 agcgggttcc acgccctggt ggcgtccggc accacgccca agatggtgcg gcgcgaggaa
      121 gacgcccgcc tcatcggcta cggcggcatg ctgatggagt cgttcgtggc agtgatggcg
      181 atctgtgcgg cgtcggtgct cgatcccggg gtctacttcg ccatcaatgt gccgctcgcc
      241 aagctgggcg ggaacgcggt cgcggccgcc gagaccatcc ggggttgggg attcatggtg
      301 acgccggagc agatggacgg cctcgcccgc caggtgggcg aagccaccct gctcggccgc
      361 accggcggcg ccccgagcct ggcggtcggc atggcgacac tcttcagcgg cgccttcggc
      421 cagcacctgc tggcgctctg gtaccacttc gccatcatgt tcgaggcgtt gttcatcctg
      481 accacgctcg acaccgggac cagggtcggc cggttcatgc tgcaggagct ggccggccac
      541 gtctgggcgc cgatgggccg cacctcgtgg tatcccagca tcgtgctctc atcgctgctg
      601 gtggtgctga gctggggtta cttcctggtg cagggtctgc tcgacccgct gggcggaatc
      661 aacagcctct ggccgctctt cgggatcagc aaccagctgc tggccgcggt ggccctctgc
      721 gtgggcacca cgatcatcat caaggccggg aaggcgcgtt acgcctgggc cacgctggcg
      781 ccgctggcct ggctcctggt agtgaccctc accgcgagct atcagaaggt cttctcgccc
      841 gagcggcgga tcgggttcct ggccgatgcc gccgcgctcc gcgctgacat cgcggccggc
      901 accatggagg ccgcgcgggg cgcccggctc atcttcaaca atcagctcaa cgcggtggtc
      961 gcgagcatct tcgtggtgat cgtgctggcg gtggtgattt cgtcctgccg ggagtggtgg
     1021 ctgatcctgg cgggccgcaa ggccccgcgg gcggccgagg ccccgatcgt ggagtcggcg
     1081 tatgccgggt gaggcggcaa agcggcgtgg cggcaaggcg gccagcattc tggcgttgat
     1141 tctggtgacg gttcgacgca tcgctggcat gcccgactac gccgcctacg tcgaacatct
     1201 gcgcgcctgt caccctgacc tgccggtgcc cactgagcga gagtatttca cggcatacac
     1261 cgaaactcgc tacggcgcag gcgcttcacg ctgctgttga tgtgaccgac ccctggacct
     1321 cgagacccct agacctctag acctctcgac cgctcgacct ccctcgctcc cccgacccgg
     1381 tgtctcaatg aagcgcctca tcggctggtt cctgaacggt ctcatcttca ccgccccggc
     1441 agccctcacg atctacttcg tgtgggtgac cttcaccacg gtggacgggt ggctccggat
     1501 ccctatccct ggcctgggtt tcctcgcgac cctcggactc atcaccctgg tggggttcct
     1561 ggcctcgaac ttcctggccc ggcgggtgct cgagtggatc gacaacctga tcgaggcgct
     1621 ccccggagtc cgcctgctct acagtgggat caaggacatc accggcgcgt tcgtgggtga
     1681 gaagaagcgc ttctcccagc ccgtgctggt gacactcgat ccggtggcgg gctccaaggc
     1741 gatcggcttc ctgacccagg actcgctcac cgagctcggc atggccgatc acgtcaccgt
     1801 gtacctgccc ttctcctaca gcttcgccgg acaggtgctg ctcttcccgc gcgaccgggt
     1861 ggtgccgctc gcggcctcga gcgccagggt gatgaccttt gtggtgtcgg ggggagtggc
     1921 ggaagtgagc aagtagtcga gaggtcgaga ggtcaagcgg tcgagaggtc gggccttgga
     1981 gctctggacc tctagacctc tagaccccaa gcctacttca acacctccac ccattccgcc
     2041 acccaccgcc ccgtccggct caccgcggcg ctgctgtcgc tccccagaaa atccaggtcg
     2101 gcatgattga gcttgggatc ggcataggtg ccgcgggccc gcgctgccgc tctcgcgtcg
     2161 agcagcgcca ggagactccg ccgagtgccg atccagagca ggccatcgga ggcgcgagtg
     2221 cccatgcgga gcggcagccc gaagctgtcg ggcgccacgt agatccgctg gaacaagggg
     2281 atgagtgagg tgtcctgcga gaacgagagc agcgtgagat agcggatccg aagcggctgg
     2341 tccgtcgttc ccaggaagcg cgccgcgaga ctgtccgcgg cgcccgagcc cagccggccg
     2401 aagacccagg catcacccag gtcgtagtgt ccgtccggaa tccggggcag cagatccttg
     2461 agcacgccga gatcgcccac ccgcttccgc atcagctcga gctggaccgc ccggagcccc
     2521 ggcaggagat cgttgagatc ggtggcaggg ggcggcggaa tctcctggtt gacgatccgg
     2581 cggcgccacc gcatcacgct gtccgcactg cgcgcctccc gcagctccgc gatccggttg
     2641 agcgccagaa gcccggtgtt ccagtcgatc tggccttcca ccgccttccg caccagcggc
     2701 cacaggctcc gcgacgtgcg ggcctcgaga atctggcgca cactgtcggc ttcgggactg
     2761 cccaggcgga gcgcctcgtg tatctccgaa taggtgacgt ggctggagtc gcccagccgg
     2821 atctgtacct gggccccgag cgtagtggtc gccaggagga gcagcgaaac caccgcaccg
     2881 acccttgccg cgcggctcac tgcgtcaccc gtcgcggcgc tgccacgagc cagagtgcgg
     2941 tcaccaccag cattcccacc gcggaaacat gtgccgccac tcctcctccg agcttcgcgt
     3001 agagcagccc aaacccggcc gccgccggca gtgccgccag gccggtcacc gcatgataca
     3061 ccccgaagcc ccggccgatt cgcttgggtg cgagccgcga caccagggtg cgctccgccg
     3121 actcggtgag ccccgccacc agtcccagcc cgaggaacac cgtgatcgca agcccgatgc
     3181 tgaggtcaag accgagcagc gctcccagcc cggcaaagac cagcccaccc agggccaccg
     3241 tgccgcgagg cccgacccgg tccaccagcc agccgccggg ataggacacg aaactccgca
     3301 ccacatggag cccggcccag accagcggaa tcgtggcgac tgccacgccg aggtcctgga
     3361 gcctgagcag cagcagcgtc tcggggagcc tgagcagcac cattcccgcc agcgccagga
     3421 ccggtcccca gaacactcgg ccactcgcat cggcgaggtt tgccgcgagc tcccttgggc
     3481 ggaccggcgc actcctgagg accaccagca gtaccagccc cgcgataacc ccgggcacga
     3541 tgctccaggt gagcacctgc cggacatcca ccgagtgccg cagcagccac caggccagta
     3601 gcgccccg
//
LOCUS       DATIFF010000380         5163 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1281504, whole genome shotgun sequence.
ACCESSION   DATIFF010000380 DATIFF010000000
VERSION     DATIFF010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5163
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1281504"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            75..857
                     /locus_tag="VLD58_05750"
     CDS             75..857
                     /locus_tag="VLD58_05750"
                     /inference="COORDINATES: protein motif:HMM:NF013152.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HSB53837.1"
                     /translation="MASLSMSTDGATALAKDEGSIDGLYNDPSGYGTFGVGHLVHAAK
                     YGSFLLAAATGNATWKAKLLTAYQGKVTYLPRTAVGWSDWADVKTKATELATAAILKK
                     TVDKLTDAEKTANKTAAETLVKVEDSLIARTVTDVLKDDLPTYEAAVNSKITGVTLTQ
                     DEFDALVSLCFNIGVPNFSGSGVVTKINENKYRAGDKVAEREAAITGIEQAFAAWNKS
                     GGVVLAGLTTRRASESGRFLKGARDEVAALKKAATPAAGAKK"
     gene            854..1324
                     /locus_tag="VLD58_05755"
     CDS             854..1324
                     /locus_tag="VLD58_05755"
                     /inference="COORDINATES: protein motif:HMM:NF018684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HSB53838.1"
                     /translation="MTTRGWVWASGMMVTLAVAGCSRPDPALDQPAGTSAAPPQAAVA
                     ASAQADPCGTATSQMELNLCKAAQARTADSLEGLEYNAATAWLKKRKSLDQVPLLDAS
                     EQAWKAYRDAQCKAEGGVYAGGSLAPTIVADCQARENRLRLELLKRVYADPVTP"
     gene            1383..2495
                     /locus_tag="VLD58_05760"
     CDS             1383..2495
                     /locus_tag="VLD58_05760"
                     /inference="COORDINATES: protein motif:HMM:NF016027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--N-acetylmuramyl-
                     (pentapeptide) pyrophosphoryl-undecaprenol
                     N-acetylglucosamine transferase"
                     /protein_id="HSB53839.1"
                     /translation="MAGGGTGGHLMPALAIATRLRERVPDLEPVLVGAERGIEAQLLP
                     KRDFRYYLLPAEPIYRRQWWKNIRWPFVAGRLLSRLSDLFDTEQPLGVVGTGGYASGP
                     AVWFGTRRHLPTAIQEQNAYPGLVSRLIAPRVRHIYLGLPEARARLKPGRSTQVFDTG
                     NPIPPPDPSRRPAALQRFGLDGRQPTLLITGGSQGAVAINQVVAAWLESGGSAGINVI
                     WATGRGSYQQFARLHRPPVVQVFDFLDPIADAYAVADLVVARAGMMSGAELCAWGLPS
                     ILIPLPTAAEDHQRYNAEALAAAGASRMILQRDLTPQTLGSAIRELLGNQGALEAMRQ
                     AALARGKPAAADAIVSYLLTLLGASGAFASAGTILD"
     gene            2505..3911
                     /gene="murC"
                     /locus_tag="VLD58_05765"
     CDS             2505..3911
                     /gene="murC"
                     /locus_tag="VLD58_05765"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR01082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HSB53840.1"
                     /translation="MDLFDPADPRPVHFMGIGGAGMSALALVARRRGVAVSGCDPDPS
                     GAADVALLGATVHQGHDPAHVDGARAVVATAAVPPEHPELVRARQLGVPVVPRKEALA
                     QLVAAGRVVGISGTHGKSTTTVMTTEALAAAGLDPTGLAGGRVDSWGGNARLGSDRLF
                     VVESDEYDKAFLTLTPAVAVVNNVEADHLECYGSVDSLEEAFATFAGRAETILGGADD
                     AGVSRVLQAAKRQGGKAATNGRIWRFGLASDADLRISDIEQAAGGSKAKVSLPGGRSV
                     RLELGVPGLHNLRNATAVLGVALALGAPLDPVLGALGKYGGLGRRFERLGEAKGIEFV
                     DDYAHHPTELVATLSAARQAFPGRRLIAVFQPHLFSRTAQHGVAMGRALSVADVAIVT
                     EIYAAREQPLPGVTGRTVAEAAQQAPSRATVVFEPNRSVVRDRVLEQARAGDVVLTMG
                     AGDITRVGRELVAWLRAA"
     gene            3893..4591
                     /locus_tag="VLD58_05770"
     CDS             3893..4591
                     /locus_tag="VLD58_05770"
                     /inference="COORDINATES: protein motif:HMM:NF020067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HSB53841.1"
                     /translation="MAPSRLSKPGYKILGGVALAVGLWLFAPRLMTGMTFFKVNRVEV
                     RGIRNARADEVVKALPVPKGMSIFDKLDPIEAAADSLPGFERVSVGRRLPGTLVVTLR
                     EADPVALVMRRGKLTLVSELGEVLPFDPTVGAPDLPVIREADSLVTALLARVRDADPT
                     FFASVSSGWRAGDDVMLEVDGQRYLFRPNAPAEVIRAVTVVAQDLAKTRKNRRWAELD
                     ARFAGQIVVRWGTA"
     gene            4588..>5163
                     /gene="ftsA"
                     /locus_tag="VLD58_05775"
     CDS             4588..>5163
                     /gene="ftsA"
                     /locus_tag="VLD58_05775"
                     /inference="COORDINATES: protein motif:HMM:TIGR01174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HSB53842.1"
                     /translation="MSVAPTRLVAALDLGTTKVAAVIAEVQGDSRSLTCRILGVGTER
                     CNGVRRGVVRGIEETTRAIQKAMKDAERMAGVEVGSVYCGIAGEHVAGQTSTGVVSVT
                     GGEIRTGDVARVNDVASSVPLGKEHELLHAIPQDYLVDMQPGISEPIGMTGSRLEAEV
                     YLVTVLSSVLQNLRRAVERAGYSVGEFVLEPL"
BASE COUNT          795 a         1696 c         1870 g          802 t
ORIGIN      
        1 acgtctcacg agaaggccac tcgcgccgga tcggccggca cggggggcga ggttcaggag
       61 cccgggagac gtgtatggca tcgctcagca tgagcactga tggtgcgacg gcgttggcga
      121 aggacgaagg atcgatcgac ggtctgtaca acgacccctc ggggtacggg acattcgggg
      181 tggggcatct ggtgcatgcc gcgaagtacg gcagcttcct gctggctgct gccacgggca
      241 acgcgacctg gaaggccaag ctcctgactg cctaccaggg caaggtgacg tatcttcccc
      301 gcacggcggt gggctggagc gactgggccg acgtgaagac caaggccacc gagcttgcca
      361 ccgcggccat cctcaagaag acggtggaca agctgaccga tgcggagaag acggccaaca
      421 agaccgcggc ggagacgctg gtgaaggtgg aggattcgct gatcgcgcgg acggtgaccg
      481 acgtgctcaa ggacgatctc ccgacctatg aagccgcggt caacagcaag atcaccggcg
      541 tcaccctgac ccaggacgag ttcgacgccc tggtctcgct gtgcttcaac atcggcgtcc
      601 ctaacttcag cgggtcgggt gtggtcacca agatcaacga gaacaagtac cgggccggcg
      661 acaaggtggc cgaacgcgag gcggcgatca ccggcatcga gcaggccttc gctgcgtgga
      721 acaagtcggg cggggtggtg ctggccggcc tgaccacccg gcgcgcctcc gaatcggggc
      781 ggttcctcaa gggcgcgcgg gatgaagtcg ccgcactcaa gaaggccgcc acgccggcgg
      841 cgggagccaa gaaatgacca cgcgcggctg ggtgtgggcc tccgggatga tggtgacgct
      901 ggccgttgcc gggtgttccc gcccggatcc ggcactcgat cagcccgcgg gaacctcggc
      961 cgccccgccc caggccgcgg tggcggcgtc ggcccaggcc gatccctgtg gcaccgccac
     1021 cagccagatg gagctcaacc tctgcaaggc ggcccaggcc cgcaccgccg actcgctcga
     1081 gggcctcgag tacaacgccg caaccgcctg gctcaagaaa cggaaatcgt tggaccaggt
     1141 tccgctgctc gatgccagcg agcaggcctg gaaggcgtat cgcgacgcgc agtgcaaggc
     1201 cgagggtggc gtgtacgccg gcggctcact cgcgccgacc attgttgccg attgtcaggc
     1261 ccgggagaac cggctccggc tcgagctgct caagcgagtc tacgccgacc cggtcacacc
     1321 gtagttcgct ctgagtagat tccggcgtcc ttatcgggcc gggatcactg ccttccatcc
     1381 tcatcgccgg cggcggcacc ggcgggcatc ttatgcccgc actggccatc gccacgcgcc
     1441 tccgcgaacg ggttccggac ctcgagccgg tgctcgtcgg agccgagcgc ggcatcgagg
     1501 cccagctcct ccccaaacgc gacttccgct actatctcct ccccgccgag ccgatctatc
     1561 gccggcagtg gtggaagaac atccggtggc cctttgtcgc ggggcggctc ctctcccgcc
     1621 tctccgacct gttcgacacg gagcagcccc tcggcgtggt cggcaccggc ggctatgcct
     1681 cgggccccgc ggtctggttc ggcacccgtc gccacctgcc cacggcgatc caggagcaga
     1741 acgcctaccc gggcctcgtc tcccgcctga tcgcgccgag ggttcgccac atctacctgg
     1801 gcctgcccga ggcccgtgcc cggctcaagc cagggcggag cacccaggtg ttcgataccg
     1861 gcaacccgat tcccccgccc gatccctccc gtcggcccgc cgccctccag cggtttggtc
     1921 tcgacggccg gcagccgacg ctcctcatca ccggcggaag tcagggcgct gtcgccatca
     1981 accaggtggt cgcggcctgg ctcgagtccg gcggcagcgc cggtatcaac gtgatctggg
     2041 cgacggggcg gggcagctac cagcagttcg cccgcttgca ccggccgccg gtggtgcagg
     2101 tgttcgactt cctcgacccc atcgccgacg cctatgcggt ggccgacctg gtggtggcac
     2161 gggcagggat gatgagcggg gccgagcttt gcgcctgggg attgccgtcg atcctgattc
     2221 cccttcctac cgcggccgag gatcatcagc gctacaacgc cgaggccctg gcggcggccg
     2281 gggcgtcgag gatgattctc cagcgagatc tcacccccca gaccctcggc tcggccatcc
     2341 gggagctgtt gggcaaccag ggggctctgg aggccatgcg acaggccgcc ctggcccggg
     2401 gaaaaccggc cgccgccgat gcgattgtgt cgtatctctt gacgcttttg ggggcctcgg
     2461 gcgctttcgc aagtgcaggt acgattttag attagctcac caacatggat ttgttcgatc
     2521 ccgccgatcc ccgtcccgtc catttcatgg gcatcggtgg cgctggcatg agtgctttgg
     2581 cgctcgtcgc ccgccgccgc ggggtagcag tcagcgggtg cgaccccgat ccatccggcg
     2641 ccgccgacgt cgccctgctc ggcgccaccg tccaccaggg ccatgatccc gcacacgtcg
     2701 atggtgcccg cgcggtggtc gccaccgcgg cggtgccgcc cgagcacccc gaactggtcc
     2761 gtgcccggca gcttggtgtg cctgtcgtgc cgcgaaagga agcgttggcg cagctggtgg
     2821 ccgctgggcg agtcgtcggg atcagcggga cccacggcaa gtcgactacg acggtcatga
     2881 ccaccgaggc gctggcggcg gccggcctgg atccgacggg gctcgcgggt ggacgagtgg
     2941 atagctgggg cggcaatgcc cggctcggca gcgaccggct cttcgtggtc gaatcggacg
     3001 agtacgacaa ggcgtttctc accctgacgc cggcggtggc ggtggtgaac aacgtcgagg
     3061 ccgatcatct cgagtgctac gggagcgtag actcgctgga agaggccttt gcgacctttg
     3121 cggggcgggc tgagacgatc ctgggcgggg ccgacgatgc cggggtgagt cgggtgcttc
     3181 aggcggcaaa gcggcagggc ggcaaggcgg ccacgaacgg ccggatctgg cgcttcggat
     3241 tggcttccga tgccgacctc aggatctccg atatcgagca ggccgccggc ggcagcaagg
     3301 ccaaagtgag cctcccgggt ggaaggtcag tccggctcga actgggtgtg cccgggctcc
     3361 acaatctgcg taacgcgacc gcggtgctcg gggttgccct ggcgctgggc gccccgctcg
     3421 atcccgtcct cggtgccctg gggaagtatg gcgggctggg ccggcggttc gagcggctgg
     3481 gagaggccaa gggcatcgaa ttcgtggatg actatgctca ccacccgacc gagctggtgg
     3541 ccaccctctc ggcagcccgg caggcgttcc cgggacggag actgatcgcg gtgttccagc
     3601 cgcatctctt ctcccgcacc gcgcagcacg gcgtcgcaat gggccgggcc ctctccgtcg
     3661 ccgacgtggc gatcgtgacc gagatctacg ccgcccgcga gcaaccgctt cccggcgtga
     3721 ccggccgcac cgtggccgag gccgcgcagc aggcgccgag ccgggcgacg gtggtgttcg
     3781 agccgaaccg aagcgtggtg cgggatcggg tgctggagca ggccagggcg ggtgacgtgg
     3841 tgctcacgat gggcgcaggc gacatcaccc gggtcggccg ggagctggtg gcatggctcc
     3901 gagccgcctg agcaagccgg gctacaagat cctcggcggg gtcgcgctgg cggtggggct
     3961 ctggctcttc gccccgcggc tcatgaccgg gatgacgttc ttcaaggtga accgggtcga
     4021 ggtgcggggt atccggaacg cccgggccga cgaggtggtg aaggcgctgc cggtgccgaa
     4081 ggggatgagc atcttcgaca agctcgaccc gatcgaggcg gccgccgatt cactgccggg
     4141 tttcgagaga gtgtcggtgg gaaggcggtt gccgggcacg ctggtggtga cgcttcggga
     4201 agcggacccg gttgccctgg tgatgcggcg cggcaagctg acgctggtga gcgagctggg
     4261 tgaggtgctt cctttcgacc cgacggtggg agcaccggat ctcccggtga tccgggaagc
     4321 cgactcactg gtaacggcgc tgctggccag ggtgcgtgac gctgacccga cgttcttcgc
     4381 cagtgtttcg tccgggtggc gcgccgggga cgatgtgatg ctcgaggtgg atgggcagcg
     4441 atacctgttc cggcccaatg cgccggcgga ggtcattcga gcggtgacgg tcgtggcgca
     4501 ggatctcgca aagacgcgca agaatcgccg gtgggccgag ctcgatgcgc ggttcgccgg
     4561 gcagatcgtg gtgcgctggg ggacggcatg agcgtcgccc ccacgcgcct ggtcgccgcg
     4621 ctcgatctcg gcaccaccaa ggtggccgcc gtcatcgccg aagtgcaggg cgacagccga
     4681 agcctgactt gccggatcct tggcgtcggg acggagcgct gcaatggggt ccgccggggc
     4741 gtggtccgcg gaatcgagga gaccacccgc gccattcaga aggcgatgaa ggatgccgag
     4801 cggatggcag gcgtcgaagt gggctcggtc tactgcggca tcgcggggga acatgtggcg
     4861 gggcagacct cgaccggcgt ggtctccgtg accggcggcg agatccgcac cggcgacgtg
     4921 gcccgggtga acgacgtggc ctccagtgtc ccgctcggga aggagcatga gctgctccac
     4981 gcgattcccc aggactatct ggtcgacatg cagcccggga tcagcgagcc gatcgggatg
     5041 accggctccc ggctcgaggc cgaggtgtac ctggtgacgg tgctctccag cgtgctgcag
     5101 aacctccgcc gcgcggtgga gcgggcgggg tacagcgtcg gcgagttcgt gctggagccg
     5161 ctg
//
LOCUS       DATIFF010000381         1020 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_205293, whole genome shotgun sequence.
ACCESSION   DATIFF010000381 DATIFF010000000
VERSION     DATIFF010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205293"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1020)
                     /locus_tag="VLD58_05780"
     CDS             complement(<1..>1020)
                     /locus_tag="VLD58_05780"
                     /inference="COORDINATES: protein motif:HMM:NF014051.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HSB53843.1"
                     /translation="EFAFNVVFWLVLIVRDAFEGIVVRELARHPRLIRPLVNHVLAVK
                     GLLALGLFTGLALIGALTLSSAADRAIFALYGLLLLTTALGLDFVYRGTERMALVALS
                     LCIRTMIYAAGVWFWVGDPTRIVWVPAWLALGEACGIGLVWLCYSRQNGLPRPVLGLR
                     FLWVFLRRGRSVCLIQVAQTVIGSADLMVVGLMSPWADVGRYGATHRMVASLLTFGLI
                     FQQVTFPMLARSWRQTPVAGRASLNALIQVLTIGLIPVAVGGAVLSVPLVRFLLPGDE
                     YAGASLLLALGIWRAPLLTLAYLYQTTLIAVNRESAGVRLLLAGALGSGPLVGVFCWA
                     FGLPGA"
BASE COUNT          216 a          375 c          335 g           94 t
ORIGIN      
        1 ggccccggga agcccgaacg cccagcagaa gaccccgacc agcggccccg acccgagtgc
       61 accggccaac aggagccgga ctccggccga ctcgcggttc accgcgatca gcgtcgtctg
      121 ataaagatag gccagcgtca gcagcggggc gcgccagatc ccgagggcca agagcaggct
      181 ggcccccgcg tattcgtcgc ccggcaggag gaatcggacg agcgggaccg acagcaccgc
      241 cccgcccacc gccaccggga tcaggccgat cgtcaggacc tggatcaggg cgttgagcga
      301 cgcccggccc gcgaccggcg tctgccgcca tgatcgggcc agcatcggga acgtgacctg
      361 ctggaagatc aggccgaagg tcagcaacga cgcgaccatc cgatgcgtcg cgccgtagcg
      421 gccgacgtcg gcccaggggc tcatcaggcc gaccaccatc aggtcggccg agccgatcac
      481 cgtctgagcg acctggatca ggcagaccga gcggccccgc ctcaggaaga cccagaggaa
      541 ccggaggccc aggaccggcc ggggcaggcc gttctgccgc gagtagcaga gccagaccag
      601 cccgatcccg cacgcctccc cgagcgccag ccaggccggc acccagacga tccgcgtggg
      661 atcgccgacc cagaaccaaa ccccggccgc gtagatcatc gtccggatgc agagcgagag
      721 cgccaccagc gccatccgct cggtcccccg gtagacgaaa tcgagcccca aggccgtcgt
      781 caagaggagc agcccgtaaa gggcgaaaat cgcccggtcg gccgccgagg agagcgtcag
      841 ggccccgatc agggcgaggc ccgtgaacag accgagcgcc aggagcccct tgaccgccag
      901 cacatgattg accagcggac ggatcagccg gggatgacgg gccagctccc gcaccacgat
      961 cccttcgaac gcatcgcgca cgatcaggac cagccagaag acgacattga aggcgaactc
//
LOCUS       DATIFF010000382         1831 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1128661, whole genome shotgun sequence.
ACCESSION   DATIFF010000382 DATIFF010000000
VERSION     DATIFF010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1128661"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..934)
                     /locus_tag="VLD58_05785"
     CDS             complement(<1..934)
                     /locus_tag="VLD58_05785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HSB53844.1"
                     /translation="MHSPPIPGFRSVPFTGVIYVMAEAQRHGYRYGHPDWCNLGQGMP
                     ETGPLPGAPPRVDAVHISLDDQEYAPVPGIPELRHAVAAMYNHLYRQEKASQYTERNV
                     CICGGGRASLTRAVAALGEINLGHFLPDYTAYEELLDIFKLFTAIPILLEGSRGYEFS
                     LDDLRREITGRGLSAVLLSNPNNPTGKVIRGAELEGWVATARELQCSLLLDEFYSHYV
                     WAAADGPHALVSAAKYVEDVDRDPVILFDGLTKNWRYPGWRCTWIVGPRAVIDAVSST
                     GSFLDGGGSKPLQRSAVPLLAPEVVAQETRAIRQA"
     gene            complement(1101..1508)
                     /locus_tag="VLD58_05790"
     CDS             complement(1101..1508)
                     /locus_tag="VLD58_05790"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HSB53845.1"
                     /translation="MVPPASVAGRLLGPAPLGSRVGALVVLLPGIVMLIWGAISLGPN
                     LTPATQPLAEGEMVERGAYRVVRHPVYLGLSLSLWGLAWSLTTPWTGVVVAVASFGYF
                     DRKAAVEERWMLARFPAYEAYRKRVGKLLPRIV"
BASE COUNT          310 a          646 c          600 g          275 t
ORIGIN      
        1 aggcctgccg gatggcccgg gtctcttgtg ctaccacctc gggcgccagg agcggcacgg
       61 ctgagcgctg cagcggcttg ctaccgccgc catccaggaa ggagccggtg ctggagaccg
      121 cgtcgatcac cgcccggggc cccacgatcc aggtgcagcg ccacccggga taacgccagt
      181 tcttggtgag gccatcgaag aggatgaccg gatcgcggtc gacatcctcc acgtatttcg
      241 ccgccgacac caacgcgtgg ggcccgtcgg ccgcggccca gacgtagtgg gaatagaact
      301 cgtcgagcag gagcgagcac tggagctcgc gcgccgtcgc cacccagccc tcgagctccg
      361 ccccgcgaat caccttcccc gtgggattgt tgggattcga gagcaggacg gcggagagcc
      421 cgcgaccggt aatctcacgc cgcaggtcgt ccagcgaaaa ctcgtagcct cggctccctt
      481 ccagcaggat cgggatcgcg gtgaagagct tgaagatgtc gagcagctct tcgtaggcgg
      541 tgtagtcggg aaggaagtgg ccgaggttga tttcgcccag cgccgcgacg gcgcgggtga
      601 gcgacgcgcg cccgccgcca cagatgcaga cattgcgctc ggtgtactgc gaggccttct
      661 cctgccggta gaggtggttg tacatcgccg ccacggcgtg ccgcagctcg ggaatccccg
      721 gcaccggggc gtactcctga tcgtccaggc tgatgtggac cgcgtccact cgcggtggtg
      781 cgccggggag cggtcccgtc tccggcatgc cctggcccag gttgcaccag tccgggtggc
      841 cgtagcggta gccgtgccgc tgcgcctcgg ccatgacgta gatgaccccg gtgaagggga
      901 cgctgcgaaa gccggggata ggcggcgaat gcatcagagg acttttggtg aaggagtgag
      961 cctagataat aaccggggtt cggtgtgggg tggctgattc ctcgcggctg tagttcgcgg
     1021 gatcgcacgg ctcatctccg acaaccgcga actaacgccg ctgcggggat cagccacccc
     1081 agcaccgaac ccccataccg tcacacgatg cgcgggagga gtttcccgac ccgtttgcgg
     1141 taagcttcgt acgccgggaa ccgcgccagc atccaccgct cctccaccgc ggccttgcgg
     1201 tcgaagtacc cgaacgacgc caccgccacc accacgccgg tccacggcgt agtcagcgac
     1261 cacgccagcc cccagagcga gagcgacagc ccgaggtaga ccggatgccg caccacccgg
     1321 tacgcgcccc gctcgaccat ctctccttcg gcgagcggct gggtcgccgg tgtgagattg
     1381 gggcccagcg agatcgcacc ccagatgagc atcacgatgc cgggcagcag caccaccagc
     1441 gcgccgaccc gcgagccgag tggcgccggt ccgagcaacc ggccggccac gctcgcgggt
     1501 ggaaccatcg tcgccagcca gggcagcgat cccactatga ggatcaaaac ggcctgcccc
     1561 cagacccagg ggtcccgtag cgcgttaccc agcttcatag gccgcactcg ctctcatgaa
     1621 tgtgcttact cgcccgctcc ctggcgtccg actatcttgt gcctcccaac cgtctgacgc
     1681 tcaggagagc ccgcgtgtcg tccatcactc cccgccgcca tcagcccgag ttgccccagg
     1741 accgcctcat tctcgccgaa ccaccgggcg gcgaagcgct ggagatggac gtgctcttcg
     1801 tcggcgccgg cccggccggc ctggccggcg c
//
LOCUS       DATIFF010000383         3237 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_512532, whole genome shotgun sequence.
ACCESSION   DATIFF010000383 DATIFF010000000
VERSION     DATIFF010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3237
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512532"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(16..621)
                     /locus_tag="VLD58_05795"
     CDS             complement(16..621)
                     /locus_tag="VLD58_05795"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004797 - thymidine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HSB53846.1"
                     /translation="MYHGSRPGWIEVIAGVMFSGKSEELIRRVRRAIIARRKVQVFKS
                     HLDSRYTGLYSVSTHDGREIEATPVDSAAEIFRLVKPDTELVAIDEAQFLDDELVTVA
                     SALAARGVRVILAGTDTDFRGEPFGPMGRLLAIAESVDKLQAICVICGDLATRNQRLV
                     DGKPARYDSPTILVGGRETYEARCRHCHRVPRKDEDQTALL"
     gene            768..1055
                     /locus_tag="VLD58_05800"
     CDS             768..1055
                     /locus_tag="VLD58_05800"
                     /inference="COORDINATES: protein motif:HMM:NF012442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HSB53847.1"
                     /translation="MTKQQMVSAVATKLGRPKAEVARVLDTLFGADGLIAAELRRGRK
                     VQLSGFGNFEPRRRKARTARNPRTGRTMSIKASVAPVFKAARNFKELVNRK"
     gene            complement(1156..2598)
                     /locus_tag="VLD58_05805"
     CDS             complement(1156..2598)
                     /locus_tag="VLD58_05805"
                     /inference="COORDINATES: protein motif:HMM:NF015817.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DbpA RNA binding domain-containing protein"
                     /protein_id="HSB53848.1"
                     /translation="MTDLHLAPALAGALEALGYTPQDQAIRDQVPTAARGHNLALAWP
                     PAARYSAPALAGMMSAQILNGTRAVVLAPAHSLAEWADLVLPLCRAAGLTAVVAQTAS
                     RATRRLADPDLKVLVTSPATALALLERSAFKADQLGHVVLAWPEQFDSDEALAALMQD
                     LPAEAQRIVVLAAPAPGHPLVERYARRAHLTGPLLPAPESEAPARPAVRVVSVGWSQR
                     SGALAGLLESEDPVTVSVWCADQGSAAEARAALPATDASIQITTGEGQKAALVVAWDL
                     PAPAQLNLLRAQGDLVLLVPPHAVGYLCRCTSRQSQARIPGTLETIRDDAARRRAAVA
                     REIEAGELDGDLMALAPLFERHDPVTVAAALNRLWRKAASAPIAPAAAESAGAPGGAF
                     PAKVWISAGKKDGATPADLVAVLNREVGMAAGKIGRIEIRELFSLVEVPAADAEEIAR
                     KLSGKTVRRRTVTAKVDKPSRPTRPRLSRD"
     gene            2804..>3237
                     /locus_tag="VLD58_05810"
     CDS             2804..>3237
                     /locus_tag="VLD58_05810"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSB53849.1"
                     /translation="MPDPLSPNLAYLKPSETVAISNETKRRRAAGEDVIDLSVGEPDF
                     DTPRAAAEAGEAAIEKGMTRYPANIGIAELRAAIARNMSLMSGGRAINPDQLVVSSGS
                     KQSIFNACFTLFGPKDKVLIPSPAWVSYPQIVSLCRAEPVLVP"
BASE COUNT          510 a         1137 c         1095 g          495 t
ORIGIN      
        1 cctccggcca ccggcctaca gcaacgcggt ttgatcttca tccttgcgcg gcacccggtg
       61 gcaatggcgg cagcgggcct cgtaggtctc ccggccgccc acgaggatgg tgggagagtc
      121 gtaccgcgcc ggcttgccat ccaccagccg ctggttgcgg gtagcgaggt cgccgcagat
      181 cacgcagatg gcctggagtt tgtccaccga ctcggcaatc gcgagcagcc gacccatcgg
      241 gccgaacggt tcgccccgga aatcggtgtc ggtgccggcc aggatcaccc gcacgccgcg
      301 cgccgcgagg gcggaggcga cggtgaccag ctcgtcatcg aggaactggg cctcgtcgat
      361 ggcgacgagt tcggtgtcgg gcttgaccag gcggaagatt tcggcggcgg agtcgaccgg
      421 agtggcctcg atctcacggc catcgtgagt cgagacgctg tacaggccgg tatagcggga
      481 gtcgaggtgc gacttgaata cctgcacctt gcgccgggcg atgatcgcgc ggcgcacgcg
      541 gcgaatcagt tcttcgctct tgccgctgaa catcacgccg gcgatcactt cgatccaccc
      601 ggggcgtgat ccgtgataca tcgctacggc ctcgacgaat tgaggttggg gatcgctgag
      661 gatacggcca ccgggggagt gggtcaagcg agtgatggcg ccgcttgcgg cttttccgag
      721 cccgtcgcca tattccgcgc ccccaaatcc agcctccgga gtccggtgtg accaagcagc
      781 agatggtgag tgcggtcgcc acgaagctcg gccgccccaa ggccgaggtc gcccgggtgc
      841 tggataccct gttcggagcc gatggactca ttgcggcgga actgcggcgc ggacggaagg
      901 tgcagctctc cggcttcggc aacttcgagc cccgccgccg gaaggcccgc accgcccgca
      961 atccgcgcac cgggcgcacc atgagcatca aggcctcggt ggcgccggtg ttcaaagcgg
     1021 cccggaactt caaggaattg gtaaatcgaa agtaggccgg aggccggggg ccggcggagg
     1081 ctggagctgg aggcttcatt gttattccct ccggcctccg cccgcctccg gcctccagtc
     1141 tcagtcctaa ctcctctaat ccctcgacaa cctcggccgg gtgggtcgcg acggcttgtc
     1201 caccttcgcc gtcaccgtcc ggcgccgcac cgtcttcccc gacaacttcc gcgcaatttc
     1261 ctccgcatcc gcggcgggca cttccaccag tgagaagagc tcgcggatct cgatccttcc
     1321 gatcttcccc gccgccatcc cgacttcccg gttgagcacc gccaccaggt ccgccggggt
     1381 ggcgccatcc ttcttcccgg cgctgatcca gaccttggcg gggaaggcgc cgcccggggc
     1441 tcccgcgctt tccgccgccg ccggcgcgat cggcgcgctg gccgccttcc gccagaggcg
     1501 gttgagcgcc gcggccaccg tcaccgggtc gtgccgctcg aacagcgggg ccagcgccat
     1561 gaggtcaccg tccagctccc ccgcttcgat ctcacgcgct acggccgcgc ggcggcgggc
     1621 cgcgtcgtcg cggatcgtct cgagggttcc ggggattcgg gcctgcgact ggcgcgaggt
     1681 acaccgacac agatagccca cggcgtgggg cggtaccagg agcaccagat cgccctgcgc
     1741 gcggagcagg ttgagctggg ccggggcggg aaggtcccac gccacgacca gcgcggcctt
     1801 ctgcccttcg ccggtagtga tctgaattga cgcatcggtc gccggtaggg ccgcccgcgc
     1861 ctcggccgcg ctgccctggt cggcgcacca gacgctcacc gtgacgggat cttcactctc
     1921 gaggagcccg gccagtgctc cactgcgctg agaccagccg accgacacga ccctgaccgc
     1981 gggccgcgcc ggtgcttcgg actcgggcgc aggaaggagc ggcccggtga gatgagcgcg
     2041 gcgggcgtag cgttcgacca gcggatgccc cggcgccggg gccgccagca ccacgatccg
     2101 ctgcgcctcg gcgggcagat cctgcatcag cgccgcgagc gcttcgtcgg aatcgaactg
     2161 ctcgggccag gccagcacga catggccgag ctggtcggcc ttgaaggcag accgctccag
     2221 cagcgccagc gcggtggcag gggaggtaac gaggaccttg agatcggggt cggcgaggcg
     2281 ccgggtggcg cgcgaggcgg tctgggccac cacggcagta agcccggcgg cgcgacagag
     2341 cggcagcacc aggtcagccc actcggccag cgaatgggcg ggcgccagca ccacggcgcg
     2401 ggttccgttg aggatctggg cgctcatcat cccggccagg gccggggcgc tgtagcgggc
     2461 cgcagggggc caggccaggg ccaggttgtg accccgcgcc gcggtcggga cctgatcccg
     2521 gatcgcctga tcctgggggg tgtacccgag cgcttccagg gcacccgcaa gcgcgggcgc
     2581 cagatgcaga tctgtcattc cagacatcgc cgacctcgat tgtcaaacag ctttgtaagc
     2641 ggacgaagaa gctaaaccag ttgacttcca tgcaccaccc gaggaatttc ccccgtccgc
     2701 acaattgtcg agccgatgga ctcactcgtg ggcccgcaca gcatggcggg ccttccgaat
     2761 gttcaggacc cggctctcga ccttccaccg caggactccg gcgatgcccg atccgctctc
     2821 acccaacctg gcgtacctca agccctccga aaccgtcgcg atcagcaatg agaccaagcg
     2881 ccgccgggcc gccggtgagg acgtgatcga tctcagcgtg ggcgagcccg acttcgacac
     2941 accccgcgcc gccgccgagg ctggggaggc cgcgatcgag aaagggatga cccgctatcc
     3001 cgcgaacatc gggatcgcgg agctgcgcgc cgccatcgcc cgcaacatgt cgctcatgtc
     3061 cggaggacgc gccatcaatc ccgatcagct ggtggtgagc tccggttcga agcagtcgat
     3121 cttcaacgcc tgctttacgc tcttcgggcc caaggacaag gtcctgatcc cctcgccggc
     3181 ctgggtgtcc tacccccaga tcgtgtcgct ttgccgggcc gagccggtgc tggtgcc
//
LOCUS       DATIFF010000384         1488 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_819516, whole genome shotgun sequence.
ACCESSION   DATIFF010000384 DATIFF010000000
VERSION     DATIFF010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1488
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_819516"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..710
                     /locus_tag="VLD58_05815"
     CDS             <1..710
                     /locus_tag="VLD58_05815"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB53850.1"
                     /translation="ALGPGFAPAPGFQRSERYTTYRISPEGGEQAVWKRLDRTSVQQR
                     IRKGEKAGVQVLMGTTEADWLAMAQLEEAVQQGHGVPAPPRRLFTGLLRDLQQQGLVD
                     LYLGRIPDGQVAAGFVMYKGPRDWIYAFSASDPDLIREYRATHVLLWAGLRAAVSANV
                     VLDLGRTAPEQASLAEFKLRWGSTTVPLVYDYFPTAGGLNQARRDTGALALASKVWSR
                     LPRPVARMGSALFRYLG"
     gene            714..1178
                     /locus_tag="VLD58_05820"
     CDS             714..1178
                     /locus_tag="VLD58_05820"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012360.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HSB53851.1"
                     /translation="MDFLWRLRKKVLKRWARNAFFPGWRVQLLRWCGFSIGRDVYIAD
                     DIIIAEELRSRGLITIGDRVSMAPRITLVTTSHPNNSLIRPFAPEKTGPIVIEADVWL
                     GAGVVVLPGVTIGRGAIVGANSVVAGDVPPLHVVAGQPAKTLRVLTPPPGWS"
     gene            1175..>1488
                     /locus_tag="VLD58_05825"
     CDS             1175..>1488
                     /locus_tag="VLD58_05825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53852.1"
                     /translation="MIHPLLEGRPTAAERWAFDLLVDLSRLLHAVPEDASAVQVSLVE
                     SLPAGDFLAEQGRVRLSRGLLRRVLDIGGAAVEQRTTERDHHGRVPASANPQVQSHAE
                     RSL"
BASE COUNT          220 a          517 c          511 g          240 t
ORIGIN      
        1 aggcgctggg acccgggttc gcgccggcgc caggattcca gcgctccgag cggtacacga
       61 cctaccggat ctcgcccgaa ggcggcgaac aggcagtctg gaagcggctc gaccgaacca
      121 gcgtgcagca gcggatcagg aaaggcgaga aggcgggcgt ccaggtgttg atgggcacca
      181 ccgaagcgga ctggctcgcg atggcccagc tcgaagaggc ggtgcagcag ggccacggcg
      241 taccggctcc gccacgacgc ctcttcaccg gcctgctccg ggacctccag cagcagggtc
      301 tggtcgacct ctacctcggt cggattcccg atggccaggt ggctgcgggc ttcgtgatgt
      361 acaagggtcc gcgcgactgg atttatgcct tcagcgccag tgaccccgac ctgatccggg
      421 agtaccgggc gacccacgtg ctgctctggg ccgggctccg ggcagcggtg tccgccaacg
      481 tcgtcctcga cctgggccgc accgccccgg agcaggcgag ccttgccgag ttcaagctcc
      541 gctggggttc caccacggtg cccctggtct atgattattt cccgacggcc ggcgggctca
      601 accaggcccg gcgcgacacc ggcgcgctgg ccctggcgtc gaaggtctgg agccggctcc
      661 cgcgccccgt cgcgcgaatg ggctccgcgc tcttccgcta tctcgggtag gccatggact
      721 ttctctggcg gctccgcaag aaggtgctca agcgctgggc ccggaacgcc ttctttccgg
      781 gctggcgggt ccagctgctc cgctggtgcg gcttctcgat cggccgggat gtctacatcg
      841 ccgacgatat catcatcgcc gaggagctca ggagccgggg cctgatcacc atcggcgacc
      901 gggtgagcat ggcgccacgg atcacgctgg tcaccacctc ccatcccaac aactcgctga
      961 tccgcccgtt cgcgccggag aagaccggcc ccatcgtcat cgaggccgac gtctggctcg
     1021 gtgccggcgt tgtggtgctg ccgggagtga cgatcggacg cggggccatt gtcggagcca
     1081 acagcgtcgt cgccggcgat gtgcctccgc ttcacgtcgt ggctggccag ccggcgaaaa
     1141 cccttcgcgt gctgaccccg cctccaggct ggtcgtgatc cacccgctgc tcgaagggcg
     1201 accgaccgcg gcggaacgct gggcgttcga cctgctcgtg gacctttcgc gcctgctgca
     1261 tgccgtgccc gaggacgcca gcgccgtaca ggtgagtctc gtcgagtcgt tgccggcggg
     1321 ggactttttg gcggagcagg gccgggtgcg gctcagccgc ggcttgctac gtcgggtcct
     1381 ggatattggc ggggccgccg tggaacagcg caccaccgaa cgggaccacc acggcagggt
     1441 acccgcgagc gcaaatccgc aggtccaatc ccacgctgaa cggtccct
//
LOCUS       DATIFF010000385         2917 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_205607, whole genome shotgun sequence.
ACCESSION   DATIFF010000385 DATIFF010000000
VERSION     DATIFF010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2917
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205607"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            176..1879
                     /locus_tag="VLD58_05830"
     CDS             176..1879
                     /locus_tag="VLD58_05830"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HSB53853.1"
                     /translation="MRLLSRYLLRQLAAPFLFALGALTSLMLLSQIAKKFGALVGKGL
                     PWGVIAEVFALSVPFIVAMTLPMAVLLAVLYAFSHLAADNEITAMRASGISVYQILAP
                     VLVWGVVMSGLNFLFVDQVLPRTNARLRGLLIDIGRKKPTFELREQVINEVPPSEYFL
                     RAGRIDAATGRLKDVTIYDVGGDASSRRIIYADSGLMAYAEGQTDLSLRLYDGAIHQY
                     RPTDPMAFQLTYYKVNDIRVKNVFDELVRNSSETIRGDREMSTCEMLAVVQEARGDQH
                     QAAREQVELLQGDLRKLLDLPPLPPAVRESTTVRLPGYCRLVDRLQAIILPKTAEAQT
                     PAQQPAPAPAPILPRQAPRQGGKVPLQVPGKAQGTRPAKPLLPAGRPNATPVPRPPFA
                     QAADSARPSPAAPPAPRIPRVEPDHERPVLSNWAQVATATDRIRDADRRADRFLVEIH
                     KKWAISLACVSFVIIGIVMALRFPRGGIGLVIGGGLLVFSVHYVGLTAGESLADRGFV
                     SPWAAMWTPNIVLTVLGLIGLVRVSRESGSTRGGDFQEVVEGIRYLFRRLRGRASTSP
                     R"
     gene            1876..>2917
                     /locus_tag="VLD58_05835"
     CDS             1876..>2917
                     /locus_tag="VLD58_05835"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HSB53854.1"
                     /translation="MIATRTLDRYVFGSWLRIFVLTALGFPLVSILINLTDTLNRLLD
                     RGLTMREIVVSYVYSIPENAFLVMPAAVLFATVFTVGAMGRHSELTAAKAGGLSFHRL
                     MLPIFIASALATGLAFVVGEIAPGATARQLEIQKDKQTRSSSSRFNFVYRADQGWVYT
                     VRSLDLAARKLRGLLLERQGSGLEYPAMIVTADSAVYDTLSHRWRLVTGTSRLIAGPD
                     RQAQFEFHTLRLKALTQTPADLLAEPKAPDEMRYAELGRYIDALKRSGNDANKLIVEQ
                     ALKLALPATCLIIALFGAPLAVQAPRAGAAVGVAISLGTTVLFLLMTQIMKAVGSGGL
                     INPLVAAWLPNMV"
BASE COUNT          444 a         1037 c          986 g          450 t
ORIGIN      
        1 acacccagcg ccgtcgtatc agcttgcgca aggagggccc gtggcagcca gacgaggcag
       61 cccagggcga ccagaagacg tgtcactcta gaggatcacg gcgaggcttg aggatgaagg
      121 atcgcgtcaa tataatggcc cgaacaactc cttacaacca tatgagttag cccgcgtgcg
      181 cctgctcagt cgatacctgc ttcgccagct cgcggccccc ttcctcttcg ccctcggcgc
      241 gctcaccagc ctgatgctgc tgagccagat cgccaagaaa ttcggggcgc tggtgggcaa
      301 gggactgccg tggggggtca tcgcggaggt gttcgcgctg agcgttccct tcatcgtggc
      361 catgacgctg ccgatggcgg tgctgctggc cgtgctctac gccttcagcc acctggccgc
      421 cgacaacgag atcaccgcca tgcgggcgag cgggatcagc gtctaccaga tcctcgcccc
      481 ggtgctggtg tggggcgtgg tgatgtcggg gctcaacttc ctgttcgtgg accaggtgct
      541 gccccgcacc aacgcccgcc tccgcggcct cctgatcgac atcggccgga agaagcccac
      601 ctttgagttg cgcgagcaag tgatcaacga ggtcccgccg tcggagtact tcctgcgggc
      661 gggccggatc gacgcggcca ccggccggct caaggacgtc accatctacg acgtgggcgg
      721 cgacgccagc agccgccgga tcatctacgc cgacagcggg ctcatggcct acgccgaggg
      781 gcagaccgac ctgagcctgc gcctgtacga cggcgcgatc caccagtatc ggccgaccga
      841 ccccatggcg ttccagctca cgtactacaa ggtgaacgac atccgggtca agaacgtgtt
      901 cgacgagctg gtccggaaca gctccgagac catccggggc gaccgcgaga tgagcacctg
      961 cgagatgctg gccgtggtcc aggaggcccg aggcgaccag caccaggccg cgcgcgagca
     1021 ggtcgagctg ctccagggcg acctccggaa attgctggac ctgccgccgc tcccgccggc
     1081 cgtgcgggaa tccaccaccg tccgccttcc tggctactgc cggttggtgg accgactgca
     1141 ggcgatcatt ctccccaaga cggcggaggc gcagacaccc gcacagcagc cggcgccagc
     1201 cccggcgccc attctccccc ggcaggcgcc gaggcaggga ggaaaggtgc ccctgcaggt
     1261 gcccgggaag gcccagggga cgcgtccggc caagccgctc ctgcccgccg gccgaccgaa
     1321 cgcgaccccg gtcccgcgcc cgccgttcgc gcaggcggcc gattctgccc ggccgagccc
     1381 ggcggctccg ccggcgcctc ggattccccg ggtcgagccg gaccatgaac gacccgtcct
     1441 gtccaattgg gcccaggtgg ccaccgccac cgaccgtatc cgggacgccg accgccgggc
     1501 ggaccggttc ctggtcgaga tccacaagaa gtgggcgatc agtctcgcct gcgtctcgtt
     1561 cgtcatcatc gggatcgtga tggcgctccg gttcccgcgc ggcgggatcg ggctggtgat
     1621 cggcggcggg ctgctggtgt tctcggtgca ctacgtcggg ctcacggccg gggagagcct
     1681 ggctgaccgc ggcttcgtgt cgccctgggc ggccatgtgg acgcccaaca tcgtcctcac
     1741 cgtcctgggg ctgatcggcc tggtgcgggt gagccgcgag tcgggctcca cgcgcggggg
     1801 cgacttccag gaggtcgtgg agggcatccg ctacctgttc cggcggctgc gcgggcgcgc
     1861 ctcgacgagc ccgcggtgat cgccacccgc accctcgacc ggtacgtctt cgggagctgg
     1921 cttcgcatct tcgtgctcac cgcgctcggc ttcccgctgg tctcgatcct gatcaacctc
     1981 acggacacgc tcaaccggct gctcgaccgc ggcctcacca tgcgggagat cgtggtcagc
     2041 tacgtctact cgattcccga gaacgccttc ctggtgatgc cggcggccgt gctcttcgcc
     2101 accgtgttca cggtgggggc gatggggcgg cactcggagc tcaccgccgc caaggccggc
     2161 ggcctgagct tccaccggct gatgctgccg atcttcatcg cgtcggcgct ggcgacaggg
     2221 ctcgccttcg tggtgggcga gatcgcgccg ggcgcgacgg cccgccagct cgagatccag
     2281 aaggacaagc agacgcgctc gagcagctcg cggttcaact tcgtctatcg cgcggaccag
     2341 ggctgggtct acaccgtccg ctcgctcgac ctcgcagcgc gcaagctccg ggggctcctg
     2401 ctggagcgcc agggatcggg gctcgagtat ccggcgatga tcgtgacggc ggacagtgcc
     2461 gtctacgaca cgctgagcca ccgctggcgg ctcgtcaccg ggaccagccg cctgatcgcc
     2521 gggccggacc ggcaggcgca gttcgagttc cacacgctgc gcctcaaggc gctcacccag
     2581 acgccggcgg acctcctggc cgagcccaag gccccggacg agatgcgcta cgccgagctg
     2641 ggccgctaca tcgacgcgct caagcgatcg ggcaacgacg ccaacaagct catcgtggag
     2701 caggcgctca agctggcgct cccggcgacc tgcctcatca tcgcgctgtt cggcgcgccg
     2761 ctggcggtcc aggcgccgcg cgcgggcgcg gcggtcggcg tggcgatcag cctgggcacg
     2821 accgtgctgt tcctgctcat gacacagatc atgaaggccg tcggatcggg cggactgatc
     2881 aatcccctgg tcgcggcctg gctgccgaac atggtgt
//
LOCUS       DATIFF010000386         2525 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_358553, whole genome shotgun sequence.
ACCESSION   DATIFF010000386 DATIFF010000000
VERSION     DATIFF010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2525
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_358553"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(255..611)
                     /locus_tag="VLD58_05840"
     CDS             complement(255..611)
                     /locus_tag="VLD58_05840"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSB53855.1"
                     /translation="MPQSFGDYLRQRREELRASDPAFSVRQVAARAGLEPSYLSKIER
                     EEQPPPSEDSIRALATVLKEDPDVLLALAGKVSADLQRIIRSRPRLFADLLRQLRDLP
                     DHAVLRLVREVRDGKW"
     gene            833..1837
                     /locus_tag="VLD58_05845"
     CDS             833..1837
                     /locus_tag="VLD58_05845"
                     /inference="COORDINATES: protein motif:HMM:NF012742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000976 - transcription cis-regulatory
                     region binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HSB53856.1"
                     /translation="MVTIKDVARVAGVSVATVSRVYNNSALVRDETRERVRRVTEELG
                     YSPHGAARSLITSRTHTLGVLLPDLYGEFFSEVIRGIDLASQREGYHLLVSSARQHGR
                     PLEAALQSMRGRVDGLIVMSPDLDAQASRRSLPDRFPVVLLNCPPSDAAYDSLGIANY
                     DGARTMVRHLAGLGHRRIAIINGAEGNFDAAERLRGYRAALKECGLASEPALEFPGDF
                     SEAAGHAAAGLILASAERPTAVFAANDGMAIGALSAFRDAGLRLPADIAIGGFDDIPM
                     ARYVEPALTSMHVDIHALGACATAWLLEALRASNGRELRRETLPTTLVVRRSCGAKSG
                     "
     gene            1875..>2525
                     /locus_tag="VLD58_05850"
     CDS             1875..>2525
                     /locus_tag="VLD58_05850"
                     /inference="COORDINATES: protein motif:HMM:NF025092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HSB53857.1"
                     /translation="MLTRTLVRWLGGALVAVATLFLAPVPVSAQTSTGTIRGYITNQD
                     NSPIAGAEIQAKNVESGVTRSATSGTDGGYTMPGLVPAVYQLSVRHIGSAPQTRQVRV
                     QIGATALENFKLTDQAVELEEVTAVAAAPAVETRTSEVATNISQQQINDLPTPNRNIF
                     DLAALAPGVVTQGDQIGGTRRTFSSGAASADPRGADQVNVFIDGASYKNDLLRGGVV"
BASE COUNT          408 a          884 c          823 g          410 t
ORIGIN      
        1 cgtgagccgt gagccgtgag ccgtgagccg tgagccgtga gccgttagcc gttagccgtt
       61 agccgttagc cgttagccgt tagccgttag ccgttagccg ttagccgtta gccgatggta
      121 ctgcatgcgg tccatcgtgc aagcgcttct gccctgcctc gccactactc ccttctccct
      181 tctcccttct cccttcttac ttcttacttc ttacttctta ctccccccga cccccgaccc
      241 ccgacccaaa agccctacca ctttccgtcc ctcacctccc gcaccaggcg cagcacggcg
      301 tgatcgggca ggtcccggag ctgccggagc aggtcggcga agaggcgggg ccggctccgg
      361 atgatccgtt gcaggtcggc ggagaccttg ccggcgaggg ccaggagcac atccgggtct
      421 tcctttaata ctgtggccag ggcacgaatc gagtcctcgg acggcggggg ctgttcttcc
      481 cgctcgatct tgctgaggta cgagggctcg agtccggccc gggcggccac ctggcggacc
      541 gagaaggccg ggtcggaggc gcggagttct tcgcggcgct ggcggaggta gtcaccgaat
      601 gactggggca tcgtggagta gatactacac actactcacc gatgaacgca agtggggaga
      661 aatgacctgg ccgtctaagc ggctgtagcc cctgagttta gtaaacgttt acatggcgaa
      721 actctagccg tcttgacaaa aatggcgcca atgtaaacga ttacacaccc ctctgccccg
      781 ggtgcgccgc ccccgggacc cggcagcacc agctcgaccc ggtcctttcg aaatggtcac
      841 aatcaaggat gtcgcccggg tggcgggggt ctccgtcgcc acggtctcga gggtctacaa
      901 caacagcgcc ctggtccgcg atgagacccg tgagcgggtc cgccgcgtca ccgaggaact
      961 cgggtacagc ccccacggcg cggcccggag cctcatcacc agccgcaccc acaccctggg
     1021 cgtgctgctc ccggacctct acggcgagtt cttctcggaa gtgatccgcg ggatcgacct
     1081 ggcctcgcag cgcgagggct accacctcct cgtctcgagc gcccgccagc atggtcgccc
     1141 gctggaagcc gcgctgcagt ccatgcgggg acgggtcgac gggctgatcg tgatgtctcc
     1201 cgacctcgat gcccaggcct cgcggcggag cctcccggat cgctttcccg tggtgctgct
     1261 caactgtccg cccagcgatg ccgcgtacga cagtctcggg atcgcgaact acgacggcgc
     1321 ccgcaccatg gtgcgccatc tcgccggcct gggccaccgg cggatcgcga tcatcaacgg
     1381 cgcggaaggc aatttcgacg cggccgagcg gctgcggggg taccgggccg cgctcaagga
     1441 atgcggactc gcgagcgagc cggccctcga gttccccggt gacttcagtg aggcggcggg
     1501 acacgccgcg gccggcctga tcctggcctc ggccgagcgg cccacggcgg tgttcgccgc
     1561 caatgacggg atggcgatcg gggcgctcag cgccttccgg gatgcggggc tccggctccc
     1621 ggcggacatc gccatcggcg ggttcgacga tatcccgatg gcccgctacg tggagccggc
     1681 gctcacctcg atgcacgtgg acatccacgc gctgggcgcc tgtgccacgg cctggctcct
     1741 cgaggcgctg cgcgccagca acggccggga gctccgccgg gaaaccctgc ccaccacgct
     1801 cgtggtgcga cggtcatgtg gtgcaaagag cggctagccg ctcacggtag tccttacccc
     1861 cagggaggag tgcaatgttg acccgtacgc ttgtccgatg gctgggagga gcgctcgtgg
     1921 cggttgccac gctgttcctg gcaccggtcc cggtctcggc ccagacctcg accggaacga
     1981 ttcgcggcta catcaccaac caggacaatt cgccgattgc gggggccgag atccaggcca
     2041 agaacgtcga gtcgggcgtg acccggtccg ccaccagcgg taccgatggc gggtatacca
     2101 tgcccggcct ggtgcccgcc gtctaccagc tgtcggtgcg gcacatcggc agcgcaccgc
     2161 agacccgcca ggtgcgggtc cagatcggcg ccaccgcatt ggagaacttc aagctcactg
     2221 accaggcggt ggagctcgag gaagtgaccg cggtcgccgc cgcgccggcg gtggagaccc
     2281 gcacctcgga ggtcgccacc aacatttccc agcaacagat caacgacctg cccaccccca
     2341 accggaacat cttcgacctc gcggcgctgg ctccgggcgt ggtgacccag ggcgaccaga
     2401 tcgggggcac cagacgcacc ttctcgagcg gcgcggcctc ggccgatccg cgcggggccg
     2461 accaggtgaa cgtgttcatc gacggggcga gctacaagaa cgacctcctc cgcggcggcg
     2521 tggtg
//
LOCUS       DATIFF010000387         1085 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1589089, whole genome shotgun sequence.
ACCESSION   DATIFF010000387 DATIFF010000000
VERSION     DATIFF010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1589089"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..348)
                     /locus_tag="VLD58_05855"
     CDS             complement(<1..348)
                     /locus_tag="VLD58_05855"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HSB53858.1"
                     /translation="MLPDLRPRILSTEQAIRPHVRRTPVVQLSGTELGLDGRDLTLKL
                     ELLQHAGAFKTRGAFSNLLQRPVPPAGVVAASGGNHGVAVAYAASRLGIPAKIFVPRI
                     SSPAKIDRIRGYGA"
     gene            510..>1085
                     /locus_tag="VLD58_05860"
     CDS             510..>1085
                     /locus_tag="VLD58_05860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HSB53859.1"
                     /translation="MHGAHEFLKAITVVLCVAAVTTVLFRRLRQPVVLGYLLAGLIVG
                     PYVPIPLQADRTTVEALSELGVILVMFALGLEFSLRRLVKVGFTAALTAVIESSIMLW
                     LGFLVGGAFGWTSRESIFCGAVVAISSTTIIAKVFDEQQIRGRLRELVLGVLIVEDLI
                     AILLMAVLTAVSTGGGMSSGTLLLSSAKLAAF"
BASE COUNT          142 a          366 c          396 g          181 t
ORIGIN      
        1 cgcgccgtat ccccggatgc ggtcgatctt cgccggtgag gagatgcggg ggacgaagat
       61 cttggccggg atgccgagcc ggctcgcggc ataggccacc gccaccccgt gattcccgcc
      121 cgaggcggcc accaccccgg ccgggggaac gggccgctgc aggaggttgg agaaggcgcc
      181 gcgggtcttg aacgcgccgg cgtgctgcag cagctcgagc ttgagggtga ggtcccggcc
      241 gtcgagcccc agctccgtgc cggagagctg gacgaccggg gtgcgccgga cgtgggggcg
      301 aatggcctgc tcggtggaga ggattcgggg gcggaggtcc gggagcatga ccctggctta
      361 cttcgtcgat tggcgaagtt ccaatacagt tcctccggcc ccggcccggg acagcccgcc
      421 cggctgcgtg ctgcgcccga cggcccgggc gggggtccgt cgggaacact cgccggggct
      481 ccacctccgc tgacacacta cgggcggcga tgcacggggc ccacgagttc ctgaaggcga
      541 tcaccgtcgt gctctgcgtg gcggcggtga ccaccgtcct cttccgcagg ctccggcagc
      601 cggtggtgct cggctacctc ctcgccggcc tcatcgtggg gccctacgtc ccgattcccc
      661 tccaggcgga tcggaccacc gtcgaggcgc tctccgagct gggagtgatc ctggtgatgt
      721 tcgccctggg cctggagttc agcctccgca ggctggtgaa ggtgggattc accgccgcgc
      781 tcaccgccgt catcgagtcg agcatcatgc tctggctcgg cttcctggtg ggcggtgcgt
      841 tcggctggac cagccgagag agcatcttct gcggcgcggt ggtcgccatc tccagcacca
      901 ccatcatcgc caaggtgttc gacgagcagc agatccgggg gaggctccgc gagctggtgc
      961 tgggggtgct catcgtcgag gacctgatcg ccattctcct gatggcggtg ctcaccgccg
     1021 tctccaccgg aggggggatg tcctccggga cgctgctgct ctcgagcgcg aagctggcgg
     1081 ccttc
//
LOCUS       DATIFF010000388         1964 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1435803, whole genome shotgun sequence.
ACCESSION   DATIFF010000388 DATIFF010000000
VERSION     DATIFF010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1964)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1964)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1964
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1435803"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..282)
                     /locus_tag="VLD58_05865"
     CDS             complement(<1..282)
                     /locus_tag="VLD58_05865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53860.1"
                     /translation="MNARVADRGDPPGKVAGTIGTVLVHAAAAAFLFTQARSGPPSPP
                     VYAVELLAAPAPAPKQRVAREAVPTPPPPEKPAPVKPQPKPKPTKTAPVP"
     gene            complement(279..710)
                     /locus_tag="VLD58_05870"
     CDS             complement(279..710)
                     /locus_tag="VLD58_05870"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ExbD/TolR family protein"
                     /protein_id="HSB53861.1"
                     /translation="MSASLGGGLGSQRGELPLMADVNVTSLVDVMLVLLIIFMLTAPI
                     MQGGVDVELPRAEARPLSPKEGMVVTVNREGRIFIDQTPVSYRDFRVTFRSLVATRKP
                     TGVYLQADERVPYGEVVRVLAVIRGAGIQNVGLVAADEASS"
     gene            complement(712..1425)
                     /locus_tag="VLD58_05875"
     CDS             complement(712..1425)
                     /locus_tag="VLD58_05875"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HSB53862.1"
                     /translation="MILQAGGAVPRTPIELVLSASLETKIVLIITAIFSLVSWFIIIL
                     KWWQFRRLNRQADRFFAEMERTTRLQDAYHAVMKQPPSPYNRLFREAITFYSELRPGA
                     LREERGADRSSLSMTQLEALKMVLGKEVAAERDLLGHYIPWLATIGSVSPLLGLLGTT
                     VGIINAFTGIATKGSGNLAAVAPGVAEALVATFAGLAAAIPAVITYNLYVNRTRLFAG
                     ELEGFANELIGTMAREGLI"
     gene            complement(1422..>1964)
                     /locus_tag="VLD58_05880"
     CDS             complement(1422..>1964)
                     /locus_tag="VLD58_05880"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSB53863.1"
                     /translation="KLPISPYGVSKLSGEYYLRALAALRGFEGVAMRYANVFGPRQDP
                     KSEAGVVSIFVSRLLAKQKLTIFGDGRQTRDYVFVRDVARANVLASTAAIPPGGDLDA
                     PAINIATGTQRSVLDLAESVGQVMGMKPELEFAPPRPGELFRSSLAIGKAKAVLGWAP
                     EVPFDDGLRALIEWFRQEAR"
BASE COUNT          297 a          670 c          701 g          296 t
ORIGIN      
        1 gggcaccggc gcggtcttgg tcggcttggg cttgggctgc ggcttcaccg gggccggctt
       61 ctcggggggt ggcggcgtcg gcaccgcctc ccgggccacc cgctgcttcg gcgccggcgc
      121 cggcgcggcc aggagctcga ccgcgtagac cggcggggac ggcggcccgc tgcgcgcctg
      181 ggtgaacaga aaggccgcgg cggccgcgtg caccagcacg gtgccgatcg tcccggccac
      241 cttgccgggc ggatcgcccc gatcggccac ccgcgcgttc acgacgatgc ttcgtccgcg
      301 gcgacgagtc cgacgttctg gattccggcc ccgcggatca cggccagtac ccggacgacc
      361 tctccatagg gcacccgctc gtccgcctgg aggtacactc cggtgggctt gcgggtggcg
      421 accaggctgc ggaacgtcac ccgaaaatcg cggtaggaga ccggggtctg gtcgatgaag
      481 atccggcctt cccgattcac ggtgaccacc atcccttcct tgggcgacag cgggcgggct
      541 tcggcccttg gcagctcgac gtcgacgccg ccctgcatga tcggtgccgt gagcatgaag
      601 atgatcagca gcaccagcat cacgtctacc agcgaggtga cgttgacgtc ggccatgagc
      661 gggagctccc cgcgctggct tcccagtcct cccccgaggc tcgcggacat atcagatgag
      721 tccttcccgc gccatcgtcc cgatcagctc gttggcgaag ccctcgagct ccccggcgaa
      781 gagccgggtc cggttgacgt agaggttgta ggtgatcacg gcggggatgg ccgccgccag
      841 gccggcgaag gtggcgacca gcgcttcggc cacgcccggc gccaccgcgg cgaggttgcc
      901 cgagcccttg gtggctatcc cagtgaatgc gttgatgatg ccgaccgtcg tgccgagcag
      961 gccgagcagc gggctgaccg acccgatggt ggcgagccag gggatgtagt gccccagcag
     1021 gtcccgctcc gccgcgacct cctttcccag caccatcttg agcgcctcga gctgggtcat
     1081 ggagagcgag ctgcggtcgg ccccgcgctc ctcccggagc gcgccgggac ggagctcgga
     1141 atagaaggtg atcgcctcgc ggaacagccg gttgtagggc gagggaggct gcttcatcac
     1201 cgcgtggtag gcgtcctgga gccgggtggt ccgttccatc tcggcgaaga agcggtcggc
     1261 ctgccggttg agccgccgga actgccacca cttgagaatg atgatgaacc aggagaccag
     1321 ggagaagatg gcggtgatga tgaggacgat cttggtctcg agactggccg agagcaccag
     1381 ctcgatcggg gtccggggaa ccgcgccgcc ggcttgcagg atcatcgggc ctcctgtcgg
     1441 aaccattcga tcagcgcgcg gagcccgtcg tcgaagggga cctccggcgc ccaccccagg
     1501 accgccttgg ccttgccgat cgcgagcgag ctgcggaaca gctcgccggg ccggggcggc
     1561 gcgaactcca gctccggttt catgcccatg acctgaccca ccgactcggc cagatccagg
     1621 acgctgcgct gggtcccggt cgcgatgttg atcgccggcg cgtcgaggtc gccgcccggc
     1681 gggatggccg cggtgctcgc gagcacgttg gcccgggcca cgtcccggac gaagacgtag
     1741 tcccgggtct gccggccgtc accgaagatg gtcagcttct gcttggccag gagccgggag
     1801 acgaagatcg agaccacccc cgcctccgac ttcggatcct gccgggggcc gaagacgttg
     1861 gcgtaacgca tcgcgacacc ctcgaagccc cgcagcgcgg ccagggcccg gaggtagtac
     1921 tcgcccgaga gcttgctgac cccgtagggc gagatgggga gctt
//
LOCUS       DATIFF010000389         1437 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_974566, whole genome shotgun sequence.
ACCESSION   DATIFF010000389 DATIFF010000000
VERSION     DATIFF010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1437
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_974566"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..841
                     /locus_tag="VLD58_05885"
     CDS             <1..841
                     /locus_tag="VLD58_05885"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HSB53864.1"
                     /translation="LVILGGGTVGTARLLLASSRGLPNLSEHVGRHIAFNGSVKAAAI
                     LPDDIPDGDMYAGRSHPGMISYEFLESRGITISTVKPLPVQMMAAGRLRLAGMRAEQE
                     WWGADHLALMQQVRHRMIILLSLGLTPPAGRLTLDAEGEPHLEVDELGALAAYEKSVE
                     SLLRSILDRNGCRPVSVEAVDRAGMPHPGTYFSSAHQTGSCRMADSPGMGVVDVNGEV
                     FGHPGLFVTDGAAIPSSLAVNTSLTVLANAERIAAGIVARYGRTPAVEPGAPPLVARA
                     AGQ"
     gene            complement(848..>1437)
                     /locus_tag="VLD58_05890"
     CDS             complement(848..>1437)
                     /locus_tag="VLD58_05890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003771338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GMP synthase (glutamine-hydrolyzing)"
                     /protein_id="HSB53865.1"
                     /translation="FLVQGTLYPDVIESTSATGGPSVTIKTHHNVGGLPERLPFKLIE
                     PLRELFKDEVRQVGRELGLPEEMVGRHPFPGPGLAIRILGEVTRPELDILRAVDAIYI
                     EEIRAAGLYDDIWQAFAVLLPIRSVGVQGDFRTYDQAVALRAVTSRDGMTADWFPFPH
                     DVLAHISSRIGNEVKGVNRVVYDVSSKPPATIEWE"
BASE COUNT          212 a          488 c          507 g          230 t
ORIGIN      
        1 cctcgtgatc ctgggcggtg gcacggtcgg gaccgcacgg ctgcttctcg cgtcctcccg
       61 cggcctgccg aatctgagcg agcacgttgg gcggcacatc gccttcaatg gaagcgtcaa
      121 ggcggcggcg atcctcccgg acgacatccc ggacggcgac atgtacgccg gccgttcgca
      181 tcccggcatg atcagctacg agtttctgga gtcacgcggc atcaccatct cgaccgtcaa
      241 gccgctcccg gtccagatga tggcagcggg acgcctgcgc ctggccggga tgagggcgga
      301 gcaggagtgg tggggcgcag accacctcgc cctgatgcag caggtgaggc atcgcatgat
      361 catcctgctc agcctggggc tgacgccgcc ggcgggccgg ctcacgctcg acgcggaggg
      421 tgagccgcat ctcgaggtgg atgagcttgg tgcgctggcc gcctacgaga agtcggtcga
      481 gagcctgctt cgctcgatcc tggatcgcaa cgggtgccgg ccggtgtccg tggaggcggt
      541 cgaccgggcc ggcatgccgc atccgggcac gtatttctcc tcggcccacc agactggctc
      601 gtgccggatg gcggactcgc ccgggatggg cgtcgtggat gtgaacggag aggtattcgg
      661 ccacccgggg ctgttcgtga ccgacggtgc ggcgattccc tcatcgctgg ccgtcaacac
      721 cagcctcacg gtcctggcga atgcggagcg cattgccgcc ggcatcgtcg cccgatacgg
      781 caggaccccg gcggtcgaac cgggtgcgcc gccgctcgtg gcgcgggccg caggccaatg
      841 aggctggcta ttcccactcg atcgtggcgg ggggcttgct gctcacgtcg tacaccacgc
      901 ggttgacgcc cttcacctcg ttgccgatcc ggctggaaat gtgcgccagc acgtcgtgcg
      961 ggaaggggaa ccagtcggcc gtcatcccgt cgcggctggt gaccgcccgg agcgccaccg
     1021 cctggtcgta ggtgcggaag tccccctgca cgccgaccga gcggatcggc agcagcaccg
     1081 cgaaggcctg ccagatgtcg tcgtacagcc ccgccgcgcg gatctcctcg atgtagatgg
     1141 cgtccacggc gcggagaatg tcgagctcgg gccgggtgac ctcgccgagg atccggatgg
     1201 cgagcccggg cccggggaac ggatgccggc ccaccatttc ctccggcagg ccgagttccc
     1261 gacccacctg ccgcacctcg tccttgaaca gctcgcgcag cggctcgatg agcttgaacg
     1321 ggagccgctc cggcagcccg cccacgttgt ggtgggtctt gatggtgacc gacggccccc
     1381 ccgtcgcgga ggtggactcg attacgtcgg ggtagagggt cccctgcacc agaaatc
//
LOCUS       DATIFF010000390         2302 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_51717, whole genome shotgun sequence.
ACCESSION   DATIFF010000390 DATIFF010000000
VERSION     DATIFF010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2302
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51717"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1625)
                     /locus_tag="VLD58_05895"
     CDS             complement(<1..1625)
                     /locus_tag="VLD58_05895"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HSB53866.1"
                     /translation="MSAPAAAVSRSGRLETAEALEAYVARYRWIILLGLITAAIMEVL
                     DTTIINVALPQMAGNLGATQEEIGWVSTGYILSNVVFLPMTAFFAERFGRQRYLTFSI
                     ILFIVASFFCGTSNSLIELVFWRVLQGAGGAALLSTAQATIRQIFPREQQGMVQAIFL
                     LGIIVAPTLGPTLGGWITDNYQWHWCFFINIPIGIAATFLVGNFLKDPPGHRRQGGGV
                     DWLGIGLLSVGLAALQYVLEEGRSEDWFESTLIIRLAAVAAVCLVGMLWWELTPRNPH
                     PVVNFRVLHNRDLAASIFLFVALGFALYGGTFIFPLFTQSILRFTPTETGLALLPGGL
                     ATACSALICGTLLNGAKPKADARVLIGIGVCLLLWAMWDLGHLSVDAGEGDVRWALLI
                     RGAGLGMLFTPINNVAYASLKPSEAQQASGLINLSRQLGGSFGIALLATYVTSHTQIH
                     RADLVSNVYPGNPLVEQRLQGFMANLLAHGYSPDAARQAAYAILDQQVTRQSAMLSYN
                     DAWMLLLLTFLVVSPAIILLRKPKGRAATVDAH"
     gene            complement(1622..>2302)
                     /locus_tag="VLD58_05900"
     CDS             complement(1622..>2302)
                     /locus_tag="VLD58_05900"
                     /inference="COORDINATES: protein motif:HMM:NF024587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidylate kinase-like family protein"
                     /protein_id="HSB53867.1"
                     /translation="PRGRRRRPPLAPLMGREPIRIITLSREYGAGGSELGVLLGKELG
                     WPVLDRDLAHRLAERLRCASDDVLANEERAPSFLERIAAAFTVVPSDAPILPDLNQSP
                     DPDTLVEATRAVLREAVRTPPLVVIGHGANCLLHDRRDVLRLRVTAPYPVRVKRVAQR
                     TGQPEHEAAADVRHRDADRRHYLDRYYRKDTNDPCLYDLQINSATIPLETAARMVMLL
                     VRGESART"
BASE COUNT          368 a          784 c          828 g          322 t
ORIGIN      
        1 tagtgggcgt ccaccgtcgc cgcccggcct ttcggcttcc gcagcaggat gatggccggc
       61 gacaccacca ggaaggtcag cagcagcagc atccaggcgt cgttgtagct cagcatcgcc
      121 gactggcggg tcacctgctg gtcgaggatg gcgtaggccg cctggcgcgc cgcgtccgga
      181 ctgtagccgt gcgccaacag gttggccatg aacccctgga gccgctgctc caccaggggg
      241 ttgccgggat agacattgct caccaggtcg gcccggtgga tctgggtgtg gctggtgacg
      301 taggtcgcca gcagggcgat cccgaacgag ccgcccagct gccgggagag gttgatcagc
      361 ccggacgcct gctgcgcctc actcggcttc aggctggcgt aggcgacgtt gttgatcggg
      421 gtgaacagca tccccaggcc ggcgccgcga atcaggagcg cccagcgcac gtcgccctcg
      481 ccggcatcca cgctcaggtg ccccaggtcc cacatcgccc agagaaggag gcacaccccg
      541 atcccgatca gcacccgcgc gtcggccttg ggcttcgccc cgttgagcag ggtgccgcag
      601 atcagggccg agcaggccgt ggccagcccg cccggcagca gcgccaggcc ggtctcggtc
      661 ggggtgaacc ggaggatgct ctgggtgaag agcgggaaga tgaacgtgcc cccgtagagc
      721 gcgaagccga gggcgacgaa caggaagatc gacgccgcga ggtcgcggtt atgcagcacc
      781 cggaagttga ccaccggatg ggggttcctc ggggtcagct cccaccacag catccccacc
      841 aggcagaccg ccgccaccgc cgccaggcgg atgatcaggg tgctctcgaa ccagtcttcc
      901 gaccgtccct cttccagcac gtactgcagg gcggcgagcc cgaccgacag cagcccgatg
      961 cccagccagt ccaccccccc gccttgccgc cggtgccccg gtgggtcctt caggaagttg
     1021 cccaccagga aggtggcggc gatgccgatc gggatgttga tgaagaagca ccagtgccac
     1081 tggtagttgt cggtgatcca cccgcccagc gtgggcccca gcgtcggcgc cacgatgatc
     1141 ccgagcagga agatcgcctg caccatcccc tgctgttcgc gggggaagat ctgccggatc
     1201 gtcgcctggg cggtggagag cagggccgcg cctccggcgc cctggagcac ccgccagaac
     1261 accagctcga tgagggagtt cgaggtgccg cagaagaacg acgcgacgat gaacaggatg
     1321 atcgagaacg tcaggtaccg ctgccggccg aaccgctcgg cgaagaacgc ggtcatcggc
     1381 aggaagacca cgttgctcag gatatagccg gtgctgaccc agccgatctc ctcctgggtg
     1441 gcgcccaggt tgccggccat ctgcggcagc gccacgttga tgatggtggt gtcgagcacc
     1501 tccatgatcg ccgcggtgat gagccccagc aggatgatcc agcggtagcg ggcgacgtag
     1561 gcctcgagcg cttcggcggt ctccaggcgg ccggagcggg agaccgcggc ggcgggcgcg
     1621 ctcacgtccg ggcggactcg ccccggacca gtagcatcac catccgggcg gcggtctcca
     1681 gcgggatcgt ggcgctgttg atctggagat cgtacaggca gggatcgttg gtgtccttgc
     1741 ggtagtagcg gtcgaggtag tggcgccggt cggcatcccg gtggcgcacg tccgcggccg
     1801 cctcgtgctc cggctgcccg gtgcgctgcg ccacccgctt gacccgcacc gggtacgggg
     1861 cggtgacccg gagccggagc acgtcccgcc ggtcgtggag caggcagttg gcgccatggc
     1921 cgatcacgac cagcggcggc gtgcggacgg cctcccgcag caccgcgcgg gtggcctcca
     1981 ccagggtgtc gggatcaggg gactggttga ggtcggggag gatcggcgca tcgctgggca
     2041 ccacggtgaa cgcggcggcg atgcgctcca ggaagctcgg cgcccgctcc tcgttggcca
     2101 gcacatcgtc gctggcgcaa cggagccgct ccgccagacg gtgcgccaga tcgcggtcga
     2161 gcaccggcca gccgagctcc ttgcccagca gcaccccgag ctcgctcccg cccgcgccgt
     2221 actcgcggga gagggtgata atccggatcg gctcgcgccc catgagaggt gctaggggcg
     2281 ggcggcggcg ccgcccgcgg gg
//
LOCUS       DATIFF010000391         1721 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1743281, whole genome shotgun sequence.
ACCESSION   DATIFF010000391 DATIFF010000000
VERSION     DATIFF010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1721
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1743281"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1039
                     /locus_tag="VLD58_05905"
     CDS             <1..1039
                     /locus_tag="VLD58_05905"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HSB53868.1"
                     /translation="IPIAVLGGVFAPDLLRLMGAAPEVVATGSGFTRVMFSGNFVILL
                     LFLINAIFRGAGDAAIAMRSLWIANICNMILDPLLIFGIGPFPRLGVQGAAFATTVGR
                     GMGVLYQFYRLAGEGKRFAIHREHLKVEIPILSAMLRLSGTGIFQILIGTASWVGLVR
                     VISSFGSQALAGYTVGIRIFLFALLPSWGMANAAATMVGQSLGARKPDRAEQAVWLAG
                     FYNLCFLGSVGILFVILAPVLLPLFSHDPEVVRIGVQCLRIVSAGFPFYAYGMVLTNA
                     FNGAGDTWTPTLINLFCFWCWEIPLAWVLAKTVGMGPAGVFIAVAVAFSTLAVISAVL
                     FRRGRWKGRRV"
     gene            complement(1036..>1721)
                     /locus_tag="VLD58_05910"
     CDS             complement(1036..>1721)
                     /locus_tag="VLD58_05910"
                     /inference="COORDINATES: protein motif:HMM:NF012861.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HSB53869.1"
                     /translation="ILVVKSLIWATSLGSGTSGGVLAPLLMIGGALGGLEARIFPAEG
                     AGFWPLVSMAAVLGGTMRAPFTAVVFGLELTHDLTALVPLLLAAVVAHAFTVLTLPRS
                     ILTEKVARRGLHLSREYAVDPLEILLVRDVIDPGVPPGAQGTAPTVSIRPDAPLRVAA
                     YRMAEMGLSRIPVVHPDNAGIIVGVLTLEDLLKARAANLDAESRRERHLSLWDLVTPR
                     IAGDGPPDA"
BASE COUNT          228 a          627 c          577 g          289 t
ORIGIN      
        1 gatcccgatc gcggtgctcg ggggcgtctt cgcgcccgac ttgctccgcc tcatgggcgc
       61 cgcccccgag gtcgtggcca ccggctccgg cttcacccgg gtgatgttct cggggaactt
      121 cgtcatcctg ctcctgttcc tcatcaacgc gatcttccgc ggcgccggcg acgcggcgat
      181 cgcgatgcgc tcgctctgga tcgcgaacat ctgcaacatg attctcgatc ccctcctgat
      241 cttcgggatc gggcccttcc cccggctcgg ggtccagggc gccgccttcg ccaccaccgt
      301 cggccgcggc atgggcgtgc tctaccagtt ctaccggctg gccggggaag ggaagcgctt
      361 cgcgattcac cgggagcacc tgaaggtgga gattccgatc ctctccgcga tgctccgcct
      421 ttccggcacc gggatcttcc agatcctgat cgggaccgcc agctgggtcg ggctggtgcg
      481 ggtcatctcc tcgttcggga gccaggcgct cgccggatac accgtcggga tccggatctt
      541 cctcttcgcc ctgctcccct cctggggcat ggccaacgcc gccgcgacga tggtgggaca
      601 atcgctgggc gcccggaagc cggaccgggc cgagcaggcc gtctggctcg ccgggttcta
      661 caacctctgc ttcctcggca gcgtcgggat ccttttcgtg attctggccc cggtcctcct
      721 tccgctcttc tcccacgacc ccgaagtggt gcggatcggg gtgcagtgtc tccgcatcgt
      781 gagcgccggc ttcccgttct acgcctacgg gatggtcctc accaacgcct tcaacggcgc
      841 gggcgacacc tggacgccga cgctcatcaa cctcttctgc ttctggtgct gggagatccc
      901 cctggcgtgg gtgctcgcga agacggtggg gatgggaccg gccggcgtgt tcatcgccgt
      961 ggccgtcgcc ttctcgacgc tggcggtcat cagcgcggtc ctgttcaggc ggggccgctg
     1021 gaaggggcgg cgggtctagg cgtccggcgg cccgtcgccc gcgatccgcg gggtgaccag
     1081 atcccagagg gagaggtgcc gctcccgccg gctttccgcg tcgaggttgg ccgcgcgggc
     1141 cttgagcagg tcctccaggg tcaggacccc gacgatgatc ccggcgttgt cggggtgcac
     1201 caccgggatc cggctgaggc ccatttccgc cattcggtag gcggccaccc ggagcggcgc
     1261 gtcgggccgg atgctcaccg tgggcgccgt cccctgggca cccggtggca cgccggggtc
     1321 gatcacgtcg cgcacgagga gaatctccag cggatccacc gcgtactccc ggctcaggtg
     1381 gagtccccgc cgcgccactt tctccgtcag gatggaacgg ggcagcgtga gcacggtgaa
     1441 ggcatgcgcc accaccgcgg cgaggaggag cggaaccagc gcggtgaggt catgggtgag
     1501 ctcgaggccg aagaccacgg ccgtgaacgg cgcccgcatg gtcccgccga gcaccgccgc
     1561 catgctcacc agcggccaga accccgcgcc ctcagccggg aagatccgcg cctcgaggcc
     1621 cccgagcgcc ccgccgatca tgagcagcgg cgccagcacg ccccccgacg tccccgagcc
     1681 gagcgatgtc gcccagatca gcgacttcac gaccagaatc c
//
LOCUS       DATIFF010000392         1143 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_666726, whole genome shotgun sequence.
ACCESSION   DATIFF010000392 DATIFF010000000
VERSION     DATIFF010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_666726"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..228
                     /locus_tag="VLD58_05915"
     CDS             <1..228
                     /locus_tag="VLD58_05915"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012320489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HSB53870.1"
                     /translation="QALREIPAGSTATYAEIAARIGAPNSVRAVAGACAANSLAVAIP
                     CHRVIRADGGLSGYRWGVERKRRLLQREAQA"
     gene            225..944
                     /locus_tag="VLD58_05920"
     CDS             225..944
                     /locus_tag="VLD58_05920"
                     /inference="COORDINATES: protein motif:HMM:NF021385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase"
                     /protein_id="HSB53871.1"
                     /translation="MTALARASALPPAVEWDGVARDLDAWGCAVLAGLLQPDECRELA
                     GQYSDDARFRSRIVMERHGFGRGEYKYFDYPLPELVEGLRAAVYARLAPIANRWNEAM
                     GTAVRYPATHADFLARCHRAGQNKPTPLLLRYVAGDYNCLHQDLYGEHVFPLQLAILL
                     SDPGRDFGGGEFVMTEQRPRMQSRAEVVPLGLGDGVVFAVSHRPVRGARGVYRVNLRH
                     GVSRIRWGTRHTIGIIFHDAK"
BASE COUNT          162 a          382 c          414 g          185 t
ORIGIN      
        1 caggcgctcc gcgagatccc cgcgggctcg acggccacct acgccgagat cgccgcccgg
       61 atcggggcac cgaactcggt gcgggcggtg gcgggtgcct gcgcggccaa ctcgctggcg
      121 gtggcgattc cctgccatcg cgtgatccgc gccgacggcg gactctcggg ctatcgctgg
      181 ggcgtcgagc ggaagcggcg actgctccag cgggaagcac aggcatgacc gcgttggcgc
      241 gggcctccgc ccttcccccc gcggtggagt gggatggcgt cgcgcgagac ctggacgcct
      301 gggggtgcgc ggtgctcgcc gggctgttgc agccggacga gtgccgggag ctcgccggac
      361 agtattcgga tgacgcgcgc ttccggagca ggatcgtgat ggagcgccac ggattcgggc
      421 ggggcgagta caagtacttc gattatccgc tgcccgaatt ggtcgagggc ctgcgagccg
      481 ccgtgtacgc ccggctggcg ccgatcgcca accgctggaa cgaggccatg ggaacggcgg
      541 tgcggtatcc ggcgacccac gccgacttcc tcgcgcgttg ccatcgggca gggcagaaca
      601 agccgacgcc acttctgctc cggtacgtgg ccggggacta caactgcctg caccaggacc
      661 tttacgggga gcacgtattc ccgctgcagc tcgccatcct gctgtccgat ccgggacgcg
      721 atttcggggg cggggaattc gtgatgacgg aacagcgccc gcggatgcaa tcgcgggcgg
      781 aggtggtgcc actggggctg ggcgacgggg tggtcttcgc ggtgagtcac cggccggtgc
      841 gtggtgctcg gggggtctac cgggtcaacc tgcggcatgg ggtcagccgg atccgctggg
      901 gcacccgcca cacgatcggg atcatcttcc acgacgcgaa gtagttggat gtgcgcgact
      961 tatggccctg cgatcggcgg gtggccctcg gccggtggcc gcccccgtta gctggagata
     1021 cctagatcta tagccgttgt taatgctact acgtgggcgc cgccggcttc gagcgcttcc
     1081 ctgcccccct gaccccggtc aaccacggcc aacactccca agaccctccc cccggccgtt
     1141 tcc
//
LOCUS       DATIFF010000393         1157 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2052575, whole genome shotgun sequence.
ACCESSION   DATIFF010000393 DATIFF010000000
VERSION     DATIFF010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1157
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2052575"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..351
                     /locus_tag="VLD58_05925"
     CDS             <1..351
                     /locus_tag="VLD58_05925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53872.1"
                     /translation="VGGMIDIAPTIMDLLGDPLPESWQGRSLFDDDRPGRVYLFSPHS
                     RVLFGYREGPRKYIYDAGGNTSELYDLRTDPGESLNVAVGSPAMVLQSEQRLATWVQY
                     QQRFFEGILVRDSR"
     gene            534..737
                     /locus_tag="VLD58_05930"
     CDS             534..737
                     /locus_tag="VLD58_05930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53873.1"
                     /translation="MQPTELVAVIAAIIYSGRTSGAGKKTADAIAKAQAEAVGEAWQL
                     WHLTLEQWTDSGARQFPDPNLHP"
     gene            complement(750..>1157)
                     /locus_tag="VLD58_05935"
     CDS             complement(750..>1157)
                     /locus_tag="VLD58_05935"
                     /inference="COORDINATES: protein motif:HMM:NF021214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HSB53874.1"
                     /translation="SLAVYNGVLALTHIPAVVDGLMPSQLGAAAVDLAWLGAGLALWL
                     PVLHPDPRRRLALPLRILYLFASTLFPTAPAAFLTFADYPLYSLYELAPRVSGISARS
                     DQVVAGLLMKLAADPPVWVAMAVIFFRWQKEDA"
BASE COUNT          205 a          398 c          387 g          167 t
ORIGIN      
        1 gtcggcggca tgattgacat tgcgccgacg atcatggacc tcctcggcga tccgctgccc
       61 gagtcatggc agggacgcag cctgttcgac gacgaccggc ccgggcgcgt ttacctcttc
      121 agccctcact cgagggtgct cttcggctat cgcgagggac cgcgcaagta tatctacgac
      181 gcgggtggca acacctcgga gctttatgac ctacggaccg acccgggtga gtcgctgaac
      241 gtcgccgtgg gatcccccgc catggtcctc caaagcgaac agcggcttgc tacctgggtt
      301 cagtatcagc agcggttctt tgaaggcatc ctcgtgcggg actcacgctg acttcacgcg
      361 ccctggggtg ccccgggcct aaccgccctc ctcctgccgt cggaggcccc tcggcgcggc
      421 tcggtgcgag ttgggcggcg cgtgggagag cttgaggttc tcggaaccat cgcctgcacg
      481 atctacaacg gcgcgctaac gccgcttcgt caaggcctct acccggagac ggaatgcaac
      541 ccaccgagct ggtcgcggtc atcgcggcca tcatctacag cggccgcacc tcgggcgcag
      601 ggaagaagac ggccgatgcg atcgccaagg cgcaggcgga ggccgtcggc gaagcctggc
      661 agctctggca cctcaccctg gagcagtgga ccgactccgg cgcgcgccag ttccccgacc
      721 ccaacctgca tccgtgagcc gcgaggcttc taggcgtcct ccttctgcca gcggaaaaag
      781 atcaccgcca tcgccaccca gaccggcgga tcggccgcga gcttcatgag cagcccggcc
      841 acgacctgat ccgaccgggc ggaaatgccc gaaacgcgcg gcgccagctc gtagaggctg
      901 tagagcgggt agtcggcgaa cgtgaggaag gctgccggcg ccgtcgggaa gagtgtggac
      961 gcgaagaggt acaggatccg gagcggcagc gcgagccgcc gccggggatc gggatgcaac
     1021 accgggagcc agagcgccag gcccgccccg agccaggcca gatccaccgc cgcggcgccg
     1081 agctggctcg gcatgaggcc atccaccacc gcggggatgt gagtcagggc gagcaccccg
     1141 ttgtacaccg ccagtga
//
LOCUS       DATIFF010000394         1509 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_666914, whole genome shotgun sequence.
ACCESSION   DATIFF010000394 DATIFF010000000
VERSION     DATIFF010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_666914"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..505
                     /locus_tag="VLD58_05940"
     CDS             <1..505
                     /locus_tag="VLD58_05940"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ubiquinone/menaquinone biosynthesis
                     methyltransferase"
                     /protein_id="HSB53875.1"
                     /translation="ATLGRQPGFGGRVIGADFVLPMLRLGEGKSRRVEPVNADALELP
                     FADRSFDGATVGFGIRNLADLDAGLAEAARVLKPGARLVVLEFTTPPRQPLRGLYFFY
                     FRRVLPLVGRMVSHHGDAYTYLPESVLAFPEPEELAARMRRAGLEPVSYTLLCGGICA
                     IHVGTRV"
     gene            505..1392
                     /locus_tag="VLD58_05945"
     CDS             505..1392
                     /locus_tag="VLD58_05945"
                     /inference="COORDINATES: protein motif:HMM:TIGR01475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA-like polyprenyltransferase"
                     /protein_id="HSB53876.1"
                     /translation="MEGQTFAGESLLVRYVNFVKLPHTLFALPFALLGVLQASREASV
                     TWRIVALVVVAFSAARWVAMGFNRIADREFDARNPRTRARELPRGALTLRQAWVSVAF
                     AAVLFVASAWLLNPLCFRLSPLALGWVMLYSLSKRFTWWPHLWLGLSLAIAPVGGYLA
                     VTGRWSEPWWVLVSVTIAVATWVAGFDIFYALPDAAFDRSEGLRSAVVRLGERRSILL
                     AKLLHGVTIPGLVAFGVGAGFGPWYFGGVIAAALILVYEHHLVKPGDLSRLDAAFFTM
                     NGVMSVTVFGFALVDRLVG"
BASE COUNT          179 a          481 c          554 g          295 t
ORIGIN      
        1 cgccaccctc ggccggcagc cgggcttcgg aggccgggta atcggcgccg atttcgtgct
       61 cccgatgttg cgtcttggcg agggcaagtc ccggcgcgtc gagcccgtga acgccgatgc
      121 actggagttg ccgttcgcgg accgttcctt cgacggggcc acggtcggct tcgggatccg
      181 gaatctggcc gacctggatg ccggccttgc ggaagccgcc cgggtactca agccgggcgc
      241 ccggctggtt gtcctggagt tcaccacgcc tccacggcag ccgctccggg gcctctactt
      301 cttctatttc cgaagggtcc tgccgctggt gggtcggatg gtgtcccacc acggcgatgc
      361 ctatacctac cttccggagt cggtgctcgc ctttcccgag cctgaagagc tcgcggcccg
      421 gatgcggcgg gcggggctcg agccggtgtc gtataccctc ctgtgcggcg ggatctgcgc
      481 gattcacgtg gggacgaggg tctgatggaa ggccagacct ttgccggcga gtcgctcctc
      541 gtccggtacg tgaacttcgt caaactgccc catacgctct ttgcgctgcc gttcgcactg
      601 ctgggcgtgc tgcaggcctc gcgcgaagcc agcgtgacct ggcgcatcgt ggcgctggtg
      661 gtggtcgcgt tcagcgcggc ccgttgggtg gcgatgggct tcaaccggat cgcagaccgg
      721 gaattcgatg cccgcaaccc gcggacccgg gctcgggagc tgccgcgggg agcgcttacc
      781 ctgcgccagg cgtgggtctc ggtcgcgttc gccgccgtgc tgttcgtggc ttccgcatgg
      841 ctgctgaacc cgctctgctt ccggctctcc ccgctggcgc tcgggtgggt gatgctctac
      901 agcctgagca aacggttcac ttggtggccg catctgtggc tgggtctgtc cctcgcgatc
      961 gcgccggtgg gcgggtacct cgcggtgacc gggcgctgga gcgagccctg gtgggttctc
     1021 gtatcagtca cgatcgccgt ggccacctgg gtggcggggt tcgacatctt ctacgcgctc
     1081 cccgacgccg ccttcgaccg gagcgagggg ctccggagcg cggtggtgcg gctgggcgag
     1141 cgccggagca ttctgctcgc caagctgctg cacggggtga cgatccccgg actggtggcc
     1201 ttcggcgtcg gcgccggatt cggcccctgg tacttcggcg gcgtgatcgc cgccgcgctc
     1261 atcctggtgt atgagcatca cctggtgaag ccgggcgacc tctcccggct ggacgcggcg
     1321 ttcttcacca tgaacggggt catgagtgtg acggtgttcg ggtttgcgct ggtggatcgg
     1381 ttggtggggt gagaggtgag cagtgagcag tgaacggtga gcagtgagcc gtgagcgcgt
     1441 ggccgggtat ggggtagggc ggcgagtccc gtcgccggac ggatcgcggc ataaagccgc
     1501 tcctacagc
//
LOCUS       DATIFF010000395         2808 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_206574, whole genome shotgun sequence.
ACCESSION   DATIFF010000395 DATIFF010000000
VERSION     DATIFF010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2808
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_206574"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..967)
                     /locus_tag="VLD58_05950"
     CDS             complement(<1..967)
                     /locus_tag="VLD58_05950"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSB53877.1"
                     /translation="MKAKFTVISGARAGQTSVFSQNYICIGRHPQCELQFDPDKDLDV
                     SSRHAAVSLEGMLYVLRDLGSTNGTFVNGRRLSTDHVLASKDVVRFGQAGPEVEFAAI
                     GDTRPVVPPVASAQQGGTVVFGMQEQPEPEPPPKPKPRPERFQNPRPTPGPGTTTRVQ
                     IAVKKETKGLRRTTLILFGLLVVMSGAYLWEARTTGQRLREQREMLVGRVDSLMQQMA
                     ALSAGNEGLRSALDSAVGEATRLRKQLTEASPTDQVQMAELRRRLDAAMRQQRNLAGA
                     ARLNAAGISAANRDAVAMVFVQFADGRVFTGTGFAVHSDANGGEII"
     gene            complement(981..2036)
                     /locus_tag="VLD58_05955"
     CDS             complement(981..2036)
                     /locus_tag="VLD58_05955"
                     /inference="COORDINATES: protein motif:HMM:NF033484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Stp1/IreP family PP2C-type Ser/Thr phosphatase"
                     /protein_id="HSB53878.1"
                     /translation="MTQGPVQISVFGKTDVGRTRDHNEDTFLVADLTRRVASLHPEVR
                     EHEVGPRGSLFMVADGMGGAAAGEVASRMAADLVFGHMTTVWPEDPEISANRFAYRMK
                     EAVELANNRIHAHAKEHPEVRGMGTTATVAGVFGTGLYLAQVGDSRAYLVRHGVATQI
                     TKDQSLMQRLVEAGELTEEEAEQSERRNIILQALGPDPRVKVDLTYQELRQGDVLVLC
                     SDGLSGQVRKDEIASVISGTPDLVEACAKLIETANERGGPDNITAVAARFHGGLPEAD
                     SAAGVGHQVYPLTETESTTEPVPIYTGSPAPVPIGGPAEAPTQEETQGQGGRKVVLGV
                     LMLLLLAATLLLLFTER"
     gene            complement(2045..>2808)
                     /locus_tag="VLD58_05960"
     CDS             complement(2045..>2808)
                     /locus_tag="VLD58_05960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53879.1"
                     /translation="TQQLQMRPRGDAPSATGGAVPATRIDPAIERQRAQEAAAKKAAA
                     PVAVAREVKKFPVVPVAIVLVALAIGGGGLAFKDKLLGKAKPDTTIADTSKPAAGGQQ
                     GTPDTPGAVVPQDTAGKGKPDTTLQQLSHQTANTATNSGGKPAGGGTKPPPRDSAHGP
                     IGTAEDRLLPTTDEAQNEDPKIRAAARQRAIRVYYRPNMSDSLRASAALVVMGSYTED
                     QNYRSALAWADSSYRLRPDPAVLTQINVLKQLLGN"
BASE COUNT          380 a          972 c          960 g          496 t
ORIGIN      
        1 tgatgatctc gccgccgttg gcatcggagt gcaccgcgaa gccggtgccc gtgaacaccc
       61 gcccgtcggc aaactgcaca aagaccatcg cgacggcatc gcggttggcg gcggaaatcc
      121 cggccgcgtt gagccgggcc gcaccggcga ggttccgctg ctgccgcatg gccgcgtcca
      181 gccggcgccg cagctccgcc atctggacct gatcggtggg cgaggcctcg gtgagctgct
      241 tccggagccg ggtggcttcg cccactgccg agtcgagcgc gctcctgagc ccttcgttgc
      301 cggcggagag ggccgccatc tgctgcatca ggctgtccac ccggcccacc agcatttccc
      361 gctgctcccg aagccgctgt cctgtggtac gcgcctccca gaggtacgcc cctgacatga
      421 ccaccaggag cccgaagagg atgagcgtcg tgcggcgcag ccccttggtc tccttcttta
      481 ccgcgatctg gacccgggtg gtggtgccgg gaccgggtgt cggtcgcggg ttctggaaac
      541 gttccggcct gggcttcggc ttgggcggcg gttccggttc cggctgttcc tgcatcccga
      601 agaccacggt cccgccctgc tgggcgctgg cgaccggcgg cacgaccggg cgggtgtcgc
      661 cgatggcggc gaactccacc tcgggaccgg cctggccgaa ccggacaaca tccttgctgg
      721 ccagcacatg gtcagtgctg agccgccggc cgttcacgaa ggtgccgttg gtgctgccga
      781 gatcgcgcag aacgtacagc atgccttcga gggaaaccgc ggcatgccgg ctggagacgt
      841 cgagatcctt gtcgggatcg aactgcagct cacactgcgg gtggcgtccg atgcagatgt
      901 agttctggct gaagacgctg gtctgccccg cgcgggcgcc ggaaatgacg gtgaacttgg
      961 ctttcatgcc ggggcggcgg tcaccgctcg gtgaacagca ggagcagcgt cgcggcgagg
     1021 aggagcagca tcagcacgcc caggaccacc ttgcgcccgc cctgaccctg ggtctcctcc
     1081 tgggtcggag cctcggcggg gccgccgatg gggaccgggg cggggctgcc ggtatagatc
     1141 ggcaccggct cggtggtgct ctccgtctcg gtgagcggat agacctggtg gcccaccccg
     1201 gcggcgctat cggcctccgg cagcccgccg tgaaagcggg cggcgaccgc ggtgatgttg
     1261 tcggggccgc cgcgctcgtt agcggtctcg atgagcttgg cgcaggcctc gaccaggtcg
     1321 ggggtcccgc tgatgacact ggcgatctcg tctttcctga cctggcccga gaggccgtcg
     1381 gagcagagca ccagcacgtc gccctgccgc agctcctggt aggtgagatc gaccttgacc
     1441 cgcggatcgg ggccgagggc ctggaggatg atgttgcgcc gctcgctctg ctcggcctct
     1501 tcctcggtga gctcgcccgc ttcgaccagg cgctgcatca gggactggtc cttggtgatc
     1561 tgggtggcga cgccatggcg gaccaggtag gcccggctgt cgcccacctg agccaggtag
     1621 agcccggtgc cgaatacgcc tgctacggtc gcggtggtgc ccatgccacg gacttcgggg
     1681 tgctccttgg cgtgggcgtg gatccggttg ttggccagct cgaccgcctc tttcatccgg
     1741 taggcgaatc ggttggcgct gatctcggga tcttccggcc agacggtggt catgtgcccg
     1801 aagaccaggt cggcggccat ccggctggcg acctcgccgg ccgcggcgcc gcccatgccg
     1861 tcggccacca tgaagagcga gccgcgtggg ccgacctcgt gctcccgcac ctcggggtgg
     1921 agactcgcca cccgtcgcgt gaggtccgcc acgaggaacg tgtcctcgtt gtggtcgcgg
     1981 gtgcgaccga catcggtctt gccgaaaacg gagatctgca cggggccttg ggtcacgatt
     2041 ctcctcagtt cccgagcaac tgcttgagca cgttgatctg ggtcaggacc gctggatccg
     2101 gacgcagccg atacgaactg tcagcccagg ccaatgctga ccgatagttc tggtcctcag
     2161 tgtaagagcc cattaccacg agcgcagccg aggcccgcaa ggagtccgac atgtttggcc
     2221 ggtagtagac cctgatagcc ctctgtcgtg ccgccgcgcg gatcttcggg tcctcgtttt
     2281 gtgcctcatc cgtagtaggc aagaggcgat cctctgccgt cccgatcggc ccatgcgccg
     2341 aatccctcgg cggcggcttg gtcccaccac ctgccggctt ccctccggaa ttcgtcgccg
     2401 tgttcgccgt ctggtgactg agctgctgta gagtagtgtc cggcttgccc ttacccgcgg
     2461 tgtcctgcgg caccacagcg cccggtgtat ccggcgtccc ctgctgcccg cccgccgcag
     2521 gtttggacgt gtcggcaatg gtcgtatccg gcttggcctt ccccagcaac ttgtccttga
     2581 acgcgagccc gccgcccccg atcgcgagcg ccaccagcac gatcgccacc ggaaccaccg
     2641 ggaacttctt cacttcgcgc gccacggcga cgggggccgc cgccttcttc gccgccgcct
     2701 cctgggcccg ctggcgctcg atcgccggat cgatccgggt cgccggcaca gcgccgcccg
     2761 tcgccgaggg cgcgtcaccc cgtggccgca tctgcagctg ctgggtgc
//
LOCUS       DATIFF010000396         2483 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1283323, whole genome shotgun sequence.
ACCESSION   DATIFF010000396 DATIFF010000000
VERSION     DATIFF010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2483
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1283323"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..190)
                     /locus_tag="VLD58_05965"
     CDS             complement(<1..190)
                     /locus_tag="VLD58_05965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53880.1"
                     /translation="MSGARWARALAGIGLMLFTGCTFGGQVARWRPASQAAGTEITLD
                     LENGKSVKGELLTLDSAGF"
     gene            complement(187..1725)
                     /locus_tag="VLD58_05970"
     CDS             complement(187..1725)
                     /locus_tag="VLD58_05970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53881.1"
                     /translation="MPHRSLLLILTLLAGCFVIRRVRVDEVRAPVRDSVQVSTPVKAH
                     LLDGSTVLYNNGVTVRQDRLVGPGQRYGLRLQLVEVVQSVAVDSVIGMETFRPNTDPI
                     ATIGLSFVATTVGAAAITATAAAIFGSCPTFYSDSAGTAVLEAEGFSYSIAPLFEARD
                     VDRLRATAGADGTLRLEVRNEALETHEINQLQLLETVRRLDEQVAPDGYGRPLALSAL
                     VAPTAARDRAGRDLIARLREADGTVFASDTARLGQATEQDLGDYIDLTFPPVAAGDSL
                     ALVFRLRNSLLNTVLLYDVMLGSRAARALDWQSRDLSRIGPALELGNWYSARMGLRVL
                     APREGGYREVGRLRDTGPIAWKDVAIVVPRPGSDSVRIRLSFPVDNWRIDRVALAASV
                     RRPLIRTLTLARVDGAGARSDTSALGAMREADGRYLETRPGQHFTAVWEVGAAPAGSA
                     RTFLLASQGYYTEWIRGGWLATARDTSAFAATDASLLRAIEQWRRSRDSLEHRFYASR
                     IPVR"
     gene            1846..>2483
                     /locus_tag="VLD58_05975"
     CDS             1846..>2483
                     /locus_tag="VLD58_05975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53882.1"
                     /translation="MLNYIWAGLIILSLGFALAADIGDLRRDTYRNGTPLPVSLTFTQ
                     SYSAGARRLPVTVRLDSAGLSSFYGQTVVPEASYSGELIQSRDGAELHFAKDVVLPEP
                     LATVRSMTSERDNDLRGRVALTVTDSGATGTLVFGPVRFVKLTAITKAAIDTAKTAVT
                     LALGLIGVIALWLGMLRIAEKSGLISIIVRVAEPVLRPLFPEIPKGHPAMGM"
BASE COUNT          392 a          875 c          858 g          358 t
ORIGIN      
        1 ggaatcccgc cgagtcgagg gtgagaagct cgccctttac cgactttccg ttctcgagat
       61 ccagcgtgat ctcggtgccg gccgcctgcg aggccggccg ccaccgtgcc acctgcccgc
      121 cgaaggtgca gccggtgaag agcatcaggc cgatgcccgc gagcgcccgg gcccatcgcg
      181 cgccgctcac cggaccggaa tcctgctggc gtagaagcga tgctccagcg aatcccggct
      241 ccgccgccac tgctcgatgg cgcgcagcag cgacgcatcg gtcgcggcaa aggccgaggt
      301 atcgcgcgcc gtggcgagcc acccgccgcg gatccactcg gtgtagtagc cctgcgacgc
      361 gaggaggaag gtgcgggcgc tcccggcggg ggcggctccc acctcccaga cggcggtgaa
      421 gtgctggccg gggcgagtct cgagatagcg gccgtcagcc tcgcgcatcg cccccagcgc
      481 gctggtgtcg gagcgggcac ccgcgccatc gacccgcgcg agggtaagtg tccggatgag
      541 cggcctccgg acggaggcgg ccagcgctac tcgatcgata cgccagttgt cgaccgggaa
      601 cgagagacga atccgcaccg agtcggagcc gggccggggc accacgatgg cgacgtcctt
      661 ccaggcgatg gggccggtgt cgcggagccg gccgacctcg cgatagccac cctcgcgcgg
      721 cgccagcacc cggagcccca ttctcgccga gtaccagttg ccgagctcga gcgccggacc
      781 gatccgggag aggtcccggc tctgccagtc gagcgcgcgc gccgcccgcg agccgagcat
      841 cacgtcgtag agcagcacgg tgttgaggag actgttccgg agccggaaga ccagggccag
      901 cgaatcgccc gcggcgacag gaggaaaggt caggtcgatg tagtcgccca gatcctgctc
      961 ggtggcctgg cccaggcgag cggtgtcgct cgcgaagaca gtcccgtcgg cctcgcggag
     1021 cctcgcgatg aggtcgcggc cggcacggtc gcgggccgct gtcggcgcga ccagggccga
     1081 gagcgcgagc gggcgtccat agccatcggg cgccacctgc tcgtccagcc ggcgcaccgt
     1141 ctccagcagc tgcagctgat tgatctcgtg ggtctcgagc gcctcgttcc tcacctcgag
     1201 ccggagcgtc ccgtcggcgc cggccgtggc gcggagccgg tccacatccc gcgcttcgaa
     1261 cagcggcgcg atgctgtagc tgaagccctc cgcctcgagc acggccgtcc cggcgctgtc
     1321 gctgtagaac gtcgggcagg atccgaagat cgccgcggcg gtggcggtga tggctgccgc
     1381 acccaccgtg gtcgccacga aggagagacc gatggttgcg atcgggtcgg tattggggcg
     1441 gaaggtctcc atcccgatca cgctgtccac cgccaccgac tgcaccacct ccaccagctg
     1501 gagccggaga ccgtaccgct gccccggccc gaccagccgg tcctgccgca ccgtaacccc
     1561 gttgttgtag agcaccgtgc tgccgtcgag caggtgcgcc ttgaccgggg tgctgacctg
     1621 gaccgagtct cgcaccggag ccctgacttc atccacccgg acccgccgga tgacgaagca
     1681 acccgcgagc agggtcagga taagcaggag tgatcggtga ggcatcaggg agtgcgggaa
     1741 gcggtgtggg cagcgggact ggatgccgaa aggtgcaggc gaaccgatcg gagcggaagg
     1801 tgagcggacg cgttatactc gtttcaccgc actcccggga ctcacatgct caactatatc
     1861 tgggccgggc tcatcatcct gagcctcggc ttcgcgctgg cggccgacat cggcgacctc
     1921 cggcgcgata cctaccggaa cggcacgccg cttcccgtca gcctcacctt cacccagagc
     1981 tactccgccg gcgcccgccg cctgccggtc acggtccggc tcgacagtgc gggactctcc
     2041 tcgttctacg gacaaactgt ggtgccggaa gcgtcgtatt ccggtgagct gatccagagc
     2101 cgggacggtg ccgagctcca cttcgccaag gacgtggtcc tgccggagcc gctggccacg
     2161 gtgcggagca tgacctcgga gcgcgacaac gacttgcgcg gccgtgtggc gctcaccgtc
     2221 accgactcgg gagcaaccgg caccctggtc ttcgggccgg tgcggttcgt caagcttacc
     2281 gccatcacca aggcagcgat cgacaccgcc aagaccgccg tcaccctggc gctcggtctg
     2341 atcggggtga tcgccctctg gctgggcatg ctccgcatcg ccgagaagtc ggggctcatc
     2401 tcgatcatcg tccgggtggc ggagccggtg ctccggcccc tcttccccga gatcccgaag
     2461 ggtcacccgg ccatggggat gat
//
LOCUS       DATIFF010000397         1251 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1590151, whole genome shotgun sequence.
ACCESSION   DATIFF010000397 DATIFF010000000
VERSION     DATIFF010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1590151"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..750)
                     /locus_tag="VLD58_05980"
     CDS             complement(<1..750)
                     /locus_tag="VLD58_05980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HSB53883.1"
                     /translation="MTPIRIEDLARHEGRSVTIRGWVTHSRSSGKIAFVVLRDGTGYL
                     QGVISRKEVSEAVWEAFPTLTQETSIALTGTVRAEPRAPGGFELHVSDLSVLGPSVDF
                     PIQPKEHGTQYLFEHRHLWLRSRRQVAIARVRHEVVQAIRDFFHARNFVLVDTPILTG
                     AIGEQAGELFSTEYFDLGRAYLAQTGQLYVEAAAAALGKVYCFGPTFRAEKSKTRRHL
                     TEFWMVEPEVAFNDSDANMRLQEAFVSYIVGR"
     gene            802..>1251
                     /locus_tag="VLD58_05985"
     CDS             802..>1251
                     /locus_tag="VLD58_05985"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSB53884.1"
                     /translation="MLWGMVNAACTGYRPVPEFDPGNVAEPSPVEGTPLTRLWRSRPV
                     RGPFAPLASDTTNAYLAGADRRVVAVGLTTGRTRWAVRLPGPPVGGVLLAGDAVFAAT
                     DQPGGKLYALKRESGAELWSRKTGYVQAPIALADGRIIALTRRGEILA"
BASE COUNT          195 a          413 c          457 g          186 t
ORIGIN      
        1 ccggcccacg atgtaggaca cgaacgcttc ctggagccgc atgttcgcgt cagaatcgtt
       61 gaacgccacc tcgggctcga ccatccagaa ctcggtcagg tgacgacggg tcttggactt
      121 ctcggcccgg aaggtgggac cgaagcagta gaccttgccg agcgcggccg cggcggcttc
      181 gacatagagc tgaccggtct gggccaggta ggcgcgaccc aggtcgaagt actcggtgct
      241 gaacagctcc cccgcctgct ccccgatggc gccggtgagg atgggcgtgt cgaccagcac
      301 gaaattgcgc gcgtggaaga aatccctgat ggcctgcacc acctcgtggc gtacccgggc
      361 gatcgcgacc tgccgccggc ttcggagcca gaggtgccgg tgctcgaaga ggtactgggt
      421 gccgtgctcc ttgggctgga tggggaaatc gacgctcgga cccagcacgg agagatcgct
      481 cacgtgaagc tcgaaaccgc cgggcgcccg cggttcggca cgcaccgtgc ccgtgagtgc
      541 gatggacgtc tcctgggtga gggtcgggaa cgcctcccac accgcctcgg agacctcttt
      601 ccggctgatc accccctgga ggtaaccggt gccgtcccga agcacgacga acgcgatctt
      661 gccgctcgag cgggagtggg tcacccaccc gcggatggtg acggagcggc cctcgtgacg
      721 ggccaggtct tcgatgcgta tgggcgtcat gatcgggtgc cgagtgggcg gcgccgccgc
      781 cggagggcgt ggagtctagc cgtgctctgg gggatggtca acgcggcatg cacgggctac
      841 cgcccggtac ccgagttcga tcccggcaac gtggccgagc cgagcccggt ggagggaacg
      901 ccgctcacgc gcctgtggcg gagccggccg gtccgggggc cgttcgcgcc gctggcaagc
      961 gataccacca acgcctatct ggccggcgcc gaccgccggg tggtggccgt cggcctcacc
     1021 accggccgga cccgctgggc ggttcgcctg ccgggaccgc cggtcggagg ggtgctcctc
     1081 gccggcgatg cggtgttcgc cgccacggat cagccgggcg ggaagctcta cgctctcaag
     1141 cgcgagagcg gggccgagct atggtcgaga aaaacgggct acgtgcaggc gccaattgcg
     1201 ctggccgacg ggaggatcat cgccctgacc cggcggggcg agatccttgc c
//
LOCUS       DATIFF010000398         7360 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1130151, whole genome shotgun sequence.
ACCESSION   DATIFF010000398 DATIFF010000000
VERSION     DATIFF010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7360
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1130151"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..748
                     /locus_tag="VLD58_05990"
     CDS             <1..748
                     /locus_tag="VLD58_05990"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HSB53885.1"
                     /translation="TPITPNQITLFAALVGVVAGVLLGMSVGRPDRLLVAGLLLFASV
                     VLDCCDGQLARRKKISSTYGAILDGIGDYAVGLSLGIGGTLYAVGYTGNALFWLLGLA
                     GIVSSAVQSALFDHSKTRYIAKVGRGYAEREENLDLVDGNRRQALAEGRYRDALLLWV
                     YLVYSRAQHAAMAISPADDPVAYRAAHAGRMRLWTFQGIGTHFAFAYLTTIAGYWWQP
                     GPIFYFAGTVTVFNLLLAYLMLREPRDARA"
     gene            745..1854
                     /locus_tag="VLD58_05995"
     CDS             745..1854
                     /locus_tag="VLD58_05995"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HSB53886.1"
                     /translation="MTLRATLTGPVVGDPEAHVAGLSVLLRQLLSFQDAGIDEVEVQG
                     IDPDRLPRDSRLTLSLLAVPAGAPRIDSVLTARIGLVWHRLLPRRLVAEGYRGDIEAA
                     PLGPGEFVVAPADVAERRRAEDLLLASLLKATDGIISRSINRRISLRVTRSLLETGLT
                     PNQMTLVAALFGVAAIAAVALGGTAWFIPGALLLQIQSILDGCDGEISRLKYIRSRLG
                     EWLDQVVDDGVNLGFFIATGWALYLAGWETARVLTIIGTVLHLIYQVALYTALIVSGG
                     GSGSVASIRWRGQKEHGDTPHDDGKPRSLVTQVKEALEMAGRRDFFTFLYLPAAVFGV
                     MEVALGWCTGIFVLSGLASGTHWLIFGPPEPARKG"
     gene            complement(1934..2701)
                     /locus_tag="VLD58_06000"
     CDS             complement(1934..2701)
                     /locus_tag="VLD58_06000"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HSB53887.1"
                     /translation="MDLRQHTRQTVILAAGNGSRLSAQRGELPKPLVRVAGRALIEHA
                     LDQAAAAGVEEAIIVTGKSADQMQAHLALVETPLKLTLVHNERYHDPNGVSLLCAEPY
                     VTGPFYLQMADHVFAHPVLRQLDRVEGPAGDHCRLLVDFHPVNLDEDDATKVRVNGHH
                     ITAIGKDVYPYDAVDTGCFRLDARVFEALGEVARREPPSVTLGMRHLLAQGLFSAVPL
                     TGVRWTDVDTPEDYAKAEMLLSAQLRRRSSVGVTAAA"
     gene            3010..3903
                     /locus_tag="VLD58_06005"
     CDS             3010..3903
                     /locus_tag="VLD58_06005"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSB53888.1"
                     /translation="MLACLLVTAILTAPLSPDSLSRRIAVAPAESLQVTSLGPTGGAS
                     VVIIPGLISPAYAFRKVMPPLAEAGVRSVVVEPLGVGRSGRPGDADYSHSAQARRVAA
                     IMDSLGIRHAVVMGHATGTAVALRLALLRPDLVKGLMLVEGGALESAAVPGVKKAIQF
                     SFLVRIFAGRGRIKKEVRKGLIASSGDTTWVTDSLVEHYTEGPAGDMGAVLRALKGMQ
                     RSIEPDSLRPRLHTIHVPVLLMLGGAAHEGGPSTGRVHTLVHELPQLRQRIVFGSGLH
                     IHEEQPDAMVAELLGLVRQGE"
     gene            3903..4391
                     /locus_tag="VLD58_06010"
     CDS             3903..4391
                     /locus_tag="VLD58_06010"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HSB53889.1"
                     /translation="MPAPTAVDLIRQTLEPPRGQAWHGGPTPVGALRGVDAGQARWSP
                     NGGRSSIWRLTLHIAYWKYTIRRHLEAGEIPRFPRTPANFPALPATPNEAAWRADRAL
                     LATEHSALVGALGRLDPRQLHRRPPTGKRWTWGEMAIGILAHDAYHTGQIQLLKRLYA
                     NR"
     gene            4421..4768
                     /locus_tag="VLD58_06015"
     CDS             4421..4768
                     /locus_tag="VLD58_06015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53890.1"
                     /translation="MADWSVNSRACTSVWVALRLLEQSKKVFKVSGIIPVKKFLFWNP
                     AASAEMRRLQATTLAKQMDNIFRLIDGATLEKDVTVADAVASMVGILVDGDQTMADLA
                     AACDACYRFWGEP"
     gene            4768..5940
                     /locus_tag="VLD58_06020"
     CDS             4768..5940
                     /locus_tag="VLD58_06020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53891.1"
                     /translation="MLTALRRTAAALALAAIVCLPGSLPAQEEARHGLVAELGNLGIS
                     PKALKDLLGDPETLNWALDRLLKGKAGRWQLLKDLNLRFATFQAEKSDARGLGLSYDY
                     SRSIKHEEIATKSANYTALGFDLSAAGNISFDRRINPRDFLQSDLALSVAVSRGGAYR
                     TTPAIRERLAQLRDSLALIESQEELDHSPLWAEYLGTVQPFLSTQLLLDLAATASFET
                     DQGFDDRQLVYAGRLGLDLKAWNNNSTLARWNVFDWPFATLRYLIGTDSAFAPRGATW
                     PTVQASLGLVDPVENDPRNAVASLGAFPRFKVEAAFRTPIASRGDNDVNFESDFRWYR
                     ELGAPAGVRTAGLDEFTYFAAAITTTLGPFVSFSAGRLPFDAESDRVYQLGFRTTF"
     gene            complement(5944..>7360)
                     /gene="glnA"
                     /locus_tag="VLD58_06025"
     CDS             complement(5944..>7360)
                     /gene="glnA"
                     /locus_tag="VLD58_06025"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HSB53892.1"
                     /translation="GRHPEPGTRYLEALMQPSRPSIPEFPRQLAGATKAEVAKLASEF
                     QVDFLRLQFTDILGINKNVEVPRSQFGKALDGEIMFDGSSIEGFVRIEESDMLLVPDL
                     TTFRILPMDDEGGRVARLLCDIYTPDHHPFAGCPRLTLKRQIARAKALGYSMMAGCEV
                     EFFLFEKDAQGNITTNTHDEASYFDLTPVDKGEELRRLIVHDLELMGFEVEAAHHEVA
                     PGQHEVDFRYADALTTADNIATFRFLVRDIANRHGFVASFMPKPIQGQAGSGMHTHQS
                     LFKGKDNAFYDPKTENQLSATAMSYVEGLLQHARGFCAITNPLINSYKRLVPGYEAPI
                     NVAWSMRNRSPLVRIPERREDGTRCELRMPDPSANPYLSLTVQLAAGLDGVEHKFECR
                     EPVNRNIFRMSYRDRRKYQIDDLPRDLHEALDRFEKDDVIKAALGEHLTERFLEAKRE
                     EVAQFNREVTEWEVRSYLGRY"
BASE COUNT         1130 a         2551 c         2438 g         1241 t
ORIGIN      
        1 cacccccatc actcccaacc agatcaccct cttcgcggcc ctcgtcgggg tggtggccgg
       61 cgttctgctc ggcatgagtg tcgggcggcc ggaccggctg ctggtcgccg gcctgctcct
      121 ctttgcctcg gtggtgctcg actgctgcga tggccagctc gcccggcgca agaagatctc
      181 gtcgacctac ggcgcgatcc tcgacggcat cggtgattac gcggtggggc tctccctggg
      241 catcggtggg acgctctacg cggtgggcta caccggcaac gccctcttct ggctgctggg
      301 gctcgccgga atcgtgagct ccgcggtcca gtcggcgctg ttcgatcatt ccaagacccg
      361 ctacatcgcc aaggtgggcc ggggctatgc cgagcgggag gagaacctcg atctggtcga
      421 cggcaatcgc cggcaggcgc tggccgaagg ccggtatcgc gacgccctgc tcctctgggt
      481 ctatctggtc tactcgcggg cccagcacgc ggccatggcc atcagcccgg ccgacgaccc
      541 ggtggcctat cgcgccgcgc atgccggccg catgcgcctc tggacctttc agggcatcgg
      601 cacccacttc gcgttcgcgt atctcaccac gatcgccggt tactggtggc aaccggggcc
      661 gatcttctac ttcgccggca ccgtgaccgt cttcaacctc ctgctcgcct acctcatgct
      721 ccgcgaaccg cgggacgccc gggcgtgacc ctccgcgcca cgctcaccgg tcccgtcgtg
      781 ggagatcccg aggcccatgt ggccgggctc tccgttctcc tccgccagct gctctcgttc
      841 caggacgcgg gcatcgacga ggtcgaggtg cagggcatcg atcccgaccg cctgccccgc
      901 gactctcgcc tcacgctgtc cctcctcgcg gtgccagccg gggcgccccg tatcgacagc
      961 gtgctcaccg cgcggatcgg gctggtctgg caccggctgc tgcccaggcg gctggttgcc
     1021 gagggctatc ggggcgacat cgaagccgcg ccactcggcc cgggcgagtt cgtggtggcg
     1081 ccggcggatg tcgccgagcg gcgccgggcg gaggacctgc tcctggcctc gctgctcaag
     1141 gcgaccgacg gaatcatctc ccgctcgatc aaccggcgga tctccctcag ggtcacccga
     1201 tcgctgctgg agacgggtct cacccccaac cagatgacgc tcgttgcggc cctgttcggg
     1261 gtggcggcca tagccgcggt ggctctgggc gggacggcct ggttcatccc cggagcgctg
     1321 ctcctccaga tccagtcgat cctcgacggc tgcgacggcg agatctcccg cctcaagtac
     1381 atccggtccc ggctgggaga gtggctcgat caggtggtgg acgacggggt gaatctcggg
     1441 ttcttcatcg ccacgggatg ggcgctgtat ctggcgggat gggagacggc gcgggtgctc
     1501 acgattatcg gcaccgtgct tcacctcatc taccaggtgg ccctctacac ggcgctgatc
     1561 gtcagcggcg gcggcagtgg cagcgtcgcg agcatccgct ggcggggcca gaaggaacac
     1621 ggcgacaccc cgcacgatga tggaaagccg cggtccctgg tcactcaggt gaaggaggcc
     1681 ctcgagatgg cgggccggcg ggacttcttc accttcctct atcttccggc cgcggtcttc
     1741 ggcgtcatgg aggtcgcgct cggatggtgt accgggatct tcgtgctctc cgggctcgcg
     1801 agcggcactc actggctcat cttcggcccg ccggagccgg cacggaaggg gtagagccgc
     1861 ggatccatcg aagggtacca acgcagaacg ggcgacccac agggtcgccc gtttgagttt
     1921 tccgccggcc ggactacgct gccgcggtaa cgcccaccga ggaccggcgc cggagctgcg
     1981 cgctcaggag catctcggcc ttggcatagt cttccggggt gtccacgtcg gtccagcgca
     2041 cgccggtgag cggcaccgcc gagaagagcc cctgcgccag caggtggcgc atgccgaggg
     2101 tcaccgaagg cggctcccgg cgggccactt cgccgagcgc ctcgaacacc cgggcatcga
     2161 ggcggaagca gccggtgtcc accgcgtcat acgggtagac atccttgccg atcgcggtga
     2221 tgtggtgccc gttcacccgg accttggtcg cgtcgtcctc gtccaggttc accggatgga
     2281 agtccaccag cagacggcaa tggtcgcccg ccgggccctc gacccggtcc agttgacgca
     2341 gcaccgggtg ggcgaagaca tgatcggcca tctggagata gaacgggccg gtcacatagg
     2401 gctcggcgca gagcagcgac acgccgttgg gatcgtggta gcgctcgttg tgcaccaggg
     2461 tcagcttgag cggagtctcg accagcgcga gatgggcctg catctgatcg gcggacttgc
     2521 cggtcacgat gatcgcttcc tccaccccgg cggccgcggc ctgatccagc gcatgctcga
     2581 tcagcgcacg accggcgacg cgcaccagcg gcttgggcaa ctccccgcgc tgggcggaga
     2641 gccgcgagcc gttgccggcg gcgaggatga cggtctgcct ggtgtgctgc ctgagatcca
     2701 tggtcgtgtc accggggcga agtgaaagcc cagaaacgag ttcgcgtctc ttggggcaac
     2761 aagcgggccg agaaacaggc ctcggaacgc ccgactagcc ttttggcaac acgccttggc
     2821 catttaccgt aaactatttc atcacaatca cttacagagt atggccgaag tggggtaacc
     2881 ggacagtgcc accctgtggc ccggccagtc ccatcccgaa ggtcccagcc gtgtcattcc
     2941 acaacgtgtc acttcgcgtg cgagaccggt gcgattgctc taaccagagg gctccctcac
     3001 attccgccca tgcttgcatg cctgctggtc accgcaatcc tcaccgcgcc tctctcgccc
     3061 gactcgctct cgcgccgcat cgcagtcgct cccgctgaga gcctccaggt cacctccctc
     3121 ggtccgaccg gcggagcatc cgtggtgatc atccccgggc tgatctcgcc ggcgtacgcc
     3181 tttcgcaagg tcatgccgcc gctggcggag gccggtgtgc gctcggtcgt ggtcgagccg
     3241 ctcggcgtgg gccggtcggg acggccaggt gatgccgact actcccacag cgcccaggcc
     3301 cgccgagtcg cggccatcat ggattcgctc gggatccggc atgcggtggt gatgggccac
     3361 gcgaccggca ccgcggtggc gctccggctg gcgctgctca ggcccgacct ggtgaaaggg
     3421 ctgatgctgg tcgaaggggg cgcgctcgag agcgcggccg tgccgggcgt gaaaaaggcg
     3481 atccagttct ccttcctggt gcggatcttc gcgggccggg gacgcatcaa gaaggaggtg
     3541 cggaaggggc tgatcgcgag ctcgggcgat accacctggg tgaccgactc gctggtcgag
     3601 cactacaccg agggtccagc cggcgacatg ggcgcggtgc ttcgcgccct caaggggatg
     3661 cagcgctcga tcgagcccga ttcgctgcgc cccaggctcc acaccatcca cgtcccggtg
     3721 ctgctcatgc tgggtggcgc cgcacacgaa ggcggcccga gcaccgggcg ggtccacacc
     3781 ctggtgcacg agctgcccca gctcaggcag aggatcgtct tcggctccgg gctccacatt
     3841 cacgaagagc agcccgacgc gatggttgcc gagctgctcg ggctggtccg ccagggggaa
     3901 tgatgcccgc acccaccgca gtcgacctga tccgtcagac cctcgaacca ccccgtggac
     3961 aggcctggca tggcggcccg acgccggtcg gggcgctccg cggggtcgat gccggccagg
     4021 cccgctggtc acccaacggc ggccggtcga gcatctggcg gctgaccctc cacatcgcct
     4081 actggaagta caccatccgc cgccacctcg aggcgggaga gattccccgc ttcccccgca
     4141 cgcccgccaa tttcccggcg ctccccgcca ctccgaacga agcggcgtgg cgggccgacc
     4201 gggctcttct cgcaactgag cacagcgccc tggtcggcgc cctgggccgt ctcgatccgc
     4261 ggcagctcca tcgccgcccc ccgacgggca agcgctggac ctggggtgaa atggccatcg
     4321 gcattctggc gcacgacgcc tatcatacag gacagatcca gctgctcaaa cggctctacg
     4381 ccaatcgtta ggcacccggg agtcacgaga ggagaccaac atggctgact ggtcggtcaa
     4441 cagccgcgcc tgcacctcgg tgtgggtggc gctccgcctg ctcgagcaga gcaagaaggt
     4501 gttcaaggtc tccggcatca tccccgtgaa gaagttcctg ttctggaatc cggccgccag
     4561 cgcggagatg cgccggctcc aggccaccac gctggccaag cagatggaca acatcttccg
     4621 gctgatcgac ggggcgaccc tcgagaagga cgtcacggtg gcggatgccg tggcatcgat
     4681 ggtcggcatc ctggtcgacg gcgaccagac catggccgac ctcgccgccg cctgcgatgc
     4741 gtgctaccgg ttctggggag agccctgatg ctcaccgccc tccgccggac cgccgccgcc
     4801 ctcgcgctgg cggccatcgt gtgccttccc ggctcgctcc ccgcgcagga agaggcccgt
     4861 cacggcctgg tcgccgagct gggcaacctc ggcatttctc ccaaggcact caaggacctg
     4921 ctcggcgatc ccgaaaccct caactgggcg ctcgaccggc tcctcaaggg caaggccggg
     4981 cggtggcagc tcctcaagga cctcaatctc cgtttcgcca ccttccaggc cgagaagagt
     5041 gacgccaggg gcctcgggct gagctacgac tactcccgtt ccatcaagca cgaagagatc
     5101 gccaccaaga gcgcgaacta caccgccctg ggcttcgatc tcagcgctgc cggcaacatc
     5161 tccttcgacc gccggatcaa cccgcgcgac ttcctccagt ccgacctggc gctctcggtg
     5221 gccgtctccc ggggcggcgc ctatcgcacc acgcccgcga tccgcgaacg gctggcgcag
     5281 ctccgcgaca gcctggccct gatcgagagc caggaggagc tggaccacag tccgctctgg
     5341 gccgagtacc tcggcaccgt ccagccgttc ctttccaccc agctgctgct cgacctggcc
     5401 gccaccgcgt ccttcgagac cgaccagggt ttcgacgacc ggcagctggt gtacgccggc
     5461 agactgggac tcgacctcaa ggcgtggaac aacaactcga ccctggcccg ctggaatgtc
     5521 ttcgactggc ccttcgcgac cctccgctac ctgatcggca ccgactccgc cttcgcgccg
     5581 agaggagcca cctggccgac ggtgcaggcg tcgctgggat tggtggaccc ggtggagaac
     5641 gatccccgga acgcggtggc gagcctgggg gcgttcccca ggttcaaggt cgaggccgcc
     5701 ttccgtactc cgattgcgag ccggggcgac aacgatgtca acttcgagtc ggatttccgc
     5761 tggtatcggg aactgggggc gccggcaggg gtgcgtacgg cggggctcga cgagttcacc
     5821 tacttcgcgg cggcgatcac caccaccctg gggccgttcg tcagcttttc ggcgggacgc
     5881 ctgcccttcg atgccgaatc ggaccgggtg tatcagctgg ggttcaggac caccttctga
     5941 gcctcagtac cgcccgagat agctccgcac ttcccactcg gtcacttccc ggttgaactg
     6001 ggctacttcc tcccgcttgg cctcgaggaa ccgctcggtg aggtgctcgc ccagcgccgc
     6061 cttgatcaca tcgtccttct cgaaccggtc gagcgcctcg tgcaggtcgc ggggcaggtc
     6121 gtcgatctgg tacttccgac ggtcgcggta gctcatccgg aagatgttcc ggttcaccgg
     6181 ctcgcggcac tcgaacttgt gctccacccc gtcgagcccc gccgccagct gcaccgtgag
     6241 cgagaggtac gggttggccg agggatcggg catccggagc tcgcagcggg tcccgtcctc
     6301 acgccgctcg ggaatgcgga ccagcggtga gcggttccgc atgctccagg cgacgttgat
     6361 cggcgcctcg taccccggca ccagccgctt gtagctgttg atcagcgggt tggtaatggc
     6421 gcagaagccg cgggcgtgct gcagcagccc ttccacgtag gacatcgccg tggccgaaag
     6481 ctggttctcg gtcttcgggt cgtagaaggc gttgtctttt cccttgaaca gactctggtg
     6541 ggtgtgcatg ccgctgccgg cctggccctg gatcggcttg ggcatgaacg acgccacgaa
     6601 gccgtgccgg ttggcgatgt cgcgcaccag gaagcggaag gtggcgatgt tgtcggcggt
     6661 ggtaagcgcg tcggcgtagc ggaaatccac ctcgtgctgg cccggcgcca cctcgtgatg
     6721 ggccgcctcc acctcgaacc ccatgagctc gaggtcgtgc acgatcaggc ggcggagctc
     6781 ctcgcccttg tccaccgggg tcaggtcgaa gtagctggcc tcgtcgtggg tgttggtggt
     6841 gatgttcccc tgggcatcct tctcgaagag gaagaactcc acctcgcacc cggccatcat
     6901 ggagtagccc aatgccttgg cccgggcgat ctggcgcttg agggtcaggc gggggcagcc
     6961 ggcgaagggg tgatggtcgg gggtgtagat gtcgcacaga agccgtgcca cccggccccc
     7021 ctcgtcatcc atcggcagga tccggaaggt cgtcaggtcc ggcaccagca gcatgtcgct
     7081 ctcctcgatc cggacaaaac cctcgatcga ggagccgtcg aacatgatct cgccatccag
     7141 ggccttcccg aactggctcc ggggcacctc gacattcttg ttgatcccga ggatgtcggt
     7201 gaactggagc cgcaggaagt cgacctggaa ctcggacgcc agcttggcga cctcggcctt
     7261 ggtggcaccg gcgagctgac gggggaattc gggaatggag ggacgggagg gctgcatgag
     7321 cgcttccagg taccgagtgc cgggttcagg gtgacggcct
//
LOCUS       DATIFF010000399         6774 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_976355, whole genome shotgun sequence.
ACCESSION   DATIFF010000399 DATIFF010000000
VERSION     DATIFF010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6774
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_976355"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1232)
                     /locus_tag="VLD58_06030"
     CDS             complement(<1..1232)
                     /locus_tag="VLD58_06030"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB53893.1"
                     /translation="MLRERLNEELAGAIGIERFVREIQLTARLTNPNIVPVLDSGILA
                     GGSIALPWYAMAYIEGESLRSRLSRDKVLPVEEAVRLAADAGAALAVAHRAGIVHRDI
                     KPENLLLADGHLRVVDFGIAKALTDTGGERLTSTGFAVGTPAYMSPEQSGAEPVDART
                     DQYSLACVLYEMLVGEPPFTGPSTQAVVARRMTEPARGIRAIRSTVPAAVESAVLRAL
                     ERVPADRYPDMASFIRGLGQSEPRRGRLRMPRGLGLATAIVAIAGIGLALAAVAHRPA
                     APGLDPTTAALYRQGLRAYEQRTTEGAAEAIATFQEALAHDSGAAPVWVALAKTYVRA
                     YERPFTIPSIAHDSLLRLAVHAVDRARTINPASSEAWVATALVSRSVDPTDLSPPMNA
                     VRRALALDSSNAEAWHYLA"
     gene            complement(1249..1602)
                     /locus_tag="VLD58_06035"
     CDS             complement(1249..1602)
                     /locus_tag="VLD58_06035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53894.1"
                     /translation="MAFSRTVLGWVVVTLLFVLWREVERRVKGTPGGVLPSLKANLPA
                     LAIEALLLTLFAGLWFGSLGSGGAWLLFLVVGSLMEIPSRLRGHPLGSLPWREIIPGI
                     GRIMIAGVLLGFLLA"
     gene            complement(1606..2964)
                     /locus_tag="VLD58_06040"
     CDS             complement(1606..2964)
                     /locus_tag="VLD58_06040"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSB53895.1"
                     /translation="MTIRRRASLLLGLSALALACTPKHKDRIALVGGNIISGAGDAVL
                     RDAVIVVYQGRIEAVAPREGFTIPKTAVEVDVTGRWIIPGLIDGHAHTERWALGRYVA
                     AGITSLRDVHGQNDSILALKEEVSLGGEVAPRIYTAGAMIDGNPPTYSDATGIRDGDQ
                     ARRAVDARAVAGVDYIKTYTRMTPELFKPLLDEAGTFNLKVTSHLGLTDALTAMRLGV
                     NSIEHMSGVPEAASGNAEKFYAEHRKSFFAGWNYFERSWASLDSASLTRVATALAEGH
                     VTLIPTLVLHETYSRLDDPAVLGSDDVKSVPDSVVTRWNLPDLKSRAGWDDAQFAAFR
                     ASRPNQDLFLRAFRSAGGRIVAGTDAANQMLVPGWSLHTELELLVNAGLTPEDALETA
                     THNTAQLLGADSLGLVAVGKLADLVVLKANPLTDIRNTRQVERVMVRGQLYLADSLRA
                     TF"
     gene            3285..4730
                     /locus_tag="VLD58_06045"
     CDS             3285..4730
                     /locus_tag="VLD58_06045"
                     /EC_number="2.4.1.15"
                     /inference="COORDINATES: protein motif:HMM:NF013173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003825 - alpha,alpha-trehalose-phosphate
                     synthase (UDP-forming) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-6-phosphate synthase"
                     /protein_id="HSB53896.1"
                     /translation="MKRGPRIPLILVSNREPFVHRRAGDGTLRVEAPAGGLTSALQPV
                     MVASGGTWVAWGSGPADFEVTDPGDTVMVPPEKPAYRLRRLRLTAEEIQGYYVESANR
                     ALWPLCHSQLTRFVYDAADWLCYKNVNERFAASVIAEAAGEPAICWVQDYHLGLLPAM
                     LRKVRTLFVHQFWHIPWPSPDILRVLPPARSLVQGLLGNHLLGFQTTNDVRNFLSSVR
                     RCLKDAVVEPARGLVRYKGRRTVVRAFPISIDVPSFEATARRPDTMAVARRVRREALP
                     ADGHLLLGVDRVDYTKGIPRRFMAMDRLLTDNPDLIGRVTLIQVAVPSRSGVPEYLAY
                     EEEVVNLAADLNTRYGRSDWMPIRLVRESLDQSHLAAYYRAADICIVSPLQDGMNLVA
                     KEFVACQDGRFGVLLLSRFAGAAREMREALLVNPYDVGATAEAILRAIRMPVTERGRR
                     LNALRRRLRRNTIQDWMEDIFAEVSSVRRNA"
     gene            4727..5497
                     /gene="otsB"
                     /locus_tag="VLD58_06050"
     CDS             4727..5497
                     /gene="otsB"
                     /locus_tag="VLD58_06050"
                     /EC_number="3.1.3.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004805 - trehalose-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
                     /protein_id="HSB53897.1"
                     /translation="MSIPLARGNVGRVVLDTLAAARRPLLFLDLDGTLAPLVDRPRRA
                     RVPAATARAIQRLRRSGVRVVLVSGRSVASALGVAHTPVDAILGDHGARLYEHGRLTT
                     WLPASRAQFTHAADRLERLLEGTRGVRFVRKERSLAIHLRLPKNEHGRTARRIARMLR
                     KEGLRVLFGHRILDAQLPGVDKGRAVMKWLRRHPRPDAVLYAGDDTTDEDAILALAGQ
                     AFTVAVGPRPRVATYRTSSTRTFAAWLSRLADARARRR"
     gene            5501..5938
                     /locus_tag="VLD58_06055"
     CDS             5501..5938
                     /locus_tag="VLD58_06055"
                     /inference="COORDINATES: protein motif:HMM:NF039283.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalase-like domain-containing protein"
                     /protein_id="HSB53898.1"
                     /translation="MQQQPPIADYGLIGDMRTAALVSRYGRIDWCCLPRFDSGSLFAA
                     ILDPERGGNWSIQPVDDGFTARQQYREGTNILETVFRTEGAFSICTFWLAEALLRCGD
                     RQANGSSAACSTGPTTSGSTPRRSTRLLASSWAISPRALPTSP"
     gene            complement(6028..6372)
                     /locus_tag="VLD58_06060"
     CDS             complement(6028..6372)
                     /locus_tag="VLD58_06060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53899.1"
                     /translation="MAELHDMEMSWTDSGWMDPAPTPFEPPAAAPAPMAETPAMAPAA
                     APKPAARPKKKAAPKKKKAAPKKAAKKPAKKAAKKAAKKPARKAAKKAAKKVKKAAKK
                     ATKKAAKKKKKK"
BASE COUNT         1021 a         2387 c         2268 g         1098 t
ORIGIN      
        1 gccaggtagt gccaggcctc ggcgttggag gaatcgagcg ccagtgcccg gcgtaccgca
       61 ttcatcgggg gcgagagatc ggtcgggtcg acactgcgac tcaccagtgc cgtggcaacc
      121 caggcctcgg aactggcggg attgatggtg cgggcccgat ccaccgcgtg cacggcgagg
      181 cgaaggaggc tgtcgtgggc gatcgaaggt atggtgaagg gccgttcgta ggcccggacg
      241 taggtcttgg ccagcgccac ccagaccgga gccgcgccgg aatcatgtgc cagcgcctcc
      301 tggaaggtgg cgatcgcctc ggccgcacct tcggttgtgc gctgctcgta ggcccgtagt
      361 ccctgccgat agagggcggc ggtggtcgga tcgagccccg gggccgcggg gcgatgggca
      421 acggcggcca gggccagtcc gattccggct atcgcaacga tcgctgtggc gaggccgaga
      481 cctcgtggca tgcggagccg accccgcctt ggttcggact ggccaagtcc gcggatgaac
      541 gacgccatgt cgggatagcg gtccgccggc acccgttcca gggcgcgaag gaccgccgac
      601 tcgacggcag cgggcacggt gctgcggatc gcccggatcc cgcgggccgg ctccgtcatc
      661 ctccgggcga cgaccgcctg ggtggacggc ccggtgaacg gcggctcgcc caccagcatt
      721 tcgtagagca cacacgcgag gctgtattga tcggtccggg catccaccgg ttcggcgccg
      781 gactgctccg ggctcatgta cgccggggta ccgacggcga acccggtgct ggtgaggcgc
      841 tcgccgccgg tgtcggtcag ggccttggcg atcccgaagt cgaccacgcg caggtgacca
      901 tcggccagca ggagattctc cggcttgatg tcccggtgca caatgcccgc ccggtgcgcc
      961 accgccaacg ccgctcccgc gtcggcggcc aggcgtaccg cctcctcgac cggcagcacc
     1021 ttgtcccgcg agagccggga ccggagcgac tcgccctcga tgtacgccat ggcgtaccag
     1081 ggaagcgcga tcgatccgcc ggcgaggatg ccggagtcga gcacggggac gatgttggga
     1141 ttggtaagcc gcgcggtgag ctgaatttcg cgaacgaagc gttcgatgcc gatggcgccg
     1201 gccagctcct cgttcaggcg ctcacgcaac atccggcggc ctcccggctc aagccagcag
     1261 gaagcccagc agcactcccg cgatcatgat gcggccgatg ccagggatga tctcccgcca
     1321 gggcaagctg ccgagcggat gaccccgcag ccgcgacggg atctccatca acgatcccac
     1381 caccagaaac agcagccatg ccccgccact tcccaggctc ccgaaccaga gccccgcgaa
     1441 caacgtcaac agcagcgctt cgatcgccag ggccgggagg ttggccttga gcgacggcag
     1501 gacccctccc ggtgtgccct tcacccggcg ttccacctcg cgccacagga caaagagcag
     1561 cgtgaccacc acccacccga ggaccgtgcg ggagaacgcc atcagctaga aggtggcgcg
     1621 cagcgaatcg gcgagataga gctggccccg gaccatcacc cgctccacct ggcgggtgtt
     1681 ccggatgtcg gtgagcgggt tggccttgag caccaccagg tccgccagtt tgcccaccgc
     1741 caccagcccg agcgagtcgg cacccagcag ctgcgccgtg ttgtgggtcg ccgtctcgag
     1801 cgcatcctcc ggggtgagcc cggcattcac cagcagctcg agctcggtgt ggaggctcca
     1861 gcccggcacc agcatctggt tggccgcatc ggtgcccgcg acgatccggc cccccgccga
     1921 gcggaaggcg cgcaggaaga gatcctggtt gggccgtgag gcgcggaagg cggcgaactg
     1981 ggcgtcgtcc catcccgccc gcgacttgag atcgggcagg ttccaccggg tcaccaccga
     2041 gtcgggcacc gacttcacat cgtcgctccc cagcaccgcc ggatcgtcca ggcggctgta
     2101 ggtctcgtgc agcaccagcg tgggaatgag cgtgacatgc ccctcggcca atgcggtggc
     2161 gacccgcgtg aggctggcgg agtcgagcga agcccagctc cgctcgaaat agttccaccc
     2221 cgcgaagaag ctcttccggt gctcggcgta gaacttctcg gcgttgccgc tcgccgcctc
     2281 cggcactccg ctcatgtgct cgatcgagtt gacgcccagc cgcatggccg tgagcgcatc
     2341 ggtgaggccg agatgggagg tcaccttgag attgaaggtg ccggcctcgt cgagcagcgg
     2401 tttgaacagc tccggggtca tccgggtata ggtcttgatg tagtcgaccc cggccaccgc
     2461 ccgcgcgtcg accgcgcgcc gggcctggtc gccgtcgcgg atcccggtgg catcgctgta
     2521 ggtgggggga ttgccatcga tcatcgcgcc ggcggtgtag atccgcgggg ccacctcgcc
     2581 acccaggctc acttcttcct tgagcgccag gatcgagtca ttctggccgt gcacgtcccg
     2641 caggctggtg atcccggccg ccacgtagcg gcccagcgcc cagcgctcgg tatgcgcgtg
     2701 cccgtcgatg agcccgggga tgatccagcg gccggtgacg tccacctcga ccgcggtctt
     2761 gggaatggtg aagccttcgc gcggggccac cgcctcgatc cgcccctggt acaccacgat
     2821 gacggcgtcg cggaggacag cgtccccggc gccgctgatg atgttgccgc ccaccagcgc
     2881 gatccggtcc ttgtgcttcg gcgtgcaggc cagggccagc gcgctcaggc ccaggagcag
     2941 gctagcccga cgacgtatag tcatgcagaa tcttccagcc atcgggtcgc cgctccatca
     3001 ccagggtgaa cggaccgctc gacgtcgtct ggccggcgcg atgtgccgcg cggtgaccag
     3061 cgccaccgtg ggagcgagcg gccgcacatc aaaatgcctc ggaccggaga ctgtcgcagg
     3121 aagcccccga cgcgaatgtt tcgacgggtc gcccgatggg ggcacgagtg tttgcccccc
     3181 aaagctgacc accgcccacg agcggcgcaa gatgacgcgc ctcaccccct tccatgcagc
     3241 cccgcgatgg gggtaccctt ggctctatgg caattctgga ctggttgaag cgcggtccca
     3301 gaatcccgct catcctggtg agcaatcgcg agccattcgt gcaccggcgg gcgggagacg
     3361 ggacactccg ggtagaagca ccggccggcg gactgacctc cgcgctccag ccggtgatgg
     3421 tggcctcggg cggcacctgg gtcgcgtggg gcagcggacc cgccgatttc gaggtgaccg
     3481 acccgggtga caccgtgatg gttccgcccg agaagcccgc ctaccggctc cgccgtctcc
     3541 ggctcaccgc ggaggaaatc cagggctatt acgtcgaatc ggccaaccgg gcactctggc
     3601 cgctctgcca ctcgcagctg acccgcttcg tctacgacgc cgcagactgg ctctgctaca
     3661 agaacgtgaa cgagcgcttc gccgcctcgg tcatcgccga agcggccggc gagcccgcca
     3721 tttgctgggt gcaggactat cacctcggcc tcttgccggc gatgctccgc aaggtgcgca
     3781 cgctcttcgt gcaccagttc tggcacattc cctggccgtc gcctgacatt ctccgcgttc
     3841 tcccgcccgc ccggagcctg gtgcagggcc tgctcggcaa tcacctgctc ggcttccaga
     3901 ccacgaacga cgtgcggaat ttcctcagct cggtgcgccg ctgtctcaag gatgcggtgg
     3961 tggaaccggc ccgcgggctg gtgcgataca aaggccggcg gacggtggtg cgcgccttcc
     4021 cgatctcgat cgacgtaccg agcttcgagg cgacggcccg ccggcccgac accatggcgg
     4081 tggcccgccg ggtccggcgg gaggcactcc ccgccgacgg ccacctgctg ctgggagtcg
     4141 accgggtcga ctacaccaag ggcattcccc gccggttcat ggcgatggac cggctgctca
     4201 ccgacaaccc tgacctgatc ggacgggtaa ccctgatcca ggtggcggtg cccagccgga
     4261 gcggagtgcc ggagtacctc gcctacgaag aagaagtcgt gaacctggcc gccgacctca
     4321 atacccggta tggccggtcg gactggatgc cgatccggct ggtgcgggag tcactcgacc
     4381 aatcccacct cgccgcctac tatcgggcgg ccgacatctg catcgtctcg ccgctccagg
     4441 acgggatgaa cctggtggcc aaggaattcg tcgcctgcca ggacgggcga ttcggggtgc
     4501 tgctgctgtc ccgcttcgcc ggcgcggccc gcgagatgcg cgaggcgctg ctggtgaatc
     4561 cctacgacgt cggcgccacc gccgaggcga ttcttcgcgc catccgcatg ccggtcacgg
     4621 agcggggacg gcggctcaac gcgctccggc gccggctgcg ccgcaacacg attcaggact
     4681 ggatggaaga catctttgcc gaggtctcca gcgtgcggcg caacgcgtga gcattcccct
     4741 tgcgcggggg aacgtcggga gagtggtgct ggacaccctg gccgcggccc ggcgtccgct
     4801 cctgtttctc gatctcgatg ggacgctggc gccgctcgtc gaccgtcccc gccgggcccg
     4861 ggtgccagcc gcgaccgctc gtgccattca gcggctccgc cgctccgggg tgcgcgtggt
     4921 cctggtctcg ggccgctcgg tggcaagcgc cctcggcgtg gcgcataccc ccgtcgatgc
     4981 gatcctgggt gaccacggcg cccggctcta cgaacatggg cgcctgacca cctggcttcc
     5041 ggccagccgg gcccagttca cccatgccgc ggaccggctg gagcggctgc tcgaggggac
     5101 ccgcggggtg cgattcgtcc ggaaggagcg ctcgctcgcg atccacctgc ggctcccgaa
     5161 gaacgagcat ggccgcaccg cccggcgcat tgcccggatg ctccggaagg aagggctccg
     5221 ggtgctcttc gggcaccgga ttctcgatgc ccagctgccc ggggtggaca agggccgcgc
     5281 ggtgatgaaa tggctccgcc ggcacccccg ccccgacgcg gtgctctacg ccggcgacga
     5341 taccaccgac gaagacgcaa tcctggctct ggccggccag gcctttaccg tggcggtggg
     5401 accccgcccc cgcgtcgcca cctaccgtac ctcgagcacc cgcaccttcg cggcctggct
     5461 cagccgtctc gccgacgcgc gcgcccgccg gagatagccg atgcagcagc aaccccccat
     5521 cgcggactac ggcctgatcg gcgacatgcg cactgccgcg ctggtaagcc gctatggccg
     5581 catcgactgg tgctgtctcc cccgcttcga cagcggcagc ctcttcgccg cgatcctcga
     5641 cccggaacgc ggcggcaact ggagcattca gccggtcgac gacggcttca ccgcccggca
     5701 gcagtaccgc gagggcacca acatcctcga gaccgtcttc cgcaccgaag gggcattctc
     5761 gatctgtaca ttctggctgg ccgaggcgct gctccgctgc ggcgaccggc aggcgaacgg
     5821 atcttccgcg gcatgctcga ccgggccaac cacctcgggc tctactccga ggagatcgac
     5881 ccggctactg gcgagttcct gggcaatttc ccccagggct ttacccacat cgccctgatc
     5941 aactgcgccg tggcgttcgc gcggaaggcc caaagcgaag cgccccgggc ctgagggacc
     6001 ggggcgcttc ctgccggcgg gcggcggcta cttcttcttt ttcttcttgg cggccttctt
     6061 ggtcgccttc ttcgccgcct tctttacctt cttggcggct ttctttgcgg ccttcctggc
     6121 cggtttcttg gccgccttct ttgcggcttt cttggccggc ttcttggcgg ccttcttggg
     6181 agccgccttc ttcttcttgg gggccgcttt cttcttcggc ctggctgccg gctttggagc
     6241 tgcggcagga gccattgcgg gggtctccgc catcggcgcg ggcgccgccg ctgggggttc
     6301 aaagggagtg ggcgcggggt ccatccaccc ggaatccgtc cagctcatct ccatatcgtg
     6361 cagctcggcc atgggcttcc tccagagact gccgcggcga gacacccgcc gccggtgcgc
     6421 gggcactgag gcccgtcacg taaaaatggg acgcagcaaa gatgcacttc ttctgctctt
     6481 gtgcaaggcg tggcaacaca cacataacta gcgcggtgct cgcgtgcagt gacgtccgtc
     6541 gtggctgtca ttcaggtggc gaaacggcgg catctttcct cgaaaggcgg ctggaaagtg
     6601 gcctcggcac agtcgtgtaa gtcattgtta tgtaaatgct tgcggctatc catctggctg
     6661 gctctcagcg gcggtttcgc gccgctggcg gcccagctcc ccgccgattc gctgctccgc
     6721 ccggttgcgg cggcgcgcac cggcatcgaa ttcaccggtc cggcgcgagc tgac
//
LOCUS       DATIFF010000400         8274 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1590955, whole genome shotgun sequence.
ACCESSION   DATIFF010000400 DATIFF010000000
VERSION     DATIFF010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8274
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1590955"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..195
                     /locus_tag="VLD58_06065"
     CDS             <1..195
                     /locus_tag="VLD58_06065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53900.1"
                     /translation="ETEQERIGIGLARQVLEGSPAGPARRTTGGRTSGLLSPTGSLRS
                     REKMVWDWPDIADRLIEDPR"
     gene            195..1814
                     /locus_tag="VLD58_06070"
     CDS             195..1814
                     /locus_tag="VLD58_06070"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4388 domain-containing protein"
                     /protein_id="HSB53901.1"
                     /translation="MAIKGSLKEASLPDVLQLLALGKKTGCLAIADRQNFGSIYFEEG
                     RICYAALVNRRDRIGDLLRKNQLVTNEQLDQAIRTQEAHRDRRLGDILIEMGAVAREK
                     LERLLFLQIEEAVYHLFTWTQGSFNFEAGVRPDNQVYTVSINPESLLLEGARRVDELS
                     QIEKKIPSYDLIFAIDPTHPPGNEVELSPEQQRILPLFDGSRDVRQVIDECSLIEFDA
                     IQALYGLITAGYVRRAGTSAKPVVPRANDTRVQEHRNLGIAFYKTGMLDEGQREFRRV
                     VDLSPDDAGAPFYLGLIALKQARWLEAVDTLQQAAERSGRRAAALHNLAFAFEQLGRL
                     AEAEAAYSEAAGKAREDPRIMLGWGVTALKRNDTEVAVSRLQRAGELLGDRQRPPTWY
                     WAMGLAVACQGDLNEAIDIATKGVEVHGNSAVLRNNLAVLQELGSDLGAAEMMLRNAL
                     SEDPTLPQVSKNLGDLLYRAGRYEDAFEAYERAAKLNPDLGDDLYFKMGNIAFKRRDR
                     ERARTCWRRVTELNPGHQLARANLDTLDASA"
     gene            1811..2635
                     /locus_tag="VLD58_06075"
     CDS             1811..2635
                     /locus_tag="VLD58_06075"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008983 - protein-glutamate
                     O-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HSB53902.1"
                     /translation="MTLHEDPGFDALALRIAGQAGLDVSAYKDRCLRRRLAVRMRACG
                     VHTYTDYLAVLDRSPEEFERLLDALTINVTKFFRNRETWDTLAAGPLPKLLKAREGRL
                     RVWSAGCSSGEEPYTITMLMVLVLEQMGRAGWLDRIRVDATDFDKASLDTARAARYPL
                     KAFSEAAEEIPRRFCRPVDADTVEVLPELRAMVHFLRSDLLREPPPSPPYDLIFCRNV
                     VIYFDRGTQEQLMLRFTEALAPGGILVLGKVETIFGPARERLELVDPRERIYRRAA"
     gene            2635..3120
                     /locus_tag="VLD58_06080"
     CDS             2635..3120
                     /locus_tag="VLD58_06080"
                     /inference="COORDINATES: protein motif:HMM:NF015908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheD"
                     /protein_id="HSB53903.1"
                     /translation="MAEELIVRVADLRVGRGDVVLLTLGLGSCIAIAVHDPAAAVGGL
                     AHILLPSRSLSRGAENPGRFPQTAIPRLLEEMVALGADPRRLVAKLVGGASMFANLVP
                     AGSMQMGDRNVISSREVLHQLAIPIVAEAVGGNEGRSVWFHVAQGKLQVRSVGHGVQL
                     L"
     gene            3104..4177
                     /gene="cheB"
                     /locus_tag="VLD58_06085"
     CDS             3104..4177
                     /gene="cheB"
                     /locus_tag="VLD58_06085"
                     /EC_number="3.1.1.61"
                     /inference="COORDINATES: protein motif:HMM:NF001965.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis-specific protein-glutamate
                     methyltransferase CheB"
                     /protein_id="HSB53904.1"
                     /translation="MSSSSELPGVLVVDDSPFFRRLVSELVTGSGEFRVVGNASNGQE
                     ALEQVHALQPDVVTMDIQMPELNGLDAIGYIMSESPRPIVVVSAHAGQGSAASIRALE
                     LGAVEVVPKDDGQGQVSALRIAPRLIEALRAALAADVRKVPVLARPRASGAFTRFARP
                     AGEARRCLAIAASTGGPRALAELVPALAVGLEAAVLIVQHMPPGFTRSLAERLDGLSA
                     HKVVEAAADMEVRSDTAYIAPGDYHMRVVPTPTGLRIALDQGPTVWGVRPAADPLFHS
                     VATIFSAAAIGVVLTGLGKDGAAGLRAIHDRGGVGIAQDKGTSTIYGMPGAALEAGGA
                     DLVLPLGAIAERAGALLREVPRR"
     gene            4174..4605
                     /locus_tag="VLD58_06090"
     CDS             4174..4605
                     /locus_tag="VLD58_06090"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HSB53905.1"
                     /translation="MSRGVLLVTSGGRRMGLPLQGILEVGDVPAVERVPGSAPAVRGV
                     MRARGRLVPLAHLGALVSGKACPAPTAERSAVLATVADRWLALEVEQVDAAPDEVVLP
                     PPEGSALAELTVGVVRRDQHWIPILNLEALAERLQGEGGGR"
     gene            4607..5080
                     /locus_tag="VLD58_06095"
     CDS             4607..5080
                     /locus_tag="VLD58_06095"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HSB53906.1"
                     /translation="MAATTTSGDELQFVVFRLGSQEFGLSIFQVERILRYEQPASLPN
                     APDFLEGVLPYGSGVVPLVDLRKRTGLAAEYKEETRVMVLSFEEHHVAVVVDQVVEVL
                     RVDARTITQPPPMVRGLAAEYISGIISRPSRTIVVLNAARLLSSTERLALTEAMP"
     gene            5077..5955
                     /locus_tag="VLD58_06100"
     CDS             5077..5955
                     /locus_tag="VLD58_06100"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSB53907.1"
                     /translation="MTDPTPPADPIVQAYRQQYQEIAARLEKASGGVERETVKREIIA
                     FFKRVDTALTDLGLVKEEIRLLVDRYKQMAAATETAQAPQFTGQRPVVQQDHLGASTY
                     IEKGWSLISLGDYGGAIQSLTKALALAPSEIQAQSLLGWAQMLHEDYDDALATFSKVL
                     MKEPANSLARINVGYICLKKRIFGEAIEHLSKAIRLDNDRKATLYAHYYLGLVYLERE
                     MFEDAVTFFNKTLTLGPNLIEAYYELGRANWFMGDQAAARQAWTDGFKANKFNPWGKR
                     CKEMLDTTAAGGEPPR"
     gene            6064..6990
                     /locus_tag="VLD58_06105"
     CDS             6064..6990
                     /locus_tag="VLD58_06105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53908.1"
                     /translation="MLLLLLQLLATDSTRVGSVTIIASAAQQQFATALAREAQKPVDW
                     PALGRRIPPPFTLVLAPDSASLARMTRGQAPGWGAGVTYPESRTIILRADLPDVPQTL
                     RHELAHLVLRERVQGRLPLWFEEGFAAWGSGEVSRSESIELNLAVAAGRVPPFSALDA
                     MLRSSPSSADIAYALAQSAVAEIGRHGPPGGLERLLGRLEAGVPFDSAMVVSTGLTVD
                     RFEETWQAALKRRYGLLTWLVAGGMWTVIAFGLGGLAWYRRERDRPRRAALDHGWIIA
                     DEGAAGGPSSPTPGVVEGHPEGGPVDPRDAPK"
     gene            7002..7193
                     /locus_tag="VLD58_06110"
     CDS             7002..7193
                     /locus_tag="VLD58_06110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53909.1"
                     /translation="MPSSDSAVSGRKLRFGRRNVILLGAAVVSLVAGYFWLNAGGTTG
                     AAALLVLGYCVLFPLGIAL"
     gene            7272..7346
                     /locus_tag="VLD58_06115"
     tRNA            7272..7346
                     /locus_tag="VLD58_06115"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7307..7309,aa:Val,seq:tac)
     gene            7411..>8274
                     /locus_tag="VLD58_06120"
     CDS             7411..>8274
                     /locus_tag="VLD58_06120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53910.1"
                     /translation="MRVVRLITLLALAAVPAVVQAQIPTRRQPTASSTSNSPRLLVGN
                     PHSFTAADSAPSVAAGEGLRTRIDKLAGGQFRVLTRQEMNEALKQFGYPADAILAPPT
                     QKVLAQSLNSRVVVISTLGKDASGKYVVTSRLSGVNDDAGNVVSGTQVAGQQMADLGG
                     KVADGFAPAIKSWNDAKGCVEQSKTAPAKAAEAAKKALAVMPNSGLANYCMGMLALGR
                     GNKADSAEAMRSFGEAVKGDPLSLAAWTQLAAGYEVAGDTAKTIDALQQMLRIAPTNA
                     PLRDLVFKKLLA"
BASE COUNT         1300 a         2796 c         2924 g         1254 t
ORIGIN      
        1 gagacggagc aggagcggat cggcattggg ctggcacggc aggtactcga ggggagccct
       61 gcgggtccgg cccggcgcac caccggcggc cgcaccagcg gtctcctctc gcccaccggc
      121 agcctccgca gccgcgagaa gatggtctgg gactggcctg acatcgccga ccgcctgatc
      181 gaggatcccc ggtaatggcg atcaagggca gtctcaagga agccagtctt ccggacgtgc
      241 tccagctgct ggcgctgggg aagaagaccg gctgcctggc gatcgccgac cgccagaatt
      301 tcggctcgat ctacttcgag gaagggcgga tctgctatgc cgccctggtc aaccggcggg
      361 accggatcgg cgacctgctg cgcaagaacc agctggtcac caacgagcag ctggaccagg
      421 cgatccggac ccaggaggcc catcgcgacc ggcggctggg cgacatcctg atcgagatgg
      481 gcgcggtggc gcgggagaag ctcgagcggc tcctcttcct ccagatcgaa gaggcggtct
      541 accacctgtt cacctggacc caggggtcgt tcaacttcga ggccggggtc cggcccgaca
      601 accaggtcta caccgtctcg atcaaccccg agtcgctgct cctcgaaggg gcgcgccggg
      661 tcgacgagct gagccagatc gagaagaaga tcccgagcta cgatctcatc ttcgcgatcg
      721 atcccaccca tccaccggga aacgaagtcg agctctcgcc cgagcagcag cggatcctgc
      781 cgctgttcga cggcagccgg gatgtccgcc aggtgatcga cgagtgctcg ctgatcgagt
      841 tcgacgcgat ccaggcgctc tacggcctca tcaccgccgg ctacgtgcgc cgagcgggca
      901 cctcggccaa gccggtggtg ccgcgggcca acgatacccg ggtgcaggag caccgcaatc
      961 tcggcatcgc cttctacaag accggcatgc tcgacgaagg acagcgcgaa ttccgccggg
     1021 tggtcgacct cagcccggac gatgccggcg ccccgttcta tctcgggctc atcgcgctca
     1081 agcaggcccg gtggctcgag gcggtcgaca ccctccagca ggcggcggag cggagtggcc
     1141 ggcgggcggc ggcgctccac aacctggcgt tcgcgttcga gcagctcggg cggctggccg
     1201 aagccgaggc ggcgtacagc gaggcggcgg ggaaggcgcg ggaagatccg cgcatcatgc
     1261 tgggctgggg cgtcaccgcc ctcaagcgga acgacaccga ggtggcggtg agccggctgc
     1321 agcgggccgg cgaactgctg ggcgatcgcc agcggccgcc cacctggtac tgggcgatgg
     1381 gcctggcggt ggcctgccag ggcgacctca acgaggcgat cgacatcgcc acgaagggcg
     1441 tcgaggtgca cgggaacagc gcggtgctgc gcaacaacct ggcggtgctc caggaactgg
     1501 ggagcgacct gggcgcggcg gagatgatgc tccgcaacgc cctgagcgag gacccgaccc
     1561 tgccgcaggt ctccaagaat ctgggcgacc tgctgtaccg cgccgggcgc tacgaggacg
     1621 ccttcgaggc ctacgagcgg gccgccaaac tcaaccccga cctgggcgac gatctctact
     1681 tcaagatggg gaacatcgca ttcaagcgcc gcgaccggga acgggcgcgt acctgctggc
     1741 ggcgggtgac tgagctcaac ccaggccacc agctggcgcg ggcgaacctc gataccctgg
     1801 atgccagcgc gtgacgctcc acgaggatcc cggtttcgac gcgctggccc tgcggattgc
     1861 ggggcaggcg gggctcgacg tgagcgccta caaggaccgc tgcctccgcc ggcggctggc
     1921 ggtgcggatg cgggcctgtg gggtgcacac ctacaccgac tacctcgccg tgctggatcg
     1981 ttcgcccgag gagttcgagc ggttgctcga tgcgctgacg atcaacgtca ccaagttctt
     2041 ccgcaaccgc gagacctggg acacgctggc cgccggtccg ctgcccaagc tgctcaaggc
     2101 gcgcgaaggg cggctgcggg tctggagcgc gggttgctcc tcgggcgaag agccctacac
     2161 catcaccatg ctgatggtgc tggtgctgga gcagatgggc cgcgccggct ggctcgaccg
     2221 gatccgggtc gacgcgaccg atttcgacaa ggcctcgctc gataccgcac gggccgcgcg
     2281 ctatccgctc aaggcgttca gtgaagcggc cgaggaaatt ccgagacggt tctgccggcc
     2341 ggtcgacgcg gacacggtag aggtgctgcc cgagctccgg gccatggtgc atttcctccg
     2401 gagcgacctc ctgcgcgagc cgcccccttc acccccttac gacctcatct tctgccgcaa
     2461 cgtggtgatc tatttcgacc gggggacgca ggagcagctg atgctgcgct tcaccgaggc
     2521 cctggccccc gggggcatcc tggtcctcgg caaggtggag acgatcttcg gcccggcccg
     2581 cgagcggctg gaactggtcg atccgcgcga acggatttac cggcgggcgg cctgatggcg
     2641 gaagagctga ttgtccgggt ggctgacctc cgggtcggcc gcggcgatgt ggtgctgctc
     2701 actcttggcc tgggcagctg catcgccatc gcggtgcacg atcccgcggc cgcggtcggc
     2761 ggtctggcgc acatcctgct cccgtcacgc tcgctgagcc gcggggccga gaacccgggc
     2821 cgcttcccgc agaccgcgat cccccggctc ctggaagaga tggtggccct gggcgcggat
     2881 ccgcggcggc tggtggcgaa actggtcggc ggcgccagca tgttcgccaa cctggtgcca
     2941 gccggttcga tgcagatggg cgatcgcaac gtgatctcgt ctcgcgaagt gctgcaccag
     3001 ctggccattc ccatcgtggc cgaagcggtg ggtggcaacg aaggccgctc ggtgtggttc
     3061 cacgtcgcac agggcaaact gcaggttcgc tcggtcggcc atggtgtcca gctcctctga
     3121 gctgcctggc gtcctggtgg tggacgacag cccgttcttt cgccggctgg tgagtgagct
     3181 ggtgacggga tcgggagagt tccgggtggt gggcaacgcc agcaacgggc aggaggccct
     3241 ggagcaggtc cacgcgctcc agcccgacgt ggtgacgatg gacatccaga tgccggagct
     3301 caacggcctc gatgccatcg gctacatcat gtcggagtcg ccccggccga tcgtcgtggt
     3361 gagcgcccat gccgggcagg gttccgcggc ctcgatccgg gcgctcgagc ttggcgcggt
     3421 ggaagtggtg cccaaggacg acgggcaggg ccaggtctcg gcgctccgga tcgcgccccg
     3481 actcatcgag gcgctcaggg cggcgctggc cgccgatgtg cggaaggtgc cggtgctggc
     3541 ccgtcctcgg gcgagtggcg ccttcacccg gtttgcccgg cccgccggcg aggcccggcg
     3601 ctgtctcgcc atcgcggcga gcaccggtgg cccgcgcgcc ctggccgagc tggtgccggc
     3661 gctggccgtg ggactcgaag cggcggtgct gatcgtccag catatgcccc cgggatttac
     3721 ccggagcctg gcggagcggc tggacgggct ctcggcccac aaggtggtgg aggctgcggc
     3781 cgacatggaa gtgcggagcg acaccgcgta catcgcgccg ggcgactatc acatgcgggt
     3841 ggtgcccacg cccacggggc tccggattgc gctggaccag ggcccgaccg tctggggcgt
     3901 gcgccccgcg gcggatccgc tctttcactc ggtggcaacc atcttcagcg ccgccgcgat
     3961 cggagtcgtg ctgaccggac tcggcaagga tggtgcggcg gggctgcgtg cgattcacga
     4021 tcgcggggga gtgggcatcg cccaggacaa gggcacgtcc accatctacg gcatgcccgg
     4081 cgccgcgctc gaggctgggg gcgccgacct ggtcctgccg ctcggcgcga tagccgaacg
     4141 ggccggggcg ctgctgcgcg aggtgccgcg ccgatgagcc gaggggtact gctggtgacg
     4201 agcggcggac ggcggatggg tttgccgctc caggggatcc tggaagtcgg cgacgtgccc
     4261 gcggtcgaac gggtgccggg ctccgccccg gcggtgcggg gggtgatgcg ggcccggggc
     4321 cggctggtgc cgctggcaca cctcggagcc ctggtgagcg ggaaggcctg cccggcgccc
     4381 acggccgaac gctcggctgt cctcgcaacg gtggcagacc gatggctcgc gctcgaagtg
     4441 gagcaggtcg acgccgcgcc cgatgaagtg gtgctgccgc cgcccgaggg ttccgccctg
     4501 gcggaactca ccgtgggggt ggtgcggcgg gaccaacact ggattccgat actcaatctc
     4561 gaggccctgg ccgaacggct ccagggcgag ggaggcggca ggtaagatgg cagccaccac
     4621 aacctccggg gacgaactcc agttcgtcgt cttccggctc ggctcgcagg agttcgggct
     4681 cagcatcttc caggtcgagc gcatcctgcg ctacgagcag ccggcgtcgc tgcccaacgc
     4741 ccccgatttc ctggagggcg tgctgcccta cggctcgggg gtggtgccgc tggtcgatct
     4801 gcgcaagcgc accggtctgg ccgccgaata caaggaagag acccgggtga tggtgctctc
     4861 gttcgaggag caccacgtcg cggtggtggt cgaccaggtg gtggaagtac tgcgggtgga
     4921 cgcgcggact atcacccagc cgccgccgat ggtccgcggg ctcgcggccg agtacatcag
     4981 cgggatcatc agccggccct cccgcacgat cgtggtgctg aacgccgccc ggctgctcag
     5041 cagtaccgag cggctggctc tgacggaggc aatgccgtga ccgatcccac gcccccggcc
     5101 gacccgatcg tccaggccta ccggcagcag taccaggaga tcgcggcccg gctggagaag
     5161 gcctcgggcg gcgtcgagcg cgagacggtc aagcgcgaga tcatcgcctt cttcaagcgg
     5221 gtggataccg cgctcaccga cctcggactg gtgaaggaag agatccggct cctggtcgac
     5281 cgctacaagc agatggccgc cgcaaccgaa acggcccagg ccccccagtt caccggccag
     5341 cgcccggtgg tgcagcagga ccacctcggc gcctcgacct acatcgagaa gggatggagt
     5401 ctgatctcgc tgggcgacta cggcggcgcg atccaatcgc tcaccaaggc cctggccctg
     5461 gcaccctccg agatccaggc gcagtcgctc ctcggctggg cgcagatgct gcacgaggac
     5521 tacgacgacg ccctggccac cttctccaag gtgctgatga aggagccggc caactcactg
     5581 gcccggatca acgtcggata catctgcctc aagaagcgga tcttcggcga ggcgatcgag
     5641 cacctgtcca aggccatccg gctcgacaac gaccgcaagg ccacgctcta cgcccactat
     5701 tacctggggc tggtatacct ggagcgggag atgttcgagg acgcggtgac cttcttcaac
     5761 aagaccctga cgctgggccc caacctgatc gaggcctact acgagctggg ccgggccaac
     5821 tggttcatgg gcgaccaggc cgcggccagg caggcgtgga ccgacggctt caaggccaac
     5881 aagttcaatc cctggggcaa gcgctgtaag gagatgctgg ataccacggc agcggggggc
     5941 gagcctccca gataggtttc gtctccgggt tgtcatcccg acggagcagc gcgaccgggg
     6001 gatccctgct tctgacgatc agggatccct cgcttcgctc gggatgacaa ggccaacggc
     6061 gtcatgctcc tcctcctgct ccagctgctt gccaccgact ccacccgggt cggttcggtc
     6121 accatcattg ccagcgcggc ccagcagcag tttgccaccg cgctggcgcg ggaagctcag
     6181 aagccggtcg actggccagc gctggggcgc cgtattcctc cccccttcac gctggtcctg
     6241 gctcccgatt ccgcctcgct ggcccgcatg acccgcggtc aggcgccggg ttggggcgcg
     6301 ggcgtcacct acccggaatc ccgcaccatc atcctccggg ccgaccttcc cgacgtgccc
     6361 cagaccctgc ggcacgagct ggcgcacctg gtgctgcggg agagggtgca gggccggctg
     6421 cccctctggt tcgaggaggg gttcgcggca tggggatcgg gggaggtgag ccgctccgaa
     6481 tcgatcgagc tcaacctggc ggtggcggca gggcgggtgc ccccgttcag cgccctcgac
     6541 gcgatgctcc ggagcagccc atccagcgca gacatcgcct acgcgctggc tcaatcggcg
     6601 gtcgcggaga tcgggcgcca cggtccaccc gggggactgg agcggctcct cggccggctc
     6661 gaggcggggg taccattcga ttccgcgatg gtggtgtcga ccggtctcac cgtcgatcgc
     6721 ttcgaagaga catggcaggc cgccctcaag cggagatatg gccttctcac ctggctggtt
     6781 gccgggggga tgtggaccgt gatcgccttc ggtctcggcg ggctggcctg gtatcgacgg
     6841 gagcgtgacc ggcctcgccg cgcggcactc gatcatgggt ggataattgc ggacgaaggc
     6901 gcggcaggcg gccccagcag tccaacgccg ggggtggtgg aaggccaccc ggagggaggc
     6961 cccgttgacc cacgggacgc accgaagtaa gctcaacccc catgccgagt tccgactccg
     7021 ccgtctccgg ccgcaaactg cggtttggcc gccgcaatgt catcctgctg ggggcggcgg
     7081 tcgtctccct cgtggcaggg tacttctggc tcaacgccgg cggaacgact ggcgcagccg
     7141 ccctgctggt actggggtac tgcgtcctct tcccgctggg tattgcactc tagcgcggac
     7201 acccgcggta caacccggtc acactcaggc gctggccgcg tcccgggtga accgtgcttt
     7261 gtcgctttct ggggcgaata gctcagctgg tccagagcgc ctgccttaca cgcaggatgt
     7321 cgggggttcg aatccctctt cgcccactct tcacctgacg gtacgccagt tgcgtttgta
     7381 ccgcccgacc ctctctccgg agaccgtctg atgcgcgtag tacgtctgat cacacttttg
     7441 gcgctcgccg ccgtgccggc cgtggtgcag gcccagattc ccacccggcg gcagccgacg
     7501 gcgagcagca ccagcaacag tccgcgcctc ctggtcggca atccccacag cttcaccgcg
     7561 gccgactcgg caccttcggt ggcggcgggt gagggccttc gcacccgcat cgacaagctg
     7621 gccggcggtc agttccgggt gcttacgcgc caggagatga acgaggccct caagcagttc
     7681 ggctacccgg ccgacgcgat cctggcgccg ccgacccaga aggtgctggc ccagtcgctc
     7741 aactcccggg tcgtggtcat cagcaccctc ggcaaggatg cctcgggcaa gtacgtggtg
     7801 acctcgcgcc tctccggcgt gaacgacgac gccggcaacg tggtgagcgg cacccaggtg
     7861 gcgggccagc agatggccga cctcgggggc aaggtggccg atggctttgc gccggcgatc
     7921 aagtcgtgga acgatgccaa gggctgcgtg gagcagtcga agaccgcgcc ggccaaggcc
     7981 gccgaagccg ccaagaaggc gctggcggtg atgccgaaca gcgggctcgc caactactgc
     8041 atgggcatgc tggcgctcgg ccgcgggaac aaggccgaca gcgccgaagc gatgcggtcc
     8101 ttcggcgaag cggtgaaggg cgatccgctg agcctcgcgg cgtggaccca gctggccgcg
     8161 ggctacgaag tggcgggcga taccgccaag accatcgacg cgctgcagca gatgctccgc
     8221 atcgcgccga ccaacgcgcc gctccgcgac ctggtgttca agaagctcct tgcc
//
LOCUS       DATIFF010000401         1254 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_53615, whole genome shotgun sequence.
ACCESSION   DATIFF010000401 DATIFF010000000
VERSION     DATIFF010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53615"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..498)
                     /locus_tag="VLD58_06125"
     CDS             complement(<1..498)
                     /locus_tag="VLD58_06125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53911.1"
                     /translation="MILVVAVALIALSVTFAVLFLGEVAPGRQSALGARLSELEGADP
                     QAAETIRKRRRQLRAEKMTALVQALGERLEPGRKDIPAIRLRMLQAGFPSPSAVPVFL
                     GSRIALPIAMGFSAVTILGFLGMTSFAGLIATIWFAALGYIAPSVYVNGRIRGRQKEM
                     QRALPD"
     gene            complement(506..>1254)
                     /locus_tag="VLD58_06130"
     CDS             complement(506..>1254)
                     /locus_tag="VLD58_06130"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HSB53912.1"
                     /translation="PRLGDLGFLIQQAGVSWSANTLLLLCLGLAAGLFLAVLTITRFL
                     PFAGIAAAFGTYLPIWYLRRRRRKRADAFEAGLPEAIDLLGRAIRAGHPLSAGLKMVA
                     DEAREPISGEFQRTFEEQRFGLPFDDAIIAMADRVNLVDVRILVTAILIQREVGGNLA
                     EVLDNLASVIRMRFTIRRQLRVYTAQGRFTGYTLAVLPIIVGSVIYMLNPPYMRLLFT
                     HPMGKLMVAIAAVMQVIGYLWIRKIVDIEI"
BASE COUNT          213 a          428 c          440 g          173 t
ORIGIN      
        1 gtccggcagg gcgcgctgca tctccttctg gcggccgcgg atccgtccgt tcacgtaaac
       61 cgacggcgcg atgtacccca gcgcggcgaa ccagatcgtc gcgatcaggc ccgcgaagct
      121 cgtcatcccc aggaacccca ggatcgtcac cgcgctgaag cccatggcga tcgggagcgc
      181 gatgcgggag cccagaaaga ccggcaccgc cgaggggctg gggaacccgg cctggagcat
      241 ccggagccgg atggccggga tgtcctttcg gcccggctcg agccgctcac ccagggcctg
      301 caccagcgcg gtcatcttct ccgcccgcag ctgccggcgg cgcttgcgga tcgtctcggc
      361 ggcctggggg tcggcccctt ccagctcgga cagcctggcg ccgagcgcac tttgccttcc
      421 cggcgccacc tcgcccagga acagcacggc gaaggtgacg gagagagcga tgagcgcgac
      481 ggcgacgacg aggatcacaa gggcctcaga tctcgatgtc cacgatcttg cggatccaga
      541 gatatccgat gacctgcatg acggcggcga tggccaccat cagcttgccc atcgggtggg
      601 tgaacaggag ccgcatgtag ggcgggttca gcatgtagat gaccgagccc acgatgatcg
      661 ggagcaccgc cagcgtgtag ccggtgaagc gcccctgcgc cgtgtacacc cggagctggc
      721 gccggatggt gaaccgcatc cggatgacgc tggccagatt gtcgagcact tcggccaggt
      781 tgccccccac ctcgcgctgg atcaggatgg cggtcaccag gatccggacg tccaccagat
      841 tcacccggtc ggccatggcg atgatggcgt cgtcgaacgg gaggccgaac cgctgctcct
      901 cgaaggtccg ctggaactcg cccgagatcg gttcccgggc ctcgtcggcc accatcttga
      961 ggccggcgga gagcgggtgt cccgcgcgga tggcgcggcc cagcagatcg atggcctcgg
     1021 gcagcccggc ctcgaacgcg tcggcccgtt tcctccgccg ccgcctgagg taccagatgg
     1081 gcaggtaggt gccgaacgcc gcggcgatac cggcgaacgg caggaaccgg gtgatggtca
     1141 gcacggcgag gaacaggccc gccgccagtc cgaggcagag cagcaggagc gtgttcgcgc
     1201 tccacgagac cccggcctgc tggatcagga atccgaggtc gccgagccgc gggg
//
LOCUS       DATIFF010000402        11617 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_53672, whole genome shotgun sequence.
ACCESSION   DATIFF010000402 DATIFF010000000
VERSION     DATIFF010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 11617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11617
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53672"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(145..1887)
                     /gene="kdpA"
                     /locus_tag="VLD58_06135"
     CDS             complement(145..1887)
                     /gene="kdpA"
                     /locus_tag="VLD58_06135"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: protein motif:HMM:NF015753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HSB53913.1"
                     /translation="MTANAWVQLALYLAVLIGLARPLGGYMARVYQGEPHPLARWFAP
                     VERLCYRWMGVKPQEEMDWKRYSAAVLLFSLAGFVVVYALQRLQGALPLNPAHMGPVE
                     QKVAFNTAISFVTNTNWQAYGGEATMSYLTQMLGLTVQNFVSAATGMAVLIAFIRGIS
                     RHETNQLGSFWADLVRGTLYILLPLSFVLALALVSQGVVQSFSPYRTVPLVEALGPDS
                     ARATTQVLPMGPAASQIAIKQLGTNGGGFFNVNSAHPFENPTAFANFLELLAILVIPV
                     ALCCTFGKMIKDTRQGWAILAAMTIVFVGLLIPGVLAENAHHPGYAALGIDQAPSAMQ
                     AGGNMEGKEVRFGITNSALWATATTAASNGSVNSLHDSYMPLGGLVPLWLMQLGEIIY
                     GGVGSGLYGMLLFAIITVFIAGLMVGRTPEYLGKKIEAYEMKMASLAILLPNLLTLFG
                     TALGVATQAGRAGPLNPGAHGFTEILYAFSSMSNNNGSAFGGLTATNWLYALLGGIAM
                     WASRFWIIIPTLAVAGSLGRKKLIPASAGTLETHTPLFVVLLVGTVILVGALTHLPGL
                     ALGPIVEHLQLFAR"
     gene            complement(1884..1973)
                     /gene="kdpF"
                     /locus_tag="VLD58_06140"
     CDS             complement(1884..1973)
                     /gene="kdpF"
                     /locus_tag="VLD58_06140"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR02115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
                     /protein_id="HSB53914.1"
                     /translation="MLLNIVVGVIALLLLIYLFVALLKPERFS"
     gene            2251..3411
                     /locus_tag="VLD58_06145"
     CDS             2251..3411
                     /locus_tag="VLD58_06145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HSB53915.1"
                     /translation="MPETLSPVPLTQLSEEEELFRATVREFAETEIKPHVHEMDEAAK
                     FRPELIQKFFDLGLMGIEVPEQYGGAGGTIFLATLAIEELARVDASAAIYVDVHNTLV
                     NNALLRWGSPEQKAALFPRMTTGLLGAFALSEPASGSDAFALETKAEDKGSHWELTGR
                     KFWITNGGEAGLFLVFANSDFSKGYKGITAFLVERDFPGFSVGKKENKLGIRASSTTE
                     LILEGCKVPKANVLGPVGQGYKIAIETLNEGRIGIGAQMLGVAAGALEAAVGYVKERK
                     QFGKPIAEFQGVQFQLAQMATELEAARLLVYNTARLKDSGQPFSREAAMAKLYSSQMA
                     DRTTSRCLELFGGYGYSKEYPAEKFYRDAKIGTIYEGTSNMQLSTIAKNLLK"
     gene            3805..5331
                     /gene="dacB"
                     /locus_tag="VLD58_06150"
     CDS             3805..5331
                     /gene="dacB"
                     /locus_tag="VLD58_06150"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HSB53916.1"
                     /translation="MRHVTQRVYLGLLVAALLGAGRPARAHAQELPQDLKLKLDRWYR
                     SARRSANGTWGIAVADQTGQILWSVNPDRELIPASTVKLLTTGYARSVVGGEARRTTR
                     VVGFGSLDDATGDWNGKWALELNGDPTLESPDGRGPRLADLALQLYEKGVRRLHGPLT
                     VVTADGQPAEASFPDVWRAGNRGSIYAPLIGSLTLHENLIMLYVQPGQRPGARPRLIS
                     TSPDGLDALVNVHATTASGRRSALRIRRMADGGYLVTGSVGVNAGTRRLVSTASDTKA
                     VLAAAWARALQQQGIEWDRTPPEITVENEPTDVLAEIESAPFDSVALEINRRSLNIGA
                     ELLLRWAAGKTGGPELLTEHVQQVAGVAGGVKLVDGSGMSHEDRVTPATFISYMAHVQ
                     STPAGKNFPYLLPANGQGTLARLASGLPDLGVVRAKTGTLSGVSTLVGYLGRRDGMFL
                     VSLMYNGPRSKSAKRHQWQVFRLLGAEGVTIPADDSSDTGEEPEEAPEAPMGGDPVGN
                     "
     gene            5473..5964
                     /locus_tag="VLD58_06155"
     CDS             5473..5964
                     /locus_tag="VLD58_06155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53917.1"
                     /translation="MNPAHLHLMLNHLPVVGVPLVAALLCWALLRRSREIYRVALGAS
                     VILAALTYPVFLTGEPAEERVEDASWMRERLVHEHEERAEAALIAVLVTGAMAAFGLW
                     QTRGDRKPNFGMGGLTLAGLVVSTGLLAWTAQLGGPIRHDEIRAETTATAPAAAQPRD
                     NDD"
     gene            5977..6666
                     /locus_tag="VLD58_06160"
     CDS             5977..6666
                     /locus_tag="VLD58_06160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSB53918.1"
                     /translation="MRLLLVEDEARLADSIARGLRQAAHAVDQADRLSVAREKLALED
                     YDAVILDLNLPDGSGFSLADELRHRQVPTPILMLTARDSVEDRVRGLDSGADDYLVKP
                     FAFDELLARLRALQRRQPEAQPVVLTIEDLVVDPASRSATRAGIPIELTNTEYALLEY
                     LARHPGRVCGRATISAAVWDENYDPMSNIIDVYVSRLRRKVDRPGMQPLIHTVRGAGY
                     TLDPARGRKAQ"
     gene            6663..8060
                     /locus_tag="VLD58_06165"
     CDS             6663..8060
                     /locus_tag="VLD58_06165"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSB53919.1"
                     /translation="MSALTLRARLALVFAGTFALLLLAGGALLYYQLVRGYVRDFDHD
                     LRDGVRAARSVLSLDRPEFPTRDQAVVHTIGELIYGDRTIVAFRPGGAVLAVSRRIPD
                     HPQFDDVPLTLPVEEPTTLDLREGQARAVRAPLSEDIDLILALDTAPLQHQMARLRMA
                     LFTGLPFILIVGGVLGAWGSGVVLRPVVDVARAAEQVGQEVASGSVGFTPLPPRDADD
                     ELATMTESLNLLISRLAGALAEERRVAEQQRQFLADAAHELRTPVAILRSEAEVALKS
                     GSPADARAALSRIAAESISLSELVGDLLLMARSDAGALSARKERVYLDDLASTVMSRA
                     ARLPQAAGREIRGDQFEEAPVLGDPVLLERAILVLVHNALVHGAGPVHLSSGVRSEGG
                     KQWCCLTVRDEGAGIPPEARARIFERFSRLDRGSAGAGLGLAIARSIAEAHGGSLILT
                     DTTPGAEFQLRIEKA"
     gene            complement(8063..8779)
                     /locus_tag="VLD58_06170"
     CDS             complement(8063..8779)
                     /locus_tag="VLD58_06170"
                     /inference="COORDINATES: protein motif:HMM:NF021604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HSB53920.1"
                     /translation="MTAHEWFIEHRSALVARTLEPDEERLFHEHLPGCAECRAEVERL
                     ERELAWLPMGATPVTPRPGLTRSLVEGAIGRRRPSRAWLLPAALAASLVLVAGAWRNE
                     RGALRAERDALRHELTMVRDTLGIIQSAAKVRYASITMGQHQGGLVIFADERTHRWNV
                     VVYGLPAPAPGEVCQFWFITDEGMVRSVEVQAAQHGPAFMTLPMPPRGGTVMGAALTI
                     EPAGSSGDQPKGTELAHLMM"
     gene            complement(8776..9411)
                     /locus_tag="VLD58_06175"
     CDS             complement(8776..9411)
                     /locus_tag="VLD58_06175"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSB53921.1"
                     /translation="MNESASRPRATGRAPAEGRMLSLEREASLQRRLLSRDETALAEL
                     VEVMTPWLLGLAQGMLSDRDEAEEVVQEAFAIVWRRVDLFDQESGRLVPWLLRITRNR
                     AIDRLRARRRRRLKAERLRAETAGHDALPAVEPNEAAHPGWQVHQQVHAAIEALPADQ
                     LQVVRLAYFEGLTHSEIARRLGIPLGTVKTRLRLALDKMRTGLASIRDWVL"
     gene            complement(9544..9969)
                     /locus_tag="VLD58_06180"
     CDS             complement(9544..9969)
                     /locus_tag="VLD58_06180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53922.1"
                     /translation="MNRVFAFSVIGLGALLAVGACNSDEATATEDHTPVRMLLIVGTD
                     TMTTDTLFLPAGGNVTVRGSFYTAADDNLDDHEGEHWSRLTFNPGTLATAAVDSAHHY
                     SHEVTVQGAAGSTGTVEVGYGHDVLADEHTLSAPVKIIP"
     gene            complement(10001..>11617)
                     /locus_tag="VLD58_06185"
     CDS             complement(10001..>11617)
                     /locus_tag="VLD58_06185"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HSB53923.1"
                     /translation="SPLYGNFAVGGAVEVNSAQDATGLAGSVGGSNYGDAAGWVRGGA
                     RHENSGYLFAIQGERGQGWRDNSTSGLGNLQFRGWKRLDARTRLEGGFTGYGSGWDSP
                     GFLSVADYNAGHLQRAADPTDGGWSGRGILHGRIARTLASGSSIDLLGWVQAGRSTVF
                     LTVPDDGAAEQQEERDSRSAVGFSGYWRVPTSNGEAWAGVGGRADWDTYDLYHTDRRE
                     RLLATQLTTGRYQEANAYLRTRGLAWSRLQYDLSVRGDILRYASEDRLEADSRLRDNI
                     SAVLSPKFGARYLLGGGWSAVASINRGFRGPVGVIEDVRQPLVTAWAKEVGIELATGR
                     VSVQVSAFQTDVRNEKILDPVTLQISDAGSSRRRGFSGHLGVQLTPRLRFSAEGTFND
                     AKITGSNGTGGAVLVASVVGDSAIGFPIPPIANHVEPLTPGSHIPGVSRYLGRVEAEY
                     QVSQQFAPRLTVRFNGPFTPIGEDGVRTKAYMVADMGASVGLAPRTVLDIELQNLLDT
                     RYPEIRASGFLNPGTPRTLRAAIRYSPASL"
BASE COUNT         1931 a         3966 c         3892 g         1828 t
ORIGIN      
        1 aggagactgc ccacctccac cacgaacatg accgggttcc gaagcatgtg gagcgggttc
       61 agcttcacga acgagtcgag gatcgcgcgc cgggcgatgg gaccgtcgaa cagggaccgt
      121 gtgttggcgt gagacatgtg ccggctacct cgcaaacagc tgcaagtgtt cgacgatggg
      181 tccaagcgcc agtccgggca gatgggtcag cgcgccgacc aggatcacgg tgccgaccag
      241 cagaaccacg aacagcggcg tatgggtctc gagcgtgccg gcgctggccg ggatcagctt
      301 cttccggccg agtgagcccg ccacggcaag tgtcgggatg atgatccaga agcgcgacgc
      361 ccacatggcg atgccgccca gcaacgcgta cagccagttg gtggcggtca gtccgccgaa
      421 cgcgctgccg ttgttgttgg acatcgacga gaaggcgtag aggatctcgg tgaagccgtg
      481 cgctcccggg ttgagcggcc cggcccggcc ggcctgggtg gcgaccccga gggcggtgcc
      541 aaagagggtc aggagattgg gtagcaggat ggcgaggctc gccatcttca tttcgtatgc
      601 ttcgatcttc ttgccgagat attcgggggt gcgtccgacc atcagccccg cgatgaagac
      661 agtaatgatg gcgaagagca gcatgccgta gaggccggaa ccgacgccgc catagatgat
      721 ctcgcccagc tgcatcagcc acaggggaac cagcccgccc agcggcatgt acgagtcgtg
      781 cagcgagttc accgacccgt tggacgcggc cgtggtggcg gtggcccaga gcgccgagtt
      841 ggtgatcccg aagcgaacct ccttcccctc catgttcccg ccggcctgca tagcgctggg
      901 cgcctgatcg atgccgaggg cggcatagcc cgggtgatgg gcgttctcgg ccagcacacc
      961 cggaatgagg agtcccacaa agacgatcgt catcgcggcc aggatggccc atccctgacg
     1021 ggtatccttg atcatcttgc cgaaggtgca gcagagcgcc acggggatga cgagaatcgc
     1081 cagcagttcg aggaagttgg cgaaggcggt ggggttctcg aacggatgcg ccgaattcac
     1141 gttgaagaag ccgccgccat tcgtgcccag ctgcttgatc gcgatctggg aagcggccgg
     1201 ccccatcggg agcacctggg tagtcgcgcg ggcactgtcg ggaccgagcg cctcgaccag
     1261 gggaacggtc cggtagggcg agaagctctg caccacaccc tgggagacca gcgccagggc
     1321 cagcacgaac gaaagcggca gcaggatgta cagagtcccg cgcaccaggt cggcccagaa
     1381 gctccccagc tggttggttt cgtgccggga gatgccccgg atgaacgcga tcagcaccgc
     1441 catcccggtg gcggccgaca cgaagttctg caccgtcagg cccagcatct gggtgaggta
     1501 actcatcgtc gcctcaccgc cgtacgcctg ccagttggtg ttcgtgacga agctgatggc
     1561 ggtgttgaac gcgaccttct gctccaccgg ccccatgtgc gccgggttga gaggcagggc
     1621 accctggagg cgctgaagcg cgtacaccac tacaaatccc gcaaggctga acaacagcac
     1681 cgcggcggag tatcgcttcc agtccatctc ctcctgcggc ttgaccccca tccagcgata
     1741 gcagagccgt tcgaccggtg cgaaccagcg tgcgagcggg tgaggctctc cctggtacac
     1801 tcgtgccata tagccgccca gcggcctggc aagcccgatc aggaccgcca ggtagagcgc
     1861 cagttgcacc cacgcattgg cggtcatgag aacctctccg gcttgagaag cgcgacgaag
     1921 aggtagatca ggagcagcag ggcgattaca cccaccacga tgttgagcag catggcctca
     1981 caccttgtcg cacaggcgaa ccaggcccca gctcagcagg cccaggacaa ccacgaggag
     2041 gagcatcagc aggtccacag gacgtttccg agttccggtt ccgggtttca ggttccgatc
     2101 tccgtgcctg caaactgggg ccggccgcat caagcaggtg tccggaagga cgtgccggat
     2161 atcaagaccg catcaagacg caccccggtc gggcaggctg taccgccggt gagcagcccg
     2221 gttaacttct cggctgaccc gaggagcatt atgcccgaga ccctgagccc cgtgccgctc
     2281 acccagctct ccgaagagga agagctcttc cgtgccaccg tccgtgagtt cgccgagacg
     2341 gagatcaagc cccacgttca tgagatggac gaggcggcga agttccggcc ggagctgatc
     2401 cagaagttct tcgacctggg gctgatgggg atcgaggtgc cggagcagta cggcggcgcc
     2461 ggcggcacca tcttcctcgc caccctcgcc atcgaagaac tggcccgggt ggatgcctcc
     2521 gcggcgatct acgtcgacgt gcacaacacg ctggtgaaca acgccctgct ccgctggggc
     2581 agcccggagc agaaggccgc cctcttcccc cgcatgacca ccgggctcct gggcgcgttc
     2641 gcgctgtccg agccggccag cggcagcgat gccttcgccc tggagaccaa ggccgaggac
     2701 aagggctcgc actgggagct gaccggccgg aagttctgga tcaccaacgg cggcgaggcg
     2761 gggctcttcc tggtcttcgc gaactccgat ttcagcaaag ggtacaaggg catcaccgcg
     2821 ttcctggtgg aacgcgactt ccccggcttc agcgtcggca agaaggagaa caagctcggc
     2881 atccgcgctt cgagcaccac cgagctgatc ctcgaaggct gcaaggtccc caaggcgaac
     2941 gtcctcggcc cggtggggca gggctacaag atcgcgatcg agacgctcaa cgaaggacgg
     3001 atcggtatcg gggcccagat gctgggcgtc gcggcagggg cgctcgaagc ggcggtgggg
     3061 tacgtgaagg agcggaagca gttcggcaag ccgatcgccg agttccaggg agtgcagttc
     3121 cagctggccc agatggcgac ggagctggag gccgcccgcc tcctggtcta caacaccgcc
     3181 aggctcaaag acagcggcca gccgttctcc cgcgaggcgg caatggccaa gctctacagc
     3241 tcgcagatgg ccgatcgcac caccagccgc tgtctcgagc tgtttggagg ctacggttac
     3301 tcgaaggagt acccggccga gaagttctat cgcgatgcca agatcgggac gatctacgag
     3361 ggcaccagca acatgcagct ctcgacgatc gcgaagaatt tgttgaagta ggtcgagagg
     3421 tcattggtcg agggtctagg gtcatgggtc gaggggatca cccttgaccc ttgacccttg
     3481 acccttgacc ctcgaccctc gaccaaagtc acacggctac ttatttgttc agggttagtt
     3541 gatcgagtag caccagccca gtacgttgca aaggtgaacg ccgccttacc ggcccgcccg
     3601 catcgctgta cccttggaac gctggttgca atactcccgt gagaataccg gctgcgcagc
     3661 ggcgtattac gtggtaaccg catgctaagt cactatttgc cggaaatccc gtaggacacg
     3721 aaacatcgcg gtccgtgcgg caagcttggc cggttcggca actcgcccgg gtcactagta
     3781 ccacctccga cgtccggagc gactgtgcgc cacgtcactc aacgcgtgta tctcggcctc
     3841 ctggtcgccg ctttgctcgg cgccggccgt ccagcgcgtg cccatgctca ggaactgccg
     3901 caggatctca agctcaaact cgaccgctgg taccgctcgg cccgccgcag cgccaatggc
     3961 acctggggca tcgctgttgc cgaccagacc ggccagatcc tctggagcgt caatcctgac
     4021 cgcgagctga tcccggcgtc caccgtcaag ctgctcacca ccggatacgc ccgctccgtg
     4081 gtgggcgggg aagcccgccg taccacccgc gtggtcggct tcggttctct ggatgacgca
     4141 accggcgact ggaatggcaa gtgggccctg gagctcaatg gcgatccgac gctcgagtct
     4201 cccgatggcc gcggtccccg tcttgccgac ctggcgctcc agctctacga gaagggtgtg
     4261 cggcggctgc atggcccgct caccgtggtc accgccgatg gccagccggc cgaggcgagc
     4321 ttccccgacg tgtggcgcgc cggcaatcgt ggcagcatct atgccccgct catcgggtcg
     4381 ctgacgctgc atgagaacct gatcatgctg tacgtccagc cgggccagcg ccctggtgcg
     4441 cggccccggc tgatttcgac ctcccccgat gggctcgatg cgctggtgaa cgtgcacgcc
     4501 accaccgcca gcggccggcg ctccgcgctc cgcatccgcc gcatggccga cggtggctac
     4561 ctcgtcaccg gctcggtcgg tgtgaacgcc ggcacccgcc gcctggtctc gaccgcatct
     4621 gataccaagg ccgtgctcgc cgcggcctgg gcccgcgcgc tgcagcagca gggcatcgag
     4681 tgggaccgca cgcccccgga aatcacggtc gagaacgaac ccacagacgt gctggccgag
     4741 atcgagtcgg cgccattcga ctccgtggcc ctcgagatca accgtcgcag cctcaacatc
     4801 ggcgccgagc tgctgctccg ctgggccgcc ggcaagaccg gtggccccga gctcctcacc
     4861 gagcacgtgc agcaggtggc cggtgttgcc ggcggcgtga agctggtgga cggcagcggg
     4921 atgtcccacg aagaccgcgt gaccccggcg acgttcatct cctacatggc gcacgtgcag
     4981 agcacgcccg cggggaagaa cttcccctac ctgctcccgg ccaacggtca gggcacgctg
     5041 gcgcgtctcg cctccgggct gcctgacctc ggcgtggtcc gcgccaagac cggcacgctg
     5101 agtggcgtct cgaccctggt cggctatctc ggccgccggg acggaatgtt cctggtgagc
     5161 ctgatgtaca acgggccccg ctccaagtcc gccaagcgcc atcagtggca ggtcttccgg
     5221 ctgctcggcg ccgagggggt gaccatcccg gccgacgact cgagcgatac cggtgaagag
     5281 cccgaggagg cgcccgaagc gcccatgggc ggagatccgg tcggcaactg acgcctgact
     5341 gaatcagctg cagtacaccg ggggctcatc cgagccccct ttttcatccc tccttcacac
     5401 ctcccggcgg ttcatcgcca gttcatcgag gctgcatagc ttggggctca tcctgacatc
     5461 tggagatcgc ccatgaatcc ggctcacctg cacctcatgt tgaaccacct gccagtggtg
     5521 ggcgtccccc tggtggccgc cctgctctgc tgggcgctgc tgcggcgttc ccgcgagatc
     5581 taccgcgtgg ccctcggtgc ctcggtcatc ctggcggcgc tcacctatcc tgtattcctg
     5641 accggtgagc ccgccgagga gcgggtggag gatgcgtcgt ggatgcgcga acggctggtg
     5701 cacgagcacg aagagcgggc cgaggccgcg ctcatcgcgg tgctggtgac cggcgcgatg
     5761 gcagcgttcg gtctctggca gacccggggc gaccggaagc ccaacttcgg gatgggtggc
     5821 ctcacgctgg ccgggcttgt cgtgagcacc gggctcctgg cgtggaccgc tcagctcggc
     5881 ggaccgatcc ggcacgacga aatccgggcc gaaaccaccg ccaccgctcc cgcggccgcc
     5941 cagccgcggg acaatgacga ctgaaccggt gactgcgtgc gactgctcct ggtagaagac
     6001 gaagcccggc tcgccgattc gatcgcgcgg ggcctgcgcc aggcagccca cgcggtggac
     6061 caggccgatc gcctctcggt cgcgcgggag aaactcgccc tcgaggacta cgacgcggtc
     6121 attctggacc tgaacctgcc ggacggttcc ggtttcagcc tggccgatga gctgcgccac
     6181 cggcaggtgc ccaccccgat attgatgctc accgcgcggg attcggtgga agaccgggtc
     6241 aggggactcg acagtggcgc cgacgactac ctggtcaagc cattcgcgtt cgacgagctg
     6301 ctggcgcgcc tgcgggcgct ccagcggcgc cagccggagg cccagccggt ggtgctcacg
     6361 atcgaagacc tggtggtcga tcccgccagc cggagcgcca cccgcgccgg gatcccgatc
     6421 gagctcacca acaccgagta cgccctgctc gagtatctcg cccggcatcc gggcagggtc
     6481 tgtggccggg ccaccatcag tgcggcggtg tgggacgaga attatgatcc gatgtccaac
     6541 atcatcgacg tctatgtctc gcgcctgcgg cgcaaggtgg accgtcccgg catgcaaccc
     6601 ttgatccaca cggtgcgcgg cgccggctac actctcgatc ctgccagggg gcgcaaggcg
     6661 cagtgagtgc cttgaccctc cgggcccggc tggcgctggt cttcgccggc acattcgcgc
     6721 tcctcctgct cgcgggagga gcgctgctgt attaccagct ggtgcggggc tacgtgcgcg
     6781 acttcgacca cgatttgcgg gacggtgtcc gggcggcccg ctcggtgctg agtctcgacc
     6841 ggcccgagtt tccgacccgg gaccaggccg tcgtccacac catcggcgag ctgatctatg
     6901 gtgaccggac tatcgtggca ttccggcccg gcggtgcggt gctggcggtg agccggcgga
     6961 tccccgatca ccctcagttc gacgacgtgc cgctgaccct cccggtggag gagccgacca
     7021 cgctcgacct cagggaaggc caggcacggg ccgtccgtgc cccgcttagt gaagacatcg
     7081 acctcatcct cgccctcgat accgcgcccc tccagcacca gatggcgcgg ctccgaatgg
     7141 cgctcttcac cggccttccc ttcatcctga tcgtgggtgg cgttctcggt gcctggggct
     7201 ccggcgtggt gctccgcccg gtggtcgatg ttgccagggc ggccgagcag gtgggccagg
     7261 aggtagcgag cggcagcgtg ggcttcaccc cgcttccccc gcgcgacgcc gacgacgagc
     7321 tcgccaccat gaccgagtcg ctcaatctcc tcatcagccg gctggccgga gccctggcgg
     7381 aagagcgcag agtggccgag caacagcggc agttcctggc cgacgcggcc cacgagctcc
     7441 gcacccctgt cgcaattctc cggagcgaag cggaagtggc gctcaagagc gggagccctg
     7501 ccgacgcacg cgcggccctc agccgaatcg cggccgagtc gatctcgttg agcgagctgg
     7561 tgggtgacct gctgctgatg gcaaggagcg acgccggcgc cctctccgcg cggaaggagc
     7621 gggtctatct cgatgatctt gccagcacgg tgatgagccg cgccgcccgg ctgccgcagg
     7681 cggccggccg ggaaatccgt ggtgaccagt tcgaggaagc gccggtcctg ggcgacccgg
     7741 tgctgctcga gcgcgccatc ctggtgctgg tgcacaacgc gctggtgcac ggtgccggtc
     7801 ccgtgcacct cagctcgggt gtcaggagtg aagggggaaa gcagtggtgc tgcctgacgg
     7861 tgcgggacga gggagccggc atcccgccgg aggcgcgcgc gcggatcttc gaacgcttct
     7921 cccggctcga ccgcggctcg gcgggcgccg ggctcgggct cgcgatcgcc cgctcgatcg
     7981 cggaggcgca tggcggatcc ctcatcctga ccgacaccac gccgggcgcc gaattccagc
     8041 tccggatcga gaaggcctga ggctacatca tcaggtgcgc cagctcggtg cccttgggct
     8101 gatctccgct cgatcccgcc ggttcgatcg tcagcgccgc gcccatgacc gtgccgcccc
     8161 gcgggggcat cggcagggtc atgaaggccg ggccatgctg ggccgcctgc acctccacgc
     8221 tccgcaccat cccctcgtcg gtaatgaacc agaactgaca gacctcgccc ggcgcgggag
     8281 ccgggaggcc gtacaccacc acgttccagc ggtgggtgcg ctcgtcggcg aagatcacga
     8341 gcccgccctg gtgctgcccc atcgtgatgc tggcgtagcg taccttggcc gcgctctgga
     8401 tgatgccgag cgtgtcgcgc accatcgtga gctcgtggcg cagcgcgtcg cgctcagccc
     8461 ggagcgcacc ccgctcattg cgccatgcgc cggccaccag caccagcgat gcggccagcg
     8521 cggcggggag gagccaggcc cgggagggcc ggcgccgtcc gatcgcgcct tcgaccaggc
     8581 tccgggtgag accgggccgc ggcgtgacgg gtgtggcccc catcggcagc cacgccagct
     8641 cccgctcgag ccgctcgacc tcggcccggc attcggcgca gccgggcagg tgctcgtgga
     8701 agagccgttc ttcatccggc tccagggtcc gcgccaccag ggcgctccga tgttcgatga
     8761 accactcgtg tgccgtcata agacccagtc cctgatcgaa gccagtccag tccgcatctt
     8821 gtcgagcgcc agacgcaggc gcgttttcac cgtgccgagc ggaatgccga gccgcctggc
     8881 gatttcggag tgcgtgagcc cttcgaagta ggccaggcgg accacctgca gctggtcggc
     8941 cggcagtgcc tcgatcgcgg cgtgcacctg ctgatgcacc tgccaaccgg ggtgggcagc
     9001 ctcattgggc tccaccgccg gcagggcgtc gtgcccggcg gtttcggccc gcagccgctc
     9061 ggccttgagc cggcggcggc ggcgggcgcg gagccggtcg atggcgcggt tccgggttat
     9121 ccggagaagc cagggtacca gccggccgct ctcctgatcg aacagatcca cccgccgcca
     9181 cacgatcgca aaggcctcct gcaccacctc ttccgcctca tcgcgatcgg agagcatccc
     9241 ctgcgccagg ccaagcagcc agggggtcat gacctccacc agctcggcca gcgcggtctc
     9301 gtcgcgcgac aacagccgcc gctggagcga ggcctcccgc tccaggctca acatgcgccc
     9361 ctcggcgggg gcgcgaccgg tggctcgggg acgggaagcg gattcgttca tgggccgaag
     9421 tgcgggggat gaaagcacag ctcgtcacaa ggatcaacgc ctgccgccgc gtttcggttc
     9481 tccccggaac gaacacgggc cggacccgaa ggcccggccc gtgtcaccag cccgacgcgt
     9541 gggttacggg atgatcttta ccggcgccga gagggtgtgc tcatcggcca gcacatcgtg
     9601 gccgtagccc acctccaccg taccggtgct cccggccgcg ccctgtaccg tgacttcgtg
     9661 agaatagtga tgggcgctgt cgaccgccgc cgtggccagc gtgccggggt tgaaggtgag
     9721 cctggaccag tgttcgccct cgtgatcgtc caggttgtcg tcggcggcgg tgtagaacga
     9781 gccgcgtacg gtgacgttcc caccggcagg gaggaacagg gtatcggtgg tcatggtgtc
     9841 ggtgcccacg atcagcagca tccgcaccgg ggtgtgatcc tcggtcgcgg tggcttcatc
     9901 gctgttgcag gcgccaaccg ccagtagagc gcccagtccg atcaccgaga aggcaaagac
     9961 acgattcatt gctcgaaggt cctcgagtaa gaacggtttg tcagagagaa gctggtgaat
    10021 accggatcgc cgcccgcagc gtgcggggcg tgcccgggtt gagaaagccc gaggcgcgga
    10081 tttcgggata cctggtgtcg agcaggttct ggagctcgat gtcgagtacc gtgcggggcg
    10141 ccagacccac cgacgcaccc atgtccgcga ccatgtaggc cttggtgcgc actccatcct
    10201 cgccgatcgg cgtgaacggg ccgttgaacc ggaccgtcag ccgcggcgcg aactgctggc
    10261 tcacctggta ctccgcttcg acccgcccga gatagcgcga cacccccggg atatgagacc
    10321 ccggggtgag cggttcgacg tggttggcga ttggcgggat gggaaaaccg atcgccgagt
    10381 cgccgacgac gctggccacg agaaccgcgc ctccggtgcc gttcgatccg gtgattttcg
    10441 cgtcgttgaa ggtcccttcg gccgagaaac gcagccgcgg cgtgagctgt acgccaaggt
    10501 ggccggagaa tccccgccgc cggctggaac cggcatcgga gatctggagg gtgacgggat
    10561 ccaggatctt ctcgttccgg acatcggtct ggaacgcgga gacctggacc gagaccctgc
    10621 cagtggcgag ctcgatgccg acttccttgg cccacgcggt caccagcggc tggcgcacgt
    10681 cctcgatcac acccaccggc ccccggaagc cccggttgat cgacgccacc gcgctccacc
    10741 cgccaccgag gaggtaacgg gccccgaatt tcgggctcag caccgcgctg atgttgtcgc
    10801 ggaggcgcga atccgcctcc agccggtcct cgctggcgta gcggagaatg tcgccccgga
    10861 ccgagaggtc gtactgcagg cgcgaccacg ccagcccacg agtccggagg taggcgttcg
    10921 cctcctgata gcggccggtg gtgagttgcg tcgccagcag ccgttcccgc cggtcggtgt
    10981 ggtagagatc gtaggtgtcc cagtcggccc gcccgccaac cccggcccag gcttcgccgt
    11041 tggaggtagg cacccgccag taaccgctga agccgaccgc cgatcggctg tcccgctctt
    11101 cctgctgctc ggccgcgccg tcatccggca cggtgaggaa cacggtggag cggcccgcct
    11161 ggacccagcc cagcaggtcg atcgaactgc ccgaggccag ggtccgcgcg atccggccgt
    11221 gcagaattcc ccggccgctc cagccaccgt cggtgggatc ggcggcgcgc tggagatgac
    11281 cggcgttgta gtccgccacc gacaggaacc cgggcgagtc ccatcccgag ccgtagccgg
    11341 tgaacccccc ttcgagccgg gtgcgggcgt cgagccgctt ccagccacgg aactggaggt
    11401 tgccaagacc actggtgctg ttgtcccgcc agccctgacc ccgttcgccc tggatcgcaa
    11461 agaggtagcc cgagttctcg tgccgggcgc cgccgcggac ccatccggcg gcgtcgccgt
    11521 aattcgagcc gccgaccgag ccggcgagcc cggtggcatc ctgggcactg ttcacttcca
    11581 ccgcgccgcc cacggcgaag ttgccgtaga gcgggct
//
LOCUS       DATIFF010000403         1318 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_207903, whole genome shotgun sequence.
ACCESSION   DATIFF010000403 DATIFF010000000
VERSION     DATIFF010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1318
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207903"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..1271
                     /locus_tag="VLD58_06190"
     CDS             171..1271
                     /locus_tag="VLD58_06190"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase"
                     /protein_id="HSB53924.1"
                     /translation="MPSWTEFRGAKDPSLRVLDAEFGNAGPAPEILGDDLITPTTRFF
                     IRSHGDVPVVDPASWRLEVAGAVRTLLRLSLDDLRGQFPRQTVTATLVCAGLRRDELA
                     MVRPVVGELPWGLEPIGTAVWSGVPLREILQCAGVSPDARHVEGIGLDQISRRSARFG
                     FGGSIPLAKALEPEVLVALEMNGEPLPVLHGGPARLVVPGFIGARSVKWLGGITLRSD
                     PSENYFQAEAYRVLANPAPGDPRDVRRGVPLDWAPLNAAILCPEAEAVVPAGPVLVSG
                     WAFAGETRVRRVEVSGDDGRIWCEAALQGTSDPWAWVFWRVEVDLAPGRRLLAVRAWD
                     EAGRRQPEHLAEVWNVKGYVNNAWHRVPVEVR"
BASE COUNT          182 a          404 c          506 g          226 t
ORIGIN      
        1 ggtgccacgg gcgcggttcg acgagctggc gttggtgccg ggcgagagga tcttcgtgaa
       61 gccgaggaac gcccggctgt ttccaggctg acgccggtag tgcggggcgt tgccggggtg
      121 accgtggcgg gataatcttc cgcacctttt cgacctccgc aaagctggcc atgccatcgt
      181 ggactgagtt ccgtggcgcc aaggatccct cgctccgtgt cctcgacgcc gagttcggca
      241 acgccgggcc tgcgccggaa atcctgggcg atgacctgat cacaccgacg acccgattct
      301 tcatccgcag tcacggggac gtcccggtgg tggatcccgc gtcgtggcgc ctcgaggtgg
      361 ctggggcggt acgcaccctg cttcgcctgt cgttggacga ccttcgcggc cagtttcccc
      421 ggcaaacggt gaccgcaacg ctcgtctgcg cgggactgcg gcgggatgag ttggcgatgg
      481 tccggccggt cgtgggggag ttgccctggg ggctggagcc gatcgggacc gcggtatgga
      541 gcggtgtgcc tcttcgcgag atcctgcagt gtgccggagt atcgcccgac gccaggcacg
      601 tcgaggggat cgggctggac cagataagcc ggcgaagtgc ccggttcggg ttcggaggct
      661 cgatcccact ggccaaggcg ctcgagccgg aggtgctggt cgcactggag atgaacggcg
      721 agccgctccc ggtgctccat ggcgggccgg cgcggctggt ggtgccggga ttcatcggcg
      781 cccgcagcgt gaagtggctc ggaggcatca cgctccggtc cgatccgtcg gagaactatt
      841 tccaggccga ggcctaccgg gtgctggcca atcccgcgcc gggcgatccc cgcgatgtgc
      901 ggcgcggcgt gccccttgac tgggcgccgc tcaatgccgc gatcctttgt ccagaggcgg
      961 aggcggtagt accggctgga ccggtgctgg tgtcgggctg ggcgttcgcc ggagagacgc
     1021 gggtgaggcg ggtggaggtc tcgggtgatg acggccggat ctggtgcgag gcggccctcc
     1081 agggaacctc cgatccctgg gcgtgggtct tctggcgcgt ggaagtggac ctggcgccag
     1141 gacgtcgcct cctcgccgtt cgggcctggg acgaagccgg ccgccgtcag cctgagcacc
     1201 ttgctgaggt ctggaacgtg aaagggtacg tgaacaacgc atggcaccgg gtgccggtgg
     1261 aagtaagatg agccgccatg ggaccaggct cgcggcgagc ggacgcacgc cctgttcg
//
LOCUS       DATIFF010000404         1691 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1591262, whole genome shotgun sequence.
ACCESSION   DATIFF010000404 DATIFF010000000
VERSION     DATIFF010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1591262"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..566)
                     /locus_tag="VLD58_06195"
     CDS             complement(<1..566)
                     /locus_tag="VLD58_06195"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HSB53925.1"
                     /translation="MDDVQEDEGAGRWTRARRSADRRPWLGIVLVTVVVPILIGAAVI
                     LIGGRSLGFEIIRRLTVRKFPELRWVDRAELARWREDPGRTQPLVLDARTSPEYQVSR
                     LREAVWINPLRPSLHPVAKISRDAPIVVYSSVGYRGARVAHWLAEQGYRNVQNLEGGI
                     FQWANEGRPVFRDDRPTVEVHRYDQRWGL"
     gene            complement(601..1053)
                     /locus_tag="VLD58_06200"
     CDS             complement(601..1053)
                     /locus_tag="VLD58_06200"
                     /inference="COORDINATES: protein motif:HMM:NF021538.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2269 family protein"
                     /protein_id="HSB53926.1"
                     /translation="MDEVAVLRALHITGAVLLIGNVTVTGFWATFLYRSRATVPFRAV
                     ARAIMWADVVFTLVGGALLTITGIQLALARGYPMLATPWLRQGIGALALATLLWLVVL
                     LPDQWRLERLSPGDDRALRRVFLRWSVVGWAATLSLFYGLWAMVGKLH"
     gene            complement(1046..>1691)
                     /locus_tag="VLD58_06205"
     CDS             complement(1046..>1691)
                     /locus_tag="VLD58_06205"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HSB53927.1"
                     /translation="WDSAVPTLFLANHTNWWDGFLACLVTGRLGLRFQVLMEARHLAR
                     YRLFLKVGALPVRRGQPRAAYADLAAAAWYLRPGTGLWIFPQGTRRPPQERPIGCERG
                     AAHLALRFGRPLRVCPVALRYVFVGEQLPEAFVLLGQDWLLSPGAFASREDLMREMES
                     RLADTVDALDVLVGAESLGAFQPLAHGRLSVNKRLDRLRHAVGLLRGPFEARNG"
BASE COUNT          296 a          624 c          565 g          206 t
ORIGIN      
        1 aggccccacc gctggtcgta ccggtgaact tcgacggtcg ggcggtcgtc ccggaagacg
       61 ggccggccct cgttggccca ctggaagatc cccccctcca gattctgcac gttccgatat
      121 ccctgctccg ccagccagtg cgccacgcgt gcgccccgat agccaaccga gctgtagacc
      181 acgatgggcg catccctgga aatcttcgcg acggggtgca ggctgggacg cagcggattg
      241 atccacaccg cctcccgcag gcggctcacc tggtattccg gcgacgtgcg cgcgtcgagc
      301 acgaggggct gcgtccggcc gggatcctcc cgccagcgag ccagctcggc gcggtccacc
      361 caccgcagct cgggaaactt gcgaacggtg agtcggcgga tgatctcgaa gccgagcgag
      421 cggccgccga tcaggatgac ggccgccccg atcagaatgg ggaccacgac ggtgacgagc
      481 acgatgccca gccacggccg ccggtccgcc gaccggcgcg ccctcgtcca gcgcccggcg
      541 ccttcgtctt cctggacgtc gtccatggcg actccgtgtg aggctccctc taatctggcc
      601 tcagtgaagc ttcccgacca tggcccagag cccgtagaac aggctcagcg tcgcggccca
      661 cccgaccacg ctccagcgaa ggaacacccg tcgaagcgcc cggtcgtcgc cgggggagag
      721 gcgctccagc cgccactgat cggggaggag gactaccagc cagagcaggg tggccagcgc
      781 cagcgcaccg atgccctgcc gcagccaggg cgtcgccaac atcgggtagc cccgggccag
      841 cgcgagctgg atgccggtga tcgtgagcag cgctccgccg accagcgtga agaccacgtc
      901 cgcccacatg atggcgcggg ccacggcgcg aaacggcacg gtcgcgcggc tgcgatacag
      961 gaacgtggcc cagaagccgg tcacggtgac gttcccgatc aggagcacgg ccccggtgat
     1021 gtgcagggca cgcaacacgg caacttcatc cattccgagc ctcgaacgga ccgcgcagca
     1081 atccgacggc atgacggagc cgatcgaggc gcttgttgac cgagagtctt ccgtgcgcca
     1141 acggctgaaa cgccccgagc gactccgcgc cgaccagcac gtcgagcgcg tccaccgtgt
     1201 cggccagacg gctctccatc tcgcgcatga ggtcctcgcg ggaggcgaat gcccccgggg
     1261 agagcagcca gtcctggccc aggagcacga acgcctcggg aagctgctcg cccacgaaca
     1321 cataccggag cgccacggga cagacccgga gcgggcgccc gaaccgcagc gccaggtggg
     1381 ccgctccacg ctcgcagccg atcggccgct cctgcggagg ccgccgggtg ccctgcggga
     1441 agatccatag cccggtgccg ggccggagat accaggccgc tgccgccagg tcggcgtacg
     1501 ccgccctcgg ctgcccgcgc cgcacgggca atgcccccac cttgaggaac aaccggtacc
     1561 gcgcgaggtg ccgcgcctcc atcagcacct ggaaccggag gcccaggcgt ccggtcacca
     1621 ggcaggcgag gaagccgtcc caccagttgg tgtggttagc caggaagagc gtcggtaccg
     1681 ccgaatccca g
//
LOCUS       DATIFF010000405         5195 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2054179, whole genome shotgun sequence.
ACCESSION   DATIFF010000405 DATIFF010000000
VERSION     DATIFF010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5195
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2054179"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..756
                     /locus_tag="VLD58_06210"
     CDS             <1..756
                     /locus_tag="VLD58_06210"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53928.1"
                     /translation="GLAGSGAGIITGLLCTRLRINASLAGVLVSTGFYSITLVILGGG
                     TLSLADASSVMTGAGKLGQMLGLPALFDLMGTTVTAEGVVTVFVMAALALFLTVALIV
                     FLRTNLGLAVRASGGNPNMARALGVNVDHMLILGLGLANGLVGISGALEAQFLGYANV
                     QMGVGAVVTGLATLLIGEALMGKRPLWRWVGSALVGAVVYRSLVAAAVRAGLNANALR
                     LLTALMVLVVLLLPRLKRFLPRKKAGEEAAEYA"
     gene            749..1573
                     /locus_tag="VLD58_06215"
     CDS             749..1573
                     /locus_tag="VLD58_06215"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSB53929.1"
                     /translation="MPETALRLGGLVQLFHAGTGNEVRALDGVDLELARGTFTVVLGS
                     NGSGKSTLLSAVAGSQKLTAGRVELDGRDISRWPEQRRAGLIGRVFQNPFMGTAPDLT
                     VAENLMLASLRGRRHGLGRALKAEKRKMVRDRVAKLGMGLEDRMETPIGWLSGGQRQA
                     LTVLMATMVKPSLLLLDEHTAALDPRSAEQVLKLTNDVIVADNLTTLMVTHSMTQAVA
                     LAERILVMHRGRIVSDMSTEGGRLIKEDDLLQVFDELRWSDRLDAGAAEMLRHNYV"
     gene            complement(1553..4462)
                     /locus_tag="VLD58_06220"
     CDS             complement(1553..4462)
                     /locus_tag="VLD58_06220"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HSB53930.1"
                     /translation="MIRVNVLGGLSVVSERHPAGVVIQPRRLAVLAILAVAGERGVTR
                     EQILTLLWPDNDEERGRHALTQALYALRKDLGAEDLFLGQQELRLNPDLTSSDWDDFH
                     RAIRAGRPERAIELYGGPFLDRFHPGKSDNFDRWSEDHRSRVEQGLGQALETAAIRAT
                     ERKDLPAAIAFLRRRSEQDPLDPKVAVKLIEALAAHGDVVNALQYARSYEARVKAELD
                     LPVDAAVLALTNRLRAAARMPAEEPPTAAGAHLADIPGQEAREVHTGPPPASVSRRWR
                     LATVSLLVIISVLLAASYFRPARQTLADTARPVLAVGIISDYGAREGAGLGLALGDML
                     ATNLSRGTGFRVVSTGRMLELTRQIRDHGDSADVVGRAARQAGAAQLIDGSLYTLAPG
                     SYRLDLRRVDLATGAVIRSYKVEGADLFALVDSGTAGLIPDLGGELPAGSVALASTRS
                     LAAYQAYEEGLRKYYDDDLAGAEIHFRRALDFDSNFAQAAFAYARANTSASRTSTFDR
                     MKRALVLSRRANDRDRLVIQAEWAASNLSKSLVPIADTLVIRYPEEIEGYYYAGIGAV
                     MEARYADAERHFLRVLSLDSLELPDRKSGQRCWLCEAYIGLSNVYFSTDSVDKMRRFI
                     RQWVRRQPSNPQPWRGLASVYVAEHQMGPALTALRIADSLDPSNPFNWRFLVSVRAAA
                     DDYPEAVRLLRAEVETAPVYFRPQARWDLAVCLRQMGRLDEALQMARQFRSEVQERAL
                     PGAAPYNALLEGQVLFELGRYRESAALFDSIAMGQDSTLDPALQAKDRVWAWVHEADA
                     LAQLGDTARLRFLADSMEVLGGIVAQARDVHLHQHVRGLLARLEGRPDEAMEWFRRAI
                     VSPVAGFTRSNHELGQLYLKAGRPKAAIGIVRPASHGGTVGSNLYITRTELLLQLARA
                     FEQAGASDSAKYYYQTTARIWNQADARFRPRLDSIEVALARLERQGDATSHVIVP"
     gene            complement(4459..>5195)
                     /locus_tag="VLD58_06225"
     CDS             complement(4459..>5195)
                     /locus_tag="VLD58_06225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53931.1"
                     /translation="EALSLAHEHRLRPHEELLPGAAPYDALLEGQVLFELGRYREAAA
                     LFDSIAVGSRMVIDSSLRYGSRIWAFTHSADAYAELGDSARVRLLADSMQVLGEQVAL
                     ARDQRLYAYARGLYARLAGKDDEAVSWFERSLTSVTVGFTRANYQLGALYLKSGQALK
                     AVRILRAGYRGGTVGSTLYVTRTDMEARLAQAFEAAKQKDSALVYYRRVLANWSRADE
                     QFRPRRDSIAAAVARLTGVSQAASAK"
BASE COUNT          803 a         1757 c         1837 g          798 t
ORIGIN      
        1 ggcctggccg gctcgggtgc cgggatcatc accggcctcc tctgcacccg gctccgcatc
       61 aacgcctcgc tcgccggagt gctggtgagc accggtttct actcgatcac cctggtaatc
      121 ctgggcggcg gcacgttgtc gctggccgat gcttcgagcg tgatgacggg ggcgggcaag
      181 ctgggccaga tgcttggtct ccccgcactg ttcgatctga tgggcacgac ggtgacggcg
      241 gaaggggtcg tcacggtgtt cgtcatggcg gcgctggcgc tgtttctcac agtcgccctg
      301 atcgtcttcc tgcgcaccaa tctcgggctc gcggttcggg ccagcggggg caaccccaac
      361 atggcgcgcg cccttggggt gaacgtcgac cacatgctca tcctgggact cgggctcgcc
      421 aacgggctgg tgggtatctc cggcgcgctc gaggcgcagt tcctcggcta cgccaacgtg
      481 cagatggggg tgggcgcggt ggtgacgggc ctcgcgaccc tcctgatcgg cgaggcgctg
      541 atggggaagc ggccgctctg gcgctgggta gggtccgccc tggtgggcgc ggtggtctac
      601 cgctcgctgg tcgcggcggc ggtgcgcgcg gggctcaacg ccaacgccct ccgcctgctg
      661 accgcgttga tggtgctggt ggtgctgctg ctcccgcggc tcaagcgctt cctcccccgg
      721 aagaaggcgg gagaggaggc ggccgagtat gcctgagacc gcgctccggc ttggcggact
      781 ggtccagctc tttcacgccg gcaccggcaa cgaggtgcgg gcgctcgacg gcgtcgacct
      841 cgagctggcg cgagggacct tcaccgtggt gctcggcagc aacggctcgg gcaagtccac
      901 cctgttgagc gccgtggcgg ggagccagaa gctcaccgcc ggccgggtcg agctcgacgg
      961 gcgtgacatc tcccgctggc ctgaacagcg ccgggcggga cttatcggcc gggtattcca
     1021 gaaccccttc atgggcacgg cgcccgacct caccgtggcc gagaacctga tgctcgcgtc
     1081 cctccgcggg aggcggcacg ggctgggccg ggcactcaag gccgagaagc ggaagatggt
     1141 gcgggacagg gtcgcgaagc tggggatggg actcgaggac cggatggaaa caccgatcgg
     1201 gtggctttcg ggcgggcagc gtcaggcgct cacggtgctg atggcgacga tggtgaagcc
     1261 ttcgctgctg ctgctcgatg agcataccgc ggccctcgat ccccgcagcg cggagcaggt
     1321 gctcaaactc accaacgacg tgatcgtggc cgacaacctc accaccctca tggtgaccca
     1381 ctccatgacc caggcggtgg cactggcgga gcggatcctg gtgatgcacc gtgggcggat
     1441 cgtgagtgac atgtcgaccg aggggggccg gctgatcaag gaggacgatc tgctgcaggt
     1501 gttcgacgag ctgcggtggt cggaccggct cgacgccggc gcggcggaga tgctacggca
     1561 caattacgtg tgaggttgcg tcgccctggc gctccagccg cgccagcgcc acctcgatcg
     1621 agtccagccg aggccggaaa cgggcatcgg cctggttcca gatccgggcc gtggtctggt
     1681 agtagtactt cgcgctgtcg gatgctcccg cctgctcgaa cgcccgcgcc agctgcagca
     1741 agagctccgt ccgcgtgata tagagattgg agccgacggt cccgccgtgg ctcgccggac
     1801 ggacgatgcc gatcgcggcc tttggcctcc ccgccttgag gtagagctgt cccaactcgt
     1861 gattgctgcg ggtgaagccg gcgaccgggc tcacgatggc gcggcggaac cactccatgg
     1921 cctcgtccgg ccgcccctcg agccgggcga gcagcccccg cacatgctgg tgcaggtgca
     1981 cgtcgcgcgc ctgggccacg attcccccca gcacctccat gctgtcggcc aggaagcgaa
     2041 gccgggcggt gtcgcccagc tgggcgagtg cgtccgcctc gtggacccag gcccataccc
     2101 ggtccttggc ctggagcgca gggtcgagag tggagtcctg ccccatggcg atcgagtcga
     2161 agagcgccgc cgattcgcgg tagcggccca gctcgaagag cacctgcccc tcgaggagcg
     2221 cgttgtaagg cgccgcgccg ggaagggccc gttcctgtac ctcgctccgg aactgccggg
     2281 ccatctggag cgcctcgtcg aggcggccca tctgccggag acagaccgcg agatcccacc
     2341 gggcctgggg gcggaagtag accggtgcgg tctccacctc cgcccgcagc agccgcaccg
     2401 cttcgggata gtcgtcggcc gcggcacgca cgctcaccag gaagcgccag ttgaacgggt
     2461 tgctgggatc gagggagtcg gcgatgcgga gcgcggtgag cgccggcccc atctggtgct
     2521 cggcgacgta gaccgaggcc agtccccgcc agggctgggg attcgacggc tggcggcgga
     2581 cccactggcg gatgaaccgc cgcatcttgt cgaccgagtc ggtcgagaag tacacgttgc
     2641 tgagcccgat atacgcctcg cagagccagc agcgctgtcc actcttccga tccggcagct
     2701 ccagcgagtc gagcgacagc acccgcagga agtgccgttc cgcatcggca tagcgggcct
     2761 ccatgaccgc gccgatcccg gcgtagtagt agccctcgat ttcttccgga tagcggatga
     2821 ccaaggtgtc ggcaatcggc accaggctct tcgacaggtt gctggcggcc cactcggcct
     2881 gaatgacgag ccggtcgcgg tcgttggccc ggcgcgagag caccagtgcc cgcttcatcc
     2941 ggtcgaacgt cgaggtccgc gaggccgagg tgttcgcgcg ggcgtacgcg aaggctgcct
     3001 gggcgaagtt ggagtcgaaa tcgagcgccc ggcggaagtg gatctcggcg ccggcgaggt
     3061 catcgtcgta atacttccgg agtccctcct cgtaggcctg gtacgcggcg agcgagcggg
     3121 tcgaggccag cgccaccgac ccggccggca attcgccccc aagatcaggg atcaacccgg
     3181 cggtcccgct gtccaccagg gcaaagagat cggcgccctc caccttgtag gaccggatca
     3241 cggcgccggt cgcgaggtcc acccgacgga gatccagccg atagctgccg ggcgccaggg
     3301 tgtagaggga accgtcgatc agctgggccg ccccggcctg gcgggctgcg cgtcccacta
     3361 cgtctgccga atcaccatga tccctgatct gccgggtcag ctccagcatc cggccggtgc
     3421 tgacgacccg gaagccggtg ccgcgcgaga gattggtcgc cagcatgtca cccagcgcca
     3481 gccccagacc tgccccttcc cgggcaccgt agtccgagat gatgccgacc gcgagcaccg
     3541 gtctggcggt atcggccagg gtctgacggg cggggcggaa gtatgatgcg gcaagcagca
     3601 ccgaaatgat cacgagcagg ctgacggtcg cgagcctcca gcgccgcgac accgaggccg
     3661 gaggcggccc ggtatgcacc tcacgagctt cctgcccggg gatgtcggcc aggtgggcac
     3721 cggcagccgt cggcggctcc tccgccggca tccgcgccgc ggcccggagc cggtttgtca
     3781 gcgccagaac agcggcatcg accgggagat cgagttctgc cttcacccgc gcctcgtagg
     3841 agcgggcgta ctggagcgcg ttcaccacat cgccgtgggc cgctaatgct tcaatcagct
     3901 tgacggccac cttggggtcg agcgggtcct gctcactgcg gcggcgcagg aaggcgatcg
     3961 cggccggcag gtccttgcgc tcggtcgcgc ggatggcggc agtttccagc gcctgtccca
     4021 gcccctgctc gacccggctc cggtggtcct ccgaccagcg gtcgaagttg tcggacttcc
     4081 ccgggtgaaa tcggtcgagg aagggtccgc catagagctc gatcgcccgt tcggggcggc
     4141 ccgcccgaat ggcacgatgg aaatcatccc agtctgagct ggtgagatcc gggttgagcc
     4201 gcagctcctg ctggccgagg aagagatcct cggcgccgag atccttgcgg agggcataca
     4261 acgcctgagt gagcgcgtgg cggccgcgct cttcgtcgtt gtccggccag agcagtgtca
     4321 ggatctgctc gcgggtcacg ccccgctctc cggccaccgc gaggatcgcc agcacggcca
     4381 gccgacgagg ctggatcaca acccccgccg gatgccgctc cgacaccacg gacagcccac
     4441 ccaacacgtt gacgcggatc atttcgccga cgcggcctgg gagacaccgg tcagccgcgc
     4501 gaccgccgcc gcgatcgaat cgcgccgggg ccgaaactgt tcgtcggccc ggctccagtt
     4561 ggccaggacc cttcggtagt agaccagggc gctgtccttc tgcttcgccg cctcgaaggc
     4621 ctgggcaagc cgcgcttcca tgtcggtgcg ggtgacatag agcgtggagc cgacggtgcc
     4681 accccgatac ccggcccgca ggatgcggac ggccttgagc gcctggcctg atttgaggta
     4741 cagcgctccc agctggtagt tagcccgggt gaaaccgacg gtcacgctgg tcaacgaccg
     4801 ttcgaaccag ctgaccgctt cgtcatcctt tccggcgagc cgggcgtaca gcccgcgggc
     4861 ataggcgtac agacgctggt cacgggccag ggccacctgc tcgcccagga cctgcatcga
     4921 gtccgccagg aggcggaccc gggcggaatc gccgagctcg gcatacgcgt cggcggaatg
     4981 ggtgaaagcc cagatgcggc tgccgtagcg gagcgaggaa tcgatcacca tgcgggatcc
     5041 gaccgcgatc gagtcgaaca gtgcggcggc ttcgcggtac cggcccagct cgaacagcac
     5101 ctgaccctcg agcagggcgt cgtagggcgc ggcgcccggc aggagctcct cgtgcggccg
     5161 gaggcggtgc tcgtgcgcca gcgacaaggc ctccc
//
LOCUS       DATIFF010000406         2372 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_208244, whole genome shotgun sequence.
ACCESSION   DATIFF010000406 DATIFF010000000
VERSION     DATIFF010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2372
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_208244"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1547)
                     /locus_tag="VLD58_06230"
     CDS             complement(<1..1547)
                     /locus_tag="VLD58_06230"
                     /inference="COORDINATES: protein motif:HMM:NF013106.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HSB53932.1"
                     /translation="MGRFAILKPQLSWETVLTRRGVAGGVALFVMLGAGFSWGAWSRV
                     CAAERCPTIARLMGSNSVPQQTSKVYAADGRLITELGLERRTVLPLGEIPPWVREAFL
                     ATEDKRFYSHNGIDYWRIPGAFWANLSTLSYTQGFSTITMQLARNIFPEQISREKQLT
                     RKLKEARVAIEIEHNFPKDTILQMYLNQIDLGAGAHGVEAAAQVYFGKSARDLNVAEA
                     ATLAAIPKAPSFYNPRLHPDRAVRRRNVVLALMQSQGFLSADEAELWKAYPLVLTTSR
                     TNYGDVAPYFVEWLRTQYLEPRYGRDLYEKGLRIYTTLDLDMQEAAERALSAQLDAIE
                     AGVYTGGKWDRPTYREYLESSKAGQGEDHGPATQYLQGALLAMDTRTGYIRAMIGGRD
                     FADSKFNRVTQAKRAPGSTFKPFVYSAAVRAGHPVTEILQDSPLDQPVLQPDSTYWNP
                     QDYDLTTKGPIPMRQSLFLSRNLSTIKLGMALGEQTVIGEARRYGITTPIPPVPAIHI
                     GAKEVYP"
     gene            1616..>2372
                     /gene="tyrS"
                     /locus_tag="VLD58_06235"
     CDS             1616..>2372
                     /gene="tyrS"
                     /locus_tag="VLD58_06235"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HSB53933.1"
                     /translation="MSDLLAELRWRGLLHEATPGLDAHLARGPLTAYCGFDPTARSLQ
                     LGNLVPLMLLHHLQRAGHRPIVLMGGGTGLIGDPSGKRTERPLLPPEELRANLEAQRA
                     QMAQFLDFRDDRALLVDNADWLVPERLVDFLRTVGKHFTINIMLQKESVKARLESGLS
                     FTEFSYMLLQAYDYLELFRRHRCTLQVGGSDQWGNITAGVDLVRRTEGAEVHGLVAPL
                     ITMASGAKFGKSESGAIYLDAALTSPYKFHQFWV"
BASE COUNT          358 a          828 c          796 g          390 t
ORIGIN      
        1 atcgggtaca cctccttcgc cccgatgtgg atcgccggga ccgggggaat cggggtggtg
       61 atgccgtagc gccgggcctc gccgatgacc gtctgctcgc ccagggccat ccccagcttg
      121 atcgtcgaca ggttgcgcga caggaagagc gactgacgca tgggaatcgg acccttggtc
      181 gtcagatcgt agtcctgggg attccaatac gtgctgtcgg gctgcagcac cggctgatcg
      241 agcggtgagt cctggaggat ctcggtcacc gggtgccccg cgcgcacagc cgccgagtag
      301 acgaagggct tgaacgtcga gcccggcgcc cgcttcgcct gggtgacccg gttgaacttc
      361 gagtcggcga agtcgcgccc gccgatcatg gcccggatgt atccggtgcg ggtgtccatc
      421 gcgaggagcg cgccctgcag gtactgcgtc gccggcccgt ggtcttctcc ctgcccggcc
      481 ttggacgatt cgaggtactc gcggtaggtc gggcggtccc actttccacc ggtgtacacc
      541 cccgcctcga tggcgtcgag ctgcgccgac agcgcccgct cggccgcctc ctgcatgtcc
      601 agatcgaggg tggtgtagat ccgcagcccc ttctcgtaga ggtctcggcc gtagcgcggc
      661 tcgagatact gcgtccgcag ccattcgacg aagtacggcg ccacatcgcc gtagttggtg
      721 cggctggtgg tgagcaccag cgggtaggcc ttccacagct ccgcctcgtc ggccgacagg
      781 aagccctgcg actgcatcag cgccagcacg acgttgcggc gccgcaccgc gcggtccggg
      841 tgcaggcgcg gattgtagaa ggagggcgcc ttgggaatcg cggcgagcgt cgccgcctcc
      901 gcgacgttca ggtcgcgcgc cgacttgccg aagtacacct gcgccgcggc ttccaccccg
      961 tgcgcccccg cccccagatc gatctggttc agatacatct ggaggatcgt gtccttgggg
     1021 aagttgtgct cgatctcgat cgcgacccgc gcttccttga gcttgcgggt cagctgcttc
     1081 tcgcgactga tctgctccgg gaagatgttg cgggcgagct gcatcgtgat cgtggagaac
     1141 ccctgcgtgt agctgagcgt gctgaggttc gcccagaacg cacccgggat gcgccagtag
     1201 tcgatgccgt tgtggctgta gaaccgcttg tcctcggtgg cgaggaacgc ctcgcgcacc
     1261 cagggtggga tctcgcccag cggcaacacg gtgcgccgct cgagaccgag ctcggtgatc
     1321 aggcggccgt cggccgcgta caccttggaa gtctgctggg gaaccgagtt ggagcccatc
     1381 agccgggcga tcgtggggca gcgctcggcg gcgcacaccc gcgaccaggc gccccaggag
     1441 aatccggcgc ccaacatgac gaagagcgcc acacctccgg ccactccccg gcgggtgagc
     1501 acggtctccc acgacagctg cggcttgaga atggcgaacc gacccatcgc gctacaacct
     1561 agcggcacgc cccggcgctt gccagcgccc gcggccgctc ttacgattcg cgcccatgtc
     1621 ggacctgctc gcggagctcc ggtggcgcgg cctgttgcac gaggcgacgc ccggcctcga
     1681 cgcgcacctg gcgcgcgggc cgctcaccgc ctactgcggc ttcgacccga ccgcccgcag
     1741 cctgcagctg ggcaacctgg tcccgctgat gctgctgcac cacctgcagc gggccggcca
     1801 ccggcccatc gtgctgatgg gcggcggcac cggactgatc ggcgacccct ccggcaagcg
     1861 gacggagcgc cccctgctcc ccccggagga gctgcgcgcg aacctcgagg cgcagcgcgc
     1921 ccagatggcg cagttcctcg acttccgcga cgaccgcgcc ctcctggtcg acaacgcgga
     1981 ttggctcgtg ccggagcggt tggtcgactt cctgcgcacc gtcgggaagc acttcaccat
     2041 caacatcatg ctccagaagg aatcggtgaa ggccaggctc gagagcggtc tgtcgttcac
     2101 cgagttcagc tacatgctgc tccaggccta cgactacctg gagctgttcc gccgccaccg
     2161 ctgcaccctg caggtgggcg gctcggacca gtggggcaac atcacggcgg gcgtcgacct
     2221 ggtgcggcgc accgaaggcg ccgaggtcca cggactcgtc gccccgctca tcactatggc
     2281 ttccggggcc aagttcggga aatccgagtc gggcgcgatc tacctggacg cggcgctgac
     2341 ctcgccctac aagttccacc agttctgggt ga
//
LOCUS       DATIFF010000407         1697 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1284749, whole genome shotgun sequence.
ACCESSION   DATIFF010000407 DATIFF010000000
VERSION     DATIFF010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1697)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1697)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1697
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1284749"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1432)
                     /gene="carB"
                     /locus_tag="VLD58_06240"
     CDS             complement(<1..1432)
                     /gene="carB"
                     /locus_tag="VLD58_06240"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HSB53934.1"
                     /translation="MPKRTDLHSILLLGSGPIVIGQGAEFDYSGTQAVRALKEEGYRV
                     ILVNSNPATIMTDPEMADRTYLEPVTPEWVARVIERERPDALLPTMGGQTALNVAMAL
                     AKDGSLARYGVELIGASERAIRVAEDREEFSRAMARIGLATPRGRTVRSLEEGLDAVE
                     EVGYPAIIRPSYTLGGTGGGIAYNREEFVEIAGRGLDLSPVGSVLVERSVIGWKEFEL
                     EVMRDGADNVVIVCSIENLDPMGVHTGDSITVAPAMTLTDREYQVMRDASIKIIREVG
                     VAAGGCNIQFAVSPTTGEQLVIEMNPRVSRSSALASKATGFPIARIGAKVAVGFRLDE
                     LPNDITKTTPASFEPVLDYVVVKVPRFAFEKFPTADPRLGTQMKAVGEAMAIGRTFKE
                     AFQKGFRALEADRSGWEVGRTPADDRLTDTSLEATRAAIRTPTAERIFQVKRALQLGV
                     TVEEAAERTGIDPWFLGQMQELIESER"
     gene            complement(1416..>1697)
                     /locus_tag="VLD58_06245"
     CDS             complement(1416..>1697)
                     /locus_tag="VLD58_06245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53935.1"
                     /translation="AVARAYVALLAHGRVGEVYNIASGEGRSLAAIFGRLAELIGVRA
                     IPEPDPQLARSADLPHLVGDAARLRAVTGWAPRISFDQTLQDVVNAQTD"
BASE COUNT          241 a          601 c          585 g          270 t
ORIGIN      
        1 cccgctcgga ctcgatcagc tcctgcatct ggcccaggaa ccaggggtcg attccggtcc
       61 gctcggccgc ctcctccacg gtgacgccga gttgcagggc gcgcttgacc tggaagatcc
      121 gttcggcggt gggcgtgcgg atggcggccc gggttgcctc gagcgaggtg tcggtgagcc
      181 ggtcgtcggc cggcgtccgg cccacctccc agccggagcg gtcagcctcc agtgcgcgga
      241 accccttctg gaaggcttcc ttgaaggtgc ggccgatcgc catggcttcg ccgacggcct
      301 tcatctgggt cccgagcctc gggtcggcgg tggggaactt ctcgaaggcg aagcgcggca
      361 ctttcaccac cacatagtcc agcaccggct cgaacgaggc cggggtggtc ttggtgatgt
      421 cgttgggcag ctcgtccagc cggaagccga cggccacctt ggccccgatc cgggcgatgg
      481 ggaagccggt ggccttggag gccagggcgg aggagcgcga gacccgcggg ttcatctcga
      541 tgaccagctg ctcgcccgtg gtggggctca ccgcgaactg gatgttgcag ccgccggcag
      601 cgacgcccac ctcgcggatg atcttgatgg aggcgtcccg catgacctga tattcgcggt
      661 cggtgagcgt catcgccggc gccacggtaa tggagtcccc ggtgtgcacc cccatcgggt
      721 ccaggttctc gatggagcag acgatgacca cgttgtccgc gccgtcgcgc atcacttcga
      781 gctcgaattc cttccacccg atgacgctcc gctcgacgag gaccgatccc accggggaga
      841 ggtccagtcc gcggccggca atctcgacga actcctcccg attgtaggcg atgccgccgc
      901 cggtgccgcc cagggtatac gacggccgga tgatcgccgg gtagccgacc tcctccaccg
      961 catccagccc ttcctccagg ctccgcactg tccggccgcg tggagtggcc agcccgatcc
     1021 tggccatggc gcggctgaat tcctcccggt cctccgccac ccgaatggcc cgctcgctgg
     1081 caccgatcag ctcgaccccg taccgcgcca ggctcccgtc cttcgcgagc gccatcgcca
     1141 cgttgagcgc ggtctggcca cccatcgtgg ggaggagggc gtcggggcgc tcgcgctcga
     1201 tcacccgggc aacccactcc ggcgtcaccg gctcgaggta ggtccggtcc gccatctccg
     1261 ggtcggtcat gatggtggcg gggttggagt tcaccaggat gacccggtac ccctcctcct
     1321 tgagggcgcg caccgcctgc gtgcccgaat agtcgaactc cgccccctgg ccgattacga
     1381 tcgggccgga gccgagcagg aggatggagt gcaggtcagt ccgtttgggc attgacgacg
     1441 tcctggagcg tctggtcgaa tgagatcctg ggggcccagc cggtgacggc gcggagccgg
     1501 gccgcgtcgc ccacgaggtg cggcaggtcc gcgctgcggg ccagctgcgg atcgggctcc
     1561 gggatcgccc gcacgccgat caactcggcc agccgcccga agatcgccgc gagcgaacga
     1621 ccctcgccgg aggcgatgtt gtacacctcg cccacccggc cgtgggcgag cagcgcgacg
     1681 taggcgcgcg ccacggc
//
LOCUS       DATIFF010000408         1823 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_515559, whole genome shotgun sequence.
ACCESSION   DATIFF010000408 DATIFF010000000
VERSION     DATIFF010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1823
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_515559"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..618
                     /locus_tag="VLD58_06250"
     CDS             <1..618
                     /locus_tag="VLD58_06250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53936.1"
                     /translation="LADLLVVEFRDLADDTGTYHSASAFKIGDHIIPVHFLTSKHWVL
                     KWDDSLHDETAMAAHLAYVRDNPHEAWLRRVFELAQVGYGRIDYGICGDTLRLWEINL
                     NPTFSRGPGPEPPPFAPAVEAILEESRVIFHGGLKAALRSLDPGVERSQVAVRLDPAL
                     VARLRADSARGRRRQSVLQLLHRLYRHPRLGWLFRMAYHRLVPRQ"
     gene            complement(728..946)
                     /locus_tag="VLD58_06255"
     CDS             complement(728..946)
                     /locus_tag="VLD58_06255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HSB53937.1"
                     /translation="MRTTGTVKWFNDAKGFGFITPSDGAKDCFVHHSAITGEGFKSLA
                     EGEKVEFTVVQGAKGPAAENVTRAAAGA"
     gene            1287..>1823
                     /locus_tag="VLD58_06260"
     CDS             1287..>1823
                     /locus_tag="VLD58_06260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB53938.1"
                     /translation="MITLARIPLEGHGVRLEPLTRDHEAGLAAAAADGRLWELWFTSV
                     PAPDQTGQYVADALEGERAGHMLPWAVRELGTGEIIGSTRYHDIVPRIDRVEIGYTWY
                     AARWQRSRVNTACKLMLLTHAFESLGCRVVGLRTDNFNFASQRAILGIGAKFDGAIRR
                     HQARRDGTVRDSMMYSILA"
BASE COUNT          287 a          651 c          599 g          286 t
ORIGIN      
        1 ctcgccgatc tcctcgtggt cgaattccgc gatctggccg acgacaccgg gacctatcac
       61 agcgcgtccg ccttcaaaat cggggaccac atcatcccgg tccacttcct gacctcgaag
      121 cactgggtcc tcaagtggga cgacagcctc cacgacgaga cggcgatggc cgcgcacctc
      181 gcgtacgtca gggacaaccc gcacgaggcg tggctccgcc gggtcttcga gctcgcgcag
      241 gtcggctacg gccgcatcga ctacggcatc tgcggagaca cgttgcgcct ctgggaaatc
      301 aacctcaatc cgaccttctc ccggggcccg ggcccggaac ccccgccctt cgcaccggca
      361 gtggaggcga tactggagga gagtcgcgtc atcttccatg gcgggctcaa ggccgccttg
      421 cgttccctcg accctggcgt ggagcgcagc caggtggcgg tgcggctcga tccggccctc
      481 gtcgcgcggc ttcgggccga ttcggcgcgc gggcggcggc gtcagtcggt gctccagctg
      541 ctgcaccggc tctaccgaca tccccgcctg ggctggctct tccgcatggc ctaccatcgg
      601 ctcgtgcctc ggcagtgatc cccggccccg cgtatccccc gcgcggggcg gaccacgggc
      661 cggaagcgaa acagccagcc cgaccgaagt cgggctggct gtcgttcgta cggtgaaccg
      721 gtgcgggtta cgcgccggcg gccgcccggg tgacgttctc cgcggccggg cccttggcgc
      781 cctgcacgac ggtgaattcg accttctcac cctcggccag ggacttgaat ccctcgccgg
      841 tgatcgccga atgatggacg aagcaatcct tcgccccatc cgagggggtg atgaagccga
      901 agcccttggc gtcgttgaac cacttcaccg tgccggtggt acgcattgtc ctgctccttg
      961 ttcctgggtc ggcccgcacc attgcgggcg gtgccgacgc gctgtccccg tgacaaaccc
     1021 tcacgggagg gaccttcccg cagcccgggg agcttccccg tcgctgccag cgacgatcag
     1081 gatgaaaaga ggggccacag cagcgccggg cccctcgtgt caactcggaa ataatccgtg
     1141 aactgaacga ccgctgatgc aacatagcgg catggggccc aaagcaccac cccgaggttc
     1201 gggccggtcc ctggaaatga tatcttggtg cacgcgggga tcggtctccc cgcgccaagg
     1261 ccaccgattc cgacccgggg aatccagtga tcacgctcgc acgcatccct ctcgaaggcc
     1321 acggcgtccg cctggagccg ctcacccgcg atcacgaagc cgggctcgcc gccgcggcgg
     1381 ccgacggccg gctctgggag ctctggttca cgtcggtgcc ggcgccggac cagacgggcc
     1441 agtacgtcgc cgacgcgctc gagggggagc gggccggcca catgctcccg tgggcggtcc
     1501 gggagcttgg cacgggcgag atcatcggca gcacccggta tcacgacatc gtgccccgga
     1561 tcgaccgggt ggagatcggc tacacctggt acgccgcgcg atggcagcgg agccgcgtga
     1621 acaccgcctg caagctgatg cttctcaccc atgcgtttga atcgctggga tgccgggtgg
     1681 tggggcttcg gaccgacaac ttcaacttcg cctcgcagcg cgccatcctc ggcatcggcg
     1741 cgaagttcga cggcgcgatc cggcggcacc aggcccggcg ggacgggacg gtccgcgaca
     1801 gcatgatgta cagcatcctg gcc
//
LOCUS       DATIFF010000409         2059 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1746109, whole genome shotgun sequence.
ACCESSION   DATIFF010000409 DATIFF010000000
VERSION     DATIFF010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1746109"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..589)
                     /locus_tag="VLD58_06265"
     CDS             complement(<1..589)
                     /locus_tag="VLD58_06265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53939.1"
                     /translation="MTTVASPAPIAAEEASLEPAAPRPSRGHLVILGFTLLMLLMLAG
                     GKPHLVRLAYPALALALAGWLYTRGPGGYIIFAWWLWHVTPGFRRIEDYLAGGYDPQN
                     PMSLTPFLVSALAFIGVARRLPELRRLRLLPWGIAGLALVYGYFVGLLRLGLMPATHA
                     LISWLIPLVFGLYCAVNWRRYPEIESAMRQAFLLGS"
     gene            complement(586..1773)
                     /locus_tag="VLD58_06270"
     CDS             complement(586..1773)
                     /locus_tag="VLD58_06270"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSB53940.1"
                     /translation="MSRICLITHVVAPWDGQGRVNYELARHLVAEGHEVTLVASTVAA
                     PIARHQRVRWIHIPVPSVGPEPVKWLLFAAQVWLRLGQRQLAYFDIVHVHGAIAPIQA
                     DVNTSHFVHGGMQKDGPRPVNLWQRLVTAVCAWTERRAYRNARRVVAVSDGVAASLRD
                     TGVGGRGRLRVIYNGVDPEEFRPRTQDDPRPLREGLDLPASSFLVLFVGDAVSPRKNL
                     DLALVTLARLDPRFRLVVIGEHRGGRYRGMADRLGVGERTSFLGPRRDVAECLRDADA
                     LLCVSHYEPASLVLLEGMASGIPVICTPALGNARFVDHGVNGFQLRSAEDHERLAWLL
                     ETLERDPALGRRIGEAARATAAQLTWTRMARQYAALYRELLAELARTRFSDFALSSAG
                     GTA"
     gene            complement(1782..>2059)
                     /locus_tag="VLD58_06275"
     CDS             complement(1782..>2059)
                     /locus_tag="VLD58_06275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53941.1"
                     /translation="EVLRRVPVFVLMDDPITCGSHPVLGKVSLAQWKVLTKLVRMAMV
                     SRALHRGVASAVAHLQLPFERLLLQRLKETPNLELIVARRASVRLVR"
BASE COUNT          366 a          730 c          709 g          254 t
ORIGIN      
        1 ggctgccgag caggaaggcc tggcgcatcg ccgactcgat ttcggggtag cggcgccagt
       61 tgacggcaca gtacagcccg aagacgagcg ggatgagcca ggagatgagg gcgtgggtcg
      121 cgggcatgag gccgagccgg aggagaccca cgaagtagcc gtagaccagc gccagccccg
      181 cgatgcccca cgggagcaac cggagacggc ggagctcggg tagccgccgc gccacgccga
      241 tgaaggccag cgcgctcacc aggaacgggg tgagcgacat cgggttctgg ggatcgtatc
      301 cgccggcgag atagtcctcg atccgccgga aacccggcgt cacatgccag agccaccagg
      361 cgaagatgat gtacccgccc gggccgcggg tatacagcca tcccgccagc gccagcgcca
      421 gcgccgggta ggccagccgc accaggtgcg gctttccccc cgcgagcatc agcagcatca
      481 ggagcgtgaa acccaggatg acgagatggc cccgactcgg ccggggtgcg gccggctcga
      541 gcgaggcttc ttccgccgcg atcggtgcgg gcgaggcaac cgtcgtcatg cggtgcctcc
      601 cgcggaactg agcgcgaaat cggaaaaccg ggtccgcgcc agctcggcca ggagctcgcg
      661 atagagcgcc gcatactgcc gcgccatgcg ggtccaagtc agttgtgccg cggtggcgcg
      721 cgccgcctca ccgatccgcc ggcccagcgc cgggtcgcgc tccagggtct cgagcagcca
      781 ggccaggcgc tcgtggtcct ccgccgaccg gagctgaaag ccgttcacgc cgtggtcgac
      841 gaagcgggcg ttgccgagcg caggcgtgca gatcaccgga atccccgacg ccatcccctc
      901 gagcagcacc agcgacgccg gctcatagtg cgagacgcag agcagcgcat cggcatcgcg
      961 caggcactcg gccacgtcgc gccggggccc gaggaaggag gtgcgttcac ccacgccgag
     1021 ccgatcggcc atcccacgat accgccctcc gcggtgctcg ccgatcacga ccagccggaa
     1081 acgaggatcg agccgtgcca gcgtcaccag cgcgagatcg aggttcttcc ggggcgacac
     1141 cgcgtcgccc acgaagagga ccaggaacga cgaggccggg aggtcgagcc cttcacgcag
     1201 cggccgcggg tcgtcctgag tccggggacg gaattcttcc gggtcgacac cgttgtagat
     1261 cacccgcagc cgcccgcgtc cgcctacgcc cgtatcacgg agcgaggccg ccactccatc
     1321 cgagaccgcc acgaccctcc gcgcgttgcg atacgccctg cgctcggtcc aggcgcagac
     1381 cgcggtgacc agtcgctgcc acaggttcac gggcctgggc ccatccttct gcatgccgcc
     1441 atgcacgaag tggctggtgt tgacatcggc ctgaatcggc gcgatggcgc catgcacgtg
     1501 cacgatgtcg aagtacgcca gctggcgctg tcccagccgg agccagacct gggcagcgaa
     1561 caggagccac ttgacgggct ccggccccac cgaggggacc gggatgtgaa tccagcggac
     1621 acgctggtgc cgcgcgatcg gcgccgccac cgtgctcgcc accagcgtca cctcgtgccc
     1681 ctcggcgacc aggtgccggg cgagttcgta gttgacccgg ccctgaccat cccagggtgc
     1741 aaccacatgg gtgatgagac agatccggga catgcgcggc ctcagcgcac cagccgcacc
     1801 gacgcccgcc gggcgacgat gagctcgaga ttgggagttt ccttgagccg ctggagcagg
     1861 agccgctcga atgggagctg caggtgggcc acggcgctcg ccacgccgcg gtgcagcgcg
     1921 cggctcacca tcgccatgcg aaccagcttg gtcagcacct tccactgcgc cagcgacacc
     1981 ttgccgagca ccggatggct gccgcaggtg atgggatcgt ccatgagcac gaacaccggc
     2041 acccggcgga ggacctcga
//
LOCUS       DATIFF010000410         1234 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1746122, whole genome shotgun sequence.
ACCESSION   DATIFF010000410 DATIFF010000000
VERSION     DATIFF010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1234
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1746122"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            108..>1234
                     /locus_tag="VLD58_06280"
     CDS             108..>1234
                     /locus_tag="VLD58_06280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSB53942.1"
                     /translation="MQDLRTAAPALTALSEEEGMFRDAVREFAESEVRPLVSAMDEAA
                     RFEPSLIPKFFELGLMGIEVPERFGGAGGGIFMAVLAIEELARVDASAAIYVDVHNTL
                     VNNALLRGGSDGQQGRYFPRLTAGMLGAFALSEPDSGSDAFALATRADRAGDGWQLTG
                     RKFWITNGGEADLFIVFANTDFAKGYKGITGFLVERGFPGFSVGKKENKLGIRASSTT
                     ELILEQCVVPEANVLGTVGQGYKIAIETLNEGRIGIGAQMIGVGRGALEAATGYVRER
                     KQFGKAIAEFQGVQFQLAQMATDLEAARLMVYNAARLKDAGLPFAQQAAMAKLFSSQV
                     ADRTTSRCLELFGGYGYSKEYPAEKYYRDAKIGTIYEGTSN"
BASE COUNT          199 a          413 c          437 g          185 t
ORIGIN      
        1 cggtggccct cgaggtgatc gaggcggctc cgattgaacc ggccacggcc ccggggtata
       61 ctcccggcac ttgaaccccg tgccgccctg acccggagcc cgtttccatg caggacctcc
      121 gcaccgccgc tcccgccctg actgcgctgt ccgaggaaga ggggatgttc cgcgacgcgg
      181 tgcgcgagtt cgccgagtcg gaggtcaggc cgctggtgtc ggcgatggac gaggccgccc
      241 ggttcgagcc gtcgctgatc cccaagttct tcgagctcgg cctcatggga atcgaggtgc
      301 cggagcggtt cggcggcgcc ggcggcggca tcttcatggc ggtgctggcc atcgaggagc
      361 tggcccgggt ggacgcctcc gccgcgatct acgtggacgt ccacaacacc ctggtcaaca
      421 acgccctgct gcgcgggggc agcgacgggc aacagggccg gtatttcccc cggctcaccg
      481 ccggcatgct cggcgccttc gccctctccg agcccgatag cggcagcgat gccttcgccc
      541 tggccacccg ggccgatcgc gccggtgacg ggtggcagct caccgggcgg aagttctgga
      601 tcaccaacgg cggcgaggcc gacctgttca tcgtcttcgc caacaccgat ttcgccaagg
      661 gctacaaggg catcaccggc ttcctggtgg agcgcggctt ccccggcttc tcggtgggga
      721 agaaggagaa caagctgggg atccgggcct cgagcaccac cgagctcatc ctggagcagt
      781 gcgtggtgcc ggaggccaac gtgctgggga cggtgggcca gggctacaag atcgcgatcg
      841 agaccctcaa cgagggccgg atcggcatcg gggcccagat gatcggggtg ggccgcggcg
      901 cgctggaggc ggccaccggc tacgtgcggg agcggaagca gttcggcaag gcgatcgcgg
      961 agtttcaggg ggtgcagttc cagctcgccc agatggccac cgatctcgag gcggcccggc
     1021 tcatggtcta caacgccgcc cggctcaagg acgcggggct tcccttcgcc cagcaggccg
     1081 cgatggccaa gctgttcagc agccaggtgg ccgaccggac cacctcgcgc tgcctggagc
     1141 tgttcggggg ctacggctac tccaaggaat atccggccga gaagtactac cgggacgcca
     1201 agatcggcac gatctacgag ggaacgagca atat
//
LOCUS       DATIFF010000411         3448 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2055150, whole genome shotgun sequence.
ACCESSION   DATIFF010000411 DATIFF010000000
VERSION     DATIFF010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3448
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2055150"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1301
                     /locus_tag="VLD58_06285"
     CDS             <1..1301
                     /locus_tag="VLD58_06285"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HSB53943.1"
                     /translation="WTQYFTASAPFSTAAPLSYTFRNLGDGSIAKVTETTRYSIKTCA
                     ETSTLPAQFNFLPQQSIAAPISTPFESRMIDVNGDGRADLVMNHRDPASNEIAVALGQ
                     ADGTFAAPTTASHPVSPADGWGNYQLVTGDFSGDGKTDLAWVFLGALNKTYVALSTGS
                     GWTFTAVQQRPEGGWSPYKVLAGDTDGDGDDDLVFNVLGTLNTTYVNLSNGDGSFDMT
                     HGGVTHTSQGWSPYVAFLGDVNKDGRADLVWNDVNLSQPNRTWASVFQANGVALTQGP
                     LFDHPTTCCWTNYQRILGDFNGDGAVDLAFSNKKSGATALHMIKSLGNGAWTSVAYVS
                     LANLEAGDFTAYAADINGDGIDDLVWNQLGANVNRVHTALGKSNSATEVSLVGQTHPA
                     TTNWSNATTLVGDVNGDNRDDMAWVISGATVQVFVALARP"
     gene            1370..>3448
                     /locus_tag="VLD58_06290"
     CDS             1370..>3448
                     /locus_tag="VLD58_06290"
                     /inference="COORDINATES: protein motif:HMM:NF014026.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HSB53944.1"
                     /translation="MRLIPAILCLMGPSTLMAQVPELLARMTPEEKFWQLYLHPGDTT
                     AAAGAGRYGIQLNSTGSALDAVRQLNRVQRRFTDSTRLGIPIIPVAEALHGVVAPGAT
                     VFPQAIGLAASWDTALMGEVATAIAREARARGIRQVLSPVLNLATDARWGRVEETYGE
                     DPWLAGRMGEAFIRPFESIGIVTTPKHFVANVGDGGRDSYPIELSERRLRAVELAPFE
                     RAVKQAGAGSVMAAYNSVDGRPASASAWLLQRLLKDEWHFGGVVISDAGGVGGANVLH
                     GTAADYADATAQAIRSGLDVIFQGDAASAPLFKAAFDRGLIPAPVVDSAVARVLRLKF
                     ALGLFEHPFTEESEARRVMADTAAHALARRAATRSAVLLQNRGGFLPLDRSEVRSIAL
                     IGFDAKEARFGGYSGSGNRVVSALDGLRARLGPARVRYAPGPGRTVTRYVSVPASALR
                     TTHGAKGLAAEYFAGPDLSGTPRVTRNDETVDFHWTFMPPAAGLEPDWFSARWRGTLS
                     APGTGLVHLGVAGTDGFRLYLGDSLLIDAWDSQRYTEQLVPVRLVAGRPRPVRLEGRV
                     PGANARLRLVWDVGVVDRSERRITEAVETARLADVAVVMVGLEEGEFRDRASLALPGR
                     QEELIRRVAATGRPTVVVIVGGGAVTMRSWLDEVAAVLDVWYPGEAGGEALADLLFGD
                     ASPGGRLPITF"
BASE COUNT          532 a         1170 c         1193 g          553 t
ORIGIN      
        1 actggactca gtacttcacc gcctcggcgc ccttcagcac cgccgcgccc ctcagttaca
       61 ccttccgcaa cctgggtgac gggagcatcg ccaaggtgac cgagaccacc aggtacagca
      121 tcaagacctg cgccgagacc agcaccctgc cggcccagtt caacttcctg ccgcagcagt
      181 ccatcgccgc gccgatctcg acgcccttcg agagccgcat gatcgacgtc aacggagacg
      241 gccgggccga cctcgtgatg aaccaccggg atccggccag caacgaaatc gcggtcgccc
      301 tgggccaggc ggatgggacg ttcgctgccc cgaccaccgc ctcgcacccc gtctcgcccg
      361 cggacggctg gggtaactac cagctggtga ccggcgactt ctcgggtgac gggaagaccg
      421 atctggcctg ggtgttcctg ggggcgttga acaagaccta cgtcgcgctg tcgaccggga
      481 gcggctggac cttcaccgcg gtccagcagc gccctgaggg cgggtggagc ccgtacaagg
      541 tcctcgcggg cgacaccgac ggggacggcg atgacgacct ggtcttcaac gttctcggta
      601 ctctcaacac cacctacgtg aatctctcca acggggacgg aagcttcgac atgacccacg
      661 ggggagtgac ccacacctcc caggggtggt ctccctatgt ggccttcctg ggcgacgtga
      721 acaaggatgg ccgggccgac ctggtgtgga atgacgtcaa cctctcgcag cccaaccgga
      781 cctgggcctc ggtcttccag gccaatggcg ttgccctgac ccagggcccg ctgttcgatc
      841 atccgaccac ctgctgctgg accaactatc agcggatcct gggcgatttc aacggcgatg
      901 gcgccgtgga tcttgccttc agcaacaaga agagcggcgc gactgcgctg cacatgatca
      961 agagcctggg gaacggggcc tggaccagcg ttgcgtatgt cagtctcgcc aacctggaag
     1021 ctggggattt caccgcctac gccgccgaca tcaacgggga cgggatcgac gacctggtgt
     1081 ggaaccagct gggcgcgaac gtcaaccggg tccataccgc tctcggcaag tccaactcgg
     1141 cgaccgaggt gagcctcgtg ggccagaccc acccggccac gaccaactgg agtaacgcca
     1201 ccacgctcgt cggcgatgtg aacggggaca accgggacga catggcctgg gttatctccg
     1261 gagctaccgt ccaggtcttt gtggctctgg caaggcccta gaccgaacca ggaagcgaag
     1321 cgaagggcag gggcggagcg aaagctccgc ccctatcttt tccccaccca tgcgcctcat
     1381 tcccgccatc ctgtgcctga tgggcccgag tactctcatg gcccaggtcc ccgagctcct
     1441 cgcccgcatg acccccgagg agaagttctg gcagctctat ctccatccgg gggacaccac
     1501 cgcagccgcg ggcgctgggc gctacgggat ccagctcaac agcacgggca gcgccctcga
     1561 cgcggtccgg cagctcaacc gggtccagcg ccgcttcacc gacagcaccc ggctcggcat
     1621 cccgatcatc ccggtggcgg aggcgctgca cggggtcgtg gcccccggag caacggtgtt
     1681 tccccaggcc attggcctgg cggcgagctg ggataccgcg ctcatgggtg aggtggccac
     1741 cgcgatcgcg cgggaggcca gggcccgcgg gatcaggcag gtgctctcgc cggtactcaa
     1801 ccttgccacc gacgcgcgct ggggccgggt ggaggagacc tacggggaag atccctggct
     1861 cgccggccgc atgggcgagg cgttcatccg cccgttcgag tcgatcggca tcgtcaccac
     1921 ccccaagcat tttgtggcca atgtgggtga cggcgggcgg gacagttatc cgatcgagtt
     1981 gagcgagcgc cgcctgcggg ccgtcgagct ggctcccttt gagcgggcgg tgaagcaggc
     2041 tggcgccggg agcgtgatgg cggcgtacaa ctcggtggat ggtcgccccg cctcggcaag
     2101 cgcctggctc cttcagcggc tgctcaagga cgagtggcac tttggcggag tggtgatctc
     2161 cgatgccggc ggggtgggcg gtgccaacgt gctgcacggg accgccgcgg actacgccga
     2221 cgcgaccgcc caggccattc gctcggggct cgacgtgatc ttccagggcg atgccgcgag
     2281 cgcacccctc ttcaaggcgg cattcgatcg cggtctgatt ccggcgccgg tagtcgacag
     2341 cgcggtggct cgggtcctcc ggctcaagtt tgcactggga ctcttcgagc accccttcac
     2401 ggaggagtcg gaggcgcgtc gcgtcatggc cgataccgcg gcccatgcgc tcgcgcggcg
     2461 ggcggccacc cggtcggcgg tgctgctcca gaaccggggc ggcttcctgc cgctggatcg
     2521 gagcgaggta cggtccatcg ccttgatcgg gttcgacgcg aaggaggcga ggttcggcgg
     2581 ctattccggt tccggcaacc gggtggtgtc ggcgctcgac gggctgcgag cgagactggg
     2641 gcccgctcgg gtccggtatg cgcctggccc gggccgcacg gttacgcgat atgtctcggt
     2701 gcccgcctcg gcccttcgca ccacccacgg ggccaaggga ctcgccgcgg agtacttcgc
     2761 cgggccggat ctttcgggaa cgccgcgtgt cacccggaac gatgagaccg tcgatttcca
     2821 ctggaccttc atgccgccgg cagcgggact cgagcccgac tggttcagcg cccgctggcg
     2881 cggcaccctt tccgctcccg gaactggcct ggtccacctc ggtgtggccg ggaccgacgg
     2941 gttccgcctc tatctcggtg actcgctcct gatcgacgcc tgggactcgc agcgctacac
     3001 cgagcagctg gtccctgtgc ggttggtggc cgggcgcccc aggccggtca ggctggaggg
     3061 ccgggtgccc ggcgccaacg cgcggctgcg gctggtgtgg gacgtggggg tggttgatcg
     3121 gagcgaacgg cggatcacgg aggcggttga gacggcgagg ctggccgacg tcgcggtcgt
     3181 gatggtcggt ctcgaggagg gagagttccg cgaccgggcc tcactggcgc tgccgggccg
     3241 gcaggaggag ttgatccgcc gagtcgccgc caccggtcgc cccacggtgg tcgtgattgt
     3301 cggcggcggc gcggtgacga tgcgctcgtg gctcgacgag gtcgccgcgg tgctcgatgt
     3361 ctggtatccc ggcgaggccg gaggagaggc gctggccgat cttctgttcg gagacgcttc
     3421 acccggcggc cgcctcccga tcaccttc
//
LOCUS       DATIFF010000412         3538 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_977940, whole genome shotgun sequence.
ACCESSION   DATIFF010000412 DATIFF010000000
VERSION     DATIFF010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3538
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_977940"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..563
                     /locus_tag="VLD58_06295"
     CDS             <1..563
                     /locus_tag="VLD58_06295"
                     /inference="COORDINATES: protein motif:HMM:NF015129.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53945.1"
                     /translation="APAHWTGGGKSADYDIWDLESLFQAAVALANPAAQVQVVTGGWV
                     ARTEAGRLVGHAVQVDLVPPAWAAPVFGFEIEIAPDLRPPVRYRPVPSTPSAWRDVTL
                     VLGPGVTALRVEAAMRGAAGALLEQVGVISEFRSDQLGPEHRAVQFRLTFRAADRTMR
                     DEEVDPVMTRVLKAVEQQLDAKLRTS"
     gene            538..849
                     /locus_tag="VLD58_06300"
     CDS             538..849
                     /locus_tag="VLD58_06300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53946.1"
                     /translation="MTQNYERPDSRALNELAELLQHVGEELAAWRRRSLKAEAELAEV
                     KAKGGVVAGPELVQARQRVLDLEVENQALRQRIDGARDRLRMLSNRLSFLESDADEGA
                     A"
     gene            846..1172
                     /locus_tag="VLD58_06305"
     CDS             846..1172
                     /locus_tag="VLD58_06305"
                     /inference="COORDINATES: protein motif:HMM:NF017016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HSB53947.1"
                     /translation="MNTPKHAVRVTIGGEDYTVRSELPPEYTREVAAYVDAALKRIRD
                     MLPQVETHKAAILAALAITDELFQARRGDREHSARLNAMADDLARLLPPAKRGRRATG
                     PQGIIG"
     gene            1238..2812
                     /gene="rny"
                     /locus_tag="VLD58_06310"
     CDS             1238..2812
                     /gene="rny"
                     /locus_tag="VLD58_06310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HSB53948.1"
                     /translation="MSPLLSLVEGLAAGLVVSSVLFILYNRTQRKSAARTLATARVEA
                     ESLVKDASTKATEARNQMVLEGKMEILRLREDLDKEAQRRREEWDRFERRAEERDRSL
                     ERKLEEVQKQELGFSGRERTIAGREEAVRKREGEIEKLVAEQRQKLERIASLSAEEAR
                     REVLQRAEDEAKSQAQALARDIREQAKRSAEKDARKIVALAVQRISAEQTAESTVAAV
                     TLPSDEMKGRIIGREGRNIRAFEQATGVDVIIDDTPDTVIVSCFDPVRREVARRALAA
                     LITDGRIHPGRIEELVAKAQKELNAEMQELGEKAAFETGVHGLHPEIIRLIGRMRYRT
                     SYGQNIYDHSKEVSWLAGMMAAELHLDVQLAKRGALLHDIGKVLTHDNEGTHVELGVE
                     VARKYGENPLVINCIQAHHDDVPHETAESVLVQAADAISGSRPGARREAFESYVKRLT
                     KLEEIANGFAGVEKSNVIQAGREVRVIVTPDKVDDGAAITLSDQIARRIENELQYPGQ
                     IKVVVIRETRAVDIAR"
     gene            2809..>3538
                     /locus_tag="VLD58_06315"
     CDS             2809..>3538
                     /locus_tag="VLD58_06315"
                     /inference="COORDINATES: protein motif:HMM:NF014881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetrahydrofolate dehydrogenase/cyclohydrolase
                     catalytic domain-containing protein"
                     /protein_id="HSB53949.1"
                     /translation="MSARIIDGVALGKTIRDEVAAETAKLKTRGIVPGLAVVLVGENP
                     ASKAYVGSKEKACLEAGMHSVKVTRPAEIPESELLQIIDQLNADPTIHGILVQLPLPK
                     HINTEKVLLRVNPAKDVDGFHPVNVGKLVIGDPTALRPCTPWGVIQMLIRNGIETRGA
                     HAVVVGRSTIVGKPMANLLIQQGPGGNATVTVCHSQTRDLPGVCRSADILIAAIGKAE
                     FVTRDLVRPGAVVIDVGINRVDDPS"
BASE COUNT          633 a         1193 c         1231 g          481 t
ORIGIN      
        1 gggcgccggc ccactggacc ggcggcggaa agtccgccga ctacgatatc tgggacctgg
       61 agtcactgtt ccaggctgcc gtggctctgg caaatccggc cgcacaagtg caggttgtta
      121 caggtggttg ggtggcgcga accgaagcag gccggcttgt aggacacgcc gtgcaggtcg
      181 acctggttcc gcccgcctgg gccgctcccg tcttcggatt cgaaatcgag atcgcccccg
      241 atctgcgtcc gccggtccgg taccgtccgg tgccgtcgac gccatcggca tggcgggacg
      301 tgaccctggt gctgggaccc ggggtaacgg cgctgcgagt ggaagccgcg atgcgtggcg
      361 ccgcaggcgc gctgctcgag caggtagggg tgatcagcga gttccgctcg gaccagctcg
      421 gtcccgagca ccgcgccgtg cagttccggc tgaccttccg ggccgccgac cgcaccatgc
      481 gcgacgagga agtcgatccg gtaatgaccc gcgtcctcaa ggccgtggag cagcagcttg
      541 acgcaaaact acgaacgtcc tgattcccgg gccctgaacg agctggccga gctcctccag
      601 catgtggggg aggagctcgc tgcctggcgc cgccggtcgc tcaaggccga ggccgagctg
      661 gcggaagtga aggccaaggg aggcgtggtg gccgggcccg agctggtgca ggcccgccag
      721 cgggtgctcg atctggaagt ggagaaccag gcgctgcgcc agcggatcga tggcgcgcgc
      781 gaccgcctgc ggatgctcag caaccgcctg agcttcctgg agtcggacgc cgacgagggc
      841 gcagcgtgaa cacgcccaag cacgcggtgc gggtgacgat cggcggggag gattacaccg
      901 tccggtccga gctcccgccg gaatacaccc gggaagtcgc ggcgtacgtc gacgccgcgc
      961 tcaagcggat ccgggacatg ttgccgcagg tcgagaccca caaggccgcg atcctcgcgg
     1021 ccctcgccat caccgacgag ctgttccagg cccggcgggg cgatcgggaa cactcggccc
     1081 ggctcaacgc gatggccgac gacctggccc ggctgctgcc gccggccaag cgtggccgcc
     1141 gagccacagg accccagggc atcatcggct gacgaccggc cccgagccgt gtctttgctg
     1201 gagcggcgcg catgcgccct cctggagaat agatcgcatg tcgcctctct tgagcctcgt
     1261 cgaagggctc gccgccggtc tggtagtctc cagcgttctc ttcatcctct acaaccgtac
     1321 ccagcggaag agcgccgccc ggaccctcgc taccgcgcgg gtcgaggccg agtccctggt
     1381 caaggatgcc tcgaccaagg cgaccgaagc ccgcaaccag atggtgctcg agggcaagat
     1441 ggagatcctc cggctgcggg aggatctcga caaggaagcc cagcgccgcc gggaggagtg
     1501 ggaccggttc gagcgccggg ccgaggagcg cgatcgctcc ctggagcgga agctggagga
     1561 ggtgcagaag caggagctgg gcttcagcgg acgggaacgc accatcgccg ggcgggaaga
     1621 ggcggtacgc aagcgcgagg gcgaaatcga gaagctggtg gccgagcagc gccagaagct
     1681 cgagcggatc gccagtctct ccgccgaaga ggcccgccgc gaagtgctcc agcgggccga
     1741 ggacgaggcc aagagccagg cccaggcgct ggcgcgcgac atccgggagc aggccaagcg
     1801 gtcggccgag aaggacgccc ggaagatcgt ggcgctcgcg gtgcagcgga tttcggccga
     1861 gcagaccgcc gagtccaccg tggccgccgt gacgctcccc agcgatgaaa tgaagggccg
     1921 gatcatcggc cgcgagggcc ggaacatccg cgccttcgag caggccaccg gggtcgacgt
     1981 catcatcgac gacacgcccg ataccgtgat cgtgagctgc ttcgacccgg tgcggcgcga
     2041 ggtggcgcgg cgggcgctgg cggcgctgat caccgacggc cggatccatc ccggccggat
     2101 cgaggagctg gtcgccaagg cccagaagga actcaacgcc gagatgcagg agctgggcga
     2161 gaaggccgcc ttcgagaccg gagtgcacgg gctccacccc gagatcattc ggctgatcgg
     2221 acggatgcgc tatcgcacct cctacggcca gaacatctac gatcactcga aggaagtgtc
     2281 gtggctcgcc gggatgatgg cggcggagct tcacctcgac gtgcagctcg ccaagcgggg
     2341 cgcgctgctg cacgacatcg gcaaggtgct gacccacgac aacgaaggca cccatgtcga
     2401 gctgggcgtc gaagtcgcgc gcaagtacgg cgagaatccc ctggtgatca actgcatcca
     2461 ggcccatcac gacgacgtgc cgcacgagac cgccgagtcg gtgctggtgc aggcggccga
     2521 cgccatcagc ggcagccgtc cgggcgcccg gcgcgaggcg ttcgagagct acgtgaagcg
     2581 ccttaccaag ctggaagaga tcgccaacgg ctttgccggc gtcgagaagt cgaacgtgat
     2641 ccaggcgggg cgcgaggtcc gcgtcatcgt cacccccgac aaggtggacg acggcgccgc
     2701 gatcacgctg tcggaccaga tcgcccggcg gatcgagaac gagctccagt accctggtca
     2761 gatcaaggtt gtcgtcatcc gcgaaacccg agccgtggac attgcccgat gagtgcccgc
     2821 atcattgacg gagtcgccct cggtaagacc atccgcgacg aagtggccgc cgagaccgcc
     2881 aaactcaaga ccaggggcat cgtcccgggg ctcgccgtgg tgctggtggg tgagaatccc
     2941 gcctccaagg cctacgtcgg ttccaaggag aaggcctgcc tcgaggccgg catgcactcg
     3001 gtgaaggtca cccgcccggc ggagatcccc gagtcggagc tgctccagat catcgatcag
     3061 ctcaatgccg acccgacgat ccacggcatc ctggtgcagc ttccgcttcc caagcacatc
     3121 aacaccgaga aggttctcct ccgggtgaat cccgccaagg acgtggacgg cttccacccg
     3181 gtgaacgtcg gcaagctggt catcggcgac ccgaccgcgc tccgcccctg caccccgtgg
     3241 ggcgtgatcc agatgctgat ccgcaacggc atcgagacca ggggcgccca cgccgtggtc
     3301 gtcggccgga gcaccatcgt tggcaagccg atggcgaacc tgctcatcca gcagggcccc
     3361 ggcggcaacg ccaccgtcac cgtctgccac tcccagaccc gcgaccttcc cggggtctgc
     3421 cgctccgccg acatcctgat cgccgcgatc ggcaaggccg agttcgtcac ccgggacctg
     3481 gtccgtcccg gggcggtggt catcgacgtg ggcatcaacc gggtcgatga cccgagca
//
LOCUS       DATIFF010000413         1412 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1132469, whole genome shotgun sequence.
ACCESSION   DATIFF010000413 DATIFF010000000
VERSION     DATIFF010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1412
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1132469"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(219..1412)
                     /locus_tag="VLD58_06320"
                     /pseudo
     CDS             complement(219..1412)
                     /locus_tag="VLD58_06320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014525059.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
BASE COUNT          187 a          529 c          437 g          259 t
ORIGIN      
        1 agtcgaagct cgagctcttg ggctctcggc cgctgcgaaa atcgatcatc ggtccctctg
       61 cgtagtctgc acttccttga gacaccaggc gttcgggcgg tcaggcggtc agtgaacccg
      121 cctcgcccag ctccgctaga ccaccgtccg cccgcctccg cgtctgacca cctgtccgcc
      181 tgtccgcctt ctcactcatc cccgtccgac gtcgtgccga gggtgacctt gaggcccagc
      241 gcctgcagtt ccttcaccag cacgttgaac gactccggaa tccccggctc gggcaggttc
      301 tgccccttca cgatcgcctc gtacaccttg ctgcggccgt tcacgtcgtc cgacttgacc
      361 gtcagcatct cctggagcac gtgcgccgcg ccgtaggcct cgagcgccca cacttccatt
      421 tcaccgaacc gctggccgcc gaactgcgcc ttgccggcga gcggctgctg ggtgaccagc
      481 gagtacgggc cgatcgagcg ggcgtggatc ttgtcgtcga ccaggtgcga gagcttcagc
      541 atgtagatcg tgccgacggt gacatcgccc tcgaactcct ggccgctgcg gccgtcgcgc
      601 agccgggcct tgcccgacgg ggtgagcccc gccgcccgga tcagttcttc ggcggccttg
      661 gccacctcgt ccggctcgcc cttgccaccg gccagcaccg ccagcgcggg acggccggtc
      721 tcgccgagca cctcggcagt gctgagctcg ctcgacttct ccaggtcctt caccagcttc
      781 tggagattct tctggtcggc gccctcggcc gtcgacagcc ggtgctggtg atacgccagc
      841 tcctgcttcc gctgcgccag ttcccgggcc gccagctcct tcgcggccga ggtgaggaac
      901 accttgatcc ccgagtacag ctccttggtg accggggtcg ccccgcggtg cgccaggtcg
      961 ttgagccctg cctcggtcag catgtggccg acctggtgca ggtcgttggc cacggccgcg
     1021 atggtcgcgg cgtcgggctc gggggcctgc tgcttgagcc ccagggcctt cccggcccag
     1081 cggatccccg caatccggag cagcacgccg atctcggctt cgtccgcccc gcggaacacc
     1141 ggggtcttgg ccttgaagcc caggatcgag gcgcaccagc ccaggtgggt ctcgaggatc
     1201 tggcccacgt tcatgcggct cggcacgccc agcggattca gcacgatatc caccggcgag
     1261 ccgtccggca ggaacggcat gtcttcctcc ggcacgatgc gggcaacgat acccttgttg
     1321 ccgtggcggc cggccatctt gtcgcccacc gagaccttcc gcttctcggc gatgtacacc
     1381 ttcaccagct ggatgacgcc cgggggcagt tc
//
LOCUS       DATIFF010000414         1796 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_823247, whole genome shotgun sequence.
ACCESSION   DATIFF010000414 DATIFF010000000
VERSION     DATIFF010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1796
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_823247"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..209)
                     /locus_tag="VLD58_06325"
     CDS             complement(<1..209)
                     /locus_tag="VLD58_06325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53950.1"
                     /translation="MENLVYGVLFFGGITTVMLAFSPIGRALADRIRHRGGQAEPDPA
                     AQEELMRLRADVAELQERMDFAERML"
     gene            complement(209..499)
                     /locus_tag="VLD58_06330"
     CDS             complement(209..499)
                     /locus_tag="VLD58_06330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53951.1"
                     /translation="MAELIPIFGMITGLGIILGGVFGLVRLAQGPVGQALARRIQGHA
                     AGDPELAADMAELKDQVDLLRRQLEETQERVDFAERLLSQQRSAVRIPDAGA"
     gene            complement(599..814)
                     /locus_tag="VLD58_06335"
     CDS             complement(599..814)
                     /locus_tag="VLD58_06335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53952.1"
                     /translation="MTYDEIVALLAYAGGNEQPVRITTTDQSEVLGVPTSVDTHVTAH
                     EVFLRLLGQDDAEIAVSLAAIAAVELL"
     gene            988..1551
                     /locus_tag="VLD58_06340"
     CDS             988..1551
                     /locus_tag="VLD58_06340"
                     /inference="COORDINATES: protein motif:HMM:NF018257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfocyanin-like copper-binding protein"
                     /protein_id="HSB53953.1"
                     /translation="MTGTLTLCFLCCAASVACAQGRDTTMKAGVVGAGVPVPAAQASD
                     WLTWDAATSTATFKLVAGAPGAKSPFNFDGYTDGEATLIVPAGAHVVINFVNEDGTPH
                     SAEVIGDGKAPIPNMGGDPAIPAAYTRDVTQGLAQFGKDAMRFTVPDQGEYRIFCGVP
                     GHGLSGMWIRFRVDPAAKVASFGPTKP"
     gene            complement(1548..>1796)
                     /locus_tag="VLD58_06345"
     CDS             complement(1548..>1796)
                     /locus_tag="VLD58_06345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53954.1"
                     /translation="GLHFEDVRLLLEVLHRLVDKGNSVVVIEHNLDVIKTADWIIDLG
                     PEGGEDGGRIVAQGTPEEVAATAGSYTGRFLGRLLSRA"
BASE COUNT          285 a          660 c          586 g          265 t
ORIGIN      
        1 agcatgcgct cggcgaagtc catccgctcc tgcagctcgg ccacgtcggc tcgaagccgc
       61 atcagctcct cctgagctgc cggatcgggc tcggcctggc cgccccgatg ccggatgcga
      121 tcggccagcg cccgcccgat gggactgaac gcgagcatca ccgtggtgat gccgccgaag
      181 aacaggacgc catagaccag gttctccatc aggcgccagc gtccgggatt cggaccgccg
      241 accgctgctg gctcaagagc cgctcggcga aatccacccg ctcctgggtc tcctccagct
      301 gccgccggag caggtccacc tggtccttca gctccgccat gtcggcagcc agctcgggat
      361 cgccggcggc gtgcccctga atgcgccgcg cgagggcctg gccgaccggt ccctgggcca
      421 gccggacgag cccgaagacc ccgcccagga tgatgcccag cccggtgatc atgccgaaaa
      481 tggggatcag ctccgccatc gcctttcctt acttagccag ttttgccccg gctgcgggat
      541 gcccagacag cctacgggcg accgaccggg aatgtttcag ttcgagacag cgcggggatc
      601 agagcaactc cacggcggcg atcgccgcca gcgaaaccgc gatctcggcg tcgtcctggc
      661 cgagcaggcg gagaaagacc tcgtgggcgg tgacgtgcgt gtccacgctg gtgggcacgc
      721 ccagcacctc actttggtcc gtcgtggtga tgcggaccgg ttgctcgttg ccgcccgcat
      781 acgccagcag cgcgacgatc tcgtcgtaag tcacgcagcc cccgcaggaa agcgccggct
      841 cgcgtcggct cccgggctaa tgtaggccgc acgctatccc ggcgcgagga tgccgcgggc
      901 gcccgacccc gctaccttac gcccgccgcg ccccgggcat gccggttgcg cttgccaagc
      961 ggcttcgcac cccgacccga cgagtcaatg accggtactc tgaccctttg cttcctctgc
     1021 tgcgccgcca gcgtcgcctg cgcccagggc cgggacacca ccatgaaggc cggagtcgtg
     1081 ggcgccggcg tcccggtgcc cgcggcccag gcctcggact ggctcacctg ggacgcggcg
     1141 acgagcacgg ccacgttcaa gctggtggcc ggcgcgccag gggcgaagag cccgttcaac
     1201 ttcgacggat acaccgacgg cgaagccacg ctcatcgtgc cggccggggc gcacgtcgtg
     1261 atcaacttcg tcaacgagga cgggacgccg cacagcgcgg aggtgatcgg cgacgggaag
     1321 gcccccatcc ccaacatggg gggggacccc gcgatcccgg ccgcctatac cagggacgtg
     1381 acgcaagggc tggcgcagtt cgggaaggac gccatgcggt tcacggtgcc ggatcagggc
     1441 gagtaccgga tcttctgcgg cgtgccggga cacgggctgt ccggcatgtg gatccggttt
     1501 cgggtagacc cggcggcaaa ggtcgcgagc ttcgggccga ccaagcctta agcgcggctg
     1561 agcaaccgcc ccaggaaccg cccggtatag ctgcccgcgg tcgccgccac ctcctccggc
     1621 gttccctgcg ccacgatcct tcccccgtcc tccccaccct ccggtcccag atcgatgatc
     1681 cagtcggcgg tcttgatgac gtcgaggttg tgctcgatca ccaccacact gttgcccttg
     1741 tccaccagcc gatggagcac ctcgagcagc agccgcacgt cctcgaagtg caggcc
//
LOCUS       DATIFF010000415         1212 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1592614, whole genome shotgun sequence.
ACCESSION   DATIFF010000415 DATIFF010000000
VERSION     DATIFF010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1212
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1592614"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..724
                     /locus_tag="VLD58_06350"
     CDS             <1..724
                     /locus_tag="VLD58_06350"
                     /inference="COORDINATES: protein motif:HMM:NF020260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53955.1"
                     /translation="APVDEAARSPFHGSPFTGEHYASGEVELSTDLFAPPEGSPEREE
                     RGPETAPALPPILQAYETYLIYEGPEGLVFVDQHSAHERVLYEQVMKQLQGGEVQGQR
                     LLLPSTIELTDEELDAIEAYKDVLSRIGFEVEPFGGRTVALHSVPSPHPRFDAERCFR
                     EMVADLARGRFGGWANRLERFAATYACRAAVKAGEPLADRERQVLLTRLFACTLPPHD
                     VHGRSTIVQLPREELERRFGRR"
     gene            711..>1212
                     /locus_tag="VLD58_06355"
     CDS             711..>1212
                     /locus_tag="VLD58_06355"
                     /inference="COORDINATES: protein motif:HMM:NF013845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopentenyl transferase family protein"
                     /protein_id="HSB53956.1"
                     /translation="MAGAKTPAILGPTGIGKTAVAHALAAYWPLEVISADSRQIYQLL
                     DIGTAKPPRRWLATVPHHGIDLIRPGDRYSAGRFAREAPRWIEEVRSRGKMPVVVGGT
                     GLYVRTLTDGLFAEPPLDPGRRKDLERWTAQLEPVDLVRWAARLDPGFKGGGRQRASR
                     AVEVALL"
BASE COUNT          188 a          417 c          430 g          177 t
ORIGIN      
        1 tgcgccggtc gacgaagcag ctcgctcgcc cttccacgga tctccgttca caggcgagca
       61 ctatgccagc ggggaggtgg aactcagcac cgatctcttc gcgccgccgg aaggaagtcc
      121 ggaacgcgag gagcgcggtc ccgagacggc ccccgcactt ccgccgatcc tgcaggccta
      181 cgagacctat ctcatctatg aagggccgga gggactggtc tttgtcgacc agcattcggc
      241 tcacgagcgg gtgctgtacg agcaggtgat gaagcagctg cagggcgggg aggtccaggg
      301 ccagcggctg ctgttgccgt cgaccatcga gctgacggac gaggagctcg acgcgatcga
      361 ggcctacaag gacgtgctct cccggatcgg gttcgaggtg gaaccgttcg gcgggcgcac
      421 ggtggcgctt cactcggtgc cgtcaccgca tccccgcttc gacgcggagc gctgcttccg
      481 cgagatggtg gccgacctgg cccggggccg cttcggcggc tgggccaacc ggctcgagcg
      541 cttcgccgca acctacgcgt gccgcgcggc ggtgaaggcg ggagagcccc tggccgaccg
      601 ggagcggcag gtgctgctga cccggctctt cgcgtgcacc ctcccgccgc acgacgtgca
      661 cgggcgcagc accatcgtgc aactgccgcg tgaggagctg gagcgtcgct ttggccggcg
      721 ctaagactcc cgccatcctc ggacccaccg gtatcggcaa gaccgccgtc gcccacgcgc
      781 tggcagcgta ctggcctctt gaagtcatct cggccgattc ccgccagatc taccagctcc
      841 tggacatcgg caccgccaag ccaccacggc gctggctggc cacggtgccg caccacggga
      901 tcgacctgat ccgccccggt gaccggtaca gcgcggggcg cttcgcacgg gaagcgccgc
      961 ggtggatcga agaggtgcgg agccggggca agatgccggt ggtggtcggt ggcaccggtc
     1021 tgtacgtgag gaccctcacc gacggactct tcgccgagcc gccgctcgac ccggggcgcc
     1081 ggaaggatct ggaacgttgg acggcgcagc tcgaaccggt cgatctggtg cgctgggccg
     1141 cccggctcga ccccggcttc aagggcgggg gacgacaacg cgcctccagg gcggtggaag
     1201 tggcgctcct ca
//
LOCUS       DATIFF010000416         1252 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1286079, whole genome shotgun sequence.
ACCESSION   DATIFF010000416 DATIFF010000000
VERSION     DATIFF010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1286079"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1252)
                     /locus_tag="VLD58_06360"
     CDS             complement(<1..>1252)
                     /locus_tag="VLD58_06360"
                     /inference="COORDINATES: protein motif:HMM:NF009709.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophanase"
                     /protein_id="HSB53957.1"
                     /translation="FNPFLIRADRVLIDLLTDSGTGAMSSEQWAGMLRADESYAGATS
                     FYRFEDRLRLVTGFQHILPTHQGRASERILFELVGGPGKVVPNNTHFDTTRANVEHSG
                     AEAVDLLTAEGRDPASRHPFKGNMDVAALEALIERVGPERIPLVMVTVTNNSGGGQPV
                     SLANLREVRVVCERYDIPLFLDACRFAENAWFIRQREPGQSGRPVSEIVHEMFALADG
                     ATISAKKDGLVNIGGVLLLRDENLFRRASALLILTEGYVTYGGLAGRDLEAMAQGFAE
                     VLEEDYLAYRIRSVEYLGERLRAAGVAIVEPPGGHAIYLDARAFCPHLPVAQFPGQAV
                     VCGLYRIGGIRAVEIGSVMFGGDDRPPPPMELVRLAIPRRVYTQSHIDYVAEAVGELK
                     AMAGRLRGLRIVKAPAVLRHFTARF"
BASE COUNT          190 a          453 c          424 g          185 t
ORIGIN      
        1 cgaatctcgc cgtgaagtgc cgcagcaccg ccggcgcctt cacgatccgg aggccccgca
       61 ggcgccccgc catcgccttg agttcgccca ccgcctcggc cacgtagtcg atgtggctct
      121 gggtgtacac ccgccgggga atggcgaggc ggaccagctc catcggcggc ggaggacggt
      181 catcaccgcc gaacatgacg ctcccgatct ccaccgcgcg gatccccccg atccggtaga
      241 gcccgcacac caccgcctgc cccgggaact gcgccaccgg gagatgggga cagaaggcgc
      301 gcgcgtcgag atagatggcg tgacctcccg gcggttccac gatcgccacg cccgccgccc
      361 ggaggcgttc gccgagatac tccacgctcc ggatccggta ggccaggtag tcctcctcca
      421 gcacctccgc gaacccctgg gccatcgcct cgaggtcccg gcccgcgagg ccgccgtagg
      481 tgacgtatcc ctccgtcagg atgaggagcg cgctcgcccg gcggaagagg ttctcgtccc
      541 ggaggagcag gacaccgccg atgttcacca ggccgtcctt cttggcggag atggtggcgc
      601 cgtcggccag cgcgaacatc tcgtggacga tctccgatac ggggcgcccc gactgtcccg
      661 gttcccgctg ccggatgaac caggcgttct cggcgaagcg gcaggcgtcg aggaagagcg
      721 ggatgtcgta gcgctcgcac accacgcgga cctcgcgcag gttggccagg ctgaccggct
      781 ggccgccgcc gctgttgttg gtgacggtca ccatgaccag ggggatccgc tccgggccga
      841 cccgctcgat cagggcctcg agcgccgcca cgtccatgtt ccccttgaaa ggatggcgcg
      901 aggccggatc ccgcccctcc gcggtcagca ggtccaccgc ctcggccccg ctgtgctcga
      961 cgttggcccg ggtggtgtcg aagtgcgtgt tgttcggcac cacctttccg ggtccgccca
     1021 ccagctcgaa gaggatgcgc tcgctggccc ggccctggtg cgtcggcagg atgtgctgga
     1081 acccggtcac caggcggagc cggtcctcga agcggtagaa ggaggtcgcg ccggcgtacg
     1141 actcgtcggc gcgaagcatc cccgcccact gctcgctgct cattgccccg gtaccggagt
     1201 cggtaagcag gtcgatcagg acccggtccg cccggatgag gaagggattg aa
//
LOCUS       DATIFF010000417         1795 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_362539, whole genome shotgun sequence.
ACCESSION   DATIFF010000417 DATIFF010000000
VERSION     DATIFF010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1795
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_362539"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..533
                     /locus_tag="VLD58_06365"
     CDS             <1..533
                     /locus_tag="VLD58_06365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HSB53958.1"
                     /translation="LLRDLGPALSPFNAFLFLQGLETLPLRIRRHSENALALASWLER
                     DPRIEWVSYPGLESHPEHGNADRYLEGGFGGILTFGVKGGHAAARAVIDRVKLYSLLA
                     NVGDAKSLIIHPASTTHEQLTPEQQRATGVVPELIRISAGLEDLRDLIADLDQALGPA
                     AVKPAAEVENTVGAGR"
     gene            530..1582
                     /locus_tag="VLD58_06370"
     CDS             530..1582
                     /locus_tag="VLD58_06370"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53959.1"
                     /translation="MSDRPTVVKLGGDALASPERIAAQARHLACRAAGGPVVAVASAR
                     RGVTDHLLRLTVEVAAASRPATEATDADAARGSRAEADRAVAAGEVVAASLLALALNQ
                     LGVPAMSLDAREAGVLSIGKFGKARIKSVTPRRIRRLLDSGVVPVVTGFQGWQRGRVA
                     TLGRGGTDTSAVALGCALHAQRVVFVKEAHGLRTADPRLVPDAAVIAEAPHGFLAALA
                     AEGSKVVQLEAALLAERHGLPLEFWSLEGAAAQTLVHAGADGTGLRAVATATPAAGEP
                     GKVTVIGGNPAEAAHAVDQLRAALTQSGITPSDIQPAPNGVRFVLPAAQLVAATQALH
                     RVFVIEAPRAPALRAS"
     gene            1586..>1795
                     /locus_tag="VLD58_06375"
     CDS             1586..>1795
                     /locus_tag="VLD58_06375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53960.1"
                     /translation="MTGLTSAALRFAVHSADLELGDFRTERGGVIPNARLHYRILGDP
                     ALGRVRGWSLVFHALTGSASVDDWWA"
BASE COUNT          257 a          632 c          640 g          266 t
ORIGIN      
        1 agctgctgcg cgacctcgga ccggcacttt cccccttcaa cgcgttcctc ttcctgcagg
       61 ggctggagac gcttccgctt cggatccggc gtcattccga gaatgccctg gccctggcga
      121 gctggctgga acgcgatccc cgcatcgagt gggtgtccta ccccgggctc gagagccatc
      181 cggagcacgg caacgccgat cgctacctcg agggaggctt cggcggcata ctcacctttg
      241 gtgtcaaggg aggccacgcg gccgcccgcg cagtgatcga ccgagtgaag ctgtactcgc
      301 tcctggccaa tgtgggcgac gccaagtccc tcatcatcca tcctgcgtcc accacgcacg
      361 agcagctcac gcccgagcag cagcgggcca ccggagtagt cccggaactg atccggatct
      421 cggccggtct cgaggacctc cgtgacctca ttgccgatct cgatcaggcg ctcggccccg
      481 cagcggtcaa gccggctgcc gaggtcgaga acaccgtggg agccggtcga tgagcgatcg
      541 acctaccgtg gtgaagctcg ggggggacgc tctggcctcc cccgagcgga tcgcggctca
      601 ggcccggcac ctcgcgtgcc gggccgccgg tggtccggtg gtggccgtgg ccagcgcgcg
      661 ccgcggcgtc accgaccacc tgctccggct gacggtcgag gtggcggccg catcccggcc
      721 ggccaccgag gccacggacg ccgatgcggc acgaggaagc cgggcggagg ccgatcgggc
      781 cgtggcggcg ggcgaagtcg tggctgcctc cttgctggca ctggcactga atcagctcgg
      841 tgtgccagcc atgtcgctgg acgcgcgcga ggccggcgtg ctgagtatcg gaaagtttgg
      901 aaaggcgcgg atcaagtcgg taacaccgcg tcgaatccgt cgcctgctgg acagcggcgt
      961 cgtccccgtg gtaaccggat tccaggggtg gcagcgaggt cgcgtcgcca cgctcggccg
     1021 gggcggaacc gacacctcgg cggtggcgct cggctgcgcg ctgcacgcgc aacgggtcgt
     1081 cttcgtaaag gaggcccacg gacttcggac cgccgaccca aggctggtcc cggatgccgc
     1141 ggtcatcgcg gaggcgccgc acggcttcct ggccgcgctc gccgcggaag ggtccaaggt
     1201 ggtacaactc gaggcggcgc tgctggccga gcgccacggc ctgcccctgg agttctggtc
     1261 actcgaggga gcggcagcgc agacgctggt gcacgcaggg gctgacggca ctggactccg
     1321 ggcggtcgcg acggcgaccc cggctgcggg agagcccggg aaggtgacgg tgatcggggg
     1381 gaatcccgcg gaggcggcgc atgccgtgga tcagcttcgg gctgccctca cccagtccgg
     1441 gataacgccc agcgacatcc agcccgcgcc gaacggggtc cgcttcgtgc tccccgccgc
     1501 gcagctggtc gcggccacgc aggcgctcca ccgcgtgttc gtgatcgaag cgccgcgcgc
     1561 cccagcgctc agggcatcct gatccgtgac cggactcacc tccgccgccc tccgattcgc
     1621 cgtccactcg gccgatctcg agctgggtga cttccgcacc gagcggggcg gcgtgattcc
     1681 caatgcccgg ctgcattacc ggattctggg tgaccctgcc ctcggacggg tgcgcggctg
     1741 gagcctggtg ttccacgccc tcaccggaag cgccagcgtg gacgactggt gggcg
//
LOCUS       DATIFF010000418         1242 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1901447, whole genome shotgun sequence.
ACCESSION   DATIFF010000418 DATIFF010000000
VERSION     DATIFF010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1901447"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            389..>1242
                     /locus_tag="VLD58_06380"
     CDS             389..>1242
                     /locus_tag="VLD58_06380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53961.1"
                     /translation="MASLYPKKIGGKTYWYLREMARVDGKPRMVSERYVGSAAEVAAL
                     LDARERAVMPDRTRHLGFGDVAAAWGVLAELGVAGIVDEVVGPGPAGLPLTAGTYLAL
                     AALNRLVAPCSKAAFADWWKSTAADRFTKIGARALDHRRFWDAMHAVTAQQLERIGQT
                     IALRLIEVSGVDVSSVALDMTNFATFITTANAKAPIAQRGKAKQKRSDLRLVGLGLVV
                     TRDGGIPLTWHAYPGDKPDVTQFPAMIDQLRRRYEAITAAAGRTSGSAEMTVVFDAGQ
                     NSADNFAHL"
BASE COUNT          193 a          402 c          439 g          208 t
ORIGIN      
        1 catactgtcc gtcggctcga tgtaacggtt atcagcaata caacgacgac tctcataggc
       61 cggcctcggc ggccgacggc gattgttgat ggacagttga caaccgacgt gaatacacgg
      121 actccctctt cccagggtta acccgattgc gtgtccccgc ggccgccgag gcctctgccc
      181 ggtcccccgt accgaaaatg gtcaccgtat tcggaggtgc cattcctacc tgtgtcaaag
      241 gccccgcaag ggtcgcgggc cctctagccc gactttccga gtgatcttgg gtttctggcg
      301 cccgttcggt cggtcctgaa gcggctttcc ctgcgacaca ccggttttgg tgcttgcctg
      361 tcggctcggg aatgtgtatg acttaaatgt ggcgagtttg tacccgaaga agatcggcgg
      421 caagacgtac tggtacctgc gggagatggc ccgcgtggac ggcaagccga ggatggtctc
      481 ggagcggtac gtgggctcgg ccgccgaggt ggcggcgctg ctggatgccc gcgagcgcgc
      541 ggtcatgccg gaccgcaccc ggcacctggg gttcggggac gtcgccgcgg cctggggggt
      601 gctggccgag ctgggtgtgg cgggcatcgt cgacgaggtg gtcgggcccg gcccggccgg
      661 gctgccgctg acggcgggca cctacctggc gttggcggcg ctgaaccggc tggtggcccc
      721 gtgttcgaag gcggcgttcg cggactggtg gaagtccacc gccgcggacc ggttcaccaa
      781 gatcggtgcc cgcgccctgg accaccggcg gttctgggac gccatgcacg cggtcaccgc
      841 gcagcagttg gagcggatcg gccagacgat cgcgctgcgg ttgatcgagg tcagcggggt
      901 cgatgtctcc tcggtggcgc tggacatgac caacttcgcg accttcatca ccaccgcgaa
      961 cgcgaaggcc ccgatcgcgc agcggggcaa ggcgaagcag aaacgcagcg acctgcggct
     1021 ggtcgggctg ggcctggtgg tcacccgtga cggcgggatc ccgttgacct ggcatgccta
     1081 ccccggcgac aagccggacg tcacccagtt cccggcgatg atcgaccagc tccgccggcg
     1141 atacgaggcg atcaccgccg cggccgggcg caccagcggc agcgcggaga tgacggtggt
     1201 cttcgacgcc gggcagaaca gcgccgacaa cttcgcccac ct
//
LOCUS       DATIFF010000419         1643 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_823686, whole genome shotgun sequence.
ACCESSION   DATIFF010000419 DATIFF010000000
VERSION     DATIFF010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1643
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_823686"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..653
                     /locus_tag="VLD58_06385"
     CDS             <1..653
                     /locus_tag="VLD58_06385"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSB53962.1"
                     /translation="RAELEAIAELCQRHDAYAVTDEIYEHIRYAGEHIPIATLPGMRE
                     RTITISGASKTFSITGWRIGTIISPAAVTEAIRKVHDFLTVGAPAPLQEGLATVMDTF
                     GPEFYTGMAEEYRRRRNLLYAALCQAGFQCIAPDGAYYILADFSSLSDLPDTEFALWL
                     ARERGVAPVPGSSFFSRPELGRKYVRFVFCKTDDLLTEAAARLTGSGTVGAVDVQR"
     gene            699..1073
                     /locus_tag="VLD58_06390"
     CDS             699..1073
                     /locus_tag="VLD58_06390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53963.1"
                     /translation="MKWAPFRASLALVQLVLLLVMQLAEGTGVHRCPAHDGVGIVAEQ
                     AHAMHDMMGHDGQQQTHSEKAHSCHCIGACSTATVMHQGPAAPVLTVAIVRHQPLPSV
                     AAPSLRGTVRLLPFAIGPPLSA"
     gene            1143..>1643
                     /locus_tag="VLD58_06395"
     CDS             1143..>1643
                     /locus_tag="VLD58_06395"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HSB53964.1"
                     /translation="MQRQCCAVRALLGVAALLGAAGVCSLAAQQPVRDTTAVELETIT
                     VTAPGPRATPPVELSVEVPAKMVERQHSSNAYDLIRRAAGIEVHEQGQGPGWASDVVI
                     RGFTSDHSSDVLLVLDGVPVNLPIHGHVEGYSDWTILSPAAISGIRVIHGPASPLYGN
                     FAVGGAV"
BASE COUNT          239 a          610 c          520 g          274 t
ORIGIN      
        1 cccgggccga gctcgaggcc atcgccgaac tgtgccagcg ccacgatgcc tatgcggtga
       61 ccgacgagat ctacgagcac atccgctatg ccggcgagca cattccgatt gccaccctgc
      121 cgggaatgcg ggagcggacc atcaccatca gcggggcctc caagaccttc agcatcaccg
      181 gctggcggat cgggaccatc atctcccccg ctgccgtgac cgaggcgatc cggaaggtcc
      241 acgacttcct caccgtcggc gcgcccgccc cgctccagga gggcctggca acggtgatgg
      301 acaccttcgg ccccgagttc tacaccggga tggcggagga ataccgccgc cgccgcaact
      361 tgctctacgc ggccctttgc caggccggct tccagtgcat cgcacctgac ggagcgtact
      421 acatcctggc cgatttctcg tccctctcgg atcttcccga caccgagttc gccctctggc
      481 tggcgcggga acgcggggtg gccccggtgc ccgggtccag cttcttcagc cggccggagc
      541 tgggccggaa atacgtccgg ttcgtcttct gcaagaccga cgacctgctg accgaggcgg
      601 ctgcccgcct gaccggaagc gggaccgtcg gggcggtgga cgttcagcga tgagaccccg
      661 cctttcccgt gccgcatggt cggcttagtc ttagcgccat gaagtgggcc cctttccgcg
      721 cctcgctggc cctggtccag ctggtcctgc tgcttgtcat gcagctggcc gaaggcaccg
      781 gcgtgcaccg ctgtccggcg cacgacgggg tcggcattgt ggccgagcaa gcccacgcga
      841 tgcacgacat gatggggcac gacggtcagc aacagaccca cagcgagaag gcccacagct
      901 gtcactgcat cggcgcctgt tccaccgcca ccgtgatgca tcagggcccc gcggccccgg
      961 tcctcaccgt ggccatcgtc cggcatcagc cactgccgtc cgtcgcggcg ccttcgctcc
     1021 gcggtaccgt ccgtctcctt cccttcgcga tcggccctcc cctctcagcc tgatctggaa
     1081 ccgttgaccg ttcggccatc cgggccggcg gcgtcgagtt gccttctact tcaggcctga
     1141 tcatgcaacg ccagtgctgt gcggtgcgcg ccctgctggg cgtggccgcg ctgctgggcg
     1201 ccgccggggt ttgctccctc gcggcccagc aacccgtacg cgataccacc gcggtggagc
     1261 tcgagaccat caccgtcacg gcccccggcc cgcgcgccac tccgccggtc gagctgtcgg
     1321 tggaagtgcc cgcgaaaatg gtggagcggc aacacagctc caacgcctac gacctgatcc
     1381 ggcgcgccgc cggcatcgag gtacacgagc agggacaggg acccggctgg gcctcggatg
     1441 tcgtcatccg cggcttcacc tcggatcact cgtccgacgt cctgctggtg ctcgacggtg
     1501 tgccggtcaa cctcccgatc cacgggcacg tggagggata ctccgactgg accattctct
     1561 cgccggcggc gatctcgggc atccgggtga ttcacggccc ggccagcccg ctctacggca
     1621 acttcgcggt gggcggcgcg gtc
//
LOCUS       DATIFF010000420         1104 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_978797, whole genome shotgun sequence.
ACCESSION   DATIFF010000420 DATIFF010000000
VERSION     DATIFF010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_978797"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(111..>1104)
                     /locus_tag="VLD58_06400"
     CDS             complement(111..>1104)
                     /locus_tag="VLD58_06400"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HSB53965.1"
                     /translation="GAGKVGRGLRRLPDEEDEEDENADATFFRLYDTRFLRRETKDYV
                     PKLIAAALIAKQPEKYGFERPAEITPLAYDSLIVPDATGLDVIARLADTTVLALRDLN
                     PQYVRLVTPPRRDAIIRLPLGSGGIVAERFAALPDKGRVSYVEHTVTRGQSLGAIARL
                     YRVTPSLITDANPGVRASRLRPGTHLLIPTSFVPPLPEPAPVAARVGPGHGGTTIRYK
                     VRSGESLWTIAGKYNTTVERIRSLNALSRNERLRAGQVIRVPAAVDTVADPGPSPKRV
                     TPVPTGPRTHVVRRGETLSGIATRYGVAVSAIRSANKMDNDSVLKAGSRLVIPD"
BASE COUNT          179 a          373 c          381 g          171 t
ORIGIN      
        1 gagtggcgaa ctaaggcggc caggcggcca ggacgaagaa agggcggcgc atcgcaagcg
       61 atgcgccgcc ctttcatttt ccagctgtcc gctttgccgc cgtgccgcct tcagtccgga
      121 atcaccagcc tcgatcccgc cttgagcacc gagtcattgt ccatcttgtt ggccgaccga
      181 atcgccgaga ccgccacgcc gtaacgggtg gcgatgccgc tcagcgtctc gccccggcgc
      241 acgacgtggg tgcgcggacc cgtcggcacc ggcgtgacgc gcttgggcga cgggcccgga
      301 tcggccacgg tatccactgc cgcgggcacc cgaatgacct ggccggcccg gagccgctcg
      361 ttccggctca gcgcattgag cgaacggatc cgctccacgg tggtgttgta cttccccgcg
      421 atggtccaga gcgattcgcc gctgcgcacc ttgtagcgga tcgtggtacc accgtgtccc
      481 gggccgaccc gggccgcgac cggagcaggc tcggggagcg gcggaacgaa gctggtagga
      541 atcaggagat gagtcccggg gcggagccgg ctggcgcgga ccccaggatt ggcatcggtg
      601 atgagcgacg gagtcacccg gtacagccgg gcgatcgcgc ccagcgactg gcctcgcgtc
      661 acggtgtgct cgacataact cacccgcccc ttgtcgggca gcgccgcgaa ccgctcggcc
      721 acaataccac cgctgccgag cgggaggcga atgatggcgt cacggcgagg cggggtgacc
      781 agccggacat actgaggatt gaggtccctg agggccagca ccgtggtgtc ggccagcctg
      841 gcaatcacgt ccaacccagt cgcatcgggc acgatcagcg aatcgtacgc gagcggggtg
      901 atctccgccg ggcgctcgaa gccatacttc tcgggctgct tcgcgatcag ggccgcggcg
      961 atgagcttgg ggacatagtc cttggtctcg cgccggagga aacgggtatc gtagaggcgg
     1021 aagaaggtgg catcggcatt ctcgtcctcc tcatcctcct cgtccggcag gcgtctgagc
     1081 ccccggccca ccttgccggc gccg
//
LOCUS       DATIFF010000421         2152 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1133166, whole genome shotgun sequence.
ACCESSION   DATIFF010000421 DATIFF010000000
VERSION     DATIFF010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2152
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1133166"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..549
                     /locus_tag="VLD58_06405"
     CDS             <1..549
                     /locus_tag="VLD58_06405"
                     /inference="COORDINATES: protein motif:HMM:NF012589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY family carbohydrate kinase"
                     /protein_id="HSB53966.1"
                     /translation="YPMLTPQPGWAEQDPAVVYPAVLEAIREAYTARPAGCFADAVAF
                     SAQWYSTMPVAADDRALSPYLTWSDRRSAAIADGLRRSERGRRIYQATGCPLDAIYPL
                     SKIIWLRQAGLPATPTRFVSIKEYVVRRLFGEYVVDWSMASSTGLFDIRRRDWSPEAL
                     EAAGIDRTRLSAPVSPYQTFRR"
     gene            598..1425
                     /locus_tag="VLD58_06410"
     CDS             598..1425
                     /locus_tag="VLD58_06410"
                     /inference="COORDINATES: protein motif:HMM:NF014801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY-family carbohydrate kinase"
                     /protein_id="HSB53967.1"
                     /translation="MIGAGDGVLSSVGVGAVGRGIAAVNVGTSAACRYLISTPTVDRQ
                     ERLWTYALDERRWVTGGIVSSGGIVYDWFVRQCAGAGPEGNPPGPEVHAALNELAARV
                     PPGAEGLIFLPYLSGEQCPVWDPETTGGFFGLTLRHGRGHLARAVYEGIALSLARVAE
                     ALADAIEPIEEIRVTGGLLASSTWLQIAADMWGTRILVPESPEGSALGAAVLAWVALG
                     MASDLGVARGLVSPARIVEPDPDRRLFYQGHLDRAARVLAGVKAMRTSSARHAETGI"
     gene            1491..>2152
                     /locus_tag="VLD58_06415"
     CDS             1491..>2152
                     /locus_tag="VLD58_06415"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSB53968.1"
                     /translation="MRTPHRTVLVSTRSFGKEIREPLLRLMDQGCRILEWREGGGLPE
                     SDLLTQLREADAWIVAFHPIGSTLLDAAPRLRIIAKHGVGVDNIDIAAATARGIVIAT
                     APSTNDQAVADLTMGLLLAMLRRIPEANGSVKAGRWERFLGCGLGGKVMGILGLGRIG
                     QNVARRARGFGVVLIGADPLWPEDAARDIGIRRVELHELLAQADIISLHAPLTPQTTG
                     LIG"
BASE COUNT          311 a          737 c          755 g          349 t
ORIGIN      
        1 taccccatgc tcacaccgca accgggctgg gccgagcagg acccggcggt cgtctacccc
       61 gccgtattgg aggccatccg ggaggcctat accgcacggc ctgcgggctg ctttgcggac
      121 gcggtggcgt tcagcgccca gtggtacagc acgatgccgg tcgcggcgga cgaccgggcg
      181 ctctctccat acctcacctg gtcggatcgc cgcagcgccg ccatcgccga cggcctgcgg
      241 cggtccgagc gcggacgccg catctatcag gccaccgggt gtccgctgga cgcgatctac
      301 cccctttcga agatcatctg gctccggcag gcgggcctgc ccgccacgcc gacgcgcttc
      361 gtgtctatca aggagtacgt cgtccgccgc ctcttcggcg agtatgtcgt ggactggtcc
      421 atggcctcct ccaccggtct cttcgatatc cggcgacggg actggtcgcc ggaggcgttg
      481 gaggccgccg gcatcgaccg cacccgcctt tccgcgcccg tttctcccta tcagacgttc
      541 cggcgctaga catccgaggc cctggccggc accggtcttc cgcagggcat tccctgcgtg
      601 atcggcgcgg gcgacggcgt cctgtccagc gtcggtgtcg gcgccgtggg gcgggggatt
      661 gccgcggtca atgtcggaac gagcgccgcc tgccgatacc tgatctcgac gccgacagtc
      721 gatcggcagg aacgactctg gacctacgcg ctggatgagc gccggtgggt gaccggcggg
      781 atcgtgagca gcggcgggat cgtctacgac tggttcgtcc ggcagtgcgc gggcgccggc
      841 ccggagggca accctcccgg gccggaagtg catgccgcgc tcaacgagct ggcagcccgg
      901 gttccgccgg gagccgaagg gctgatcttt ctcccgtacc tttccggcga gcagtgcccc
      961 gtctgggacc ccgagacgac gggcggcttc ttcgggctga cgcttcgcca cgggcgcggg
     1021 cacctcgccc gcgcggtcta cgaaggcatc gccctctcgc tggcccgcgt ggcggaggcg
     1081 ctcgcggacg cgatcgagcc catcgaggag atcagggtga ccggaggcct tctggcatcc
     1141 tccacctggc tgcagatcgc agcggacatg tggggaacgc ggatcctggt gcccgagtcc
     1201 cctgagggct ccgccctcgg cgcggcggtc ctggcctggg ttgctctcgg gatggcctcc
     1261 gatctgggtg tcgcgcgggg gctggtgagt cccgcacgca tcgtggaacc ggacccggat
     1321 cgtcgcctgt tctatcaggg ccatctcgac cgggcagcac gagtgctggc cggagtgaag
     1381 gctatgcgca cttcaagcgc tcggcatgcg gagacgggaa tctagagccg gcagagaggg
     1441 gtacgcgcga agcgggtgca acgggcccga ctctcggcgg agacagaatc atgcgcacgc
     1501 cacaccgcac agtcctcgta agcacccgat cgttcggaaa agagatccgt gagccgctgc
     1561 tgcggttgat ggaccagggg tgtcgcatct tggagtggcg cgaggggggc ggccttcccg
     1621 agtccgacct gctgacgcag ctccgcgagg ccgacgcctg gatcgtggcg tttcacccca
     1681 ttggctcgac cctgctggat gccgcgcctc ggctgcggat catcgccaag catggcgtcg
     1741 gagtggataa catcgacatc gcggccgcga ccgcgcgcgg catcgtgatc gcaaccgctc
     1801 ccagcaccaa tgaccaggcg gtcgccgacc tgaccatggg cctccttctg gctatgctcc
     1861 ggcgcattcc cgaggccaac ggcagcgtga aggccggccg ctgggagcgg ttcctgggtt
     1921 gcggcttagg cggaaaggtg atggggatcc tcggcctcgg ccggatcggc cagaacgtgg
     1981 ctcgacgggc ccgcggcttc ggcgtggtac tcatcggcgc ggacccgctc tggccggaag
     2041 atgcagcccg cgacatcggc atccggcggg tagagctgca cgagctgttg gcgcaggccg
     2101 atatcatcag cctgcatgcg cccctgaccc cccaaacgac tgggctgatc gg
//
LOCUS       DATIFF010000422         2061 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1133448, whole genome shotgun sequence.
ACCESSION   DATIFF010000422 DATIFF010000000
VERSION     DATIFF010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2061
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1133448"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..>2061
                     /locus_tag="VLD58_06420"
     CDS             62..>2061
                     /locus_tag="VLD58_06420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53969.1"
                     /translation="MAFGLPVAVTLAAAAWIVFGPKRRGPTVVEGAETIAVLPFSATG
                     AGVELMGEGMVDLLSTNLNAVGGIKAVDPRIVLSRWKKSGATGGADVETALRIARSVK
                     AQAALVGSIVATGSRVRVSADLYGPEGKSLAKAAVDGAADSVLSLVDELSRSLVKEIW
                     RSKEPVPSLRVSGLTTNSLDAMREYLVGEQFYRRSEWDSAGAAFQRAIDQDSTFALAH
                     YRLAMALGWKGGYGLPRARDASAAALRFSSRMPPRERALIAAYQLFSQGKLAAVDSAR
                     AYVATYPDDIEGWYLLGETQYHTRERTGVDPVTIEGSFEKVVAADSTLTPALIHPLEL
                     SIASLDSVRFGRYLALLRNGASPDEYEAYRAAGALVFQNRAPDTLATRLLGGHGGAVM
                     AGFAAVHKEADAGSDKILARLGSLSSVMSRNNPDAAKLQLATARGLVLSSLGRFKEAS
                     KLADSLKPVSQEQSGAVRLFPYMLGFAPPGYEKDYMAKFDQAPISNPFGGYITAVIHL
                     AQGDGPRGGRIIDSLLAADTTKFPPPLMLLLHGARGWHSVIKGDTAKGLAEMSSALAE
                     QNQMGSFMVSPLRLQYAAILASRPATRAQGIALLSNGFSNELGFLPMANYALAKAYEA
                     AGDKAKAAEAYGRFLHQWDKADESARPRVDGAKEALAKLAGEG"
BASE COUNT          324 a          675 c          759 g          303 t
ORIGIN      
        1 ggtggaacgg gcggctgggg gaggcgccgg tgcgatagcg gaacggcgcc ggctcaggcg
       61 gttggcgttc gggctgccgg tcgcggtcac gctggcagcg gcggcgtgga tcgtcttcgg
      121 cccgaaacgg cgcggcccca ccgtggtcga aggcgccgag acgatcgcgg tcctgccgtt
      181 cagcgcgacc ggcgccggcg ttgagctgat gggcgagggg atggtcgacc tgctgtccac
      241 caacctcaac gcggtcggcg gtatcaaggc ggtggatccg cggatcgtgc tctcgcgctg
      301 gaagaagtcg ggcgccaccg gcggggccga tgtggagact gcgctccgca tcgcgcgctc
      361 ggtgaaggcc caggcggcgc tggtcggcag tatcgtggcc accggctcac gggtgcgggt
      421 gagcgcggat ctctacgggc cggagggaaa gtcgctggcg aaggcggcgg tggacggggc
      481 ggccgacagc gtgctctcgc tggtcgacga gctgagccga tcgctggtga aggagatctg
      541 gcgttcgaag gagccggtgc cgtcactccg ggtgagcggc ctcaccacca actccctcga
      601 cgcgatgcgc gagtacctgg tcggggagca gttctatcgc cggtcggagt gggattccgc
      661 cggggccgcg ttccagcgcg ccatcgacca ggattcgacc ttcgcgctgg cgcactaccg
      721 gctggcgatg gcgctcggct ggaagggtgg gtacggcctg ccgcgggcca gggacgcgag
      781 cgcagcggcg ctccgcttct ccagccgcat gcctccgcgg gaacgcgccc tgatcgcggc
      841 ctaccagctc ttctcgcaag gcaagctggc agccgtcgac tcggcccgag cgtacgtcgc
      901 gacctacccc gatgacattg aaggatggta tctgctgggc gagacccagt atcacacccg
      961 ggagcggacc ggagtcgacc cggtcacgat cgagggctcg ttcgagaagg tggtggcggc
     1021 cgactcgacc ctgaccccgg cgctgatcca cccgctcgag ctgagcatcg catcgctcga
     1081 ctcggtgcgc ttcggccgct atctcgcgct gctccgcaac ggcgcgagtc ccgacgagta
     1141 cgaagcctat cgcgcggccg gcgccctggt gttccagaac cgcgctcccg acaccctggc
     1201 cacccggttg ctcggcggcc atggcggcgc ggtcatggcc gggttcgccg cggtgcacaa
     1261 ggaagccgac gccggcagcg acaagatcct tgcccgcctc ggcagcctct ccagcgtcat
     1321 gagccgcaac aatccggatg ccgccaagct gcaactggcg acggcccggg gactggtcct
     1381 gtcgagcctc ggacggttca aggaggcgtc gaagctggcc gactcgctca agccggtgtc
     1441 ccaggagcag tccggcgcgg tgcgactgtt cccgtacatg ctgggcttcg ctccgccggg
     1501 atacgagaag gactacatgg ccaagttcga tcaggcgccg atcagcaatc ccttcggcgg
     1561 gtacatcacg gcggtgattc atctggccca gggtgacggg ccgcgggggg gcaggatcat
     1621 cgacagcctg ctcgcggccg acaccaccaa gttcccgcct ccgctgatgc tgctcctcca
     1681 cggtgcccgc ggttggcata gcgtgatcaa gggcgatacc gcaaaagggc tggcggagat
     1741 gagctcggcc ctggccgagc agaaccagat ggggagtttc atggtgagcc cgctccggct
     1801 tcagtacgcc gcgatcctgg cctcccggcc agccacccgg gcgcagggca tcgcgctgct
     1861 cagcaacgga ttcagcaacg aactcggctt cctcccgatg gccaactacg cgctggcgaa
     1921 agcctacgag gcggcggggg acaaggccaa ggcagccgag gcgtacggcc gcttcctgca
     1981 tcagtgggac aaggcggacg agtcggccag gccgcgggtg gatggggcga aggaagcgct
     2041 ggcgaagctg gcgggggagg g
//
LOCUS       DATIFF010000423         2477 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_210396, whole genome shotgun sequence.
ACCESSION   DATIFF010000423 DATIFF010000000
VERSION     DATIFF010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2477
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_210396"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1482
                     /locus_tag="VLD58_06425"
     CDS             <1..1482
                     /locus_tag="VLD58_06425"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSB53970.1"
                     /translation="FRTVWRADWEAQGKSALGPVTQPLRPGDTLPSVATLAHVAQGFA
                     RCNDPAEEARRFYFRYDHRTGELLTHGAIPDAARRAELIDSLYPLLELPPMDLFTIGA
                     GPSNPGKRRVILAGHKLGADGRAVATYGLETCMRVLGRDAFPRVFENYPLLPPALVGN
                     LPNDSIVSITVTRGYDGTAPGETLYVSPVSYPETYRARVVERPDNITLRFEAHLRPSL
                     ATQLVPSRPRGFRVLWLLALLGATLALAAVVVAQIRREQQLVRARSDFVSSVSHELRT
                     PLAQIRLFAESLKLGSVRSERDRGAAVEVILQESQRLMHLVDNVLHFSRPNGRGRTPF
                     PERVNLSELAADVVHGFEPLAKGRGIRFRVDAQPRVEVQVEPGPTRQILLNLLDNAVK
                     FSPPDLAVTVRVWTEDGWACLSVADQGPGIPPADRDLIWKPFVRLRANPSRAPGSGIG
                     LAVVRDLADRMDGQVQVDDAPGGGTVFTVRFPAFRVALAVATP"
     gene            1640..2335
                     /locus_tag="VLD58_06430"
     CDS             1640..2335
                     /locus_tag="VLD58_06430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSB53971.1"
                     /translation="MQRILVVEDNANLALGLRMNLEHGGFSTDLAISGEDGLKRVRES
                     RFDLMILDMMLPGGLDGFQVLERLRSGGRTLPVIVVTARTEEADKLRGFQLGADDYVT
                     KPFGILELIARVHAVLRRVTRGSEEAPAETAPLVGGDIELSPLNRTVTRGGERVHLRP
                     KEFDLLHRLMSAPGQVLARRKLLQEVWGYQPGVYSRTLDVHVADLRRKLEDNPENPRH
                     LVTVHSIGYRFDP"
BASE COUNT          361 a          834 c          863 g          419 t
ORIGIN      
        1 ttccgcaccg tctggcgggc ggactgggag gcgcagggaa agtcggcgct cgggccggtg
       61 acgcagccgc tccgccccgg cgacacgctg ccgtcggtag ccaccctggc gcatgtcgcg
      121 cagggattcg cccgctgcaa cgacccggcg gaagaggccc gccgtttcta tttccgctac
      181 gatcatcgca ccggagagct gctcacccac ggcgccatcc ccgacgccgc ccgccgcgcg
      241 gaactgatcg actcgctgta tccccttctc gaactgcccc cgatggacct gttcaccatc
      301 ggcgccggac cgtcgaatcc cggcaagcgc cgggtgatcc tcgccgggca caagctcggg
      361 gccgatggcc gggctgtggc gacctacggt ctcgaaacct gcatgcgggt gctgggccgc
      421 gatgcctttc cccgggtgtt cgagaactac ccgctcctcc ccccggccct ggtcgggaac
      481 cttccgaacg attcgatagt ctccattacg gtgacccggg gctacgacgg aaccgcgccg
      541 ggagaaaccc tgtatgtctc gccggtgtcc tatccggaga cctatcgcgc gcgggtggtg
      601 gagcggccgg acaatatcac gctccgcttc gaagcccatc tccgtccctc gctggcgaca
      661 cagctggtgc cgagccggcc ccgcgggttc cgggtgctgt ggctcctggc cctgctcggc
      721 gccaccctcg cgctcgcggc ggtggtggtc gcccagatca ggcgggagca gcaactggtg
      781 cgggcacgga gcgacttcgt gtcgtcggtg tcgcacgaac tccggacccc gctggcccag
      841 atccggctct ttgccgagag cctcaagctt ggttcggtgc gctcggagcg ggaccgtggc
      901 gcggcggtgg aagtgatcct ccaggaatcc cagcggctga tgcacctggt ggacaatgtg
      961 ctgcacttct cccgtccgaa cggccggggg cgcacgccgt tcccggagcg ggtcaacctc
     1021 tcggagctgg cggcggatgt cgtgcatggc ttcgagccgc tggccaaggg ccgggggatc
     1081 cgcttccggg tcgatgccca gccgcgggtg gaggtgcagg tggagccggg tccgacgcgg
     1141 cagatcctgc tcaacctgct cgacaacgcg gtgaagttca gtccgccgga cctggccgtg
     1201 acggtgcgcg tctggaccga ggatggctgg gcctgtctct cggtcgcgga ccaggggccc
     1261 ggcatcccgc cggcggaccg cgacctgatc tggaagccgt tcgtgcggct ccgcgccaat
     1321 ccgagccgcg cgcccggcag cgggatcggc ctcgccgtgg tgcgcgatct cgcggaccgc
     1381 atggatgggc aggtgcaggt ggacgacgcg cctggcggcg gcacagtgtt cacggtgcgc
     1441 ttccccgcgt ttcgcgttgc actcgcggtt gcaacgccgt gaacgtgtgt ctcgaccgtt
     1501 gcttgaacgt ccctgatgct gtgggcggcc gcacgcgccc gcgcgggtcc agatcgaggc
     1561 tgtggagccc gcgtcttccg aaaccgaatc accgctcgcc cgtcgtgacg ggcaagcctg
     1621 cgaaccgaaa cgtcacatca tgcagcgcat tctcgtggtc gaggacaacg ccaatctcgc
     1681 gctcgggctc cggatgaacc tggagcacgg cggtttcagc accgatctcg ccatctcggg
     1741 cgaagacggg ctcaagcggg tgcgcgagtc gcggttcgac ctcatgatcc tcgacatgat
     1801 gctgccgggc gggctcgacg ggttccaggt gctggaacgt cttcggagcg ggggacgtac
     1861 cctgcccgtg atcgtggtga ccgcgcggac cgaagaggct gacaagctcc gcggtttcca
     1921 gctcggcgcc gacgattacg tgacgaagcc cttcgggatt ctcgagctga tcgcccgggt
     1981 gcacgcggtg ctgcgccggg tgacgcgggg gagtgaagag gcgccggccg agacggcgcc
     2041 gctggtcggc ggcgacatcg aactctcgcc gctcaaccgg acggtcaccc gcggcggcga
     2101 gcgggtgcat ctgcggccca aggagttcga cctgctgcac cgcctgatga gcgcgcccgg
     2161 ccaggtgctg gcgcgccgca agctgctgca ggaggtctgg ggctatcagc cgggcgtcta
     2221 cagccgcaca ctcgatgtgc atgtggccga tctccgccgg aagctggagg acaaccccga
     2281 gaacccgcgg cacctcgtga cggtgcattc gatcgggtac cggtttgacc cgtaggccgt
     2341 aggccgtagg ccgttggcct ttggccatta gccgttagcc attagccatt agccattagc
     2401 cgttagccgt tagccagtcg gtaattgccc cgggccaggt acgcctgggg ttttgattgt
     2461 taggagatat tggcaca
//
LOCUS       DATIFF010000424         5694 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1440228, whole genome shotgun sequence.
ACCESSION   DATIFF010000424 DATIFF010000000
VERSION     DATIFF010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5694
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1440228"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..376)
                     /gene="lexA"
                     /locus_tag="VLD58_06435"
     CDS             complement(<1..376)
                     /gene="lexA"
                     /locus_tag="VLD58_06435"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: protein motif:HMM:NF013855.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HSB53972.1"
                     /translation="MPLTKRQSEILKYLQEHIRDRGYAPSFEEIAEHFSFQSLATVHE
                     HLTNLERKGYIHRTHNESRAIEVLPPKGQAGATEIPLLGKVAAGLPIEALMHQESLSV
                     PDEMLPRRGGPNYALRVVGDSMI"
     gene            442..1230
                     /gene="trpC"
                     /locus_tag="VLD58_06440"
     CDS             442..1230
                     /gene="trpC"
                     /locus_tag="VLD58_06440"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: protein motif:HMM:NF001377.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HSB53973.1"
                     /translation="MPTTLERILATTAATLPPLRARRSEIEAKALGTPSPPAFLGRWD
                     RKRVALIAEVKRRSPSAGDISTDLDPTIHAARYARSGAAAVSVLTDGPYFGGSLEDLQ
                     AVSVTAGIPTLRKDFILDEVQIAEARAAGASAVLLIVRALTPVRLRELLGHTRALGLE
                     ALVEAHDRRELDTALQAGVGIVGINSRNLDDFRIDIDAAWELMAGIPKDVVAIAESGM
                     ATRADVARAAQAGADGVLIGTALSSSPDPSALVQEVTLVGRRGR"
     gene            1304..1939
                     /locus_tag="VLD58_06445"
     CDS             1304..1939
                     /locus_tag="VLD58_06445"
                     /inference="COORDINATES: protein motif:HMM:NF012900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HSB53974.1"
                     /translation="MPIPAKICGLTRGEDAEAALRFGASYLGMIFAGGPRQVTLAQAR
                     QVVQAAAGQVPVFGVFSSQTREEILEIRDVTGLDGAQLHQEPSPALVEALLAEGVRVL
                     VVARLSSIEELARLDPLLPLGIPLLVEPKVAGKLGGTGVALSHDLARQARSHLTGHTM
                     FLAGGLTPDSVADAVRAARPDAVDVSSGVEQIPGIKDHDRLARFLEVLRWL"
     gene            1930..3132
                     /gene="trpB"
                     /locus_tag="VLD58_06450"
     CDS             1930..3132
                     /gene="trpB"
                     /locus_tag="VLD58_06450"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HSB53975.1"
                     /translation="MAVTLPRERSVGGRFGAYGGRYVPETLVAALDQLAALYDAARSD
                     QGFWAEYELLLKEFVGRPSLLSPAPRFSELVGTEVLLKREDLNHTGAHKINNTIGQVL
                     LAQRMGKRRIIAETGAGQHGVATATVCARFGLECVVYMGAEDVERQALNVYRMKLLGA
                     TVVPVLSGTRTLKDATNEALRDWVTNVPTTHYIIGSVVGPDPFPRMVRDFQSVIGREA
                     RRQVLERTGRLPRTVVACVGGGSNAIGMFAGFIDDPEVELVGVEAAGEGIATGHHSAT
                     LSAGSPGVLHGCLSYLLQDADGQVLPAHSVSAGLDYPGVGPEHSWLRDTGRVRYEAVT
                     DAEALEAFQSFCRLEGIIPALETAHAIAWIARNRGRWSAGQTVLLCLSGRGDKDVAHV
                     AKLLGTSE"
     gene            3129..4832
                     /locus_tag="VLD58_06455"
     CDS             3129..4832
                     /locus_tag="VLD58_06455"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSB53976.1"
                     /translation="MTQGIPAPVVLPTREVEELLRTLVKGLRAFQMYLPNNPIYQRAV
                     QAVRGAFVPIWASGLTSLVLQIVETDILWEEQTVYHQPNKSDSLAWGLFKDGMRVLTL
                     FPGVEEDEIIRFLEIVQKARTLATDAGDDLLTLLWEQDFSLVQYHFTEFIPDAGVPGL
                     SGEGVYSQTVTDPNALAEENRGKVAEEAPPKKSGVVDVEDFDSTLYWLEEAEVRAIAE
                     DIEREYKQDLRNNVLNIVFDILEQRNEDWARAEVLGTLESYLPHVLNAGDFKTVAQIL
                     RETRLLVRKPDLLTPNQRDRLDSLTGRLSDPNVLQQILTSVTEAQLPPSAEHLGEVFR
                     ELRPAALETSLVWLPKVPVNAPIHELLSSAADRLAETSPQEVLRLLRLPQSEALPAVI
                     ALCGRLKVQGAVPGLADTLSHESPQVRAAAVQSLDAIGTPAALSALERAVDDTDREVR
                     IAAVTALGRRGYKAVLKRIEPVIQGKATREIDLTERMRFFEAYAMISGATALETLSAL
                     LTPGSLFRRKESAEVRACAALALGRLRSPEARDVLQKHRDDKELIVRNAVSKALREGG
                     A"
     gene            4829..>5694
                     /locus_tag="VLD58_06460"
     CDS             4829..>5694
                     /locus_tag="VLD58_06460"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HSB53977.1"
                     /translation="MNRESDGHGGEERVAGDAFLRTAGRTFLLAMYAAFRSLKLYPIE
                     NATAQKSLDELQAAAIAILTPLNEIELRLSGDFIFVNGTRLRLELDNYASFSNLLQIL
                     TASGVGELKVAAGVERREWQILLGVLLGVSAKAGEADPHERLLDLRDKLAVANVTHLD
                     VEPPLESEDKVAEAERAREQAKRTYSHGVAVTKDLINSVRLGRTTSVAKVKRAVQAIV
                     DQVLNNETSLIGLTTIRDYDEYTFTHSVNVCILAVAIGKKLALTRLQLYDLGLAALLH
                     DVGKARIPVEVL"
BASE COUNT          913 a         2008 c         1879 g          894 t
ORIGIN      
        1 cgatcatcga gtcccccacc acgcggaggg cgtagttggg cccgccccgg cgcggcagca
       61 tctcgtcggg aaccgagagc gactcctggt gcatcagggc ctcgatcggg aggccggcgg
      121 cgaccttgcc cagcagcgga atctccgtgg caccggcctg acccttggga gggagcacct
      181 cgatggcgcg gctctcattg tgggtccgat ggatgtagcc cttccgctcg aggttggtca
      241 ggtgctcatg caccgtggcc agcgactgaa agctgaagtg ctccgcgatc tcctcgaagc
      301 ttggcgcata cccccggtcg cgaatatgct cctgcaggta tttgaggatc tcactctggc
      361 gcttggtcag cggcattggc tctcccggtg gtaaccgaat gtactccgaa caaagtaccc
      421 gaatagtgac cgaagagcaa gatgcccacc acacttgagc gcatcctcgc gacaacagcg
      481 gccactcttc ccccgctacg agcccgaaga agcgaaatcg aggccaaagc cctcgggacc
      541 ccttcgcccc cggctttcct cggtcgttgg gaccggaaac gcgtcgccct gatagccgag
      601 gtgaagcgcc ggtccccctc tgccggggac atcagcaccg acctggaccc caccatccac
      661 gccgcccgct atgcccgctc cggcgccgcc gccgtctccg tcctgaccga cggcccctac
      721 ttcggagggt ccctcgagga cctccaggcg gtgagcgtca cagctggaat ccccacgctg
      781 cgcaaggatt tcatcctcga cgaagtccag atcgccgagg cccgggccgc tggtgcgtcc
      841 gcggtactcc tgatcgtgcg ggccctgact ccggtccgtc tccgtgagct cctcggccac
      901 acccgcgccc tcggtctcga ggccctggtc gaagcccacg accgccgcga gctcgacacg
      961 gccctgcagg ctggggtggg gatcgtcggc atcaacagcc ggaacctcga tgatttccgg
     1021 atcgatatcg acgcggcgtg ggagctcatg gcaggaatac cgaaggacgt ggttgccatc
     1081 gccgagagcg gcatggccac ccgagccgat gtcgcgcgcg ccgctcaggc cggcgccgac
     1141 ggtgtcttga ttggcacggc cctcagctcg tcgcccgatc cttcggcgct ggtgcaggaa
     1201 gtcaccctgg tcgggcggcg cggtcgttag gcgagacccg agaccaccag acctctagac
     1261 cccagaccct agaccctaga cccgagaccc gagacccaac ccgatgccca tccccgccaa
     1321 gatctgcggc ctgacccggg gcgaggacgc cgaggccgcg cttcgcttcg gggccagcta
     1381 cctggggatg atcttcgcgg gcgggccccg gcaggtcacc ctggcccagg cccggcaagt
     1441 ggtccaggca gccgcggggc aagttcctgt ctttggggtc tttagctcgc agacccgcga
     1501 ggagatatta gagatacgcg atgtcaccgg gctcgatgga gcccagctgc accaggagcc
     1561 ctcgcccgcg ctggtcgagg cgctccttgc cgagggggtc cgggtgctgg tggtcgcccg
     1621 gctttcctct atcgaagagc tggcccggct cgatccgctg cttccgctcg gcattccgtt
     1681 gctggtggag ccgaaggtcg ccgggaaact gggcggcacc ggtgtcgcgc tgtctcatga
     1741 cctcgcacgg caggcccgct ctcacctgac tggtcacacg atgttcctgg ccggcggtct
     1801 cacgcccgat tcggtggccg acgcggtacg tgcggcgcgt cccgatgcgg tagacgtatc
     1861 ctccggggtc gagcagattc ccggcatcaa ggaccacgac cggctcgcac gttttctgga
     1921 ggttctccgg tggctgtgac cctcccacgc gagcggtccg tcggcgggcg ctttggcgcc
     1981 tatggcggac gctacgttcc cgaaaccctc gtcgccgcgc tcgatcagct cgcggcgttg
     2041 tatgacgcgg cccgttctga ccagggcttc tgggccgaat acgaactcct cctcaaggaa
     2101 ttcgtcggcc gcccctcgct gctctcgccc gcgccgaggt tctccgagct ggtcggcacc
     2161 gaggtgctgc tcaagcgcga agatctgaac cacaccggcg cccacaagat caacaacacc
     2221 atcggccagg tgctcctcgc ccagcgcatg ggcaagcggc gcatcatcgc ggagaccggg
     2281 gcgggccagc acggagtggc caccgccacc gtctgcgccc gcttcgggct cgagtgtgtg
     2341 gtgtacatgg gcgccgaaga cgtcgaacga caggccctca acgtctaccg gatgaagctc
     2401 ctcggcgcca ccgtggtgcc cgtgctctcc gggacccgca ccctcaagga cgccaccaac
     2461 gaggcgctcc gggactgggt caccaatgtc cccaccaccc actacatcat cggctcggtg
     2521 gtcggccccg atcccttccc gcgcatggtc cgcgacttcc agtcggtgat cgggcgggag
     2581 gcgcggcgcc aggtcctgga gcggaccggg cgcctgccgc gcaccgtggt agcctgcgtc
     2641 ggtggcggct ccaacgccat cgggatgttc gccggcttca tcgatgatcc cgaggtggag
     2701 ctggtcggtg tcgaggcggc aggcgaaggg atcgccaccg gccatcacag tgcgacgctt
     2761 tccgccggct cccccggtgt gctccacggc tgtctcagct acctgctcca ggacgccgac
     2821 ggccaggtgc tgccggccca ctcggtctct gccggcctcg actatcccgg ggtcggcccg
     2881 gagcacagct ggctgcggga caccggccgg gtccgctatg aggcggtgac cgacgccgag
     2941 gcgctggagg ccttccagtc gttctgccgg ctcgagggga tcatcccggc gctggagacg
     3001 gcgcacgcca tcgcctggat cgcccggaac cggggccgct ggtcggcggg gcagacggtg
     3061 ctcctctgcc tcagcgggcg gggcgacaag gacgtggcgc acgtcgccaa actgctcgga
     3121 acgagcgagt gacccagggc attcccgcgc ccgtcgtgct gccgacccga gaggtcgagg
     3181 agctgctgcg gaccctggtc aaagggctcc gcgccttcca gatgtacctc ccgaacaacc
     3241 cgatctacca gcgggcggta caggcggtgc gcggcgcgtt tgtcccgatc tgggccagcg
     3301 gtctcaccag cctggtgctc cagatcgtgg agaccgacat cctctgggaa gagcagacgg
     3361 tctaccacca gcccaacaag tccgacagcc tcgcgtgggg cctcttcaag gacggcatgc
     3421 gggtcctcac cctctttccc ggggtggaag aagacgaaat catcaggttt ctcgagatcg
     3481 tccagaaggc ccgcaccctc gccaccgacg ccggtgacga cctgctgacc ctgctctggg
     3541 aacaggactt ctcgctggtg cagtaccact tcaccgagtt catccccgat gccggtgtgc
     3601 cgggcctctc gggcgaaggg gtctacagcc agaccgttac cgatcccaac gccctcgccg
     3661 aagagaatcg cggcaaggtg gcggaagagg cgccgcccaa gaagagcggg gtggtggatg
     3721 tcgaggattt cgactcgacc ctgtactggc tggaggaagc cgaggtccgt gcgatcgccg
     3781 aagacatcga gcgggagtac aagcaggacc tccgcaacaa cgtcctcaat atcgtcttcg
     3841 atatcctcga gcagcggaac gaggactggg cccgggccga ggtgctgggg acgctcgaga
     3901 gctacctccc gcacgtgctc aacgcgggcg acttcaagac cgtcgcccag atcctccgcg
     3961 agacccggct gctggtgcgg aagcccgacc tgctcacgcc caaccagcgc gaccggctcg
     4021 actccctgac cggccggctg tccgatccca atgtgctgca gcagatcctc acctcggtca
     4081 ccgaggccca gcttccgccc agcgccgagc atctgggtga ggtgttccgc gagctgcgtc
     4141 cggccgcgct ggagacatcc ctcgtctggc tgccgaaggt gccggtgaac gcgccgatcc
     4201 acgagctgct ttcttccgcc gcagaccggc tcgccgagac cagcccccag gaagtgctgc
     4261 ggctcctccg gctgccgcag tcggaggcgc tccccgcggt catcgcgctg tgcggccgcc
     4321 tcaaggtgca gggcgccgtg cccggcctgg cggacacgct gagtcacgag tcgccccagg
     4381 tccgcgccgc cgcggtgcag tcgctcgacg cgatcggcac ccccgccgcg ctctcggcgc
     4441 tcgagcgggc ggtcgacgat accgaccgcg aggtccggat cgccgccgtc accgcgctcg
     4501 gacgacgggg gtacaaggcg gtgctcaagc ggatcgagcc ggtgatccag ggcaaggcga
     4561 cccgcgagat cgacctgacg gaacggatgc ggttcttcga ggcctacgcc atgatctcgg
     4621 gcgcgaccgc gctggagact ttgtcggctc tcctcacgcc cggcagtctc ttccggcgca
     4681 aggagtcggc cgaggtgcgg gcctgtgccg cgctggcgct gggccggctc cggagtcccg
     4741 aagcccgcga cgtcctccag aagcatcgcg acgacaagga gctcatcgtg cggaacgcgg
     4801 tgagcaaggc gctccgggaa ggcggcgcat gaaccgcgaa tccgacggcc acggcggcga
     4861 ggagcgggtc gcgggcgatg ccttcctgcg caccgccggc cgcaccttcc tgctcgcgat
     4921 gtacgccgcg ttccggagcc tcaagctcta cccgatcgag aacgccaccg cccagaagtc
     4981 gctcgatgag ctccaggcgg cggcgatcgc catcctgacg ccgctcaacg agatcgagct
     5041 gcgcctctcg ggcgacttca tcttcgtcaa cgggacccgg ctccgcctgg agctcgacaa
     5101 ctacgcctcg ttctccaacc tgctccagat cctcaccgcc tcgggggtgg gtgagctcaa
     5161 ggtggcggcc ggggtcgagc gccgcgaatg gcagatcctg ctgggcgtgc tgctcggtgt
     5221 gtcggccaag gcgggggagg ccgatcccca cgagcggctg ctcgatctcc gcgacaagct
     5281 ggcggtggcg aacgtgaccc acctcgacgt ggagccgccc ctcgagtcgg aagacaaggt
     5341 ggccgaggcg gagcgggccc gggagcaggc caagcggacc tattcccacg gcgtggcggt
     5401 gaccaaggac ctgatcaaca gcgtccggct gggccgcacc acctcggtgg ccaaggtgaa
     5461 gcgcgccgtg caggcgatcg tcgaccaggt cctcaacaac gagacctcgc tgatcggcct
     5521 gacgaccatc cgggactatg acgagtacac cttcacccat tcggtgaatg tgtgtattct
     5581 ggcggtagcc atcggcaaga agctcgcgct cacccggctc cagctgtatg acctggggct
     5641 cgccgcgctg ctccacgacg tgggcaaggc gcggattccg gtcgaggtgc tgaa
//
LOCUS       DATIFF010000425         1203 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1902111, whole genome shotgun sequence.
ACCESSION   DATIFF010000425 DATIFF010000000
VERSION     DATIFF010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1902111"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..594)
                     /locus_tag="VLD58_06465"
     CDS             complement(43..594)
                     /locus_tag="VLD58_06465"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HSB53978.1"
                     /translation="MPLALPRYTLRDLESFPDDGCRYELLDGVLLVTPAPAPLHQLVA
                     LRISTTLATYLGPRGPGRVFSPGSVELEPNLHLEPDVLVVPAGALQPGLREETRWTDI
                     RRWWLAVEVSGKGSTPYDRDSKGPAYLALGVPEVWRVDLRDRCVFVSRTGTTEVRHDD
                     HVTWLAPGMSEPMVLPVADLFLP"
     gene            complement(706..>1203)
                     /locus_tag="VLD58_06470"
     CDS             complement(706..>1203)
                     /locus_tag="VLD58_06470"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HSB53979.1"
                     /translation="PAYHRQTTGPEILRDFADRRLDYFVTGYGTGGTLTGAGQVLKTA
                     RPGIRIIVAEPEQAALLGGKPWQPHKIQGWTPDFVPQVLDRGIIDQVITVTDAEAVEC
                     ARKLAAKEGIFCGISSGGTFATALKVAAEAKEGSHILAMLPDTGERYLSTVLFEGIPE
                     GTDAV"
BASE COUNT          199 a          406 c          429 g          169 t
ORIGIN      
        1 aagtagggcc ggcgcgcacg ccggctcagg aagcgctgcc ggtcagggaa ggaagagatc
       61 cgccaccgga aggaccatcg gctcgctcat ccccggggcg agccaggtca cgtggtcgtc
      121 gtggcggact tcagtcgttc cggtgcggga gacgaagacg caacgatcac gcaaatccac
      181 ccgccagacc tccggaaccc cgagggcgag ataggccggg cccttggaat cgcggtcgta
      241 cggagtggat ccctttcccg agacctcgac cgcgagccac cagcggcgga tgtcggtcca
      301 gcgagtctcc tcgcggagcc ccggttgcag tgccccagcg ggtaccacga gcacgtcggg
      361 ctcgagatgc aggttgggct cgagctccac cgagcccggg gagaagaccc gccccggacc
      421 ccgcgggccc aggtatgtcg cgagggtggt cgagatccgg agggcgacga gctggtgcag
      481 cggcgccgga gccggggtca ccagcaggac cccgtccagc agctcgtagc ggcacccgtc
      541 gtccgggaac gactcgagat cgcggagggt gtagcgcggg agagccagtg gcatggccat
      601 aaggtatgga ctcggcgcgg agggacgcaa ttcggcatgc cccacgatgg gataacaggg
      661 ggtcaggccg agcacctttt tcacgcaggc cgggcggaac ggccgctaca ccgcgtcggt
      721 cccctccgga atcccctcga agagcaccgt gctgaggtag cgctcgccgg tatccggcag
      781 catcgcgagg atgtggctcc cctccttcgc ctcggccgcc accttgagcg ccgtggcgaa
      841 ggtcccgccc gacgagatgc cgcagaagat cccctccttc gccgcgagtt tccgcgcgca
      901 ctccaccgcc tcggcgtcag tgacggtgat cacctggtcg atgatgccgc ggtccagcac
      961 ctgcgggacg aagtcagggg tccatccctg gatcttgtgc ggctgccacg gcttcccgcc
     1021 cagcaacgca gcctgctccg gctcggccac gatgatccgg atgccggggc gcgccgtctt
     1081 gagcacctgg cccgcgccgg tgagggtgcc gccggtgcca tacccggtca cgaagtagtc
     1141 gagccgccgg tcggcgaagt cgcgcaggat ttcgggaccg gtggtctggc ggtgataggc
     1201 ggg
//
LOCUS       DATIFF010000426         2382 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_363422, whole genome shotgun sequence.
ACCESSION   DATIFF010000426 DATIFF010000000
VERSION     DATIFF010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2382
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_363422"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..506)
                     /locus_tag="VLD58_06475"
     CDS             complement(<1..506)
                     /locus_tag="VLD58_06475"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HSB53980.1"
                     /translation="MRQRWGLIALVAVISFFTGGWLLQRGTSADGNVYQQARLFDDVL
                     SHISAYYVDSIPQTDLYQKATTGLLEQLKDPYSVLLVDDDYKALTETTTGNYGGLGIQ
                     IDVRDGWITVVAPLPDTPAERAGVETGDQIIAVDSKSTEGWNNDQAVKALRGAPGSDV
                     QLKVRRTG"
     gene            complement(570..1208)
                     /gene="tmk"
                     /locus_tag="VLD58_06480"
     CDS             complement(570..1208)
                     /gene="tmk"
                     /locus_tag="VLD58_06480"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: protein motif:HMM:NF014299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HSB53981.1"
                     /translation="MSRGFFLVVEGTEGAGKTTLARALAGRLSGAGIEPVLVREPGGT
                     PVAERIRAILLDPEHPIEPVSELMLFLAARADLVARVIGPALAAGRTVLADRFQLSTE
                     AYQCGGRGLPTSLFQDANRAATGGLTPDLTLVLDIPTGVGFQRIAAKGERLDRIEQAG
                     PEFHARVAEVFRRAKGPGILHLDAALPPEQVLRTAWEEIMKNHPGARRAGHH"
     gene            complement(1205..1558)
                     /locus_tag="VLD58_06485"
     CDS             complement(1205..1558)
                     /locus_tag="VLD58_06485"
                     /inference="COORDINATES: protein motif:HMM:NF017902.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF family regulator"
                     /protein_id="HSB53982.1"
                     /translation="MIWDKAEDLGRMIGQTPEYKALRRAETALREDADAQAKVDLIQK
                     LARQMDELVAQGQMPDQATAETYEQAVRELEVSPSGQAYAVARANFEKVMIKVNQLIA
                     QGMEKGATSNIITLG"
     gene            complement(1555..>2382)
                     /gene="prmC"
                     /locus_tag="VLD58_06490"
     CDS             complement(1555..>2382)
                     /gene="prmC"
                     /locus_tag="VLD58_06490"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: protein motif:HMM:TIGR03534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HSB53983.1"
                     /translation="TLLDAAATRLRAAGIEDPRREARRIWNDLEELAGRSPDPDREAE
                     PVPAAAAAFQAAVERRADGEPLAYVTGLAGFRRLTLLVDRRVLIPRPETEGLVELVLA
                     RCSTGRVADVGTGSGCIALALADEGRFTLVAGIDRSPHALEVARANRRRTGTPIALVQ
                     GDLLEAVATGSLDAVVSNPPYLTEREYRGLDASVREWEPREALASGEDGMGATVQVIL
                     DARRVTRRGGWLALEVDASRAPAVAEAATAAGWSEVTVHMDLFDRARFVLARRSEAE"
BASE COUNT          341 a          893 c          757 g          391 t
ORIGIN      
        1 atgccggtcc ggcgcacctt gagctggaca tcgctgccgg gcgcgccgcg cagagccttc
       61 acggcctggt cgttgttcca cccttcggtg gacttgctgt cgaccgcgat gatctggtcg
      121 cccgtctcga caccggcccg ctcggccggc gtgtcgggga gcggagccac gaccgtgatc
      181 cagccgtcgc gcacgtcgat ctggatcccc agcccgccgt agttgccggt agtcgtttcg
      241 gtcagcgcct tgtagtcgtc atccaccagc aggaccgagt agggatcctt gagctgctcg
      301 aggagtcccg tagtggcctt ctggtagaga tcagtctggg gaatggaatc gacgtaatag
      361 gcgctgatgt gcgagagcac atcgtcgaac aaccgcgcct gctgatacac attcccgtcg
      421 gccgacgtgc cgcgctggag cagccagcct cccgtgaaga acgagatgac cgctaccagg
      481 gcaatcaacc cccaccgctg tcgcatgcga atcctccagt gacctgcgcc gggatcccag
      541 tgggggagtc ccggcgcgcc tgcttcaagc taatgatgac cggcgcgtcg cgcgccggga
      601 tggttcttca tgatctcctc ccatgccgtc cgcaagacct gttccggcgg gagggcggcg
      661 tccaggtgga ggatcccggg gcccttcgcc cggcggaata cctccgccac ccgggcgtgg
      721 aactcggggc cggcctgctc gatccggtcc agccgctccc ctttggcagc gatgcgctga
      781 aatccgactc cggtaggaat gtccaggacc agggtcaggt cgggcgtcag gccgccggtt
      841 gcggcccggt tggcatcctg aaagagtgac gtcgggaggc cccgcccacc acactggtag
      901 gcttcggtcg aaagctggaa gcggtcggcc aggaccgtcc ggcctgccgc cagcgccggc
      961 ccgatgactc gcgccaccag gtcggcgcgg gcggcgagga agagcatcag ttcactcacc
     1021 ggttcgatcg ggtgctccgg gtcgagcagg atcgcccgga tccgctcggc caccggggtg
     1081 ccccccggct cccgcaccag cacgggttcg atcccggcgc cgctcaaccg cccggccagc
     1141 gcccgcgcga gggtggtctt ccccgccccc tccgttcctt ccaccacgag gaagaaaccg
     1201 cggctcatcc cagtgtgatg atgttgctcg ttgcgccctt ctccatcccc tgggcgatca
     1261 actgattcac cttgatcatg accttctcga agttggcccg ggccaccgcg taggcctgac
     1321 ccgacggact cacctcgagc tcgcgcaccg cctgctcgta ggtctcggcg gtcgcctggt
     1381 ccggcatctg gccctgcgcc accagctcgt ccatctggcg cgccagcttc tggatcaggt
     1441 ccaccttggc ctgcgcgtcc gcgtcttccc ggagcgcggt ctccgcccgc cggagcgcct
     1501 tgtattccgg cgtctggcca atcatccgcc cgagatcttc cgccttgtcc cagatcactc
     1561 cgcctcgctc ctccgcgcga gcacgaaccg cgcgcggtcg aaaaggtcca tgtgtacggt
     1621 cacctcactc catccggccg ccgtcgccgc ctcggcaact gccggcgccc ggctggcatc
     1681 cacttcaagc gccagccatc cgccccgccg tgttacccgc ctggcgtcca ggatcacctg
     1741 gacggtggcc cccatcccgt cctcgccgct cgccagcgcc tcgcggggct cccactcccg
     1801 taccgaggca tcgagtccgc ggtactcacg ctccgtaaga tagggcgggt tcgacaccac
     1861 cgcgtccagg cttccggtgg cgactgcctc gagcaggtcg ccctgcacca gcgctatcgg
     1921 cgtcccggtc cgtcgccgat tcgcccgggc aacctccagc gcgtggggtg accggtcaat
     1981 cccggccacc agcgtgaagc gcccctcatc cgcgagggcc agggcgatgc acccgctccc
     2041 ggtgccgacg tcggctactc ggccggtcga acagcgcgcc agcaccagct cgaccagtcc
     2101 ttccgtctcg gggcgaggaa tcaggacccg gcggtcgacc agcagggtca ggcgccggaa
     2161 gccggcgaga cccgtcacgt acgcgagcgg ctccccgtca gcccggcgct ccactgcggc
     2221 ctggaacgct gcggccgccg cagggactgg ctctgcttcc cgatccgggt cgggagaacg
     2281 gcccgcaagc tcctcgaggt cattccagat ccggcgggct tcccggcgcg gatcctcgat
     2341 gcctgccgca cggagacggg tggccgccgc gtcgagcagc gt
//
LOCUS       DATIFF010000427         1054 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_56456, whole genome shotgun sequence.
ACCESSION   DATIFF010000427 DATIFF010000000
VERSION     DATIFF010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56456"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1054
                     /locus_tag="VLD58_06495"
     CDS             <1..>1054
                     /locus_tag="VLD58_06495"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSB53984.1"
                     /translation="LRALRPLISITVQGPALADSLEWLAREKVDRMERVIEARRTRGF
                     DAARILVADGRGRLLMDHIRTIVALVDAVAQRELVAARDQAADQRRTALLGLLASGLA
                     SIGLAVVAGFLISRDISADRAQREQLRSQGDQLTSQLAGVSASLATQDAQLRAIIAAV
                     PVALVTIDRESRVTFWSPGAEKLFGWTSEEALGQMLPNVSLDRLEEHRRFRDSVLEGN
                     AFSGRETRRRTKDGTEIDVAVSTAPLLNNQGETVGLVAAYVDVSDQRLLQEELRQSQK
                     MEAVGRLAGAVAHDFNNLLTAILGFAERARRASPASGQHQSDLDQVVAAAERAAGLTH
                     QLLTFSRPQAVTPKVID"
BASE COUNT          160 a          386 c          360 g          148 t
ORIGIN      
        1 ctgcgggcgc tgcgccccct gatctcgatc acggtccagg gcccggcgct cgccgacagt
       61 ctcgagtggc tggcgagaga gaaggtcgac cggatggagc gggtcatcga ggcacgccgc
      121 accaggggct tcgacgccgc ccgcatcttg gtggccgacg gccgcggccg cctcctcatg
      181 gaccacattc gcaccatcgt ggcgctggtc gacgccgtgg cgcagcgcga actggtggcc
      241 gcgcgcgatc aggcagcgga ccagcgtcgc accgcgctcc tcggactgct cgcgtccggc
      301 ctggcgtcca tcgggctcgc ggtggtcgcc ggcttcctca tcagccgcga catctctgcc
      361 gaccgggccc agcgggagca gctccgctcc cagggcgacc agctcaccag ccagctcgcc
      421 ggcgtatcgg cctcgctggc cacgcaggat gcgcagcttc gcgccatcat cgccgcggtc
      481 ccggtcgccc tggtcacgat cgaccgtgag agccgggtga ccttctggag cccgggggca
      541 gagaagctct tcggctggac cagcgaggag gccctggggc agatgctccc caacgtttct
      601 ctcgaccgcc tggaagaaca tcgccgcttc cgcgactcgg tcctcgaggg caatgcgttt
      661 tccggccggg aaacccgacg ccggacaaag gacgggaccg agatcgacgt ggcggtctcc
      721 accgcgccgc tcctcaacaa ccagggggaa acggtgggcc tggtggccgc gtacgtcgac
      781 gtgagcgacc agcggctgct gcaggaggaa ctccggcaat cccagaagat ggaggcggtc
      841 ggccgcctcg ccggcgcggt cgcgcacgac ttcaacaacc ttctgacggc cattctgggg
      901 ttcgcggaac gggccaggcg tgcctcgcct gcctcgggtc agcaccagag cgacctcgac
      961 caggtcgtcg cggccgcgga acgggccgcc ggcctcaccc accagctcct caccttcagc
     1021 cggccccagg ccgtgacgcc gaaggtgatc gatg
//
LOCUS       DATIFF010000428         1958 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2209473, whole genome shotgun sequence.
ACCESSION   DATIFF010000428 DATIFF010000000
VERSION     DATIFF010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1958
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2209473"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1194)
                     /locus_tag="VLD58_06500"
     CDS             complement(<1..1194)
                     /locus_tag="VLD58_06500"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSB53985.1"
                     /translation="MATTSSEPEAPDAAALLTERYARLLAWSGPLLALATALNDPRWM
                     HQPILLAVLVAGIVVLRAAPIRLSKFSYLTQTGIPALIAALVAAPATGVLAIVAGVFL
                     SDFAWLRKTLFASLVNAGREALGFVVAFGFYAAALRVSGIQAISLEFLAPAVVLASGY
                     FAFTRVLFYLSLLLRGKLQVEERVFILRWEVVSFLVTLLGTVVIVWGLTQLDPPGWAV
                     VILALASSGLVARALLEEAISAEDLSRFHVLQGALASSLGLTQSFEQIEQLAYRLLDW
                     GDLRIYRIGPGGLALAYRAEFGRPARGDPDPGLAAVRERVVAEGEPVVVDDVRGAGLL
                     RRDDPAVRSFMCYPLRQGTRSIGTVEIEHYKAGHYRVRDRSALATVAAQLSAAIHVAE
                     LRRPLF"
     gene            complement(1175..>1958)
                     /locus_tag="VLD58_06505"
     CDS             complement(1175..>1958)
                     /locus_tag="VLD58_06505"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HSB53986.1"
                     /translation="TLRDYDEYTFTHSVNVCIFSVALGRKIGLGKLQLYDLGMTSLLH
                     DIGKAKIPIELLNKTSGLAEEEWREIQAHPWRGAMTLFGLRAYDEIPYKAILVAHEHH
                     MKTDLTGYPRCIRPRTLGIYSRLVAVADGFDAATTRRAYQTVPIEPDQVLREMWTNPR
                     RGYDPIIVKALINLIGIYPIGTCVILDTFEVGIVAQANPDRDSLNRPLVRIAIDPSGT
                     VVPAPGIPADLSERGPDGNFIRSIVKVTNPDRYNLTVGDYFL"
BASE COUNT          333 a          637 c          719 g          269 t
ORIGIN      
        1 gaagaggggg cggcggagct cggccacgtg gatcgccgcg gagagctgcg ccgccacggt
       61 cgccagggcg gagcggtcgc ggacccggta gtggccggcc ttgtagtgct cgatctcgac
      121 ggtgccgatg ctccgggtgc cctggcggag cgggtagcac atgaagctgc gcaccgcggg
      181 atcgtcccgc cggagaaggc ccgcgccgcg cacgtcgtcc acgaccacgg gttccccctc
      241 cgccaccacg cgctcccgaa cggcggccag tcccgggtcg gggtcgccgc gggccggacg
      301 tccgaattcg gcccggtagg cgagggcgag cccccccgga ccgatccggt agatgcggag
      361 gtccccccag tcgagcaggc gataggcgag ctgctcgatc tgctcgaacg actgggtgag
      421 cccgaggctg cttgccagcg cgccctgcag cacgtggaat cggctgaggt cctcggccga
      481 gatcgcctcc tcgaggaggg cccgggccac gagcccggag gaggccagcg cgaggatcac
      541 caccgcccac cccgggggat cgagctgggt gagaccccag acgatgacca cagtgccgag
      601 cagcgtgacc aggaaggaga ccacctccca ccggaggatg aagacccgct cctccacctg
      661 cagcttcccg cggaggagca gcgagaggta gaagagcacc cgggtgaagg cgaaatagcc
      721 gcttgcgagc accacggccg gcgcgaggaa ctcgagcgaa atggcctgga tcccgctgac
      781 ccggagcgcg gcggcgtaga agccgaaggc gacgacgaac ccgagcgcct cccggccggc
      841 gttcaccagg ctcgcgaaga gcgtcttccg gagccaggcg aaatcggaaa ggaacacccc
      901 cgccacgatc gcgaggactc ccgtggccgg cgccgccacc agcgcggcga tcagcgcggg
      961 aatgccggtc tgggtgaggt acgagaactt gctgagccgg atcggggccg cccgcagcac
     1021 gacgatgccc gcgacgagga cggccagcaa tatcggctgg tgcatccatc ggggatcgtt
     1081 cagcgcggtg gcgagcgcca ggagcggccc cgaccaggcc agcagccggg cgtagcgctc
     1141 ggtcaggagg gcggccgcgt cgggcgcctc cggctcagag gaagtagtcg ccaacggtga
     1201 ggttgtagcg gtcgggattg gtgaccttca cgatggatcg gatgaagttg ccgtccggtc
     1261 cgcgctcact caggtcggcg gggatgccgg gcgccggcac gaccgttccc gagggatcaa
     1321 tcgcgatccg gaccagcggc cggttgaggg aatcgcggtc ggggttggcc tgggccacga
     1381 tcccgacctc gaaggtgtcc aggatgacac aggtgccgat cggatagatc ccgatcaggt
     1441 tgatcagcgc cttgacgatg atcggatcat agccgcgtcg gggattggtc cacatttccc
     1501 ggagcacctg gtcgggctcg atcgggaccg tctggtaggc ccgccgggtg gtggcggcgt
     1561 cgaagccgtc ggccaccgcc accagccggg agtagatccc gagtgtccgc ggccggatgc
     1621 agcgcggata gccggtgaga tcggtcttca tgtggtgctc gtgggccacg aggatcgcct
     1681 tgtaggggat ctcgtcatag gcccggagcc cgaagagggt catcgcgccg cgccagggat
     1741 gcgcctggat ctcgcgccac tcctcctccg ccagcccgct ggtcttgttg agcagctcga
     1801 tggggatctt ggccttcccg atgtcgtgca gcagggaggt catccccaga tcgtacagct
     1861 ggagcttgcc cagcccgatc ttccggccca gcgcgaccga gaagatgcag acgttgaccg
     1921 agtgggtgaa ggtgtactcg tcgtaatcgc gcagcgtg
//
LOCUS       DATIFF010000429         2318 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1747847, whole genome shotgun sequence.
ACCESSION   DATIFF010000429 DATIFF010000000
VERSION     DATIFF010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1747847"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(51..>2318)
                     /gene="lon"
                     /locus_tag="VLD58_06510"
     CDS             complement(51..>2318)
                     /gene="lon"
                     /locus_tag="VLD58_06510"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HSB53987.1"
                     /translation="IHVGDKNGYLESIVREAEEMSPLNPEDPAFIALYREARTRAAEL
                     GQKSGLPEEVVQQVLAGVHEPGRFADLVAGYLDITPPQRQGLLETLSVEERLRRVLVH
                     VQRQISVLDAQEDIKSQVQEELGERQREMFLREQLKQIRRELGEDDERGDLEELREKL
                     EALDLPAEARKEVDRELGRLERISRESMESQVIRTYLDNIAELPWNTRSEESLDLTKA
                     EAILNEDHYALGDVKDRVLEFLAVRQLKAEAEKVEKEADRRSGGPADSGEAATPAAET
                     DAVVTAETPTAGPADRPTAGNDDEKAAKGPILLFVGPPGVGKTSVAKSIARAMGRKYV
                     RISLGGARDEADIRGHRRTYVGAMPGRILHGMKQAGTKNPVFLLDEVDKLGVSFQGDP
                     ASALLEVLDPAQNDSFVDHYLGVPFDLSEVLFVCTANFIASIPGPLLDRMEVVDFSGY
                     TEREKLMIARNYLIPRQLKEHGLSTEQIELPDEAVSEVITGYTREAGVRQLEREIGKL
                     ARKVARKIAAKEVTQLTVTRVMVDDLLGRPKVHPERAAREDQIGVATGMYYTPVGGDI
                     MFVEASTMRGKGELVLTGQLGDVMKESARAALTYARSHAAGLHIKEDLFGTSDVHVHV
                     PAGAIPKDGPSAGVTMATALVSVLSGRPVRNDIAMTGEITLRGEVLPIGGVKEKVLGA
                     VRAGITRIVLPKKNEPDLEDLPEEVRQTLEVYPVENLGEVLALTLRGARFTQGRLLFG
                     DQTPGEVAPLQAFHH"
BASE COUNT          309 a          842 c          743 g          424 t
ORIGIN      
        1 cgctctcccg ctttcccgct atcccgctct cccgctctcc cgctctcccg ctagtgatgg
       61 aacgcctgga gcggcgccac ctcacccggc gtctggtcac cgaacagcag gcgaccctga
      121 gtgaaccggg ctccgcgcag cgtcagcgcc agcacttcgc ccaggttctc gaccgggtag
      181 acctcgagcg tctggcggac ctcttccggc aggtcctcga gatcgggctc gttctttttc
      241 ggcaggacga tccgggtgat gcctgcccgc accgcgccca gcaccttctc cttcacgccg
      301 ccgatcggca ggacttcgcc gcggagggtg atctcgccgg tcatggcgat gtcgttccgc
      361 accggccggc cggagagcac cgagaccagc gccgtcgcca tggtgacacc ggccgaggga
      421 ccatccttcg ggatggcgcc cgcgggaacg tgcacgtgca cgtcgctggt gccgaacagg
      481 tcctccttga tgtggaggcc ggcggcgtgc gaccgcgcgt aggtgagcgc ggcgcgggcc
      541 gactccttca tcacgtcacc cagctggccg gtgagcacca gttcaccctt gcccctcatg
      601 gtgctggcct cgacgaacat gatgtcgccg cccaccgggg tgtagtacat gccggtggcc
      661 acaccaatct ggtcttcccg ggcagcccgc tccgggtgca ccttgggccg gccgagcagg
      721 tcgtcgacca tcacccgggt gacggtcagc tgggtgacct ccttcgcggc gatcttgcgt
      781 gccaccttcc gggccagctt gccgatctcg cgctccagct ggcgcacccc cgcttcgcgg
      841 gtgtagccgg tgatgacttc gctcaccgcc tcgtccggca gctcgatctg ctcggtgctg
      901 agcccatgct ccttgagctg ccgcggaatc aggtagttcc gcgcgatcat cagcttctcg
      961 cgctcggtgt agccgctgaa atccaccact tccatccggt cgagcagcgg accggggatg
     1021 ctcgcgatga agttcgcggt gcagacgaac agcacctcgc tcaggtcgaa cggcacgccg
     1081 aggtagtgat cgacgaagct gtcgttctgg gcggggtcga gcacctcgag caaggcgctg
     1141 gccgggtcgc cctggaacga gacgcccagc ttgtccacct cgtccagcag gaacaccggg
     1201 ttcttggtgc cggcctgctt catgccgtgg aggatccggc ccggcatggc gccgacgtag
     1261 gtgcggcggt ggccgcggat gtcggcctcg tcccgggcgc cacccagcga gatgcggacg
     1321 tacttccgcc ccatcgcgcg ggcgatcgac ttggccaccg aggtcttgcc gacgcccggc
     1381 ggaccgacaa agaggaggat cggccccttg gcggccttct catcgtcgtt gcctgcggtc
     1441 gggcggtcgg ccggtccggc ggtcggtgtt tctgccgtca cgacggcgtc agtctcggcg
     1501 gccggcgtgg ctgcctcacc gctgtccgcc ggaccgcctg accgcctgtc cgcctccttt
     1561 tccaccttct ccgcctcggc cttgagctgg cgcaccgcca ggaactcgag cacccggtcc
     1621 ttcacatcgc ccagggcgta gtggtcctcg ttgaggatcg cttcggcctt ggtgaggtcg
     1681 agcgactcct cgctccgggt attccacggc agctcggcga tgttgtcgag ataggtccgg
     1741 atgacctgtg actccatcga ctcgcggctg atccgctcca gccggcccag ttcgcggtcg
     1801 acttccttcc gggcctcggc cggcaggtcc agtgcctcga gcttctcgcg cagctcttcc
     1861 agatcgccgc gctcatcgtc ttcgcccagc tcgcggcgga tctgcttgag ctgctcgcgg
     1921 aggaacatct cccgctgccg ctcacccagc tcctcctgca cctgcgactt gatgtcctcc
     1981 tgggcgtcca gcaccgagat ctggcgctgc acgtgcacca gtacccggcg gagccgctct
     2041 tcgaccgaga gggtctcgag caggccctgc cgctggggcg gcgtgatatc gaggtacccc
     2101 gctaccaggt cggcaaagcg gcccggctcg tggactccgg ccaggacctg ctgcaccacc
     2161 tcttcgggga gccccgactt ctggcccagc tccgcggccc gggtgcgggc ttcgcggtag
     2221 agcgcaatga aggccggatc ctcggggttg agcggcgaca tctcctccgc ctcccgcacg
     2281 atggactcga ggtaaccatt cttgtcgccc acgtgaat
//
LOCUS       DATIFF010000430         1103 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1134110, whole genome shotgun sequence.
ACCESSION   DATIFF010000430 DATIFF010000000
VERSION     DATIFF010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1103
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1134110"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..343
                     /locus_tag="VLD58_06515"
     CDS             <1..343
                     /locus_tag="VLD58_06515"
                     /inference="COORDINATES: protein motif:HMM:NF007495.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA-binding protein"
                     /protein_id="HSB53988.1"
                     /translation="AVLLMEPIQAFETLDLRVGRIIRAEPNERARKPSYKLWIDFGPL
                     GEKTSSAQLRALYRPEELVGRQVVAAVNLGTRNIAGFLSEVLVLGLPSEAGEVVLLAV
                     EREVPLGGRVY"
     gene            complement(351..749)
                     /locus_tag="VLD58_06520"
     CDS             complement(351..749)
                     /locus_tag="VLD58_06520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53989.1"
                     /translation="MRKWTWGLALSVAALGCASPDSAGGPIQQGRLYTTWLYGSQYDK
                     LWNRFSPDMRQTFGSVTDLASFAGRAVTRLGREHGVVDERVERADPFRVYSRTASFDR
                     AHQRMRLEWSLASDGEVTGLVLRPAPDSTD"
     gene            764..>1103
                     /locus_tag="VLD58_06525"
     CDS             764..>1103
                     /locus_tag="VLD58_06525"
                     /inference="COORDINATES: protein motif:HMM:NF016816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M55 family metallopeptidase"
                     /protein_id="HSB53990.1"
                     /translation="MTVVVAGVHLGGTVRVFISVDMEGVAGVVHEDQTDPTDARHAGE
                     YNRFRRLMTAEANAAVEGALAAGADGVLVNDSHWQMRNLLAEELHPAAELLSGSPKLG
                     SMVEGIDLGFD"
BASE COUNT          163 a          366 c          401 g          173 t
ORIGIN      
        1 agctgttctg ctgatggaac cgatccaggc gttcgaaacg ttggacctgc gggtgggccg
       61 gataatccgg gccgagccca acgagcgggc gcggaagccc tcgtacaaat tgtggatcga
      121 tttcgggccg ctaggggaga agacgtccag cgcgcagctg cgcgcgctct accgtccgga
      181 ggagctggtg ggccgccaag tggtcgcggc ggtcaatctc ggcacccgca acatcgccgg
      241 cttcctgtcg gaagtgctgg tcctcggcct gccgagcgag gctggggagg tcgtcctcct
      301 cgcggtggag cgcgaggtgc cgctcggcgg ccgggtatac tgaggcgcgg ctagtcggtg
      361 ctgtcggggg cgggccgaag caccaggccg gtcacctccc cgtcgctggc caggctccat
      421 tccagccgca tccgctggtg cgcccggtcg aacgacgccg tccggctgta cactcggaac
      481 ggatccgctc gctccacccg ctcgtccacc acgccgtgct cccggccgag ccgggtcacc
      541 gcgcggccgg cgaagctggc caggtcggtc acgctgccga aggtctgccg catgtcgggc
      601 gagaagcggt tccacagctt gtcatactgg ctgccgtaga gccaggtggt gtagagccgg
      661 ccctgctgaa tcgggccccc ggccgaatcg ggggacgcgc atcccagcgc ggccacgctc
      721 agggcgagtc cccaggtcca cttgcgcatc gtcggtcctc ggtgtgacgg tcgtggtcgc
      781 cggggtccat ctcggaggca ccgtgcgggt gttcatctcc gtcgacatgg aaggggtggc
      841 cggtgtggtc catgaagacc agaccgatcc caccgatgcc cggcatgcgg gtgagtataa
      901 ccgatttcgc cgcctgatga cggccgaggc gaacgccgcg gtcgagggcg cgctcgcggc
      961 cggggccgat ggggtgctgg tgaacgacag ccactggcag atgcgcaacc tcctggccga
     1021 ggagctgcac cccgcggccg agctgctgag cggcagcccc aagctcggct ccatggtcga
     1081 agggatagac ctcggcttcg acg
//
LOCUS       DATIFF010000431         1062 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_824932, whole genome shotgun sequence.
ACCESSION   DATIFF010000431 DATIFF010000000
VERSION     DATIFF010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_824932"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1055)
                     /locus_tag="VLD58_06530"
     CDS             complement(<1..1055)
                     /locus_tag="VLD58_06530"
                     /inference="COORDINATES: protein motif:HMM:NF012632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53991.1"
                     /translation="MAIVFSPGPGSGTVSPSSNLTDAGGRAATKWTLGSTGGQAAVTA
                     SGGGFVAQFLGAANFKYMAVSAGAKHSCGLDEGGVAYCWGYNGDGQLGIGVAPLGSGP
                     VFAYPQPTASIGDLTFSQLAGGAYHTCGLTLSGVGHCWGVNVDGRLGTGNFTPVNAPT
                     QVLVNRAFAGMSAGQAHSCALDLSNHAACWGRNVDAQLGFGYTAVPPQRIAPDSVAIN
                     VPVLILSGQLFSQIASGGVHNCALELFTAAAWCWGNQVNGQLGNGVSGAAGALPSVGT
                     VPVAGGMAFSAITAGDLHTCAIDLAGAAWCWGSDASGQLGDNPAALPGPIQNVPVPVS
                     GGKTFKAISAGRSHTCA"
BASE COUNT          171 a          373 c          362 g          156 t
ORIGIN      
        1 atcgcgcacg tgtgtgaacg accggccgaa atcgccttga aggtctttcc cccgctgacg
       61 gggacgggca cgttctggat cggtcccggc agggcggcgg ggttgtcccc gagctgcccg
      121 ctggcatcgc tcccccagca ccacgcagcg ccggccaggt cgatggcgca ggtgtgaagg
      181 tcgcccgcgg tgatggccga gaacgccatc ccgccggcaa ccggaaccgt gccgaccgac
      241 ggcaaggccc cggcggcacc actcacccca ttgccgagct gtccgttcac ctggtttccc
      301 cagcaccacg ctgccgcggt gaagagctcg agcgcgcaat tgtggacccc accggaggcg
      361 atctggctga agagctggcc ggacaggatc agaaccggga cattgatcgc cacgctatcg
      421 ggggcgatgc gctgcggggg aacggcggtg tagccgaacc cgagctgggc gtccacgttt
      481 ctgccccagc acgccgcgtg attcgagaga tcgagggcac agctgtgggc ctggccggcg
      541 ctcatcccgg cgaaggcgcg gttcaccagg acctgggtgg gcgcgttcac cggagtgaaa
      601 ttccccgtac cgagacgccc atccacgttc acgccccagc agtgtcccac tcccgagagc
      661 gtgaggccac aggtgtggta ggcgccgccg gcgagctggc tgaaggtgag atcaccgatt
      721 gatgcagtcg gctgcgggta ggcaaacacc ggtccgctcc ccagcggcgc cacgccgatg
      781 ccgagctggc catccccgtt gtagccccag caatacgcta cgcccccctc gtcgaggccg
      841 cagctgtgtt tcgccccggc cgagacggcc atgtacttga agttcgctgc tccgaggaac
      901 tgtgcgacga atcccccgcc cgaggccgtc acggcggcct gtccgccggt cgatccgagg
      961 gtccacttcg tggccgcccg tccgcccgcg tcggtgagat tgctcgaggg actgacggtg
     1021 ccgctgccag ggccggggga gaacacgatg gccacgcccg cg
//
LOCUS       DATIFF010000432         1396 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_364043, whole genome shotgun sequence.
ACCESSION   DATIFF010000432 DATIFF010000000
VERSION     DATIFF010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1396
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_364043"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..512
                     /locus_tag="VLD58_06535"
     CDS             <1..512
                     /locus_tag="VLD58_06535"
                     /inference="COORDINATES: protein motif:HMM:NF013694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CorA family divalent cation transporter"
                     /protein_id="HSB53992.1"
                     /translation="LISDVAEKLPGLEQHVMSSQLTEPEELLERMFLVRHELITARTM
                     AAQTHDVYARIASLDRVVPEPSRVLARDLADQFDRVRSVADGESQFLFGVIELYQTKV
                     NTKMTVAMERLAVIAAVTLPITAIASIEGMNMIVAVRENFIELTVVLLIMAVMSFWVL
                     RWARRQGWW"
     gene            complement(516..1226)
                     /locus_tag="VLD58_06540"
     CDS             complement(516..1226)
                     /locus_tag="VLD58_06540"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HSB53993.1"
                     /translation="MSDHDFGGLRAMYVNCTLKRSPEQSHTAGLVDASAAIMRKHGIE
                     VEVLRAVDEDIATGVYPDMTEHGWASDAWPEIYPRVLASDILVIAGPIWLGDNSSVTK
                     RVIERLYSLSGHLNEAGQWLFYGRVGGCLITGNEDGIKHCAQNILYSLQHIGYTIPPQ
                     ADAGWIGEAGPGPSYLDPGSGGPENDFTNRNTTFMTWNLMHLAKMLKDAGGIPAYGNQ
                     RAQWDAGARFDYQNPEYR"
BASE COUNT          204 a          464 c          490 g          238 t
ORIGIN      
        1 cgctgatcag cgacgtggcc gagaagctcc ccggcctcga gcagcacgtg atgagctccc
       61 agctcaccga gccggaggag ctgctggagc ggatgttcct ggtccgccac gagttgatca
      121 ccgcccgcac gatggcggcg cagacccacg acgtgtacgc ccggatcgcc tcgctggacc
      181 gggtcgtacc ggagccctcc cgggtgctcg cccgcgacct cgccgaccag ttcgaccggg
      241 tccgctcggt cgccgacggc gagtcgcagt tcctgttcgg cgtgatcgag ctctaccaga
      301 ccaaggtcaa caccaagatg acggtggcga tggagcggct ggcggtgatc gcggcggtca
      361 ccctgccgat caccgcgatc gcgtccatcg aggggatgaa catgatcgtc gcggtgcggg
      421 agaacttcat cgagctgacc gtcgtactcc tgatcatggc ggtgatgagc ttctgggtgc
      481 tgcgctgggc gcggcgccag ggctggtggt gaggctcagc ggtactccgg gttctggtag
      541 tcgaacctcg ccccggcgtc ccactgggcg cgctggttgc cgtaggccgg gatcccgccg
      601 gcgtccttca gcatcttcgc caggtgcatg aggttccagg tcatgaacgt ggtgttgcgg
      661 ttggtgaagt cgttctccgg cccgccgctg ccggggtcga ggtacgacgg gccgggcccc
      721 gcctcaccga tccagccggc gtcggcctgc ggcgggatgg tgtagccgat gtgctgcagc
      781 gagtagagga tgttctgcgc gcagtgcttg atgccgtcct cgttgccggt gatcaggcag
      841 ccgccgaccc gcccgtagaa caaccactgg ccggcctcgt tgaggtggcc ggacagcgag
      901 tacagccgct cgatgacccg cttggtgaca ctggagttgt caccgagcca gatcggcccg
      961 gcgatgacca ggatgtcgct ggccagcacc cgcgggtaga tctccggcca cgcgtccgac
     1021 gcccagccgt gctcggtcat gtccgggtag acgccggtgg cgatgtcctc gtcgacggcg
     1081 cgcagcacct ccacctcgat gccgtgcttg cgcatgatgg cggcgctggc gtcgaccagg
     1141 cccgcggtgt ggctctgctc cggggaccgc ttcaaggtgc agttgacgta catcgcccgc
     1201 aggccgccga agtcgtggtc gctcatgagg cgactcttcc cgggcggccc gcgggcgggc
     1261 aatggtcaga gttgacggtt cggtgacagg gagacggtct ggtgggacac ccccgcccga
     1321 cccacggcga cccgtcactc agtagtacca ggggaacggc gaccagtccg gctcccgctt
     1381 ctccaggaac gcgtcc
//
LOCUS       DATIFF010000433         3014 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1902981, whole genome shotgun sequence.
ACCESSION   DATIFF010000433 DATIFF010000000
VERSION     DATIFF010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3014
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1902981"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..597
                     /locus_tag="VLD58_06545"
     CDS             <1..597
                     /locus_tag="VLD58_06545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB53994.1"
                     /translation="RMLTGLMAPTSGQATVAGIDVVRNPEVVRHRLGYMSQRYGLYDD
                     LTVEENLRFYAGLYGLVGSEGRSRVEEQIADLDFTERRRQLAGTLSGGWKQRLSLACA
                     TSHRPDVLFLDEPTAGVDPAARRHFWEVIRAMAAGGTTILVTTHYMDEAERCERLAIL
                     WRGKLEAVGTPRDIVAQLGAPSLEDAFIALQLRDEAAA"
     gene            594..1703
                     /locus_tag="VLD58_06550"
     CDS             594..1703
                     /locus_tag="VLD58_06550"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB53995.1"
                     /translation="MIPTRIARWPFWAMLRKEFIQMRRDRMTLGMMIGVPAIQLVMFG
                     FAIRTEVRHLPTIVLDESRTRESRELIASLVNSTYFRVVGEVRGREEIEQAIASGRAA
                     AAVVIPHEFSRDLKRHRGAEAQVIVDAADPLSSQSALQGASLAGLAFRPSPRAQSVSL
                     RVRPWYNPMLDSATYIVPGIIGVLLSMTMIIINAMSVVRERERGTLEQLIVTPVDRTS
                     LMLGKIVPFLLVGYVQIVVILILGRILFDVPIRGSIFELLLMAFPFVVASLGLGLFFS
                     TLVRTQAQAMQAGFLFIMPNILLSGFMFPRAAMPAPAQWLGLMLPLTYFLDILRGILL
                     KGVGMEALWPQFLALWGFAILIVTLSVRRFHKTLE"
     gene            complement(1704..2513)
                     /locus_tag="VLD58_06555"
     CDS             complement(1704..2513)
                     /locus_tag="VLD58_06555"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSB53996.1"
                     /translation="MTARDVALVTGASSGIGRAIAARLAGDGCLVFGTSRNPAKATAL
                     PGVTLLPLDVTDDASVSALVRTVLEQAGRIDVLVNNAGVAVVGAVEEVPLSLAHQQFE
                     TNYFGVLRMIQAVLPAMRSQGAGHIINVGSVAGHVAMPFAGQYTATKFALEGLSEALR
                     HEVAAFGIKVALVEPGFFKTELIGVATAPSETLGAYDTARARVHARIRAIEDAAPPPA
                     AVADLVLRLARNPDPPLRNLVGKEKIFVLLKRLLPYSRFEPSTRGYWRLSV"
     gene            2739..>3014
                     /locus_tag="VLD58_06560"
     CDS             2739..>3014
                     /locus_tag="VLD58_06560"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSB53997.1"
                     /translation="MRKAVRSRKPAGKARAAAEPHRQPRQERGERRVEEILDAAAAVI
                     AEGGVEAATTNAIAERAGSSVGSLYHFFPHKDAIVLALAERYEAELRR"
BASE COUNT          472 a         1026 c         1004 g          512 t
ORIGIN      
        1 cggatgctca ccggtctcat ggcgcctacc tcggggcagg ccacagtggc cggcatcgac
       61 gtggtccgga atccggaggt ggtacgccac cgcctgggct acatgtccca gcgttacggg
      121 ctctacgatg atctcacggt cgaggagaat ctgcggttct acgccggcct gtacgggctg
      181 gtggggagcg aaggacggag ccgggtggaa gagcagatcg ccgacctgga cttcaccgag
      241 cggcggcggc agctggcggg aaccctgtcg ggcgggtgga agcagcggct ctcactggcc
      301 tgcgccacca gtcaccgtcc cgacgtgctc ttcctcgacg agcccacggc cggcgtggat
      361 ccagccgccc gccgccactt ctgggaggtg atccgcgcca tggccgcggg cggcaccacc
      421 atcctggtca ccactcacta catggatgag gcggagcgct gcgagcggct ggcgattctc
      481 tggcggggca agctcgaagc cgtcggcacc ccgagggata ttgtggcgca gctgggagca
      541 ccgtcattgg aggacgcctt catcgctctg cagctccggg acgaggcggc cgcatgattc
      601 ccacccgcat cgcacgctgg cccttctggg ccatgctccg caaggagttc atccagatgc
      661 ggcgggatcg catgacgctc ggcatgatga tcggcgtccc ggcgattcag ctggtgatgt
      721 tcggcttcgc catccggacc gaggtgcggc acctgccgac catcgtgctg gacgaatcgc
      781 gcacccggga aagccgtgaa ctgatcgcgt cgctggtgaa ctcgacctac ttccgggtgg
      841 tgggcgaggt gcgcggacgg gaggagatcg agcaggccat cgcgagtggc cgggccgctg
      901 ccgcggtggt gattccccat gagttctccc gcgacctcaa gcgccatcgg ggcgcggagg
      961 cccaggtcat cgtggacgcc gccgacccgc tctcgtccca gtcggcattg cagggggcct
     1021 ccctcgccgg gctggccttc cggccctcgc cccgggccca atccgtctcc ctcagggtcc
     1081 gcccctggta caacccgatg ctcgacagcg cgacctacat cgtgccgggg atcatcggtg
     1141 tgctgctttc gatgacgatg atcatcatca acgccatgtc agtggtgcgg gagcgggagc
     1201 gcggcaccct ggaacagctg atcgtgacgc cggtcgatcg caccagcctg atgctcggga
     1261 agatcgtgcc gttcctgctg gtcgggtacg tgcagatcgt cgtgatcctg atcctcggcc
     1321 ggatactgtt cgatgtgccg atccgcggca gcatcttcga actgctgctg atggccttcc
     1381 ctttcgtcgt ggccagcctc ggactgggac tcttcttctc caccctggtg cgtacccagg
     1441 cgcaggcgat gcaggcaggc ttcctgttca tcatgcccaa catcctgctg tcggggttca
     1501 tgttcccccg ggccgccatg cccgccccgg ctcagtggct ggggttgatg ctccccctca
     1561 cctacttcct ggatattctc cggggaatcc tcctcaaggg cgtcggcatg gaggcgctct
     1621 ggccccagtt cctggcgctg tgggggttcg cgatcctcat cgttacgctg tcggtgcggc
     1681 gcttccacaa gacgctcgag tagctacacc gagaggcgcc agtagccgcg ggtgctcggc
     1741 tcgaaccggc tgtacggcag gagccgtttg agcagcacga agatcttctc cttccccacc
     1801 aggttccgaa gcggcgggtc ggggtttcgc gccagccgca gtaccaggtc ggccaccgct
     1861 gcgggcggtg gcgcggcgtc ttcgatcgcc cggattcggg cgtggacccg ggccctggca
     1921 gtgtcatagg cgccaagcgt ctccgatggc gcggtggcca ccccgatcag ctcggtcttg
     1981 aagaaccccg gctccaccag cgccaccttg atcccgaatg ccgcgacctc gtgtcgcagg
     2041 gcctcggaga gtccctccag cgcgaacttg gtggcggtgt attgccccgc gaacggcatg
     2101 gccacgtggc cggccaccga gccgacattg atgatgtgac ccgcgccctg gctccgcatg
     2161 gcgggcagca ccgcctggat catccgaagc actccgaagt agttggtctc gaactgctgg
     2221 tgtgccagcg atagcggcac ctcctcgacc gcgcccacca ccgccacacc agcgttgttc
     2281 accagcacgt cgatccggcc agcctgctcg agcaccgtcc ggaccagcgc ggacaccgac
     2341 gcgtcgtcgg tcacgtccag cgggagcagc gtgacgccgg ggagcgccgt cgccttcgcc
     2401 gggttccggc tggtgccgaa gacgaggcag ccatcgcccg ccagccgtgc ggcgattgcc
     2461 cggccgatgc cactcgaggc gcctgtcacc agcgcaacat cccttgcagt cattggatct
     2521 tcctcgcgtt caggtttgcg gcaacggctc gagcccgagt ggcggagaaa cacgctcggg
     2581 gcccccgccg cgaaaccatg aagtagagca cgcgctctac ttttacgaag caaactagag
     2641 caaggattct acttgtcaag acgggatggc tgtaacatgt ttgtgcctgc gcccaccggg
     2701 gcccgctccc ggacccggcc catgcgatgg aaggtgtgat gaggaaagcg gttagatccc
     2761 gaaagccagc cggcaaggcc cgggcggcag cggagcctca ccggcagccg cggcaggagc
     2821 ggggagagcg ccgggtcgaa gagatcctcg atgcggccgc cgcggtcatc gccgaaggag
     2881 gggtggaggc ggcgaccacc aacgcgatcg ccgagcgggc cggatcatcg gtcggctcgc
     2941 tctaccactt cttcccccac aaggacgcca tcgtcctcgc gctggcggag cgctacgagg
     3001 ccgagctccg ccgg
//
LOCUS       DATIFF010000434         1088 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_211262, whole genome shotgun sequence.
ACCESSION   DATIFF010000434 DATIFF010000000
VERSION     DATIFF010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211262"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..221
                     /locus_tag="VLD58_06565"
     CDS             <1..221
                     /locus_tag="VLD58_06565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB53998.1"
                     /translation="AAPEEIRAQDERIRSELDQALAACIDEPFPDASTALTGVYAAPS
                     SAPVEWYRTLPQAGDTGRHAALPPDRLP"
     gene            218..>1088
                     /locus_tag="VLD58_06570"
     CDS             218..>1088
                     /locus_tag="VLD58_06570"
                     /inference="COORDINATES: protein motif:HMM:NF014798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HSB53999.1"
                     /translation="MTETTYLEAIREGLREELARDERVFLMGEDIGNFGGAFKVTEGL
                     QAEFGATRVIDTPVSETAIVGAAAGAAHMGMRPVCEMQFIDFISCAYSILTNYVATAR
                     YRAGLATPMVVRGPSGGYVRGGPFHSQNPEAAFLHTPGLKIVAPATARDAKGLIKAAI
                     RDEDPVLFFEHKYLYRRVKETLPPGDLVTPIGTARVAREGRDCSIVTWSAMVWKALEA
                     ADRLAAEDGLSIEVIDLRTLLPLDDEALVATVRKTNRVLVAHEDTRTGGVAGEIIARI
                     NELAFEWLDAPVRR"
BASE COUNT          171 a          364 c          374 g          179 t
ORIGIN      
        1 gggctgctcc cgaggagatc cgggcccagg acgagcgcat tcggtcggaa ctcgaccagg
       61 cgctggccgc ctgcatcgac gagccctttc cagatgccag cactgcgctg accggtgtgt
      121 atgccgctcc gtcatccgcg ccggtcgaat ggtaccggac cctgccgcaa gccggtgata
      181 ctggccgcca tgccgccttg ccgcctgacc gcctgccatg actgagacca cctatctcga
      241 agcgatccgt gagggcctgc gcgaagagct ggcgcgggac gagcgggtct ttctcatggg
      301 tgaggacatc ggcaacttcg gtggggcctt caaggtcacc gaaggactgc aggccgagtt
      361 cggggcgacc cgcgtgatcg acaccccggt gagcgagacg gccattgtcg gcgcggcggc
      421 cggcgccgct cacatgggca tgcggccggt ttgcgagatg cagttcatcg acttcatttc
      481 ctgcgcctac agcatcctta ccaattacgt cgccaccgcg cggtaccgcg ccggtctcgc
      541 caccccgatg gtggtccgcg ggcccagcgg tggctacgtt cggggcggcc cgttccacag
      601 tcagaacccc gaggccgcct tcctccacac cccggggctc aagatcgtgg ccccggccac
      661 ggcgcgggac gccaagggac tgatcaaggc ggccatccgg gacgaggacc cggtgctctt
      721 cttcgagcac aagtatcttt atcggcgggt caaggagacc cttccccccg gcgatctggt
      781 gaccccgatc gggaccgccc gggtggcgcg cgagggccgg gattgttcca ttgtcacctg
      841 gtccgcgatg gtctggaagg cgctggaggc ggccgaccgg ttggctgcag aggacggcct
      901 ctcgatcgag gtgatcgatc tccggaccct gctccccctc gatgacgagg ccctggtcgc
      961 cacggtaagg aagaccaatc gggtgctggt ggcccacgag gataccagga ccgggggcgt
     1021 cgccggagag attatcgccc ggatcaacga gctggcgttc gagtggctgg atgccccggt
     1081 gcggcggg
//
LOCUS       DATIFF010000435         3273 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_364478, whole genome shotgun sequence.
ACCESSION   DATIFF010000435 DATIFF010000000
VERSION     DATIFF010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3273
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_364478"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..574)
                     /locus_tag="VLD58_06575"
     CDS             complement(<1..574)
                     /locus_tag="VLD58_06575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54000.1"
                     /translation="MSKSTPETNPIERLLQDRAQFVSWLTRLNSAEGVPTVPEAVRSR
                     VRGDYERRLESVLTELRGHTTALEEQVAGLSARVNELSGREGELKEQLSEAEVRHVVG
                     EYDDGKWDGIRAELTKVILQVREELSHTGAEVTRLNDVLRTIRAPALPETAPEPVPPP
                     PLPSLGNSAPRPAITGSGPRAAVIPEMIPLV"
     gene            complement(661..1950)
                     /locus_tag="VLD58_06580"
     CDS             complement(661..1950)
                     /locus_tag="VLD58_06580"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HSB54001.1"
                     /translation="MIRPILIRGGRVIDPSRNSDGIADVYLQDGRVTAVGTNIAIEEG
                     VQVVDATGKVVAPGLIDLHVHLREPGQEDLETVATGAMAAAAGGFTAVCAMPNTDPVL
                     DNQGAIGFVISQAQKAAKARVYPIGTISLGQKGEQLAEMGELVGAGAVAVSDDGKPVM
                     SSHLMRTALEYAKTFGIPVADHCEDMSLAKGGAMHEGIVSTRLGLKGIPAAAEEIMVA
                     RDIILAELTGGHVHLCHMSTRGSVSLIRRAKDMGLKVTAEATPHHFTLTHEACEGYNT
                     NAKMNPPLREDLDRAAIRQGIKDGTIDVIATDHAPHHYDAKEREFDDAPNGILGLETA
                     FGLAVTELVEPGLITLPELIYRMSTHPARIFNLPGGTLTVGAPADLVILDPAARWTVD
                     PSTFFSKSRNTPFTGRTLTGRTDLTIVRGRVVYDRLS"
     gene            complement(1947..2906)
                     /locus_tag="VLD58_06585"
     CDS             complement(1947..2906)
                     /locus_tag="VLD58_06585"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HSB54002.1"
                     /translation="MSPLSALGKDLLGLEYLSADQIRLILDTAEPFKEVSERPIKKTP
                     ALRGKTIVNLFFEASTRTRISFEFAEKRLSADTVNVAIAASSVSKGETLVDTARNLEA
                     MRIYMVVIRHHSSGSADFLAQRIRSNVVNAGDGVHEHPTQGLLDLLTLRDRFGRIEGL
                     KVAICGDVLHSRVARSNIWGLRKLGAEVAVCGPLSLVPRDIRELGVTLFTRIEEAIEW
                     ADALNVLRLQLERMTAGFIPSLREYNRVFGVTRDRLARAKKELVVMHPGPINRGVEID
                     SDVADGPHSIILPQVTNGVAVRMAVLYLLAGGMPDWQQQGGSE"
     gene            complement(2906..>3273)
                     /gene="pyrR"
                     /locus_tag="VLD58_06590"
     CDS             complement(2906..>3273)
                     /gene="pyrR"
                     /locus_tag="VLD58_06590"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HSB54003.1"
                     /translation="GRAIPTGKLDITLYRDDLQTIGPRPVIGETHLPADLDGRTVVIV
                     DDVLYTGRTIRAALDELADFGRPRRILLCVLVDRGGRELPIHPDIVGLRQSTGTDERI
                     DVQVKELDGKDAVELVRSS"
BASE COUNT          490 a         1069 c         1156 g          558 t
ORIGIN      
        1 gaaccagcgg gatcatctcc ggaatcaccg cggcgcgcgg acccgacccg gtaatcgcgg
       61 gacgaggggc cgaattgccc agcgagggga gcgggggcgg aggcaccggt tcaggagcgg
      121 tctcgggaag ggccggagcc cgaatggtac ggaggacatc gttgagccgg gtgacttcgg
      181 cgccggtgtg gctcagttcc tcccgcacct ggaggatcac cttggtcaat tcggcgcgga
      241 tgccgtccca tttgccgtcg tcatactcgc ccaccacgtg gcgaacctcg gcctcggaga
      301 gctgttcctt gagctcccct tcccggccgg agagctcgtt gacccgggcg ctgagcccgg
      361 ccacctgctc ttccagcgcg gtcgtgtggc cccgcagctc ggtaagcacc gactcgagcc
      421 gccgttcata gtcgccccgg acccgggagc gaaccgcttc ggggacggtc gggacgccct
      481 ccgcggagtt gagcctcgtc agccagctga cgaactgggc ccggtcctgg agcaggcgct
      541 cgatcgggtt ggtctcaggt gttgacttgg acatgtccgg aaatccctct gggcccgagc
      601 agcgctccct ggcgcggagc ggttacctga tcaccggcca aatctaaccc accagtgagt
      661 ttacgaaagc cggtcgtaga ccacccggcc ccggacaatg gtgaggtcgg tccggcccgt
      721 tagggtccgg ccggtgaatg gggtgttccg gctcttggag aagaaggtcg agggatcgac
      781 cgtccagcgg gccgccgggt cgaggatcac cagatcggcc ggggcgccca ccgtcagcgt
      841 tccgccaggg aggttgaaga tccgagccgg gtgggtgctc atccggtaga tgagctcagg
      901 caaggtgatg agccccggct cgaccagctc ggtcacggcc aggccgaatg ccgtctccag
      961 tcccaggatg ccattggggg cgtcgtcgaa ctcgcgctct ttggcgtcgt agtggtgggg
     1021 cgcgtgatcg gtggcgatca cgtcgatggt gccgtccttg atgccctgac ggatcgccgc
     1081 ccggtcgaga tcctcgcgca gcggcggatt catcttcgcg ttggtgttgt acccctcaca
     1141 ggcctcatga gtcagcgtga agtgatgcgg cgtcgcctcg gccgtcacct tgagccccat
     1201 gtccttggcg cggcggatca gcgaaaccga gccgcgagtc gacatgtgac agagatgcac
     1261 gtgcccgccg gtcagctcgg ccaggatgat gtcgcgcgcg accatgatct cctcggccgc
     1321 cgcgggaatg cccttgaggc cgagccgggt ggagacaatg ccttcgtgca tcgcgccgcc
     1381 cttggcgaga ctcatgtcct cgcagtggtc ggccaccgga atgccgaagg ttttggcgta
     1441 ctccagggcg gtccgcatca ggtggctcga catcaccggc ttgccgtcgt cgctcacggc
     1501 gacggccccg gccccgacca gctcgcccat ctcggccagc tgctcgccct tctggcccag
     1561 agagatggtg ccgatcgggt agacccgggc cttggccgcc ttctgggcct ggctgatcac
     1621 gaagccgatc gcgccctggt tgtcgagcac cggatcggtg ttcggcatgg cgcagacggc
     1681 ggtgaagccg cccgcggccg cagccatggc gccggtcgcc accgtctcca ggtcttcctg
     1741 gcccggttcg cggaggtgca cgtggagatc gatgagcccg ggggccacca ccttccccgt
     1801 cgcatcgacc acctgcacgc cctcttcgat ggcgatgttg gtgccgaccg cggtgacccg
     1861 gccatcctgg agatacacgt ccgcgatgcc atcgctgttg cgggacgggt cgatcacccg
     1921 gccaccgcgg atcaggatcg ggcggatcac tcgctacctc cctgttgctg ccagtcgggc
     1981 atgccgccgg cgagcagata gagcacggcc atgcggacgg ccacgccgtt ggtcacctgc
     2041 ggcaggatga tgctgtgggg gccgtcggct acgtcgctgt cgatctcgac cccgcggttg
     2101 atgggcccgg ggtgcatcac caccagctcc ttcttcgcgc gggccagccg gtcgcgggtg
     2161 acgccgaaca cccggttgta ctcacggagg gaggggatga agcccgccgt catccgctcg
     2221 agctggagcc ggagcacgtt gagggcgtcg gcccactcga tggcctcttc gatccgggtg
     2281 aagagggtga cccccagctc ccggatatcg cggggcacca ggctgagcgg tccgcagacc
     2341 gccacctcgg cgcccagctt gcggaggccc cagatgttgc tccgcgccac ccggctgtgg
     2401 agcacgtcgc cacagatcgc caccttcagg ccttcgatcc ggccgaagcg gtctcgcagg
     2461 gtgagcaggt cgaggagccc ctgggtcggg tgctcgtgca ccccgtcgcc ggcgttgacg
     2521 acgttggagc ggatccgctg ggcaagaaag tcggccgagc cggaggagtg atggcggatg
     2581 acgaccatgt agatccgcat cgcctcgagg ttccgggcgg tgtcgaccag ggtttcaccc
     2641 ttggagaccg agctggctgc gatagccacg ttgaccgtgt cggccgacag gcgcttctcg
     2701 gcgaactcga aggagatgcg ggtgcgggtg ctggcttcga agaagaggtt gacgatggtc
     2761 ttgccgcgga gcgccggcgt cttcttgatg ggccgctcgc tcacttcctt gaagggctcg
     2821 gcggtgtcga ggatcaggcg gatctggtcg gcggagagat actcgaggcc gaggaggtcc
     2881 ttgccgaggg cagagagggg gctcatcagc tcgaccgcac cagctcgacc gcatccttcc
     2941 catccagttc cttcacctgg acgtcgatcc gctcgtcggt gccggtggac tgccgcagcc
     3001 ccacgatatc ggggtggatc ggcagttccc ggccgccccg gtcgaccagg acacagagga
     3061 ggatccggcg ggggcgcccg aagtcggcca gttcgtcgag ggccgcccgg atggttctcc
     3121 cggtgtagag cacgtcgtcc acgatgacca cggtgcggcc gtccaggtcg gccgggaggt
     3181 gagtctcccc gatcaccggc cgggggccga tggtctggag gtcatcgcgg tagagggtga
     3241 tgtcgagctt gccggtgggg atggcccgcc ctt
//
LOCUS       DATIFF010000436         6000 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2057590, whole genome shotgun sequence.
ACCESSION   DATIFF010000436 DATIFF010000000
VERSION     DATIFF010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6000
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2057590"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..722
                     /locus_tag="VLD58_06595"
     CDS             <1..722
                     /locus_tag="VLD58_06595"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSB54004.1"
                     /translation="EQWFKNQDPIGRRIRLQSGMDNQGDGWLTIIGVAGDVHHRALTL
                     PPQPETYVPFRQRPTRGYSVALTVRSRGEPKELEPALRQALAAVATDVVPVYMTMRER
                     LAASQTDRQFTTTILAAFALIALLLAGVGIYGVVSYTTAQRTREMGIRLALGALPAQV
                     RALVHRTAMTQVFAGLVAGLAVAAAGTRLLRTLLYEITSLDPLAFAGSALLLVLAAVI
                     ASWYPAWRMARLDPMRTIRSE"
     gene            719..1813
                     /locus_tag="VLD58_06600"
     CDS             719..1813
                     /locus_tag="VLD58_06600"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB54005.1"
                     /translation="MSDDLIGRLAIPGYAIERELGGGGMSRVFLAREVALARPVAIKV
                     LEGGGARVDVERFRREILLAAQLSHPHIVPLLTAGEVDGLLYYIMPYVEGQSLRSRLR
                     EAERLPIGEVVRLLRNVGSALAAAHARGVVHRDIKPDNIIVIGGVAVVLDFGVSKALA
                     VSATVPADGLTGAGLAIGTPRYMAPEQVVADPDIDVRADIYALGVLAYEMLTGAPPFV
                     GTDPVKIVRAHLTETPAPVSSRRPDIPPVVAAMVMRCLEKHRERRPASATEVLDLLDA
                     AATPSLVASTSLGAAASRGVAWATAALLPALVYLAAAGIMLAGLRWLASQGHIGTRLV
                     VFSVILALLGLPVVVGVGLLLGVRRAERGY"
     gene            complement(1817..2362)
                     /locus_tag="VLD58_06605"
     CDS             complement(1817..2362)
                     /locus_tag="VLD58_06605"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSB54006.1"
                     /translation="MAWAGMRAGSSRRSLRGAPPAPGSGVLGPSRSRGWHDTERLLGA
                     VDRYHGAVGNHGAWGWSWGRIAAIQIPYNPIERDAEREILPLANELGLGVVIMRPFAE
                     GALLRRTPASAALHPLAPFGVTTWPQALLKWILSDPRCHVAIPATSRPERVDQNAAAG
                     APPWFGPEERGYVARLASAKP"
     gene            complement(2253..3380)
                     /locus_tag="VLD58_06610"
     CDS             complement(2253..3380)
                     /locus_tag="VLD58_06610"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HSB54007.1"
                     /translation="MRRTERIPVVVIGGGQAGLATGYYLERAGIPFVILDAGVRVGDA
                     WRERWDSLRLFSPSFYDGLPGMRFPGPAFTWPTKDQMGDYLERYAKRFQLPVRLKTRV
                     TLVRRQGGEFLVESTAGTIHAEQVVVAMSNYQKPRIPAFARQLDPVIRQFHSTTYRNP
                     AQLAPGSALVVGAGNSGADIAMDLIDSRATLLAGRDVGHIPFRIETPAARYLFVHLVR
                     FIGHHVLSLGTPIGRKARPGRLHAATPLVRIKPGDLIAAGVERVPRVVGAQNGQPLLE
                     DGRVLDVRNVVWCTGFEPANEWIDLPIFDANRDPQHRAGIVDAAPGFYFVGLNFLYSA
                     TSATVNGVGRDARRIVEAITARRSTRTRERRPRSEPVARMA"
     gene            complement(3486..5129)
                     /locus_tag="VLD58_06615"
     CDS             complement(3486..5129)
                     /locus_tag="VLD58_06615"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HSB54008.1"
                     /translation="MEEPQAPPTVADGQALYQRRAWNQAYHALQLAGRSHPLSPEDLT
                     LLSHSAHLSGREPERFDLLIRAHQAFLEAGQREAASRCAIWLAFLLEFQGQSAQSNGW
                     LARAKRLLEEHGQECVELGYLELPMAIRAFFGGDATAAYSHFSHAAETANRFGDVELA
                     VLARHGQGRALIRLNRVAEGVALLDEVMVAVTTDEVSPVIAGELYCSVLEACHEMYDL
                     RRAQEWTLALARWCDSQPELVAFRGSCHARRSEILLLHGEWLEAESAAREACANQPDR
                     AAALAWYQLGEVYRQQGEMAEAERAYHEAGTRGLQPEPGLALLRLAQGRVGQAGQSIR
                     RALTAAHGPRARSALLSAAVEIALAEPDLSAAEQWAAELGGIAEESGARYLEAAAAQA
                     RGMVLGAQDRCSEALAELRHARGLWRELGMPYHAARVAVLVAQGCQKEGDTDAAAIEL
                     QSARRAFADLGAHHDLTRLAAQVAPATAAGGGLTARELEVLTMLAGGHTNRAISERLG
                     ISEKTVARHVSNIFSKLNLSSRSAATAYAYQHRLISTTT"
     gene            5320..>6000
                     /locus_tag="VLD58_06620"
     CDS             5320..>6000
                     /locus_tag="VLD58_06620"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB54009.1"
                     /translation="MFYWQDLRYALRLLARQPLFTLLTVAVLAGGLGLSIFTFSFLHT
                     AMLKPLPVPGGERIVRLLARSGPNGAPLEAADIAAMRTQVTTLSDIGVFAARDLVVGT
                     GEGSRVIRATASEWSIFEVTHTRPAIGRSFTPDDQRPGSEPVMILTHWAWRVLFGADS
                     GVIGKTVPINGVSTRVVGVMPDGFGFPVASEAWVPIETEFLRLPVPLDRQVEAYARLA
                     PGATPARAE"
BASE COUNT          880 a         2032 c         2115 g          973 t
ORIGIN      
        1 cagagcagtg gttcaagaac caggatccga tcggccggcg aatccggctc cagtcgggca
       61 tggacaatca gggggacggc tggctcacga tcatcggtgt ggccggcgat gtgcatcacc
      121 gggcactgac cttgccgccg cagccggaga cctatgtccc cttccgccag cggcccaccc
      181 ggggctactc ggtcgcgctc acggtgcgga gccggggtga accgaaggag ctggagccgg
      241 cgctccgcca ggcgctggcc gcagtggcca ccgatgtagt cccggtctac atgacgatgc
      301 gtgagcggct ggctgcctcg cagaccgatc ggcagttcac cactacgatc ctcgcggcct
      361 tcgcgctcat cgcgctcctg cttgccgggg tggggatcta cggtgtggtc tcgtacacca
      421 ccgcacagcg cacccgtgaa atggggattc gtctcgcgct gggcgcgctg ccggcccagg
      481 tccgggcgct ggtccatcgc acggcgatga ctcaggtgtt cgccgggctg gtagccggtc
      541 tggcggtggc ggcggccggc actcggctgc tccggaccct gctctacgag atcacgtcgc
      601 tcgatccgct ggccttcgcc gggtcggcgc tgctgctggt actggccgcg gtcattgcga
      661 gctggtatcc cgcctggcgc atggcccggc tcgaccccat gcgaaccatc cgcagcgaat
      721 gagcgacgat ctgatcggcc gactcgcgat ccccgggtat gccatcgagc gcgagctcgg
      781 tggtggaggg atgagccggg tcttcctcgc gcgggaggtc gcgctggcgc gcccggtggc
      841 catcaaggtg ctcgaggggg gcggagcccg ggtggatgtg gagcgcttcc ggcgggagat
      901 tctcctcgcg gcacagctca gtcacccgca tatcgtcccg ctgctcaccg cgggcgaggt
      961 cgatgggctc ctctactaca tcatgcccta cgtggaaggg caatcgctgc ggagccggct
     1021 ccgcgaggcg gagcggctcc cgatcggcga agtggtgcgc ctgctccgca atgtggggtc
     1081 ggccctggcg gcggcccatg cgcgcggggt ggtgcaccgg gacatcaagc ccgacaacat
     1141 catcgtcatc ggcggggtgg ccgtggtcct cgacttcggg gtgtcgaagg cactggcggt
     1201 gtcggcgacc gttcccgccg acggcctcac cggcgcagga ctcgccatcg gcacgccccg
     1261 ctacatggcg ccggagcagg tggtggccga ccccgacatc gatgtgcggg ccgacatcta
     1321 cgccctgggc gtcctcgcct acgagatgct gaccggcgca cccccgttcg tgggaaccga
     1381 ccccgtcaag attgtccggg cgcacctcac cgaaacaccc gccccggtgt catcccgccg
     1441 gcccgacatc ccgccggtgg tcgccgccat ggtgatgcgc tgcctcgaga agcaccggga
     1501 gcggcggccc gccagcgcga cggaggtact ggatctcctc gatgcggccg ccacaccgag
     1561 tctcgtcgcg agcacgtcgc tgggagccgc ggcgtcgcgc ggggtggcct gggcaacggc
     1621 ggcgctgctt cctgccctgg tctacctggc ggccgcgggc atcatgctcg ccggccttcg
     1681 ctggctggcg agccagggac acatcggcac gcgactggtg gtcttctccg tcatcctggc
     1741 gctcctgggg cttccagtgg tggtgggtgt ggggctgctg ctcggagtgc ggcgggcgga
     1801 gcggggttac tgagactcag ggcttcgctg aggccagtcg ggcgacgtag ccccgttctt
     1861 cgggcccgaa ccatggtggt gcgccggctg ccgcgttctg gtccacccgc tcgggtctcg
     1921 acgtcgccgg aatggcgacg tgacagcgag gatcgctcag gatccacttg agcagcgcct
     1981 gcggccaggt cgttaccccg aacggcgcga gcggatggag tgctgcactc gccggagtgc
     2041 ggcggaggag cgcgccttcg gcaaaggggc gcatgatcac gacgcccagc ccaagctcgt
     2101 tcgccaacgg caggatttcg cgctcggcat cccgctcgat cggattgtag gggatctgta
     2161 tggccgcgat ccttccccag gaccatcccc acgctccatg gttgccgact gctccatgat
     2221 agcgatctac cgccccgagc aggcgctctg tgtcatgcca tccgcgcgac cggctcggac
     2281 cgaggacgcc gctcccgggt gcgggtggag cgccgcgcag tgatcgcctc gacgatccgg
     2341 cgcgcatccc ggcccacgcc attcaccgtg gccgaggtgg cgctgtacag gaagttgagt
     2401 cccacgaagt agaatcccgg cgcggcgtcc acgatgccgg cccggtgttg cgggtcgcga
     2461 ttggcgtcga agatcggcag atcgatccac tcgttggccg gctcgaagcc ggtgcaccag
     2521 acaacattcc tcacatcgag cactcggccg tcctcgagga gcggctgccc attctgagcc
     2581 ccgaccacgc gtggaacccg ctccaccccc gcggcgatga ggtcgccggg cttgatccgc
     2641 accagcggtg tggccgcgtg cagtcgcccg ggccgggcct tgcgtccaat cggggtgccg
     2701 agggacagca cgtggtggcc gatgaagcgg accaggtgca cgaagaggta tcgcgccgcc
     2761 ggggtctcga tccggaaggg gatgtggccg acgtcgcggc cggcgagtag cgtggcgcgg
     2821 gagtcgatca ggtccatcgc gatgtcggcg ccggaattgc ctgccccgac caccagcgcc
     2881 gagccggggg cgagctgggc gggattgcgg taggtggtcg agtggaactg gcggatgacg
     2941 ggatccagct ggcgcgcgaa ggccggtatc cgcggcttct gatagttgct catcgccacc
     3001 acgacctgct cggcgtggat ggtgccggca gtgctttcga ccaggaactc gcccccttgc
     3061 cggcggacca gcgtgacccg ggtcttgagc cggaccggta attggaagcg tttcgcgtag
     3121 cgctcgaggt aatcacccat ctggtccttg gtgggccagg tgaacgcggg accggggaag
     3181 cgcatgcccg gcaggccgtc gtagaaggat ggactgaaga gtcggagcga gtcccaccgc
     3241 tcccgccagg cgtcgcccac ccggacgccg gcatcgagta tgacaaaggg gattccggcc
     3301 cgctccaggt agtacccggt ggcgagccca gcctgtcctc ctccgatcac cacaactgga
     3361 attcgttcgg tccggcgcat cggtgtctcc ttcggtgtaa ttgtgccgga acacgatagg
     3421 aagacagggc gcaggccgca tcgggcgaat tcgccatgcg cggcctgcgc agcccatggg
     3481 tacttctatg tagtggtgga aatcaggcgg tgctggtacg cgtaggcggt cgccgcggac
     3541 cggctcgaga gattgagctt gctgaagatg ttgctgacgt ggcgggcgac ggtcttctcg
     3601 ctgatgccca gccgctcgga gatcgcccga ttggtgtgcc cgccggccag catggtgagc
     3661 acctcgagct cccgcgccgt cagccctccg ccggccgcgg tggccggcgc gacctgggcg
     3721 gcgaggcgcg tcaggtcgtg gtgcgcgccc aggtcggcga aggcccgccg ggccgattgc
     3781 agctcgatcg cggccgcgtc ggtgtcgccc tccttctgac agccctgtgc caccagcacc
     3841 gcgacccggg cggcgtgata gggcatgccc agctcgcgcc agagcccgcg ggcgtgccgc
     3901 agctccgcga gggcctcgga gcagcgatcc tgtgcgccca ggaccatgcc ccgcgcctgg
     3961 gcggccgcgg cctcgaggta ccgggcgccg gattcctccg caatcccgcc gagctccgcg
     4021 gcccactgtt cggccgcgga gagatccggt tcagcgagcg cgatctccac tgcggcgctg
     4081 agcagcgccg accgggcccg tggcccgtgg gcagcagtca gtgcccgccg aatggactgg
     4141 cccgcctggc cgacgcggcc ctgcgccagc cggagcagcg cgagccccgg ctcaggctgc
     4201 aggcctcgcg tgcccgcctc gtggtaggcc cgctccgcct cggccatctc cccctgctgc
     4261 cggtacacct cgcccagctg ataccaggcc agcgccgccg cgcgatccgg ctggttggcg
     4321 cacgcctccc gcgccgcgct ctccgcttcg agccactcgc catgcagcag caggatctcg
     4381 gagcgccgcg catgacacga gccgcggaag gcgaccagct ccggttggga gtcgcaccag
     4441 cgggccagtg cgagggtcca ctcctgggcc cgacggagat cgtacatctc gtggcaggct
     4501 tcgaggacgc tgcaatacag ctcgccggcg atgaccggtg aaacttcgtc ggtggtgacc
     4561 gccaccatca cttcgtcgag cagggcaact ccctccgcca cccggttgag ccggatcagg
     4621 gcccgcccct ggccgtggcg cgcgagaacc gcgagctcga catcgccgaa gcggttagcc
     4681 gtttccgctg cgtgactgaa gtgggagtag gccgcagtgg cgtctccgcc gaaaaaggcg
     4741 cggattgcca tgggcaattc gaggtaaccc agctcgacac actcctggcc atgttcttcg
     4801 agcagccgct tcgcccgcgc cagccagccg ttcgactggg ccgattgccc ctggaactcg
     4861 agcaggaacg cgagccagat cgcacagcgg gatgctgcct cgcgctggcc agcctctaga
     4921 aatgcctggt gggcacggat gagcaggtcg aaccgttccg gttcgcggcc gctgaggtgg
     4981 gccgagtgcg agaggagcgt gagatcttcg ggggagaggg gatggctgcg gccggcaagc
     5041 tgcagcgcgt gatacgcctg gttccaggcg cggcgctggt acagggcctg gccgtcggcc
     5101 accgtggggg gagcttgcgg ttcttccatc ggtctcttcc agcagccccc gaaatgggag
     5161 cgtgacgacg gaagatacca tcgggcccaa gcgcggttcg ttcgagttcg tctcactctg
     5221 gaactacagg gccatggatg tcgtagacag agggaacagt tgccctgatt tcggcccgac
     5281 ccgggtaacc cgaaatcctc cctgcacagc gagacctaca tgttctactg gcaggacctc
     5341 cggtatgccc tgcgcctgtt ggcgaggcag ccgctcttca ccctcctgac tgtcgcggtg
     5401 ctggccggcg ggcttggcct gtcgatcttc accttctcct tcctccacac cgcgatgctc
     5461 aaaccgttgc cggtgcccgg gggagaacgc atcgtccgcc tgctggcccg ttccggcccc
     5521 aacggcgcgc cgctcgaagc ggctgacatc gcggcgatgc ggacccaggt caccacgctc
     5581 agcgatatcg gcgtctttgc ggcgcgcgat ctggtggtgg gaaccggcga aggcagccgg
     5641 gtgattcggg cgaccgcgag cgagtggagc atcttcgagg tgacccacac ccgcccggcc
     5701 attggcagga gtttcacacc cgatgatcag aggcccggct ccgagccggt gatgattctg
     5761 acccattggg cctggcgggt actcttcggc gccgacagcg gtgtgatcgg gaagacagtt
     5821 cccatcaacg gagtgtcgac ccgggttgtg ggtgtgatgc cggatgggtt cggcttcccg
     5881 gtcgcatccg aagcgtgggt gccgatcgaa acggaatttc tgcggttgcc agttccactg
     5941 gaccgtcagg tggaggcgta tgcccggctg gcgccgggcg cgacgccggc gcgcgccgaa
//
LOCUS       DATIFF010000437         3354 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_58107, whole genome shotgun sequence.
ACCESSION   DATIFF010000437 DATIFF010000000
VERSION     DATIFF010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3354
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58107"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            15..995
                     /locus_tag="VLD58_06625"
     CDS             15..995
                     /locus_tag="VLD58_06625"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: protein motif:HMM:NF015047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HSB54010.1"
                     /translation="MPEPVGATALTRHAGIEIPLICGAMYPCSNPELVAAVSEAGGIG
                     IVQPISLTYVHGHDFREGLRLIRRLTSKPIGMNALIEQSSKSYHERMTRWIDIALEEG
                     VRFFVTSLGNPRWVVERVGQVGGVVYHDVTERKWAEKGLAGGVQGLIAVNNRAGGHAG
                     GKSVEALIEELRPLGVPVVCAGGIGDPAGFRAALDLGYAGAQLGTRFIATTECRASEA
                     YKRAIVAAGEDDIVLSERITGVPVAVIRTPYIDRMGLRAGPIARWMLRHRRTKHLMRT
                     IYALRSLWQLKRASLDESGEKDYWQAGKSAGVIDRIEPVAEIMKGFRAVL"
     gene            complement(1155..2327)
                     /locus_tag="VLD58_06630"
     CDS             complement(1155..2327)
                     /locus_tag="VLD58_06630"
                     /EC_number="4.3.1.15"
                     /inference="COORDINATES: protein motif:HMM:NF006058.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008838 - diaminopropionate ammonia-lyase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopropionate ammonia-lyase"
                     /protein_id="HSB54011.1"
                     /translation="MTSKWAGLCEESGSGVLLPNPHYRPGFTTPPPSPAARSFHRTLP
                     GYRPTHLVSLPATARRLGLGAVWLKNESGRLGLPAYKVLGAVWATWRVLQRRLGLGQW
                     ESLEQLRVKLTASPRLKLVTATDGNHGRGVARTARWLGCDAEVYVPAGTVTSRIEAIR
                     SEGACVIEVDGTYDVAVAAADAVRGDNVLQIQDHGFPGYEEIPQWVAEGYQTIFAEAD
                     EQLAELGGSVPDVVVVQIGVGTLASAVVRHYRREGLAHRPVLVGVEPTGAACVLRSIA
                     AGEPVMLEATAHSSIMAGLNCGTPSSAAWPDLRDGIDAFVAVEDELARQAMRELAAAG
                     IVAGESGAAGLAGLDELMTNHAGAARERLGIGPASRVLLISTEGATDPVAYREIVT"
     gene            2444..>3354
                     /locus_tag="VLD58_06635"
     CDS             2444..>3354
                     /locus_tag="VLD58_06635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54012.1"
                     /translation="MYRIRSASGNEVSYNSLEEFSAAVRRGEVHPEDEIFHTRANRWL
                     DVKSHPHYRSATTWHGHEPAAAATAPRAPSSGNASAPAASRPASTPATSTSRAQVFER
                     PVVRTAPQTTVRPQLQPQAAAPAPAPVAEPPAPKVEAAAPAKPEEPARPRKSKELAFI
                     DVGDVPGTKPVSGKVPALKLEPEIDEPEPTPAPIAQAPTPAVPVAKAPAPAPAPAPAP
                     AAPAPKSAAAPAAPSVPVAAKPAPAPAPTPAPAAPAAPAAPETEAEFLVMDGGIESPV
                     RTSAGYKTVPEDLGLLFDAPLPQTDAAP"
BASE COUNT          560 a         1207 c         1105 g          482 t
ORIGIN      
        1 cgagccggtg ccgaatgcct gagcccgtcg gcgccacagc gctcacccgc cacgccggca
       61 tcgagatacc gctcatctgc ggcgcgatgt acccctgcag caacccggag ctggtggccg
      121 cggtctcgga ggccgggggc atcgggatcg tgcagccgat ctccctcacc tacgtgcacg
      181 gccacgactt ccgggaagga ctccggctca tccggcgcct gacctcgaag ccgatcggga
      241 tgaacgccct gatcgagcag tcgtccaagt cctatcacga gcggatgacc cggtggatcg
      301 acatcgcgct ggaggagggg gtccggttct tcgtgacctc gctcggcaat ccgcgctggg
      361 tggtcgagcg ggtgggacag gtcggtggcg tggtctatca cgatgtgacc gaacggaagt
      421 gggccgagaa ggggctggcg ggaggagtgc aggggctgat cgcagtcaac aaccgggcgg
      481 ggggccacgc cggcgggaag agcgtcgaag cgctgatcga ggaactgagg ccgctcggcg
      541 tcccggtggt ctgcgccggc ggcatcggag atccggcagg attccgggcc gcgctggacc
      601 tgggctacgc cggcgcccag ctcggcaccc gcttcatcgc caccaccgag tgccgcgcga
      661 gtgaggccta caagcgcgcc atcgtcgcgg ccggggaaga cgacatcgtg ctgagcgagc
      721 ggatcacggg agtgccggtc gcggtgatcc ggaccccgta catcgatcgc atggggctca
      781 gggcggggcc gatcgcccgg tggatgctcc ggcaccgccg caccaagcac ctgatgcgga
      841 ccatctacgc cctgcgttca ctctggcagc tcaagcgcgc ctccctcgac gagagcgggg
      901 agaaggacta ctggcaggcc ggcaagagtg ccggggtcat cgaccggatc gaacccgtgg
      961 ccgagatcat gaagggcttc cgcgcggttc tctgactact gcggcaactg catacacaga
     1021 taaccgcggg atgagaacgg atgcccgccc ctcctcaaac ccactcccgc aacgcaaaca
     1081 ggcctgagca ctgccgaacc ttccgtgcga cggacctgac atccgtaccc atcggtggca
     1141 tctgtgtatg cagttcaagt aacgatttcc cggtaggcga ccggatcggt cgcgccttcg
     1201 gtggagatga gcagcacccg gctcgccggt ccgataccaa gccgttcccg cgctgctccc
     1261 gcatggttgg tcatcagctc gtcaagaccg gcgagtcccg ccgctcccga ctcgccggcc
     1321 acgattcccg ccgccgccag ctcccgcatc gcctgacggg caagttcgtc ttccaccgcg
     1381 acaaacgcgt cgatcccgtc gcgcaggtcg ggccaggcgg cgctcgaggg cgtgccgcag
     1441 ttgagccccg ccatgatgga gctgtgcgcg gtggcttcga gcatgaccgg ttcgcccgcg
     1501 gcgatcgagc ggagcacgca ggcggcgccg gtcggctcca ccccgaccag caccggacga
     1561 tgggcaagac cctcacggcg atagtgccgg actactgcgc tggccagcgt ccccaccccg
     1621 atctgtacca ccaccacatc cgggactgac ccgcccagct cggcgagctg ttcgtccgcc
     1681 tccgcgaaga tcgtctggta tccctccgcc acccactggg gaatctcctc gtagcccgga
     1741 aagccgtgat cctggatctg gaggacgttg tcgccgcgca ctgcgtcggc cgcggccacc
     1801 gcaacgtcgt aagtgccatc gacctcgatg acgcaggcgc cctccgagcg aatggcctcg
     1861 atccggctcg tgaccgtccc cgccgggacg tagacctccg cgtcgcaccc cagccagcgg
     1921 gcggtgcggg ccacccctcg gccgtgattg ccatcggtgg cggtcaccag cttgagccgg
     1981 ggcgaggccg tcagcttcac gcggagctgc tcgagggact cccactggcc cagacccagc
     2041 cggcgctgca gcacccgcca ggtggcccac actgccccga gcaccttgta ggccgggagg
     2101 cccaatcgtc ccgattcgtt cttgagccag acggcgccga gaccgagccg gcgggccgtg
     2161 gccggaaggg agacgaggtg ggtgggccgg tagcccggca gggtccggtg gaagctcctg
     2221 gcggcggggg aaggaggggg agtcgtaaac cccggccgat aatggggatt ggggaggagg
     2281 accccggagc cagactcctc gcataatccc gcccatttac tggtcatttt gccaccgtaa
     2341 attgcttcaa gtgccaacag gacaacaagt tatataccgg gcctgagtgt tgcattgaat
     2401 gacagtggac cagtattgca ccgcgctcgg aggagggaaa cccatgtacc ggatccgatc
     2461 ggcctcaggg aacgaggtct cctacaactc gctggaagag ttcagcgcag cggtgcgccg
     2521 gggagaagta caccccgaag acgagatctt ccatacccgt gccaaccggt ggctcgatgt
     2581 gaagagtcac ccgcactatc gcagtgcgac tacctggcat ggtcacgagc ccgctgccgc
     2641 ggcgaccgcg ccgcgcgctc cttcgtcagg caacgcttcg gctcccgcgg cctccaggcc
     2701 ggcgtccacc ccagccacga gcacttcgcg agcccaggtc ttcgagcgcc cggtggtccg
     2761 caccgcgccc cagaccaccg ttcgtcctca gcttcagccc caggccgctg cgcctgcgcc
     2821 cgcacccgtg gccgagccgc cggcgcccaa agtcgaggct gccgctcccg ccaagccgga
     2881 ggagccggcc cgtccccgga agagcaagga gctggcgttc atcgacgtgg gcgatgtgcc
     2941 tggcaccaag ccggtttccg ggaaggtccc ggcgctcaag ctcgagcccg aaatcgacga
     3001 acccgaaccc acgcccgctc cgattgcgca ggcgccgacc cctgcggttc cggtcgcgaa
     3061 ggcgccggcc ccagctccgg ccccggcccc agcaccagcc gctccggccc ccaagtccgc
     3121 cgctgcccct gccgctccat cggtgcccgt cgctgccaag cccgcgcctg cacctgcgcc
     3181 cacgccggcg ccagccgctc ccgctgcgcc ggccgcaccg gagaccgaag ccgagttcct
     3241 cgtgatggat ggtggcatcg aatcgccggt gcgcacctcg gccgggtaca agacggtgcc
     3301 ggaagacctg ggcctgctct tcgacgctcc gctgccgcag accgatgccg cacc
//
LOCUS       DATIFF010000438         1716 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1442103, whole genome shotgun sequence.
ACCESSION   DATIFF010000438 DATIFF010000000
VERSION     DATIFF010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1716
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1442103"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..339
                     /locus_tag="VLD58_06640"
     CDS             <1..339
                     /locus_tag="VLD58_06640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54013.1"
                     /translation="DIPLPPDMAKMMGVPALIGICVPRMGMHALPTTEIERKDAFSGS
                     MVIGYYKGKPIFIEPMVSKAMLMEKKSFDLPIPEVPGLVGAQATRFHAEWDAKQQAYR
                     FTFSGFSSAT"
     gene            complement(413..>1716)
                     /locus_tag="VLD58_06645"
     CDS             complement(413..>1716)
                     /locus_tag="VLD58_06645"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="asparagine synthase-related protein"
                     /protein_id="HSB54014.1"
                     /translation="LDFLAYGFVPDPKCIWEQCAKLAPGHCMVVRTGADGGPQVQEPR
                     AWWDWSFNPEPSERDWTGRILGTLTGAAREMAIADVPLGVFLSGGVDSSSVVAALAQG
                     GKRVKTFTIGFDDAAFDERKWARAVAERYGTEHHERVLEPHDADAALQSLMWHFDEPF
                     GDHSFLPTYCLAVETGKEVIVALSGDGADETFAGYRRYSRTMRRVGVRRFLPDRLLAR
                     VARAADRRLHPAGRIRRLSAKYGYDPAAMLTGIFTTGLTASALEAHARGPLAAAARHY
                     HPREAITRLMRQAPPDRVGLVNTLRYIDFKHALAGDILVKVDRACMAVALEVRPVYLH
                     RDMLDLASAIPGAQLAGRKHTKETLKVAMESWLPAGNIRRGKQGFLAPMSRWLEQTDG
                     GGWTGAAGSVLPELLDHAPLPRDAFQLLLLDRWLARWQPVA"
BASE COUNT          266 a          616 c          580 g          254 t
ORIGIN      
        1 gacatccccc tcccgcccga catggcgaag atgatgggcg tgcccgccct gatcggcatc
       61 tgcgttccgc gcatgggaat gcatgcgctg ccgacgacgg agatcgagcg gaaggacgcg
      121 ttcagcggca gcatggtgat cgggtactat aaaggaaagc cgatcttcat cgagccgatg
      181 gtctccaagg cgatgctgat ggagaagaag tcgttcgacc tccccatccc cgaggtcccg
      241 gggctcgtcg gcgcgcaggc gaccaggttc cacgccgagt gggatgccaa acagcaggcg
      301 taccggttca ccttctcggg gttcagctcc gccacctgag cgataatctg tggaaatgtg
      361 gctccccccc tcattctccc gccgactctg cgggaggatg ggggggcgac ggttacgcca
      421 ccggctgcca ccgcgccagc cagcggtcca gcagcaggag ctggaacgcg tcgcgcggca
      481 gcggcgcatg gtcgagcagc tcgggcagca cgctgccggc agccccggtc cacccgcctc
      541 cgtcggtctg ctcgagccag cggctcatgg gggcgaggaa tccctgcttg ccgcggcgga
      601 tgttgccggc cggcagccag ctttccatgg ccaccttcag cgtctccttg gtgtgcttgc
      661 gtccggcgag ctgcgcgccg gggatcgcgg aggctaggtc cagcatgtcg cgatggagat
      721 agaccggccg gacctcgagc gcgacggcca tgcatgcccg gtccaccttg accaggatgt
      781 cccccgccag cgcgtgcttg aagtcgatgt agcgcagcgt gttgaccagc ccgacccggt
      841 ccggcggcgc ctgccgcatc agccgggtga tcgcctcgcg cgggtgatag tgccgggccg
      901 cggcggcgag cggcccccgc gcatgggcct ccagcgccga cgccgtcagc cccgtggtga
      961 agatccccgt cagcatggcc gccggatcgt acccgtactt cgccgagagc cggcggattc
     1021 ggccggccgg atgcagacgg cgatcggcag cgcgggccac ccgcgccagc agccggtcgg
     1081 gcaggaaccg ccgcaccccc acccggcgca tggtccggct gtaccggcga tagccggcga
     1141 aggtctcgtc cgccccatcc cccgacaacg cgacgatcac ctcttttccg gtctccaccg
     1201 ccaggcaata ggtgggaaga aacgagtggt cgccgaacgg ctcgtcgaag tgccacatca
     1261 ggctctggag cgcggcgtcg gcgtcgtgcg gctccagcac ccgctcgtga tgctcggtgc
     1321 cgtaccgctc cgcgacggcg cgggcccact tccgttcgtc gaaggccgcg tcgtcgaatc
     1381 cgatggtgaa cgtcttcacc cgtttgccgc cctgcgccag cgccgccacc accgacgacg
     1441 agtccacccc gccactcagg aagacgccga ggggcacgtc ggcgatcgcc atctcccggg
     1501 ccgcgccggt gagcgtgccg agaatccggc cggtccagtc tcgctcgctc ggctccgggt
     1561 tgaaactcca gtcccaccac gcgcgaggct cctggacctg gggcccgccg tcggcgccgg
     1621 tgcgcaccac catgcagtgg cccggcgcca gcttggcgca ctgctcccag atgcacttgg
     1681 gatcggggac gaaaccgtag gcgaggaagt cgagca
//
LOCUS       DATIFF010000439         1900 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_58140, whole genome shotgun sequence.
ACCESSION   DATIFF010000439 DATIFF010000000
VERSION     DATIFF010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58140"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1713
                     /locus_tag="VLD58_06650"
     CDS             <1..1713
                     /locus_tag="VLD58_06650"
                     /inference="COORDINATES: protein motif:HMM:NF033527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3 family transposase"
                     /protein_id="HSB54015.1"
                     /translation="VRLRDLNTRRQRKVPPDAPVQFVPARWRPHVIGRDGEIDRHYYE
                     LCVLWELRAALRAGNVWLETSRRFADPETYLISRERWPRDRQDVCRLLQLPEDGSIRL
                     KQRRAELEEELSRLDRDWPQNESVRIEDGRLVLTPLSAEELPEGSVALQEKIARHLPR
                     VDLADLLVEVDGWTGFTRHFEHAGGREPRTKDLLVHLHAAVLAQACNFGPTTMAEVAE
                     LSYRRLAWCTNWYLREETLRPAIAAVVDFQHRQPLSRSWGGGTLSSSDGQRFPVPVRS
                     RAATALPRYFGYGQGLTFYSWTSDQFAQYGTKVIPATVRDATYVLDAILDNETELTIL
                     EHTTDTAGYTELVFALFDLLGMQFAPRIRDLGDQRLYRFDPGATYRHLGPLLKGKVHE
                     RRVLEHWDDLLRVAGSLKRGHVTASLLIGKLQASPRRNALTRALQEYGRVAKTLFVLR
                     YLGSEAYRRRIGVQLNKGESLHALRRFLFFAHQGQVRRGQPEDQANQASCLNLVTNAV
                     IAWNTVYMGAVIDRLKAKGERIAPEDLAHLSPARHDHINPYGHYQFRVDRWAGKKPLR
                     PIKV"
BASE COUNT          293 a          671 c          652 g          284 t
ORIGIN      
        1 gtcaggctcc gggatctgaa cacccggcga caacgcaagg taccgccgga cgccccggtc
       61 cagttcgtgc cggcgcggtg gcgcccccac gtcatcggcc gggacggcga aatcgaccgc
      121 cactactacg agttgtgcgt gctctgggag ctgcgggccg cgctgcgggc cggcaacgtc
      181 tggctggaga ccagccgccg gttcgccgac cccgagacgt acctgatctc tcgcgagcga
      241 tggcccaggg atcgccagga cgtctgccgc ttgctccagc tccctgagga tgggtcgatc
      301 cggttgaagc aacgccgggc cgagctggag gaagagctgt cccggctcga ccgggactgg
      361 ccgcagaacg agtcggtgcg aatcgaggat ggccggctgg tgctcacccc gctctcggcc
      421 gaggagcttc ccgaggggag cgtcgcgctg caggagaaga tcgcccggca cctgccccgg
      481 gtcgacctgg ccgacctgct cgtcgaggtc gacggctgga ccggcttcac gcgccacttc
      541 gagcacgccg gcggccgcga gccccgcacc aaggacctgc tggtgcattt gcacgccgcg
      601 gtcctggcgc aggcgtgcaa cttcggcccg accaccatgg ccgaggtcgc cgagctgtcc
      661 taccgccgcc tggcctggtg caccaactgg tacctgcggg aggagaccct gcgcccggcc
      721 atcgccgcgg tcgtcgactt ccagcaccgc cagccgctga gccggtcctg gggcggcggc
      781 accctgtcct cgtccgacgg ccagcgcttc cccgtgcctg tccggagccg cgccgcgacc
      841 gctctgcccc gctacttcgg ctacggccag gggctgacct tttactcctg gacctcggac
      901 cagttcgcgc aatacggcac gaaggtcatc ccggccacgg tccgcgacgc gacgtacgtg
      961 ctcgacgcga tcctcgacaa cgagaccgag ctgacgatcc tggagcacac gaccgacacg
     1021 gccggctaca ccgagctggt cttcgcgctg ttcgacctgc tgggcatgca gttcgcgccc
     1081 cgcatccgcg acctgggcga ccagcggctc taccgcttcg accccggggc gacgtaccgc
     1141 cacctgggac cgctactgaa gggcaaggtc catgagcggc gggtcctcga acactgggac
     1201 gacctgctgc gggtggccgg gtcgctgaag cggggccacg tgaccgcctc gctgctgatc
     1261 ggcaagctcc aggcgagccc gcggcgcaac gccctgacgc gggccctgca ggagtacggc
     1321 cgggtggcca agacgctgtt cgtgctgcgc tacctcggca gcgaggcgta ccgccgccgg
     1381 atcggcgtgc agctgaacaa gggcgagtcg ctgcacgccc tgcggcggtt cctgttcttc
     1441 gcccaccagg ggcaggtgcg gcgggggcag cccgaggacc aggccaacca ggcgagctgc
     1501 ctgaacctgg tgaccaacgc cgtgatcgcc tggaacacgg tttacatggg ggcggtgatc
     1561 gaccggctca aggccaaggg ggagcggatc gcccccgagg acctcgcgca cctttcgccg
     1621 gcccggcacg accacatcaa cccgtacggg cattaccagt tccgggtcga ccgctgggcc
     1681 ggcaagaagc ccttgagacc catcaaggtg tgaaccatcc agccaaacgg agcgttggtt
     1741 tttgtccgtt tgctatccca aggcctaatc gcgtacttgg gcgatgagcc gggcgatatt
     1801 ggctttctcg gcgtcggtgc tgctgacgac cgagaggggc gcgccggtca gggtgtcgcg
     1861 gcggaccgca tccgcgtcga ttggtagcca gtagcgggct
//
LOCUS       DATIFF010000440         1723 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_981249, whole genome shotgun sequence.
ACCESSION   DATIFF010000440 DATIFF010000000
VERSION     DATIFF010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_981249"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..717)
                     /locus_tag="VLD58_06655"
     CDS             complement(<1..717)
                     /locus_tag="VLD58_06655"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSB54016.1"
                     /translation="MTRLSAFPPLRRPAFLLLLAACSSAPPADLVVFGKVWTGDSTRP
                     LAQAVATRGDTVVAVGDSATVARLVGPATEVLTNSGGLITPGFMDGHVHFLSGGYQLS
                     SVDLRSADSPEEFIARLKAFAAERAPGEWILGGDWDHERWPGTPLPRREWIDSVTPRN
                     PVFVSRLDGHMALANSLALKAAGMTRATADIPGGAIVRDSRTGEPTGVLKDAAMGPVN
                     AVIPDYTPAQDDAALARAMQY"
     gene            complement(738..929)
                     /locus_tag="VLD58_06660"
     CDS             complement(738..929)
                     /locus_tag="VLD58_06660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54017.1"
                     /translation="MRPRDQILANLEATYREQYDRAKADGQARRMEELDAGYQRDQLM
                     LEVLLDIRDLLGDRPRLPA"
     gene            1094..>1723
                     /locus_tag="VLD58_06665"
     CDS             1094..>1723
                     /locus_tag="VLD58_06665"
                     /inference="COORDINATES: protein motif:HMM:NF015535.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P1 family peptidase"
                     /protein_id="HSB54018.1"
                     /translation="MSAQQKPRARDLGIPFLGNPGPLDAITDVAGVEVGQVTLIQGEG
                     KLVPGKGPVRTGVTAIFPRGRESSDPVMAAWFTLNGNGEMTGTTWVEESGFLWGPVTI
                     TNTLSVGVVRDAVVAWAIRRRYDEFLWALPVTAETWDGGLNDINGMHVRPEHVFQALD
                     GARGGPVAEGNVGGGTGMVCHQFKGGIGSASRRLSASAGSYTVGVLVQCN"
BASE COUNT          267 a          572 c          614 g          270 t
ORIGIN      
        1 gtactgcatt gcgcgcgcga gcgccgcgtc gtcctgcgcc ggggtgtagt ccgggatgac
       61 ggcgttcacc ggccccatgg ccgcgtcctt cagcactccc gtaggctcgc cggtgcggct
      121 gtcacgcacg atggctcccc cggggatgtc ggccgtagcg cgggtcatgc cggcggcctt
      181 gagcgccagg ctgttcgcca gcgccatgtg cccatcgagg cggctcacga acacgggatt
      241 cctgggcgtc accgaatcga tccactcgcg ccgcggcagc ggagtgccgg gccagcgctc
      301 gtggtcccag tccccaccca ggatccattc ccccggtgcg cgctcggccg caaaggcctt
      361 gagtcgcgca atgaactcct ccggcgaatc cgcgctccgg agatccacgc tggaaagctg
      421 gtagccgccc gagaggaaat ggacgtgccc gtccatgaag ccgggggtga tcaggccgcc
      481 gctgttcgtg agcacctcgg tggctggccc aaccaggcgg gccaccgtgg cgctgtcgcc
      541 gaccgccacc accgtatctc cccgggtagc caccgcctgc gcgagcggcc gggtggaatc
      601 gccggtccac accttgccga acaccacgag gtcggccggc ggcgcgctcg agcaggccgc
      661 cagcaggagt agaaaggcgg gacgacggag aggcgggaag gcggagaggc gggtcacgaa
      721 aactcctcgg tgattcttca ggcgggcagc ctcgggcgat cgcccagcag gtcgcggatg
      781 tcgagcagca cctcgagcat gagctggtca cgctggtatc cggcgtccaa ctcctccatt
      841 cggcgcgcct gcccgtcggc cttcgcccgg tcgtactgct cccgataggt cgcttcgagg
      901 ttggcgagga tctggtcgcg ggggcgcatg aggccggact cgtcggattc gctgaatgga
      961 ggatgggaac agatggcggg gtggttctgg ccgcgccaat gcgcatgtag cttacagtaa
     1021 ccccacccac catgccacca tgtgccgacc gggccgcctc ttcctcccta ttttcctcct
     1081 ctccgtctct gtgttgtcgg ctcagcagaa gccccgggcc cgggacctgg gcatcccgtt
     1141 cctgggaaac ccgggaccac tcgatgcgat caccgacgtg gcgggcgtgg aagtcggtca
     1201 ggtgacgctg atccagggtg aaggaaagct ggtgccgggc aaggggccgg tgcggaccgg
     1261 ggtcaccgcc atcttcccgc gcggaagaga gagcagcgac ccggtgatgg ccgcctggtt
     1321 cacgctgaac ggcaacggcg agatgaccgg gaccacgtgg gtggaggaaa gcgggtttct
     1381 gtggggtccg gtcaccatca ccaacacctt gagcgtcggt gtggtacggg atgcggtggt
     1441 cgcatgggcc atccggcggc gctacgacga gtttctctgg gccctgccgg tgacggctga
     1501 aacctgggac ggcgggctca acgacatcaa cggcatgcac gtccgccccg agcacgtatt
     1561 ccaggccctc gacggggccc gcggcggccc ggtggcggag ggcaacgtcg gcggcggcac
     1621 ggggatggtc tgccaccagt tcaaaggcgg catcggcagt gcctcgcgcc ggctgtccgc
     1681 ttccgcgggg agctacacgg tcggggtgct ggtgcagtgc aac
//
LOCUS       DATIFF010000441         5822 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_58342, whole genome shotgun sequence.
ACCESSION   DATIFF010000441 DATIFF010000000
VERSION     DATIFF010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5822
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58342"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..929
                     /locus_tag="VLD58_06670"
     CDS             <1..929
                     /locus_tag="VLD58_06670"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HSB54019.1"
                     /translation="PATLDPTILTGVLRDSLKFDGMIVTDALDMAGVVNAYGAGEAAV
                     RAFIAGSDLLLMPADPAGAVNAVVEAVETGRISYERLDRSVRRLIWMKRRLGLFARRT
                     VPLDSVPEVVGNARFLQTARDVAQRSVVLVSDSGGAVDSLRARPRNIALVTYGEENAY
                     TVGNSMLRQLRAAGHTVNVFRLFAASGPASFDSVKTLVRKTPYTVFALSVKVTTAKGT
                     ISLPEPVAKLVNLLSSRPRTVVVSIGSPYVGLQTPRARSYLIAWSASGLTEWAAARAL
                     SGQAAISGHLPVSLPPKYQVGHGLMRPLATTP"
     gene            929..2122
                     /locus_tag="VLD58_06675"
     CDS             929..2122
                     /locus_tag="VLD58_06675"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HSB54020.1"
                     /translation="MRRFAVLLVLAAGCAHPASPAPAFPRWASVTALLDSAIAAGAAP
                     GAVLGVSYGGVHRFYGTGRLGLDDPTRPDSSTIYDLASLTKVIGLTTAVMMAVNEGRL
                     AVDSPVVRYVPLFGADSSQPIRRSVTLRHLLTHASGLPAFRLLYKETATRAEALALTD
                     TTRLDTLPGTRYVYSDLGAIILTQAVQAAYSERIDSLLAARVFGPLQMNDTRYLPPAN
                     WLPRIAPTENDPWRGHVIRGEVHDENAARLEGVSGHAGLFSSARDLLVFGDWLVRDWT
                     SDKGGPTSCGGGIPASATWPSIPQIKVFAQRQDLPPGSDRALGWDTPSATGSSAGRMF
                     SRRSIGHTGFTGTSIWIDPDRCLVVVLLSNRVHPTRENQKWGPVRGLIADRVVEALGE
                     GGLKR"
     gene            2236..2604
                     /locus_tag="VLD58_06680"
     CDS             2236..2604
                     /locus_tag="VLD58_06680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HSB54021.1"
                     /translation="MESTDQQVASPGFVLTLSDRAAEEVKKFMVAEQVQAEVGGLRVS
                     VLPGGCSGFKYSLNIEENSLEDDTVMSINGVRVFVDGFSMQYLNGVTVDYTSSMQGSG
                     FTFHNPNATGGCGCGSSFTA"
     gene            2831..4297
                     /locus_tag="VLD58_06685"
     CDS             2831..4297
                     /locus_tag="VLD58_06685"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HSB54022.1"
                     /translation="MTLGVGAWVSRNQRTAGDYFLGARDLPAWAILLSIVATETSALT
                     VISVPAVAARGDLTFLQLPMGYLVGRIVVAFWLLPGYFTGEQETAYARLEHRFGPATR
                     RVTSGIFLVTRALADGVRVYAGAIPLALLARWYGPDGALPAWNIPAAIVVMSLVTLLY
                     TWHGGLKAVVWVDVMQLCVYLAGGVVALHIASDLAGGLGPTLAQAGSAGKLRLFDWTI
                     SFTHTYTFFGGLIGGGMLSAASHGTDHLIVQRLLASRGLKSARIALIGSGVVVLVQFT
                     LFLFIGIAIWAAGFAPETIPADQVFPRFVVDHFPTGLGGLMVAAVLAASMATHSSAIS
                     ALASSITHDFYAGWTGRTDPAHLLKVGRAWSLIWGVLITVVALLFHLIAGGGQTPVVV
                     FALSIASITYGGLLGAYLLAGGPRWVRGRDVITAIAITVAIMLVVFFAKALSTVPALT
                     WLAPAATLAWPWYVPLGSAITVASGLGLGALGRKRMAA"
     gene            4294..5199
                     /locus_tag="VLD58_06690"
     CDS             4294..5199
                     /locus_tag="VLD58_06690"
                     /inference="COORDINATES: protein motif:HMM:NF013986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BadF/BadG/BcrA/BcrD ATPase family protein"
                     /protein_id="HSB54023.1"
                     /translation="MTWIVGVDAGGTKTSVVVASDGGIVARSTGPGAKMRSGRGIGCA
                     ATIGEVVRRALAQAGRTRGDILIAGVAGAGREGERDELRQAFRSEALAERVIVTSDTE
                     MALAAAFGDRPGIVITAGTGSMGIARDPYGRMHRAGGYGWQMGDEGSGYALGRAALGA
                     VGRAADDRSPRTELTGLLLKMTRSESLDSLIQWAAAAGPAEVASLAPAVFDAAQQGDT
                     VAAGIMDYAARELAALALKLLPHFGVDERVPVEVATNGGLLFHDGPLYRSVKAKLSEE
                     PQIRFRDTPLEAAAGAMHLAGKTEK"
     gene            complement(5450..>5822)
                     /locus_tag="VLD58_06695"
     CDS             complement(5450..>5822)
                     /locus_tag="VLD58_06695"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HSB54024.1"
                     /translation="KVHPRFKTPYIGTIITGIFVATFAAFANIAEVVDLTNIGTLFAF
                     ILVSVGVIVLRKTDPNRPRPFRVPWVPVTPLISVVACFYLMYKLPGITWIRFGIWLAV
                     GLVLYFLYGINHSRLRNRASV"
BASE COUNT          919 a         1928 c         2022 g          953 t
ORIGIN      
        1 cgcccgctac gctggatccc acgattctca ccggagtgct ccgtgactcg ctcaagttcg
       61 acgggatgat cgtcaccgat gcactcgaca tggcgggcgt ggtgaacgcc tatggcgcgg
      121 gcgaggcggc ggtgcgggcc ttcatcgccg gctccgacct gctgctcatg ccggccgatc
      181 ccgcgggcgc agtcaacgcg gtggtcgagg cggtggagac cgggcggatc agctatgaac
      241 ggctcgaccg ctcggtcagg cgtctcatct ggatgaagcg ccggcttggc ctgttcgccc
      301 gccggacggt gccgctcgac agcgtgccag aggtcgtggg gaacgcccgc ttcctccaga
      361 ccgcgcggga cgtggcccaa cgttccgtgg tgctcgtgag tgacagtggc ggcgcggtcg
      421 acagcctgcg ggcccggccc cgcaacatcg cgctggtgac ctacggcgag gagaacgcct
      481 acacggtagg caactcgatg ctgcgccagc tccgggccgc ggggcacacg gtcaacgtct
      541 tccggctgtt cgcggccagc gggccggcca gcttcgattc ggtgaagacc ctggtgcgga
      601 agacgcccta taccgtgttc gcgctgtcgg tgaaggtcac caccgcgaaa gggaccatca
      661 gcctcccgga gccggtcgcc aaactggtca atctcctgag cagccggccg cggacggtgg
      721 tcgtgtcgat cgggtcgccc tacgtcggac tccagacacc gagggcccga tcctacctga
      781 ttgcgtggag cgcgagcggc ctcaccgagt gggccgcggc gcgggccttg tcgggccagg
      841 cggcgatcag cggacacctc ccggtgagtc tcccgcccaa ataccaggtt ggccacgggc
      901 tgatgcggcc gctcgcgaca acaccctgat gcggcgattc gcggtgttgc tggtgctggc
      961 tgcaggctgc gctcaccctg ccagtcccgc accggcattc ccccgttggg cctccgtcac
     1021 cgcactgctc gactctgcca tcgccgcggg cgcggcgccc ggcgctgtgc tgggggtgag
     1081 ttacggcggc gtgcatcgtt tctatggcac cgggcgcctg ggtctggatg acccgacccg
     1141 tcccgacagc agcaccatct acgatctcgc ctcgctcacc aaggtgatcg ggctgacgac
     1201 ggccgtgatg atggcggtga acgagggaag actggcggtg gattcgccgg tggtgcgcta
     1261 cgtcccgctc ttcggcgccg attcgagcca gcccatacgc cggagcgtca cccttcgtca
     1321 tctgctcacc catgcaagtg gactccccgc cttccgcctg ctttacaagg agacggcgac
     1381 ccgcgccgag gcgctggcgc tcactgatac gacaaggctc gatactctcc ccggcacgcg
     1441 ctacgtctac tcggacctgg gcgcaatcat cctgacccag gcggtacagg cggcgtacag
     1501 cgagcggatc gattcgctgc tggccgcccg agtcttcggg ccgctccaga tgaacgacac
     1561 ccgctacctg ccgcccgcga actggctgcc gcggattgcg ccgaccgaga acgatccctg
     1621 gcggggacat gtgatccggg gcgaggtgca cgacgagaac gcggcgcggc tggaaggagt
     1681 ctcggggcat gccgggttgt tcagctccgc ccgggacctg ctggtcttcg gagactggct
     1741 ggtgagggac tggacctccg acaagggcgg tcccaccagt tgcggtggcg gaatccccgc
     1801 ttcagcaacc tggcccagca tcccgcagat caaggtcttc gcccagcgcc aggatctccc
     1861 tcccggttcc gatcgcgcac tcgggtggga tacgccttcg gccaccggga gcagcgcggg
     1921 acggatgttc tcccgccgga gcatcggcca caccgggttc accgggacct cgatctggat
     1981 cgaccccgac cgctgcctgg tggtggtcct gctcagcaac cgggtgcatc ccactcgcga
     2041 gaaccagaag tgggggccgg tccggggcct gatcgccgac cgggtcgtcg aggcgcttgg
     2101 tgaaggcggg cttaagcgtt gatgcagatt cacttacgcc atccctgacc agcggcgccg
     2161 gattgacata ggtacctgcg ggtccgtact ttccagcagt gattcgactc ctcgtgtggg
     2221 agaaagggca aaacaatgga aagcactgac cagcaggtcg cgtctccggg cttcgtcctg
     2281 acgctgagcg atcgtgcggc cgaagaggtc aagaagttca tggtagcgga gcaggtgcag
     2341 gccgaggtgg gtggccttcg ggtgagcgta ctgccgggcg gctgctcggg cttcaagtac
     2401 agcctcaaca tcgaagagaa ctccctcgag gacgacaccg tgatgagcat caacggcgtg
     2461 cgggtcttcg tggacgggtt cagcatgcag tacctgaacg gtgtcaccgt cgactacacc
     2521 tcgtcgatgc agggctcggg cttcaccttc cacaacccga acgcgacggg cgggtgtggg
     2581 tgcgggagca gctttactgc ctaggccgga ggctggaggc aggaggccgg agcaatccgg
     2641 cacggggcgg gcgccaacgg gcacccgccc tttttcgttg cactgattcc agttacccta
     2701 ggggcacgcg gaactgcggg caccgcctcg gtgactcccg cctccggcct ccggcctccg
     2761 gccctctaac cctgacaacc aactccccct ggcacccctc gacctcgccg tcatcgtcgt
     2821 ctatttcgcc ctgactctcg gggtcggcgc ctgggtctcc cgcaatcagc gcacggcggg
     2881 cgactacttc ctcggtgcgc gcgacctgcc ggcctgggcc atcctcctct cgatcgtggc
     2941 gacagagacc tcggcgctca cggtcatctc ggtccccgcc gtcgcggcaa ggggcgatct
     3001 tacctttctc cagctgccga tggggtacct ggtcggccgg atcgtggtcg cgttctggct
     3061 cctccccggc tatttcaccg gggaacagga gacggcctac gcccgcctcg agcatcgctt
     3121 cgggcccgcc acccgccggg tgacgtcggg catcttcctg gtgacccggg cgctggccga
     3181 tggagtgcgg gtctacgccg gcgcgattcc gctcgcgctg ctcgcccgct ggtacgggcc
     3241 ggacggggcg ctccccgcct ggaacatccc cgccgcgatc gtggtgatga gcctcgtcac
     3301 cctgctctac acctggcatg gcgggctcaa agcagtggtg tgggtcgacg tgatgcagct
     3361 ctgcgtgtat ctcgcgggtg gagtggtggc gctccacatc gcgagcgacc tggcgggggg
     3421 gctcggcccc acgctggcgc aggcgggcag cgccggcaag ctgcggctct tcgactggac
     3481 catcagcttc acccacacct acaccttctt cggcgggctg atcggcggcg ggatgctctc
     3541 ggccgcatcg cacggcaccg atcatctcat cgtgcagcgg ctcctcgcga gccggggcct
     3601 caagtcggcg cggatcgcgc tgatcggctc gggcgtggta gtgctggtcc agttcacgct
     3661 cttcctgttc atcggcatcg cgatctgggc ggcgggcttc gcgccggaga cgattcccgc
     3721 ggaccaggtc ttcccccgct tcgtggtgga tcacttcccc accgggttgg gcgggttgat
     3781 ggtggccgcg gtgctcgccg cgtcgatggc cacgcacagc tcggcgatca gcgcgctggc
     3841 gagctccatc acccacgatt tctacgccgg ctggaccggc cgaacggacc cggcccatct
     3901 tctcaaggtc gggcgggcct ggtcgctcat ctggggcgtg ctgatcacgg tggtggcgct
     3961 gctgtttcac ctgatcgcgg gtgggggaca gacgccggtg gtggtgtttg cgctgtcgat
     4021 cgcctcgatc acctatggcg ggctcctcgg cgcctatctg ctggcgggag gcccgcggtg
     4081 ggtacggggg cgtgatgtga tcacggcgat cgcgataacc gtcgccatca tgctggtggt
     4141 gttcttcgcc aaggcgctga gcactgtgcc cgcactcacc tggctggctc cggcggcgac
     4201 cctggcctgg ccctggtatg tcccgctcgg ttcggcgatc acggtagcga gcggactggg
     4261 actgggcgcg ctgggccgga agaggatggc ggcatgacct ggatcgtggg agtggatgcc
     4321 ggcgggacca agacctcggt cgtcgtcgcc agcgacggcg gcatcgtcgc gcggagcacc
     4381 gggcccgggg ccaagatgcg cagcgggcgc gggatcgggt gcgccgcgac gatcggcgaa
     4441 gtcgtgcgcc gggccctggc ccaggccgga cggacccggg gggacatcct gatcgcgggt
     4501 gtcgccgggg cgggccgcga gggtgaacgg gatgagctcc gccaggcctt ccgcagcgaa
     4561 gcgctggccg agcgggtgat cgtgacgagt gatacggaga tggcgctggc ggcggcgttc
     4621 ggcgaccggc ccggcatcgt gatcaccgcg ggcaccggca gcatgggaat cgcgcgcgac
     4681 ccgtacgggc ggatgcaccg cgcggggggc tacggctggc agatgggcga cgagggaagc
     4741 ggctacgccc tgggccgggc ggcgctggga gcggtgggcc gcgcggcgga cgaccggagc
     4801 ccgcggaccg agttgaccgg cctgctcctc aagatgaccc ggagcgaatc gctcgactcc
     4861 ctgatccagt gggcggccgc cgccggtcct gcggaggtag cgagcctggc gccggcggtg
     4921 ttcgacgcgg cccagcaggg cgacacggtg gctgcgggaa tcatggacta tgccgcccgc
     4981 gagctcgcgg ccctggcgct caagctgctc ccgcacttcg gagtcgacga gcgggtgccg
     5041 gtcgaggtcg cgaccaacgg gggcctgctc ttccacgacg ggccgctcta ccggagcgtg
     5101 aaggcgaagc tcagcgagga accccagatc cggttccggg atacgccact cgaagcggcg
     5161 gcgggggcaa tgcacttggc ggggaagaca gagaaatagg aattcaccgc agaggcgcag
     5221 agtcgcggag ggccgcagag ggtacatcgc accacccagc tcacctcacc aaaccagcac
     5281 ccagatcaag aagacaaaac caaaaacaaa aaccataaga agaaataaag aaatgaacca
     5341 caatcaccag gttcgtgatt gtggttctgg gttcaatggt tgcctgacgc cgaaacctct
     5401 gcggccctct gcgcctccgc gcctctgcgg tgaactgcct aaccgtcctt tacaccgaag
     5461 cccggttccg caaacgcgag tgattgatcc cgtacaggaa gtacagcacc aatcccaccg
     5521 ccagccagat cccgaaccgg atccaggtga tccccggcag cttgtacatc aggtagaaac
     5581 acgccaccac cgagatgagc ggagtgaccg gcacccacgg tacccggaag ggccgaggcc
     5641 ggttggggtc ggtcttgcgg aggacgatga caccgaccga gaccaggatg aaggcgaaga
     5701 gggtcccgat gttggtcagg tccaccacct ccgcgatgtt cgcgaaggcg gcgaaggtgg
     5761 ccacgaagat cccggtgatg atggtgccga tgtatggcgt cttgaaccgg ggatgcacct
     5821 tg
//
LOCUS       DATIFF010000442         1530 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1749534, whole genome shotgun sequence.
ACCESSION   DATIFF010000442 DATIFF010000000
VERSION     DATIFF010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1749534"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            110..>1530
                     /locus_tag="VLD58_06700"
     CDS             110..>1530
                     /locus_tag="VLD58_06700"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB54025.1"
                     /translation="MPYVEGESLRDRLTREKQLPIPDAVRFAIEVAEALDYAHQQGVI
                     HRDIKPENILLHDAQALVADFGIALAASRAEGGSRMTETGMSLGTPHYMSPEQAMGER
                     NLDARTDVYALGCVLYEMLTGEPPFTGPTAQAIVARVMTEVPRSVTLQRKAVPPHVEA
                     AVLTALEKLPADRFATAAEFLTALGDTSRRTAPGGSGAAAGTSRMRRAVPWVVALLAL
                     GVAGVSMRRLAQVPVSAPLRFTLAPHGADVSSGGGLTTSPDGRTIVYAASVAGVQRLY
                     RRTLDNPLAVPLIGTEGVREAAFSPDGRWVLFSSADDRIKKIPVEGGTVVSLVRTTAP
                     AGITWSAGIGPVFGMPSFSRDYHGLTSVPERGDTGLHLLTSGNGPPRAGADSTRGGGG
                     GMDHEPFALQDGRTVLFSHHNRGGAQLGVLSLADKRMTLLDLPVETIVGLADGVLLYL
                     DNDESLMAVEFDAGRRRLSGAPIR"
BASE COUNT          216 a          518 c          558 g          238 t
ORIGIN      
        1 cgattcgggg atggcgacgg tcgagggtcc ggggtcaagg gtcgaaaacc cgtcgccagg
       61 cccatcctcg accctcgacc ctcgaccctc gacctgcttc tactacgtca tgccgtacgt
      121 cgaaggggag agtctccgcg accggctgac ccgggagaag cagcttccca tccccgacgc
      181 ggtgcgattc gccatcgagg tcgccgaagc cctggactac gcccaccagc agggagtgat
      241 ccaccgggac atcaagccgg agaacatcct gctccacgac gcgcaggcgc tggtggccga
      301 cttcggcatt gcgctggcgg cgagccgcgc cgagggtggc agccggatga ccgagaccgg
      361 gatgagcctc ggcacgccgc actacatgag ccccgagcag gcgatggggg aacggaacct
      421 cgacgcccgc accgatgtgt atgcgctcgg gtgcgtgctg tacgagatgc tcaccgggga
      481 gcccccgttc accggcccga ccgcacaggc gatcgtggcc cgggtgatga ccgaggtgcc
      541 gcggagcgtg acgctgcagc ggaaggcggt gccgccgcac gtcgaggcgg cggtgctcac
      601 cgcgctggag aagcttcccg ccgatcggtt tgccacggcc gcggagtttc tgaccgcgct
      661 gggcgacacg tcgcgccgca ccgccccggg cgggagcggg gctgccgcgg gcacttccag
      721 gatgcggcgg gccgttccct gggtggtggc cctccttgcc ctgggtgtcg ccggcgtatc
      781 gatgcgccgc ctggcgcagg taccggtctc ggctccgctc cggttcacgc tcgctccgca
      841 cggggcggat gtcagcagcg ggggcgggct caccacctcg cccgacggcc ggacgatcgt
      901 ctacgccgcg agcgtcgcag gggtccagcg gctgtaccgc cgtacgctcg acaacccgtt
      961 ggcggttccc ctgataggca cggagggggt ccgtgaggcg gcgttttctc ccgatggccg
     1021 ctgggtcctc ttctccagcg ccgatgaccg gatcaagaag attccggtgg aaggggggac
     1081 ggtcgtttcc ctggtgcgga cgacggcgcc ggcggggatc acctggagcg cggggatcgg
     1141 tccggtcttc gggatgccgt ccttctcgcg ggattatcac gggctcacct cggtgcccga
     1201 acggggggat accgggctgc acctgctcac gtcggggaat ggaccgccgc gtgccggggc
     1261 cgattcgact cgcggagggg gcgggggcat ggaccacgag cccttcgccc tccaggatgg
     1321 ccggaccgtg ctgttctcgc accacaatcg tggtggtgcg cagctcggcg tcctctctct
     1381 cgcggacaag cgcatgaccc tcctggacct gccggtcgag acgatcgtgg gtttggccga
     1441 cggagtgctg ctctacctcg acaacgatga gagcctgatg gcggtggagt tcgatgccgg
     1501 gcggcgccgg ctctccggcg cgccgatccg
//
LOCUS       DATIFF010000443         1207 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_365218, whole genome shotgun sequence.
ACCESSION   DATIFF010000443 DATIFF010000000
VERSION     DATIFF010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_365218"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1207)
                     /locus_tag="VLD58_06705"
     CDS             complement(<1..>1207)
                     /locus_tag="VLD58_06705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSB54026.1"
                     /translation="ILRMQDAELKKFPEVAHVWGKAGRAETATDPAGLDMFETTITLK
                     PERDWRPGLTYDRLVAEMDSAVRLPGVTNAWTMPIKGRIDMLATGIRTPVGIKVFGPD
                     LAELERLGKAIEQAVQGVPGTRSAFAERAVSGYYLDIDIDRAAAARHGLNVGDVQTVI
                     ATAVGGMTITQTVEGRERYGVRIRYPQELRDTPERLAAVLIPVAHGTGGQATAMGSGM
                     AAAAAAAPAGREAYVPLGQVASIRQVAGPMVVRTEDAMPTAWVYVDVAGRDIGSYVAD
                     AQRMVQSMVTLPPGYRIVWSGQYEYMQRAAARLTLVIPATLLIILLLLYLNFRSVGET
                     LIVMLSLPFALVGGIWFLWLLGYNWSVAVAIGFIALAGVAAETGVVMLIYLDHAWAAR
                     KADGRASLRG"
BASE COUNT          180 a          452 c          387 g          188 t
ORIGIN      
        1 cccccggagc gacgcccgcc cgtcggcttt gcgggcggcc catgcgtggt cgaggtagat
       61 cagcatcacc acgccggtct ccgcggctac gccggccagg gcaatgaagc cgatcgcgac
      121 cgccaccgac cagttgtagc cgagcagcca caggaaccag atcccgccta ccagcgcgaa
      181 cggaagcgag agcatcacga tcagggtctc gcccacgctc cggaagttga ggtagagcag
      241 caggaggatg atcagcaggg tggctgggat gacgagtgtg agcctggcgg ctgcccgctg
      301 catgtactcg tactggccgc tccacacgat ccggtatccc ggcggcagcg tgaccatgga
      361 ctggaccatc ctctgggcat ccgccacgta gctcccgatg tctcgcccgg ccacatccac
      421 gtagacccag gccgtgggca tggcgtcctc ggtgcggacc accatcggcc cggccacctg
      481 ccggatgctc gcgacctgtc ccagcgggac gtacgcctcc ctgccggccg gtgctgcggc
      541 cgcggcggcc gccatgccgc tccccattgc ggtcgcctgc cctccggtgc cgtgcgccac
      601 agggatgaga accgcggcaa ggcgttcggg cgtgtcgcgc agctcctggg gatagcggat
      661 ccggaccccg taccgctccc ggccctcgac ggtctgggtg atcgtcatgc cgccgaccgc
      721 ggtcgcgatc accgtctgga catcgcccac gttcaacccg tgccgcgcgg ccgcggcgcg
      781 gtcgatgtcg atgtccaggt agtagcccga taccgcccgc tccgcgaagg cgctgcgggt
      841 ccccggcaca ccctgcaccg cctgctcgat ggccttcccc agccgctcca gctcggccag
      901 atcgggaccg aacaccttga tccccaccgg agtacggatg ccggtggcca gcatgtcgat
      961 ccgccccttg atcggcatgg tccaggcatt ggtgacgccc ggcagccgca ccgccgaatc
     1021 catctccgcc acaagccggt cgtaggtcaa ccccggccgc cagtcccgct ccggcttgag
     1081 cgtgatcgtg gtctcgaaca tgtcgagccc cgctgggtcg gtggcggtct cggcgcgtcc
     1141 ggccttgccc cacacgtggg ccacctcggg gaatttcttc agctcggcgt cctgcatcct
     1201 caggatt
//
LOCUS       DATIFF010000444         1243 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1288863, whole genome shotgun sequence.
ACCESSION   DATIFF010000444 DATIFF010000000
VERSION     DATIFF010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1243
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1288863"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..805
                     /locus_tag="VLD58_06710"
     CDS             <1..805
                     /locus_tag="VLD58_06710"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HSB54027.1"
                     /translation="IDAPLVRRWLVDFIRDEIVRRRGFKKVVIGLSGGVDSSLVAYLA
                     VEALGRENVLGVRMPYRTSSPESLEHAQLVIDTLGIPSVTVDISAAVDGLVAAIGGET
                     DPARKGNIMARARMITLFDLSAVHQALPLGTGNKTERLFGYFTWHADDSPPVNPIGDL
                     FKTQVWALARHLGVPDVIVAKPASADLIRGQTDEGDFGISYPKADGILHWLLLGYRPA
                     EVAAFGYTAAEVELVRKRLESTHWKRRLPTVAMLSQTAIGEFYLRPVDY"
     gene            902..>1243
                     /locus_tag="VLD58_06715"
     CDS             902..>1243
                     /locus_tag="VLD58_06715"
                     /inference="COORDINATES: protein motif:HMM:NF015048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HSB54028.1"
                     /translation="MSPESRPMSYSRGEISTFVMPHMQNVLGDLFGGQLMSLVDQAAA
                     VAAIRHAGGPAVTASIDRVDFRERIPVGALVTCLGMVDYVGNSSMDITVEVYAENPSS
                     GEKRHTHTAHVV"
BASE COUNT          192 a          417 c          438 g          196 t
ORIGIN      
        1 gatcgacgct ccgctcgtcc gccgctggct ggtggacttc atccgcgacg agatcgtccg
       61 ccggcgcgga ttcaagaagg tcgtgatcgg gctctccggc ggcgtggaca gctcgctcgt
      121 ggcctacctc gcggtggagg cgctcggccg ggagaacgtg ctgggtgtcc ggatgccgta
      181 ccggacctcg agcccggaga gcctggagca cgcgcagctc gtgatcgaca cactgggcat
      241 ccccagcgtc acggtggaca tcagcgccgc ggtggacggg ctcgtggccg cgatcggcgg
      301 agagaccgac ccggcccgca aggggaacat catggcgcgg gcgcggatga tcacgctgtt
      361 cgatctttcc gcggtccacc aggcgcttcc gctcggtacc ggcaacaaga cggagcgcct
      421 gttcggctac ttcacctggc acgcggacga ctcgccgccg gtgaatccga tcggcgacct
      481 gttcaagacc caggtctggg cgctggcgcg gcacctgggc gtgccggacg tgatcgtcgc
      541 gaagccggcg agcgcggacc tcatccgcgg ccagaccgac gagggcgact tcggcatctc
      601 ctatcccaag gccgacggaa tcctgcactg gctgctgctg ggctaccgtc cggcggaggt
      661 ggctgctttc gggtatacgg ccgccgaggt ggagttggtc cgcaagcggc tcgagtccac
      721 ccactggaag cgccggctcc ccaccgtggc catgctcagc cagacggcga tcggggagtt
      781 ctacctgcgg ccggtggatt actgacgggg tgagaggtaa gaggtaagag ggggcatcgg
      841 gagccggccc ccagcccctc ctgcctctta cctcttacct ctgacctgcc cggagccccg
      901 catgtccccg gaatcccgtc ccatgtccta ctcccgcggc gagatctcca cgttcgtcat
      961 gccccacatg cagaacgtgc tcggcgatct gttcggcggg cagttgatgt cgctggtgga
     1021 ccaggcagcg gccgtggcgg cgatccggca cgcgggcggc ccggccgtca cggcgagcat
     1081 cgaccgggtg gacttccgcg agcggatccc cgtgggcgcg ctggtgacct gcctggggat
     1141 ggtggactac gtgggcaact cctcgatgga catcacggtc gaagtgtacg ccgagaaccc
     1201 gagcagcggg gagaagcggc acacccacac cgcgcacgtg gtg
//
LOCUS       DATIFF010000445         1063 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1749704, whole genome shotgun sequence.
ACCESSION   DATIFF010000445 DATIFF010000000
VERSION     DATIFF010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1749704"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..450
                     /locus_tag="VLD58_06720"
     CDS             <1..450
                     /locus_tag="VLD58_06720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSB54029.1"
                     /translation="SAVGLPLSVENVVMRARSIEVTLKGGMDAMAEFAIASNPNVAGR
                     LKLDPGARQEIFDYYRMLTPIGYANALRALLQMDYITERLPEISAPTLLVCGDEDPSL
                     APMRVMEKKIKQARFVLLSPAGHFANRDQPEAFNRAVLEFLDEIGPA"
     gene            complement(404..862)
                     /locus_tag="VLD58_06725"
     CDS             complement(404..862)
                     /locus_tag="VLD58_06725"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSB54030.1"
                     /translation="MPKRYNQSCPVAKSLEVIGDRWTLLVVRDLLRGTQRFQDLLSTL
                     PGIAPNILSARPKLMEEHGLIAREFYSEHPPRAQYALTDKGRELGMVVGALAAWGGRH
                     VHRQTRLVHTGCGHPVSVGYYCPDCGEGVRGADVAVTRARSRRGTRAPRG"
BASE COUNT          171 a          368 c          367 g          157 t
ORIGIN      
        1 tccgcggtgg ggctgccgct gtcggtcgag aacgtggtga tgcgggcgcg ctcgatcgag
       61 gtcacgctca agggcggcat ggacgccatg gccgagttcg ccatcgcgtc gaacccgaac
      121 gtggcgggcc gactcaagct cgatccggga gcccggcagg agatcttcga ctactaccgg
      181 atgctgaccc cgatcggcta cgccaacgcg ctccgtgccc tgctccagat ggactacatc
      241 accgagcggc tgcccgagat ctcggcgccc accctgctgg tctgcggcga cgaggatccg
      301 tcgctcgccc cgatgcgggt gatggagaag aagatcaagc aggcgcggtt cgtgctgctc
      361 tcgccggccg ggcacttcgc caaccgggat cagccggagg ccttcaaccg cgcggtgctc
      421 gagttcctcg acgagatcgg gcccgcgtga ccgcgacgtc cgcgccccgc accccttccc
      481 cgcagtccgg gcagtagtag ccgaccgaga ccgggtgccc gcacccggtg tgcacgagcc
      541 gggtctgcct gtgcacgtgg cggccgcccc acgcggcgag cgcgcccacc accatgccca
      601 gctcccgccc cttgtcggtg agcgcgtact gggcgcgcgg cgggtgctcg gagtagaact
      661 cccgcgcgat cagcccgtgc tcctccatca gcttcgggcg cgcggacagg atgttggggg
      721 cgatgccggg cagggtggag aggaggtcct ggaagcgctg ggtgccgcgc aggaggtcgc
      781 gcaccaccag cagggtccag cggtccccga tgacctccag ggacttggcc accgggcagg
      841 actgattgta gcgcttcggc acggaggcag tatagcgggc ctcttgacaa attagcaagt
      901 gactattatt ttacaagtca caccaaagga gaggcccgat gccgaagcac atcgacatga
      961 tccggcagat ccagcgcggc gaggcgccgc cgcccccggt cgcgaccctg atcgggttca
     1021 ccctcgccga ggtcgagccc gggcgcgcgg tggtcaccct cga
//
LOCUS       DATIFF010000446         2560 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1749770, whole genome shotgun sequence.
ACCESSION   DATIFF010000446 DATIFF010000000
VERSION     DATIFF010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2560
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1749770"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1383)
                     /locus_tag="VLD58_06730"
     CDS             complement(<1..1383)
                     /locus_tag="VLD58_06730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54031.1"
                     /translation="MRPPARLTRFLLSALFLVPPLHATDLKDLAREYVRSYAASSRAH
                     ARIPSFSRQTGLACNVCHTSFPQLTTFGRMFKLNGYTLTGLQLVTAGDSGKRQILKLD
                     LIPPVSAMVVSSLTQTRKDQPGTQNGNVEFPQELSLFFGEAITPKLGTFVQLTYEGQS
                     GSIGIDNVDLRFANHGHLAQKVLTYGVSLNNNPTVQDVWNSVPAWGFPFMASGVAPTP
                     SAAALLDGGLGQQVAGLGGYGLWDNHLYGEFSVYRSAAQGGHNPPDAGSTNTIHGVAP
                     YWRAFYEQRWGAQSLMVGTLGMSTSLYPEGVTGLRNRFTDIAFDAQYERGLGKGNMTA
                     HAIYIHEKQKLDADVESGAAENATNTLKTLRVDASAYTASRIGFTLGVFSTSGDADPL
                     RYPTETLSGSAIGSPNSNGVLAEISALPWLNTRFTIQYVLYNKFNGGTHNYDGAGRDA
                     KDNNTLYLMSW"
     gene            complement(1514..1957)
                     /locus_tag="VLD58_06735"
     CDS             complement(1514..1957)
                     /locus_tag="VLD58_06735"
                     /inference="COORDINATES: protein motif:HMM:NF042610.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6789 family protein"
                     /protein_id="HSB54032.1"
                     /translation="MNVRRAVTAGFVGTAVITALWLIEPKVGLGHLAVGDILSSLLAL
                     ATAYASLGPAPGWILHFAVGVTLALIYAALFARRLPGSPMGRGLLYGGLIFILAQVVF
                     MPLVGAGLFSRGDPALLAGSLLGHLVYGGLVGVIYAGGELTAGRA"
     gene            2123..2500
                     /locus_tag="VLD58_06740"
     CDS             2123..2500
                     /locus_tag="VLD58_06740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54033.1"
                     /translation="MNPWQRLRLIAVIVALAATVWLGVRDGMDSLHGARGSLQTATAV
                     TQILYGVLAVAALAALLARPRWIRPALAAWVAMLVLTGAAAPVVWGGADWWVGVLSAG
                     VTLLLAGLVALGALAHVRGRGLR"
BASE COUNT          393 a          814 c          930 g          423 t
ORIGIN      
        1 ccagctcatg agatagagcg tgttgttgtc cttggcgtca cgtcccgccc catcgtagtt
       61 gtgggtgcct ccgttgaact tgttgtacag gacgtactgg atggtgaacc gggtattgag
      121 ccacggcagc gcggagattt ccgccagcac gccgttgctg ttggggctgc cgatggcgct
      181 gccggaaagg gtctccgtcg gatagcggag cgggtcggca tccccggagg tggagaacac
      241 gccgagcgtg aacccgatgc gggacgcggt atacgccgag gcgtcgacgc ggagcgtctt
      301 gagggtgttc gtcgcgttct cggccgcccc cgactcgaca tcggcatcga gcttctgctt
      361 ttcgtggatg tagatggcat gggcggtcat gttgcccttg ccgaggccgc gctcgtactg
      421 cgcatcgaac gcgatgtcgg tgaaccggtt ccggaggccc gtcacccctt cgggatagag
      481 cgaggtgctc atgccgagcg ttcccaccat cagactctgg gctccccagc gctgttcata
      541 gaacgcccgc caatagggcg ccaccccgtg aatggtgttc gtcgagccgg catcgggcgg
      601 gttgtgaccc ccctgcgcag cggagcggta gacgctgaat tcgccgtaga ggtgattgtc
      661 ccagaggccg tagccgccga ggcccgcgac ctgctgtccg aggcccccgt cgaggagcgc
      721 cgccgcgctc ggcgtgggcg ccactcccga ggccatgaag gggaatcccc aggccggcac
      781 gctgttccac acgtcctgca ccgtcgggtt gttgttgagc gagacgccgt acgtcagcac
      841 cttctgggcg aggtgcccgt ggttggcgaa ccgcaggtcc acgttgtcga tcccgatgct
      901 gccggactgt ccctcatagg tcagctggac gaaggtgccg agcttcggcg tgatggcctc
      961 gccgaagaag aggctcagct cctgggggaa ctccacgttc ccgttctggg tgccgggctg
     1021 atccttgcgg gtctgggtca gcgacgacac caccatcgcc gagaccgggg gaatgaggtc
     1081 gagcttgagg atctggcgct tcccgctgtc gccggccgtc accagctgca agccggtcag
     1141 cgtgtagccg ttcagcttga acatccggcc gaaggtggtc agctgcggaa agctggtgtg
     1201 gcagacgttg caggcgagcc cggtctgcct ggagaagctc ggaatccgcg cgtgcgcccg
     1261 ggatgatgcg gcgtagcttc tgacgtattc gcgggcgaga tccttcaggt cggtggcgtg
     1321 gagcggcggt acgaggaaca gggcggagag caggaatcgg gtcaggcggg ccggcgggcg
     1381 catagggggt cccggtgggg gaagtgatcg ggaggccgaa gccgcgcctc acgaatcggc
     1441 gtgaatcacc gctccgcggt gatgaagaat tcgagaaaca gcggtgaaac ctccccgggt
     1501 caccccggaa tggtcaggcc cgaccggcgg tcagttcacc gccggcatag atcacgccca
     1561 cgagtccgcc gtagacgaga tggcccaata ggctcccggc cagcagcgcc ggatcaccgc
     1621 gagagaagag accggccccg acgaggggca tgaagacgac ctgggcgagg atgaaaatca
     1681 gtccaccata cagcaatccg cgccccatgg gggacccggg cagccggcgg gcgaacagcg
     1741 cggcatatat aagggcgagc gtgacgccga cggcgaagtg gaggatccag ccgggcgcgg
     1801 gtcctaacga ggcatacgcg gtggccaggg ccaggaggct gctcaggatg tccccgacgg
     1861 ccaggtggcc gaggccgacc ttcggctcga tcagccagag ggccgtgatg accgcggtgc
     1921 cgacgaaacc tgccgtgacc gcccgcctga cgttcatgcg ctgctccgga cccaccgagc
     1981 gaggtgtccg ctcctgcgtg tggcgctcaa ggccacgcgc caagttagcg gttacggccg
     2041 cgccaacaag aggcccgggt ggcgggtggc gccttttcgg cggcaacgca tatttcccgg
     2101 cgagtgccgg ccgatcggac cgatgaatcc ctggcagcgc ctccgactca tcgccgtgat
     2161 cgtggcgctc gccgccaccg tgtggctcgg cgtccgcgac ggaatggact ctctccacgg
     2221 ggcgcggggc tcgctgcaga ccgccacggc ggtaacgcag atcctgtacg gggtgctcgc
     2281 cgtggccgct ctcgccgcct tgctcgcccg gccccgctgg atccggccgg cgctcgccgc
     2341 ctgggtcgcg atgctggtcc tgaccggcgc ggcggccccg gtcgtctggg gcggggcgga
     2401 ctggtgggtc ggggtcctga gcgcgggggt gacgctgctc ctcgcggggc tcgtggcgct
     2461 gggtgcgctg gcccacgtgc ggggcagggg gttgcgttag gcatgcggac gcattcgcct
     2521 ctgtgccgtc ctgccgtcct gccgtcctgc cgtcctgccg
//
LOCUS       DATIFF010000447         1028 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2058568, whole genome shotgun sequence.
ACCESSION   DATIFF010000447 DATIFF010000000
VERSION     DATIFF010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2058568"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..994)
                     /locus_tag="VLD58_06745"
     CDS             complement(<1..994)
                     /locus_tag="VLD58_06745"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HSB54034.1"
                     /translation="MNAFGVTFPGIPGIVLGCNTRICWGATTNEMDVTDVYQEKLVLD
                     PGSGLPVATTFEGKPEPLTIIPQTYLVNQPGNGTPDDLVNAGVGPLAGGVTLVVPRRN
                     HGPIVAVDLSDPANPIGLSVQYTGWGPTRELDAFRTWNRAASLDEFKQGLQYFDFGSQ
                     NLSYADVDGNIAYFTSGELPLREDLQTLGAPDGGIPPFLIRDGTHTLKHEWLPAGSAP
                     EPGQAIPYQILPSAEMPQTVNPQQGYIFNANNDPVGTSTDNDPLDQFRHDGGVFYLGI
                     GYDRGYRAGQIRRQLEATLKKDGAFTMQDFERIQANNQLLDAQALVPYLAAAFDN"
BASE COUNT          139 a          311 c          402 g          176 t
ORIGIN      
        1 cgttgtcgaa ggcggcggcg agatagggga ccagggcctg ggcgtccagg agctggttgt
       61 tggcctggat gcgctcgaag tcctgcatgg tgaaggcgcc gtccttcttc agcgtcgcct
      121 cgagctgccg ccggatctgg ccggcgcggt agccgcggtc gtagccgatg ccgagataga
      181 agacgccgcc gtcgtggcgg aattggtcga gcggatcgtt gtcggtgctc gtccccaccg
      241 gatcgttgtt ggcgttgaag atgtacccct gctgcgggtt caccgtctgg ggcatctccg
      301 cggacgggag gatctgatag gggatggcct gcccgggctc cggggcggag ccggcgggga
      361 gccactcgtg cttcagcgtg tgggtgccgt cgcggatcag gaacggcggg atgccgccgt
      421 cgggcgcgcc gagggtctgg aggtcctcgc gcagggggag ctcgccgctg gtgaagtagg
      481 cgatgttgcc gtccacgtcc gcgtaggaga ggttctgcga gccgaagtcg aagtactgga
      541 gcccctgctt gaattcgtcg aggctcgccg cccggttcca ggtccggaag gcgtcgagct
      601 cgcgggtcgg gccccagccg gtgtactgga cgctcaggcc gatcgggttc gccggatcgg
      661 agagatcgac cgccacgatc ggcccgtgat tgcgccgcgg gaccacgagg gtgaccccgc
      721 cggcgagcgg gccgaccccg gcgttgacga ggtcgtccgg cgtgccgttc cccggctgat
      781 tgacgagata ggtctggggg atgatcgtca gcggctccgg cttcccctcg aaggtggtgg
      841 cgaccgggag ccccgagccg ggatcgagca ccagcttctc ctgatagacg tcggtgacgt
      901 ccatctcgtt ggtggtggcc ccccagcaga tgcgggtgtt gcagccgagc acgatcccgg
      961 ggatgccggg gaaggtgacc ccgaacgcgt tcatcgccgg ccggccgtcg ccggcgatgc
     1021 ggagctgg
//
LOCUS       DATIFF010000448         1037 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_519900, whole genome shotgun sequence.
ACCESSION   DATIFF010000448 DATIFF010000000
VERSION     DATIFF010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_519900"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1020
                     /locus_tag="VLD58_06750"
     CDS             <1..1020
                     /locus_tag="VLD58_06750"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSB54035.1"
                     /translation="NIDTDLRVNKPQLTVHFDRDRAEDLGVPVADIAGTLQALLGGRK
                     VSTYTRDNKLYNVLVQLDPRERATPSDVSGLYVRGRDNQLVQLSAVTRVDEGVGPRQL
                     NHYNRIAAFTLDASLDPGFTLGEAIDSLNALAKEVLPKGSTTELAGESRELAESGGSL
                     YFAFGLALVVVFMVLASQFESLVHPLTVLLAVPLAVTGALLTLKLAGSTINLYSQIGM
                     ILLIGLVAKNSILLVDYANKLRERGMDTMTALLEAGRVRLRPILMTSVAVVMGAIPIA
                     LALGAGSISRRPLGYAIVGGVVFSTALTLFLVPVVYSLMEALRLRVTRARPHRAPAAV
                     TVEGE"
BASE COUNT          150 a          367 c          356 g          164 t
ORIGIN      
        1 aacatcgaca ccgacctccg ggtcaacaag ccgcagctca ccgtgcactt cgaccgcgac
       61 cgggccgagg atctcggagt gccggtcgcc gacatcgcgg gaacgctgca ggcgctgctc
      121 ggcgggcgga aggtcagcac ctacacccgc gacaacaagc tctacaacgt gctggtgcag
      181 ctcgatcccc gggagcgtgc caccccctcg gacgtctcgg ggctgtacgt gcgcgggcgg
      241 gacaaccagc tggtgcagct gagcgcggtg acccgggtgg acgaaggggt ggggccgcgc
      301 cagctcaacc actacaaccg gatcgcggcc ttcaccctcg acgcgagcct ggaccccggc
      361 tttacgctcg gggaagcgat cgattcgctc aacgcgctgg ccaaggaagt gctccccaag
      421 ggcagcacca ccgagctggc cggggaatcg cgcgagctgg cggagagcgg aggctcgctc
      481 tacttcgcct tcggcctggc gctggtggtg gtcttcatgg tgctggcctc gcagttcgag
      541 tcgctggtgc acccgctcac ggtgctgctg gccgtgccgc tcgcggtgac cggcgcgctg
      601 ctgacgctca agctcgcggg gtccaccatc aacctgtaca gccagatcgg gatgatcctg
      661 ctgatcggcc tcgtggcgaa gaactccatc ctgctcgtgg actacgccaa caagctccgc
      721 gagcggggga tggacaccat gacggcgctt ctcgaggcgg gccgggtgcg gctccgcccg
      781 atcctgatga cctcggtcgc cgtggtcatg ggcgcgatcc cgatcgcgct cgcgctcggc
      841 gccgggtcga tcagccggcg gcccctgggg tacgcgatcg tcggcggggt cgtcttctcg
      901 accgcgctca ccctcttcct cgtgccggtg gtctattccc tgatggaagc cctccgcctc
      961 cgcgtcaccc gggcccggcc gcaccgcgcg ccggccgcgg tgacggtgga gggggaatga
     1021 tcccgctgct cctggcc
//
LOCUS       DATIFF010000449         1382 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1289445, whole genome shotgun sequence.
ACCESSION   DATIFF010000449 DATIFF010000000
VERSION     DATIFF010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1382
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1289445"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..605)
                     /locus_tag="VLD58_06755"
     CDS             complement(<1..605)
                     /locus_tag="VLD58_06755"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HSB54036.1"
                     /translation="MTRAFPLIPLVLLAACGGHRPAPSSEPAPESAAQATPRAAPGRS
                     DAGVAAVTAGPATHLLPPAPELDSIIPAEELAAELRLASDSAADEAVLEALAEATPGE
                     GDPGVEAEDPKALAPVTWDIDVATYNSHDRVRWYLDFFQGKGRERMGIWLNRMPRYEP
                     MIRERLQREGLPGDLVYLALIESGFSNTATSRARAVGMWQF"
     gene            complement(787..1206)
                     /locus_tag="VLD58_06760"
     CDS             complement(787..1206)
                     /locus_tag="VLD58_06760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54037.1"
                     /translation="MSSPNPLSERLRFAEFVLDRLPNGRCRARVGLTWKDSEAFTGES
                     EGLASQAGELRCAAEACVKALGQAVEGGMGFELLGVKAVRAFDATVVIVSLAVQGEGS
                     GHRVVGSYLTENDAARGAALAVLNATNRILGNRLFMR"
BASE COUNT          211 a          495 c          485 g          191 t
ORIGIN      
        1 atgaactgcc acatccccac cgcgcgggcg cggctagtgg cggtattgga gaagccgctc
       61 tcgatcagcg ccaggtacac caggtcgccg ggaagccctt cccgctgcag ccgctcccgg
      121 atcatcggct cgtagcgcgg catccggttg agccagatcc ccatccgctc ccggcccttg
      181 ccctggaaga aatcgaggta ccagcggacc cggtcgtgcg agttgtaggt ggcgacgtcg
      241 atgtcccagg tgaccggtgc cagcgccttg gggtcctcgg cttcgacgcc ggggtcacct
      301 tcgccgggcg tggcctcggc cagtgcctcc agcaccgcct cgtcggccgc gctgtcgctc
      361 gccagccgca gctcggccgc gagctcctcg gccggaatga tcgaatcgag ctcgggggca
      421 ggcggcagga gatgggtcgc cgggccggcg gtgaccgccg ccacgccggc atcggaacgg
      481 cccggggcag cgcgaggcgt ggcctgggcg gccgactccg gggccggttc ggacgagggc
      541 gccggacgat gcccgccgca ggcggcgagc aggaccagcg gaatgagggg gaaggctcgg
      601 gtcatcaacg cgactcctga cgtgatcaga ccgtcccctg ccctacgggg cacggcctgc
      661 aaagctgccg ggcgaaggct ggagcgtcag cgacgtcccc cagaatgggg ggttcgggct
      721 cgcttcgggg tgcaacctgc cggaccccgc gcgttctgag gcagtcaggg ggtcgcggac
      781 ggccccttag cgcatgaaca accgattgcc caggatccgg ttagtggcat tcagcacggc
      841 gagtgccgcg ccgcgggccg cgtcgttttc ggtgaggtag gagccgacca cgcgatgccc
      901 gctcccttcc ccctgtacgg cgagagacac gatgacgacg gtggcgtcga aggcccgcac
      961 cgccttcacg ccgagcagct cgaaacccat ccccccctcc accgcctggc ccagcgcctt
     1021 gacgcatgcc tcggccgcgc agcgcagctc gccggcctgg gacgccagcc cctcgctctc
     1081 cccggtgaat gcctcggaat ccttccaggt gagccccacc cgcgcccggc accggccgtt
     1141 cggcaggcgg tccaggacga actccgcgaa gcgcaaccgc tcgctgagtg ggttcggcga
     1201 tgacatggcc gtccttggat ggcagcgacg tgagagggaa acggcgagag cggcaggggg
     1261 caagccctat gccaccctca ggcggtatcg aagcgtacct ccagctgggc cgtggcttcc
     1321 accacgggcc ggacgacatc cacctcgagc cggggtcgtc ccagcggatc ggtatccacg
     1381 gc
//
LOCUS       DATIFF010000450         1424 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_520211, whole genome shotgun sequence.
ACCESSION   DATIFF010000450 DATIFF010000000
VERSION     DATIFF010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1424
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_520211"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..215
                     /locus_tag="VLD58_06765"
     CDS             <1..215
                     /locus_tag="VLD58_06765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54038.1"
                     /translation="ASGDSASTTTPACPAGKRLASGGFSTNGSTNALFAQGTINPNGT
                     FSVSAYGFFGAAPQLTAYGYCLPARS"
     gene            complement(267..>1424)
                     /locus_tag="VLD58_06770"
     CDS             complement(267..>1424)
                     /locus_tag="VLD58_06770"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HSB54039.1"
                     /translation="AKLGPRVDKLSLPWAHSDEHRSPRFAAWGERLWRHPYRYGIPTV
                     AALVLLVIPVTQLKTAMPSIKVVPSGDSSRIGYQQVQAAFGPGATGPLQLVAPAGAAA
                     TTAATAQSDPGIAQVMPAERSGGLALIQAIPKQDPSSPEVGATIERLRADLPSGALVG
                     GAIAENHDLQAELSAKTPLVIGVVLALGFVLLLVALQAPLIAAVGVATNLLATGAAFG
                     VAKWIFQDGALHSLLGFESQGFLDAWAPVFFFAMIFAISMDYTVFLLSSAKEHWDRSH
                     DAKEAMVGGVAHSGRVIFAAGAVMVAVFFTFALSGPLPPKEMGLILGIAVLLDAMLIR
                     LLLMPVLLRLLGPRAWYLPRWAHRILPDVRFGHGEEVGLPHQVAATSGRPT"
BASE COUNT          243 a          488 c          519 g          174 t
ORIGIN      
        1 tggcgtcggg cgattccgcg agcacgacca cgccggcgtg cccggcgggc aagcgactcg
       61 ccagcggcgg gttcagcacg aacggctcga ccaacgccct gttcgctcag ggcacaatca
      121 acccgaacgg caccttctcc gtctcggcct acgggttctt cggcgcggcc ccgcagctga
      181 ccgcgtacgg ctactgcctg ccggccaggt cctagcggcc accagaccgc tccatctcgg
      241 agcggagggc ggggcccgga aacgacctac gtgggccggc cgctcgtggc cgcgacctga
      301 tggggaagcc cgacctcttc cccgtgcccg aagcggacgt ccggcaggat gcgatgcgcc
      361 cagcggggca ggtaccaagc ccgcggaccg agcagcctga gcaagaccgg catcagcagc
      421 agccggatca gcatcgcgtc gagcagcacc gcgatcccca ggatcaggcc catctccttg
      481 ggtggcaggg gcccggagag cgcgaaggtg aagaagacgg cgaccatgac cgcgcccgcc
      541 gcgaagatca cgcgcccgga gtgggcgacg ccgccgacca tcgcctcctt ggcgtcgtgg
      601 ctgcgatccc agtgctcctt ggccgaggag agcaggaaca ccgtgtagtc catcgagatc
      661 gcgaagatca tcgcgaagaa gaagaccggg gcccacgcat cgaggaagcc ctgggactcg
      721 aagccgagca gggagtgcag cgcgccatcc tggaagatcc acttcgccac gccgaaggcg
      781 gcgcccgtgg cgagcaggtt ggtggcgacc ccgaccgcgg cgatcagcgg ggcctgcaac
      841 gcgaccagca gcagaacgaa gccgagggcg aggacgacgc cgatcaccag cggcgtcttc
      901 gccgagagct cggcctgcag gtcgtgattc tcggcgatgg ctccgccgac cagcgcgccg
      961 gaggggagat ccgcccgcag acgttcaatc gtcgcgccga cctcggggct ggaggggtcc
     1021 tgcttcggga tcgcctggat cagcgccagc ccacccgaac gctcggcggg catgacctgt
     1081 gcgatgcccg ggtcgctctg ggcggtcgcc gcggtggtag ccgcggcgcc ggccggggcc
     1141 acgagctgga gcggcccggt cgccccgggg ccgaaggcgg cctgcacctg ctggtagccg
     1201 atccgggatg agtcacccga cggcaccacc ttgatggagg gcatcgcggt cttcagctgg
     1261 gtgaccggga tgacgagcag gaccagggct gcaaccgtcg gaatgccgta gcggtatgga
     1321 tgacgccaga gccgctcgcc ccaggccgcg aagcggggcg agcggtgctc gtcggagtga
     1381 gcccagggca gggagagctt gtcgactctg gggccgagct tggc
//
LOCUS       DATIFF010000451         1354 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2059270, whole genome shotgun sequence.
ACCESSION   DATIFF010000451 DATIFF010000000
VERSION     DATIFF010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1354
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2059270"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..225
                     /locus_tag="VLD58_06775"
     CDS             <1..225
                     /locus_tag="VLD58_06775"
                     /inference="COORDINATES: protein motif:HMM:NF016165.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin receptor-like dimerization
                     domain-containing protein"
                     /protein_id="HSB54040.1"
                     /translation="NRRLMAAERQWLLPEGIPGRPWFKHALYAPKFTYAAMELPGVRE
                     AVDAGDWSRAREELARVVGRVRAVSAALAR"
     gene            277..1143
                     /locus_tag="VLD58_06780"
     CDS             277..1143
                     /locus_tag="VLD58_06780"
                     /inference="COORDINATES: protein motif:HMM:NF018963.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase-like
                     domain-containing protein"
                     /protein_id="HSB54041.1"
                     /translation="MKLPVLLLPLLVVQAPAPARWNDADWTVLDAKVRWAAARRLDTL
                     PLGTAIARLGETFVGTTYTPGTLEAPGPEHLVINLRELDCVTFVENMLAMTRFIRQDG
                     VKALANRPAAEAKYARYLEEIRYRGGHLDGYPSRLHYFSEWLSDNAARGRIRLLAREL
                     GGVRDSEPIAFMSAHPAAYRQMAEPGIPDAIRAMEVRLNAGPPRWYIPEDRIASIADQ
                     IHDGDIIAATSTLPGLDVAHTGIALWKDGALHLLHAPLVGKAVEISSVPLAQRILDIK
                     TQDGIMVARVLR"
     gene            complement(1150..>1354)
                     /locus_tag="VLD58_06785"
     CDS             complement(1150..>1354)
                     /locus_tag="VLD58_06785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54042.1"
                     /translation="ASDALEAVAPDVLAQNATLMALTAYWIADRPERFATPWPADRIE
                     KRFIAAHQDGMLKAFGLWPFPPR"
BASE COUNT          202 a          484 c          463 g          205 t
ORIGIN      
        1 aatcgccgcc tgatggcggc cgagcggcag tggctcctgc cggaggggat tcccggccgg
       61 ccctggttca agcatgcgct ctatgccccg aagttcacct acgcggcgat ggagctgcca
      121 ggcgtccggg aggcggtgga cgccggggac tggagccgcg cgcgcgagga actggcgcgc
      181 gtggtgggac gggtgcgggc ggtctcagcg gcgctggccc gataacgctg cacgccccga
      241 ggtcgcctcg gacttcgagg cgactactat tggagcatga agctcccggt cctgctcctt
      301 cctcttctcg tggtccaggc ccccgcgccg gcccgctgga acgacgccga ctggacggtc
      361 ctggacgcga aggtccgctg ggccgccgcc cggcggctcg acaccctccc cctcggcacc
      421 gccatcgccc ggctggggga gacgttcgtg ggaaccacct acacccccgg cacgctcgag
      481 gccccgggcc ccgagcacct ggtcatcaac ctccgcgagc tcgactgcgt caccttcgtc
      541 gagaacatgc tggcgatgac ccggttcatc cggcaggatg gcgtgaaggc gctggccaac
      601 cgcccggccg cggaggccaa gtatgcacgg tatctggaag agatccgcta ccggggcggc
      661 cacctcgatg gctaccccag ccggctgcac tacttctcgg agtggctgag cgacaacgcg
      721 gcgcggggcc ggatccggct gctggcccgg gagctgggcg gggttcgcga ttcggagccg
      781 attgccttca tgtcggccca tcccgccgcc tatcggcaga tggcggagcc gggcatcccg
      841 gacgcgatca gggcgatgga ggtccggctc aatgccggac cgccccggtg gtacatcccg
      901 gaagatcgaa tcgcgtcaat cgccgatcag atccacgacg gcgacatcat cgccgccacg
      961 tcgacacttc ccgggctcga tgtcgcccat acgggcattg ccctctggaa ggacggcgcc
     1021 ttgcacctcc tccacgcacc gctcgtcggc aaggcggtgg agatctcctc ggttcccctc
     1081 gcccagcgca tcctggatat caagacccag gatggcatca tggtcgctcg cgtcctgcga
     1141 tagcgcccgc tacctcggcg ggaagggcca gagcccgaac gccttcagca tgccgtcctg
     1201 gtgcgcggcg atgaaccgct tctcgatgcg gtcggccggc cagggcgtcg cgaaccgttc
     1261 cggccgatcg gcgatccagt aggcggtcaa cgccatcagc gtggcgttct gggccaggac
     1321 gtcgggcgcc accgcctcga gggcgtccga ggcc
//
LOCUS       DATIFF010000452         3331 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_59728, whole genome shotgun sequence.
ACCESSION   DATIFF010000452 DATIFF010000000
VERSION     DATIFF010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3331
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59728"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            129..482
                     /gene="rplT"
                     /locus_tag="VLD58_06790"
     CDS             129..482
                     /gene="rplT"
                     /locus_tag="VLD58_06790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HSB54043.1"
                     /translation="MPRVKSNVAHHARKKKIMRAAKGARGARSKLYKPAKETVERAMQ
                     YAYRDRRKKKGEFRALWITRINAAARIHGFNYSGFMAALKKAGVEINRKVLADLAVKD
                     ADAFARIAEVARAAG"
     gene            589..1758
                     /gene="pheS"
                     /locus_tag="VLD58_06795"
     CDS             589..1758
                     /gene="pheS"
                     /locus_tag="VLD58_06795"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002639667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HSB54044.1"
                     /translation="MPDTTSLQVKLDALRADMARVPALDAAALDAEEIRILGRKQGAL
                     TEILKELPGLPPEEKRAIGAAANRLKQEWEAVIALRRSDLAAQESARAQARIDLTMPG
                     RPRWQGAVHPVTQVVEEIVSIFHGLGFARATGPEAETEWYNFGALNFPPDHPAMDMHD
                     TLYLDVADRRKETDRRHNRSSGVGSAERRAQDRRTRDEGRLLLRTHTSPVQIRVMLEQ
                     PPPIRVVIPGMVYRKDPFDASHAPAFAQIEGLAVDEGISFVDLKATLAHFARDFFGDS
                     TRVRFRPSYFPFTEPSAEMDVSCGVCGGKGCPACKGTGWMEILGAGMVHPRVIANCGL
                     DPERFTGFAFGMGPGRIAMARYGITDIRLLYEGDMRFLEQFVSGGQAAKRQGGQS"
     gene            1755..>3331
                     /gene="pheT"
                     /locus_tag="VLD58_06800"
     CDS             1755..>3331
                     /gene="pheT"
                     /locus_tag="VLD58_06800"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR00472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HSB54045.1"
                     /translation="MNISRRWLEGFLGRKLDAQDVANRLVMLGAGVDAIEPQHPGLDK
                     IVVGLVESVQPHPNADRLRLCLVNDGSATQLHVVCGAPNVTAGKKYPFARVGTTIPGG
                     ITLDRRKIRGEVSEGMLCSARELGLGQDHDGILELDTTAAPGTPLLDALPVDDDRLVL
                     DVTPNRPDLLGHKGVARELAFSLGVPFRLPAIPGAPATGLGTLRRIDAERGKVDGVTV
                     GTDDPEGCRRFTATVIRGVKIGPSPAWLRDRLAAAGVRSISNVVDATNYAMLELNHPM
                     HAYDLARVRGGQVVARRATQGEKVTTLDGVERTLTSDMVAIADGAGAVGVGGVMGAAN
                     TEVSETTTDLLLECAWFEPRRVRRTRKALNLSTDASQRFERGVDLWGLPEAQRRLADL
                     ILATAGGQVVDAVDVWPIITHPPRIFLRVGRVQQLLGAAVPVPVIEKYLVAIGCTVLY
                     KPDDERLAVDVPGWRPDLEMEIDLIEEIARLHGYDNFPIDLLPYRVNPRLSEAPLDRA
                     IIEVREGLVRLGLLETTS"
BASE COUNT          536 a         1181 c         1130 g          484 t
ORIGIN      
        1 cgaaccactc gcacatcctg accaagaaga cgcgcaagcg gaagaacaag ctcaagaagc
       61 cgtccctggt ttcttcggcc gacttcccgc gcgtcagccg cctgcttcag gcgtaaccgg
      121 agggtaccat gcctcgtgtc aagagcaacg tcgcccatca tgcccgcaag aagaagatca
      181 tgcgggccgc gaagggcgcc cgtggcgccc ggagcaagct gtacaagcca gccaaggaga
      241 cggtcgagcg ggccatgcag tacgcctacc gcgaccggcg caagaagaag ggcgagttcc
      301 gggccctctg gatcacccgc atcaacgccg cggcgcggat ccacgggttc aactacagcg
      361 gcttcatggc cgcgctcaag aaggccggtg tcgagatcaa ccggaaggtg ctggccgatc
      421 tcgcggtgaa ggacgccgac gcctttgcgc gcatcgccga ggtggcgcgg gccgccggct
      481 gacgtcccgc ggccggctgc acctcggggg tcagggacgg gctggcgccg gttcctgacc
      541 cctgcgactt ttggacgcgg gacaatcacc agtcacccga tcgccatcat gcccgacacc
      601 acgtcgctcc aggtcaagct cgatgcgctg cgggccgaca tggcccgtgt gccagcgctc
      661 gacgcggccg ccctcgatgc cgaggaaatc cgcatcctgg gccgcaagca gggggcgctg
      721 accgagatcc tcaaggaact ccccgggctc ccgcccgagg agaagcgcgc catcggcgcc
      781 gccgccaacc ggctcaagca ggagtgggaa gcggtcatcg ctctgcgccg gagcgacctc
      841 gccgcccagg aatccgcccg ggcccaggcc cggatcgacc tcaccatgcc gggccgtccc
      901 cgctggcagg gcgcggtgca tccggtcacc caggtggtcg aggagatcgt ctcgatcttc
      961 cacggactcg gcttcgcccg ggccaccggc cccgaggccg aaaccgagtg gtacaacttc
     1021 ggtgcgctca acttcccgcc ggaccacccg gcgatggaca tgcacgacac gctgtacctc
     1081 gacgtcgccg accggcgcaa ggagaccgac cgccggcaca accgctcgtc cggggtaggg
     1141 tcggcggagc ggcgggccca ggatcgccgc acccgcgacg aggggcgcct gctgctccgg
     1201 acccacacct cgccggtgca gatccgggtg atgctggagc agcccccgcc gatccgggtg
     1261 gtgattcccg gcatggtcta tcgcaaggat ccgttcgacg cctctcacgc tcccgccttc
     1321 gcccagatcg aagggctcgc ggtggacgag gggatttcgt tcgtcgacct caaggccacg
     1381 ctggcccatt tcgcccgcga cttcttcggg gacagcacca gggtgcgctt ccgtccaagc
     1441 tacttccctt tcaccgaacc atcggcggag atggacgtga gctgcggcgt gtgcggcggc
     1501 aagggctgcc cggcctgcaa aggcaccggt tggatggaga tcctcggcgc cggcatggtg
     1561 cacccgcgcg tgatcgcgaa ttgcgggctg gaccccgagc gcttcaccgg gttcgcgttt
     1621 ggcatgggac cgggacggat cgcgatggcc cgctatggga tcaccgatat ccgcctcctg
     1681 tatgagggcg atatgcggtt cctggagcag ttcgtttcag gcggccaggc ggcaaagcgg
     1741 caaggcgggc agtcgtgaat atctcgagga gatggctgga gggcttcctg ggacggaagc
     1801 tcgatgccca ggacgtcgcc aaccgcctgg tcatgctcgg cgccggagtc gatgccatcg
     1861 agccgcagca tccgggcctc gacaagatcg tcgtcggcct ggtcgaatcg gtccagccgc
     1921 accccaacgc ggaccggctg cgcctctgcc tggtgaacga cggctccgcc acccagctcc
     1981 acgtggtgtg tggcgcgccc aacgtgaccg ccgggaagaa gtaccccttc gcccgggtgg
     2041 gcaccacgat tcctggcggc atcaccctcg atcgccgcaa gatccgcggc gaggtctccg
     2101 aggggatgct ctgcagcgcc cgcgagcttg gcctgggcca ggaccacgac ggcatcctcg
     2161 agctcgacac caccgccgcg cccggcacgc cgctgctcga cgcgttgccg gtcgacgacg
     2221 atcggctggt gctcgacgtc acccccaatc gccccgacct gctgggccac aagggcgtcg
     2281 cgcgcgagct ggccttcagt ctcggcgtgc cgttccgtct cccggcgatt cccggcgcgc
     2341 ctgccaccgg gctcggtacc ctgcggcgga tcgacgccga gcggggcaag gtcgatggcg
     2401 tgacggtggg gaccgatgat cccgaaggct gccgccgctt cacggccacc gtgatccggg
     2461 gcgtgaagat cgggccctcg cccgcatggc tccgcgaccg actcgccgcc gccggtgtgc
     2521 ggagcatcag caacgtggtc gacgcgacca actacgcgat gctcgagctc aaccacccga
     2581 tgcacgccta cgatcttgcc agggtgcgcg ggggacaggt ggtggcgcgg cgcgcgaccc
     2641 agggtgagaa ggtcaccacc ctcgatgggg tcgagcggac cctgaccagc gacatggtgg
     2701 cgatcgcgga cggggccggc gccgtcggtg tcggcggcgt gatgggagcc gccaataccg
     2761 aggtgagcga gaccaccacc gatctcctgc tcgagtgcgc ctggttcgaa ccccgccggg
     2821 ttcggcgcac ccggaaggcg ctcaacctgt cgaccgatgc gagccagcgg ttcgagcggg
     2881 gcgtcgatct ctggggcctg cccgaagcgc agcgccgcct cgccgacctc atcctcgcga
     2941 cggcgggcgg ccaggtggtc gatgcggtcg acgtgtggcc catcatcacc catccacccc
     3001 ggatcttcct ccgggtgggc cgggtgcagc agttgctagg cgcggcggtg ccggtgccgg
     3061 tgatcgagaa gtacctcgtc gccatcgggt gcaccgtgct ctacaagccc gacgacgagc
     3121 ggctggccgt cgacgtgccc ggctggcgcc ccgacctcga gatggaaatc gacctgatcg
     3181 aggagattgc ccggctccac gggtacgaca acttcccgat cgatctcctg ccgtaccggg
     3241 tcaacccgcg gctctccgag gcccccctcg atcgggccat catcgaggtc cgcgaggggc
     3301 tggtccgcct cggcctgctc gagacgacct c
//
LOCUS       DATIFF010000453         1004 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_366586, whole genome shotgun sequence.
ACCESSION   DATIFF010000453 DATIFF010000000
VERSION     DATIFF010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366586"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..834)
                     /locus_tag="VLD58_06805"
     CDS             complement(<1..834)
                     /locus_tag="VLD58_06805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54046.1"
                     /translation="MIRSGFIRPACAAAAALAFAACQENSSPTAPNPGQPSLQVQSAQ
                     AGELPSAAQLDRQIPGFGGFFLDAGGIPTVYLTPGAGRAAAEQALSGYLNGRGLSTAT
                     LRTLQARYGWQQLERWFNAASPAALAISGTVFVDNDETSNRVLIGVSDISAQGQVRAA
                     VARLGVPDEAVIVQRADPILQVATLQNVVDRPVRAGVQINFPGYLCSVGFNATSGTQK
                     SFITASHCTNTQGGVESTPYWQPLQTTDPVQIGTEVADPVYQKGIAGCPRGKKCRQSD
                     AS"
BASE COUNT          153 a          331 c          356 g          164 t
ORIGIN      
        1 cgacgcgtcg ctctggcggc acttcttccc gcggggacag cccgcgatgc ccttctggta
       61 gaccggatcg gccacttcgg tcccgatctg gaccgggtcg gtcgtctgga gcggctgcca
      121 gtacggggtg ctctccacgc cgccctgcgt gttggtgcag tgcgaggcgg taatgaacga
      181 cttctgggtg cccgaggtgg cgttgaagcc caccgagcag aggtacccgg ggaagttgat
      241 ctggacgccg gctcgcactg gccggtccac cacgttctgg agcgtggcga cctgaaggat
      301 cgggtcggca cgctgcacga tgacggcctc atcggggacg ccgagccgcg cgaccgcggc
      361 gcggacctgg ccttgcgcgc tgatgtcgga gaccccgatc agaacccggt tgctggtctc
      421 atcattgtcc acgaacaccg tgccggagat cgccagcgcc gcgggacttg cggcattgaa
      481 ccaccgctcc agctgctgcc agccgtacct ggcttgcagc gtccgcagtg tggcggtcga
      541 gaggccgcgg ccattgaggt agcccgagag cgcctgctcg gcggctgccc ggccggcgcc
      601 cggggtcagg tagaccgtcg ggatgccgcc ggcgtcgagg aagaacccgc cgaaaccggg
      661 aatctgacga tcgagctgcg ccgccgatgg cagctcgcca gcttgcgccg attggacctg
      721 aagcgacggc tgccccgggt tgggcgcggt cggactggaa ttctcctggc acgccgcgaa
      781 ggccagggcg gccgccgccg cgcatgcggg acggatgaag ccggatcgga tcattcgggc
      841 acctccgggg ggaagcacat tctcgctgtg atggttcgct ccgaaccggg cccggtccgg
      901 gatcggcata tatatgcctc ttaatctcgc gccgccacag cgcaggttcg tgcaggcgga
      961 caaggggata gattgtgcca tccctccgac cggacctgcc atct
//
LOCUS       DATIFF010000454         2211 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_214131, whole genome shotgun sequence.
ACCESSION   DATIFF010000454 DATIFF010000000
VERSION     DATIFF010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2211
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_214131"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..403
                     /locus_tag="VLD58_06810"
     CDS             <1..403
                     /locus_tag="VLD58_06810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54047.1"
                     /translation="APEPIAEFGQVCRAVFRPAGIPDDSASAALVRRGLEEDRLRLSG
                     AVTRLRPGVTRDSVRTPLDKPYNRWVGPNIHQLTEGNGTLARQENFVEWTGKWYARDG
                     RPTGNRSEYRRLNAELERTEAQLGCLKAAWP"
     gene            394..1569
                     /locus_tag="VLD58_06815"
     CDS             394..1569
                     /locus_tag="VLD58_06815"
                     /inference="COORDINATES: protein motif:HMM:NF017569.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSB54048.1"
                     /translation="MALTGAGAPSGEALAANAILFGRLLRRAGLAIDPEQSRTFVQVL
                     ELLGVERKQDVKTAGRVIFVRRRDDLPTYDEAFELFWRRRGAAGSLGHRLPRMQQSER
                     RPGALDLSDALSPAEPAKAPLSVVLAGAASSAERLRQADFGELSGAEEREAQRLLAAL
                     RPRLPMRPARRGILGRQGSRPALRQMLRRSLASGGQPLWWRWLRRGTRPRPIVLVCDI
                     SGSMERYSRFLLRFAHTLARSGAPLEVFVFGTRLTRITRQLKVRSGDEALRRVAGSVV
                     DWSGGTRIGESLRELNQRWVRRTVKSGAIVLLISDGWERGDPELLAREMARLKRSCHR
                     LVWLDPLASREGFEPATLGLKAAMPYVDEFLPCASVASLERLGEMLVSEKGEGRSKK"
     gene            complement(1765..>2211)
                     /locus_tag="VLD58_06820"
     CDS             complement(1765..>2211)
                     /locus_tag="VLD58_06820"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HSB54049.1"
                     /translation="WASTVPEILEAEVRVGLLPGEELQWFKRLVTDRIMAAAARDPWL
                     KAHPPVITFFGGQFIAAETPANAPICEAIRQAHRAVTGKTPKTEAATYGADMRHFIAF
                     GGMPCVMYGAGDIKLAHGPDENLPIDELLTATKTVACLLAEWCGVA"
BASE COUNT          342 a          777 c          758 g          334 t
ORIGIN      
        1 ggccccggag ccgatcgcgg agttcggcca ggtctgccgg gcggtgttcc ggccggccgg
       61 gatcccggac gattctgcct cggccgctct ggtgcgccgg ggtctggaag aggaccgcct
      121 gcgtctctct ggcgcagtca cgcggctccg ccctggcgtc acccgtgact ccgtccgcac
      181 ccccctggac aagccctaca accgctgggt cggacccaac atccaccagc tgacggaggg
      241 gaacggcacc ctcgccaggc aggagaactt cgtcgagtgg acgggtaagt ggtacgctcg
      301 tgatggccgg ccaaccggca accgcagcga ataccgccgc ctcaatgccg agctcgagcg
      361 gaccgaggca caactcggtt gcctcaaggc cgcatggccc tgacgggagc gggcgcgccc
      421 tccggcgagg ccctcgccgc caatgccatt ctcttcggca ggctgctccg ccgggccggg
      481 ctggcgatcg atccggagca gagccgcacc ttcgtgcagg tgctcgaact cctcggcgtc
      541 gaacggaagc aggacgtgaa gaccgcgggc cgcgtcatct tcgtacgccg ccgcgacgat
      601 ctccccacct acgatgaagc cttcgaactg ttctggcggc gccggggcgc ggccgggtct
      661 ctcggacacc ggttgccccg gatgcagcag agtgagcgcc gcccaggggc cctcgacctg
      721 agcgacgcgc tgagcccggc cgagccggcc aaggcgccgc tcagcgtggt gctcgcggga
      781 gcggcgtcct ccgccgaacg gctgcggcag gcggacttcg gtgagctgag cggggcggag
      841 gagcgggaag cgcagcgtct gctcgcggcc ctgcgtcccc gcctcccgat gcgcccggcc
      901 cggcgcggta tcctgggccg gcagggcagc cgtccggcgc tccgccagat gctccgccgt
      961 tcgctcgcca gcgggggtca gccgctctgg tggcgctggc tccggcgcgg caccaggccc
     1021 cgtcctatcg tgctggtctg cgacatcagc ggctcgatgg aacgctacag ccggttcctg
     1081 ctccggttcg cccacacgct ggcccgctcc ggcgcaccgc tcgaggtctt cgtcttcggc
     1141 acccggctca ccaggatcac ccgccagctc aaggtccgta gcggcgatga ggctttgcgc
     1201 cgggtggcgg gatcggtggt cgactggagc ggaggaaccc ggatcgggga gagtctccgg
     1261 gaactcaatc agcgctgggt gcgccgcaca gtgaagagcg gcgcgatcgt gctgctgatt
     1321 tccgacggat gggagcgggg cgacccggaa ctgctggccc gggaaatggc gcggctcaag
     1381 cgctcctgcc accggctggt ctggctcgac ccactcgcga gccgcgaagg gttcgagccg
     1441 gccaccctgg gcctcaaagc ggcgatgccg tatgtggatg agttcctgcc ctgtgccagc
     1501 gtggcgtcgc tggagcggct gggggagatg ctcgtgagtg agaagggaga agggagaagt
     1561 aagaagtaag aagtaagaag tgaggagtga ggacggtgtt acgcgaagcg acgatggagc
     1621 gggggccccc gaggagcgtg cgccgctaag cggtctatcc gatcccttgc ggccacgctc
     1681 cgagaagccc acgctccatc gtcccttctc tcgcctcaag tctcaagcct caagcctcaa
     1741 gccccaagcc ccaagcccca agcctcaagc caccccgcac cactccgcca gcagacacgc
     1801 caccgtcttg gtcgccgtga gcagctcatc gatgggcaga ttctcgtcgg gaccgtgcgc
     1861 cagcttgatg tcccccgccc cgtacatcac gcagggcatc ccgccaaagg cgatgaagtg
     1921 gcgcatgtcg gcgccatagg ttgccgcctc ggtcttcggc gtcttgcccg tcaccgcccg
     1981 atgcgcttgc cggattgcct cgcagatcgg cgcattggcc ggagtctcgg ccgcgatgaa
     2041 ctgtcccccg aagaacgtga tcaccggcgg atgcgccttg agccaggggt cgcgcgcggc
     2101 ggcggccatg atgcgatcgg tcaccaggcg cttgaaccac tgcagttctt ctcccggcaa
     2161 tagtcccacc cgcacctcgg cctcgagtat ctccggcacg gtcgaggccc a
//
LOCUS       DATIFF010000455         1351 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_214332, whole genome shotgun sequence.
ACCESSION   DATIFF010000455 DATIFF010000000
VERSION     DATIFF010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1351)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1351)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1351
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_214332"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..191)
                     /locus_tag="VLD58_06825"
     CDS             complement(<1..191)
                     /locus_tag="VLD58_06825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54050.1"
                     /translation="MNLGGPAHQASYLSGRRFHPDRYETLLVHGRPAPGEESMADLAE
                     SEGAETIYLPSLRQPVNPL"
     gene            complement(224..1270)
                     /locus_tag="VLD58_06830"
     CDS             complement(224..1270)
                     /locus_tag="VLD58_06830"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MraY family glycosyltransferase"
                     /protein_id="HSB54051.1"
                     /translation="MGTLLTALAVTMLATPLARRLAVRTAFFDHPVGYKEHSQPTPYL
                     GGAAVMAGVMAGTVIGGAAEDYKRLLVAALVLFAIGTLDDRLRLGVTLRLIAQVATAV
                     ALWAVDLGWTMLPSHSANLVLTVVWVVGITNAFNLMDNQDGATGTIGAVCGVGIGTLA
                     LIQGAVPLGVIAFSLSGACLGFLHFNLAKPARIFLGDGGSMPIGLLVACTIMAIPDGR
                     LDWTLLFAAAPLAGLPILDTTLVVISRHRRGAPILSGDRAHLTHRLLATLGSERKVAL
                     VLAAAQAALCGLSIALFQLSQATVVAAAAAYLAVGAAVIMALETVALSPAPEPAFAPG
                     PEPVLAPRHEENPS"
BASE COUNT          230 a          469 c          470 g          182 t
ORIGIN      
        1 tgcagcggat tgacgggctg gcggaggctg ggcagataga tcgtctccgc tccctcggac
       61 tcggccaggt cggccatcga ctcctctccc ggcgcgggcc gtccgtgaac cagcagggtc
      121 tcgtagcgat ccgggtggaa gcggcggcca ctcaggtagc tcgcctgatg agcgggcccc
      181 ccgaggttca tgcgggcgat cacccgcagg acccggacct tgctcagctc gggttctcct
      241 cgtgccgggg cgcgagcacc ggctcaggcc ctggcgcgaa cgccggctca ggcgctggcg
      301 agagggccac cgtctccagc gccatgatca ccgccgcgcc gaccgccaga taagcggccg
      361 cggccgcgac caccgtcgcc tggctgagct ggaagagcgc gatcgagagc ccgcataggg
      421 ccgcttgtgc ggctgcaagg acgagggcca ccttacgctc ggagcccaag gtcgcgagca
      481 accggtgcgt gaggtgggcc cggtccccgc tgaggatcgg cgccccgcgt ctgtgcctgg
      541 agatgaccac cagagtcgta tccaggatcg gcagcccggc cagcggagcg gctgcgaaca
      601 gcaacgtcca gtccaggcgg ccgtcgggga tcgccatgat cgtgcaggcg acgagcaggc
      661 cgatcggcat gctgccgcca tcgccgagga agatccgcgc cggcttggcg aggttgaagt
      721 gcaggaagcc caggcaggcg ccggagaggg agaaggcgat cacgccgagt ggcactgccc
      781 cttgaatcag agccagcgtt ccgatgccca ctccgcagac ggcgccgatc gtgccggtcg
      841 ctccgtcctg gttgtccatc aggttgaagg cattggtgat gccgaccacc cagacgacag
      901 tgagcacgag attggcggaa tggctgggca gcatcgtcca gccgaggtcc acggcccaga
      961 gtgccaccgc ggtcgccacc tgagcgatca ggcgcagggt gacgcccagg cgaaggcggt
     1021 cgtcgagggt accgatcgcg aacagcacca acgcggcgac gagcagccgc ttgtagtcct
     1081 cagccgcgcc gccgatcacc gtcccggcca tgactccagc catcaccgcg gccccgccca
     1141 gatacggcgt cggctgcgaa tgctccttgt atccgaccgg atggtcgaag aaggcggtcc
     1201 gcaccgcgag ccgccgggcg agcggtgtcg ccagcatggt gacggccaac gcggtcagca
     1261 gagtccccac gatccgaatc tcctccccgg cgtccatccc gcctaggaga gctcggcagc
     1321 ccgctcgaag ccgcccgtaa ggattgtccg c
//
LOCUS       DATIFF010000456         1071 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2213256, whole genome shotgun sequence.
ACCESSION   DATIFF010000456 DATIFF010000000
VERSION     DATIFF010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2213256"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1071)
                     /locus_tag="VLD58_06835"
     CDS             complement(<1..>1071)
                     /locus_tag="VLD58_06835"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB54052.1"
                     /translation="ETHFASLGYSLLYSWTPERRQLDYLRYIGASDISAKELKLFGLS
                     DFLVGRYDRLSTEFYEANKSLAIRRSLVSSLLAAVGTLGYYAAYAVIIYLTVIGHRSA
                     AGLFTIGVLTFLAGSFRQSRDVIQRILLSLSQVYEQALYLDDLFTFLALEPRIVRRSE
                     ARPIPVPIRTGFAFENVGFRYPGSETWAVRGLDFTLAPGERIALVGENGAGKTTLVKL
                     LARLYDPSEGRILLDGVDLREYDVESLRRNVGVIFQDFVRYDFLLRENIAVGNIERVE
                     DAPAIEGAAQRSLADTVAARLVGGYGQMLGRRFEGGVDLSGGEWQKVALARAYMRDAQ
                     LLILDEPTAALDARAEYEVFLRF"
BASE COUNT          178 a          373 c          372 g          148 t
ORIGIN      
        1 gaaccggagg aacacctcgt attcggcccg ggcgtccagc gccgcggtcg gctcgtccag
       61 gatcagcagc tgggcgtccc gcatgtaggc ccgcgccagg gccaccttct gccattcccc
      121 gcccgacaga tccaccccgc cctcgaagcg gcgccccagc atctggccgt acccgccgac
      181 cagccgagcc gccacggtgt cggccaggct gcgctgggcc gccccctcga tcgccggcgc
      241 gtcctccacc cgctcgatgt tgccgacggc gatgttctcc cggagcagga agtcgtagcg
      301 gacgaaatcc tggaagatga ccccgacgtt ccgccgcaga ctctcgacgt cgtactcccg
      361 gaggtccacg ccgtcgagca ggatccgccc ctcgctcggg tcatagagcc gggccagcag
      421 cttgaccagc gtggtcttgc cggccccgtt ctcccccacc agggcgatcc gctcgcccgg
      481 cgccagggtg aagtccagtc cccgcaccgc ccaggtctcc gacccggggt agcggaagcc
      541 cacgttctcg aaggcgaagc cggtccggat cggcaccggg atggggcggg cctcgctccg
      601 ccggacgatc cggggctcca gcgccaggaa ggtgaacagg tcgtcgagat agagcgcctg
      661 ctcgtagacc tggctcagcg acaggaggat ccgctggatc acgtcgcggc tctggcggaa
      721 cgagccggcc aggaaggtga ggacgccgat ggtgaacaga ccggccgccg agcggtggcc
      781 gatcacggtc aggtagatga tgaccgcgta tgccgcgtag tagcccagcg tccccaccgc
      841 cgcgagcagg ctggagacca ggctccggcg gatcgccagg gacttgttgg cctcgtagaa
      901 ctcggtggag agccggtcgt accggccgac caggaagtcg gagaggccga acagcttgag
      961 ctccttggcc gagatgtcgc tggcgccgat gtaacggagg tagtcgagct ggcggcgctc
     1021 gggggtccag gagtacagca gggagtagcc cagcgaggcg aagtgggtct c
//
LOCUS       DATIFF010000457         1075 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2060505, whole genome shotgun sequence.
ACCESSION   DATIFF010000457 DATIFF010000000
VERSION     DATIFF010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1075
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2060505"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..350)
                     /locus_tag="VLD58_06840"
     CDS             complement(<1..350)
                     /locus_tag="VLD58_06840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54053.1"
                     /translation="MRRTPPALLVLLLAAAVLPPSATAQKPDKPKGKPKTVEPAPAGP
                     TITLTFTTEERRILTDYYRQHPAGVKPLPPGIAKNLARGKPLPPGIAKQQLPQAVLTL
                     LPPRPGYERTIVGDL"
     gene            complement(381..>1075)
                     /locus_tag="VLD58_06845"
     CDS             complement(381..>1075)
                     /locus_tag="VLD58_06845"
                     /inference="COORDINATES: protein motif:HMM:NF019352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HSB54054.1"
                     /translation="GSTIVLHQGEPTLIWVINRSVEPTAIHWHGMELESPYDGVVGVG
                     GYDGSPTPTIMPGDSFEVRMTPPRAGTFMYHTHVNDIHQLRGGLWAPMLVLPPGATQD
                     PAHDLAFIFGEGPRNLVLPLRLQHLGAIPLVAGGRYRVRLMNVSAGTPNLVYTLSGES
                     GTVLWTPVARDGFDLPAWQRTPRQAEEAITIGETMDFEFVAPPAGPFGLEFRTGAGVV
                     LVRQPFTIGKGP"
BASE COUNT          156 a          344 c          402 g          173 t
ORIGIN      
        1 aggtcgccca cgatggtgcg ctcatagccc ggacgcggcg gcaggagcgt gagcaccgcc
       61 tgggggagct gctgcttcgc gatgcccggg ggcagcggct tgccccgagc caggttcttc
      121 gcgatgcccg gcggcagcgg cttcacgccg gccggatgct gccggtagta gtcggtgagg
      181 atccggcgtt cctcggtggt gaaggtcagg gtgatcgtcg ggccggccgg ggccggctcg
      241 accgtttttg gcttgccctt gggcttgtcg ggcttctggg ccgtggccga tggcggcaga
      301 accgccgccg ccagaaggag gaccagaaga gcgggcgggg tgcggcgcat gggacgctcc
      361 ggtcggggcc aggctggaat ctagggccct ttgccgatcg tgaacggctg ccgcaccagc
      421 accacgccgg ctccggtccg gaactcgagt ccgaaagggc ccgccggggg cgccacgaac
      481 tcgaagtcca tcgtctcgcc gatggtgatc gcctcctcgg cctggcgcgg ggtccgctgc
      541 caggcgggca gatcgaagcc atcgcgcgcc accggcgtcc agagcacggt gcccgactcg
      601 ccgctcagtg tgtacaccag gttgggcgtg ccggccgaaa cgttcatgag gcgaacccgg
      661 taccggccgc cggccaccag ggggatggcg cccaggtgct gcagccggag cggcaggacc
      721 aggttgcggg gtccctcccc gaatatgaag gcgaggtcgt gggccggatc ctgggttgct
      781 cctggaggga gcaccagcat gggagcccag agtccgcccc ggagttgatg gatgtcgttg
      841 acgtgggtgt ggtacatgaa ggtgccggcg cggggtggcg tcatccggac ctcgaatgaa
      901 tcacccggca tgatcgtggg tgtggggctt ccgtcatatc cgcctacgcc cacgaccccg
      961 tcgtagggac tctccagctc catcccgtgc cagtggatcg cggtcggctc cacggagcga
     1021 ttgatcaccc agatcagagt tggctctccc tggtgcagca cgatcgtcga gcccg
//
LOCUS       DATIFF010000458         1082 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_983668, whole genome shotgun sequence.
ACCESSION   DATIFF010000458 DATIFF010000000
VERSION     DATIFF010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_983668"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            121..>1082
                     /locus_tag="VLD58_06850"
     CDS             121..>1082
                     /locus_tag="VLD58_06850"
                     /inference="COORDINATES: protein motif:HMM:NF012913.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HSB54055.1"
                     /translation="MIHLLFTGGTISMTRDERAGGNLPTHGGEALVAHAPELQRLAPL
                     HIEDWGRYPACHMGPDKLWELRNRVAAISRQERPTGIVITHGTDTIEETAYLLARTLD
                     SEIPVAITGAMRTSSDPGWDGPDNLTAAARVAADPASRGRGTMVVFAGKIFAGHQAAK
                     IEATALEAFGAPHAGPIGEVRHGRVDYTLGPQSCVAPHSSALPHGLTARVALIPMIIG
                     DQGELLDLARPIHDGVVLMAFGAGNLPPGALPAVRRWLAEGKPVVLSTRCPRGQVTPI
                     YAFPGGGATLVREGVIPAGPRTPSQARMELVISLSAGVGYGEGW"
BASE COUNT          167 a          370 c          392 g          153 t
ORIGIN      
        1 ggttcccctt cccgagtcgc gacccccgag gtcggtctga gcgatgaggt ccggctggct
       61 gctcggacac cgtgagaact gggaaccggg aactgggaac tcggaaccgg acgctctgcg
      121 atgattcatc tgctgttcac cggcggcacc atctccatga cccgcgacga gcgggccggg
      181 gggaacctgc cgacgcatgg cggagaggcg ctggtggccc atgcgcccga gcttcagcgc
      241 ctggcgccgc tgcacatcga ggattggggg cgttacccgg cctgtcatat ggggccggac
      301 aagctgtggg agctgaggaa ccgggtggcg gcgatctcgc ggcaggagcg gccgaccggc
      361 atcgtgatca cccacgggac cgacacgatc gaggaaaccg cctacctgct cgcacgcacg
      421 ctcgactccg agatcccggt cgccatcacc ggcgcgatgc gcacctcgag cgatccggga
      481 tgggatggac ccgacaatct gaccgccgcc gcccgagtgg cggccgaccc cgcgagccgg
      541 ggccggggaa cgatggtcgt cttcgcgggg aagatcttcg cgggccacca ggcggccaag
      601 atcgaggcga ccgccctgga ggccttcggg gctccgcacg ccggaccgat cggggaagtg
      661 cggcacgggc gggtggacta taccctgggg ccgcagagct gcgtggcacc gcacagctcc
      721 gccctgccac acggcctcac cgccagggtc gccctgattc ccatgatcat cggggaccag
      781 ggcgagctgc tcgacctggc tcgcccgatc catgacggcg tcgtgctcat ggcattcggc
      841 gcgggcaatc tgccgcccgg cgctctgccc gccgtccggc gctggctcgc tgaaggcaag
      901 cccgtcgtac tctccacgcg gtgtccgcga ggccaggtga cgccgatcta cgccttcccc
      961 ggcggcggcg ccacgctggt ccgtgagggc gtcattcccg cggggccacg cacgccaagc
     1021 caggcacgga tggagctggt gatcagtctg tcggcgggag tgggctatgg ggagggatgg
     1081 ag
//
LOCUS       DATIFF010000459         4314 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_60769, whole genome shotgun sequence.
ACCESSION   DATIFF010000459 DATIFF010000000
VERSION     DATIFF010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4314
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60769"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1241)
                     /locus_tag="VLD58_06855"
     CDS             complement(<1..1241)
                     /locus_tag="VLD58_06855"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB54056.1"
                     /translation="MTDLPSELLAGLASRYVVERELGKGGMSVVYLARDLRHDRPVAL
                     KVLQGRLLTSREHAERFLREIRFAAQLTHPHILPLYDSGEIPAPEGGPVLYYVMPYVA
                     GGSLRDRLRTEGQMPVDQAIRLVCAVGAALDYAHRRHIAHRDVKPENILLQEGEPVVA
                     DFGVARGLGDDYDVGPGVTEPGVAVGTPAYMSPEQASGDPVVDARSDQYALACVLYEI
                     LTGNPPFVGTGARATMARQATEKPRSPRAERPEIPAAVERAMLRALAKEPVERFASVA
                     DFCGALVTPLSGLPEPGSSDQRCIAVLPFANASPDPDNEYVSDGITEELINALAQVRG
                     LRVSSKTSVFALKGRQDDVRTIGAILDVPTVLEGSVRRVGDRFRVTAQLTDTATGQLL
                     WSERFDREHRDILALEEDLART"
     gene            complement(1299..2387)
                     /locus_tag="VLD58_06860"
     CDS             complement(1299..2387)
                     /locus_tag="VLD58_06860"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HSB54057.1"
                     /translation="MVLLLAAASSASAQGINGVVTEAESHHSVNAALVQLLPAESDSI
                     LASTVTTEQGRFRFIGIPVPRYRVRILRIGFRPWTSEPLLREAGRASEVAFAIPAVPV
                     VLSDITVEAKSSCRSSPADDERLARVWDDARTALALLRTSTGSQKLEFQGQTTRRMVD
                     PRGHLVSENKDLLSSLGAWPISSQPAESLAQLGFVQAKDTVFGPVYYGPDVNVFFSDA
                     FIRTHCFKLVQEKDSTLLGLRFEPAKGRDIPDIEGVLWVSRERNRLRRLEYRYTALWN
                     WVPKGQAGGQLDFTFLPDDRPALTGWSIRAPVARVEDWPEGARVRDATTIPYFGHGKV
                     VLHGFREEAGVVREIRIPGGAILWSGPA"
     gene            complement(2404..3210)
                     /locus_tag="VLD58_06865"
     CDS             complement(2404..3210)
                     /locus_tag="VLD58_06865"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSB54058.1"
                     /translation="MLIALAVGLALYALLVGWLVINEDRLVYFPEQGPVPLPRGIGVN
                     PVSLDAADGVRLSAWVLAPMSDASRWILVLHGNAGNLATPGRPEHDSQLWHLGLGVFA
                     LDYRGYGDSQGMPSESGLYADALAAWQYLTTVRQVPPGRIVIYGHSLGAAVAVQLATR
                     VPAAALIIEGAFTSAPDRGAELYPFIPVRLIARNRFPSLDRIRNLKMPLLVIHGRDDT
                     TIPIAHGRRLFDAAPEPKSFLEVAGGHDDAYVVGASEYEEGITRFLATLH"
     gene            complement(3238..>4314)
                     /locus_tag="VLD58_06870"
     CDS             complement(3238..>4314)
                     /locus_tag="VLD58_06870"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HSB54059.1"
                     /translation="KGLKAATDILTGRLKRRRITKFEFQRQAALLSGGNDSAGFQRAD
                     LIIEAVFEDLDVKRKVLADTEAVTKADAIFATNTSTIPITDIAAQASRPGQVLGMHFF
                     SPVDRMPLLEVIPTERTSPDTIATAVQFGRKLGKTVIVVRDRPGFWVNRILTPYMNEA
                     GYILGEGVPMEVIDSVMTRFGFPVGPITLLDEVGLDVGAKAAKVMHAAFGERLAPSSV
                     IQKMLDDKRLGRKNGRGFYLYRDGEKHGPDETVYDRLGIRPSAPSSTELVEKRLVYSM
                     LNEAAMAAGEGVVRSPRDGDIGAIFGIGYPPFRGGPLRYLDDLGAANVVQVLRELEAK
                     FGNRFTPAASLVAMAERGERFYQS"
BASE COUNT          701 a         1455 c         1494 g          664 t
ORIGIN      
        1 gtgcgggcca ggtcctcttc cagcgccagg atgtcgcggt gctcccggtc gaaccgttcg
       61 gaccagagga gctggcccgt tgccgtgtcg gtgagctggg ccgtcacccg gaatcggtcg
      121 cccacccgcc ggacacttcc ctccagcacc gtcgggacgt cgaggatcgc gccgatggta
      181 cgcacgtcgt cctgccggcc cttgagcgcg aagaccgagg ttttcgatga aacccggagc
      241 ccgcgcacct gggccagggc gttgatcagc tcctcggtga tcccgtcgct cacgtactcg
      301 ttgtcgggat cggggctggc attggcgaac gggagcaccg cgatgcagcg ctgatcgctc
      361 gacccgggct cgggcagacc cgacagcggc gtcaccagcg ccccgcagaa atcagcgacg
      421 ctggcgaatc gctccaccgg ctccttcgcg agcgcccgga gcatcgcgcg ctccaccgcc
      481 gcggggatct cgggccgttc cgcccggggc gaacggggct tctcggtcgc ctgacgggcc
      541 atcgtggccc gggctccggt tccgacaaag ggaggattgc cggtgaggat ttcgtagagt
      601 acacaggcga gcgcgtactg atcgctccgg gcatcgacca ccgggtcccc gctcgcctgt
      661 tccgggctca tgtacgccgg ggtgcccacc gcgacgcccg gctcggtcac gcccggaccc
      721 acgtcgtagt cgtcgcccaa tccccgagcc acgccaaaat cggcgaccac cggctcccct
      781 tcctggagca ggatgttctc cggcttcaca tcgcggtgcg cgatgtgccg gcgatgggcg
      841 tagtcgagcg ccgcgccgac cgcgcaaacc agccggatgg cctgatcgac cggcatctgg
      901 ccctcggtcc ggagccggtc acggagcgaa ccgccggcca cgtacggcat gacgtagtag
      961 agcaccggac cgccctcggg cgccgggatc tctcccgagt catacagtgg caggatgtgc
     1021 ggatgggtga gctgcgccgc gaagcggatc tcgcgcagaa agcgctcggc gtgttcccgg
     1081 ctggtgagga gccggccctg gagcaccttc agcgccacgg gacggtcgtg ccggagatcg
     1141 cgggcgaggt agaccaccga catgccgccc ttccccagct cccgctcgac gacatagcgg
     1201 ctggcgaggc ccgcgaggag ctcggagggc aggtcggtca tgggccgggt gcggtcaggg
     1261 ccgttggtca ccttgggaag gtatctgcct gccctccgtc atgccgggcc actccagagg
     1321 atggcgccac ccggaatccg gatctccctg acgacgccgg cctcctcccg gaagccatgc
     1381 aggaccacct tgccgtggcc aaaataggga atggtggtcg cgtcgcgcac ccgggcgcct
     1441 tcgggccaat cctcgacccg cgcgaccggg gcccggatac tccacccggt gagcgcgggg
     1501 cgatcgtccg gcaggaaggt gaagtccagc tggccgccgg cctgtccctt cggcacccag
     1561 ttccacagcg ccgtatagcg gtactcgagg cgcctgagcc ggttccgctc ccggctgacc
     1621 cagaggaccc cctcgatgtc aggaatgtct ctgcctttcg ccggttcgaa ccggaggcca
     1681 aggagggtgc tgtccttctc ctgcaccagc ttgaagcagt gggtgcggat gaatgcgtcg
     1741 ctgaagaaga cattgacgtc cggcccgtag tacaccggcc cgaagacggt gtccttcgcc
     1801 tgcacgaacc ccagctgggc caggctctcc gccggctgcg acgagatggg ccaggcaccg
     1861 agtgagctga ggaggtcctt gttctcggaa accaggtgcc ctcgcggatc caccatccgc
     1921 ctggtcgtct ggccctggaa ctcgagcttc tgcgagccgg tgctggtgcg gagcagcgcc
     1981 agggccgtac gggcgtcatc ccagacccgc gccagccgct cgtcgtccgc gggggaactg
     2041 cggcagctgc tcttggcttc gacggtgatg tcactcagca ccacgggaac ggcgggaatg
     2101 gcgaaggcca cctcgctggc ccgtccggct tcgcgcaaca gcggctccga ggtccagggg
     2161 cggaacccga tccggaggat acgcacacga tagcgtggca ccggaatgcc gatgaaccgg
     2221 aagcgcccct gctcggtggt gacggtgctg gcaaggatgg aatcggattc agcggggagg
     2281 agctggacca gggccgcgtt gacgctgtgg tgactctcgg cctcggtgac gacgccgttg
     2341 atcccctggg cactggcgga ggacgccgcg gccagcagca ggaccacgat tggcaggagc
     2401 ccgctagtgc agcgtcgcca gaaagcgggt gatcccctcc tcgtactcgc tggcaccgac
     2461 cacatatgcg tcatcgtggc ctccggcgac ttcgaggaac gacttgggct cgggtgcggc
     2521 atcgaacagt cggcggccat gcgcgatggg aatagtggtg tcatcccggc catgaatcac
     2581 caggaggggc atcttgaggt tacggatccg gtcgagcgag gggaagcggt tccgggcgat
     2641 cagcctgacg gggatgaagg ggtaaagttc cgcgccgcgg tcgggggccg aggtgaaggc
     2701 gccctcgatg atgagcgcgg ccgcggggac ccgggtggcg agttgcaccg ccaccgcggc
     2761 gccgagcgag tgaccataga tgacgatcct cccggggggt acctgccgga ctgtggtcag
     2821 gtactgccag gccgccagcg catccgcata gagaccggac tcggacggca tgccctgact
     2881 atcaccgtag ccgcggtagt ccagagcgaa cactcccagc ccgagatgcc agagctggct
     2941 gtcatgctcc gggcgtcccg gcgtggcgag gttcccggca ttgccgtgga gcaccagaat
     3001 ccagcgcgag gcgtcgctca tcggcgcgag cacccaggcg ctgaggcgga caccgtcggc
     3061 tgcgtcgagg gagacgggat tgacgccgat gccgcgcggg agcggcaccg ggccctgctc
     3121 gggaaagtag accaagcggt cttcgttgat caccagccag ccgaccagca gcgcgtagag
     3181 tgccagcccg accgccaagg cgatcaacac cccccgcccc gccgccgaca ccgcgcgtca
     3241 ggactggtag aagcgctcgc cccgttccgc catggcgaca agggaagccg ccggggtgaa
     3301 gcggttgccg aacttggcct cgagttcgcg tagtacctgc accacgtttg cggcgccgag
     3361 atcgtcgagg tagcggagcg gaccgccgcg gaatggtgga tacccgatgc cgaagatggc
     3421 gccgatatcg ccgtcgcgag gagaacgcac cacaccctca ccggcagcca tcgcagcctc
     3481 gttgagcatg ctgtagacca ggcgcttctc caccagctcg gtggacgaag gcgcggacgg
     3541 ccggatcccg agacgatcgt acaccgtctc gtcggggccg tgcttctcgc cgtcgcgata
     3601 gagatagaac ccgcgcccgt tcttccggcc cagccgcttg tcgtccagca tcttctggat
     3661 gacgctcgag ggagccagcc gttccccgaa cgcggcgtgc atcaccttgg cagccttggc
     3721 gccgacgtcg agccccacct catcgagcag cgtgatcggg cccaccggga acccgaagcg
     3781 ggtcatcacg ctgtcgataa cctccatcgg cacgccctcg ccgaggatgt agcccgcctc
     3841 gttcatgtag ggcgtgagga tccggttgac ccagaagccg ggacggtcgc gcaccacgat
     3901 caccgtcttg ccgagcttgc ggccgaactg caccgcggtg gcgatggtgt cgggcgaggt
     3961 ccgctcggtg ggaatcacct cgagcagcgg catccggtcg accggcgaga agaagtgcat
     4021 ccccagcacc tggccggggc ggctcgcctg ggccgcgatg tcggtgatcg ggatggtgct
     4081 ggtattggtg gcgaagatcg cgtcggcctt ggtcaccgcc tcggtgtcgg ccagaacctt
     4141 ccgcttcacg tcgaggtcct cgaacaccgc ttcgatgatg agatcggcgc gctggaaacc
     4201 ggcgctgtcg ttcccgcccg agagcagcgc ggcctggcgc tggaactcga acttcgtgat
     4261 ccggcgccgc ttgaggcggc cggtcaggat gtcggtggcg gccttgaggc cttt
//
LOCUS       DATIFF010000460         1088 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1444896, whole genome shotgun sequence.
ACCESSION   DATIFF010000460 DATIFF010000000
VERSION     DATIFF010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1444896"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..>1088)
                     /locus_tag="VLD58_06875"
     CDS             complement(104..>1088)
                     /locus_tag="VLD58_06875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54060.1"
                     /translation="PAGVRIGWQWAARPTEHLERVGFLDLPDTISREASYLVRIVGTT
                     GAGAEREIAGPVRWASSDTAVFAVDSTGKLRPRRAGRAILSVSVGGWRGAARRLTIVD
                     SRRSSVLREQWGAGIARNFIPFGDPMPDIAAGPGGIRGLWNRGDGAYLSGAYSRGHWD
                     ASRGLGVEVMLSVRLTRGQFQVGTVGLLGGLDSLSLGGWDHRKMGLPVGSASYALRSC
                     QLGYPAGEGPLGRERLSAYAGSGGRRLVVDASLGDGHWFRLRLQIFQDGRCGAALDGH
                     PIWVSQKRLLTDRPFAVQLGYSSYETKVLHGPLEVWQGVRDDVQWELLDRR"
BASE COUNT          187 a          388 c          363 g          150 t
ORIGIN      
        1 gatggtgatg atggttccgc gcttcatggc tggaatcggg cggaggtgag ggggcctcag
       61 ggtctccggt gacgttagcg cacgcggccg gattcggcca gtgctagcgg cgatcgagaa
      121 gctcccattg gacgtcatca cgcacaccct gccagacctc gagagggccg tgcagcacct
      181 tggtctcgta agaggaatac ccgagctgaa cggcgaacgg acgatcggtg agcaggcgct
      241 tctgggagac ccagatcgga tggccgtcga gggctgcgcc acagcgcccg tcctggaaga
      301 tctgcagcct gagacggaac cagtgtccgt cgccgaggct cgcatccacg accagcctcc
      361 tgcctcccga accggcatag gcggagagtc gctcgcgacc cagcggccct tcgcccgcgg
      421 gatatccgag ctggcaggaa cggagcgcgt agctggccga cccgaccggc agccccatct
      481 tccggtgatc ccagccccca aggctcaggg aatcgagccc gccgagcagc ccgacggtgc
      541 cgacctgaaa ctgcccgcgg gtgagccgga ccgacagcat gacttccacg cccaggccac
      601 ggctcgcatc ccagtgccct cgcgagtagg cgccactgag gtaggcacca tctccacgat
      661 tccacagccc gcggatcccg ccaggcccgg ccgcgatgtc cggcatgggg tcgccgaagg
      721 gaatgaagtt cctggcaatg ccggcccccc attgctccct cagcacgctg ctccgccggc
      781 tgtcgacgat ggtcagccgc cgggccgcgc cacgccagcc gccgacagat acgctcagga
      841 ttgcgcggcc ggcccggcgg gggcggagct ttccggtgct gtccaccgcg aagacggcgg
      901 tatccgagga agcccagcgc accgggccgg cgatctcccg ctccgcgccg gcgcccgtgg
      961 ttcccacgat tcgcaccagg tatgaggcct cacggctgat cgtatcgggg agatccagga
     1021 aaccgacacg ctcgaggtgc tccgttggac gcgcggccca ctgccagccg atccggacgc
     1081 ccgccgga
//
LOCUS       DATIFF010000461         1788 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_984006, whole genome shotgun sequence.
ACCESSION   DATIFF010000461 DATIFF010000000
VERSION     DATIFF010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_984006"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..206)
                     /locus_tag="VLD58_06880"
     CDS             complement(<1..206)
                     /locus_tag="VLD58_06880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54061.1"
                     /translation="MSNLPPHRRRGDLTAATAAGYQTEIPPSTLAQSAVCLLIDDDAD
                     VRQAMAHVLEAMGLSCIQASSGAEA"
     gene            complement(274..1338)
                     /locus_tag="VLD58_06885"
     CDS             complement(274..1338)
                     /locus_tag="VLD58_06885"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HSB54062.1"
                     /translation="MGTELAPERAESKPIAPRCMVVDDDAAVRKSIGKVTEAMGLSPL
                     LAENGREALDLLAAQGEVPLIISDVNMPGLSGLGLLEEVQRRYPDTAVLMLSGVADVK
                     TAVACLDKGALDYIAKPAMLDEVRARLAKALEKRDLLLQRRFYQRNLEHRVRLQAGRI
                     KELFLQGVQTLAHALEAKDAYTRGHSMRVSRYAVATAVRLGFTGERLEEIRLGAELHD
                     IGKIGTREAVLNKPGPLTAEEFQHITEHTILGERILAPLARENPTVLTIVRHHHERMD
                     GTGFPDRLPGDRIPLEARIVCVVDAFDAMTTNRAYRESRTPVAAFEELRRCAGSHFDP
                     EVVKAFLAAFPDPAVLPLPV"
     gene            1422..>1788
                     /locus_tag="VLD58_06890"
     CDS             1422..>1788
                     /locus_tag="VLD58_06890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HSB54063.1"
                     /translation="MTRINDHDTQHGFATRAVHAGPLPDPLAGAVMPPIYQTSTYAQE
                     GLGRHKGYEYGRTQNPTREALERAVASLEGATHGFAFGSGLAALDAVLKLLSAGDHIV
                     SGENIYGGSHRLMERVYGRF"
BASE COUNT          277 a          639 c          584 g          288 t
ORIGIN      
        1 gcctcggcgc cggacgaggc ctgaatgcag gagagcccca tggcctcgag gacgtgggcc
       61 atggcctgcc gcacgtcggc atcgtcgtct atcaggagac agacggccga ctgggccagg
      121 gtagacggag ggatctccgt ctgatagccc gcggcggtcg cggccgtcag gtcgccgcgc
      181 cggcggtgag gtggaaggtt ggacacaact gagtgtcgct gccactcaga gtgcccggcg
      241 gtgactcagg tcaccatgct gctgtatcgg atcctacacc ggcaaaggta agacagccgg
      301 gtccgggaat gcggccagaa acgctttcac cacctcggga tcgaagtgac ttccggcgca
      361 acgccgcaac tcctcgaacg ccgcaaccgg ggtgcggctc tcacggtagg cgcgattcgt
      421 cgtcatggcg tcgaaggcgt cgaccacgca gacgatgcgc gcctcgaggg gaatccggtc
      481 cccggggagc ctgtccggaa aaccggttcc atccatccgc tcatgatggt ggcgcacgat
      541 ggtgagcacc gtcgggttct cccgcgccag cggtgccagg atccgctcac ccagaatcgt
      601 gtgctcggtg atgtgctgga attcctccgc ggtgagcggc ccgggcttgt tgagcaccgc
      661 ctcccgggtt ccgatcttcc cgatatcgtg cagctccgct ccgagcctga tttcctccag
      721 ccgctcgccg gtgaagccga gccggacggc cgtggccacg gcgtagcggc tgacccgcat
      781 cgagtggccg cgcgtatagg cgtccttggc ttcgagcgcg tgcgccaggg tctgcacgcc
      841 ctggagaaac aactccttga tgcggcccgc ctgcagcctc acccggtgct ccaggttccg
      901 ctggtagaac cggcgctgca gcagcaggtc gcgcttctcc agcgccttgg ccagccgggc
      961 ccggacctcg tccagcatgg cgggcttggc gatatagtcg agcgccccct tgtccaggca
     1021 ggcgacggcg gtcttcacgt cggccacgcc ggacagcatg agcaccgcgg tgtcgggata
     1081 gcggcgctgc acctcctcca gcaggcccag gccggagagc cccggcatgt tgacgtcgct
     1141 gatgatgagc ggcacctcgc cctgggccgc cagcaggtcg agcgcctcgc gcccgttttc
     1201 cgccagcagc ggggagaggc ccatcgcctc ggtcaccttg ccgatgctct tgcgcaccgc
     1261 cgcatcatcg tccaccacca tgcagcgtgg cgcgatcggc ttcgattcag cccgttcggg
     1321 cgccagttcg gttcccatta tttccccccg cgactcgctg cattgccttg ctgcgggcgg
     1381 cacgcccgaa taaccttccc gcgactctga cccgcgaccg gatgacccgg atcaacgacc
     1441 acgacaccca gcacggtttt gccacccgcg ccgtgcacgc cggaccgctc cccgatccgc
     1501 tggcgggggc ggtcatgccc cccatctacc agacctccac ctacgcccag gaagggctcg
     1561 gccggcacaa gggatacgag tacggccgga cccagaaccc gacgcgcgag gcgctggagc
     1621 gggcggtcgc gagcctggaa ggcgccaccc acggcttcgc cttcggctcg ggcctcgccg
     1681 cgctcgatgc ggtgctcaag ctgctctccg ccggcgatca catcgtctcc ggcgaaaaca
     1741 tctacggcgg ctcccaccgg ttgatggagc gggtctacgg ccgcttcg
//
LOCUS       DATIFF010000462         2217 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1291674, whole genome shotgun sequence.
ACCESSION   DATIFF010000462 DATIFF010000000
VERSION     DATIFF010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1291674"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..901)
                     /locus_tag="VLD58_06895"
     CDS             complement(<1..901)
                     /locus_tag="VLD58_06895"
                     /inference="COORDINATES: protein motif:HMM:NF014408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine dehydrogenase
                     (aminomethyl-transferring)"
                     /protein_id="HSB54064.1"
                     /translation="MTDTAASNQTDRSYTLLRTERFVSRHIGPRRTEVQEMLDILGYE
                     SLDRFIDAVVPEDIRLRRPLDLPPNRSEREVLQALRGISSQNRLTRSYIGMGYYGTFT
                     PQVIQRNILENPGWYTAYTPYQAEIAQGRLEALLNFQTMVADLTGLPVANASLLDEST
                     AAAEAMNLSLAVKRPSGTPVYLVDKGCHPQTIAVIQTRAEARGVEVRLGTASQFVFDT
                     SVIGCLVQYPSTDGGVDDYRGVCQKAHEAGALVTVATDLLALTLLTPPGEWGADIAIG
                     NSQRFGVPMGYGGPHAAFFATREA"
     gene            complement(1005..1394)
                     /gene="gcvH"
                     /locus_tag="VLD58_06900"
     CDS             complement(1005..1394)
                     /gene="gcvH"
                     /locus_tag="VLD58_06900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HSB54065.1"
                     /translation="MANIPSDLLYTPEHEYVRRTKDPAIVEIGITDYAQGELGDVVFI
                     ELPKPGASFTKMGVFGTVEAVKAVSELFCPVAGEVVESNAALDSDPATVNRDPYGAGW
                     MIRLKLSNPADLNDLLKADAYEAKIGG"
     gene            complement(1464..2093)
                     /gene="coaE"
                     /locus_tag="VLD58_06905"
     CDS             complement(1464..2093)
                     /gene="coaE"
                     /locus_tag="VLD58_06905"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: protein motif:HMM:TIGR00152.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HSB54066.1"
                     /translation="MLSVALTGNIAAGKSRVAELFARWGATVIDADRLVRELQTPGTP
                     EFAAIVERFGQGILTPGRTLDRAALRRIVLADPAARHDLEAILHPAVDLRRTALEAEA
                     SARGAQIVINDIPLLFETLDPARFDAVVLVDAPEPLRLARLMSARGLSESEARGMIAT
                     QMPAESKRRWRHPSGRAPFVIDNDTDLATLEQRTRAVWQALEALADARA"
BASE COUNT          348 a          681 c          833 g          355 t
ORIGIN      
        1 aggcctcgcg ggtggcgaag aaggcggcgt gcggcccgcc gtagcccatc ggtaccccga
       61 accgctggct gttgccgatg gcgatgtcgg cgccccactc gcccgggggc gtgagcagcg
      121 tcagcgccag caggtcggtg gcgacggtga cgagcgcgcc ggcctcgtgc gccttctggc
      181 agacgccacg gtagtcatcg acgccgccgt cggtcgaggg gtactgcacc aggcagccga
      241 tgacggaggt gtcgaacacg aactgggacg ctgtgcccag ccgcacctct actccgcggg
      301 cctcggcccg ggtctggatc accgcgatgg tctggggatg gcagcccttg tcgaccaggt
      361 agaccggcgt gccgctgggc cgcttcacgg ccagcgagag gttcatcgcc tcggccgcgg
      421 cggtcgattc atccagcagc gaggcattcg ccaccgggag acccgtgagg tcggccacca
      481 tcgtctggaa gttgagcagc gcctcgagtc ggccctgcgc gatctccgcc tggtacgggg
      541 tgtaggcagt gtaccagccg gggttttcca ggatgttccg ctggatcacc tgcggcgtga
      601 aggtcccgta gtagcccatc ccgatgtacg agcgggtgag ccggttctgg ctcgagatgc
      661 cgcgcagcgc ctggagcact tcccgctccg accggttggg cggcagatcg agcggacgcc
      721 ggagccggat gtcttccggg accaccgcgt cgatgaagcg gtcgagcgat tcgtagccca
      781 ggatgtcgag catctcctgc acctcggtcc gtcgagggcc gatgtggcgg gagacgaagc
      841 gctcggtgcg gagcagggtg taggagcggt cggtctggtt ggacgcggcg gtgtcggtca
      901 tggtcggaat cagagctcag gagtcggtcg ggccggacat acaaacgccc cgcggaacgg
      961 cagcggggcg ttcggactaa gaggagtaca accggagttg gcgttcatcc gccgatcttg
     1021 gcctcatacg cgtcggcctt gagcaggtcg ttgaggtcgg cgggattcga caacttgagg
     1081 cggatcatcc agccggcgcc gtacgggtcg cggttgaccg tcgcggggtc gctgtcgagc
     1141 gccgcgttgg attccaccac ctcgccggcc accgggcaga agagctcgga caccgccttc
     1201 accgcctcca ccgtgccgaa gacgcccatc ttggtgaagc tggcgcccgg cttggggagc
     1261 tcgatgaaga ccacgtcgcc caactcgccc tgggcatagt cggtgatccc gatctcgacg
     1321 atcgcgggat ccttggtccg acggacgtac tcgtgttcgg gagtatagag aagatcggaa
     1381 ggaatattgg ccacgaattg ctccggattg cgtgccgcaa gtctagacga ccctcggggg
     1441 agtatcaagt aggggcactg agttcatgct ctggcgtcgg ccagggcctc cagcgcctgc
     1501 cacacggcgc gggtgcgctg ttccagagtg gcaagatcgg tgtcgttgtc gatgacgaag
     1561 ggggcgcgcc cggacgggtg ccgccagcgg cgcttggact cggccggcat ctgggtcgca
     1621 atcattcccc gcgcctcgga ttccgagagc ccgcgggcac tcatgaggcg tgccaggcgc
     1681 aatggctccg gggcatcgac caggaccacc gcgtcgaagc gtgccggatc gagggtctcg
     1741 aagagcaggg gaatatcgtt gatgacgatc tgcgcgcccc gggcactggc ctcggcctcg
     1801 agggcggtgc ggcggagatc gacggcgggg tggagaatgg cctcgaggtc gtggcgggcg
     1861 gcgggatcgg ccaggacgat ccggcggagg gcggcgcggt cgagagttcg gccgggcgtg
     1921 agaatgccct gcccgaatcg ttctacgatg gcggcgaact cgggagtccc cggggtttgc
     1981 agctcgcgca ccagccggtc ggcgtcgatc accgtggcgc cccagcgcgc gaacagctcg
     2041 gcgaccctcg attttcccgc ggcgatgttg ccggtgagtg cgacggagag catgggggga
     2101 aagtggggcg gaggccggag gcaggaggcc ggagcaggtc tgagatcggg atggttgctt
     2161 gcgggaggcg gactagggcc ggagcaactc cggcctccgg cctccggcca ccggcct
//
LOCUS       DATIFF010000463         1125 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_675768, whole genome shotgun sequence.
ACCESSION   DATIFF010000463 DATIFF010000000
VERSION     DATIFF010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_675768"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..283
                     /locus_tag="VLD58_06910"
     CDS             <1..283
                     /locus_tag="VLD58_06910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54067.1"
                     /translation="SENLTWVSVPVGQTGALAITALRDGAGVFGIPLTIASSASSIAL
                     STAGCRPPSMDLHCDVYSDGWVVGVSPGDAQVTITGRNITKQFTAHVEP"
     gene            394..>1125
                     /locus_tag="VLD58_06915"
     CDS             394..>1125
                     /locus_tag="VLD58_06915"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB54068.1"
                     /translation="MPDTLPIQTALGDAYLLEHTLGRGGMATVYLARDLRHGRNVAVK
                     VMRPELATTAVAAGRFLREIHVAARLQHPHIIPMLDSGEARGQLWYAMPYIRGESLRD
                     LLDRDPALPIGVAVELARQIALALDYAHREGIVHRDLKPENVLLSDGQALIADFGLAK
                     ALEAGGDRLTGNGVAVGTAGYMSPEQASSGDVDGRSDLYSLGCLLYEMLAGEAPFTGA
                     TVQEIIAQRFEMPPPSVREVRAEVPA"
BASE COUNT          174 a          396 c          391 g          164 t
ORIGIN      
        1 gtccgagaac ctcacctggg tttcggtgcc ggtcggtcag accggtgcgc tggccatcac
       61 cgccctgcgg gacggcgccg gcgtgttcgg gatcccgctc accatcgcct cgagcgcctc
      121 gagtatcgcc ctgagcaccg caggatgccg accgccgagc atggatctgc actgcgacgt
      181 gtacagcgac ggctgggtcg tcggggtctc gccgggagat gcccaggtga ccatcaccgg
      241 gcggaacatc accaagcagt ttacagcgca tgtggaaccg tgatataggc acccaggcca
      301 ccttgccacg tcgagggccc gggcgggaaa aggcatctgg ccggtccggc gccgggctgc
      361 taggatagat cgtagcattc gctggacttc gccgtgcccg ataccctgcc gatccagacc
      421 gccctgggtg atgcctacct gctcgagcac acactcggac gaggcggcat ggccacggtg
      481 tacctggcgc gcgacctccg gcacggcagg aatgtagcgg tcaaggtcat gcgccccgag
      541 ctcgcgacta ccgcagtggc ggcggggcgg ttcctgcgcg agatccacgt cgccgcccgg
      601 ctccagcacc cccacatcat ccccatgctc gactcgggag aggcccgcgg ccagctctgg
      661 tacgccatgc cctatatccg aggcgagtcg ctgcgcgacc tgctggaccg ggacccggcc
      721 ctgccgatcg gcgtcgcggt ggagctggcc cgccagatcg cgctggcgct cgactacgcc
      781 caccgcgagg gaatcgtcca ccgggatctc aagcccgaga acgtgctgct cagcgacggg
      841 caggcgctga tcgccgactt cggcctggcg aaggcgctgg aggccggcgg ggaccgcctg
      901 accggcaacg gggtcgcggt cgggacggcg ggctacatga gcccggagca ggcgagctcc
      961 ggggatgtgg acgggcgctc cgacctctac tccctcggct gcctgctcta cgagatgctg
     1021 gccggggagg cccccttcac cggtgcgacc gtccaggaga tcatcgccca gcgcttcgag
     1081 atgcccccac cgtcggtgcg ggaggtgcgc gccgaggtgc cggca
//
LOCUS       DATIFF010000464         3647 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1445269, whole genome shotgun sequence.
ACCESSION   DATIFF010000464 DATIFF010000000
VERSION     DATIFF010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3647
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1445269"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1221)
                     /locus_tag="VLD58_06920"
     CDS             complement(<1..1221)
                     /locus_tag="VLD58_06920"
                     /inference="COORDINATES: protein motif:HMM:NF021619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PocR ligand-binding domain-containing protein"
                     /protein_id="HSB54069.1"
                     /translation="MTECSVEGEGMPHRATELLPRADLERLLECMYRLTGLPCTLLDS
                     GGQVLVSVGRQDVCTRFPCATGETVRGCLAEQPPPQHLQEGRILALTCPHGLMEHATP
                     ITVRGRHLAVLLVGQFLHAPPDEEAFRRRAQAAGFDAEAYLAAVRRVPVISEERVHAI
                     LEVQAELARVLAALGLERAYLQDTRRHVRESEQRFRAIANHGRNWEDWIGPDGKLIWV
                     SPAIERISGYRLEECLTLPDYPMSLVVEEDRDGVRRHLRAVLEGVGAPGEIEFRIQGK
                     HGVTVWGLGGWQAIRDGAGTHLGCRGSIQDISARKRAEAELLARTRQLEAAYHTAREI
                     TQELDLRVVLQLICRRAATIAGAEGGGIFLWSHEAGHLVPHAGFQETGREAGREFVKP
                     GEGLVGRVAARRQGL"
     gene            complement(1273..1398)
                     /locus_tag="VLD58_06925"
     CDS             complement(1273..1398)
                     /locus_tag="VLD58_06925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54070.1"
                     /translation="MTIDRQVREREGVAFSLWRGGPVLFDLDGLLARRARVPAAA"
     gene            complement(1439..1927)
                     /locus_tag="VLD58_06930"
     CDS             complement(1439..1927)
                     /locus_tag="VLD58_06930"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSB54071.1"
                     /translation="MAKRQNDRRQSGGYRRILWPTDFSPVAKAAVPHALRLADADAEL
                     VILHVWAPPVMVAPPPAPGVSWVRLDKELREAAREQLQRATEDVRARGGKVRVRNLLV
                     QGAPVAQISRVAKRLACDLIVLATHGRTGLRHVLLGSVAENVVRYAPCPVLTVRPGRA
                     PK"
     gene            complement(2142..2813)
                     /locus_tag="VLD58_06935"
     CDS             complement(2142..2813)
                     /locus_tag="VLD58_06935"
                     /inference="COORDINATES: protein motif:HMM:NF017373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54072.1"
                     /translation="MSQNQAAGVLAGFAGRVSDFLPTLAVGLLLIGLGLVAGWVAKRV
                     VIRVLIWLRLDRLAGRVGWRAAFSKGDVRAALYNLLGTLAMLLVVLIFLDNALELLGL
                     TVVSRMLDRLVFYVPNLGLVGVIVGVGVLVSNAVAEQVEEALEEEFHYARLIAKLVKG
                     VLLSIVTAIALWQLDLAREIVLTAFLIGFGAVGVAFALSVGLGSAKIIQHGWEKLFEE
                     RKDKE"
     gene            complement(2818..>3647)
                     /locus_tag="VLD58_06940"
     CDS             complement(2818..>3647)
                     /locus_tag="VLD58_06940"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSB54073.1"
                     /translation="VTSGRTLESLMEVGLAIAKGHHGELIVMTVAEVPEGESLMAGRR
                     LIRHAEPLLERAVRYAKDRGVAAYPVVKIGRRVSHGIVETAREEQCNFLILGQPETQS
                     FLERVFASTVEHVLRDSPCQVGVVYGRIRAGEVREIVVPVTKGDNSRLAAGLGRVFAE
                     WFEVPARALTVVQRGTPQEEAETLEAGARETLQAAGLDIELEVLSRRDPARGLAATMK
                     KGDLVLIGAPSMSPVAVILGGTVPAAIVGRRLTPVVVVRDVEERRASRFERLFFRRS"
BASE COUNT          569 a         1394 c         1167 g          517 t
ORIGIN      
        1 cagaccctgc cgccgcgcgg ccacgcgccc cacgagcccc tcgcccggct tcacgaactc
       61 ccggccggcc tcgcgccccg tctcctggaa gccggcgtgg ggaaccaggt gaccggcctc
      121 gtggctccac aggaagatgc cgccgccctc tgccccggcg atcgtggccg cccgccggca
      181 gatgagctgc agcacgacgc gcagatcgag ttcctgcgtg atctcccgtg ccgtgtggta
      241 ggcggcctcg agctgccggg tgcgcgcgag caactccgcc tcggcgcgct tccgggctga
      301 aatgtcctgg atgctcccgc ggcaccccag gtgcgttccc gcgccgtcgc ggatcgcctg
      361 ccaaccgccc agaccccaca ccgtcacgcc gtgcttccct tggatgcgaa actcgatctc
      421 acccggcgcg ccaacgcctt ccagcactgc ccggaggtgg cgccgcaccc cgtcccgatc
      481 ctcctcgacc accagggaca tcgggtagtc cggcagagtg aggcactcct cgagccggta
      541 cccgctgatc cgctcgatcg ccgggctgac ccagatcagt tttccatccg ggccgatcca
      601 gtcctcccag ttccgcccgt ggttggcgat tgcgcggaag cgctgctcgc tttcccggac
      661 gtggcggcgc gtgtcctgca gatacgcgcg ctccagtccc agcgcggcca ggacccgggc
      721 cagctcggcc tggacctcca ggatggcgtg cacccgctcc tcggatatga caggcacgcg
      781 gcgcaccgcc gcgaggtacg cctccgcgtc gaagcccgcg gcctgggccc ggcgccggaa
      841 cgcttcctcg tccgggggtg cgtggagaaa ctggccaacg agcaggaccg cgaggtgccg
      901 gccgcggacg gtgatgggcg tcgcgtgctc catgaggccg tgggggcagg tgagcgcgag
      961 gatccggcct tcctggagat gctggggcgg cggctgctcg gccaggcacc cgcggacggt
     1021 ctctcccgtc gcgcaaggga accgcgtgca tacgtcctgc cggccgaccg acaccagaac
     1081 ctgcccgccg ctatccagga gggtgcaggg caggccggtc aagcgataca tgcattcgag
     1141 cagccgctca aggtctgccc gtgggaggag ttccgtcgcc cggtgcggca tgccctcgcc
     1201 ctcgacggag cattcggtca agataccgca tgatagcaag gacgaggccg cccttcaatg
     1261 accaggttcc gctcaggccg ccgcgggcac ccgggccctc cgcgcgagga gtccgtcgag
     1321 atcgaagagg acggggccac cacgccagag cgagaacgcg acgccctccc gctcgcgcac
     1381 ctgcctgtcg atcgtcatcc agcccctcgc ccctccggcc ggctcaccac gcctcaggtc
     1441 acttcggcgc cctgccaggc cgcacggtga gcaccgggca gggggcgtac cggacgacat
     1501 tctccgccac gctgcccagg aggacgtggc ggaggccggt gcggccgtgc gtggccagca
     1561 cgatgaggtc gcaggcgagc cgcttcgcca cccgcgagat ctgtgcgacg ggggcgccct
     1621 ggaccaggag gttccggacc cgcaccttcc ctcctcttgc tctcacatcc tccgtcgccc
     1681 gctgaagctg ctcccgcgcc gcctcgcgca gctccttgtc gagtctgacc cagctcaccc
     1741 ccggcgccgg cgggggggcg accatcacgg gcggcgccca gacgtgcagg atcacgagct
     1801 cggcgtcggc gtccgccagc cgcagcgcat gggggacggc tgccttcgcc accggcgaga
     1861 agtcggtcgg ccagaggatt ctccgatagc ctcccgattg gcgtcggtcg ttctgacgct
     1921 tcgccatgat cccacctcct cctctgctca ggagccggaa gcgtctccgc gagcccaccg
     1981 gacgatcctt ccaccggatt agcggcggcg ccagccgctc caggtgggga aaccggaggc
     2041 gtcccggagc acgaggaggg acatccggcg gtcacacgag agcggcggtc cctcggtctc
     2101 accggcacag gtcagccatg ggtcgaggcg gcccggcgct gttactcctt gtccttgcgc
     2161 tcctcgaata gcttttccca cccatgctgg atgatcttcg cggaccccag acccaccgag
     2221 agggcaaagg ccacgcctac ggcgccgaac ccgatcaaga aggccgtcaa gacgatctct
     2281 cgagccagat ccaactgcca gagggcgatg gcggtcacga tcgagagcag cacgcccttg
     2341 acaagcttgg cgatgagtcg cgcatagtgg aactcctcct ccagcgcctc ttccacctgc
     2401 tccgccaccg cgttggacac caggacgccc acccccacga tcaccccgac cagcccgaga
     2461 ttgggcacgt agaagaccag ccggtccagc atccgggaca cgaccgtgag gcccagaagc
     2521 tccagtgcgt tgtcaaggaa gatcagcacc acgagcagca tcgccagcgt gccgaggagg
     2581 ttgtacagcg ccgcgcgcac atcgcccttg ctgaaggccg cgcgccaacc cacccggcct
     2641 gccaggcggt ccagacggag ccagatcagg acccggatca ccacccgctt ggcgacccac
     2701 cctgcgacca acccgaggcc gatgagcagc agccccacgg ccagcgtggg gaggaagtcc
     2761 gacacccgtc cggcaaaacc cgccaacaca ccggctgcct ggttctggga catggcgcta
     2821 gctcctccgg aagaacagcc gctcgaagcg gctggcgcgg cgctcctcca cgtcgcggac
     2881 gacgacgacc ggggtcagtc tccggcccac gatcgctgcg gggacggtcc cgcccaggat
     2941 aactgccacc gggctcatgc tgggagcgcc gatcaggacc aggtcccctt tcttcatcgt
     3001 ggcggcgagt ccccgcgccg ggtcgcgccg ggacagcacc tccagctcga tgtccaggcc
     3061 ggccgcctgt agtgtttctc gcgcccccgc ctccagcgtc tcggcctcct cctgtggtgt
     3121 cccccgctgc acgaccgtga gtgcgcgggc cggcacctcg aaccactccg cgaagacgcg
     3181 gccgagtccc gcggccagcc gcgagttgtc gcccttggtc accggcacga cgatctcccg
     3241 cacttccccc gctcggatgc ggccgtacac cacccccacc tggcagggcg aatcgcgcag
     3301 aacgtgctcg accgtcgagg cgaaaacccg ctccaggaag gactgggtct cgggctgtcc
     3361 caggatcagg aaattgcact gctcctcgcg cgccgtctcg acgatcccgt ggctcacccg
     3421 ccgcccgatc ttcaccacgg gataggcggc gacccctcga tccttggcgt accgcaccgc
     3481 gcgctcgagc agcggctcgg cgtgccggat caggcgccgg cccgccatca ggctctcccc
     3541 ctcgggcacc tcggccaccg tcatgacgat cagttctccg tggtggccct tggcgatggc
     3601 gaggcccacc tccatcaggg attccagggt gcgaccgctg gtgacgg
//
LOCUS       DATIFF010000465         4292 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2214354, whole genome shotgun sequence.
ACCESSION   DATIFF010000465 DATIFF010000000
VERSION     DATIFF010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4292
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2214354"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(107..949)
                     /locus_tag="VLD58_06945"
     CDS             complement(107..949)
                     /locus_tag="VLD58_06945"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSB54074.1"
                     /translation="MTVASTPAIDLASIKRRQQTTWASGDYASVAARIPIVAERLCDA
                     ADIHAGDRVLDVATGTGNAALAAARCGAVVTGVDYVPALLDRGRIRATAEGLEVDYQE
                     GDAEALPFADNSFDAVLSVFGVMFAPDQEKAAAELLRVCRPGGTIALACWTPDGFIGE
                     MFRTMARHVPPPSGLRSPMEWGSEERLRQLFGSGLTALLVQPRTYTFRFRSAGEYVDF
                     FRQYYGPTLKAYATMDEAGQQRLTRDLEDVVRRFDRRGSVGPIAVPGMYLEVIGIKGQ
                     ATPR"
     gene            1192..1746
                     /locus_tag="VLD58_06950"
     CDS             1192..1746
                     /locus_tag="VLD58_06950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54075.1"
                     /translation="MRALGHTFILAALWAGPVSGQALAPETGAVGELRRSGGPTELVL
                     GTTTIQQVRQLYASRQLHEALANARAPRTLSPAPRWRMGGATIAPRYRVDGADGFYTL
                     SFDASERLVLAVNDQPRERLSRAEFQARYPKAKLAQHVGQASILEVALEPCVTMSAMF
                     TGPGATLTQAGYGYTCGNLVPASD"
     gene            1941..4151
                     /locus_tag="VLD58_06955"
     CDS             1941..4151
                     /locus_tag="VLD58_06955"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HSB54076.1"
                     /translation="MATPLPARPSLDWLRKRAKLTLKQLRLSKPATRLAEAQLALARE
                     HGFPSWRALKAHVDQLRHQSSAPAVPLTEELIARFLKLVRNGDLQQVRQLLADQPGLI
                     NATGPHPFWGGRPQPLHLAIEGGHRAMVDLLLRAGADPNGSNEEYMHWSPLMLTMREG
                     RAPFRQMLLRRGARIGLVEALMQGDDRTVMRVLKRGRSALPAVTPNDGSLLMFARTTR
                     AIDRLLELGVPADQRDAWGTTPVEAFSRLGREGRPLVRHLTEKGVRAEPAEFARMGDR
                     PGLVRLARDNPAVLREDAVLMGAVDFRHHALVRWLLSQGANPNARTTAGSGQTVLHSA
                     AWNGDLAMVKLLVGAGADPTLRDRQYDATPLGWAETAIEITANPRCRTVADWLGALEQ
                     RAAGHDDAPAKRTVWKPIMEAAFNGDGATVRRLLEAGADPNVLSNSTQRHRPLHRAIE
                     HKKTFPKHNGHDEVVRVLLAAGADPRKRALASRLTALALAAMDEPRFVPLLLPKAGAL
                     DLFHAAVVLDLERVRVLLAAGSDARATDINTMAPLHYLAASRMFTLSPDHRLRQLRIA
                     EALVQAGADVNAGHAYAASEWTLTPLYHACGYQDNPALAEWLLLRGASAADGETVYHA
                     ADEGHEGALAVLARKLPPKVLADEATAALPGLLRWGRVRATPWLLAHGADVNIVHPHW
                     GDAALHAAARAGVGAGTVEVLLKHGARKDLKNREGKTAREIARQAGNAKLAELL"
BASE COUNT          694 a         1489 c         1481 g          628 t
ORIGIN      
        1 tgaggtggag cggcacccgg acgcgcaatc ttctttatcg cggtctggaa gacacccgcc
       61 gcaagctgac ccaactcggc ctgggaccgg tgcgggaagg tctgggtcag cgcggcgtcg
      121 cctgaccctt gatcccgatc acttcgaggt acatccccgg caccgcgatc gggccgacac
      181 tcccgcgccg gtcaaagcgc cgcaccacgt cctcgagatc acgggtgagc cgctgctgcc
      241 cggcttcatc catcgtggcg taggccttga gggtcgggcc gtagtactga cggaagaagt
      301 cgacgtattc ccccgcggaa cggaaccgga aggtgtaggt ccggggctgc accaggagcg
      361 cggtgagccc gctgccgaag agctgccgca gacgctcctc gcttccccat tccatcggcg
      421 atcgcaggcc cgagggcggc ggcacatgcc gcgccatcgt ccggaacatc tccccgatga
      481 acccatccgg tgtccagcac gccagggcga tcgtcccacc cggccggcag acccggagca
      541 actcggccgc tgccttctcc tggtcgggcg cgaacatcac gccgaacacc gaaagcaccg
      601 cgtcgaagct gttgtccgcg aacggcagcg cctcggcatc gccctcctga tagtcgacct
      661 cgagtccctc ggcggtcgca cggatccggc cccggtcgag gagcgccggt acgtagtcga
      721 cgccggtgac gacggcgccg caacgggcgg cggccagcgc ggcgttgccg gtgccggtcg
      781 ccacgtcgag cacccggtct cccgcatgaa tgtccgcggc atcacagagc cgttccgcca
      841 cgatggggat tcgggcggca acggaggcgt agtcaccgct ggcccaggtg gtctgctggc
      901 ggcgcttgat gctggcgagg tcgatcgctg gagtgctggc gacggtcatg atggcatccc
      961 tcgatgggta aacgttggtc gtctctgggg gatgcgtggc ggtgggccgg aaaccgacat
     1021 ccggtgcggg gggtgggctg ccagcattcg ccgcagggtg ccgggtgagg ccagtcacac
     1081 ggtctcggcc gggaagtgcg gcacattgtg gggcaacagg ttagcccttc ggctcaagcg
     1141 ggtacgcccg ttgccggata gagggctgtt ccccaaacag tcgagctggt catgcgtgcg
     1201 ctgggtcaca cattcatact cgcggctctc tgggccggac cggtctcggg ccaggcactc
     1261 gcaccggaaa ccggcgccgt gggcgagctc cgccgcagcg gtggccccac cgagctggtg
     1321 ctcggcacca ccacgatcca gcaggtccgt cagctctatg ccagccgcca gttgcacgag
     1381 gccctggcca acgcccgcgc cccccggacc ctctcacccg cgccccgctg gcgcatgggc
     1441 ggcgcgacca tcgccccgcg ctaccgggtc gacggcgccg acgggttcta caccctctcc
     1501 ttcgatgcct cggaacgcct ggtcctcgcg gtgaatgatc aaccccgcga gcggctcagc
     1561 cgcgccgagt tccaggcccg ctaccccaag gcgaagctgg cgcagcatgt cggccaggcc
     1621 agcatcctcg aggtcgcgct cgagccgtgc gtgacgatga gtgccatgtt caccggtccc
     1681 ggcgcgacgc tcacccaggc gggctacggg tacacctgcg gcaatctggt ccccgcctcc
     1741 gactagtccc gaaacaagcg gcggcccctg gggccgctgg ccggctgctg gtccgcgcgg
     1801 tacattcccg tcggccgtgc gagcggccga cggtccgcgt aaagggctcc aggccccctc
     1861 gtcgcgcagt ccccaatccg accttcttcc tgcccgtctg accgcggacc tcgggcgctg
     1921 tccaggaagg aaggttttcg atggcgacgc cactcccggc gcgtcccagc ctcgactggc
     1981 tgcggaagcg cgccaagctc accctcaaac aactccgact ttcgaagccc gccacccgcc
     2041 tcgccgaggc gcaactggcg ctggcccgcg agcacggctt ccccagctgg cgcgcgctca
     2101 aggctcacgt cgaccagctg cgccaccagt cgagcgcgcc ggcggtgccg ctcaccgagg
     2161 aactgatcgc ccgcttcctc aagctggtca ggaacggcga tctccagcag gtccgccagc
     2221 tgcttgctga ccaacccgga ctgatcaacg cgacgggtcc ccatccgttc tggggcggcc
     2281 gtccccagcc gctccacctg gcgatcgagg ggggccatcg cgcgatggtc gacctgctgc
     2341 tcagagccgg cgccgatccc aacggcagca acgaggaata catgcactgg tcgccgctga
     2401 tgctgacgat gcgggaggga cgggcgccgt tccggcagat gctgctccgt cgcggggccc
     2461 ggatcgggct ggtcgaggcg ctgatgcagg gtgacgaccg taccgtcatg cgggtgctca
     2521 aacgggggcg gtccgcctta ccggcggtca cgccgaacga cggctcgctg ctcatgttcg
     2581 cgcggaccac gagggccatc gatcgactgc tggaactggg ggtgccggcc gaccagcgcg
     2641 acgcctgggg cacgactcca gtggaggcat tcagccgcct cggacgtgag ggccggccgc
     2701 tggtgcggca tctcaccgag aaaggagtgc gcgcggagcc ggccgagttt gcgcgaatgg
     2761 gagatcgccc cggtctggtc cgcctggccc gggacaaccc cgccgtgctg cgggaagatg
     2821 cggtgctgat gggcgcggta gacttccgtc atcacgcgct ggtgcgctgg ctactcagtc
     2881 agggagccaa ccccaacgcg aggacgacgg ccggatcggg gcagaccgtg ctccattccg
     2941 ccgcgtggaa tggcgacctt gccatggtga agctgctggt gggagcgggc gccgatccaa
     3001 ctctgcgcga ccggcagtac gatgccaccc cactcggctg ggccgagacc gcgatcgaaa
     3061 taaccgcgaa cccgaggtgc cgcaccgtcg ccgactggct cggcgccctg gagcagcgcg
     3121 ccgccgggca tgacgatgcg cccgcgaagc gcacggtctg gaagccgatc atggaggcag
     3181 cgttcaacgg cgatggggcc acggtgcggc ggctcctcga ggctggcgcc gatcccaacg
     3241 tgctcagcaa ctccacccag cggcaccggc cgctccaccg cgccatcgag cacaagaaga
     3301 cgttccccaa acacaacggc cacgacgagg tggttcgcgt cctcctcgct gccggagcag
     3361 atcctcgcaa gcgggccttg gccagccggc tgaccgcgct cgctctcgct gcgatggacg
     3421 agccgcgctt cgtgccgctg ctgctgccca aggctggggc gctcgatctc ttccacgccg
     3481 ccgtggtgct cgacctcgaa cgggtgcgtg tcctgctggc cgcgggcagc gacgcccggg
     3541 ccaccgatat caataccatg gccccgctgc actatctggc ggcgtcccgc atgttcacac
     3601 tgtcgcccga ccaccggctg cgacagctcc ggatcgccga ggcactggtg caggccggcg
     3661 ccgatgtgaa cgccggacac gcctatgccg ccagcgagtg gaccctcacc ccgctgtatc
     3721 acgcctgtgg ctatcaggac aacccggcgc tggcggagtg gctgttactc cgtggggcca
     3781 gcgccgccga tggcgagacc gtctatcacg ccgccgacga gggacacgaa ggtgccctgg
     3841 cggtgctggc ccggaaactc ccgccgaagg tgctcgccga cgaggccacc gcggcgctgc
     3901 caggattgct gcggtgggga cgggtgcggg ccacaccctg gttgctggcc cacggcgcgg
     3961 atgtcaacat cgtccacccg cactggggag acgcagcgct ccacgccgcg gcccgggctg
     4021 gcgttggcgc cgggacggtg gaagtgcttc tcaaacacgg ggcccggaag gatctcaaga
     4081 accgggaggg aaagaccgcg agggagatcg cgcggcaggc ggggaacgcg aagctggcag
     4141 agctgctgta ggagggaggg ggtaggagtg aggagtaggg agtgaggagt aagaagtaag
     4201 aagtgagaag ggagaaggga gaagggagaa gggagaaggg agaagggagt atgcgacgtt
     4261 cctccttatt acttcgttcc tccttcttac tt
//
LOCUS       DATIFF010000466         1266 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_368442, whole genome shotgun sequence.
ACCESSION   DATIFF010000466 DATIFF010000000
VERSION     DATIFF010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_368442"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1266
                     /locus_tag="VLD58_06960"
     CDS             <1..>1266
                     /locus_tag="VLD58_06960"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HSB54077.1"
                     /translation="IPPNTLEAIDTSQLLGLVATGQALRDAGYGPEREFDRNRVSVIL
                     GVTGTLELVIPLGARLGHPVWRKALKEAGVNDTVAADVVERIADSYVSWQENSFPGLL
                     GNVVAGRISNRLDLGGTNCVVDAACASSFAAVHLALLELASGRSDTVITGGVDTLNDI
                     FMHMCFAKTQILSPTGDARPFSKNADGTVLGEGIGMLVLKRLPDAERDGNRIYAVIQG
                     IGSASDGRSQSIYSPRSEGQVKALEAAYTAAGIDPATVGLVEAHGTGTRVGDKVEFQA
                     LCQVMGKTAANGNRCALGSVKSMIGHTKAAAGAAGLVKAALAVYHKVLPPTLKADQPD
                     EALGLDASPFYLNTRSRPWLAADGRPRRAGVSAFGFGGSNFHLVIEEHRPEKASVAWD
                     GSVEIFAFSGQTRPELHRFMGEFIQRLPEP"
BASE COUNT          211 a          451 c          418 g          186 t
ORIGIN      
        1 atccccccga acaccctcga ggcgatcgac acctcccagc tcctcggcct ggtcgccacc
       61 ggccaggccc tgcgggacgc gggctacgga ccggaacggg aatttgaccg caaccgggtg
      121 agcgtgatcc tcggggtcac cggcaccctt gagctggtga tccctctcgg ggcgcgactc
      181 ggccaccccg tctggcggaa agccctgaag gaagccggtg tgaacgacac ggtcgccgcg
      241 gacgtggtgg agcgaatcgc cgattcctac gtctcctggc aggagaactc cttcccgggg
      301 ctgctcggca acgtggtggc cgggcgcatc agcaaccgcc tggacctggg cgggaccaac
      361 tgcgtggtgg acgccgcctg cgccagctcc tttgccgccg tgcacctggc gctgctggag
      421 cttgcctcgg ggcgcagcga cacggtgatc accggcggcg tcgacacgct gaacgacatc
      481 ttcatgcaca tgtgtttcgc caagacccag atcctctccc ccaccggcga cgcccggccg
      541 ttttccaaaa acgccgacgg aacggtgctc ggggagggca tcgggatgct ggtgctgaag
      601 cgcctgcccg acgccgaacg cgacggcaac cggatttacg ccgtgatcca ggggatcggc
      661 tcggcgagcg acggccgatc ccagagcatt tactcacccc gcagcgaggg gcaggtcaag
      721 gcgctcgagg cggcctacac ggcagccgga atcgacccgg ccacggtcgg gctggtggag
      781 gcccacggca caggtactcg cgtcggcgac aaggtggagt tccaggctct ctgccaggtc
      841 atgggaaaaa ccgccgccaa cggcaaccgc tgtgcactgg gctcggtcaa gtccatgatc
      901 ggccacacca aggctgcggc cggcgcggcc ggcctggtca aggccgccct ggccgtctac
      961 cacaaggtcc tgccgcccac cctcaaggcc gatcagccgg acgaggccct gggcctcgac
     1021 gcctcgccgt tttacctgaa cacccgctcc cgcccatggc tggccgccga cggacgcccc
     1081 cggcgcgcgg gggtcagcgc cttcggcttc ggcggaagca acttccacct ggtgatcgag
     1141 gaacaccgcc cggaaaaggc gagcgtggcc tgggacggct cggttgagat cttcgcgttt
     1201 tccggccaaa cccgccccga gctgcatcgt ttcatgggcg aattcatcca gcggctgccg
     1261 gagcct
//
LOCUS       DATIFF010000467         1334 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1752950, whole genome shotgun sequence.
ACCESSION   DATIFF010000467 DATIFF010000000
VERSION     DATIFF010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1334
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1752950"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            86..>1334
                     /gene="glgP"
                     /locus_tag="VLD58_06965"
     CDS             86..>1334
                     /gene="glgP"
                     /locus_tag="VLD58_06965"
                     /inference="COORDINATES: protein motif:HMM:TIGR02094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="HSB54078.1"
                     /translation="MAFSRVRIPYLPPRIEGLSALATNLWWSWNLDARLVFRRIDQPL
                     WHLTKHNPLELLRRVDPARLAACASDPGFLAIYDRVMDAFHRGVSTRNTWFQDRFPDL
                     TRPVAYFCAEFGLHNSVPIYSGGLGILAGDHLKAASDLGVPLVGVGLFYTKGYFDQRL
                     RIDGWQEDSDVQFDIETTPLERMSGPNGDPHLTVVRTFGRPVNIAAWRMLVGRVPVYL
                     LDTNLEQNDPADRDLSAKLYAGGPAMRLRQEWILGVGGVRVLRAAGIDPSAWHANEGH
                     AAFMLVERVRELVVSGKSFDEAVEEVRTRSVFTTHTPVPAGHDRFSKEQVLACAEPLW
                     EDLGIGPEEFLAIGNQPNDDLFHMTTTALRLSSRVNGVARRHGEVSRELWHQLWPQLK
                     VEDVPIGHVTNGVHLATWMSSRMF"
BASE COUNT          203 a          477 c          436 g          218 t
ORIGIN      
        1 ctggcgcacc gacgactccc ggcgctctcg gaaaccggct accttccgac tcgccagccc
       61 gcccccgaac gttgacccgg acttcatggc attctcgcgc gtgcggattc cctaccttcc
      121 cccccggatc gaaggtctct cggcgctggc caccaatctc tggtggagct ggaacctcga
      181 tgcccggctg gtgttccgcc ggatcgacca gccgctctgg catctcacca agcacaaccc
      241 gctggagctg ctgcgccggg tagacccggc ccggctggcg gcgtgcgcct cggatccggg
      301 cttcctcgcg atctatgacc gggtcatgga tgccttccac cggggcgtca gcacccggaa
      361 cacctggttc caggaccgct tccccgacct gacacgcccg gtcgcctact tctgcgccga
      421 gttcgggctg cacaactcgg tgccgatcta ctcgggcggc ctcgggatcc tggcgggcga
      481 tcatctgaag gccgcttccg acctgggcgt cccgctcgtg ggcgtgggac tgttctatac
      541 caagggctac ttcgaccagc ggctccggat cgacgggtgg caggaagaca gcgacgtcca
      601 gttcgacatc gagaccaccc cgctcgagcg gatgagcggc cccaatggcg atccgcacct
      661 gacggtggtc cggaccttcg ggcggccggt gaacatcgcg gcctggcgga tgctggtggg
      721 ccgggtgccg gtctacctgc tggataccaa cctcgaacag aacgatcccg ccgaccgcga
      781 tctctcggcc aagctctacg ccggcggccc cgccatgcgg ctccggcagg agtggatcct
      841 cggtgtgggc ggcgtccgcg tcctccgcgc cgcgggcatc gatccctcgg cgtggcacgc
      901 caacgagggc catgcggcat tcatgctggt ggagcgggtc cgtgagctcg tggtgagcgg
      961 caagtcgttc gacgaagcgg tggaggaggt gcgcacccgc agcgtcttca ccacgcacac
     1021 gccggtcccc gcggggcacg atcgcttcag caaggagcag gtgctcgcct gcgccgagcc
     1081 gctctgggaa gacttgggga taggcccgga ggaattcctc gccatcggga accagccgaa
     1141 cgacgacctc ttccacatga ccaccaccgc gctccggctc tcctcgagag tgaacggcgt
     1201 ggcgcgccgc catggcgagg tgtcccgcga gctgtggcac cagctctggc cccagctcaa
     1261 ggtcgaggac gtccccatcg ggcatgtgac caacggggtg cacctcgcga cctggatgtc
     1321 gagccggatg ttcc
//
LOCUS       DATIFF010000468         2734 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_215762, whole genome shotgun sequence.
ACCESSION   DATIFF010000468 DATIFF010000000
VERSION     DATIFF010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2734
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_215762"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..1564)
                     /gene="ccoN"
                     /locus_tag="VLD58_06970"
     CDS             complement(104..1564)
                     /gene="ccoN"
                     /locus_tag="VLD58_06970"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HSB54079.1"
                     /translation="MSTMPTGHESVAAAAIRPDESGYDDDIVKMFFAATVTWAAVGML
                     VGLWIALELAWWPANLGLPYTTFGRLRPLHTNAVIFAFGGNICFTGIYYSMQRLLRTR
                     MWSDAISRFHFWGWQAIIVAAAITLPLGMTESKEYAELIWPIDVAIVVVWVAFAVNFF
                     GTIAVRKVAHLYVAIWFYMSFVITIPVLHIVNSLAIPATLFRSYPVYAGLTDALVQWW
                     YGHNAVGFFLTTPFLGLMYYFLPRAAERPVYSYRLSIVHFWALVFLYIWAGPHHLLYS
                     ALPEWAQTLGMVFSIMLIAPSWGGMLNGLLTLRGAWDRVRTDPVLKFMVVAVSFYGMS
                     TFEGPMMSIRAVNSLSHFTSWTIGHVHSGALGWVGMVSFGILYWLFPRVWKRPLAYPS
                     WATTHFWLATIGIVLYTVSMWAAGLTEGLEWRALDTAGQLKYPNFVDIVHQLNPFYWL
                     RVVGGGMYLIGVIMMAWNFIRSASAKAVSAEATAAA"
     gene            1581..2267
                     /locus_tag="VLD58_06975"
     CDS             1581..2267
                     /locus_tag="VLD58_06975"
                     /inference="COORDINATES: protein motif:HMM:NF024778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HSB54080.1"
                     /translation="MSPSGNGSLAAVLLGAFLTGLAGSPHCLVMCGPFAAACGRHPAG
                     LAAWHVGRLVSYAALGAAAGLLGAAIPGPPWLGAAVGAALLLWFAAALAGFVPEPRVV
                     LPGFARAGRLLEEGRGPLAQFAFGIANGFLPCGLVYSALALPVAIGHAPGGALAMLAF
                     GAGTVPALSIAAAGLQRVTGRSLTARRWLAAAVLAAGLWSIAARAGLIEYTHAPRPGS
                     PPGHSHSPLP"
     gene            complement(2344..>2734)
                     /locus_tag="VLD58_06980"
     CDS             complement(2344..>2734)
                     /locus_tag="VLD58_06980"
                     /inference="COORDINATES: protein motif:HMM:TIGR01494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HSB54081.1"
                     /translation="PEQKVAAVQRLMKGGERVLMVGDGTNDAPALSSATVGIALASGG
                     GGISAEAADAVILADDPTRITEAMTISRRTMRIARQSIWVGLGLSSVAMGFAAAGMIP
                     PTIGALLQEAVDVAVILNALRASAAPR"
BASE COUNT          420 a          974 c          925 g          415 t
ORIGIN      
        1 gatcatgatc gcgatcgtcg tcgcgaccgc gaagatcgcc ccgcttttct ccaggacccg
       61 gcggtggaag gggtcccgct ccgtgcccgc catcccgccc tcctcaggcc gccgcggtgg
      121 cctcggcgga aaccgccttg gcgctcgcgg agcggatgaa attccatgcc atcatgatga
      181 cgccgatcag gtacatcccg ccgcccacga cccggagcca gtagaacggg ttgagctggt
      241 gcacgatgtc cacgaagttc gggtacttga gctggccggc cgtgtcgagc gcccgccact
      301 ccagcccctc ggtcaatccc gccgcccaca tggacacggt gtagaggacg atcccgatcg
      361 tggcgagcca gaagtgggtc gtcgcccagg acggatacgc cagcgggcgc ttccagaccc
      421 gggggaagag ccagtacagg atcccgaagg agaccatgcc cacccagccg agcgcgccgc
      481 tgtggacgtg gccgatggtc cagctggtga agtgggaaag cgagttcacc gcccggatcg
      541 acatcatcgg cccttcgaac gtgctcatgc cgtagaagct cacggcgacc accatgaact
      601 tgagcaccgg gtcggtccgc acccgatccc aggcgccgcg cagggtgagc aggccgttca
      661 gcatgccgcc ccacgagggc gcgatcagca tgatgctgaa caccatgccc agggtctggg
      721 cccactcggg cagggcggag tagagcaggt gatgcggccc ggcccagata tagaggaaca
      781 ccagcgccca gaagtgcacg atcgagaggc ggtagctgta gaccgggcgc tccgccgcgc
      841 ggggcaggaa gtagtacatg agccccagga acggggtggt gaggaagaag cccaccgcgt
      901 tgtgaccgta ccaccactgc accagcgcgt cggtcagtcc ggcgtacaca gggtacgacc
      961 ggaagagggt cgcggggatc gcgaggctgt tcacgatgtg gagcacgggg atcgtgatga
     1021 cgaacgacat gtagaaccag atcgccacgt acaggtgcgc caccttccgc accgcgatcg
     1081 tgccgaagaa gttcacggcg aaggcgaccc acaccaccac gatcgcgacg tcgatcggcc
     1141 agatcagctc ggcgtactcc ttcgactcgg tcatcccgag cggcagcgtg atcgccgcgg
     1201 cgacgatgat cgcctgccag ccccagaagt ggaaccggga gatcgcgtcg ctccacatcc
     1261 gggtgcggag cagccgctgc atggagtagt agatgccggt gaagcagatg ttgccgccga
     1321 acgcgaagat caccgcgttc gtgtgcagcg gccggagccg tccgaaggtg gtgtacggga
     1381 gaccgaggtt ggccggccac cacgccagct ccagcgcgat ccagagaccg accagcatcc
     1441 cgaccgccgc ccaggtgacg gtggcggcga agaacatctt gacaatgtcg tcatcgtagc
     1501 ccgattcatc cggtcggatc gcggcggccg ctaccgactc atgccccgtt ggcatcgtgc
     1561 tcatggctcc tcagttgctg ttgtccccgt cgggaaacgg atcgctcgcg gccgtgctgc
     1621 ttggcgcctt cctcaccggc ctggcgggga gcccgcactg tctcgtcatg tgcggtccct
     1681 tcgccgccgc ctgcggccgg caccctgccg gactcgcggc ctggcacgtc ggccgcctcg
     1741 tgtcctacgc cgcgctcggg gcggcggccg gcctgcttgg cgccgcgatt ccgggcccgc
     1801 cgtggctggg cgcggccgtc ggcgccgccc tgctgctctg gtttgccgcg gccctggccg
     1861 gcttcgtgcc cgagccccgg gtggtattgc ccggctttgc ccgcgccggc cggctgctcg
     1921 aggagggccg cgggcccctc gcccaattcg ccttcggcat cgccaacggc ttcctgccct
     1981 gcggcctggt ctactccgcc ctcgccctgc ccgtagccat aggacatgcg cccggcggcg
     2041 cgctcgccat gctcgccttc ggcgcgggca ccgtgcccgc cctgtccatc gccgccgcgg
     2101 gcctccagcg ggtcaccggc cggagcctca cggcgcggcg ctggctcgcg gccgccgtgc
     2161 tcgccgcggg gctctggtcc attgccgcgc gggccgggct gattgaatac acacacgccc
     2221 cccggcccgg ctctccgccc ggccattcgc actccccgct accgtaacag ggccgcgtgc
     2281 gggtcaggac aagactaggg gatgttgcgt gaaggcagcc gctagaatgt ctgaagattt
     2341 ccttcagcgc ggggccgcgc ttgcccggag agcgttgagg atcacggcga cgtccaccgc
     2401 ttcctggagc agggcgccga tcgtgggggg aatcatgccc gccgcggcga atcccatggc
     2461 gacgctgctg agccccaggc cgacccagat gctctggcgg gcgatgcgca tggtccgccg
     2521 gctgatcgtc atggcttcgg tgatacgggt ggggtcgtcg gcgaggatca cggcgtccgc
     2581 cgcctccgcg ctgatcccgc cgccccccga ggccagcgcg atcccgaccg tcgcgctgct
     2641 cagcgcgggg gcgtcgttgg tgccgtcgcc caccatgagc acccgctctc cgcccttcat
     2701 cagccgctgg acggcggcca ccttctgctc gggc
//
LOCUS       DATIFF010000469         2752 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1445813, whole genome shotgun sequence.
ACCESSION   DATIFF010000469 DATIFF010000000
VERSION     DATIFF010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2752
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1445813"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..748)
                     /locus_tag="VLD58_06985"
     CDS             complement(<1..748)
                     /locus_tag="VLD58_06985"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB54082.1"
                     /translation="MNDFPAPLQEALADRYRIERPLGAGGMATVYLAEDLKHDRRVAL
                     KVLKPELAAVLGAERFVVEIKTTASLQHPHILPLFDSGTAHGFLYYVMPYVEGETLRD
                     KLNRETQLSVEEAVRIASEVADALDYAHRHGVIHRDIKPENILLHDGRPMVADFGIAL
                     AVSAAAGGRMTETGLSLGTPHYMSPEQATAEKEITARSDIYSLGCVLYEMLTGAPPHV
                     GASAQQIIMKIVTEEAQPVTRVRKNVPPNVT"
     gene            1353..>2752
                     /locus_tag="VLD58_06990"
     CDS             1353..>2752
                     /locus_tag="VLD58_06990"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HSB54083.1"
                     /translation="MLALLLLLQTVTAGRAAVASATLATGPGAGVEGRGSPTADVPRV
                     EAAEVRIDGVLDEPVWAQATRLTGFWQYQPVDGRPAEESTEVLVWYAPDAIYFGIIAH
                     DKVPAAIRATVADRDNLDNDDHVVLEIDTFHDRRRAFSFAVNPLGAQSDGVRSEGTGQ
                     VSGLIPGSTDLNPDFIWESKGRITDQGYQVEIRIPFKSLRYPSTEPQSWGFNVTRVVK
                     RTGYTDTWTDVRRANASFLGQEGALGRLHDLKRGVLIEAQPFVTATANGVRNDATGTF
                     DRESVNPDAGLNLRLGFTSFALDATANPDFSQVETDAGQVTLNQRFALFYPEKRPFFL
                     EGIELFGTPQTLVYTRRIGDPKGGVKLTGKFGQLGVAHLTAVDQTDTGNAWFNITRLR
                     RDFGRNSIAGLTFANRDQGDSHNRVLAADFRYVWSLYYLQFQYGASVTSDAAGSRTAP
                     IWLAEYDRTGRSWGFN"
BASE COUNT          435 a          981 c          905 g          431 t
ORIGIN      
        1 ccgtcacatt gggcggcacg ttcttccgaa cccgggtgac cggctgggcc tcctcggtca
       61 cgatcttcat gatgatctgc tgcgccgagg ccccgacgtg cggcggggcc ccagtcagca
      121 tctcgtagag cacgcagccc agcgagtaga tgtcggagcg ggccgtaatc tccttctccg
      181 ccgtcgcctg ctccgggctc atgtagtgcg gggtgccgag cgagagcccc gtctcggtca
      241 tccggccgcc ggcggcggcg gagaccgcca gcgcgatgcc gaagtccgcc accatcggcc
      301 ggccgtcatg cagcaggatg ttctccggct tgatgtcccg gtggatgacc ccatgccggt
      361 gcgcgtagtc cagcgcgtcg gccacctcgg acgcgatccg caccgcctcc tcgacgctca
      421 gctgggtctc gcggttgagc ttgtcccgca gggtctcgcc ctcgacgtag ggcatcacgt
      481 agtacaggaa cccgtgcgcg gtgccggagt cgaagagggg gaggatgtgg gggtgctgga
      541 ggctcgccgt ggtcttgatc tcgaccacga accgctcggc gccgagcacc gcggcgagct
      601 cgggcttcag gaccttgagc gcgaccctgc ggtcgtgctt gagatcctcg gcgaggtaga
      661 ccgtcgccat gccgccggcg ccaagggggc gctcgatgcg gtaccgatca gcgagggctt
      721 cctgcagcgg ggcaggaaag tcgttcacat ccgcgagggt aggggtgtcc aaacatgacc
      781 cgaggagggg gctctggcta gtcgctccgt tctggagatc cgcgtgtcgg gcggctactt
      841 ccccgccacc aggcgctcga agcgcgggtt ccccttgggc ggcgcgaacg tggggtcaac
      901 gtttgtgcca aagcgcggaa gagctgaacc gcgatcaatc gcgtctgtcg cctccctgct
      961 agtccctcgc taatccagag cgcacgaggc cgttgagcgt cccagagcat gttgccccga
     1021 ggtcggatga ctcgggccgc gtcgtagccg tctgttcaca cggggaacgg ctgccgcggc
     1081 taccaaccgg gacaggcccg atgccgaggt tcctcatcga acgtgagatc ccgagcgcag
     1141 ccgggcccac tgctgatggc ttgagctcat ccggaagcac gcacgcctgg gcggcggccg
     1201 agcggcgagg cgtcctgacc tacgattcgc aactgggagt cgggccggaa acccggacgc
     1261 cgaccgggac gtagatttca tatccgttcg gtcgccgcgt cggggctccg ccgccgcccc
     1321 gctccgcctc cgtcaaccca acacggtcgc ctgtgctcgc actgctgctg cttctccaaa
     1381 ccgtcactgc cggtcgcgcc gcggtcgcct ccgccactct cgccacgggg ccgggcgccg
     1441 gcgtcgaggg gcggggctcg cccaccgccg acgtcccgcg ggtagaggcc gcggaggtcc
     1501 ggatcgacgg cgtgctcgac gagcccgtct gggcccaggc cacccggctc acgggcttct
     1561 ggcaatatca gcccgtcgat ggccggccgg ccgaggagag cacagaggtc ctcgtctggt
     1621 acgcgccgga cgcgatctac ttcggcatca tcgcccacga caaggtgccc gccgctatcc
     1681 gtgccaccgt ggccgaccgc gacaacctcg acaacgacga tcacgtcgtg ctggagatcg
     1741 acaccttcca cgaccgccgc cgtgccttct cgttcgccgt gaacccgctc ggcgcccaga
     1801 gcgacggtgt gcggagcgag ggcaccggcc aggtgtcggg tctcatcccc ggcagtaccg
     1861 acctcaaccc tgacttcatc tgggagtcca agggccggat caccgaccag gggtaccagg
     1921 tcgagatccg gattccgttc aagagcctcc gctacccatc caccgagccg cagagctggg
     1981 gcttcaacgt gacccgcgtg gtcaagcgca ccggctacac ggatacctgg accgatgtgc
     2041 gccgcgccaa cgccagcttc ctcggccagg agggcgcgct cggcaggctg cacgatctca
     2101 agcgcggcgt gctgatcgag gcgcagccat tcgtaaccgc caccgccaac ggcgtccgga
     2161 acgatgccac cggcacgttc gaccgcgaga gcgtcaaccc cgacgccggt ctgaaccttc
     2221 ggctcggctt caccagcttt gcactcgacg cgaccgcaaa tcccgacttc agccaggtgg
     2281 agaccgacgc cgggcaggtg accctgaacc agcggttcgc cctcttctat cctgagaagc
     2341 ggccgttctt cctcgagggg atcgagttgt tcggcacccc ccagacgctg gtctacaccc
     2401 gccggatcgg ggatcccaag ggcggggtca agctcaccgg gaagttcggg cagctcgggg
     2461 tcgcgcacct cacggcggtg gaccagaccg acacgggcaa cgcctggttc aacatcaccc
     2521 ggctccgccg tgacttcggc cggaactcga ttgccggcct gaccttcgcc aaccgcgacc
     2581 agggcgacag ccacaaccgc gtgctcgccg ccgacttccg ctacgtctgg agcctgtact
     2641 acctccagtt ccagtacggc gcctcggtca ccagcgacgc ggcgggcagc cgcaccgccc
     2701 cgatctggct ggcggaatac gaccggaccg gacgctcgtg gggcttcaac ta
//
LOCUS       DATIFF010000470         2610 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1907872, whole genome shotgun sequence.
ACCESSION   DATIFF010000470 DATIFF010000000
VERSION     DATIFF010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2610)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2610)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2610
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1907872"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(123..635)
                     /gene="lepB"
                     /locus_tag="VLD58_06995"
     CDS             complement(123..635)
                     /gene="lepB"
                     /locus_tag="VLD58_06995"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: protein motif:HMM:NF021981.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HSB54084.1"
                     /translation="MVALATLALGLVWTRGGTRWPAIYYMTGPSMAPAVGAGAWFLAA
                     IPGGPVHRGDLVLVELTLEDTSYDVLRRVVGLPGDTLTMLAGRLSVNGGPAPWPFRVL
                     EDRAERPLDGPVAGTIYRWGPVVVGPDSLFLLSDTRDMIGWPDSRFLGALPRPSVVGK
                     FRRLLWRGPP"
     gene            1074..2273
                     /locus_tag="VLD58_07000"
     CDS             1074..2273
                     /locus_tag="VLD58_07000"
                     /inference="COORDINATES: protein motif:HMM:TIGR02913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54085.1"
                     /translation="MRHLTWTVLIVAIAGCRAETDLTQPLERQAARLSGVQYRVVKLP
                     TLGGSASRGNGINNEGWVAGFSDLADGRRHAALWRNDSIFDLGTLGGPNSNSPWPGVS
                     NSGLIVGNADTPELDPLNEDWSCEAFMPASGHICRGFVWENGALSDLPTLGGNQGFAT
                     GVNSRGQVVGWAETAVHDPTCNSPQVLQFRAVMWEPRFGTRKELRPLPGDSASAATAI
                     NERGQVVGISGDCDVAVGRFSARHSVLWEGDSVIEIRNLGGVTWHTPMAINQEGDVVG
                     FSNPPGPGDPDGDFIAHAFLWLRNRPDTIFDLHQSSQDAFSEALGINARRQVVGVTFG
                     GSRGTRAFLWQDGVMTDLNDLVAPSSDVLVSAQDINDTGQITGRVRDGSTGKVVAFIA
                     TPIADVP"
BASE COUNT          429 a          926 c          889 g          366 t
ORIGIN      
        1 ggcgagcagc gcctggtcgt tggcaacggg atcgaacgcc gtgtctatcc cgagaagccg
       61 aagccagcgg gccagcccgc ccagcatccc gtcggcgagg aagcgcggcc cggacgcttc
      121 ggtcacggcg ggcctcgcca cagcaaccgc cgaaacttcc cgaccaccga aggccggggc
      181 agcgcaccga gaaaccggga gtcgggccaa ccgatcatgt cccgcgtgtc gctcaggagg
      241 aacagcgagt cgggaccgac gacgactggg ccccaacggt atatcgtgcc ggccaccggc
      301 ccgtccagcg ggcgctccgc ccggtcctcg agcacccgga agggccatgg cgccggtccg
      361 ccgttcacgc tgagcctgcc cgcaagcatc gtcaacgtat cgcccggcaa tccgaccact
      421 cggcgcagca cgtcgtacga cgtgtcctca agcgtgagct ccaccagcac caggtcgcca
      481 cgatggaccg gaccgcccgg gatcgcggcc aggaaccacg cccctgcccc aaccgccggg
      541 gccatgctgg gaccggtcat atagtagatc gccggccagc gggtgccacc gcgagtccag
      601 accagcccga gcgccagggt agccagcgcc accatgaccg cgatagcccg cggcaggcga
      661 tggatcgagt ctgacgtctt gcctcacccg gaggatgtcc ggcctcaggc cggtttcggt
      721 tctggtcgag cgccttagcc ggaacggtca ccggtaatct ggagcggcgg ggctgaagca
      781 gtcatgaagg acagccaccg cgacccccgg cctccccttt tgtgaggaac ggcgggtatg
      841 cgcccgggca gcggcgccgg gagggacaac tcggccgcgg cgcggcccgt cggaggtcgg
      901 acggggcacg agctcgcgcg gggaattcgg agtccggatg cggcgagcgc cgttgcggcg
      961 gatttcaggt ccgaatccgg cgcgcgcctc cgttgcgcgc gccttaaggt gcgggcagcc
     1021 ggagggcggg catgggcagc gcgctcccgc cgtctctgac accggaggat accatgcgac
     1081 acctcacctg gacggtcctg atcgttgcca tcgccggctg ccgcgccgaa accgacttga
     1141 cccagccgct cgagcggcag gccgcacgcc tgtcgggcgt gcagtaccgg gtcgtcaagc
     1201 tcccgacgct ggggggatcg gcgagccggg gaaacgggat caacaacgaa gggtgggtgg
     1261 cgggcttctc cgacctggcg gacgggcgcc gccatgccgc cctgtggcgg aacgattcca
     1321 tcttcgacct cggcacgctc ggcggaccga acagcaactc gccatggccg ggcgtgagca
     1381 acagcggcct gatcgtcggc aacgccgata ctcccgagct cgatcccctg aacgaggact
     1441 ggagctgcga ggcgttcatg cccgcgagcg gtcacatctg tcgcggcttc gtctgggaaa
     1501 acggggccct gtccgacttg ccgacgctgg gcggcaacca gggcttcgcc accggcgtca
     1561 acagccgcgg gcaggtggtc gggtgggccg agaccgccgt ccatgatccc acctgcaact
     1621 cgccccaggt gctccagttc cgggcggtca tgtgggagcc gaggttcggc acccggaagg
     1681 agctccggcc gttgcccggc gattcggcct cggcggccac agccatcaac gaacgcggac
     1741 aggtcgtcgg catctcggga gactgcgacg tagccgtggg gcgtttcagc gcccgccact
     1801 ccgtcctctg ggaaggcgac tcggtaatcg agatccgcaa cctcggaggc gtgacctggc
     1861 acacccccat ggccatcaac caggagggag acgttgtcgg gttctccaac ccacccgggc
     1921 ccggcgatcc ggacggcgac ttcattgccc acgccttcct gtggctccgg aacaggcctg
     1981 acacgatctt cgatctgcac cagtcttccc aggacgcttt cagcgaggcc ctcggcatca
     2041 acgcacggcg ccaggtggtc ggcgtgacct ttggcggctc ccgtggcacc cgcgccttcc
     2101 tctggcagga cggggtcatg acggacctga acgacctcgt ggctccgtca tccgacgtcc
     2161 tggtctccgc acaggatatc aacgacaccg ggcagatcac cggcagggtg cgagatggga
     2221 gcaccggcaa ggtggttgcc ttcatcgcga ctccgatagc cgacgtccct tagagcggat
     2281 tcggcgcccg gcgcacggca gggcgcggaa gcgccgacag ctccttcacc tgacctcgct
     2341 ccggacgggg ggcggacgcg ggagaggaat gtcggcaccc gcgccctgcc cccggttgcg
     2401 gattcctcac ctggcgctaa gctgggaggg cctggcccca cgcgctgccc gaggattcgc
     2461 gatccgcatg gaactccccg cgtttcgata tcaccccgat ccgctcgcga gcggatccgt
     2521 tgcggcctcc ccggcgaact gccgctgctg cggcgaggcg cgcgggcaca tctaccaggg
     2581 tcctgtgtac gcggagaccg acctcgacca
//
LOCUS       DATIFF010000471         4590 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_676643, whole genome shotgun sequence.
ACCESSION   DATIFF010000471 DATIFF010000000
VERSION     DATIFF010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4590
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_676643"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1199)
                     /locus_tag="VLD58_07005"
     CDS             complement(<1..1199)
                     /locus_tag="VLD58_07005"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB54086.1"
                     /translation="MQSLIATLRSLRRAPGYAIASLLTLGLSLGAVTAIFSVVHSVLL
                     APLPYRAPERLFVFAEQSTQVQGRLPAYLTFLDYRANARSFEGMGYILGASEALRTRD
                     GIVQMVNARVSDGFFGVLGATPMLGRVFGPEEERAGAPPVAVISYAFWRSQFAGDPAV
                     IGRTLDTGSGSYTVIGVLPAGASYPGWAQVYTPLASGPELPAMSRRDVHVDGGMLARL
                     RPEVDSATAARELEQLGQRFAESYPAENAGFRGVITSMQTAITGGGTGTPLLLLLAAT
                     SLLLVMACVNVASLGLARVAERTREMALRTALGAARGRLVGQLLMESVLLALGGAVLG
                     LMLASWLVHLLTASNGTNLVAAGLAGAVPRMEEIRLDTPVFAAALLLTLVAGIAAGLL
                     PALAGSRP"
     gene            complement(1223..3664)
                     /locus_tag="VLD58_07010"
     CDS             complement(1223..3664)
                     /locus_tag="VLD58_07010"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADOP family duplicated permease"
                     /protein_id="HSB54087.1"
                     /translation="MTGFFDDLRLALRTLWRSPGFALTAALTLALGVGATTTLVSALD
                     SMLFRPPVAVKEPGAIVRQYYHAASPTFGEYTNSGTSYVDFTSLTRARSFAEVAAFYG
                     VNASMGRGSDARPVYLVAVTGNYFGMLGTSALLGRLILPEDDQEGNGTLALVLSERIW
                     RTRYGSDPAILGKTLPIDNSVYTIVGVAPKGFDGGNFDTSDGWVALAPIGAQQIGKGF
                     RTAKEWYWIQTIARLAPGVTRARAAAEATGLVRAGRDSASMQGFKEVWLGPVQEARGP
                     DFKESARLVYWLAGVSLIVLLIACANVANLQLVRGLGRGRELAIRKALGGGRGRIARQ
                     LFLEGVWLALLAGGAGILVCQWGGDLLRRFVLPAGMSENFGIDLRVWGIAAAASALAA
                     LGSSLLPALRVVQGDLTPVLKDGARNTGFRSSRLRAALVVLQVALSILLVVGAGLFVQ
                     SLHNVRALDIGYDRDQVLMVNADLQSAGFNGVAIGTAFSTLAEAARRYPGVESVTLTF
                     GEPFGWSMSRGLKVAGMDSLPRFSSGGPYVQSVTADFFKTLGLGLRQGRSFTDADRRA
                     HPAVAVLGSTMAKRFFGEGKALGQCLLFDGSKDCTEVIGVVEDGVRSSPMEEPQAIYY
                     IPLPPADSSTNHLTLFVRTRGEASASVAGLRSALQTAVPNLPYVGVRSLQEVIAPRYQ
                     SWRLGATLFGLFASVALVLASLGIYSVLAYAVRGRTRELGIRLALGALPASLLALVVR
                     DGLRLTLVGVVLGIVAALVAGRALGSLVYGVSPHDVPTMILAGGTVLLVALAASLLPA
                     RRAAKVDPMQSLRSD"
     gene            3694..4335
                     /locus_tag="VLD58_07015"
     CDS             3694..4335
                     /locus_tag="VLD58_07015"
                     /inference="COORDINATES: protein motif:HMM:NF023802.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HSB54088.1"
                     /translation="MGGRSKQLSVPYFTQPTDNTCQSTVLKMFATYLEQSVLRVSGGA
                     ENLRPPDIYQTINKDPKRPNQKFTNAHANMKWWLEQRFPTLNFQYFTTALDYEAFDKI
                     VGFIDSGFPVLVAVSHANVEGHIVLVIGYEGYEANQCSLDFKLIVHDPYGAFDPSLKS
                     KVWGKQRFDQGMCLQTGGEIGPGTAVKLDPMAASRQRKGDKYKGTFYLISASR"
     gene            complement(4347..>4590)
                     /locus_tag="VLD58_07020"
     CDS             complement(4347..>4590)
                     /locus_tag="VLD58_07020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54089.1"
                     /translation="IVRLVLGEGVKLAGIGIAIGLGAALLLTRLASSLLFGVSPTDPV
                     VLVLVLGSLAVVTLLASWIPARRAARVAPVVALKSE"
BASE COUNT          805 a         1664 c         1504 g          617 t
ORIGIN      
        1 gggcggctac ccgccagcgc gggcagcaat cccgcggcga tccccgccac cagcgtgagg
       61 agcagcgccg ccgcaaagac cggtgtgtcg agccggatct cctccattct cggcaccgct
      121 cccgcgagac ccgcggccac caggttggtg ccattcgagg ctgtgaggag gtgcaccagc
      181 cacgaggcga gcatcaggcc gagtaccgcg ccaccgagtg cgagcagcac cgactccatg
      241 aggagctgcc ccaccagccg gccgcgcgcc gcacccagcg ccgtccggag cgccatctcc
      301 ctggtccgct cggccacgcg cgccagtccg aggctcgcca cgttcacgca cgccatgacg
      361 agcagcagcg acgttgccgc aagcaagagc aggagcggcg tgccggtgcc cccgccggtg
      421 atggccgtct gcatcgaggt gatgacgccg cggaagcccg cgttctccgc cgggtagctc
      481 tcggcgaagc gctggcccag ctgctccagc tcccgcgcgg cggtggctga atccacctcg
      541 ggccgaaggc gcgccagcat tccgccgtcg acatggacat cccgccggct catcgcgggc
      601 agctccggcc ccgacgcgag cggggtgtag acctgggccc accccggata ggaggcgccc
      661 gcgggcagca caccgatgac ggtgtagctc cccgaaccgg tatcgagcgt ccggccgatc
      721 accgcgggat cgcccgcaaa ctgactccgc cagaaggcgt agctgatcac cgcaaccggc
      781 ggcgcgccag cccgctcctc ctccgggccg aacacccggc ccagcatcgg cgtcgcgccc
      841 agcaccccga agaatccgtc cgacacccgg gcgttcacca tctgcacgat gccgtcccgg
      901 gtccgcagcg cctcggaagc gccgaggatg tagcccatgc cctcgaagct cctggcgttg
      961 gcccggtagt cgaggaaggt gagataggcg ggaagccgtc cctgcacctg ggtgctctgc
     1021 tccgcgaaga cgaagagccg ctccggtgcg cggtatggca atggcgccag cagcacgctg
     1081 tgcaccaccg agaagatcgc cgtcaccgcc ccgaggctga gaccgagcgt caggagcgag
     1141 gcgatggcgt agccgggggc gcggcgcagg ctccgcaggg ttgcaatgag actctgcatc
     1201 agcatttcgt tcctcggttc cctcagtcgc tccgcaggct ctgcatcgga tccaccttcg
     1261 ccgctcttcg cgccgggagc aggctcgcgg ccagcgccac cagcagcacc gtgcccccgg
     1321 ccaggatcat cgtcggtaca tcgtgcggcg agacgccgta gaccagcgac cccagcgccc
     1381 ggccggccac gagcgccgcc acgatcccga gcaccacgcc gacgagtgtg agcctgagtc
     1441 catcacgcac caccagcgcg agcagcgagg cgggcagcgc cccgagggcc agcctgatgc
     1501 cgagttccct ggtgcggccc cgtaccgcgt aggccagcac gctgtagatg ccgagcgagg
     1561 cgagcaccag cgctacgctg gcgaacaacc cgaagagcgt ggcgccgaga cgccaggact
     1621 ggtagcgtgg cgcgatcacc tcctggagtg agcggacccc cacgtacggc aggttgggca
     1681 ccgcggtctg gagtgcgctg cggagtccgg cgaccgatgc ggaagcctca ccccgggtcc
     1741 ggacgaacaa cgtgagatgg ttggtgctgc tgtcagccgg cggcaacggg atgtagtaga
     1801 tcgcctgcgg ctcctccatc gggctggagc ggactccgtc ctccactacc ccgataacct
     1861 cggtgcagtc cttggagcca tcgaagagca ggcattgccc cagggccttt ccctcgccga
     1921 agaagcgttt cgccatggtg gacccgagga ccgccaccgc ggggtgcgcc cgccggtcgg
     1981 catcggtgaa actgcgtccc tggcggaggc caagccccag ggtcttgaag aagtcggctg
     2041 tcaccgactg gacgtacggt ccaccgctcg agaaccgtgg cagggagtcc atccccgcga
     2101 ccttgagccc gcgtgacatg ctccagccga acggctcgcc gaaggtgagg gtcactgact
     2161 ccacgcccgg ataacggcgc gcagcctcgg ccagggttga aaaggccgtg ccgatggcga
     2221 cgccgttgaa gccggcactc tgcaggtcgg cgttgaccat gaggacctgg tcccggtcgt
     2281 acccgatgtc gagtgccctg acgttgtgga ggctctgcac gaagagtccg gcgccgacca
     2341 ccagcaggat cgagagcgcc acctgaagga cgacgagcgc ggccctcagc cgggaactcc
     2401 ggaagccggt gttgcgggcc ccatccttta gcaccggagt gagatcaccc tgcaccaccc
     2461 ggagcgcggg gaggagactc gagccgagcg ccgcgagcgc gctggccgcc gcggcgatcc
     2521 cccagacccg caggtcgatg ccgaagttct cgctcatgcc ggccggcagc acgaatcgcc
     2581 gaagcagatc cccgccccac tggcagacga ggatcccggc ccctccagcg agcagcgcca
     2641 gccagacccc ttcgagaaac agttgccgcg cgatccgtcc ccggcctccg ccgagcgcct
     2701 tgcggatcgc gagttcgcgg ccgcggccca gcccccggac cagctggagg ttggcgacgt
     2761 tcgcgcaggc gatgagcagg acgatcagcg acacgccggc gagccagtac accagccggg
     2821 cgctttcctt gaaatccggc ccgcgcgcct cctggaccgg cccgagccac acttccttga
     2881 atccctgcat gctggccgag tcccgcccgg cccggaccag cccggtggcc tcggcggccg
     2941 cccgggcccg cgtcacccca ggagccagcc gagcgatggt ctggatccag taccactcct
     3001 tcgcggtacg gaaccccttg ccgatctgct gtgccccgat gggcgcgagc gccacccagc
     3061 cgtcggaggt gtcgaagttc ccgccgtcga atcccttcgg cgccacaccc acgatcgtat
     3121 agaccgagtt gtcgatcggc agggtctttc ccaggatcgc ggggtcgctg ccgtagcggg
     3181 tgcgccagat ccgctcactc agcaccaggg cgagcgtacc gttgccctcc tggtcgtcct
     3241 ccggcagtat caggcggccg agcaaggcgc tggtgccgag catgccgaag tagttgccgg
     3301 tcaccgccac caggtacacc ggccgggcat cgctgccccg gcccatcgac gcattgaccc
     3361 cgtagaacgc cgccacctcc gcgaagctcc gggcccgggt gagcgaggtg aagtcgacgt
     3421 acgaggtgcc ggagttggtg tactccccga acgtcgggct ggcggcatgg tagtattgcc
     3481 ggacgatggc ccccggttcc ttgacggcga ccggcggccg gaacagcatg gagtcgagcg
     3541 cgctcaccag cgtggtcgtc gcgccgacgc ccagagccag ggtgagggcc gcggtcaggg
     3601 caaagccggg actccgccag agggtgcgaa gcgccaggcg aagatcatcg aagaacccgg
     3661 tcatgacggg actccgggac aggagacgag gctatgggcg gacgatcgaa acagctgtcg
     3721 gttccgtact tcacgcagcc gaccgacaac acctgccagt cgacggtcct caagatgttc
     3781 gccacctatc ttgaacagtc ggtgctccgc gtgagcggcg gggctgaaaa cctccggcca
     3841 ccggacatct accagaccat caacaaggat cccaagcgcc ccaaccagaa gttcaccaat
     3901 gcccacgcca acatgaaatg gtggctggag cagcgctttc ccaccctcaa cttccagtac
     3961 ttcaccaccg cgctcgacta cgaggcgttc gacaagatcg tcggcttcat cgattccggc
     4021 ttcccggtgc tggtcgccgt gagtcacgcc aatgtcgagg gacacatcgt gctggtgatc
     4081 gggtacgagg gatacgaggc caaccagtgc tcgctcgact tcaagttgat cgtgcatgat
     4141 ccctacggcg ccttcgatcc ctcgctcaag tccaaggtct ggggcaagca gcggttcgac
     4201 cagggcatgt gcctgcagac ggggggcgag atcgggccgg gcaccgcggt gaagctcgac
     4261 cccatggccg cgagccggca gcggaaggga gacaagtaca agggcacctt ctacctcatc
     4321 tcggcctccc gctagcacgg cgcggctcat tccgacttga gcgccaccac cggcgccacc
     4381 cgggccgccc gccgggccgg gatccagctg gcgaggagcg tcaccaccgc gagactcccc
     4441 agcaccagca ccagcaccac cggatcggtg ggcgacaccc cgaacaggag cgagctcgcc
     4501 agccgggtca gcaggagggc ggcgccgagc ccgatcgcga tcccgatgcc cgccagcttc
     4561 acgccttccc ccagcaccag ccgcacgatc
//
LOCUS       DATIFF010000472         1827 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_830143, whole genome shotgun sequence.
ACCESSION   DATIFF010000472 DATIFF010000000
VERSION     DATIFF010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_830143"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..592
                     /locus_tag="VLD58_07025"
     CDS             <1..592
                     /locus_tag="VLD58_07025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54090.1"
                     /translation="SQRLRGKKIGGNRIAAVSSAGFETVGMADRLQSDDYRLQMASLA
                     SESLVAIGEVLRQNRLDLLVEVRNPLDINPGSDDRVHARIVEILAQDPHVDAVVVGII
                     PLGYNTRTLPGANPYAFESGESFVKLLPPIAARSEKPVVAVVDAGTLFDPMVEALEEQ
                     GMAVFRSADQAVAALGRYIAGKLAAERIRLTGGGER"
     gene            complement(653..>1827)
                     /locus_tag="VLD58_07030"
     CDS             complement(653..>1827)
                     /locus_tag="VLD58_07030"
                     /inference="COORDINATES: protein motif:HMM:NF016083.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF401 family protein"
                     /protein_id="HSB54091.1"
                     /translation="KVALSINLIVSAFILAFLFQLPAGEILDGVRRTFLSLENLKLVA
                     ALELVLLFSAVLKENGAMNRAIAALGGVVRDARFTVAIIPAVIGLLPVVGGAMLSAPL
                     VAEASDELGLPPERRTFLNFWFRHVWEYTLPTFPAVFLTAGITGVPIPALVAAAAPLT
                     ISAIAAGVFFGFRGVRPPHSDGGAGSLPQAGRQFARFAWNLLPFFLVIGLTVGLDIHL
                     VYPLAVVTTGVVLSTRMPPGRLRRLARRHLSIDLAFLIWGIMLFKEILAATGAMADIA
                     ADLSAMGIPPPALVVLLPALIAFITGYTTAFVGLSFPVLVPFIEPGGMSAYYVMLGLA
                     SGIGAHMLSPMHACLAMTLQYYEAGMGKTYRLLFMPAAVVFLTGVCVFAAAAWLVG"
BASE COUNT          348 a          595 c          642 g          242 t
ORIGIN      
        1 gtcccagcgc ctgcgcggca aaaaaatcgg cggcaaccgc atcgccgcgg tcagctccgc
       61 cggattcgag acggtgggca tggccgaccg gcttcagtcc gacgactacc gcctgcagat
      121 ggcctccctc gcgtcggaat cgctcgtggc catcggcgaa gtgctgcgac agaaccggct
      181 ggacctgctg gtggaggtca gaaacccgct cgacatcaac ccggggtccg acgaccgagt
      241 gcacgcccgg atcgtggaga ttctcgcgca ggacccccac gtggatgcgg tggtcgtggg
      301 catcatcccg ctcgggtaca acacgcgcac gctgccgggg gcgaacccct acgcattcga
      361 gtccggggaa agtttcgtga agctgctgcc ccccatcgcc gcccgcagtg aaaaaccggt
      421 cgtcgcggtg gtggatgccg gcacgctctt cgacccgatg gtggaggccc tggaggagca
      481 gggcatggcc gtgttccggt ccgcggacca ggcggtggcc gcccttggac gttacattgc
      541 cggaaaactc gcggccgagc gcatccggtt gactgggggc ggggagcggt gacccgctgc
      601 gcaaccgggc cttcccggcg gcgaggtgtt ttccaacgtg tcgccggccc tctcagccga
      661 cgagccaggc agctgcggca aagacgcaca cccctgtcaa aaagaccacc gccgccggca
      721 tgaacagcaa tcggtaggtt ttccccatgc cggcctcata gtactgcagg gtcatcgcga
      781 ggcaggcgtg catgggggag agcatgtggg cgccgatgcc gctggcaagc cccagcatca
      841 cgtagtaggc gctcatcccg ccgggctcga tgaaaggaac cagcaccggg aagctcaacc
      901 ccacaaaggc ggtggtatat ccggtgatga aggcgatgag cgcgggcagc agcaccacca
      961 gcgccggagg ggggatcccc atcgccgaca ggtccgcggc gatgtcggcc atggcgcccg
     1021 ttgcggcgag gatttccttg aagagcatga tgccccagat caggaaggcg agatcgatcg
     1081 aaaggtgccg tcgtgcgagc cggcggagcc ggcccggcgg catgcgggtc gacaggacca
     1141 ctcccgtcgt caccacggcc aggggataga cgaggtggat gtccaggccg acggtaagcc
     1201 cgatcaccag gaagaacggc aggaggttcc aggcgaatcg ggcaaactgc ctccccgcct
     1261 gcggcagtga gccggcgccg ccgtcgctgt gcggcggccg gacgccccgg aaaccgaaga
     1321 acacgcccgc cgcgatggcg gagatcgtca acggggcggc cgccgccacc agcgcgggaa
     1381 tcgggacgcc ggtgatgccg gccgtcagga agacggcggg gaaggtgggc agggtgtact
     1441 cccacacgtg gcgaaaccag aagttcagaa acgtgcgccg ctccggcggc aggcccagct
     1501 cgtcggatgc ctcggccacc aggggggccg acagcatggc cccgcccacc acgggcagaa
     1561 gcccgatgac ggcggggatg atcgccaccg tgaagcgggc atcccgcacg acgccgccca
     1621 gggcggcgat cgcgcggttc atggcgccgt tttccttgag cacggcgctg aagagcagca
     1681 ccagctcgag ggcggccacc agcttcaggt tttcgaggct caaaaaggtg cgccgcacgc
     1741 cgtcgaggat ctcgccggcg ggcagctgga acaggaacgc aaggataaag gcgctcacga
     1801 tcaggttgat gctcaaagcc actttga
//
LOCUS       DATIFF010000473         1538 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2062215, whole genome shotgun sequence.
ACCESSION   DATIFF010000473 DATIFF010000000
VERSION     DATIFF010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2062215"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..518)
                     /locus_tag="VLD58_07035"
     CDS             complement(<1..518)
                     /locus_tag="VLD58_07035"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSB54092.1"
                     /translation="MKIEPFALERWMTRHEVNVRYDIAESGILPLRLTDLLGWMPAAE
                     REAALASLLELRLGYSEACGTEALRSAIAATYTGVSADQILVTTGAIEANYLLFNELL
                     DAGDHVIAPYPAYQQLYSVPRAIGCDVSLWPVGPETGYRYDVDRLERLLRPTTRLIVV
                     NTPHNPTGAMLSP"
     gene            676..>1538
                     /locus_tag="VLD58_07040"
     CDS             676..>1538
                     /locus_tag="VLD58_07040"
                     /inference="COORDINATES: protein motif:HMM:NF014826.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HSB54093.1"
                     /translation="MFTHLHVHTWFSMGQGASSPEALMAAAAARGFTALACTDTNGVY
                     GAVEFQRTAEEAGIHPILGVQLVSGGEECVALAMDERGWGAICRAVTVVHWGTAGRQV
                     GRSAGNAAPTSHPADLPSCRLADLLAHDRAGALILSASVPFLERIVALSGPDDVYAEL
                     RPGKARHAVLAAARRLGLPPVVTNAVMFAHAEDWARHRMLVAIGGNTTISTVEERVRR
                     YDGTTVDDSVPSYRPTVLPSSPDAWLKPAAELARHFPDVPDAIDRAGELAERCRYRIP
                     FGRIIPPRYAEA"
BASE COUNT          230 a          510 c          550 g          248 t
ORIGIN      
        1 ggggagagca tcgccccggt cggattgtgg ggcgtgttga ccacgatgag ccgggtagtc
       61 ggccggagca gccgctccag gcggtccacg tcgtagcggt atcccgtctc gggccccacc
      121 ggccagagcg agacatcgca gccgatcgcg cggggaacgc tgtagagctg ctggtacgcc
      181 ggatacgggg cgatgacgtg gtccccggca tcgagaagct cgttgaagag gaggtagttc
      241 gcctcgatcg cgccggtggt caccaggatc tggtcggccg agacgccggt gtaggtcgcc
      301 gcgatggcgc tccggagcgc ctccgtgccg caggcctccg aatagccgag ccggagctcg
      361 aggagtgacg cgagcgcggc ctcgcgttcc gcggccggca tccagccgag gagatccgtc
      421 aggcggagcg ggagaatccc gctctcggcg atgtcgtagc ggacgttgac ctcgtggcgg
      481 gtcatccacc gctcgagggc gaagggctcg atcttcatcg gttccggtcc gggggagcag
      541 gccggggaat ctcgccgcgc tggggggtcg gggcaacttg cccgcgacaa caccggattg
      601 accaatacaa gtctttgggc gtaaatgagt tacgtcaata cttgattttc ggtgtttatt
      661 cggtatttct agtgcgtgtt cacccacctt cacgtccaca cctggttctc gatgggccag
      721 ggcgccagca gccccgaggc gctgatggcg gccgccgcag cgcgggggtt caccgccctg
      781 gcctgcaccg acaccaacgg cgtgtacggc gcggtggagt tccagcgcac ggcggaggag
      841 gcggggatcc acccgatcct cggcgtccag cttgtctcgg gaggcgagga gtgcgtggca
      901 ctcgcaatgg acgagcgcgg ctggggcgcg atctgccggg cggtgacggt ggtgcactgg
      961 gggacggcag gacggcaggt cggcaggtcg gcaggtaatg cagcgccgac ctcccatcct
     1021 gccgacttgc catcttgccg acttgccgac ctcctcgccc acgaccgcgc cggcgcgctg
     1081 atcctctccg ccagcgtgcc gttcctcgag cggatcgtgg cgctgtcggg gccggacgat
     1141 gtgtacgccg agctccggcc cggcaaggcg cgccatgcgg tgctcgcggc ggcccggcgg
     1201 ctggggcttc cacccgtcgt caccaacgcc gtgatgttcg cgcacgcgga ggactgggcc
     1261 cggcaccgga tgctggtggc gatcgggggg aacacaacga tttcgaccgt cgaagagagg
     1321 gtacggcggt acgacggtac gacggtagac gattccgtac cgtcttaccg tcctaccgtc
     1381 ctgccgtctt cccccgacgc ctggctcaaa cccgccgccg agctggcccg ccactttccc
     1441 gacgtccccg acgccatcga ccgcgcaggg gagctggccg agcggtgccg ctaccgcatt
     1501 ccgttcggcc gcatcatccc gccccggtac gccgaagc
//
LOCUS       DATIFF010000474         4623 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_369338, whole genome shotgun sequence.
ACCESSION   DATIFF010000474 DATIFF010000000
VERSION     DATIFF010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4623
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_369338"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..749)
                     /locus_tag="VLD58_07045"
     CDS             complement(<1..749)
                     /locus_tag="VLD58_07045"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase"
                     /protein_id="HSB54094.1"
                     /translation="MRILQLSDSHVRRPGDPLSGRVETLPFLEHAVSFVERLTPRPDV
                     VIVTGDIVDLGLPEEYELARAALARLTLPVLVLPGNHDERGHCRAALGHCLGEVLGPD
                     CLAYVDDRFPVRIVALDSVIPMRGEGRLGAPQLEWLARTLAAGAARPTVVALHHPPFD
                     VGIGFMDRLGLEDREELLAILSRHPQVVGVLAGHVHRTIIRRLGHAVGMIAPSTAHQI
                     PLELKEEGPEVFDFEPPGCLLHEGDGSGLRS"
     gene            complement(854..3625)
                     /locus_tag="VLD58_07050"
     CDS             complement(854..3625)
                     /locus_tag="VLD58_07050"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: protein motif:HMM:NF012532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HSB54095.1"
                     /translation="MTTETTRPFPETLPESTDRLAAEAAHYATEVAELLFGLLVEVVK
                     AKQPGLEAVLHGVESDVASPDRLEAGLRAQGIWFQLLSIAEQNAGVRRRRQTETERGP
                     EQVRGTLAQVLHDASGEKLASAERVRELLGELRIRPTITAHPTEAKRVTVLEKHRRIY
                     RRLVDLESPRWTPRERHQIIDGLKNDIELLWMTGELRLEKPTVPQEVYWGLHFFSETL
                     FEATSETLEKLDRVLSQTFPGERFLIPPFLQFGSWIGGDRDGNPFVTNEVTRRTLHEN
                     RLASLYRYRQRLTELLRTLSITERAIDPGPAFRQGLERALAQVPDGAAIVTRNPGEIF
                     RHYLAAMTARLNGAIAYAEQGRTAPTGQGYATADELLNDLRTVELGLAQGGSPRLAAT
                     LVRPVRREAEAFRFSTVRLDLRENSTRLGQALAALWRVSTGSEGEPPAQNSDEWKAWL
                     LGELARPRKGDRDLSVFPTEVQETMGMFRVVREMRAELDREAFGSFVLSMTREVADVL
                     GAYLLAKEAGLFADEAGLESCTLPIVPLFETIDDLHRAPAIMRELLGTPVVRRSVRAL
                     GGTQEVMIGYSDSNKDGGFLSSNWELSKAQMRLTRLGEELGVPISFFHGRGGSVSRGG
                     APLGRAIAAQPAGSVHGRMRLTEQGEVVSFKYANRGTAQYQLELLTAGVIEHTLRSQR
                     EAALVPTSEFDEAMEALSGAAQASYRRFVEKPNLITYFAAASPLEELTLLNIGSRPAR
                     RTGARTLADLRAIPWVFAWSQNRHFITGWYGMGSGLLTFLQVRGERGEKLIQRMYSDS
                     RLFRLVIDEVDKTLCYVDLDIARMYADLVPDADLRNEIFSLVQEEYARTVEAVLRVTG
                     SKEPAERFPRFRRRLYRRLPTINQVSRQQVELLRRFRASAGEQERQQYLSSLLLSINC
                     ISSGFGATG"
     gene            complement(3622..>4623)
                     /locus_tag="VLD58_07055"
     CDS             complement(3622..>4623)
                     /locus_tag="VLD58_07055"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008465 - glycerate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HSB54096.1"
                     /translation="AAQEAAGDAVSARPRVVITRKIPAACEAEASQRFDAVINRDDVP
                     LTAAQLQDALRTADGLLPTVTDKVTAEVLSAEPLRAKIIANFGVGFNNIDINAAKARG
                     LTVTNTPDVLTDDTADIGMTLLLMVARRGAEGDRHVRKKEWTGWRPTHMLGAKVTGKT
                     LGLVGFGRIARAVARRAHHGFGMKVIFHDPFPPKPEEAKALGAEPRDSIEQVLGEADF
                     VSLHCPATPETRHLINSQRLKQMQRHAFLINTARGDVVDEAALVQELKAGTIAGAGLD
                     VYEKEPQVAPELLTMENVTLLPHLGSATLETRVAMGMRAIENLTLFFAGQPVRDRVV"
BASE COUNT          705 a         1608 c         1571 g          739 t
ORIGIN      
        1 tggctccgga gcccgctccc atccccctcg tgtaacaggc accccggcgg ctcgaagtca
       61 aagacctcgg gtccttcttc cttgagctcc agtggaatct ggtgggccgt gctcggcgca
      121 atcatgccga cggcgtgacc cagccggcgg atgatggtgc gatgcacatg ccccgccagc
      181 actcccacca cctgtggatg ccgtgacagg atggcgagca gctcctcacg gtcctcgaga
      241 cccagccggt ccatgaaccc gatgccgaca tcgaacggcg ggtgatgcaa cgccaccacc
      301 gtaggccgcg cggcgcccgc ggcgagggtc cgcgcgagcc actcgagctg cggggccccg
      361 agacgaccct ctccccgcat cggaattacg gagtcgagcg ccacgatccg caccgggaac
      421 cggtcgtcga cgtacgccag acagtcgggg ccgagcacct cacccagaca atgccccagc
      481 gccgcccggc agtgaccgcg ttcgtcgtga ttgcccggta ggaccagcac cggcagcgtg
      541 agccgcgcca gcgcggcacg ggccagctcg tactcttccg ggagcccgag atccacgatg
      601 tcgccggtga cgatgacgac atcgggccgc ggcgtgagcc gctccacgaa cgacaccgcg
      661 tgttccagga aggggagcgt ctcgacccgg ccggagaggg gatcgcctgg gcggcggaca
      721 tgggagtcgg agagttggag aatgcgcatt tcaggcggtc aggcggcaaa gcggcaaggc
      781 ggtcagtggg attgtggcca cgtcacaagg tacatcccac cccaatctct tgccgccttg
      841 ccgccttgcc gccttaccct gtcgccccga acccgctcga aatgcagttg atcgacaaca
      901 gcagcgacga caaatactgc tgccgctcct gctcccccgc cgaggcgcgg aaacggcgca
      961 gcagctcgac ctgctggcgg ctcacctggt tgatcgtcgg caggcgacga tagagccggc
     1021 gccggaagcg tgggaaccgt tctgccggct ccttgctgcc ggtgacgcgg agaacggcct
     1081 cgacggtcct ggcgtactcc tcctgcacca gcgagaagat ctcgttcctg aggtccgcat
     1141 ccggcaccag gtcggcgtac atccgcgcga tgtcgagatc gacgtagcag agggtcttgt
     1201 ccacttcgtc gatgaccagc cggaagagcc gtgagtcgct gtacatccgc tggatcagct
     1261 tctccccccg ctcgccgcgg acctggagga aggtgagcag cccgctcccc atcccatacc
     1321 agccggtgat gaagtgccgg ttctgcgacc aggcgaagac ccacggaatc gcgcgcaggt
     1381 cggccagcgt gcgagcgccg gtgcgccgcg cgggacgcga gccgatgttg agaagggtca
     1441 gctcctcgag cgggctcgcc gcggcgaaat aggtgatcag gttgggcttc tcgacaaagc
     1501 ggcgatacga cgcctgggcc gcgcccgaca gcgcctccat cgcctcgtcg aactcgctgg
     1561 tcggcaccag cgccgcttcc cgctgggacc gcagggtgtg ctcgatgacg cctgccgtca
     1621 gcagttccag ctgatactgg gccgtgccgc ggttggcgta cttgaaggag accacctcgc
     1681 cctgctcggt cagccgcatc cggccatgca ccgatcccgc cggctgcgcg gcaatggccc
     1741 gcccgagcgg cgcgccccct cggctcaccg agccgccccg gccatggaag aacgagatcg
     1801 gcacgcccag ctcctcaccc agccgcgtga ggcgcatctg ggccttggag agttcccagt
     1861 tgctcgagag aaagccgccg tccttgttgc tgtcggagta cccgatcatc acttcctggg
     1921 tcccgcccag cgcccgcacg cttcgccgga ctacgggcgt gccgagcagc tcgcgcatga
     1981 tggccggcgc gcgatgcagg tcgtcgatgg tctcgaagag cgggacgatc gggagggtgc
     2041 agctctcgag ccccgcctcg tcggcgaaga gacccgcctc cttggccagc aggtaggcgc
     2101 cgaggacatc ggccacctcg cgggtcatgc tgagcacgaa gctgccgaac gcctcacggt
     2161 cgagttcggc ccgcatctcc cggaccaccc ggaacatccc catcgtctcc tgcacctcgg
     2221 tcggaaagac gctgaggtcg cgatcgcctt tgcggggccg ggccagctca cccaggagcc
     2281 aggccttcca ttcgtcggaa ttctgggccg gcggctcgcc ctcgctgccg gtcgagaccc
     2341 gccagagcgc ggccagtgcc tgacccagcc gggtcgagtt ctcccgcagg tccagcctga
     2401 cggtgctgaa ccggaatgcc tcggcctccc gccgcaccgg ccgcaccagc gtggcagcga
     2461 ggcgcgggct tccgccctgg gccaggccca gctcgacggt gcggagatcg ttgagcagtt
     2521 cgtccgcggt cgcgtaacct tgtcccgtgg gggcggtgcg cccctgctcc gcatacgcga
     2581 tagcgccatt caggcgcgcc gtcatggccg cgaggtagtg ccggaaaatc tcgcccggat
     2641 tgcgggtgac gatcgcggct ccgtccggca cctgtgccag cgcgcgctcc agcccctggc
     2701 gaaacgcggg ccccggatcg atcgcccgct cggtgatgct cagggtgcgg agcagctcag
     2761 tgagccgctg gcggtagcgg tagagactcg ccagccggtt ctcgtgcagc gtgcggcggg
     2821 tcacctcgtt ggtgacgaag ggattgccgt cgcggtcgcc gccgatccag gagccgaact
     2881 ggagaaacgg gggaatcagg aaccgctctc ccggaaaggt ctggctcagc acccggtcga
     2941 gcttttccag cgtctccgag gtggcctcga aaagagtctc gctgaagaag tgaaggcccc
     3001 agtagacctc ctgcggcact gttggcttct ccagccggag ctcgccggtc atccagagga
     3061 gctcgatgtc gttcttgagc ccgtcgatga tctggtgccg ttcgcgcggg gtccagcggg
     3121 gcgactcgag gtccaccagc cggcgataga tccggcggtg cttctcgagc accgtgacgc
     3181 gcttggcttc cgtgggatgg gcggtaatgg tgggacggat acggagctca cccaacagct
     3241 cgcggacccg ctcggcgctg gcgagcttct cccccgacgc gtcgtgcagc acctgcgcca
     3301 gcgtgccccg cacctgctcc ggcccccgct cggtctcggt ctgccggcgg cgccgcacac
     3361 cggcgttctg ctcggcaatg gagagaagct ggaaccagat gccctgggcc cggagccccg
     3421 cctccagccg gtcgggcgac gccacgtcgc tctcgacgcc gtgcagcacc gcctcgagcc
     3481 cgggctgctt ggccttcacc acctcgacca ggagcccgaa cagaagttcg gccacctcgg
     3541 tggcgtagtg cgccgcctcg gcggccagcc gatcggtcga ttccggcagc gtctccggga
     3601 acgggcgggt cgtctccgtg gtcacacgac ccgatcgcga accggttggc cggcgaagaa
     3661 gagcgtgagg ttttcgatcg cgcgcatgcc catggccacc cgggtctcga gcgtggcgct
     3721 ccccaggtgc ggcaggaggg tgacgttctc catggtcaga agttcgggcg ccacttgcgg
     3781 ctccttctcg tatacgtcga gaccggcgcc ggcaatggtg ccggccttga gttcctgaac
     3841 cagcgccgcc tcgtcgacca catcgccgcg ggcggtgttg atcaggaagg cgtgccgctg
     3901 catctgcttg aggcgctggc tgttgatgag atgccgggtc tcgggtgtgg ccgggcaatg
     3961 gagcgacacg aagtccgcct ccccgaggac ctgctcgatc gaatcgcggg gctcggcgcc
     4021 cagcgccttc gcctcctcgg gcttgggggg aaagggatcg tggaagatca ccttcattcc
     4081 gaagccgtgg tgggcccgcc gggcgaccgc gcgggcgatc cgtccgaagc ccaccagacc
     4141 gagcgtcttg cccgtcacct tggcgccgag catgtgggtc gggcgccagc cggtccattc
     4201 tttcttccgg acgtgacggt ccccttcggc tccgcgccgc gccaccatca ggagcagcgt
     4261 catgccgatg tcggccgtgt cgtcggtcag gacgtcgggg gtgttggtga cggtgaggcc
     4321 gcgggccttg gcggcgttga tatcgatgtt gttgaagccc accccgaagt tggcgatgat
     4381 tttcgcccgg agcggttcgg cgctcagcac ctcggccgtc accttgtcgg tgacggtggg
     4441 caggagcccg tcggcggtcc ggagcgcgtc ctggagctgg gccgcggtga gcggcacatc
     4501 gtcgcggttg atcaccgcgt cgaagcgctg gctcgcctcg gcttcgcagg cggcgggaat
     4561 cttccgggtg atgaccaccc ggggcctggc gctcaccgcg tcaccagccg cttcttgggc
     4621 ggc
//
LOCUS       DATIFF010000475         1595 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1908405, whole genome shotgun sequence.
ACCESSION   DATIFF010000475 DATIFF010000000
VERSION     DATIFF010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1595)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1595)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1595
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1908405"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            123..1400
                     /locus_tag="VLD58_07060"
     CDS             123..1400
                     /locus_tag="VLD58_07060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HSB54097.1"
                     /translation="MLRRLTSLSLTWWIFLGMAGGILLGYVEPGFAAQLKPLSTVFLR
                     MIKSVVTPIIFGTLVIGIAGHGDDLKRIGRLAVKSLGYFWAMTAVALVIGLVSVHLTR
                     PGIGVILPAPDPHAPIPKAAPTTFAGFLEHIVPTSFFQAAAENEVLQVVFWATLFGIA
                     LTQVRGKPKEAMLEFCEGLAQVMFRFVGIVMKYAPIGIGAAMAVTVSHSGIQVLKNLG
                     MLVATLYGALIVFALVALIPMALLARIPLRRFVRAVKDPAIIAFTTTSSDAALPLAME
                     RMIEFGVPRRIVAFVMPTGYSFNLDGSTLYLGVASIFVAQAAGVELTVGTQLLMMFTL
                     LITSKGIAAVPRASLVVLSGTLTAFGLPLEGIAVILGVDELMDMARTMVNLVGNCLAT
                     AVMARWEGELGPEIAQGTLAGRPEPITLERTGT"
BASE COUNT          214 a          573 c          550 g          258 t
ORIGIN      
        1 gccgccgtca cccgggagct ggaagaggac ggggtcgcca agttcgccgc gtcctacgcc
       61 gcggtgctgg cgacgatcga ggccaaggcc ggcgccctcg ccgtcgccga cggacgctag
      121 ccgtgctccg ccggctcacc agcctctcgc tcacctggtg gatcttcctc gggatggcgg
      181 ggggcatcct gctgggctac gtcgagcccg ggttcgccgc gcagctcaag ccgctctcca
      241 ccgtgttcct ccggatgatc aagtcggtgg tgacgccgat catcttcggg accctggtga
      301 tcgggatcgc cggccacggc gacgatctca agcggatcgg ccggctggcg gtcaagtcgc
      361 tgggctactt ctgggcgatg acggcggtgg cgctggtgat cgggctggtc tcggtccacc
      421 tcacccgtcc cggcatcggg gtcattctcc ccgcccccga cccccacgct ccgatcccca
      481 aggcggcgcc gaccacgttc gccgggttcc tcgagcacat cgtccccacc agcttcttcc
      541 aggccgccgc ggagaacgag gtgctccagg tggtcttctg ggccaccctg ttcggcatcg
      601 ccctgaccca ggtgcggggc aagccgaagg aggcgatgct cgagttctgc gaggggctgg
      661 cccaggtgat gttccgcttc gtcggcatcg tcatgaagta cgccccgatc ggcatcggcg
      721 ccgcgatggc ggtgacggtg agccacagcg ggatccaggt gctcaagaac ctgggcatgc
      781 tggtggcgac cctgtacggc gcgctgatcg tgttcgcgct ggtggcgctg ataccgatgg
      841 cgctgctggc gcggatcccg ctccgccgct tcgtccgcgc ggtcaaggac ccggccatca
      901 tcgccttcac caccaccagc tccgacgccg cgctgccgct ggcgatggag cggatgatcg
      961 agttcggggt gccccgccgg atcgtcgcct tcgtgatgcc cacgggatac tcgttcaacc
     1021 tcgacggctc gaccctgtac ctgggcgtcg cgtcgatctt cgtggcccag gccgccgggg
     1081 tcgagctcac ggtgggcacc cagctgctga tgatgttcac cctgctgatc accagcaaag
     1141 ggatcgccgc ggtgccgcgg gcgtcactgg tggtgctctc gggcaccctg accgcgttcg
     1201 gccttccgct cgaggggatc gcggtcatcc tcggcgtgga cgagctgatg gacatggcgc
     1261 ggaccatggt gaacctggtg ggcaactgcc tggcgacggc ggtgatggcc cgatgggagg
     1321 gggagctggg gccggagatc gcccagggca cgctggccgg ccggccggag ccgatcaccc
     1381 tggagcggac cggcacctga gccggccggc atccggttag acttcgctca gacaccgaga
     1441 gggggcggac ccccacccga aaccgaggaa cctgccgatg ggcggacgat ctgccggact
     1501 gatcctggga ctcgcgctcg cttccgcccc cgccgccgcc cagcgccccg ccgcccccgc
     1561 tccaccgccc ccagcccgct cggcgccggt gacca
//
LOCUS       DATIFF010000476         1184 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_523543, whole genome shotgun sequence.
ACCESSION   DATIFF010000476 DATIFF010000000
VERSION     DATIFF010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_523543"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..247
                     /locus_tag="VLD58_07065"
     CDS             <1..247
                     /locus_tag="VLD58_07065"
                     /inference="COORDINATES: protein motif:HMM:NF024183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HSB54098.1"
                     /translation="QAMAARDQAMEKARNVDFLGQRDLAQVAAAVCPRCGAKTQGGKF
                     CPECGTPIATRRKCAHCGAEADGSPKFCPECGKPYGA"
     gene            483..>1184
                     /locus_tag="VLD58_07070"
     CDS             483..>1184
                     /locus_tag="VLD58_07070"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB54099.1"
                     /translation="MPSDPLKRLGTALAGRYTVERELGQGGMATVYLADDPKHHRKVA
                     IKVLRPEVGALLGADRFTREIRIAAGLNHPHILPLFDSGEVLVEHPERSEEQERLLFY
                     VMPYVRGGSLRQRLSREGRLAINEAVALIRQVAAALDHAHSHGLIHRDIKPENILLHE
                     GEAMVTDFGIALAAGTDPGERLTKTGLMIGTPEYMSPEQAAGERDLDARSDVYSLGCV
                     LYELLAGEPPFTGPTP"
BASE COUNT          189 a          417 c          416 g          162 t
ORIGIN      
        1 gcaggccatg gccgcccgtg atcaggcgat ggagaaggcc cgcaacgtcg acttcctcgg
       61 ccagcgggac ctggcccagg tcgctgccgc cgtgtgcccc cggtgcgggg ccaagaccca
      121 gggagggaaa ttctgccccg agtgcggtac gcccatcgcc accaggcgca agtgcgctca
      181 ctgtggcgcc gaggccgacg ggtccccgaa gttctgtccg gagtgcggca agccgtacgg
      241 agcgtgaggt gagcaaagag ggtccgggag atgggcgacg gggcgtgccc tcccgccgcg
      301 ctccagattc gtctagaatg ccacgggccg ggaccccacg gtggccgccg tactgcccgg
      361 cccgaccacc ccgttcaccg accgctaccg cctcgaccac gggctgtgca gggtgcaccc
      421 ctgggcgagt cggctacgtc agtagccacc ctgccggagg ctgaaccgat gagccgcctt
      481 tcgtgccttc cgatccgctg aagcgtctcg gcaccgcgct cgcgggccgc tacacggtcg
      541 agcgcgagct tggccagggc ggaatggcca cggtctacct ggcagacgat ccgaagcatc
      601 atcgcaaggt ggcaatcaag gtgctccggc ccgaggtggg ggccctgctc ggcgccgacc
      661 gcttcacccg cgagatccgg atcgccgccg ggctcaacca cccccacatt ctgccgctgt
      721 tcgactcggg cgaggtgctg gtggagcatc ccgagcggag cgaggagcag gagcggctcc
      781 tgttctacgt catgccgtat gtgcggggcg ggtccctccg gcagaggctt tcccgggagg
      841 ggcgactcgc gatcaacgag gcggtcgccc tcatccggca ggtcgccgcc gccctggacc
      901 acgcgcacag ccacgggctg atacaccgcg acatcaagcc ggagaacatc ctgcttcacg
      961 agggcgaggc gatggtcacc gatttcggca tcgccctcgc ggcggggacg gacccggggg
     1021 agcggctcac caagaccggc ctgatgatcg gaacgcccga gtacatgagc cccgagcagg
     1081 cggcaggcga gcgcgacctg gatgcccgga gcgacgtgta cagccttggc tgcgtgctct
     1141 acgagctgct cgccggcgag ccgccgttca ccgggccgac gccg
//
LOCUS       DATIFF010000477         5110 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_830692, whole genome shotgun sequence.
ACCESSION   DATIFF010000477 DATIFF010000000
VERSION     DATIFF010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5110
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_830692"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(90..1517)
                     /locus_tag="VLD58_07075"
     CDS             complement(90..1517)
                     /locus_tag="VLD58_07075"
                     /inference="COORDINATES: protein motif:HMM:NF013007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6513 domain-containing protein"
                     /protein_id="HSB54100.1"
                     /translation="MAGEVRQVLFVTGKLAEPALRRTLAEMNPPFAWDVAVLKITVAA
                     LMTTPWIARFLAVPDGTDLILLPGLVEGDLAVLQQRFGVAVERGPKDLRDIPIHFGQA
                     RARQDYGAWDIEILAEINNAPKRPRDDVLREAEHYRDSGADLIDVGCTPGVAFPGLGD
                     LVRQLREMQLRVSIDSFDPSEITAAVEAGAEMVLSVNGSNLAVVDRLRGTGARVVAIP
                     GFGAGLDTLTPTLAALDRASVPYLIDPIIEPVGFGFMASLERYAEIQRRYPGVPQLMG
                     VGNITELTSADSTGINALLMAVCQEVGVKAVLTTEVIPWARGAVRELDVARRLMHHAV
                     TRRTLPKGVDDRLVTVKDPRILTYSEAELRELQSQVKDPNFRIFADRETITVFNHRLF
                     IRGTSIQEIFDQLGVEEASHAFYLGKELARASLAVSLGKTYRQEGQLNWGYLTPPEDA
                     NREHFKPTMRLGGGQTAKRQGGKNE"
     gene            complement(1517..1876)
                     /locus_tag="VLD58_07080"
     CDS             complement(1517..1876)
                     /locus_tag="VLD58_07080"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: protein motif:HMM:NF002017.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008124 -
                     4-alpha-hydroxytetrahydrobiopterin dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006729 - tetrahydrobiopterin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HSB54101.1"
                     /translation="MASNERTYTETEITDNLASLPGWYYEDGWIRRQYKTDGWLTTLA
                     LVNTIGFLAEAAYHHPDLTVTWAKVWVKLQTHSAGGITDKDWELARKIEQSVLWKPTG
                     GSLEGTPNKWVRGGDPK"
     gene            complement(2145..2933)
                     /locus_tag="VLD58_07085"
     CDS             complement(2145..2933)
                     /locus_tag="VLD58_07085"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSB54102.1"
                     /translation="MASDNTPPDSSQQLAGKRVLVTGASSGIGRAIALAAAQAGADVA
                     VTWRSNEAGANAVAADIRATGRRAVLLRADVGEADELKRLSELLREALGGIDAWVNNA
                     GADILTGQGATLSRREKLDLLLRVDLRGTMLASWSAVEMMRAQPTGGVIINMSWDHVT
                     RGLEGENPELFSAVKGGILSFSKSLARSVAPTVRVNVLGPGWIETAFGNGADTTFRRE
                     IAESIPMGRWGTPEDVAGAAVYLASDAARYVTGQMIMVNGGDVM"
     gene            2985..3704
                     /locus_tag="VLD58_07090"
     CDS             2985..3704
                     /locus_tag="VLD58_07090"
                     /inference="COORDINATES: protein motif:HMM:NF016367.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(5-formylfuran-3-yl)methyl phosphate synthase"
                     /protein_id="HSB54103.1"
                     /translation="MQLLVSVQNAEEARAACAGGAGIIDAKDPGRGALGPVTRVVLRE
                     IRDAVAADVPVSAALGDVASPSELEQALSGLPDGLAFIKLGFRGVAHTVLVGELLADA
                     VKCVSQSPPGPRVVAVAYADWREVGGLAPEAFPAIIERAGAHGLLVDTALKDGRTLPD
                     HLPADDLIALGSSLSVRGLTYALGGSLTPRDIPLARASGAGIIGVRGAVTVGGRAGAV
                     DVARVAAFASAVRASAEPSLR"
     gene            complement(3696..4265)
                     /locus_tag="VLD58_07095"
     CDS             complement(3696..4265)
                     /locus_tag="VLD58_07095"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54104.1"
                     /translation="MPPALVKIGGGIAAMPGVLERVAAAVAQAARQRPLVVIPGGGPF
                     ADQVRAFDREHRISADAAHWMAILAMDQYGFALADLIPSGRVVDDWNGIQTALAAGEI
                     PVLAPSRWLRAADELPHSWDVTSDALSAYLATLLGVEQLVLIKPVAGGVELLDPWFAR
                     TVPAGLDWLVLGAGEVERLGSVLTGPDSA"
     gene            4281..5030
                     /locus_tag="VLD58_07100"
     CDS             4281..5030
                     /locus_tag="VLD58_07100"
                     /inference="COORDINATES: protein motif:HMM:NF013168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HSB54105.1"
                     /translation="MELIPVLDLQHGRAVHARRGAREQYQPVHSALVPGKPGEAVALA
                     RAYRRLEAAHCYIADLDAIQGRPAQYALLRQLANPDSGFGTGLMVDAGLSAPEQVEPL
                     VAAGATTLVAGLESLPGFAELGGIVREAGDTPVVYSLDLMLGKPVRRRTGRIATQEAV
                     ALELGARAADAGCRGLLVLDLATVGSESGPRNLDLIDGLKRMIGLPVYTGGGVRSAED
                     LRTLAGIGCDAVLIGTALHSGSITTARFGAA"
BASE COUNT          763 a         1733 c         1782 g          832 t
ORIGIN      
        1 cgagaaagat gagatgaggc tgtcccagga agcgggcggc ggtctcggcg ggatcaggcg
       61 gtggagtcag ctcctcgacc aggggaaggt cattcattct tgccgccttg ccgctttgcc
      121 gtctgaccgc ctcccaaccg catcgtcggc ttgaagtgct cccggttggc gtcctcgggt
      181 ggcgtgaggt agccccagtt gagctgccct tcctgtcggt aggtcttccc gagcgacacc
      241 gcgaggcttg cccgggccag ctccttgccg agatagaacg cgtggctcgc ctcctcgacg
      301 ccgagctggt cgaagatctc ctggatactg gtgccgcgga tgaagaggcg gtggttgaag
      361 acggtgatcg tctcgcggtc ggcgaagatc cggaagttgg ggtccttcac ctgcgactgg
      421 agctcgcgga gctcggcctc gctgtaggtg aggatccggg gatccttgac ggtgacgagc
      481 cggtcgtcca cgcccttggg aagggtgcgg cgggtgacgg cgtggtgcat cagccgccgg
      541 gcgacatcga gctcgcgcac cgcgccccgg gcccagggaa tcacttcggt ggtgagcact
      601 gccttgacgc cgacttcctg gcagacggcc atcaggagcg cgttgatgcc ggtggagtcc
      661 gcgctggtga gttcggtgat gttgccgacg cccatgagct ggggcacgcc cgggtagcgc
      721 cgctggatct cggcgtagcg ttcgagcgag gccatgaagc cgaaaccgac cggctcgatg
      781 atggggtcga tgagataggg aaccgatgcc cggtcgagtg ccgcgagggt gggcgtcagc
      841 gtgtcgagcc ctgcgccgaa gccgggaatg gcgacgacac gggcgccggt gccgcgcaac
      901 cggtcgacca cggccaggtt ggagccattc acgctcagca ccatctcggc gccggcttcg
      961 acggcggcgg tgatctccga aggatcgaac gaatcgatac tcacccggag ctgcatttcc
     1021 cggagctgtc ggacgaggtc accgaggccc gggaaggcca cgcccggagt gcagccgacg
     1081 tcgatcaggt cggcgcccga atcgcggtag tgttccgcct cgcgcagcac gtcatcgcgg
     1141 gggcgcttgg gagcgttatt gatctcggcc aggatctcga tgtcccaggc gccatagtcc
     1201 tgacgagccc tggcctggcc gaaatggata gggatgtcgc gcaggtcctt ggggccgcgt
     1261 tcgacggcaa cgccgaagcg ttgctggagc acggcgaggt cgccctcgac cagcccgggg
     1321 aggaggatga ggtcggtgcc gtcggggacg gcgaggaagc gcgcgatcca gggcgtggtc
     1381 atcagcgcag cgacggtgat ctttaggacc gcgacgtccc acgcaaacgg cgggttcatc
     1441 tccgccaggg tccggcggag cgccggctcg gccagcttgc cggtgacgaa gagaacctgc
     1501 ctgacctcac ccgccatcac ttcggatcgc cacccctcac ccatttgttg ggcgtaccct
     1561 cgagcgaacc gcccgtgggt ttccagagca ccgactgctc gatcttccgc gccagctccc
     1621 aatccttgtc ggtgatgccg ccggcagagt gggtctggag cttcacccag accttggccc
     1681 aggtgacggt gagatcggga tggtgatagg ccgcctcggc aaggaagccg atggtgttca
     1741 ccagggcgag ggtggtgagc cagccgtcgg tcttgtactg ccgccggatc cagccatcct
     1801 cgtagtacca gccgggaagc gaggcgagat tgtcggtgat ctcggtctcg gtgtaggtgc
     1861 gttcgttgct ggccatggca gaacctccgg ttcatcgaac tgcgattgca gcgtcatccc
     1921 gagtggagcg cggagctcag ggcgagtcgc gcgggtactg tcccttcggc gctgtagctc
     1981 gtgaggtcgc ttgggtcgca ggcgatgaca ggagctgacg cgcctgcggg accaccaccc
     2041 gcgctcctcg cctcgcaccg actttcccga ccctcagccc tcggctctcg gccccccaac
     2101 cctcgacccg tgacccgtga ccggtgaccc ccgaccccaa gcccctacat cacatccccg
     2161 ccattcacca tgatcatctg cccggtcaca taccgcgcgg cgtccgatgc gagatagacc
     2221 gcggctcccg ccacatcttc cggcgtcccc cagcggccca tcggaatgct ctccgcaatc
     2281 tcccgccgga aggtggtgtc ggcgccgttg ccgaaggccg tctcgatcca tccggggccc
     2341 agcacgttca cccggactgt cggcgccacc gagcgggcca gcgacttgct gaagctgagg
     2401 atcccgcctt tcaccgcgga aaagagttcg ggattctctc cttccagccc gcgggtgaca
     2461 tggtcccacg acatattgat gatcacgcca ccggtgggct gggcccgcat catctcgacc
     2521 gcagaccacg atgcgagcat ggtgccgcgg aggtccaccc tgaggagcag gtcgagcttc
     2581 tcccgccggg agagggtagc gccctggcca gtgaggatgt cggcgccggc gttgttgacc
     2641 caggcgtcga tgccgcccag cgcctcgcgg aggagctcgc tcaggcgctt gagctcatcg
     2701 gcctcgccga catcggcccg caggagcacc gcccggcggc cggtggcgcg gatatcggcc
     2761 gcaacggcat tggcgccggc ctcgttgctc cgccacgtga ccgcgacatc ggcgcctgcc
     2821 tgtgcggcgg ccagcgcaat ggcccggccg atgccgctcg aagcgcccgt caccagcacc
     2881 cgcttcccgg cgagttgctg tgaggaatcg ggaggcgtgt tgtcgctggc catggtccgg
     2941 cgtaacatac cgggcccccg acggcattca agggactggt gcggatgcaa ctgctggtga
     3001 gtgtgcagaa cgcggaagag gcgcgcgcgg cgtgtgccgg gggcgcgggg atcatcgatg
     3061 ccaaggaccc cggccgcggc gcgctcggac cggtcacccg ggtggtgctc cgggagatcc
     3121 gggacgcggt agcggccgat gtcccggtca gcgccgccct gggcgatgtc gcctctccga
     3181 gcgagctcga gcaggcattg agcggcctgc cggatggtct cgccttcatc aagctgggct
     3241 ttcgcggcgt ggctcacacc gtcctggtgg gagaactcct ggcggatgcg gtgaagtgtg
     3301 tgtctcagtc tccccccggg cctcgcgtgg tcgcggtggc ctacgccgat tggcgcgagg
     3361 tgggcggcct cgcccccgag gcgttcccgg ccatcatcga acgggccggc gcccatggct
     3421 tgctggtcga caccgcgctc aaagatgggc gaaccctgcc cgaccatctt ccggccgatg
     3481 atctgatcgc actgggcagc tcgctttccg tacgggggtt gacctacgca ctgggtgggt
     3541 cgctcacgcc acgcgacatt ccgctggcgc gagcatcggg cgccggcatc atcggggtgc
     3601 gaggggcggt gacggttggt ggacgtgcgg gtgcggtcga tgtggcccgg gtcgccgcct
     3661 ttgccagcgc ggtgcgagcg agcgccgagc cctcgctacg ctgagtcagg tccggtcagg
     3721 acacttccca gccgctccac ttctcccgct cccagaacca gccagtcgag tcccgccgga
     3781 accgtccgcg caaaccacgg atccagcaac tccactcctc ccgccaccgg cttgatcagc
     3841 accagctgct cgacaccgag cagcgtcgcg agataggccg acagggcgtc gctggtgacg
     3901 tcccagctgt ggggcaactc gtccgcggcg cggagccagc gcgacggcgc gagcacgggg
     3961 atctcacctg cggcgagggc tgtctggatc ccattccagt catcgactac ccgccccgag
     4021 ggaatcaggt ctgccagcgc gaatccgtac tggtccatgg ccaggattgc catccagtgg
     4081 gcggcatcgg ccgagatccg gtgctcccgg tcaaaggcgc gcacctggtc ggcgaagggg
     4141 ccgccgccag ggatcaccac cagtggccgc tgcctcgcgg cctgcgccac ggcggcggcg
     4201 acccgctcca gcacgccggg catcgccgcg atcccaccgc cgatcttcac cagggccgga
     4261 ggcatgtacc tttccgcgtc atggagctca tcccggttct cgatctccag cacggccgcg
     4321 cggtgcacgc ccggcgcggc gctcgggaac aatatcagcc ggttcactcc gcgctcgtgc
     4381 cgggcaaacc gggcgaggcc gtcgcgctgg cgcgcgccta ccgccggctg gaggcggcgc
     4441 actgctatat cgccgatctc gatgcgattc agggccggcc ggcccagtac gcgctcctcc
     4501 ggcaactcgc gaatccggac tccggcttcg gcaccggcct gatggtcgat gccgggctct
     4561 ccgcccccga gcaggtcgaa cccctggtcg cagccggcgc gaccacgctg gtcgccgggc
     4621 tggagtcgct ccccgggttc gccgagcttg ggggcattgt gcgcgaggca ggcgacactc
     4681 cggtggtgta cagcctggac ctgatgctgg gaaagccggt gcgccggcgg accgggcgga
     4741 tcgcgaccca ggaggccgtc gcgctcgagc tcggcgcccg ggcggccgac gcgggctgtc
     4801 gcgggttgct ggtgctcgac ctggccacgg tgggaagcga gagcggtccg cgcaacctcg
     4861 atctgattga cggtctcaag cggatgatcg gactgccggt ctacactggc gggggagtgc
     4921 gttcggcgga agacctgcgg accctcgccg ggatcggctg cgacgcggtc ctcatcggga
     4981 cggcgctcca ctcgggcagt atcacgacgg cgagattcgg cgccgcctga ggtacggcgg
     5041 tcagctcacc gcgagccggt aggtcgcggc ctgcccgaaa ctttcctcca cttccatctc
     5101 gatcgcggtc
//
LOCUS       DATIFF010000478         8848 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1600775, whole genome shotgun sequence.
ACCESSION   DATIFF010000478 DATIFF010000000
VERSION     DATIFF010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8848
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1600775"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1417)
                     /locus_tag="VLD58_07105"
     CDS             complement(<1..1417)
                     /locus_tag="VLD58_07105"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing SpoIIE family protein
                     phosphatase"
                     /protein_id="HSB54106.1"
                     /translation="MTAGQVPTPTGSVWLAPVPDAEGFWVEIGGVDASRAAEVAPQCC
                     SVLASFFAAEREMAEVTDELTGRYEEIDLLYAISEILGHTVRLEEAAQTIVREVSDVV
                     GARRASIMVYDEETGLLRAVAARGFSPEGLKPVTVTDPSSVAARVFREQRIILFDPTD
                     KLVQNPGASDPRAYKGQAYLSIPICYAAPGAGSRCVGVINLTDRLAGDTFTPGEAKLV
                     SAVANQIGAAIENARLVARDLRRQRLQRELELAHDLQLKLLPSPAVLQGDAEVAAICR
                     AVDSVGGDFYTFRRLGNNRVGVMLGDVSSHGFSAALVMALVMSAAGVHTGAGATPDEV
                     LTSMLESIGSELASTEMFLSVFYGVLDPRGQRLLYASAGHPHAYRIPKQGEPQRLPTT
                     APPLGLAGDAAIGMNQVPWVPGEDLLCLWTDGLVEQGVEGAFTEERLLHEIAQHRCEP
                     ADAIVRAVFAKADAASIRPVDD"
     gene            complement(1546..2022)
                     /locus_tag="VLD58_07110"
     CDS             complement(1546..2022)
                     /locus_tag="VLD58_07110"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB54107.1"
                     /translation="MTAPVPSSLRLTVRRRRVPSATGAMVQVSLRVPSDVACIEEVID
                     LLTRHCCSESWLCRRSRFNFRVAMAEALANAIVAGNQEDRSKWVDVEAELRGDQIRVE
                     VTDQGPGFDPSAVTTPLSPEDLDSPNGRGLFLIRQLVDDVSFNPQGNSICMTLRRH"
     gene            complement(2019..2360)
                     /locus_tag="VLD58_07115"
     CDS             complement(2019..2360)
                     /locus_tag="VLD58_07115"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HSB54108.1"
                     /translation="MAFTATKDANGVYLIRVEGQLIVGNRQELKTAVQEALDHAERRF
                     VIDFSRTGYIDSSGLGALVSISKKIREQGGELRLSGLNEDLRSLFELTKLDTLFSISD
                     TAERALGGFPA"
     gene            complement(2549..3475)
                     /locus_tag="VLD58_07120"
     CDS             complement(2549..3475)
                     /locus_tag="VLD58_07120"
                     /inference="COORDINATES: protein motif:HMM:NF013665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase"
                     /protein_id="HSB54109.1"
                     /translation="MSFRDELLHRAARQPARILFPESADPRVQAAVARLKEERIAEPV
                     LVGPGGLEPGRDHRLTRVAQWLRERRPDRVEDAVHALDLASDPLRFAASLVAMGEADG
                     CVAGAVHSTAEVLRAAIWAIGPAEGVETVSSAFYIVAPGQEVLTFTDCAVVPEPSAEQ
                     LAQIALAAARDRPALVGDAPRVAFLSYSTRGSAAGPRIDKVRAALERFRALAPDIPAD
                     GELQLDAAIDPAVAARKKAVDILGGRANILVFPDLDSGNIGYKIAQRLARAVALGPVL
                     QGLARPMSDLSRGASAEDIVEVAAMVGLQAGR"
     gene            complement(3472..3954)
                     /gene="coaD"
                     /locus_tag="VLD58_07125"
     CDS             complement(3472..3954)
                     /gene="coaD"
                     /locus_tag="VLD58_07125"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HSB54110.1"
                     /translation="MTRIAVYPGSFDPPTRGHTDLVHRSLALADRVIVAVARNSTKQP
                     LFTVEERLDMLRQVMGNEARVSFESFDGLLVDFARARGAGLIVRGLRAVSDFEYEFQM
                     AMMNRHLLPGLETVFLVPPEDATYLSSSLVREVARYGGDVSTLVHPVVDEALRRRFAK
                     "
     gene            complement(3951..4466)
                     /gene="rsmD"
                     /locus_tag="VLD58_07130"
     CDS             complement(3951..4466)
                     /gene="rsmD"
                     /locus_tag="VLD58_07130"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: protein motif:HMM:TIGR00095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HSB54111.1"
                     /translation="MRIVGGTLRGRRISPPKDPRVRPTADRVREAWMSILQEAIPGAR
                     VLDLYAGSGALGLEALSRGAAAADFVELNPKSLAALKENIAALALEARATVHRGDALR
                     FAERLAPAAYDVTFADPPYNRDDADRLVTLFRKTPFTRILAVEHPADAEVAGDDTRRY
                     GDTALTFCYAP"
     gene            complement(4468..6228)
                     /gene="recJ"
                     /locus_tag="VLD58_07135"
     CDS             complement(4468..6228)
                     /gene="recJ"
                     /locus_tag="VLD58_07135"
                     /inference="COORDINATES: protein motif:HMM:TIGR00644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008297 - single-stranded DNA
                     exodeoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HSB54112.1"
                     /translation="MAATPPEEVVQSLARSLTVSPALAALLAQRGLTAPEAARRFLRP
                     ALEDLADPFTLAGMDRAVELIAGAVKRGAGIMVHGDYDVDGQCATTVLTRALRIAGAK
                     VTPFVPHRLRDGYDLGTTGVAAAIAAGVQLIITCDCGITAVAAVEMARAAGIQVVVTD
                     HHLPGPVLPPADAIVDPQQEQDTSGLTQLCGTGIAFKLVQALVPALGLPANLPFHLLD
                     LVALATVADIVPLVGENRILVRHGLKLLSQSRWPGVRALIRVSGVGGKEIRAGQVGFI
                     LAPRLNAAGRVGDAADGLRLLLSDDESEAERLAVRLEGMNAERQALDQRMLEQAIEQV
                     ETQRDPAKDAALVLASEEWHPGVVGIVASRVVERYGRPAFLIALDGDIGKGSGRSISR
                     FDLHGALHQCGDLLERFGGHHMAAGLTLKRDRLEEFRERFAGVARAQLTDDDLGPEQR
                     VDLVIQLDEVTEALERLCRHLEPCGMGNPGPVFGARSIRFEGSRRVGNSHLKGLLAGS
                     SCRVGAIGFGWADRVPWLTYGTSCSVDVAFRVEQNDFQGSTSLQARIVALTPTDADRS
                     QAARVNETVVAPIATPASPA"
     gene            complement(6260..6967)
                     /locus_tag="VLD58_07140"
     CDS             complement(6260..6967)
                     /locus_tag="VLD58_07140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54113.1"
                     /translation="MHPDLVKLLELQAKDLDLLEADKALDAILAEYEALDQHLKGAQQ
                     AVDQAERSVAEAGKRRQEVEGKLENYRKLEERGKARLEQVRSPKEIQAVMTEMDLARS
                     VLAKEEADWVKLADVISGLERGGKEAATRLEELKAGQVEVRSALDLRRAAAENRRTDA
                     LKARDAVAQEVNRALRNRYERLRTVRVRVVVALDGAACGACYTTVPLNRRSQIRAGTL
                     IDSCESCGVILYADESD"
     gene            complement(7003..>8848)
                     /gene="dnaG"
                     /locus_tag="VLD58_07145"
     CDS             complement(7003..>8848)
                     /gene="dnaG"
                     /locus_tag="VLD58_07145"
                     /inference="COORDINATES: protein motif:HMM:TIGR01391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HSB54114.1"
                     /translation="HGGVRRMSMIPYEIIEQVRDSADLVSIIGDTVELKRTGADYRGP
                     CPFHGGQHRNFAVIPKKGRFYCFVCKESGDVFSWYMKRLGMDYPDAVREVARKLGIPI
                     PETATRQGPDPREPLFQAVSVAHDWFARQLREAPEAEEARKYLQGRGLDLETVEPLEL
                     GYAPKGPAFQHAMKQLGLDDATMLEAGLLARRDDGSVIPRFRGRLLFPIHDLRGRVVG
                     FGGRLLGPGEPKYLNSPESPVFHKGGTLYNLHAARNPIRKEESVILVEGYFDVQRLVL
                     AGQENVVAPLGTALTSEQAGLLKRFTGSAVLLLDSDTAGLKATFRAGDELLRHEMRVR
                     VATMPPGEDPDTLVQKQGLPALQAILKDAVDVLERKIQILDRKGWFADLEHRREALDR
                     LLPTIRATKDPIQRELYLSRVAEKTGVSKTVLEQEAAAVPAVEVRPVPRAIAATPDSR
                     AARSPEPRGEGSRAEQQLLRLMLASEEWRARAAEVVKPDWFAHPMVRRLFDQLAADRE
                     PGPAVPPPELEPTLAALWQRLSAVELPLDYTGQANQFAGATRRLEARPHLRKYRQLTE
                     RIRSATSEEMPALVAEKNAMHRDLLANYPEEFRVYGFNARRRSRLRNS"
BASE COUNT         1375 a         3035 c         3113 g         1325 t
ORIGIN      
        1 gatcatccac cggccggatg ctcgcggcgt cggccttggc gaagaccgcg cgcacgatgg
       61 cgtcggcggg ctcacagcgg tgctgcgcga tttcatggag caggcgctcc tcggtgaagg
      121 ctccttccac accctgctcc accagaccat cggtccagag gcagagcaga tcttcgcccg
      181 ggacccatgg gacctggttc atgccgatgg cggcgtcgcc ggcgaggcca aggggcggcg
      241 cggtcgtcgg caggcgctgc ggttcgccct gcttcggaat ccggtaggcg tggggatgac
      301 ccgcgctggc atagaggagc cgctggcccc gcggatcgag caccccgtag aacacggaga
      361 gaaacatctc ggtcgatgcg agttccgaac cgatgctctc gagcatcgag gtcagaacct
      421 cgtcgggcgt cgccccggcc ccggtgtgca caccggcggc ggacatcacc agcgccatca
      481 ccagcgccgc cgagaagcca tgcgacgaga cgtcgccgag catcacgccg acccggttgt
      541 tgccgagccg ccggaaggtg tagaagtcgc cacccacgct gtcgactgca cgacagattg
      601 ccgccacctc ggcgtcgccc tggagcaccg ccggcgaggg gagcagcttg agctggaggt
      661 cgtgggccag ctcgagctcg cgctgaagcc gctggcggcg gaggtcgcgg gccaccagac
      721 gggcattctc gattgccgcg ccgatctgat tggccaccgc cgagaccagc ttggcctcgc
      781 cgggcgtgaa ggtgtcgccc gccagccgat cggtcaggtt gatgacgccg acacagcgtg
      841 agcccgcacc gggcgcggcg tagcagatcg gaatgctgag ataggcctgg cccttgtagg
      901 cacggggatc gctggcgccg gggttctgga ccagcttgtc ggtgggatcg aagaggatga
      961 tccgctgctc ccggaagaca cgcgccgcca cggagcttgg gtcggtcacc gtcaccggct
     1021 tgaggccctc gggagaaaag ccccgcgccg cgaccgcccg gaggagcccg gtttcctcgt
     1081 cgtacaccat gatcgacgcg cgacgcgcgc ccaccacgtc ggaaacctcc cggacgatgg
     1141 tctgggccgc ctcctccagc cgcacggtgt ggcccaggat ttcactgatg gcgtagagga
     1201 gatcgatctc ctcgtagcgg ccggtcagct catcggtgac ctcggccatt tcccgctcgg
     1261 ccgcgaagaa cgatgccagc accgagcagc actgcggggc cacctcagcg gcgcgggacg
     1321 catcgacccc gccgatctcg acccagaaac cttcggcgtc gggaacgggc gcgagccaca
     1381 ccgacccggt cggtgtgggc acctgcccgg cggtcatcgg tatgggtggg gtgtacccgg
     1441 gatcggagct cccgaaggca cggagagccc gaccatcgaa acgccacagg cggacgcgag
     1501 cggcggtgag gccgctgagc gcgtccgcga cggactccag acccgtcagt ggcggcgcag
     1561 tgtcatgcag atggaattcc cctggggatt gaagctgacg tcgtcgacca attggcggat
     1621 caggaagagg ccgcggccgt tggggctgtc caggtcctcg ggcgaaagcg gcgtggtgac
     1681 agccgaggga tcgaagccag gcccctggtc ggtcacctcg acccggatct gatccccgcg
     1741 cagctcggcc tcgacgtcga cccacttgct gcggtcttcc tgattgccgg cgacgatcgc
     1801 gttggcgagc gcctcggcca tggcgacgcg gaagttgaag cggctcctcc ggcagagcca
     1861 gctctcgctg cagcagtgcc gggtgaggag atcgatcacc tcttcgatgc aggccacgtc
     1921 actcggcacc cggagggaga cctggaccat cgccccggtg gccgacggca ctcgccggcg
     1981 ccgcacggtg aggcggagcg acgaggggac gggcgcggtc acgctgggaa acctcccagg
     2041 gcccgctcag ccgtatcact gatcgagaag agggtatcga gcttggtcag ctcgaagagc
     2101 gagcgaaggt cctcgttgag cccggagagc cggagttccc ccccctgctc gcggatcttc
     2161 ttggagatgg agaccagcgc tcccaggccc gacgagtcga tgtagccggt gcgggagaag
     2221 tcgatgacga accgccgttc cgcgtgatcc agcgcctcct ggaccgcggt cttcagctcc
     2281 tggcgattcc ccacgatgag ctggccctcg actcggatga ggtagacgcc gttcgcatct
     2341 ttggtggcgg tgaacgccat gcttgggctc cgtgaaggtg cttggtggcg ttagccaatg
     2401 gccatcagcc gttagccatt agccgttagc tgccccgtcg cttctggatg attgtcgcag
     2461 gttgtccggc tcaccgcaag tccaatcagg gcaaggcact acctaatggc taacggctaa
     2521 cggctaacgg cccaaaccgc ggcccgaact aacgcccggc ctggagcccc accatcgccg
     2581 ccacttccac aatatcctcc gccgaggccc cgcgcgaaag gtcactcatg gggcgggcca
     2641 ggccttggag aaccgggccg agtgccacgg cccgggccag acgctgggcg atcttgtagc
     2701 cgatgttgcc ggaatcgagg tcggggaaga ccaggatatt cgcccggccg ccgaggatgt
     2761 cgaccgcttt cttccgggct gcaacggcgg gatcgatcgc ggcatccagc tgcagctcac
     2821 cgtcggcggg aatatcaggc gccagggccc ggaatcgttc cagggctgcc cgcaccttgt
     2881 cgattcttgg ccccgcggcg ctcccgcggg tgctgtagga caggaaggca acccggggcg
     2941 catcgcccac cagggcagga cggtcgcgcg ccgcggcgag ggcgatctgc gcgagttgct
     3001 cggcgcttgg ctcggggacc acggcgcagt cggtgaatgt cagcacctcc tgccccggcg
     3061 ccacgatgta gaaggccgag ctcaccgtct cgacgccttc ggcgggaccg atggcccaga
     3121 tcgccgcccg cagcacctcg gcggtggagt gcaccgcccc ggcgacgcac ccatcggcct
     3181 cgcccatggc aaccagggag gcagcgaagc gaaggggatc ggaggcgagg tcgagagcgt
     3241 ggaccgcgtc ttcgacccgg tcggggcggc gctcgcggag ccactgcgcc acgcgggtga
     3301 gccgatgatc gcgccccggc tcgagaccac cgggccccac cagcaccggt tcggcaatgc
     3361 gctcctcttt gagccgggca acggcggcct ggacgcgggg atcggccgac tcgggaaaga
     3421 gtatccgcgc cggctgccgg gcggcgcgat ggagcagttc gtcgcggaag ctcatttggc
     3481 gaaccgccgg cgcagcgcct cgtccaccac aggatggacc agggtgctca catcgccacc
     3541 gtagcgcgcc acttcgcgca ccaggctcga gctcagatag gtcgcgtcct cgggcggcac
     3601 caggaagacc gtttcgaggc cggggagcag atggcggttc atcatcgcca tctggaactc
     3661 gtattcgaag tcgctcaccg cgcgcaagcc ccgcacgatc aggccagcgc cgcgcgctcg
     3721 ggcaaagtcc accagcagcc cgtcgaacga ctcgaagctc acccgggcct cgttgcccat
     3781 gacctggcgc agcatgtcga gccgttcctc gacggtgaag agcggctgct tggtggagtt
     3841 gcgcgccacc gccacgatga cccggtcggc cagcgccagg ctccggtgca ccaggtcggt
     3901 gtgcccgcgg gtcggtgggt cgaaggagcc aggatagacg gcgattcggg tcatggcgcg
     3961 tagcagaagg tgagggccgt atcaccgtat cgacgggtat cgtcgccggc gacctcggca
     4021 tcggccgggt gctcgactgc caggatgcgg gtaaacggag tcttccggaa gagggtcaca
     4081 agccgatcgg cgtcatcccg attgtagggc ggatcggcga aggtgacatc ataggcggcc
     4141 ggcgcgagcc gttcggcgaa gcggagcgca tcgccccgat gcaccgtggc gcgtgcctcg
     4201 agcgccaggg ccgcgatgtt ctccttgagg gcggcgagcg acttgggatt gagctccacg
     4261 aagtcggcgg cggcagctcc gcgagacagg gcctcgagac cgagggcgcc gctcccggcg
     4321 tagagatcca gtacccgggc gccgggaatc gcctcctgga ggatgctcat ccaggcctcg
     4381 cgcacccggt cggcggtggg ccggacccgg gggtctttgg ggggcgagat ccgcctcccg
     4441 cggagcgtcc cgccgacgat gcgcacgtca ggcgggagag gccggagtcg cgatcggggc
     4501 caccaccgtc tcgttcaccc gagcggcctg cgagcggtcc gcatcggtcg gggtcagggc
     4561 cacgatccgc gcctggagcg aggtcgagcc ctggaagtcg ttctgctcca cccggaatgc
     4621 gacgtcgacc gaacaggagg tgccgtaggt gagccacggc acccggtcgg cccagccaaa
     4681 tccgatggcg ccgacccggc agctgctccc ggcgaggagt cccttgaggt ggctgttgcc
     4741 cacccgtcgc gaaccctcga agcgaatgct gcgggcgccg aagaccgggc cgggattgcc
     4801 catgccgcag ggctcgaggt ggcggcagag ccgttcgagc gcctcggtca cctcgtcgag
     4861 ctggatcacc aggtcgaccc gctgctcggg accgagatcg tcgtcggtga gctgggcccg
     4921 ggcgacgccg gcgaagcgct cccggaattc ctccagccgg tcgcgcttga gggtgagccc
     4981 ggccgccatg tggtgtccgc cgaagcgctc cagcaggtcg ccgcactggt gcagggcgcc
     5041 atggagatcg aagcgggaga tgctccggcc gctgcccttg ccgatgtcgc catcgagcgc
     5101 gatgaggaag gcgggtcggc catagcgctc caccacccgg ctggcgacga tgccgaccac
     5161 gccgggatgc cactcctcgg aggcgagtac cagggcagcg tccttcgcgg gatcgcgctg
     5221 ggtctccacc tgctcgatcg cctgctccag catccgctga tcgagggcct gacgctcggc
     5281 gttcattccc tcgagccgaa ccgccagtcg ttcggcctcg gactcgtcgt cggaaaggag
     5341 caggcgcaac ccgtcggcag catcgcccac gcggccggcc gcgttgagcc ggggcgccag
     5401 gatgaagccc acctgccccg cccgaatctc cttccctccg accccgctca cccggatcag
     5461 ggcccggacg ccgggccagc ggctctgact cagcagcttg agcccgtgac ggaccaggat
     5521 ccggttctcg cccaccagcg gcacgatgtc ggccacggtg gcgagggcta caaggtcgag
     5581 cagatggaac gggagattgg cgggcaggcc gagggcgggc accagcgcct gcaccagctt
     5641 gaaggcgatg ccggtcccgc acagctgggt caggcccgag gtgtcctgct cctgctgcgg
     5701 atcgacaatc gcatcggctg gagggagcac cggcccggga aggtggtgat cggtgacgac
     5761 gacctggatg ccggccgccc tggccatctc gaccgcggcc accgccgtga tgccgcaatc
     5821 gcaggtgatg atcagctgga cgccggccgc gatggccgcc gcgaccccgg tggtaccgag
     5881 atcgtagccg tcgcgcaggc gatggggaac gaagggggtg accttggcgc cggcgatccg
     5941 gagggcccgg gtgagcacgg tggtggcgca ctggccgtcg acatcgtagt cgccgtgaac
     6001 catgatgccg gcgccacgct tcacggcccc ggcgatcagc tcgaccgcgc ggtccatccc
     6061 cgcgagggtg aagggatcgg cgaggtcctc gagggcgggc cgcaggaagc ggcgggccgc
     6121 ctcgggcgcg gtcagtcccc gctgcgccag cagggccgcg agcgccgggc tcaccgtgag
     6181 actccgcgcg agcgactgca ccacctcctc gggaggggtg gccgccaccg cccagcggag
     6241 agggggaacc gggaagcggt tagtcactct cgtcggcgta gaggatgacg ccgcagctct
     6301 cgcaggagtc gatcagcgtg ccggcccgga tctggctccg gcggttgagc ggcaccgtgg
     6361 tgtagcaggc gccgcaggcc gcgccgtcga gcgccaccac cacccgcacc cggacggtgc
     6421 ggagccgctc gtagcggttg cggagggcgc gattcacctc ctgggcgacg gcgtcgcggg
     6481 ccttgagcgc atcggtccgg cggttttcgg cagcggcgcg gcggagatcg agggcgctcc
     6541 gcacctcgac ctgtcccgcc ttgagctcct cgagccgggt ggcggcctcc ttgccgcccc
     6601 gctcgaggcc ggaaatgacg tcggcgagct tgacccaatc ggcctcttcc ttggcgagga
     6661 cgctccgggc gagatccatc tcggtcatca ccgcctggat ctccttgggg ctgcggacct
     6721 gctccagccg cgccttcccc cgctcctcga gcttccggta gttctccagc ttgccttcga
     6781 cttcctggcg gcgcttgccg gcctccgcga ccgagcgttc cgcctggtcc accgcctgct
     6841 gggcgccctt gagatgctga tcgagggctt cgtactccgc caggatggcg tcgagcgcct
     6901 tgtcggcctc gagcaggtcg aggtccttgg cctggagttc cagcagtttg acgaggtcag
     6961 gatgcatgat agttccgagt tccgggtgag gttcctgttt cgctaactat tgcgcagccg
     7021 cgaacggcgg cgggcgttga atccgtagac ccggaattcc tccgggtaat tcgccagcag
     7081 gtcgcggtgc atcgcattct tttcggccac cagcgccggc atctcttccg aggtggcgct
     7141 gcggatccgc tcggtgagct gccggtactt tcgcagatgc ggccgggcct cgagccgccg
     7201 ggtagccccg gcaaactggt tggcctggcc ggtatagtcg agcggaagtt ccaccgcgga
     7261 gagccgctgc cacagcgccg ccagcgtagg ctccagttcc ggcggcggca ccgccggacc
     7321 aggctcccga tccgcggcga gctggtcgaa cagccgccgc accatcggat gcgcgaacca
     7381 gtcgggcttg accacctcgg cggcgcgggc ccgccactct tccgaggcca gcatgagccg
     7441 gagcagctgc tgctcggccc ggctcccctc gcccctgggt tccggcgagc gggcagcgcg
     7501 ggaatcgggg gtcgccgcga tcgcgcgggg caccggccgc acctcgaccg cgggcacggc
     7561 ggcggcctcc tgttccagca ccgtcttcga caccccggtc ttctccgcca cccggctcag
     7621 atacaactcg cgctggatcg ggtccttggt ggcccggata gtgggcagca gccggtcgag
     7681 cgcctcgcgg cggtgctcga ggtcggcaaa ccatcccttc cggtcgagga tctggatctt
     7741 ccgctccagc acgtcgaccg cgtccttgag aatcgcctgg agcgcgggca atccctgctt
     7801 ctgcaccagg gtgtcgggat cctcgcccgg aggcatggta gccacccgca cccgcatctc
     7861 gtgccgcagc agctcatctc ccgcgcggaa ggtcgccttg aggccggcgg tgtcgctgtc
     7921 gagcaggaga accgccgagc cggtgaagcg cttgagcagg ccggcctgct cggaggtgag
     7981 cgcggtgccg agcggcgcca ccacgttctc ctgccccgcg agcaccagcc gctgcacgtc
     8041 gaagtacccc tccaccagga tgacgctctc ctccttgcgg atcgggttcc gggccgcgtg
     8101 gaggttgtag agcgtgccgc ccttgtgaaa gaccgggctc tcgggggagt tcaggtactt
     8161 gggctcaccg gggccgagca gccgcccgcc gaagccgacg acgcgccccc ggaggtcgtg
     8221 aatcggaaag aggagccgtc cccggaagcg gggaatcacg ctgccatcgt cgcgccgggc
     8281 aaggaggccg gcctcgagca tggtggcgtc gtcgaggccc agctgcttca tggcatgctg
     8341 gaaggcgggc cccttcggcg cgtagcccag ctccagcggc tccaccgttt cgaggtcgag
     8401 cccgcggccc tggagatact tccgcgcctc ttcggcctcg ggcgcctccc gcagctggcg
     8461 ggcgaaccag tcgtgcgcca cgctgaccgc ctggaagagc ggctcgcgcg gatcgggacc
     8521 ctggcgggtc gcggtctccg gaatgggaat gccgagtttc cgggccactt cgcgcaccgc
     8581 atcgggatag tccatcccca gccgcttcat gtaccaggag aagacgtcgc ccgattcctt
     8641 gcagacgaag cagtagaacc gccccttctt cgggatcacc gcgaagttgc gatgctgccc
     8701 gccgtggaag ggacagggcc cgcgatagtc ggccccggtg cgcttgagct cgaccgtgtc
     8761 cccgatgatc gagaccaggt cggcgctgtc gcgcacctgc tcgatgatct cgtagggaat
     8821 catgctcatt cggcgaactc caccatgg
//
LOCUS       DATIFF010000479         6407 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1909354, whole genome shotgun sequence.
ACCESSION   DATIFF010000479 DATIFF010000000
VERSION     DATIFF010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6407
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1909354"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(113..2959)
                     /gene="infB"
                     /locus_tag="VLD58_07150"
     CDS             complement(113..2959)
                     /gene="infB"
                     /locus_tag="VLD58_07150"
                     /inference="COORDINATES: protein motif:HMM:TIGR00487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HSB54115.1"
                     /translation="MVKTRVHDLAAEFGVPAEQLMNMLKDMNIFVRSHMSPLEDGQVS
                     AIRVRWEREKRKAAQASEEPAKKGKKKAATRATKAVAAEAEPVSEAGKPAKRRRTAAE
                     VAQAEAVLEAERVADALREEALGLTKPIEKKDEPMLPSSIEERARALFKDLPPLPAET
                     TEEPVVVPAAPVEKRPTLTPRADAETLFPPRPSAPVSSAPPSAPSGAPPRIPTRIPRP
                     VAPPGGGPTPRFNRPTPVFSSSNPSSGQGQRPSSGGPRPPGGRPSQTGRPSGAVGPAT
                     GERPKVFGPDAEKGGGRKKGKKPRRSSVDQEAVLANIEKTLAGMHRGTVKKGGRRDSS
                     GYQEALARAKEEREAEKTRIRVNEFISVSELADLMKVPATQIVQLAFKELGLMVTVNQ
                     RLDFDQIELIASEFGYQAVKEEEYAATTETPEQEDASDVGHLVARPPVVTIMGHVDHG
                     KTSLLDYIRKANVVAGEAGGITQHIGAYHVTLPSGKEITFLDTPGHQAFTAMRARGAQ
                     VTDIVVLVVSAEDAVMPQTVEAISHAKNAGVPMIVAINKIDLPAANVQKVKQDLLTHN
                     VVLEEFGGQVLSTAISAKKGTNVDQLLEQILLQAEILDLKANPERAASGTVVEATLDP
                     GKGPVATILVQKGMLHVGDNFICGKFSGRVRALYDERGKNVKEAGPSIPVQILGFEGV
                     PSPGDNFVVTTDAVEAREIAQKRQRLEREAQNRRTARGGSLEDISRALAQGQMGALRL
                     IIKADQGGPAEALADALGQLSTGEVRVDIVHRGVGSISESDVLLAKASGAIIIGFHVR
                     PDAGARNAAEREGVDVRTYRIIYEAVDDVRNALEGLLKPESKETVLGDAVVLALFKVS
                     KVGTIAGCQVKNGTIARTAKARVMRDGVQIYEGTLSSLKRFKDDVREVKEGLECGIGI
                     ENFNDLKVGDVIESYRIEEVKRTLASSASGSGAA"
     gene            complement(2960..3304)
                     /locus_tag="VLD58_07155"
     CDS             complement(2960..3304)
                     /locus_tag="VLD58_07155"
                     /inference="COORDINATES: protein motif:HMM:NF013417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal L7Ae/L30e/S12e/Gadd45 family protein"
                     /protein_id="HSB54116.1"
                     /translation="MEARTAAPRAEPILRLLGLGFRSGGVVIGVDQVREGLRADRFAC
                     IVVAEDASPRAQEKVVRLAAGRGIPLVGGPAAETIGSRLGRPAVMVVGVLDRALARGL
                     VDAGSGGAHMEA"
     gene            complement(3273..4595)
                     /gene="nusA"
                     /locus_tag="VLD58_07160"
     CDS             complement(3273..4595)
                     /gene="nusA"
                     /locus_tag="VLD58_07160"
                     /inference="COORDINATES: protein motif:HMM:TIGR01953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HSB54117.1"
                     /translation="MSGSPEVLTAIRELTSTKQLDRSELIDLLRDGIHAALARRYGPN
                     VRFELEFDELKGTIRIVRLRQVVETVEDNSSQISLEEARYEDPDFALGDMLEEDVPFA
                     EFGRLAVQAAKQRIIQRVREGERTRIRDEFASKVGELLSGEVQQIERGKLVIMLNKFR
                     EAEAIIPYREQNHREKFHQGDTIRAVLKRLEETPKGPRLILSRADPLFVKALFKLEVP
                     EIQQAIVEIRAWAREVGSRTKIAVISRDDAIDPVGACVGLKGSRVQAVVNELGGERID
                     IVPWSPDPERFARLALAPARVAKVFSDPASKTIQAVVDEDQLSLAIGRNGQNVRLASE
                     LTGWKIDLYSSREWLERGGEGPLFAPLPPEDEAGMQVPLTEIQGFSPELLAILNAAGY
                     TTLADVIDLEREDIEKIPGMTPERAEQFMVFLAELTTEDGGEDGSAAS"
     gene            complement(4611..5096)
                     /locus_tag="VLD58_07165"
     CDS             complement(4611..5096)
                     /locus_tag="VLD58_07165"
                     /inference="COORDINATES: protein motif:HMM:NF014617.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54118.1"
                     /translation="MGAEPLLEAVRRIVAGLGFDLVEFRKSGPPQRPAIQVRIDRPDS
                     RPGHGITAEDCVRASREIERLLEAPGGVGDRYTLQVSSPGLERPVRFPEHWRKYAGRV
                     VRITARGLKGRPRAVILDLPDEAHVRLRLPDGSEPVFAIDAIKEALLQDEPAVNHRHE
                     P"
     gene            complement(5297..6070)
                     /locus_tag="VLD58_07170"
     CDS             complement(5297..6070)
                     /locus_tag="VLD58_07170"
                     /inference="COORDINATES: protein motif:HMM:NF014619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase family protein"
                     /protein_id="HSB54119.1"
                     /translation="MQADSTGLVREVRLSGEVPRYEIPGWREHYGVVAGITGRGEGGG
                     RGFDLGLWTSAPVSEVMTRWRAFRQAEPGFGATILGNQVHRTEVAWHVDGAGWVQIEG
                     VDGHATATPGLLLTVTVADCVPLYLVDPVHRAIALLHSGWRGTAGGILERGVETLVER
                     SRTRVEDIVLHCGVSICGPCYEVGSEVMVGCGLPADGAGPWHADLRAVVAERARKLGI
                     AQISTSQFCSAHDQALFYSHRRSEGRDGRMVAYLGILPP"
     gene            complement(6060..>6407)
                     /gene="msrB"
                     /locus_tag="VLD58_07175"
     CDS             complement(6060..>6407)
                     /gene="msrB"
                     /locus_tag="VLD58_07175"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HSB54120.1"
                     /translation="EQYRVARQHGTEPAFTGEYWNSHEAGVYRCVACGSPLFKSDDKF
                     DSGTGWPSYTRPAESDAVETTTDRSYGMVRTEVHCARCDSHLGHVFPDGPKPTGLRYC
                     INSISLKLDRNAG"
BASE COUNT          946 a         2286 c         2096 g         1079 t
ORIGIN      
        1 tggatggcgg cgaacacagg cggtcaggcg gcacggcggc aaagcggcca gaccgagggt
       61 cggaacacct cgggacgctc tggccgcctt gccgctttgc cgctttgccg cctcacgcag
      121 ctcccgaccc cgacgccgag ctcgccagcg tccgcttcac ttcctcgatg cggtagctct
      181 cgatcacgtc gcccaccttg aggtcgttga agttctcgat gccgataccg cactcgagcc
      241 cttccttgac ctcgcgcaca tcgtccttga accgcttgag gctggagagg gtgccctcgt
      301 agatctgcac cccgtcgcgc atcacccgcg ccttggcggt ccgggcgatg gtgccgttct
      361 tcacctggca gccggcgatg gtgccgacct tgctcacctt gaagagcgcc agcacgacgg
      421 catcgcccag cacggtctcc ttcgattccg gcttgagcag cccttcgagg gcgttccgca
      481 cgtcgtccac cgcctcgtag atgatgcggt aggtgcgcac atccacccct tcgcgctcgg
      541 ccgcgttgcg ggcgccggca tcgggccgca cgtggaagcc gatgatgatg gctcccgacg
      601 ccttggccag cagcacgtcg ctctcgctga tcgaccccac gccgcggtgc acgatgtcca
      661 cccgcacttc gccggtggag agctggccca gcgcgtcggc cagcgcttcg gccgggccgc
      721 cctggtccgc cttgatgatc aggcggagcg cgcccatctg gccctgggcc agcgcgcgcg
      781 agatgtcttc cagcgagccg ccccgcgcgg tgcgccggtt ctgcgcctcc cgctcgagcc
      841 gctggcgctt ctgggcgatc tcccgggcct cgaccgcgtc cgtcgtcacc acgaagttgt
      901 cgcccggcga ggggacgcct tcgaagccga ggatctgcac cgggatcgac gggccggctt
      961 ccttcacgtt cttgccgcgc tcgtcgtaca gcgcgcggac ccggccggag aacttgccgc
     1021 agatgaagtt gtcgccgacg tggagcatgc ccttctgcac caggatcgtc gcgaccgggc
     1081 ccttccccgg gtccagcgtc gcttcgacca ccgtgcccga ggccgcccgc tcgggattgg
     1141 ccttgaggtc caggatttcg gcctgcagca ggatctgctc cagcagctgg tcgacgttgg
     1201 tgcccttctt ggccgagatc gcggtcgaca gcacctggcc gccgaactcc tccagcacca
     1261 cgttgtgggt cagcaggtcc tgcttcacct tctgcacgtt ggccgccggc aggtcgatct
     1321 tgttgatcgc cacgatcatc ggcacgccgg cattcttggc gtggctgatc gcttccaccg
     1381 tctgcggcat caccgcgtcc tcggccgaca ccaccaggac cacgatatcg gtcacctgcg
     1441 caccgcgggc ccgcatggcg gtgaacgcct ggtggcccgg ggtgtcgagg aaggtgatct
     1501 ccttcccgct cggcagggtc acgtggtagg cgccgatgtg ctgggtgatg ccgcccgcct
     1561 cacccgcgac cacgttggcc ttgcggatgt agtcgagcag cgacgtcttg ccatggtcga
     1621 cgtggcccat gatggtcacg accggcggcc gcgccacgag gtgcccgacg tcgctggcgt
     1681 cctcctgctc cggtgtttcc gtcgtcgcgg cgtattcctc ttccttcacc gcctggtagc
     1741 cgaactccga cgcgatcagc tcgatctggt cgaagtcgag ccgctggttc accgtcacca
     1801 tcaggcccag ctccttgaag gcgagctgga cgatctgggt ggccggcacc ttcatcaggt
     1861 cggcgagttc cgagaccgag atgaactcgt tcacccggat gcgggtcttc tccgcctcgc
     1921 gttcttcctt ggcccgggcc agcgcctcct ggtatccgga ggaatcgcgg cgcccaccct
     1981 tcttgaccgt gccgcggtgc atcccggcga gggtcttctc gatgttcgcc agcacggctt
     2041 cctgatccac tgaggagcgg cgcggcttct tccccttctt gcggccgccg cccttctcgg
     2101 cgtcgggccc gaagaccttg ggacgctcac ccgtggcggg accgacagct ccgctcgggc
     2161 ggccggtctg actgggacga ccaccaggcg gacggggccc gccggacgac gggcgctggc
     2221 cctgaccact ggatgggttg ctggagctga agaccggcgt gggccggttg aagcgcgggg
     2281 tcggaccacc gcccggaggc gccaccgggc ggggaatccg ggtcggaata cggggcggcg
     2341 ctcccgaggg cgccgacggc ggcgcggagg acaccggagc cgaggggcgc ggcgggaaca
     2401 gcgtctcggc gtcggccctg ggggtgagcg tcgggcgctt ctcgactggc gcggccggga
     2461 ccaccaccgg ctcctcggtg gtctccgccg gcagcggcgg caggtccttg aacagggccc
     2521 gggcccgctc ctcgatcgag gaggggagca tcggctcgtc cttcttctcg atcggcttgg
     2581 tcagccccag cgcctcttcc ctgagggcgt cggccacccg ctcggcctcg agcaccgcct
     2641 cggcctgggc cacttcggcc gccgtgcggc ggcgcttggc cggcttcccg gcttcgctca
     2701 ccggctcggc ctcggccgcg accgccttcg tggccctggt ggcggccttc ttcttcccct
     2761 tcttggccgg ctcttcggag gcctgggccg ccttccgctt ttcgcgctcc cagcgcacgc
     2821 ggatggcgga cacctgacca tcctcgagcg gagacatatg gctccgcacg aagatgttca
     2881 tgtccttgag catgttcatg agctgctcgg cgggaacgcc gaattcagca gccaggtcgt
     2941 gcacgcgagt cttgaccact caggcctcca tgtgagcgcc accggacccc gcatccacga
     3001 ggccacgggc cagcgcccga tccaacacac cgacgaccat taccgccgga cgtcccagcc
     3061 ggctgccgat cgtctcggcc gcgggtccgc ccacgagcgg gatgccccgg cctgctgcca
     3121 accgtaccac cttctcctgc gcccggggac tcgcgtcctc cgccaccacg atgcaggcga
     3181 accggtcggc gcgcagtccc tcgcgcacct ggtccacccc gatcaccacc cctcccgacc
     3241 tgaagcccag gccgaggagg cggaggatcg gctcagctcg cggcgctgcc gtcctcgcct
     3301 ccatcctcgg tggtgagttc ggcgaggaac accatgaact gttcggcccg ctccggcgtc
     3361 atcccgggaa tcttctcgat gtcttcccgc tccaggtcga tcacgtcggc cagggtggtg
     3421 tagcccgcgg cgttgaggat cgcgagcagc tcgggcgaga atccctggat ctcggtaagc
     3481 ggcacctgca tgccggcctc gtcctcgggc gggagcggcg caaacagcgg cccttcgccg
     3541 ccccgctcca gccactcgcg gctggagtag agatcgatct tccagccggt gagctccgag
     3601 gcgagccgca cgttctggcc attgcggccg atggcgaggg aaagctggtc ctcgtccacc
     3661 accgcctgga tggtcttgct cgccgggtcg gagaacacct tggcgacccg ggccggggcc
     3721 agcgccagcc gggcgaaccg ctccggatcg ggcgaccagg gcacgatgtc gatgcgctcg
     3781 ccgcccagct cgttgacgac ggcctgcacc cgggagccct tgaggcccac gcaggcgccc
     3841 accggatcga tggcgtcgtc gcgcgagatc acggcgatct tggtgcggct gccgacctcg
     3901 cgggcccagg cccggatctc gacgatcgcc tgctggatct cggggacttc cagcttgaag
     3961 agcgccttga cgaacagcgg atcggcgcgg gagagaatca ggcggggacc cttgggggtc
     4021 tcctccagcc gcttgagcac cgcgcggatg gtatcgccct ggtggaactt ctcccggtga
     4081 ttctgctccc ggtacggaat gatggcttcc gcctcgcgga acttgttgag catgatgacg
     4141 agcttgccac gctcgatctg ctgcacctcg cccgagagca gctcgcccac cttggaggcg
     4201 aactcgtcgc ggatccgggt gcgctcccct tcgcggaccc gctggatgat ccgctgcttg
     4261 gccgcctgaa ccgcgagccg cccgaactcg gcgaagggca cgtcttcctc gagcatgtcg
     4321 ccgagggcga agtcggggtc ctcgtagcgg gcctcctcca gcgaaatctg ggagctgttg
     4381 tcctcgacgg tctcgaccac ctgccgcagc cgcacgatcc ggatggtgcc cttgagctcg
     4441 tcgaactcga gctcgaagcg cacgttgggg ccgtagcggc gggccagcgc ggcgtgaatg
     4501 ccgtcacgca acagatcgat cagttcgctg cgatcgagct gcttggtgct cgtcagctcg
     4561 cggattgcag tcagtacttc cggggaaccg gacatccctc gtctcctgcc ctatggctcg
     4621 tggcggtggt tgaccgccgg ctcgtcctgc agcagcgctt ctttgatagc atcgatcgcg
     4681 aacaccggct cgctcccatc gggcaaccgg agccggacgt gcgcctcgtc gggtagatcg
     4741 aggatcaccg cgcgggggcg gcccttgagg ccacgggcgg tgatccgcac cacccggccg
     4801 gcgtacttcc gccagtgttc cggaaaccgg accggccgtt ccagaccggg cgaggatacc
     4861 tggagcgtgt aacgatcgcc gacgcccccc ggggcctcga gcagacgctc gatctcccgg
     4921 ctggcccgga cgcagtcttc ggcggtgatg ccatgcccgg gccgactgtc cgggcggtca
     4981 atgcggacct gaatggctgg gcgctgcggc gggccggact tcctgaactc gaccaggtcg
     5041 aatccaagac cggcgacgat gcggcggact gcctcgagca gcggctcggc acccatacgg
     5101 aggtacccga aaaaaaaagt gggggaactc ccccacctca ccgactgctg cgctcccgga
     5161 acagcgctca taacctaatg ggggaccgtg gggagtcaac tccgggcggt ggaaagtagg
     5221 gcgcgcgtcg ctgggtggaa agaaggcttg gggctttggg ctcggggccg ttcagcctca
     5281 gcctcaagcc ccaagcctaa ggaggcagga tccccaggta ggccaccatc cgaccgtccc
     5341 gcccctcact ccgccggtgg ctgtagaaga gcgcctggtc gtgcgctgag cagaattgtg
     5401 atgttgaaat ctgtgctatc cccaacttcc tggcccgctc cgccacaacg gcacgaaggt
     5461 cagcgtgcca gggcccggca ccgtccgccg gcaaaccaca cccgaccatg acttcagaac
     5521 ctacttcata gcacggcccg caaatgctta ctccacagtg caatacaata tcttcaacac
     5581 gagtacgact ccgttcaacc agagtctcaa ctccacgctc gagaattccc ccggccgtcc
     5641 cacgccagcc actatggagc aaggcgatcg cccggtggac ggggtccacc aggtagagcg
     5701 gaacgcagtc ggcgaccgtc acggtaagga gcaagccggg ggtcgcggtg gcgtggccgt
     5761 ccaccccttc gatctgaacc caccccgccc catccacgtg ccaggccacc tcggtccggt
     5821 ggacctggtt ccccagaatc gtggccccga acccgggttc cgcctgacga aaggctcgcc
     5881 agcgggtcat cacctcgctg accggcgcgc tggtccacag accgaggtcg aagccccgtc
     5941 ccccgccctc gccgcggcca gtgatcccgg ccaccacccc atagtgctcc cgccagccgg
     6001 ggatctcgta ccggggaacc tccccggaga gccggacctc ccggaccaga ccggtcgaat
     6061 cagcctgcat tccggtcgag cttgagcgag atggagttga tgcagtagcg gagcccggtc
     6121 ggcttgggcc cgtcaggaaa gacgtgaccg aggtgggaat cgcagcgggc gcagtggacc
     6181 tcggtccgga ccatgccgta gctccggtcg gtcgtggttt ctacggcatc ggattccgcc
     6241 ggacgggtat agctgggcca gccggtaccg gaatcgaact tgtcgtcgga tttgaagagg
     6301 gggctgccac aggcaacgca ccggtagacg ccggcctcgt gagagttcca gtactctccg
     6361 gtgaaggcgg gctcggtgcc atgctgccgg gcgacgcggt actgctc
//
LOCUS       DATIFF010000480         2033 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1909415, whole genome shotgun sequence.
ACCESSION   DATIFF010000480 DATIFF010000000
VERSION     DATIFF010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2033
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1909415"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..589)
                     /locus_tag="VLD58_07180"
     CDS             complement(<1..589)
                     /locus_tag="VLD58_07180"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB54121.1"
                     /translation="MLTLLSRAVEGAVIALDSLRSNKVRAALTVLGVAIGVTVVIAMA
                     SAITGINRSITGILEAAGPKTFFVFRYFSGGLEVSDGSDELSPWRRMPELTVDEAALI
                     RRLPAVREVNIEESSSGPVGYEGVNLTSVHVAGLSPTWIQVNGGDILTGRNFTPIEYA
                     ASAHVAVINDKLAESLFPGLDPIGKRIKIFGQPFEV"
     gene            complement(600..1841)
                     /locus_tag="VLD58_07185"
     CDS             complement(600..1841)
                     /locus_tag="VLD58_07185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB54122.1"
                     /translation="MPLWEAVRFALRTIWAQKLKSFFSLVGVLIGVTFLIAVVSIVQG
                     MNRYMVDRFANTLVGANTFELRQRPNIVMGNITDDVWREWRRRPRISYADADYVRERI
                     RTPATFAKFCEDRVAVSYGGKVAKDVILAGSEESYFRIRNYEITAGRTFTSQEVRAAT
                     PVLVIGTEVADKLLPGVDPLGKVVQIGGLPYRVIGVVAKQGTLFGLSLDKFAVMPFNA
                     PARRLICPINILDALIVRTDDPTRMQLALGEAEAAMRARRQLKPTQDDNFAFQTAEGA
                     LSTWAKISRILFFALPGLVAISLVVGGIVIMNIMLMAVSERTREIGIRKALGARRRDV
                     LAQFVVESATLSAAGAVMGIGLGLLLAYVVKMLTPLPAAVAPWSVAAGVLLGVSVGVA
                     AGVYPASRASRLDPIAALRAE"
     gene            complement(1842..>2033)
                     /locus_tag="VLD58_07190"
     CDS             complement(1842..>2033)
                     /locus_tag="VLD58_07190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrolide ABC transporter ATP-binding protein"
                     /protein_id="HSB54123.1"
                     /translation="EPTGNLDSVTSEEIMRVFGDLHRAGQTVIMVTHEPDIAAHAERV
                     VVLRDGRMESDRLARGAAA"
BASE COUNT          326 a          697 c          700 g          310 t
ORIGIN      
        1 tcacctcgaa tggctggccg aagatcttga tccgcttgcc gatcgggtcg agcccgggga
       61 agagcgattc cgccagcttg tcgttgatca ccgccacgtg ggcggacgcg gcgtactcta
      121 tcggcgtgaa gttccgcccg gtgaggatgt cgccgccgtt gacctggatc caggtcgggc
      181 tcagcccggc gacgtggacg ctggtgaggt tcaccccctc gtaaccgacc ggtccggagc
      241 tggactcctc gatgttcact tctcggacgg ccggcagccg gcggatcagg gccgcctcgt
      301 cgaccgtcag ctccggcatc cgccgccagg gcgacagctc gtcggagccg tcggagacct
      361 cgagcccgcc cgagaaatag cggaagacga agaaggtctt ggggcccgcc gcctcgagga
      421 tgccggtgat gctccggttg atcccggtga tcgcggaggc catcgcgatc accaccgtga
      481 ccccgatggc gacgccaagg accgtgagcg cggcgcgcac cttgttggaa cggagcgaat
      541 cgagggcgat caccgcaccc tccaccgccc gcgagagcag ggtcagcatg gagtgcccct
      601 cattcggccc tcagggcggc gatcggatcg agccgggagg cgcggctcgc gggatacacc
      661 ccggcggcga ccccgaccga caccccgagc agcacgccgg cggccaccga ccagggggcg
      721 acggcggcgg ggagcggggt gagcatcttc accacatagg cgagcagcag cccgagcccg
      781 attcccatca ccgcgccggc agccgagagg gtggccgact ccacgacgaa ctgggccagg
      841 acgtcccgcc gccgggcgcc gagcgctttc cggatgccga tctcgcgggt gcgctcgctc
      901 accgccatca gcatgatgtt catgatcacg atcccgccga ccaccaggga gatcgccacc
      961 agtcccggca gggcgaagaa gagtatccgg gagatcttgg cccacgtact cagcgcgccc
     1021 tccgcggtct ggaaggcgaa attgtcgtcc tgggtgggct tgagctgtcg gcgcgcccgc
     1081 atggcggctt cggcctcgcc cagggccagt tgcatccggg tcgggtcgtc ggtccggacg
     1141 atcagcgcgt cgaggatgtt gatcgggcag atcaggcggc gggccggcgc gttgaacggc
     1201 atgaccgcga acttgtcgag cgacaggccg aagagggtgc cctgcttcgc cactacaccg
     1261 atcacccggt agggcaggcc gccgatctgg accaccttgc cgagggggtc cacgccgggc
     1321 aggagcttgt ccgcgacctc ggtgccgatg accaggaccg gggtcgcggc ccggacttcc
     1381 tggctggtga aggtgcggcc ggctgtgatc tcgtaattcc ggatccggaa gtaactctcc
     1441 tcgctgcccg ccaggatcac gtccttggcc accttcccgc cgtagctcac ggcgacccgg
     1501 tcctcgcaga acttggcgaa ggtggccggc gtgcggatcc gctcccggac gtaatcggcg
     1561 tcggcgtagc tgatccgagg gcggcgccgc cattcccgcc agacgtcgtc ggtgatattg
     1621 cccatcacga tgttggggcg ttggcgcagc tcgaaggtgt tggcgccgac cagggtgttg
     1681 gcgaaccggt cgaccatgta ccggttcatc ccctggacga tcgagaccac cgcgatgagg
     1741 aaggtgaccc cgatcaacac cccgaccagg gagaagaagc tcttgagctt ctgggcccag
     1801 atggtccgga gcgcgaaccg caccgcctcc cacagcggca tctaggccgc cgctccgcgg
     1861 gcgagccggt cgctctccat ccgcccgtcc cgcagcacca ccacccgctc ggcgtgagcc
     1921 gcgatgtcgg gctcgtgagt gaccatgatg acggtctgcc cggcccggtg caggtcgccg
     1981 aagacccgca tgatctcctc gctggtgacg ctgtcgaggt tgccggtggg ctc
//
LOCUS       DATIFF010000481         1013 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2216405, whole genome shotgun sequence.
ACCESSION   DATIFF010000481 DATIFF010000000
VERSION     DATIFF010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2216405"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..603)
                     /locus_tag="VLD58_07195"
     CDS             complement(<1..603)
                     /locus_tag="VLD58_07195"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSB54124.1"
                     /translation="MTAGQVPTPTGSVWLSPVPEAEGFWVEIGGVEPTRAAELAPQCC
                     SVLSSFFAAEREMAEVTDELTGRYEEIDLLYAISEILGHTVRLEEAAQTIVREVSDVV
                     GARRASIMVYDEETGLLRAVAARGFSPAGLKPVTVTDPSSVAARVFREQRIIVFDPAE
                     KAVPSVGANEPRDYKGQAYLSIPICYAAPGSGSRCVGVINL"
     gene            complement(732..>1013)
                     /locus_tag="VLD58_07200"
     CDS             complement(732..>1013)
                     /locus_tag="VLD58_07200"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB54125.1"
                     /translation="VAMAEALANAIVAGNQEDRSKWVEVEAELGRDQIRVEVTDQGPG
                     FDPSAAMSPILPDELDSPNGRGLFLIRHLVDDVSFNPQGNSICMTLRRH"
BASE COUNT          170 a          336 c          352 g          155 t
ORIGIN      
        1 gaggttgatc acgccgacgc agcgggagcc ggagccgggg gccgcgtagc agatcgggat
       61 actcaggtag gcctggcctt tgtagtcccg cggctcgtta gcgccgacac tcggcaccgc
      121 cttttcagcg ggatcgaaca cgatgatccg ctgctcccgg aatacacgcg ccgccacgga
      181 gcttgggtcg gtcaccgtca ccggcttgag acccgcggga gaaaagcccc gcgccgcgac
      241 cgcccggagg agcccggttt cctcgtcgta gaccatgatc gaggcgcgcc gggcgcccac
      301 cacgtccgag acctcgcgca caatggtctg ggccgcctct tccagccgca cggtgtggcc
      361 caggatttca ctgatcgcgt agaggagatc gatctcttca tagcggccag tcagctcatc
      421 ggtgacctcg gccatctccc gctccgccgc gaagaacgac gagagcaccg agcagcactg
      481 gggcgcgagt tcggcggcgc gggtgggctc gaccccgccg atctcgaccc agaagccttc
      541 ggcttcgggg acgggcgaga gccacacgga gccggtcggc gtgggcacct ggccggcggt
      601 cattgggatg ggaggggtgt acccgggttc ggcgcctccg aaggcgcgga gggctcgacc
      661 atcgaaacgc cacaggcgga cgcgggcgcc ggtgaggccg ccgagcgcgt cagcaacaga
      721 ttccaaccct gtcagtggcg gcgcagtgtc atgcagatgg aattcccctg gggattgaag
      781 ctcacatcgt cgaccaggtg gcggatcagg aagagccccc ggccgttggg gctgtcgagc
      841 tcgtcaggca agatgggaga cattgcagcg gaaggatcga agccgggacc ctggtcagtc
      901 acctccaccc tgatctggtc gcggcccagt tcggcctcga cctcgaccca cttgctgcgg
      961 tcttcctggt tgcccgcgac gatcgcgttg gcgagcgcct cggccatggc gac
//
LOCUS       DATIFF010000482         1347 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1754961, whole genome shotgun sequence.
ACCESSION   DATIFF010000482 DATIFF010000000
VERSION     DATIFF010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1754961"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1347
                     /locus_tag="VLD58_07205"
     CDS             <1..>1347
                     /locus_tag="VLD58_07205"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB54126.1"
                     /translation="FSKIEAGKLVLENTTFDLHRVAYDVVELLQPKAREKQVELIVRL
                     APDLPSRLIGDEGRVRQVLLNLVGNAVKFTEAGHVRLAVRRDDHPDQVRFEVEDTGVG
                     IPLDKQEAIFDKFTQADASTTRRFGGTGLGLAICRQLVTLMGGEIGVTSVPGQGSTFW
                     FVLPLPAHGGPLASQLPQLPQGTRVLVVDDVAVVQELMTEMVGRMGALVDQAGDGLAA
                     LAALRRAARNHPYDAVLLDLALPDMDGLAIAQAVAADPDIAGTPIIAFSGANSRPRDS
                     ELLTAGVTAFLRKPVVPHELHLELLHALGVAPPAPSRPGAIEGTVAPDPSSSHATAPS
                     IRVLVVDDNAVNQRVAARMLAKEGCRVDGAADGQEAVDLASRLPYDLILMDCMMPRMD
                     GYEATAAIRKLPTPAGKVPVIAMTANALQGERERCLAAGMDDYVTKPVRPEELHAVI"
BASE COUNT          210 a          481 c          464 g          192 t
ORIGIN      
        1 ttctccaaga tcgaggccgg caagctggtg ctggagaaca ccactttcga tctccaccgg
       61 gtggcctacg atgtggtcga gctgctccag ccgaaggccc gggagaaaca ggtcgagctg
      121 atcgtccggc tcgcaccgga cctgccgagc cggctgatcg gggacgaggg acgggtgcgg
      181 caggtgctcc tcaacctggt ggggaacgcg gtgaagttca ccgaggccgg ccacgtgcgg
      241 ctggcggtgc ggcgcgatga ccatcccgac caggtgcgct tcgaggtgga ggacaccggt
      301 gtcggcatcc cgctcgacaa gcaggaggcg atcttcgaca agttcaccca ggccgacgcc
      361 tcgaccaccc gccgcttcgg cggcaccgga ctcggcctgg cgatctgccg ccagctggtg
      421 acactgatgg gcggagagat cggagtgacc agcgtgcccg gccagggcag caccttctgg
      481 ttcgtcctgc cgctgccggc gcatggcggc ccattggcct cccagcttcc ccagctgccg
      541 cagggcacca gggtcctggt ggtagacgac gtcgccgtgg tgcaggagct gatgaccgag
      601 atggtcggcc gcatgggcgc gctggtggat caggccggcg acggcctggc cgcgctggcg
      661 gcgctccggc gggctgcgcg caaccacccc tatgacgccg tcctgctcga cctggctctc
      721 cccgacatgg acgggctcgc catcgcgcag gcagtggcgg ccgatccgga tatcgccggc
      781 acccccatca tcgcgttcag cggcgccaac tcccgccccc gcgacagtga gctcctgacc
      841 gccggcgtga cggccttcct ccgcaagccc gtggtcccgc acgagctcca tctcgagctc
      901 ctgcacgccc tcggtgtcgc gccgcccgca ccctctcgcc ccggagccat cgagggcacg
      961 gtcgcccccg atccctcgtc atcccacgcg acggccccga gcatcagggt gctcgtggtc
     1021 gacgacaatg cggtcaatca gcgggtcgcc gcccggatgc tggcgaagga agggtgccgg
     1081 gtggacggcg cggcagacgg ccaggaagcg gtcgacctgg cgagccggct tccctacgac
     1141 ctgatcctga tggactgcat gatgccgcgg atggacggct acgaagccac cgccgcgatc
     1201 cggaagctcc cgactccggc gggcaaggtc ccggtaatcg cgatgaccgc caacgcgctc
     1261 cagggcgagc gggaacgctg cctcgcggcg ggcatggatg actacgtcac caagccggtg
     1321 cggcccgaag aactccacgc ggtcatc
//
LOCUS       DATIFF010000483         2121 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_831682, whole genome shotgun sequence.
ACCESSION   DATIFF010000483 DATIFF010000000
VERSION     DATIFF010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2121
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_831682"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..>2121
                     /locus_tag="VLD58_07210"
     CDS             30..>2121
                     /locus_tag="VLD58_07210"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSB54127.1"
                     /translation="MLHILIARAMELVGAASATVYLWEPAQDRLVPAAWRGVGDWQGT
                     IQLRLGEAVAGTAAQTRRTLVVQDYRTSPYVHPRTLEHTTLTASLGEPLLYRDTLIGA
                     ITLGNEGDHTFTEADQEVLRHFAAQAAIAIQNARLYESAQRELRQREAAEVTLQHYAS
                     QLEALRATTADITRELDPAKLLALVIERAVSLLHGVSGAVYLVDPATRDISPQAWVGH
                     GEWLAAVRLRPGDGLAGAVVERGQGVIENSYRTSIYAVPPFLERTRHTAALGEPLYYR
                     DRVIGAILVDRIAEPFTEQDRDLLRLFADQAAIAIEHARLYTDLRRSYEELHRAQGEL
                     VRSEKLRGLGQMAAGIAHDLNNMLAAVLGQAELLRLRTRDPAAREGLQILQTAAADGA
                     EVVRRLQDFAQQRSGGPLQACDLTQLVPEALEITRPRWRDEPRRKGIRIDPIVELVGL
                     PLIIGNPAEIREVLTNLVYNAVDAMPQGGALRIAGRALAMTEDNAAARSSGRPAAAGD
                     GTSAPPPAWVELTVADTGIGIPDDILGRIFDPFFTTKGLHGTGLGLSVVYGILERHGG
                     RIDVASIPGQGTSFRLRFRAAPADAAPGAPQPTPALVPARRILLADDDAPVRHTLAGL
                     LRASGQEVFEAASGAEAIERIRTAGVDLVFTDLGMPEITGWDVARAAKAHRPDLPVVL
                     LTGWGDNVAAEAPSG"
BASE COUNT          338 a          769 c          700 g          314 t
ORIGIN      
        1 agatcacccg agaattagac ttaagccggt tgctccacat cctgatcgcg cgggccatgg
       61 agctggtcgg ggcggcgtcg gccacggtct acctctggga gccggcacag gatcggctcg
      121 tcccggccgc ctggcgagga gtcggggatt ggcagggtac gatccagctc cgcctgggcg
      181 aagccgtggc cggcaccgcg gcccagaccc gccgtaccct ggtcgtccaa gactaccgga
      241 cctccccgta cgtgcacccg cgcacgctcg agcacaccac gctgaccgca tccctcgggg
      301 agccactgct ctaccgagac acgctcatcg gggccatcac gctagggaac gagggagacc
      361 acaccttcac ggaggcggat caggaggtcc tccggcactt cgcggctcaa gcggccatcg
      421 ccatccagaa cgcccgcctg tacgaatcgg cgcagcgcga actgcgccaa cgcgaggccg
      481 cagaggtgac gctgcagcac tacgcaagcc agctcgaagc cctccgggcc accactgcgg
      541 acatcacacg agaactcgat cccgccaagc tccttgcgct ggtcatcgag cgcgccgtga
      601 gccttctcca cggcgtctcc ggcgcggttt acctcgtcga cccggcgacc cgggacatct
      661 ccccgcaggc ttgggtcggt cacggagagt ggctggctgc ggtccggctc cggcccggcg
      721 atggtctcgc cggcgcggtc gtcgagcgcg gtcagggcgt catcgaaaat tcctaccgca
      781 cgtcgatcta tgccgttccc cccttcctcg aacgcacccg ccacacggcc gcgcttggtg
      841 agccactcta ttaccgcgat cgcgtcatcg gcgccatcct ggtcgatcgc atcgcggaac
      901 ccttcacgga acaggaccgt gatcttctcc gcctctttgc cgatcaggcg gctatcgcca
      961 tcgagcacgc gcggctctat accgacctca gacgctctta cgaggaattg catcgcgcgc
     1021 aaggcgagct agttcggagc gagaagctcc gggggctcgg tcagatggcc gcaggaatcg
     1081 cgcacgacct gaacaacatg ctggccgccg tgctcgggca ggcggagttg ctccgcctgc
     1141 gcacccggga ccctgcggcc cgggaaggcc tgcagatcct acagacggcg gcggccgacg
     1201 gggcggaagt ggtccggcgc ctccaggact tcgcgcagca gcggagcggc ggccccttgc
     1261 aggcctgcga tctgacgcaa ctggttcccg aggcgctgga gatcactcgg cctcgctggc
     1321 gggacgaacc ccgtcggaag ggcatccgca tcgacccgat cgtggagctg gtcggacttc
     1381 cgttgatcat tggcaaccca gccgaaatcc gggaggtcct tacgaatctc gtctacaacg
     1441 cggtcgacgc gatgccgcag ggaggggcgc tccgcatcgc aggacgggcg ctggcgatga
     1501 cagaggataa cgcggctgcc cggtcctccg ggcgtccagc cgccgccggc gacggcacct
     1561 ccgcaccgcc gccggcgtgg gtcgagctca ccgtggcgga cacagggatc ggcatacccg
     1621 acgacatcct tgggcggatc ttcgacccgt tcttcacgac caagggcctc cacggcaccg
     1681 gtctcggtct gtccgtggtg tacgggatcc tggagcggca cggcggccgg atcgacgtgg
     1741 cgtcgatccc gggccaaggg acctcttttc gactccggtt ccgcgccgct ccggcggacg
     1801 ccgcccccgg cgcgccgcag ccgaccccgg ctctagttcc agcccgccgc atcttgctcg
     1861 cggacgacga cgccccggtc cggcacacct tggctggcct cctccgggcc agcggccagg
     1921 aggtcttcga agcggccagc ggggcggaag ccatcgagcg gatccgaacc gccggggtgg
     1981 acctggtgtt caccgacctt gggatgcccg agatcaccgg gtgggacgtg gcgcgagccg
     2041 ccaaggccca ccggcccgac ctccctgtgg tcctcctcac cgggtggggc gacaatgtcg
     2101 ccgcggaggc cccctcggga g
//
LOCUS       DATIFF010000484         7259 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_217849, whole genome shotgun sequence.
ACCESSION   DATIFF010000484 DATIFF010000000
VERSION     DATIFF010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7259
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217849"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1033
                     /locus_tag="VLD58_07215"
     CDS             <1..1033
                     /locus_tag="VLD58_07215"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HSB54128.1"
                     /translation="VAPAAPAPAPAAAPRSVADSTGSNGPETAEERLRRRSTPLVRKM
                     AAEHGIDITSVQGSGIAGRVTKNDLLGFIETGAPAAAPASPAAPVRSAPMPAAASAPS
                     HGPAVEAWPGDRVEPWSRIRRLTAEHMVMSRRVSAHVQTLFEIDYTRVSQIRAKKKKE
                     FAERGVNLTYLAFIARAIAQNLRKHPGLNAAVTNDATIFRRDVNLGIAVALDWGLIVP
                     VVKNADELSLMGIARAINDLGERARAKKLNPDEVQRGTFTITNPGVFGSYAGLPIINQ
                     PQVAILGVGTIEKRAAVVTLPDGTDTIAPRLKGMLTMSFDHRVVDGADADRFLADVKK
                     TLEQFPDEG"
     gene            1037..1387
                     /locus_tag="VLD58_07220"
     CDS             1037..1387
                     /locus_tag="VLD58_07220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54129.1"
                     /translation="MTRVLTVSRVTVLPEFEVEYISTVHALAEIGRSRGQHIWLFKSG
                     RVPHTYLEFSESRSEMSHRSRASRTDMEMRLERRLHVIAQYGEGGMELWEEVEPPEPR
                     PSSGWEPENEDEES"
     gene            1434..1694
                     /locus_tag="VLD58_07225"
     CDS             1434..1694
                     /locus_tag="VLD58_07225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54130.1"
                     /translation="MPARQFDIDGSTWEVAPTGRVTQYTRDEFGVIFRRQDGAEVRVA
                     RYAPLGSRQAEDSLAQLSDRELRELWTRSQPAWTAPETGYGR"
     gene            1694..2542
                     /locus_tag="VLD58_07230"
     CDS             1694..2542
                     /locus_tag="VLD58_07230"
                     /inference="COORDINATES: protein motif:HMM:NF014826.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HSB54131.1"
                     /translation="MPFVDLHLHSTASDGAFPPGEVVTRAAAAGLAAMALTDHDTLDG
                     LPAALAAGERLGIRVIAGCEFSVTAPWGEMHVLGFFLPVGWEPLERFLVRCRSDRERR
                     GGEIVDRLNRLGIGLRLEDVLEQSQGGAVGRPHVARALVQRGLVRSVQDAFDRYIGWN
                     RPAFVEKRLPSFTQVAELVHAAGGVLSAAHLRDRGTRSALATLQTQGLDAVETRHPVH
                     DPDQRARLSDLAQQLGLLRSGGSDWHGDDPDLPPAGQIGGQQVPIEWLHQLEGARPTP
                     REFAAS"
     gene            2597..3322
                     /locus_tag="VLD58_07235"
     CDS             2597..3322
                     /locus_tag="VLD58_07235"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSB54132.1"
                     /translation="MPLTWNFADKTLLVTGVGRAGQIGHAVAQALGQAGARIVAVDRN
                     AVGVADRVKEFSAMGIQARPAAGDLTEPDVAAIAIETALRHFGGLDGVINVAGGLTTY
                     GPVEKIAAEDLDRELNINLKTAYLMTRAAIGPLSKNGGSVVNFASVAYYRASGQMAAY
                     SAAKAGVAAMTQSLAVDLWEKRIRVNAVAPGMVRTPENVASAGPGAHYVEMDQIVNAV
                     LFLASDAASGITGHILPVTNGVS"
     gene            3325..4053
                     /locus_tag="VLD58_07240"
     CDS             3325..4053
                     /locus_tag="VLD58_07240"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSB54133.1"
                     /translation="MELASRVALVTGGGRRVGQALALALARQGMHLAIHYNSSAEGAR
                     TTQVQAQALGVQAELFQADLEDPSSAKALPAEVARRFGRLDVLVNSAGIMPQATVEET
                     TPELWDQTMAVNLKSHFFTVQGALPYLRQAKGKIVNLADVGGLEPWPRYTAHCVSKAG
                     VVMLTKTLALALAPDITVNAIAPGAVLPPDEWSDAAREHLARTTPLKRLGSAEDVAGA
                     LVYLLQADYVTGEVLVVDGGRLIR"
     gene            4181..4921
                     /locus_tag="VLD58_07245"
     CDS             4181..4921
                     /locus_tag="VLD58_07245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54134.1"
                     /translation="MSEITLGEVVIVGGGCYGTFYARQLLQARDRGKASFARLLIVDH
                     NPTCQFSRELGDTPEHTLVVEDWDRFFDRYLTPREAGDRLPDVIVPSPLMPHLMYQWL
                     LRQARRRWPGRGVETRPFPAGPGTPYDQSAPDGTRYVSFADWLCPTHCIEPALCPVTR
                     APRTWEMADAVTDLTRRLGETRSVAGPVIFHCEHLVFGVGTFPVTQVLAGAACLCEAG
                     EAGTAVDIPVATLSSCHGALNLIHLEPR"
     gene            4993..5946
                     /gene="trxB"
                     /locus_tag="VLD58_07250"
     CDS             4993..5946
                     /gene="trxB"
                     /locus_tag="VLD58_07250"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HSB54135.1"
                     /translation="MHELDTIIIGGGPAGLCAGMYAGRGMLKNIILESKVPGGELLNT
                     EKIEDYPGFESILGRDLAEKMTSHAKKFGAEIRQATVEGIHRLDDGTFEVRTIEGDTY
                     HAPTVILTAGGTPTKLGVPGELEYAGFGVSYCAVCDGAFFRNQIIAVIGGGDAAVEEA
                     DYLTRYASKVYLIHRRDELRASKILQERLFANPKIEVIWNKKVLELKGREHLGMKELQ
                     SLILEDTVTGASSELAVSGCFVFIGFKPNSGLIKEHFRHDPSGYIITDDRMMTSIPGL
                     FAAGDLRVQLVRQVTTAVGDATTAAIAVEKYLAERRSKVGV"
     gene            5939..6589
                     /locus_tag="VLD58_07255"
     CDS             5939..6589
                     /locus_tag="VLD58_07255"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSB54136.1"
                     /translation="MSELEIVALPNGQFAENCYLLADRVTRHAVMIDPGEEPRLFLAE
                     LDTRGWALSAIWLTHGHIDHILGVKAVKDATGVPVYLHPADRALYDHLPRQAELWLGE
                     QVEPPPAPDEALSDGQRLLLGNHEFTVRHTPGHSPGSVSFVGSGCVFGGDVLFNGSVG
                     RTDLPGGDLGTLMHSLHSVFMALPDSTIVYSGHGPETTIGVERMTNPFLTGAYHHE"
     gene            6760..>7259
                     /locus_tag="VLD58_07260"
     CDS             6760..>7259
                     /locus_tag="VLD58_07260"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB54137.1"
                     /translation="MTAPTEPAAPAVPGFLAPPRTPLNLASLAFPPALRAPGTLTVLD
                     ITKYFGDATGGIRTYLLSKAAYVQSQASLRQVLVVPGEADGLGEERGVRCYRLRGPRI
                     PFDKSYRFLLATRTTRRILEHERPDLIEVGSPWFVPWVTRRANRHLAAPMVWFYHTHF
                     PAIINSG"
BASE COUNT         1140 a         2578 c         2365 g         1176 t
ORIGIN      
        1 cgtggccccg gctgcgcccg ctcccgcccc ggcggccgcg ccccgcagcg tcgccgactc
       61 caccggctcc aacggccccg agaccgccga agagcggctt cgccgccgct ctacgccgct
      121 ggtccggaag atggccgccg agcacgggat cgacattacc tcggtgcagg ggagcgggat
      181 cgccggccgg gtgaccaaga acgatctgct cgggttcatc gagaccggtg cgcccgccgc
      241 cgcgccggca tcacccgctg ccccggtccg gtccgctccg atgccggccg ccgcgtccgc
      301 gccctcgcac gggccggccg tcgaggcctg gccgggcgac cgggtagagc cctggtcccg
      361 gattcgccgc ctcaccgccg aacacatggt gatgtcgcgc cgggtgtcgg cccacgtgca
      421 gaccctgttc gagatcgact acacccgcgt ctcgcagatc cgcgcgaaga agaagaagga
      481 attcgccgag cggggcgtga acctcaccta cctcgcgttc attgcccgag ccatcgcgca
      541 gaacctgcgg aagcatccgg ggctcaatgc cgccgtcacc aacgatgcga ccatcttccg
      601 gcgcgatgtc aatctcggca tcgcggtggc gctcgactgg ggtctgatcg tcccggtggt
      661 gaagaacgcc gatgagctct cgctgatggg gatcgcccgc gcgatcaacg acctgggcga
      721 gcgggcccgg gccaagaagc tcaatccgga cgaggtgcag cgggggacct tcaccatcac
      781 caacccgggc gtcttcggct cctacgccgg gctccccatc atcaatcagc cgcaggtggc
      841 cattctcggt gtcggcacga tcgagaagcg ggccgcggtg gtcaccctcc ccgacggcac
      901 cgataccatc gcgcctcggc tcaaggggat gctgacgatg tcgttcgacc accgggtggt
      961 ggacggcgcc gatgccgacc gcttcctggc cgacgtcaag aagaccctgg aacagttccc
     1021 tgacgagggc tgacccatga cccgggtgct caccgtatcc cgcgtgacgg tgctgccgga
     1081 attcgaagtc gagtacatca gcaccgtgca cgccctcgcc gagatcggcc ggtcgcgcgg
     1141 gcagcatatc tggctgttca agagcggcag ggtgccgcac acctatctcg agttcagtga
     1201 gagccgttcc gagatgtcgc accggagccg ggcctcgcgg accgacatgg aaatgcggct
     1261 ggagcggcgg ctgcacgtga tcgcccagta tggcgagggc ggcatggagc tgtgggagga
     1321 agtggagccg cccgagccgc gcccctcctc cggctgggaa ccggaaaacg aggatgagga
     1381 gtcgtaactt ctcccctctc ccttctcact tcctacttct cacttctcac tccatgcccg
     1441 cacgccagtt cgacatcgat ggcagcacct gggaagttgc ccccaccggc cgcgtcaccc
     1501 agtacacccg cgatgaattc ggcgtgatct tccgccgcca ggacggcgcc gaggtgcgcg
     1561 tcgcccgcta tgccccactc gggtcccgcc aggccgagga ttcgctcgcc cagctctccg
     1621 atcgtgagct tcgtgagctg tggacccgct cccagccggc ctggaccgcg ccagagactg
     1681 gctacggacg ctgatgcctt ttgtcgatct gcatctccat tccaccgcct ccgacggcgc
     1741 ctttccgccc ggggaggtgg taacccgggc cgcggccgcc gggctcgccg ccatggccct
     1801 caccgaccac gataccctcg atggacttcc cgccgcgctc gcggccggcg aacgcctggg
     1861 tatccgcgtg atcgcgggct gcgagttctc ggtgactgcc ccgtggggcg agatgcatgt
     1921 gctcggcttc ttcctgccgg tggggtggga accgctcgaa cgtttcctgg tccgctgtcg
     1981 gtccgatcgc gagcggcgcg gcggcgaaat tgtcgaccgg ctcaaccggc tcggcatcgg
     2041 cctccggctg gaagatgtgc tggagcagtc gcagggtggg gcggtgggcc ggccccatgt
     2101 ggcccgcgcg ctggtgcagc gtggcctcgt gaggtcggtg caggatgcct tcgatcgcta
     2161 catcggctgg aaccgcccgg cgttcgtcga gaagcggctg ccatcgttca cccaggtcgc
     2221 cgaactggtg cacgcggccg gcggggttct ctccgcggcc catctgcgtg accggggaac
     2281 ccgatcggcc cttgcgacac ttcagaccca ggggctcgat gcggtcgaga cgcgccaccc
     2341 ggtgcatgat cccgaccagc gtgcccgcct gagcgacctt gcccagcagc tcggcctgct
     2401 gcggagcggc ggctccgact ggcatggcga cgatcccgat cttccgcccg cggggcagat
     2461 cggcggacag caggtgccga tcgagtggct gcaccagctc gaaggcgcgc gcccgacccc
     2521 cagggaattc gccgcgagct gatcgccggt tgccgactcc cgacccccga ccacagaccc
     2581 cgacccccga ccaacaatgc ccctgacctg gaactttgcc gacaagacgc tgctcgtgac
     2641 tggggtgggt cgtgccggac agatcggcca tgccgtcgcg caggcgctgg gacaggcggg
     2701 cgcccggatc gtcgcggtcg accgcaacgc cgttggtgtg gccgaccggg tgaaggaatt
     2761 ctcggcaatg ggaatccagg ccaggcctgc ggccggcgat ctgaccgagc ccgacgtggc
     2821 cgcgatcgcc atcgagacgg cgctcaggca ctttggcgga ctcgatgggg tcatcaacgt
     2881 ggcgggcggc ctcaccacct acgggccggt ggagaagatc gccgccgagg atctggaccg
     2941 cgaactcaat atcaatctca agaccgccta cctgatgacc cgggccgcca tcggtccgct
     3001 ctccaagaac ggcggttccg tggtcaactt cgcctcggtt gcgtactacc gcgccagtgg
     3061 tcaaatggcg gcgtacagcg cggccaaggc gggcgtcgcc gccatgaccc agagcctggc
     3121 ggtggatctg tgggagaagc ggatccgggt gaatgccgtg gcgcccggca tggtgcgcac
     3181 tccggagaat gtggccagcg ccggccccgg ggcccactac gtcgagatgg accagatcgt
     3241 caacgcggtt ctcttcctcg cgagcgatgc cgcttccggc atcaccggac atattctgcc
     3301 ggtcaccaac ggcgtgagct gagcatggag ctggcgtccc gggttgcgct ggtcaccggc
     3361 gggggacgcc gggtcgggca ggcgctggcg ctggcgctcg cgcggcaggg gatgcacctc
     3421 gccatccatt acaacagttc ggccgaggga gcccggacta cccaggtgca ggcccaggcg
     3481 ctcggcgtcc aggccgagct cttccaggcc gatctggaag acccgtcctc ggccaaggcc
     3541 cttcccgccg aagtcgcccg ccggttcggc cggctcgatg tgctggtcaa ttcggccggg
     3601 atcatgccgc aggccactgt cgaggagacc acgcccgagc tgtgggacca gacgatggcg
     3661 gtgaacctca agtcgcactt cttcaccgtg cagggcgcgc tcccgtatct gcgccaggcc
     3721 aagggcaaga tcgtcaacct cgccgacgtc ggcgggctcg aaccctggcc ccgctacacc
     3781 gcccactgcg tcagcaaggc cggggtagtg atgcttacca agacgctcgc tctcgccctg
     3841 gcccccgaca tcacggtgaa cgcgatcgct cccggtgcgg ttctgccacc ggatgaatgg
     3901 agcgatgcgg cccgcgaaca cctggccagg accaccccgc tcaagcggct cggttcggcg
     3961 gaggatgtgg ccggtgcgct ggtgtacctg ctccaggcgg actacgtgac gggtgaggtg
     4021 ctggtggtgg acgggggccg gctgatccgt tgaactcgcc atgccggaac ccaggaggca
     4081 gccgatcccc gcgtcaggtc ctggtcgctg agggctccgc cccccatagg gggaatatca
     4141 gccccactcg ccaccgcgcc ggcatcaagg cgacgcgggc atgagcgaga taacgctggg
     4201 cgaagtcgtc atcgtcggcg gcggatgcta cggcaccttc tacgcccgcc agctgctcca
     4261 ggcccgcgac cgcggcaagg cctcctttgc ccgcctcctg atcgtcgatc acaatcccac
     4321 ctgccagttc tcccgtgaac tgggcgacac ccctgagcac accctcgtcg tcgaggactg
     4381 ggaccgtttc ttcgaccgct acctgacgcc cagggaagcc ggcgaccggc tacccgacgt
     4441 gatcgtcccc tcgccgctca tgccccatct catgtaccaa tggctgctcc gccaggcccg
     4501 gcggcgctgg cctggccggg gcgtcgagac ccgcccattt cccgcgggac ccggtacacc
     4561 ctatgaccag tccgcgcctg acggcacccg gtacgtttcc tttgccgact ggctgtgtcc
     4621 cacccactgc atcgagcctg ccctctgtcc agtcacccgg gcgccccgta cctgggaaat
     4681 ggccgacgcc gtgaccgatc tcacccgccg cctcggcgag acccgttccg tggccgggcc
     4741 ggtcatcttc cactgtgagc acctggtctt cggggtgggc acctttccgg tgacgcaggt
     4801 cctcgccggg gcggcctgcc tgtgcgaggc tggagaggct ggaacggcag tggacatccc
     4861 ggtcgccacc ctctcctcct gtcacggggc gctcaacctg atccatctgg aaccccggtg
     4921 agcgggcggg ggttaccgac cggtctatat ttactgagtt agccattacc tggtccctag
     4981 ccaccagcca acatgcacga gctcgatacc atcatcatcg gcggcggccc cgccggtctc
     5041 tgcgccggga tgtacgccgg ccgcgggatg ctcaagaaca tcatcctcga gagcaaggtc
     5101 ccgggcggcg aattgctcaa caccgagaag atcgaggact accccggctt cgagtcgatc
     5161 ctcggccgcg acctggccga gaagatgacg tcgcatgcga agaagttcgg cgccgagatc
     5221 cggcaggcca cggtggaggg catccaccgc ctggacgacg ggaccttcga ggtccgcacc
     5281 atcgagggcg acacctacca cgccccgacc gtgatcctca ccgccggcgg gacccccacc
     5341 aagctcggcg tgcccggcga gctcgagtac gccggcttcg gcgtctcgta ttgcgcggtc
     5401 tgcgacggcg ccttcttccg caatcagatc atcgcggtga tcggcggcgg cgacgcggcg
     5461 gtggaggagg ccgactacct cacccgctat gcttccaagg tgtatctcat tcaccggcgc
     5521 gatgagcttc gggcctcgaa gattctccag gagcggctct tcgccaatcc caagatcgag
     5581 gtcatctgga acaagaaggt cctcgagctc aaggggcggg agcatctggg gatgaaggaa
     5641 ctccagtcgc tcatcctgga agacaccgtg acgggcgcct ccagcgaact ggcggtcagc
     5701 ggttgcttcg tgttcatcgg gttcaagccc aactcggggc tgatcaagga gcatttccgc
     5761 cacgatccga gcggttacat cattaccgac gatcggatga tgacctcgat ccccggtctc
     5821 ttcgccgctg gcgatcttcg ggtgcagctg gtcaggcagg tgacgactgc ggtcggcgac
     5881 gcgacgacgg cggccatcgc ggtggagaag tatctcgccg aacggcggag caaagtcggt
     5941 gtctgagctc gagatcgtcg cccttccgaa tggccagttc gccgagaatt gctacctcct
     6001 ggcggaccgg gtcacccggc atgcggtcat gatcgatccg ggcgaggaac cccggctctt
     6061 tctggccgaa ctcgacactc ggggctgggc cctctccgcg atctggctca cccacggaca
     6121 tatcgaccat atcctgggcg tgaaggcggt gaaggacgcc accggcgtcc cggtctacct
     6181 gcatcccgcc gaccgcgcgc tctacgacca cctgccacgc caggcggagc tctggctggg
     6241 cgagcaggtc gagccgccgc ctgcgcccga tgaggcgctg agtgacggcc agcgcctcct
     6301 gctcgggaac cacgagttca cggtgcggca cacgcccggg cattcaccgg gatcggtcag
     6361 cttcgtgggg agcggctgcg tcttcggcgg ggatgtgctc ttcaacgggt cggtggggcg
     6421 caccgacctg cccggcggcg acctcgggac cctgatgcac agcctccatt cggtgttcat
     6481 ggcgctgccc gattcgacga tcgtctacag tgggcacggg ccggagacga cgatcggggt
     6541 ggagcggatg accaatccat tcctgacggg ggcgtaccac catgagtgag gcggccgagc
     6601 ggtcggtcgg ccacgcggca gacaggtccg gccacactgg ccgccttgcc gatttgccgc
     6661 ccggccgcct cgaatgcaac cgctgcggtt tccccgtgcg ctccaaaccg tggggctgca
     6721 agaacccctg cgccaactgc ggcacggtct acccgctcgg tgactgctcc gactgaaccg
     6781 gccgccccgg cggtcccagg attcctggca ccgccccgga cgccgctcaa cctcgccagc
     6841 ctggcctttc cgccggccct ccgggcgccc ggcacgctca ccgtgctgga tatcaccaag
     6901 tatttcggcg acgccaccgg cggcatccgc acctacctgc tgtccaaggc cgcctatgta
     6961 cagagccagg cctcgctccg ccaggtgctg gtggtgcccg gcgaagccga cggcctgggc
     7021 gaagagcgtg gggtccgctg ctatcgtctt cgtggtcccc ggattccgtt cgacaagtcc
     7081 tatcgctttc tcctggccac ccgcaccacc cgacgaatcc tcgagcatga gcggcccgac
     7141 ctgatcgagg tcgggagccc ctggttcgtt ccctgggtta cccggcgtgc caaccggcac
     7201 ctcgccgctc cgatggtctg gttctatcac acccactttc ccgcgatcat caattccgg
//
LOCUS       DATIFF010000485         1319 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2216692, whole genome shotgun sequence.
ACCESSION   DATIFF010000485 DATIFF010000000
VERSION     DATIFF010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1319
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2216692"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1319
                     /locus_tag="VLD58_07265"
     CDS             <1..>1319
                     /locus_tag="VLD58_07265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54138.1"
                     /translation="LRGGWTGRPELPGYQAHGARSVEYLLDGIPYEPVGQDSLAVDPS
                     MLPLSFIDRIEIERLPGLLRVFLFTRHHDRSVPYTRIGIASGDLQFARYQAVLEKRNA
                     KGLGFGAAFDHLSVPAQPSTPGDYSNTQGWLRLDYIPRAGRGVEVQLFTSAPDRQVVL
                     SEGTTGDTISNPRHGSRRDLTARVFLARRPDGLGPRFDLFLSHTGYTDRIEKDTVLTL
                     SPPDTVISGDGKDTTITVDTTRDLRDHQRSFTQAGAAFAWRRPDASLEANLFWRSTWT
                     PLDVRVRAGVAPGRFLSASLEGAYLSHDGSRTSSWLTARAGARLPLGIMATGIWRRGS
                     AVTAPAILADSAERVDDRSLGLAWRGGFAQAEVTYSWNAAFAPLAWGQYPGIRSIAPS
                     HRTEWLSVNARIAPRQWMMLDGWYSTPQGARPEGQPPTHSIINGTIQ"
BASE COUNT          207 a          472 c          453 g          187 t
ORIGIN      
        1 cctgcgcggc ggctggaccg gccggcccga gctccccggg taccaggcgc acggggcgcg
       61 atcggtggag tacctgctgg acgggatccc gtacgagccg gtcgggcagg acagcctcgc
      121 cgtcgatccc tcgatgctcc cgctcagttt catcgaccgg atcgagatcg agcggcttcc
      181 cgggctcctc cgggtctttc tcttcacccg gcaccacgac cggagcgtgc cgtacacccg
      241 catcggcatc gcgagcggcg acctgcagtt cgcccggtac caggcggtgc tcgaaaagcg
      301 gaacgcgaaa ggactgggct tcggcgccgc cttcgaccat ctgagcgtcc ccgcgcagcc
      361 cagcaccccg ggcgactatt cgaacaccca gggatggctc cgcctcgact acatcccgag
      421 ggcggggcgt ggagtggagg tgcagctgtt caccagcgcg ccggaccgcc aggtggtact
      481 gagcgaaggg acgaccggcg acaccatcag caatccgagg catggcagcc gccgggacct
      541 cacggcacgg gtcttcctcg cccggcggcc ggatggactg gggccacggt tcgatctctt
      601 cctgagccat accggataca ccgaccggat cgagaaagac accgtcctga ccctgtcccc
      661 gccggacacg gtgatctccg gcgacgggaa ggacaccacc atcacggtgg atacgacgcg
      721 cgacctgcgc gatcaccaac ggtcgtttac ccaggccggt gccgcgttcg cctggcggcg
      781 acccgacgcg agcctcgaag cgaatctctt ctggcgctcg acctggaccc cgctcgacgt
      841 tcgggtccgg gccggcgtcg ccccgggccg gttcctttcg gcgagcctcg agggtgcgta
      901 cctgtcgcat gacgggagcc ggaccagcag ctggctgaca gcccgggcgg gcgcccgtct
      961 gcccctgggg atcatggcga cgggcatctg gaggcgaggg tccgccgtca cggcgccggc
     1021 gatcctggcg gacagcgcgg aacgggtgga tgaccgcagc cttggcctgg cctggcgggg
     1081 cgggtttgcc caggcggagg tcacctacag ctggaatgcg gccttcgcgc ccctcgcgtg
     1141 gggccagtac cccgggatca ggtcgattgc cccctcccac cgcaccgagt ggctcagcgt
     1201 gaacgcgcgg atcgctccga gacagtggat gatgctcgat ggctggtaca gcaccccgca
     1261 gggcgcccgg cccgagggcc agccgccgac ccactcgatc atcaacggga cgatccaga
//
LOCUS       DATIFF010000486         3655 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2216718, whole genome shotgun sequence.
ACCESSION   DATIFF010000486 DATIFF010000000
VERSION     DATIFF010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3655
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2216718"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1146)
                     /locus_tag="VLD58_07270"
     CDS             complement(<1..1146)
                     /locus_tag="VLD58_07270"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HSB54139.1"
                     /translation="MPDTHFDVIIIGSGAGGGTLAYRLAPSGKRVLLLERGDYVPREK
                     DNWSTRAVNLEGKYQTREKWRNREGKELHPHTNYWVGGNTKFYGAALFRMREQDFGEL
                     RHHGGTSPAWPIGYDELEPYYTEAEHLYQVHGERGVDPTEPRASAPYRYPAVSHEPRI
                     QQLSDDWTRLGYRPFHVPLGVMLDEANPRQSRCIRCETCDGHPCLVGAKSDAQVVCVD
                     PALRHPNVTLLTGAYVTRLETSASGREVTGVQVERAGARERYTADIVVVSCGAINSAA
                     LLLRSANDSHPRGLANGSDVVGRHYMGHINSVLMALSRCPNPTVFQKSLALNDFYFGS
                     KEWDYPMGHISFVGKLDGVTLSAGAPAIAPGWTLDLMGKHSLDFWLTS"
     gene            complement(1256..1993)
                     /locus_tag="VLD58_07275"
     CDS             complement(1256..1993)
                     /locus_tag="VLD58_07275"
                     /inference="COORDINATES: protein motif:HMM:NF038123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spondin domain-containing protein"
                     /protein_id="HSB54140.1"
                     /translation="MSIVRAISLSAAALALAHGAMAQGAPAATKFTIRVENITKGEVL
                     KLSNGKRAPFVSAPVLWAVHTGSANPLFTGGKPDAGKGLETLAETGNPARLAGAIRSA
                     EGVVASGAAAHPIGASADGPLTPGQAYEFEISAEPGQALSMAWMFGQSNDLFYSNDRP
                     IALFDAAGKPVTGDMTAQLSLWDAGTEVNEEPGLGPNQGPRQASPDAGTAEHEAIAHV
                     RDKYQYPRVAEVLRLTITPAGSAVSSM"
     gene            complement(2006..2512)
                     /locus_tag="VLD58_07280"
     CDS             complement(2006..2512)
                     /locus_tag="VLD58_07280"
                     /inference="COORDINATES: protein motif:HMM:NF021996.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DM13 domain-containing protein"
                     /protein_id="HSB54141.1"
                     /translation="MRRRTWIIALVVAGAVGWYLFRPELLFVKTRVNESLPGENVAAA
                     SEVASADKAAPAVLLTGQFHSVHHETRGTATVHQVGDSRVLRFTGFSTSNGPDVRVYL
                     VAATDASDNETVEKAGFVELGKLKGTEGDQNYEIPAGLDLTKYRAVTIWCYRFNVNFA
                     TAPLTPAS"
     gene            complement(2598..3413)
                     /locus_tag="VLD58_07285"
     CDS             complement(2598..3413)
                     /locus_tag="VLD58_07285"
                     /inference="COORDINATES: protein motif:HMM:NF012455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin"
                     /protein_id="HSB54142.1"
                     /translation="MSTTLERPALPTRRIASHWPEYGMEAALLGLFMISACSFTVILE
                     YPAWPVRQMFPDPILRRLLTGLAMGGTAIALIYSPWGKQSGAHLNPATTLTFLRLGKV
                     ASRDAAAYVGAQFAGSIAGVAVASLVWGGRLADPATNYAATLPGMAGIAAAFAAEVLI
                     TFILMTVILRVSNHQRWAHLTGLCAGLLVATYITLEAPVSGMSMNPARTLGSAAFARN
                     WTGLWIYFLAPPLGMLAAAELYLRGRGPAAVFCAKLHHQNDKRCIFCETRARP"
     gene            complement(3410..>3655)
                     /locus_tag="VLD58_07290"
     CDS             complement(3410..>3655)
                     /locus_tag="VLD58_07290"
                     /inference="COORDINATES: protein motif:HMM:NF017964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HSB54143.1"
                     /translation="RGGGPEVRTEARRRFLEPILHHLTEAGVGHVSEIADADPPDTPR
                     GCPFQAWSVGEALRLERLVLKEAAPAPASRRSPVPAR"
BASE COUNT          544 a         1263 c         1282 g          566 t
ORIGIN      
        1 cgaggtgagc cagaagtcga gcgagtgttt ccccatcagg tcgagggtcc atcccggtgc
       61 gatcgccggc gcccccgccg acagggtcac cccgtcgagc ttgccgacga acgagatgtg
      121 ccccatcggg tagtcccatt ccttgctgcc gaaatagaaa tcgttgaggg ccagcgattt
      181 ctggaatacc gtcgggttgg gacaccggga caacgccatg aggaccgagt tgatgtggcc
      241 catgtagtgg cggcccacca cgtccgaccc gttggccagc ccgcggggat ggctgtcgtt
      301 ggccgaccga agcaggagag ccgccgagtt gatggcgccg caggagacca ccacgatgtc
      361 ggcggtgtag cgctcccggg cgccggcccg ctccacctgc accccggtca cttcgcgtcc
      421 ggacgcgctg gtctccagcc gggtcacgta cgccccggtg agcagggtga cgttgggatg
      481 ccggagcgcg gggtccacgc agaccacctg ggcgtcagac ttggccccga ccaggcaggg
      541 atggccgtcg caggtctcgc agcggatgca gcggctctgc cgcggattcg cctcgtccag
      601 cataacgccg aggggcacgt ggaagggacg gtagcccagc cgggtccagt cgtcgctcag
      661 ctgctggatc ctcggctcgt ggctcaccgc cggataccgg tacggcgcgc tggcgcgggg
      721 ctcggtggga tccacccccc gctcgccgtg cacctgatac aggtgctcgg cctcggtgta
      781 gtacggctcc agctcgtcat agccgatcgg ccaggcgggc gacgtccccc catggtggcg
      841 gagctcgccg aagtcctgct cccgcatccg gaacagcgcg gccccgtaga acttggtatt
      901 gccgccgacc caatagttgg tgtgcgggtg cagctccttc ccttcccggt tgcgccactt
      961 ctcccgggtc tggtatttcc cttccaggtt gactgctcgg gtgctccagt tgtccttctc
     1021 ccgcggcacg tagtcgcccc gctcgaggag gaggacccgc ttgcccgagg gagccagccg
     1081 ataggcgagc gtgccgccgc cggccccgga gccgatgatg atgacgtcga agtgggtgtc
     1141 tggcatgacc ggagcctcgt gaacggagga gaaaggcgaa aggcgaaggg ggaaggagat
     1201 cgaagcgggt agtctgccca tcccccttcg cccttcctct ttcgcccttc ccggcctaca
     1261 tgctgctgac ggccgacccg gccggcgtga tcgtcaacct cagcacttcc gccacgcggg
     1321 ggtactggta cttgtcccga acgtgggcga tcgcctcgtg ctcggccgtg cccgcgtcgg
     1381 gcgaggcctg gcggggaccc tggttggggc ccagccccgg ctcctcgttg acctcggtgc
     1441 cggcgtccca cagcgacagc tgcgccgtca tatccccggt caccggcttg ccggccgcgt
     1501 cgaacagcgc aatcgggcgg tcgttggagt agaacaggtc gttcgactgg ccgaacatcc
     1561 acgccatcga cagcgcctgc cccggctcgg cggagatctc gaactcgtac gcctggcccg
     1621 gcgtcagcgg cccgtcggcg gaggcgccga tcggatgggc ggcggctccc gaggccacga
     1681 caccctccgc ggacctgatc gccccggcga gccgcgcggg attccccgtc tccgccaggg
     1741 tctcgagccc cttgcccgcg tccggcttgc ccccggtgaa gagcgggttg gcggagccgg
     1801 tgtgcaccgc ccagagcacc ggggcggaca cgaagggcgc gcgcttgccg ttcgaaagct
     1861 tcagcacctc acccttggtg atgttctcga cccggatggt gaacttggtg gccgccggag
     1921 ccccctgcgc catcgccccg tgggcgaggg ccagcgcggc ggccgagagc gagattgcgc
     1981 gaacgatcga catggacggc tcctctcagg acgcaggggt gagcggcgcg gtggcgaagt
     2041 tgacgttgaa gcggtagcac cagatcgtca ccgcccggta tttggtcagg tccaggccgg
     2101 cggggatctc gtagttctgg tccccctcgg tgcccttcag cttgcccagc tccacgaagc
     2161 cggccttctc gacggtctcg ttgtcgctcg cgtcggtggc ggcgaccagg tagacccgca
     2221 cgtccgggcc gttggaggtg ctgaacccgg tgaagcgcag cacccggctg tcgcccacct
     2281 ggtgcaccgt cgcggtcccc ctggtctcgt ggtgcaccga gtggaactgg ccggtgagaa
     2341 ggaccgccgg cgcggctttg tcggcgctgg ccacttcgct cgcggccgcg acgttctcgc
     2401 ccgggaggct ctcgttcacc cgggtcttca cgaacagcag ctcaggccgg aacagatacc
     2461 aaccgacggc accggcgacg accaacgcga tgatccaggt acggcgtctc atccttccat
     2521 ctccttgctg ggctgtggct gacggggtgt gacctcgatg gcggctgtaa tgagagggga
     2581 tgggaaaagg ttccagctca cggccgggcg cgggtctcgc agaagatgca gcgcttgtcg
     2641 ttctggtggt gcagcttggc gcagaacacc gcggccggtc cccgcccgcg aaggtacagc
     2701 tcagccgcgg cgagcatccc gagcggcggg gcgaggaagt agatccacag ccccgtccag
     2761 ttccgggcga aggcggccga gccgagggtg cgtgccgggt tcatgctcat ccccgaaacc
     2821 ggcgcttcca gcgtgatgta agtcgccacc aggagtccgg cgcagagccc ggtgagatgg
     2881 gcccaccgct ggtggttcga cacccggagg atgacggtca tcaggatgaa ggtgatcagc
     2941 acctccgcgg cgaaggccgc cgcgatcccg gccatgccgg ggagcgtcgc cgcgtagttg
     3001 gtggccgggt cggcgagccg cccaccccag accagactcg ccacagccac cccggcgatg
     3061 ctcccggcga actgcgcccc cacgtaggcc gccgcgtcgc gggatgccac cttgcccagc
     3121 cggaggaagg tgagcgtcgt agccgggttc aggtgggccc ccgactgctt gccccagggc
     3181 gagtagatca gcgcgatcgc ggtgccgccc atcgccagcc ctgtgagcag gcggcgcagg
     3241 atcggatcgg ggaacatctg gcgcaccggc caggcgggat attccaggat caccgtgaag
     3301 ctgcaggcgg agatcatgaa gagcccgagc agcgccgcct ccatgccgta ttccggccag
     3361 tgggaagcga tccgccgagt gggcaacgcg gggcgttcca gcgtcgtgct caccgggccg
     3421 gcaccggcga ccgccggctg gcgggtgcgg gagcggcctc cttcaggacc agccgctcca
     3481 gccgcagcgc ttcgcccacc gaccaggcct ggaacgggca cccccggggt gtgtccggcg
     3541 ggtcggcgtc ggcgatctcc gagacgtggc cgaccccggc ctcggtcagg tgatggagga
     3601 tcggctcgag aaaccggcgc cgcgcctccg tccgcacctc ggggcccccg ccccg
//
LOCUS       DATIFF010000487         1798 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_524953, whole genome shotgun sequence.
ACCESSION   DATIFF010000487 DATIFF010000000
VERSION     DATIFF010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1798
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_524953"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1752
                     /locus_tag="VLD58_07295"
     CDS             <1..1752
                     /locus_tag="VLD58_07295"
                     /inference="COORDINATES: protein motif:HMM:NF012945.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HSB54144.1"
                     /translation="PQLNVREAAELAYYGAKVLHPRALIPVLGRKVPLLVRPFIDPSS
                     RGTEVSERETGLEVPVKALSGAEGQALITVEGNGMLGVPGVAARTFAALQRERLSVSL
                     ITQASSEHSICLCVPAASAERARACLAEAFREEIAHREIDGVAVRPNVATIAVVGLGM
                     AGTPGVAQRTFSALAGAGINVIAIAQGSSELNISVVVNEAQNREAQRAIHAAFQLGKV
                     GGGSVAPRDRLDVFLLGFGRIGRSLAELVAELPAGGPKVRIVGVADRSGVVFDPAGLS
                     PHQLTAIAREKAKGHSLKHLEHGRADRAEDAVLRALKHALSHPVLVDVTADDTDSVIR
                     AALSHGMDVVLANKLPLAGPASQAEALLALARQHGRQLRYEATVGAGLPVMDTFAKLT
                     ETGDEVLDIEGCLSGTLGFLLSELEAGRKFSQALGAAMDAGFTEPDPREDLSGADVAR
                     KALILGRLLGFKGEPGSVVTESLVPQGAGSLSLKQFLTRLTTWDADWTERMRAARARG
                     QLLRYVATVTQRRLRVGLTAVPATSPFASLHGTDNQIVFTTARYREHPLVIRGPGAGP
                     LVTAAGVMNDVLALARR"
BASE COUNT          270 a          582 c          690 g          256 t
ORIGIN      
        1 ccgcaactca acgtgcgcga ggcggcagag ctggcctatt acggcgccaa ggtgcttcac
       61 ccccgcgcgc tgatcccggt cctggggcgg aaggtcccgc tcctggtgcg gcccttcatc
      121 gatccctcct ctcgcggcac cgaagtgtcg gaacgggaga cgggactgga agtgccggtc
      181 aaggcgcttt ccggcgcgga ggggcaggcg ctgatcacgg tggagggaaa cggaatgctg
      241 ggggtgccgg gcgtagcggc ccggaccttc gcggcgctgc agcgggaacg gctctcggtt
      301 tcgctcatca cccaggcttc gtcggagcat tcgatctgcc tctgcgttcc ggcggcaagc
      361 gcggaacgag cgcgagcctg cctggcggaa gcgttccggg aggagatcgc ccaccgcgag
      421 atcgacgggg tggcggtcag gcccaatgtt gccacgatcg cggtggtcgg cctgggaatg
      481 gccgggaccc cgggcgtggc ccagcggacg ttttcagccc tggccggagc gggaatcaac
      541 gtgatcgcca tcgcccaggg atcgagcgag ctcaacatct cggtggtggt gaacgaggcc
      601 cagaacaggg aggcccagcg ggcaattcac gcggccttcc agctgggcaa ggtggggggc
      661 ggctcggtgg cccctcggga ccggttggac gtcttcctgc tgggcttcgg gaggatcggg
      721 cgcagcctgg ccgagctggt tgccgagctg ccagcgggcg gacccaaggt gcggatcgtg
      781 ggagtggcgg atcggagcgg ggtggtgttc gatccggccg gcctctcccc tcaccagctc
      841 actgcgatcg cccgggagaa ggccaagggc cactcgctca agcacctgga acatggtcgc
      901 gcggaccggg cggaggatgc ggtactgcgg gcgctgaagc acgcgctgtc ccacccggtg
      961 ctggtggacg tgaccgccga cgacactgat tccgtcatcc gcgcggcgct gtctcacggc
     1021 atggacgtgg tgctggcgaa caagctcccc ctcgccggcc cggccagcca ggcggaagcg
     1081 ctgctggcgc tggcgcggca gcatgggcgg caactccgct acgaggccac ggtcggcgcc
     1141 gggctgccgg tgatggacac cttcgcgaag ctcaccgaga ccggcgacga agtactcgac
     1201 atcgaggggt gcctctcggg aaccctcggg ttcctgctct cggagctgga ggcgggccgg
     1261 aagttctccc aggcgctcgg ggcggccatg gacgccggct tcaccgagcc ggacccgcgg
     1321 gaggatctgt ccggcgcgga cgtggcccgc aaggcgctga tcctgggacg cctgctcggc
     1381 ttcaagggcg agccggggtc ggtggtcacg gaatcgctgg tcccgcaggg agcagggtcg
     1441 ctgtcgctca agcagttcct cacgcgcctc accacctggg acgcggactg gaccgagcgc
     1501 atgcgcgcgg cgcgggcccg agggcagctg ctgcggtacg tggcgacagt cacgcagcgc
     1561 cggctgcggg tagggctcac cgccgtgccg gccacgagcc ctttcgcctc cctccatggt
     1621 accgacaacc agatcgtgtt caccaccgcg cggtaccggg agcatcccct ggtgatccgc
     1681 ggcccgggag ccggcccgct ggtgaccgcg gccggagtga tgaacgacgt gctggcgctg
     1741 gcgaggagat agggggagca ggggagcagc ggagcagggg agcagcggag cagcggag
//
LOCUS       DATIFF010000488         2570 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1294771, whole genome shotgun sequence.
ACCESSION   DATIFF010000488 DATIFF010000000
VERSION     DATIFF010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2570
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1294771"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2314)
                     /gene="priA"
                     /locus_tag="VLD58_07300"
     CDS             complement(<1..2314)
                     /gene="priA"
                     /locus_tag="VLD58_07300"
                     /inference="COORDINATES: protein motif:HMM:TIGR00595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005658 - alpha DNA polymerase:primase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HSB54145.1"
                     /translation="MTAGFGLVALPLPLAQPYTYRIPESLADRVVPGARVVVPVRQRE
                     IIGIVTGLTDAPPAQAARDILSAPDPVPALPEQLLETARWMAAYYGTPLGLVLKAVLP
                     GALWGESRVIAALAGEGIPGGLAGEVCTWLLRKGGEAPVAAIARGLKRPVWEAVNRLV
                     RAGGLTLRIEAPETDAAVATERVVTLNDPAPPLAEREELFKRRPAQRAVFEALEELGG
                     SAPLRHLAEQLGLSRPAIAALIERGLARDEAVTVHRDPFRDTPVTLPPPAPTPAQREA
                     IRAIAASPPGDGVLLFGVTGSGKTLVYLEAARQALAEGRGTIILVPEIALTPQTVSRV
                     RGVFGDEVAVLHSALSDGERADAWRAIRRGERRVVVGARSAIFAPVGPLGLIVVDEEH
                     EGSYKNNEAPRYQARDVALVRARLEKARLVLGSATPSPESMHRVGSRLTMVRLPERAG
                     AQPLPPVEVVDLRTAPRLKEARALPWSERLDAEVVAALARKEQVLLLLNRRGFATILQ
                     CPACGTVRECPNCSISLTVHQAPAGLRCHYCGHDEAIPDACAACGSAVQRMKGVGTQQ
                     LERFLAARFPEARLARMDLDTTSSRWSHQTILDKVGKGEVDILLGTQMIAKGLDFPNV
                     TLVGVVDADTGLHLPDFRAAERTFQLIAQVAGRAGRGPKGGRVVVQTRNPDHYALVAA
                     ARHDAESFLATELRQRESPPYPPLSSLVNLVISGESDTAVADVAGEVARWCSALVEHQ
                     KLEVDVLGPAPCAIGRIKGRWRWHVVLRGEA"
     gene            complement(2311..>2570)
                     /locus_tag="VLD58_07305"
     CDS             complement(2311..>2570)
                     /locus_tag="VLD58_07305"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HSB54146.1"
                     /translation="LAKCGSLREAQRMIAIARAHHMMVMVGCMIESSIAITAAAHFTP
                     LVDIVDLDGAALLGSDPFAGASIDGGQVRLPTAPGLGLSRR"
BASE COUNT          375 a          945 c          874 g          376 t
ORIGIN      
        1 cggcctcgcc ccggagcacc acgtgccagc gccagcgccc cttgatccgg ccgatggcac
       61 acggcgccgg acccagcaca tcgacctcca gcttctggtg ctccaccagc gcactgcacc
      121 agcgggccac ttcgcccgcg acatcggcca ccgcggtgtc cgattccccg gaaatcacca
      181 ggttcaccaa tgaggagagc ggcggatatg gcggggactc ccgctgcctg agctccgtcg
      241 ccaggaacga ttcggcatcg tgccgggccg ccgcaaccag cgcgtagtgg tcgggattcc
      301 tggtctgtac caccaccctg ccgcccttgg gaccccgccc tgcccgcccc gccacctgcg
      361 cgatgagctg gaaggtccgc tccgccgccc ggaaatcggg gagatggaga ccggtgtcgg
      421 catcgaccac accaaccagc gtgacattcg gaaagtcgag tcccttggcg atcatctggg
      481 tgccgagcag gatatcgact tcgcctttgc cgaccttgtc gaggatcgtc tggtgcgacc
      541 agcgggagct ggtggtatcc aggtccatcc gcgccagcct ggcttcggga aagcgcgccg
      601 cgagaaagcg ctcgagttgc tgggtcccca cacccttcat ccgctgtact gcgctgccgc
      661 aggccgcgca cgcatccgga atggcttcat cgtgcccgca atagtggcag cgcagtcctg
      721 ccggtgcctg gtgtaccgtg agcgagatgc tgcagttggg acactcccgc accgttccgc
      781 aggcggggca ctggagaatc gtggcgaaac cccggcggtt gaggagcagc agcacctgtt
      841 ccttccgggc cagggccgcc accacttcgg cgtcgagccg ctcgctccac ggcaatgccc
      901 gcgcttcctt gagacgtggg gcggtgcgca ggtcgaccac ctcgaccggc ggcagtggct
      961 gggctccggc gcgctcaggc agccgcacca tcgtgagacg gctccccacc cggtgcatgc
     1021 tttccggcga gggggtggca ctcccgagca ccagccgcgc cttctcgagg cgggcccgga
     1081 ccagcgccac atccctcgcc tggtagcggg gcgcctcgtt gttcttgtag ctcccctcgt
     1141 gttcctcgtc caccacgatc aggccaaggg gtccgacggg cgcgaagatc gccgagcggg
     1201 ccccgaccac gacccggcgc tctcctcggc ggatggcgcg ccaggcgtcg gctcgttccc
     1261 cgtcggagag ggcgctgtgg agcactgcta cctcgtctcc gaacactccg cgcacccggc
     1321 tcaccgtttg gggcgtgagc gcgatctccg gcaccaggat gatcgttccc ctgccctctg
     1381 ccagcgcctg tcgcgccgcc tcgaggtaca ccagcgtctt gccgcttccg gtcacgccga
     1441 agagcagaac cccgtcaccg ggcggcgacg cggcgatggc acggatcgcc tcgcgctgtg
     1501 ccggagtggg tgcgggaggc ggcagggtaa ccggcgtgtc acggaacgga tcgcggtgca
     1561 ccgtcaccgc ctcgtcccgc gccagccccc gttcgatcag cgcggcgatt gccggtcgcg
     1621 acaggcccag ctgctccgcc aggtgacgga gcggcgccga gccaccgagt tcctccagcg
     1681 cctcgaagac agcccgttga gccgggcgcc gcttgaacag ctcctcccgc tctgccagtg
     1741 gcggcgccgg gtcgttgagt gtcaccactc gctcggtcgc aaccgcggcg tccgtttcgg
     1801 gggcctcgat ccggagcgtg agcccaccgg cccgaaccaa acggttcacc gcctcccaca
     1861 ccggccgctt gagcccgcgc gcgatggccg ccaccggcgc ctcgccgcct ttgcgcagga
     1921 gccaggtgca gacctcgccc gcgaggccgc cgggaattcc ctcgcccgcc agcgccgcga
     1981 tgacgcgcga ttcaccccag agcgcgcccg gcaggaccgc cttgagcacc agcccgagcg
     2041 gcgtgccgta atacgccgcc atccagcggg cggtctcgag cagctgttcg gggagggccg
     2101 gaaccgggtc gggtgcggag aggatgtcgc gcgcggcctg ggccggcggc gcgtcggtga
     2161 ggccggtgac gatgccgatg atttcccgct ggcggaccgg gaccacgacc cgcgctccgg
     2221 gcaccacccg gtcggcgaga gactccggaa tccggtaggt gtacggctgg gccagtggca
     2281 gggggagcgc caccagcccg aagcccgcgg tcatcgccgg ctgaggccca gtccgggtgc
     2341 ggtggggaga cgcacctggc cgccgtcgat cgaggccccc gcgaagggat cgctcccgag
     2401 cagcgcggcg ccgtcgaggt cgacgatgtc gaccagcggg gtaaagtgcg ctgccgcggt
     2461 gatggcgatc gagctttcga tcatgcagcc gaccatcacc atcatgtgat gggcccgcgc
     2521 gatcgcgatc atccgctggg cctcgcggag gctgccgcac ttggcgagct
//
LOCUS       DATIFF010000489         1581 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_525232, whole genome shotgun sequence.
ACCESSION   DATIFF010000489 DATIFF010000000
VERSION     DATIFF010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_525232"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(21..>1581)
                     /locus_tag="VLD58_07310"
     CDS             complement(21..>1581)
                     /locus_tag="VLD58_07310"
                     /inference="COORDINATES: protein motif:HMM:NF014826.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HSB54147.1"
                     /translation="GVGPATLQIVQELVTSGRSSLLEELREQVPPGLVEMLQISGLGV
                     AKIRQIHESLDIDSLPDLEAAARDGRLARLPRFGQKTAENILRGIAYLRQASAFKLSH
                     HALEEAEGLQAALAGLPGVLRAEVAGEVRRRLDVVRDIVVVLVADVPPAEIFRRIGQL
                     PGVHEFSGQDERRVTLRVSGGAQAQVIVTTPRNAGAVLVQATGSEAHLAQVAAHAREH
                     GFGLDGAALWRGSEFVPTQDEAAFYQALGLATIPPELREGRGEVEAAAAGRLPRLIER
                     SDLQGFLHCHSTWSDGSNSIEELARACLEAGYKYVGLTDHSRAAAYAGGLTPDDLQRQ
                     ADEIDAVNARLEGVRVLKGIEADILVNGDLDYDDAVLARLDFVIGSIHSRFSLSREEM
                     TARILAAMDNPHLTIIGHPTGRLLLTRDPYPVDIGRIFEKAARSGVVIEINADPHRLD
                     LDWRLAREARDAGVRISIGADAHNLAGLRNVEFGVAMARKAWLTAGDVLNTLPLDDLL
                     ALVARRRRGGV"
BASE COUNT          231 a          582 c          520 g          248 t
ORIGIN      
        1 gcctctccgg attccagcct tcatactccc cccctccgtc gccgcgccac cagcgcgagc
       61 aggtcgtcca gcggcagggt attcagcacg tcacccgccg taagccacgc cttgcgggcc
      121 atggcgacgc cgaattcgac gttgcgcagg cccgccagat tgtgggcgtc cgccccgatg
      181 gagatccgga cgccggcgtc gcgggcctcg cgggccagac gccagtcgag gtccagccgg
      241 tgcgggtctg cgttgatttc gatcaccacg ccgctccggg ccgccttctc gaagatgcgg
      301 ccgatgtcca cgggataggg atcgcgggtc agcagcagcc gcccggtcgg atggccgatg
      361 atcgtgaggt gcggattgtc catagcggcc aggatcctcg ccgtcatctc ctcccggctc
      421 aggctgaagc gactgtggat ggagccgatc acgaagtcca gccgggccag cacggcgtcg
      481 tcgtagtcga gatcgccgtt caccaggatg tctgcctcga tccccttgag cacccggacc
      541 ccttcaagcc gcgcgttgac cgcatcgatc tcgtccgcct gccgctgcag gtcgtcgggg
      601 gtgagccctc cggcgtacgc cgctgcccgg ctgtggtcgg tgaggccgac atacttgtag
      661 cccgcctcga ggcaggcccg ggcgagctct tcgatcgagt tggaaccatc cgaccaggtg
      721 gagtggcagt ggaggaaacc ctgcaagtcg ctccgctcga tgagccgcgg cagccggccg
      781 gcagcggcgg cttccacctc gccacggcct tcccggagct cgggagggat ggtggccagg
      841 cccagggcct gatagaacgc ggcttcatcc tgcgtgggca cgaactcact tccccgccag
      901 agcgcggccc cgtccaggcc gaacccatgt tcgcgtgcgt gggcggccac ctgggccagg
      961 tgcgcctcgc tgccggtggc ctgtaccagc accgccccgg cgttccgggg ggtggtaacg
     1021 atcacctgcg cctgtgctcc cccgctcacc ctcagcgtca cccgccgctc gtcctggccc
     1081 gagaactcgt gcactcccgg cagctggccg atcctccgga agatctcggc cggcggcaca
     1141 tcggcgacca ggacgaccac gatgtcccgc accacgtcca gccgccggcg cacctcgccc
     1201 gccacttcgg cccgaagcac cccgggcagc ccggcgaggg cggcctggag cccctccgcc
     1261 tcttccagcg catgatgcga cagcttgaac gcgctggcct ggcgcaggta ggcgatgccc
     1321 cggaggatgt tctccgccgt cttctgtccg aagcgcggga gccgcgccag gcggccgtcg
     1381 cgggccgcgg cctccaggtc gggaagcgaa tcgatgtcga gtgattcgtg gatctgccgg
     1441 atcttggcga cacccaaccc cgaaatctgg agcatctcga ccaggcccgg tggaacctgc
     1501 tcccgcagct cctccagcag ggatgagcgt ccgcttgtga ccagctcctg gacgatctgc
     1561 agagtggcag gtccgacgcc c
//
LOCUS       DATIFF010000490         1306 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2217225, whole genome shotgun sequence.
ACCESSION   DATIFF010000490 DATIFF010000000
VERSION     DATIFF010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2217225"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1306
                     /locus_tag="VLD58_07315"
     CDS             <1..>1306
                     /locus_tag="VLD58_07315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HSB54148.1"
                     /translation="LQLAVGKPAVLVRNGTTRPLTKDPLSEAQIAALVREIAPADAAA
                     RIGSAADFEYRAPSGSVQVQSGPAETTVRPRTAAGRPGRSDAELRELRGAMDALFHRL
                     VESGASDLHLRTGDVPILRLNGELVRLEGEPLPAERLDGMVTSIMEPRELGDFREHND
                     ADWAYEIEGLARFRCNAGRDRRGPMGVFRTIPGRVMTADEMGLSREVQHLCYLTKGLV
                     LVTGPTGSGKSTTLAALVDLINRTRTDHILTIEDPIEFVHQSRSCLVTQRQIGLHTRS
                     FRHALRAALREDPDIVLVGEMRDLETVSIAIETAETGHLVFGTLHTTTAASTIDRIID
                     QFPADRQAQIRIMLSESLRGVIAQTLCRKIGGGRVAAREILLSIPAVSNLIREGKTFQ
                     IPSIMQTNRKTGMVTLNDALMELVDQGLVEPKEAYIKAVEKAT"
BASE COUNT          219 a          439 c          469 g          179 t
ORIGIN      
        1 cgcttcagct ggccgtcggg aagcccgccg tgctcgtccg gaacggcacg acgcggcccc
       61 tgaccaagga tccgctgagc gaggcgcaga tcgcggcgct ggtacgggag atcgcaccgg
      121 cggatgccgc cgcacggatc gggtcggcgg cggacttcga gtatcgcgct ccgtcgggca
      181 gcgtccaggt gcagagcggc ccggccgaga ccaccgtgcg tccgcggacc gctgccggcc
      241 ggccgggccg gagcgacgcg gagctgcggg agcttcgggg tgcgatggac gccctgttcc
      301 accggttggt cgaatccggg gcgtcggacc tgcacctgag gaccggggac gtcccgattc
      361 tccggctgaa cggggaactg gtgcgcctgg aaggcgagcc gctgccggcg gagcggctgg
      421 acggcatggt gacgagcatc atggaacccc gggagctggg cgacttccgc gagcacaacg
      481 acgccgactg ggcctacgag atcgagggcc tggcccggtt ccggtgcaac gccggccgcg
      541 accggagagg ccccatgggg gtcttccgga cgatcccggg ccgggtgatg acggcggacg
      601 agatggggct gagccgcgag gtgcagcacc tctgctatct gaccaagggg ctcgtgctcg
      661 tgaccggccc tacgggctcg gggaagtcca cgaccctcgc cgcgctggtg gatctgatca
      721 accggacgcg gaccgaccac atcctgacga tcgaagaccc gatcgagttc gtgcaccaga
      781 gccggagctg cctggtgacc cagcgacaga tcggcctcca cacccgctcc ttcaggcacg
      841 ccctgcgggc ggcgctgcgc gaggacccgg acatcgtgct ggtcggcgag atgcgcgacc
      901 tcgagaccgt gtcgatcgct atcgaaaccg cggagaccgg ccacctggtc ttcgggaccc
      961 tgcacaccac gacggccgcc tcgacgatcg atcgcatcat cgaccagttc cccgccgatc
     1021 ggcaggcgca gatccgcatc atgctgtccg agtccctccg cggcgtgatc gcgcagacgc
     1081 tgtgtcgcaa gatcggcggc gggcgcgtcg ccgcccgcga gattctgctc agcattccgg
     1141 cggtctcgaa cctgatccgg gaaggcaaga ccttccagat cccgtccatc atgcagacca
     1201 accggaagac cgggatggtg acgctgaacg acgccctcat ggagctggtg gaccagggtc
     1261 tggtggagcc caaggaggcg tacataaagg cggtggagaa ggccac
//
LOCUS       DATIFF010000491         1037 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_987461, whole genome shotgun sequence.
ACCESSION   DATIFF010000491 DATIFF010000000
VERSION     DATIFF010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_987461"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1037
                     /locus_tag="VLD58_07320"
     CDS             <1..>1037
                     /locus_tag="VLD58_07320"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HSB54149.1"
                     /translation="IFAVVDVFFVSRLGPDAVATVGLTESMLAIIYTVAMGLSIGVMA
                     TVARRIGERRPDDAADAAVQGIALGLGLAAVIGVTGVIFAPDLLHLMGASPAVIGIGS
                     NYTRMMLGGNGVILLLFLINAIFRGSGDAAIAMRVLWLANGINIVLAPSLIYGVGPLP
                     RLGVTGAAVGTTIGRGIGVLFQLWNLSRSGRRVAVRKRHLTLHPKVMLNLVRLSGAGT
                     FQVVVGTASWIGLVRILSTFGSYAVAGYTIGIRVILFALLPSWGLANAAATMVGQNLG
                     AGRADRAEEAVWTAARYNMIFLGGVGLAFLGGAPLIAGVFTTDPVVYSFAVACLRTVS
                     LGFLFDGAGMV"
BASE COUNT          137 a          328 c          382 g          190 t
ORIGIN      
        1 gatcttcgcg gtggtagacg tcttcttcgt gtcccggctg gggcccgacg cggtcgccac
       61 ggtgggcctc accgagtcga tgctggccat catctacacc gtggccatgg gcctcagcat
      121 cggggtcatg gccacggtgg cacggcgcat cggcgaacgg cggccggacg atgcagccga
      181 cgccgcggtg caggggatcg cactgggact gggcctggcg gcggtgatcg gggtgaccgg
      241 ggtgatcttc gcgcccgatc tgctccacct gatgggcgcg agcccggcgg tgatcgggat
      301 cggctcgaac tacacccgca tgatgctggg tggaaacggc gtgatcctgc tgctcttcct
      361 gatcaacgcc atcttccgcg gcagcgggga tgcggcgatc gcgatgcggg tgctctggct
      421 ggcgaacggg atcaatatcg tgctggcgcc gtcgctcatc tacggcgtcg ggccgctccc
      481 gaggctgggg gtgaccggag ccgcggtggg caccaccatc ggccggggga tcggagtcct
      541 gttccagctc tggaacctga gccggtcggg ccggcgggtc gcggtgcgca agcggcacct
      601 cacgctccac ccgaaggtga tgctgaacct ggtgcggttg agcggggcgg gaaccttcca
      661 ggtcgtcgtc ggcaccgcca gctggatcgg gctggtacgg attctctcga ccttcggcag
      721 ctatgccgta gcggggtaca ccatcgggat ccgggtaatc ctgttcgcgc tgcttccctc
      781 atggggcctc gcgaacgccg cggccacgat ggtgggacag aatctcggcg ccgggcgggc
      841 ggaccgcgcc gaggaagcgg tctggaccgc ggcgcgctac aacatgatat tcctgggagg
      901 cgtaggcctg gcattccttg gcggggcgcc gctgattgcg ggggtcttca cgaccgatcc
      961 cgtggtgtac tcctttgccg tcgcctgcct gcgcaccgtc agcctcggtt ttctcttcga
     1021 cggcgccggg atggtct
//
LOCUS       DATIFF010000492         1304 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2217247, whole genome shotgun sequence.
ACCESSION   DATIFF010000492 DATIFF010000000
VERSION     DATIFF010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1304
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2217247"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1254)
                     /locus_tag="VLD58_07325"
     CDS             complement(<1..1254)
                     /locus_tag="VLD58_07325"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HSB54150.1"
                     /translation="MMGRDTPSPGLDKTAQYIADQFSRFGLKPAGENGTWFQRYTIAR
                     RKLDPATSRVTFRVGADQVVVRLSRDASLTFGGVPSRELTTAAVLLGGAFTPDDAARL
                     DARDKVAILVLDYSHPLPAGTVPAVQALIAGGAAGIVILSNRDSAAFAQRVAGQARER
                     TEVERMGTAPPVVEVKEGAVAAVLAAAGVRADEIRGQSDPVSRALPELKVTFGLKEQV
                     LSSVTAPNTVGLLEGSDPKLRKEYVVFSAHMDHVGVAGPNGTGGCRARGADSICNGAD
                     DDGSGTVGVVELAQAFTQPAARPRRSILFLTVSGEEKGLFGSSYFTEHPTVPLPQVVA
                     DLNIDMIGRNWKDTIVAIGKEHSDLGATLNRVAAAHPELDMAAIDDRWPDENFYFRSD
                     HFNFARKGVPILFFFNGVHPDYHEVS"
BASE COUNT          193 a          443 c          455 g          213 t
ORIGIN      
        1 ggagacttcg tggtagtcgg ggtgaacccc gttgaagaag aagaggatag gcacgccctt
       61 gcgggcgaag ttaaagtgat cggagcggaa gtagaagttc tcgtccggcc accggtcgtc
      121 gatcgcggcc atgtcgagct ccggatgcgc cgccgccacc cggttgagcg tggcgcccag
      181 gtcggagtgc tccttgccga tcgcgacgat ggtgtctttc caattccgcc cgatcatgtc
      241 gatgttcagg tcggccacga cctgcggcag cgggacggtg gggtgttccg tgaagtagga
      301 gctgccgaag aggccctttt cctccccgct cacggtcagg aacaggatcg agcgccgcgg
      361 gcgcgcggcg ggctgagtaa acgcctgcgc cagttccacc acgcccaccg tgccggagcc
      421 gtcgtcgtcc gcgccgttgc agatgctgtc cgcgccgcgc gcccgacacc cgcccgtgcc
      481 gttcggcccc gccactccga cgtggtccat gtgggccgag aagaccacgt actctttcct
      541 gagcttcggg tcagacccct cgagcaggcc gaccgtgttc ggcgcggtca ccgaggagag
      601 cacctgctcc ttgagcccga acgtcacttt gagctcgggc aacgcgcggg acacggggtc
      661 gctctgcccc cggatctcat ccgcccgcac gcctgctgcg gcgagcaccg cagcgaccgc
      721 accttctttc acttccacca ccgggggcgc ggtccccatc cgctcgacct cggtccgctc
      781 ccgggcctgc ccggctacgc gctgcgcgaa ggcggcggaa tcgcgattcg acaggatgac
      841 gatgccggcg gctccgccgg cgatcagggc ctgcactgcg ggcacggtgc cggcagggag
      901 cgggtgggag tagtcgagca ccaggattgc aaccttgtcc cgcgcgtcca gccgggcggc
      961 atcgtccggg gtgaaggcgc cgccgagcag caccgcagct gtggtgagct cgcgcgacgg
     1021 gacccctccg aaggtgaggc tggcatcccg ggagaggcgc accaccacct ggtccgcgcc
     1081 cacccggaag gtcacgcgcg acgtggccgg atcgagcttg cggcgcgcga tggtgtagcg
     1141 ctggaaccag gtgccgtttt cgcccgcggg cttgaggccg aatcggctga actggtccgc
     1201 gatgtattgc gctgtcttgt ccaggccggg gctcggcgta tcgcgtccca tcatggaatc
     1261 gtccgcgatg atggcgatcc gtcgctggat gtcggcggcc gtga
//
LOCUS       DATIFF010000493         1520 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_832426, whole genome shotgun sequence.
ACCESSION   DATIFF010000493 DATIFF010000000
VERSION     DATIFF010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_832426"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..>1520)
                     /locus_tag="VLD58_07330"
     CDS             complement(13..>1520)
                     /locus_tag="VLD58_07330"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HSB54151.1"
                     /translation="PEALSGYQAAIATGEQTGDRVAVAEALRRSSVLYHQRNEPEIAR
                     AHCERSLETALMLGDQGLAAEALNTLGGIEFERGAMQRARELLHSALDLGRGRPDLVS
                     RIEQNLGILATIQGDHAAALSHYASSLEACRAGGDQKGCAIAFHNLGMISADRGEWAA
                     AEKYYEESRRIAEQIGDVHLQGLCRLNHAEVHLARQGFEQARESAEAALAIFDRLGSR
                     LDKADAYRVLGVVYRETGRAALSEARLKAAIDLAVATGSVLSEAEASRELARLYQGMG
                     RNQEALSLLNAAWRLFSRLDAHLDLVDVQAKVADLEGTFLAVVRDWGQSIESADSYTF
                     GHCERVAAYAEAVARALGLLEADLTTIRLGAYLHDVGKVKVPHEILNKPGRLTAEEFR
                     VIQQHPVWGVELLATIEFPWDIKPIIRWHHEKCDGTGYPDRLAGDEIPVAAQIIGIVD
                     VYDALTTTRSYRGALPHETALERMRETAHWWRQDVFAAFMRSVGTPAPAAT"
BASE COUNT          234 a          526 c          516 g          244 t
ORIGIN      
        1 ggggttcacg cctcaggtgg cggccggagc gggggtcccg accgagcgca tgaaggcggc
       61 aaacacgtcc tgccgccacc agtgcgcggt ctcccgcata cgctccagcg ccgtctcatg
      121 cgggagcgcg ccccggtagc tgcgggtggt cgtgagggca tcatagacat ccacgatgcc
      181 gatgatctgg gccgccaccg ggatctcatc accggccagg cggtcgggat aaccggtgcc
      241 gtcgcacttc tcatgatgcc accggatgat cggcttgatg tcccagggaa actcgatggt
      301 cgcgagcagc tccacccccc acacgggatg ctgctggatg acccggaact cctcggcggt
      361 gagccggccg ggcttgttca ggatctcgtg gggaaccttc accttgccca cgtcgtggag
      421 ataggcgcca aggcggatgg tggtcagatc ggcctcgagc agcccgaggg cacgggccac
      481 ggcctcggcg taggccgcca cccgctcgca gtggccgaaa gtgtagctgt cggccgattc
      541 gattgactgg ccccagtccc gcacgaccgc caggaaggtc ccttcgaggt ccgccacctt
      601 ggcctggacg tccaccaggt cgagatgggc gtccagccgg ctgaacagcc gccacgcggc
      661 gttcaggaga gagagcgctt cctggttgcg ccccatgccc tggtagagcc gggccagctc
      721 tcgggaggct tccgcctcgc tgagaacgga acccgtggca accgccaggt cgatggccgc
      781 cttcaaccgg gcctccgaca aggcggcgcg gccggtctca cggtacacca cccccagcac
      841 gcggtaggcg tcggccttgt ccagccggga gcccagccta tcgaagatgg ccagcgcggc
      901 ctcggcgctc tcccgggcct gctcgaaccc ctgccgggcc aggtgcacct cggcatgatt
      961 gaggcgacag aggccctgca ggtgcacgtc accaatctgt tccgcgatcc tcctgctctc
     1021 ctcgtaatac ttctcggcgg cggcccattc accccggtcg gcgctgatca ttccaaggtt
     1081 gtggaaggcg atggcgcacc ccttctgatc gccgccggca cggcaggcct cgagcgacga
     1141 ggcgtagtgc gacagtgcgg ccgcgtgatc gccctggata gtggcgagga tgccgagatt
     1201 ctgttcgatc cggctgacga ggtccggacg gccgcggccg aggtcgagcg cgctgtggag
     1261 cagctccctg gcccgctgca tggcgccccg ctcgaactcg ataccgccga gggtgttcag
     1321 ggcttcggcc gcgagcccct ggtcgcccag catgagcgca gtctccaggc tgcgctcaca
     1381 atgcgcccgg gcgatttccg gctcgttgcg ctggtgatag aggacgctcg agcggcgaag
     1441 cgcttcggcc accgctaccc ggtccccggt ttgttcccca gtggcaatcg cggcctggta
     1501 gccggagagg gcctcgggaa
//
LOCUS       DATIFF010000494         2405 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2217453, whole genome shotgun sequence.
ACCESSION   DATIFF010000494 DATIFF010000000
VERSION     DATIFF010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2405
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2217453"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..808)
                     /locus_tag="VLD58_07335"
     CDS             complement(<1..808)
                     /locus_tag="VLD58_07335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HSB54152.1"
                     /translation="MSATVPPAERLTGWRYPRTQLSLPESHGTIHVPRTPGFWRKALA
                     FAGPGYLVAVGYMDPGNWATDLAGGARFGYALLSVVLLSNLMAILLQSLALRLGIVSG
                     RDLAQACRDHYSRPVSFALWVLCEIAIAACDLAEVIGSAIALNLLFGIPLIWGVCLTA
                     LDVLIILLLQHRGFRYLEAFIIALVVTIGACFALELVLARPDLGAVARGLVPTTQIVT
                     NPNMLYIAIGILGATVMPHNLYLHSSIVQTRRIGGEPAAKREAIRFATFDS"
     gene            complement(805..1491)
                     /locus_tag="VLD58_07340"
     CDS             complement(805..1491)
                     /locus_tag="VLD58_07340"
                     /inference="COORDINATES: protein motif:HMM:NF015956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent transcriptional regulator"
                     /protein_id="HSB54153.1"
                     /translation="MNAAVGHEPLTRSVEDYLKVIYSLSPEGRTASTRDIAHRLELSA
                     PSVSGMIKRLSEQGLLEHIPYRGVQLTAEGRRAALRMIRRHRILEAYLVARLGYTWDA
                     VHEEAERLEHAVSESLIERMAEALGNPDADPHGEPIPTAEGWIEEVEATPLSEIPAGQ
                     TVEVRRVTAGDPDRLRYLASIGLQPGALVTVVERQPFSGPITLRVAEQDRVIGHELAE
                     GLLCRRGSEA"
     gene            complement(1624..2235)
                     /locus_tag="VLD58_07345"
     CDS             complement(1624..2235)
                     /locus_tag="VLD58_07345"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005777 - peroxisome [Evidence IEA];
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003986 - acetyl-CoA hydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0008413 - 8-oxo-7,8-dihydroguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0009132 - nucleoside diphosphate metabolic
                     process [Evidence IEA];
                     GO_process: GO:0015938 - coenzyme A catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HSB54154.1"
                     /translation="MLRRVLPLAQPLSLTLSPSLAALAERLARRPAIEASAPERRWAA
                     VALILAPDPDSILLIRRAERAGDPWSGQIGLPGGRRGPEDADLVETATREAVEEVGIA
                     LSRTHRLGVLDDVTPRTPTLPPIAVRPYVFALPTRPPVRLNAEVASSHWIALADLAQP
                     AASGLTTVTVRGSLLEVPAFLLEGMVVWGMTERILASFLQAIS"
     gene            complement(2199..>2405)
                     /locus_tag="VLD58_07350"
     CDS             complement(2199..>2405)
                     /locus_tag="VLD58_07350"
                     /inference="COORDINATES: protein motif:HMM:TIGR02605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FmdB family zinc ribbon protein"
                     /protein_id="HSB54155.1"
                     /translation="YCPSCGADFERLVRNGTTVSCPACSERKVERRMSLPARPATAGK
                     QADFSKLGPPPGGCCGGSCHSHSH"
BASE COUNT          401 a          802 c          863 g          339 t
ORIGIN      
        1 tggaatcgaa ggtggcgaag cggatcgcct cccgcttcgc ggccggctcg ccgccgatgc
       61 gccgggtctg cacgatcgag gagtgcaggt agaggttgtg cggcatgacc gtggcgccga
      121 ggatgccgat cgcgatgtac agcatgttcg ggttggtcac gatctgcgtg gtcggcacca
      181 gcccccgggc caccgcgccc aggtccgggc gcgccagcac cagctcgagc gcgaagcagg
      241 cgccgatggt caccaccagg gcgatgatga acgcttcgag gtaacggaaa ccccggtgct
      301 ggagcagcag aatgatcagc acgtcgaggg cggtgaggca gacgccccag atgagcggaa
      361 tgccgaacag caggttgagc gcgatggcgg agccgatcac ctcggccagg tcgcacgccg
      421 cgatcgcgat ctcgcagagc acccagagcg cgaagctgac cggccgggag tagtggtcgc
      481 ggcaggcctg ggcgaggtcg cgcccgctga cgatcccgag ccggagcgcc agggactgga
      541 gcaggatcgc catcagattg gaaagcagga ccacgctgag cagcgcatag ccgaagcgcg
      601 cgccgccggc caggtcggtg gcccagttgc cggggtccat gtagccaacg gccaccaggt
      661 agcccggccc cgcgaacgcc agcgccttgc gccagaagcc cggcgtccga gggacgtgga
      721 tcgtcccgtg ggactcgggc aggctcagct gggtgcgcgg atagcgccag ccggtgagtc
      781 gttcagccgg ggggacggtc gcgctcatgc ttcactaccc cggcggcaca acaggccctc
      841 ggccagctcg tgcccgatca cgcggtcctg ctccgccacg cggagcgtga tcggaccact
      901 gaacggctgg cgctcgacca ccgtcaccag cgcccccggc tggaggccaa tcgaggccag
      961 gtaacgaagg cggtccgggt cgcccgcggt gacccggcgg acctcgaccg tctggccggc
     1021 cgggatctcg gatagcggcg tcgcctcgac ctcctcgatc cacccttccg ccgtggggat
     1081 gggctcgcca tgcgggtcgg cgtccgggtt gcccagcgcc tcggccatcc gctcgatcag
     1141 gctctccgac acagcgtgct ccagccgctc ggcctcctcg tgcaccgcgt cccaggtgta
     1201 tcccaaccgg gcgaccagat acgcctcgag gatccggtgg cgccggatca tccgaagcgc
     1261 cgcccggcga ccttcggcgg tgagctgaac gccccggtaa gggatgtgct ccagaagccc
     1321 ctgttccgac agccgcttga tcatcccgct caccgaggga gccgacagct ccaggcggtg
     1381 cgcgatgtcc cgggtcgagg cggtccgacc ctcgggggag aggctgtaga tgaccttgag
     1441 gtagtcttcg accgagcgcg taaggggctc gtgaccgaca gctgcgttca tacgaatcca
     1501 gtatttagct gatcctaatg tcctgctgtc tacgtgctaa tgtcaagttt tccagacgcg
     1561 aatcgcgcgc cagcatgacg gcgccatggc gccaccgtgc tgtcggagat atacaagtcg
     1621 ttgtcaggaa atagcttgaa ggaatgaagc gaggatccgc tcggtcatgc cccagactac
     1681 catgccctcc aagaggaagg ccgggacctc cagcaagctg ccgcgaaccg tgacggtggt
     1741 caggccgctg gcggccggct gagcaaggtc cgccaacgca atccagtggg aggacgcgac
     1801 ctcggcgttg aggcgaaccg ggggccgagt cggcagggcg aagacgtacg ggcggaccgc
     1861 tatcggtggc agggtcgggg tcctgggagt tacgtcatcg aggacgccca ggcggtgcgt
     1921 gcgggacagc gcgatgccga cttcctccac tgcctcccgg gttgccgtct cgaccagatc
     1981 cgcgtcttcg ggcccccggc ggccacctgg aagtccgatc tgcccagacc atggatcgcc
     2041 ggcgcgctcg gcccgccgga tgaggaggat ggaatcggga tccggagcga ggatcagcgc
     2101 gaccgccgcc caccggcgct cgggggccga cgcttcgatc gcggggcgcc gggcgaggcg
     2161 ctcggccagc gcggcaaggg acggcgagag cgttaggctc agtggctgtg cgagtggcag
     2221 gacccgccgc agcacccgcc cggcggggga ccgagcttgc tgaagtcggc ctgctttccg
     2281 gcggtggccg ggcgggcggg gagcgacatc cggcgctcga ccttccgctc gctgcatgcg
     2341 gggcagctca ccgtcgtacc gttccgaacc agccgctcga agtcggcgcc gcaggacggg
     2401 cagta
//
LOCUS       DATIFF010000495         3528 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1295205, whole genome shotgun sequence.
ACCESSION   DATIFF010000495 DATIFF010000000
VERSION     DATIFF010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3528
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1295205"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..304)
                     /locus_tag="VLD58_07355"
     CDS             complement(<1..304)
                     /locus_tag="VLD58_07355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54156.1"
                     /translation="MGQLWTRRILGAAVVTAVTTLSGCTAALKPNTDYNIQDFISGVT
                     DGSGTVSAVLVQGAAPNAAGGPSASVTGVAVMINGGSSQQSLTAGSAFTKVILAIDG"
     gene            538..1137
                     /gene="purN"
                     /locus_tag="VLD58_07360"
     CDS             538..1137
                     /gene="purN"
                     /locus_tag="VLD58_07360"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HSB54157.1"
                     /translation="MKLAVCVSGRGSNLVALLQALRGSEAARVVLVLSNRADAPALER
                     AREWGIAAESLASFKDGAEWLERLRSHEVDLIVLAGYLKLVPPDVIRAYRGRIVNIHP
                     ALLPAFGGSGMYGHHVHEAVIRSGAAQSGATVHLVDEEYDRGAILAQARVPVLPGDTP
                     DTLAARVLEAEHRLLPQVILHAAAAGRPVPLADPLASPA"
     gene            1148..2677
                     /gene="purH"
                     /locus_tag="VLD58_07365"
     CDS             1148..2677
                     /gene="purH"
                     /locus_tag="VLD58_07365"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018287218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HSB54158.1"
                     /translation="MPRALISVSDKRGIVPFAQGLVDLGWDIISTGGTFAALRSAGVP
                     VTAVEAVTGFPEILDGRVKTLHPAIHAALLARRDVPEHMTALSARGIVPIDLLAVNLY
                     PFRETVAKPHVTFEDAIENIDVGGPTMLRSAAKNHDSVIVISDPTDYSRVLDLLKGGG
                     VSDHERRALAAKVFSHTAEYDGAITRYLTPQEDGLPDRIQFSFERLMPLRYGENPSQR
                     AGLYVDEEPRGLRDLKQRQGKELSFNNILDLDAAMWTASLWSSRPACAIIKHTTPCGV
                     AVAASAAEAFRKALSCDPKSAFGGVVAFNTVVDRKTAEAMAELFLEVVVAPSFHDEAL
                     QVLAARKNLRAVELPVSRGQGGLDIKRVRGGVLLQDRFVPEASDGDWKVVTTRTPTEQ
                     EWGDLRFAWAAVATVKSNAVLIARDEMTIGIGAGQMSRVDSSFMAVHKARQEGHDPRG
                     AVMASDAFFPFPDGVEEAAAAGVTAIIQPGGSVRDAEVIAAANQHGLAMVLTGKRQFR
                     H"
     gene            2800..>3528
                     /locus_tag="VLD58_07370"
     CDS             2800..>3528
                     /locus_tag="VLD58_07370"
                     /inference="COORDINATES: protein motif:HMM:NF022481.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2723 domain-containing protein"
                     /protein_id="HSB54159.1"
                     /translation="MTSPTTTDRDPPPYLLAALAGLVVLGIYIVTLAPTTAFWDTSEY
                     IAAAYVLGIPHPPGNPLFVVLAHVWGAIPFAASYAVRINLFAAVTSAASAALWFLVAD
                     RWMRNVVPARWPRLAASFAGVLVSATVWTVWNQSTVNEKVYTVSMLSTALVMWLGVHW
                     ADDDQGEHRDRYLILIAYVLALSSTNHLMGVLAAPAVAVYVLATEPGMLLKPWVLWLA
                     VTLGLAVSGKWTVLVSGEPAEQAVV"
BASE COUNT          534 a         1233 c         1170 g          591 t
ORIGIN      
        1 ggccgtcgat cgcgaggatc accttggtga aggccgatcc ggcggtaagg ctctgctgcg
       61 agctgccgcc attgatcatc accgccacac ccgtgaccga ggcggagggc ccaccggctg
      121 cgttaggcgc cgcgccctgc accagcaccg cgctgacagt gcccgagcca tcggtgacgc
      181 cgctgatgaa gtcctgaatg ttgtagtcgg tgttcggctt gagcgccgca gtgcacccac
      241 tgagcgtggt gacggcggtc accaccgctg cgccgagaat ccgcctcgtc cagagctgtc
      301 ccatgtccca gtcctcgtga tcgggtgaca ttcccatccg ggccgcagat gggcaatgcg
      361 cagaccacca gcccgttcca tcccggaggt gtcccgggaa tgtcgagcta agtgcatgcg
      421 atacacgcga ttatcggaca aggctcgggc gtactaaaga tctcggtcac cctccccgac
      481 ccctgaacca gcccttcaac ccctgcccgg gggccgctaa gttcttgcgc catgccaatg
      541 aagcttgccg tctgcgtgtc gggccggggg agcaatctgg tggccctgct gcaggcgctc
      601 cggggctccg aggccgcgcg ggtggtcctg gtgctcagca accgggcgga cgccccggcc
      661 ctcgagcggg ctcgggagtg gggaatcgcg gccgagagcc ttgccagctt caaggacggg
      721 gccgagtggc tggaacggct tcgcagccat gaggtcgatc tgatcgtgct ggccggatac
      781 ctcaagctgg tgccacctga cgtgatccgg gcctaccgcg gccgcatcgt gaatatccat
      841 cccgccctcc tccccgcctt tggcggttcg gggatgtacg gtcaccacgt gcatgaggcg
      901 gtgatccgga gtggtgcggc ccagtcgggc gcgacagtcc atctggttga tgaggagtac
      961 gaccgcggcg ccatcctggc ccaggcccgg gtgccggtgc ttccgggcga cacccccgat
     1021 acgctggcgg cacgggtgct cgaggccgag caccggctgc tgcctcaggt gattctgcat
     1081 gccgcggcgg ccggacggcc ggtgccgctg gccgaccccc tggcatctcc cgcatgagga
     1141 ggttcgtgtg ccccgggcgc tgatttccgt aagtgacaag cgggggatcg tccccttcgc
     1201 ccaggggctc gtggacctcg gctgggacat catctcgact ggcggcacct tcgctgcgct
     1261 ccgctcggcc ggcgttccgg tgacggcggt ggaagcggtc accggatttc ccgagattct
     1321 cgatggccgg gtcaagaccc tgcatccggc gatccacgcg gccctgctgg cccggcgcga
     1381 cgtgccggag cacatgaccg cgctctcggc ccgcgggatt gtcccgatcg acctgctcgc
     1441 ggtgaacctc tatcccttcc gcgaaaccgt cgccaagccg cacgttacgt tcgaggatgc
     1501 gatcgagaac atcgatgtgg gcgggcccac catgctccga tctgccgcca agaaccacga
     1561 ctcggtgatc gtcatttccg acccgaccga ctacagccgg gtgctcgacc tgctcaaggg
     1621 tggcggggtc tccgatcacg agcggcgggc cctcgcggcc aaggtcttca gccataccgc
     1681 cgagtacgac ggagccatca cccgctatct cacgcctcag gaagacggcc tcccggaccg
     1741 gatccagttc tcctttgaac ggctgatgcc gctccgctat ggcgagaatc cgagccagcg
     1801 ggccgggctc tatgtggacg aggagcctcg cggcctgcgc gatctgaagc agcgccaggg
     1861 gaaggaactc tcgttcaaca acatcctcga cctcgacgcg gcgatgtgga ctgcttcgct
     1921 ctggtccagc cgcccggcct gcgccatcat caagcacacc accccgtgcg gcgtcgcggt
     1981 cgcggcgtcg gccgcggaag ccttccgcaa ggcgctctcc tgcgatccca agtcggcctt
     2041 cggtggcgtg gtagccttca ataccgtggt cgaccggaag accgccgagg cgatggcgga
     2101 gctcttcctg gaagtggtgg tcgcaccgtc cttccatgac gaggcgctcc aggtcctcgc
     2161 cgcccggaag aacctgcgcg ccgtcgagct gccggtgagc cggggccagg gcggcctcga
     2221 catcaagcgg gtccgcggcg gcgtgctgct gcaggaccgc ttcgtccccg aggccagcga
     2281 cggcgactgg aaggtggtga ccacccgcac gcccaccgag caggagtggg gcgacctgcg
     2341 ctttgcctgg gccgcggtgg cgaccgtcaa gtcgaacgcg gtactgatcg cccgggacga
     2401 gatgaccatc gggatcggcg ccggccagat gagccgggtg gacagttcct tcatggcggt
     2461 gcacaaggca cggcaggagg ggcacgatcc caggggcgcg gtgatggcct cggacgcgtt
     2521 cttccccttc cccgatggtg tggaagaagc tgctgccgcc ggcgtcactg ccatcatcca
     2581 gcccggcggc tcggtgcggg acgccgaagt catcgccgcc gccaaccagc acgggctggc
     2641 gatggtgctg acgggcaagc ggcagttccg gcattgaggt cgagggtcaa gggtcacggg
     2701 ccgagggccc gcaccaccaa ccctcgaccc aagaccgatg accgatgacc catgacccat
     2761 gaccctcgac cctcgaccct cgacttcctt cccaaataga tgaccagccc aaccaccacc
     2821 gaccgcgacc caccgcccta tctccttgcc gcgctggcgg ggctggtcgt gctcggcatc
     2881 tatatcgtga ccctggcccc gaccaccgcg ttctgggaca cctcggagta catcgccgcc
     2941 gcctacgtgc tgggcattcc ccatccgccg gggaatccgc tcttcgtggt gctggcccat
     3001 gtctggggcg ccatcccgtt cgccgccagc tacgccgtcc ggatcaacct cttcgccgcg
     3061 gtgaccagcg ccgcctccgc ggcgctctgg ttcctggtgg ccgaccgctg gatgcggaac
     3121 gtggtcccgg cgcgctggcc ccggctcgcg gcctccttcg cgggcgtgct ggtgagcgcc
     3181 accgtgtgga ccgtgtggaa ccagtccacg gtgaacgaga aggtctacac cgtctccatg
     3241 ctctcgaccg ccctggtcat gtggctgggc gtgcactggg ccgatgacga ccagggcgag
     3301 catcgcgacc gctacctgat cctcatcgcc tacgtgctgg cgctgagttc gaccaaccac
     3361 ctgatgggcg tgctggccgc gccggcggtg gcggtgtatg tcctcgcgac cgagcctggg
     3421 atgctgctca agccctgggt gctctggctc gccgttaccc tgggcctcgc cgtctcgggc
     3481 aaatggaccg tactcgtaag cggtgagcct gctgagcagg ccgtggtg
//
LOCUS       DATIFF010000496         1740 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2065010, whole genome shotgun sequence.
ACCESSION   DATIFF010000496 DATIFF010000000
VERSION     DATIFF010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2065010"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..442
                     /locus_tag="VLD58_07375"
     CDS             <1..442
                     /locus_tag="VLD58_07375"
                     /inference="COORDINATES: protein motif:HMM:NF015909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polyphosphate kinase 2 family protein"
                     /protein_id="HSB54160.1"
                     /translation="YEDVLVVRVHELVPAAVWGARYEQINGFERHLTETGTTILKFCL
                     HISREEQRKRLLARLADPHKNWKFNANDPRERQLWDRYTEAYRDALARTSTAWAPWYV
                     VPADRKPVRDLLVAEVVLETLERMKPAYPPVPGEVAQFRTLLEG"
     gene            complement(446..916)
                     /locus_tag="VLD58_07380"
     CDS             complement(446..916)
                     /locus_tag="VLD58_07380"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HSB54161.1"
                     /translation="MSRRDRRGFTFVELMIVLLVITILAGMMVMRYIELKHRALAAQA
                     TSDMENVRLAAFTKFYDTGAWPSAPGPGVVPPELVPYLGNGFSFSRPEYKLEFENFVP
                     PGGGPSATYQIAIRFSSSNQALVNTMLQVVGDRAPYIVLGNDVAVVLVGPDGQT"
     gene            complement(913..1440)
                     /locus_tag="VLD58_07385"
     CDS             complement(913..1440)
                     /locus_tag="VLD58_07385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54162.1"
                     /translation="MPPAPRTGGAPGTPPKQALFDAAVEVMRKQSEERAAERAAEEAR
                     RREQSRVSPIIAGGLTILLAVGVYVAVEQPTWLFPPARPAESRETQEASLRIGMATTM
                     QRIERFRLMQGRLPRTLAEAGSSPSGITYEMREGDRYTLRGTNGPVELTLNSGDSLPV
                     FVGTSFRVLASRSHQ"
BASE COUNT          268 a          589 c          621 g          262 t
ORIGIN      
        1 ctacgaggac gttctcgtgg tccgggtgca cgagctggtg ccggcggcgg tctggggcgc
       61 gcgctatgag cagatcaacg gcttcgagcg gcacctgacg gagaccggca cgacgatcct
      121 caagttctgc ctgcacatct cccgggagga gcagcggaag cggctgctcg cccgcctggc
      181 cgacccccac aagaactgga agttcaacgc gaacgacccg cgggagcggc agctgtggga
      241 ccggtacacc gaggcctacc gggacgcgct ggcgcgcacc agcaccgcgt gggcgccgtg
      301 gtacgtcgtg ccggcggacc ggaagccggt ccgggacctg ctggtcgcgg aggtggtgct
      361 ggagacgctg gagcggatga agccggccta tcccccggtg ccgggggagg tggcccagtt
      421 caggacgttg ctggagggat gagcgtcagg tttggccgtc gggcccgact aggactaccg
      481 ccacgtcgtt cccgagcacg atgtacggcg cccggtcgcc cacgacctgg agcatggtgt
      541 tgaccagggc ctggttgctg gaggagaacc ggatcgcgat ctggtacgtc gcgctcggcc
      601 ccccgccggg cgggacgaag ttctcgaact ccagcttgta ctccggcctg gagaagctga
      661 agccgttgcc gagataggga accagctccg gcggcacgac gcccggccct ggcgcgctgg
      721 gccacgcgcc ggtgtcgtag aacttggtga aggcggcgag ccgcacgttc tccatgtcgg
      781 aggtggcctg cgcggcgagc gcgcggtgct tgagctcgat gtaccgcatg accatcatgc
      841 ccgcgaggat cgtgatcacc agcagcacga tcatcagctc gacgaaggtg aatccccggc
      901 ggtcccggcg gctcattggt gcgacctcga agcgagaacc cggaagctgg tccccacgaa
      961 gaccggcagg gagtcgccgg agttgagggt gagctcgacc ggcccgttgg tgccccgcag
     1021 cgtatagcga tcgccttccc gcatctcgta cgtgatcccc gagggactcg atccggcttc
     1081 ggccagcgtg cgcggcaggc ggccctgcat gagccggaac cgctcgatgc gctgcatggt
     1141 cgtcgccatg ccgatgcgga ggctcgcctc ctgggtctcc cgggattcgg ccggccgggc
     1201 gggcgggaag agccaggtgg gctgctccac tgcgacgtac acgcccaccg cgaggaggat
     1261 cgtgagcccg cccgcgatga tgggcgacac ccggctctgc tcccgccggc gcgcctcctc
     1321 ggccgcgcgc tccgccgcgc gctcttcgct ctgcttccgc atcacctcca cggcggcgtc
     1381 gaacagggcc tgcttgggag gcgtgccggg ggccccaccc gtgcgcgggg cgggtggcaa
     1441 ggcggaggag gaagctggac ctttttggtc ggccatgagt cgggtgacgg gcaataattg
     1501 aacggtcgga agtgcaagac tcaggccagt cgccagcccc tgctttgcgc ccgcaaccgc
     1561 cagccccgca cgcggttcag cccgaccggc tccaacgcga ctagcagaat gagcggcggc
     1621 ggtgcgcttc gcgtcgttga gattgcctct cgaaagcgct acgattccgc cctgccggaa
     1681 gccaccaccg cctcgccccc gtacgcccga gtcctcccat gtcggtagcc ccggctgatc
//
LOCUS       DATIFF010000497         1990 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1295467, whole genome shotgun sequence.
ACCESSION   DATIFF010000497 DATIFF010000000
VERSION     DATIFF010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1990
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1295467"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..733
                     /locus_tag="VLD58_07390"
     CDS             <1..733
                     /locus_tag="VLD58_07390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HSB54163.1"
                     /translation="MHRWRLDLSAEPTKLLVMESRGHVRWPKRYRNEFGQLIEGAPYS
                     ERDIRRPSMLRTHDERGDFPILVKQYDGLNEIILDHHPFDVVGWDGYFYPWAFNIYDF
                     EPIVGRVHQPPPVHQTFQGDGFVVCSFCPRPYDFHPEAVPAPYNHSNVDSDEVLYYAS
                     SEFMSRKGIEFGSITHHPDGIPHGPHPGRAEASIGAKYTDELAVMMDSFRPLKVAAAA
                     TAIEDPNYHKSWLDAQHAQFNPPTS"
     gene            750..>1990
                     /locus_tag="VLD58_07395"
     CDS             750..>1990
                     /locus_tag="VLD58_07395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSB54164.1"
                     /translation="MTRPIWSPSPDRIARAQMTRFLAHVRARRPSGADEITDFPSLYA
                     WSVERPDAFWPEVWRYCGVVADERPGRDPWDRVVVGLERMAPPDPDLGPRWFPGARLN
                     FAENLLRYGDDREALVFWNEQGSGKRLTYAALRHEVAAAAAGLRAAGVGTGDRVAGFL
                     PNLPETVVAMLAAASLGAVWSSCSPDFGANGVLDRFGQIRPKVLICADGYRYAGKAID
                     SLARVREVQARLPGIERLVIVPYLHARPDLSGLPRAERWDDFLAPHRRETVPAFVRLP
                     FDHPLYIMYSSGTTGLPKCMVHGAGGTLLQHLKELVLHTDLGREDRLFYFTTCGWMMW
                     NWLVSGLAAGATVVLYDGAPLTPPAVLWDMAADEGVSIFGTSAKYLALAEKAGLEPMR
                     THDLRSLRAILSTGSPLAGHS"
BASE COUNT          302 a          699 c          685 g          304 t
ORIGIN      
        1 catgcaccgc tggcggctcg atctctcggc cgagccgacc aagctgctgg tcatggagag
       61 ccgcggacac gtgcgctggc ccaagcggta ccgcaacgag ttcggccagc tgatcgaggg
      121 cgcgccctac agcgagcgcg acatccgccg tccctcgatg ctgcggacgc acgacgagcg
      181 cggcgacttc ccgattctcg tgaagcagta cgacggcctg aacgagatca tcctggacca
      241 tcacccgttc gacgtggtgg ggtgggacgg gtacttctac ccatgggcgt tcaacatcta
      301 cgacttcgag ccgatcgtgg gccgggtgca ccagccgccg ccggtgcatc agaccttcca
      361 gggggacggg ttcgtggtgt gtagcttctg cccgcggccg tacgacttcc accccgaagc
      421 cgtgcccgcg ccgtacaacc acagcaacgt ggactcggac gaagtgctct actacgcctc
      481 gagcgagttc atgagccgca agggcatcga gttcgggagc atcacccacc atccggacgg
      541 catcccgcac gggccgcatc ccggccgggc ggaagcgagc atcggcgcca agtacaccga
      601 cgagctggcc gtcatgatgg acagcttccg gccgctcaag gtggccgccg ccgcgaccgc
      661 catcgaggat cccaactacc acaagtcctg gctggacgca cagcacgcgc agttcaaccc
      721 gccgacgagc tgatcgtcgg cgggctccga tgacccgacc catctggagt ccgtcccccg
      781 accgcatcgc cagggcgcag atgacgcgat tcctggcgca cgtgcgtgcg cgccggccga
      841 gcggtgcgga cgagatcacg gacttcccct cgctctatgc ctggtcggtg gagcgcccgg
      901 acgcgttctg gccggaggtg tggcggtact gcggcgtcgt ggccgacgag cgcccgggcc
      961 gcgatccgtg ggatagggtg gtggtcgggc tcgagcggat ggcgcccccg gaccccgatc
     1021 tcgggccgcg ctggttcccc ggcgcccggc tcaactttgc cgagaacctg ctgcgctacg
     1081 gggacgaccg cgaagcgctc gtgttctgga atgagcaagg cagcggcaag cggctcacct
     1141 acgccgccct ccgccacgag gtggcggccg cggcggccgg cctgcgtgca gccggcgtgg
     1201 gcaccggcga ccgcgtcgcg gggttccttc cgaacctgcc cgagacggtc gtggccatgc
     1261 tggcggcggc gagcctcggg gcggtgtggt cgtcctgctc ccccgatttc ggggccaacg
     1321 gcgtgctcga ccgattcggc cagatccggc cgaaggtgtt gatctgcgcc gacggttacc
     1381 gctacgcggg gaaggcgatc gactcgctgg cccgggtgcg ggaggtacag gcgcgcctgc
     1441 cgggaatcga gcggctcgtg atcgtcccct acctgcacgc acgtccggac ctgtccggac
     1501 tcccccgggc ggagcgctgg gacgacttcc tggccccgca ccggcgcgag accgtccccg
     1561 ccttcgtccg cctgccattc gaccacccgc tctacatcat gtacagctcg ggcacgacgg
     1621 ggctcccgaa gtgcatggtg cacggggccg gcgggacgct gctgcagcat ctcaaggagc
     1681 tggtgctgca taccgatctc ggacgcgagg accggctctt ctactttacc acctgcgggt
     1741 ggatgatgtg gaactggctg gtctcgggcc tcgccgcggg cgccacggtg gtgttgtacg
     1801 acggtgcccc gctcactccg ccggcggtgc tctgggacat ggccgccgac gaaggcgtca
     1861 gcatcttcgg gacgagcgcc aagtacctgg ccctggcgga gaaggcgggg ctcgagccga
     1921 tgcgcaccca tgacctccgc tcgctgcgcg cgatactctc gaccggaagc ccgctcgcag
     1981 ggcacagcta
//
LOCUS       DATIFF010000498         1283 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1449095, whole genome shotgun sequence.
ACCESSION   DATIFF010000498 DATIFF010000000
VERSION     DATIFF010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1283
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1449095"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..357
                     /locus_tag="VLD58_07400"
     CDS             <1..357
                     /locus_tag="VLD58_07400"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSB54165.1"
                     /translation="ELTPASVRTWVRSHPRARFVITCADREFIEQVHFGATPEEAARI
                     WWDISWVWGPPEEHLALLLATMGGSRFLFGSGQPLRLAETPLARLDLLDLPPADLRAI
                     LTDNATTLASRTPAAP"
     gene            354..683
                     /locus_tag="VLD58_07405"
     CDS             354..683
                     /locus_tag="VLD58_07405"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSB54166.1"
                     /translation="MMDQPRRHARLSFSGRPAPRLETDAKSYEVIDLSPDGIRFRSTS
                     AVLITIGEVLRGTLLFPANRAVEVAGRVLRVSGAEAAVLLDEGMDHLARPVPMGAALP
                     RRTGLLW"
     gene            691..1023
                     /locus_tag="VLD58_07410"
     CDS             691..1023
                     /locus_tag="VLD58_07410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSB54167.1"
                     /translation="MSWVHNREYYRITYPTTLRPKLLVQGHTFEVVDLCERGIRFRLG
                     DAIPPDVGYEVAGTVRFRRGETVEVRGTILRLNDGEVAARLDAGIPLRAIMEEQRFLL
                     DRRRHLSS"
     gene            1025..>1283
                     /locus_tag="VLD58_07415"
     CDS             1025..>1283
                     /locus_tag="VLD58_07415"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSB54168.1"
                     /translation="MGTTADIAVVGLGAAGSAILEALARRGVRAVGLDQFHPPHHFGS
                     THGRSRVIREAYYESPVYVPLVQRAYQEWDRLARESGRHLLT"
BASE COUNT          179 a          467 c          429 g          208 t
ORIGIN      
        1 gagctcaccc ccgcctcggt ccgcacctgg gtgcgctccc atccccgggc ccggttcgtg
       61 atcacctgtg ccgaccggga gttcatcgag caggtccact tcggcgccac cccggaggaa
      121 gccgcccgga tctggtggga catttcctgg gtctgggggc cgccggaaga gcacctggcg
      181 ctgctgcttg ccacgatggg cgggtcccgc ttccttttcg ggagcggtca gccgcttcgg
      241 ctggcggaaa ccccgctggc ccggctggat ctgctggatc tgccaccagc cgacctgcgc
      301 gcgattctga ccgacaacgc caccacactc gcatcgagga caccggctgc cccatgatgg
      361 atcagcctcg ccgccatgca cgcctcagct tcagcgggcg ccccgcgcct cggctggaga
      421 ctgacgcgaa gagttacgag gtcatcgacc tttcgcccga cgggatccgg ttccggagca
      481 cgagcgcggt gctgatcacg atcggcgagg tgctgcgtgg cacactcctg ttccccgcca
      541 accgggccgt ggaagtggcc ggccgggtgc tccgggtctc cggcgcggaa gccgcggtcc
      601 tcctcgacga agggatggat cacctggctc ggccggtccc gatgggcgcc gccttgccgc
      661 gccgcaccgg cctcctctgg tagacggtcc atgagctggg ttcacaaccg cgagtactac
      721 cggattacct accccaccac cctgcggccc aagctgctgg tgcagggcca caccttcgag
      781 gtggtggacc tctgcgagcg cggcatccgc ttccggctgg gcgatgcgat tccgcccgac
      841 gtgggctacg aggtggccgg gacggtgcgc ttccgccggg gcgaaaccgt cgaggtgcgc
      901 ggaacgattc tccgcctcaa cgatggcgag gtcgcggccc ggctcgatgc cggcatccct
      961 ctccgcgcca tcatggaaga gcagcgcttc ctcctcgacc gccgccggca cctcagcagc
     1021 tgagatgggc acgaccgccg atatcgcggt cgtggggctg ggcgccgccg gcagcgccat
     1081 cctcgaagcg ttggcccggc gcggcgtcag ggctgtcggc ctggaccagt ttcatccccc
     1141 ccatcacttc ggttcgaccc atggacgctc ccgcgtgatc cgcgaggcgt actacgagtc
     1201 gccggtgtat gtcccgctgg tgcagcgggc ctaccaggaa tgggaccggc tcgcgcggga
     1261 gagcggacgg catctcctca ccc
//
LOCUS       DATIFF010000499         1545 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2217884, whole genome shotgun sequence.
ACCESSION   DATIFF010000499 DATIFF010000000
VERSION     DATIFF010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1545
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2217884"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..346
                     /locus_tag="VLD58_07420"
     CDS             <1..346
                     /locus_tag="VLD58_07420"
                     /inference="COORDINATES: protein motif:HMM:NF012550.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HSB54169.1"
                     /translation="VVKGRRVSSSVRAMVVPGSMQVKAQAEREGLDRIFQEAGFEWRN
                     AGCSMCLGMNPDILAPGERCAATSNRNFEGRQGKGGRTHLMSPTMAAAAAITGCLTDV
                     RNWEYADEPVLV"
     gene            350..964
                     /gene="leuD"
                     /locus_tag="VLD58_07425"
     CDS             350..964
                     /gene="leuD"
                     /locus_tag="VLD58_07425"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: protein motif:HMM:NF002458.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HSB54170.1"
                     /translation="MQAFTTHTGIVAALDRANVDTDQIIPKQFLKRVERTGFGPALFF
                     DWRYLPDGSPNPDFALNQPRAAGATILLAGANFGCGSSREHAPWALGEYGFRAVIAES
                     FADIFFSNCCQNGILPVRLTGEEIRELFRRAGSGAGPYRLTIDLESNRVSDEQGFSAT
                     FTLDAYRRESLLRGLDEIGRTLLHETEIAAFEHRRAVRLAQLEA"
     gene            961..>1545
                     /locus_tag="VLD58_07430"
     CDS             961..>1545
                     /locus_tag="VLD58_07430"
                     /inference="COORDINATES: protein motif:HMM:NF012407.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HSB54171.1"
                     /translation="MTTHHIAVLPGDGIGPEVVAAALQVLGAVAGRFPIRFRLSEYPI
                     GGAAVASHQDPFPAVTRDAVKQADAVLLGAVGDPSLDNAPRHLKPETGLLALRASLGV
                     YSNLRPVAVHPALSDISPLRSERLTGVDLVIVRELTGGLYYGEPRSNDGTTAVNTLRY
                     TRTEIERIARLGFELARGRRKKVLSVDKANVLETS"
BASE COUNT          246 a          555 c          496 g          248 t
ORIGIN      
        1 ggtggtaaag gggcggcggg tctcctcgtc ggtgcgcgcc atggtcgttc ccggctcgat
       61 gcaggtgaag gcccaggcgg agcgggaggg cctcgaccgc atcttccagg aggcgggctt
      121 cgagtggcgc aatgccggct gctcgatgtg cctcgggatg aaccccgata tcctcgcacc
      181 tggggagcgc tgcgccgcca cgtctaaccg caacttcgaa ggacggcagg gcaagggcgg
      241 acgcacccat ctcatgagtc ccaccatggc ggccgccgcg gccatcaccg gctgcctcac
      301 cgatgtgcgc aactgggaat acgccgatga accggtgctg gtctgagtga tgcaagcctt
      361 cacgacccac accggcatcg tcgcggcgct cgaccgggcc aacgtcgaca ccgatcagat
      421 catccccaag cagttcctga agcgggtgga gcgcaccggc ttcgggccgg cgctcttctt
      481 cgactggcgc tacctgccgg acgggtcacc caatccggat ttcgcgctca accagccacg
      541 ggcagcgggc gccacgatcc tcctggcggg agccaatttc gggtgcggct cttcccgcga
      601 gcatgctccg tgggccctcg gagagtacgg cttccgcgcc gtcatcgctg aatcattcgc
      661 cgatatcttc ttcagcaact gctgccagaa cggaatcctc ccggtgcgtc tcaccggcga
      721 ggagatccgg gaactctttc gccgggccgg cagcggagcc ggcccctatc ggctcaccat
      781 cgacctggag tcgaaccggg tctccgacga gcagggattc agcgcgacct tcaccctcga
      841 tgcctatcgc cgcgagtcgc tgcttcgggg actcgacgag atcgggcgca ccctcctcca
      901 cgaaaccgag atcgccgcat tcgagcaccg gagagcggtg cgactggccc agctcgaggc
      961 atgaccactc accacatcgc tgtacttccg ggagacggca tcgggcctga agtcgtggcc
     1021 gccgccctcc aggtactggg cgctgtcgcc gggcgcttcc cgattcgttt ccgtctcagc
     1081 gaatacccca tcggcggcgc cgcggtggcc agtcaccagg accccttccc cgcggtcacg
     1141 cgcgacgcgg tgaagcaggc cgacgcggtg ctgctcggcg ccgtgggcga tccttccctc
     1201 gacaacgccc cgcggcatct caaacccgag accggtctcc tggcgctccg cgcctcgctc
     1261 ggggtctact ccaatctccg cccggtcgcg gtgcaccccg cgctgtcgga catctcaccg
     1321 ctccgctcgg agcggctcac cggggtcgac ctggtcatcg tgcgggagct gacgggcggg
     1381 ctctactacg gcgagccgcg gagcaatgat ggcaccaccg ccgtcaatac cctgcgctac
     1441 acccggaccg agatcgaacg catcgcgcgg ctcggcttcg agctggcgcg gggtcgccgg
     1501 aagaaggtgc tctcggtcga caaggccaac gtgctggaga cctcc
//
LOCUS       DATIFF010000500         1087 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1142544, whole genome shotgun sequence.
ACCESSION   DATIFF010000500 DATIFF010000000
VERSION     DATIFF010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1087
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1142544"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..396
                     /locus_tag="VLD58_07435"
     CDS             <1..396
                     /locus_tag="VLD58_07435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54172.1"
                     /translation="ELESAGPLVTRGAMTLLETLPVDTRRRLSRARQVLEKLESELTR
                     LDQRDRELDGAATEARSGGPTLAGGSGDRQRALLSELDQARRDNGERRMALLTGIENV
                     RLALLRVKSGIGTPEDADRELAEAARIPG"
     gene            393..>1087
                     /locus_tag="VLD58_07440"
     CDS             393..>1087
                     /locus_tag="VLD58_07440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54173.1"
                     /translation="MNPHATVVRPGQGSGAGGSSSSALPTDLLSQAATRLRILALLYA
                     AVFFLAGVLPMLVVPNDRVLLFSTPIQWVPPLSAIGFALLVAGLIGSRRLSPSAVTRV
                     GLIFEVGSSYAIAVAEQIDARGFMPVAVPIYSGLSWVAVWIMLFTIVVPAAPRRALLA
                     ALAAVSAVPVSHLILASQNLTLLRLDPGQFFFWAILPYLLSVGMAYVGARVVYALGSE
                     IKRARELGSYQLE"
BASE COUNT          139 a          386 c          376 g          186 t
ORIGIN      
        1 gagctcgagt ccgccggccc cttggtcacc cgcggcgcga tgacactcct cgagacccta
       61 cccgtcgaca ctcggcgacg cctttcccgg gcgcggcagg tgctggagaa gctcgaaagc
      121 gaactcactc ggctcgacca gcgcgatcgt gagctggacg gcgcggcgac cgaggcgcgc
      181 agtggcggcc cgacgctggc cggcggttcg ggcgaccggc agcgtgcgct gctgagtgag
      241 ctggatcaag cccggcgcga caatggcgag cgccggatgg cgttgttgac cgggatcgag
      301 aacgtgcggc tggcgcttct gcgggtgaag agcgggatcg gcacccccga ggacgccgac
      361 cgggagctgg ccgaagcggc ccggatcccc ggatgaaccc acacgccacc gtcgtccggc
      421 cgggccaggg gagcggcgcc ggcggatcga gctcctctgc ccttccgacc gatctgctga
      481 gccaggccgc gaccaggctc cgcatcctgg ccctgctcta cgccgctgtc ttcttcctcg
      541 ccggcgtcct cccgatgctg gtcgtgccga acgaccgggt cctgctcttc agcaccccga
      601 ttcagtgggt gccgccgctt tccgccatcg ggttcgccct gctggtcgcc gggctgatcg
      661 gcagccgacg gctctccccc tccgccgtga cgcgggtcgg gctcatcttc gaggtcgggt
      721 ccagctacgc cattgcggtc gccgagcaga tcgacgcccg ggggttcatg ccggtagcgg
      781 tgccgatcta ttcgggcctc tcctgggtgg ccgtctggat catgctgttc acgatcgtcg
      841 tgcccgctgc gccccgccgg gcgttgctgg cggcgctggc tgccgtcagc gcagtaccgg
      901 tctcccacct gatcctggca tcccagaacc tcacgctgct gcgtctcgac ccggggcagt
      961 tcttcttctg ggcgatcctg ccgtacttgc tctcggtggg aatggcctat gtcggagcgc
     1021 gagtggtcta cgccctcggc agcgagatca agcgggcccg cgagctgggc agctatcagc
     1081 tggagga
//
LOCUS       DATIFF010000501        14317 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_219284, whole genome shotgun sequence.
ACCESSION   DATIFF010000501 DATIFF010000000
VERSION     DATIFF010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 14317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14317
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_219284"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(143..1711)
                     /locus_tag="VLD58_07445"
     CDS             complement(143..1711)
                     /locus_tag="VLD58_07445"
                     /inference="COORDINATES: protein motif:HMM:NF017669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HSB54174.1"
                     /translation="MAPTFSDQLQAGYGFSGKSVILGAALQGQQVFQEPKIRIPLAMM
                     NRHGLVAGATGTGKTKTLQLLTEQLSAAGVPVFVADIKGDLSGLAMPGQPSDRVSQRA
                     SDVGYQWNPAGVPVEFVSLTGQLGVQLRATVASFGPLLLAKVLDLNETQTSVLTLVFK
                     YCDDARLPLLDFSDLRAVLQYLTGPEGKDALAGLGGMSAATVGVLLRKMVELEMQGAD
                     KFFGEPEFDVRDLLATTRDGKGVVTCLELSDVQDKPKLFSTFMMWMLAELFQNLPEAG
                     DLDQPKLAFFFDEAHLLFNDASKAFLEQVEQVVRLIRSKGVGVYFVTQTPKDVPTDVL
                     AQLSNRVQHALRAHTPDDEVALKATVRTFPRTDFYDLNQTLTSLGIGEAVITVLDPRG
                     VPTPVVAARLIPPASRMAPLTPEELQADVRQSDLLAEYGKTIDRESAREMLASRLAPP
                     PSPMGPGPASAPQQGPSSGGGRGGMSTGAKIGTAVVAALGTTVARTVGRELVRGVLGM
                     LTGKSPRGTSRTRW"
     gene            complement(1752..2960)
                     /locus_tag="VLD58_07450"
     CDS             complement(1752..2960)
                     /locus_tag="VLD58_07450"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HSB54175.1"
                     /translation="MSRSARIGASLEVDPGDAAPAPATYDVAALRAAEFPWAGETVYL
                     DHASIGPLPERTRRTIGVMADKRARPFDIKAADQFGGLARARSLAGRLINADPGEIAL
                     ATNTTFGLALAAGALPWKAGDIVLVSEREFPANVYPWKRLEARGVHLELVPTTAEGWP
                     DEARLLERLEDPRVRCLALSLTQFASGYTADVARFSAVTRQRGQFLVLDAIQGLGQLP
                     FDVRKTPVDILSSGAQKWLLSPWGSGFLYVRKELIETLEPTMVSWMSFEGTDDFTTLC
                     HYRDELRHDARRFELITLPFQDFVAMNESLDLLLQLGIPAIQRHLATLQDRLVGWARD
                     RGVPVASPTDRHRSGITCLAPPDIANVHRALRDAKIFCSLREGAIRISPHCYNTLEDI
                     ERVIEVLESK"
     gene            3064..4155
                     /locus_tag="VLD58_07455"
     CDS             3064..4155
                     /locus_tag="VLD58_07455"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HSB54176.1"
                     /translation="MSFTSPFTLVFSGGGLKGLAHIGVLRALEERGLIPSAVIGSSMG
                     SLVAAAWATGMSLKEMTDRALAVRRRDIFQVAHTDMAFKRMRAPAVYRKEPLDHLIHS
                     LVGDVTFHDLPRRLLINTVELNSGMQIFWGLPGLRNARVADAVFASCALPGIFPPREI
                     QGRWFVDGAVTENLPVHVAASHGEGPVMAVDVGSTSAVRSDVQDEGFAATYIRGLEIV
                     MQTIMESKLRRWTSPPLVLVQPRVEHVSMFGFGHNRELIEEGYRATLDLLDALKDFDP
                     QGSGIYPQRRVQIRVDSERCIGCGSCVMHAPWVFELDQAGKAHVIQAVQAWSPIDGAY
                     VRNCPTYAISARLAPPSRHDGTGTPPTPA"
     gene            complement(4091..6388)
                     /locus_tag="VLD58_07460"
     CDS             complement(4091..6388)
                     /locus_tag="VLD58_07460"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSB54177.1"
                     /translation="MDKPEPMRVLITLHQGGGAGAVNSTLHLALGLVARGVHVRLVCP
                     PGSWVEGEAKRGGLEVHPVELVSRRRWPNARKLLEVIHRHPVDLINAQSSRDREALTF
                     LALMGRLSVPLVFTRRSWPRTTRLETWLANRAADRVIALSEPVRAELERQGFGAEKLV
                     VVHNGVLTDRIDRPVNEEEVDAWRRRIGWEPGRRTVGIVARHKDQQVVLAALARVETP
                     VRLVLSGLSPEALALPLPAIPERHAVVRLPFDPEVRPLYDLLEVALHPSRWDALPQAV
                     LEAMALGKPVIASRATGNEVIIRHGLDGLLAAPDDPSDWARQLESLLADPQLAARLGA
                     AACRRAREDFSLEEMFDRTLAVYRSLVRGSVAPLGMTASSQLLLAYDFPPRGGGIARA
                     LGEIVRHSHAELEVCTGRISGDEEWDGASGLPITRAPVSAERLRTLGGLIQWGRAADR
                     VIRARRPAFIWAGNLKPAGHVARWLGATRRIPYGLIVYGLDLAIVSEQARRSARKRRR
                     VRMLFRDAAGIVACSEWTAGRCRALLDQLGLGGVAGLIRVIPLGADPRRFSPDGRRYP
                     LPQGRWLLTVARLVPHKGVDTGIRALASLHERFPDLQYAVAGTGPDRERLAALATDLG
                     VSDRLVFLGPVPDEDLPSLYRSATVYLGLSRESGNEVEGFGLSLVEAQASGCPVIAVK
                     SGGVPDAVADGESGILVPPSDAAAAARAIAALLEDDGRRAALGAAGRRRVEERLNWER
                     VVAELRQASEEFRSRRAATVGPGGR"
     gene            6387..7343
                     /locus_tag="VLD58_07465"
     CDS             6387..7343
                     /locus_tag="VLD58_07465"
                     /inference="COORDINATES: protein motif:HMM:NF024914.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB54178.1"
                     /translation="MRILIVGAGGAYRTEISIARAAESLGHQATVLDALGWRRRLGPL
                     AGPWLRSRADAFRPDYILCTRHAIAAGARTIGRMVKGRESAFWYFDGISPLPPRATEL
                     ARLVSRTFATTGFETDAFAALGLESHFLPQGMDPGIDQPAATAPAAFQCEVSFVGSGQ
                     YRRRLALLEQMARRFRLQIRGPGWENVPASLPFHGGRVDGIAFAQVVRGAAISLGIDA
                     LEEQRQERRGGTSNRLWKVLGAGGLYLGEHVPGIEEFARNGEHAVWYRSNEEALAQAG
                     ELLRDPERRARIAAAGRAHVLARHTYRHRLELLLRGQGYTST"
     gene            complement(7328..8185)
                     /locus_tag="VLD58_07470"
     CDS             complement(7328..8185)
                     /locus_tag="VLD58_07470"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB54179.1"
                     /translation="MRIVGCTLVADALTLEFPVLEAIGSVLPLCDQLIVNVGPSSDGT
                     LDRIQQLSDPRIRIIQGEWNRGLGSAMLAVETQRALDLARGDWAIYIQADEILHEDGL
                     VPFRDALERADADPRIEGLLVDFVHFYGTTDWVGTSRRWYRREVRAVRVAAGLKSRGD
                     AQGFRAADGRRVRARASGARYFHYGWARPLEALRRKQVVDDQLYHAGAGRRAPIREQL
                     PADVGLRPFRGTHPAIMDRWIAEHRPRMTPGFTPRSWDARRLSLLATLAVERLTGWRP
                     FEYRNYVEV"
     gene            8215..9147
                     /locus_tag="VLD58_07475"
     CDS             8215..9147
                     /locus_tag="VLD58_07475"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB54180.1"
                     /translation="MRVAVVHHTRLPVKGYGGTERVVVALVRGLAALGHEVSLVAPVG
                     TKVPEAQLAPVPADRFKDVTFDVSSFVPAGTELVHFFYPPRVSPSFPWLWTLEGTTPA
                     GVTRPPNTIFVSQSHAGHHQSRSFVYNGLDPADYIFHAKKDSFDLFLGRLHSSKGWQL
                     AVEGAKASQRRLVVAGGWRPSLSRFIRFAGEVDGKEKAELLAGARLLWMPAQWEEPFG
                     LTLIEALFSGTPVLGTRRGALPEVLSPAVAEFGETVEELVSRLPEMAKKDPEACRSRA
                     TRYFSHTAMAEEYVRFYRHYLATGVLPEGVRSVD"
     gene            complement(9413..10399)
                     /locus_tag="VLD58_07480"
     CDS             complement(9413..10399)
                     /locus_tag="VLD58_07480"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024914.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB54181.1"
                     /translation="MTAPYTGLRVLLVAHFDEGEFAHNALRQRALERLGCSVNALDPE
                     KAGWIERLVRRDIDQRVRAALDQQPTDLVLVAGNGLLPPDAATELRRGHPAKWVQLLD
                     EDIGKPDEASREAMAYDHIFIGSSGGLTRLQRYGILHGHYLALGCDPSVHKPLRARGV
                     FRANVVFAGAASSRRERLLTELVEFGLALWGPGWRRTGLKDYCRGELPSHEDFVRAYA
                     GATVAVNVHRTGPDDRNGDPTGVNRRTFELAAIGVAQVVDARADLPQHFEDGSEVLLY
                     NTPEELKGQVKRAVQDDKYRERLAGNARQRAIRHHTYMHRMAELLGVVTGSA"
     gene            complement(10418..12307)
                     /locus_tag="VLD58_07485"
     CDS             complement(10418..12307)
                     /locus_tag="VLD58_07485"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB54182.1"
                     /translation="MAELSFRRTGRRLLDWLAPYRWTLAGGIVATSVASVLDGVTLLF
                     LIPLLRHLFGSAGGLAAGDTRLEHAVDQVLRPFLGTDPAGITVRLVLLLWVTLLLKNL
                     LAWIASQLSVLSQEGLVRDLRSALFEHLLRLDLGWLERTRGGQVIARVMQDADQTKVA
                     ISAGLASFFQNLVLILTTLVVLAQLSWQLTLLTLSAAPLLLIGIRYLLRRLRQHARAR
                     AEEAGEMTATVAERLGATKLIRAYGGEREEVARFHDQAERYRARVARTQRLATLSSPV
                     SEIFGGMLLVALIAVGASPDVLGSGALSPEALLVFIVAALRVMAPLKAITQFPSQMSL
                     ALAGADRVFEILDLPSAEQEAAGLPAARFGREVRYEGVWFSYLEGSEDFVLRDIGFTL
                     ERGRTVALVGPSGAGKTTLAELLPRLREPSRGRILIDGVPITEVSRASLRSLLGFVGQ
                     ETVLFNATVRANIAYGRPGASDADIEAAARAANAHGFIAELPQGYDTLLGERGTRLSG
                     GQRQRVAIARAVLRDPPILILDEATSALDSESERLVQDALTRLMQDRTVLVIAHRLAT
                     VRHADEILVLADGEIVERGTHEGLLAEGGTYARLVRGSEFRRSEAGPPDALAAPELGS
                     RNAPV"
     gene            complement(12300..13868)
                     /locus_tag="VLD58_07490"
     CDS             complement(12300..13868)
                     /locus_tag="VLD58_07490"
                     /inference="COORDINATES: protein motif:HMM:NF020249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB54183.1"
                     /translation="MPRPRSILWVDDEVESLSSHILFLEEQGFSVEKAAHGDDALVLL
                     QRQPYGVVLLDEQMPGRRGLDLFRAIRTIDATMPVVMVTKSEEPTTLKDAIGAEISDY
                     LVKPVNPRQVFSVVTRLLEGDRIRQQRLSRDFATRFRELEARRSAALNWRDWTELVVE
                     LAEWEVRLGHAEEPGLQEALRSLQISLRQDFARFIEQRYAGWLAGARADRPPLSVDIV
                     PEFVEPALRQHGRALLIVVDCLRLDQWEAIRPLISTRFEVETSYYYSILPTATPFARN
                     AIFSGLLPRVLASRYPNWWRDQDETSLNMHEHELLARQLEERNGSPVPVRYEKVFTAT
                     DGEALLNRLPAHLAAEGVTALVFNFIDQLTHGRTENSTLYEVARDTPALRSLTRTWFE
                     RSALWAALREAERRNVPVLLTTDHGSIHCHTPATVYARRDATSNLRYKFGEDLRAQER
                     DAALVVEDLGSFGLPPRPPGVRLLLATGDRFFVYPTKLREYQARYRGAFLHGGVTPEE
                     MVLPIALLTARRGG"
     gene            13907..>14317
                     /locus_tag="VLD58_07495"
     CDS             13907..>14317
                     /locus_tag="VLD58_07495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54184.1"
                     /translation="MSPPRILLVRFSSLGDVLLTTPLIRALRARHPAATITVLTKQVW
                     APLLSANTHLDQVVTLAPGQSLVPLARALRRANFTDRLDLHASVRTRVLRLLVPGAWH
                     GYNTRRRERRALITLKQDHYRDHLPVPERYFEAAR"
BASE COUNT         2247 a         4937 c         4941 g         2192 t
ORIGIN      
        1 gtgttcctgt tcgccaagaa ggtgctgaaa gaggagacgg tggcgaagaa ataggctgga
       61 ggccggaggc aggaggccgg cgcaggctgg aggtcaggcc cgcgttactc cggcctccgc
      121 cagcctccgg ccaacggccc ctctaccacc tcgtccgact cgtcccccgc ggcgacttcc
      181 ccgtcagcat tcccagcacc ccccgcacca gttcccggcc caccgtgcgc gccaccgtgg
      241 ttccgagtgc agccaccacc gcagtcccga tcttggctcc ggtcgacatc ccgccccggc
      301 cgccacccga cgacggcccc tgctgcggcg ccgaagctgg accgggtccc atcggcgagg
      361 gaggcggggc cagccgagac gcgagcatct cccgcgcact ctcgcgatcg atcgtcttgc
      421 cgtactccgc cagcaggtcc gactgacgga cgtcggcctg gagttcctcc ggcgtgagcg
      481 gggccatccg cgaagcgggc ggaatcaggc gtgcggccac caccggggtc gggacgccac
      541 gcggatcgag gacggtgatc accgcctcgc cgatacccag cgacgtgagc gtctggttga
      601 gatcgtagaa gtcggtacgc gggaaggtcc gcaccgtggc cttgagcgcc acctcgtcgt
      661 ccggggtgtg ggcccggagc gcgtgctgca cccggttgga gagctgcgcc agcacgtcgg
      721 tggggacgtc cttgggagtc tgggtgacga agtagacacc cacgcccttg gagcgaatca
      781 gccggactac ctgctccacc tgttccagaa acgccttgga cgcgtcgttg aagaggaggt
      841 gcgcctcgtc gaagaagaat gccagcttcg gctgatcgag atcgcccgcc tcgggcaggt
      901 tctggaagag ctcggccagc atccacatca tgaacgtgga gaacagcttc ggcttgtcct
      961 gcacatcgga gagctcgagg caggtcacca cccctttacc gtcacgggtg gtcgccagca
     1021 ggtcccgcac atcgaattcc ggctcgccga agaacttgtc ggccccctgc atctccagtt
     1081 ccaccatctt gcggagcagg acgccgaccg tcgcggccga catcccaccc agccccgcca
     1141 gcgcgtcctt cccttcgggg cccgtgagat actgcagcac cgcccggaga tcgctgaaat
     1201 cgagcagtgg gaggcgggcg tcgtcgcagt acttgaagac cagggtcagc acgctcgtct
     1261 gggtctcgtt gagatccagc accttggcca ggagcagcgg gccaaagctc gccacggtgg
     1321 cgcggagttg caccccgagc tggccggtca ggctcacgaa ttcgaccgga acgccggctg
     1381 ggttccactg gtatcccaca tcggatgcgc gctggctcac ccggtcgctc ggctgccccg
     1441 gcatggcgag cccggagaga tcgcccttga tgtcggccac gaagaccgga acgcccgcgg
     1501 ccgagagctg ctcggtgagg agctggaggg tcttggtctt gccggttcca gtcgcgcccg
     1561 cgaccagccc gtggcggttc atcatggcga gcggaatccg gatcttcggc tcctgaaaga
     1621 cctgctggcc ctgaagggcg gcgccaagga tgacagactt gccgctgaag ccgtagccgg
     1681 cctggagctg gtctgagaag gtgggggcca tgggcgtgcc tgtggatggt gtgcgggtgc
     1741 cgggtggcac cttacttcga ctcgagcacc tcgatgaccc gctcgatgtc ttcgagcgtg
     1801 ttgtagcaat gggggctgat ccggatcgcc ccctcccgga ggctgcagaa gatcttcgca
     1861 tcgcggagcg cccggtgcac gttggcgatg tccggtggcg ccaggcaggt gatgccggag
     1921 cggtgccgat cggtcgggga ggcgacggga acaccgcggt cccgggccca cccgaccaga
     1981 cgatcctgca gggtggcgag gtgccgctgg atggccggga tcccgagctg gagcagcagg
     2041 tccagcgact cgttcatcgc cacgaaatcc tggaacggca gggtgatcag ctcgaagcgc
     2101 cgggcatcgt gacgcagttc gtcgcgatag tggcagaggg tggtgaaatc gtcggtccct
     2161 tcgaaggaca tccagctcac catcgtgggc tcgagggtct cgatcagctc cttcctgaca
     2221 tacaggaatc cgcttcccca cggcgagagc agccacttct gggcgccgga ggacaggatg
     2281 tcgaccgggg tcttccgcac atcgaaggga agctggccca ggccctggat cgcgtcgagc
     2341 acgaggaact ggccccgctg ccgggtcacg gcggagaagc gcgccacatc ggcggtgtac
     2401 ccgctggcga actgggtcag ggagagcgcg aggcaacgca cccgcggatc ctcgagccgc
     2461 tcgagcaacc gcgcttcgtc cggccatcct tcggcggtgg tgggcaccag ctccaggtgc
     2521 acgccgcgcg cttccagccg cttccacggg tagacattgg cggggaactc gcgctcggac
     2581 acgagcacga tgtcgccggc cttccacggc agcgccccgg ccgcgagggc gaggccgaag
     2641 gtggtgttgg tcgccagcgc gatctcgccg ggatcggcgt tgatgagccg gcccgccagc
     2701 gaacgggccc gcgccaggcc accgaactga tcggccgcct tgatatcgaa agggcgagcc
     2761 cgcttgtcgg ccatcacgcc aatggtgcgg cgggtacgct ccggcagcgg gccgatgctg
     2821 gcgtgatcga ggtagaccgt ctcgccggcc caggggaatt cggcggcgcg gagcgcggcc
     2881 acatcgtagg tggcgggtgc cggggcggca tcgcccggat ccacctccag gctggccccg
     2941 attctggctg accgactcat gcgtgctccg tcaaattctg gtggccggta ccgcgattcg
     3001 gggcgttccc cggaccgacc ggcccgggta ggttagtgct atcgtgagcc accaagcaag
     3061 cgcatgagtt tcacctcgcc cttcacgctg gtgttcagcg gcggcggcct caaggggctg
     3121 gcccatatcg gggtgctccg cgctctggaa gagcggggcc tcattccgag tgcggtcatc
     3181 ggcagcagca tgggttcgct ggtggcggcc gcctgggcca cggggatgtc gctcaaggag
     3241 atgaccgacc gggcgctggc ggtgcgtcgg cgcgacatct tccaggtggc gcacaccgac
     3301 atggccttca agcggatgcg cgcccccgcg gtctaccgca aggaaccgct ggatcacctg
     3361 atccacagcc tggtcggcga cgtcaccttc catgacctgc cccgccgcct gctcatcaac
     3421 acggtcgagc tcaactccgg catgcagatt ttctggggcc tgccgggcct gcgcaacgcc
     3481 cgggtggcgg acgcggtgtt cgcctcctgc gcccttcccg ggatcttccc gccccgcgag
     3541 atccagggcc ggtggttcgt ggacggcgcc gtgaccgaga acctcccggt gcacgtggcc
     3601 gcgagtcacg gcgagggacc agtcatggcg gtagacgtgg gctccaccag cgcggtccgg
     3661 agcgacgtgc aggatgaggg cttcgcagcg acctacatcc gcggcctcga gatcgtgatg
     3721 cagacgatca tggagagcaa gctccgccgc tggacctcgc cgccgctggt actggtgcag
     3781 ccgcgggtgg agcatgtctc gatgttcggc ttcgggcaca accgcgagct gatcgaggag
     3841 ggataccgcg cgaccctcga cctgctcgat gcgctcaagg atttcgatcc ccaggggagc
     3901 gggatctacc cccagcggcg agtgcagatc cgggtggact cggagcggtg catcggctgc
     3961 ggctcctgcg tcatgcatgc cccgtgggtg ttcgagctgg atcaggccgg caaggcacat
     4021 gtcattcagg cggtgcaggc ctggtcgccg atcgacgggg cctatgtgcg gaattgcccg
     4081 acctacgcca tcagcgcccg cctggcccca ccgtcgcggc acgacgggac cggaactcct
     4141 ccgacgcctg cctgagctcg gccaccaccc tctcccaatt gagccgctcc tccacccgac
     4201 gccgtccggc agcgccgagc gcggctctgc gcccatcgtc ctcgagtaac gccgcgatgg
     4261 ccctggcggc cgccgcggca tcggacgggg gaaccagtat ccccgattca ccatcggcaa
     4321 ccgcatcggg gactccaccg ctcttcaccg cgatcacggg acaccccgag gcctgggctt
     4381 ccaccagcga gagcccgaag ccctcgacct cgttccccga ctcgcgcgag agtcccaggt
     4441 agaccgtcgc gctccggtag agcgacggaa ggtcctcatc cgggacgggg ccaagaaaga
     4501 caagccggtc ggaaacgccc aggtccgtgg ccagcgcggc gagccgctca cgatcaggtc
     4561 cggtgccggc gaccgcatac tggaggtcgg ggaatcgctc gtgcagcgag gcaagcgccc
     4621 tgatgccggt atcgacgccc ttgtggggca ccagccgcgc aacggtcagg agccatcgcc
     4681 cctgaggcag cgggtaccgc cggccgtcgg gagagaagcg ccgcgggtcg gcgccaaggg
     4741 gaatcacccg gatgaggccg gcgacgccgc ccagtccgag ctggtcgagc agtgcccggc
     4801 agcggcccgc ggtccactcg ctgcacgcca caatgcccgc cgcatctcga aagagcatcc
     4861 gaacccggcg ccgcttgcgg gccgagcggc gggcctgctc gctcacgatg gcgagatcga
     4921 gcccatagac gatgagaccg tagggaatgc ggcgggtggc gccgagccac cgggcgacgt
     4981 ggcccgcagg cttgaggttc cccgcccaga tgaacgctgg acggcgggcc cgaatcacgc
     5041 gatcagccgc gcgaccccac tgaatcagcc cccccagcgt acgaagccgc tcggcgctca
     5101 cgggcgcacg ggtgatgggc agcccactgg ccccgtccca ctcctcgtcg ccacttatcc
     5161 gtccggtgca gacttcgagc tcagcgtgac tgtggcgaac gatctcgccg agggcccgcg
     5221 cgataccgcc gccgcgagga gggaaatcgt aggccagcag taactgggaa ctcgcggtca
     5281 tcccgagcgg ggcgacggag cctctcacca gcgagcgata cactgccagc gtccggtcga
     5341 acatctcctc cagtgaaaaa tcttcccggg ctcggcggca agcagcagcg ccgaggcggg
     5401 cggcgagctg agggtcggcg agcaggctct cgagctggcg agcccagtcg gagggatcgt
     5461 ccggcgccgc caggaggcca tcgagtccat gacggatgat gacttcgttg ccggtggcgc
     5521 gggatgcgat caccggcttc ccgagcgcca tggcctcgag cacggcctgc ggcagcgcat
     5581 cccagcggct gggatgcagg gccacttcga gcaggtcgta gagcggccgc acctcgggat
     5641 cgaacggcag ccgcactacc gcgtgccgct cgggaattgc gggcagcggc aacgcgagcg
     5701 cttcgggtga caacccgctc agcaccaggc ggaccggcgt ctcgacccgg gccagcgcgg
     5761 cgagcaccac ctgctggtcc ttgtggcgcg cgacgatgcc gaccgtccgg cgacccggtt
     5821 cccagccgat ccgccggcgc catgcgtcga cctcctcctc gttcaccggg cgatcgattc
     5881 ggtccgtcaa caccccgttg tgcaccacca ccagcttctc cgccccgaag ccctgccgct
     5941 cgagttcggc ccgcaccggt tcgctcaacg caatcacccg gtcggcggcg cgattggcga
     6001 gccaggtctc gagccgggtg gtgcggggcc aggagcggcg ggtaaagacg agcggaacgg
     6061 agagccggcc catcagcgcg aggaatgtca gcgcttcacg gtcgcgcgaa ctctgagcat
     6121 tgatcaggtc gaccggatgg cggtggatca cctcgagcag cttccgggca ttgggccagc
     6181 gccggcgcga taccagctcg accggatgga cctcgaggcc gccccgcttt gcctcccctt
     6241 ccacccatga gccgggcgga cagaccaggc gcacgtgcac cccgcgggcc acgagtccca
     6301 gagccaggtg cagggtggaa ttcaccgcgc cggcgccccc accctgatgc agggtgatca
     6361 ggacccgcat aggttccggc ttatccatgc ggattctcat cgtcggcgcc ggcggcgcct
     6421 accggaccga gatttcgatc gcgcgcgcgg ccgagtcgct cgggcaccag gccaccgtgc
     6481 tggacgcgct ggggtggcgg cggcgccttg gtcccctcgc cggaccctgg cttcggtccc
     6541 gcgccgacgc gttccggcct gactacatcc tctgcacccg gcatgcgatc gccgccgggg
     6601 cccggacgat cgggcgaatg gtcaaaggcc gtgaatccgc tttctggtat ttcgacggga
     6661 tctcgcctct gccgcccagg gccacggagc tcgcgcgcct cgtctcccgc acctttgcga
     6721 ccaccggatt cgagaccgat gccttcgccg cgctgggact cgaatcgcac ttcctgccgc
     6781 agggaatgga tcccgggatc gaccagccgg ccgccacggc gcccgccgcg ttccagtgtg
     6841 aggtctcgtt cgtgggatcg gggcagtatc ggaggcgatt ggcgttgctg gagcagatgg
     6901 cccgacgctt ccggctccag atccggggtc cgggttggga gaatgtcccg gcttcgctgc
     6961 cgttccacgg gggacgggtc gacggaatcg cctttgcgca ggtcgtgagg ggtgcggcga
     7021 tctcgcttgg catcgacgcg ctggaggagc aacgtcagga gcggcgcggc ggcacctcca
     7081 atcgtctctg gaaggtgctt ggtgcgggcg ggctctacct gggtgaacac gtcccgggaa
     7141 tcgaggagtt cgcgcggaat ggagagcacg cggtctggta tcgatcgaac gaggaggcgc
     7201 tggcccaggc cggggagttg ctccgcgacc cggagcggcg ggcgcggatt gcggcggcgg
     7261 gacgggcgca tgtgctcgcc cgtcatacct accgtcaccg gctcgagctg ctcctcaggg
     7321 gacagggcta cacctcgacg tagttccggt attcgaacgg acgccagccg gtcagtcgtt
     7381 cgaccgcgag ggtggcgaga agcgagagcc ggcgcgcgtc ccaggaccga ggggtgaatc
     7441 cgggtgtcat gcggggacga tgttccgcga tccagcggtc catgatcgcg gggtgggttc
     7501 cccggaaggg ccgcagccct acatcggccg ggagctgctc ccggatcggt gcgcggcgcc
     7561 cggcgccggc gtgatagagc tgatcgtcga ccacctgctt ccggcgcagt gcctcgaggg
     7621 ggcgggccca gccgtagtgg aagtacctgg caccactggc gcgggcacgg acccggcgtc
     7681 cgtcagccgc ccggaatccc tgggcatcgc ctcggctttt gagcccggcg gccactcgta
     7741 cggcccgcac ttcgcgccgg taccagcggc ggctggttcc aacccagtcg gtggtcccgt
     7801 agaaatggac gaagtcgacc agcagtccct cgatccgcgg atcggcgtcg gcccgttcga
     7861 gcgcgtcacg gaacgggacg agtccatcct catgcaggat ctcgtcggcc tggatgtaga
     7921 ttgcccagtc gccccgagcc agatccagcg cgcgctgggt ctcgaccgcc agcatcgcgc
     7981 tgccgaggcc ccggttccac tcgccctgga tgatgcggat ccgcgggtcg gacagctgct
     8041 gaatccggtc gagcgtgccg tcgctcgagg gcccgacatt gacgatcagc tggtcgcaga
     8101 gcggcagcac cgagccgatg gcctcgagaa cgggaaattc gagggtgagc gcatcggcca
     8161 cgagggtgca accgacgatt cgcataggcc tcacgggaag gacgcgcgaa agatatgcgg
     8221 gtggcggtag tgcatcacac gcggctgccg gtgaagggct acggcggcac cgagcgtgtg
     8281 gtcgtggcgc tggtccgggg actcgcggcc ctgggccatg aggtgtccct ggtcgcgccg
     8341 gtgggcacga aagtacccga ggcccagctg gccccggttc cggcggaccg cttcaaggac
     8401 gtcaccttcg atgtcagctc cttcgtgccc gccggcaccg agctggtgca tttcttctat
     8461 ccgccaaggg tgtcgccctc gttcccatgg ctctggacgc tggaaggcac gaccccggcc
     8521 ggcgttaccc gccctcccaa taccatcttc gtcagccaga gccacgccgg ccatcaccag
     8581 agccggagtt tcgtctacaa cgggctcgac cccgccgatt acatctttca cgccaagaag
     8641 gattcgttcg acctctttct gggccggctg cattcgagca aggggtggca gctcgcggtg
     8701 gaaggggcca aggcgtcgca gcggcggttg gtggtggccg gcggctggcg gcccagcctc
     8761 tcgcgcttca tccgctttgc gggtgaggtg gacgggaagg aaaaggccga gctcctcgcc
     8821 ggggcgcggc tgctctggat gccggcccag tgggaggagc cgttcgggct gacgctgatc
     8881 gaggcgctct tcagcggcac gccggtgctg gggacccgcc gcggcgcgct gccggaggtg
     8941 ctgagtccgg cggtggcgga gttcggggag acggtcgagg agctggtgtc gcggttgccg
     9001 gagatggcga agaaggaccc cgaggcgtgc cgctcccggg cgacccgcta cttcagccac
     9061 acggcgatgg cggaggaata tgtgcggttc tatcggcact acctggcgac gggggtgctg
     9121 ccggaggggg tgcgatcggt ggattgatgg cctgggttcg gagtgaggga cagttgggca
     9181 gttcaccgca gaggcgcaga ggcgcggagg gccgcagagg ggtccgattg atcttctagt
     9241 ctctctgaca gctccaccgt tgatgttgtt gtttcttctt gttgttggtt cttcttgttg
     9301 ttggttcttc ttgttgttgt ttcctcttgt ggttgtttct tcctagttaa ctggattcga
     9361 ctcggaactc tctgcggccc tctgcgtctc agcgcctctg cggtgaggca gttcaagccg
     9421 agccagtcac cacgccgagc agctccgcca ttcgatgcat ataggtatgg tgccggatgg
     9481 cccgctgccg tgcgttcccc gccagccgct cgcggtactt gtcatcctgc accgcccgct
     9541 tcacctggcc cttgagctcc tcgggggtgt tgtacagcag cacctcgctt ccatcctcga
     9601 aatgctgcgg caggtccgcc cgggcatcca ccacctgcgc caccccgatc gcggcgagtt
     9661 cgaacgtccg ccgattcacc ccggtgggat cgccgttgcg atcgtcgggc ccggtccggt
     9721 gcacattcac cgccacggtc gccccggcgt aggcccggac aaaatcctcg tgactcggca
     9781 gctcgccccg gcagtagtcc ttgagcccgg tgcggcgcca ccccggcccc cagagggcga
     9841 ggccgaactc caccagctcg gtcagcagcc gttcccgccg gctcgacgcc gcccccgcga
     9901 acaccacgtt ggcccggaac accccacggg cccggagcgg cttgtgcacc gagggatcgc
     9961 agccgagcgc gaggtagtgg ccgtgcagga tgccgtaccg ctggagccgg gtgagcccgc
    10021 cgctcgagcc gatgaagatg tggtcgtacg ccatcgcctc gcggctcgcc tcatccggct
    10081 tgccgatgtc ctcgtcgagg agctggaccc acttggcggg gtggccccgg cgcagctcgg
    10141 tggcagcatc cggggggagc aggccattgc ccgcgaccag gaccaggtcg gtcggctgct
    10201 ggtccagcgc ggccctcacc cgctgatcga tgtcgcggcg caccagccgt tcgatccagc
    10261 cggccttctc ggggtcgagc gcgttgacgc tgcagcccag ccgctcgagc gcccgctggc
    10321 ggagcgcatt gtgagcgaac tcgccctcgt cgaaatgggc aaccagcagg acgcggaggc
    10381 cggtgtacgg agcagtcata ggcggctgag cggcaatcta taccggagcg ttccgacttc
    10441 cgagttccgg cgcggccagt gcgtcaggcg gaccggcctc cgagcgccgg aactcgctgc
    10501 cccgcaccag ccgggcgtac gtcccccctt cggccagcag cccctcgtgg gttccccgct
    10561 ccacgatctc cccgtccgcg agcaccagga tctcatcggc gtggcgcacc gtcgcaagcc
    10621 ggtgggcgat gaccagcacg gtccggtcct gcatcagccg ggtgagcgca tcctgcacca
    10681 gccgctccga ctcgctgtcg agcgcactgg tcgcctcgtc gaggatcagg atcggcggat
    10741 cacggagcac cgcccgggcg atggcaaccc gctgccgctg cccaccggag aggcgggtgc
    10801 cgcgctcacc cagcagggtg tcgtaaccct gcggcagctc ggcaatgaac ccgtgggcat
    10861 tcgcggcccg ggccgccgct tcgatgtcgg cgtcactcgc cccgggccgg ccataggcga
    10921 tattggcccg caccgtggcg ttgaagagca ccgtctcctg ccccacgaag cccagcagtg
    10981 agcggagcga ggcgcgcgag acctcggtga tcggcacccc gtcgatcagg atcctgcccc
    11041 ggctcggttc gcgcagccgg ggcagcagtt cggccagcgt ggtcttgccg gcgcccgacg
    11101 gcccgaccag cgccaccgtc ctgccccgct ccagggtgaa gccgatatcg cgcagcacga
    11161 aatcctccga cccctcgagg tacgagaacc acacgccctc gtagcggacc tcgcgcccga
    11221 accgcgccgc cggaagcccg gcggcctcct gctccgccga cggcagatcc aggatctcga
    11281 acacccggtc cgcccccgcg agcgcgagcg acatctggct cgggaactgg gtgatcgcct
    11341 tgagcggcgc catcacccgg agcgccgcca cgatgaacac cagcaacgcc tccggcgaga
    11401 gcgcgcccga cccgagcacg tcgggcgatg cccccaccgc gatcagcgcc accagcagca
    11461 ttccgccgaa gatctcgctc accgggctcg aaagcgtcgc cagccgctga gtccgcgcca
    11521 cccgtgcccg atagcgctcg gcctggtcgt gaaagcgcgc gacctcctcc cgctcaccgc
    11581 cgtacgcccg gatcagcttc gtcgcgccga gtcgctcggc caccgtggcc gtcatctccc
    11641 ctgcttcctc ggcccgggcc cgggcgtgct ggcggaggcg gcgcaggaga taccgaatgc
    11701 cgatgaggag cagcggcgcg gccgagaggg tgagcagggt gagctgccag gagagctggg
    11761 ccaggaccac cagcgtggtg aggatcagga cgagattctg gaagaacgat gcgagccccg
    11821 cgctgatggc caccttggtc tggtcggcgt cctgcatcac ccgcgcgatc acctgaccac
    11881 cccgggtccg ctccagccat ccgaggtcga ggcggaggag atgctcgaac agggccgagc
    11941 ggaggtcgcg caccaggccc tcctgggaga gcacgctcag ctggctcgcg atccaggcga
    12001 ggagattctt gagcagcagc gtcacccaga gaagcagcac cagtcgcacc gtgatgccgg
    12061 cggggtcggt acccaggaag gggcgaagga cctggtcgac cgcatgctcg agacgggtat
    12121 cgccggccgc gagccctccg gcgctgccga agagatggcg gaggagcggg atcaggaaga
    12181 ggagggtgac accgtcgagc accgaggcga ccgaggtcgc gacgatcccg ccggccaggg
    12241 tccagcgata cggcgcgagc cagtccagca gccggcgccc ggtgcgccgg aaggacagct
    12301 cagccaccgc gccgggcggt caggagggcg atgggcagca ccatctcctc cggggtcacg
    12361 ccgccgtgga ggaaggcgcc gcgatagcga gcctggtact cccggagctt ggtgggatag
    12421 acgaagaacc ggtccccggt ggcaagcaga agccgcacgc cgggtggccg cggcggcagg
    12481 ccgaaagagc cgagatcttc caccaccagc gccgcgtccc gttcctgggc cctcaggtcc
    12541 tcaccgaact tgtagcgcag gttcgaggtc gcatcccggc gggcatagac cgtggccggg
    12601 gtgtggcagt gaatcgagcc gtgatcggtg gtgaggagca ccggcacatt ccggcgttcg
    12661 gcttcgcgca gcgcggccca gagcgccgag cgctcgaacc aggtgcgggt gagactccgc
    12721 agcgccgggg tgtcccgcgc cacttcgtag agcgtggaat tctcggtccg tccgtgggtc
    12781 agctggtcga tgaagttgaa gaccagcgct gtaacgcctt cggcggcgag atgggccggg
    12841 agccggttga gcagcgcctc gccatcggtg gcggtgaaca ccttctcgta gcggaccggc
    12901 accggcgagc cgttgcgctc ctccagctgg cgcgcgagca gctcgtgctc gtgcatgttg
    12961 aggctggtct cgtcctggtc ccgccaccag ttgggatagc ggctggccag gacccgcggc
    13021 aggagcccgc tgaagatggc attccgggcg aacggcgtgg cggtcggcag gatcgagtag
    13081 taataggaag tctcgacctc gaaccgggtg ctgatcaggg gccggatcgc ctcccattga
    13141 tcgaggcgga gacagtcgac cacgatcagg agcgccctgc cgtgctgccg cagcgccggc
    13201 tccacgaact cgggcacgat gtcgacgctg aggggcggcc ggtcggcccg cgctcccgcc
    13261 agccagccgg catagcgctg ctcgatgaac cgcgcgaaat cctggcggag actgatctgg
    13321 agcgagcgca gcgcctcctg cagccccggc tcctccgcgt gacccagccg cacctcccac
    13381 tcggccagct ccaccaccag ctcggtccag tcgcgccagt tgagggccgc gctccgccgg
    13441 gcttcgagtt cccggaatcg ggtggcgaaa tcgcgcgaga gccgctgctg ccggatccgg
    13501 tcaccctcga ggagccgggt caccaccgag aagacctggc gcggattgac cggcttcacc
    13561 aggtagtccg agatctcggc cccgattgcg tccttgagcg tggtcggttc ctcgctcttg
    13621 gtcaccatca ccaccggcat cgtggcgtcg atcgtacgaa tggcgcggaa caggtcgagc
    13681 ccccggcgcc ccggcatctg ctcgtcgagc agcaccacgc catacggctg gcgctggagc
    13741 aggaccagcg catcgtcgcc gtgcgcggcc ttctcgacgc tgaacccctg ttcctcgagg
    13801 aacaggatgt gggatgagag gctctccacc tcatcatcga cccagagaat gctgcgggga
    13861 cgaggcatgg gcctataata agccgctatc gccttatttt ccggtcgtgt cccctccgcg
    13921 catcctgctg gtccgttttt cctcgctggg cgacgtgctg ctcaccacgc cgctgatccg
    13981 ggccctcagg gcgcggcacc cggccgcgac catcaccgtc ctcaccaagc aggtgtgggc
    14041 tccgctcctc tcggccaaca cccatctcga ccaggtggtc accctggccc cgggccaatc
    14101 actggtgccg ctcgcccggg cgctccggcg ggccaacttc accgaccgac tcgatcttca
    14161 cgccagcgtc cggacccggg tcctccggct gctggtcccc ggggcctggc acggttacaa
    14221 cacccggcgc cgggagcggc gcgcgctcat caccctgaag caggatcact accgcgacca
    14281 tttaccggtg ccggagcggt atttcgaggc ggcgagg
//
LOCUS       DATIFF010000502         1534 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_526129, whole genome shotgun sequence.
ACCESSION   DATIFF010000502 DATIFF010000000
VERSION     DATIFF010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1534
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_526129"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..951)
                     /locus_tag="VLD58_07500"
     CDS             complement(<1..951)
                     /locus_tag="VLD58_07500"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB54185.1"
                     /translation="MFCTRCGSEISGTSKFCPSCGLDLTATTPVRAMATGAVAELDLV
                     REALATEYEIFEELGRGGMALVFRAKDRHLEREVAVKVLPFTLAFDAEFVERFQREAR
                     TAAQLEHPNIIPIYRVGRSGRVIYFIMKYLRGGSLATLVGERKTLTPPEIRRVLVEAG
                     SALGYAAQRGIVHRDIKPDNIMFDEFGQCVLTDFGIAKAASGGRLTGTGMSIGTPHYM
                     SPEQARAQPIDGRSDIYSLGVVAYQCLAGVVPYDGEDSFSIGYKHITEPIPTPQLINA
                     DERRLFEVIKRMLMKDPADRFQTCEELIASLQGQPIATSGF"
     gene            1053..1499
                     /locus_tag="VLD58_07505"
     CDS             1053..1499
                     /locus_tag="VLD58_07505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54186.1"
                     /translation="MVPYHTIAFSQQKLRAALRRSGGQDPALAYGFVVHSRRQHERPT
                     LGVITLNGESLPLNRRLLAGLDGLTLWLFGHARVTLDSGTPVEGVPEDKLEDAPLATL
                     LMHIATFDLAAGAAQNLVQVEASIRADTLVQPLIVLTPTRPEQWPG"
BASE COUNT          241 a          537 c          520 g          236 t
ORIGIN      
        1 gaaccccgag gtggcgatgg gctggccctg gagcgaagcg atcagctcct cgcaggtctg
       61 gaaccggtcg gccgggtcct tcatcagcat ccgcttgatc acctcgaaca gacggcgctc
      121 gtcggcgttg atgagctgcg gcgtcgggat cggctcggtg atgtgcttat agccgatgga
      181 gaagctgtcc tccccgtcgt acggaacgac gccggccagg cactgatacg ccaccacgcc
      241 caggctgtag atgtcgctgc gcccgtcgat gggctgcgcc cgcgcttgct ccgggctcat
      301 gtagtgcggc gtgccgatgg acatgcccgt gccggtcagg cggccgcccg acgcagcctt
      361 ggcgatgccg aagtcggtga gcacgcactg cccgaactcg tcgaacatga tgttgtcggg
      421 cttgatgtcg cggtgcacga tgccgcgctg cgccgcgtag cccagcgcgc tgcccgcctc
      481 gaccaggacc cggcggatct ccggcggcgt gagggtcttc cgctcgccca cgagcgtcgc
      541 gagggagccc ccccgcaggt acttcatgat gaagtagatg acccgcccgg accggccgac
      601 ccggtagatc gggatgatat tcggatgctc gagctgggcg gcggtccgcg cctcccgctg
      661 gaaccgctcc acgaactcgg cgtcgaaggc gagggtgaag ggcagcacct tcaccgcgac
      721 ctcgcgctcg agatggcggt ccttggcccg gaagaccagc gccatcccgc cccgccccag
      781 ctcctcgaag atctcgtact ccgtggcgag cgcttcgcgc acgaggtcga gctccgccac
      841 ggccccggtg gccatcgccc ggacgggcgt ggtcgccgtg agatcgaggc cgcaggaggg
      901 acagaatttg gaggtgccgc tgatttcgct gccgcagcgg gtgcagaaca tgggcccaag
      961 ctacctaggg agtaggggga gtcaatggct ggcacaaacc atgctcagcc gggctgtgcg
     1021 cgttccccca acgcacgcac ccgggagatc ccgtggtccc gtaccacacg atcgcgttca
     1081 gccagcagaa gcttcgggcg gcgctccggc ggtccggcgg ccaggacccc gcgctggcct
     1141 acggcttcgt ggtgcactcg cggcggcagc acgagcgccc cacgctcggc gtcatcaccc
     1201 tgaacggcga aagcctgccg ctaaaccgcc gcctgctcgc cgggctggac gggctcaccc
     1261 tctggctgtt cgggcatgcc cgggtgacgc tggacagcgg gacgccggtc gagggggtcc
     1321 cggaggacaa gctggaggat gcgcccctcg ccacgctcct catgcatatt gccacgttcg
     1381 acctggccgc cggagcagcc cagaacctgg tgcaggtcga ggcctcgatc cgggccgata
     1441 ccctggttca gcccctcatc gtcctgacgc cgacccggcc ggagcagtgg cccggatgac
     1501 gctcctcaag taagccacga tcccctcgaa gact
//
LOCUS       DATIFF010000503         1181 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_833688, whole genome shotgun sequence.
ACCESSION   DATIFF010000503 DATIFF010000000
VERSION     DATIFF010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1181
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_833688"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..847
                     /locus_tag="VLD58_07510"
     CDS             <1..847
                     /locus_tag="VLD58_07510"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSB54187.1"
                     /translation="TASGREREYAIRPASRAGRIVIVGAGPAGLEAARVLALRGHGVT
                     VFERAAEPGGQLLLSRIVPGRQEMAGHITWLVGAARRAGVRLVLGVEATAETVLGEGP
                     DVVVMATGARPGLPEIPGLSDSPAVDAFEVLRRPLDGIGRVLVIGGGILGVGVAHVLA
                     EHGAEVVVAEAGKELAAEIGVRPRWLYVEGLLARPNVAVHLGTTVEGLGERHAVLWNG
                     WEQWELKDIDLVVPTRPMLPVGDLAEALWAEPDGPPVFLVGDCLQPRTALEAMHEAAA
                     LGHRL"
     gene            964..>1181
                     /locus_tag="VLD58_07515"
     CDS             964..>1181
                     /locus_tag="VLD58_07515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54188.1"
                     /translation="MARAITEEEKQSALELLGRARAAMKAIERYDQAAVDRLSRAIGW
                     ATANEPTFVALTRMGVEESGMGSMDGGPA"
BASE COUNT          171 a          348 c          469 g          193 t
ORIGIN      
        1 caccgcgagc ggccgggagc gggagtatgc gatccggccg gcgtcgcggg caggacgcat
       61 cgtcatcgtg ggtgcgggac cggccggcct cgaagcggcg cgcgtcctcg ccctgcgggg
      121 ccatggcgtg acggtcttcg agcgggcggc agagccgggc gggcagctcc ttctcagccg
      181 gattgtgccg ggccggcaag agatggcggg acacatcacg tggctggtgg gcgcggcccg
      241 gcgtgccggt gtccgtcttg tcctcggggt cgaggcgacg gctgagaccg tcctgggtga
      301 ggggccggac gtcgtggtca tggcaaccgg tgcccgtccg ggtctgccgg aaatcccggg
      361 cctttccgac agtcccgccg tggatgcctt cgaggtgctc cgtcgtccgc tggatgggat
      421 cggtcgggtg ctggtgatcg gtggcggcat cctcggggtc ggtgtggccc atgtgcttgc
      481 cgagcacggg gcggaagtcg tggtggcgga agctggcaaa gagcttgccg cagagatcgg
      541 ggtccggcca cgctggctct acgtcgaggg tctgctcgcc cgacccaacg tggcggtgca
      601 cctcgggacc acggtcgagg gcctcggcga gcggcatgcc gtgttgtgga acggatggga
      661 gcaatgggag ctcaaggata ttgatctcgt ggtgcccacg cgcccgatgc tgcccgtcgg
      721 cgacctggct gaagccttgt gggcggaacc ggacggcccg ccggttttcc tcgtcggcga
      781 ctgcctccag ccgcgcaccg cgctggaggc catgcacgag gcggcggccc tgggtcaccg
      841 gttgtaggcg caagagcacg gagggcggcg cggtcgctcg agtgtgtggg ttcgtgagtt
      901 tcgtgaacag ggccgctgct gaggcttaac tcaacgagga cgtggcgtct tctggaggga
      961 acaatggcca gagcgattac cgaggaagaa aagcagagtg ctctcgagct gctcgggcgg
     1021 gcgcgtgcgg cgatgaaagc cattgagcgc tacgatcagg cggcagttga tcgactgagc
     1081 cgggccatcg gatgggccac ggcaaacgag cccaccttcg tcgccctcac ccgcatgggt
     1141 gttgaggaaa gcggcatggg cagcatggac ggtgggccgg c
//
LOCUS       DATIFF010000504         6289 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1757016, whole genome shotgun sequence.
ACCESSION   DATIFF010000504 DATIFF010000000
VERSION     DATIFF010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6289
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1757016"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(196..3195)
                     /locus_tag="VLD58_07520"
     CDS             complement(196..3195)
                     /locus_tag="VLD58_07520"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HSB54189.1"
                     /translation="MVPVSMLALAWVASGLPGAPASDPVAPRPIHQLVHTTWTPKVGG
                     GPIGVRDLAQTADGYIWVGSYFGLWRFDGVRFVRYVPLGGDTIPSDPINGLLASRDGS
                     LWMIGGRGGVAIRLRAGRITLFHDAEGLPGARDLAESSKGTLVAGSVNGLFRFSNEKW
                     ESVAAAWGFPGKQARQVWFDRDDALWVVTEDRVVYLPAGATRFQDPGIPMKPTEYCRF
                     AQEADGTVWLAAVGKSAFTLRKVGDKAAGFTEVKIDPLAMLIDRRGSLWIASSVDGLR
                     RVPEVARIRGKRIAQSGPEAERFTMKDGLLADIPTALLEDHEGNIWVGSSNGLERFRE
                     GAFTPILAQGPARPRFVIAGRDSSVWSGPYNLGALQRFGPRGQETLHPGFGNMTIAQD
                     SAGTTWIVDGDKRLLRLQGKRFVPIPLRPGTARGLYSLTSDPGGTVWVYSTELGLLRL
                     AGDSLVHVADMEEASLHTGQPFSDSKGRIWVGQANQIFLYDRGQVTRYAAKQGIGGFV
                     YGFFEDRGGTIWASIGDGLSRFEGDSFRTLKRKDAIPGYTVYGAVQDDGGAWWLATLP
                     GILRYPPGEIERALADSTYLPRFRSFDESDGMIGALVKGYWGPVLARSGDGTIWVTTD
                     SGLARIDPRVLPLDRPPPVSLEVVRIQGREAGLSDAGEIPAGATDLEIDYTSLTFGTP
                     ERIQFRYRLEGADPEWREVGTRRRAYYTALAPGSYRFRVTASYGDGTWNEAGAAWSFR
                     VLPAWYQTLWSKALLVLLIGGLGGTAVALLQRRRHRHAQKTLKDRYEATLAERARIAQ
                     DLHDTLLQGFAGVSMQLKAAERALPDEPDVAAETLIRVQQLTRETLREARERVLDLHE
                     PDLGHEDVAGALETSGRAMIAGTGIGLSVTTRGNRRRLPRVVEIAAIRIGREAIANAV
                     KHAEARHIEVHVGFEAAVLGLEVRDDGRGFTPEQGERARAQGHLGLSGMRSRAERAGG
                     TCVVGPGPAGGTVVAVELPLDQRQGAG"
     gene            3437..4762
                     /gene="hemA"
                     /locus_tag="VLD58_07525"
     CDS             3437..4762
                     /gene="hemA"
                     /locus_tag="VLD58_07525"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: protein motif:HMM:TIGR01035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HSB54190.1"
                     /translation="MPIACVGLSHHTASLAVRERLAFSRESVSSALARVREPGLRAIG
                     IAELSLVSTCNRTELYAAAADPSFRFSRAPELLSHLLLSAGGPGLEEVRPCLYQHAST
                     EAVRHLCRVASGLDSMILGEAEVLGQVAAAHQTAVQAGTAGPILEAAFLAAVRAGRRA
                     RSETGICRNPVSIASEGVRLASEVAPPGARILILGTGEMGRILGRVVGSRGFTRVEVI
                     GRTAESVAAVAAGIAATARPWHELHDAVRDADLVLTCTAAPHPVITRELVQSAVAGRQ
                     TDRTLTLIDLAVPRDVEPEVASFPGVRVYNIDALQPRLNGNLAGRRQEVPQVEAIVEE
                     EVTLFQAWRHGAGLRPVLAAMHLRGEEIRRKETDRALRRMGCADPQVQRQVEALSRAI
                     VAKLLHHPSARLRMETDPMRSRLYVGAVRDLFGLDPTPPGSAATPDDSA"
     gene            4759..5679
                     /gene="hemC"
                     /locus_tag="VLD58_07530"
     CDS             4759..5679
                     /gene="hemC"
                     /locus_tag="VLD58_07530"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: protein motif:HMM:TIGR00212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HSB54191.1"
                     /translation="MITATGVIRLGTRASRLARFQTDLVRQRLAALHPAIDFRTAVIT
                     THGDRDVRTPLPAIGGKGVFTEELETALREGAIDLAVHSLKDVPVEPAAGLTLIVLGP
                     REDPRDVLISREGWTLERLPPRAAVGTCSTRRSAQLLAVRPDLRLLPLRGNVDTRVRD
                     ALAGDFDAIVIAAAGVHRLGLGGAVTQYLPLEVMLPAPGQGALAVQCRSDDAVLLRQL
                     GGLGNDAVQAATDAERGFLEGLGGGCAAPIAALGEVSGDRLELEGLVASLDGRERIYC
                     SAEGPMTQGRALGLALAARARTRGAEALLE"
     gene            5676..>6289
                     /locus_tag="VLD58_07535"
     CDS             5676..>6289
                     /locus_tag="VLD58_07535"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006780 - uroporphyrinogen III biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006782 - protoporphyrinogen IX
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HSB54192.1"
                     /translation="MSGLRGRAVVITRSRSQAGPLAEALLERGGIPVFFPTIDIRPLD
                     DCSALDRALHGADRYDWIVFTSVNTVNAVWGRLARLGRVELTGSSRIAAVGPATVTAL
                     AERGISTTTMPAEFRGSAIAATMGQVAGRRVLLPHAALAREETAASLRAAGAIVDEVV
                     AYQTLPPAPDGASLAALEGEIDAVTFTSPSTVRNFVTLAGPGALA"
BASE COUNT          951 a         2250 c         2106 g          982 t
ORIGIN      
        1 tgagcgacga gttgaagatc gggataggtg ccgatcaggg tggcgagacc gccgcggaag
       61 atggggtgat catccacagc catgatgcgg ataaccgacg ccgtccctgg attgggggag
      121 ccgcgaggca tggaggtcat gccgaagagt ggaacgtcgg gaagccgggg acaatacgcc
      181 gttcggcgta tgggctcatc cggcgccctg gcgctgatcc aggggcagct cgaccgcgac
      241 caccgtcccc cctgccggcc ccgggcccac cacgcaggtg cccccggcac gttccgcccg
      301 gctccgcatt ccgctcagac ccaggtggcc ctgggcccgg gcccgctcgc cctgctccgg
      361 ggtgaaacct cgcccatcgt cgcggacttc gaggccgagc accgccgcct cgaagccgac
      421 atgaacctcg atgtggcgcg cctcggcgtg cttcaccgca ttggcgatcg cttcccggcc
      481 gatccggatc gcggcgatct ccacgaccct gggcagccgg cgccgattgc cccgggtggt
      541 gaccgacagg ccgatgccag tcccggcgat cattgcccga ccgctggtct cgagggcgcc
      601 ggccacgtcc tcatggccga ggtccggctc atgcaggtcg aggacccgct cccgcgcctc
      661 gcgcagcgtc tcccgggtca gctgctgcac ccggatgagg gtctccgcgg ccacgtccgg
      721 ctcatccggc agggcccgct cggcagcctt tagttgcatg ctcactccgg cgaagccctg
      781 cagcagtgtg tcgtgcaggt cctgcgcgat gcgggcccgc tcggccaggg tagcctcata
      841 cctgtccttg agcgtcttct gcgcatggcg atgacgacgg cgctggagca acgccaccgc
      901 cgtgccgccg agcccaccga tcaggagaac gaggagcgcc ttggaccaga gggtctgata
      961 ccaggcgggc agcacccgga aactccaggc cgcgccagcc tcgttccagg tgccgtctcc
     1021 gtagctcgcc gtcacccgga agcgatacga gccgggtgca agagcggtgt aataggcccg
     1081 ccggcgggta cccacctcgc gccactccgg atcggcgccc tccaaccgat agcggaactg
     1141 aattcgctcc ggggtcccga acgtcagtga ggtgtaatcg atctcgaggt cggtggcgcc
     1201 ggctggaatc tccccagcgt cggagagccc tgcttcacgg ccctggatcc gtaccacctc
     1261 gaggctcacc ggcggggggc ggtcaagcgg aaggacccgc ggatcgatgc gagccaggcc
     1321 gctgtcggtc gtcacccaga tcgtcccatc gcccgacctg gcgagaacgg gaccccaata
     1381 gcccttcacc aatgccccga tcatcccgtc ggactcgtcg aagctccgaa accgtgggag
     1441 gtaggtcgag tcagccaggg cccgctcgat ttctcccggt ggataccgga ggatgcccgg
     1501 caaagttgcc agccaccagg cgccaccgtc atcctggacc gcgccgtaga ccgtgtatcc
     1561 ggggatcgcg tccttccgct tcaaggtccg gaagctgtcg ccttcgaacc ggctcaaccc
     1621 gtcgccaatc gaggcccaga ttgttccgcc ccgatcctcg aagaaaccat agacgaatcc
     1681 cccgattccc tgcttcgctg cataccgggt gacctgtccc ctgtcgtaca ggaatatctg
     1741 gttcgcctgg cccacccaga ttctcccctt gctgtcgctg aacggctggc cggtgtggag
     1801 ggacgcttct tccatatcgg ccacatgcac caggctgtcg ccggcaaggc gaagcaagcc
     1861 gagctccgtg ctgtagaccc agacggttcc gcccggatca cttgtcaggc tgtagagtcc
     1921 ccgcgccgtg cctggccgca gcgggatcgg gacgaagcgc ttcccctgga gacgcaggag
     1981 ccgcttgtcc ccgtcgacga tccaggtcgt ccctgccgaa tcctgtgcga tcgtcatgtt
     2041 gccgaaaccg ggatgcagcg tttcctggcc gcggggcccg aaccgctgca gcgcgccgag
     2101 gttgtacggt ccgctccaga ccgaggaatc ccggcccgcg atgacgaacc gcggccgcgc
     2161 cggtccctgg gccaggatcg gggtgaatgc gccttcccgg aaccgctcca ggccattgga
     2221 gcttccgacc cagatgtttc cttcgtgatc ctccagcagc gcggtgggga tatcggccag
     2281 caggccgtcc ttcatggtga accgctcggc ctcgggtccc gattgggcga tccgctttcc
     2341 gcggatgcgg gcaacctccg ggactcgccg aaggccgtcg acgctcgacg cgatccagag
     2401 actcccgcgt cggtcgatga gcatcgcgag ggggtcgatc ttcacctcgg tgaaccccgc
     2461 cgccttgtcg ccgactttcc ggagcgtgaa cgccgacttc cccaccgccg caagccagac
     2521 tgtgccgtcc gcctcctggg caaagcgaca gtattcggtg ggcttcatgg gaattccggg
     2581 gtcctgaaac ctcgtggcgc ccgccgggag atagaccacc cggtcttccg tcaccaccca
     2641 gagcgcgtcg tcccgatcga accagacctg tcgggcttgt ttacccggga agccccaggc
     2701 ggcggccacg gactcccact tctcgttgga gaaacggaag agtccgttga cgctgcctgc
     2761 gaccagcgtg cccttgctcg attccgccag gtccctggca ccgggcaggc cttccgcgtc
     2821 gtggaagagg gtgatccggc cggcccggag gcggatcgcc actcccccac gcccaccgat
     2881 catccagagg cttccatcgc ggctggccag gagtccattg atggggtcgc tgggaatggt
     2941 gtcaccaccc agcgggacat accgaacgaa ccgcacccca tcgaaccgcc agagcccgaa
     3001 ataggagcca acccagatgt agccgtcggc cgtctgtgcc aggtcgcgta caccgatcgg
     3061 gccaccaccc accttggggg tccaggtcgt gtgcaccagt tggtggatgg gcctgggggc
     3121 aaccgggtcg ctcgccgggg ctcccggcag accggacgcc acccaggcca gtgccagcat
     3181 cgaaacaggg accatgcgac ctctacgttg agctgccggg aaaggcagaa catgctggca
     3241 agcgaccccg ggatcaagcg aactcgaggg ctctcagcca aagtgtcacg attgctctat
     3301 cgaagcgtga caacggaacg tgacaggcgc atcggatggt tgcgggtccg taccttcgcg
     3361 gagtcgcgat gagtacttct ccgaatggca gagcgggggc cccaaaagtt aggttgggcg
     3421 ctcgagaaat ccgcgaatgc ccattgcctg cgtcggtctc agtcatcaca cggcttccct
     3481 ggcggtacgc gagcggctcg ccttcagtcg agaatccgtc tcatccgctc tcgcacgcgt
     3541 ccgcgagccg gggctccgcg ccatcggcat cgcggagctc agtctggtct caacctgcaa
     3601 tcgcaccgag ctgtacgccg ccgcggccga tccttccttc cgcttctccc gggcccccga
     3661 gctcctctcc caccttcttc tcagcgccgg tggtccaggt ctcgaggagg ttcgcccgtg
     3721 cctctatcag catgcgagca ccgaggcagt ccgccacctc tgccgggtgg cctccggtct
     3781 tgattcgatg atcctgggcg aggcggaggt gctgggccag gtggcggccg cgcaccaaac
     3841 ggcggtgcag gccgggaccg ccggcccgat cctcgaggcc gcgttcctgg ccgcggtccg
     3901 agccggtcgc cgggcgagga gcgagaccgg catctgccgc aaccccgtga gcatcgcatc
     3961 cgaaggtgtg cgcctcgcct ccgaggttgc tcctcccggc gcccggatcc tgatccttgg
     4021 cacgggtgag atgggccgga ttctgggccg ggtggtcggc tccagggggt tcacgcgcgt
     4081 cgaggtgata ggccggaccg cggagagtgt ggccgcagtc gcggcgggca tcgcagccac
     4141 cgcccgcccc tggcacgagc tgcatgacgc ggtgcgcgat gccgacctgg tcctgacctg
     4201 cacggcagca ccccacccgg tcatcactcg cgagctggtg caatcggccg tggcgggccg
     4261 ccagacggac aggacgctca cactgatcga cctggccgtg ccacgggacg tggaacccga
     4321 ggtggcgtcc ttccccggcg tgcgggtcta caacatcgac gcactccagc cgcggctgaa
     4381 tggcaatctg gccgggcgcc gccaggaggt gccccaggta gaggcgatcg tcgaggaaga
     4441 ggtgacgctg tttcaggcct ggcgtcacgg tgccggcctg cgaccggtac tcgcggcaat
     4501 gcatctccgg ggcgaggaga tccgccggaa ggagaccgac cgggccctcc gccggatggg
     4561 ctgtgccgac ccccaggtcc agcgccaggt cgaagcactc tcgcgcgcga tcgtcgccaa
     4621 gctgctgcac cacccctcgg cccggctccg gatggagacg gatccgatgc gctcgcggct
     4681 gtacgtcggc gcggtgcgtg atctgttcgg actggacccg accccgccgg ggtcggcggc
     4741 aacccccgac gactcggcat gatcaccgcc accggcgtca tccgccttgg cacccgcgcc
     4801 tcgcgcctcg cgcgcttcca gaccgacctg gtgcggcaac ggctcgcggc gctgcacccc
     4861 gccatcgact tccggaccgc ggtcatcacc acccacggcg accgggatgt ccggacgccg
     4921 ttaccggcga tcggcggcaa gggcgtgttc accgaggagc tcgaaacggc cttgcgcgag
     4981 ggggccatcg acctggcggt tcactccctc aaggatgtgc cggtcgagcc ggcggccggg
     5041 ctgaccctga tcgtcctcgg tccacgagag gatccgcgcg atgtgctcat ctcccgtgag
     5101 ggctggaccc tcgagcgcct gccgccgcgc gccgcggtcg gcacctgcag cacccggcgc
     5161 tcggcccagc tccttgccgt gcggcccgat ctccgactgc tcccgcttcg cggcaacgtg
     5221 gacacccggg tccgtgacgc tctcgcgggc gacttcgatg cgatcgtgat cgccgccgcc
     5281 ggcgtgcacc gccttggact cggcggggcc gtcacccagt acctgcccct ggaggtcatg
     5341 ctgccggccc cggggcaagg tgccctggct gtccagtgcc ggagcgatga cgcagtcctg
     5401 ctccggcaac tcggtggtct cggtaacgac gcggttcagg cggccaccga tgccgagcgg
     5461 gggtttctcg agggtctcgg tggcggatgc gcggcgccca tcgccgcgct gggggaggtg
     5521 tcgggcgacc ggctggagct cgagggcctg gtcgcgtcgc tggatggccg ggaacggatc
     5581 tattgctcgg ccgaagggcc gatgacccag ggccgcgcgc tgggactggc gctcgcggcc
     5641 cgggcgcgaa ccaggggagc ggaggccctg ctcgaatgag cgggctccgc gggcgagcgg
     5701 tggtgatcac ccggtcacgc tcccaggccg gcccccttgc cgaggcactg ctcgagcggg
     5761 gcggcatccc ggtgttcttc cccaccatcg atatccgtcc gctggatgat tgcagcgcgc
     5821 tcgatcgcgc gctccacggg gccgaccgct acgactggat cgtcttcacc agcgtcaaca
     5881 cggtgaatgc ggtgtggggc cggctcgccc gcctgggccg cgtcgagctg acgggcagca
     5941 gccggatcgc cgccgtggga cccgccaccg tcacggccct cgccgagcgg ggcatctcga
     6001 ccacgaccat gccggccgaa ttccggggct cggccatcgc cgcgaccatg ggccaggtcg
     6061 ccgggcggcg ggtgctcctg ccccacgccg ccctcgcgcg ggaagagacg gcggcctccc
     6121 tccgggccgc gggggccatc gtggacgaag tcgtcgccta tcagaccctg ccgccggcgc
     6181 ccgatggcgc gagtctcgcc gcgctcgaag gggagatcga cgcggtgaca ttcacctcgc
     6241 cgtcgacggt ccggaatttc gtcacgcttg ccggaccggg ggccctcgc
//
LOCUS       DATIFF010000505         1415 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_526675, whole genome shotgun sequence.
ACCESSION   DATIFF010000505 DATIFF010000000
VERSION     DATIFF010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1415
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_526675"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1405)
                     /locus_tag="VLD58_07540"
     CDS             complement(<1..1405)
                     /locus_tag="VLD58_07540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54193.1"
                     /translation="MTQSNTDAKGNTTAVAVGGDMAFDQHGNPTKLKVNAGVTRNGKS
                     VSVSGGYEVHATEPREEGGRWVVDWERKLTAGGKGGAKGVSASAEYQSSQFGSRSFKT
                     QAEAVTFQENAATMLPSASHDPSTVAGAMHLEIGEMRGASEGTTLGASAAISPTAGSI
                     GAGAQRSSSSGVKVRRLSPAVFELTKEHGTAGGESLSASTLGAGATGHRERDETASTT
                     IRVDLTTPEGKAAFERFSQSGEVGPGARVVSSSVVKGEQSGTTVSMPGFSHDRTGRTE
                     EELTYDEQGKKERYSGIASESISSSIPWAKGHDNSSMRIDSTELNDRQSYYSITGSVD
                     STEGRKSFEHLAQMTGTVTRDASNAKSSGKWGVEVEITEEIVDAFLARVGSEEVRQAG
                     IFDQTSRNQLRERLRDAKTSDDRKRALAQFFAEGQEGKGIQAVRDTIFGVRNQWAMST
                     DYEMMKSNKGGNFNYDLT"
BASE COUNT          159 a          528 c          455 g          273 t
ORIGIN      
        1 gggtcaggtc gtagttgaag ttcccgccct tgttgctctt catcatctcg tagtcggtcg
       61 acatcgccca ctggttccgg accccgaaga tggtgtcgcg gaccgcctgg atccccttgc
      121 cctcctggcc ttcggcgaag aactgggcca gcgcccgctt ccggtcgtcg ctggtcttgg
      181 cgtcgcgcag ccgctcccgc agctggttgc ggctggtctg gtcgaaaatc ccggcctgcc
      241 ggacttcctc gctcccgacc cgcgccagga aggcgtcgac gatctcctcg gtgatctcca
      301 cctcgacgcc ccatttgccc gacgacttgg cgttgctcgc atcccgggtc accgtcccgg
      361 tcatctgggc caggtgctcg aagctcttcc gtccctcggt ggaatccacg ctcccggtga
      421 tcgagtagta gctctgccgg tcgttgagct cggtcgagtc gatccgcatc gacgagttgt
      481 cgtgcccctt ggcccaggga atgctgctgg agatcgactc cgaggcgatg ccggagtacc
      541 gctccttctt cccctgctcg tcgtaggtga gctcctcttc ggtgcggccg gtgcggtcgt
      601 gggagaatcc cggcatcgag accgtggtgc ccgactgctc ccccttgacc accgagctcg
      661 agaccacccg ggcgcccggt ccgacctcgc ccgactggct gaaccgctcg aacgcggcct
      721 tgccctccgg ggtggtgagg tccacccgga tggtggtgct cgcggtctcg tcccgctcgc
      781 gatgaccggt ggcgccggcg ccgagcgtcg acgcgctgag gctttctccg cccgcggtcc
      841 cgtgctcctt ggtcagctcg aacaccgccg gggagagccg gcggaccttc actccgctcg
      901 agctgctccg ctgcgcgccg gcgccgatgc tccccgcggt cggcgagatc gcggccgacg
      961 cgccgagcgt ggtgccctcg ctggcccccc gcatctcgcc gatctcgagg tgcatcgccc
     1021 cggccacggt ggaggggtcg tgcgaggccg agggcagcat cgtggcggcg ttctcctgga
     1081 acgtcaccgc ctcggcctgg gtcttgaagc tgcggctccc gaactgggag ctctggtact
     1141 ccgccgacgc gctgacgcct ttggccccgc ccttgccgcc ggcggtgagc ttgcgctccc
     1201 agtccaccac ccaccggccg ccttcctccc gcggctcggt cgcgtgcacc tcgtagccgc
     1261 cgctcaccga caccgacttg ccgttccggg tgacccccgc gttcaccttg agcttggtcg
     1321 ggttaccgtg ctgatcgaac gccatgtcac cgccgaccgc gaccgcggtg gtgttgccct
     1381 tggcatcggt gttggactgg gtcaccgcga cgccg
//
LOCUS       DATIFF010000506         2049 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_372680, whole genome shotgun sequence.
ACCESSION   DATIFF010000506 DATIFF010000000
VERSION     DATIFF010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2049
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372680"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1178)
                     /locus_tag="VLD58_07545"
     CDS             complement(<1..1178)
                     /locus_tag="VLD58_07545"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSB54194.1"
                     /translation="MTHVATPPDLEPGRTTPPLPTEQEAREVAEAAREKEWQAPSFVR
                     ELFEGAFRLELVHPFPEVDPREAEKARPFLERLERFMTERVDSDRIDREGQIPPDVIE
                     GLRQLGAFGIKIPEEYGGLGLSQTSYTHAIGLVTSQDGNLTALLSAAQSIGVPQPLKL
                     FGTPEQKKRYLPRLAKGAVSAFALTEANVGSDPAAMTTTAELSADGTHYVLNGEKLWC
                     TNGTIAELMVVMARTGPKRITAFIVETDWPGVQVVQRLHFMGLKALENGVIRFTNVRV
                     PRENVLWGEGKGLKLALVTLNTGRLTLPASCVAASKRCLEIARRWAAERVQWGQPIGK
                     HDAIAQKLGRMAAETFAMEAVSDLASLMADRGNADIRLEAAMAKLWNTEAGWRIVDDT
                     L"
     gene            complement(1175..1849)
                     /locus_tag="VLD58_07550"
     CDS             complement(1175..1849)
                     /locus_tag="VLD58_07550"
                     /inference="COORDINATES: protein motif:HMM:NF037007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HSB54195.1"
                     /translation="MTSPERERNAAKTREAILDAAERLFAEQGYDATSLSQVGKAARV
                     SRATPGYFYGSKPDLYRAVLDRCFGEVLGAVRTGRDRALASGESPEVVLEGAVADYFD
                     FLVARPNFVRLLEREALTARGILPEAAVEVQAGREALAALAVELGLDPGPSGHAAQLL
                     LSIISLCWFPLVHAQTVAPAIGVRLTGPAALAQRKRHVIDLVLYGVLGRPALAPMVPS
                     SAGNPA"
BASE COUNT          291 a          712 c          706 g          340 t
ORIGIN      
        1 agcgtgtcgt ccacgatccg ccagccggcc tccgtgttcc acagcttggc catcgcggcc
       61 tcgaggcgga tgtccgcgtt gccccggtcg gccatgagcg aggcgaggtc ggacaccgcc
      121 tccatggcga acgtctcggc cgccatccgg ccgagcttct gggcgatggc gtcgtgcttg
      181 ccgatgggct ggccccactg cacccgctcg gccgcccagc ggcgcgcgat ctcgaggcag
      241 cgcttcgacg ccgcgacgca ggaggcgggg agcgtgaggc ggccggtgtt gagcgtgacc
      301 agcgcgagct tgagtccctt gccttccccc cagagcacgt tctcccgcgg cacccgcacg
      361 ttggtgaagc ggatgacccc gttctccagc gccttgagcc ccatgaagtg gagccgctgg
      421 acgacctgga cccccggcca gtcggtctcg acgatgaacg cggtgatccg cttcgggccc
      481 gtgcgcgcca tcaccaccat cagctccgcg atcgtcccgt tggtgcacca gagcttctcg
      541 ccgttgagca cgtagtgggt cccgtcggcg gagagctcgg ccgtggtcgt catcgccgcc
      601 gggtccgagc cgacgttggc ctcggtcagc gcgaacgccg ataccgctcc cttcgccagg
      661 cgcggcaggt acctcttctt ctgctccggc gtgccgaaga gcttgagcgg ctgggggacg
      721 ccgatcgact gggcggctga gagcagcgcc gtgaggttgc cgtcctggct ggtgaccagc
      781 ccgatcgcgt gggtgtagct cgtctggctc aggcccaggc cgccgtattc ctcggggatc
      841 ttgatgccga acgcccccaa ctggcgcagc ccttcgatca cgtcgggggg gatctggccc
      901 tcccggtcga tccggtcgct gtccacgcgc tccgtcatga accgctccag ccgctcgagg
      961 aacggccgcg ccttctccgc ctcccgggga tcgacctccg ggaaggggtg caccagctcg
     1021 agccggaacg caccctcgaa caactcacgg acgaaactgg gtgcctgcca ttccttttcc
     1081 cgggcggctt ccgccacttc ccgggcttcc tgctcggttg ggagcggcgg cgtggtccgg
     1141 ccgggctcga ggtcgggggg cgtggcgacg tgggtcatgc tgggttaccg gctgaagatg
     1201 ggaccatggg agccagggcg ggtcgcccca ggactccgta gaggacgaga tcgatcacgt
     1261 gtcgcttccg ctgggccagc gcggctggtc ccgtgagtct gacgccgatg gccggcgcga
     1321 ctgtctgcgc gtggaccagg gggaaccagc agagcgagat gatgctgagg agcagctggg
     1381 ccgcgtgtcc ggacgggccg ggatcgagcc cgagctccac cgccagggcg gccagggcct
     1441 cccgcccggc ctgcacctcc accgccgcct cgggaaggat tccccgggcg gtcaaggctt
     1501 cgcgctcgag caggcgcacg aagttcggcc gggcaacaag gaagtcgaag tagtccgcga
     1561 cggcgccttc caggaccacc tcgggggatt ccccgctcgc cagcgcgcgg tcccggccgg
     1621 ttcgaacggc ccccagcacc tccccgaagc accggtccag cacggcgcgg tagagatcgg
     1681 gcttcgagcc gtagaagtag cccggcgtgg cccgggagac tctcgccgcc ttcccgacct
     1741 gactcaggct ggtcgcatcg tatccctgct cggcgaacag ccgctcggcg gcgtcgagga
     1801 tcgcttcgcg ggtcttcgct gcgttgcgtt cgcgctcggg agaggtcatc ggtgtccctg
     1861 gttccggtgc ggccgtcaaa acttgcttgt tggctagcaa gtatgatgag aaggtctcca
     1921 acccgcaagt ggccgccgac ctggtcggcc caaggccgcg ggtccgaggg gaaccggccg
     1981 actctcttct gatcccgcgt tgccacgtat tcgatcgcat tgtttacaaa gcacaaacga
     2041 aacgttagt
//
LOCUS       DATIFF010000507         5937 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1296650, whole genome shotgun sequence.
ACCESSION   DATIFF010000507 DATIFF010000000
VERSION     DATIFF010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5937
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1296650"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..245)
                     /locus_tag="VLD58_07555"
     CDS             complement(<1..245)
                     /locus_tag="VLD58_07555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HSB54196.1"
                     /translation="MRMTYREAMRTALREALLADSHVFLMGEDVGRYGGAYAVSKGLL
                     EEFGPDRVRDTPLSESGFVGAGIGAALGGMRPIVEVMT"
     gene            complement(236..1255)
                     /gene="pdhA"
                     /locus_tag="VLD58_07560"
     CDS             complement(236..1255)
                     /gene="pdhA"
                     /locus_tag="VLD58_07560"
                     /inference="COORDINATES: protein motif:HMM:TIGR03182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HSB54197.1"
                     /translation="MTTANLARPAAPVAGEIDPATARTCLGQMLLIRRFEEKAAELYS
                     AGKIRGFLHLSIGEEAVSVAAIGALTGRDNVVSTYREHGHALVRGLPPGAIMAELFGK
                     ANGCSRGRGGSMHIFDAARRFYGGNAIVGGGLPLAVGLALADRLQAREAITMCLFGDG
                     AVAEGEFHESLNLAALWHLPVLFLCENNYYAMGTALERHQAETDISLKATAYRIPSMV
                     VDGMDLLATRAAVRQAVDEIRTGNGPVLLECRTYRFRAHSMYDPELYRSKEEVEQWKQ
                     RDPITLFRTRLEESGILSRAEMDRLDDEARTATEQAVAVAEAGGWEPVADLLKDVYAG
                     SAPCA"
     gene            complement(1242..3083)
                     /gene="acsA"
                     /locus_tag="VLD58_07565"
     CDS             complement(1242..3083)
                     /gene="acsA"
                     /locus_tag="VLD58_07565"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF003313.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HSB54198.1"
                     /translation="MEPIHGYAGGSPAGPAGLQPEPVAERSRWIAPPPAGITSPNLPD
                     YEAACAGFSWASARAELDGLPGGGLNIAHEAVDRHATGPDASRVALRWLGRDGNRRDF
                     SFAELKALSNRFANALLGLGIQPGDRVVSVLGRLPELHVAALGTWKLGAVFCPLFSAF
                     GPEPLRTRLEKSGARVLITTSALYQKKVAPVRGALPALEHVILVGGVSAPLAGSGVHD
                     WEVLLTASDPGFTIPATDPETGALIHFTSGTTGMPKGALHVHGAVLAHHVTGRMALDL
                     HPGDIFWCTADPGWVTGISYGVIAPLSNGVTCILDEADFDARRWYELLARERVTVWYT
                     APTAIRMLMKAGPELAREYDLSALRFLASVGEPLNPEAVVWSHEVFGRPFHDNWWQTE
                     TGGIMIANFASTEVRPGSMGRPLPGIEAAIVRRTAEGPVAELPAESVGELALRPGWPS
                     MFRTYWGEPERYAKCFAGGYYLTGDLARRDADGYYWFVGRADDVIKTMGHLIGPFEVE
                     SALLEHPAVAEAAVIGKPDPVAGELVKAFVALKGNFPPDEALRRDLLAFARTRLGAVV
                     APKEIAFLPTIPRTRSGKIMRRLLKARELGLPEGDTSTLEEAGYDHR"
     gene            3321..3581
                     /locus_tag="VLD58_07570"
     CDS             3321..3581
                     /locus_tag="VLD58_07570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54199.1"
                     /translation="MTTETRVTHEASARAEARAALADLLIAYVDRAYVTAGQPGVLTV
                     VRDMFLRMEPEALRDLAFALGLEAEARPEAEEDERRPGPGAP"
     gene            3578..>5937
                     /gene="ppsA"
                     /locus_tag="VLD58_07575"
     CDS             3578..>5937
                     /gene="ppsA"
                     /locus_tag="VLD58_07575"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: protein motif:HMM:NF005057.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008986 - pyruvate, water dikinase
                     activity [Evidence IEA];
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0006090 - pyruvate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HSB54200.1"
                     /translation="MSTVTSACVIPLSSVTLADVDRVGGKNASLGELLRELGGEGVRV
                     PQGFVLTADAFRLHIQEAGLTEWIDRTLAEVDIRDVQALARAGQVIRARVADAPLPPE
                     LVPALEAAYAELSALYGETATDVAVRSSATAEDLPGASFAGQHETYLNVRGLPALDAA
                     VRKCFASLFTDRAIVYRTEKGFAHSKVALSVGVQKMVRSDLGSAGVIFTLDTESGFRD
                     VVLITGAWGIAETLVQGRVVPDEFWVHKPTLRAGFRSILRRERGTKAVKLVYAEGSQR
                     AVKEVAVAEADRQRLVLNDEELLTLARWALAIEDHYSQVAGHPTPMDIEWARDGLSGE
                     LFIVQARPETVHSSKTGTRLELFRRKGAGRVLLRGKSVGQRVGAGPVRVVQSRAELPL
                     VQAGDVLVTRMTDPDWEPVLQRVAAVVTDEGGRTCHAAIVSRELGIPCVVGTGTATTA
                     LPAGQAVTVSCAEGDEGRVYEGTVEFIREEIDPATAPRSPIPLLLNVANPDLAFGLAQ
                     LPSAGVGLLRIEFVISGWIGVHPMAAVHPERVTDPAAQAAIAERWRGYESPAEFFTER
                     LASGVGQIAAAFYPRPVIVRFSDFKTNEYAHLLGGAGFEPHESNPMIGFRGASRYYDD
                     RYREGFALECAAIRRVREVMGLTNLKLMIPFCRTLGEARLVLAELERNGLKRGEDGLQ
                     VYVMCEIPNNVILAAEFAELFDGFSIGSNDLTQLALGIDRDSELLAPLFDERDPGVKR
                     LIAMVVAAAHEAGRPVGICGQAPSDYPEFAEFLAGLGIDSMSLNADA"
BASE COUNT          902 a         2092 c         2025 g          918 t
ORIGIN      
        1 gtcatcactt cgacgatcgg ccgcatgccg cccagcgccg ccccgatgcc cgcgccgacg
       61 aagccggact ccgacaacgg cgtgtcgcgc acccggtcgg gcccgaactc ctcgagcagt
      121 cccttgctga ccgcgtaggc gccaccgtag cgacccacgt cctctcccat caggaagacg
      181 tgcgagtccg ccagcaacgc ctcccggagc gcagtgcgca tcgcttcacg ataggtcatg
      241 cgcatggggc actccccgcg tagacgtcct tgagcagatc ggcgaccggt tcccacccgc
      301 cggcctcagc gacagcaacc gcctgttccg tcgccgtccg ggcctcatcg tcgaggcggt
      361 ccatctcggc ccggctcagg attccactct cctcgaggcg ggtccggaac agcgtgatgg
      421 gatcgcgctg cttccactgc tccacctctt ccttcgagcg atagagctcg gggtcgtaca
      481 tcgagtgggc ccggaagcgg taggtccggc actcgagcag caccggccca ttgccggtgc
      541 ggatctcgtc cacagcctgg cgcaccgctg cccgcgtggc cagcaggtcc atcccgtcca
      601 ccaccatcga ggggatccgg taggcggtcg ccttgaggct gatgtcggtc tcggcctggt
      661 gccgctcgag cgcggtgccc atcgcgtagt agttgttctc gcacaggaac agcaccggca
      721 ggtgccagag cgcggcgagg ttgagcgact cgtggaactc cccttccgcg acggcgccgt
      781 ccccgaagag gcacatggtg attgcctccc gcgcctgcag ccggtccgcc agggccaacc
      841 ccaccgccag cgggagcccg cccccgacga tggcgttgcc gccatagaac cggcgcgcgg
      901 catcgaagat gtgcatcgac ccgccccggc cccggctgca cccgttcgcc ttgccgaaca
      961 gctccgccat gatcgcaccg ggcgggagcc cccggaccag ggcgtgcccg tgctcgcggt
     1021 aggtcgacac cacgttgtcc cgcccggtca gcgcgccaat cgcagcgacc gacaccgcct
     1081 cctcaccgat actcagatgc aggaagccgc ggatcttgcc ggcgctgtac agctcggcgg
     1141 ccttctcttc gaaccgccgg atcaggagca tctgaccgag gcaggtccgc gccgtcgcgg
     1201 ggtcgatctc accagcgacc ggagccgccg gccgcgcgag gttagcggtg gtcatatcct
     1261 gcctcctcca gcgtggatgt gtcgccctcg ggcaggccca gttcccgcgc cttgagcagc
     1321 cggcgcatga tcttgccgct ccgggtgcgc ggaatcgtcg gcaggaaggc gatctccttc
     1381 ggggccacca ccgcgccgag gcgggtgcgg gcaaaggcga ggaggtcgcg gcgcagggcc
     1441 tcgtcgggag ggaaattgcc cttgagggcg acgaacgcct tgaccagctc tcccgccacc
     1501 ggatccggct tgccgatcac ggccgcttcg gcgacggccg ggtgttccag cagcgcgctc
     1561 tccacctcga acggcccgat caggtgaccc atggtcttga tcacgtcgtc ggcccggccg
     1621 acgaaccagt agtagccgtc ggcgtcgcgc cgggcgaggt cgcccgtcag gtagtatccg
     1681 ccggcgaagc acttcgcgta gcgctccggc tcaccccagt aggtccggaa catggacggc
     1741 cagcccggac ggagcgccag ttcgcccacc gactcggcgg ggagctcagc caccggcccc
     1801 tccgccgtgc gccgcacgat cgcggcctcg atgccaggca gcggccgccc catcgagccg
     1861 ggccgcacct cggtggaggc gaagttggcg atcatgatcc cgccggtctc ggtctgccac
     1921 cagttgtcgt ggaacggccg cccgaagacc tcgtggctcc agaccaccgc ctcggggttg
     1981 agcggctcac ccacgctggc caggaagcgc agggccgaga ggtcgtattc ccgcgccagt
     2041 tccggcccgg ccttcattag catccggatg gcggtcggag cggtgtacca gaccgtgacc
     2101 cgctcgcggg cgaggagttc gtaccagcgc cgggcgtcga aatcggcctc gtccaggatg
     2161 caggtgacgc cgttgctgag gggagcaatc acgccgtacg agatgccggt gacccaaccg
     2221 gggtcggcgg tgcaccagaa gatgtcgccc ggatgcaggt ccagcgccat ccggccggtg
     2281 acgtgatgtg ccaggaccgc gccgtgcacg tggagcgcgc ccttgggcat cccggtcgtg
     2341 ccacttgtga agtggatgag cgcccccgtc tcagggtcgg tcgcggggat ggtgaacccc
     2401 ggatcgctgg ccgtgagcag gacctcccag tcatgcaccc cactcccggc aaggggcgcg
     2461 ctgaccccac cgacgagaat cacgtgttcc agcgcgggca gcgcaccccg caccggggcg
     2521 acctttttct ggtacagcgc cgacgtggtg atcaggaccc gggcgccgct cttttccagc
     2581 cgggtccgga gcggctcggg cccgaaggcg gagaacaggg gacagaacac ggcgccgagc
     2641 ttccaggtcc ccagtgcggc aacgtgcagt tcaggcagcc ggcccagcac gctgactacc
     2701 cggtcgccgg gctggatgcc cagtccgagg agcgcgttgg cgaagcgatt cgaaagcgcc
     2761 ttgagctcag cgaagctgaa gtcgcgccgg ttgccgtcgc gacccagcca gcgcaacgcc
     2821 acccggctcg cgtcgggtcc cgtggcgtga cggtcgactg cctcatgggc gatgttgaga
     2881 ccgccgcccg ggaggccgtc aagctcagcc cgggcagatg cccaactgaa gccagcgcag
     2941 gcggcctcgt agtccggcag gtttggagat gttattccgg cgggcggtgg agcaatccag
     3001 cgggatcgct cggcgacggg ctccggttgc agccctgcag gaccggcggg actacctccc
     3061 gcgtaaccgt gaatcggttc cattggtcgc tccccaggtc ccggccggtg cggttgccca
     3121 gccggacctc tcgaaggaga ctccaacatc gtgcccgggg cctgaatcgc gcctgagcat
     3181 ctcgtgaagc ccggctcaac gattccctgt gagaaccatc ggttacggcg tcacccctcc
     3241 ttcccgctcc cttcaggtcc gctgcgctaa gtagtagatg aggtgtgtct tgctgcagtt
     3301 cctctctccc ggaagcaccc atgaccaccg agacccgcgt cactcatgaa gccagcgcca
     3361 gggccgaggc ccgggccgcg ctggccgacc tgctgattgc ctacgtggat cgggcctacg
     3421 taaccgctgg tcagcccggc gtcctcaccg tggtgcgcga catgttcctg cggatggagc
     3481 cagaggctct ccgcgacctg gcctttgcgc tgggcctcga ggccgaggcg cgccccgaag
     3541 cggaggagga cgaacgtcgg cccgggccag gtgcgccatg agcaccgtga cctctgcctg
     3601 cgtcattccc ctttccagcg tcacgctggc ggacgtcgac cgggttggag gaaagaacgc
     3661 ctcgctcggc gagctgcttc gggagttggg cggcgaaggc gtacgggtgc cccagggctt
     3721 tgtccttacc gccgatgcgt tccgcctcca catccaggag gcgggactca cggagtggat
     3781 cgatcgcact ctggcggagg tggacatccg ggacgtgcag gccctggccc gggccggtca
     3841 ggtcatccgt gcgcgggtcg ccgacgcgcc gctcccgcca gagctggtgc ctgccctcga
     3901 ggcggcctac gccgaactgt ccgccttgta cggcgagacg gccacggacg tcgcggtccg
     3961 ctccagcgcc acggctgaag acctgcccgg cgcgtccttc gccggccagc acgagaccta
     4021 cctgaacgtg cggggcctcc ccgcgctcga cgccgccgtc cggaaatgct ttgcgtcgct
     4081 gtttaccgac cgggccatcg tgtaccgcac cgagaaaggc ttcgcccaca gcaaagtcgc
     4141 gctgtctgtc ggggtccaga agatggtgcg cagcgacctg ggctcagccg gggtgatctt
     4201 cacgctcgac accgagagcg gcttccgcga cgtggtgctc attaccggtg cgtggggtat
     4261 cgcggagacg ctggtccagg ggcgagtggt gccggatgaa ttctgggtcc acaagccgac
     4321 gcttcgggcc ggctttcgtt ccatcctgcg gcgggagcgg ggcaccaagg cagtgaagct
     4381 ggtctatgcc gaggggagcc agcgcgcggt caaggaggtc gccgtcgccg aggcggaccg
     4441 gcaacgcctg gtgctgaatg atgaggagct gctgaccctg gcgcgctggg cgctggcgat
     4501 cgaggaccac tactcccagg tcgccggcca cccgacaccg atggatatcg agtgggcccg
     4561 ggacggactg agcggcgagc tgttcatcgt gcaggcgcgc cccgagacgg ttcactccag
     4621 caagaccggc acccggctcg agctcttccg tcgcaaaggc gctggccggg tactgctccg
     4681 cgggaagagc gtgggccagc gtgttggcgc cggccctgtg cgggtggtgc agagccgggc
     4741 ggaactgccc ctggtgcagg ccggcgatgt cctggtcacc cggatgaccg accccgactg
     4801 ggagccggtg ctccaacggg tcgcggccgt cgtcacggac gaaggcggcc ggacctgtca
     4861 cgcggcgatc gtgtcgcggg agctgggaat cccctgcgtc gtcggtaccg ggacggccac
     4921 gaccgccctg cccgcgggcc aggcggtcac ggtatcctgc gccgaaggcg acgagggccg
     4981 ggtgtacgaa gggacggtcg agttcatccg cgaggagatc gacccggcca ccgcacccag
     5041 gtcaccgatc ccgctgctcc tcaacgtggc caaccccgat ctcgcctttg gcctggcgca
     5101 gctgccgtcg gccggtgtgg ggctgctccg catcgagttc gtgatttcag gatggatcgg
     5161 ggtgcacccg atggcagcgg tacacccgga gcgagtcacc gaccctgccg cccaggccgc
     5221 gattgcggag cggtggcggg gttacgagtc tccggccgag ttcttcaccg agcgcctggc
     5281 gtccggcgtg gggcagatcg ctgccgcgtt ctacccccgg cccgtgatcg tccgcttctc
     5341 cgacttcaag accaacgagt acgcccatct cctgggcggc gccggtttcg agccgcacga
     5401 gtccaacccc atgatcggct tccgtggcgc ctcgcgctac tacgacgatc gctaccgcga
     5461 gggctttgcc ctcgagtgcg ccgcgatccg ccgggtccgc gaggtcatgg ggctcaccaa
     5521 cctcaagctg atgatcccgt tctgccgcac cctcggcgag gcccgcctgg tgctggcgga
     5581 gctggaacgc aacggactca agcggggcga ggacgggctc caggtctatg tgatgtgcga
     5641 gatcccgaac aacgtgatcc tggcagcgga attcgccgag ctgttcgacg gcttctcgat
     5701 cggatcgaac gacctcaccc agctggcgct gggcatcgac cgcgactccg agctgctcgc
     5761 gccgctgttc gacgagcgcg accccggcgt gaagcgactg atcgccatgg tcgtggcggc
     5821 ggcccatgag gccggccggc cggtcggcat ctgcggccag gcgccgagcg actatcccga
     5881 gttcgccgaa ttcctggccg gactgggcat cgacagcatg tcgctgaatg ccgacgc
//
LOCUS       DATIFF010000508         2174 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_66494, whole genome shotgun sequence.
ACCESSION   DATIFF010000508 DATIFF010000000
VERSION     DATIFF010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2174
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66494"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1262
                     /locus_tag="VLD58_07580"
     CDS             <1..1262
                     /locus_tag="VLD58_07580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54201.1"
                     /translation="RDSSFWLAAARLAFSLRWNNQEIPESLREQLHRHRDQLPARERL
                     EVEAHQALAGRGVSASLVAHRALVSQFPESWFGWLSYGDVLFHNGPSTGASLEDARSA
                     FRRVMDLNPRLAPGWDHDALLAALARDSVRLRIGLAALERMRPRPKDEYADKVLAFRL
                     LDALVRHDSVAEAAALDSMAHDKVRYGRQVQTFYDPVRFGFPLSQIKLSRAVLAYGGG
                     ALAEHELRLQIAQAFAAAGQWDSAFAVAPTGLDRYRLGVLAAALGVVPWARALELRPP
                     GGPDPEWAFLDGVAAAATGDSRGAAAAMARLTALRTPAGRVGAEALRWMARAAAGDSV
                     HAGRGLADLEWKLAQWNYQGAEALPILPPLDRILGARWLAVAGERDEARRLLHWADSP
                     FLITPSMDYMSPVRPYLHRQLGLLGGP"
     gene            1320..>2174
                     /locus_tag="VLD58_07585"
     CDS             1320..>2174
                     /locus_tag="VLD58_07585"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HSB54202.1"
                     /translation="MSNPSIPTPAPAVPAAPIAAGLGRTQLLDLYYWMRLTRSLEERL
                     VSLHRQGKVVGGLFRSLGQEADAVGSAFALDRSKGDILSPLIRNLGSMLVMGATPLEV
                     LRQYMAKAKSPTAGRELNIHFNDLERGFLGQISHLGDMVPVMAGIALTFKLRKEPRVG
                     MVYVGDGAMSTGAFHEGVNFAAVQQVPLVIICENNGYAYSTPTRLQTAAKSLMDRAVG
                     YGISGVLADGNDVLAVYEVTKTAVDRARSGGGVTLIELITYRRKGHAEHDNQSYVPPA
                     EIARWEAKD"
BASE COUNT          309 a          755 c          747 g          363 t
ORIGIN      
        1 cccgcgattc cagcttctgg ctcgcggcgg cgcgcctggc cttctcgctt cgatggaaca
       61 accaggagat tcccgaatca ctccgggagc agctccatcg tcaccgggac cagcttccgg
      121 cccgggagcg gctggaggtg gaagcccacc aggccctggc gggccgcggg gtatcggcct
      181 cgctcgtcgc ccaccgggcc ctggtcagcc agttccccga aagctggttc ggctggcttt
      241 cctacggcga tgtcctgttt cataacgggc cgagcacggg cgcgtcgctc gaggatgccc
      301 ggagcgcgtt tcgcagggtc atggatctga acccgaggct cgcacccggg tgggaccacg
      361 atgccctgct ggcggcgctt gcgagggaca gcgttcgcct gcgcatcgga ctggccgccc
      421 tggagcggat gcgcccgcgg cccaaggatg agtatgccga caaggtgctc gccttccgcc
      481 tgctcgatgc cctggtccgc cacgattccg tcgcggaggc tgccgcgctg gactcgatgg
      541 cgcacgacaa ggtgaggtat gggcgacagg tgcagacgtt ctacgatccg gtgcggttcg
      601 gtttcccgct gtcgcaaatc aagctgtcgc gggcggtgct cgcgtacggt ggcggcgccc
      661 tcgcggagca tgaactcagg ttgcagatcg cccaggcgtt cgccgcggcc ggtcaatggg
      721 actcggcctt cgccgtggcc ccgaccggcc tcgatcgcta tcgcctcggg gtcctggccg
      781 cggccctcgg ggtcgtgccc tgggcgcggg cgctcgagct gcggcctccc ggaggtcccg
      841 acccggaatg ggcgttcctc gatggcgtgg cggccgccgc caccggcgat tcgcggggcg
      901 ccgcggctgc gatggcccga ctgaccgcgc ttcggacgcc tgcaggccgg gtcggcgccg
      961 aggcgctccg ttggatggcc cgtgccgccg cgggagactc ggtgcacgcc ggccgtggac
     1021 tcgcggacct ggagtggaag ctggcgcagt ggaactacca gggggccgag gcgctcccca
     1081 tacttccccc gctcgatcgg atcctcgggg cgcgctggtt ggccgttgca ggcgagcgcg
     1141 acgaggccag acgcctcctg cactgggcgg attcaccgtt cctgatcacc ccgtcgatgg
     1201 actacatgtc gccggtcaga ccgtatcttc accggcaact ggggctgctc ggcggacctt
     1261 gacgcggccc gaggtcctcg cttgactcgc ctccgccgtc tcccgatctt ccccgccgct
     1321 tgagcaaccc ctcgatcccc acccccgccc ccgcggtccc cgccgcgccg atcgccgccg
     1381 gtctcggccg gacgcagctg ctcgacctct attactggat gcggctgacc cgctccctcg
     1441 aggagcggct ggtgagcctt catcgccagg gcaaggtggt cggggggctg ttccggtcgc
     1501 tggggcagga ggccgatgcc gtcggcagcg ccttcgcgct cgatcgcagc aagggcgaca
     1561 tcctttcccc gctgatccgc aatctcggct ccatgctggt catgggagcc acacccctcg
     1621 aagtcctgcg gcagtacatg gccaaggcga agagtcccac cgccggccgc gagctcaaca
     1681 tccatttcaa cgatctcgag cgcggcttcc tgggacagat ctcccacctg ggtgacatgg
     1741 tgccggtgat ggccgggatc gcgctcacct tcaagctccg gaaggagccc cgcgtcggca
     1801 tggtgtacgt gggagacggg gcgatgagca ccggcgcctt ccacgaaggt gtcaatttcg
     1861 ccgcggtgca gcaggtgccg ctggtgatca tctgcgagaa caacggctac gcctacagca
     1921 cccccacccg gctccagacc gcggcaaaga gcctgatgga tcgcgcggtc ggctacggca
     1981 tttccggtgt cctcgccgat ggtaacgatg tgctggcggt gtacgaagtg acgaagacag
     2041 cagtcgatcg ggcccggtcg ggtggtggcg tcaccctcat cgagttgatc acctaccggc
     2101 ggaagggcca cgccgagcac gacaatcagt cttatgtgcc gcccgccgag atcgcgaggt
     2161 gggaggcgaa ggat
//
LOCUS       DATIFF010000509         2794 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_66658, whole genome shotgun sequence.
ACCESSION   DATIFF010000509 DATIFF010000000
VERSION     DATIFF010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2794
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66658"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="VLD58_07590"
     CDS             complement(<1..280)
                     /locus_tag="VLD58_07590"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HSB54203.1"
                     /translation="MHLRFTTAGESHGKGYVTIVEGLPAGLPVSAEWVDRDLARRMQG
                     YGRGARMKIERDHIEWLAGVRAGETLGSPVAMLIHNRDWANWEDVMAAE"
     gene            complement(415..2205)
                     /locus_tag="VLD58_07595"
     CDS             complement(415..2205)
                     /locus_tag="VLD58_07595"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMIN domain-containing protein"
                     /protein_id="HSB54204.1"
                     /translation="MTGLYRMILSSLLLGASLVAARPARAEGPGSGEVTAVSLAPAAG
                     KAEVVIAIRGAVEVKDFLLTSPDRLVLDVVGATLSQNAPAVYDGVKRGGVTNLRYSQF
                     RPDVVRIVLDLDGPTTYEVQRAGDAIRVAFGTGARFQAWTSSEAHAELAADEAPAAAP
                     AARRPEVAMPAGRAAMLTRADEPRITVTWDRASIADVVAGFAAFSGRTIILGKDIKGE
                     VTAEVKNQPWPMAFQAVLASQGLSAQEMAGGIIRVDAPSVLSALDSLEPLETSLIRIN
                     YAQAGSLSKTVESILTKGRGRVVADTASNALIITDTRSRLAGVTDFVRGLDIRTPQLS
                     IQAKIIFVDRTDIEALGLKYDLGDRHQFFNKLVQRTDPATGDSYDRNVNVVDLGGNTI
                     SAIGNADATIKNSALDLIYSTTIGGFALTTFLSALETSELADIQAEPVISTLDNRQAD
                     ILVGEETPVRVIDASSTSSSGGARANVQFKETGIRLTVTPHVTNNRQIMMQLHTERSA
                     LQLLAEADLGFIFQKQKADNQLLVNDGETAVIGGLTVTEVNKTRSGIPLLSGLPIVGR
                     LFSNTSESERRRDLIILVTPRITDDGASLE"
     gene            complement(2202..>2794)
                     /locus_tag="VLD58_07600"
     CDS             complement(2202..>2794)
                     /locus_tag="VLD58_07600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54205.1"
                     /translation="LPPRRDRPVARNSLLAIALIATLSSAACAGQDDEAGVTTATGHS
                     TLAALTPPADSTRPRPDSARVDSVRADSIAAAAGLTDSLRRAREIEVMRETFAYGGGT
                     RDPFASLINSDRSGPEFADLELVGVYQNLRTPANSIIVLREKVTAKRYKLRAGDQVGR
                     ARLVQIRPRDAVFTIQDFGFERQETLSLRKQEVETP"
BASE COUNT          385 a          922 c         1032 g          455 t
ORIGIN      
        1 cctcggcggc catcacgtcc tcccagttgg cccagtcgcg gttgtggatc agcatggcca
       61 cgggcgagcc gagggtctcg ccggcgcgga ccccggcgag ccactcgatg tggtcgcgct
      121 cgatcttcat ccgggcgccc cggccatacc cctgcatccg gcgggcgagg tcgcgatcga
      181 cccactcggc ggagaccggg aggccggcag ggaggccctc cacgatggtc acgtacccct
      241 tgccgtggga ttcgccggca gtggtgaagc gaaggtgcat ggggcctcgg tggcagggcg
      301 gcgcaagggt gcaagggcgc aacgagcccg aaaggtgaaa ggcggaacgg cggaacgcta
      361 ccccgttccg ccgtccgccg tgctttttgg tctttgcgcc tagggcccta gcgcctactc
      421 cagcgacgct ccgtcgtcgg tgatgcgcgg cgtgaccagg atgatcaggt cgcggcgccg
      481 ctcgctctcg ctggtgttgc tgaacagccg gccgacgatg gggaggccgc tgaggagcgg
      541 gatcccggac cgggtcttgt tcacctcggt gaccgtgagg ccgccgatga ccgcggtttc
      601 gccgtcgttc accaggagct ggttgtcggc cttctgcttc tggaagatga agcccaggtc
      661 ggcctcggcc agcagctgca gcgccgagcg ctcggtgtgg agctgcatca tgatctgccg
      721 gttgttggtc acgtgggggg tgaccgtcag ccggataccg gtctccttga actgcacgtt
      781 ggcgcgggcg ccgccgctcg agctggtgct cgaggcgtcg atgacgcgca ccggggtttc
      841 ctcaccgacc aggatgtccg cctggcggtt gtccagggtc gagatgaccg gctcggcctg
      901 gatgtcggcc agctcgctgg tctccagcgc gctcaggaag gtggtgagcg cgaacccgcc
      961 gatcgtggtc gagtagatca ggtccagcgc cgagttcttg atcgtggcgt cggcgttgcc
     1021 gatggcggag atggtgttgc cgcccaggtc caccacgttg acgttccggt cgtagctgtc
     1081 gccggtggcc ggatcggtgc gctgcaccag cttgttgaag aactggtggc ggtcgcccag
     1141 gtcgtacttc aggccgagcg cctcgatgtc ggtccggtcg acgaagatga tcttcgcctg
     1201 gatcgagagc tgcggggtcc ggatgtcgag cccgcgcacg aagtcggtga cgccggccag
     1261 ccggctccgg gtatcggtga tgatgagggc gttggaggcg gtgtcggcca ccacccggcc
     1321 ccggcccttg gtcaggatgc tctcgaccgt cttggagagc gacccggcct gggcgtagtt
     1381 gatccggatc aggctggtct ccagcggctc gagcgaatcg agggcggaga gcaccgaggg
     1441 ggcgtccacc cggatgatgc cgcccgccat ctcctgggcc gacaggccct ggctggcgag
     1501 cactgcctgg aaggccatcg gccagggctg gttcttcacc tcggcggtga cctcaccctt
     1561 gatgtccttg cccaggatga tggtgcgccc gctgaaggcg gcgaatccgg ccaccacgtc
     1621 ggcgatgctg gcgcggtccc aggtgacagt gatccgcggc tcgtcggcgc gggtcagcat
     1681 cgccgcccga ccggccggca tggcgacctc ggggcgacgg gcggccggcg cggccgccgg
     1741 ggcttcgtcg gcggccagct cggcgtgggc ctcgctggac gtccaggcct ggaaccgggc
     1801 cccggtgccg aaggcgaccc ggatcgcgtc accggcgcgc tggacctcgt acgtcgtggg
     1861 gccgtcgagg tcgagcacga tccggacgac gtcgggccgg aactgggagt agcggagatt
     1921 ggtcaccccg ccgcgcttca cgccgtcata cacggcgggc gcgttctggc tcagggtggc
     1981 gcccaccacg tcgagcacca gccggtcggg cgaggtgagg aggaagtcct tcacctccac
     2041 ggcgccgcgg atggcgatca ccacttccgc cttgccggcg gcgggggcca gactgacggc
     2101 ggtcacctct ccgctgccgg gcccttcggc ccgcgctggc cgggcggcga cgaggctcgc
     2161 cccgagcagc agcgaggaaa ggatcatgcg atacaatccg gtcatggcgt ctcgacctcc
     2221 tgcttccgca gcgagagagt ttcctggcgc tcgaacccga agtcctgaat cgtgaacacg
     2281 gcatcacggg gccggatctg caccagccgg gcccgaccca cctgatcacc tgcccgcaac
     2341 ttgtaccgct tggcggtgac cttctcccgc agcacgatga tgctgttggc gggagtgcgg
     2401 aggttctggt agacccccac cagctccaga tcggcgaact ccggcccgct gcggtccgag
     2461 ttgatcagcg aggcgaacgg gtcgcgggtg ccgccgccgt acgcgaaggt ctcgcgcatg
     2521 acttcgatct cgcgcgcccg gcggagggaa tcggtcagcc ctgccgcggc ggcgatgctg
     2581 tcggcccgga cgctgtcgac gcgggcgctg tcgggccggg ggcgcgtcga gtcggcgggt
     2641 ggcgtcagcg cggccagagt gctgtggccg gttgccgtgg tcaccccggc ctcgtcgtcc
     2701 tgaccggcgc aggcggccga gctcagggta gcgatcagcg cgatcgccag gagcgagtta
     2761 cgagccactg gacggtccct ccggggcgga agac
//
LOCUS       DATIFF010000510         2852 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2219503, whole genome shotgun sequence.
ACCESSION   DATIFF010000510 DATIFF010000000
VERSION     DATIFF010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2852
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2219503"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            107..1312
                     /locus_tag="VLD58_07605"
     CDS             107..1312
                     /locus_tag="VLD58_07605"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSB54206.1"
                     /translation="MTPDIDLTVYPDECDAFGHLNQASFLSLFERARWEMLLRGPGMD
                     VFSRVGAWPAVRKTVIDYHAAAFPGDMLRFHQALTHVGRTSFTMRQTARRVKDDVLIA
                     TAEFVFVCVNRDGRPVPVPTEFSGFMGARPGRPDDGQRFTVNGVNLAVEVRGEGPVVL
                     FVHGYPFDRSIWSHQVAALEGFRRVAPDLRGMGASDAPDLGYSMEIYAADLAALLDAL
                     GVDEVVLCGLSMGGYVAFEFLRRWRNRVRGLVLMDTRAEADTAEGRRARDAAAAEARE
                     HGAGAIADAMIPRILGASTRSGASLTVERVRAMMAATPVAGIVGALAAMRDRPDSTPL
                     LPELTGLPTLVLVGEEDEITPPSAARAMAEAISGARLVLVPGSGHLPPVERPVETTRA
                     LLEFLRSLR"
     gene            complement(1521..1784)
                     /locus_tag="VLD58_07610"
     CDS             complement(1521..1784)
                     /locus_tag="VLD58_07610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HSB54207.1"
                     /translation="MTYVIVEACIGVKDRACVDVCPVDCIYEGEDQLYIHPDECIDCG
                     ACEPECPVTAIFPEEDVPPNMTSYIEKNKEVFNSDTPPGRPKR"
     gene            1888..>2852
                     /locus_tag="VLD58_07615"
     CDS             1888..>2852
                     /locus_tag="VLD58_07615"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HSB54208.1"
                     /translation="MACLSQFSFILAILLVFGPAPTLEGQSCPAPRTALVLSGGGAKG
                     LAHVGVLRTMDSLGIRPDLIVGTSMGAAVGALYASGYSGRELDSLARIVPLAQLFRTY
                     QPRAPRSLGVLQPLVVWEQGEHRFNLQSAAIVESEVNALVNAAMLQGNLLARGNFDSL
                     PIPFRAVATDLATREPVVLASGDLAQAVRASIAVPLLFNPEQREGRYLVDGGLSANVP
                     VAIARAAGAERVIVSDATEHLPEDFDPYAPLLVADRLVRFLFLQRADSLGPGDLLVRP
                     AVEGFNSLNFSRSSIARLLAVGRAAADTVLAPPRCRAASVAAAHP"
BASE COUNT          387 a         1035 c          947 g          483 t
ORIGIN      
        1 ggtggaggta agggttcggt ggctcgccaa gcgggcacga ggctgtagta tatcaagctg
       61 gcgtctccca ggctgagccg atcgccgatc gcggagagct ccgaccatga ctcccgacat
      121 cgacctcacg gtctatcccg acgaatgcga cgccttcggc cacctcaacc aggcgtcgtt
      181 tctcagcctg ttcgagcggg cccggtggga aatgctgctc cgcggaccgg ggatggacgt
      241 cttcagccgg gtcggcgcct ggcccgcggt ccggaagacg gtgatcgact accatgccgc
      301 ggcgttcccc ggcgacatgc tccggtttca ccaggcactc actcacgtcg gccgcaccag
      361 cttcaccatg cggcagaccg cccgccgggt gaaggacgac gtgctcatcg ccaccgccga
      421 gttcgtgttc gtctgcgtca accgcgacgg ccgcccggtc ccggtgccga ccgagttcag
      481 cgggttcatg ggtgcccggc ccggacgccc ggacgacggg cagcgcttca ccgtcaacgg
      541 ggtcaatctg gcggtcgagg tccgtggcga aggaccggtg gtgctcttcg tgcacggcta
      601 cccgttcgac cggtcgatct ggtcccatca ggtcgcagcg ctcgaggggt tccggcgagt
      661 cgcccccgac ctccgcggca tgggcgcttc cgacgccccc gacctgggct acagcatgga
      721 gatctacgcc gccgacctgg cggcgctgct cgatgcgctg ggggtagacg aggtggttct
      781 gtgcggactg tcgatgggcg ggtacgtcgc cttcgagttc ctgcgccgct ggcgcaaccg
      841 ggttcgcggc ctcgtactca tggatacccg ggccgaggcc gacaccgccg agggacggcg
      901 ggcccgggat gccgccgcgg ccgaggcccg cgagcacggc gccggggcga tcgccgacgc
      961 gatgatcccc agaattctcg gcgcctccac ccggagcggt gccagtctca cggtggaacg
     1021 ggtccgcgcc atgatggccg cgaccccggt agcgggcatc gtcggtgccc tcgccgccat
     1081 gcgggaccgc cctgacagca ccccgctgct cccggagctg accggcctgc ccaccctggt
     1141 gctggtgggg gaagaggacg agatcacccc gccgtcggcc gcccgggcga tggccgaggc
     1201 gatttccggc gcccgcctcg tcctggtgcc cggtagcgga catctgcccc cggtggagcg
     1261 tccggtcgag accacccggg ccctgctcga gttcctccgg tccctgcgct gaaacctttt
     1321 tccccgcccc ggcgttagac agggtgacgg gaacatcatg gaccacccgg tcccgctgat
     1381 cgcaccgttc cttccaatga cggctccgta ctcgcggcca tgcagttcga gtgcggagcc
     1441 gctctccttt tgcgccacga ccccccggat gcctcaccgg ggggtcgtct ggaaacgggc
     1501 tggcagcgag ctaccggcga ttatcgcttc ggccgtcccg gcggcgtatc gctgttgaag
     1561 acctctttgt tcttctcgat gtaggacgtc atgttgggcg gcacgtcctc ctcggggaag
     1621 atggccgtca ccgggcattc gggctcgcag gcgccgcagt cgatgcactc atcgggatgg
     1681 atgtacagct gatcctcgcc ctcgtagatg cagtccaccg gacagacatc cacgcaggcc
     1741 cggtccttca ccccgatgca ggcctcgacg atcacgtagg tcattgctgc ccgtcctcag
     1801 aaagttggcg gcgtggtcca gccgtattcg caaaggtata ggggtctcac cggggcggcg
     1861 caaggggccg tagtatctta ccgggtcatg gcctgcctgt ctcaattttc gttcattctc
     1921 gcgatcctcc tggtgttcgg accggcgccc acgctcgagg gacagagctg tccggccccc
     1981 cggacggcgc tggtgctctc cggcggcggc gccaagggcc tggcgcatgt gggcgtgctc
     2041 cggaccatgg atagcctggg catccgcccc gacctcatcg tcggcaccag catgggcgcc
     2101 gcggtgggcg cattgtacgc cagcgggtac agcggccggg agctcgactc gctggcgcga
     2161 atcgtccctc tcgcccagct gttccggacc tatcagcccc gggcgcctcg gtcgctcggc
     2221 gtgctccagc cattggtggt ctgggagcag ggagaacacc gcttcaatct ccagagcgcg
     2281 gcgatcgtcg agtccgaggt caacgccctg gtcaacgccg cgatgctgca gggcaacctc
     2341 ctcgcgcggg gaaacttcga ctccctcccc attccctttc gggccgtcgc aaccgacctc
     2401 gccacccggg agccggtggt cctcgcctcg ggcgatctgg ctcaggccgt ccgcgccagc
     2461 atcgccgtgc cgctgctgtt caacccggag caacgggagg ggcgctacct ggtggacggc
     2521 ggactgtcgg ccaatgtccc cgtggccatc gcccgcgctg ccggcgcgga gcgggtgatc
     2581 gtctccgacg ccaccgagca tctgcccgag gatttcgatc cctacgcgcc actcctcgtc
     2641 gccgaccggc tggtgcgctt cctcttcctc cagcgggccg actcgctcgg cccgggcgac
     2701 ctcctggtcc ggcccgcggt cgaggggttc aacagcctca acttctcccg ctccagcatc
     2761 gcgcgcctgc tcgcggtcgg cagggccgcc gcggacaccg tcctggcccc gcctcgctgc
     2821 cgcgcggcct cggtggcagc cgcccacccc ca
//
LOCUS       DATIFF010000511         1456 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_373686, whole genome shotgun sequence.
ACCESSION   DATIFF010000511 DATIFF010000000
VERSION     DATIFF010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1456
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_373686"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(114..473)
                     /locus_tag="VLD58_07620"
     CDS             complement(114..473)
                     /locus_tag="VLD58_07620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54209.1"
                     /translation="MKRWLGLDLVDLIIHVGITAAVAAFAASTIRGPDGDSAVAFVIA
                     ASFAALAWRRARARRHAEELPDPDRLAELEARVADLEQGHDRLVELEERLDFTERMLV
                     RQREQDPARLGPGREEA"
     gene            complement(470..766)
                     /locus_tag="VLD58_07625"
     CDS             complement(470..766)
                     /locus_tag="VLD58_07625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54210.1"
                     /translation="MDFETILKVIMIAVAAVGIPVGAYAAIAATRSIWGRPGSSSEKA
                     GDPAELAALRARLAELEPLEARMAELEERLDFAERMLVQQREADRLPAGRKDLA"
     gene            complement(773..1039)
                     /locus_tag="VLD58_07630"
     CDS             complement(773..1039)
                     /locus_tag="VLD58_07630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54211.1"
                     /translation="MERLLIENLATIVAITALLGAVALGPIGRAIARRIEGRLHGGPD
                     QEVDRYLLELEQTRQRLLELEERMEFTERLLARGDAREIGRPGP"
     gene            complement(1041..>1456)
                     /locus_tag="VLD58_07635"
     CDS             complement(1041..>1456)
                     /locus_tag="VLD58_07635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54212.1"
                     /translation="AGRPAMMQATPQPEIPTPPPAPPEPPDHVIVQVPPSFPTPPPWV
                     TLPPQVTLLIVLGFFAACAVVLFPLMRAIARRIEGRHTGVDGAGRAELEQLRNRVSDL
                     EALPVRVLELEERVDFAERLLAQRREPERLDRGSS"
BASE COUNT          231 a          542 c          480 g          203 t
ORIGIN      
        1 cgcctgggcc agtgggccga gcagcttcca cgcgagcgcg gcgcacccga gcagggtgag
       61 ggtgatcagg aagagctgag cactgtcgtt gaacagcagg gccacgctca gcatcatgcc
      121 tcctctcgcc ccggaccaag ccgcgccggg tcctgttcgc gctggcggac cagcatccgc
      181 tcggtgaagt ccaatcgctc ctccagctcc accaggcgat cgtgcccctg ctccagatcg
      241 gccacccggg cttccagctc cgccaggcga tccgggtcgg gcagctcctc cgcgtgcctg
      301 cgggcccggg cccgacgcca ggcgagagca gcgaaagacg ccgcgatcac gaacgccaca
      361 gcggagtcgc cgtccggccc gcggatcgtc gaggctgcaa acgccgccac cgccgcggtg
      421 atcccgacgt ggatgatcag gtcaacgagg tcgagcccca gccacctctt catgccaggt
      481 ccttccggcc tgcggggagg cgatccgcct cgcgctgctg caccagcatc cgttcggcga
      541 aatccagccg ctcctccaat tcggccatcc tcgcctccag cggctcaagc tccgccagtc
      601 gcgcccggag cgccgccagc tcggcgggat cgcccgcctt ctccgacgag gagccgggcc
      661 ggccccagat ggaccgggtc gcggcaatgg cggcataggc gccgaccggg atgcccaccg
      721 cggccacggc gatcatgatg accttgagga tcgtttcgaa atccatggca gatcacgggc
      781 cagggcggcc gatttcccgc gcgtccccac gggcaagcag ccgttcagtg aattccatcc
      841 gctcctccag ctccagcagg cgctgccggg tctgttccaa ctcgagcagg taccggtcga
      901 cctcctggtc cggtcccccg tggagtcgcc cctcgatccg cctcgcgatc gcgcggccga
      961 tcggtcccag agccaccgca ccgaggaggg cggtaatggc cacgatcgtg gcgagattct
     1021 cgatcaggag ccgttccata ctatgacgat ccccggtcca gccgctcggg ctcccgccgc
     1081 tgcgccagca gccgctcggc aaaatccacc cgttcctcca gctcgagcac ccggaccggc
     1141 agcgcctcaa ggtcggagac gcggttgcga agctgctcca gttccgcccg gccggctccg
     1201 tcaaccccgg tatgccgccc ctcgatccgc cgggcgatgg cccgcatgag tggaaagagc
     1261 accacggcgc aggcggcgaa gaagcccagg acgatgagca gcgtcacctg cggcggcagc
     1321 gtcacccagg gaggcggcgt gggaaagctc ggcggcacct gcacgatcac gtggtcaggt
     1381 ggctccgggg gcgccggcgg tggggtcggg atctcaggct ggggcgtggc ctgcatcatg
     1441 gcgggtctcc cggcaa
//
LOCUS       DATIFF010000512         1142 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1758176, whole genome shotgun sequence.
ACCESSION   DATIFF010000512 DATIFF010000000
VERSION     DATIFF010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1758176"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..514
                     /locus_tag="VLD58_07640"
     CDS             <1..514
                     /locus_tag="VLD58_07640"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HSB54213.1"
                     /translation="FTTGGTWWWGQGSPLTADVKTDYKTVRDYFIRAAEKMPEADYGF
                     RPAPEVRSFGQQVAHVADDQYNVCAPAKGETRKAAYREIETTLSAKADLVAAVKAAFA
                     YCDGAYDALTDATGAETVTFGGQPRTRFAMLNWNLWHTWEHYGNVVVYLRMKGLVPPS
                     SEPMPGMPMK"
     gene            complement(525..>1142)
                     /locus_tag="VLD58_07645"
     CDS             complement(525..>1142)
                     /locus_tag="VLD58_07645"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HSB54214.1"
                     /translation="SSTQLICVAYHYDREVAHPLASLLPPILVVGGEELGESSPVQAA
                     LRLLRHELTARSPGWGTIVNRLIDVLFVQVIRAWVGVQREDDASWLRALRDPIVARVL
                     TAMHADPAAPWTIDRLAAQANLSRATLTRRFGGLVGEAPLAYLTRWRMELAARDLRET
                     DDPVGAIGRRVGYTSEFAFSRAFSRLRGRPPGRYRAELRERAAAP"
BASE COUNT          193 a          395 c          406 g          148 t
ORIGIN      
        1 gttcacgacc gggggaacgt ggtggtgggg acaaggcagt cccctgactg cggatgtgaa
       61 aacggattac aagaccgtca gagactattt catccgagcg gcggagaaga tgcccgaggc
      121 cgactacggc ttcaggccgg cgcccgaggt gcggagcttc ggccagcagg tggcgcacgt
      181 cgccgacgac caatacaacg tgtgcgcccc ggccaagggt gagacgcgga aggccgcgta
      241 ccgggagatc gagactaccc tgtccgccaa ggccgacctc gtcgccgcgg tcaaggcggc
      301 gttcgcgtac tgtgacggcg cctacgacgc gctgacggat gccacgggcg cggagacggt
      361 caccttcggg ggccagccca ggaccaggtt cgcgatgctg aactggaacc tgtggcacac
      421 ctgggagcac tacggcaacg tcgtggtgta tctgcgaatg aagggcctgg tcccaccctc
      481 gagtgagccg atgccgggga tgccgatgaa gtgaccccgg ggcgctaggg cgccgccgct
      541 ctctcccgca gctcggcccg gtaacgtccg ggcggccgcc cccgcagccg ggagaacgcc
      601 cgcgagaagg cgaactcgga ggtgtagccc acccggcgcc cgatggcgcc gacggggtcg
      661 tcagtctccc ggagatcccg ggccgcaagc tccatgcgcc accgggtgag gtacgccagc
      721 ggcgcttcgc cgaccaggcc cccgaaccgc cgggtcaggg tcgctcgcga caggttcgcc
      781 tgggcggcca gccggtcgat ggtccagggc gcggccgggt ccgcgtgcat cgcggtcaga
      841 acccgggcga cgatcggatc gcgcagcgcc cggagccacg acgcgtcgtc ctcccgctgg
      901 acccccaccc aggcccggat cacctgcacg aagagcacgt cgatcagccg attgacgatc
      961 gtgccccacc cggggctcct ggccgtgagt tcgtggcgca gcaggcggag cgccgcctgg
     1021 accgggctgc tctcgcccag ctcctctcct cccaccacca ggatcggcgg cagcagcgaa
     1081 gccagcggat gggccacctc gcggtcatag tgataggcca cgcagatgag ctgggtcgag
     1141 ct
//
LOCUS       DATIFF010000513         3417 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2219874, whole genome shotgun sequence.
ACCESSION   DATIFF010000513 DATIFF010000000
VERSION     DATIFF010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3417
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2219874"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..891
                     /locus_tag="VLD58_07650"
     CDS             <1..891
                     /locus_tag="VLD58_07650"
                     /inference="COORDINATES: protein motif:HMM:TIGR04018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YpdA family putative bacillithiol disulfide
                     reductase"
                     /protein_id="HSB54215.1"
                     /translation="LLDRRTVVSTIERYPLGMTFFSTPEKIEIGGVPFIASGEKPTRR
                     DGLLYYRRVAEAFRLDARPGEEVTSVVRQGDRFRVEVRRRHDTTAYDAGAVVFATGYY
                     DWPNPLNVPGEELPHVAHYFTEGHRHWHQDVVVIGAGNSAVDAALECWRAGSRVALVH
                     FGEGFDKVVKPWVLPDITNRVKEGSIKAWWRHRVTRITPATVELEPVSGGKAVSIPAD
                     AVLAMTGYHADTTLLEQLGVPVDRASGIPAHDEATMMTAVPGAYLAGVIASGKDANRL
                     FIENARGHGELIVRDVLRRR"
     gene            complement(1021..2949)
                     /locus_tag="VLD58_07655"
     CDS             complement(1021..2949)
                     /locus_tag="VLD58_07655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54216.1"
                     /translation="MSTRLLRDRRGIALITTLLVTFAVSAIAIAAVMMTLNANLIGKN
                     AERAQSVDAAALAGLEEARSAINGNRALYPNSGYTTLESNATVKNASNAVIPNITRSI
                     WVGPSGITTGQYGIVGSIIAQARDIYGNKVLRRLEINQESFSKFSYFTDIEEDTAGTV
                     LSFLNNDQVRGPVHTNDTIRIASSGATFYDEVTSARSTMIGQSNGTFTKPPKLGVSRI
                     PMPTVTDLNKLDSLATIGGSRFAGSTTGDAGEARTRIQFLTIDLGPSNGGVQGFFRVY
                     QGLDPAFVSASLPTTTSTTGSYLELSRNCGDSTGTTEPIFLAANYHDTTGTGVGATTH
                     KHNIANTGTPTSAQKIQRRDAALTPAAGSTVRCYLGGDSILTKPGAGANWLIAANQPD
                     GGAWVQAPGGVQAALAGIPAIATRTDRNYLFPLSRSFNPNFKGVIYVAGKVILDGVIR
                     GRVTVAASGNIIFGDDVTYYQNPATRDCTTGDIAGYFSGQSIIVSNNTLNAPQTLNSN
                     GSLVASPSGTFRSYGGNGTSETIHGFFLTLKTFGAETFNVGSTNAEPCSTGGSSTVGR
                     GCLNTYGGIIQRNRGAVTQTVSGGGSGYAKRYQYDPCGATDPPPYYPTTGVFVKNRYY
                     EMDPTRFSVAGWYTANQN"
     gene            complement(2970..>3417)
                     /locus_tag="VLD58_07660"
     CDS             complement(2970..>3417)
                     /locus_tag="VLD58_07660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54217.1"
                     /translation="EVAFTVTNGLTGTDLRSRSITFMVPLPNLAVKKVTSCGDAPILG
                     TSLNANWVINTSTTPPDTTMVLTWSRAVDDAGGESDVRAYIIWRRLTGASTWPDPIAT
                     VAAGPTSPSFADEAVHPGTSYQYALAAQDCTPSLSAMVSVTAPLTP"
BASE COUNT          512 a         1018 c         1278 g          609 t
ORIGIN      
        1 ctgctggacc ggcgcacggt ggtctccacc atcgagcgct atccgctggg catgaccttc
       61 ttctccactc ccgagaagat cgaaatcggc ggggtgccct tcatcgcgag cggcgagaaa
      121 ccgactcggc gcgatgggct gctctattac cggcgggtgg cggaagcgtt ccggctggac
      181 gcccgccctg gcgaagaggt cacctcggtg gtacgccagg gtgaccggtt ccgggtggag
      241 gtccggcggc ggcacgacac caccgcgtat gatgccggcg ccgtggtgtt cgccacaggc
      301 tactacgact ggcccaatcc gctcaacgtc ccgggggaag agttgcccca cgtggcgcac
      361 tacttcaccg agggccatcg ccactggcac caggacgtgg tggtcatcgg ggcggggaac
      421 agtgcggtcg acgcggcgct cgagtgctgg cgggccggtt cccgagtggc gctggtgcac
      481 ttcggcgagg ggttcgacaa ggtggtgaag ccgtgggtgc tgccggatat caccaaccgg
      541 gtgaaggaag ggagtatcaa ggcgtggtgg cgacaccggg tcacccggat caccccggcc
      601 accgtcgagc tcgagccggt gtcaggtgga aaggcggtat cgattccggc cgatgcggtg
      661 ctcgcgatga ccggctatca cgccgatacc acgctgctgg agcagctggg ggtcccggtg
      721 gatcgcgcga gcggaatccc cgcgcatgac gaagcgacca tgatgacggc cgtgcccggg
      781 gcttacctgg ccggggtgat cgccagcggc aaggatgcca accggctctt catcgagaac
      841 gcccgggggc acggggagct gatcgtgcgg gatgtgctgc gccggcggta aggccaaggc
      901 ggccaagcgg ctaggcggca aagcggtcag tcagaacact gaagggtgag ttcctcttgg
      961 aacccaccct tcgggttttt ccggccgcct tgccgcttgc ccgccttgcc gcttggccgc
     1021 ctagttctga ttcgccgtgt accagccggc cacgctgaag cgggtcgggt ccatctcgta
     1081 gtagcggttc ttcacgaaca cgccggtggt cggatagtac ggcggcgggt cagtggcccc
     1141 gcagggatcg tactggtagc gcttggcata gccgctgccg ccgccgctca cggtctgggt
     1201 tacggcaccg cggttcctct ggatgatgcc gccataggta ttgaggcagc cgcggcccac
     1261 cgtgctggag ccgccggtcg agcagggctc ggcgttggta ctgccgacgt tgaatgtctc
     1321 ggcgccgaag gtcttgaggg tcaggaagaa cccgtggatc gtctcggagg tgccattgcc
     1381 gccgtaggag cggaaggtgc cggaagggct cgccaccagg gacccgttgg agttgagcgt
     1441 ctggggcgcg ttcagggtgt tgttcgagac gatgatcgac tggcccgaga agtaaccggc
     1501 gatgtcgccg gtggtgcagt cgcgggtggc cgggttctga tagtaggtga cgtcgtcccc
     1561 gaagatgatg ttgccgcttg ccgccaccgt gacgcggccg cggatgacgc catcgaggat
     1621 caccttgccg gcgacgtaga taaccccttt gaagttcggg ttgaagctcc ggctcagcgg
     1681 gaacagatag ttccggtcgg tccgcgtcgc gatcgccggg atgccggcga gggcggcctg
     1741 cacgccgccg ggcgcctgga cccaggcgcc accatcgggc tggttggccg cgatcagcca
     1801 attggcgccg gccccaggct tggtgaggat ggagtcgccg ccgaggtagc agcgcacggt
     1861 cgacccggct gcgggcgtca aggccgcatc ccgtcgctgg atcttctggg cgctggtcgg
     1921 cgtaccggta ttggcgatgt tgtgtttgtg tgtggtcgcg cccacgccgg tgccggtggt
     1981 gtcgtggtag ttggctgcca ggaagatcgg ctcggtcgtc cccgtgctat ccccgcagtt
     2041 gcgggagagc tcgagatagc ttccagtggt gctggtggtg gtcgggaggc tggccgagac
     2101 gaaggccgga tccagaccct gatacacccg gaagaagccc tggacgccgc cgttggacgg
     2161 gcccaggtcg atcgtcagga actggatccg ggtccgggcc tcaccagcgt cgccggtcgt
     2221 ggagccggcg aagcggctgc cgccgatggt cgccaggctg tcgagcttgt tgaggtccgt
     2281 gaccgtcggc atcgggatcc gcgagacgcc gagcttgggc ggcttggtga aggtgccgtt
     2341 gctctgcccg atcatggtgc tccgggccga ggtcacctca tcatagaagg tggcgccgct
     2401 gctggcgatc cggatggtgt cgttggtatg gaccgggccg cgcacctggt cgttgttgag
     2461 gaaagacagc accgtcccgg cggtgtcctc ttcgatgtcg gtgaagtagg agaacttgga
     2521 gaagctctcc tggttgatct ccagccggcg gagcaccttg ttgccgtaga tgtccctggc
     2581 ctgcgcgatg atgctgccca cgatgccgta ctgaccggtg gtgatgccac tggggcccac
     2641 ccagatcgag cgggtgatgt tggggatcac cgcgttgctg gcgttcttga ccgtggcatt
     2701 gctctcgagc gtggtatacc cggagttggg gtagagcgcc cggttcccgt tgatggcgct
     2761 ccgcgcctcc tcgaggccgg cgagggcggc ggcgtcgacc gactgggccc gctcggcgtt
     2821 cttgccgatg aggttggcgt tcagcgtcat catcaccgcc gcgatggcga tggcgctgac
     2881 ggcgaaggtc accagcaggg tggtgatcag cgcaatgccg cgccggtcgc gcagaagacg
     2941 ggtagacatg gtatggctcc gatgccgaat catggcgtga gcggtgccgt caccgacacc
     3001 atggccgaga gcgaaggggt gcagtcctgg gccgcgagcg cgtactggta gctggtgccg
     3061 ggatggaccg cctcgtccgc gaacgacggg gaggtcgggc cggcggccac ggtggcgatc
     3121 gggtcgggcc acgtcgaggc gccggtcagg cgccgccaga tgatgtaggc ccgcacgtcg
     3181 ctctcgccgc ccgcatcgtc caccgcccgg ctccaggtga ggaccatggt ggtgtccggc
     3241 ggagtggtgc tggtgttgat gacccagttg gcgttgagcg aggtgcccag gatcggggcg
     3301 tcgccgcagc tggtcacctt cttcactgcg aggttgggca gcggcaccat gaaggtgatg
     3361 gagcgggacc ggagatcggt gccggtcagg ccgttggtga cggtgaaggc gacctcg
//
LOCUS       DATIFF010000514         2325 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2219876, whole genome shotgun sequence.
ACCESSION   DATIFF010000514 DATIFF010000000
VERSION     DATIFF010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2325
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2219876"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(171..566)
                     /locus_tag="VLD58_07665"
     CDS             complement(171..566)
                     /locus_tag="VLD58_07665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54218.1"
                     /translation="MTQPPLPLPPQMPTSLADLTRYGDELVTAYLTARDHWAGLVDRE
                     SVLEAGRAEAKAAAIARLMAQTNPLTKNQHSATSAAAVCETDPTYAAYLAEQRDVVMN
                     QNVAWTRAEATRLRVLLCVALIGRQEPER"
     gene            complement(815..1342)
                     /locus_tag="VLD58_07670"
     CDS             complement(815..1342)
                     /locus_tag="VLD58_07670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54219.1"
                     /translation="MRLRNSTDLPDDLIRQVVAFVRPPGISRFTVRVQNHHRSHFSGC
                     AGGGLVTVRLGSRPRTVELWPKRRRALAAAKGHPYEPRFAQRGVTWPMVPGDLRQRRR
                     KSSRGGYLPLPALADRTEALVYVMAHELRHLWQARIPRGRRVWGARGQFSERDADAYA
                     LRQLRRWRREGPPRS"
     gene            complement(1339..1548)
                     /locus_tag="VLD58_07675"
     CDS             complement(1339..1548)
                     /locus_tag="VLD58_07675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54220.1"
                     /translation="MTHGANQRDVARRLRELGAVGTVARRTGEVIWHHPRIPYRVRVN
                     LRRKDAPRAMTSFLRAVERAQGGHK"
     gene            complement(1545..1802)
                     /locus_tag="VLD58_07680"
     CDS             complement(1545..1802)
                     /locus_tag="VLD58_07680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54221.1"
                     /translation="MQKTVSTRRCRIAGQVCVVEEATAPKGTFVGGFTRLWTVDRQLP
                     DLDFPGMGRCSQWERVTWSGVSEADAVAKAKAVLTGKGKAG"
     gene            complement(1818..2051)
                     /locus_tag="VLD58_07685"
     CDS             complement(1818..2051)
                     /locus_tag="VLD58_07685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54222.1"
                     /translation="MTVAQLTPGRRFALAALPNRIGEVLWIGDGGVGVWYEGTRRKRI
                     TVKSGDTVVRVAEFEVPSSKPVIISRATEVVAL"
BASE COUNT          339 a          787 c          815 g          384 t
ORIGIN      
        1 cgccggatac tggagatagt gcccgagggc ggcctcgact accaggatgt gctctggtac
       61 gcggtcgttc gcatcccctc taggatggcc cccgccagtc caacaagaga cgtagccatt
      121 cggtcggaga ctccgtcccc cttgccaacg tccgtgggcg gggccgggcc tcatcgctcg
      181 ggttcctgcc gaccgatcaa cgcgacgcag agcaacacgc ggagccgagt ggcttccgcc
      241 cgtgtccacg cgacgttctg attcatcacg acatcccgct gctccgccag gtaggcggcg
      301 taagtgggat cggtctcgca gacggcggcg gcggacgtgg cgctgtgctg gttcttcgtg
      361 agcgggttgg tctgcgccat cagtcgcgcg atggctgcgg ccttggcctc cgcccgcccg
      421 gcttcgagga cgctctcccg gtccaccagg cccgcccagt gatcgcgggc ggtcaggtag
      481 gcggtgacga gttcatcccc atagcgggtg aggtcggcga ggctcgtcgg catctgcggc
      541 gggagcggga gcggcggttg ggtcatggcg caccgtgcga accggggtca acagcaccca
      601 gcccggagcc cggcctccgt gctcggcgag gaacgccggt cgcgccgcca ccacggcccg
      661 gagatgggcg gtgtggatgc ggctccggca gaggatcaac ccgcgccgtg gcgagcggac
      721 cggcaggatc gtgagtagct ccagtgcgtc ggtcatagcc gggcggcgta ggtgtgaggg
      781 gagaaagata gcgcccccgt gatggggcgc aaggtcacga ccggggcggc ccctcccgcc
      841 gccagcgccg gagttggcgg agcgcgtagg catcggcgtc ccgctcgctg aactgcccgc
      901 gcgcccccca gacccggcgg cctcggggga tgcgcgcttg ccagaggtgg cggagttcgt
      961 gggccatgac gtagaccagc gcctcggtcc ggtcggccaa ggcggggagc ggcaggtagc
     1021 cgccccggct gctcttgcgc cgccgctgcc ggaggtcgcc aggcaccatc ggccacgtca
     1081 ccccgcgctg ggcaaagcgg ggctcgtagg ggtggccctt cgcggcggcc agcgcccggc
     1141 ggcgcttcgg ccatagctcg accgtgcggg gacggctccc cagccggacc gtcaccaggc
     1201 cgcccccggc gcatccgctg aagtgggagc ggtgatgatt ctgcacccgg acggtgaagc
     1261 ggctgatgcc gggcgggcgg acgaaggcga cgacctgccg gatcaggtcg tcgggtaggt
     1321 cggtggaatt gcggagtctc acttgtggcc tccctgggcg cgctcgaccg cccggagaaa
     1381 tgaggtcatg gcgcgcggcg cgtccttccg ccgcaggttg acccgcaccc ggtaggggat
     1441 gcggggatgg tgccagatga cttcgccggt ccggcgggcg acggtgccga cggccccgag
     1501 ttcacggagc cgccgggcca cgtcgcgctg gttcgcgccg tgggtcatcc cgccttcccc
     1561 tttccggtga gcactgcctt cgccttcgcc accgcatcgg cctcgctcac gccgctccag
     1621 gtcacccgct cccactggga gcaccggccc atccctggga agtcgaggtc ggggagttgg
     1681 cggtccaccg tccagagccg ggtgaacccg ccgacgaacg tccccttcgg cgcggtggcc
     1741 tcctcgacca cgcacacctg cccggcaatc cggcagcgcc gggtgctgac tgtcttctgc
     1801 atcctgcctc cgtcgagtta gagggcgacg acttccgtcg cccggctgat gatgactggc
     1861 ttcgaggatg gtacctcgaa ctccgcgacc cgcaccacgg tgtccccgga cttcacggtg
     1921 atccgtttcc ggcgggtgcc ttcgtaccag acgccgaccc cgccgtcccc gatccacagc
     1981 acttcgccga tgcgattcgg caaggccgcc agcgcgaagc gccgaccggg ggtgagttgt
     2041 gcgaccgtca cgttgcctcc attctaagag gtgtgtcgcg gcaatgatag tgccgatgtg
     2101 ctctatcacc gacaccttaa atatagcaat cgtgtttttg cgattcggtg gatgtcggcg
     2161 gttttggtgg gttaagtcgt tgtgcgatgg tccgaaaact ggggggttga cacgggtttt
     2221 atgattgacg gatgaacacc taccgccgga tttacgaagc acactacggt cccattccgc
     2281 gtggcttcca tgtccatcac cgtaacggca accacgacga caacc
//
LOCUS       DATIFF010000515         1346 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1144671, whole genome shotgun sequence.
ACCESSION   DATIFF010000515 DATIFF010000000
VERSION     DATIFF010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1346
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1144671"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            260..805
                     /locus_tag="VLD58_07690"
     CDS             260..805
                     /locus_tag="VLD58_07690"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSB54223.1"
                     /translation="MPRIAPIDPASATGEVAAQLAVSRKLFGGTPNLVTTAANSPAAV
                     GAMLSLFSQLGKSSLGPRAGEQIAIAIAQNNGCGYCLSAHSAVGALHGLKPAELASAR
                     HAKASEPRTEALLTLAVAINQTRGHIDDATLAAARAAGLTDAEVVEVVAHVALNVFTN
                     YLNSVAETAIDFPEVSLTAAA"
     gene            817..1227
                     /locus_tag="VLD58_07695"
     CDS             817..1227
                     /locus_tag="VLD58_07695"
                     /inference="COORDINATES: protein motif:HMM:NF018748.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSB54224.1"
                     /translation="MTGAIRPPFTLESALAKVQAAEDAWNSRDPDRVVLAYTEDSDWR
                     NRTEFFRGREAIRAFLVRKWARELDYRLRKELWGFRDNRIAVRFEYEWHDTEGQWYRS
                     YGNELWEFDPRGLMSRRYASINDAPIAEAERRIG"
BASE COUNT          218 a          457 c          464 g          207 t
ORIGIN      
        1 gattctcgaa gtccgtggcg cggacccggg cggaggacgc ggtcatgcgg ctcgagggcg
       61 ccctggtgct ggcgggcggg atggacgatc cctcgctgtt cgggcgggcc ctgaaacagc
      121 ttccggcgga actgctggcc ccggtcgcgc ggcggcggtg aggaggccag ggtggggagc
      181 cgggaacctt ttcgagggtg gctgcattgt accgagcgtt cggtacattg cggcactcaa
      241 cctctgaaag gagtctccca tgcctcgtat tgctcccatc gaccccgcca gcgccaccgg
      301 cgaagtggcg gcccagctcg ccgtctcccg caagctcttc ggcggcaccc ccaacctggt
      361 gaccaccgcg gccaattctc ccgctgccgt gggcgcgatg ctgtccctct tcagtcagct
      421 cgggaagtcc tcgctcggcc ccagggcggg ggagcagatc gcgatcgcca tcgcccagaa
      481 caacggctgc ggctactgcc tctcggccca cagtgccgtc ggcgcgctgc acgggctcaa
      541 gcctgcggaa ctggcctctg cccggcatgc caaagcgtcc gagcccagga cggaggcgct
      601 gctcacgctt gcggtggcca tcaaccagac ccgcgggcac atcgacgacg caaccctggc
      661 cgcggcccgg gctgccgggc tcaccgatgc cgaggtggtg gaggtggtgg cccacgtcgc
      721 gctcaacgtg ttcaccaact acctcaacag cgtggcggag accgcgatcg attttcccga
      781 agtctccctc accgccgccg cctgaccgga gggcacatga ctggcgccat ccgaccgccg
      841 ttcaccctgg agtccgccct ggccaaggtg caggccgccg aagatgcatg gaacagccgg
      901 gatcccgatc gggtggtgct ggcctacacc gaggattccg actggcgcaa ccggaccgag
      961 ttcttccggg gccgggaggc gatccgcgcc ttcctggtgc ggaagtgggc cagggagctc
     1021 gactaccggc tcaggaaaga gctctggggc ttccgggata accggatcgc cgtgcggttc
     1081 gagtacgaat ggcacgacac cgaggggcag tggtaccgct cctacggtaa cgagctctgg
     1141 gaattcgacc cgcggggtct catgtcacgg cgctatgcca gtatcaacga cgcgccgatt
     1201 gccgaggcgg aacgacggat cggctgaccg tcacgaggcg catcggacaa cggctcacgc
     1261 ggccggtgtc cgatagcgcc ggccgaggat cgggatccag ccgagcagct tgttgcggag
     1321 gcgtatcggg tggctccgca ccacga
//
LOCUS       DATIFF010000516         1586 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_681831, whole genome shotgun sequence.
ACCESSION   DATIFF010000516 DATIFF010000000
VERSION     DATIFF010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1586
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_681831"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1485
                     /locus_tag="VLD58_07700"
     CDS             <1..1485
                     /locus_tag="VLD58_07700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54225.1"
                     /translation="AHRRLDEIIASCLDDRGATSFLDFETALLGLLRSLGCLLIQLFL
                     RARHERLALTPWTQGRGYRVADPAAERTLKTSCGPVAYVRALLVPRPGGGPGVHPLDV
                     ALGLTRDAFSPLVIGWFCRLATRMSFRVASELGEMFLGAAPPASAIEEWVLGLARSAY
                     VYLSDGPLPENDGEVLVIEIDGKAAPTATDQELARRRGPRSRHERGCDCGCQRHRGRA
                     RRRRRGRRTRRKKGDKSKNGRSVTLVVMYTLRRGEDGRLHGPLNKKVYGTFGSRKSAL
                     AWARAQATRRGFPPGTDKTVQLIVDGETCLGQRLRRLFRGATLTLDIRHAQEKLWEVG
                     RLFHREGSPELSRWVEDLEELLYKGHVRALLGRLEQEARGVSLRGPGTKEKREVLKQV
                     IGYLEARVKLMDYGRLREEDLVIATGVVEGAARYVVGERLDNSGMRWIEGRAEAVLLL
                     RCIEVNGDWEAFTRWGQERRNQELERGQVVQIRSKTPTQLPEAA"
BASE COUNT          254 a          492 c          623 g          217 t
ORIGIN      
        1 gcccaccggc ggctcgacga gatcatcgcc tcctgtctgg acgaccgagg cgcgacctct
       61 ttcctcgact tcgagacggc gctgctgggg ctcctgcggt cgctgggatg cttgctgatc
      121 caactgttcc tccgggcgcg ccatgagcga ctggccctga cgccttggac acagggccgc
      181 ggctatcgcg tggctgaccc cgccgccgag cggacgctca agaccagctg tggtccggtc
      241 gcctatgtcc gggccctcct cgtgccgcgg cccggcggcg ggcccggcgt gcaccccctg
      301 gacgtggcgc tgggactgac gcgcgacgcc ttcagcccgc tggtcatcgg ctggttctgt
      361 cggctggcca cccggatgag cttccgggtc gccagtgaac tcggggagat gttcctgggg
      421 gccgcgccgc cggcctcagc gatcgaggag tgggtgctgg gcctggcccg gtccgcctac
      481 gtctatctca gtgacggccc tttgcccgag aacgacggcg aggtgctggt catcgagatc
      541 gacggcaagg cggcgcccac ggccacggac caagagctgg cgcggcggcg cggcccgcgg
      601 tcgcggcacg agcgcggctg tgactgcggg tgccagcgcc atcggggccg ggcgcggcgg
      661 cgacgccggg ggcgccggac gaggcgaaag aagggggaca agagcaagaa cggccggagc
      721 gtcacgctgg tggtgatgta cacgcttcgg cggggcgagg acgggcggct gcacggcccg
      781 ctcaacaaga aggtgtacgg gaccttcgga tcacggaagt cggcgctggc gtgggcgcgg
      841 gcgcaggcga cgcgccgcgg gttccccccc gggaccgaca agacggtgca actcatcgtc
      901 gacggcgaga cgtgcctggg acagcggctg cggcggctgt tccgcggcgc gaccctgacg
      961 ctggacatcc ggcacgcgca ggagaagctc tgggaggtgg gccggctgtt ccaccgggag
     1021 gggagcccgg agctgtcgcg ctgggtcgag gacctggaag agctgctcta caaggggcat
     1081 gtgcgcgcgc tgctcggacg cctggagcag gaggcccgcg gggtgagcct ccgtggcccc
     1141 gggacgaagg agaaacggga ggtgctgaag caggtcatcg gctacctgga ggcgcgggtg
     1201 aagctgatgg actacggccg gctgagggag gaggacctgg tgatcgccac gggtgtggtg
     1261 gagggtgcgg cgcggtacgt ggtgggtgag cggctggaca acagcgggat gaggtggatc
     1321 gaggggcgtg cggaggcggt gttactgctg cggtgcatcg aggtcaacgg cgactgggag
     1381 gccttcacga ggtggggcca agagcgacgc aaccaagagc ttgagcgcgg ccaggtcgtt
     1441 cagatccgga gcaagacgcc cacccaacta cccgaagcag catgaacatg ccaggcgcgc
     1501 agccaaacgg tctgcaccct tgagaaatcg acaccagcct cctcgagtcg gcggtgaagc
     1561 agccgttgaa ccaacaaggc cagggc
//
LOCUS       DATIFF010000517         5833 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1297979, whole genome shotgun sequence.
ACCESSION   DATIFF010000517 DATIFF010000000
VERSION     DATIFF010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5833
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1297979"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..694
                     /gene="queC"
                     /locus_tag="VLD58_07705"
     CDS             <1..694
                     /gene="queC"
                     /locus_tag="VLD58_07705"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HSB54226.1"
                     /translation="GLDSATTLALATRDGFQAHALSFRYGQRHAIELEAAQKVARQLG
                     AVRHVIIDIDLRSFGGSALTADIPVPKGRSTEEMTREIPVTYVPARNTIFLSYALAFA
                     EVLKAVDIYIGVNALDYSGYPDCRPEYIAAFEHLANLATKAGVEGQARLHIRTPLIQL
                     TKREIIATGLELGVDFSLTRSCYDPAPDGAACGDCDSCLLRLKGFAENGVVDPAPYAV
                     KGRGSWVKETRP"
     gene            727..1365
                     /gene="queE"
                     /locus_tag="VLD58_07710"
     CDS             727..1365
                     /gene="queE"
                     /locus_tag="VLD58_07710"
                     /EC_number="4.3.99.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase"
                     /protein_id="HSB54227.1"
                     /translation="MYSVKELFYTLQGEGANAGRPAVFLRFAGCNLWSGREADRAAAV
                     CRFCDTEFVGTDGPGGGKFATPEALAAAVAKAWPAGPGPKARPLVVCTGGEPLLQLDP
                     AAIAALHGEGFEVAVETNGTIAAPAGLDWICVSPKAEAELIQRSGNELKLVFPQAGAE
                     PERFRSLDFQHFFLQPMDGPDQRANTERAVRYCLEHPEWRLSLQTHKMLGIP"
     gene            1392..2009
                     /locus_tag="VLD58_07715"
     CDS             1392..2009
                     /locus_tag="VLD58_07715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54228.1"
                     /translation="MTHSPGFSDRIAHALSYAAKHGATPSPRGGSITWPTRPANVAVI
                     LARHGCDELTIVSGILLALLSEVEHSRQHELAGRIGSKFGEPVLNVVKQVLEPRYDNR
                     GRERGWEACKLDYLANLGLCDQRALEVSAANEIHQCGALITDVRRLGSEYLSSYAPGG
                     GPTVVYWFTQVVQAYEGHATGPRTAMLVELRALAARLADLVLTEE"
     gene            2143..3483
                     /locus_tag="VLD58_07720"
     CDS             2143..3483
                     /locus_tag="VLD58_07720"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HSB54229.1"
                     /translation="MESSTSLLASLPNAFAMACRHARSDSELFERCREALTRRFNSDR
                     IWFSITSPSTLVSLLPPPEWLSQAVEVVRLGSGQTDVAIMADPAVASQMRGHATPIAL
                     GLSVMLELHSVLRERQGQLDDAVFQLRALRQVARLLSSVHSTGETENLVLDFMAEVFF
                     CWWACLYRPSGSEYMPKVVRSLRGSMTLDSVSRDALDRALPHDSPVATTDDAQIARLL
                     PPTAQLVVSLDAGAERLAVLTLGPRLHDQEFGQAESELAGTLAYAAAIALKNAQLVEQ
                     LQSAASTDPLTGLSNRRAMEDRLAAELSRTHRHQIKTSVVMIDVDRFKLVNDTQGHAV
                     GDRLLAEISRILRQQCRSLDAVGRMGGDEFLVILPMTSAEETMSFVDRVQKAVGRLEQ
                     QFPEFGRPSLSMGIAEAPRHGKGPEQLMGAADAALYRAKRGGRDAVEKAEDGQP"
     gene            3480..4040
                     /locus_tag="VLD58_07725"
     CDS             3480..4040
                     /locus_tag="VLD58_07725"
                     /inference="COORDINATES: protein motif:HMM:NF018984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABATE domain-containing protein"
                     /protein_id="HSB54230.1"
                     /translation="MSDSEFLLLGDALWLELVNTLAGPNRADALPDAPAWLRFTKALR
                     LEPPENAAVLQEALGFRERLARLAQALEGHRNPPGAAVDAINERLSALQGREHLVRVG
                     GAWQIRFAPGRPPAALEAIARSAAETLANPVAMIRTCANPACALFLLDDTHNQSRRWC
                     SPARCGKLGRTERRRRSRLTPIVNEA"
     gene            4045..5799
                     /locus_tag="VLD58_07730"
     CDS             4045..5799
                     /locus_tag="VLD58_07730"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB54231.1"
                     /translation="MSTPPPLTIFERVESALGQRFRLETMVAASRERVLFTAQDKLLS
                     RRVSLRVNLYPNDQTRSWFLREAEALAQLDHPAIRHVYDAGIVGDLAYRVGNWNDGES
                     LQEAVQRGPRPFPTVHILARDMLSGLEHAHAHGIIVRRIAPTSLLVNLAGRGTVTDLR
                     YCNWTLPAIPPTEIPGAQAYMAPEIRGGAAGDPTSDIYTAGAILYVAVTGVEPPLDSA
                     QLKPPSALRPNCPRAIERILLRSLRPAPDDRYLTAAEMLEDFASDAGTYESPAVLQMS
                     PRILPSESDDGRHWEKRLRRALGDDYELLSLLGSGGYGRVYRVRDLHLEREVALKVLH
                     PHLTADPAVVERFRREAQLAARLNHPNLVNIYDIGGRSGLLWYTMELVKGPNLAQLVE
                     KEGPLPLEKVVRLLRESLSALAQAHAAGLVHRDLKPENMLLEPDGSLRITDFGLALAL
                     RAPGRFGGATSQSGTPMFASPEQLLGERVDQRSDLYSLAAVAYFALLGEPPFTGATVE
                     QVLTRQTTNQWPELRNRRGDISEDLASVLERALHAEVEQRYPSAAEFLLALNRATGKG
                     LRRKSGEWTKAALRWWKP"
BASE COUNT          908 a         2103 c         1915 g          907 t
ORIGIN      
        1 cggcctcgac tccgccacca ccctggcgct cgccacccga gacggcttcc aggcccacgc
       61 cctctcgttc cgctacggcc agcgccacgc catcgaactc gaagccgccc agaaggtcgc
      121 ccggcagctc ggcgccgtcc gacacgtcat catcgacatc gacctccggt cattcggggg
      181 ctcggccctc accgcggaca tcccggtgcc caagggccgg agcaccgagg agatgacccg
      241 cgagattccg gtcacctatg tcccggcccg caacaccatc ttcctgtcgt atgcactcgc
      301 ctttgccgaa gtgctcaagg ccgttgacat ctacatcgga gtgaacgcgc tggactacag
      361 cggctatccc gactgccggc ccgaatacat cgccgctttc gagcacctgg ccaacctcgc
      421 caccaaggcc ggtgtggaag gacaggcacg gctgcacatc cgcacgccgc tcatccagct
      481 caccaagcgc gagatcatcg cgaccggcct cgagctgggc gtggacttct cgctcacccg
      541 gagctgttac gatccggctc cggacggcgc cgcctgcggc gactgcgact cctgcctgct
      601 gcggttgaaa ggattcgccg agaacggggt ggttgatccg gcgccctatg cggtcaaggg
      661 tcgcgggtca tgggtcaagg agactcgccc ttgacccatg tcgcttgacc cttgaccctt
      721 gacccaatgt actcagtcaa agagctcttc tatacgctac agggcgaagg cgccaacgcc
      781 ggccggcccg cggtgtttct gcgcttcgcc gggtgcaatc tctggtcggg gcgcgaggcc
      841 gatcgggccg cggcggtttg ccgcttctgc gataccgagt tcgtgggcac tgacggcccg
      901 ggcggcggga agttcgccac gccggaagcg ctcgcggcgg cggtggcgaa ggcctggccg
      961 gctggccccg gccccaaggc ccggcctctc gtggtctgca ccggtggcga gccgctcctg
     1021 cagctcgacc ccgccgccat cgctgcgctc cacggggagg gcttcgaagt cgcggtggaa
     1081 accaacggca ccatcgccgc ccccgccgga ctcgactgga tctgtgtgag ccccaaggcc
     1141 gaagccgagc tgatccagcg ctcggggaat gagctcaagc tcgtcttccc gcaggccggg
     1201 gccgagcccg agcggttccg ttcactcgac ttccagcatt tctttctcca gccgatggac
     1261 ggccctgacc agcgcgccaa taccgaacgg gcggtgcggt attgtctcga gcacccagag
     1321 tggcggctga gtcttcagac gcataagatg cttggcattc cgtaggaccg gttcactctc
     1381 acaataccgg catgacccat tctcccggct tctccgaccg cattgcccac gcgctgagct
     1441 atgcggccaa gcacggagcg acaccgtctc cccgcggcgg tagcatcacc tggcccaccc
     1501 gcccggcgaa cgtcgccgtg atcctggctc gccatggctg cgacgagctc acgatcgtgt
     1561 cggggatcct gctggcgctg ctctccgaag tggagcacag ccggcagcac gagctggcgg
     1621 ggcggatcgg cagcaagttc ggagagccgg tgctcaacgt ggtgaagcag gtgctggaac
     1681 cgcgctatga caaccggggg cgggagcgtg ggtgggaagc ctgcaagctc gactacctcg
     1741 ccaatctcgg cctctgcgac cagcgggcac tcgaggtctc ggcggcgaac gaaatccatc
     1801 aatgcggcgc gctcatcacc gacgtgcgcc gcctcggcag tgagtatctc tccagctacg
     1861 ctccgggcgg cgggccgacc gtcgtctact ggttcaccca ggtggtgcag gcctacgagg
     1921 gccacgccac cgggccccga acggccatgc tggtcgaact ccgcgccctg gccgcgcgtc
     1981 tcgccgatct ggtgctgacc gaggaataac ctcgcagggc cggcagcacc aacttcctgc
     2041 ccatactcgc ctctctgcag ggtgcgcgag accgaactac cctcagcatc gcccggcagg
     2101 gaggtgcttg agcaggcgtg tatcactata ttcttcaatg agatggagtc atccacctcg
     2161 cttctcgcct ccctgccgaa cgccttcgcc atggcgtgcc gccacgctcg cagcgacagc
     2221 gagctcttcg agcggtgccg tgaggcgttg acccgccgct tcaacagcga ccggatctgg
     2281 ttcagcatca ccagtcccag cacgctcgtc agcctgcttc ccccgccgga gtggctcagc
     2341 caggcggtcg aggtggtccg tctcgggagc ggccagaccg acgtggccat catggccgac
     2401 ccagctgtgg ccagccagat gcggggccac gccacaccga tcgcgctcgg gctctcggtg
     2461 atgctggaac tgcacagcgt gctgcgtgaa cgccagggcc agctggatga cgccgtcttc
     2521 cagcttcgcg ccctgcggca ggtcgcccgg ctcctctcct cggtgcattc caccggcgaa
     2581 accgagaatc tggtcctcga cttcatggcc gaggtcttct tctgctggtg ggcgtgcctc
     2641 taccggcctt ccgggtcgga gtacatgccc aaggtggtcc gctccctccg cggctcgatg
     2701 accctcgact cggtgtcccg cgacgcgctc gaccgggcgc tgccgcacga cagcccggtg
     2761 gcgactaccg acgatgcgca gattgcccgg cttctcccgc ctacggccca gctggtggtc
     2821 tcgcttgacg ccggcgccga acggctggcg gtgctgacgc tgggcccccg gctccacgac
     2881 caggagttcg ggcaggccga atcggagctg gcaggcaccc tggcgtacgc ggccgcgatc
     2941 gcgctcaaga acgcccagct ggtggagcag ctccagagcg cggcgagtac cgaccccctg
     3001 accggcctca gcaatcgccg cgcaatggag gaccgtctcg ccgccgagct gtcccgcacc
     3061 caccggcacc agatcaagac cagtgtcgtg atgatcgacg tcgaccgctt caagctggtg
     3121 aacgacaccc aggggcatgc cgtgggtgac cggctgctgg ccgagatttc ccggatcctc
     3181 cggcagcagt gccgttcgct cgatgcggtg ggccggatgg gtggcgacga gttcctcgtg
     3241 atcctcccca tgacttcggc ggaagagacc atgagctttg tcgaccgggt gcagaaagcg
     3301 gtggggcgcc tggagcagca gttccccgag ttcgggcgcc cctcgctgag catgggcatc
     3361 gcggaggcgc cacggcacgg caaggggccc gagcagctga tgggcgcggc cgatgccgcg
     3421 ctctatcgcg ccaagcgggg cggccgcgat gcggtggaga aggcggagga cggccagcca
     3481 tgagcgacag cgagttcctg ctgctgggcg atgcgctctg gctcgagttg gtgaacacac
     3541 tcgccgggcc taaccgcgcc gatgccctgc ccgacgcccc ggcgtggctc cgcttcacca
     3601 aggcgctccg cctcgagcca ccggagaacg ccgccgtcct ccaggaagcg ctcggcttcc
     3661 gggagaggct cgcccggctg gcgcaggcgc tcgaaggaca tcgcaacccg ccgggtgcgg
     3721 cggtggacgc catcaacgag cggctgtcgg cgctccaggg acgggaacac ctggtgcggg
     3781 tgggtggcgc ctggcagatc cggttcgcgc cggggcggcc gccggcggcc ctcgaggcca
     3841 tcgcccgctc cgccgccgaa accctggcaa acccggtggc gatgatccgc acctgcgcca
     3901 accccgcttg cgcgctcttc ctgctggacg acactcacaa tcagagccgc cgctggtgca
     3961 gcccggcacg ctgcggaaag ctgggacgga cggagcgccg ccggcggtcc cgtctcaccc
     4021 ccattgtcaa cgaagcctga gccgatgagc acgcctccgc cgctcaccat cttcgagcgg
     4081 gtcgagtccg ccctgggaca gcgcttccgg ctggagacca tggtggccgc gtcccgcgag
     4141 cgggtgctct tcaccgcgca ggacaaactc ctgtcccggc gggtttcgct ccgcgtcaat
     4201 ctctacccca acgaccagac ccggtcctgg ttcctccgcg aggcggaggc gctggcgcag
     4261 ctcgatcatc ccgcgatccg gcacgtctac gacgccggca tcgtgggcga cctcgcctac
     4321 cgggtgggca actggaacga cggcgagagt cttcaggagg cggtacagcg cggacctcgg
     4381 cccttcccca ccgtccacat cctcgcgcgc gacatgctga gcggcctcga gcatgcccac
     4441 gcccacggca tcatcgtgcg gcggatcgcg ccgacctcgc tgctggtgaa cctcgccggc
     4501 cgcggcaccg tcaccgatct ccgttactgc aactggaccc tcccggcgat tccaccgacc
     4561 gagattcccg gcgcccaggc ctacatggcg ccggagatcc gcggcggggc ggcgggcgat
     4621 cccaccagcg acatctacac cgccggcgcg attctctatg tcgccgtgac cggggtggag
     4681 ccgccgctcg acagcgccca gctcaagccg ccctcggcgc tccggcccaa ctgtccccgc
     4741 gccatcgagc ggatcctgct ccgctcgctc cgccccgcgc cggacgaccg gtatctcacc
     4801 gcggccgaga tgctggaaga cttcgcctcc gatgccggga catacgagag tccggcggtg
     4861 ctgcagatga gtccccggat cctgccgagc gagagcgacg atgggcgcca ctgggagaag
     4921 cggctccgcc gggcgctggg ggacgactac gagctgctct cgctcctcgg cagcggcggg
     4981 tacgggcggg tctaccgggt gcgggatctc catctcgagc gcgaggtggc gctcaaggtg
     5041 ctgcatcccc atctcaccgc cgatccggcg gtggtggagc ggttccggcg cgaagcccag
     5101 ctggccgcgc gcctcaacca cccgaacctg gtcaacatct acgacatcgg cgggcgctcg
     5161 gggctcctct ggtacaccat ggagctggtg aaaggcccca acctggcgca gctggtggag
     5221 aaggaagggc cgctccccct cgagaaggtg gtgcgcctgc tgcgggagtc gctcagcgcc
     5281 ctggcccagg cccatgccgc cggcctggtg caccgcgacc tcaagcccga gaacatgctg
     5341 ctcgagccgg atgggagcct ccggatcact gacttcggcc tggcgctggc gctccgggcg
     5401 ccggggcggt tcggcggcgc caccagccag agtggcaccc cgatgttcgc cagcccggag
     5461 cagctgctgg gagagcgggt ggaccagcgc tcggacctgt acagtctggc ggcggtggcc
     5521 tatttcgccc tgctgggtga acctcccttc acgggggcca cggtcgaaca ggtcctcacc
     5581 cgccagacca ccaaccagtg gcccgaactc cggaaccggc ggggcgacat atccgaggat
     5641 cttgccagtg ttctggagcg ggcgctccac gccgaggtgg aacagcgcta cccctcggcg
     5701 gcggagttcc tcctggcgct caatcgggcc accgggaagg ggctccggcg caagagcggg
     5761 gagtggacca aggcggcttt acgctggtgg aagccctgac ccccttgacg tattgcctat
     5821 ttgtcacatc ttt
//
LOCUS       DATIFF010000518         4150 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1451692, whole genome shotgun sequence.
ACCESSION   DATIFF010000518 DATIFF010000000
VERSION     DATIFF010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4150
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1451692"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..880
                     /locus_tag="VLD58_07735"
     CDS             <1..880
                     /locus_tag="VLD58_07735"
                     /inference="COORDINATES: protein motif:HMM:NF028476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54232.1"
                     /translation="FAPHAELRGDGATAMELRRLATAYTAAAEADGWDGEWYRRAYYD
                     DGSPLGSAANMECRIDSIAQSWSVISGAGKPERQAQAMRSLEQHLVDEQHRLLLLLTP
                     PFDKTAQDPGYVKGYLPGVRENGAQYTHAALWAVLATALRGDGDRAFELFQMLNPLNH
                     ARTPAEVATYRVEPYVVAADVYTAAGQVGRGGWTWYTGSASWMYRVGLEGILGLDKRG
                     DQLILTPRAPAAWREFAIEYRHGRSRYSITLRNETGAEWGTTAVTVDGVAAPTGAIPF
                     VDDGKRHEVEVRAVAG"
     gene            1112..3772
                     /locus_tag="VLD58_07740"
     CDS             1112..3772
                     /locus_tag="VLD58_07740"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB54233.1"
                     /translation="MPNVPDAFSTLQDALADRYTVERELGQGGMATVYLALDLRHHRK
                     VAIKVLRPELAAVIGADRFLKEIETTASLQHPHILPLLDSGQAVARSGSQTFGGTGEF
                     LYYVMPFVEGENLRDRLAREKQLPVADAVRIATEVAAALGYAHRHGVIHRDIKPENIL
                     LHDGRALVADFGITLAISSAGGTRITETGMSLGTPHYMSPEQAMGEREITARSDIYAL
                     GVVTYEMLVGEPPFTGPTAQAIIAKVMTDEPRPPTGQRKTVPPAVETAVLTALAKLPA
                     DRFGSAAEFAAALTSPVAPRPSRAARPSRLALAAVGLGALVLGAAIGALVAGRRDSAK
                     PSFGTAFKVTYEPSIEVHPALSPDGRFLAYAAGHPIHTRLYVRQVSGGRPTLLTDDST
                     AVEVSPSWSPDGTRILYANQRGLFSVAASGGTPRQEAPARPSGPIIWSQWSPDGATAA
                     YVVADSIFLKPTGAAPRFLATSTSVTGCRWSPDGTRLVCAAGNAYYLTVGALFGNLAP
                     SWIELFDVRSGAGTVLTDRAGINHSPVWSADGRFIYYISDREGPTDIYRIPTSGGRAT
                     PERLTVGLGAQSLSLSADGHRLAYNVYRTVGNVWSLPWGRRPMSLRDAVQVTRGTQSV
                     ENPSVSADGKTLYFDSDLSGTSQIYRIPVGGGEQERLTTDNHQDFSPQVSPDGHTVVF
                     HSTRTGSREVFLLSLDDGTVTQVTDTPDQEEVLPHWSPDGRMLAWGILNGAHGIRLAR
                     RGPDGSFGKPIEKLGWGSTPSFSPDGRWLAFATAPVGVRRLFVMPVDSGAPRSPVDSG
                     GAPPPDVTYPKFSLDGREILFLGWDEATGMPGIWAVPWPGGGKPELVLRFDDPVRAPY
                     RSYWTLSRDRLFVLLQESESDVWVVETGGM"
     gene            3854..>4150
                     /locus_tag="VLD58_07745"
     CDS             3854..>4150
                     /locus_tag="VLD58_07745"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4440 domain-containing protein"
                     /protein_id="HSB54234.1"
                     /translation="MTRRIAVCLVALALALPLPAFAQGGGGDLRAQITKMGQAWQTAY
                     NAGDAAALTALYTTDAKLMAPGAEPVSGSAAIQALFKADMANGAKNFLTTGDVIG"
BASE COUNT          636 a         1501 c         1390 g          623 t
ORIGIN      
        1 cttcgccccg cacgccgaat tgcggggcga tggggcgacc gcgatggagc tccgccggct
       61 ggcgacggcc tacaccgcag cggctgaagc agatggctgg gatggcgagt ggtatcgccg
      121 ggcctactac gacgacggct ccccgctcgg atcggccgcg aacatggagt gccgcatcga
      181 ctccatcgcg cagagctgga gcgtgatctc gggcgcgggg aagccggagc ggcaggccca
      241 ggcgatgcgc tcgctggagc agcacctggt ggacgaacag catcggctgc ttctcctgct
      301 caccccccca ttcgacaaga cggcgcagga ccccggatac gtcaagggct atctccccgg
      361 cgtccgtgag aacggcgcgc aatacaccca cgccgctctc tgggccgtcc tcgccacggc
      421 gctccggggc gacggcgacc gtgccttcga gctgttccag atgctcaacc cgctcaacca
      481 cgcacgtacc cctgccgagg tcgcgaccta cagggtggag ccgtacgtcg tggcggccga
      541 tgtctacacc gcggccggtc aggtcggccg gggcggctgg acctggtaca caggctcggc
      601 aagctggatg tatcgggtgg ggctcgaggg catcctcggg ctcgacaagc ggggcgacca
      661 gctcattctc acaccacggg cgcccgcggc atggcgggaa ttcgcgatcg agtaccgcca
      721 cggccgaagc cgctacagca tcactttgcg gaacgagacc ggagcggagt ggggtacgac
      781 cgcggtgacg gtggatggcg tcgcggcccc gaccggagcc attccgttcg tggatgacgg
      841 gaagcggcac gaggtggagg tgcgggcggt cgcggggtga gccttggttt ggaggaaaag
      901 ggggaaaggg accatgtcct ctctcccccg aggtcatccc gagggcacgg agtgccccag
      961 ggatccctat ggactccgcg ccggcctcaa gggatccctc gcgctgcgcg ctcgggatga
     1021 cgcgggccct tcccttactc cgccaccggg tattgccccg gccctagccg ctcggtccac
     1081 cgcagggcat cttcgagcac ccccctgacc gatgcccaac gtgcccgacg ccttctccac
     1141 gcttcaggat gccctcgccg accgctacac ggtggagcgc gagctcggcc agggcggcat
     1201 ggctaccgtg tacctcgccc tggacctgcg ccaccaccgc aaggtggcca tcaaggttct
     1261 ccgccctgag ctggccgccg tcatcggcgc ggatcgtttt ctcaaggaga tcgagacaac
     1321 cgcgagcctg cagcacccgc acatcctgcc gctgctggac agtggccagg cggtcgcccg
     1381 atcgggcagt cagacgttcg gggggacggg agagttcctc tactacgtca tgccattcgt
     1441 cgaaggggag aacctccgtg accgtcttgc ccgcgagaaa cagctgcccg tcgccgacgc
     1501 ggttcggatc gccaccgagg tcgccgccgc gctcggctac gcccaccgcc acggcgtgat
     1561 ccaccgcgac atcaagcccg agaacatcct gctccacgac gggagagcac tcgtcgccga
     1621 cttcgggatc acgctcgcca tctccagcgc cggcggcacc cgcatcaccg agaccggaat
     1681 gtcgctcggc accccgcatt acatgagtcc cgagcaggcg atgggcgagc gcgagatcac
     1741 cgcccgctcc gacatctacg ccctcggcgt ggtcacctac gagatgctgg tgggcgagcc
     1801 gccgttcacc gggcccacgg cgcaggcgat catcgccaag gtgatgaccg acgagcctcg
     1861 gccgcccacc ggacaacgga aaacggtgcc gccggccgtc gaaaccgctg tgctcaccgc
     1921 gctcgccaag cttccggccg accggttcgg gagcgcggcg gagttcgcgg cggcgctcac
     1981 ctcgccggtc gcgccgaggc cgtcgcgcgc cgcccggccc tcccggctcg ccctcgcggc
     2041 cgtaggactc ggtgccctgg tcctcggcgc cgccataggg gcgctcgtcg ccggacgtcg
     2101 cgactcggcg aagccctcct tcggcaccgc gttcaaggtg acgtacgagc cctcgatcga
     2161 ggtccacccc gcgctgtcgc ccgacggcag attcctggcc tacgcggccg ggcatccgat
     2221 tcacaccaga ttgtacgtgc gccaagtgag tggcggccgg cccacgctcc tcaccgacga
     2281 ttccaccgcg gtcgaggtct cgcccagctg gtcgccggac gggacccgga tcctctacgc
     2341 caatcagcgc ggactgttct cggtcgcggc ctcgggcggc actccgcggc aggaggcacc
     2401 ggcccgtccg tccgggccga tcatctggtc gcagtggtcg cccgacggcg cgaccgccgc
     2461 gtacgtggtg gcggactcga tcttcctcaa gccgaccggc gccgcgccac ggttcctcgc
     2521 caccagcacc agtgtcaccg gctgccgctg gtcgccggac ggcacccgcc tcgtgtgtgc
     2581 cgcgggaaac gcctactacc tcacggtcgg cgcgctcttc gggaacctgg cgccgagctg
     2641 gatcgagctg ttcgacgtgc gaagcggcgc cggcacggtg ctgaccgaca gggccggtat
     2701 caaccattca ccggtctggt ctgccgacgg ccggttcatc tattacatct ccgaccgcga
     2761 aggtccgact gacatctatc ggatccccac gagcggcgga cgcgccacgc ccgagcggct
     2821 caccgtcgga ctcggcgcgc agagcctctc gctctccgcc gacggccacc gtctggccta
     2881 taacgtgtac cgcactgtcg ggaacgtctg gtcgctgccg tggggtcgcc ggccgatgag
     2941 tctgcgcgac gcggtccagg tcacgcgcgg cacccagagc gtggagaacc cgagcgtgtc
     3001 ggccgatggg aagacgctct acttcgacag cgacctgagc ggcacgtcgc agatctatcg
     3061 aataccggtc ggcggcgggg agcaggagcg gctcaccacc gacaatcatc aggacttctc
     3121 gccccaggtc tctcccgacg ggcacacggt ggtcttccat tccacccgca ccggctcgcg
     3181 cgaggtcttc ctgctgtcgc tcgacgacgg gaccgtgacg caggtgaccg acaccccgga
     3241 ccaggaggag gtgttgcccc actggtcgcc ggatgggagg atgttggcgt ggggcattct
     3301 caacggggcc cacggcatcc gcctcgcgcg gcgggggccg gacggatcgt tcggcaagcc
     3361 gatcgagaag ctcggctggg gctccacccc cagcttctcg ccggacgggc ggtggctcgc
     3421 gttcgccacc gcgccggtcg gggtccgccg gctgttcgtg atgccggtgg actccggcgc
     3481 cccgcggtcg ccggtggatt cgggcggcgc gccgccgccg gatgtgacct accccaagtt
     3541 ctcactcgat ggccgcgaga tcctcttcct gggctgggac gaggccaccg gcatgcccgg
     3601 gatctgggcg gtgccctggc ccggcggtgg gaagcccgag ctggtcctcc ggttcgatga
     3661 cccggtgcgg gcgccgtacc gatcctattg gacgctcagc cgtgaccgcc tcttcgtgct
     3721 gctccaggaa tccgagagcg acgtgtgggt ggtagagacc ggagggatgt aggcattccc
     3781 ttgttcgggg ctcgccgggc gataggttat ccccatccca gcaggacccc ccatccgaga
     3841 gaccggagac cctatgaccc gtcgaatcgc agtgtgcctc gtggccctgg cgctcgcctt
     3901 gcccctcccg gcgttcgccc agggtggcgg cggagacctt cgcgcccaga tcacgaagat
     3961 gggccaggcc tggcagacgg cctacaacgc gggtgacgcc gccgcactca ccgcgctcta
     4021 caccacggac gccaagctca tggcacccgg agccgaaccg gtctccggct cggcggccat
     4081 ccaggccctc ttcaaggccg acatggccaa tggcgccaag aatttcctga ccacgggaga
     4141 cgtcatcggc
//
LOCUS       DATIFF010000519         8067 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_682279, whole genome shotgun sequence.
ACCESSION   DATIFF010000519 DATIFF010000000
VERSION     DATIFF010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8067
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_682279"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..989
                     /locus_tag="VLD58_07750"
     CDS             <1..989
                     /locus_tag="VLD58_07750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54235.1"
                     /translation="SWAAAVTLGDSAGAARWRDRASDSMRMNFAQKLVKISLHSVTVG
                     FPLTDARWANETLRRDGATAQERTAAWLGERAVAFAEGRLVSFGGPGLEDNAWGTFNI
                     VQQAVVEPPYRPEARAFLARGVRARSQFPTGGVAVDWPPSRDCFGELFRVTTGDTSAT
                     RQAIRRLREFATLAAPPVAPDLWRPLEFRVCPLLLETLLEGGRDRSATSRLEALDRLM
                     QDGPRWLSLGPPTAPTVAANWTIARLREAQGDIPAALAAIRRRESNYYPAYLWTLPAF
                     LRQEGRLAALAGDTAGARRAYDHYLTLRTDPDPPFQPQRDSVLAERTALGSR"
     gene            1024..3684
                     /locus_tag="VLD58_07755"
     CDS             1024..3684
                     /locus_tag="VLD58_07755"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LpqB family beta-propeller domain-containing
                     protein"
                     /protein_id="HSB54236.1"
                     /translation="MSTIPERLTAALAERYRIERELGAGGMATVYLAQDLKHDRRVAI
                     KVLRPELAAVIGAERFLREIKTIANLSHPHILGLIDSGEVSGTAYYVMPFVEGESLRA
                     RLSREKQLPINEAVRLATEIAGALDYAHRHGVIHRDIKPENILLHDGAALVADFGIAL
                     AVSSAGGTRMTETGMSLGTPHYMSPEQAMGEREITGRSDIYALGCLTYEMLVGDPPFT
                     GSTAQAIVAKVMTEKPAPPSRFRETVPAAVEEAVLTALAKLPADRFATAAEFATALAG
                     GGSSTGRFGGAAHARVPASSPGRRLVIGGALVALPLIGFALGRLLGRSHQTELPPSRL
                     SVLAPFLGSSGLARFRQIAITPAGDAIVYAGASGSTTNSLYLQRLDATDPVEIAGSTS
                     LGGVAITSDGRTVLGTTLNSGYRIPIEGGTPRQSPLPANNLGGNWGPDGSYWFTESNA
                     TGIVRLTPGDSLIPIPLPREKARGLRIQQVLDAGRMALVTNAPSGTASGPGLLLDLKT
                     GETTTIVDRPVVELRSVAGELLCVLPDGSITAAPFDTRRYRILGPAVQIATGVALTGT
                     GIAQFSVADNGTLAYIPESPRSLVLIDRSGNARTVLAEQPNVHAPHFSPDGRRISFDI
                     TSAEGRDVWTYTLDQHTISRATFAHDGHDATWTPDGQLLTYASFKSGVLGIYRTRPGS
                     TQPAESLLASDRLTYTGTWLRDGSALITNGNDLQGASNSDIVRVANGGRGPIEPLVAS
                     TYLESYAAPSPDGRWLAFASDQSGRQEVYVQPMDGKGDQVQVSQEGATEPVWGPDGRE
                     LFYRANRAGQAVLAVTTLRTAPSLAIVSQQVLFPISDMVGTAPHANFDIAPDGRTFAM
                     VRRSPGSRIVVIQNLPGLLRRLRGPATATP"
     gene            3805..6414
                     /locus_tag="VLD58_07760"
     CDS             3805..6414
                     /locus_tag="VLD58_07760"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB54237.1"
                     /translation="MERQLGRGGMATVFLAQDLKHKRPVALKVLHPELGHALGPERFH
                     REVELAARLQHPHILTVLDSGEAAGQLWFTMPFVDGESLRDRLTRERQLPVDEAVRIA
                     TETARALDYAHRQGIIHRDIKPENILLTKDGDTLVADFGIARALTGGGEKLTETGMAV
                     GTPTYMSPEQASGERQLDARTDVYALGAVLYEMLAGEPPFTGATAQAVIAKRFSGEVP
                     KVRAVRPSVPPQVEAAVSRALAPVAADRFASAAEFAKSLGGSTTSAATAARPSTPAMA
                     APVTGTAAARPPRRVPAGLALLLIGFLIGVGVLFAWKRGGHSAGGGQKVIAVLPFENQ
                     GDSTQEYFADGITDEVRGKLAALPGLQVIASGSSREYRHTDKPLSRIASELGADYLLV
                     AKVRWARNPDGTSEVRVSPELVGLSEGKPTTRWQQAFDASLTNVFKVQADIASQVAEA
                     LDVALADSVSRKIAARPTENLPAYDAFLRGEQIFVTQAANDAVSLRRATAYYQQAVAL
                     DSSFTLAWARLSRTQALLYANGTPEPGLADGALRAGQRALALDPRSVEARISLAGYER
                     DVKTDLVRARQYLEEALRLEPSNAVALSSIAALDGMTGQWDSAMVHAREAVRLDPLSV
                     VSALRLGNALRKTGRYQEARAELDRGRALVPGNLALLEARVMVELRAGNLDSARAIIR
                     AAAARTEPAPLVAYFGNYWDLFWALDPTQQQLLLTLSPAEFDGDRASWAIIQAQTLWI
                     LGDKNRARAYADTSRMEGEKLIRLTNNDPQRLLFLGLAQAYLGQKVDAIRNGERGAGA
                     VAPALDGVTGPYFQHVLARIYVLTGEYDKAIDRLEPLLRTPYDLSPGWLRIDPNFAPL
                     KGNPRFDKLLAGP"
     gene            6541..>8067
                     /locus_tag="VLD58_07765"
     CDS             6541..>8067
                     /locus_tag="VLD58_07765"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB54238.1"
                     /translation="MERQLGRGGMATVFLAQDLKHKRPVALKVLHPELGHALGPERFQ
                     REVELAARLQHPHILTVFDSGEAAGQLWFTMPFVEGESLRDRLNRETQLPVEDAVRIA
                     IEAARALEYAHQHGVIHRDIKPENILLTTDGSTLVADFGIARALSGDVTALTETGMAV
                     GTPAYMSPEQASGERTLDARTDIYALGCVLYEMLAGEPPFTGPTVQAIISKRMRGEVP
                     DVRSARSTVPKPVGDAVNKALAPVPADRFASAADLVKALSAASTTGFTAARPSTGATR
                     PEAPGARPARRIPAGFALLLVGFLVGVGVLFAWRRGGHASAGTGRKVIAVLPFENQGD
                     TAQAYFADGITDEVRGKLTGLPGLQVIASASSAEYRASSKPLEKIGDELGADYLLVAK
                     VRWARGADGTLQVRVSPELVALQGGKPTSQWQKTFDASLTNVFQVQADIAGQVAQALD
                     VALTDSVSQELVARPTGNFPAYDAYLRAEQIGSTVNSPPGIRRALVYFRQAVALDPNF
                     A"
BASE COUNT         1234 a         2912 c         2738 g         1183 t
ORIGIN      
        1 tgtcgtgggc ggccgcggtg actctcggcg acagcgccgg ggcggcgcgc tggcgtgacc
       61 gggcgagcga ctcgatgcgg atgaactttg cgcagaagct ggtgaagatc tcgctccaca
      121 gcgtcacggt cgggttcccg ctgacggatg cgcgctgggc caacgagacg ctccggcggg
      181 acggggcaac ggcccaggag cgcaccgcgg cctggctggg ggagcgggcg gtcgcgttcg
      241 ccgagggacg gctcgtgagc tttggaggcc ccggcctcga ggacaacgcc tggggcacgt
      301 tcaacatcgt ccagcaggcg gtggtcgagc cgccctatcg tcccgaggcg cgggcgttcc
      361 tcgcacgcgg cgttcgcgcg cggagccaat tccccactgg cggcgtcgcc gtcgactggc
      421 cgcccagccg cgattgtttc ggggagctgt tccgggtgac gaccggcgat accagcgcca
      481 cccgacaggc gatccggcgg ctccgtgagt ttgccaccct cgcggcgcca ccggtcgccc
      541 ccgacctgtg gcgtccgctc gaattccgcg tctgccccct gctcctcgag accttgctgg
      601 agggaggccg cgaccggagc gcgacctcgc gcctcgaggc cctcgaccgg ctcatgcagg
      661 acggcccccg ctggctctcg ctcgggccgc caaccgcccc gacagtcgcc gccaactgga
      721 ccattgcccg gctgcgcgag gcccagggcg acatcccggc cgcgctggcc gccattcgcc
      781 ggcgcgagag caattactat ccggcgtacc tctggaccct gcccgccttt ctccggcagg
      841 aaggccgcct cgccgcgctg gcgggcgaca ccgcgggcgc gcgccgggcc tacgaccact
      901 acctcaccct gcggaccgat cccgatccgc cgttccagcc ccagcgggat tcggtcctcg
      961 ccgagcgcac tgcgctcggg tcccgatgaa aggcatgtgg atgccgagcc gcaggaccct
     1021 gtcatgagca ccatcccgga gcgcctgacc gccgccctcg ccgagcgcta ccgcatcgag
     1081 cgcgagctcg gggccggcgg catggccacg gtctatctcg cccaggacct caagcacgat
     1141 cggcgcgtcg cgatcaaggt gctccgcccc gagctcgccg ctgtcatcgg ggccgagcgc
     1201 tttctgcgtg agatcaagac gatcgccaac ctgtcgcatc ctcatatcct ggggttgatc
     1261 gacagcggcg aggtcagcgg caccgcctac tacgtcatgc ccttcgtgga gggggaatcg
     1321 ctccgcgccc gcctgagccg ggagaagcag ctcccgatca acgaggcggt gcggctcgcg
     1381 accgagatcg ccggcgcgct ggactacgcc catcggcacg gcgtcatcca ccgtgacatc
     1441 aagccggaga acatcctgct gcacgacggc gccgcgctgg tcgccgattt cgggattgcg
     1501 ctggcggtaa gctccgccgg cgggacccgc atgaccgaga ccggcatgag cctcggcacc
     1561 ccgcactaca tgtcccccga acaagccatg ggtgagcggg agatcaccgg tcgcagcgat
     1621 atctacgccc tcggctgcct gacttacgag atgctggtcg gcgatccacc gtttaccggc
     1681 agcaccgccc aggccatcgt tgccaaggtg atgacggaga agccggcgcc accgtcgagg
     1741 ttccgcgaga ccgtgccggc ggcagtggag gaggcggtcc tcaccgcgct ggccaagctc
     1801 ccggccgacc gcttcgcgac cgccgccgag ttcgcgacgg cactcgccgg cggcggctca
     1861 tcaaccggcc ggttcggcgg cgcggctcac gcccgagtcc cggcctcatc gcccggacga
     1921 cggctggtca tcggcggcgc actcgtggcc ctgccgctga tcggctttgc gctcggccgg
     1981 ctgctgggac ggtcccatca gaccgagctg ccgccatcac ggctctccgt tctggccccg
     2041 ttcctcggtt cgagtggcct ggcccgattc cgtcagatcg ccatcacccc ggccggtgat
     2101 gcgatcgtct atgccggcgc atccgggagt accaccaatt ccctgtacct gcagcgactg
     2161 gacgcgaccg acccggtcga gatcgccgga tcgaccagcc tggggggagt ggccatcacc
     2221 agcgatgggc gcaccgtgct tggcaccacg ctcaacagcg ggtaccgcat tccgatcgag
     2281 ggcggcaccc cccggcagag tcccctccct gccaacaacc tcggtggcaa ctggggcccg
     2341 gatggctcct actggttcac ggagagcaat gcgaccggga tcgtgcggct gacaccgggc
     2401 gactcgctga tcccgattcc actgccgcgg gagaaggcgc gaggcctccg catccagcag
     2461 gtgctcgacg ccggccggat ggcgctggtg accaatgcgc cgagcgggac ggcgagcgga
     2521 cccgggttgc tgctggacct caagaccggt gagacgacca ccatagtgga tcgtccggtg
     2581 gtggagcttc gcagcgtggc aggggagttg ttgtgtgtcc tgccggacgg ctcgatcacc
     2641 gccgccccct tcgacacccg ccggtaccgg atccttggcc cggcggtcca gatcgccacc
     2701 ggtgtcgcgc tgaccggtac cggtattgcg cagttctcgg tggcggacaa cggcacgctc
     2761 gcctacatcc ccgagtcgcc gcgatccctc gtcctgatcg accggagcgg caacgcgcgg
     2821 acggttctgg cggagcagcc gaatgtccac gccccgcact tctcccccga tggccgccgc
     2881 atctcgttcg acatcacgtc ggcggaagga cgggacgtct ggacctacac cctggatcag
     2941 cacacaatct cccgcgccac ctttgcgcac gacggtcacg acgccacctg gaccccggat
     3001 gggcagctcc tcacctacgc atcgttcaag agcggcgtcc tcggcatcta ccggacccgc
     3061 cccggcagca ctcagcccgc ggaatcgctg ctcgcctccg accgtctgac ctacactggt
     3121 acctggctcc gcgacggcag cgcgttgatc accaatggaa acgatctgca gggcgcctcg
     3181 aactcggaca tcgtgcgggt ggccaacggc ggccgcgggc cgatcgagcc gctggttgct
     3241 agcacctacc tggagtccta tgccgcgccc tcacccgacg gacgttggct ggcgttcgcg
     3301 tcggaccagt cggggcggca ggaggtctac gtccagccga tggacggcaa gggggaccag
     3361 gtgcaggtgt cgcaggaggg ggcgacggag cctgtctggg gaccggatgg gcgagagctc
     3421 ttctaccggg ccaaccgcgc gggccaggcc gtgctggcag tcacgacact tcggaccgcc
     3481 cccagtctcg ccatcgtatc gcaacaggtg ctcttcccga tttcggacat ggtcgggacg
     3541 gccccgcatg cgaatttcga catcgcgccg gacggtcgca cctttgcgat ggtccgccgg
     3601 agtccgggaa gccggatcgt ggtgatccag aatcttcccg ggctgctgcg ccgcctccgc
     3661 ggtccggcca ctgccacgcc atgaggcgcg ccgggttgct ctggtgacac ccgaggtcag
     3721 gccgtagttt tcctccgact ctcccgggaa tctcagctga ccgacctgcg cgctactctc
     3781 caggccgccc tgcccagcta cgcgatcgag cgccagctcg gccgcggggg aatggccacg
     3841 gtgttcctgg cccaggacct caagcacaaa cgccccgtcg ccctgaaagt cctgcacccc
     3901 gagctgggcc atgccctcgg cccggaacga ttccatcgtg aggtggagct ggcggcccgg
     3961 ctgcagcatc ctcacatcct gacggtgctc gactcgggag aggccgcagg ccagctctgg
     4021 ttcaccatgc cgttcgtcga tggtgaatcg ctgcgtgacc ggctcacccg cgagcggcag
     4081 ctcccggtgg acgaggcagt ccgcatcgcc accgagaccg cccgggcgct cgactacgcc
     4141 caccgccagg gcatcatcca tcgcgacatc aagccggaga acatcctgct gacgaaggac
     4201 ggcgacaccc tggtggccga cttcggcatc gcgcgggccc tgactggcgg cggggagaaa
     4261 ctgaccgaga ccggtatggc ggtgggcacc cccacctaca tgagcccgga gcaggcctcg
     4321 ggcgagcgcc agctggatgc ccgcaccgat gtctacgcgc tgggcgcggt gctctacgag
     4381 atgctggccg gcgagccgcc ctttaccggc gctaccgccc aggccgtcat tgccaagcgc
     4441 ttcagcggcg aggtgccgaa ggtgcgggcg gtgcggccct cggtgccacc gcaggtggaa
     4501 gcggcggtct cccgggcgct ggcccccgtc gcggccgacc ggttcgcgag tgccgcggag
     4561 ttcgccaaat cactgggcgg gagcaccacc agcgcggcca cggctgcgcg ccccagcacc
     4621 ccggcgatgg cagcgcccgt gaccggcaca gccgccgccc ggcccccccg ccgggtgccg
     4681 gccggactcg ccctgctctt gatcgggttc ctgatcggcg tgggggtgct gttcgcctgg
     4741 aagcgcggcg ggcacagcgc cgggggcggc cagaaggtga ttgccgtcct gccgttcgag
     4801 aaccagggcg actcgaccca ggagtacttc gccgacggca tcacggacga ggtccggggc
     4861 aagctcgccg cgctgcccgg cctccaggtc atcgcgagcg gcagctcgcg ggagtaccgt
     4921 cacacggaca agccgctgtc ccggatcgcc agcgagctgg gcgcggacta cctgctcgtg
     4981 gccaaggtgc gctgggccag gaaccccgac ggcacctcgg aggtccgggt gagcccggag
     5041 ctggtgggac tgtccgaggg aaagcccacc acccggtggc agcaggcgtt cgacgcctcg
     5101 ttgaccaacg tcttcaaggt gcaggccgat atcgcgagcc aggtggccga ggccctggat
     5161 gtcgcgctgg ccgattcggt gagccggaag atcgcggccc ggcccaccga gaacctgccg
     5221 gcctacgacg cctttctccg cggcgaacag atcttcgtta cccaggccgc caacgacgcg
     5281 gtctccctcc gtcgcgccac cgcctactat cagcaggccg tcgcgctgga ctccagtttc
     5341 acgctggcct gggcccggct cagccgcacg caggcgctgc tgtacgccaa cggcacgccc
     5401 gaacccggac tggcggacgg cgcactccgc gcagggcagc gcgccctggc tctcgacccc
     5461 aggtcagtcg aggcccggat ctccctggca ggctacgagc gggacgtgaa gactgacctg
     5521 gtccgagccc gtcagtacct ggaggaggca ctccggctcg agccgagtaa cgcggtagcc
     5581 ctcagcagca tcgcggccct ggacggcatg accggccaat gggattccgc gatggtccat
     5641 gcccgcgagg cggtccggct ggatccgctg tcggtcgtct ccgcgcttcg gctggggaac
     5701 gcactgcgca agaccggccg gtatcaggaa gctcgggccg aactggaccg cggtcgcgcc
     5761 ctggtgccgg gaaacctcgc cctgctcgag gccagggtca tggtcgaact cagggccggc
     5821 aatctcgatt cggcccgggc aatcatccgc gctgccgcgg cgcggacgga gccggcgcca
     5881 ctggtcgcct atttcggcaa ctactgggac ctgttctggg cgctggaccc gacgcagcaa
     5941 caattgctgc tgaccctgtc accggcggag ttcgacggcg accgcgcctc ctgggccatc
     6001 atacaggccc agaccttgtg gatcctgggc gacaagaatc gggcccgagc ctacgccgac
     6061 accagccgga tggaagggga gaagctgatc aggctgacca acaacgaccc gcagcggctg
     6121 ctcttcctgg ggctggccca ggcctacctg ggtcagaagg tggatgccat ccgcaacgga
     6181 gaacgcgggg ctggagccgt ggctccggcg ctggacgggg tgactggtcc ctacttccag
     6241 cacgtcctcg cgcggatcta cgtcctcacc ggcgaatacg acaaggcgat cgaccggctg
     6301 gagccgctgt tgcggacgcc gtacgacctc tcccctggct ggctccggat cgatcccaac
     6361 ttcgcgccgc tcaagggcaa cccccgcttc gacaagctgc tcgccggccc ctgacagggc
     6421 cggcgcgccc cgctctggtg gggcgaatcg gtccggccta agtttgcaga cacctccgct
     6481 cgagatctcc cgctgactga ccttcgcgcg accctccaag ccgccctgcc cgcctatgcg
     6541 atcgagcgcc agctcggccg cggtggcatg gccacggtat ttctggcgca ggacctcaag
     6601 cacaagcgcc ccgtcgccct gaaagtcctg caccccgagc tgggccacgc cctcggcccg
     6661 gagcggttcc agcgcgaagt ggagctggcg gctcggctgc agcatcccca catcctcacc
     6721 gtcttcgatt ccggcgaagc ggccgggcag ctctggttca ccatgccgtt cgtcgagggc
     6781 gagagcctgc gcgaccggct gaaccgcgaa acccagctgc cggtcgagga tgcggtccgc
     6841 atcgccatcg aggcggcccg ggcgctcgag tacgcccacc agcacggcgt catccatcgc
     6901 gacatcaagc ccgaaaacat cctgctcacc accgacggct ccaccctggt ggcggacttc
     6961 ggcattgcgc gggcgctctc gggcgacgtc accgcgctga ccgagaccgg gatggcggtg
     7021 gggaccccgg cgtacatgag tcccgagcag gccagcggag agcggacgct cgacgcacgc
     7081 accgacatct atgcgctggg ctgtgtgctg tacgagatgc tggcggggga gccgccgttt
     7141 accggcccga cggtgcaggc gatcatcagc aagcggatgc ggggcgaggt gccggacgtg
     7201 cgctcggccc ggtcaaccgt gccgaagccg gtgggcgacg cggtgaacaa ggcgctggcg
     7261 ccggtgccgg ccgaccggtt cgcgagcgcg gcggacctgg tgaaagcgct cagtgcagcg
     7321 agtaccaccg ggtttaccgc ggcccggccc agcaccgggg ccacccggcc tgaggcgcct
     7381 ggtgcgcgcc cagcgcgacg gatccccgcc ggcttcgcgc tcctgctggt tggcttcctg
     7441 gtcggcgtcg gtgtgctctt cgcgtggcgg cggggtggcc atgcgtctgc cggcaccggc
     7501 cgcaaggtca tcgcggtgct ccccttcgag aaccagggcg ataccgccca ggcctacttt
     7561 gccgacggca tcaccgacga ggtgcggggc aagctcaccg gactccccgg cctccaggtg
     7621 atcgcaagcg cgagctcggc ggaataccgg gccagcagca agccgctgga gaagatcggc
     7681 gacgagctgg gcgccgacta tctgctggtg gccaaggtgc gctgggcccg cggggcggac
     7741 ggcacgctcc aggtgcgggt gagcccggag ctggtggctc tgcagggcgg caagcccacc
     7801 agccagtggc agaagacctt cgatgcctcg ctcaccaacg tcttccaggt ccaggccgat
     7861 atcgcgggcc aggtagccca ggcgctcgac gtggcgctca ccgacagcgt gagccaggag
     7921 ctggttgcca ggcccacggg caactttccc gcctatgacg cgtacctgcg cgcggagcag
     7981 atcgggagca cggtgaattc acccccggga atacgccggg cgctggtgta cttccggcag
     8041 gccgttgcac tggacccgaa ttttgcg
//
LOCUS       DATIFF010000520         1612 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_67942, whole genome shotgun sequence.
ACCESSION   DATIFF010000520 DATIFF010000000
VERSION     DATIFF010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67942"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1612
                     /locus_tag="VLD58_07770"
     CDS             <1..>1612
                     /locus_tag="VLD58_07770"
                     /inference="COORDINATES: protein motif:HMM:NF016768.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate synthase central domain-containing
                     protein"
                     /protein_id="HSB54239.1"
                     /translation="SVYSFFRQRFAQVTNPPIDPLRESVVMSLRMHMGKHGSFLLEHP
                     HLARVLRVDHPVLLDEEMASLRNMPGFSCVTLQTTWPVAEGPEGLRLGLDRLCASAEH
                     AARNGARLLVLSDRTADQDHAPIPMLLALGAVRRYLMDNGLRMRLGIVAETGDAWDIH
                     HFATLIGYGCEAVYPWLALQSVTALFSETETADETPEEPVAPAGRKRTSRYDLVGDRP
                     SPEEARAKFRASAEKGILKIMSKMGISVLPSYCGAQIFECLGLGEEVVQRCFRATESS
                     IGGIGFEELAEDVLIRHRSAYGEAAGAELTVPDYGRVRFRKEGEEHAWAPPVVVALQK
                     AVGNGKAPASASFDEGYSKFKQFLAKVDERRPTAPRDLLGFKPATAIPLSEVESAESI
                     MRRFVSSAMSLGALSPEAHATVSIAMNRIGARSNSGEGGEDPFNYHPLPNGDRIDNRI
                     KQVASGRFGVTAEYLIRAEELEIKIVQGAKPGEGGQLPGHKVTELIARLRHSVPGIPL
                     ISPPPHHDIYSIEDLAQLILDLKTVNPRA"
BASE COUNT          262 a          530 c          561 g          259 t
ORIGIN      
        1 gtcggtctac agcttcttcc gccagcggtt cgcgcaggtc accaacccgc cgatcgaccc
       61 gctccgggaa tcggtggtaa tgtcgctccg gatgcacatg gggaagcacg gctcgttcct
      121 cctcgagcat ccgcatctgg cccgggtgct tcgggtggat cacccggtgc tgctcgacga
      181 ggagatggct tcgctccgga acatgccggg cttctcctgc gtcaccctgc agacgacctg
      241 gccggtggcg gagggtcccg agggactccg gctcgggctc gaccggctct gcgccagtgc
      301 cgagcatgcg gccaggaacg gcgcgcggct gctggtgctg tcagaccgca ccgccgacca
      361 ggaccatgcc ccgatcccga tgctcctcgc gctgggcgcg gtgcgccgtt acctgatgga
      421 caacggcctc cgcatgcggc tcggcatcgt ggccgagacc ggtgacgcgt gggacatcca
      481 tcatttcgcc acactcatcg ggtatggctg cgaggcggtg tatccctggc tggcgctcca
      541 gtcagtgact gccttgttca gcgaaacgga aacggctgac gagacgcccg aggagccggt
      601 ggcgcccgcg ggacggaagc ggaccagccg ctacgatctc gtgggagacc gcccgtcgcc
      661 cgaggaggcc cgcgccaagt tccgcgcgtc ggccgagaag ggcattctca agatcatgtc
      721 gaagatgggg atctcggtgc tgccttcgta ctgcggcgcc cagatcttcg agtgccttgg
      781 cctgggcgaa gaagtggtgc agcggtgctt ccgcgcgacc gaatcgtcga tcggcggcat
      841 cggcttcgag gaactggcgg aggatgtgct catccgccat cgcagtgcct atggcgaggc
      901 ggccggagcg gagctgacgg tgccggatta cggcagggtc cgcttccgca aggaaggcga
      961 ggagcatgcc tgggccccgc ccgtagtggt ggccctccag aaggcggtgg gcaacggcaa
     1021 ggcgccggcc agcgccagct tcgacgaggg ctactcgaag ttcaagcagt tcctggccaa
     1081 ggtggacgag cgccggccca cggcgccacg tgatctcctc gggttcaagc cggcgaccgc
     1141 gattccgctc tccgaagtgg agtcggccga gtccatcatg cggcggttcg tctcctcggc
     1201 gatgtcgctg ggggcgctgt cacccgaggc acacgccacg gtgtcgattg cgatgaaccg
     1261 gatcggggcc cgctccaatt ccggcgaagg gggcgaggat ccgttcaact atcacccgct
     1321 ccccaacggc gaccggatcg acaaccggat caagcaggtg gcgagtggcc gcttcggcgt
     1381 gaccgcggag tacctgatcc gggcggagga gctggagatc aagatcgtgc agggcgccaa
     1441 gccgggcgaa ggcggccagc tcccgggcca taaggtgacc gagctgatcg cgcggctgcg
     1501 gcactcggtg ccagggattc cgctgatttc gcccccgccc caccacgaca tctattcgat
     1561 cgaggacctg gcccagctca tcctcgacct gaagacggtg aatccgcggg cc
//
LOCUS       DATIFF010000521         1090 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1605265, whole genome shotgun sequence.
ACCESSION   DATIFF010000521 DATIFF010000000
VERSION     DATIFF010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1605265"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            160..>1090
                     /locus_tag="VLD58_07775"
     CDS             160..>1090
                     /locus_tag="VLD58_07775"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HSB54240.1"
                     /translation="MKIETIRAGGSALLHLEGRLDREWADHLSGALEELVQAGVRSLS
                     LDFSKVTYASSAATRVLARWHQELTALRGEVTLVSVPPEVRESFAVAGYDSGVEAPPG
                     HGSGMDDLRRSSWHARADLSAAGNYELSACSQAGTLTCHLHGDPDRLGRTPLAAPDCH
                     PVALPERTFGLGHGAIGASHGECLERMGEFVAAAGCVAYFPTGGSRMADYLVGGGRLP
                     PRATLTSGMTCEGDFSQLVRFGAQPDAQAVPLSELAAVGLEAAGGGIAGMVIAGETAG
                     LCGVRLRKSPHPEPMRFDVPAVREWLAFAPERTY"
BASE COUNT          158 a          374 c          393 g          165 t
ORIGIN      
        1 cggaccccag gtacgggacg ctggtggaaa agctggggct gggctgagcc gggacgactc
       61 cccgcatccg gcggccatcc gggccagcgt ggcccgatcc ggcatcgcat gccgggaaac
      121 tcagcacgac aggctgaccg ccgcgcgcca ggactctgaa tgaagatcga gaccattcgt
      181 gcagggggct ccgccctgct gcacctggaa ggacggttgg atcgggagtg ggcggaccat
      241 ctctctggtg ccctcgagga actggtccag gcaggcgtcc gctcactgag cctcgatttc
      301 tcgaaagtga cctacgccag ctccgcggcc acccgggtcc tggcccgctg gcaccaggag
      361 ctgaccgccc tccgtggcga agtgacgctc gtgtccgtgc cgccggaggt gcgcgaatcg
      421 ttcgccgtcg ccgggtacga ttcgggtgtc gaggcgccgc caggccacgg gtcaggaatg
      481 gacgacctgc ggcgctcctc ctggcatgcc cgagccgacc tgtccgcggc cggcaactac
      541 gagctgtccg cctgcagcca ggcagggacg ctgacgtgcc acctgcacgg cgaccccgat
      601 cggcttggcc ggactcccct cgcagctccc gactgccatc cggtggcact tccggagcgc
      661 accttcggcc tgggccacgg ggcgatcggc gcgagccatg gcgaatgtct ggaacggatg
      721 ggagagttcg tcgcggcggc agggtgcgtc gcgtatttcc cgaccggcgg ctcgcggatg
      781 gcggactacc tggtgggagg cgggcgcctc cccccccgcg cgaccctgac atcgggaatg
      841 acctgcgagg gggacttctc tcagctggtg cgattcggcg ctcagccgga cgcccaggcg
      901 gttccgcttt ccgagctggc ggcagtcggt ctcgaggcgg ccggcggagg aatcgccggg
      961 atggtcatcg ccggcgagac ggccgggctc tgcggagtcc ggctccggaa gtcgccacac
     1021 cccgagccaa tgcggttcga tgtcccggca gtacgcgagt ggctggcgtt cgcgccggag
     1081 cgtacctact
//
LOCUS       DATIFF010000522         1504 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_990962, whole genome shotgun sequence.
ACCESSION   DATIFF010000522 DATIFF010000000
VERSION     DATIFF010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_990962"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..383)
                     /locus_tag="VLD58_07780"
     CDS             complement(<1..383)
                     /locus_tag="VLD58_07780"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HSB54241.1"
                     /translation="MQARSRARLELLITAFLFSTGGAAIKSAHFTSWQVAGLRSGVAA
                     IAVLLFLPASRRIARGTGSITVMVAVAYAATLILFVLANKLTTAANTIFLQSTAPLYI
                     LLLSPMLLKEHIHRRDLGFMAAIALG"
     gene            complement(387..>1504)
                     /locus_tag="VLD58_07785"
     CDS             complement(387..>1504)
                     /locus_tag="VLD58_07785"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSB54242.1"
                     /translation="NIAGQNTKQAKGRRRRLSRLPRLSPPPGDESAMAVRFKSGGRGG
                     DQVLVADNLTVKVGDRVLLDRFSGVIRRNDVLALVGPNGTGKTTLLSTLLGQREAATG
                     SARLGDTVDVSVYRQDLAQVPRDKTLFDIIHDLRPAWTRGQVMDHLGRFDFSGDETLR
                     RAGSLSGGELARVALAMMTLEHVNFLVFDEPTNHLDVESIEALEDAIEAYEGTVLLVS
                     HDRALLTALSSRVWYLEHGRITDYDGNFGEWEVARDERRRQADAAAREVETARKTRER
                     AEAKKQPAAKDSKAQASAQRSARRAAEQAEVKVQQLEQEIASRTEALAAPDLYSSPDG
                     TARAGTLARELEAMKNQLQQAYAAWEVATAEAERLGA"
BASE COUNT          212 a          496 c          547 g          249 t
ORIGIN      
        1 cccagggcga tcgcggccat gaagccgagg tcgcgccggt gaatgtgctc tttcaggagc
       61 atggggctga ggagcaggat gtagagcggt gccgtggact ggaggaagat ggtgttggcg
      121 gcggtggtga gcttgttcgc cagcacgaag aggatgagtg tcgcggcata ggccaccgcc
      181 accatgaccg tgatgctgcc ggtgccccgc gcaatccgcc gcgacgccgg gagaaagagc
      241 agcaccgcga tggcggcaac gccggagcgg agccccgcca cctgccagct ggtgaagtga
      301 gccgacttga tcgcggcgcc gccggtggaa aagagaaagg ccgtgatgag gagctcgagc
      361 cgggcccggg atcttgcctg catggctcag gcccccagcc gttcggcttc ggcggtggcg
      421 acttcccagg cggcgtaggc ctgctgcagc tggttcttca tggcctcgag ttccctcgcg
      481 agcgtacccg ccctggcggt gccgtcgggc gaggaataga gatcgggggc ggcgagcgcc
      541 tcggtgcggc tcgcgatctc ctgctccagc tgctgcacct tgacctccgc ctgctcggct
      601 gcccgccggg cgctgcgctg ggccgaggcc tgcgccttcg agtccttcgc ggcgggctgc
      661 ttcttcgcct cggcgcgttc ccgggtcttg cgggccgttt ccacttcgcg ggccgccgcg
      721 tcggcctggc ggcgccgctc gtcgcgggcc acttcccact cgccaaaatt gccgtcgtag
      781 tcggtgatcc ggccgtgctc gaggtaccag acccgcgagc tcagcgcggt gaggagcgcc
      841 cggtcatggc tcaccagcag gacggtgcct tcgtaggctt cgatcgcgtc ttccagggcc
      901 tcgatcgatt cgacgtcgag gtggttggtc ggctcgtcga agaccaggaa attgacgtgc
      961 tccagcgtca tcatcgcgag cgcgacccgg gcgagttcgc caccggagag cgatcccgcc
     1021 cgtcgcagag tctcgtcacc cgaaaaatcg aagcggccga gatggtccat gacctggccc
     1081 cgggtccagg cggggcggag atcgtggatg atgtcgaaga gggtcttgtc gcgcgggacc
     1141 tgggccaggt cctgccgata gacgctcaca tcgacagtgt cgcccaggcg ggcggaaccg
     1201 gtggcggcct cccgctggcc cagcagcgtg ctcagcagcg tggtcttgcc ggtgccgttg
     1261 gggccgacca gcgccagcac gtcgttccgg cggatgacgc cgctgaagcg atcgagcagg
     1321 acccggtcgc ccaccttgac ggtgaggttg tcggccacca gcacctggtc gccgccccgg
     1381 ccgccgctct tgaagcgcac cgccatcgcg gactcatcgc ccggcggtgg cgagagcctg
     1441 gggaggcggg agaggcgacg ccggcgtccc ttcgcctgtt tggtgttctg gcccgcgatg
     1501 ttcc
//
LOCUS       DATIFF010000523         2604 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_991032, whole genome shotgun sequence.
ACCESSION   DATIFF010000523 DATIFF010000000
VERSION     DATIFF010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2604
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_991032"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1019)
                     /locus_tag="VLD58_07790"
     CDS             complement(<1..1019)
                     /locus_tag="VLD58_07790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HSB54243.1"
                     /translation="MSATVPPAERLTGWRYPRTQPSLPESHATIHVPRAPGFWRKALA
                     FAGPGYLVAVGYMDPGNWATDLAGGARFGYTLLSVILLSNLMAILLQALALRLGIVSG
                     RDLAQACRDHYSRRVSFALWVLCEIAIAACDLAEVIGSAIALNLLFGIPLIWGVCLTA
                     LDVLIILLLQHRGFRYLEAFIIALVLTIGACFALELVLARPDLGAVARGLVPTTQIVT
                     NPNMLYIAIGILGATVMPHNLYLHSSIVQTRRIGRDPASKREAIRFATFDSTVALLFA
                     FFINAAILVLSAASFHWSGHQAVADIGDAHTLLAPLLGTTLASGLFAVALLASGQNST
                     ITGTLA"
     gene            complement(1016..1702)
                     /locus_tag="VLD58_07795"
     CDS             complement(1016..1702)
                     /locus_tag="VLD58_07795"
                     /inference="COORDINATES: protein motif:HMM:NF014762.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent transcriptional regulator"
                     /protein_id="HSB54244.1"
                     /translation="MNTAIGHEPLTRSVEDYLKVIYSLSPEGRTASTSDIAHRLELSA
                     PSVSGMIKRLSEQGLLEHIPYKGVQLTAEGRRAALRMIRRHRILEAYLVVRLGYTWDA
                     VHEEADRLEHAVSEGLIERMADALGNPEADPHGEPIPTAEGWIEEVEATPLAEILAGE
                     TVEIRRVTAGDPDRLRYLASIGLQPGALVVVVERQPFSGPITLRVAGQERVIGHELAE
                     CLLCGRSRGA"
     gene            complement(1837..2448)
                     /locus_tag="VLD58_07800"
     CDS             complement(1837..2448)
                     /locus_tag="VLD58_07800"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005777 - peroxisome [Evidence IEA];
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003986 - acetyl-CoA hydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0008413 - 8-oxo-7,8-dihydroguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0009132 - nucleoside diphosphate metabolic
                     process [Evidence IEA];
                     GO_process: GO:0015938 - coenzyme A catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HSB54245.1"
                     /translation="MLRRILPLARPLTPPLPPSLAALAERLARRAATETSDPERRWAA
                     VALILAPDPASLLLIRRAERAGDPWSGQVGLPGGRRGPEDADLIETATRETVEEVGID
                     LTRAHRLGALDDVAPRTPTLPPIAVRPYVFALPGRPPVRLNPEVASCHWVEVSHLARP
                     GASRLTTVTIRGNSLQVPAFMLEGMVVWGMTERILASFLQAVS"
     gene            complement(2412..>2604)
                     /locus_tag="VLD58_07805"
     CDS             complement(2412..>2604)
                     /locus_tag="VLD58_07805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54246.1"
                     /translation="GADFERLVRNGTTVCCPQCSERKVERRMSLPARPAGAGKQADFS
                     KLGPPPGGCCGGSCHSHGH"
BASE COUNT          429 a          860 c          957 g          358 t
ORIGIN      
        1 gccagcgtgc ccgtgatcgt cgagttctgc cccgacgcca gcagcgccac ggcgaagagc
       61 ccgctcgcca gcgtggtgcc gagcaggggg gcgaggagcg tgtgcgcgtc gccgatgtcg
      121 gcgacggcct gatgcccgct ccagtggaac gaggcggcgg agagaaccag gatcgccgcg
      181 ttgatgaaga aggcgaacag cagggccacc gtggaatcga aggtggcgaa gcggatggcc
      241 tcgcgtttcg acgccgggtc gcggccgatg cgccgggtct gcacgatgga ggagtgcagg
      301 tagaggttgt gcggcatgac cgtggcgccg aggatgccga tcgcgatgta cagcatgttc
      361 gggttggtca cgatctgcgt ggtcggcacc agcccgcggg ccaccgcgcc caggtccggc
      421 cgcgccagca cgagctcgag cgcgaagcag gcgccgatgg tcagcaccag ggcgatgatg
      481 aacgcctcga ggtagcggaa gccccgatgc tggagcagca gaatgatcag cacgtccagg
      541 gccgtcaggc agacgcccca gatgagcggg atcccgaaca gcaggttgag cgcgatggcg
      601 gagccgatca cttcggccag gtcgcacgcc gcgatcgcga tctcgcacaa tacccagagc
      661 gcgaagctga cccggcggga gtagtggtcg cggcaggcct gggcgaggtc gcgcccgcta
      721 acgatcccga gccgcagcgc cagggcctgg agcaggatcg ccatcagatt ggacagcagg
      781 atcacgctga gcagggtgta gccgaagcgc gcgccgccgg ccaagtcggt ggcccagttg
      841 cccgggtcca tgtagcccac cgccaccaga tatcccggcc ccgcgaacgc cagcgccttg
      901 cgccagaagc cgggcgcccg cggaacgtgg atcgtcgcgt gggactcggg gagactcggc
      961 tgcgtgcgcg gatagcgcca gccggtgagc cgttcggccg gagggacggt ggcgctcatg
     1021 ccccgcgact ccgcccgcag agcaggcact cggccagctc atggcctatc acgcgttcct
     1081 gcccggccac ccggagcgtg atgggtccgc tgaacggctg gcgctcgacg accaccacca
     1141 gcgctcccgg ctggagaccg atcgaggcca gatagcgcag gcggtccgga tcgccggcgg
     1201 tgacccggcg gatctccacc gtctccccgg ccagaatctc ggccagcggt gtcgcctcca
     1261 cctcctcgat ccagccctcg gcggtgggga tgggctcgcc gtgggggtcg gcctcggggt
     1321 tacccagcgc gtccgccatg cgctcgatca gcccttccga cacggcgtgc tccagccgat
     1381 ccgcctcttc gtgcaccgcg tcccaggtat aacccagccg cacgaccagg taggcctcga
     1441 ggatccggtg ccgccggatc atccgaagcg ccgcgcggcg gccttccgcc gtcagctgca
     1501 cgcctttgta ggggatgtgc tccagaagcc cctgctccga cagccgcttg atcatgccgc
     1561 tcaccgacgg agccgagagc tccagccggt gggcgatgtc gctggtcgaa gcggtccgcc
     1621 cctcggggga gaggctgtag atgaccttga ggtagtcttc gaccgaacgg gtgagcggct
     1681 cgtggccaat ggctgtgttc atgcgaatcc agtaattagg cggccctaat tttccactgt
     1741 aagtaagcta atgtcaagtg tcctcaatgc gaattacgcg ccagcatgac ggcgtcatgg
     1801 cgacacaacc gtcgccgaac aaatgtcaat ttgttgtcag gaaacagctt ggagaaacga
     1861 agccaggatg cgctcggtca ttccccagac caccatgcct tccagcatga aggccgggac
     1921 ctggagcgaa ttgccacgaa tggtgacggt agtcagacgg ctggcacccg gccgggcgag
     1981 gtgggatacc tcgacccagt ggcaggaggc gacttcgggg ttgaggcgga cgggaggccg
     2041 cccggggagg gcgaagacgt agggccgaac ggcgatgggc ggcagggtcg gggtccgcgg
     2101 cgccacgtca tcgagcgcgc ccaggcgatg ggcgcgggtg aggtcgatgc ccacctcctc
     2161 caccgtctcc cgggtcgccg tctcgatcag gtcggcatcc tcgggtccgc ggcggccgcc
     2221 cggcaggccg acctgcccgg accaggggtc gcccgcgcgc tcggcgcggc ggatgaggag
     2281 cagggaggcc gggtcgggag cgagtatgag cgcgacagcg gcccaccggc gctccgggtc
     2341 cgaggtctcg gtcgcggcgc gccgggccag gcgctccgcc agcgcggcga gggacggggg
     2401 aagcggcggg gtcagtggcc gtgcgagtgg caggatccgc cgcagcaccc gccgggcggg
     2461 ggaccgagct tgctgaagtc ggcctgcttg ccggcgccgg ccgggcgggc ggggagcgac
     2521 atccggcgct cgaccttccg ttcgctgcac tgggggcagc acaccgtggt tccgttccgg
     2581 accagccgct cgaaatcggc gccg
//
LOCUS       DATIFF010000524         1737 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1452151, whole genome shotgun sequence.
ACCESSION   DATIFF010000524 DATIFF010000000
VERSION     DATIFF010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1452151"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            180..1448
                     /locus_tag="VLD58_07810"
                     /pseudo
     CDS             180..1448
                     /locus_tag="VLD58_07810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611916.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
BASE COUNT          310 a          571 c          618 g          238 t
ORIGIN      
        1 ctcagagccc gtgaaagaat cccagcacgg ccgccgattg atcaatccgg cgccataatt
       61 cctgcatgag cacaccaccc gatccgaagc ggtctcgagt tccacaggcc accctcttcg
      121 aggtgccgga cgacctgcca ccgccgcccg aatcgatgac cccagccgcc ggtcggccca
      181 ggctccgcac cgccaaccgc cagcagatcg tcttccgggc cgctcctctt gatgccctcc
      241 tgcctcaaga ccatccagcg cggatcatct gggcctacgt cgaggggctg gacctcggtc
      301 cactgtacgt tcggatcaag gccgtcgagg gccggccggg acgcgcaccg atcgatccca
      361 agatcctcct ggctctctgg ctctacgcca cggtcgaggg catcgggagc gcccgccacc
      421 tcgatcaact ctgccgggag cacgacgcct tccgctggat cgcgggcgat gtctcgacga
      481 attatcacac gctcgccgac ttccgcaccg accacgtcgc cctgctcgat gatctgctga
      541 ccaggagtgt cgccacgctg atggccgagg ggttggtcga gctgaatcgg gtggcgcagg
      601 acgggatgcg ggttcgtgcc agtgccggtg ccgcctcgtt ccgccggcgg cccaccctgg
      661 aggaggccta cgagcaggcc caagcccaag tcgacgctct gcgggcggag gtggaggacg
      721 accccggggc cgatgaccgc cgccagcggg cggcccggga gcgggcggcg cgcgagcaag
      781 ccgagcgggt ccagaaggcg ttggaacgcc tgccggagct ggaggccaag aagaaacccg
      841 gggagaagga ccaggcgcgg gcctcgacga ccgacccgga ggccaccgtg atgaagatgg
      901 ccgacggcgg cttccgcccg gcgtacaacg tccagttcgc caccgccacc gccagtcaag
      961 tgatcgtcgg tgtggaggtg gagaccaccg gcagtgacgc gggccagatg gagccgatgg
     1021 tcggacaagt caacgagcgg tacgggattg tcccaccgga gtggctggtc gatggtgggt
     1081 tcgcccagca cgaccagatc gacgcggtca gtacgccgga ggtgggctgc acggtgtacg
     1141 ctccggtgcc caagcccaag gacccgaagg tggaccgcca cgagccgaag ccgacggaca
     1201 gtgcggcggt ggcggcctgg cgaaagcgga tggcgacgga gctcgccaag acgatctaca
     1261 aggaccgggc gtcgacggcc gagtgtgtca acgccttggc ccggggccgc gcgctggtga
     1321 tgctgacggt gcgcgggcgg ctcaaggcca aggcggtggc cctgtggcat gcgctggcgc
     1381 acaacgtgat gtgtgcggtc cgactgcgtg cgatgcggct gcgcgcggcg gtggcgcaac
     1441 cggcctgagg ggacccgatc cgagggccga gagggccggc gggccgcgtc acggtggtcc
     1501 gaaggacggc gatcggcgga gccacgaggg atcaggtcca agagatggtt cctccgctcg
     1561 cacggtcagc gcatcgggtg gttcgagcga tcggccatag agcgccagag cgggaatttc
     1621 ttcacagact ctcagtcatg gcagcactga agggaaagag cgccgattcg cagcagggga
     1681 aggatcggcc cgtcaaggtc atccgcatgc ggaaccttcg ggccaacatc tgggcca
//
LOCUS       DATIFF010000525         1076 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_375181, whole genome shotgun sequence.
ACCESSION   DATIFF010000525 DATIFF010000000
VERSION     DATIFF010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_375181"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(470..>1076)
                     /locus_tag="VLD58_07815"
     CDS             complement(470..>1076)
                     /locus_tag="VLD58_07815"
                     /inference="COORDINATES: protein motif:HMM:NF012611.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54247.1"
                     /translation="LDPVFAALAPRIEAAPRTPGREKTGGTAEHGYLYCGPSGAGHFV
                     KMVHNGIEYGIMAAYAEGLTILRHANAGKQRRTVDAETTPLRHPEHYPYDLKLADIAE
                     VWRRGSVIASWLLDLAALALLESPDLAKFTGRVSDSGEGRWTVMAAIDESVPAPVLSA
                     ALYERFSSRGEADFADKLLSALRYEFGGHEEKAAAGNGGAP"
BASE COUNT          161 a          365 c          386 g          164 t
ORIGIN      
        1 ggaccgatga gcgagttgat ctccggcggg gcacctttcc cgtcggggcc gtggcacgaa
       61 cggcaattca ggcgatagag atcggcgccg ccgagaacga acgattgttc ctcgaggtcg
      121 gcagtcttcc cctgccggaa ccccatcagg aaccggccca tcgcaccgcc taaggatcgt
      181 gagggagagc tctccccgcc tggccccggc tcgctgcgtc cggtggaggg ggcgggcgct
      241 gttcccccca tctgcccgaa ccgcgtctgg ggaatgctca gcccgaggtg tttcacccag
      301 ctcggaccct ggacggcggt gaccaggccg gccgggctcg cggccgaagc ccgagtcgga
      361 gcgcttgcgg agtcgctctg ccgcccccgc tcgccgtcct tcacacagcc gggagcccag
      421 agaagaagcg ccgcgcccgc cagcacaagc gcatccgaac gagacgtggt cacggggcgc
      481 ctccattgcc ggcggcagcc ttctcttcgt gacctccgaa ttcgtaacgc agggcggaca
      541 gcagcttgtc ggcgaagtcg gcctcgccgc gcgagctgaa gcgttcgtac aacgcggcac
      601 tgaggacggg ggctgggacc gactcgtcga tggccgccat gaccgtccag cgcccttcgc
      661 ccgagtccga cacccggccg gtgaacttcg ccaggtcggg gctctcgagg agggcgaggg
      721 cggccaggtc caggagccag gaggcgatga cgctgccgcg ccgccagacc tcggcgatgt
      781 cggccagctt caggtcgtac gggtagtgct cagggtggcg cagcggcgtg gtttcggcat
      841 cgacggtgcg ccgctgcttg ccggcgttgg cgtggcggag gatggtcaat ccctccgcgt
      901 aggcggccat gatgccgtac tcgatgccat tgtggaccat cttgacgaag tggcccgccc
      961 cgctcggacc gcagtacagg tagccgtgtt cggcggtgcc gcctgtcttc tcccgaccgg
     1021 gcgtgcgggg cgccgcctcg atacgtgggg ccagggcagc gaagacgggg tcgagg
//
LOCUS       DATIFF010000526         2379 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_529270, whole genome shotgun sequence.
ACCESSION   DATIFF010000526 DATIFF010000000
VERSION     DATIFF010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_529270"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..838)
                     /locus_tag="VLD58_07820"
     CDS             complement(<1..838)
                     /locus_tag="VLD58_07820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSB54248.1"
                     /translation="MTDQLSTLLSENRRFPPSPEFVAQANAQPGLYAAAQADRLRFWE
                     DQARALDWITPWTRVLEWTPPHAKWFVGGRLNVSANCLDRHLKTPRRNKAAIVWEGEP
                     GDRRTITYWELHREVCRAANALHKLGVKRGDRVAIYLPMIPEAAIAMLACARIGAVHS
                     VVFGGFSAESLRDRIDDAQAVCLITADAGYRRGSVVPLKRFADEALAQTPSIRHVIVV
                     QRRPGSSGDEAFANMTEERDHWWHRLLDQADPVCEPEAMDAEDLLFILYTSGTTGKPK
                     GIV"
     regulatory      1214..1306
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01051"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-GMP riboswitch class I; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="cyclic di-GMP"
                     /db_xref="RFAM:RF01051"
     gene            1402..1716
                     /locus_tag="VLD58_07825"
     CDS             1402..1716
                     /locus_tag="VLD58_07825"
                     /inference="COORDINATES: protein motif:HMM:NF024857.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HSB54249.1"
                     /translation="MVATQTTSLELAAPEHLGLESRTNFRQSAVGLLEQLPERTGRLV
                     IDLRGTRSVDSAGLGALMLIQRRASERRQVVVLRGPNDELRFLLVLTKLDDLFEVEAD
                     AV"
     gene            1732..2100
                     /locus_tag="VLD58_07830"
     CDS             1732..2100
                     /locus_tag="VLD58_07830"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB54250.1"
                     /translation="MAHAVPRRRVLFIEDEPALRSSYERAFGSRYESAYAASGAEAIR
                     LLAEHRPDVAVLDLRLPDTDGIDLLRRLRAARPGLPVIITSAYISLEPQLRVLDLPHE
                     GYLVKPFDLADLARRIDGLP"
     gene            2087..>2379
                     /locus_tag="VLD58_07835"
     CDS             2087..>2379
                     /locus_tag="VLD58_07835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSB54251.1"
                     /translation="MASPEPPLVEARGLARRYGAVRALNGVDLTLRAGEVLLILGPNG
                     AGKSTLLRSLAGLLRPTAGTVRIAGRTLTRDDPEARRPIGLLSHQSLLYDELTL"
BASE COUNT          359 a          830 c          816 g          374 t
ORIGIN      
        1 ggacgatccc cttcggcttt cccgtggtgc ccgacgtgta caggatgaac aggagatcct
       61 cggcgtccat cgcctcgggc tcgcagaccg gatccgcctg gtccagcagg cggtgccacc
      121 agtggtccct ttcctcagtc atgttggcga aggcctcgtc tcccgagctg cccggccgcc
      181 gctgcacgac gatgacgtgg cggatgctgg gcgtctgcgc cagggcctca tcagcgaagc
      241 gcttgagcgg cacaaccgag ccgcgccggt agccggcgtc ggcggtgatg aggcacaccg
      301 cctgggcatc gtcgatccga tcacggagcg actccgcgga gaacccgccg aagactaccg
      361 agtggaccgc gccgatgcgg gcgcaggcca gcatggcgat cgctgcctcg ggaatcatcg
      421 ggagatagat cgccacccga tctccgcgct tgactccgag cttgtgcaac gcgttggccg
      481 cccggcagac ctcgcggtgc agctcccagt aggtgatcgt ccggcggtcg ccgggctcgc
      541 cctcccagac gatcgccgcc ttgttgcgcc gaggcgtctt gagatgccgg tcgagacagt
      601 tggccgacac gttcaggcgc ccgcccacga accatttcgc gtgcggcggg gtccattcga
      661 ggacccgggt ccagggcgtg atccagtcga gtgctcgcgc ctggtcctcc cagaagcgga
      721 gccggtcggc ctgggcggcg gcataaagtc cgggctgggc gttggcctgg gccacgaact
      781 ccggcgacgg cgggaaacgg cgattctcgg agagcagggt gctgagctgg tcggtcatgg
      841 gtcaacagag gttggagggg caaccgacaa gccaaccgcc tcacgctggg aggcgggtgg
      901 ccccgaggtg gttcgagact cccttccacg ggatccgcga acggctggac ccgcggccga
      961 gcggccagcc gttacaatgg ctaacccgtt cccggccgga gggctagctc ccgggctcgc
     1021 cacggctgct ttcctggcct ccgggggggc ttgcagttgg ccccaaggcg ccgcggtgtg
     1081 ctaggtcctg gggccgttgc gtcgactcga cgatagtatc taaatgcctg tgaaacaacg
     1141 agttgacttg tttggcaccg ggctcgcccc ataggctggc cggaggccac aaggtctcca
     1201 cgacaactga tccgcccgat aagagcacac ccggagcgat ccggggccgc aaaactagag
     1261 gtctcaaccg cctgggcagt ggcgcgagag atagctcggt gccgaaggcg ggtgctgcgc
     1321 accaggcgcg aggcatcccg cacaacagca aggcggcgaa tgcagcgcgc ttctgtgtat
     1381 ccgggcgtgg ggaggcagca catggtggcc acgcaaacga ccagtctcga actcgcggcc
     1441 cccgagcatc tcggactcga gagccgcacc aacttccggc agagcgcggt ggggctgctg
     1501 gagcagctgc cggagcgcac cggccgcctg gtaatcgatc tgcgcggaac ccgctcggtg
     1561 gattcggccg gcctgggggc gctgatgctg attcagcgcc gggcctcgga gcgccgccag
     1621 gtcgtggtac ttcgggggcc caacgacgag ctgcggttcc tgctcgtgct gaccaagctc
     1681 gacgacctct tcgaggtcga ggccgacgcg gtgtagcgct atattcgggt catggctcac
     1741 gccgtgcccc ggcggcgggt gctcttcatc gaagacgagc ccgccctgcg ctcgagctac
     1801 gagcgcgcgt tcggctcccg ctacgagtcg gcctatgccg cgtccggcgc cgaggcgatt
     1861 cgcctgctgg cggagcatcg gccggacgtt gcggtgctcg atctccggct gccggacacg
     1921 gacgggatcg acctgcttcg ccgcctccgg gctgcgcggc ccggcctgcc ggtcatcatc
     1981 acctctgcct acatcagcct cgagccccag ctccgggtcc tggatctccc ccacgaaggc
     2041 tacctcgtga agcccttcga tctcgcggac ctggcacgcc ggatcgatgg cctcccctga
     2101 gccgccgctg gtagaagccc gcggcctcgc ccggcgctac ggcgccgtgc gggcgttgaa
     2161 cggcgtggac ctgacactgc gggccggtga ggtcctcctg atcctcggcc cgaacggcgc
     2221 cggcaagtcc acgctgctcc ggagtctggc cggcctcctg cgcccgaccg ccgggaccgt
     2281 ccggatcgcc gggcggaccc tgacccggga cgatcccgag gcccgccgcc ccatcggact
     2341 cctgtcccat cagtccctgc tctacgacga actcaccct
//
LOCUS       DATIFF010000527         3628 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_683148, whole genome shotgun sequence.
ACCESSION   DATIFF010000527 DATIFF010000000
VERSION     DATIFF010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3628
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_683148"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..807)
                     /locus_tag="VLD58_07840"
     CDS             complement(<1..807)
                     /locus_tag="VLD58_07840"
                     /inference="COORDINATES: protein motif:HMM:NF012457.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="HSB54252.1"
                     /translation="MPETIRFPENFLWGAATSAYQIEGSPLADGAGPSNWHRFAHTPG
                     MTANGDTGDVACDHYRRYEDDVRLMGELGLNAYRFSISWSRVMPEGTGAINRKGLDFY
                     QRLVDRLRDRNITPMATLFHWDLPAALEDRGGWLNRDIAGWFADYSSAMVKALGDRVG
                     LWATLNEPWVVTDGGYLHGVLAPGHRSPFETPIASHNLLRAHGAGIQAIRAAGGRQPG
                     LVVNLEPKYPASESPADLAATRRAEAYMNRQYLDPVFLGSYPEELGEIYGE"
     gene            1010..2101
                     /gene="ugpC"
                     /locus_tag="VLD58_07845"
     CDS             1010..2101
                     /gene="ugpC"
                     /locus_tag="VLD58_07845"
                     /inference="COORDINATES: protein motif:HMM:NF008653.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HSB54253.1"
                     /translation="MARVTLEGIRKIYEEKGREHVVVHGIDLVIPDGEFLVLVGPSGC
                     GKSTTLRMIAGLETITAGTLRIGDRVVNEIAARDRDIAMVFQNYALYPHMSVRENLAF
                     ALKLRKLSGDEIARRVTETAELLGLTPLLDRRPRQLSGGQRQRVALGRAIVRQPQVFL
                     FDEPLSNLDAKLRVQMRREIAALRRRLGTTTIYVTHDQVEAMTLGDRIVVMQEGRVQQ
                     VDTPLDLYRRPANTFVATFVGSPPMNLVAGAISSDGSTFRSKDGSFTLPLPGLRPDGL
                     TPGRPVILGIRPEGLAMETGGSETAGAMIEEIEPLGNETLVSLSSGGVPFTARVEGSA
                     TPRRGDAVTLTFPAAALHWFDAAGETRLG"
     gene            complement(2105..3232)
                     /locus_tag="VLD58_07850"
     CDS             complement(2105..3232)
                     /locus_tag="VLD58_07850"
                     /inference="COORDINATES: protein motif:HMM:NF013275.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSB54254.1"
                     /translation="MKLISASILSGAGCALLLFAAGCADTSEPVRLGVALSLQEEGIK
                     PSRYAAELAASEINAAGGVGGRPVELVFRDDFGNSDSAVAVANALYDSDVSAVVGPAY
                     SSMTLASAPVYNGGRRPLVQLSPSASSPLVSTAGDFTFRICPSDLAYGAALAGFAVDH
                     GFLRAAVIYVNDAYGRGVRQTFAAEYSRLGGEIIELDPFLAASPDVGVYLLRIAREKK
                     AQAIILAANQGEGLKVLAQIRAAKLNLPILGGDGMSGAERTNPALTEGMFVSSGYLVG
                     DPSPLNRKFVAAYEKMFPRAGPPDQGAAASYDAVNLLAKVVKSVGSDRAAVRNALARI
                     GTTDSAYQGVVGRVAFDSLGDVPELKVRIGLARGGILVPAQ"
     gene            complement(3229..>3628)
                     /locus_tag="VLD58_07855"
     CDS             complement(3229..>3628)
                     /locus_tag="VLD58_07855"
                     /inference="COORDINATES: protein motif:HMM:NF013811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54255.1"
                     /translation="LMFVSFNDTDDYAHLRRYDRVLDALHADDFFLRDLWHAIQASPR
                     YRGRTTLIITTDHGRGLTGATWTNHGRETPGSRDIWMAIVGPYTPNGSGAGLNVTQSQ
                     VAATVLTCLGLDPHEFSTAAAPPVAGACHP"
BASE COUNT          629 a         1232 c         1219 g          548 t
ORIGIN      
        1 ctcgccgtag atctcgccca gctcctcggg atagctgccg aggaagaccg gatcgagata
       61 ctggcggttc atgtaggctt cggcccggcg ggtcgcggcg agatcggcgg gagattcgct
      121 ggccggatac ttgggctcga ggttcaccac caggccgggc tggcggccgc cggcggcgcg
      181 gatcgcctga atccctgcgc cgtgcgcccg cagcaggttg tgactcgcga tcggggtctc
      241 gaagggactc cggtgccccg gcgcaagcac tccgtggaga tagccgccgt cggtcaccac
      301 ccacggctcg ttgagagtgg cccagagccc gacccggtcg cccagcgcct tcaccatcgc
      361 gctggaatag tcggcgaacc acccggcgat gtcacggttg agccacccgc cccggtcttc
      421 gagggcggcg ggaagatccc agtgaaagag ggtggccatc ggggtgatgt tccggtcccg
      481 gagccggtcc accaggcgct ggtagaagtc gagacccttc cggttgatgg ccccggtgcc
      541 ctcgggcatc acccgcgacc aggagatgct gaagcgatag gcgttgagcc cgagctctcc
      601 catcaggcgc acatcgtcct cgtaacgccg gtagtgatcg caggcgacgt cgccggtatc
      661 gccattggct gtcatcccgg gcgtatgggc aaagcggtgc cagttgctcg gacccgctcc
      721 atcggccagc ggggagccct cgatctggta ggccgaggtg gccgcgcccc acaggaaatt
      781 ctcgggaaag cgaatggtct ctggcatcgt ggctcagggc agttcgcaag aaagactacc
      841 acagatgaac acagatgaga acggaccaca acggatgagc tcggaatcgg agccgaaacg
      901 acgtcctctg caactcacgg aatcatccgt attcatcgcg gttcatctgt ggtaagcggt
      961 tgcggcttct ggatgtgaag cagactcgaa taccgggcgg agacactgaa tggcgcgcgt
     1021 gacgctggaa ggcatccgca agatatatga ggagaagggc cgggagcacg tggtggtgca
     1081 cggcatcgac ctggtcattc ccgacggcga gttcctggtg ctggtcgggc cttccggctg
     1141 cggcaagagc accacactcc ggatgatcgc cgggctcgag accatcaccg ccggcaccct
     1201 ccgcatcggc gaccgggtgg tgaacgagat cgccgcccgc gaccgcgaca tcgcgatggt
     1261 cttccagaac tacgccctct acccgcacat gtcggtgcgg gagaacctcg ccttcgcgct
     1321 caagctcagg aaactgagtg gtgacgagat cgcccgccgg gtaaccgaaa ccgccgagct
     1381 cctcggcctc acgccgctcc tcgaccgccg gccccgccaa ctctccggtg gccagcgcca
     1441 gcgggtggcg ctgggccggg cgatcgtccg gcagccgcag gtctttctct tcgacgagcc
     1501 gctgtccaac ctcgacgcca agctccgggt ccagatgcgg cgcgagatcg ccgccctccg
     1561 ccgccggctg ggcaccacca cgatctacgt cacccatgac caggtcgagg cgatgaccct
     1621 gggcgaccgg atcgtggtca tgcaggaagg cagagtccag caggtcgaca cgccgctcga
     1681 cctctaccgc aggcccgcga acaccttcgt cgccaccttc gtgggcagcc cgccgatgaa
     1741 cctggtggcc ggcgccattt cgtcagatgg ctcgaccttc cgatcgaagg atgggagctt
     1801 caccctcccg cttcccggcc tgcggccgga cggtcttacg ccggggagac cggtgattct
     1861 ggggattcgg ccggaagggc tggcaatgga aacgggagga agcgagacgg caggcgccat
     1921 gatcgaggag atcgaaccgc tcggcaacga aaccctggtg agcctcagct ccggtggcgt
     1981 gccgttcacc gcccgggtgg aagggagcgc cacgccccgc cggggcgacg cggtgaccct
     2041 caccttcccc gccgcagcgc tccactggtt cgatgccgcc ggcgaaaccc gcctcggctg
     2101 acgactactg cgccgggacc aggattccgc cgcgcgccag accgatccgc accttgagct
     2161 caggaacgtc ccccagcgaa tcgaacgcca cccgccccac caccccctgg taggctgaat
     2221 cggtggtgcc gatcctcgcc agcgcgttgc gcacggcggc gcggtcgctc cccaccgact
     2281 tcaccacctt cgcgagcagg ttcaccgcgt catacgacgc cgccgccccc tggtccggcg
     2341 ggccggctcg cgggaacatc ttctcgtatg ccgccacgaa cttccggttg aggggactcg
     2401 gatcgccgac caggtacccg ctcgagacga acatcccctc ggtcagcgcc gggttggtgc
     2461 gctcggcgcc ggacatcccg tcgccaccga gaatcggaag attgagcttc gccgcgcgga
     2521 tctgggccag taccttgagc ccctcgccct ggttcgccgc caggatgatg gcctgcgcct
     2581 tcttctcccg ggcgatccgc aggaggtaca cgcccacatc gggactggcc gcgaggaagg
     2641 gatcgagctc gatgatctcg ccgcccagcc gggaatactc cgccgcgaag gtctggcgca
     2701 caccccggcc gtaggcatcg ttgacataga tgaccgcggc gcgcaggaat ccatgatcca
     2761 ccgcgaagcc ggccagcgcc gcgccatagg ccaggtcgct cgggcagatg cggaaggtaa
     2821 agtcgcccgc ggtgctcacc agcggggagg aggccgaggg cgagagctgg accaggggac
     2881 ggcggccgcc attgtagacc ggcgccgagg ccagggtcat gctcgagtag gctggtccca
     2941 ccacggcgga gacatcgctg tcgtagagcg cgttcgccac cgccaccgcc gaatcgctgt
     3001 tgccgaagtc gtcccggaac accagctcca ccggccggcc accgaccccg cccgcggcat
     3061 tgatctcact cgccgccagc tccgccgcat agcggctcgg cttgatccct tcttcctgga
     3121 gcgacagcgc gaccccgagg cgcaccggtt cgctggtatc ggcgcagccc gcggcgaaca
     3181 ggagaagtgc gcaaccggcg ccggaaagaa tcgaggcgga aatcagtttc atggatgaca
     3241 ggctccagcc accggtggtg cggcggcggt cgagaattcg tggggatcga ggcccaggca
     3301 ggtgagcacg gtggcggcga cctgcgactg ggtgacgttg agtccggccc cactcccatt
     3361 gggagtgtac gggccgacga tggccatcca gatgtcgcgc gagcccggcg tctcgcgccc
     3421 atggttggtc caggtggcgc cggtcagacc gcggccgtgg tcggtggtga tgatcagggt
     3481 ggtgcggccg cggtagcgcg gactcgcctg gatcgcatgc cagagatcgc gcaggaagaa
     3541 atcatcggcg tgcagggcat ccagcacccg gtcgtagcgg cgcaggtggg cgtagtcgtc
     3601 ggtatcgttg aacgacacga acatgagc
//
LOCUS       DATIFF010000528         4191 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_529486, whole genome shotgun sequence.
ACCESSION   DATIFF010000528 DATIFF010000000
VERSION     DATIFF010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4191
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_529486"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            135..1868
                     /locus_tag="VLD58_07860"
     CDS             135..1868
                     /locus_tag="VLD58_07860"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HSB54256.1"
                     /translation="MSSLTELHAALLQAMITAGLAVLCALLYRRYRKPYFFWWAVAWA
                     LYLGRMAAIFTFLAIRDPFWLFAHQVATGWTALALLWGALVFSRGARFRSIYLLAVLF
                     PPLWSAYAIYHFQERGGFMLAAVPAVAFLSGATLWTAGVFFRFRRQTGSSGATLLGFS
                     FLLWGLHHLDYPILRAQGAWNPWGYYLDILFLLSVGVGIVTLVIEDFERGLGAMAALS
                     GELQRGLSTPDAPNAVLGRALLLPGVRGSALYDRASDRFYRGVGACEGWRDQPPTPET
                     SPLIKEAVDHNRPLSSSAPPAFAFVAVLPVEREQKVVGALVLVGDARDPFTALDVSFL
                     HALGQQVGAALENAELNRRLRRRSEDLEQLSARMLRQQEEERRRISLELHDETAQVFS
                     AVKLQLGIVREEVPAPQAERLGRVLDLVDEGMASIRSVTMALRPSLLDDLGLLPAIRA
                     LIADFETRTGITTVIRGVESLPPLSEDAELALFRGVQEGLSNVARHADASGVTIEISH
                     DAHCVAVTLEDNGGGIETREGAVQLEEGTGLAGMRERFTAQGGRVSLAPAPGGGLQLR
                     MWLPTGNGTGR"
     gene            1865..2536
                     /locus_tag="VLD58_07865"
     CDS             1865..2536
                     /locus_tag="VLD58_07865"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSB54257.1"
                     /translation="MTETRVRVMLVDDHTLVREGIRHVLTATPGVEVVAEAGEAGEAL
                     RLAAESRPDIVVQDLSLPGASGLDLTTRLKELLPSVKVMILSVHDHPEYVLGAVRAGA
                     QGYLRKDTSPAELRSALQAVARGESYFSPPVARHLTAAVRGESLPEDPAGRLARLTPR
                     EREVLAGIAAGETSRAIAGRLGLSPRTVETYRESLARKLDIKTVAALTRFALEAGLVR
                     AESEG"
     gene            2824..>4191
                     /locus_tag="VLD58_07870"
     CDS             2824..>4191
                     /locus_tag="VLD58_07870"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HSB54258.1"
                     /translation="MSSFRRAVLAVAILVPVRLSAQAQQGQKRDSVVELPPMTVTATR
                     DLREVYKTPTPVSVVDSTTIARRAPANVTDLFLDLPGLDVNGIGPTQSRPVIRGLLGQ
                     RILLLEDGIRLNNSRRQQDFGEIPSVAALEALGRVEVVRGPASVLYGTDAIGGAVNLI
                     TRQPATSLAGTTVRGAMGYRYQSAGNQQRPWGLASGTAGRFNWLAFGSYLDAGTYKAP
                     AGSFGGLTLAKDTKVNGSGVTDNNIAFQAGYALSENQQVSARYERYSAFDQGFGYVAN
                     SDVQPLDPNSPTINITYPTQYVDKISGTYSGKGLGLPFADRLDVTTYYMTNNRALDLN
                     IFIPFGPGTPPGAGLIAVTNNYTSLATYGARIEAAKAIAGRHLLTYGLDGFRDRSFNQ
                     DHQVQTIVGFGPPSEVLNSNVPQVPNATFRSLGAFAQMDLHPTQRFNVIAGARVQDIK
                     ADTRKT"
BASE COUNT          647 a         1502 c         1371 g          671 t
ORIGIN      
        1 cggcggggaa tgcgcttgag ttcaagacgt tccgggatat gggaaggatc ttcgccaagt
       61 gagaagtgag aagtaagaag ggagaagcag gaccccttct cacttctcac ttctcccttc
      121 tccctcccga ccccatgtcc tccctcaccg agctgcacgc cgccctcctc caggccatga
      181 tcaccgccgg cctcgcggtg ctctgtgccc tgctctaccg ccgctaccgc aagccctact
      241 tcttctggtg ggcagtggcg tgggcgctgt atctcggccg catggcggcg atcttcacct
      301 tcctcgccat ccgcgacccc ttctggctct tcgcgcatca ggtcgccacc ggctggaccg
      361 ccctggcact cctctgggga gccctggtct tctcccgggg cgcgcgtttc cgctccatct
      421 atctcctggc ggtgctcttc ccaccgctct ggtccgccta cgccatctat cacttccagg
      481 agcgcggcgg cttcatgctc gcggcggttc ccgcggtcgc cttcctgagc ggcgccaccc
      541 tgtggaccgc gggcgtgttc ttccgcttcc gccgccagac cgggtcgtcc ggcgccacgc
      601 tcctcggctt ctcgttcctg ctctggggtc ttcaccacct cgactatccc atcctccggg
      661 cccagggcgc ctggaatccg tggggctact atctcgacat tctcttcctg ctgtcggtcg
      721 gcgtcggcat cgtgacgctg gtgatcgagg atttcgagcg gggtctcggc gccatggcgg
      781 cgctctcggg tgagctgcag cgcggactct ccacccccga cgcacccaac gccgtcctgg
      841 ggcgcgcgct gctgctgccg ggcgtgcgcg gcagcgccct ctacgaccgc gcaagtgacc
      901 ggttctaccg cggcgtcggc gcctgcgaag ggtggcgcga tcagccaccc acgccggaga
      961 cctcgccgct catcaaggaa gcggtcgacc acaatcggcc cctctcgtcc agcgcgcccc
     1021 ccgcgttcgc ctttgtcgcg gtcctcccgg tcgagcggga acagaaggtc gtgggcgccc
     1081 tggtgctggt gggcgatgcc cgcgatccct tcaccgcgct cgacgtctcc ttcctgcacg
     1141 cgctggggca gcaggtgggc gccgcgctcg agaatgccga gctcaaccgg agactccgcc
     1201 gccggagcga ggacctcgag caactctcgg ccaggatgct gcgccagcag gaagaggaac
     1261 gccgccggat ctcgctcgag ctccatgacg aaaccgccca ggtgttctcg gcggtcaagc
     1321 tccagctcgg catcgtccgc gaggaagtcc cggcgccgca ggcggaacgg ctgggccggg
     1381 tgctcgacct ggtcgacgaa gggatggcga gcatccgcag cgtgacgatg gcgctccggc
     1441 cttcgctgct cgatgacctg gggctcctcc ccgcgatccg cgcgctcatc gccgacttcg
     1501 agacccgcac cggcatcacc accgtgatcc gcggggtcga gtcgctgccg cccctcagcg
     1561 aggatgccga gctggccctg ttccgcgggg tgcaggaggg actgtcgaac gtggcccgcc
     1621 acgccgacgc cagcggggtt actatcgaga tcagtcacga cgcgcactgt gtggccgtga
     1681 cgctggagga caacggtggc gggatcgaaa cccgcgaggg cgcggtgcag ctggaagagg
     1741 gcaccggact cgccgggatg cgggagcggt tcaccgcgca gggcggccgg gtgtcgctgg
     1801 cccccgcgcc gggtggcgga ctccagctcc gcatgtggct cccgacagga aacggaaccg
     1861 gacgatgacc gagacgcggg tgcgggtgat gctggtggac gaccatacgc tggtgcgcga
     1921 aggcatccgg catgtgctga ccgcaacccc cggcgtcgag gtggtcgccg aggccggcga
     1981 agcgggcgag gcgctccggc tcgcggccga gagccgtcca gatatcgtgg tgcaggacct
     2041 gtcgctcccg ggcgcgagcg ggctcgacct caccacccgg ctcaaggaac tgctcccctc
     2101 ggtgaaggtg atgatcctga gcgtgcacga tcacccggaa tacgtcctcg gcgcggtgcg
     2161 cgcgggggcc cagggatacc tgcggaagga cacctcaccg gccgagctcc gctcggcgct
     2221 gcaggcggtg gcgcggggcg agtcgtattt cagcccgccg gtcgcgcggc acctcaccgc
     2281 cgcggtccgg ggcgagagcc tgcctgaaga ccccgccggc cggctggccc ggctgacgcc
     2341 gagggagcgt gaagtgctgg cggggatcgc ggcgggagaa accagccggg ccatcgccgg
     2401 ccggttggga ctctctcccc gcacggtgga gacctatcgc gagagcctgg cgcgcaagct
     2461 cgacatcaag accgtcgccg cgctcacccg cttcgcgctc gaagccggcc tggtccgggc
     2521 cgagagcgaa ggatgattcg cggagccatc cggctccgcg accctgcccc tgcctcgctt
     2581 ccttcttcgc ccgtcgggcg caagtgcgaa ggactcctca tgaatgtgtg aaagtgtgct
     2641 cagactggtg ggcagccgtt atcggctaac cagctgaaat cattcgactt ccaaaatctc
     2701 acccgtagat gtacggacca cgccttggtg gctttcccga atgtccggtt cggccttgag
     2761 gggctagcat agtcgcgcga tacgcgcccc cgagaccccc tcaaccgttg caggaagcct
     2821 ctcatgtcgt cgttccgtag agccgtgctc gccgtggcga tcctggttcc ggtccgcctg
     2881 tccgcccagg cccagcaggg tcagaagcgc gacagtgtgg tcgaactccc gcccatgact
     2941 gtgaccgcca ctcgcgatct ccgcgaggtg tacaagacgc cgacaccggt gagcgtggtc
     3001 gactcgacca ccatcgcccg gcgggccccg gccaacgtca ccgacctgtt cctggatctt
     3061 cccggcctgg atgtgaacgg catcggaccg acccagagcc gcccggtgat ccgcgggctg
     3121 ctgggccagc gaatcctgct gctggaggac gggatccggc tcaacaattc ccggcggcag
     3181 caggacttcg gcgagatccc ctcggtggcg gcgctcgaag ctctgggccg ggtggaggtg
     3241 gtgcggggac cggcatcggt gctctacgga accgacgcga tcggcggcgc ggtcaacctg
     3301 atcacccgtc agcccgcgac ctcgctcgcc ggcaccacgg tgcgcggcgc gatgggctac
     3361 cgctaccaga gcgccgggaa tcagcagcgt ccctggggcc tggcgtcggg caccgcggga
     3421 cggttcaact ggctcgcctt cggctcctac ctcgacgccg gcacctacaa ggcgccggcg
     3481 ggaagcttcg ggggactcac gctggcgaag gacaccaagg tgaacggcag cggcgtcacc
     3541 gacaacaaca tcgctttcca ggcgggatac gcgctgagcg agaaccagca ggtctcggcc
     3601 cgctatgagc gctacagcgc gttcgaccag ggcttcggct acgtcgccaa cagcgatgtg
     3661 cagccgctcg acccgaactc gccgaccatc aacatcacct acccgacgca gtacgtcgac
     3721 aagatcagcg gcacctactc gggcaaggga ctgggtctcc ccttcgcgga ccggctggac
     3781 gtcacgacct actacatgac gaacaaccgg gccctcgacc tcaacatctt catcccgttc
     3841 ggcccgggaa cgcctccggg ggcggggctc atcgccgtca ccaacaacta cacctcgctc
     3901 gccacctacg gggcccgcat cgaggcggcc aaggcgatcg cgggacggca cctgctgacc
     3961 tacggtctcg acggcttccg cgaccggtcg ttcaaccagg accatcaggt tcagaccatc
     4021 gtcggcttcg ggccgccgag cgaagtgctc aattccaatg tcccgcaggt gcccaacgct
     4081 accttccgga gcctcggcgc ctttgcccag atggacctgc acccgaccca gcggttcaac
     4141 gtgatcgccg gcgcccgggt ccaggacatc aaggcggaca cccggaagac g
//
LOCUS       DATIFF010000529         1799 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1606078, whole genome shotgun sequence.
ACCESSION   DATIFF010000529 DATIFF010000000
VERSION     DATIFF010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1799)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1799)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1799
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1606078"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VLD58_07875"
     CDS             <1..180
                     /locus_tag="VLD58_07875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54259.1"
                     /translation="FDPGNRTSFRLSLPGGTRDFPAIQVRDLVIWGLTERILQQVAEL
                     AGVRNAEEGTGTANA"
     gene            297..1721
                     /locus_tag="VLD58_07880"
     CDS             297..1721
                     /locus_tag="VLD58_07880"
                     /inference="COORDINATES: protein motif:HMM:NF001923.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HSB54260.1"
                     /translation="MSTPPGGGVDEAPDARAPHPSGQPVSLEGLHGSVAVPPSGSGFW
                     TQWKAFVGPALLVSVGYMDPGNWGTDLAAGAQFKYALLWVVALSSLMAVVLQVTSARL
                     GIVTGRDLAQCCRDWYPRWTRIPLWLLAELAIGACDLAEVLGSAVALNLLFHIPLIWA
                     VLITAGDVLLLLALQRVGMRFIESVVLVLVGTIALCYGIEIFVLPRVAPSLGEMGRAM
                     LHPSLATPGMAYLAIGIIGATVMPHNLYLHSALVQSRHLRQDERSVRTALRFNTIDAV
                     TALSLAFLVNAAIVVLAATVFHGHDRVAVAGGGVVEFGADADWIRVAYLTLAPLLGTA
                     AASLLFVVALLASGQSSTITGTLAGQVVMEGFMRWRLAPWARRMLTRLLAILPAVVVV
                     GVRGEGSVTDLLTLSQVVLALQLPFAMVPLLTFTSSRKRMGRWRSGWPLMAAGWASAV
                     VIIGMDFYGLPDSLRSAWLVLVGR"
BASE COUNT          238 a          604 c          634 g          323 t
ORIGIN      
        1 ttcgaccccg gcaatcgtac ctccttccgc ctctcgctcc ccggcggcac gcgcgacttc
       61 ccagccatcc aggtcaggga cctcgtcata tggggcctga ccgaacggat actccagcag
      121 gtagcggagc tggctggagt ccggaatgca gaggaaggca ccggtaccgc aaacgcttga
      181 cagacaacgc ggtatgtcaa tagtttcgtg tcagtgaaat caacatttcg taaactaatt
      241 gatagatatt acccgtcgcc gaaagtacct cgacctcggc gcgggcggaa ggtggagtga
      301 gcacccctcc gggcggcggc gtcgacgagg cgcccgacgc cagggcgccg cacccctccg
      361 gccagcccgt ctctctggag ggactgcacg gcagcgtcgc ggtaccgccg agcgggtcgg
      421 gtttctggac gcagtggaag gcgttcgtcg ggcctgcgct cctggtgagc gtggggtaca
      481 tggacccggg caactggggg accgacctcg cggccggggc gcagttcaag tacgccctcc
      541 tctgggtcgt cgccctgtcg agcctgatgg ccgtggtgct gcaggtgacg tccgcccggc
      601 tcgggatcgt caccggccgc gacctggcgc agtgctgccg cgactggtac ccgcggtgga
      661 cgcgcattcc gctgtggctc ctggccgagc tggcgatcgg cgcctgcgac ctcgccgagg
      721 tcctcgggag cgcggtcgcc ttgaacctcc tgttccacat cccgctgatc tgggcggtgc
      781 tcatcacggc gggggacgtc ctgttgctgc tggcgctgca acgggtcggc atgcggttca
      841 tcgagtcggt ggtgctggtc ctggtgggga ccatcgccct ctgctacggc atcgagatct
      901 tcgtcctgcc gagggtggcc ccgagcctcg gggagatggg ccgggcgatg ctgcacccca
      961 gtctggcgac gccggggatg gcgtacctgg cgatcggcat catcggcgcc accgtgatgc
     1021 cgcacaatct ctacctgcac tccgcgctgg tgcagagccg tcacctgcgc caggacgagc
     1081 gctcggtccg gaccgcgctg cgcttcaaca ccatcgacgc cgtcaccgcc ctctcgctcg
     1141 ccttcctcgt caacgccgcg atcgtggtgc tggccgcgac cgtcttccac ggccacgacc
     1201 gggtggcggt cgccggtggc ggggtggtcg agttcggtgc ggacgccgac tggatccggg
     1261 tcgcgtacct gactctcgcg ccgttgctcg gcacggcggc ggcgtccctg ctgttcgtgg
     1321 tcgccttgct ggcgagcgga cagagcagca cgattaccgg cacgctggcg ggccaggtcg
     1381 tgatggaggg gttcatgcgc tggcgcctgg ctccctgggc ccggcggatg ctcacccggc
     1441 tcctggcgat cctgccggcg gtggtcgtgg tcggggtccg gggcgaaggc agcgtgaccg
     1501 acctcctcac actcagtcag gtggtgctcg ccctccagct gcccttcgcg atggtcccgt
     1561 tgctgacgtt caccagctcg cggaagcgga tggggcggtg gcgaagcggc tggccgctga
     1621 tggcggccgg ctgggccagc gccgtcgtga tcatcgggat ggacttctat gggctgcccg
     1681 actcgctgcg gtcggcgtgg ctcgtcctcg tgggccggta ggttcggcgc cggagtcgcc
     1741 atgtacgaca ggatcctgct tccgctcgat ggctcccatg ccgaccggac gatcatcga
//
LOCUS       DATIFF010000530         1570 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_529619, whole genome shotgun sequence.
ACCESSION   DATIFF010000530 DATIFF010000000
VERSION     DATIFF010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_529619"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..419)
                     /locus_tag="VLD58_07885"
     CDS             complement(<1..419)
                     /locus_tag="VLD58_07885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54261.1"
                     /translation="MSRCQTGYFATAIAGLLALGAGSPAPAYAGPHDAGPSRPVLAGT
                     YGSAVDIPPGTTIPVTLDEDIPVKREQFGKTFPAHVTRDVTVNGNVALPEGTPAQVEL
                     VPSSEKSDNVSLRLVEVRVGGETEKVKTGDARPDTER"
     gene            complement(626..1291)
                     /locus_tag="VLD58_07890"
     CDS             complement(626..1291)
                     /locus_tag="VLD58_07890"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSB54262.1"
                     /translation="MAGSRWDPSQPDRRTGLRAEYRRTAPARLDVAGQACAVRDVSTN
                     GLRVEPAPPGRAWYPGQAVSGVLYLRTSPPMPVAGWVLRVGFAGLVVVPDESGAWPSR
                     AVIEAERRDLQRSQRDRRREPRISLPLFRPSGTAPSPLRDVSATGLRYLLPRGERVPA
                     AGSAVEGEVRLDPGIVIPIRGRVVRHTGREIALALDPPGLGPEALALLQRRFSAASSE
                     PSA"
BASE COUNT          235 a          560 c          532 g          243 t
ORIGIN      
        1 ctccgctcgg tgtccgggcg cgcatcgccg gtcttcactt tctccgtctc tccaccgacc
       61 cgcacctcca ccaatcgcag gctgacgttg tcgctcttct cggagctcgg aaccagctcg
      121 acctgggccg gcgtgccctc ggggagagcg acgttgccgt tgacggtgac atcgcgggtg
      181 acgtgcgccg ggaaggtctt gccgaactgc tcccgcttga cggggatgtc ctcgtccaat
      241 gtgaccggga tggtggttcc cggcggaata tcgacagcac tcccgtaggt tccagcaagc
      301 accgggcggc tcgggccggc atcgtggggg cctgcgtacg cgggagccgg cgagcctgca
      361 ccaagcgcca gaagcccggc gatcgccgtc gcgaagtatc cggtctgaca tcgagacata
      421 tgaacctcct ttgcggagcc ggtggcgccc acggtagctc tagtgtcggc atcgtggcac
      481 gagcggcaat gagccctcac caccattggc ttccacggtc gggcccgcgc gcgcgaaagt
      541 ctaccccgga gcaccccgcc agagcgtgct ccaggtcacc gcctcgccac ggtactgcga
      601 ctcctggaga taccgccttc ccgcttcagg ccgatggctc cgatgacgcg gccgagaacc
      661 ggcgttgcag gagcgccagc gcttcgggcc ccagacccgg agggtcgagg gccagcgcaa
      721 tctcacggcc tgtgtgccgc acgacccgac cccgaatcgg aatcacaatc ccaggatcga
      781 ggcgtacctc gccctccacg gcgctgcccg cggccggcac ccgctcgccg cgcggcagca
      841 gataccggag ccctgtggca ctgacgtccc gaagcgggct cggggcggtg ccgctcggcc
      901 ggaacagcgg cagcgagata cgcggctcgc gccggcggtc ccgctggctc cgctggagat
      961 cccggcgctc ggcctcgatg accgcccgac tcggccatgc tccgctttca tcgggcacga
     1021 ccaccagccc cgcaaagccc acccggagga cccatcccgc gaccggcatc ggcgggctgg
     1081 tcctcaagta cagcacgccg gacaccgcct ggccgggata ccaggcccgg ccaggcggcg
     1141 cgggctctac ccgcagcccg ttcgtgctca cgtcccgcac agcgcaggcc tggcctgcga
     1201 catcgaggcg ggcgggagcc gtccggcggt actctgcccg cagtccggtc cggcggtcgg
     1261 gttgcgacgg gtcccagcgg cttccggcca tcggcctcag gttgggagcg ggtgttgcgg
     1321 agtggcagcc ctcgggtgcg gatgtatggc ctgccgagcc tccgccatgc ggtgaccgcc
     1381 gttacgggtc gggctgtgtg gagattcgcg ccggcttcac cgaatcttca cctgtgcgga
     1441 cctaagatgc gtgcggtcgc cacgatgccg cgcgttcgaa tcgggattac ccggactcgg
     1501 gaggtatggg tatgagcatc ttcggaaggc tgatgtccaa gatcttcggc caggaggaga
     1561 aagccgcggc
//
LOCUS       DATIFF010000531         1716 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1914893, whole genome shotgun sequence.
ACCESSION   DATIFF010000531 DATIFF010000000
VERSION     DATIFF010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1716
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1914893"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(47..1000)
                     /locus_tag="VLD58_07895"
     CDS             complement(47..1000)
                     /locus_tag="VLD58_07895"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSB54263.1"
                     /translation="MTLPAETLDVSVLVPAKDEAANLPEFVRQCHEALGPAGFSFEVI
                     VVDDGSRDDTPRVLRELERRYPFLRVVTHRRQRGIADALRSAGDVARGDVFVFYPADL
                     QYLPADIPALVAPVLAGRADIVTGTKQGRYEKAFVSRVYNVLCRWLFGVRVTDLNSVK
                     AYRREVMLNVPLRPDWHRYMVVIAAADGFRLDSLPVPLYPRTAGVSKFGWKRIPVGVL
                     DLVSVWFQLRFGRKPMLFFGVAGVTLFVIGLIAGVAALVLRFGYGIGLRPLLNLVETM
                     VISGIVLFGFGLLGEMIAGLQEETRVIARGLDRLDKPDLRD"
     gene            complement(997..>1716)
                     /gene="rpoN"
                     /locus_tag="VLD58_07900"
     CDS             complement(997..>1716)
                     /gene="rpoN"
                     /locus_tag="VLD58_07900"
                     /inference="COORDINATES: protein motif:HMM:TIGR02395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HSB54264.1"
                     /translation="GMDPAQVQAAADNIAKLDPKPGLRFSGGGDDYIVPDLVVEKIDG
                     EYRVFLNDTNLPRLRLSRVYQEIARDRKKFVGENRDFITQRLNSAQWMIQAIEQRRQT
                     MLKVMNFIVDRQRDFFEKGIEFLKPLTLREVAEVINMHESTVSRVTNEKYVQTPRGVL
                     PLKFFFSSALATASGEEASARSIRAKLQKMVGEEDSAKPLTDQQIVHLFQEQGIQIAR
                     RTVAKYRDQLGILPARMRKRV"
BASE COUNT          288 a          575 c          591 g          262 t
ORIGIN      
        1 cgggccaccg gggaaaattg tgggtcagga agacgacccg caccgatcag tcccgcaggt
       61 cgggcttgtc cagtcggtcg agcccgcggg cgatcacccg cgtctcctcc tgcagacccg
      121 cgatcatctc gccgagcagg ccgaagccga acagcacgat gccgctgatc accatggtct
      181 cgacgagatt gagcagcggc cggaggccga tgccataccc gaagcggagc accagggcgg
      241 caacgcccgc gattagaccg atcacgaaca aggtgacccc ggccacgccg aagaacagca
      301 tcggcttccg gccgaaccgg agctggaacc agaccgagac cagatcgagc acccccaccg
      361 ggatccgctt ccagccgaac ttcgagaccc cggccgtgcg ggggtacagg ggcaccggca
      421 gcgaatcgag ccggaagccg tcggccgcgg cgatcaccac catgtagcga tgccagtcgg
      481 gccggagcgg gacgttcagc atcacctcgc gccggtaggc cttgaccgag ttgaggtccg
      541 tcacccgcac gccgaagagc cagcgacaca gcacgttgta cacccgggag acgaacgcct
      601 tttcgtagcg gccctgcttg gtgccggtga cgatgtccgc ccggcccgcg aggaccggcg
      661 cgaccagcgc ggggatgtcg gccgggagat actgcagatc ggcgggatag aagacgaaga
      721 cgtcgccccg agccacgtca ccggcggagc ggagcgcgtc ggcgatcccg cgctggcggc
      781 ggtgggtcac cacccggaga aaggggtagc gccgctccag ctcgcggagg acgcgcgggg
      841 tgtcgtcgcg ggagccatcg tccacgacga tgacttcgaa ggaaaacccg gccgggccga
      901 gcgcctcgtg gcattgccgg acgaactcgg gcaggttggc cgcttcgtcc ttcgccggga
      961 cgaggacgct cacgtccagc gtctcggcgg gcagggtcat acccgcttcc gcatccgggc
     1021 cggcaggatg ccgagctggt cgcggtactt ggcgaccgtg cgtcgggcga tctggatccc
     1081 ctgctcctga aagagatgca cgatctgctg gtcggtgagc ggcttcgcgc tgtcctcctc
     1141 gcccaccatc ttctgcagct tggcccggat cgagcgggcg ctggcctcct cccccgacgc
     1201 ggtggccagg gcgctggaga agaagaactt gagcggcagc accccgcggg gggtctgcac
     1261 gtacttctcg ttggtcaccc ggctgacggt ggactcgtgc atgttgatga cttcggccac
     1321 ctcgcgcagg gtcagcggct tgaggaactc gatccccttc tcgaagaagt cgcgctgccg
     1381 gtccacgatg aagttcatca ccttgagcat ggtctggcgg cgctgctcga tggcctggat
     1441 catccactgc gcgctgttca gccgctgggt gatgaagtcg cggttctcgc cgacgaactt
     1501 cttgcggtcg cgcgcgatct cctggtacac gcgggagagg cgcaggcgcg gcaggttggt
     1561 gtcgttgagg aacacccggt actccccgtc gatcttctcc acgacgaggt ccggcacgat
     1621 gtagtcgtcg ccgccgccgc tgaagcgcag cccgggcttg gggtcgagct tggcgatgtt
     1681 gtcggccgcc gcctgcacct gcgcggggtc catccc
//
LOCUS       DATIFF010000532         1077 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_836991, whole genome shotgun sequence.
ACCESSION   DATIFF010000532 DATIFF010000000
VERSION     DATIFF010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_836991"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(161..>1077)
                     /locus_tag="VLD58_07905"
     CDS             complement(161..>1077)
                     /locus_tag="VLD58_07905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54265.1"
                     /translation="PDGERLAYSVVTNRSNIWREKEPVTGAVSSRAAELVTTDQESIE
                     SFWISRDREWLVFDSDRSGTQQIFRRRLAGGEVQQITHGVSPAFSVSLSPDGKQVGYH
                     SIVNGLRRVFVASSEGGDQPVQVSPGQFQDERNPQWSPDGERLAWSAIQDGVSRAQVV
                     TRAARGWSAPREVASPGAAVGSTWGDTARLLAIDTVNLRLIGVSTDSSSSPPRVLFQA
                     TAATPKGLAAPVASTDFRMLYFANRQGIWVMPIKGGALRELVRFDDPLHPHATNARSV
                     SGSAGFVYFTLQSPQSNIWIARVTGLTR"
BASE COUNT          172 a          389 c          354 g          162 t
ORIGIN      
        1 atcaccgcgg ccagttccgg ccggaggacc ttgatcgcga ccttgcggtc gtgcttgagg
       61 tcctgggcga ggtacaccgt cgccatccca cccgcgccca gttcccgctc gatgcggtag
      121 cggtcggcca gggcggcggt gaggcgggga gcgacgtcgc tcatcgcgtg agccccgtca
      181 cccgcgcgat ccagatgttg ctctgcggac tctgcagcgt gaagtatacg aacccggcag
      241 aacccgacac gctccgggca ttcgtcgcgt gcgggtgcag tgggtcatcg aaccggacca
      301 actcgcggag cgcgccgccc ttgatcggca tgacccagat cccctggcga ttggcgaagt
      361 acagcatccg gaagtcggtc gaggcgacgg gagccgcgag ccccttcggg gtggccgcgg
      421 tagcctggaa caggacccgt ggcgggctgc tgctgctgtc cgtgctgact ccgatcaggc
      481 ggaggttcac ggtgtcgatc gccagcaacc gagcggtatc accccaggtc gagcctaccg
      541 ccgcgcccgg gctggccacc tcgcgcggcg cgctccaccc gcgggccgcc cgagtgacca
      601 cctgcgcgcg cgacacccca tcctggatcg cggaccacgc caggcgctcg ccgtcgggag
      661 accactgggg attgcgctca tcctggaatt ggcccggcga cacctgcacc ggctggtcgc
      721 ccccttcgct cgaggccacg aacacgcgcc gcaaaccgtt gacgatggag tggtagccca
      781 cctgcttccc gtcgggcgac agcgacaccg aaaacgccgg tgaaacgcca tgggtgatct
      841 gctgcacctc accgcccgcc agccgccggc gaaagatctg ctgcgtcccc gaccggtcgg
      901 agtcgaacac caaccactcc cggtcccggg atatccagaa gctctcgatg ctctcctggt
      961 cggtggtgac cagctcagcg gcgcggctcg acacagcccc ggtgacaggc tccttctccc
     1021 gccagatgtt gctgcgattg gtcacgaccg aataggccag gcgctcgccg tcgggag
//
LOCUS       DATIFF010000533         3717 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_375994, whole genome shotgun sequence.
ACCESSION   DATIFF010000533 DATIFF010000000
VERSION     DATIFF010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3717
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_375994"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            174..989
                     /locus_tag="VLD58_07910"
     CDS             174..989
                     /locus_tag="VLD58_07910"
                     /inference="COORDINATES: protein motif:HMM:NF042696.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSB54266.1"
                     /translation="MNPTPLEYVEHHPVGPLGTRVRCIWALRAPTDPASRFEPVFPDG
                     CMEVVFNLAAQFERLGPDRAERQASELLVGQLLEAIRLRPTGRIDILGVRFQPWGLKG
                     SGWISPEEVAGRTVPVADLGGPLRGTVSERLSEIPDLRRRCLAMERILTGSPFTSGDL
                     SPPPALVSLARGTLRSVSGAAAAAGVSTRQIERLSAQWTGLSPRELIHLVRFQRALAR
                     LRRFPEQSLARIAHESGFADHAHFTRDFSRFAGVTPSLFRASIAPMTAAFIPE"
     gene            1032..1610
                     /locus_tag="VLD58_07915"
     CDS             1032..1610
                     /locus_tag="VLD58_07915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HSB54267.1"
                     /translation="MPTRPQPSGLHPWHDIPTGREPPNVVNAIIEIPTNERNKFELDK
                     ELGIFRLDRVLHSAVHYPGDYGFLPQTLGDDGDPLDVLVLMTIPVFTGCLVECRPIGL
                     FHLIDRGKADEKVLAVPLGDPYSEGINELSDIPQHTLKEVEHFFQVYKDLEGVTTRTR
                     GFEGAAEARETISHAMGLYRKKFGKKAAKKRG"
     gene            complement(1611..2339)
                     /locus_tag="VLD58_07920"
     CDS             complement(1611..2339)
                     /locus_tag="VLD58_07920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54268.1"
                     /translation="MEGIRSAASFEGLAILAVIYFVLNLLGKAGKKQGRSTVPPPEPE
                     GQPVPGGTQQEGFSLESVLREIERVKSQAQQRQAEPSQVPAGPPSRRPKAPPPRSSEP
                     APRLEHPRAARVGRMEQVKQDARGPLGRRADLELPSAEEAEDRTSFDDMPARATPWRP
                     SEPASRVRAVVDQDEAAEGVVARRLREVEARNRPISAADHAAFDKSIRQGDGATTAPA
                     RFGADRIRQAFIWKEILGPPKSME"
     gene            complement(2341..3342)
                     /gene="floA"
                     /locus_tag="VLD58_07925"
     CDS             complement(2341..3342)
                     /gene="floA"
                     /locus_tag="VLD58_07925"
                     /inference="COORDINATES: protein motif:HMM:NF010186.0"
                     /note="flotillin-like protein involved in membrane lipid
                     rafts; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin-like protein FloA"
                     /protein_id="HSB54269.1"
                     /translation="MSDFAALGPGLIIALIFIGILALTIFFRFVPVGLWINALASGVH
                     VGFGTLFGMRLRKVNPGAIVGSLINAHKAGLSLATNDLEAHYLAGGSVERVIRALISA
                     DKAGIPLNFKQAAAIDLAGRDVFEAVQVSVNPKVITTPKVAAMAKNGIQLLAIARVTV
                     RANINRLVGGAGEETILARVGEGIVTAIGSAETHKNVLENPDMISKTVLAKGLDAGTA
                     FEILSIDIADVDVGKNIGAELQTDQAEADKRIAQAKAEERRALAVAMEQEFKAEAQKQ
                     RAQVIAAEAQVPLAIADAFRKGNLGVMDFQRYRNLQADTSMRQAIAGQGETSTGQSG"
     gene            complement(3396..>3717)
                     /locus_tag="VLD58_07930"
     CDS             complement(3396..>3717)
                     /locus_tag="VLD58_07930"
                     /inference="COORDINATES: protein motif:HMM:NF014062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HSB54270.1"
                     /translation="LGASVFITLAVAFAWFRHLPNSRRFRGLIHQEAALSAEGYVSAL
                     PRGDLIGKAGVAATDLRPAGTAVVDGERIDVVTEGDYISSGARVEVVRAEGYRHVVRP
                     KQDA"
BASE COUNT          568 a         1320 c         1205 g          624 t
ORIGIN      
        1 gccccgcgtc atctgccagc acccggccag ccactcgagg ggttccgaac gatcgcccgg
       61 gccggcaacg gacaacggca ggagcgccac cagcgccaga gacctcttcc gcatgctctc
      121 taccttggta gggtgcagga cattctagcc ggcctcatca cccgcgcgct tgcatgaacc
      181 cgacaccgct cgaatacgtc gagcaccatc ccgtcggacc gctcggcacc cgggttcggt
      241 gcatctgggc gctccgcgcg ccgaccgatc ctgccagccg gttcgagccg gtctttcccg
      301 acggatgcat ggaggtggtg ttcaacctgg cggcgcagtt cgagcggctc ggcccggacc
      361 gggctgagcg ccaggcgtcc gaactcctcg tgggacaact cctcgaggcg atccggctcc
      421 gcccgactgg ccggatcgac atcctcggcg ttcggttcca accttggggt ctgaaaggct
      481 cgggatggat aagcccggag gaggtcgccg gccggacggt tcccgtggcc gatctcggtg
      541 ggccgctcag gggcacggtt tcggagaggc tctcggagat acccgacctg cggcggcgct
      601 gccttgccat ggagcggatc ctgaccgggt cgcctttcac gagcggtgac ttatccccgc
      661 caccggccct cgtctcgctg gctcggggga cgctccgctc ggtatcaggt gcggcggcag
      721 ccgccggggt ttcgacccgc cagatcgagc ggctgagtgc gcaatggact ggtctctcac
      781 cgcgcgagct gatccatctg gtccggttcc agcgggcgct ggcccggcta cgccgctttc
      841 cggagcagtc cctggcccgg atcgcccatg agagcggatt cgcggatcac gcccacttca
      901 cccgcgactt ctcccgtttc gctggagtca ccccgtcgct cttccgggcc tcgatcgccc
      961 caatgaccgc ggcgttcatc ccggagtaaa tggacgctcc cgctcacgca aaggccgact
     1021 aactttgcac catgcccacc cgaccccagc cctccgggct gcatccctgg cacgacatcc
     1081 ccactggccg cgagccaccc aacgtggtga acgcgatcat cgagatcccc accaacgagc
     1141 ggaacaagtt cgagctcgac aaggagctcg gcatcttccg gctcgaccgg gtgctgcaca
     1201 gcgcggtgca ctaccctggt gactacggct tcctgccgca gaccctgggc gacgacggcg
     1261 atccgctcga cgtgctggtg ctcatgacca tcccggtctt caccgggtgc ctggtcgagt
     1321 gccgtccgat cggcctcttc cacctgatcg atcgaggcaa ggccgacgag aaggtcctcg
     1381 ccgtaccgct gggcgacccc tattccgagg ggatcaacga actctcggac atcccgcagc
     1441 acaccctgaa ggaggtcgag cacttcttcc aggtgtacaa ggatctcgag ggggtaacga
     1501 cgaggacgcg cggcttcgag ggcgcagcgg aggcgcggga gacgatcagc cacgcgatgg
     1561 gattgtaccg gaagaaattc ggaaagaagg ccgcgaagaa gcgcggctag ctactccatc
     1621 gatttcggcg gccccagaat ctccttccag atgaacgcct gccggatccg atcggcgccg
     1681 aagcgtgcgg gtgccgtcgt ggcgccgtcg ccctgacgga tgctcttgtc gaaggccgcg
     1741 tgatccgccg cgctgatggg ccggttgcgc gcctcgacct cacgcaggcg ccgagccacc
     1801 actccctccg cggcttcatc ctgatccacc accgcgcgca cgcgcgacgc cggctccgac
     1861 gggcgccacg gcgtggcccg cgccggcatg tcgtcgaatg aagtacggtc ctcagcctcc
     1921 tcggccgagg gcagctcgag gtccgcgcgc cgcccgaggg gcccgcgtgc gtcctgcttc
     1981 acctgctcca tccggcccac ccgcgccgcg cgcgggtgct cgagcctcgg agctggctcc
     2041 gagctcctgg gtggtggggc cttcggccga cggctgggcg gcccggcggg cacctggctc
     2101 ggctccgcct gacgctgctg ggcctggctc ttcacccgct cgatctcgcg cagcaccgat
     2161 tccagggaaa acccttcctg ctgggttccg cccgggaccg gctggccctc gggctcgggc
     2221 ggcggcaccg tagagcgtcc ctgcttcttg ccggctttgc cgagaaggtt gaggacgaag
     2281 tagatcaccg cgaggatcgc cagcccctcg aagctcgcgg ccgaccgaat gccttccatc
     2341 tcagccactt tgaccggtcg aggtctcgcc ctggcccgca atcgcctggc gcatgctggt
     2401 atcggcctgg aggttgcgat agcgctggaa gtccatgacg ccgaggttcc ccttgcggaa
     2461 ggcgtcggcg atggccaggg gaacctgagc ctcggctgcg atcacctggg cccgctgctt
     2521 ctgggcctcg gccttgaact cctgctccat ggcaacggcc agggcccgcc gctcctcggc
     2581 cttggcctgg gcaatccgct tgtcggcctc cgcctggtcg gtctggagct cggccccgat
     2641 gttcttccct acatccacat cggcgatatc gatcgagagg atctcgaagg cggttccggc
     2701 gtcgagcccc ttggccagca ccgtcttgga gatcatgtcc ggattctcca gcacgttctt
     2761 gtgggtctcg gccgagccga tcgcggtcac gatgccttca cccacgcggg ccagaatcgt
     2821 ctcctcgccg gcgccgccca ccagccggtt gatgttggcc cggacggtga cgcgggcaat
     2881 cgcgaggagc tggatgccgt tcttcgccat ggcggcgacc ttgggcgtgg tgatgacctt
     2941 cgggttgacg ctcacctgca ctgcctcgaa gacatcccgt ccggccaggt caatggccgc
     3001 cgcctgcttg aagttgaggg ggatgcctgc cttgtcggcg gagatcagcg cccggatcac
     3061 ccgttcgacg cttccacccg cgaggtagtg cgcctcgagg tcgttggtgg cgagcgagag
     3121 gccggccttg tgggcgttga tcagcgagcc gacaatcgcc cccggattca ccttcctgag
     3181 ccgcatgccg aacagggtgc cgaagcctac gtgcaccccg gaagccagcg cgttgatcca
     3241 gagcccgacc ggaacgaacc ggaagaagat ggtcagggca aggatgccga tgaagatcag
     3301 ggcgatgatg agccccggac ccagcgcagc gaagtcgctc acgtgtgtga ttctccagag
     3361 tgggaatgct gtgacggatg gcgctgcacc tgcacctacg cgtcctgctt cggccgcacc
     3421 acgtggcgat agccctcggc ccgcaccact tctacccgcg cgccactgga gatgtagtcg
     3481 ccctcggtga ctacgtcgat ccgctcgccg tccaccaccg ccgtgccggc gggccggagg
     3541 tcggtcgccg ccacaccggc cttgccgatc aggtcgcccc gcggcagggc agagacgtag
     3601 ccctccgcgc tcagtgcggc ttcctggtga atcaggccgc ggaaccgccg gctgttgggg
     3661 aggtgccgga accatgcgaa cgccactgcc agggtgatga acacactcgc gcccagc
//
LOCUS       DATIFF010000534         1553 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_69360, whole genome shotgun sequence.
ACCESSION   DATIFF010000534 DATIFF010000000
VERSION     DATIFF010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1553
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69360"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..469)
                     /locus_tag="VLD58_07935"
     CDS             complement(<1..469)
                     /locus_tag="VLD58_07935"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HSB54271.1"
                     /translation="MPALRGSAPDFRQHLEVETPEHVNLDLEIAGIGSRTLAAVLDTL
                     LLAGATVAVVIALGILAGYGFTLGRVGMVVLGLLGFLAWNGYFILFEGLRGGQTPGKR
                     ATGIRVLMDTGHAVTLGAAVVRNLLRWADFLPPPYLIGTLLVAFHPRAKRLGDL"
     gene            534..1310
                     /locus_tag="VLD58_07940"
     CDS             534..1310
                     /locus_tag="VLD58_07940"
                     /inference="COORDINATES: protein motif:HMM:NF021615.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphoryl diester phosphodiesterase
                     membrane domain-containing protein"
                     /protein_id="HSB54272.1"
                     /translation="MTPPTLRPLSVGEILDVSFTLYRRHFGALATVALVCTGLPLVLR
                     LFLEAGGGLFQNPALGLVYTIVFVTLNLVATAATVFIVSESYLGRPIAAREALNRSAP
                     YLSRILVCTLLLALVVFVGFLLLVIPGIILAVGLALAVPVVVLEPKTSASAALSRSWE
                     LTRGFRWRIFGLGITLLVILYVPVIAITGLFAIAMPGAAAGHFGPAIAATVIGLAVGG
                     LVQMFIYPLLYCVLTVTYYDLRVRKEAFDLEVLAAGLSRA"
     gene            1331..>1553
                     /locus_tag="VLD58_07945"
     CDS             1331..>1553
                     /locus_tag="VLD58_07945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54273.1"
                     /translation="MPTAPDSLRAVLDKVFADPAYEWVEPRNPLDFLLRWWRDFLRWL
                     SGLEQAQPLFYWALIWILTAILAAIVVHAV"
BASE COUNT          203 a          521 c          541 g          288 t
ORIGIN      
        1 ccaggtcgcc cagccgtttg gccctgggat ggaacgcgac gagcagcgtg ccgatgaggt
       61 agggcggcgg cagaaagtcg gcccagcgca gcaggtttcg gacgaccgcg gcaccgagcg
      121 tgacggcgtg gcccgtgtcc atgagcacgc ggatgccggt ggcgcgcttg cccggcgtct
      181 gcccgccgcg gagtccctcg aagaggatga aatagccgtt ccaggcgagg aacccgagga
      241 ggccgagcac caccatgccg acgcgcccga gcgtgaagcc gtacccggcg agaatcccga
      301 gcgcgatgac gacggcgacc gtcgctccag cgagaaggag cgtgtcgagc accgcggcga
      361 gcgtgcggct cccgatcccc gcgatctcga ggtcgaggtt cacgtgctcg ggagtctcga
      421 cttcgaggtg ctggcgaaaa tccggggcgc tgccgcgaag cgcgggcatg gagcgattgt
      481 aatatcttac gcgtcgcgga cgccacccat ccgtcatttc atcggagcag tcgatgaccc
      541 ctcccacgct ccgcccgctc tcggtgggcg agatcctcga tgtctcgttc acgctgtacc
      601 ggcggcattt cggggccttg gcgaccgtgg ccctggtgtg cacggggttg ccgctggtcc
      661 tgcggctgtt tctggaggcc ggcggggggc tcttccagaa cccggcgctc gggctggtct
      721 acaccatcgt cttcgtcacc ctcaatctgg tggccaccgc cgccaccgtc ttcatcgtct
      781 cggagagcta tctgggccgt ccgatcgccg cgcgcgaggc cctcaaccgc tcggcgccct
      841 acctctcccg catcctcgtc tgcacgctgc tcctcgcgct ggtggtgttc gtcggcttcc
      901 tgctgctggt cattccgggc atcatcctgg ccgtcgggct ggccctcgcg gtgccggtcg
      961 tggtgcttga gccgaagacc agcgcgagcg cggccctgag ccggtcgtgg gagctgaccc
     1021 gcggcttccg gtggcggatc ttcggtctgg gcatcacgct cctggtgatc ctctacgtgc
     1081 cggtgatcgc catcacggga ttgttcgcga tcgcgatgcc cggcgcggcc gccgggcatt
     1141 tcgggcccgc catcgcggcc acggtcatcg ggctggcggt gggcggcctg gtgcagatgt
     1201 tcatctatcc gctgctctac tgtgtgctca ccgtgacgta ctacgatctc cgggtgcgga
     1261 aggaagcgtt cgacctggaa gtcctggcgg cagggctctc ccgggcgtga tgactccgca
     1321 aggtccggtg gtgccgaccg ccccggattc tctccgggcc gtgctcgaca aggtctttgc
     1381 ggacccggcc tacgagtggg tggagccgag gaacccgctg gactttctgc tccgctggtg
     1441 gcgggacttt ctgcgctggc tgagcggcct ggagcaggcg cagccgctgt tctactgggc
     1501 cctgatctgg atcctcaccg ccatcctggc ggcgatcgtg gtgcacgcgg tgt
//
LOCUS       DATIFF010000535         1727 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2222036, whole genome shotgun sequence.
ACCESSION   DATIFF010000535 DATIFF010000000
VERSION     DATIFF010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1727
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2222036"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..596)
                     /locus_tag="VLD58_07950"
     CDS             complement(<1..596)
                     /locus_tag="VLD58_07950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54274.1"
                     /translation="MFARAWEALADTYQTQAVEFVRRLRGRLPLDEALDRYFREVGVP
                     AAMVDTVRARALIALTDLVEEEDEPSDAEPAAWSTLRPDQLLGAFRRRAQYVEGTNLE
                     CRLAASVADEAVAATHVRMALETAELLIAECTPDEAIMRYIRTFSLPAIDTQLIFRRA
                     LAMWAERDPLGLDRVEPVAPSVPVRSLPMPLDLGRKLRV"
     gene            1004..>1727
                     /locus_tag="VLD58_07955"
     CDS             1004..>1727
                     /locus_tag="VLD58_07955"
                     /inference="COORDINATES: protein motif:HMM:NF014803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54275.1"
                     /translation="MPLRLQQEPAIATTVAPPGQAPPSWTVRDAEKLYNMTGWGLGYF
                     RINPDGHVQVHPDANRKRGLDLYNLAMDLHAQGVGLPLLLRFSDILRSRIEALSGEFA
                     SAIKEFGYEGRYTTVYPVKVNQQRHVVQEIVEFGATHGVGLECGSKPELQAVLGLNET
                     TNHLIVCNGYKDEEFMRLALMGQKLGHTVMVVLEQLNELDVFLNVADEMGLQPTAGVR
                     IKLATEGSGRWAKSGGEKSKFGL"
BASE COUNT          282 a          615 c          580 g          250 t
ORIGIN      
        1 acccggagct tgcgcccgag atcgagcggc atcggcaacg accgcaccgg gacactcggc
       61 gcgaccggct ctacccggtc cagtccgagc ggatcgcgct ccgcccacat cgccagggcc
      121 cgccggaaga tgagctgggt gtcgatcgcc ggcaggctga aggtccggat gtaccgcatg
      181 atcgcctcgt cgggggtgca ttcggcgatc agcagctcgg cggtctccaa cgccatccgc
      241 acgtgggtgg ccgccaccgc ctcgtcggcc accgaggccg cgagccggca ctccagattg
      301 gtgccttcga cgtactgcgc ccggcgccgg aacgcgccca gcagctggtc ggggcggagc
      361 gtgctccacg cggccggctc cgcgtccgag ggctcgtcct cctcctcgac caggtcggtc
      421 agcgcgatca gcgcgcgggc tcgcaccgtg tccaccatcg cggccggcac cccgacctcg
      481 cggaagtacc ggtcgagcgc ttcgtcgagc gggagccgcc cgcggagccg gcgcacgaac
      541 tctaccgcct gcgtctgata ggtgtcggcc agggcctccc aggcacgggc gaacaccacc
      601 tgaagccgaa gacgaatcga cccggacagg cgtcgagctg agatcaagct gggcgcgctc
      661 atgcaatccc cctcgattga accagtgtgt gctacgaggt gcgttcctgc tgtacggttt
      721 cgcgccgctg cttaatgcga gcttcatgcc cgcgaatgga ctctcagccg gggcggtaga
      781 tcattgccgg gtattgaatt agggcgtggt gcgaggcgct gcaccggggc ggcggagcgg
      841 cggatgtggc gaccccgcca ctagtcggcg agcggcggaa ccgcccccct cgccggccgc
      901 cacctgggcc gccgattcgc cgccggcctc cggcacgacg acccgccgtc cggcctccaa
      961 ggatcccacc ggcgcttttc cccggccccc ggagccatta caattgcccc ttcgtctcca
     1021 gcaggagcct gccatcgcca cgaccgtcgc ccccccgggg caagccccgc cgagctggac
     1081 cgtccgggac gccgaaaagc tgtacaacat gaccggctgg ggcctgggct atttccggat
     1141 caaccccgac gggcacgtcc aggtgcaccc cgacgccaat cgaaagcgtg gcctggacct
     1201 ctacaacctc gccatggacc tgcacgccca gggcgtggga cttccgctgc tgctccgctt
     1261 ctccgacatc ctgcgctccc ggatcgaggc cctctcgggc gagttcgcca gcgcgatcaa
     1321 ggagttcggc tacgagggac gatacaccac cgtgtatccg gtgaaggtga atcagcagcg
     1381 gcacgtggtg caggagatcg tcgagttcgg ggccacccac ggggtcgggc tggagtgcgg
     1441 cagcaagccg gagctgcagg cggtgctcgg cctcaacgag acgaccaacc acctgatcgt
     1501 ctgcaacggg tacaaggacg aggagttcat gcggctggcc ctgatgggcc agaagctggg
     1561 ccacacggtc atggtggtgc tggagcagct caacgagctc gacgtcttcc tcaacgtggc
     1621 cgacgagatg ggcctccagc cgaccgccgg agtccggatc aagctcgcca ccgagggctc
     1681 gggccgctgg gccaagagcg gcggcgagaa gtcgaagttc ggcctcg
//
LOCUS       DATIFF010000536         1464 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2069767, whole genome shotgun sequence.
ACCESSION   DATIFF010000536 DATIFF010000000
VERSION     DATIFF010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1464
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2069767"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            248..724
                     /locus_tag="VLD58_07960"
     CDS             248..724
                     /locus_tag="VLD58_07960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54276.1"
                     /translation="MQQRNTLGVSDSIGTARSTVHPWLGGVTLATRPRVSLVIAATGG
                     GAQAALALDATLPACRELQVELLLVRAGDPVTLHRLPDGVRVVAAAPEVPLEGYRALG
                     LQAASWDVVLLTTDIDAVGRDWQSILVHRLGLVAESGRGEQATADPTPASHGNPVA"
     gene            721..>1464
                     /locus_tag="VLD58_07965"
     CDS             721..>1464
                     /locus_tag="VLD58_07965"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB54277.1"
                     /translation="MTGGSRGLSVVVPSVNGWSDLSDCLRALMAAGRDVPLEVLVVDR
                     LGDAVRDRIRTEFPSVRILPAPPGTTIPALRAMAFEAATADAVAVIEDHVLVPPGWAK
                     ALLAALAAGEDVIGGGVENAATETVVDWAAFLCEYSQLIPPLPSGPVAALTGNNTAYR
                     RSVLQRYRSVWSAGGWENRLHDALRRDGIPLYQHPEIVVGHKMHYSIPGYLEQRYLYA
                     RAWAGDRVAGGSPLRRLGFGSAALLLPTLL"
BASE COUNT          206 a          477 c          532 g          249 t
ORIGIN      
        1 aaaggggcgc tcggtcggga ctcgaatacc cgtccgctcc gcgattcgct ggcgctaacg
       61 ccattggcca ctcgcggatg cggggggacc gcctgtcgac ccacggttgt ggccccgagg
      121 ggctatgaca atactatgca acgcattaga tgaatacacc ttagccgctg agcactgccg
      181 gccgagccac gccggcactg gcaccacaat tgccacctca accactcgaa actacggcta
      241 tcatcccgtg caacaacgca acactcttgg agttagcgac tccatcggta ctgcccggag
      301 cacggttcat ccctggctgg gtggagttac tctggcaacg agaccccggg tttcccttgt
      361 catcgccgcg accggcgggg gcgctcaggc ggccctggcg ctcgatgcga cgttgccggc
      421 gtgccgggaa cttcaggtgg agctcctcct ggtgcgcgcc ggcgaccccg tgacgctcca
      481 ccggctcccc gatggggtgc gggtcgtggc ggcggctccc gaggttccgc tcgaggggta
      541 tcgggcgctc ggactgcagg ctgcctcgtg ggatgttgtc ctgctgacca cggatatcga
      601 cgcggtcggt cgcgactggc agagcattct ggtccatcgg ctgggcctgg tggccgagtc
      661 aggccggggg gagcaggcca cggcggaccc gacgcctgcc tcacacggga atccggtggc
      721 gtgaccggcg ggagccgcgg gctgtcggtg gtggtgccct cggtcaatgg ctggagcgac
      781 ctctccgact gtctgcgcgc gctgatggcg gccgggcggg atgtgccgct ggaggtgctg
      841 gtcgtcgatc ggttgggcga tgcggtgcgg gaccggatca ggacggagtt cccctcggtg
      901 cggatccttc cggcgccgcc gggtaccacc attccggcgc tccgcgcgat ggccttcgag
      961 gccgccacgg cggacgccgt cgccgtgatc gaggaccatg tgctggtgcc gcccggctgg
     1021 gcgaaggcgc tgctcgccgc gctggccgcc ggcgaagacg tcatcggtgg cggcgtcgag
     1081 aacgcggcga ccgagactgt ggtcgactgg gccgcgttcc tctgtgaata cagtcaactg
     1141 ataccgccac tgccctcggg gccggtggct gccctgaccg gcaacaacac cgcctaccgg
     1201 cgcagcgtgc tccagcggta ccggagcgtc tggagcgcgg gaggctggga gaatcggctg
     1261 cacgatgcgc tccggcggga tgggatcccg ctgtaccagc atccggagat cgtcgtcggc
     1321 cacaagatgc attactcgat accgggctac ctggagcagc gctacctgta cgcgcgggcc
     1381 tgggccgggg accgggtggc tgggggaagt ccgttgcgtc ggctcgggtt tggctctgcg
     1441 gcgctgctgc tgccgacgct gttg
//
LOCUS       DATIFF010000537         1339 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1300290, whole genome shotgun sequence.
ACCESSION   DATIFF010000537 DATIFF010000000
VERSION     DATIFF010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1339
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1300290"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1179
                     /locus_tag="VLD58_07970"
     CDS             <1..1179
                     /locus_tag="VLD58_07970"
                     /inference="COORDINATES: protein motif:HMM:NF028259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54278.1"
                     /translation="VNVIPARRTRELLGLIALGALAVVVILLRVIQPEQLARPEGFRN
                     FVDYLAVLRTPTSPLLPNEWATAMIMNWLLRIADPRPVLALWGAAAGALALGAAAHRA
                     LFLPGFSKAQEGAERKVRRPLRGALGGALRLLPPAKREFVLKDLRLFFRDNTQWSQLI
                     LLAVLLLIYVFNIKSLPIHSGERIPFSLVTMISFLNLGLAGFVLAAVAARFIFPGISL
                     EGRQMWLLRSSPLDPQAMLWSKYWMGTAPLLLLALAITILTNSLLRVTPFMMVIGVGT
                     ITLYTLAASSLALTFGVYYPQFGTENAAQIPTSFGGVVYMMASLSLLAVVIMIEAIPV
                     AAHLRALHRGTPVGATGDLVLALGGVAVILVAATIIPLRLSATRIERMEISSGRVETE
                     "
BASE COUNT          172 a          474 c          465 g          228 t
ORIGIN      
        1 gtgaacgtca tcccggcccg tcgcacgcgg gagctgctgg ggctgatcgc gctgggcgcc
       61 ctcgccgtgg tggtgatcct gctccgggtg atccagccgg agcagctggc ccgcccggag
      121 gggttccgca acttcgtgga ctatctcgcg gtactccgga cgcccaccag cccgctgctc
      181 cccaacgagt gggcgaccgc gatgatcatg aactggctgc tccggatcgc cgacccgcgg
      241 ccggtcctgg cgctctgggg cgccgccgcc ggggcgctcg cgctgggtgc cgcagcgcac
      301 cgggcgctct tcctccccgg cttctccaag gcgcaggagg gggccgaacg gaaggtgcgc
      361 cggccgctgc gcggtgcgct gggcggggcg ctccgtctgc tgccgccggc caagcgggaa
      421 ttcgtgctca aggacctccg gctcttcttc cgcgacaaca cccagtggag ccagctcatc
      481 ctcctcgcgg tgctgctgct gatttacgtc ttcaacatca agtccttgcc gattcactcg
      541 ggcgagcgga ttccgttcag cctggtcacc atgatctcgt tcctcaacct tggcctggcc
      601 ggcttcgtcc tggccgcggt ggcggcccgg ttcatcttcc cggggatctc gctggaaggc
      661 cgccagatgt ggctgctccg ctccagcccg ctcgaccccc aggcgatgct gtggagcaag
      721 tactggatgg gcacggcgcc gctgctgctg ctcgcgctgg cgatcaccat cctgaccaac
      781 tcgctgcttc gggtcacccc gttcatgatg gtgatcgggg tcgggacgat caccttgtac
      841 accctggccg ccagctcgct ggccctcacc ttcggggtgt actaccccca gttcggcacc
      901 gagaacgcgg cccagatccc caccagcttc ggcggggtgg tctacatgat ggcgagcctg
      961 agcctgctcg cggtggtgat catgatcgag gcgatcccgg tggcggcgca cctgcgcgcc
     1021 ctgcaccgcg gcaccccggt gggcgccacc ggcgacctgg tgctcgcgct gggcggggtg
     1081 gccgtgatcc tggtggccgc gacgatcatc ccgctccggc tcagcgccac ccggatcgag
     1141 cggatggaga tctcgtcggg ccgggtggag accgaatgat cgcggtggat ctcttcagcg
     1201 acacggtcac ccggccgacc ccggcgatgc gccgggcgat ggccgaggcg gaggtcggcg
     1261 acgagcagcg cttcgaggac ccgacggtga acgctctcca ggagcgggtc gcggagctgc
     1321 tcggcaagga ggcggcgct
//
LOCUS       DATIFF010000538         1345 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_224027, whole genome shotgun sequence.
ACCESSION   DATIFF010000538 DATIFF010000000
VERSION     DATIFF010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1345
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224027"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..471
                     /locus_tag="VLD58_07975"
     CDS             <1..471
                     /locus_tag="VLD58_07975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSB54279.1"
                     /translation="RLRRRLGIVFQDFRLLEDRTAEENIAFALEVTGARADAIPARVM
                     RALTQVGLAAKAHAYPQEMSGGEQQRVAIARALINDPTILLADEPTGNLDERATRGVF
                     QLIREINATGTCVVMATHDLDLVKQTTYRNVEMREGAIVFDSGQDEQSPEQELA"
     gene            468..1337
                     /locus_tag="VLD58_07980"
     CDS             468..1337
                     /locus_tag="VLD58_07980"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HSB54280.1"
                     /translation="MRLLLREALLAFRRAPLLSALSITTIGFSLYAVGLFALVAVNLR
                     EALRTVEQRVEVVAYLLRGTPAETIAQASQDIAAFPEVQRVTFVSEEEALKRARAELV
                     EFRDAYRDLSVNPLPASLEIQLKEGFRDAQHTAAVADRLRGYGFIDDVRYGREWIEKL
                     DRLRNIAGVVGLTIGLAFAAVAVVIIGVTIRITVLQRAREITIMRLVGATNGFIRGPF
                     LLEGMLKGLLGGVLAVGLCYGTFLLFRGQSELATSGIVFLRPVHVGLGVVFGVFIGLA
                     GSLVSVGRHLRNV"
BASE COUNT          198 a          467 c          451 g          229 t
ORIGIN      
        1 cggctgcgcc gccggctcgg aatcgtgttc caggatttcc ggctgctgga agaccgcact
       61 gccgaggaga acatcgcgtt cgcgctggag gtgaccggcg cgcgggccga tgccatcccg
      121 gcacgggtca tgcgcgcgct cacccaggta ggactcgcgg ccaaggccca cgcctacccc
      181 caggaaatgt cgggcggcga gcagcagcgc gtcgccattg cccgggccct gatcaacgac
      241 cccaccattc tcctcgccga cgagcctacc ggaaacctgg atgagcgcgc cacccgcggc
      301 gtcttccagc tgatccgcga gatcaacgcc accggcacct gcgtggtcat ggcgacccac
      361 gatctcgacc tggtcaagca gaccacatac cgcaacgtcg aaatgcgcga aggcgccatt
      421 gtcttcgaca gcggccagga cgagcagtct cccgagcagg agctggcatg agactcttgt
      481 tgcgcgaagc gctgctcgcc ttccgccggg cgcccctgct ctcggccctt tcgatcacca
      541 cgatcggttt ttccctctac gccgtggggc tcttcgcgct ggtggcggtg aacctgcgcg
      601 aggcgctccg gaccgtggag cagcgggtcg aggtcgtcgc ctacctcctc cgcggcaccc
      661 ccgccgagac catcgcccag gcctcccagg acatcgctgc cttccccgag gtccagcggg
      721 tcaccttcgt gagtgaggag gaagcgctca agcgggcccg ggccgagctg gtggagttcc
      781 gcgatgccta tcgcgacctg tcggtgaatc ctctccccgc ttccctcgag atccagctca
      841 aggaggggtt ccgcgacgcc cagcacaccg ccgcggtggc cgataggctg cgggggtacg
      901 gattcatcga cgatgtccgt tacggccggg agtggatcga gaagctcgac cggctccgga
      961 acatcgccgg agtggtgggc ctcacgattg ggctcgcctt tgcggcggtc gcggtggtga
     1021 tcatcggtgt caccatccgc atcacggtgc tgcagcgggc ccgcgagatc accatcatgc
     1081 ggctggtcgg cgccaccaac ggcttcatcc gcggcccctt cctcctcgaa gggatgctga
     1141 aggggctgct ggggggcgtg ctggcggtcg ggctctgcta cgggaccttc ctgctcttcc
     1201 gcggccagag cgagctcgcg acgtcgggga tcgtcttcct ccggccggtc cacgtcggcc
     1261 tcggcgtggt cttcggggtg ttcatcgggc tcgcgggcag tctggtcagc gtcggccggc
     1321 acctgcggaa tgtgtaggcg ggaag
//
LOCUS       DATIFF010000539         1529 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_530674, whole genome shotgun sequence.
ACCESSION   DATIFF010000539 DATIFF010000000
VERSION     DATIFF010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_530674"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1151)
                     /locus_tag="VLD58_07985"
     CDS             complement(<1..1151)
                     /locus_tag="VLD58_07985"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSB54281.1"
                     /translation="MPFSALKLHPDLARGLKELGFTRPTPIQSEAIPPALEGRDILAC
                     AMTGSGKTAAFLLPILHKLMGRPRGVTRALVLTPTRELAAQILGDLNDIAVHTPLTAA
                     AVFGGVGMGPQEHAFRSGVDVIIATPGRLLDHFRAPYARLASLEYLVLDEADRMLDMG
                     FLPDIRRVLRHLPAKRRTYFFSATMPPPIAALAQEMLQKPVAINVSRPAAPAVGITQA
                     VYPVAQELKSALLAALLDRNDMGEALVFTRTKHRANRLQAFLVRRGFKAERIHGNRSQ
                     AQRTEALAGFKSGKYRVLVATDIAARGIDIEALGHVVNFDVPLVPEDYIHRVGRTARA
                     EATGEAFTFVSPAEEGELRAIERAVGKRLPRVTVPDFNYAARPEGTLEIP"
     gene            1277..>1529
                     /locus_tag="VLD58_07990"
     CDS             1277..>1529
                     /locus_tag="VLD58_07990"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB54282.1"
                     /translation="MPGPQERLATALADRYRIERELGQGGMATVYLAHDLRHERRVAL
                     KVLKPELAAVIGAERFLQEIKTTANLQHPHILSLFDSGDA"
BASE COUNT          226 a          519 c          548 g          236 t
ORIGIN      
        1 ggaatttcca gcgtcccctc gggtcgtgcc gcgtagttga aatcgggcac ggtcacgcgg
       61 gggagccgtt tccccaccgc acgctcgatc gcccggagct ccccctcctc ggccggtgag
      121 acgaaggtga aggcctcgcc ggtggcctcc gcccgcgcgg tgcggcccac ccggtggatg
      181 tagtcctcgg gcaccagcgg cacgtcgaag ttcaccacgt gaccgagcgc ctcgatgtcg
      241 atgccccggg cggcgatgtc ggtggccacc agcacccggt atttcccgct cttgaacccc
      301 gccagcgcct cggtgcgctg cgcctgcgag cggttgccgt ggatccgctc cgccttgaag
      361 ccgcgcctga cgagaaaggc ctggagccgg ttggcgcggt gcttcgtccg ggtgaagacg
      421 agtgcctcgc ccatgtcgtt ccggtcgagg agcgccgcga gcagcgccga cttgagctcc
      481 tgggccaccg gatacaccgc ctgggtgatt ccgaccgccg gggccgcggg gcggctcacg
      541 ttgatcgcca ccggcttctg cagcatctcc tgcgcgagcg ccgcgatcgg cggcggcatg
      601 gtggcgctga agaagtaggt ccgccgcttc gcggggaggt gccggagcac ccggcggatg
      661 tcgggcagga accccatgtc gagcatccgg tccgcctcgt cgagcaccag gtactcaagg
      721 gaggcgagcc gcgcgtaggg cgccctgaag tgatcgagca atcggcccgg ggtggcgatg
      781 atcacgtcca ccccgctccg gaaggcatgc tcctgggggc ccatcccgac cccgccgaag
      841 accgcagcgg ccgtgagcgg cgtatggacc gcgatgtcat tgagatcgcc aaggatctgg
      901 gcggcgagct cccgggtggg ggtgagcacc agcgcccgcg tgacgccccg gggccggccc
      961 atcagtttgt ggaggatggg aagcaggaag gccgccgtct ttccgctgcc ggtcatcgcg
     1021 caggccagga tgtcccggcc ctcgagcgcg ggggggatgg cctcggactg gatcggggtc
     1081 gggcgggtga agccgagctc tttcaggcct cgggcaaggt cgggatgaag cttcagggcg
     1141 ctgaagggca ctcgggactt tggtgaaagg tgacctaact tagccgcagg aggcgcttct
     1201 ggtcgggcgc ggctccgggc ggtagcttcc tgatccatgt tccgtcccac cccagagcga
     1261 accagctgag accctgatgc ccggtcccca ggagcgcctg gcgacggctc tcgccgatcg
     1321 ctatcggatc gaacgcgagc tcggccaggg cggcatggcg acggtgtacc tggcgcatga
     1381 cctccggcac gagcggcggg tggccctcaa ggtgctcaag ccggagctcg ccgcggtcat
     1441 cggcgccgag cgcttcctgc aggagatcaa gaccaccgcc aacctgcagc atccccacat
     1501 cctctcgttg ttcgactcgg gcgacgccg
//
LOCUS       DATIFF010000540         1134 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2222560, whole genome shotgun sequence.
ACCESSION   DATIFF010000540 DATIFF010000000
VERSION     DATIFF010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2222560"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..272
                     /locus_tag="VLD58_07995"
     CDS             <1..272
                     /locus_tag="VLD58_07995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54283.1"
                     /translation="SSLMLTHPMHTVRAAELQRWITGGDYDRILRGEYVRRSGEAAQR
                     PLKDDLSAAGDYYAHEAKETLGQVVDAAKKAAGRVGDAFKKARQP"
     gene            269..>1134
                     /gene="purD"
                     /locus_tag="VLD58_08000"
     CDS             269..>1134
                     /gene="purD"
                     /locus_tag="VLD58_08000"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR00877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HSB54284.1"
                     /translation="MRILVVGGGGREHALVWALRKEDASADLYCAPGNPGTEDLATNL
                     PIGATDIDRLADAADAQGIDLTIIGPEAPLAMGLADRLRAEGRAVFGPSRAAAEIEAS
                     KAFAKEVMARAGVPTAASRAFTDLAAALRYVDAHAEPLVVKASGLAAGKGAVVCETRA
                     EARDTLRQMLGERRFGDAGSVVVIEEFMPGEELSVLAITNGREVELLPAAQDHKRLGE
                     GDTGPNTGGMGAYSPVALGTPALLDRVRNEVLYPTLTEMERRGIRYNGVLYAGLMIGP
                     DGVPRVVEFNCRL"
BASE COUNT          197 a          358 c          423 g          156 t
ORIGIN      
        1 tgagctccct catgctcacc catccgatgc acaccgtacg ggcggccgag ctgcagcgct
       61 ggatcacggg cggggactac gaccggattc tccgcggcga gtatgtgagg cgctccggtg
      121 aagcggcgca gcggccgctt aaggacgacc tcagcgccgc gggcgactac tacgcccacg
      181 aggcgaagga aactctgggc caggttgtgg atgccgccaa gaaggcggcg ggccgggtag
      241 gcgacgcatt caagaaggcg agacagccgt gaggattctg gtcgtcgggg gtgggggacg
      301 ggagcacgcg ctcgtctggg cgctccggaa ggaggacgcg agcgccgatc tttattgtgc
      361 tccgggcaat ccgggcacgg aggacctcgc taccaacctg ccgatcggcg ccaccgatat
      421 tgaccggctg gcggatgctg ccgacgccca aggcatcgac ctcaccatta tcggaccgga
      481 agcaccgctc gcgatggggc tggccgaccg actccgggcc gagggacgcg ccgtcttcgg
      541 accgagccgc gcagccgcgg agatcgaagc gtccaaggcc ttcgcgaagg aggtaatggc
      601 gagggccggg gtgccgacgg ccgccagccg ggcattcacc gacctcgccg ccgcgctcag
      661 gtacgtcgat gcccacgccg agccgctggt ggtcaaggcg tcggggctcg ccgccgggaa
      721 gggtgcggtg gtgtgcgaaa cccgggcgga ggcccgcgac acgctgcggc agatgctggg
      781 ggaaagaagg ttcggcgacg cgggcagcgt ggtcgtcatc gaggagttca tgcccgggga
      841 ggagctctcg gtcctggcca tcacgaacgg cagggaggtc gagctcctgc ctgctgccca
      901 ggatcacaag cgattgggcg aaggcgacac cggccccaac accggcggca tgggtgctta
      961 cagcccggtg gccctcggca cgccggcgct gctcgaccgg gtgcggaacg aagtgctcta
     1021 ccctaccctg accgagatgg aacgtcgggg tatccgatac aacggcgtgc tctacgccgg
     1081 actgatgatc gggccggacg gagtgccgcg ggtagtcgag ttcaactgcc ggct
//
LOCUS       DATIFF010000541         1064 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2069988, whole genome shotgun sequence.
ACCESSION   DATIFF010000541 DATIFF010000000
VERSION     DATIFF010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2069988"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..350
                     /locus_tag="VLD58_08005"
     CDS             <1..350
                     /locus_tag="VLD58_08005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54285.1"
                     /translation="IELELAAPSYTVRTLRALGEREPGNRFTLLLGADAARDLPAWFE
                     VETLPALADVVVFGRPGAPVPDLPIIHRVIEVPAVDISATLVRRWVAGGRSIRYLVPD
                     AVREYIAAHGLYR"
     gene            362..>1064
                     /locus_tag="VLD58_08010"
     CDS             362..>1064
                     /locus_tag="VLD58_08010"
                     /inference="COORDINATES: protein motif:HMM:NF019156.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54286.1"
                     /translation="MVKRVFTKVFGTRFQREMKRIRPLVDAIHRHEARLKDLSDAELQ
                     AQTAKCRGIIAERTAELAAEVDRLKRAKHDCPDAEERARLSDQLGQAEQRYARALQAA
                     LDDVLPEAYATVREACRRLLGTKVMVTGHEQAWDMVPYDVQLIGGIVLHQGKIAEMAT
                     GEGKTLVATLPLYLNALTGRGTHLVTVNNYLARRDSQWMGHLFTWLGLTVGCIDDTQP
                     ASPERKAAYRCDITYG"
BASE COUNT          166 a          356 c          390 g          152 t
ORIGIN      
        1 ggatcgagct cgagctggcc gcgccgtcct acaccgtgcg gacactgcgg gccctggggg
       61 agcgcgaacc ggggaaccgg ttcacgttat tgctgggggc ggatgccgcc cgggacctgc
      121 cggcctggtt cgaggtggag acgctgcccg ccctggcgga cgtggtcgtg ttcggtcggc
      181 cgggggctcc cgtgccggac cttcccatca tccaccgggt gatcgaggtc ccggccgtgg
      241 acatttcggc gacgctggtg cggcgctggg tggccggggg ccggtccatc cggtacctgg
      301 tgcccgacgc ggtgcgcgaa tacatcgccg cgcacgggct gtatcgctag actgaggacc
      361 gatggtcaaa cgggtgttta ccaaggtgtt cgggacgcgg ttccagcggg aaatgaagcg
      421 catccgcccg ctggtcgacg cgattcaccg gcacgaagcg cggctcaagg acctgagcga
      481 tgcggagctc caggcccaga ccgccaagtg ccgggggatc atcgccgagc gcaccgcgga
      541 gctggccgcg gaagtggacc gcctcaagcg ggccaagcac gattgcccgg acgcggaaga
      601 gcgggcgcgg ctctcggatc agctgggcca ggccgagcag cgctacgcgc gtgcgctcca
      661 ggccgcgctg gacgacgtcc tgcccgaggc ctacgccacc gtgcgggagg cgtgccggcg
      721 gttgctgggc accaaggtca tggtcaccgg gcacgaacag gcctgggaca tggtgcccta
      781 cgacgtgcag ctgatcggcg gcatcgtgct gcaccagggc aagatcgcgg agatggccac
      841 cggggagggg aagaccctgg tcgccacgct gccgctctat ctcaacgcgc tcaccggccg
      901 cggcacccat ctggtcaccg tgaacaacta cctggcccgg cgggactcgc agtggatggg
      961 ccacctgttc acctggctgg gcctcactgt cggctgcatc gacgacacgc agcccgcttc
     1021 gcccgagcgg aaggcggcct accgctgcga catcacctac ggga
//
LOCUS       DATIFF010000542         1506 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2222694, whole genome shotgun sequence.
ACCESSION   DATIFF010000542 DATIFF010000000
VERSION     DATIFF010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2222694"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            291..596
                     /locus_tag="VLD58_08015"
     CDS             291..596
                     /locus_tag="VLD58_08015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54287.1"
                     /translation="MLTDLAGDSLRVLAQSGPIPDIDVFPGWSSDGRTVYYVGSDSAG
                     TGIFAAPIQGGGPRIAMKFDDPTRPWHRYGFRVFRDRFYFTVGDRQSHVWVAEIGER"
     gene            601..>1506
                     /locus_tag="VLD58_08020"
     CDS             601..>1506
                     /locus_tag="VLD58_08020"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HSB54288.1"
                     /translation="MISLLRPLPLRLQVLGSILAVLLPSTVVMFFYYPYRQEEIARAG
                     LHDQAEEMAEAIALAAGEALGQDDDTGVRDAVQWAGRDPAVVYVFVLDSAGEVLRGYD
                     PLRVRPRLSAHVGASTASEVNGWLQAAAPLTFRDRRVGVVYVGLATTVLEDEVFRNRV
                     ATVGLGVLILALGVLASFYLAARIAKPIGALRRATGEIARGNYSISLPPGGGEEVHAL
                     GEDFAGMATELRATTDRLAAARDAALAAERAKADFLATMSHELRTPMNGVTGMLGLLL
                     DTDLDRSQKEYAELAHRSAESLLAVI"
BASE COUNT          212 a          521 c          528 g          245 t
ORIGIN      
        1 actcgtttcg ggacggacgc cgccagatct acctgatctc cgcagatgga gggccgcgca
       61 tacctgtggc cccgaacgcc gacgatgacc gggatcccgc ctggactccc ggcggccggg
      121 ctattctgac cctcaccaac tacggccgtc cagacgtcga gacccggatc gtcaggcgga
      181 ctcggaacgg cctttggtct tctccggccc gctggcggaa gccgccgtgc gcagcccagt
      241 ggtcacccga tgagcgggtg gcggcttgcg ccgaaaatac gggacggctt ttgctgaccg
      301 acctggcggg cgattccctg cgagtcctgg cgcagagcgg gccgatcccc gacatcgacg
      361 tgttcccggg atggtcctcg gatggtcgca cggtgtacta cgtgggcagc gactccgcgg
      421 gcaccggcat tttcgcggcg cccatccagg gcggcggacc gcggatcgcg atgaagttcg
      481 acgaccccac ccgcccctgg caccgatacg gattccgggt gttccgggac cgattctact
      541 tcaccgtggg tgatcgacag agccacgtgt gggtggcgga gatcggggag cggtgaggcg
      601 atgatctctc tccttcgccc ccttccgctc cgactgcagg tgctcggtag catcctcgcc
      661 gtgctcctcc cgagcacggt ggtgatgttc ttctactatc cctaccggca ggaggagatc
      721 gcccgcgccg gcctccatga ccaggcggag gagatggccg aggcgatcgc ccttgcggca
      781 ggggaggcac tcgggcagga cgatgatacc ggcgtcaggg atgcggtgca gtgggccggt
      841 cgcgatcccg ccgtcgtcta tgtgttcgtg ctcgacagcg ccggggaggt gcttcgcggc
      901 tacgatcccc tgcgggtccg gccgcggctg tccgcgcatg tcggcgcctc gaccgcgagc
      961 gaggtgaacg ggtggcttca ggcagcggcg ccgctcacct tccgcgatcg gcgggtcggc
     1021 gtcgtctacg tggggctcgc caccaccgtg ctcgaggacg aagtcttccg gaaccgggtg
     1081 gccaccgtcg ggctcggggt cctgatcctc gccttgggcg tgctggcctc gttttatctg
     1141 gcggcccgga tcgccaagcc catcggcgcg ctgcggcggg ccaccggcga gatcgcccgc
     1201 ggcaactaca gcatctcctt gccgcccggt ggaggcgagg aggtccacgc cctcggggag
     1261 gacttcgccg gcatggcgac cgagctgcgc gcgacgaccg accggctcgc cgccgcgcgg
     1321 gacgcagcgc tcgccgcaga gcgcgccaag gccgacttcc tggcgaccat gagccacgag
     1381 ctccggaccc ctatgaacgg cgtcacgggg atgctcgggc tcctgctgga caccgatctc
     1441 gaccgctccc agaaggagta cgccgagctg gcgcaccgct cggcggagtc gctgctcgcg
     1501 gtgatc
//
LOCUS       DATIFF010000543         3655 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_70255, whole genome shotgun sequence.
ACCESSION   DATIFF010000543 DATIFF010000000
VERSION     DATIFF010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3655
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70255"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(44..1054)
                     /locus_tag="VLD58_08025"
     CDS             complement(44..1054)
                     /locus_tag="VLD58_08025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015352718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HSB54289.1"
                     /translation="MTSTAPATSDVELLNRLGSSVGQLRAQVGRRIVGQEEVIEGILT
                     AILAGGHALLIGVPGLAKTLMVSTVAEALRLSFNRVQFTPDLMPSDITGTEIIEEDLT
                     TGKRAFRFVNGPIFANVVLADEINRTPPKTQAALLQAMQEHEVTVGGQTYHLPEPFFV
                     LATQNPIEQEGTYPLPEAQLDRFMLELRVGYPTRSEEEAIVEQTTGVRPPELTAVLDA
                     EAVRGMQQLVRRIPVSKQLVRAAVALTRMTRPADADAPPFVKEYVEWGAGPRASQYLV
                     LGAKARAALAGRPMADLDDLRTVAQSVLRHRVVTNFAAEAAGRSNEDVVRELLGSKGW
                     VS"
     gene            1301..1567
                     /locus_tag="VLD58_08030"
     CDS             1301..1567
                     /locus_tag="VLD58_08030"
                     /inference="COORDINATES: protein motif:HMM:NF021073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HSB54290.1"
                     /translation="MKGPKPVQKEVGEAWRYETLGYTFAFSVIVFAGAGFLLDRVFKT
                     TPIFTVAGTLVGAGLAFVWVYQKVKADEARFKAERKPPPPEGKE"
     gene            1564..1905
                     /locus_tag="VLD58_08035"
     CDS             1564..1905
                     /locus_tag="VLD58_08035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54291.1"
                     /translation="MKVLLAGAGLTALMALLLVVWLGQKALVPALVMGVAATAIELMA
                     TRWLVRGLKASTRDTMQAFVAGMLFRLLGVGLFAGLVVWNRGTFQPLATGLAYVGVVI
                     PLLFLEARFIR"
     gene            1902..2744
                     /gene="atpB"
                     /locus_tag="VLD58_08040"
     CDS             1902..2744
                     /gene="atpB"
                     /locus_tag="VLD58_08040"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HSB54292.1"
                     /translation="MMLQDVNVKELIFHHTADAWEVWGLHLPRFADIHLGPLTLNLSP
                     TKHVVFMLIAAVLVFATMKIAGMQLAKQRAHEKAPKGFANAVEGLVLFVRNDIAIANI
                     GHDGAKFAPLIITLFFFILYCNFLGLIPFGASPTGNVAVTGGLALLVFAVVEIGGMLK
                     LGFKGYMGTIFPHMPGMHGAAAAVMSVAMAPIEILGKLVKPFALAVRLFGNMTAGHFV
                     ILSLFAIVFIFGHLGFWSWGIGIASAAMVLGVMLLEIIVALLQAYVFALLSAVFIGLM
                     QHEH"
     gene            3009..3293
                     /gene="atpE"
                     /locus_tag="VLD58_08045"
     CDS             3009..3293
                     /gene="atpE"
                     /locus_tag="VLD58_08045"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002636238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F0 subunit C"
                     /protein_id="HSB54293.1"
                     /translation="MLNMLSLINLLLVQGADAAAAVPNYGRLGAGIGIGLAIIGAGLG
                     LGRIGGSVAESIARQPEAGGDIRGAGLLIAVLLEGATIIALVFALLFLFL"
     gene            3306..>3655
                     /locus_tag="VLD58_08050"
     CDS             3306..>3655
                     /locus_tag="VLD58_08050"
                     /inference="COORDINATES: protein motif:HMM:NF012645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F0 subunit B"
                     /protein_id="HSB54294.1"
                     /translation="MLLTLLAVIQEEAAHAGPGSPFEVNPGLTIWTLLVFVALLVVLY
                     KFAYPAILKTTEDRERTIARQLGEAEKANTEAKGLLEENRKLLAQARTQAQALVADAK
                     SAAEKERTAAIEKTR"
BASE COUNT          560 a         1133 c         1317 g          645 t
ORIGIN      
        1 ttccttcctc ctggccgctt tgccgctttg ccgccttgcc gccttacgac acccacccct
       61 tgctccccaa caactcccgc accacatcct cgttgctccg cccggcggcc tcggcggcaa
      121 aattggtgac cacccggtgg cggaggaccg actgggcgac ggtgcggagg tcatccagat
      181 cggccatggg ccggccggcc agggcagcgc gggccttggc gccgagtacc aggtactgcg
      241 aggcgcgggg gccggcgccc cactcgacgt actccttcac gaacggtggc gcgtcggcat
      301 cggcgggacg ggtcatgcgg gtcagtgcga ccgcggcgcg gaccagctgc ttcgagaccg
      361 ggatccggcg caccagctgc tgcatccccc ggaccgcctc ggcatcgagg acggcagtga
      421 gttcgggcgg gcgcacgccg gtggtctgct cgacgatcgc ttcttcctcg ctccgggtgg
      481 ggtagccgac ccgcaattcc agcatgaagc ggtcgagctg ggcctccggc agcgggtagg
      541 tgccttcctg ctcgatggga ttctgggtcg cgaggacgaa gaagggctcg ggcaggtgat
      601 aggtctggcc tccgaccgtg acctcgtgct cctgcatggc ctgcagcagc gcggcctggg
      661 tcttcggcgg ggtgcggttg atctcgtcgg ccaggaccac attggcgaag atcgggccgt
      721 tgacgaagcg gaacgcccgt ttgccggtgg tcaggtcttc ctcgatgatc tcggtgccgg
      781 tgatgtcgct cggcatgaga tcgggggtga actgcacccg gttgaacgag agccgcagcg
      841 cctcggccac ggtcgagacc atcagggtct tggcgaggcc cggcacgccg atgagcagtg
      901 cgtggccgcc ggccaggatc gcggtgagaa tcccctcaat gacctcttcc tggccgacga
      961 tgcggcgacc gacctgggcc cgcagctgcc cgaccgaact gcccagccgg ttgaggagtt
     1021 cgacgtcgga ggtggctggg gcggtcgagg tcatcggggc ctgagggagt cgggaggagg
     1081 cgctcggacg cacagagtac gcgggggcgc gggaccggtt tcggtcaccg ggtaaatagg
     1141 cggcaagacg gccgagcggc aaggcggcca gggggttcct gccgcagcgc cgttcaaaat
     1201 cgcggtcgaa aatgaagccg gaggccggct tgctgccccc cttttcggcc gccgggtttt
     1261 gcttgcgaaa tttttcacaa gccggtagct ttccgcggct atgaagggcc cgaagccggt
     1321 gcagaaggag gtcggcgagg cgtggcggta cgagacactg ggctacacct tcgccttcag
     1381 tgtgatcgtc ttcgccgggg ccgggttcct gctcgaccgg gtgttcaaga cgacaccgat
     1441 tttcaccgtg gctggcacgc tcgtcggagc gggtctggcg ttcgtgtggg tctatcagaa
     1501 ggtcaaggcc gacgaggcgc ggttcaaggc cgagcgcaag ccgcccccgc cggagggcaa
     1561 ggagtgaagg tcctgctggc gggcgccggg ctcacggccc tgatggcgct gctcctggta
     1621 gtctggctgg gtcagaaggc gctcgtcccg gcgctggtga tgggcgtggc ggcgacggcg
     1681 atcgagctga tggcgacccg ctggctggtg cgcgggctca aggcgtcgac ccgtgacacg
     1741 atgcaggcgt tcgtggccgg gatgctcttc cggctgctgg gagttgggct ttttgccggg
     1801 ctggtggtgt ggaaccgcgg gacgttccag ccgctcgcga ccgggctggc ctatgtgggc
     1861 gtggtgatac ctctgctctt tctcgaggcg cgattcatcc gatgatgctc caggacgtca
     1921 acgtcaagga actgatcttc caccacaccg ccgatgcgtg ggaggtctgg ggtctgcacc
     1981 tgccccggtt cgccgacatt cacctgggcc cgctgacgct caacctgtcg cccaccaagc
     2041 atgtcgtgtt catgctgatc gcggcggtgc tggtgttcgc gacgatgaag atcgcgggga
     2101 tgcagctcgc gaagcagcgg gcgcacgaga aggcgcccaa gggctttgcc aacgcggtcg
     2161 aggggttggt gctcttcgtc cgcaacgaca tcgcgatcgc caacatcggc catgacgggg
     2221 ccaagttcgc cccgctcatc atcacgctct tcttcttcat cctgtactgc aatttcctgg
     2281 gcctgatccc gttcggcgcg agccccaccg gcaacgtggc ggtgaccggc ggcctggcgc
     2341 tcctggtgtt cgccgtggtc gagatcggcg gcatgctcaa gctgggcttc aagggctaca
     2401 tgggcaccat cttcccccac atgccgggga tgcacggtgc ggcggcggcg gtcatgtcgg
     2461 tcgccatggc gccgatcgaa atcctgggca agctggtgaa gcccttcgcg ctggcggttc
     2521 gtctattcgg caacatgacg gcgggtcact tcgtgatcct gtcgctcttc gcgatcgtgt
     2581 tcatcttcgg ccaccttggc ttctggagct ggggcatcgg tatcgccagc gcggcgatgg
     2641 tcctcggggt gatgctgctc gagatcatcg tggcgctgct gcaggcgtat gtgttcgcgc
     2701 tgctcagcgc ggtgttcatc gggctgatgc agcacgagca ttagggagtg aggagtaaaa
     2761 agtaagaagt gagaagggag aagggagaag ggagaagggc gagggagaag ggcgagggag
     2821 aaggtccttg gcggacgggt gtccgggttc agccgagggg taatccaccg gatggtggac
     2881 gaagctcact ggtcttccgg gaccgctggt gagccacggg gacggggtcg agccgggaga
     2941 ctcgaccgac tgaccggcgg gcacgaagga ctcaacgtca tctcctccaa ggtcgtctgg
     3001 agactgtcat gctgaacatg ctcagcctta tcaacctgct gctggtccag ggcgccgacg
     3061 ctgcggcggc ggtcccgaac tacggccgtc tcggcgccgg tatcggcatc ggcctcgcca
     3121 tcatcggcgc cggcctcggc ctgggccgca tcggcggctc ggtggccgag tcgatcgcgc
     3181 ggcagccgga agcgggcggc gacatccgcg gcgcgggcct gctgatcgcg gtgctgctcg
     3241 aaggcgcgac catcatcgcg ctggtgttcg ccctgctgtt cctgttcctt taatcgggac
     3301 gcggtatgct gctcaccctg ctcgcagtca ttcaggaaga ggcggcccac gccggaccgg
     3361 gcagcccgtt tgaggtcaat cccgggctga ccatctggac gctgctggtc ttcgtcgcgc
     3421 tgctcgtggt gctgtacaag ttcgcctacc cggcgatcct caagaccacc gaggaccgcg
     3481 agcggaccat cgcccggcag ctgggcgagg cggagaaggc caacaccgag gccaaggggc
     3541 tgctcgagga gaaccggaag ctgctggccc aggcgcgcac tcaggcgcag gccctggtgg
     3601 ccgacgcgaa gtcggcggcc gagaaggaac ggaccgccgc catcgagaag acccg
//
LOCUS       DATIFF010000544         2919 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_224433, whole genome shotgun sequence.
ACCESSION   DATIFF010000544 DATIFF010000000
VERSION     DATIFF010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2919
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224433"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2919)
                     /gene="rpoC"
                     /locus_tag="VLD58_08055"
     CDS             complement(<1..>2919)
                     /gene="rpoC"
                     /locus_tag="VLD58_08055"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HSB54295.1"
                     /translation="INYRSFKPEKDGLFCERIFGPVKDWECHCGKYKRIRYRGVICDR
                     CGVEVTLSKVRRERMGHIELSVPVAHIWFFKTLPSPMGNLLNVTLRDLERVIYYSSYI
                     VIEPGDQDVDANQLLDEDEYLALRAKAREDGDSAFRADIGAPAVRELLNRIDVKKLAE
                     ELRGSVATETSQHRKKQMLKRLKIVDAFLTSGENGDVPNNPAWMILDVIPVIPPDLRP
                     LVPLDGGRFATSDLNDLYRRVINRNNRLQKLIQHKAPEVILRNEKRMLQEAVDALFDN
                     GRRSKAIRGRGKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELRLHQCG
                     LPKAMAVELFKPFIIHKLVEKGIAETVKRAKKIVEKESPEVYEILEEIIQDHPVLLNR
                     APTLHRLGIQAFEPVLVEGKAIRIHPLVCAAFNADFDGDQMAVHVPLSFEAQLEARLL
                     MISSNNILKPSDGRPVAEPSQDMVLGSYFLTKLPRGAEEPKEGKANPAWDKARYFGSL
                     AEIEMALLHRSIDYHTAICFWYHPPREALDPKPRWVRTTAGRVLFNSILPGQVVANHG
                     FKNDLMRKKALSELVLQSYREAGLANTVIFLDRLKEFGFRYATQGGISIGVEDLEIPR
                     EKATLLEEADKRVQRFQRAYNTGQITFGERYNKVIDAWTHANNDVAEAMVSHMRQSRG
                     GFNPVFMMFDSGSRGSRDQIRQLAGMRGLMAKPQKKLTGGIGEIIESPIKSNFREGLT
                     GLEYFISTHGARKGLADTALKTADAGYLTRRLVDVAQDVTITEEDCGTIQGLEISALK
                     EGEDIIEALKERILGSVASEDVFDPHELDEHGDPKLLVQSGKLIDEEVSTQIDEAGIE
                     KVKIRSVLTCESRRGCCRMCYGRNLATMDMVDMGEAIGILAAQSIGEPGTQLTLRTFH
                     IGGASSRIAEEAERRARASGLVKYTSGLEYADVPVEYEDGTKAVVRIALTRDDENADE
                     E"
BASE COUNT          426 a          995 c          944 g          554 t
ORIGIN      
        1 ctcctcgtcg gcgttctcgt catcgcgggt gagcgcgatg cggaccaccg ccttggtgcc
       61 gtcttcgtat tccaccggca cgtcggcgta ctcgaggccg ctggtgtact tcaccagacc
      121 gctggcccgg gcccgccgct ccgcctcttc ggcgatacgc gacgaggcgc cgccgatgtg
      181 gaaggtccgc agggtcagct gggtgcccgg ctcaccgatc gactgggccg ccaggatgcc
      241 gatggcctcg cccatgtcca ccatgtccat ggtggccagg ttgcggccgt agcacatccg
      301 gcagcagccg cggcgcgact cgcaggtgag caccgagcgg atcttcacct tctcgatgcc
      361 ggcctcgtcg atctgggtcg acacctcctc gtcgatcagc ttgcccgact gcaccagcag
      421 cttggggtcg ccgtgctcgt ccagctcatg cggatcgaac acgtcctccg acgccacgct
      481 gccgaggatc cgctccttga gcgcctcgat gatgtcttcg ccttccttga gggcggagat
      541 ttccaggccc tggatggtcc cgcaatcctc ttcggtgatc gtgacatcct gcgccacgtc
      601 caccagacgc cgggtcaggt agccggcgtc cgcggtcttg agcgcggtgt cggccaggcc
      661 cttccgggcg ccgtgggtcg agatgaagta ctcgaggccg gtcaggccct cgcggaaatt
      721 ggacttgatc gggctctcga tgatttcgcc gatgccgccg gtcagcttct tctgcggctt
      781 cgccatcagg ccgcgcatac cggcgagctg acggatctgg tcgcgcgaac cgcgcgagcc
      841 cgagtcgaac atcatgaaca ccgggttgaa gccaccacgg ctctggcgca tgtggctcac
      901 catcgcctcg gccacgtcgt tgttggcgtg ggtccaggcg tcgatcacct tgttgtaccg
      961 ctcgccgaag gtgatctggc cggtgttgta ggcccgctgg aagcgctgca cccgcttgtc
     1021 ggcttcctcc agcagggtgg ccttctcgcg cgggatctcg agatcctcca ccccgatgct
     1081 gatgccgccc tgggtggcgt agcggaaccc gaactccttg agccggtcga ggaagatcac
     1141 cgtgttggcg agtcccgcct cgcggtagct ctggagcacc agctcggaga gcgccttctt
     1201 ccgcatcagg tcgttcttga agccgtggtt ggccacgacc tggcccggca ggatgctgtt
     1261 gaacagcacc cggcccgccg tggtccggac ccagcgcggc ttgggatcga gcgcctcacg
     1321 cggcggatgg taccagaagc agatcgccgt gtggtagtcg atcgagcggt gcaggagcgc
     1381 catctcgatc tcggccagcg acccgaagta cctcgccttg tcccacgccg ggttggcctt
     1441 gccttccttc ggctcctcgg ccccgcgcgg cagcttggtg aggaagtagc tccccagcac
     1501 catgtcctgg gacggctccg ccaccggccg gccgtcggac ggcttgagga tgttgttcga
     1561 cgaaatcatc agcaggcgcg cttccagctg cgcctcgaac gacagcggca cgtgcaccgc
     1621 catctggtcg ccgtcgaagt cggcgttgaa ggcggcacag accagcgggt gaatccggat
     1681 ggccttgccc tccaccagca ccggctcgaa cgcctggatg cccagccggt gcagcgtcgg
     1741 ggcgcggttg agcagcaccg ggtggtcctg gatgatctct tccaggatct cgtagacctc
     1801 cgggctctcc ttctccacga tcttcttggc ccgcttcacc gtctcggcga tgcccttctc
     1861 caccagcttg tggatgatga agggcttgaa gagttccacc gccatggcct tgggcaggcc
     1921 gcactggtgg agccggagct cggggcccac cacgatgacc gaccggcccg agtagtccac
     1981 ccgcttgccg agcaggttct gacggaaccg gccctgcttg cccttcagca tgtcggagag
     2041 cgacttgagc ggacgcttgc cccggccccg gatcgccttg gagcggcggc cgttgtcgaa
     2101 cagggcgtcc accgcctcct gcagcatgcg cttctcgttc cggaggatga cttccggcgc
     2161 cttgtgctgg atcagcttct ggagccggtt gttccggttg atcacccggc ggtacaggtc
     2221 gttgaggtcg gacgtggcga agcgcccccc gtcgagcggc accagcggcc gcagatcggg
     2281 cggaatcacc gggatgacgt cgagaatcat ccacgccggg ttgttcggca cgtcgccgtt
     2341 ctcgcccgag gtcaggaacg cgtcgacgat cttgagccgc ttgagcatct gcttcttgcg
     2401 atgctggctg gtctcggtcg ccaccgaccc gcggagctcc tcggcgagct tcttcacgtc
     2461 gatgcggttg agcagctccc ggaccgccgg cgcgccgata tcggcccgga aggcgctgtc
     2521 gccgtcttcc cgcgccttgg cgcggagcgc gaggtactcg tcctcgtcga gcaactgatt
     2581 ggcgtccacg tcctggtcgc ccggctcgat gacgatgtag ctcgagtagt agatcacccg
     2641 ctcgaggtca cgcagggtga cgttgagcag gttgcccatg ggcgacggca gcgtcttgaa
     2701 gaaccagatg tgcgccaccg gcaccgacag ctcgatgtgg cccatccgct cgcgccgcac
     2761 cttgctgagc gtgacttcca cgccgcagcg gtcgcagatc acgccccggt agcggatccg
     2821 cttgtacttg ccgcaatggc actcccagtc cttgaccgga ccgaagatcc gctcgcagaa
     2881 caggccgtcc ttctcgggct tgaaggagcg gtagttgat
//
LOCUS       DATIFF010000545         1713 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_70525, whole genome shotgun sequence.
ACCESSION   DATIFF010000545 DATIFF010000000
VERSION     DATIFF010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70525"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1556
                     /locus_tag="VLD58_08060"
     CDS             <1..1556
                     /locus_tag="VLD58_08060"
                     /inference="COORDINATES: protein motif:HMM:NF015644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UPF0182 family protein"
                     /protein_id="HSB54296.1"
                     /translation="RQVLLSPRELNAASLPTRTFINEHLTFTHGMGLTVGPVNQVTSE
                     GLPVLFVKDLPPVSTVSLEVGRPQIYYGELANDYVFVGTRQREFDHPAGEANVYAAYQ
                     GTGGVRVGNLFRRLALAARFGSSNILFSQDITNDSRVLYYRNIVARAKNALPFLQFDR
                     DPYMVVAADGTLKWILDAYTTSDRYPYAERVADGTTYMRNSVKLVIDAYNGSLNAYLS
                     APADPLIRTWARIFPGIFLPMDSMPADLRAHLRYPDDLYRRQARLYATYHMDAPVDFY
                     HREDQWQIPVESEAEGAVPFMRHIVMRLPDEKKAEFIYMVPFTPRGKDNLAAWMVARN
                     DGDAYGKLRVYQLSRQSLVFGPQQIENRINQDTEISRQVSLWDQGGSKVIRGDLLVIP
                     IEQSLLYVQPLYLQAEGGRIPELKRVVVAYQNQVVMEETLDAGLARLFGGSAAARTGP
                     AAAGPGPAAAATGSATSDAEIRALVAEARDHYQAAVAAQRAGDWARYGEEIRRVGELL
                     ERLAARGGR"
BASE COUNT          270 a          609 c          573 g          261 t
ORIGIN      
        1 accgccaggt cctgctctcg ccgcgggagc tgaacgcggc ctcgctgccg acccgcacct
       61 tcatcaacga gcacctgacc ttcacgcacg ggatgggcct caccgtgggc ccggtgaacc
      121 aggtgaccag cgagggtctg cccgtcctgt tcgtgaagga cctgccgccc gtatcgacgg
      181 tgtcgctcga ggtcggccgg ccccagatct attacggcga gctggccaac gactacgtgt
      241 tcgtgggcac ccgccagcgc gagttcgatc acccggcggg cgaggcgaac gtctacgccg
      301 cctaccaggg caccggcggc gtccgggtgg ggaacctctt ccgccgtctg gcgctcgccg
      361 cccgattcgg ctcgtccaac atcctgttct cccaggacat cacgaacgac agccgggtgc
      421 tctactatcg caacatcgtg gcccgggcga agaacgcgct gccgtttctc cagttcgacc
      481 gtgaccccta catggtggtc gcggcggacg ggacgctcaa gtggatcctc gacgcctaca
      541 ccacgtccga ccgctatccc tacgccgagc gggtcgccga cggcacgacc tacatgcgga
      601 acagcgtcaa gctcgtcatc gacgcctaca acggctcgct caacgcctac ctgagcgcgc
      661 cggccgatcc gctgatccgg acctgggccc gcatcttccc cgggatcttc ctgcccatgg
      721 acagcatgcc ggccgacctg cgcgcgcacc tccgctatcc cgacgacctc taccgacgcc
      781 aggctcgcct ctacgcgacc taccacatgg acgcgccggt ggacttctac caccgggagg
      841 accagtggca gatcccggtc gaatccgagg ccgaaggggc ggtgcctttc atgcggcaca
      901 tcgtcatgcg gctgccggac gagaagaagg ccgagttcat ctacatggtc ccgttcacgc
      961 cgcgggggaa ggacaacctg gccgcgtgga tggtggcgcg gaacgacggc gacgcctacg
     1021 gcaagctccg ggtgtaccag ctctcgcggc aaagcctcgt gttcggcccg cagcagatcg
     1081 agaaccggat caaccaggac accgagatct cgcggcaggt ctcgctctgg gaccaggggg
     1141 gatcgaaggt gatccgtggc gacctgctgg tcattccgat cgagcagtcg ctgctctatg
     1201 tacagccgct ctacctccag gcggaaggcg gccggattcc cgagctcaag cgggtggtcg
     1261 tggcatacca gaaccaggtc gtgatggagg agaccctgga tgccgggctc gcccggctct
     1321 tcggcggatc ggcggcggcg aggaccgggc cggcggcggc cggccccggc ccggcggcgg
     1381 ccgcgaccgg ctcggcgacg agcgatgcgg agatccgcgc gctggtggcg gaggcgcggg
     1441 atcactatca ggcggcggtg gcggcgcagc gggctggcga ctgggcgcga tacggcgagg
     1501 agatccgccg cgttggcgag ctgctcgaac gcctggcggc gcggggaggt cgctgagccg
     1561 gccctctccc ggccgacccg gccccaggtt gcgcagtcgc agcggcttgc ggagactctc
     1621 cgccagcagg aaggtccgct tccaaggtct tctcccgccc ctgtggccct ggagttgcat
     1681 ctccgggcgt tgcccattcc gccacccgac ctc
//
LOCUS       DATIFF010000546         1412 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1607869, whole genome shotgun sequence.
ACCESSION   DATIFF010000546 DATIFF010000000
VERSION     DATIFF010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1412
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1607869"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..288
                     /locus_tag="VLD58_08065"
     CDS             <1..288
                     /locus_tag="VLD58_08065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54297.1"
                     /translation="AVARLQAAWPTLVLVHTPLHASWLNQIEISFSIVQRKILTPDDF
                     PSLAAVEERLLRFQEHFAAIARPFEWRFTRYDLLALLDRLGERNRALPLAA"
     gene            complement(357..878)
                     /locus_tag="VLD58_08070"
     CDS             complement(357..878)
                     /locus_tag="VLD58_08070"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSB54298.1"
                     /translation="MDESGFMLQPVVRRTWAPRGQTPVLRQWDRRDRLSAISALTLAP
                     RRRRFGLYWMVHRHNIRSTNVLQFLRALSRHLPHGFTLVWDRSQPHRAATVRHWLAAR
                     TPRIVVEWLPAYAPDCNPAEQVWGHTKYGDLANFTPADLDHLEEALVTSFTDTRGQRD
                     LLAAFFRAAGVRI"
     gene            complement(892..1374)
                     /locus_tag="VLD58_08075"
     CDS             complement(892..1374)
                     /locus_tag="VLD58_08075"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HSB54299.1"
                     /translation="MRPFGSPADLEARRRRAVALLDTGLGVREVARQIGCSPASVSRW
                     QAEVRSRGPDGLRAKPAPGRPRRLTQRQRARVLKLLLQGATAHRFSTDLWTLPRIATV
                     IARTYGVQYHPAHVWKILRGEGWSCQKPERRAKERDESTIQRWRTERLPHIKKRPAGR
                     "
BASE COUNT          223 a          468 c          480 g          241 t
ORIGIN      
        1 gcggtcgcgc gcctccaggc cgcctggccg acgctggtcc tggtgcacac gccgctccac
       61 gccagttggc tcaaccagat cgagatctcc ttctccatcg tccagcggaa gatcctgacg
      121 ccggatgatt tcccgtccct cgccgccgtc gaggagcggc tcctccggtt ccaggaacac
      181 ttcgcagcga tcgctcggcc gttcgagtgg cggttcaccc ggtatgatct gctcgccctc
      241 ctcgaccgat tgggggagcg aaaccgggcg ttgcccctcg cggcgtaatt ggggaatacg
      301 tcactgtaat tgcggcccgg agtacttatt gatcattgca taagtaatga tacacatcag
      361 atccgcacac cggcggcccg gaagaacgcg gcaagaagat cacgctggcc gcgagtgtcg
      421 gtgaacgagg tgaccagcgc ctcttcgaga tgatcgagat ccgccggggt gaagttggcc
      481 aggtccccgt atttggtgtg gccccagacc tgttccgcag ggttgcagtc cggggcatac
      541 gccgggagcc actccacgac gatccgcggg gtgcgagccg cgagccaatg ccggacggtg
      601 gccgcccggt ggggttggct ccgatcccag acgagcgtga acccgtgcgg caggtggcgg
      661 ctgagggccc gcaggaactg gaggacgttc gtactccgga tgttgtggcg atgtaccatc
      721 cagtagagtc cgaaccggcg gcggcggggt gccagcgtga gcgcactgat ggccgagagc
      781 cgatcccggc gatcccattg ccggagcacc ggcgtctggc cccgcggggc ccaggtgcgg
      841 cgcaccaccg gctggagcat gaacccactt tcatccagga agacgagggc tctaccggcc
      901 cgccgggcgt ttttttatat gcggcaaccg ctcggtccgc caccgctgga tcgtgctctc
      961 gtcccgttcc ttggcccggc gctccggctt ctgacaactc cagccctcgc cgcggaggat
     1021 cttccagacg tgggcagggt gatactggac gccgtaggtg cgggcgatga ccgtggcgat
     1081 ccgcggcaag gtccagagat cggtgctgaa cctatgggcc gtggcgccct ggaggagtaa
     1141 tttgagcacc cgcgctcgct gccgctgggt caaccgccgg ggccgccccg gtgccggttt
     1201 cgcccgcaac ccatcggggc cccggctccg gacctcggcc tgccagcggc tgaccgaggc
     1261 gggcgagcag ccgatctgcc gggcgacttc gcgcaccccg agccccgtgt cgaggagggc
     1321 gacggcccgg cggcgccgcg cttccagatc cgcggggctg ccgaatggtc tcatgcatgg
     1381 gagagtacac tcgttccttt atttaggcaa ga
//
LOCUS       DATIFF010000547         1207 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_224874, whole genome shotgun sequence.
ACCESSION   DATIFF010000547 DATIFF010000000
VERSION     DATIFF010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224874"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            162..>1207
                     /gene="istA"
                     /locus_tag="VLD58_08080"
     CDS             162..>1207
                     /gene="istA"
                     /locus_tag="VLD58_08080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003414864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HSB54300.1"
                     /translation="MLSVEDWAEIRRLYRAEGLPIKAIARELGISKNTVKSALACDLP
                     PKYERPQRGSIVDKVEPRIRELLQAYPRMPATVIAERIGWTRSIRVLSARVAELRPVY
                     LPPDPASRTAYAAGEIAQCDLWFPPIELPVGFGQTRKPALLPVLTMICAYSRWLLAML
                     IPSRRAEDLFAGWWQLIAGLGAVPRALVWDGEGAIGRWRAGRAELTAECQAFRGVLAA
                     KVIICRPADPEAKGLIERAHDYLERSFLPGRHFASPADFNAQLTDWLALVNTRTRRVL
                     GCAPTDRIGADRAAMLALPPVAPATGWCSSLRLPRDHYVRLDSNDYSVHPTGIGRRVL
                     VRADLDRVQAFCDG"
BASE COUNT          172 a          352 c          455 g          228 t
ORIGIN      
        1 tactggagtg ttaaagcgaa caagggtgcg ccgggggtgg acgggccgtc gatcgacgat
       61 tttgtcggcg gcaggtgaaa actgaccccg gcgcggcaac cgaattttga ccccctggtc
      121 cggtggcctg gctttacccg agccaggagg accagaaggg aatgttgtca gtggaggatt
      181 gggcagagat tcgtcggctg tatcgggcgg aggggttgcc gatcaaggcg atcgcccggg
      241 agttggggat aagcaaaaac accgtgaagt cggcgctggc ctgtgatttg ccgccgaagt
      301 atgaacggcc acaacgtggt tcgattgttg acaaggtcga gccgcgcatc cgtgaactgt
      361 tgcaggcgta tccgcggatg ccggcgacgg tgattgccga gcggatcggc tggacccgct
      421 cgattcgggt gctctcggcg cgggtggccg agctgcgccc ggtgtatttg ccgccggatc
      481 cggcgtcgcg gaccgcgtat gccgccggtg agatcgccca gtgcgatctg tggttcccgc
      541 ccattgagct gccggtgggg ttcggccaga cccgcaagcc ggcgttgttg ccggtactga
      601 ccatgatctg cgcctattcg cgctggctgt tggcgatgtt gatcccgagc cggcgggccg
      661 aggatctgtt cgccgggtgg tggcagctga tcgcgggtct gggggcggta ccgcgggcgc
      721 tggtgtggga cggtgagggc gcgatcgggc gctggcgggc cggacgggcc gagctgaccg
      781 cggagtgcca ggcgtttcgc ggcgtgctgg cagccaaggt gatcatctgc cggccggctg
      841 acccggaagc caaagggctc atcgagaggg cccacgacta cctggagcgc tcgtttctgc
      901 cggggcggca ctttgcctcg ccggccgatt tcaacgccca gttgaccgac tggctggcgc
      961 tggtcaacac ccgcacccgc cgggtgctgg gctgtgcgcc caccgatcgc atcggcgcgg
     1021 atcgcgccgc gatgcttgcg ttgccgccgg tggccccggc caccgggtgg tgttcctcgc
     1081 tgcgcctgcc tcgggatcac tatgtgcgtt tggattccaa cgactactcg gtgcatccaa
     1141 ccgggatcgg gcgccgggtt ttggtgcgcg ccgatctgga ccgggtgcag gcgttctgcg
     1201 atggtga
//
LOCUS       DATIFF010000548         5030 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_377736, whole genome shotgun sequence.
ACCESSION   DATIFF010000548 DATIFF010000000
VERSION     DATIFF010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5030
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_377736"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..945)
                     /locus_tag="VLD58_08085"
     CDS             complement(<1..945)
                     /locus_tag="VLD58_08085"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HSB54301.1"
                     /translation="MTSLSSFGSPADPGVTAEPVRGAPWSNEAEQAVLGAMLLDQDAA
                     LRAVELLDDSLFYKEGHRRLFRAMRRLVERRVVIDHVTLRDELERRSELEIAGGEVYL
                     AELIDTAVTAANLDAHAGIVREKAVLRQLIENATAIVSQAYQGTQPASELLDEAESRI
                     FQISQYRKAEGFSRLKEMLWPTMERIEKLHQAGKQVTGVPSGFKDLDDMTTGFQANDL
                     VIVAARPSMGKTAFCLNVAAHAASTGVGTAIFSLEMSKESLVQRLLCAEARVDSQRVR
                     RGSLSDTDFTMLARAAGVLSSCPIWIDDTPALTLLEMRS"
     gene            complement(1237..2058)
                     /locus_tag="VLD58_08090"
     CDS             complement(1237..2058)
                     /locus_tag="VLD58_08090"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR00758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HSB54302.1"
                     /translation="MHPDLARYLRQQVELGGEEAYIEKEPMASKRMEFPLQTQAPTVV
                     EAVIRETGPAADVAMPKWRKDAPPIPGPGLQIIPPAPSLLGDGVSGLESLAAVATMIS
                     GCTRCVLCQTRTNTVPGEGNPTARLMCIGEGPGATEDEKGRPFVGAAGQLLDQILAAI
                     ECPRESVFIANIVKCRPPQNRKPLPDEATNCLPYLHRQIALVRPKVLIALGSTAAEWL
                     LNTKQSLGNLRGKVHRYGDIPLVVTYHPAALLRNPNWKKPTWDDVRIARQLLDQG"
     gene            complement(2048..3244)
                     /gene="coaBC"
                     /locus_tag="VLD58_08095"
     CDS             complement(2048..3244)
                     /gene="coaBC"
                     /locus_tag="VLD58_08095"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HSB54303.1"
                     /translation="MWSGRHVVVGVSGGIASYKSCVLVRRLAEAGARVDVILTEGAAE
                     FVRPLTFEALSGRPVLTSLWTRDAALQHVRLAQVPDLIIVAPATAHLLARAAQGLGDD
                     LLTTLLLARTSPVLFAPAMNDEMYANPATQANLAALARRGAAFVGPEVGSLAEGPSDR
                     PGRMSEPETILAHAARLLGTRAPLAGKQVLITAGPTREAIDPVRVVTNRSSGRMGYRL
                     AEAAWERGAEVTLVSGPVDLAAPVGVRVVRVESTAQLEAAVREHLPASDVLIMAAAPA
                     DYRPAEPSSSKRPRQEGAANLVMEPTADILAATVGLRRKSSVIVGFALETGNAVEKGK
                     AKLARKSLDLIVVNDALEPGAGFEVDTNRVVIVDREGKSRDVPLASKREVADTILDTI
                     EARLAP"
     gene            complement(3247..3459)
                     /locus_tag="VLD58_08100"
     CDS             complement(3247..3459)
                     /locus_tag="VLD58_08100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54304.1"
                     /translation="MKIYTPTEAAKQAGNKYLGVLVAAKFARHINELPKERLAEKTTK
                     LTTQALEALCVGDLEYKISRRRRSEA"
     gene            complement(3482..4117)
                     /gene="gmk"
                     /locus_tag="VLD58_08105"
     CDS             complement(3482..4117)
                     /gene="gmk"
                     /locus_tag="VLD58_08105"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HSB54305.1"
                     /translation="MKPFLLVLSSPSGGGKTSIARRLLERRDDVGYSISATTRAKRTG
                     EEHGRDYWFLDPAEFDRRVETGDFVEHASYNGKSYGTLRSEVERLFRAGKVVVLDIEV
                     AGARQVKERYPDAVLVFVLPPSGAELVRRLKGRQTEGPEALARRMQIAVEELAAVTEY
                     DYVVVNDELNRAVGDVEAILSGEIRRTTRRDGLPAKVEAIRAEIRAEAAKL"
     gene            complement(4114..>5030)
                     /locus_tag="VLD58_08110"
     CDS             complement(4114..>5030)
                     /locus_tag="VLD58_08110"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HSB54306.1"
                     /translation="FAAFPDSRNGATVPYSMTGFGAADGPVGGGRVRIEIRTVNHRHF
                     NPSLKLSPEFAALEGEVRERLRKDFDRGHIAVSVRWTEFPERQAAGFSVSVERARSVI
                     VALTELKKALGLPGDIDLATVLRQPDVIVAPKEEEPQIAWSELEPVVAQAIADCKAMR
                     RREGQVLADELLHRLDRLEAAGKVVATRAPERLIRERDRLRQNVTLLMEGRQVDEQRL
                     AQELAFAADKLDITEELVRFAAHIAACRQALAADAPSGKQLGFLAQELGREVNTMGSK
                     GNDAEILQQVILMKGELEKFREQLENLE"
BASE COUNT          775 a         1748 c         1646 g          861 t
ORIGIN      
        1 ggagcgcatc tccagcaggg tcagcgccgg ggtgtcgtcg atccagatcg ggcagctgga
       61 cagcacgccg gccgcccgcg ccagcatcgt gaagtcggta tcggacagcg acccgcgccg
      121 tacccgctga ctgtccaccc gcgcctcggc gcagagcaac cgctgcacca gcgactcctt
      181 gctcatttcg agcgagaaga tggcggtacc gaccccggtg ctcgcggcat gcgccgcgac
      241 attgaggcag aacgctgtct tacccatcga ggggcgggcc gcgacgatga cgaggtcgtt
      301 ggcctggaat cccgtcgtca tgtcgtccaa atctttgaag ccgctgggca cgccggtaac
      361 ctgtttgccg gcctgatgga gcttttcgat gcgctccatc gtgggccaga gcatctcctt
      421 gaggcgggag aagccttcgg ccttgcggta ctgcgagatc tggaagatcc gcgactccgc
      481 ctcgtcgagc agctcggagg cgggctgggt tccctggtag gcctgggaaa cgatcgcggt
      541 ggcgttctcg atgagctggc gcaggaccgc cttctcgcgc acgatgcccg cgtgggcgtc
      601 gaggttggcg gcggtaacgg cggtgtcgat cagctcggcg agatagacct cgcccccggc
      661 gatctccagc tcgctccggc gctccagctc gtcgcgcagg gtgacgtgat cgatgaccac
      721 ccggcgttcg accagccgcc gcatcgcccg gaagaggcgc cggtggcctt ccttgtagaa
      781 gaggctgtca tcgaggagtt cgacggcgcg gagggcggca tcctgatcga gcagcatggc
      841 gccgagcacg gcctgctctg cttcgttgct ccagggcgcg ccgcgtaccg gctcggcggt
      901 cactccggga tcggcaggag aaccaaacga agagagcgaa gtcatgatcc ggcggtgatt
      961 cggctgaaga aggagggcgc cgcgggggcg aagaccgaac tttatcgggg tagtaacgcg
     1021 atcgcaacaa aaggattgta gcaggagtta ttcacgctca tccacaggct gaccacattc
     1081 cacaccggcg tggaaaaccc cagcttcacg cccgccttca ccccgcagac atcaacacag
     1141 agacacagag ggcacagaga acgacaggag aaaagcagga cgtactcttg cttttctctg
     1201 tgtccgctgt gcctctgtgt tgaaattcct ccgtagtcaa ccttgatcga gcagctgccg
     1261 cgcgatccgc acgtcatccc aggtcggctt cttccagttg ggattccgga gcagcgccgc
     1321 cgggtgatac gtcaccacca gcgggatgtc cccgtagcga tgcactttcc cgcggaggtt
     1381 cccgaggctc tgtttggtgt tgagcagcca ctcggcggcc gtgcttccga gtgcgatcag
     1441 caccttgggc cggaccaggg cgatctggcg gtggaggtac ggcaggcaat tggtcgcttc
     1501 gtcgggaagt ggtttccggt tctgcggcgg ccggcacttc acgatgttgg cgatgaagac
     1561 cgattcccgc gggcactcga tggcggcgag aatctggtcg agcagctggc cggcagcgcc
     1621 gacgaacggc cggcccttct cgtcctccgt cgcccctgga ccttcgccta tgcacatgag
     1681 ccgggcggtg gggttcccct cgcccggcac ggtattggtg cgggtctggc acagcacgca
     1741 cctggtgcac ccgctgatca tggtggcgac ggcggcgagt gactcgaggc cgctcacccc
     1801 gtctccgagc aggctcggcg ccgggggaat gatctggagg cctgggccgg ggatcggtgg
     1861 cgcatccttc cgccacttcg gcatggcgac gtcggcggcc gggccggtct cgcgtatcac
     1921 agcttccacg accgtcgggg cctgggtctg gagcggaaac tccatgcgct tggaggccat
     1981 tggctccttc tcgatgtatg cctcttcccc accgagttcc acctgctgcc gcagatagcg
     2041 ggcgaggtca gggtgcaagg cgggcctcga tggtatccag aatcgtgtcg gcgacttcgc
     2101 gcttgctggc gagtggcacg tcgcggctct tgccttcgcg gtccacgatg acgacccggt
     2161 tggtgtcgac ctcgaagccg gcccccggct cgagcgcatc gttcaccacg atcaggtcga
     2221 gcgatttccg ggccagcttg gctttgccct tctccaccgc gttgccggtc tcgagcgcga
     2281 agccgacgat gaccgagctc ttcctccgga gaccgacggt ggccgcgagg atgtccgccg
     2341 tcggttccat cacgaggttc gcggctccct cctgacgggg acgcttgctg ctcgagggct
     2401 ccgcggggcg atagtctgcc ggcgccgcgg ccatgatgag gacatcggac gcggggagat
     2461 gctcccgcac cgcggcctcg agctgtgcgg tcgactccac ccgcaccacc cgcaccccta
     2521 ccggcgctgc gagatcgacc ggcccgctca ccagcgtcac ctccgcgccc cgctcccagg
     2581 ccgcttcggc cagccggtag cccatgcggc cactcgaacg attggtcacc acccgcaccg
     2641 gatcgatggc ctcgcgggtg gggcccgccg tgatcagcac ctgcttaccg gcgagtggcg
     2701 cccgggtccc gagcagccgg gcggcatggg ccaggatcgt ctcgggttca ctcatccggc
     2761 cgggccggtc ggacgggcct tcggccaacg agccaacctc cggtccgacg aacgccgcac
     2821 cgcgccgagc cagcgcggcg aggttcgcct gggtggcggg gttggcgtac atctcgtcgt
     2881 tcatcgcggg agcaaacaga accgggctgg tacgcgcgag gaggagtgtc gtgaggagat
     2941 cgtcacccag cccctgcgcc gcccgggcca gcaggtgggc cgtggcgggg gcgacgatga
     3001 tcaggtcagg tacctgggcc agccggacgt gctgtagcgc ggcgtccctg gtccagagac
     3061 tggtgagcac gggccgcccg gagagtgctt caaatgtgag gggccgcacg aactcggcgg
     3121 ccccctccgt gagaatcaca tccacccggg cacccgcttc cgcgagccgc cggaccagga
     3181 cgcagctctt atagctggcg atcccgcccg acacgcccac gaccacgtgc cggcccgacc
     3241 acacggtcag gcctcggaac ggcgccggcg ggaaatcttg tactcgagat cgcccacaca
     3301 gagcgcctcg agcgcctggg tggtgagctt ggtggtcttc tccgccaacc gctccttggg
     3361 gagctcgttg atatggcggg cgaacttcgc cgcgaccagg acgccgaggt acttgttgcc
     3421 cgcctgcttg gcggcttcgg tcggggtgta gatcttcatg tcaccagctc catcctgagg
     3481 gttacagctt tgcggcttcc gcccgaatct cggcgcggat cgcctccacc ttcgccggta
     3541 gtccatcgcg ccgagtggtc cgtcggatct ctccgctcag gatcgcctcg acgtcgccca
     3601 ccgcgcggtt gagctcgtcg ttcactacca cgtaatcata ctcggtcacc gcggccagtt
     3661 cctcgaccgc gatctgcatc cgccgggcga gtgcctccgg cccttcggtc tgacgcccct
     3721 tgagccgccg gaccagctcc gccccgctgg gcgggagcac aaacacgagg acggcgtcgg
     3781 ggtaccgctc cttcacctgc ctggcgccgg ccacctcgat gtcgagcact actaccttgc
     3841 cggcccggaa gagccgttcg acctcgctcc gaagggtgcc gtaactcttc ccgttgtagc
     3901 tggcatgctc cacgaaatcg ccggtttcca cccgccggtc gaactccgcc gggtcgagga
     3961 accagtaatc ccggccatgc tcctccccgg tgcgcttggc ccgggtggtg gccgagatgg
     4021 agtagcccac gtcgtcgcgc cgctcgagca gccgccgggc gatggaggtc ttgccgccgc
     4081 ccgaaggcga cgagagcacc agcaggaacg gcttcactcg agattctcga gctgctcgcg
     4141 gaacttctcc agctccccct tcatgaggat cacctgctgg agaatctcgg cgtcgttgcc
     4201 cttcgacccc atcgtattca cttcgcggcc cagctcctgg gccaggaatc cgagctgctt
     4261 gcccgagggc gcatcggcgg cgagagcctg gcggcaggcc gcgatatgcg ccgcgaaccg
     4321 caccagctcc tcggtgatgt ccagcttgtc ggcggcaaag gccaactcct gcgccagcct
     4381 ctgctcgtcc acctgccggc cttccatcag gagggtgacg ttctgccgca ggcggtcccg
     4441 ctcccggatc agccgctcgg gggcccgcgt cgccaccact ttgcccgccg cctccagccg
     4501 gtcgagccgg tggagcagct cgtcggccag cacctggcct tcccggcgcc gcatcgcctt
     4561 gcagtcggca atcgcctggg ccacgaccgg ctccagctca ctccaggcga tctgcggctc
     4621 ttcctccttc ggggccacaa tcacgtccgg ctggcggagc accgtggcca gatcgatgtc
     4681 gcccggaagc cccagggcct tcttgagctc cgtgagcgct acgatcaccg aacgggcccg
     4741 ctcgacactg acgctgaacc cggccgcctg ccgctccggg aactcggtcc atcggacact
     4801 caccgcaatg tggccgcggt cgaagtcctt gcggagccgc tcccgtacct ccccttccag
     4861 cgccgcgaac tcgggcgaga gcttgagaga cggattgaaa tggcggtggt tgacggtgcg
     4921 gatctcgatc cggacccgac ctccccccac cggtccgtcc gccgccccga accccgtcat
     4981 gctatagggc acagtcgctc cgttccggga gtctgggaaa gccgcgaaat
//
LOCUS       DATIFF010000549         1512 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1608425, whole genome shotgun sequence.
ACCESSION   DATIFF010000549 DATIFF010000000
VERSION     DATIFF010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1608425"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1120
                     /locus_tag="VLD58_08115"
     CDS             <1..1120
                     /locus_tag="VLD58_08115"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HSB54307.1"
                     /translation="AMWINPNNHALDGGRASSAMEREAVAELARMVGWETHLGHLAGG
                     GTMANLEALWVAGQLRPGGLVVASSQAHYTHARISGVLGLRFQSVATDARGRMDPEAL
                     ARILTHEKVAAVVATLGTTATGAVDPLPELLPLRDRYDFRLHVDAAYGGYFRLAANLG
                     PEARAAFDRVAEADSIVIDPHKHGLQPYGCGCILFREPSIGQLYHHDSPATYFSSAEL
                     HLGQISLECSRPGAAAVALWATQRLLPPVPGGRFAAMLERSRAAALELHRRLAADHRF
                     IASLNPQLDIVVWAVRAPTASDASRLARRVFAEAARQNLHLAVAELPADLVDADHALD
                     RDQPTVTCLRSVLMKPEHLDWLPDLWGALDRATGVVLE"
     gene            complement(1263..>1512)
                     /locus_tag="VLD58_08120"
     CDS             complement(1263..>1512)
                     /locus_tag="VLD58_08120"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Rid family hydrolase"
                     /protein_id="HSB54308.1"
                     /translation="EETRQTLENIRTVLEAAGSSLDRVFKCTVFLADIAEYGPMNDVY
                     ATFFPTDPPARSTIAGSGLALGARVEIECMAVAGGGGR"
BASE COUNT          229 a          537 c          502 g          244 t
ORIGIN      
        1 ggcgatgtgg atcaacccca acaaccacgc actggacggc gggcgggcca gctcggcgat
       61 ggaacgggag gcggtggccg aactggcccg gatggtcggc tgggagaccc acctcgggca
      121 cctcgccggc ggtggcacca tggccaatct cgaggcgctg tgggtggccg ggcagctccg
      181 ccccggcggg ctggtcgtcg catccagcca ggcccactac acccatgcac ggatcagcgg
      241 cgttctcgga ctccgattcc agagcgtggc gacggatgct cggggtcgga tggatccgga
      301 agccctcgca agaatcctca cacacgagaa ggtcgcagcc gtggtcgcca cccttggcac
      361 aaccgccacg ggcgcggtgg atccccttcc ggagctgctc ccgctgcgtg atcggtacga
      421 tttccggctg cacgtggatg ccgcctatgg cgggtacttc aggctggcgg cgaatctggg
      481 gccggaggcc cgcgcagcgt tcgaccgggt ggccgaggcg gattcgatcg tgatcgaccc
      541 gcacaagcac gggctccagc cctacggctg cggttgcatc ctgttccgcg agccctccat
      601 cggccagctc taccaccacg actcccccgc cacctacttc agctcggctg agctgcacct
      661 gggtcagatc agcctggagt gctcccggcc cggggccgcg gcggtggcgc tctgggccac
      721 ccagcgcctg ctgccgcccg ttcccggcgg gcgcttcgcc gcaatgctgg aacgatcccg
      781 agccgccgcg ctcgagctgc accgccgcct cgcggcggac caccgcttca tcgcatctct
      841 gaatccccag ctcgatatcg tggtctgggc ggtgcgcgcg ccgacggcct ccgacgcgtc
      901 ccggttggca cggcgagtat tcgccgaagc ggcgcgacag aatctgcacc tggcggtggc
      961 cgagcttccc gccgacctgg tggacgcgga ccacgcgctc gaccgggacc agcccacggt
     1021 cacctgcctc cggtccgtgc tgatgaagcc ggaacatctc gactggctac ccgatctctg
     1081 gggggcgctg gatcgggcga cgggagtagt gctcgagtaa ggctgtgggg gctatgggct
     1141 atgggctatg ggaggaccgc tgtgcgctat gcgctattcg ctgtgcgctg tgcgctagcg
     1201 tatggcgcat agcgtatagc gtacagccca tagcccatag cccatagccc atagcccacc
     1261 acctaccgcc cccctccccc cgccaccgcc atgcactcga tctcgacccg cgcgcccagc
     1321 gcgaggccgc tcccggctat cgtggaccgg gcggggggat cggtgggaaa gaacgtggca
     1381 tacacgtcgt tcatgggccc gtattcggcg atgtccgcca gaaacacggt gcacttgaat
     1441 acccgatcga gcgagctgcc agccgcctcc agcaccgtgc ggatgttctc cagcgtctgt
     1501 cgggtttctt cc
//
LOCUS       DATIFF010000550         2275 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2223698, whole genome shotgun sequence.
ACCESSION   DATIFF010000550 DATIFF010000000
VERSION     DATIFF010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2275
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2223698"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="VLD58_08125"
     CDS             complement(<1..195)
                     /locus_tag="VLD58_08125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54309.1"
                     /translation="MTDLAAVLAHLEGQHDRILGELIEFAAIPSISTDPAHAADCAAA
                     AEWVAGKLRAAGPFTVRIIPT"
     gene            complement(192..959)
                     /locus_tag="VLD58_08130"
     CDS             complement(192..959)
                     /locus_tag="VLD58_08130"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HSB54310.1"
                     /translation="MNLDFTGRTAMVTGAAHGFGRAIALAFARRGAAVWACDVIAEEL
                     AETRELCRAAGGSCTTGTVDVRDRDAVSRFVADASRAAGCVHVLVNNAGGVLGQVGRP
                     LEEVTPAEWQAIFDVNVTGAFHCAQAVAPGMKAARFGRIVNISSGAGLGISLTGIQAY
                     AAAKAAQIGLTRQLAHELGPWGITVNNVAPGFVRSNPTTERQWQSYGAERQQALIEGI
                     ALKRLGTPEDIAAGVLFFASDSAGWVTGQVLSIDGGK"
     gene            complement(956..2002)
                     /locus_tag="VLD58_08135"
     CDS             complement(956..2002)
                     /locus_tag="VLD58_08135"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: protein motif:HMM:TIGR00745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008677 - 2-dehydropantoate 2-reductase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HSB54311.1"
                     /translation="MGWPIVAPPKGRCLVWGAGAIGGTLGAFLARAGHEVTLVDAVPE
                     HVAAITRSGLRITGPIAEFSTPLPAFTPDTLSGTWDTIILATKAHHTLAATRSLVPHL
                     APAGCVVSAQNGLNELEIAEVVGEGSTVGAFVNFGADYLEPGVVFYGGRGAVVVGEAF
                     GPPDARLSPRALRIRDQWRDFDERATATANIFGYLWAKEAYGAMLFATALTNDSIADC
                     LAAAEYRPIYIGLAREILAVARSQGVTPEAFDGFDPAAYLPDAPAEAASRSLDALVAH
                     NRKSAKTHTGIWRDLAIRKRQTEVDAQLGIIVRLGAAAGVPTPLTARVVTLIQEIERG
                     IRPLARENLEALAS"
     gene            complement(1984..>2275)
                     /locus_tag="VLD58_08140"
     CDS             complement(1984..>2275)
                     /locus_tag="VLD58_08140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54312.1"
                     /translation="KTWARVQAIDPVASHGSWMESFPWTRLPGIDLPRTQRPMVDIDK
                     VRLLDPVAMRAYIPDGNYGGLYQRSDEEMLSLWQVAVEETRALLDGPWGGPS"
BASE COUNT          350 a          786 c          811 g          328 t
ORIGIN      
        1 ggtggggatg attcgcaccg tgaacggccc cgccgcccgg agctttccgg ccacccattc
       61 ggcggcggcg gcgcagtcgg cagcgtgggc cggatcggtg ctgatgctgg ggatggcggc
      121 gaactcgatc agctccccga ggatccggtc gtgctgtccc tcgagatggg ccaggaccgc
      181 ggcgagatcg gtcacttgcc accatcgatc gagaggacct ggcccgtcac ccagccggcc
      241 gagtccgacg cgaagaacag cacgccggcg gcgatatcct ccggcgtgcc gaggcgtttg
      301 agcgcaatgc cttcgatgag tgcctgctgc cgttcagcac cataggattg ccactgccgc
      361 tcggtggtcg gattcgagcg gacaaagccg ggtgccacat tgttgaccgt gatgccccag
      421 ggtcccagct cgtgggccag ctgtcgggtc agcccgatct gcgcagcctt ggcagcggca
      481 taggcctgga tccccgtcag gctgatcccg agtccagcgc cgctcgagat attgacgatg
      541 cgaccgaacc gtgccgcctt catgcccggg gcgaccgcct gggcgcagtg gaacgcgccg
      601 gtcacgttca cgtcgaagat ggcctgccac tccgccggcg tgacctcctc gagcggccgg
      661 cccacctggc cgagcacgcc gccggcattg ttcaccagta catgcacgca tcctgcggcc
      721 ctggaagcgt cggccacgaa gcgactcacg gcgtcgcggt cgcgcacatc cacggtgccg
      781 gtcgtgcagc tgccacccgc ggcccggcag agctcacggg tctccgccag ctcctccgcg
      841 atcacatcgc aggcccacac cgccgcaccg cgccgggcaa aggcgagcgc aatcgcgcgc
      901 ccgaacccgt gggccgcgcc ggtgaccatc gcggtgcggc cggtgaagtc gagattcacg
      961 aggccagcgc ctcgagattc tcgcgggcca gggggcggat gccgcgttcg atctcctgga
     1021 tcagcgtgac cacccgtgcc gtcagcgggg ttgggacccc tgccgccgcg ccgaggcgca
     1081 cgatgatccc gagctgggca tcgacctccg tctgccgctt gcggatcgcg aggtcgcgcc
     1141 agatacccgt gtgggtcttg gcggacttgc ggttgtgcgc gaccagcgcg tcgagggagc
     1201 gggaggccgc ctcggccggg gcgtcgggca ggtaggccgc gggatcgaat ccgtcgaacg
     1261 cctcgggcgt cactccctgc gaccgggcga ccgcgaggat ctcgcgcgcc aggccgatgt
     1321 agatcgggcg atactccgcc gccgccaggc aatcggcgat cgagtcgttg gtcagggctg
     1381 tggcgaacag catcgccccg taggcttcct tggcccagag gtagccgaag atgttggcgg
     1441 tggcggtggc ccgctcgtcg aagtcgcgcc actggtcccg gatccggagc gcccgggggg
     1501 agagccgcgc gtcgggtggc ccgaacgcct cgcccaccac caccgccccg cgcccgccgt
     1561 agaagaccac gcccggctcg aggtaatcgg ccccgaagtt gacgaacgcg cctaccgtgc
     1621 tcccctcacc aaccacctcg gcgatctcca gctcattgag gccattctgc gccgagacca
     1681 cgcatccggc gggagcaagg tgggggacga gggaccgcgt ggcagcgaga gtgtggtgcg
     1741 ccttggtggc gaggatgatc gtgtcccagg tccccgacag ggtatcgggc gtgaaggcgg
     1801 gcagtggggt cgagaactcg gcgatcgggc cggtgatgcg gagcccggag cgggtgatgg
     1861 ccgcgacatg ctcggggacg gcatcgacca gagtcacctc gtgcccggcg cgcgcgagga
     1921 aggcgccgag cgttccgccg atagcgcccg cgccccagac gagacagcgg cccttcggcg
     1981 gggctacgat gggccacccc acggcccgtc cagcagtgcc cgggtctctt ccacggcgac
     2041 ctgccagagg gagagcatct cctcgtcgga ccgctggtag agaccaccgt agttgccatc
     2101 ggggatatag gcccgcatag cgacgggatc gagcagccgg accttgtcga tgtcgaccat
     2161 cgggcgctgg gtcctgggga gatcgatgcc gggaagccgg gtccagggaa agctctccat
     2221 ccacgacccg tgggaggcga ccgggtcgat ggcctgcacc cgggcccagg tcttc
//
LOCUS       DATIFF010000551         1496 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2223733, whole genome shotgun sequence.
ACCESSION   DATIFF010000551 DATIFF010000000
VERSION     DATIFF010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1496
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2223733"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..247
                     /locus_tag="VLD58_08145"
     CDS             <1..247
                     /locus_tag="VLD58_08145"
                     /inference="COORDINATES: protein motif:HMM:NF015734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HSB54313.1"
                     /translation="AGTPIDLVISSGPAEITVPAVVGLSSTQARDQIEALGLAVGAIT
                     SRVTPDRPEGTVLDQRPGGGTRAARGSRVDLIVTRKS"
     gene            247..912
                     /gene="rpe"
                     /locus_tag="VLD58_08150"
     CDS             247..912
                     /gene="rpe"
                     /locus_tag="VLD58_08150"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: protein motif:HMM:NF004076.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HSB54314.1"
                     /translation="MSVRIAPSLLAADLGRLREQVEQALAGGAEWLHVDVMDGRFVPN
                     LTFGAPLLRALRRFTDAPLDVHLMVIEPERYLAEFADLGAKVFTFHPEATLHVQRHLA
                     AVRERGMLAGLALNPSSPLALVEEVVDDLDLLLIMSVNPGFGGQSYLSGASDKLRRAR
                     ALLDRHSSRAVLEVDGGITAETIETAWRAGADTFVAGTAIFGAPDVAEAIRQLRRRCS
                     ERV"
     gene            918..>1496
                     /locus_tag="VLD58_08155"
     CDS             918..>1496
                     /locus_tag="VLD58_08155"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HSB54315.1"
                     /translation="MSKQWAFVGAVVMGLLLGGAALVWYGPEVEQVAAGAKAPNFRVV
                     DLQTGDTVAIRDRYRGHVTLVNIWATWCVPCRVEMPSMERLYDSLGSRGFRIAAVSID
                     QEGPEVVRQFGSDLGLTFDLLQDRTMAIQQAYQTTGVPESFLLDTNGVIMKRVIGAHD
                     WSSPVNRALVRRLMGDTAGGLTLGDSAATDPVP"
BASE COUNT          227 a          490 c          544 g          235 t
ORIGIN      
        1 ggccggcacc cccatcgatc tggtaataag ctccggaccc gccgagatca cggtccccgc
       61 cgtcgtgggg ctgtcgagca cccaggcgcg ggaccagatc gaagcgctcg ggctggcggt
      121 gggggcgatc accagtcggg tcacgccgga ccggccggaa ggaactgtgc tggaccagcg
      181 tccgggcggg ggcacccgcg ccgcgcgggg ctcgcgggtc gacctcatcg tcacgcggaa
      241 gagctgatga gcgtgcgtat cgcgcccagc ctgctggcag ccgacctcgg ccggcttcgg
      301 gagcaggtgg agcaggccct ggccggcggg gcggagtggc tgcacgtgga cgtaatggac
      361 ggccggttcg ttccgaacct caccttcgga gccccgctgc tccgggcgct ccggcgattc
      421 accgacgcgc cgctcgacgt ccacctgatg gtaatcgagc cggagcgcta cctggccgag
      481 ttcgccgacc tcggggcgaa agtgttcacc ttccaccccg aggcaacgct gcatgtgcag
      541 cggcatctgg ccgccgtgcg cgagcggggg atgctggcag gcctggccct gaatccgtcg
      601 agtccgctgg ccctggtgga ggaggtagtg gacgacctcg accttctgct tatcatgagc
      661 gtgaatccgg gcttcggggg ccagtcgtat ctgtcgggag cgtcggacaa actgcgccgc
      721 gcccgcgctc tgctggaccg gcacagttcc cgcgccgtgc tcgaggtaga cggcgggatc
      781 acggcggaaa ccatcgaaac ggcatggcgg gccggcgcgg atacctttgt ggccggcacc
      841 gctatcttcg gtgccccgga cgtagccgag gcgatacgcc agctgaggcg ccgctgcagc
      901 gaaagggtct agagacgatg tcgaagcagt gggcattcgt gggtgcggtg gtcatgggtc
      961 tcctcctcgg cggcgccgcc ctggtgtggt acggcccgga agtggagcag gtggccgcgg
     1021 gggcaaaggc gccgaacttc cgggtggttg atctccagac cggggatacc gtcgccatcc
     1081 gcgaccgtta ccgcgggcac gtcacgctgg tgaacatctg ggccacctgg tgcgtcccgt
     1141 gccgggtgga gatgccgtca atggagcggc tgtacgacag cctggggtcc aggggcttcc
     1201 gcattgcggc agtgagcatc gaccaggaag gtcccgaggt ggtccggcag ttcggcagtg
     1261 acctgggcct caccttcgac ctgctgcagg accgcaccat ggcgatccag caggcctacc
     1321 agactaccgg ggtgcccgag agcttcctgc tggacaccaa cggcgtgatc atgaagcggg
     1381 tgatcggagc ccacgactgg tcctctcccg tcaaccgcgc cctggtccgt cggctcatgg
     1441 gcgatactgc cggcggcctg acgctgggcg attcggccgc aaccgacccg gtcccg
//
LOCUS       DATIFF010000552         1496 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1916955, whole genome shotgun sequence.
ACCESSION   DATIFF010000552 DATIFF010000000
VERSION     DATIFF010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1496
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1916955"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..727)
                     /locus_tag="VLD58_08160"
     CDS             complement(<1..727)
                     /locus_tag="VLD58_08160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HSB54316.1"
                     /translation="MSRWEEPVARAFAAVGLDRIRAKLLVFAVTAAILPALATGWMSY
                     GTNKSALREKIEDGLETAGSQAAREIDLWFKQQLYDLRVFGSSYEVTENLDRFQRSGT
                     RPARLDDYLASVQQRVPDYSVLQVMTLDGRVVGSSPRGSRPLALPENAAADLRQERPL
                     FGAITADDATHAAMMNIAVPVKSADGRIVGMINGRRSLASLDLTLRELLPEGLGRLYL
                     VSAEGLPIPIGKTAEGAPGLDSST"
     gene            complement(832..>1496)
                     /locus_tag="VLD58_08165"
     CDS             complement(832..>1496)
                     /locus_tag="VLD58_08165"
                     /inference="COORDINATES: protein motif:HMM:NF014879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54317.1"
                     /translation="VAIDYLLTHRPGWSATASVGKTLVSSGLIDRVVAAHGRRLLEVP
                     VGFKWFAPGLFDGSCCFGGEESAGASFLRRNGAVWTTDKDGILLGLLAAEIVAVTGRG
                     PGRLYEALTARLGAPVYTRIDTPCTAAEKAGFKRLTPDAVKTGTLAGEAITARLTRAP
                     GNGAEIGGLKVVTANGWFAARPSGTENVYKLYAESFVDASHLERIVEEARAIIATALG
                     GN"
BASE COUNT          219 a          551 c          493 g          233 t
ORIGIN      
        1 cggtcgacga gtcgagtccc ggcgctcctt ccgcggtctt cccgatgggg atgggcaggc
       61 cctccgcgga tacgaggtac agccggccga ggccctcggg gagaagctcc cgcagcgtca
      121 ggtcgaggct ggccagactc cgccggccgt tgatcatgcc gacgatccgg ccatcggccg
      181 acttgacagg cacggcgatg ttcatcatcg ccgcatgggt ggcgtcgtcc gcggtgatgg
      241 cgccgaacag cggacgttcc tgtcggagat ccgcagcggc gttctccggc aaggccagcg
      301 gccgcgagcc gcgggggctg ctgccgacga cccggccgtc gagggtcatg acctgcagga
      361 cggagtagtc gggtacccgc tgctgcaccg acgcgagata gtcgtccagc cgcgcgggcc
      421 gagtgcccga gcgctggaac cggtccaggt tctcggtgac ctcgtacgat gagccgaaca
      481 cccgcaggtc gtacaactgc tgcttgaacc agagatcgat ctcccgcgcg gcctgggagc
      541 cggcggtttc cagcccgtcc tcgatcttct cgcgcagggc gctcttgttg gtgccgtagg
      601 acatccagcc ggtggccagc gcgggcagga tggcggccgt caccgcgaac accagcagct
      661 tggcccgtat ccggtccagc ccaacggctg caaaggcccg cgctaccggc tcttcccatc
      721 ggctcacgtc tgactctccc tggaagccgg ccggcaacgt acccggcggg cctcaccgtg
      781 aaaagccggc cagggtccgt tccctgccgg ctggtgcgcg agcgagccgg gtcagttgcc
      841 gcccagcgcc gtcgcgatga tcgctcgcgc ctcctccaca atccgctcca ggtgcgaggc
      901 gtccacgaag ctctcggcat agagcttgta gacgttctcc gttccggaag gccgcgcggc
      961 gaaccagccg ttggccgtga ccaccttgag ccccccgatc tccgctccgt tgcccggggc
     1021 ccgtgtcagc ctggcggtga tggcctcccc ggccagggtc ccggtcttca ccgcatcggg
     1081 ggtgagccgc ttgaaccccg ctttttccgc cgcagtgcac ggcgtatcga tccgggtgta
     1141 gaccggagcg cccaggcgcg cggtcagtgc ctcgtacaac cggcctggcc cccgcccggt
     1201 caccgccacg atctctgccg ccagcagtcc cagcaggatc ccgtccttgt ccgtggtcca
     1261 gaccgcaccg ttccgccgga ggaagctcgc accggcgctt tcctctcccc cgaagcagca
     1321 gctgccgtca aagagcccgg gcgcgaacca cttgaagccg accggtacct ccagaagccg
     1381 ccgtccgtgc gccgccacga cccggtcgat cagcccgctc gacaccaggg tcttgcccac
     1441 gctcgccgtg gcggaccatc cggggcggtg ggtaagcagg tagtcgatgg ccaccg
//
LOCUS       DATIFF010000553         4355 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1455794, whole genome shotgun sequence.
ACCESSION   DATIFF010000553 DATIFF010000000
VERSION     DATIFF010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4355
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1455794"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..558)
                     /locus_tag="VLD58_08170"
     CDS             complement(<1..558)
                     /locus_tag="VLD58_08170"
                     /inference="COORDINATES: protein motif:HMM:NF015319.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HSB54318.1"
                     /translation="MTTYCDIAPGHEWHGPYHDREYGFPLKGDAELFERLVLEINQAG
                     LSWLTILKKRAAFHQAYDGFDPEIVARYKARDVKRLLADAGIIRNRLKVEAAIANAKT
                     LLQIRESHGGFHGWLAAHHPLPKPEWVKLFKQTFRFTGGEIVGEFLLSTGWIPGAHQE
                     SCPVYAKVLKKRPMWARVVGHGSRSD"
     gene            714..3404
                     /locus_tag="VLD58_08175"
     CDS             714..3404
                     /locus_tag="VLD58_08175"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB54319.1"
                     /translation="MDIVPTGRAQRFYRRCIALYPDSFRREAEGELCHSFDAAWRDAG
                     DRRDRARVTLNVALDLLRTIPAEWLATLSTPRPRGDATPMETLLQDLKYALRSLRGTP
                     LVMLVAACTIAIGVGATTTMFSVANAMLLRTPAGVTDPDRLITVHSMDQRGTSFHSFS
                     YPDFQDLASGGAKAAELSAYTMLPASVRTSGEPRLEAGLLVSANYFPVLGVRMALGRG
                     FTADEDRVGGPPVVIISHGLWQRQFGSDPAILGRTITVNGHALTVVGVTEAGFHGHIA
                     ALDFTLWAPVTLMPILSDRGADPLSRRSSSLEIVGRLAPGVARAQAYEVLDAVSIQAG
                     REAGRDWDQTVDVRRYLPLPAEVALPAGGFLGLLILLGGLVLLIASANVANMLLARAT
                     ARGREMGVRLALGASRGRLIRQLITESLVLFLVGGALGTALASLAVSAIARFQPPLPI
                     PLLLDFHLDMRVLMVSLGITLMAGLLFGLTPALQATRHDLTAVLRDALASARVGRWRL
                     RGFMVSGQVAGTAFLLVVAGLFVRALGRAGNVDVGFNPTDVQVLGMEMRVSNYQGERL
                     TAFDQAVEQRIAQLPGVVSVAGTDFLPLNMGTQQTMVNLEGKPPQQGVGIFETDFASV
                     TPGYFATLQLPLKSGREFTAADRPGAPDVAVINEKLASQLWPGEDPIGKRLRFGSPTE
                     GSTTEIVGVIPNVNVRAIGEAPVPVIYVPLAQSNGRNLALLVRTRPGSAPSAGELRAA
                     LHEIDPNLPLSQEGKYSDIIALALLPNRIAAFLATMFGITGVTLAAVGLYGLLAFRVQ
                     SRRKEIGIRMALGAGAGEVRRLVMREALLVTLTGLAFGLLIAGGATQLLRSLLFGLSP
                     MDPVTYVAIGGFLLLVCWGAAAGPVRRALRTEPLEVLRHE"
     gene            3397..3717
                     /locus_tag="VLD58_08180"
     CDS             3397..3717
                     /locus_tag="VLD58_08180"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HSB54320.1"
                     /translation="MSEPLRPRVFAILLALAEGPRHGYGLMQSLQADPTEQWLLGPAT
                     LYRTLKEMQTEGLITSTEGPDQESGGPPRRYYRLTATGHRAGAAEAARMATLARRWES
                     VETA"
     gene            3742..>4355
                     /locus_tag="VLD58_08185"
     CDS             3742..>4355
                     /locus_tag="VLD58_08185"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSB54321.1"
                     /translation="MSTMRAVVHAGAGGTEVLQLRDVEAPVPGPEQIRVRVRAAGLNR
                     ADVLQRKGRYPAPPGWPADIPGLEYAGEVDQLGSGARRWRLRDRVMGLVGGGAHAEYV
                     VVHQDEAIAVPSGLSFAQAAAIPEAFLTAWDALVTRGRLQAGERVLIHAVGSGVGTAA
                     LQLARRLGATTVGTSRSQAKLEQARALGLDEAINTGAVGFARSLS"
BASE COUNT          625 a         1474 c         1514 g          742 t
ORIGIN      
        1 atcagacctt gacccgtgac ccacgacccg ggcccacatc ggcctcttct tgagcacctt
       61 cgcatacacc gggcagctct cctggtgggc tccgggaatc cagccggtgc tgagcaggaa
      121 ctcacccacg atctcaccac cggtgaagcg gaacgtctgc ttgaagagct tgacccactc
      181 gggcttggga agcggatgat gggctgcgag ccagccgtgg aagccgccat gactctcacg
      241 gatctggagc agcgtcttcg cattggcgat cgccgcctcg accttgagcc ggttgcggat
      301 gatgccggca tcggcgagga gccgcttcac atccctggcc ttgtagcgcg ccacgatttc
      361 cggatcgaag ccgtcgtagg cctgatggaa tgccgcgcgc ttcttgagga tcgtgagcca
      421 ggagagcccc gcctggttga tctccagcac cagccgctcg aacagctcgg cgtcgccctt
      481 gagcgggaag ccatactccc ggtcgtgata ggggccgtgc cattcgtgtc cgggggcgat
      541 atcgcagtag gtggtcatgg gctggattcg gtgtatgttc gggtaaggta attggtcgag
      601 agtcgagggt cgagggttga gggtcgagga tttggggtcg gggtcagggg tcggagcaaa
      661 tggctggttg gtgctctgtg aaacatcggc caggctccgg cgtatatcca tccgtggata
      721 tagtccccac cggccgcgct cagcgcttct atcgccgctg tattgccctc tatccggact
      781 ccttccggcg agaggcggag ggcgagttgt gccactcgtt cgatgccgcg tggcgcgacg
      841 ccggggatcg ccgggaccgc gcgcgtgtca ccctcaatgt cgcgctcgat ctcctccgca
      901 ccatcccggc tgaatggctc gccactcttt cgaccccccg cccccgcgga gacgcgacgc
      961 ccatggaaac cctgctgcag gatctcaagt acgcgctccg ctcgctcagg ggcactccgc
     1021 tcgtgatgct ggtggccgcc tgcaccatcg ccatcggcgt cggcgccacc accacgatgt
     1081 tcagcgtggc caatgcgatg ctgctccgca ccccggccgg cgttaccgat cccgaccggc
     1141 tcatcaccgt gcactcgatg gatcagcgcg gcaccagctt ccattccttc tcctatcccg
     1201 atttccagga ccttgccagc ggtggcgcca aggccgccga gctcagcgcc tacaccatgc
     1261 tgccggcgag cgtgcggacc agcggtgagc cgcgactcga ggccgggctc ctggtatccg
     1321 ctaactactt cccggtgctg ggtgtgcgca tggcgctcgg gcgaggcttc accgccgacg
     1381 aagaccgggt cggcgggccg cccgtcgtca tcatcagtca cggactctgg cagcggcagt
     1441 tcggcagcga tcccgcgatt ctcggccgga ccatcacggt gaacgggcac gcgctcaccg
     1501 tggtcggtgt gaccgaggcc gggttccacg ggcacatagc ggcgctggac ttcacgctct
     1561 gggcgccggt caccctgatg ccgattctca gcgaccgcgg ggccgacccg ctgagccgga
     1621 gaagctccag cctcgagatc gtgggacggc tggcaccggg tgtcgcccgg gctcaggcct
     1681 acgaggtgct tgacgcagtt tcgatccagg cgggccggga agcagggcgg gattgggatc
     1741 agaccgtcga tgtgcgccgc tatctcccgc tccccgccga ggttgcactg ccggccggcg
     1801 gattcctcgg tctcctgatc ctgctgggcg gactggtgct gctgatcgcg agcgccaacg
     1861 tggccaacat gctgctcgcc cgcgccaccg cacggggacg cgaaatgggt gtgcggctcg
     1921 ctctgggcgc cagccggggc cgtctcatcc gccagctcat caccgagagc ctggttctct
     1981 tcctggtcgg tggcgcgctg ggcaccgccc tggcctccct ggccgtcagc gcgatcgcgc
     2041 ggttccagcc gccgctcccg atcccgctgc tgctggactt ccacctcgat atgcgggtcc
     2101 tgatggtctc gctcggcatc acgctgatgg ccggactgct gttcggactc acccctgcac
     2161 tccaggcgac caggcacgat ctcaccgcgg tgcttcgcga tgcccttgcc agcgcgcgag
     2221 tgggccgctg gcgcctgcgc ggattcatgg tctcgggaca ggttgccggg accgcgttcc
     2281 tgctggtcgt cgccgggctc ttcgtccggg cgctgggccg ggcgggcaat gtcgatgtcg
     2341 gcttcaaccc gaccgacgtg caggtgctcg gcatggagat gcgggtcagc aactatcagg
     2401 gcgagcggct caccgccttc gaccaggcgg tggaacagcg catcgcgcag ctgcccggcg
     2461 tggtctcggt ggccggcacc gattttctcc cgctcaacat gggcacccag cagacgatgg
     2521 tgaacctgga ggggaaaccg ccccagcagg gcgtcgggat cttcgagacc gatttcgcga
     2581 gcgtgacgcc gggctatttc gcgacgctgc aactgccgct caagagtggc cgcgagttca
     2641 cagcggcgga tcgcccgggg gcaccggacg tcgccgtgat caacgagaag ctggcgagcc
     2701 agctctggcc cggagaggat ccgatcggca agcggctccg cttcgggagc cccaccgagg
     2761 gcagtacgac cgagatcgtc ggggtcatcc ccaacgtcaa cgttcgtgcg attggcgagg
     2821 cgccggtgcc ggtgatctac gtgccgctgg cgcagtcgaa cgggcggaac ctcgcgctgc
     2881 tggtccgcac ccggccaggc agcgcgccgt cagcgggtga gctgcgggcg gcacttcacg
     2941 agatcgatcc caacctgccg ctctcgcagg aggggaagta cagcgacatc atcgcgctgg
     3001 cgctcctccc caaccggatt gcggccttcc tcgccacgat gttcggcatc accggcgtca
     3061 cgctggcggc ggtgggcctc tacgggctgc tcgcgttccg ggtgcagagc cggcgcaagg
     3121 agatcgggat ccgcatggcg ctgggcgccg gcgcgggcga ggtccggcgc ctcgtcatgc
     3181 gggaagcgct gctggtgacg ctcaccggcc ttgccttcgg tctcctgatc gcgggcggag
     3241 cgactcaact gctgcgaagc ctcctcttcg gcctgagtcc gatggatccc gtcacctacg
     3301 tcgccatcgg gggattcctg ctgctggttt gctggggcgc ggccgcgggt ccagtccggc
     3361 gcgcgctccg caccgagccg ctcgaggtgc tgcgtcatga gtgagccgct caggccgcgg
     3421 gtgttcgcga tcctgctcgc cctcgcggaa ggtccgcgtc acggatacgg gctgatgcaa
     3481 tcgctccagg ccgaccccac cgagcagtgg ctcctcggcc cggccacgct ctaccgcact
     3541 cttaaggaga tgcagacgga ggggctgatt acgtcgaccg aaggaccgga ccaggagtcg
     3601 ggcggtccgc cgcggcggta ctaccgcctt accgctaccg gccatcgagc cggcgctgcc
     3661 gaggccgcgc gcatggctac actggcgcgc cggtgggagt cggtagaaac ggcgtagccc
     3721 tttcccggct actttccccg catgtcgacg atgcgtgcgg tggtgcatgc cggtgccggc
     3781 ggcaccgagg tgctgcaact cagggatgtc gaggcgccgg tgcccgggcc ggaacagatc
     3841 cgggtgcggg tacgtgcggc cggtctcaat cgcgccgacg tgcttcagcg aaaaggccgc
     3901 tatcccgcgc cgcccgggtg gccggccgat atccccggtc tcgagtacgc cggcgaggtc
     3961 gatcagctcg gcagcggcgc gcgtcgctgg cgcctgcgcg accgggtgat gggcctcgtc
     4021 ggcggcgggg cccacgccga gtacgtggtg gtgcaccagg atgaggcgat cgcggttccg
     4081 tcgggattgt cgttcgcgca ggcggccgcg attcccgagg cattcctgac cgcatgggat
     4141 gcgctggtga cccgcggacg gctgcaggcg ggggagcggg tgctgattca cgcggtggga
     4201 agcggcgtgg ggacggcggc gctgcagctg gcgcggcggc tcggggccac gacggtggga
     4261 acttcgcgca gccaggccaa gctcgaacag gcccgcgccc tgggactcga cgaggcgatc
     4321 aacaccggcg ccgtcggttt cgcccgcagt ctctc
//
LOCUS       DATIFF010000554         1018 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_686429, whole genome shotgun sequence.
ACCESSION   DATIFF010000554 DATIFF010000000
VERSION     DATIFF010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_686429"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..287)
                     /locus_tag="VLD58_08190"
     CDS             complement(<1..287)
                     /locus_tag="VLD58_08190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54322.1"
                     /translation="MRGRVWASVAAGLLWGAATGAEPAAQPVTAIRAGVLIDGASGSP
                     RTNQLIVIRGNRIESVGAGTAPAGARVIDLSSATVLPGMIDAHTHVFLQGE"
     gene            406..>1018
                     /locus_tag="VLD58_08195"
     CDS             406..>1018
                     /locus_tag="VLD58_08195"
                     /inference="COORDINATES: protein motif:HMM:NF014027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008612 - peptidyl-lysine modification to
                     peptidyl-hypusine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase family protein"
                     /protein_id="HSB54323.1"
                     /translation="MPKPSKSRGLRAAYARSRSVDPRPITGREKPADLLAHAFGAYVG
                     RQERTAFELMQRSVAEDCSIFLTLSGAMTPAGLHQSCLIPLIERGIVSALTTTGANLY
                     HDAHRIIGHAIREVNPNAGDLQMRLARIIRIYDLGFWEEALLDTDRLFSAIIRRPEFQ
                     RRMTTPEFHYLLGRAVHGIERSLGVKKPSLLSTAYKHAVPIWVG"
BASE COUNT          159 a          399 c          314 g          146 t
ORIGIN      
        1 tcctcgccct ggaggaaaac gtgagtgtgc gcgtcgatca tccccggcag caccgtcgcg
       61 ctggacaggt cgatgacccg cgcgccggcc ggggcggtac cagcgccgac gctctcgatc
      121 cggttgcccc ggatgacgat cagctggttc gttctcggtg agccggaggc gccgtcgatc
      181 agcacccccg cccggatggc cgtcaccggc tgcgctgccg gctccgcgcc cgtcgccgcc
      241 ccccagagca atcctgcggc cacgctcgcc cagactcgtc ctcgcatccg tctcctcccg
      301 gcaccccagg cctcccggcc atgcgatacc cgccatccga agggcgaccg atgcttccgc
      361 atccggcgac ccgcggcaaa ggcattcgtg atagtcggcc ccgccatgcc caagccctcg
      421 aagagccgcg gcctgcgtgc cgcctacgcc cgatcgcgaa gcgtcgaccc acggcccatc
      481 accgggcgcg agaagccggc ggacctcctg gctcacgcct tcggcgccta cgtgggccgc
      541 caggagcgga cggccttcga gctcatgcag cgaagcgtgg cggaggactg cagcatcttc
      601 ctgaccctct cgggggcgat gaccccggcc gggctgcacc agagttgcct catcccgctc
      661 atcgagcgcg gcatcgtgag cgcgctcacc accaccggcg ccaacctgta ccacgacgcc
      721 caccgcatca tcgggcacgc catccgcgag gtgaacccca acgccggtga cctccagatg
      781 cgtctggccc gcatcatccg catctacgac ctgggcttct gggaggaggc gctactggac
      841 accgaccgcc tcttcagcgc gatcatccgc cgccccgagt tccagcggag gatgaccacc
      901 ccggaattcc actatctgct cgggcgggcg gtgcacggga tcgagcggtc gctgggggtg
      961 aagaagccat cgctgctctc caccgcctac aagcacgcgg tacccatctg ggtcggag
//
LOCUS       DATIFF010000555         2942 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_226016, whole genome shotgun sequence.
ACCESSION   DATIFF010000555 DATIFF010000000
VERSION     DATIFF010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2942)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2942)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2942
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_226016"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            65..829
                     /gene="bioD"
                     /locus_tag="VLD58_08200"
     CDS             65..829
                     /gene="bioD"
                     /locus_tag="VLD58_08200"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004141 - dethiobiotin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HSB54324.1"
                     /translation="MTSPPPKKRKSPARASRPAAAPRDEAPPAVISLPITLVVGTDTG
                     VGKTWISASLARALKLAGQQVIAVKPIETGITEPSSFAEDGALLAEATGQAGPRRALV
                     RLPGHMGPAIAADQAGVEVDYEDLVARLRSLATPETMLVVEGTGGLLSPLTWQDNHLD
                     LAHSLDARVLLVAADRFGTISHTLMALRVLRAEKIPVLGIVLNQVEETLDESSRTNAM
                     AIQRLAEGTPVVVVPRLDDPVQAAEALKEVAGWILP"
     gene            complement(830..>2942)
                     /locus_tag="VLD58_08205"
     CDS             complement(830..>2942)
                     /locus_tag="VLD58_08205"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HSB54325.1"
                     /translation="LRRPVRFGDTVQFVIDYDGTVHNGKGLTFIEGDSLPPRRPRQIW
                     SQGEDHDNHYWFPTYDFPNDKATWELVATVPKGFTAVSNGRLLSDRTSAAGLRTMDWL
                     QDQPSATYLASLIVAPLVKIADKWRTTPVDYYVYPGDSVAGRRLFAETPDMIEVYSRL
                     TGVNYPWRKYAQTTVADFFGGMENVSATTLVDWLPDSRAYADRPWYHHILIPHELAHQ
                     WFGDYATLGNWANMWLNEGFAEFMPGQYWDQKLGRHAEDDYYLDEYNQFLGIDQNRRM
                     PLAAMGSNNVYPKGALVLRMLKKYLGEERFWAGVRRYLKDHAFDNAVTDDLRQAFLAA
                     TGENLDWFWDQWIYQAGYPEFAVDAAWDSASATVRLAVKQVQQDTAKADSSGLRYVTP
                     AVFRMPVTVRVGTPVGDVRSKAWLTEREQMITIAGVTAAPTMIVFDEGNTILKRLTFA
                     QPTAWLATQLEQDADLWNRAWVIDQLRGRKEDAAAAQALARAVTRSDYFLTRVQAAEA
                     LAGMVGPETRTALLAGTRDTSAQVRAAAITALGAGGSEEATARARELWGRDTSYAVRA
                     AALGALARLDRENAASLLRTGLTTPSYQDAIADAALGAIVQTNDTSLVAEVDGAVERT
                     GNAAFVLGILGARGNARALDLLAARVASPRATVRKRVLQAFQFVVPPAISRDRLAALA
                     GAAGSPRLREEIEATIERLDR"
BASE COUNT          455 a         1002 c         1006 g          479 t
ORIGIN      
        1 aagggtggcc gcgcttcgta tattgccttg ttgcaccgct cgagcctccc acggagaaac
       61 ccggatgacc tcgcccccgc ccaagaagcg aaagtctccc gcgcgcgcct cccggccggc
      121 ggccgcgcct cgcgatgagg cgccgcctgc ggtcatttcg ctgccgatca ccctggtcgt
      181 gggcaccgat accggcgtgg gcaagacctg gatcagcgcc tcattggccc gggcgctcaa
      241 gctggcgggt cagcaggtca ttgccgtcaa gccgatcgag accggcatca ccgaaccctc
      301 ctccttcgcc gaagatggcg cgctgctggc cgaggccacc ggccaggccg gcccgagacg
      361 ggccctcgtg cggcttccgg ggcacatggg tccggcgatc gcggcggacc aggcgggggt
      421 cgaggtcgac tacgaagacc tggtcgcgcg tctccggagt ctcgccacgc ccgaaaccat
      481 gctggtcgtg gagggcaccg gcgggctgct ttccccactc acctggcagg acaaccacct
      541 ggatctggcc cacagcctgg atgcgcgtgt gctgctggtg gcagccgatc gcttcggcac
      601 catcagccac acgctcatgg cactgcgggt actccgggcc gagaagattc ccgtgctggg
      661 gatcgtactg aaccaggtgg aggaaacgct ggacgaaagc agccgcacca acgcgatggc
      721 gatccagcgg ctggcggagg gaaccccggt ggtggtggtg ccgcgcctcg acgacccggt
      781 gcaggccgcc gaggcgctca aggaagtggc cggctggatc ctcccctgat cagcggtcga
      841 ggcgctctat cgtcgcctcg atttcttccc tgagccgcgg cgagccagcc gctccggcga
      901 gcgcggcgag tcggtcgcgg gaaatagctg ggggcacgac gaactgaaac gcctgcagca
      961 cccgcttccg caccgtagcc cggggcgacg ccacacgggc agccagcagg tccagcgccc
     1021 gggcatttcc acgggcgccc aggatcccca gcacgaaggc tgcgttcccc gtccgctcca
     1081 cggcaccatc cacttcggcc accagtgacg tgtcgttggt ctgtacaatg gcgccgagcg
     1141 cggcgtcagc gatcgcgtcc tggtaggacg gcgtggtaag accggtgcgg agcaatgacg
     1201 ctgcgttctc ccggtcgagc cgcgcgaggg cgccgagcgc agcggcgcgg accgcgtagc
     1261 tggtgtcgcg gccccagagc tcgcgggccc gcgcagttgc ctcctccgat cccccggcac
     1321 ccagcgccgt gatcgccgca gcgcggacct gcgccgaagt gtcgcgggtc ccggccagca
     1381 acgccgtcct cgtctccggt cctaccatcc ccgcgagcgc ctcggccgcc tgtacccggg
     1441 tgaggaagta gtcactgcgc gtcacggccc gggcgagcgc ctgggctgcc gcggcgtcct
     1501 ccttgcggcc acgcagctgg tcgatgaccc aggcacgatt ccagagatcc gcatcctgtt
     1561 cgagctgagt cgccagccac gcggtaggct gggcgaaggt gagccgcttg aggatggtgt
     1621 tgccctcgtc gaacacgatc atcgtcggcg cggccgtcac cccggcaatc gtgatcatct
     1681 gctcccgctc ggtgagccac gccttgctcc gcacgtcacc caccggggtg cctaccctaa
     1741 ccgtgacggg catgcggaat accgccggtg tgacgtagcg gagcccgctg ctgtcggcct
     1801 tggcggtgtc ctgctgcacc tgcttcaccg cgaggcgcac ggtcgcggag gccgagtccc
     1861 acgcggcgtc gacggcgaac tcggggtacc cggcctggta gatccactgg tcccagaacc
     1921 agtccaggtt ctcgccggtg gccgcgagga aggcctgcct gagatcgtcg gtgaccgcgt
     1981 tgtcgaaggc gtggtccttg aggtagcgcc ggacgccggc ccagaagcgc tcctccccca
     2041 ggtacttctt gagcatccgc aggaccagcg cgcccttggg atacacattg ttggatccca
     2101 tagcggcgag cggcatccgg cgattctggt cgatgccgag gaactggttg tactcgtcga
     2161 ggtagtagtc atcctccgcg tggcggccca gcttctggtc ccagtactgt cccggcatga
     2221 actcggcgaa gccctcgttg agccacatgt tggcccagtt gccgagggtg gcatagtcac
     2281 cgaaccactg gtgggcaagc tcgtggggaa tgaggatgtg gtgataccag gggcggtcgg
     2341 cgtaggcgcg gctgtcgggg agccagtcca ccagcgtggt ggcgctcacg ttctccatcc
     2401 cgccgaagaa atcggcgacg gtggtctggg catacttccg ccacgggtag ttcaccccgg
     2461 tgaggcgcga gtacacctcg atcatgtcag gcgtctccgc gaagagccgc cgccctgcga
     2521 cgctgtcccc cgggtagacg tagtagtcga ccggggtggt tcgccacttg tccgcgatct
     2581 tcaccagcgg cgccacgatc agcgaggcga ggtacgtcgc cgatggctga tcctggagcc
     2641 agtccatggt acgaaggccc gcggcactgg tccgatccga tagcagccgg ccgttgctca
     2701 ccgcggtaaa gcccttcggc accgtcgcga ccagctccca ggtcgccttg tcgttgggga
     2761 agtcgtaggt cgggaaccag tagtgattat cgtggtcctc gccctggctc cagatctggc
     2821 gggggcggcg gggcggaagg gagtcgcctt cgatgaaggt gaggcccttg ccgttgtgga
     2881 ctgtgccatc gtagtcgatg acgaactgca ccgtatcgcc gaatcgcacc gggcggcgga
     2941 gg
//
LOCUS       DATIFF010000556         3823 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2071873, whole genome shotgun sequence.
ACCESSION   DATIFF010000556 DATIFF010000000
VERSION     DATIFF010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3823
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2071873"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..3342
                     /locus_tag="VLD58_08210"
     CDS             <1..3342
                     /locus_tag="VLD58_08210"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB54326.1"
                     /translation="ARFASSAGVELRVFAPQSVPRSPDIFDYVVPGPRGDRLLFSIQP
                     LPPEQEVAERAVARDVEVWVGLALLALITVVLLSSTSPAQRWLVMVGLLWAATRAPLG
                     PAVGLEDLFSPANFRRGILGRLSSSPGHLLLTSALVLVFSAWLRGRALGRRRLRIVVG
                     SVLLLGAPYLVSELGRGIIPPLNGVPPNLWITWQVTLAIATSALIVLAAALFRGDDEP
                     TDGLSWVVLGSAIALAAAIVGLEVWVPRTGWPEWYTFLWTPALFLVARPAPKWALVAG
                     TAIVAGSAAALVTWGAELNGRISVAQSDLARLGDVEDPLAEPYLERFADQIAAGPEPT
                     TPAGMFVAWRSSYLAGQEFPVRLALWERTGLRRADLALDSLDLPAPLLSALVRSFDSS
                     SSRSVVRLFRVPGRYHVLLQHLPSGRILTAAVGPRSRAMAPARIARLLRPPAEGAPLY
                     EMNLSPPFTRGLVEEPEPRWVREEGQARSERLIDFPDGTRHVHATVTIRPVPLLLVRG
                     ALLVALDALILGLLWGLATLRIGGVRGVRVNRLMRSFRVRLALTLALFFVLPAVGFTT
                     WGLGRLGDEADRTRDLLITSVLRDAVLTAGGLLQEPGDVLTEGVSDLSNRLDADLVLY
                     SGGRLVAASAPILEDLSLVEPLIDARVFQRLTTGDELELTRQATTYVAPVRVGYRVAQ
                     AGPPGGIGILATPQLASDWRRTQDQRDLAFGLLLATLGGLGGALLAAQLVARALSRPV
                     TDLQRLAGAVGRGAPLPAVGPPATEFERVFRAFEHMATDIRASQTALEEARRRTAAVL
                     ANVATGVVALDRDGLVVLANSRARQLLGAALEGGLSLETALSSGWGPLVAEVKSFLPS
                     GAADRATEVEVEARLYRLQLARLGESGGAVLAVDDLTDVSQAARVLAWGEMARQVAHE
                     IKNPLTPIRLGMQHLRRVRRDRPEQFDQILEETSARILSEIDRLDTIARAFSRFGLPG
                     NQQAPLESVDLAAVAREVAGLYRLTADGVALSVEGQESVHLPARKDEVKEVLGNLLEN
                     ARNAGARTIVLRVETQSFELTDDGHGIPAELVPRIFEPRFSTTTSGSGLGLPIVRRLV
                     ESWGARVEVKSEPGRGTTVVVVWPA"
     gene            3516..>3823
                     /locus_tag="VLD58_08215"
     CDS             3516..>3823
                     /locus_tag="VLD58_08215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54327.1"
                     /translation="MNPEPIPQDLIAVHDLLRETLAVARDNGGPFQYGVAIFPRTGRF
                     GAPVFGIATSGGESTVLTYRMLQSLVELPVYLSGRVPATIREGLSYGPPRVIPVALLD
                     "
BASE COUNT          496 a         1270 c         1372 g          685 t
ORIGIN      
        1 gcccggttcg cctccagcgc cggagtcgag ctccgggtct ttgcacccca gagtgtcccg
       61 cgttcacccg acattttcga ctatgtcgtt cccggacccc ggggcgaccg cctcctgttc
      121 agcatccagc cgttgccgcc ggagcaggag gtggccgagc gggcggttgc gcgcgacgtc
      181 gaggtgtggg tgggcctcgc gctgctggcc ctgatcacgg ttgtcctgct cagctcaact
      241 tcgccggcgc agcgatggct ggtgatggtc ggcctgctgt gggctgcgac ccgggctccg
      301 ctgggcccgg cggtgggcct cgaggatctg ttttcgcccg ccaatttccg acgaggaatc
      361 ctgggccgtc tgtcgtcgtc gccggggcac ctgctgctca ccagcgcgct ggtactggtc
      421 ttctccgcct ggctgcgagg ccgggctctg gggcgtcgcc ggctccgcat cgtggtcggc
      481 tcggtgctcc tgcttggcgc tccatatctc gtcagcgagc tcgggcgcgg catcatccct
      541 cccctcaacg gcgtcccgcc gaatctctgg attacctggc aggtcacgct ggcgatcgcc
      601 accagcgcgc tgatcgtgct cgcggccgcg ctcttccgcg gcgacgacga acccaccgat
      661 gggctgtcgt gggtggtgct cggatccgcg atcgctctgg cggcggccat cgtggggctc
      721 gaggtctggg tgccccgaac cggatggcct gagtggtaca ccttcctgtg gaccccggcg
      781 ctgttccttg tggcccggcc ggcaccgaag tgggcgctgg tggcggggac ggcgattgtg
      841 gcggggagcg cggcggcgct ggtgacctgg ggcgcggagc tcaacggccg gatcagcgtg
      901 gcccagtcag acctggcccg gctgggcgat gtcgaggatc cgctggccga gccttacctc
      961 gagcgctttg ccgatcagat cgcggcgggt ccggagccca ccacgccagc cgggatgttc
     1021 gtcgcgtggc ggagctccta tttggcgggc caggagtttc cggtacggct tgccttgtgg
     1081 gagcgcaccg gccttcggcg ggccgatctc gccctggatt cactcgacct ccctgcgcca
     1141 ctcctctcgg cgctggttcg ctctttcgac agcagcagct cacgctcggt ggtgcggctc
     1201 ttccgggtgc ccggtcgcta tcatgttctg ctccagcacc ttccgagtgg ccggattctc
     1261 acggcagcgg ttggtccccg aagccgggcg atggccccgg cccggatcgc acggctgctg
     1321 cgtccaccgg cagaaggggc cccgctctac gagatgaact tgtcgccacc gtttacccgc
     1381 ggcctggtcg aggaacccga gccacgctgg gtccgggagg aagggcaggc gcgctcggag
     1441 cggctgatcg acttccccga cggcaccagg catgtgcacg cgacggtcac aatccgccct
     1501 gtgccgctgc tgctggtgcg gggagcattg ctggtcgcgc tcgacgcact gatcctggga
     1561 ctcctctggg ggctggcgac cctcaggatt ggcggggtgc gaggggtcag ggtcaaccgg
     1621 ctgatgcgct ccttccgggt gcggttggcg ctcaccctgg cgttgttctt cgtgctcccg
     1681 gcggtgggct tcacgacgtg gggactgggc cggctgggcg acgaggcgga ccgcacgcgc
     1741 gacctgctca tcacttcggt actccgcgac gcggtgctca cggcgggcgg gctgctgcag
     1801 gagccgggcg atgtgctcac cgaaggggtc agcgatctct ccaaccggct cgatgcggac
     1861 ctggtgctct acagcggagg ccggctggtc gccgcaagcg ccccgattct ggaggatctg
     1921 tcgctggtcg agccgctcat cgacgcgcgg gtcttccagc gcctcaccac cggtgatgag
     1981 ctggagctca cccgtcaggc cacgacctat gtcgctccgg tgagggtggg ttatcgggtg
     2041 gcgcaggccg gaccgccggg tgggatcggc attctggcga cgccgcagct cgccagcgac
     2101 tggcggcgca cccaggacca gcgcgacctc gccttcgggc tcctgctggc gacgctcggc
     2161 gggctgggcg gcgcgctact ggcggcccaa ctggtggctc gcgcgctctc ccggccggtc
     2221 accgacctgc agcggctggc gggcgccgtg gggcggggtg cacccctccc ggcggtgggt
     2281 ccgccggcca ccgagttcga acgggtgttc cgcgccttcg aacacatggc caccgacatt
     2341 cgcgcgagcc agactgcgct ggaggaggcg cgccggcgga ccgccgcggt gctcgcgaat
     2401 gtcgctaccg gtgtggtggc gctcgatcgc gatgggctcg ttgttctcgc gaactcccgc
     2461 gcgcggcagt tgctgggcgc cgcgctcgag ggaggattga gcctcgagac ggcgctttcg
     2521 tccggatggg gcccactggt cgcggaggtg aagagcttcc tgccgagcgg cgcggcggat
     2581 cgcgcgaccg aagtcgaggt ggaagcgcgg ctctatcgcc tgcagctggc gcgcctcggc
     2641 gagtcggggg gagcggtgct cgcggtcgat gatctcaccg atgtgagcca ggcggcgcgg
     2701 gtcctcgcgt ggggcgagat ggcccggcag gtggcgcacg agatcaagaa tccgctgact
     2761 ccgatccggc tcgggatgca gcatctgcgg cgggtgcggc gcgaccggcc ggagcagttc
     2821 gatcagatcc tggaagagac ctcggcccgc atcctgtcgg aaatcgatcg cctcgacacc
     2881 atcgcccggg cattcagccg gttcggcttg ccgggcaacc agcaggcgcc gctcgagtcg
     2941 gtcgacctgg ccgcggtcgc ccgcgaggtg gccgggctgt atcgcctcac tgccgatggc
     3001 gtcgccctgt cggtggaggg gcaggagtcg gtgcacctgc cggcccgcaa ggatgaggtg
     3061 aaagaggtgc tgggaaacct gctcgagaac gcccggaatg ccggcgcccg caccatcgtg
     3121 ctccgggtcg agacccagag cttcgagctg accgacgatg gccacggtat tccggcggag
     3181 ctggtgccac gcattttcga gccgcgcttc tccaccacta ccagcggctc agggctcggt
     3241 cttcctatag tccggagact ggtggaaagt tggggcgcgc gggtcgaggt gaagagtgaa
     3301 ccgggtcgcg ggaccacggt tgtagtggtc tggccggcct agtggttgca ttgtcgggta
     3361 ttctggtaca tcgtatccga gccagtggga accgaactcc gcaggaacgc atttccagca
     3421 agtccatgga tggcagctgg catcaggccc gagacctgca ttgtccctgg tcactgcggc
     3481 caacgctcgg tcgagctgtc tcaaggactt ctcccatgaa tccagagccc atcccccagg
     3541 acctgatcgc cgttcacgac ctcctccgcg aaacccttgc cgttgctagg gataacggtg
     3601 gtccgttcca atacggggtg gcgattttcc cgcgcaccgg ccggtttggc gcgccggttt
     3661 tcgggatagc taccagtggc ggcgagtcaa cagtcctgac ttaccgaatg ctacagtcgc
     3721 tggtagagct tcccgtctac ctctcggggc gtgtcccggc gacgatccgc gagggcctga
     3781 gctatggacc gccgcgggtc atccccgtgg cgctgctcga tca
//
LOCUS       DATIFF010000557         4210 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_72001, whole genome shotgun sequence.
ACCESSION   DATIFF010000557 DATIFF010000000
VERSION     DATIFF010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4210
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72001"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(148..1449)
                     /locus_tag="VLD58_08220"
     CDS             complement(148..1449)
                     /locus_tag="VLD58_08220"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSB54328.1"
                     /translation="MPPVPPAGRPSTLRALRHRNYRLFFAGQSLSLVGTWITRIATSW
                     LIYRLTGSALLLGVLGFCGQIPTLFLAPVAGVFVDRWDRHRVLVVTQVLSMFQSLALA
                     VLALAGIITVPQVLGLQLLQGVINAFDTPARQAFVVQMIEDRADLPNAIALNSSMVNA
                     SRIIGPSIGGVLIAAVGEGGCFLADAISYLAVIASLLAMHVTRTPRGHAGTRVMEELR
                     AGFRYVTRFAPISTALLLLALVSTMGMPYTVLMPAVVAKTLHGGPHTLGMLMTASGVG
                     ALAGAFYLASRRTVLGLGRVIGIASAAFGAGLVVFGLSRALWLSLLVLPLVGAGFMVS
                     LAATNTVVQTVTEEHLRGRVMAFYTMAFLGTAPLGSLLAGVLADRVGERLTIVMGGLA
                     CLLGSAWFASRLPRLRELVRPIYARQGILAVREPDAPGQRL"
     gene            complement(1543..1613)
                     /locus_tag="VLD58_08225"
     tRNA            complement(1543..1613)
                     /locus_tag="VLD58_08225"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1579..1581),aa:Cys,seq:gca)
     gene            complement(1729..2073)
                     /locus_tag="VLD58_08230"
     CDS             complement(1729..2073)
                     /locus_tag="VLD58_08230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54329.1"
                     /translation="MDDAAADTICKRAMMELVFLLAHQRQPKTRQRRDWSLLRSLVRE
                     ALASGPRPDQLQEGPWHVGQRPLRKPGRHGLRFVPLVTRGATHIMMPTPAEAEELVAF
                     LNWCGMPELGER"
     gene            2132..2374
                     /locus_tag="VLD58_08235"
     CDS             2132..2374
                     /locus_tag="VLD58_08235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54330.1"
                     /translation="MQSTIREARLKPEYASLYPGVQPGVWMPASAIGQQLLLWHLTAP
                     ATPQGERLMAEEHFEFRGGQKRVGSWINMRTRLADG"
     gene            complement(2403..3977)
                     /locus_tag="VLD58_08240"
     CDS             complement(2403..3977)
                     /locus_tag="VLD58_08240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54331.1"
                     /translation="MNRKLRIGVIDLIARGPSRALYARVMNANLASIMPQVIAVWCER
                     QGHEVTYVTYTGFEDLVSELPLEADLVFIGSFTQSAQLAYALSNLFRSRGAVTVLGGP
                     HARCYPEDACRYFDYVLGFTDRSVVSDLLRDCRPHRPVGVHLSAPTQPVELPTLRERW
                     KFTEATLRKAPTIKIVPMVGSLGCPYTCSFCIDSTVDYQPLGFDDLRDDLAFLLTKIK
                     NPIVGWHDPNFGVRFDDYMEAVEAAVPPGRMRHIAESSLSLLSEPHLQRLRKNGFRAI
                     LPGIESWYDLGNKSKTRQKGMDKVRLVADHVNMILRYIPYIQTNFVLGLDGDMGPEPF
                     ELTKTFIDLAPGAFPAYSLLSAFGRAAPSNLDYQRADRVLPFPFHFLNNNHAMNVRPK
                     NYSWTEFYDGLIDVTSYSFSWRAIARRIPATATAIPKWMNFVRAVSSEGFGRIQYHTT
                     IRRLLDTDASVRGYFEGETTELPEFYLNRVRQELGPMFDYLPAGALYHDQNAYLGTVI
                     EEPAMAPVPLRSRRAG"
BASE COUNT          697 a         1403 c         1495 g          615 t
ORIGIN      
        1 ccaccccgcc gggcggcggc gttcacggca tgggcggcta ccatgccgcc cgcacggccc
       61 tggccgattt ccgctgacgg caccccggcg ctacccgcat gcgcggcgcc ctgcgtgcgc
      121 ccgcgtcgcg ggacatgatg accggcgtca taatcgctgg ccgggtgcgt ccggctcacg
      181 gaccgcgagg atgccctgcc gggcgtagat ggggcgcacc aattcgcgca accgtggcag
      241 ccggctcgcg aaccaggccg accccagcag gcaggcgagg ccgcccatga cgatcgtgag
      301 ccgctcgccg acccgatcgg ccagcacgcc ggccagcaga ctcccgagcg gcgcggtgcc
      361 gaggaacgcc atggtgtaga acgccatgac gcggccgcgc aggtgctcct cggtgacggt
      421 ctgcacgacg gtgttggtcg cggcgagcga caccatgaac ccggccccga cgagcgggag
      481 gacgagcagc gagagccaga gggctctcga cagcccgaag acgaccagcc ccgcgccgaa
      541 ggccgccgag gcgatgccga tcacgcgtcc gagccccagc accgtccggc gcgacgccag
      601 atagaaggcg cccgcgagcg ccccgacgcc ggaggccgtc atcagcatcc ccagcgtgtg
      661 gggaccgccg tgcagggtct tggcgacgac ggcaggcatg agcaccgtgt acggcatgcc
      721 catcgtgctc acgagcgcca gcagcagcag cgcggtgctg atgggggcga accgggtgac
      781 gtaccggaag ccggcgcgga gctcttccat gaccctggtg cccgcgtgcc cgcgtggggt
      841 ccgggtcacg tgcatggcca gcagcgaggc gatcacggcg aggtaggaga tcgcgtccgc
      901 gagaaagcac ccgccctccc ccacggccgc gatgagcacg ccgccgatcg aagggccgat
      961 gatcctgctg gcgttcacca tcgacgagtt gagcgcgatg gcgttcggca ggtcggcccg
     1021 atcttcgatc atctgcacga cgaaggcctg tcgggccggg gtgtcgaagg cgttgatgac
     1081 cccttggagc agctggagcc cgagtacctg gggcaccgtg atgatcccgg ccagggccag
     1141 cacggcgaga gcgagcgact gaaacatcga gaggacctgg gtgaccacca gcacgcggtg
     1201 ccggtcccac cggtccacga acacgcccgc gacgggggcc aggaacagcg tcggaatctg
     1261 gccgcagaac ccgagcacgc cgagcagcag cgccgatccc gtgaggcgat agatcagcca
     1321 actcgtcgcg atgcgcgtga tccaggtgcc cacgagcgag aggctctgcc cggcaaagaa
     1381 cagccggtag ttgcggtgtc gcagcgcgcg gagcgtggag ggacgaccgg cggggggcac
     1441 ggggggcatg tcggggctca cttcgacgtg tgccctggcc gcctcgtggt gcgtgggcta
     1501 tgtggcggca gcgctggcgg ttcgggagcc gggagagcgg agaggcgccg atcggaatcg
     1561 aaccgatgat ggaggttttg cagacctctg ccttaccact tggctacggc gccggggcgg
     1621 ggaaagatag ccgattcggc aggccgagta acccccgtcc agcggaatcg gcctcttccc
     1681 cccggcgcct tcccgcagca tcttcggcgc tggcagctcc gccgatcctc aacgctcccc
     1741 gagttccggc atgccgcacc agttcaggaa ggccaccagc tcttcggcct ccgcgggtgt
     1801 cggcatcatg atgtgggtgg cgccccgcgt caccagcggc acgaaccgca ggccatgacg
     1861 tcccggtttc cggagcggac gctggccgac gtgccacggt ccctcctgca gctggtctgg
     1921 gcgagggccc gaggccagcg cctcccggac caggctgcgc agcagcgacc agtcgcggcg
     1981 ctgcctggtc ttcggctgcc gctggtgcgc caggaggaag accagctcca tcatggcgcg
     2041 cttgcagatc gtgtcggccg ccgcgtcgtc catgaccatc aagagagcgg cgaccggatt
     2101 cagcgtcaac cctgcgtcag gagactgcgg cgtgcagagc accatccgcg aagcccggct
     2161 caagcccgag tacgcgtcgc tctaccccgg cgtgcagccc ggggtctgga tgcccgcctc
     2221 ggcgatcggc cagcaactgc tgctctggca cctcaccgcg ccggccaccc cccaggggga
     2281 gcgtctgatg gcggaggaac acttcgaatt ccggggcggc cagaagcggg tcggctcctg
     2341 gatcaacatg cggacgcggc tcgcggacgg ctgagcccgg cctcggccgg gcccgtcgat
     2401 cgtcagccgg cccgtcggct cctcagcgga accggcgcca tggcgggctc ctcgatgacc
     2461 gttccgaggt aggcgttctg gtcgtggtac agcgcacccg ccgggaggta gtcgaacatc
     2521 ggccccagct cctgccggac ccggttcagg taaaactccg gcagctccgt cgtttcccct
     2581 tcgaaatagc ctcgtaccga ggcgtcggta tcgagcaggc gccggatcgt cgtgtggtac
     2641 tggatccggc cgaacccctc ggacgacacc gccctgacga agttcatcca cttcgggatg
     2701 gccgtggcgg tcgcggggat gcgccgagcg atcgcccgcc atgagaagga gtagctggtc
     2761 acgtcgatga ggccgtcgta gaactcggtc cagctgtagt tcttcggccg gacgttcatc
     2821 gcatggttgt tgttgaggaa atggaacggg aagggcagga cgcggtcggc gcgctggtag
     2881 tccagattcg acggtgcggc ccggccgaat gccgagagca gtgagtaggc cgggaaggcg
     2941 ccgggcgcca ggtcgatgaa cgtcttggtc agctcgaacg gctccgggcc catgtctccg
     3001 tccagcccga gcacgaagtt ggtctggatg tacgggatgt agcgcaggat catgttcacg
     3061 tgatccgcga ccagccggac cttgtccatc cccttctgcc gcgtcttgga tttgttgccc
     3121 aggtcgtacc acgactcgat gccgggaaga atggctcgga acccgttctt ccggagtcgc
     3181 tggaggtgcg gctcggagag gagcgagagg ctgctctcgg cgatgtggcg catgcgtccg
     3241 ggcgggaccg ccgcctcgac cgcctccatg tagtcgtcga accgcacgcc gaagttgggg
     3301 tcgtgccagc ccacgatggg attcttgatc ttggtaagca ggaaggccag gtcgtcgcgc
     3361 aggtcgtcga agccgagcgg ctggtagtcc accgtcgaat cgatgcagaa actgcaggtg
     3421 tacgggcacc ccaggctgcc gaccatgggc acgatcttga tggtgggggc cttgcggagg
     3481 gtggcctcgg tgaacttcca ccgctcgcgc agcgtcggca gctcgaccgg ctgggtcggc
     3541 gcggagaggt ggacgccgac cggccggtgg ggccggcagt cgcgcagcag atccgacacc
     3601 acgctccggt cggtgaatcc caggacgtag tcgaagtacc ggcaggcgtc ctcgggatag
     3661 caccgggcgt gcggcccgcc cagcaccgtc accgcccccc ggctgcggaa caggttgctc
     3721 agcgcgtagg ccagctgggc ggactgcgtg aaggacccga tgaagaccag gtccgcctcc
     3781 agcggcagct cgctcaccag gtcctcgaag cccgtgtagg tcacgtaggt gacctcgtgc
     3841 ccctggcgct cgcaccacac cgcgatcacc tggggcatga tgctggccag gttggcgttc
     3901 atcacccgcg cgtagagggc gcggctgggg ccgcgcgcga tcaggtcgat gacgccgatt
     3961 cgcagcttcc tgttcatccc gccgtccttt cctcggtccg tccatggagg cagcggcgct
     4021 cagcgtgccg catgccggtc gagtacgatg gctggatgcc cttcgactag atgatgagac
     4081 tacggatgtc gacgaaacgc cgcccgacga gaggcgcgac gaattggggg agccgccaca
     4141 aggattggga actatagcac gccccgggag gagtagagcg tgggcaccgc gaacaatgtg
     4201 accgcggtgg
//
LOCUS       DATIFF010000558         3695 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2224786, whole genome shotgun sequence.
ACCESSION   DATIFF010000558 DATIFF010000000
VERSION     DATIFF010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3695
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2224786"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..310
                     /locus_tag="VLD58_08245"
     CDS             <1..310
                     /locus_tag="VLD58_08245"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB54332.1"
                     /translation="VLLLAWVDDVPAGCAGLRPIAPGSCELKRLYVRPAYRGRGLARR
                     LTEAVLAEARSRGYERIMLDTLPNMVEAQRLYRTLGFREIEPYRMNPVPGAKYLELGL
                     "
     gene            389..565
                     /locus_tag="VLD58_08250"
     CDS             389..565
                     /locus_tag="VLD58_08250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54333.1"
                     /translation="MSKREDQRIAALAKKNAAKVVPPKQERATKFDPTLRQRQPDEDA
                     ETQRLFKEMKRREF"
     gene            576..737
                     /locus_tag="VLD58_08255"
     CDS             576..737
                     /locus_tag="VLD58_08255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54334.1"
                     /translation="MNKLLGFVGATVGGSIGWWLGQRAGIMTAFLVSVVGTGAGMYAA
                     RRLFSDYLS"
     gene            1027..1308
                     /locus_tag="VLD58_08260"
     CDS             1027..1308
                     /locus_tag="VLD58_08260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54335.1"
                     /translation="MTLPKGVCTDPAGGPSTDVLYVTFLARSQPAEREAAVKVVHGTI
                     VAPDPDDAASAYVRAPSDGNEFVLRAIADRLIRVPVVKEVGPVQCPVGQ"
     gene            1290..1952
                     /locus_tag="VLD58_08265"
     CDS             1290..1952
                     /locus_tag="VLD58_08265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54336.1"
                     /translation="MSRWPVTSTGLVPLATERTTAATDLILALVVVGGILWLWRAAPP
                     GWRRAVWLVALAAFGASALLGAAAHGLALAGRLPGMLWQALYFLLGMAVALFIAGALA
                     DWRGEAEARGKLPALLIVAALFYLATRLTGGDFRVFLVFEGTALVFALAVYGALGVRG
                     RAGAGTVAAAMALSLAAGVIQAMSSLSVRLGWEFDHNGLYHLVQIVGVVVLIRGLAIV
                     LR"
     gene            2020..2502
                     /locus_tag="VLD58_08270"
     CDS             2020..2502
                     /locus_tag="VLD58_08270"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB54337.1"
                     /translation="MTVRLRTAGTADLPFVLSLAPRLAEFGLPPWRAPGDVVEAERRA
                     LSRALEAGSPDAPVLLAEDADGSALGFAYLETQTDYFTGRPHAHIAVLAVAERAQGRG
                     VGRALLRAAEEWARRRGDPFISLNVFAQNTRARTVYEHLGYGPETLRYVKALERDAAP
                     "
     gene            2516..2998
                     /locus_tag="VLD58_08275"
     CDS             2516..2998
                     /locus_tag="VLD58_08275"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HSB54338.1"
                     /translation="MPDQPDRRMPDHPDVRVPPPLLYVSVLGIGLLVQQVAPLPLIPP
                     AVGHPLAIACAAGWVGLMAWGVGSFRRARTSLVPLRPATALITDGPFRFTRNPLYLSL
                     ALLYLGIALWLGVFWPIVLVPALLLLVQQVVILREEAYLESRFGEAYRAYRARVRRWL
                     "
     gene            3092..3616
                     /locus_tag="VLD58_08280"
     CDS             3092..3616
                     /locus_tag="VLD58_08280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HSB54339.1"
                     /translation="MEFEVSDAIRVLSRTPAVVRTLLADLPDAWLRSTEAPDTWSPFD
                     VVGHLIDGEETDWIPRARIILARGPNPAFEPFDRFRHQRLNRGTPAAVLLDQFARLRS
                     ENLNVLKEFQLTPAELALEGLHPELGRVTLQQLLATWVAHDLGHVGQIVRVMAKQYGH
                     EVGPWRAYLPVLTQ"
BASE COUNT          483 a         1346 c         1239 g          627 t
ORIGIN      
        1 tgtgctgctc ctggcctggg tagacgacgt gccggcaggc tgtgccggcc tccgaccgat
       61 cgcgcccggc tcctgcgagc tcaagcgcct gtacgtgcgg cccgcctatc ggggccgggg
      121 tctggcccgg cgcctcaccg aggcggtcct cgccgaggcc cgcagccgag gctacgagcg
      181 gatcatgctg gacaccctgc caaacatggt cgaggcgcag cgtctgtacc ggaccttggg
      241 cttccgcgag atcgagccct atcggatgaa tccggtccca ggagccaagt acctggagtt
      301 gggactctag cggcggagag ggcgtgggag tggcaccggg cagcccgtcc gcctacactc
      361 cggaatacca catgagcggg agatccgaat gtcgaagcgc gaagatcagc gcatcgccgc
      421 cctggcaaag aagaacgccg ccaaggtagt gccgccgaag caggagcggg ccaccaagtt
      481 cgatccgacg ctgcgccaac gccagccgga cgaggacgcc gagacccagc gcctcttcaa
      541 ggaaatgaag cgccgggaat tctgagaggc cgcccatgaa caagctcctc ggcttcgtcg
      601 gggcaacggt cggtggaagc atcggctggt ggctgggtca gcgtgcaggg atcatgaccg
      661 cgttcctggt gagcgtggtc ggaaccggcg cgggcatgta tgcggcgcgt cgcctcttct
      721 ccgactacct gagttagctc gaccatggcg tcgcgcctcc cggtatccgc ccgtctcctc
      781 ccgtgtctcc tgatcctcgc cggggcggcg ccctgccgcg cgcagacggt catccctccc
      841 gacaccgcgc ccacggcgac ccgctccgcc ccggggcccc cgtcctcccg cagcggcgct
      901 gacagcctgc ggggtacgcg ggacaccgtg gcgaagtccg gcggccgcgc tgacagtgcc
      961 gccaaaccgg ttgcagcgcc cccgcctccg gcgcccccag ccgcggcgcc cccagccgcg
     1021 ccggtcttga cactccccaa gggcgtctgc accgaccccg ccggcggccc gtccaccgac
     1081 gtgctctacg tgacgttcct ggcgcggtcc cagccggccg agcgggaggc cgcggtcaaa
     1141 gtggtgcacg gcacgatcgt ggcacccgat cctgacgacg ccgcctcggc ctatgtgcgg
     1201 gccccgagcg atggaaacga gttcgtcctg cgcgccatcg cggatcgcct gatccgggtc
     1261 ccggtcgtca aggaggtagg gccggtccag tgtcccgttg gccagtgacg agcaccggcc
     1321 tcgtccctct cgccactgaa cgcaccaccg ccgccaccga tcttatcctc gccctcgtgg
     1381 tcgtcggggg cattttgtgg ctttggcggg ctgcgcctcc cggctggcgc cgggccgtct
     1441 ggctcgtcgc gctcgctgcc ttcggggctt ccgcgctcct tggcgcagcc gcgcacgggc
     1501 tggcgctcgc cggccggctc ccgggcatgc tctggcaggc actctacttc ctgcttggca
     1561 tggcggtagc gctgttcatc gcgggtgccc tggcggactg gcgtggagag gcggaggcgc
     1621 gcgggaagct gccggcgctg ctgatcgtcg cggccctctt ctacctggcc acgcggctca
     1681 ccggcgggga ttttcgcgtc ttcctggtgt tcgaagggac tgcgctggtt tttgccctcg
     1741 ccgtgtacgg cgccctgggc gtgcgggggc gggcgggcgc gggcacggtc gctgccgcga
     1801 tggccctctc cctcgcggcg ggcgtcatcc aggccatgtc ctcgctctcg gtgcggctcg
     1861 gctgggagtt cgaccacaac ggcctctacc atcttgtgca aatagtcggt gtcgtcgtgc
     1921 tgatccgcgg gctggccatc gtgctccggt aggccgcagc acccttgctc gaatgccgtt
     1981 cggccttcta cttgtagctc agccagccga ggaaccctca tgaccgtccg gcttcgcacc
     2041 gcggggacgg ccgacttgcc tttcgtgctc tcgctcgcac cccgcctcgc cgagttcggc
     2101 ctgccgccct ggcgagcccc gggtgatgtc gtggaggcgg agcggcgggc gctgagccgc
     2161 gccctggaag ccggctcgcc cgatgccccc gtcctccttg ccgaggatgc ggacggctcc
     2221 gccttgggct ttgcgtatct ggagacccag accgactact tcaccggccg gcctcacgcg
     2281 cacatcgccg tgctagcggt ggcggagcgt gcccagggtc ggggtgtggg ccgggccctg
     2341 ctgcgcgcgg ccgaggagtg ggcccgtcgc cgcggagatc cgttcatcag cctgaacgtg
     2401 ttcgcgcaga acacccgggc gcggacggtg tacgagcacc tcgggtacgg ccccgagacc
     2461 ttgcgctatg tgaaggctct ggagcgcgac gctgcgccct gacgtggagg agcccatgcc
     2521 ggaccagccc gaccgccgga tgcccgacca tccggacgtc cgagttccgc ccccgttgct
     2581 gtatgtctca gtgctcggca tcggcctgct cgtgcaacag gtggcgccgc tgccgctgat
     2641 cccgcctgcg gtcggccacc ccctcgcgat cgcctgcgcc gcgggttggg tcggcctcat
     2701 ggcgtggggc gttggctcgt tccgccgggc gcggacgtcc ctcgtccccc ttcgcccggc
     2761 cacggccctc atcaccgatg gtccgttccg gttcacccgg aaccccctct acctcagtct
     2821 ggctctcctc tacctcggca tcgccctctg gcttggcgtc ttctggccca tcgtactggt
     2881 cccggctctc ctgctcctgg tccagcaggt cgtgatcctc cgcgaagagg catatctcga
     2941 gagcaggttc ggcgaggcct accgggcgta ccgggcccgg gtccggcggt ggctctaacc
     3001 tgcgaccggg gagccggtaa cgaatccgtc gattccatcg tagggtcggc acgcgtgggc
     3061 ctgagcccgt gatcccagca aggagccctt gatggagttc gaggttagcg acgcgatcag
     3121 ggtgctgagc cgcacccccg ccgtcgttcg caccctcctg gccgacctgc ccgacgcctg
     3181 gctgcgtagc accgaggcgc cggacacctg gagcccgttc gacgtggtcg gccacctgat
     3241 cgacggcgaa gagaccgact ggataccccg cgcccggatc atccttgccc ggggaccgaa
     3301 ccccgccttc gaaccgttcg accggttccg ccatcagcgg ctcaaccgcg gcactccggc
     3361 ggccgtgctg ctcgaccagt tcgcccggct gcggtcggag aatctcaacg tgctgaaaga
     3421 gttccaactg acgccggccg agctggcgct cgagggcctc catcccgaac tcggccgagt
     3481 cactctccag cagctcctcg ctacctgggt ggcccacgat ctcggtcacg taggccagat
     3541 agtgcgggtg atggcaaagc agtacggcca cgaagtcggg ccgtggcggg cctacctccc
     3601 tgtgctcacg caataggggc tcgcgcgacg ggacttgacc ggcgctcggg gaccgctgct
     3661 accttgtttt cttttcgttc ttactcgagc cccca
//
LOCUS       DATIFF010000559         7024 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_995229, whole genome shotgun sequence.
ACCESSION   DATIFF010000559 DATIFF010000000
VERSION     DATIFF010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7024
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_995229"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(156..611)
                     /locus_tag="VLD58_08285"
     CDS             complement(156..611)
                     /locus_tag="VLD58_08285"
                     /inference="COORDINATES: protein motif:HMM:NF015004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine dimer DNA glycosylase/endonuclease V"
                     /protein_id="HSB54340.1"
                     /translation="MRLWSLHPKYLDRQGLTALWREGLLAQAVLRGRTRGYRAHPQLE
                     RFRASRRPVALIATYLDAVWEEARRRGYHFDRRRIAGRPVPDRLATPRGQLRWEWGHL
                     QRKLRQRSPGIYKRWLGVGFPEAHPMCRLVPGGPAGWERGIAAANRGAR"
     gene            complement(650..1117)
                     /locus_tag="VLD58_08290"
     CDS             complement(650..1117)
                     /locus_tag="VLD58_08290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54341.1"
                     /translation="MNTPVSQGARDMKPRTMLTITSLLTILFLIFHMTDDILREGGMA
                     VGGTRNLTVVVVLAIFLYGTLVLAGRRSGQIITLIAGLAGLGMPVLHMALARTVIAND
                     LARARGDYLFVWTLLAVGVTGLFTLVLSARSLWNPQWGQSRSPGAGEPERRPA"
     gene            complement(1220..1780)
                     /locus_tag="VLD58_08295"
     CDS             complement(1220..1780)
                     /locus_tag="VLD58_08295"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSB54342.1"
                     /translation="MSLIEHLFGRSIFPPRYAWFLEGRWRRLVLSPERLRRRLTLSPG
                     MTVLEIGVGGGYYARPLAGLVRRFIGLDVQAAMLRRLRARFVDARLVLVQGDAAHLPI
                     APHSIDVVLAVTVLGEIRRLEEALEEIRRVLRPGGLFSVSEHWPDPDFLSFARVSRLC
                     RASGMRFQERYGSRFNYTASFRANAP"
     gene            complement(1811..2431)
                     /locus_tag="VLD58_08300"
     CDS             complement(1811..2431)
                     /locus_tag="VLD58_08300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54343.1"
                     /translation="MPAESRDPDATGRLAVALAGMGVFNASTIILMYAGLPVFGPLND
                     LGVGTAAILQAMLAWRLRSRLGAPPLRIAVAAAAIGAAVAVVGSGLVISGATDWFVAG
                     IVSTLGYAFLGIWLVSANRRARTKNSWPAPLASFGLLTGAITCSGFLALPAVGSGAGS
                     PASAPWYVWAAYANGVGWFVLLPVWNFRLGRHLKRGSEGARGSPAA"
     gene            complement(2579..3160)
                     /locus_tag="VLD58_08305"
     CDS             complement(2579..3160)
                     /locus_tag="VLD58_08305"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HSB54344.1"
                     /translation="MRPLPFVWPYAPVFWVAFAWAFWPEFRIVRRAQRSADVKDARSL
                     QVILFAQGGASLAAWPLAWVRALQFPWPQGGVFFAGVAILIAGSLLRRHCWRMLGSSF
                     TGDVRASAEQAIVTRGAYSILRHPAYTAGILMNTGFGIALGSWASAGVLAVATTAGYL
                     YRIAVEERALVGALGEPYREFMRTRKRLIPFVY"
     gene            complement(3330..3707)
                     /locus_tag="VLD58_08310"
     CDS             complement(3330..3707)
                     /locus_tag="VLD58_08310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54345.1"
                     /translation="MPNSKRIGALVGPAIVAMVASEFPLVQPHLYDAQIPPVVYLSGT
                     LMFVGGLAIVRAHNSWVRNWTVLVTLSGWFFLVLGLFRMFAAGAYQRGSTNTSATTFM
                     VLEGALLIPGLVMTIKSYGPSEG"
     gene            complement(3789..4535)
                     /locus_tag="VLD58_08315"
     CDS             complement(3789..4535)
                     /locus_tag="VLD58_08315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54346.1"
                     /translation="MPLPSRLAAALALVALPVAELPAQSFAGRVLIEDRPADPGTYVQ
                     VVVYRADRSFTVCGDTTVGTGGRYQLVVYPKPDCRTPGDRYEFYVNGVWAASRSAAST
                     TPGGPPVPTDMTAPMLALRTSNRPGVRLVWFYGTVTDPRSRPAPVGIRIVASPDTSVS
                     AGNSCLGTGLTQDLFWTPKTPGAQPLNVKGFYVIGIEMAAECQDMVTLFQLRGAGGSP
                     GTVTPQTVLVDTPPYGLPSRKNLVLRANPD"
     gene            complement(4600..4821)
                     /locus_tag="VLD58_08320"
     CDS             complement(4600..4821)
                     /locus_tag="VLD58_08320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54347.1"
                     /translation="MGLISHLQALSHGRLISARLHVSARTLLLTWWLALHAAVVAWFA
                     TLAAAILPGGAFLALASQGHRGTPPAADA"
     gene            complement(4954..5397)
                     /locus_tag="VLD58_08325"
     CDS             complement(4954..5397)
                     /locus_tag="VLD58_08325"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB54348.1"
                     /translation="MSSVLFSAYQPGDRTACLQLFDANSPAYFAPNERDEYAAFLETA
                     PGMYELCRRGDRIVGAFGVQPAGASDAHLRWILLAPDAQGQGIGTAIMRRVAELARAQ
                     GRPLVRIAASQKSAPFFTRFGASITTSTRDGWGPGMDRIDLEWRP"
     gene            complement(5427..5906)
                     /locus_tag="VLD58_08330"
     CDS             complement(5427..5906)
                     /locus_tag="VLD58_08330"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSB54349.1"
                     /translation="MEDILEGLLRQDDTAQLSRRDLLGALATLVTSRSLAQTPRGAAP
                     FRTMELNHVTLRVSDLDRSKKFYQALLGLPVLKEDKDLCYLGTGRGFLALWRVEGAET
                     VGADHWCVGLDRFDREAARARLEAAGYHLRHDPDDSTLYVLDPDGLTVQLEAEGFKA"
     gene            complement(5937..6482)
                     /locus_tag="VLD58_08335"
     CDS             complement(5937..6482)
                     /locus_tag="VLD58_08335"
                     /inference="COORDINATES: protein motif:HMM:NF013695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HSB54350.1"
                     /translation="MGAALAAGSVALLGFGIDSFIEVAASGAAIWRLRVDYQADRRAK
                     AERRALQLIGASFLLLALYVAIDALHSLWRRTTPAESWLGIGVALGSLIIMPWLARRK
                     RAVAATLQSGALTAEARQTEICVYLSLILLIGLGVNLAVGWWWADPVAALAMVPLIMW
                     EGIEGLRGRSHCPDCAPTGVT"
     gene            complement(6663..>7024)
                     /locus_tag="VLD58_08340"
     CDS             complement(6663..>7024)
                     /locus_tag="VLD58_08340"
                     /inference="COORDINATES: protein motif:HMM:NF020253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycine cleavage T C-terminal barrel
                     domain-containing protein"
                     /protein_id="HSB54351.1"
                     /translation="GLERLVDFDMAGECVAMPALRRIRDRGVERRLAGITLDGAPFPA
                     LNFTKWPAHRDGRQVGKVTSAIYSPRLNQNIGYCWLPTRLAVPDTTVEVATEWGRRTA
                     TVTALPFVDPEKRIPVS"
BASE COUNT         1212 a         2343 c         2504 g          965 t
ORIGIN      
        1 gaggatccga tgccccgtgg atccgacttg aagcactcga tcatggcggt tcccgcgatc
       61 gtgctggtgc cggccggcga acccgcatga gcgggggccg cgggcgactt ggatggtaag
      121 gccgtgccgc tggcgaagcc agcatgcggc cggcgctacc tcgctccccg gttcgcggca
      181 gcgataccgc gttcccagcc ggcgggcccg cccggtacca gccggcacat gggatgagcc
      241 tcggggaagc cgaccccgag ccatcgcttg tagatgcccg gcgagcgctg ccgcagcttc
      301 cgttgcaggt gcccccactc ccaccgcagc tggcctcgtg gcgtcgcgag gcggtccggc
      361 accggacggc cggcgattcg ccggcggtcg aagtggtaac cccggcgccg cgcctcctcc
      421 cagaccgcgt ccaggtacgt ggcgatcagg gccacgggcc gccgcgaggc acggaatcgt
      481 tccagttgcg ggtgcgcgcg atacccgcgc gtcctgcccc ggagcacggc ttgcgcgagc
      541 agcccttccc gccacagggc ggtcaggccc tgacgatcga ggtacttggg gtgaagggac
      601 cagagccgca tgcgggttcc gggtcagcct cgggaatgat cgggctccgt catgcggggc
      661 gccgttccgg ctcgccggcg ccgggtgacc gcgactggcc ccattgcgga ttccacaggg
      721 atcgcgccga gaggacgagg gtgaagagcc cggtcacgcc gacggcaagc aacgtccaga
      781 cgaaaaggta gtccccccgg gcccgggcca ggtcgttcgc gatgacggtt cgcgccaggg
      841 ccatgtggag gacgggcatg cccagcccgg cgagccccgc gatgagcgtg atgatctgcc
      901 ccgatcgccg cccggcgagc accagggtgc catagaggaa gatcgccagg accacgacga
      961 cggtgagatt cctggtgcct cccacggcca ttccgccctc gcggaggatg tcgtccgtca
     1021 tatggaagat caggaagagg atcgtgagca gcgatgtgat cgtcaacatg gtcctgggtt
     1081 tcatgtcgcg ggctccctgc gagaccggcg tgttcatcta tgggtatccc atatgagact
     1141 agcccggaac cccggatccc gcaatcggac tcgcagaaca aggcgcatgc ccggccgatt
     1201 ccgtcgagcg ccggtgcggt cagggcgcat tggcgcggaa gctggccgtg tagttgaagc
     1261 ggctgccata tcgctcctgg aaccgcattc cgctcgcgcg acacagccgg ctcacccgag
     1321 cgaaggacag gaaatccggg tccggccagt gctcggacac ggagaagagg ccgccgggcc
     1381 gcagcacccg gcgaatctcc tccagagcct cctccaatcg ccggatctcg cccagcacgg
     1441 tgacggcgag gaccacgtcg atcgagtgcg gggcgatcgg cagatgagcc gcgtctccct
     1501 gcaccaggac caggcgggca tcgacgaacc gcgcgcgcag ccgccgcaac atcgccgcct
     1561 ggacgtcgag cccgatgaag cggcgtacca gcccggcgag cgggcgcgcg tagtagcctc
     1621 cgccaacgcc gatctccagg accgtcatgc cgggcgacag agtgaggcgc cgccgcagcc
     1681 gctcggggct cagcaccaga cgccgccagc gaccctccag aaaccacgca tagcgaggcg
     1741 ggaagatcga ccggccgaag aggtgctcga tcagagacat gagagcggcc ccgcctccgt
     1801 catgcgtggg tcaggcggcc ggcgaacctc tcgcgccctc cgaccctctc ttcaggtggc
     1861 ggccgaggcg gaagttccag accggcagga ggacgaacca tcccacgccg tttgcgtagg
     1921 ccgcccagac ataccatggg gcggatgcgg ggctccccgc accactcccg accgccggca
     1981 gcgcaagaaa gccggaacag gtgatcgcgc cggtgaggag cccgaaggag gccagggggg
     2041 caggccagga attcttcgtc cgggcgcgtc ggttggccga caccagccag atgccaagga
     2101 aggcgtaccc cagcgtcgaa acgatgccgg ccacaaacca gtcggtggcg cccgaaatca
     2161 ccaatccgga cccgacgaca gcgacagccg cgccgatcgc cgctgccgcg accgcgatcc
     2221 ggagcggggg ggccccgagc ctgctccgca accgccacgc gagcatggcc tgaaggatgg
     2281 cggcggtccc gaccccgagg tcattgagcg ggccgaacac cggcagtccc gcgtacatga
     2341 ggatgatcgt gctcgcgttg aagacgccca tgcccgccag ggcgaccgcg agacgacccg
     2401 tcgcatccgg atctcgggat tcggcaggca cggcgcctcc tgcgtggggc tgctggatgg
     2461 attgccccgg gccgcgagga gaaggaagct ggcgagggtg gcaatccggg gcagacgatc
     2521 cggcggatac tacggcgcaa cgagcgacaa ggccagcgaa cccggatccc taccgggttc
     2581 aatagacgaa cggaatcagg cgctttcgcg tgcgcatgaa ctcccggtag ggctccccga
     2641 gcgcgccgac cagcgccctt tcctcgaccg cgatgcgata caggtacccg gccgtggtgg
     2701 caacggcaag aaccccggcc gaggcccagc tgcccagcgc gatgccgaag ccggtattca
     2761 tcaggatgcc cgccgtatag gccggatgcc gaagtatcga gtaggcgccc cgcgtgacga
     2821 tcgcctgctc ggcgctcgct cgaacatcgc cggtgaacga cgacccgagc atgcgccagc
     2881 aatggcggcg cagaaggctg ccggcgatca ggatcgccac gccggcgaag aagacgccgc
     2941 cctggggcca ggggaattga agcgcgcgga cccaggcgag aggccaggcg gccagggatg
     3001 cgccgccctg agcgaagaga atcacctgaa gcgacctggc gtccttgacg tcggccgagc
     3061 gctgggcccg gcggacgatg cggaactcgg gccagaatgc ccaggcaaac gccacccaga
     3121 acaccggagc gtacggccag acgaacggca gcggcctcat cgttcctccc ttcgagggac
     3181 ctgtccctgg tgcctggtac tacgtaccgg aaaggggcct gatgatgcgc ttcgggcggg
     3241 ggaacgggtg atgcgccggg ttggccgcgg ccggccgtga tgaagcgccg cctcacgccg
     3301 ggtccggaag agcgtgcgtt cccccgtccc tagccctcgg acgggccgta cgacttgatg
     3361 gtcatcacga gtccgggaat cagcagagcg ccctccagga ccatgaatgt cgtggcggag
     3421 gtgttcgtgg agccgcgctg ataggcgccg gcggcgaaca tccggaagag accgagaacg
     3481 aggaagaacc accccgagag cgtgacgagg acggtccagt tgcggaccca gctgttgtgc
     3541 gcccgcacga tggcgaggcc cccgacgaac atcagggtgc ccgagagata gacgaccggc
     3601 ggaatctggg cgtcgtacag atggggttgg accagcggga actccgaggc gaccatcgcc
     3661 acgatcgcgg ggccaaccag ggcgccgatc cgcttcgagt tcggcatctc gcacctcccg
     3721 gtccccggcc aagcagactg acgaacacca ggcgctgctg acgcgccccg atcgctcctg
     3781 gcggtggttc agtccgggtt cgccctcagc accagattct tgcggcttgg cagtccgtat
     3841 ggcggcgtgt cgaccaggac ggtttgtggc gtaacggtgc ctgggctgcc gccggcaccg
     3901 cgcagctgga agagcgtcac catgtcctga cactccgcgg ccatctcgat gccgatcacg
     3961 tagaacccct tgacgttgag cggctgggcg cccggggtct tcggggtcca gaagaggtcc
     4021 tgggtcaacc ccgttccgag gcaggaattg cccgcactta cggaggtgtc cgggctggcg
     4081 acgatccgga tgccgacggg ggcggggcgg ctccgggggt cggtgaccgt cccgtagaac
     4141 cagaccagtc gcacgccggg ccggttcgag gtcctgagcg ccagcatcgg cgccgtcatg
     4201 tcggtcggga cgggcggccc gccgggggtg gtcgaggcgg ccgatcggct cgccgcccac
     4261 acgccgttga cgtagaactc gtagcggtcg cccggggtgc ggcaatccgg tttcgggtac
     4321 accacgagct ggtatcgccc gcccgtgccg acggtcgtgt cgccacagac ggtgaacgag
     4381 cgatcggcgc ggtagacgac cacctgcacg taggtcccgg ggtcggccgg gcggtcttcg
     4441 atcaggacgc ggccggcgaa cgactgggcg gggagctccg ccaccggcaa ggcgacgagc
     4501 gcgagcgcgg cagccaggcg ggagggcaat ggcatgggag aaatcctacc gttcgggagc
     4561 gaatcgcgcg agcgcggccc cggttgactc gggcaaaggt caggcgtcgg cggcaggggg
     4621 agtgccccgg tgaccctggc tcgcaagggc caggaaggcg cctccgggga gaatggctgc
     4681 ggcgagggtt gcgaaccacg ccacgacggc ggcgtggagc gccagccacc aggtgaggag
     4741 gagggtccgg gcgctgacgt ggagccgagc agaaatcagc ctgccgtggg agagggcctg
     4801 gaggtggctg atgagcccca tgcgggggtt ggccagccgg ggatggcgcg cccggtgagg
     4861 gagaaggatg ggtgcccgtc gtccacccgg cgagcacgcg ggggccggct cgttcgtcgt
     4921 cgcgctggcg ggcccttcgc ggatgatccg ccctcagggc cgccattcca ggtcgatgcg
     4981 atccatcccg ggcccccacc catcccgggt ggaggtcgtg atcgacgcgc cgaacctggt
     5041 gaagaacggc gccgacttct gactggcggc gatccggacc agcgggcggc cctgggcccg
     5101 tgcgagctcc gcgacacggc gcatgatggc ggtgccgatc ccctgcccct gggcgtcggg
     5161 cgccagcagg atccagcgaa ggtgggcgtc ggaggcaccg gccggttgca caccgaatgc
     5221 cccgacgatc cgatcgcccc ggcgacagag ctcatacatg ccgggtgccg tctcgaggaa
     5281 ggcggcgtac tcgtcccgct cgttcggggc gaagtaggcc ggtgaattgg catcgaacag
     5341 ctggaggcag gcggttcgat cacccggctg gtaggccgag aacaggacgg agctcatcac
     5401 tgggccatcg cggggcagcg gggcttctat gccttgaatc cttccgcttc cagttggaca
     5461 gtcagaccat ccgggtccaa tacatagagc gtggaatcat cggggtcgtg ccgcagatga
     5521 tagcccgcgg cttcgagccg tgctcgggcg gcttcccgat cgaagcggtc gaggcccacg
     5581 caccaatgat cggcacccac tgtctcggcg ccctcgaccc gccaaagcgc gaggaacccg
     5641 cggcccgtcc caaggtagca caagtcctta tcctctttga gtaccggcag gccgaggagg
     5701 gcctggtaga atttcttcga gcggtccaga tcgctcactc gtagggtcac gtggttcagt
     5761 tccatggtgc ggaacggcgc ggcgccgcgc ggtgtttggg ccagggaacg agatgtgacc
     5821 aaggttgcga gagcgccgag caagtcgcgg cggctcagtt gcgccgtgtc gtcctggcga
     5881 agcaggcctt ccaggatgtc ttccacggcc cctcccaggt tgtgtccgtg cgattctcag
     5941 gtaaccccgg tcggggcgca atcggggcag tggctgcgcc cgcgcagccc ttcgatccct
     6001 tcccacatga tgaggggaac catggccagg gcggccacgg ggtccgccca ccaccagccg
     6061 acggccaggt tgacgcccag accgatcaac aggatgaggg acaggtagac gcaaatctcc
     6121 gtttgccgcg cctccgccgt cagggcgccg ctctggagcg tcgcggccac cgcgcgcttg
     6181 cgccgtgcca gccacggcat gatgatgagc gatcccaacg ccactccgat tccaagccag
     6241 ctctcggccg gcgtggtccg tcgccacagt gaatggaggg cgtcgatggc cacgtacagc
     6301 gccaacagca gaaacgatgc cccgatcagc tgcaacgccc ggcgctcggc tttggcgcgg
     6361 cgatccgcct ggtaatcgac ccgcaggcgc cagatggcgg caccgctcgc cgccacttcg
     6421 atgaagctgt cgatgccgaa cccgaggagt gccacactgc ctgcggccag cgcggcgccc
     6481 accgccagga tcccttcgag ggtgttgtag gcgagagtgg cccgggtcag ccattggcct
     6541 ctccggacga ggtcccctcg ggcgggactg ggaatgccgg ttacgcgcac ggatccatca
     6601 ttgggggctc gggctgtctg acgcactgcg catgagctgc agggccacgg cgcgcccggg
     6661 cgctaggaga ccggaatccg cttctctggg tcaacgaacg gcagagcggt gacggtggcg
     6721 gtacgcctac cccactcggt ggccacttca acggtggtgt ccgggacggc gagccgggtg
     6781 gggagccagc agtagccgat gttctgattg agccgggggg agtagatcgc cgaggtcacc
     6841 tttcccacct gacggccgtc acggtgggcc ggccacttcg tgaagttcag ggccgggaaa
     6901 ggagcgccgt ccagcgtgat gccggcgagc cggcgctcca cgccgcgatc acgaatgcgg
     6961 cgaagggcgg gcattgccac gcattcgccg gccatgtcga aatccaccag ccgttcgagg
     7021 ccca
//
LOCUS       DATIFF010000560         1317 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1918114, whole genome shotgun sequence.
ACCESSION   DATIFF010000560 DATIFF010000000
VERSION     DATIFF010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1918114"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(96..623)
                     /locus_tag="VLD58_08345"
     CDS             complement(96..623)
                     /locus_tag="VLD58_08345"
                     /inference="COORDINATES: protein motif:HMM:NF025004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HSB54352.1"
                     /translation="MHRRELLRLLGTGALLPFLPGSLDHAIAFGREAHRAALAHDFEA
                     LSAAQAELVTTLADLILPRTDTPGASDVGVTAFIDHLLAHWYHDDERADFLAGLGAID
                     RLAGGRFVALAPAAQAEILTRIDGVKGEPGSAEAEFGKLKSLTVYGYFTSERVVKDVL
                     KSPLIPGHFDGCVKP"
     gene            853..>1317
                     /locus_tag="VLD58_08350"
     CDS             853..>1317
                     /locus_tag="VLD58_08350"
                     /inference="COORDINATES: protein motif:HMM:NF018178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HSB54353.1"
                     /translation="MPSNFPNRLTAEERREGWVLLFDGKTTKGWRGFRQRVAPRGWVV
                     ENGSLVREAGGGDLVTLRAYRNFELALEWKISEGGNSGIMYRVTEEGKETYETGPEMQ
                     VLDDARHADGKNRLTSAGACYGLYPSPEGVVHPAGEWNQVKIVVNGNHVEHWL"
BASE COUNT          219 a          415 c          473 g          210 t
ORIGIN      
        1 ctcgaggacc agggtctcga gcccgtgccg ggtgagctcc atcgccgccc agccgccgga
       61 aacgccggaa ccgatgacga tcgcgtccca ggtcttcatg gtttcacaca gccatcgaag
      121 tggccgggga tgaggggact cttgaggacg tccttcacca cccgttccga ggtgaagtag
      181 ccgtagactg tgagcgactt gagcttgccg aactcggcct cagcgctgcc gggttcgcct
      241 ttgacgccgt cgatccgggt caggatctcg gcctgggccg cgggcgcgag ggcgacgaac
      301 ctccccccgg ccaggcggtc gatcgcgccc agcccggcca ggaagtcggc gcgctcgtcg
      361 tcatggtacc agtgggccag caggtgatcg atgaaggcgg tgacacccac gtcggaggcg
      421 cccggggtat cggtacgggg aaggatcagg tcggccaggg tggtcaccag ctccgcctgg
      481 gcggccgaca aggcctcgaa atcgtgggcc agcgccgccc ggtgggcctc gcggccgaag
      541 gcgatggcgt ggtccagtga accggggagg aacggaagaa gcgcgccggt gccgagcagc
      601 cggaggagct cgcgtcgatg catgaccggc aggttactgc tccttggcga gcttcgccag
      661 taggccgacc cttccgccgg ctcgatggcc gccgtatcgt tggggcctct ccccggcgcg
      721 gcagggcctc cattcacacg gccgggccag tctcttccgt cgaggtctga aactacgatg
      781 tcaaagcgga tgctattcgc tctgctcccc gctgtgttcg ccgccgctcc tcttgctctg
      841 acagctcaag ccgtgccgtc caactttccc aatcgcctca ccgccgagga gcggcgcgag
      901 gggtgggtat tgttgttcga cggcaagacc accaaggggt ggcgcggttt ccggcagcgg
      961 gtagctccca ggggctgggt ggtggaaaac gggtcgctgg tgcgcgaagc cggcggcggt
     1021 gacctcgtca ccctgcgggc ctaccgcaat ttcgagctgg cgctggagtg gaagatctcg
     1081 gaaggcggca acagcgggat catgtatcgc gtgaccgaag aggggaagga gacctacgag
     1141 accgggcccg agatgcaggt gctggatgac gcgaggcatg ccgatggcaa gaaccggctg
     1201 acttccgcgg gggcctgcta cggcctgtac ccctcgcccg agggcgtggt gcatcccgcc
     1261 ggcgaatgga accaggtgaa gatcgtggtg aacggcaacc acgtggagca ctggctc
//
LOCUS       DATIFF010000561         1029 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_533089, whole genome shotgun sequence.
ACCESSION   DATIFF010000561 DATIFF010000000
VERSION     DATIFF010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_533089"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1029
                     /locus_tag="VLD58_08355"
     CDS             <1..>1029
                     /locus_tag="VLD58_08355"
                     /inference="COORDINATES: protein motif:HMM:NF026177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HSB54354.1"
                     /translation="YLDQSLRSGDRSSLLAQANEMREQAGADWALITGPDGVLEASTR
                     SPQAFGDSLGESALVGEALTGTAGVATQGIWIEATPAGDSLFQAVAVPLSSGGAVSGT
                     LVLALAIDSAFAVGLKRHTASEVVFITFDTAGVPRVATSTLPAGTLDEALRKRYPGGS
                     SEPDSIPSRLTVEAGGLTWVAAAGPLTTSSGRIVGEYAGLRSREAELAPFDALQRSIL
                     IAFLGALAIALVISLVLARQITRPLSRLVAMTRDVAEGRYSGEVKVTSRDEIGELADA
                     FRGMLAELREKQRLVEFLGGTGANTLQVPGPIGGAPTAASPVPVTGFLRPGAMLANRY
                     EIRQQLGSG"
BASE COUNT          138 a          362 c          364 g          165 t
ORIGIN      
        1 tacctcgatc agtcactccg ctcgggcgac cgcagcagcc tgctcgcgca ggcgaacgag
       61 atgcgggaac aggccggggc cgattgggcc ctgatcaccg ggccggacgg cgtgctcgag
      121 gcgtcgactc gctcgcccca ggcctttggc gactcgctgg gagaatccgc tctggtgggc
      181 gaggcgctta ccgggacagc gggggtcgcc acccagggca tctggatcga ggcgaccccc
      241 gccggcgatt cgctcttcca ggcggtggcc gtaccgctgt cctctggcgg cgccgtatcc
      301 ggcaccctgg tcctggcgct cgccatcgac agcgccttcg ccgtagggct caagcgccat
      361 accgcatccg aggtcgtgtt catcacgttc gacacggctg gggtgccgag ggttgccacc
      421 tccacgctgc ccgcgggaac gctcgacgag gcgctccgca aacgctatcc cggcggcagc
      481 agcgagcctg attcgatccc gagtcgcctt accgtcgaag ccggcgggct cacctgggtg
      541 gccgcggccg gtccgctcac cacgtcctcc ggccggatcg taggcgagta cgccggtctc
      601 cgttcccgcg aggccgagct ggcgccgttc gatgcgctgc agcgttcgat cctcatcgcc
      661 ttcctcggcg cgctggccat cgcgctggtg atctcgctgg tgctggcgcg gcagatcacc
      721 cgccccttga gccggctggt ggcgatgacg cgtgatgtgg ccgaggggcg ctactcgggc
      781 gaagtgaagg tgacctcgcg ggacgagatc ggcgagctgg ccgacgcctt ccgggggatg
      841 ctggccgaac tccgggaaaa gcagcggctg gtggagttcc tcggtgggac cggggccaac
      901 acccttcagg tacccgggcc gattggcggg gcgccgacag ccgccagtcc agtgccggtg
      961 accggtttcc tccgccccgg cgccatgctg gccaaccgct atgagatccg gcagcagctg
     1021 ggctccggt
//
LOCUS       DATIFF010000562         1841 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_533139, whole genome shotgun sequence.
ACCESSION   DATIFF010000562 DATIFF010000000
VERSION     DATIFF010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1841
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_533139"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1003)
                     /locus_tag="VLD58_08360"
     CDS             complement(<1..1003)
                     /locus_tag="VLD58_08360"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSB54355.1"
                     /translation="MTTTTTTELTPWIANAHLPLDGRVTDPIRIPFTGEQGALAARGT
                     EADLEAAIAAAAAGFHVMRALPRHARRDLLARVADALVRERQSLATELAVSCGKPIGQ
                     ALGEVDRAVMTFSFAADEARRFGGEMVPLDVDPRTVGYTGLVHRFPVGPISVFTPFNF
                     PLNLLAHKVAPAIAVGSALVVKPPPQCPQLAFRLGRILAECGLPAGAYNVLHLPIHLA
                     QHLASDPRFAMLTFTGSPSVGWHLKGLAGKKKVCLELGGNAAAVVHEDVVDQDWVAQR
                     LATGAFAYAGQVCIKVQRILVHQPIYQRFIQKLVDASAALPVGDPLDPKTVVGPMIDA
                     "
     gene            1146..>1841
                     /locus_tag="VLD58_08365"
     CDS             1146..>1841
                     /locus_tag="VLD58_08365"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB54356.1"
                     /translation="MASLSLRGLSKTYDRRAAALRELSLEVEDGELVALLGPSGCGKS
                     TILRLIAGLETPTTGTVWIGGREVTRLPPADRNVAMVFQSYALYPHFTVRGNLEFPLR
                     MRGVNPADRITRVERVAAQLGLGDLLHRLPAQLSGGQRQRVALGRALVRNPDVFLLDE
                     PLSNLDAALRAQLRAELLALHRSLGATMLYVTHDQVEALTLGHRLVLLKDGAIQQVGT
                     PREVYDRPATTFVA"
BASE COUNT          274 a          655 c          629 g          283 t
ORIGIN      
        1 cggcgtcgat catcgggccc accacggtct tcgggtccag cggatcaccc accggcagag
       61 cggcgctcgc gtccaccagc ttctgtatga agcgctggta gatcggctgg tgcaccagga
      121 tgcgctgcac cttgatgcag acctgcccgg cgtaggcgaa ggcgccggtg gcgagccgct
      181 gcgccaccca gtcctggtcc accacgtcct catgtaccac cgcggcggcg ttcccgccca
      241 gctccaggca gaccttcttc ttccccgcga ggcccttcag gtgccaaccc accgaggggc
      301 tgccggtgaa ggtcagcatc gcgaaccggg ggtccgaggc gaggtgctgg gcgaggtgaa
      361 tcggcaggtg cagcacgttg taggctcccg cgggcagccc gcactccgca aggatgcggc
      421 cgagtcggaa ggccagctga gggcactggg gcggcggctt caccaccagg gcgctcccga
      481 cggcgatggc gggcgccact ttgtgggcca ggaggttgag cggaaagttg aacggcgtga
      541 acacgctgat gggacccacc ggaaagcgat gcaccagacc ggtatatccc acggtgcggg
      601 gatcaacgtc gagcgggacc atctcgccgc cgaaccgcct ggcttcgtcg gcggcaaagg
      661 agaaagtcat caccgcccgg tccacttctc ccagcgcctg tccgatcggc ttgccgcagc
      721 tcacggcgag ctcggtggcg agcgactgcc gctcccgaac cagcgcatcc gcgacgcggg
      781 ccagaagatc acgccgcgca tgccggggca gggcgcgcat cacgtggaac ccggctgcgg
      841 ccgcggcaat cgcggcttcg aggtcggcct cggtgccccg ggccgcgagg gcgccctgtt
      901 cgccggtgaa ggggatccgg atcggatcgg tcacgcggcc gtcgagcggc aggtgcgcgt
      961 tggcgatcca gggtgtcagt tccgtcgttg tcgtcgtcgt cattcgagct tcacctcggc
     1021 tccgagtgcc cagttcccag ttcgggttcc tcgctccacg tgtctcgcgg aactgggaac
     1081 tcggagcttg gaacgtatgc cgcaatcttg cgcgacgcca aagcggaggc aacttacgtc
     1141 cagccatggc ctccctctca ctccgcgggc tctccaagac ctatgatcgc cgcgccgccg
     1201 ccctccgcga gctctcactc gaggtggagg acggcgagct ggtggcgctg ctcggcccct
     1261 ccggctgcgg caagagcacc atcctgcgcc tcattgcggg gctcgagact cccaccaccg
     1321 gcacggtgtg gatcggcggg cgcgaagtca cccggctccc gccggccgac cgcaacgtcg
     1381 ccatggtgtt ccagagctac gcactgtatc cccacttcac cgtgcgcggg aacctcgagt
     1441 tcccgctccg catgcgcggt gtcaatccgg cggaccggat cacccgggtc gaacgggtgg
     1501 ccgcgcagct cggcctcggg gatctgctcc accggctccc cgcgcagctc tccggcggac
     1561 agcgccagcg ggtggctctg gggcgcgcgc tggtgcggaa cccggacgtc ttcctgctgg
     1621 acgagccgct gtccaacctg gacgccgcgc tccgcgccca gctccgcgcc gagctgctgg
     1681 cgctgcaccg ctcgctcggc gcgaccatgc tctacgtgac ccacgatcag gtggaggcgc
     1741 tgacgctggg ccatcggctg gtactgctca aggacggcgc gattcagcag gtcgggaccc
     1801 cccgggaggt gtacgatcgc ccggcgacca cgttcgtggc g
//
LOCUS       DATIFF010000563         1770 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1456528, whole genome shotgun sequence.
ACCESSION   DATIFF010000563 DATIFF010000000
VERSION     DATIFF010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1456528"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1422)
                     /locus_tag="VLD58_08370"
     CDS             complement(<1..1422)
                     /locus_tag="VLD58_08370"
                     /inference="COORDINATES: protein motif:HMM:NF036484.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54357.1"
                     /translation="MAQSVLRIVNARQNNLKGVTVDLPRRALIVVTGPSGSGKSSLAF
                     DTLYAEGQRRYIESLSTYAKQFLERMPKPLVDRLEGLAPSVAIEQRNPTVSSRSTVGT
                     ATELYDYLRLLWARVGRQFCRVCGAPVRRDTPQSAAGDVLARASGRLQVTFPLPATAR
                     LSHAAIVENLGALGFVRVLADGRPFHLEELAPDLDLARATELLVVVDRLALDPPPAPA
                     PIARLTEALATAFAEGEGVAVVLADSLAEGPATGEPARDSPSRAQRGFRFTERPACSA
                     CDTPAVPVTPALFSFNNPRGACGGCNGFGAVLEYVESLIIPDASRSLADGAIDPWTKP
                     RYETRRRLLQSTARTLGIDPNKPWAELRSKDRRELLHGRHGRYVGIFPFLKGLEEKRY
                     KQYIRVFLRQYQLARPCPECHGARLNEPALAVRVNGETIAAIAGRPVDQLHQWLQDLP
                     LGEFDRAVAQLILDQLHQRVGFLR"
BASE COUNT          267 a          568 c          655 g          280 t
ORIGIN      
        1 gcgcaggaag ccgaccctct ggtgcagctg gtccaggatg agctgggcca ccgcgcggtc
       61 gaactctccg agcgggaggt cctggagcca ctgatgcaac tggtccaccg ggcggcctgc
      121 gatcgcggca atggtctcgc cattcacccg gacggccagg gccggttcat tgagccgggc
      181 gccatggcat tccgggcagg gccgggccag ttggtactgc cgcaggaaga cccggatgta
      241 ctgcttgtac cgcttctcct cgaggccctt gagaaagggg aagatgccga cgtaacgacc
      301 gtgacggccg tgcagcagct cgcgcctgtc cttcgaccgc agctccgccc agggcttatt
      361 gggatcgatc cccagggtgc gggcggtgct ctggagcagg cggcgccggg tctcgtagcg
      421 gggtttggtc cacgggtcga tggcgccatc ggccaggctg cgcgaggcgt cgggaatgat
      481 cagggattcg acgtactcca ggacggcacc gaacccattg cagccgccac aggcgccgcg
      541 cgggttattg aaggaaaaga gcgccggcgt gaccggcacg gccggcgtgt cgcaggcgct
      601 gcaggcgggg cgctcggtga agcggaaccc tcgctgcgcc ctcgagggcg agtccctcgc
      661 gggctcaccg gtcgctgggc cctcggcgag cgagtcggcg agcaccaccg ctactccttc
      721 gccttccgcg aaggcagtgg cgagcgcctc ggtgaggcgg gcaatgggcg ccggcgcggg
      781 tggcgggtcc aaggcaaggc gatccaccac cacgagcaat tcggtggccc gggcgaggtc
      841 gaggtccggg gcgagctcct cgaggtggaa cgggcgaccg tcggcgagca cccgtacgaa
      901 gcccagcgcg cccaggttct ccacgatggc ggcgtggctc aggcgcgcgg ttgcgggcag
      961 gggaaaggtc acctgcagcc ggccgctggc gcgggccagc acgtcgcccg cggcggactg
     1021 gggcgtgtca cgccggaccg gcgcgccgca gacccggcag aactgccggc ctacgcgggc
     1081 ccagaggagg cgaaggtagt cgtacagttc ggtggcggtg ccgacggtag agcggctcga
     1141 gacggtggga ttgcgctgct cgatggcgac cgagggtgcc agtccttcga gccggtccac
     1201 cagcggcttg ggcatccgct cgaggaactg cttggcgtag gtggaaagcg actcgatgta
     1261 gcggcgctgt ccctcggcgt agagggtgtc gaaggccaac gagctcttgc ccgagcccga
     1321 gggcccggtc acgacgatga gcgcccggcg gggcagatcc accgtgacac ccttcaggtt
     1381 gttctgcctg gcgttgacga tgcggaggac ggattgcgcc atgatgcagg aagatagatg
     1441 ggttgggaag gacagttccg cgtacccgat tcccggttcc cagttctggt ctcctgtgtg
     1501 ctgcggttgg atcgggtttc gacccggccg gccgacacca cgtatcgtcc gggactcgga
     1561 ctggaactgg gaactgaaac cggcacgtga acatgcggaa ctctctgtcc cggcccccga
     1621 cgcggggtta gattcccgcc gccatggctt ccgtgctcgc cccgaggctg ttgctccgcg
     1681 gcttcctgat cttcgtcggc atctcggtcc tcggttacgc cggggtcctg ctgtacggcc
     1741 acaacctgcc cgccttcctg cgggcgctgg
//
LOCUS       DATIFF010000564         1998 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1456554, whole genome shotgun sequence.
ACCESSION   DATIFF010000564 DATIFF010000000
VERSION     DATIFF010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1998)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1998)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1998
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1456554"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            263..1285
                     /locus_tag="VLD58_08375"
     CDS             263..1285
                     /locus_tag="VLD58_08375"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSB54358.1"
                     /translation="MSETVTPVRWGVLGAAGIALRSVIPAMQRSPWSPVVAIASRDPG
                     KARAAAEAHGIPRHYGAYAELLADPAVDAVYIPLPNHLHVPWSIRAAEAGKHVLCEKP
                     IALSAAEARELIAVRARTGVLVGEAFMVRCHPRWHAARELARSGRIGDLRLITGHFSY
                     FRRDRGDIRTHREWGGGALLDIGSYPVTLSRWIFGAEPVAVNALVERDPEFGIDRLTS
                     AVLRFPAGVATFTCGGQLVLHQHLHLLGTRGRIEVAIPFNMPADRPSRIVVDDGRDLV
                     GGGVETIEFPPANPYLLQGERFSRAIRGHDTVPVALEDSVANMAVLDALFRSGESGSW
                     ENPARF"
     gene            complement(1282..>1998)
                     /locus_tag="VLD58_08380"
     CDS             complement(1282..>1998)
                     /locus_tag="VLD58_08380"
                     /inference="COORDINATES: protein motif:HMM:NF020133.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54359.1"
                     /translation="FFGIDSGVRHAVTGADYGTVRTAAFMGYRMIAAAAGLKVSSEEA
                     PLRVEDPRWGGYLANLRPGEFADSYEGALPVEMEGAEFLARFGGITDPVTRVEPGHRY
                     PIRQATAHPIHEQARVTRFAELLGIPGLSDGTAVELGRLMYASHRSYGSCGLGHPGTD
                     RLVELVAELGTGRGLFGAKITGGGSGGTVAVLARDGARAEIEALAQRYREETGQGGEV
                     FADSGPGAAETGVLELALRR"
BASE COUNT          285 a          719 c          666 g          328 t
ORIGIN      
        1 tcccttggcg atcccgccga tggcaggatt gcacgacatc tggccgatcg tctcgagcga
       61 ctgggtcagg agcagggtcc gggcgcccat tctcgccgcc atcgcgcacg cctcggcccc
      121 ggcgtgcccg ccgccgatca ccaggacgtc gaattcgtgc tccatggagg aaagctacct
      181 cggatcgccc cgcgccggtg gacgcgctac tatcctgccg ctggcaacgg aggcgtggaa
      241 ttcctccatc ggagcgcctg gcatgagtga gacggtgact cccgttcgct ggggagtgct
      301 tggtgccgcg ggcatcgccc tgcgctcggt gatcccggcc atgcagcgga gtccctggtc
      361 gccggtcgtc gccatcgcct cgcgggaccc gggaaaggcg cgcgccgccg ccgaggcgca
      421 cgggatcccc cgccactatg gagcgtatgc cgagctcctg gcggatcccg ccgtggatgc
      481 ggtgtacatc cccctgccga atcacctgca tgttccctgg tccatccgcg ccgccgaggc
      541 ggggaaacac gtcctctgcg agaaaccgat cgcgttgagt gccgccgaag cacgggaact
      601 gatcgcggtc cgggcgcgga ccggtgtgct ggtaggggag gcgttcatgg tgcgctgcca
      661 tccacgctgg cacgcggcga gggaattggc ccgctccggt cggatcggcg acctccggct
      721 catcacgggc cacttcagct atttccggcg tgaccggggc gacatccgca ctcaccggga
      781 gtgggggggc ggtgcccttc tcgacatcgg ctcctatccc gtgaccctct cacgctggat
      841 ctttggcgcc gagcccgttg cggtgaacgc cctggtcgag cgggaccccg agttcggcat
      901 cgatcgcctg acgagcgccg tgcttcgctt cccggcggga gtggccacct tcacctgtgg
      961 cggccagctc gttctccatc agcacctgca ccttcttggt accaggggac ggatcgaggt
     1021 cgcgatcccc ttcaacatgc cggcggaccg cccctcccgg atcgtcgtcg acgacggccg
     1081 cgacctcgtg gggggtgggg tggagacgat cgagtttcca ccggcgaatc catatcttct
     1141 gcagggagag cggttctccc gggccattcg cgggcatgac acggtgccgg tggcattgga
     1201 ggattccgtg gccaacatgg ccgtgctcga tgccctcttc cgatccggcg aatcgggaag
     1261 ctgggagaac cccgcgcgtt tctagcggcg gagcgcgagc tccagcaccc ccgtctcggc
     1321 cgcgcccgga cccgaatccg cgaacacctc accgccctgg ccggtctctt cacggtagcg
     1381 ctgcgcaagc gcctcgatct ctgcccttgc cccgtctcgc gcgagcaccg cgacggtccc
     1441 cccgctgccg ccaccggtga tcttcgctcc gaagagccca cgcccggttc cgagctccgc
     1501 cacgagttcg acgaggcgat cggtgcccgg gtggccgagg ccgcagctcc cgtagctgcg
     1561 gtgggaggcg tacatcagcc ggcccagctc cacggcggtg ccatcgctca ggcccgggat
     1621 gcccaggagt tcggcgaatc tcgtcacccg ggcctgctcg tgaatcgggt gcgccgtggc
     1681 ctgacggatc ggatagcggt gccccggttc gacgcgggtg acggggtcgg tgatcccacc
     1741 gaagcgggcg aggaactccg ccccctccat ctcgaccggc agcgcgcctt cgtaggagtc
     1801 ggcgaattcc ccggggcgca ggttggcgag atatcccccc cagcgcggat cctcgacccg
     1861 cagcggcgcc tcctccgaag agaccttgag gcccgccgcc gccgcgatca tgcggtagcc
     1921 catgaaagcc gccgtgcgga ccgttccata gtccgctccg gtcaccgcgt gacgcactcc
     1981 ggagtcaatc ccgaagaa
//
LOCUS       DATIFF010000565         3860 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1610297, whole genome shotgun sequence.
ACCESSION   DATIFF010000565 DATIFF010000000
VERSION     DATIFF010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3860
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1610297"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..2410
                     /locus_tag="VLD58_08385"
     CDS             134..2410
                     /locus_tag="VLD58_08385"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSB54360.1"
                     /translation="MRQTEHATPLRVVGTRPIRPDGVDKVTGRAAFGADISLPGMLVG
                     KVKRSPHAHARILSIRADTARELPGVKAVITAADLPEISSEEAAAGEADMNLRDLSCN
                     CMARGKVQYQGHAVAAVAATSGAVADAALELIEVEYEPLPHVIDVEAAMAPDAPLLHD
                     DLFTRGVEPVPRHPSNIARQVQFSLGDVAAGFQAAEVILERRYTTKPVHQAYIEPHAC
                     VAVAGADGQCQIWCSSQGQFMVRAFCAKLLGMDIASIRVTPAEIGGGFGGKTLVYLEP
                     LALALARQAGRPVKMVMTREEVFRATGPTSGAVVEVKLGATRDGKITAAQAVLKYQAG
                     AFPGSPVQPGCMAAFAMYDLQHVSVTGYDVVSNRPKVAAYRAPGAPIASFAVESCLDE
                     LAHTLGMDPIALRQRNAARDGTRAAYGPTLRDIGYVETLVAAERHPHYAAALGPNQGR
                     GVASGFWFNFGGESTAAVHINEDGTAVVVSGNPDIGGSRASLAMMAAEVLGIPVDRVR
                     PIVADTSSIGYSFLTGGSRVTFATGMAVVQAAEKVVDELRRRAAMIWDIGADAVEWQD
                     GRAVARGARAGQVEPLPLAAIARKAGRTGGPISAEASINAQGAGPGFATHICDVEVDP
                     ETGSVKILRYTAVQDVGRAIHPSYVEGQIQGGVAQGIGWALNEEYIYDGNGQLENPGF
                     LDYRVPVASDLPMIDAVLVEVPNPRHPFGARGVGEVPIVPPMAAVANAIYAAVGVRLT
                     DLPMSPPRLLAAIDRARS"
     gene            2415..2663
                     /locus_tag="VLD58_08390"
     CDS             2415..2663
                     /locus_tag="VLD58_08390"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HSB54361.1"
                     /translation="MARVLLTGSIGRQLTGGQTRLEVEADTVRRLILELDRRFPGLGW
                     QVEQTMAIAIDGEIFQDAYSAALRPDSEVCLIPKLAGG"
     gene            2849..3568
                     /gene="modA"
                     /locus_tag="VLD58_08395"
     CDS             2849..3568
                     /gene="modA"
                     /locus_tag="VLD58_08395"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0030973 - molybdate ion binding [Evidence
                     IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HSB54362.1"
                     /translation="MARAQELLLSVAVSLKDATEELGREFQRTRPGVTLRYNFGASGD
                     LQKQIEAGAPVDLFISAGQKQIDDLGKQGVLRAESRRIFARNVLTLIVPGDSRLDLRG
                     PADLLRPEVQRVVIGNPKTVPAGQYAEESLRSLGLWEALRPKLIFAENVRQALEYVAR
                     GEVDAGFVYSTDAATRAGRIKEAGRLPQESYAPVTYPGAVIAGSRHPALAQAFLDLLL
                     SPAGQQVLARWGFQPPLGSSR"
     gene            3565..>3860
                     /locus_tag="VLD58_08400"
     CDS             3565..>3860
                     /locus_tag="VLD58_08400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HSB54363.1"
                     /translation="MSPEILSALGLSIRVACLATVLDAALGIPLAYLLARKRFPGRTL
                     VDLLVTLPLVLPPTVTGYYLIVLLGRRGWLGGPLYALTGWSVTFTWYAAVIAATV"
BASE COUNT          579 a         1326 c         1355 g          600 t
ORIGIN      
        1 cggcacccga acccgacgga gaccgaggca cgctactggc tggcgggcaa tctctgccgc
       61 tgcaccgggt acgacaaggt catccgggcc gtgctggacg cggccgccga attgcgaggg
      121 gagtgatcga gccatgaggc agaccgaaca tgcgaccccg ctcagggtcg tcggcacgcg
      181 ccccatccgt cccgacggcg tcgacaaggt caccggacgc gccgcgttcg gggccgatat
      241 ctccctgccg ggcatgctgg tcggcaaggt caagcgcagc cctcatgccc atgcgcgaat
      301 cctgtccatc cgcgccgaca cagcccgaga gttacccggc gtgaaggccg tgatcaccgc
      361 cgccgacctg ccggagatct cctccgagga ggcggccgcc ggcgaagccg acatgaacct
      421 tcgcgacctg tcgtgcaact gcatggcccg cggcaaggtg cagtaccagg ggcacgcggt
      481 ggccgcagtg gccgccacct cgggggccgt ggcggatgcg gcgctcgaac tgatcgaggt
      541 cgagtacgag ccgctcccgc acgtcatcga cgtcgaggcg gcgatggccc cggatgcccc
      601 gctgctacac gacgacctgt tcacccgggg ggtcgagccg gtgccacgcc acccgtccaa
      661 catcgccagg caggtccagt tttcgctggg cgacgtggcg gccggattcc aggccgcaga
      721 ggtcatcctg gagcggcgct acacgacgaa gcccgtgcat caggcctata tcgagccgca
      781 tgcctgtgtc gccgtcgccg gtgcggacgg ccaatgtcag atctggtgca gcagtcaagg
      841 ccagttcatg gtccgcgcct tctgcgccaa gctcctgggc atggatatcg ccagcatccg
      901 cgtcaccccg gccgagatcg gcggaggatt cggcgggaag accctcgtgt atctcgagcc
      961 gctggccctg gccctggcca ggcaagccgg ccggccggtc aagatggtga tgacccgcga
     1021 ggaggtgttc cgggcgaccg gccccacctc gggtgccgtc gtcgaggtga agctgggcgc
     1081 cacccgggat ggcaagatca ccgcggcgca ggcggtgctc aagtatcagg ccggcgcgtt
     1141 tcccggctcg ccggtgcagc cgggctgcat ggcggccttc gccatgtacg acctgcagca
     1201 tgtcagcgtc accgggtacg acgtcgtgtc caatcgaccc aaggtggccg cctatcgtgc
     1261 gcccggcgcg ccgatcgcct ctttcgcggt ggagagctgt ctggacgagc tcgcgcacac
     1321 gctgggcatg gacccgatcg cgctgcgcca gaggaacgcg gcccgggatg gcacgcgggc
     1381 cgcctatggc ccgaccctcc gcgacatcgg ctacgtcgag accctcgtgg ctgccgagcg
     1441 gcacccacac tatgccgccg ccctgggtcc gaatcagggg cgcggcgtgg cctccggctt
     1501 ctggttcaat ttcggcggcg agtccacggc cgcggtccac atcaacgagg acggcaccgc
     1561 cgtcgtggtc tcgggcaatc cggacatcgg tggctcgcgc gcctctctcg ccatgatggc
     1621 ggcggaggtc ctgggcattc ccgtcgaccg ggttcgaccg atcgtcgccg acaccagctc
     1681 catcggctac agcttcctca ccggtggcag ccgcgtcacc ttcgcgacgg gcatggcggt
     1741 ggtgcaggcg gccgagaaag tcgtggacga gctgaggcgt cgggcggcga tgatctggga
     1801 catcggcgcc gacgcggtgg aatggcagga cgggagggcg gtcgcccgtg gcgcccgggc
     1861 gggacaggtc gaacccctcc cgctcgccgc catcgcccgc aaggccggac ggacgggcgg
     1921 tccgatcagc gccgaggcat cgatcaacgc ccagggcgcg gggccgggct tcgcgacgca
     1981 tatctgcgat gtggaggtcg atccggaaac ggggtccgtc aagatcctgc gctacactgc
     2041 cgtccaggac gtcgggcgcg cgatccatcc gagttatgtg gaggggcaga tccagggtgg
     2101 cgtcgcccag ggtatcggct gggcgttgaa cgaggaatac atctacgatg ggaacgggca
     2161 gctcgagaat ccgggcttcc tcgactatcg cgtcccggtc gcctcggatc tgccgatgat
     2221 cgacgcggtg ctggtcgagg tgccgaaccc gcgacatccc tttggggcgc gtggcgtggg
     2281 cgaggtgccc atcgtgccgc cgatggctgc cgtcgccaac gccatttacg ctgccgtggg
     2341 cgtccgcttg acggacctgc cgatgtcccc gcccaggctc ttggcggcga tcgatcgtgc
     2401 gcggagctag ccgcatggcc cgggtcctcc tcaccggttc gattggtcgt caattgacgg
     2461 gcgggcagac ccggctcgag gtggaggccg acacggtccg ccgcctcatc ctggagctgg
     2521 accggcgctt tcccggcctc ggctggcagg tcgagcagac catggcgatc gccatcgacg
     2581 gcgagatctt ccaggacgcc tattccgctg ccctccgtcc ggacagcgag gtctgcctga
     2641 tacccaagct cgcgggcggg tgatcctcac ggacgcgacc aggttcgagt cgcaaacagg
     2701 cgccgcgatg caacagaaga cacggacgat cagtggaagc gagccccccg gcgcccgtcg
     2761 tcatgggagt cagggactga ggccgcggtt tggagcccgg cccgtcgccc tgaccctggg
     2821 gctgttggtc gtcatgggtg ccgcgtccat ggcacgtgcg caggagctgc tcctgtcagt
     2881 ggctgtcagc ctgaaggacg ccacggaaga gctggggcgc gagttccagc ggacccgccc
     2941 cggcgtcacc ctgcggtaca acttcggggc ctcgggggac ctgcagaagc agatcgaggc
     3001 cggcgcgccg gtggatctgt tcatctcggc agggcaaaag cagatcgacg acctgggaaa
     3061 gcaaggggtc ctccgcgccg agagccggcg gatctttgcc cgcaacgtgc tcaccctcat
     3121 cgtgcccggc gactcccggc tggatctccg cgggccggcg gatctcctcc ggcccgaggt
     3181 ccagcgcgtg gtgatcggga atccaaagac cgtgccggcc ggccagtatg cggaggagag
     3241 cctgcggagc ctgggcctgt gggaggctct ccgcccgaaa ctcatcttcg ccgagaacgt
     3301 ccggcaggcc ctggagtacg tggcccgggg ggaggtggac gcgggcttcg tgtactcgac
     3361 cgatgccgca acgcgggcag gccggatcaa agaggccggc cggctccccc aggagagcta
     3421 cgcgccggtg acctaccccg gcgccgtcat cgccggctcc cgccacccgg ccctcgccca
     3481 ggccttcctg gacttgctcc tcagtcctgc aggacaacag gtcctcgcgc gctgggggtt
     3541 ccagccgccg ctggggtcgt cgcggtgagt cccgagattc tcagcgccct ggggctgtcc
     3601 atccgggtgg cctgtctggc gacggtgctc gacgccgcgc tgggaatccc cctggcatac
     3661 ctgctggctc gcaagaggtt tccgggccgc acgctggtgg acctcctggt gacgttgccc
     3721 ctcgttctcc cgcccaccgt cacggggtac tatctgatcg tgctcctcgg acgacgcggg
     3781 tggctcggtg gtccactgta tgccctgacc ggctggagcg tgacgttcac ctggtatgcg
     3841 gccgtcatcg cggcgaccgt
//
LOCUS       DATIFF010000566         1204 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2073093, whole genome shotgun sequence.
ACCESSION   DATIFF010000566 DATIFF010000000
VERSION     DATIFF010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1204
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2073093"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(192..>1204)
                     /locus_tag="VLD58_08405"
     CDS             complement(192..>1204)
                     /locus_tag="VLD58_08405"
                     /inference="COORDINATES: protein motif:HMM:NF033517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HSB54364.1"
                     /translation="IEKGLPEPGLLAEVITSKYCDHLPLYRVEGIFARHGVELSRKTM
                     CGWMTEAAWLLEPIWKAMKAEVLKSLVVQTDDTPVPVLDRRLDRTRQGRLWVYLGDRD
                     HPYTVYDYTADRSRDGPERILGDYRGYLQADAYSAYDRIYSRGVVEVGCWAHARRKFY
                     DARTSDPERAHEALARIRQLYQVESAAEHLADADRLALRRERSAPLLERFGIWLEEQA
                     RRVLPKSPMGQAIGYARSNWAALNRYLEAGFLPIDNNASERALKPVAIGRRNWLFAGS
                     DGGGRTAAILYSLAATCKGLGLDPFAFLRDVLDRVCTHPARRIAELLPNRWSKPEANS
                     AG"
BASE COUNT          187 a          437 c          394 g          186 t
ORIGIN      
        1 cgccgcccct catccgggcg gccgagggac ttgaaccctc cggatcaaga cgctgcccag
       61 cacacagtat gagatgtccg tcggagcaag gcgatgcctt cgtgcggacg accccctccg
      121 accaaagcca tagcctcgcc gaccgagcgg ggccgggcaa ggcatcggac ggaatccgcc
      181 gcctgctgcg ttcagccagc cgagttcgcc tcgggcttcg accatcggtt cggcagcagc
      241 tccgcgatcc gccgcgccgg gtgagtgcag acccggtcca gcacgtcacg gaggaaagca
      301 aagggatcga gccccaggcc cttgcacgtc gccgccaggc tgtacaggat cgcggcggtc
      361 cgcccgccac cgtcgctgcc cgcgaagagc cagttccggc gtccgatggc gaccggcttc
      421 aacgcgcgtt cgctcgcatt gttgtcgatc gggaggaagc cggcctccag gtagcggttc
      481 agcgccgccc agttcgaccg cgcatacccg atcgcctggc ccatcgggct cttcggcagc
      541 acgcggcggg cttgctcctc cagccagatc ccgaaccgct ccagaagcgg ggcggaccgc
      601 tcgcgtcgca gagcaagccg gtcagcgtcg gcaaggtgct cggccgcgct ctccacctgg
      661 tagagttggc ggattcgtgc caacgcctcg tgcgcccgct ccgggtcgct ggtgcgggcg
      721 tcatagaact tgcgccgcgc gtgggcccag cagccgacct ccaccacgcc ccgggaatag
      781 atccggtcgt aggcgctgta ggcatccgcc tggaggtagc cgcggtagtc gcccaagatc
      841 cgctccggcc cgtcgcggct ccggtcggcc gtgtagtcgt agaccgtgta ggggtggtca
      901 cggtcgccca ggtagaccca aagtcgcccc tgtctggtcc gatcgaggcg gcggtccagg
      961 accggcaccg gggtgtcgtc cgtctgcacc accagagact tgagcacctc agccttcatc
     1021 gccttccaga tcggctccag gagccaggcc gcctcggtca tccagccgca catggtcttg
     1081 cgcgacagct cgaccccgtg gcgggcgaag atgccttcca cccggtacag cggcaggtgg
     1141 tcacagtatt tgctcgtgat cacctcggcc agcaggcccg gctcgggcag gcccttctcg
     1201 atcg
//
LOCUS       DATIFF010000567         1573 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1610414, whole genome shotgun sequence.
ACCESSION   DATIFF010000567 DATIFF010000000
VERSION     DATIFF010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1573
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1610414"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            308..1474
                     /locus_tag="VLD58_08410"
     CDS             308..1474
                     /locus_tag="VLD58_08410"
                     /inference="COORDINATES: protein motif:HMM:NF044870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HSB54365.1"
                     /translation="MSRARRRGLIRLAALLGSVAALLIWFFATSGGGHRGAGGLAPVD
                     AKRGTAGHVPPLLDPHDVYAADRPGMLSPVVRRFPSRVYVPNSESNTVSVINPHTYKV
                     IGQFPAGTLPQHVVPSYDLKTLWVNNDEGNTLTPINPATSKPGRPVPVTDPYNLYFTP
                     DGRFAIVVEERMQTLDFRDPQTMRSDHTLSVPCYGVNHMDFTADGRYLLASCEFGGAL
                     IKVDLARQRVVGRLTLGSGASPQDIKLSPDGRVFYVADQASDGVWLIDAKRLRKVGFI
                     PTGAGAHGLYVSRDSKYLYVSDRRAGEVSVISFATRKVVHTWHIPGGSPDMGGVSADG
                     RVLWLSGRYGAEVYAISTRNGHLLARIPVGSGPHGLCVYPQPGRYSLGHTGVFR"
BASE COUNT          248 a          578 c          509 g          238 t
ORIGIN      
        1 ccgatgagcc cgagacgacg ttcaggccga gcaccaccag gccggcgatg gacccgagca
       61 ggatggcgag ccgcaccagg ccgcggcggc gctcggggct catcctcgat gagggggatt
      121 ggcggcgcgc ggttcgcgcc ctgcgggtcg tggacacgcc acccctaatg tcagcagatc
      181 aggtgaagcc cccctaagct cacagtgagc cttttctact accgcgctta gattcgcttc
      241 atcacgggag gtgacgctgc agaggatgag ccgtgcccgg cgacgcacca gccgtgcccg
      301 gcgacccatg agccgagccc ggcgacgcgg cctgattcgc ctggcggcgc tgctgggctc
      361 agtcgcggcg ctcttgatct ggttcttcgc gaccagcggc ggcggccatc gcggcgccgg
      421 cgggctggca ccggtcgacg caaagcgagg taccgcaggg cacgtgcctc cgctgctcga
      481 cccccacgac gtctacgcgg cggaccggcc cgggatgctc tcgccggtcg ttcgccggtt
      541 cccctctcgc gtctacgtgc cgaacagcga gagcaacacc gtgagcgtga tcaaccccca
      601 cacctacaag gtgatcgggc agtttccggc gggcaccctc ccccagcacg tggtcccctc
      661 ctacgacctg aagacgctct gggtcaacaa cgacgagggg aacaccctga cgccgatcaa
      721 tccggccacc tccaagcccg gtaggcccgt tccggtcacc gacccgtaca acctctactt
      781 cactcccgac ggtcgcttcg ccatcgtcgt cgaggagcgg atgcagacgc tcgacttccg
      841 cgacccgcag acgatgcgca gcgatcacac cctgtcggtg ccctgctatg gcgtgaacca
      901 catggacttc acggcggacg ggcgatacct gctcgccagc tgcgagttcg gcggcgccct
      961 gatcaaggtc gacctggccc gccagcgggt cgtgggccgg ctgacgctgg gctcgggggc
     1021 ctcgccccag gacatcaagc tctccccgga cggacgggtc ttctacgtcg ccgatcaggc
     1081 ctcggacggc gtctggctga tcgacgcgaa gcgcctccga aaggtgggct tcatcccgac
     1141 cggcgcgggg gcgcacggcc tctacgtcag ccgcgactcg aagtacctct acgtctccga
     1201 ccgcagagcc ggcgaggtct cggtgatctc cttcgcgacc cgcaaggtgg ttcacacctg
     1261 gcacatccca gggggcagcc cggacatggg cggcgtctcc gcggacggcc gggtcctctg
     1321 gctgtcgggg aggtacggcg cagaggtcta cgcgatcagc acccgcaacg ggcacctgct
     1381 cgcgcggatc ccggtcggca gcggccccca cggtctctgc gtctacccgc agcccgggcg
     1441 gtactccctc gggcacacgg gcgtcttccg ctgacccatc cctcagatca gggagacgat
     1501 cccggtctcg atctcataga cggcgggcac cacggcgatc tgcccggcct ccacggcctg
     1561 cttcacgatc gga
//
LOCUS       DATIFF010000568        13678 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1303743, whole genome shotgun sequence.
ACCESSION   DATIFF010000568 DATIFF010000000
VERSION     DATIFF010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 13678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13678
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1303743"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..367
                     /locus_tag="VLD58_08415"
     CDS             <1..367
                     /locus_tag="VLD58_08415"
                     /inference="COORDINATES: protein motif:HMM:NF012304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RNase H family protein"
                     /protein_id="HSB54366.1"
                     /translation="MREWVPGWISRGWTRKGGTIENLELWRVLVDSAKKHDVEWTWVR
                     GHKGHPKNEYANDLAVKAATDQVTSAGAVESGFPAWLEVKRGKKMFEGYDPDAAFAAL
                     EAKLRSGEKFRLAEGESEK"
     gene            complement(458..1324)
                     /locus_tag="VLD58_08420"
     CDS             complement(458..1324)
                     /locus_tag="VLD58_08420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54367.1"
                     /translation="MRSLSLALGALVLAAPLAAQNVCKPGSGSREAELFGHFSVPLAF
                     SSAQSPWIYRPGSIQIGVEGTYIPDASDRIATPTKCRPGKGPENVNLLTAFPRPRVGF
                     ALGDGVLLEVSWTPPVTRINGVRPNLWGLALSRSVLVSRNGTMFMGRVHATLGNVRAP
                     FVCPKSATQDPANPDCFGGEESDDRYSPNIFGVELGFGWPLLGGALRPYLGTGYNIIH
                     PRFQVDRIAAGGAVDNQKVEVNLSRWALFGGFTWAPSSSFLLSTEAYTAPSDAITGRV
                     KATLVVGGRKRR"
     gene            1376..2089
                     /locus_tag="VLD58_08425"
     CDS             1376..2089
                     /locus_tag="VLD58_08425"
                     /inference="COORDINATES: protein motif:HMM:NF024183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HSB54368.1"
                     /translation="MTDLERLFRRLVDNLIAIDPARLHRPITLGDLVGSVIPYRTTRR
                     ALGIDSAEDYDMLVLRLCAGEGGYVRLLTDEAMMAFRDQLASPNPDLGVLAEYRESEL
                     VLGGEPLAHALGPGPEEAYAPAEEEYLEPLPPPPPAIALSVEPRRVPFSAEPVPPVVP
                     PPPRMTAEPEPLRRPVLRLDSSPRCSYCGGPLPSGRTVNFCPHCGQNQSFTRCPECQA
                     DLELGWKHCINCGHSVGEG"
     gene            2224..2631
                     /locus_tag="VLD58_08430"
     CDS             2224..2631
                     /locus_tag="VLD58_08430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54369.1"
                     /translation="MLGSLGTLMLSLTTVLSAPNHRDTTPRDTLVLAHEFTAPNEFAR
                     ATLEAGQVYRVELTDASRLQVRTLRSGQQLPVVARTEPLGRASRTTVFELQPSVTTTY
                     EFRVAGLSHGAAPIRVYWDAESSARRVKVKKKV"
     gene            2864..4072
                     /locus_tag="VLD58_08435"
     CDS             2864..4072
                     /locus_tag="VLD58_08435"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HSB54370.1"
                     /translation="MSTQGHPTSVVIVAGVRTGFGTFGGTLKDLSATELGAIAARGAL
                     ARAGVAPSDIDHVIVGNALQTSADAIYLARHVGLKAGCRIETPAVTVNRLCGSGFEAV
                     VQGAQQLLLGESSIVLVGGTESMSQAPHVVRGARWGLRLGPAAPLEDSLWEALRDTEC
                     GLSMAETAENLATQYQISRDAVDAYALQTQQRARDAWASGAFADEVVPVPIMNRKTKQ
                     AEPWGADEHMRPDTTIEGLARLAPYFKKDGVVTAGNASGICDGAAALVLTTDKVAAQR
                     GLKPLARLVSWGIAGVEPRIMGIGPAPASRKALAKAGLSLGQMDLVEVNEAFGAQYLA
                     VEKELGLDRARTNVDGGAIAIGHPLGASGARLTLHLMHALRRRGAHYGLASACIGGGQ
                     GETVILEALG"
     gene            4072..4914
                     /locus_tag="VLD58_08440"
     CDS             4072..4914
                     /locus_tag="VLD58_08440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54371.1"
                     /translation="MPDNLPARRIDRGAIERIIQRATELQTGERDIADGLTPDEVVAL
                     GKEVGIPERYLQQAMLEERSRTGPPPPVGILDKTIGPGTIRGERVVRGAQDEVEQRLV
                     RYFDEHELLTVQRQQPGRISWEPLRGVQGALRRSSAVFQGNRPFMLAKASLVSVTVVP
                     LEPGFSHVALAAELRASRGAILGGASAIGGISLVSAAILYVMSPFILLAAAPLPLGAA
                     ASWAILRQYRGLADRTQLGLERALDHLERGEPKPTHALPGRSGGVLGAILDEVRKAMQ
                     PPRP"
     gene            4980..5864
                     /locus_tag="VLD58_08445"
     CDS             4980..5864
                     /locus_tag="VLD58_08445"
                     /inference="COORDINATES: protein motif:HMM:NF005875.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HSB54372.1"
                     /translation="MPIQSLGVLGCGLMGSGIAQVAAQAGCTVRVRDTDQGQLAKGRA
                     SIEKSTAKLVEKAKLSASEREAALGRISFVTDLAALADSDLIVEAITENLELKNQLWS
                     ELDRLCPAKTILTSNTSSLTIAAMAAATTRPDRFAGLHFFNPVPLMALVEVVRTVGTS
                     SETVDRLFEFVRRLGKEPVAARDSSGFIVNLLLVPYILDGIRALERGVASIADLDTAM
                     RLGASHPMGPLTLADFVGLDTLARIGDIMFEEYRETRYAPPPLLRRMVIAGLYGRKNG
                     RGFYDYSKEPPVPMELGL"
     gene            5861..6352
                     /locus_tag="VLD58_08450"
     CDS             5861..6352
                     /locus_tag="VLD58_08450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54373.1"
                     /translation="MKPLTLVTLGTLLLAGCHAKTTRPYFPPVTGAPTTEIELDVKEA
                     TQALADVLKGDSLPVTKVTPRDGMIETAWFEAGSKRATHARRLGDKVVQVRAWIDPSR
                     PGHSRIILETIFRPLADPSLSERELDRQVPPDHPVGKRMTEVLTELARLYSSEPEPEP
                     AAK"
     gene            6396..6944
                     /locus_tag="VLD58_08455"
     CDS             6396..6944
                     /locus_tag="VLD58_08455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54374.1"
                     /translation="MRSPAVKRLLLAAALAAFPLPALAQQHVEVASVAPRAEDVGSLD
                     GIIRAFYDVVSGPAGEARQWSRDRTLYIPEVRFVSMDVGKDGKVHANVMTHQQFVDRA
                     NGGMVKQGFFETEIHRVTRSFGNVTHVFSTYEMRQKPEAPVFGRGVNSIQLFNDGTRW
                     WILSVAWDDEREGNAIPREMLP"
     gene            complement(7015..7809)
                     /locus_tag="VLD58_08460"
     CDS             complement(7015..7809)
                     /locus_tag="VLD58_08460"
                     /inference="COORDINATES: protein motif:HMM:NF014078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF116 domain-containing protein"
                     /protein_id="HSB54375.1"
                     /translation="MSDIQRAQLIHIDVDRRLGHEWDEWDGRPLPNGGNYDSPPALFF
                     GWSAAAIAAFFGVIALALYLLAPRLALLAPSVPQVAWIVLGAAAGIAWLWWGFLVLSY
                     VLRRPLLPERLAERGPFLRLMRLTSRVAERFGQRDWVENAAVKVYDVLALERGRKVNK
                     GELLLLIPRCLSRAALDGVLSIAGRYDVPVFVATRGQLARRVIRERRPRAVVAVACER
                     DMVSGLHDVAGKIPVLGLTMTLPAGPCKDAGLDLVQLEEWVKAYVS"
     gene            7871..9514
                     /locus_tag="VLD58_08465"
     CDS             7871..9514
                     /locus_tag="VLD58_08465"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HSB54376.1"
                     /translation="MTRPVGDHPLVQTEPRIRAAYAESAGIYRIVPAGVAIPSSLADL
                     RSLVAWAKRAGASLTARGAGSGIPGNSVGSGVVVDLRERMPIRLEVDPARGTAITSAN
                     VTQAELTRAALPHGLRLPPDPSSSGWATLGGMVSTNASGPRTVRYGPVRRWVTALEVV
                     TSDGESGWVERGQEPERSGVPPLAALHRFSRDAAPRIRQAQGLIEARYPKTRKNTAGY
                     ALDQWLASGDELDLFVGAEGTLGLITSILWRLDPIPPARSGIRVALGSLDDLEPAVHA
                     LLPLEPSAIELLDRTFLDLLPDRGGDTTIPAAAEALLLVEFERNDQRASRGAAGDAVR
                     ALKDLALDVATALTAEEEKRLWALRHAASPILAALPPERRSLQVIEDGCVPLPRLGDY
                     IRAVREAANRQGLTVVIFGHAGDANVHVNVLPELARPDWPQRIAALFEDVSAAAIALG
                     GTVSGEHGDGRLRTPLLTRLYGGEILQLFQLTKTAFDPVGIFNPGVKLGDTASPLQQL
                     KVGDAAVPIPADIAQALREIERSGGYARSRVEIAKPGRG"
     gene            9581..10333
                     /gene="thyX"
                     /locus_tag="VLD58_08470"
     CDS             9581..10333
                     /gene="thyX"
                     /locus_tag="VLD58_08470"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: protein motif:HMM:TIGR02170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050797 - thymidylate synthase (FAD)
                     activity [Evidence IEA];
                     GO_process: GO:0009265 - 2'-deoxyribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HSB54377.1"
                     /translation="MEILRTPRLTLIARPQFVEPAHLPVQWKGAASDGEKLAEFAGRI
                     CYMSQQNPAGRTTAEYLTNILKQGHGSVFEHAVYVVLIEGISRSCSHELVRHRAGFGY
                     SQLSQRYVDESQAAFVMPPAIQGDARLEAEWTAQVESAQAAYVQAVDRLMEKYEWVAD
                     KVHRRKMAREAARSVLPNATEVKIVVSANIRAWRTMLELRLGEGAELEIRRMAVATLR
                     LLQGEAPAFFADFEIYQTNEGSEAGRVGYHKV"
     gene            10697..11803
                     /locus_tag="VLD58_08475"
     CDS             10697..11803
                     /locus_tag="VLD58_08475"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54378.1"
                     /translation="MAVRIGLAYNLKPAAPATPAGASFDSPADAEPSSRALRYDLEQP
                     DLYAEWDEPATIDAVERALRPLGEVIRLEAIEDFPTRLAAARPDFVFNIAEGLYGRNR
                     EGHIPAICEFLGIPYSASDPLTLSLALHKGRAKEIMQLRGVPTAQFFLAETVADARNC
                     SLPFPVFAKPAFEGSGKGVSVKSLCSNKRELVKQVDYLLSTYREPVLVETYLPGAEFT
                     VGILGNGKDARCLPIVGMRFDELPSGAPPIYGYEAKWIWDDPSDPLEMFECPARIPAK
                     LATAIRTAALGAYHALECRDWCRIDIRCDANSVPNVVELNPLPGILPDPRDNSCLPKA
                     ARAAGMSYDELIRTAADIAWRRISGRSLLAEAAA"
     gene            11863..12819
                     /locus_tag="VLD58_08480"
     CDS             11863..12819
                     /locus_tag="VLD58_08480"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HSB54379.1"
                     /translation="MVDSVKEVQVALKGRGHETSLVAVRRPDDFGWLSRVRRADLIFN
                     LCEGIGGNSRYEDFVVSTLELTGVPYTGCKPWAVSVAHRKHVANTLLARNGVSIPRFI
                     LAAGNKVPADLTLPVIVKPAAEDASVGIDTGSVCTTKRALKKRLAEMSEQWEEVLVQE
                     YVAGREFNVGFVGDTVLPIAELCFDNMPEGSWPILTYAAKWDVGSPEDLGSVPVCPAD
                     LPQEIQKRIVAVARQGWEELCGGEGYGRVDLRVDAAGQPYILEVNPNPDISDSAGLSR
                     MARARDWDYEELIARIVDEALSRSSSRQAAAALAVGDAATAT"
     gene            12816..13337
                     /locus_tag="VLD58_08485"
     CDS             12816..13337
                     /locus_tag="VLD58_08485"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB54380.1"
                     /translation="MTTRVEPRLRDLTSADAARILEITRLTGVFREEELGIAAEVFAD
                     GVEAAAKARAAATPPTGELPYYLLGAELDGMLVGWICWGATPCTERTWDLYWLAVDPR
                     AQGHGVGSTLVDEMERRLKGKARLISIDTSGRADYEPTRRFYQLRGYRAVAVVPNFYA
                     AGDDQVIFTKELS"
BASE COUNT         2236 a         4803 c         4479 g         2160 t
ORIGIN      
        1 catgcgcgaa tgggtgccgg gttggatcag ccgcggatgg accaggaagg gcgggacgat
       61 cgaaaacctg gagctctggc gggtgctggt cgattccgcc aagaagcatg acgtggagtg
      121 gacctgggtc cggggccaca agggacaccc gaagaacgaa tacgccaacg acctcgccgt
      181 gaaggccgcg accgatcagg tcacctcggc cggagcggtg gaatccggat tcccggcctg
      241 gctcgaggtc aaacgcggca agaagatgtt cgaggggtac gaccctgatg cagccttcgc
      301 ggcgctggaa gcgaaactgc ggtctggtga gaagttcagg ttggcggagg gggagagtga
      361 gaagtgagaa gggagaaggg agaagggaga agggggtgct tccttctccc ttctcacttg
      421 acccctgacc cccgaccctc agcccatagc ccccagccta cctccgcttc cgccccccga
      481 ctaccagcgt cgccttcacc cgtcccgtga tcgcatcact gggtgcggtg taggcttcgg
      541 tcgaaagcag gaacgagctg ctcggcgccc aggtgaatcc gccgaagagc gcccaccggc
      601 tcaggttgac ctccaccttc tgattgtcca ccgccccgcc cgccgcgatc cggtccacct
      661 ggaaacgcgg atggatgatg ttgtagccgg tgccgagata gggccgtagc gcgcccccca
      721 ggagcggcca gccgaagccg agttccacgc cgaagatatt cgggctgtag cgatcgtcgg
      781 attcttcgcc cccgaagcag tcggggttgg ccggatcctg ggtggccgac ttgggacaga
      841 cgaacggcgc ccgcacgttt ccgagggtgg cgtgaacccg gcccatgaac atggtgccgt
      901 tccgggagac cagcaccgag cgcgagagcg cgagacccca gagattgggc cgcaccccat
      961 tgatccgggt gaccggcggc gtccagctca cctcgagcag gactccgtct cccagggcga
     1021 acccgacccg cggccgagga aaggcggtga gcaggttgac gttttccggc cccttgcccg
     1081 ggcggcactt ggtcggcgtc gcgatccggt cactggcatc agggatgtag gttccttcca
     1141 ccccgatctg gatcgacccc ggccggtaga tccagggcga ctgggccgaa ctgaacgcca
     1201 gagggaccga gaagtggccg aagagctcgg cctcccgcga cccggaccct ggcttgcaga
     1261 cattctgcgc cgcgagcggg gcggcgagga ccagtgcgcc gagggcgagg gagagcgaac
     1321 gcatgaacac tccttgcttg acagtgcggg aagccggctc tactctgacc agttaatgac
     1381 cgacctcgaa cggctttttc gtaggctggt ggataaccta atcgccatcg acccggcccg
     1441 cctgcaccgg cccatcaccc tcggcgatct cgtcggctcc gtcatcccgt atcgcaccac
     1501 ccgtcgtgcg ctcgggatcg actccgccga ggactacgac atgctggtgc tgcggctctg
     1561 cgccggtgag ggcggctacg tgcgcctgct caccgacgag gcgatgatgg cctttcgcga
     1621 ccagctcgcc agtcccaacc cggacctggg tgttctcgcc gagtaccgcg agagcgagct
     1681 ggtgctcggc ggcgagccgc tggcccacgc gctgggtccc ggccccgagg aggcgtacgc
     1741 gccggccgag gaggagtacc tcgagccgct gccgccccct ccgccggcga ttgcgctgtc
     1801 ggtcgaaccg cgccgggtgc ccttcagtgc ggagccggtg ccgccggtgg ttccccctcc
     1861 cccgcgcatg accgccgagc ccgaacccct ccgccgaccg gtgcttcggc tcgattcgtc
     1921 gccccgctgc agctattgcg gcggaccgct gccgtccggg cgcacggtga atttttgtcc
     1981 ccactgcggg cagaaccaga gcttcacccg ctgccccgaa tgccaggccg acctcgagct
     2041 gggctggaag cactgcatca actgcggtca ctccgtcggc gaaggctagt tcccccaata
     2101 cctgccgttc ctgcagcata ttcccggtgc cgggctgtgt caccgggccc ggcgccggtc
     2161 gtctctccgg gtgaacgccg gggacccgag aggccatccg gcgcaaccag gaaggagcag
     2221 gacatgctgg gcagtctggg aacgctgatg ttgtcattga ccacggtgct gtcggccccg
     2281 aatcaccggg acacgacgcc gagggatacc ctggtgctgg cgcacgagtt caccgcgccg
     2341 aatgaatttg cgagggcgac gctcgaggcg gggcaggtct atcgcgtgga gctgacggat
     2401 gcgagccggc tccaggtccg cactctccgt tcgggccagc agctcccggt ggtcgcgcgc
     2461 accgagccgc tcggccgcgc gagccgcacg accgttttcg agctgcagcc gtcggtgacc
     2521 acgacctacg agttccgggt tgcgggcctg agccacgggg cggcgccgat ccgggtctac
     2581 tgggacgcgg agagctcggc gaggcgggtg aaggtgaaga agaaggtcta gaggtcgaga
     2641 ggtctagagg tcgagggtct agaggacgag gaggttggcg ctgaccccta gacctcttga
     2701 cctctcgacc cccgaccccc gacccccgac tctagacccc tcaacccctc aacccctcaa
     2761 cccctcgacc cctcgacccc tcgacccccg ctcctcgctt tcgcccttcc ccctcctcca
     2821 tatttcccgc cccgacgtcc ctttccttat atagggagta ccgatgtcga cccaggggca
     2881 tccgaccagc gtggtcatcg tcgccggtgt gcgcaccgga tttggcacct tcggaggcac
     2941 actcaaggac ctgtccgcca ccgagctcgg cgccatcgcc gcgcgcggtg cgctggcgcg
     3001 ggcgggcgtg gctccgtccg atatcgatca tgtcatcgtc ggcaacgcgc tccagaccag
     3061 cgccgacgcg atctatctcg cgcggcatgt gggcctcaag gcgggatgcc ggatcgagac
     3121 gcccgcggtc accgtcaacc gcctctgcgg ctcggggttc gaggcagtgg tccagggcgc
     3181 ccagcagctc ctgttaggcg aatcgtcgat cgtcctggtg ggcggcaccg agtcgatgag
     3241 ccaggcgccc catgtggtgc gcggggcccg ctggggcctc cggctcggcc cggccgcccc
     3301 gctcgaggat tcgctctggg aagcgctgcg cgacaccgag tgcggcctca gcatggcgga
     3361 aaccgccgag aacctggcca cgcagtatca gatttcgcgt gatgcggtgg acgcctatgc
     3421 cctccagacc cagcagcggg cccgcgacgc ctgggcctcg ggcgcctttg ccgacgaagt
     3481 agtccccgta ccgatcatga accggaagac gaagcaggcg gagccctggg gcgcggacga
     3541 gcacatgcgg cccgacacca ccatcgaggg gctggcccgg ctcgcgccct acttcaagaa
     3601 ggacggcgtg gtcaccgcgg gcaacgcctc cggcatctgt gacggcgccg cggcgctggt
     3661 gctgaccacc gacaaggtgg ctgcccaacg gggactcaag ccgctcgcgc ggctggtctc
     3721 ctggggcatc gccggagtgg agccgcgaat catgggcatc ggtccggccc cggcgtcgcg
     3781 caaggcgctg gccaaggccg gactgtcgct cgggcagatg gatctggtcg aagtcaacga
     3841 ggcgttcggc gcccagtatc tcgccgtgga gaaggaactg ggactggacc gggcccgtac
     3901 caatgtcgat ggcggtgcca tcgccatcgg gcacccgctc ggtgccagcg gcgcccgcct
     3961 gaccctgcac ctcatgcatg cgctccggcg ccggggcgct cactacgggc tcgcgagcgc
     4021 ctgcatcggc ggcgggcagg gcgagaccgt gatcctcgag gccctcgggt agtgccagac
     4081 aatcttcccg cccggcggat cgaccgcggc gcgatcgaac ggatcatcca gcgcgccacc
     4141 gagctccaga ccggcgagcg cgacatcgcc gacggcctca ctcccgatga agtggtggcg
     4201 ctggggaagg aagtcggcat ccccgagcgt taccttcagc aggcgatgct cgaagagcgg
     4261 agccgtaccg gaccaccgcc gccggtcggc atcctcgaca agaccatcgg acccggcacg
     4321 atccggggcg aacgggtggt acgaggcgcc caggacgagg tggagcagcg gctcgtccgg
     4381 tacttcgacg aacacgagct gctcacggtt cagcgacagc agccgggacg gatcagctgg
     4441 gagccgctcc gcggagtaca gggcgcgctc cgccgctcgt ccgcggtctt ccagggcaac
     4501 cggccgttca tgctcgccaa ggcgagcctg gtcagtgtca ccgtggttcc gctcgagccc
     4561 ggcttctctc acgtggcgct ggccgcggag ctccgtgcca gccggggagc aatactgggc
     4621 ggagcgagcg cgatcggcgg catctcgctg gtctcggccg cgattctcta tgtgatgagc
     4681 ccgttcatcc ttctcgccgc cgccccgctt ccccttggtg cagccgccag ctgggccatc
     4741 ctgcgtcagt accgcgggct cgccgatcgg acccagctcg gattggagcg ggcgctggac
     4801 catctcgagc ggggcgagcc caagccgacc catgcgctcc cgggacggag cggcggcgtg
     4861 ctgggcgcga tcctggatga ggtgcggaag gcaatgcagc cgccgcgacc ctaggcccta
     4921 gtcccctaga cctctagact cctagactcc tagacccctc gacctctcga ccccgaacca
     4981 tgcccatcca atcactcggc gtcctcggct gcggtctcat ggggagcggc atcgcgcagg
     5041 tggccgccca ggccggctgt accgtccggg tgcgcgacac cgatcagggc cagctcgcca
     5101 aggggcgtgc ctcgatcgag aagtcgaccg ccaagctggt ggagaaggcc aagctctccg
     5161 cctccgagcg cgaggctgcc ctcggccgga tctccttcgt caccgatctg gccgccctgg
     5221 cggattccga tctcatcgtc gaggcgatca ccgagaacct cgagctcaag aaccagctct
     5281 ggtccgagct cgaccggctc tgcccggcga agacgattct tacctccaac acctcgagtc
     5341 tcaccatcgc ggcgatggcg gcggccacca cccggcccga ccggttcgcc ggactgcact
     5401 tcttcaaccc ggtaccgctg atggcgctgg tggaggtggt gcgcacggtg gggaccagca
     5461 gcgagacggt cgaccggctc ttcgagttcg tccgtcggct cggcaaggag ccggtcgccg
     5521 cgcgcgacag ctccggcttc atcgtcaacc tgctcctggt cccctacatt ctcgacggga
     5581 tcagggcgct cgagcggggg gtcgcatcga tcgccgacct cgataccgcg atgcgcctgg
     5641 gcgcgagcca cccgatgggg ccgctcaccc tggccgattt cgtggggctc gacaccctgg
     5701 cccgtatcgg cgacatcatg ttcgaggaat accgcgagac ccgctatgcc ccgcctccgc
     5761 tcctgcggcg gatggtcatc gccgggctct acggacgcaa gaacggccgc gggttttacg
     5821 attactcgaa ggagccaccc gtgccgatgg agctggggct gtgaagccgc tcacgctggt
     5881 gacactcggc accctgctcc tcgccgggtg ccatgcgaag acgacccgcc cctatttccc
     5941 gccggtgacc ggcgcgccga ccaccgaaat cgagctcgac gtgaaggaag ccacccaggc
     6001 gctcgccgat gtgctcaagg gtgacagtct tccggtgacg aaggtgacgc cccgcgatgg
     6061 catgatcgag accgcctggt tcgaggccgg gagcaagcgg gccacccatg cgcgccgcct
     6121 gggagacaag gtcgtgcagg tgcgggcctg gatcgatccc tcccgcccgg gccacagcag
     6181 gatcattctg gagaccatct tccgcccgct ggccgacccg agcctgtcgg agcgcgagct
     6241 cgatcgccag gttccgcccg accacccggt cggcaagcgg atgaccgaag tcctcaccga
     6301 actggctcgc ctctattcca gcgaacccga gccagaaccg gcggcgaagt agcgccgtac
     6361 agtgggggca gtcccccccg aacctggagc gatggatgcg gagtcccgcc gtgaaacgcc
     6421 tgctgctcgc tgccgcactt gcggccttcc ctctccccgc gctggcccag cagcatgtcg
     6481 aggtggccag tgtggcgccg cgggccgagg acgtcggttc gctcgacggc atcatccgcg
     6541 ccttctacga cgtggtgagc ggtccggccg gcgaggcccg gcaatggagc cgcgaccgca
     6601 ccctctacat tcccgaggtc cggttcgtat cgatggatgt cgggaaggac ggcaaggtcc
     6661 acgcgaatgt gatgacccat cagcagttcg tggaccgggc caacggcggg atggtcaagc
     6721 aggggttctt cgagaccgag attcaccggg taacccggag ttttggcaac gtcacccacg
     6781 tgttcagcac ctacgagatg cggcagaagc ccgaggcccc ggtgttcggg cgaggggtga
     6841 acagcatcca gctcttcaat gatgggaccc gctggtggat cctgtcggtc gcgtgggatg
     6901 acgagcggga ggggaatgcg attccgcggg agatgctgcc gtaattgtgg ccggaggcgg
     6961 gaggcgggag gcgggagttg ttcactccgg cctccggcct cctgcctccg gcccttaact
     7021 cacatacgcc ttcacccact cctccagctg taccaggtcg agccccgcgt ccttgcaggg
     7081 gccggcgggc aatgtcatcg tgaggccaag aaccggaatc ttccccgcca catcgtggag
     7141 tccgctcacc atatcccgtt cgcaggcgac cgccacgacc gcgcggggac ggcgctcccg
     7201 gatcacccgg cgcgccagct gccccctggt agccacgaag accggcacat cgtagcggcc
     7261 ggcaatcgac agcactccgt cgagggccgc gcgcgagagg cagcggggga tgaggagcag
     7321 cagctcaccc ttgttcacct tgcggccgcg ctcgagggcc aggacgtcgt agaccttcac
     7381 cgccgcgttc tccacccagt cccgctgacc gaatcgctcc gccactcgcg aggtaagccg
     7441 catcaggcgg aggaacgggc cccgctccgc gaggcgttcg gggagcaacg gtctccggag
     7501 gacataggag agcaccagga agccccacca gagccacgcg attcccgccg ccgcgcccag
     7561 cacgatccac gcgacctgcg gcaccgacgg ggccagcaat gccagccttg gtgcgagcag
     7621 gtatagggcg agcgcgataa cgccgaagaa agccgcgatc gccgcggccg accagccgaa
     7681 gaagagcgcc ggcggactgt cgtagttgcc gccgttgggg agcggacggc cgtcccactc
     7741 gtcccactcg tggccgaggc gtcggtcgac atcgatgtga atgagttgcg cgcgctggat
     7801 atccgacatg ttcgctaagc ctttccctgc tgccatgcct tgtcaagcct gaacgactac
     7861 gtttccccgc atgacccgac cggtcggtga tcacccgctg gtacagactg agccgcgcat
     7921 tcgcgcagcg tacgcggaga gcgcggggat ctatcgaatt gtcccggcgg gcgtggcgat
     7981 tccctcttct ttggctgatc ttcggtcgct ggtggcctgg gccaagcgcg ccggcgcgag
     8041 tctcactgcc cgcggcgccg gcagcggtat tccaggtaac tcggtgggca gcggtgtggt
     8101 ggtcgacctg cgggagcgga tgcccatccg cctcgaggtc gacccggccc gcggcaccgc
     8161 gatcaccagc gccaacgtca cccaggcgga acttacccgg gcagcgctgc cgcacggtct
     8221 ccgccttcca cccgatccct cgagcagcgg ctgggccaca ctcggcggca tggtgtcgac
     8281 caatgcctcg gggccgcgca cggtccgcta cgggccggtg cgtcgctggg tcaccgcgct
     8341 ggaagtggtg acatcggacg gcgagtcggg ctgggtcgag cggggtcagg agcccgagag
     8401 gagcggcgtg cccccgctcg cggccctgca ccgcttctcc cgggacgccg caccccggat
     8461 acgccaggcc cagggcctga tcgaggcccg ctaccccaag acgcggaaga acaccgcagg
     8521 gtatgccctc gaccagtggc tcgcctccgg cgatgagctc gacctctttg tcggcgccga
     8581 aggcacgctc ggcctcatca ccagcatcct ctggcggctc gatccgatcc cgccggcccg
     8641 ctcgggaatc cgggtggcgc tgggctcgct cgacgatctc gaaccggcgg ttcatgcgct
     8701 cttgccgctc gagccctcgg ccatcgagct cctggaccgg accttcctgg atctcctccc
     8761 cgaccgcggg ggcgacacca ccatccccgc ggcggcggag gcgctgctgc tggtggagtt
     8821 cgagcggaat gaccagcgcg cctcacgggg cgcggcgggc gatgcggtgc gggccctcaa
     8881 ggatctcgcg ctggacgtgg ccaccgccct caccgccgaa gaagagaagc ggctctgggc
     8941 cctgcgccac gcggcgagcc cgattctggc cgcgctgccg ccggagcgcc gttcactcca
     9001 ggtaatcgag gacgggtgcg ttcccctgcc gaggctgggc gattacatcc gcgccgtccg
     9061 cgaggcggcg aaccgccagg gtctcacggt ggtgatcttc gggcacgccg gggatgccaa
     9121 cgtccatgtg aacgtgctcc ccgagttggc ccggcccgac tggccccagc ggatcgccgc
     9181 cctctttgaa gacgtctcgg ccgcggccat cgcgctggga ggcaccgtga gcggcgagca
     9241 tggcgacggc cggctccgca ccccgctcct cacccgtctg tacggcgggg agatcctcca
     9301 gctcttccag ctgaccaaga cagcatttga ccccgtgggt atcttcaacc ccggcgtaaa
     9361 gctgggggac acggcttccc ccctccagca gctcaaggtg ggcgacgccg ccgtccccat
     9421 tcccgccgac attgcccagg cccttcgcga gatcgagcgg agcggcgggt atgcccggag
     9481 ccgggtggag atcgccaaac caggccgcgg gtaggagcgg aggtccagga ccccacttcc
     9541 tactcctccc ttctcacttc tcactcctca cttccctgcg atggaaatcc tccgcacccc
     9601 ccggctcacc ctgatcgcac gtccccagtt cgtcgagccg gcccacctgc cggtccaatg
     9661 gaaaggcgca gcctcggacg gggagaaact ggcggagttt gcgggccgca tctgctacat
     9721 gagccagcag aatcccgcgg gacgcaccac ggcggagtac ctgaccaaca tcctgaagca
     9781 ggggcatggc tcggtcttcg agcatgcggt ctacgtggtg ctgatcgagg ggatcagccg
     9841 ttcctgcagc catgagctgg tccgtcaccg ggccggattc ggctattccc agctttccca
     9901 gcgctatgtc gacgaatcgc aggccgcctt cgtgatgccc ccggcgattc agggcgacgc
     9961 caggctcgag gccgagtgga ctgcgcaggt cgagtcggcg caggccgcgt acgtccaggc
    10021 ggtcgaccgg ctgatggaga agtacgagtg ggtggcagac aaggtccacc ggcggaaaat
    10081 ggcccgcgag gcggcccgga gcgtcctccc caatgccacc gaggtgaaga tcgtggtgag
    10141 cgcgaacatc cgcgcctggc ggacgatgct ggaactccgg ctcggtgaag gggccgaact
    10201 cgagattcgg cgcatggcgg tcgccacgct ccggcttctc cagggcgaag cacccgcgtt
    10261 cttcgccgat ttcgagatct atcagaccaa cgaaggctcc gaagcgggtc gggtcggcta
    10321 tcacaaggtc tgaagacccg cgcacagccg cttcatccgc cgaaaaaccc tctctgaacc
    10381 gcgcagagag ggttttttct tgcgaaatgc atcacgaatc ggcagaaaaa ccgcttcgat
    10441 ccatcgattc gacctccgca tcgcgtgcgt tcacgccgct ttcatcgccc gatacgcgcg
    10501 tgaacgcatg ctcgatgcac cgcgaacgcc gatcgaatcg caaaaaaagt ccgcgaagat
    10561 gccaaaaaac tattgtgcgt ttcaacggtg tttcttaact taggtctgga tcctgcacta
    10621 caccgcttgg cctgctctcg atgggcggcc ttttttgcag atcaaaccgc ggtgaccaga
    10681 ttcgcagagg acccgtttgg cagttcgtat cggacttgcc tataacctga aaccagcggc
    10741 gccggccact cctgccgggg cgagcttcga ctcccccgcc gatgcagagc cctcctcccg
    10801 ggccctccgc tacgacctcg agcaacccga tctctacgcc gaatgggatg agcccgccac
    10861 gatcgacgcc gtcgagcgtg cgctccgccc gctgggcgag gtgatccgcc tcgaggccat
    10921 cgaagacttc cccacccggc tcgccgcagc ccgtcccgac ttcgtcttca acatcgccga
    10981 ggggctctac ggccggaatc gcgagggcca catccccgcg atctgtgaat tcctgggtat
    11041 tccctactcc gcgtccgacc cgctgaccct gtccctcgcc ctccacaagg gccgggccaa
    11101 ggagatcatg cagctccgcg gcgtaccgac cgcccagttc ttcctggccg agaccgtcgc
    11161 cgacgcccgg aactgcagcc tccccttccc ggtgtttgcc aagccggcct tcgaaggctc
    11221 gggcaagggc gtgagcgtga agagtctctg cagcaacaag cgggagctgg tgaagcaggt
    11281 cgactacctg ctcagcacct accgcgagcc ggtcctggtc gagacctacc tccccggcgc
    11341 cgagttcacc gtcggcatcc tcggaaacgg gaaggatgcc cgctgcctcc ccatcgtggg
    11401 gatgcgcttc gacgagctcc cctcgggcgc gccgccgatc tacggctatg aggccaagtg
    11461 gatctgggac gacccctccg atccgctcga gatgttcgaa tgccccgccc ggatacccgc
    11521 caagctcgcc acggcgatcc ggaccgcggc gctgggcgct taccatgccc tcgaatgccg
    11581 ggactggtgc cgcatcgata tccgctgcga cgccaactcg gtgcccaatg tggtggagtt
    11641 gaaccccctt cccggcatcc tccccgatcc ccgggacaac tcctgcctgc ccaaggctgc
    11701 ccgagccgcc ggaatgagct acgatgagct catccgcacc gccgccgaca tcgcgtggcg
    11761 ccggatcagc ggccggtccc tcctcgccga ggccgctgcg tgaaggtttc cattctatat
    11821 gatggtggtt gggagacttg ggacgccaag gacgtcgcgt ccgtggtcga cagcgtcaag
    11881 gaggtccagg tcgccctcaa ggggcggggc catgagacct ccctggtggc agtccgccgt
    11941 cccgacgact tcggctggct ctcccgggtc cgccgggccg acctgatctt caatctctgc
    12001 gaaggcatcg gcggcaactc ccgctacgaa gacttcgtgg tgagtaccct cgagctcacc
    12061 ggcgttccct acaccggctg caagccctgg gcggtgtcgg tggcgcaccg gaagcacgtc
    12121 gccaataccc tgctggcccg gaacggggtc tccattcccc gcttcatcct ggcggcgggg
    12181 aacaaggtcc cggccgacct caccctcccc gtcatcgtga agcccgcggc cgaggacgcc
    12241 agcgtcggca tcgataccgg ctcggtctgc accaccaagc gcgccctcaa gaagcgcctg
    12301 gccgagatga gcgaacagtg ggaagaggtg ctggttcagg aatacgtcgc cggccgggag
    12361 ttcaacgtcg gcttcgtggg cgataccgtc ctgccgatcg ccgagctctg cttcgacaac
    12421 atgcccgagg ggagctggcc gatcctcacc tacgccgcca agtgggacgt ggggagcccc
    12481 gaggatctcg gctcggtgcc ggtctgcccg gccgacctgc cgcaggaaat ccagaagcgg
    12541 atcgtcgccg tggcccgcca gggctgggaa gaactctgcg ggggcgaagg ctacggccgg
    12601 gtagacctcc gggtcgatgc cgcgggccag ccctacatcc tcgaagtgaa tcccaatccg
    12661 gacatctccg actccgccgg cctctcgcgc atggcccgcg cccgcgactg ggactacgag
    12721 gagctgatcg cccggatcgt ggacgaagcc ctcagtcgct ccagctcccg tcaggctgcg
    12781 gcggccctcg ccgtgggcga cgccgccacc gccacatgac cacccgcgtc gagcctcgcc
    12841 tgcgggacct gacgagcgcc gacgcagccc gaatcctcga aatcacccgc ctgaccgggg
    12901 tcttccgcga ggaagagctc ggcatcgccg cggaggtctt tgccgacggc gtcgaggcgg
    12961 ccgccaaggc ccgagccgcg gccactcccc ccaccggcga actcccctac tatctcctcg
    13021 gcgccgagct cgatggcatg ctcgtcggct ggatctgctg gggcgcgact ccctgcaccg
    13081 agcggacctg ggacctctac tggctggccg tcgatcccag ggcgcagggg catggcgtcg
    13141 ggtcgaccct ggtcgatgag atggagcggc ggctcaaggg caaggcgcgc ctcatctcta
    13201 tcgatacgtc ggggcgcgcc gactacgaac cgacccgacg cttctatcag ctcaggggat
    13261 acagggccgt ggctgtggtc ccgaacttct atgccgccgg cgacgaccag gtgattttca
    13321 ccaaggaact gtcatagcct cgccggtccg tgggacattt tttcgcatcc cccaatccac
    13381 tgtgcatggc ccgctctccc ggtggggttc cgtcggcttt ctgtgccggc atacccttgt
    13441 gttaccgccc agtttccggt attaacgaca ggcaggtccc accgcagcag tcacccattc
    13501 tgctgggagt tatcgcatga tcgctgaacc ggttggcaac agcatccggg tgcccgcggt
    13561 cgttcttctg cttcttgccg gcaccgcgag tgccgcgctg gggcaggcgg gccggctctc
    13621 cggaaaagtg accgacgaag ccagtggcgg tgcgctcgag ggcgcccgca tcgtggtc
//
LOCUS       DATIFF010000569         4491 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1764700, whole genome shotgun sequence.
ACCESSION   DATIFF010000569 DATIFF010000000
VERSION     DATIFF010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4491)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4491)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4491
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1764700"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(164..1033)
                     /gene="nadC"
                     /locus_tag="VLD58_08490"
     CDS             complement(164..1033)
                     /gene="nadC"
                     /locus_tag="VLD58_08490"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR00078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HSB54381.1"
                     /translation="MIERDLRIRIGTDSAQVAERALAEDGPEDVTTRFAVDRTQFATA
                     VIEFRTSGVLAGTAYADAVTTLCELGGVIWQSAGGSSIPAGTTVGVLQGNLAAILRAE
                     RPLLNLLQRAVGIATLTRAYVDRVQGTSARILHTRKTAPGLRLLDVSAVVAGGGHLHR
                     LDLAHTVMVKDNHWRALEQSGRSLSDVIGGARSAGIAECHVEVESLAQLQAACKAGAT
                     RLLVDNQTAATVREWAQVARNTSPGVEIEATGGITLDNVRSFAEAGADFVSIGALTHS
                     VKAADVALEVKLD"
     gene            complement(1030..1671)
                     /locus_tag="VLD58_08495"
     CDS             complement(1030..1671)
                     /locus_tag="VLD58_08495"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HSB54382.1"
                     /translation="MPFKRGILLAFLVGLALLVTFLVTGVSLVPPSLALGPCLKDYTS
                     LVSYQPRMSQLAGIRFHVGDAEAQLCYGRPLRRERVIYGQLVPFGAIWRLGANEPTRL
                     SISKPMSLAGIPLPAGRYSLYAEPGPAEWTIYVSRSTLHWGNDISPSVRAQEVGHATV
                     PVEVLPETVDTFTARIEDHGNAGRVALAFEWERTRITLELSRSSLPSNLGLRQ"
     gene            complement(1741..2784)
                     /gene="nadA"
                     /locus_tag="VLD58_08500"
     CDS             complement(1741..2784)
                     /gene="nadA"
                     /locus_tag="VLD58_08500"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HSB54383.1"
                     /translation="MTSVSPEVAGKSLPVIEPTSLTPAAITALQEEIRRLAKARNAVV
                     LAHNYQRAEVQDVADYVGDSLGLSRKAAATDADVIVFCGVHFMAETAAILAPTKRVLL
                     PDLRAGCSLAATITADDVRRWKAQFPGYIAVGYVNTTAEVKAELDYCCTSGNVLEVID
                     AIPEDRGILFCPDFFLGAHVRRMRPNRKVEVWLGECHVHRDINPHTLERHRREHPQAE
                     VLVHPECGCAGQLIYAIGEGDIPSEGVHIASTERMVQLVKERPATEFIVATETGIMHR
                     MQQLAPDKKFFPADRAAVCAYMKTITLEGTRDALKLDRFHVTVPKAVADRARAALDRM
                     VALGPAVVKKPGD"
     gene            complement(2781..4403)
                     /gene="nadB"
                     /locus_tag="VLD58_08505"
     CDS             complement(2781..4403)
                     /gene="nadB"
                     /locus_tag="VLD58_08505"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR00551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008734 - L-aspartate oxidase activity
                     [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HSB54384.1"
                     /translation="MATPPSRPIIVGTGIAGLWTAWRLAAEGQPSILLTKGLLADSAS
                     AWAQGGIAVALGPGDSPSQHAADTLAAGDGLSDPEAVRVLTNEGPDRIRELLAMGAVF
                     DRGPEGSLRFGLEAAHTRPRIIHAGGDRTGAAIVAFLTEKIRHHPLIEILRYTEVVSL
                     RHDGARVNGIYAVRRGVLLELEARDVVLATGGVGQLYAVTTNPLVATGDGWALAWRAG
                     ADLRDLEFLQFHPTALKLPGVNPAPLITEAVRGAGGILIDSEGRRFAFDADPRGELAP
                     RDVVARAVAAADATGGAWLDAREIRDFPERFPGVTQILREQGLDPATDLLPVAPALHY
                     AMGGIRTDLDGRSTREGLWAVGEVASTGVHGANRLASNSLLEGLVFADRVARALVASP
                     GEGTVRQGWTERAATRPIPASRAPLILSRWPTAARRPPVPPFPETAQEPGSQAAEEKM
                     AALRDEMRHIMTTEVGLVRTETGLTRAKRALARLARQIPPEAWRTANQVLTARLVTHA
                     ALRRRESRGGHRRLDYPPAARPAVQRTGGSPA"
BASE COUNT          690 a         1527 c         1571 g          703 t
ORIGIN      
        1 aagtgagaag taagaagtga gaaggggcgt gaggcgaggg accccggctt ccccatctcc
       61 cgtctccctt ctcccttctc ccttctccct tatcacttat tacttctcac ttcttactac
      121 tcacttctca cttctcactt ctcactactc acttctcacc ccctcagtcc agcttcactt
      181 ccagcgctac atccgcggcc ttgacactgt gcgtcagcgc cccgatcgac acgaagtccg
      241 cccccgcctc ggcgaagctc cgtacattat ccagcgtgat ccccccggtt gcctcgatct
      301 cgacgccggg gctcgtgttc cgggccacct gggcccactc cctcacagtg gcagccgtct
      361 gattgtccac cagcagccgg gtcgctcccg ccttgcaggc ggcctggagc tgggccagtg
      421 attccacttc cacatggcac tccgcgatac ccgcgctccg cgccccgccg atcacgtcgc
      481 tcaggctcct ccccgactgt tccagcgccc gccagtgatt gtccttgacc atcaccgtat
      541 gggccagatc gagccggtga aggtggccgc ctccggccac caccgcgctt acatcgagta
      601 accggagccc gggtgcggtc ttcctggtgt gcaggatcct ggcggaggtc ccctgcaccc
      661 ggtcgacgta ggctcgagtc agagtggcaa tgccgacggc gcgctggagc agattgagga
      721 gcggccgctc ggcccggagg atggcggcga ggttcccctg caggaccccc accgtcgtgc
      781 cggccgggat gctgctgccg ccggcggatt gccagatcac gccgccgagt tcacagaggg
      841 ttgtgaccgc atcggcgtag gcggtgccag cgagcacccc ggaggtgcgg aactcgatga
      901 ccgcagtggc gaactgtgtc cggtccaccg cgaatcgggt ggtgacgtct tccggtccat
      961 cctcggcgag ggcccgctcc gccacctgtg cgctgtcggt gccgatccgg atacggaggt
     1021 cgcgttcgat cactggcgga gtcccaggtt ggaaggaagg ctggaccgcg agagctccag
     1081 cgtgatgcgg gtgcgctccc actcgaaggc cagcgccacg cggccggcgt tgccgtgatc
     1141 ctcgatccgc gcggtgaagg tgtccaccgt ctccggcagc acctcgaccg gcacggtggc
     1201 atgaccgacc tcctgcgccc gcaccgaggg cgaaatgtcg ttgccccagt gcagggtgga
     1261 gcggctcacg tagatcgtcc actcggcagg gccgggctcg gcgtacaacg agtatcggcc
     1321 ggccgggagg ggaattccag ccagggacat cggcttggag atggacaacc gggtcggttc
     1381 attggcgccg agacgccaga tggcaccgaa gggcaccagc tggccgtaga tcacccgttc
     1441 acgccggagc ggccggccgt agcagagctg ggcctctgcg tcgcctacat gaaagcggat
     1501 gccggcgagc tggctcatgc gaggctggta ggacaccagc gaggtgtagt ctttgagaca
     1561 ggggcccagg gcgagggaag gggggacgag cgaaacaccg gtcacaagga aggtgaccag
     1621 gagggcgagc cccacaagaa aggccagcag gataccgcgc ttgaatggca atttggtctc
     1681 ggctggaggc aaatggctga cagctaacgg ccaatggcca acggccatcg gccaacggcc
     1741 tcaatcccct ggcttcttca ccaccgccgg ccccagcgcc accatccggt ccagcgcggc
     1801 ccgggcccgg tcggctacag ccttcggcac ggtcacgtgg aaccggtcca gcttgagcgc
     1861 gtcgcgagtg ccttccagcg tgatcgtctt catataggca cagaccgccg cgcggtccgc
     1921 cgggaagaac ttcttgtccg gcgcgagttg ctgcatccgg tgcatgatgc cggtctcggt
     1981 cgccacgatg aactcggtgg ccgggcgctc cttcaccagc tgcaccatcc gctcggtcga
     2041 tgcgatgtgc accccttcgg acgggatgtc accctcgccg atggcgtaga tcagctggcc
     2101 ggcgcagcca cactcggggt gcaccagtac ctcggcctgg gggtgctcgc gccggtgccg
     2161 ctccagggtg tgcgggttga tatctcggtg cacgtggcac tcccccagcc agacttccac
     2221 cttgcggttg ggccgcatcc gccgcacgtg ggcgccgagg aagaagtcgg gacagaagag
     2281 gatgcccctg tcctccggga tcgcgtcgat cacctcgagc acgttgccgc tggtgcagca
     2341 gtagtcgagc tccgccttca cctcggcggt ggtgttgacg taaccaaccg cgatgtagcc
     2401 ggggaactgc gccttccacc ggcggacgtc gtcggccgtg atcgtcgcgg cgagggagca
     2461 accggcccgg agatcgggga gcagcacccg cttcgtgggc gcgaggatgg ccgcggtctc
     2521 ggccatgaag tgcaccccgc agaagacaat cacgtcggcg tcggtcgcgg ccgccttgcg
     2581 ggagagaccc agcgagtcgc ccacgtaatc ggcgacgtcc tggacctcgg cacgctgata
     2641 gttgtgggcc aggaccaccg cgttgcgcgc cttggcgaga cggcggatct cctcctggag
     2701 tgcggtaatc gccgcgggcg tgagcgaggt gggttcaatg accgggagac ttttcccggc
     2761 gacctcaggc gataccgacg tcatgcggga ctcccaccag tgcgttgaac cgccggccgt
     2821 gcggcgggag gatagtcgag gcgccggtga ccgccccggc tctcgcgccg ccggagcgcg
     2881 gcgtgggtga cgagccgggc agtgagcacc tggttggcgg tgcgccacgc ctcgggcgga
     2941 atctgccgcg ccagtctggc cagcgcccgc ttggcgcggg tgagacccgt ctcggtgcgc
     3001 accaggccga cctcggtggt catgatgtga cgcatctcgt cccggagcgc cgccatcttc
     3061 tcctcggccg cctggctgcc gggctcctgt gccgtctccg ggaacggcgg gaccgggggg
     3121 cggcgagccg cggtgggcca gcggctcagg atcaagggtg cccggctcgc cgggatggga
     3181 cgggttgcgg cgcgttcggt ccagccctgt ctcacggtgc cttcgccggg tgaggcgacg
     3241 agcgcccgcg ccacccggtc ggcaaagacc agcccttcga gcagcgaatt cgaggcgagc
     3301 cggttggcgc cgtggacacc ggtactcgcc acctcgccca ccgcccagag cccttcgcgg
     3361 gtactccggc catcgaggtc ggtccggatc ccgcccatcg cgtagtggag cgccggtgcg
     3421 accggcagca ggtcggtcgc cggatcgagt ccctgctccc ggaggatctg ggtgacgccg
     3481 gggaatcgct ccgggaagtc tcgaatctcg cgtgcatcga gccaggcccc gccggtcgca
     3541 tcggctgcgg ccacggcgcg ggcaacgacg tctcgcgggg ccagctcacc gcgcggatcg
     3601 gcgtcgaacg caaagcgccg accttccgag tcgatcagga tcccacccgc gccccgcacc
     3661 gcctcggtga tgagcggcgc cgggttgacg ccgggcagct tgagcgcggt gggatggaac
     3721 tggagaaatt cgagatcgcg gagatcggcg ccggcccgcc aggccagcgc ccagccatcc
     3781 ccggtggcca ccagtggatt ggtggtgacg gcataaagct gtcctacgcc gccggtggcg
     3841 aggaccacgt cgcgggcctc gagttcgagc agcacaccac ggcgaaccgc gtagatcccg
     3901 ttcacccgcg cgccgtcatg ccggagcgag acgacctcgg tgtagcgcag gatctcgatc
     3961 aggggatggt gacggatctt ctcggtgaga aacgcgacga tggcggcccc ggttcggtcg
     4021 ccgccggcgt gaatgatccg cggccgggtg tgcgcggcct cgagcccgaa cctgagcgac
     4081 ccttcgggcc cgcggtcgaa caccgcgccc atggcgagga gctcgcggat ccggtcggga
     4141 ccctcgttgg tgaggacgcg gacggcttcc gggtcggaga ggccgtcacc cgcggcgagg
     4201 gtgtcggcgg cgtgctggct gggactgtca ccggggccga gcgcgacggc gatcccgccc
     4261 tgggcccagg cgctggcgct gtcggccagc agacccttgg tgagcaggat ggagggctgc
     4321 ccctccgcgg ccagccgcca cgcggtccac aacccggcga tgccggtgcc gacgatgatg
     4381 ggacgggaag ggggcgtggc catgggggat gaaatatacc ggcgttcggc tggcccggcg
     4441 gaagggtggg tcatgcacgg cggcgggggg ccggaggagc agcggtgcgc c
//
LOCUS       DATIFF010000570         4735 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1764706, whole genome shotgun sequence.
ACCESSION   DATIFF010000570 DATIFF010000000
VERSION     DATIFF010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4735
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1764706"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..356)
                     /locus_tag="VLD58_08510"
     CDS             complement(<1..356)
                     /locus_tag="VLD58_08510"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HSB54385.1"
                     /translation="MVHALLLAAGKGSRFGADKLLVPLRGKPLIVHSATAVASAIAGG
                     VLGGGVAVIPKGAAGLTWPLETAGLTVVENPDAAAGMSTSLRRGLASLASERPMVNGA
                     LIVLADQPALSAAVIA"
     gene            complement(381..1238)
                     /locus_tag="VLD58_08515"
     CDS             complement(381..1238)
                     /locus_tag="VLD58_08515"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HSB54386.1"
                     /translation="MIPTSFDYVRAGSVKEALNLLAAGDGSKVIAGGHSLLPLMRFRL
                     VQTPKLIDISRLDELKGVQEFKKGVRIGAATTYADLVESALLKERCPIVAEVAAAIGD
                     IQVRNRGTIGGSLAHADPASDMPAVMLALDAEFQFRSKKGGRRTARARGFFQGAFATE
                     MAEGELLTDILLPGMGRNAAAYHAFDSAASGYAIAGVCAVVARKRSSISEISVAFTGV
                     GEIAFLATGFDPVIGTKCDLAVVDQCARDALGKVDIGGDVHAPAEYRRHLAVVAAKRA
                     VQAAYERAG"
     gene            complement(1235..3589)
                     /locus_tag="VLD58_08520"
     CDS             complement(1235..3589)
                     /locus_tag="VLD58_08520"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSB54387.1"
                     /translation="MATLFGSGIKRREDPRLITGSATYTDDVKLPGLTYAMFVRSPYA
                     HARVTSINVESAKHAPGVVAVYTGQDVKDALVPVPCAWNPPNCDLKVPPHPLLAYDKV
                     RYVGDAVAMIVAETRAAARDAVDLVEVEYDPLPATADPEKAAQPGAAQLHAEVPGNIA
                     FTWTVAGGDAEAAFNSAEVKVSQRIVQQRLLPTAMEARAAVASYNRGTGQLTLWCTSQ
                     NPHIHRFLCSVMLKLPEHRVRVIAPEVGGGFGSKIPAYADEALTAYAAMQLGRPVKWT
                     EDRSENYKVTIHGRDHIEYVEMCGTKDGRITGLRTRVYAGLGAYASTAGPGIPTILHG
                     LVYSGAYTIPNIHGVVQGVYTNGTPVDAYRGAGRPEAAFLVERLVDIFARKIEMDPVE
                     VRRRNFIPKDKFPYTVATGLTYDSGNYEAALEKALGMLDYRGFRAEQEKARRQGRYIG
                     VGAVSYIEICGLGPSQVAGAVGFGAGLYDSALVRVYPTGMVKVYIGASPHGQGEETTF
                     AQIVADEFGYPVENVEIVHGDTDNTPQGWGTYGSRTTAVCGSAVKNAALKVKEKARKL
                     AAHLLEANEADLEWKEGRFQVKGSPDKAKGFAEVALMANVAWNMPAGMEPGLEASAFF
                     DPTNFVYPFGTHICTVEVDVDTGVVKILRYIAVDDCGPPINPVIVDGQIHGGVIQGIG
                     EALQEIAIYDEEAQLLTGTMMDYAVPKASQMPKLEIGHTITPSPVNPLGVKGCGEAGT
                     IASAAAVVGAVCDALAPFGITHIDKPLTPARVWAAIQKAKGAKA"
     gene            complement(3600..4073)
                     /locus_tag="VLD58_08525"
     CDS             complement(3600..4073)
                     /locus_tag="VLD58_08525"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSB54388.1"
                     /translation="MKRSVALKVNGRVQTVDVEPRTLLVHALRDDLNLTGTHIGCDTS
                     QCGACTILVDGRAVKSCTVLAMQAEGSEITTIEGLARGDTLHPMQNAFWEKHGLQCGF
                     CTPGMILTAIDFLQHHPGDPTDEEIRHAIEGNYCRCTGYQNIVAAIKAASATIRA"
     gene            4379..4451
                     /locus_tag="VLD58_08530"
     tRNA            4379..4451
                     /locus_tag="VLD58_08530"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4412..4414,aa:Asn,seq:gtt)
BASE COUNT          718 a         1559 c         1636 g          822 t
ORIGIN      
        1 tgggcaatta ccgcggcgct gagcgcgggc tggtcggcga ggacgatcag ggcgccgttc
       61 accatcggtc gttcactggc cagcgaagcc aggccccgcc ggagcgaggt cgacatgccg
      121 gccgcggcgt cggggttctc caccaccgtg agtccggcgg tctcgagcgg ccaggtcagg
      181 ccggctgccc ctttgggaat cacggcgacg ccgcccccca gcaccccacc agcaatcgcg
      241 ctggcaacgg ccgtggcgct gtggacgatc agcggcttgc cgcggagcgg caccagcagc
      301 ttgtcagcgc caaaccgcga acctttgccg gcggcgagca gcagggcatg gaccatggat
      361 tgcgttcccc ggtcttcccg tcatccggcc cgttcgtagg ccgcctgcac cgcccgcttt
      421 gccgccacca cggcgaggtg ccggcgatac tcggcgggcg catgcacgtc cccgccgatg
      481 tcgaccttgc cgagcgcatc cctggcgcac tggtccacca cggcaagatc gcacttggta
      541 ccgatcaccg ggtcgaaccc cgtcgcaagg aacgcgattt cgcccactcc ggtgaatgcc
      601 acgctgattt ccgagatgct ggagcgcttc cgcgccacca cagcgcacac cccggcgatc
      661 gcatagcccg acgccgccga atcgaaggca tgataggccg cggcattgcg gcccatgccg
      721 gggaggagaa tgtcggtgag cagttcgccc tccgccatct cggttgcgaa ggcgccctgg
      781 aagaagcccc gcgccctggc ggtgcgccgg ccacccttct tggagcggaa ctggaactcg
      841 gcgtcgagcg ccagcatcac cgccggcatg tcgctcgccg ggtcggcatg ggccagcgat
      901 ccgccgatgg tgccacggtt cctcacctgg atgtcgccga tggccgccgc gacttccgcc
      961 acgatggggc agcgttcctt gaggagcgcg ctttcgacca ggtcggcgta ggtcgtggcg
     1021 gctccgatcc gcacaccctt cttgaactcc tgcaccccct tgagctcgtc gagccgggag
     1081 atgtcgatca gcttgggggt ctgcaccagg cggaagcgca tcagcggcag caggctgtga
     1141 ccgcccgcga tcaccttgga gccgtcgccg gccgcgagca ggttgagcgc ttccttcacg
     1201 ctccccgccc gcacgtagtc aaagctggtg ggaatcatgc cttggctccc ttcgccttct
     1261 ggatggcggc ccagacccgg gccggcgtga gaggcttgtc gatgtgggtg atgccgaacg
     1321 gggccagcgc gtcacacacc gcgcccacca ccgcggcggc ggatgcgatg gtgccggcct
     1381 cgccacagcc cttcacgccg agcgggttga cgggcgacgg tgtgatggtg tggccgatct
     1441 cgagcttcgg catctggctc gccttgggca cggcgtagtc catcatcgtg ccggtgagga
     1501 gctgggcttc ctcgtcgtag atcgcgattt cctggagcgc ctcgccgatg ccctggatca
     1561 ccccgccatg gatctggccg tcgacgatca ccgggttgat cggcgggccg cagtcgtcca
     1621 ccgcgatata gcggaggatc ttcaccaccc cggtgtcgac atcgacctcg acggtgcaga
     1681 tgtgggtgcc gaagggatag acgaagttgg tcgggtcgaa gaaggccgag gcttcgagac
     1741 ccggctccat cccggcgggc atgttccagg cgacgttcgc catcagcgcc acctcggcga
     1801 agcccttcgc cttgtccggc gagcccttca cctggaacct gccctccttc cactccaggt
     1861 cggcttcgtt ggcctcgagc agatgggcgg cgagcttccg cgccttctcc ttcaccttga
     1921 gggcggcgtt cttgaccgcc gagccgcaga ccgcggtggt gcggctgccg taggtgcccc
     1981 agccctgcgg ggtgttgtcg gtgtcgccgt ggacgatctc cacgttctcg accgggtagc
     2041 cgaactcgtc ggccacgatc tgcgcgaagg tggtctcttc accctgcccg tggggcgagg
     2101 cgccgatgta caccttcacc atcccggtgg ggtagacccg cacgagggcc gagtcgtaga
     2161 gaccggcgcc gaacccgacg gcgcccgcca cctggctcgg gcccaggccg cagatctcga
     2221 tgtagctcac cgcaccgacg ccgatgtacc gcccctgccg ccgcgccttc tcctgctcgg
     2281 cgcggaagcc gcggtagtcg agcatgccga gggccttctc gagcgcggcc tcgtagttgc
     2341 cggagtcgta ggtgaggccg gtggcgacgg tgtaggggaa cttgtccttc gggatgaagt
     2401 tgcggcgccg gacttcgacc ggatccatct cgatcttccg ggcgaagata tcgaccaggc
     2461 gctcgaccag gaacgcggcc tcggggcggc cggccccgcg gtaggcgtcg accggggtgc
     2521 cgttggtgta caccccctgc accaccccat ggatgttggg aatggtgtag gcgccggagt
     2581 agaccaggcc gtggagaatc gtcgggatgc cggggcccgc ggtcgaggcg taggcgccga
     2641 gtccggcata aacccgcgtg cggagaccgg tgatacggcc gtccttggtg ccgcacatct
     2701 cgacatactc gatgtgatcg cggccgtgga tcgtcacctt gtagttctcg gagcggtcct
     2761 cggtccactt caccggccgg ccgagctgca ttgcggcgta cgcggtgagg gcttcgtcgg
     2821 cataggcggg gatcttggag ccgaacccac cgccgacctc cggggcgatg acccgcaccc
     2881 ggtgctcggg aagcttgagc atcaccgagc agaggaagcg atggatgtgg gggttttgac
     2941 tggtgcacca gagggtgagc tggccggtgc cgcggttgta gctcgcgacg gcggcacggg
     3001 cctccatcgc agtgggaagc agccgctgct gcacgatccg ctggctcacc ttcacttcgg
     3061 cggagttgaa cgccgcctcg gcgtcacccc cggcgacggt ccaggtgaag gcgatgttac
     3121 cgggcacctc ggcgtggagc tgggcggcgc cgggctgggc ggccttctct gggtcggcgg
     3181 tggcgggcag cggatcgtac tcgacctcca ccaggtcgac cgcgtcccgg gccgcggccc
     3241 gggtctcggc cacgatcatc gcgacggcat cgccgacgta gcgcaccttg tcgtacgcca
     3301 ggagcggatg gggcgggacc ttgaggtcgc aattgggcgg gttccaggcg cagggcaccg
     3361 ggaccagcgc gtccttcacg tcctggccgg tgtagaccgc caccacgccg ggggcgtgct
     3421 tcgccgactc gacgttgatg gacgtgaccc tggcgtgggc gtagggactc cgcacgaaca
     3481 tcgcgtaggt caggcccggc agcttcacat cgtcggtata ggtcgcgctg ccggtgatga
     3541 gccgggggtc ttcccgccgc ttgatgccgg agccgaacag ggtagccatg gagtgttcct
     3601 caggcgcgga tggtggcgga ggcggccttg atggcggcga cgatgttctg gtaaccggtg
     3661 cagcggcagt agttcccttc gatggcgtgg cggatctctt cgtcggtggg gtctcccggg
     3721 tgatgctgga ggaagtcgat cgccgtcagg atcatcccgg gagtgcagaa accacactga
     3781 agcccgtgct tttcccagaa cgcattctgc atcgggtgca gggtgtcgcc cctggccagt
     3841 ccctcgatcg tggtgatctc gctcccctcg gcctgcatgg ccagcacggt acagctcttc
     3901 accgcgcggc cgtcgaccag gatggtgcag gcgccgcact gagaggtatc gcagccgata
     3961 tgggtgccgg tgagattgag gtcgtcccgg agcgcgtgga ccagcagggt gcgtggctcg
     4021 acgtctaccg tctggactcg accgttgacc ttgagggcga cggagcgttt catgcggaag
     4081 ggtcctctga cagggaatgg gcagggagcc gcggaaggcg tcgggccgac ggggctggac
     4141 cggctacgct acggtacccc aagtaagggg tcaagagtcg ggatcaggaa cccagtctaa
     4201 agaacttgac gcctccgctc gataactgta ctatgcgggc cctatgctga accggccgaa
     4261 tttcaaccgc aatcgaaact cgaatcgact ccccagggag acgggtcggg cgtaggcgat
     4321 ttcttcgaat cgcgcagtat gccgccgacc cgtcgcatcg cgacgggttt tggatttttg
     4381 gggtgtagct caactggcag agcgcccggc tgttaaccgg gaggttgcag gttcgacccc
     4441 tgccgcccca gtatcacgcc ggtcgttgtc caccttcggt ggcggcggcc ggcggttctg
     4501 ttctccggag ttgcgagtct tcaccgcgga ggcgcaaagg cgcagagggc cgcagagaga
     4561 tccagctcgt tcagctgatc cttcgagccc ggatgcgttt tggtgcactg atcgcagggc
     4621 agggagccgt gccaacgatg agttcacacc aatacgccaa ggctggtttc gaagttatcc
     4681 gtcccgtccg ggatccctct gcggccctcc gcgcctccgc gcctctgcgg tgaac
//
LOCUS       DATIFF010000571         1317 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2226170, whole genome shotgun sequence.
ACCESSION   DATIFF010000571 DATIFF010000000
VERSION     DATIFF010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2226170"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..957
                     /locus_tag="VLD58_08535"
     CDS             <1..957
                     /locus_tag="VLD58_08535"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HSB54389.1"
                     /translation="SRIEMSDADREVIDNMGGYGTVEGYTPNDVYGPYGPVQSAAHQD
                     GRWPANVALAHHPDCKEVGTRKVPTGTAVNRNHEPGSVKPGAVGPTGLRNQTEDVTYG
                     TDGTETIPAYECVRGCPVAMLDEQSGERPSTGTPDRPAKPGTTESAGYGFWAGKGVQG
                     PLYNDEGGASRFFYTSKASREERNAGLDSFEDRPGPSEDYGTKAQHPMKPEGEPNLVL
                     PTKNPHPTVKNIDLMRWLVKMVTPPGGLVLDPFTGSGSTGCAAVLDGFDFLGIEREDD
                     YVQIARARIAFWADQQADDVATILAGERRAREHRERGQLTLG"
     gene            954..1214
                     /locus_tag="VLD58_08540"
     CDS             954..1214
                     /locus_tag="VLD58_08540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54390.1"
                     /translation="MKVAQCRSCDAPIIWTLTIGGSRQPVDAKPSPKVGNLLLVKRND
                     DTPLSLSISRLDEAQRAAAKRNGVALYMPHHGTCPDGDSWRK"
BASE COUNT          247 a          453 c          470 g          147 t
ORIGIN      
        1 agccggatcg agatgagcga cgccgaccgc gaggtgatcg acaacatggg cggctacggc
       61 accgtcgagg gctacacccc gaacgacgtc tacggaccct acgggccggt ccagtccgcc
      121 gcgcaccagg acgggcgctg gccagcgaat gtcgcgctgg cgcaccaccc cgactgcaag
      181 gaggtcggga cccgcaaggt gccgaccggc acagcggtca accgcaacca cgagccgggc
      241 agcgtgaagc cgggagcggt cgggccgacg ggcctgcgga atcagaccga ggacgtgacc
      301 tacggcacgg acggcaccga gacgattccc gcctacgagt gcgtgcgtgg ttgcccggtg
      361 gcgatgctcg acgagcagag cggggagcgc ccgagcaccg ggacccctga ccggccagcc
      421 aagcccggca ccaccgagag cgcgggctac ggcttctggg cgggcaaggg tgtgcaaggc
      481 cctctctaca acgacgaggg cggcgcgagc cgcttcttct acaccagcaa ggcgagccgc
      541 gaggagcgaa acgccgggct ggacagcttc gaggaccggc cgggaccctc cgaggactac
      601 gggaccaagg cgcagcaccc gatgaagccc gagggggagc cgaacctggt gctgccgacc
      661 aagaatcccc atccgaccgt gaagaacatc gacctgatgc gctggctggt gaagatggtc
      721 accccgcccg gcggcctggt gctggacccc ttcacgggca gcggcagcac gggctgcgcc
      781 gccgtgctcg acggcttcga tttcctgggc atagagcgcg aggacgacta cgtgcagatc
      841 gcccgagcgc ggatcgcctt ctgggctgac cagcaggcgg atgacgtggc gaccatcctg
      901 gccggggagc gccgggccag ggagcaccgc gagcgcgggc agctgacgct cggatgaagg
      961 tcgcccagtg cagatcctgc gatgcgccga tcatctggac gctcaccatc ggcggcagcc
     1021 gccagccggt ggacgccaag ccgtcgccga aagtgggcaa cctgctgctc gtgaagcgca
     1081 acgacgatac gccgctctcg ctgtcgatca gccgcttgga tgaagcgcag cgggcagcgg
     1141 cgaagcgcaa cggcgtggcg ctctacatgc cgcaccacgg cacctgcccc gacggcgact
     1201 cctggcgcaa gtgatggacc cgccctcgac caaggcgcga accctgaagc agcaggtagc
     1261 cgaggcagcc gaggacgcgg gttggccgaa gctcggccgc gccgtccagc tcgccct
//
LOCUS       DATIFF010000572         2171 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_73594, whole genome shotgun sequence.
ACCESSION   DATIFF010000572 DATIFF010000000
VERSION     DATIFF010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2171
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73594"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..528)
                     /locus_tag="VLD58_08545"
     CDS             complement(<1..528)
                     /locus_tag="VLD58_08545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine synthetase N-terminal
                     domain-containing protein"
                     /protein_id="HSB54391.1"
                     /translation="MAKTHRHVFTSESVTEGHPDKVADQISDAVLDAILTSDAKGRVA
                     CETLVTTGMAIVAGEITTSTYVHIPAIVRDTIKRIGYVDANYGIDGNTCAVLSSIDNQ
                     SPDIAQGVDTGGAGDQGMMFGYACNETAELMPLPIMLAHKLTRRLSDVRKEGLMDYLR
                     PDGKSQVTVEYENHKP"
     gene            complement(579..>2171)
                     /gene="ptsP"
                     /locus_tag="VLD58_08550"
     CDS             complement(579..>2171)
                     /gene="ptsP"
                     /locus_tag="VLD58_08550"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HSB54392.1"
                     /translation="EESHIFDAQIMMAQDTDFLGGVEQLVRESGMSAETAYEFKALEI
                     RNIWGGSGNAMLRDRLADLSAIHNRMLLHLLGRPQDEFWATMTDEQVVIVARELSPGL
                     TVQLDRDHVVGLVSEEGTRTSHAAILAHSLGIPAVMGAVGALERIKPGTQLLIDGQSG
                     VILLEPTRAEIERVRAQVSRRQKLELEFEAAVTQAAITPDGVAITLMGNVDLPDEIIP
                     AAKHDAHGVGLLRTEFLVTGRAALPTEDEQTEYFRRVSDAFPGYPVIVRSFDLGGDKF
                     PAAFRAPPEANPFLGWRSIRVCLDHPEIFRPQLRAVLRAAADRQIQLMLPLVTLIDEV
                     TETKALLLEEALNLAREGVRAAASVPVGVMIETPAAALIADELAAHSAFFSVGTNDLV
                     QYTLAVDRGNARLAERFTPFHPAVVRQLKMVLDAGNRAGITVSVCGEMASDPLAVVLL
                     LGLGYRTLSVAPPALPFLKWVVRTIPIEVAARAAFAALDATQSSDITNTLRTAMQEHF
                     DPRMLDALSALPRQTGAATLRG"
BASE COUNT          342 a          739 c          735 g          355 t
ORIGIN      
        1 cggcttgtga ttctcgtatt cgaccgtcac ctgcgatttg ccgtcgggcc tgagataatc
       61 catcaagcct tccttgcgca cgtccgaaag ccgccgggtc agcttgtgcg ccagcatgat
      121 cggcagcggc atcagttctg ccgtttcatt gcaggcatag ccgaacatca tgccctggtc
      181 gccggcgccg ccggtatcca cgccctgggc gatatcgggc gactgattgt cgatcgagct
      241 cagcacggcg caggtgttgc cgtcgatccc gtagttggca tccacatacc cgatccgctt
      301 gatcgtgtcg cggacgatcg ccgggatgtg cacgtaggtg gatgtggtga tttcaccggc
      361 gacgatggcc atgccggtgg tgaccagggt ctcgcaggcc acccgtccct tggcgtcact
      421 ggtgagaatg gcgtcgagga cggcgtcgga gatctggtcg gcaaccttgt caggatgccc
      481 ctcggtaacc gactccgagg tgaacacgtg gcgatgggtc ttggccattg ggtgaaagtc
      541 gaagatgaga aggtgtgcgg cccgccggcc gcgccaaatt acccgcgcaa ggtagcggcg
      601 ccggtctgac gcggcaacgc cgagagagca tccagcatgc gcggatcgaa gtgctcctgc
      661 atggccgtgc ggagggtgtt ggtgatgtcg gacgactggg tcgcgtcgag cgcggcgaac
      721 gcggcccggg cagccacctc gatcgggatg gtccgcacca cccacttgag gaacggcagc
      781 gccggcggcg ccacgctgag ggtccggtac cccaggccca ggagcagcac caccgccagc
      841 ggatccgagg ccatctcccc gcagacgctc accgtgatgc cggcccggtt gccggcgtcc
      901 agcaccatct tgagctgccg caccaccgcc ggatggaagg gagtgaagcg ctccgccagg
      961 cgggcattcc cccggtcgac cgcgagggtg tactgcacca ggtcgttggt gcccacgctg
     1021 aagaaggcgc tgtgcgccgc cagctcgtcc gcgatcagcg ccgcggccgg cgtctcgatc
     1081 atcaccccga ccggcaccga ggccgccgcc cggacgccct cccgcgccag gttgagcgcc
     1141 tcctccagca gcaacgcctt cgtctcggtc acctcatcga tcagcgtcac cagcgggagc
     1201 atgagctgga tctgccggtc ggccgcggcc cggagcaccg cccggagctg gggccggaag
     1261 atctcgggat ggtcgaggca gacgcggatc gagcgccatc ccaggaacgg gttggcctcg
     1321 ggcggcgccc ggaatgcggc cgggaacttg tcgcccccga gatcgaagga gcgcacgatc
     1381 accgggtatc ccgggaaggc atcgctgacc cggcggaaat actcggtctg ctcgtcctcg
     1441 gtcggaaggg ccgcgcggcc ggtcaccagg aattcggtgc ggagcagccc taccccgtgc
     1501 gcatcgtgct tggcggcggg aatgatctcg tcggggagat cgacgtttcc catcagcgtg
     1561 atcgccacgc cgtcgggcgt gatcgccgcc tgggtgacgg ccgcctcgaa ctcgagctcg
     1621 agtttctggc gccgggagac ctgggcccgc acccgttcga tctcggcccg ggtgggctcc
     1681 agcaggatga cgccgctctg cccgtcgatc aggagctggg tgccgggctt gatccgctcc
     1741 agcgcgccca ccgcgcccat caccgcggga attcccagcg agtgggccag gatcgcggcg
     1801 tgcgaggtcc gggtgccttc ctcgctcacc agcccgacca catgatcgcg gtcgagctgc
     1861 accgtgagcc cgggcgaaag ctcccgcgcc acgatcacga cctgctcgtc ggtcatcgtg
     1921 gcccagaact cgtcctgggg ccggcccagc aggtggagca gcatccggtt gtgaatcgcc
     1981 gagaggtcgg ccaggcggtc acgcagcatg gcgttgcccg acccgcccca gatattgcgg
     2041 atctcgagcg ccttgaactc gtacgccgtc tcggcgctca tcccgctctc ccggacgagc
     2101 tgctccactc cgcccaggaa gtcggtgtcc tgcgccatca tgatctgggc gtcgaagatg
     2161 tgggactcct c
//
LOCUS       DATIFF010000573         2065 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1151152, whole genome shotgun sequence.
ACCESSION   DATIFF010000573 DATIFF010000000
VERSION     DATIFF010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1151152"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1758
                     /locus_tag="VLD58_08555"
     CDS             <1..1758
                     /locus_tag="VLD58_08555"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54393.1"
                     /translation="TSKGHVIGSPGYMSPEQIDGSEFIDGRSDIYSLGCMLFEMLVGQ
                     APFRGTTVTAIIANRLTNPVPSARAFRELVPEAVDAAIIRAMATIPADRFTTAAQFAE
                     ALGTPATVAIAVGTAQAMAREVSAAKSVAVLPLENMSTDPENEYFSDGITDDIIAQLS
                     KISALKVISRTSSMQYKKTTKKIAAIAEELGVAAVLEGSVRRAGSRVRIVVHLVEPRS
                     EKHLWGDTFDRQLTDVFEVQSEVAQQITGALAVALSPEEKSRVEKKATGSAEAYNHYL
                     LGRFHVNKWSEENVLKAIDHFNEAIERDAGYALAYAGLADAYELLSIGLSHRPALENL
                     TLAKRMALKALELDDTLAEAHTSLAYARWLGDLDWSTAEREFTRALELKSSYVPAHQW
                     FAEYQAALGRHEQALTQIRKAQQLDPLAVPVNRAVGWVLYFARQYDQAIAELTKALSM
                     DAEFFGARLVLWWAQVAKGEAESATTDIRRELQKPGAHSVKQLMLAYARAVAGATEEA
                     RGLLWELEEKLVRDDRLALLSTFPLAALGEKDRAFQQLARAYEHREPGLMFLKVAPWL
                     DPLRSDPRFGVLQEKLGVG"
BASE COUNT          366 a          648 c          760 g          291 t
ORIGIN      
        1 acctccaagg ggcacgtcat cggtagcccc ggctacatga gcccggagca gatcgacggc
       61 agcgaattca tcgacgggcg gagcgatatc tacagtctcg gctgcatgct cttcgagatg
      121 ctggtcggcc aggccccatt ccggggcacc acggtcacgg cgatcatcgc caaccgtctc
      181 accaatccgg tcccctcggc ccgggccttc cgggaactgg tgccggaggc ggtggacgcc
      241 gcgatcatcc gggccatggc cacgatcccg gccgaccgtt tcaccaccgc ggcgcagttc
      301 gccgaggcgc tcggcacgcc ggccacggtg gccatcgcgg tgggcacggc ccaggcgatg
      361 gcgcgcgagg tgagcgccgc caagtcggtg gcggtgctgc cgctcgagaa catgagcacc
      421 gacccggaga acgagtactt cagcgatggg atcaccgacg acatcatcgc ccagctctcc
      481 aagatcagcg cgctcaaggt catctcccgg accagctcga tgcagtacaa gaagaccacc
      541 aagaagatcg cggccatcgc cgaggagctg ggggtggcgg cggtgctgga aggcagtgtg
      601 cgccgggcgg ggagccgggt gcggatcgtg gtgcacctgg tcgagcccag gagcgagaaa
      661 cacctctggg gcgacacctt cgaccggcag ctgaccgacg tcttcgaagt gcagagcgag
      721 gtggcgcagc agatcaccgg agcgctggcg gtagcgcttt cgccggaaga gaagagccgg
      781 gtggagaaga aggcgacggg cagcgccgag gcgtacaacc actacctgct ggggcggttc
      841 cacgtcaaca agtggtcgga agagaatgtg ctcaaggcga tcgaccactt caacgaagcg
      901 atcgaacgtg atgccggcta cgccctggcg tatgcgggcc tcgcggacgc ctacgagctc
      961 ctgagcatcg gcctgagcca tcggccggcg ctcgagaatc tcaccctcgc caaacggatg
     1021 gcgctcaagg cgctggagct ggacgacacc ctggcggagg cgcacacctc gctcgcgtat
     1081 gcccgctggc tgggcgacct cgactggtcc acggcggaac gggagttcac ccgtgcgctg
     1141 gagctcaagt cgagctacgt cccggcacac cagtggttcg ccgaatacca ggcggcgctc
     1201 ggccggcacg agcaggcgct gacccagatc cggaaggccc agcagctcga cccgctcgcc
     1261 gtgccggtga accgcgcggt cgggtgggtg ctctacttcg cccggcagta cgaccaggcc
     1321 atcgcggaac tcaccaaggc gctctcgatg gacgccgagt tcttcggggc ccggctggtg
     1381 ctgtggtggg cccaggtcgc gaagggtgag gccgagtcgg ccacgaccga catccgccgg
     1441 gaattgcaga agcccggcgc gcacagcgtg aaacagctga tgctggctta cgcgagagcg
     1501 gtggcgggcg cgaccgaaga agcgagggga ctcctgtggg agttggagga gaagctggtt
     1561 cgcgacgacc ggttggcgct cctgagcacc ttcccgctgg ccgcgctagg cgagaaggac
     1621 cgggcgttcc agcagctggc ccgggcgtac gagcatcggg aaccggggct catgttcctc
     1681 aaggtggcgc cgtggctgga cccgctgcgg tcggacccgc ggttcggggt gttgcaggag
     1741 aagctggggg tggggtgagg ggctaggggc taggggctag gggcaagggg ctaggggctt
     1801 ggggctaggg gagtcggcgg ggtcgtgggg agcagaccgt gcgccgctcg gtgatccatc
     1861 caatcccttg cggccacgag gctgcgacgc cacgaccacg ccgatctccc cgcatagcag
     1921 gcaaacgcgc atgcagagta gatccctcgc tgcgctcggg atgacagtgt ctggggcgcg
     1981 aggggcgagg ggtgcgggtg ctgggaccga cggcgcgtta gctcctgtcc ctgcctgcgc
     2041 cggaagaatg ccgagagcta cagcg
//
LOCUS       DATIFF010000574        10702 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1764987, whole genome shotgun sequence.
ACCESSION   DATIFF010000574 DATIFF010000000
VERSION     DATIFF010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10702
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1764987"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1268
                     /locus_tag="VLD58_08560"
     CDS             <1..1268
                     /locus_tag="VLD58_08560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54394.1"
                     /translation="FNHGKLGFPLAGAHSSAACRACHQSLDFKGTTRTCASCHTDVHR
                     GELGADCAKCHTPRSFLDRSTMTRAHQLTRFPLEGAHLAADCTSCHAPAAQGGQQFVA
                     RQTTCVSCHQADFASAKDPDHSAGGFPRECASCHAVTVWSRARFDHSASRFALTGAHR
                     AVTCSQCHVNNQFTGTRTDCVGCHQNDYNGAAQPSHTQAQLPTDCVLCHSTTSWNANY
                     DHSRTQFPLTGAHRAVNCMDCHSDNVYRGKPTDCVSCHLPDYNGAADPNHKTAQFPTT
                     CVPCHSTTAWQPASFDHNASSFPLTGSHKAVACADCHSDGVYNGKPTTCQSCHLGDFN
                     RATSPNHAQLGWPQTCITCHAGSTNTVAWDSGVTLPSQYHTMFSVNHEGARGDCTQCH
                     LTTNYSQSTCSTHHHPPSCTYLNRSTCGG"
     gene            1279..2910
                     /locus_tag="VLD58_08565"
     CDS             1279..2910
                     /locus_tag="VLD58_08565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54395.1"
                     /translation="MRTRHPLAWGAAAIVLLATPAVLAGQDSTAARTAAATSAADSAV
                     RTAPVTYVAGSTIYVAAGRADGLVEGQQLFIKRQNGTSVTLKVAFLSSRQASCEVVGE
                     AASVVVGEQVTFTPKAASSAAKGSTAVAARRPSRHRLNGPGLHGRVGARYLVAKEETL
                     NGGFSQPSFDLRLDGSQLGGTPLGLNADLRTRRTTSTASDGSSTVDGRTRVYQAALLW
                     NTPGAGFRMALGRQYLTAVTSVTLFDGALLELNSSHFGFGAFGGVEPEPANLGFSRDI
                     QDYGGYFQLHNKPGNLGVWSFSLGAVGSYSSVATNREFGFAQATVSTPVISLFALQEL
                     DYYRPWKVRQGEDKFSLTSTYVNGSLRPSRWLAFNGGYDSRRSVRLFRDAVDPATQFD
                     DTYRRGVNGGISLMGNRVRASADWRRSDGGGNGTATAWTGTAGLDRFTPLHLSLTGRA
                     TWYSNPALDGRLYSGRLGFDPLTPLHIEFNGGVRNEDLAPTELQPATTHHKVTWIGAD
                     LDWSLARGWFLSLSATREKGEAATTQFYGSMTWRF"
     gene            2925..3296
                     /locus_tag="VLD58_08570"
     CDS             2925..3296
                     /locus_tag="VLD58_08570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54396.1"
                     /translation="MSDESSTLRARLGWIASVFHPERKIATATLAAIKQVLMGRRSIS
                     AINLQANSDTLAINLADVPELGEVGGIARVTVETGEEVGIARVGRTSFVGYRLEADVL
                     KEIDLQLDEAAGKLKIVGAEA"
     gene            complement(3298..4776)
                     /gene="glpK"
                     /locus_tag="VLD58_08575"
     CDS             complement(3298..4776)
                     /gene="glpK"
                     /locus_tag="VLD58_08575"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004370 - glycerol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HSB54397.1"
                     /translation="MTCILALDEGTTGSTALMIHQDGSIRGRGYREFTQYFPRPGWVE
                     HDPEEIFRVTLEAAREAVAAAGVRPVGIGITNQRETVVLWDRRTLAPVCRAIVWQDRR
                     TAERCRQLKAEGLEASVRAQTGLVLDPYFSATKIEWLLQNPDLRRRAEKGELAFGTVD
                     SWLVAKLTGGRCHVSDHTNASRTLLYDLGTRDWSESLLQLFGVPRPILPAIVRSAGVV
                     GETEAGLFGKPVPIAGIAGDQQAALFGQGCVTPGLAKNTYGTGAFLLACTGQERPSSR
                     NGLLLTAACGPSGEPAYALEGSVFIAGAAVQWLRDGIGIVQKAGETEAMARSVPDTGG
                     VYFVPAFVGLGSPHWEAEARGTIVGITRGTTRAHLVRAALEAMAYSSADLLSGMVSDA
                     SLNLATLRVDGGATSNDWLMQFQADVLGVPVERPDNVETTALGAGGLAGIALGVWPSV
                     EGFLAARKFRRFDPVMDPRERERHWGGWRRAVDATLAWARSR"
     gene            complement(4816..5244)
                     /locus_tag="VLD58_08580"
     CDS             complement(4816..5244)
                     /locus_tag="VLD58_08580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54398.1"
                     /translation="MIHSIRWRLLLAGLLLIPGPAAAQQALSHIPFCSADSAANAFVD
                     QVRFRVAGLDSASRARQREVGLAPAAPDEVILVVDDSVCLAASAAYSRESPGANRVPA
                     PFPVAVVRSGDRLLVRLPGERRTLVFDATLRRLGAFGTSP"
     gene            complement(5271..5642)
                     /locus_tag="VLD58_08585"
     CDS             complement(5271..5642)
                     /locus_tag="VLD58_08585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54399.1"
                     /translation="MWRPLRFFRRLAVPALTLALLNGLMFLLTEQYAALRPLREPFDL
                     LSAGLSGVWAARSRLGRPWRVELTAGATAGLIVGVIRVLLGYYVAGLPASTELLLLGR
                     SVIAGGIGALVSRLLNQRVVL"
     gene            5737..6483
                     /locus_tag="VLD58_08590"
     CDS             5737..6483
                     /locus_tag="VLD58_08590"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSB54400.1"
                     /translation="MTFHDHFSDRATAYARFRPTYPPELFAWLSRVSPGRALAWDAGT
                     GSGQAARGLAQHFTRVVATDPSTAQLEEAEPHPAIQYRRGVEGESGLEPATADLVTAA
                     QALHWFDLEAFYREVARVMRPGGLLAVWCYGLHRVTPEIDRVFDRFYGETVGPWWPKE
                     RAEVESGYRSLPFPYPEITVPPFDMEANLDMAGLLAYVGTWSAVRRKIAATGEDPIVA
                     LAQELPASWGDPSATRTVRWPLSVRAGYSG"
     gene            complement(6461..7495)
                     /gene="mtnA"
                     /locus_tag="VLD58_08595"
     CDS             complement(6461..7495)
                     /gene="mtnA"
                     /locus_tag="VLD58_08595"
                     /EC_number="5.3.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF004326.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046523 -
                     S-methyl-5-thioribose-1-phosphate isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="HSB54401.1"
                     /translation="MIPEPISWGADQQVRILDQTLLPLEERYLDLATVDAMAEAIRML
                     RVRGAPLIGISAAMGVTLALRNGSGGAGPAALKTALEACDLLQSTRPTAVNLFWALNR
                     MRERARASAGQDLYAALREEATAIWDEDRAMCDRIGQAGMGLIPDGGTVLTHCNAGVL
                     ATGGIGTALAPIYCAHRSGKKVSVVADETRPLLQGSRLTAWELTRAGVPTTVIADNMA
                     ASRLRRGGIACVIVGADRIARNGDVANKIGTYSVALAARHHGVPFYVAAPRSTFDFET
                     PDGAAIPIEERVQTEVRQAGGSVIAAPAAQVWNPAFDVTPAELVTGYITDAGLLTAKE
                     IGTLNPNSRP"
     gene            complement(7492..8745)
                     /locus_tag="VLD58_08600"
     CDS             complement(7492..8745)
                     /locus_tag="VLD58_08600"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSB54402.1"
                     /translation="MRPNRLWGAAAMLLPALLTAQTTTAVTARRMLDLRSGRMIDNPV
                     VVIQDGRITAVGSTAPAGVTPINLGDVTLLPGFMDLHTHLTMSIDGNWAVREVFETPA
                     DAALRGAANARKTLLAGFTTVRDVGAMGGADVSLMRAIDAGRVPGPRIIPSREAIGIT
                     GGHCDITGYAPGILEGGGGVADGPDAVVKAVRYQIKYGAKVIKVCATAGVLSNEGPVG
                     AQQLSDEELKAIVDEARRHGLKVAAHAHGAEGILAAVRAGVSSIEHGSMINDQAIALM
                     KQKGVYLVPTTYLADRIDLSALPPNIRAKAESLLPLAKDNLRHAIRAGVKIAFGTDAA
                     VYPHGENAHEFGALVDRGMTPLEALRTATLNAADLLGVDDRGEIAPGKLADMVAVPGN
                     PLEDIHVTERVTWVMKGGAVVSSNP"
     gene            complement(8805..10121)
                     /locus_tag="VLD58_08605"
     CDS             complement(8805..10121)
                     /locus_tag="VLD58_08605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54403.1"
                     /translation="MRPLLLTGSLLLLSTFPASAQQADSAVPVASAALFAPGTLTRRV
                     ASSLNRAQQYAVYLPSGYRPDRNWPVLLLLDPRGRALVPMRLAQASAERHGYVVLSSW
                     NTLSDWDNQPNIDAMSAMLTDLQRIFAADRSRLYLVGFSGTARFAWEEGSALRGTVAG
                     VLGFGAGVPPGFQFTPPGTTGPLPFDYFGGAGTLDFNYEELLTLDQELDRQRIAHRIR
                     FYDGPHSWPPEKVMAEGIDWIELRAMGRGLAPVDRAWVDSLFAQSMERAGAVAQAGDS
                     VGALREYRSIAADFSGLHDVTLAAARSDALARSKAVKNALKAQVAMIQRNREYLERLV
                     TFLRRFRSGTPPSVASSLKSLDIARLRREQESRQDTAAAFAAGRLLAHVQAAVGFYEP
                     RDYLVEGDSARALALLELAQAVHPNSGRSAAAAFRDLVSEIERRTP"
     gene            complement(10194..>10702)
                     /locus_tag="VLD58_08610"
     CDS             complement(10194..>10702)
                     /locus_tag="VLD58_08610"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSB54404.1"
                     /translation="RSEHNLGLVERELGNLDGAAEHAARAVNAASRAGDDALLGLVLH
                     GQAETALRRGESEHARQLLAAARAVAERSDDALGLAEAARLEAMLAYAAGRYTAALNG
                     AATAYQAAVRLGARYLAGECALLAAQACNRLSRRRVSDRFRRRAESLFREVGASTALR
                     RVEMTLAR"
BASE COUNT         1762 a         3766 c         3594 g         1580 t
ORIGIN      
        1 cgttcaatca tggcaagctg ggcttcccgc tggcgggcgc ccacagctcg gccgcgtgcc
       61 gcgcctgcca ccagtcgctc gacttcaagg gcaccaccag gacctgcgcg tcgtgccaca
      121 ccgacgtgca ccggggggag ctgggcgcgg actgcgccaa gtgccacacc ccgcggagct
      181 tcctcgaccg ttccacgatg acgcgggccc accagctgac ccgcttcccg ctcgagggcg
      241 cccacctggc cgcggactgc accagctgtc acgcgccggc agcgcagggc ggccagcagt
      301 tcgtcgcgcg ccagaccacc tgcgtctcct gtcaccaggc cgacttcgcc tcggcgaaag
      361 accccgatca cagtgcgggg ggctttcccc gggaatgcgc cagctgtcac gcggtgacgg
      421 tctggtcccg ggcccgcttc gaccacagcg ccagccgctt cgcgctgacc ggcgcgcacc
      481 gcgccgtgac ctgctcccag tgccacgtca acaaccagtt caccggaacc cggaccgact
      541 gcgtcggctg ccaccagaac gactacaacg gcgcggccca gcccagtcac acccaggcgc
      601 agctccccac cgactgcgtg ctctgccatt ccaccacctc gtggaatgcc aactacgatc
      661 actcgcgcac ccagttcccg ctcaccgggg cccatcgcgc ggtgaactgc atggactgcc
      721 atagcgacaa cgtctaccgg ggcaagccga ccgactgcgt gagctgccat ctgcccgact
      781 acaacggcgc cgctgaccca aatcacaaga cggcgcagtt ccccacgacc tgcgtgccct
      841 gtcacagcac caccgcgtgg cagccggcgt cgttcgatca caacgcgagt tcgttccccc
      901 tgaccggctc gcacaaggcg gtggcatgcg ccgactgcca ctcggacggg gtctacaacg
      961 gcaagccgac cacctgccag tcgtgccacc tgggcgactt caaccgcgcc acgtcaccca
     1021 accacgccca gttggggtgg ccgcagacct gcatcacctg tcacgccggc tccaccaaca
     1081 cggtggcgtg ggactccggg gtcacactgc cctcgcagta tcacaccatg ttcagcgtca
     1141 atcacgaagg cgcccggggc gactgcaccc agtgccacct gacgacgaac tacagccagt
     1201 ccacgtgcag cacgcaccac catccaccga gctgcaccta cctcaaccgg agcacatgcg
     1261 gtggctgagg agcagagcat gagaacccga cacccgctgg cgtggggagc ggccgcgatc
     1321 gtgcttctcg ctaccccggc ggtcctggca ggccaggatt ccacggccgc acggacggcg
     1381 gcagccacat ccgccgccga cagcgcggtc cgcaccgccc cggtgaccta tgtcgccggg
     1441 agcaccatct acgtcgccgc cggccgcgcc gatgggctgg tggagggaca gcaactgttc
     1501 atcaagcggc agaacggcac cagcgtgacc ctcaaggtcg cgttcctctc gtcccgccag
     1561 gcctcgtgcg aagtggtggg cgaagcagcg agtgtggtgg tgggggaaca ggtcaccttc
     1621 accccaaagg cggcctcgag cgcggccaag ggctcgacgg ccgttgccgc ccgccgtccc
     1681 tcccggcacc ggcttaacgg ccccgggctc cacggccggg tcggggcgcg ctacctggtg
     1741 gccaaggagg aaacgctcaa cggcgggttc agccagccct cgttcgacct gcggctcgac
     1801 ggcagccagc tgggcgggac gccgctgggc ctgaacgccg acctccgcac ccgccgcacc
     1861 accagcaccg ccagcgatgg ctccagcacc gtggacggcc gcacccgggt gtaccaggcg
     1921 gccctgctct ggaatacacc gggggccgga ttccgcatgg cgctgggccg gcagtatctc
     1981 accgccgtga cttcggtaac gctcttcgac ggtgccctgc tcgagctgaa cagctcccat
     2041 ttcggcttcg gggccttcgg gggggtggag cctgaaccgg ccaacctggg gttctcacgg
     2101 gatattcagg attacggcgg atatttccag ctgcacaaca agcccgggaa cctgggagtc
     2161 tggtccttct ccctgggggc ggtggggtcg tacagcagcg tggccaccaa ccgggagttc
     2221 gggtttgccc aggccacggt cagcacgcct gtgatctcgc tcttcgcgct ccaggagctg
     2281 gattactacc gtccttggaa ggtgaggcag ggagaggaca agttctccct tacgagcacc
     2341 tacgtgaacg gctcgctccg gccctcgcgc tggctggcgt tcaacggggg ctacgacagc
     2401 cgccgcagcg tccgcctctt ccgcgacgcg gtcgacccgg ccacccagtt tgacgatacc
     2461 tatcgccgcg gcgtcaacgg cggtatctcg ctgatgggaa accgggtccg ggcttcggcc
     2521 gactggcgcc ggtcggacgg gggcgggaac ggcaccgcga cggcctggac cggcaccgcc
     2581 ggcctcgacc gcttcacccc gctccatctg agcctcaccg ggcgggcgac ctggtactcc
     2641 aacccggccc tggatgggcg gctctactcc ggacggctgg gattcgatcc gctgaccccg
     2701 ctccatatcg agttcaacgg cggggtgcgc aacgaggatc tggcgccgac cgaactgcag
     2761 ccggcgacca ctcaccacaa ggtgacctgg atcggggctg atctcgactg gagtctggcc
     2821 cgggggtggt tcctctcgct gtcggccacc cgtgaaaaag gcgaagcggc aactacccaa
     2881 ttctacggca gcatgacctg gcggttctaa ctggggaggg tccgatgagt gacgaaagca
     2941 gtaccctgcg cgcccggctg ggctggatcg cctcggtgtt tcaccccgag cggaagattg
     3001 ccacggccac actcgccgcc atcaaacagg tgcttatggg ccgccggtcc atctcggcca
     3061 tcaacctgca ggccaacagt gacaccctgg ccatcaacct cgccgatgtt cccgagcttg
     3121 gtgaggtggg cgggattgcc cgggtgacgg tcgaaaccgg cgaagaggtg ggaatcgcgc
     3181 gggtgggacg gaccagcttc gtgggctacc gtctcgaggc cgacgtgctc aaggaaatcg
     3241 acctccagct cgacgaagcc gccggcaagc tcaagatcgt cggcgccgag gcctgagtca
     3301 gcgcgagcgg gcccaggcca gggtggcatc cacggctcgg cgccacccgc cccagtgccg
     3361 ttcccgttcg cgcggatcca tgaccgggtc gaagcgccgg aacttcctcg ccgccaggaa
     3421 cccttccacc gacggccaca caccgagcgc tatgccggcg agcccgcctg cgcccagcgc
     3481 ggtggtctcc acattgtccg gccgctccac cggcaccccc agcacatcgg cctgaaactg
     3541 catcagccag tcgttggaag ttgctccccc gtccacccgc agggtggcca ggttgagcga
     3601 cgcatccgag accatcccgc tcaggaggtc ggcgctggag taggccatcg cttcgagcgc
     3661 cgcccgcacc aggtgggccc gggtcgtgcc acgggtgatg ccgacaatcg ttccgcgggc
     3721 ctccgcctcc cagtggggtg accccagccc cacgaacgcc gggacgaagt agaccccacc
     3781 cgtgtcaggc acgctcctgg ccattgcctc ggtctccccc gccttctgga cgatcccgat
     3841 cccatcccga agccactgca ccgcggcgcc ggcgatgaac acgcttccct cgagcgcata
     3901 ggccggctcc cctgaggggc cacaggctgc ggtgagcaat agtccgttac gggacgaggg
     3961 acgttcctgt ccggtgcagg caaggagaaa ggcgccggtg ccgtaggtgt tcttggccag
     4021 gcccggcgtc acacacccct gcccgaagag cgcggcctgc tggtcgccgg cgatcccggc
     4081 aatgggaacc ggcttcccga agaggccggc ctcggtctcg ccgacgacgc ccgccgaccg
     4141 gacgatggcc gggagaatgg ggcgcggcac accgaagagc tgaagcagcg actcgctcca
     4201 atcccgggta ccgagatcat agagcagggt ccgcgaggca ttggtgtggt cgctgacatg
     4261 gcaccggcca cccgtcagct tcgcgacaag ccagctgtct accgtgccaa aggcgagctc
     4321 ccccttctcc gcccgccggc ggaggtcagg gttctgcagc agccactcga tcttggtggc
     4381 ggagaaatag ggatcgagca ccaggccggt ttgggcccgg acactggcct ccaggccttc
     4441 ggccttgagc tggcggcagc gctccgcggt gcggcggtcc tgccagacga tggcccggca
     4501 gaccggcgcc agagtccggc ggtcccagag gaccacggtc tcgcgctggt tggtgatacc
     4561 aatgcccacc ggtcggacgc ccgcggcggc cactgcctcg cgcgcggcct cgagcgtcac
     4621 ccggaaaatc tcctcggggt cgtgctcgac ccagccgggt cggggaaagt actgggtgaa
     4681 ctcgcgatac ccgcggccgc ggatgctgcc gtcctgatga atcatcaggg cggtcgagcc
     4741 ggtcgtcccc tcatcgaggg cgagaataca ggtcatgcgg gctccggcgc tcttctctat
     4801 atatggaatg gaacttcagg ggctggtgcc gaacgcccca agacgtcgaa gtgtagcgtc
     4861 gaagacgagg gtgcgccgtt cgccgggcag cctcacgagc aggcggtcgc ccgagcggac
     4921 caccgcgacc ggaaacggcg cgggcacccg attggcgccg ggcgattccc gggaatacgc
     4981 ggccgaggcg gccagacaga cgctgtcatc caccaccagg atgacctcat cgggagctgc
     5041 cggagcgagc ccgacttcgc gctgccgcgc ccggctggcg gaatccagac cggcaacccg
     5101 gaagcggacc tggtcgacaa aggcgttggc cgcgctgtcg gcgctgcaga aagggatatg
     5161 gctcagtgcc tgctgcgccg ccgcaggccc cggaatgagg aggagaccgg cgaggagcag
     5221 gcgccagcgg atggagtgga tcatgacgat ccaaatctag agcgatggag ctagagaacc
     5281 actcgctggt tcagcaggcg ggagaccagg gctccaattc ccccggcaat gacggaccgg
     5341 ccgaggagca ggagctcggt gctggctggg agtccagcaa cgtagtagcc cagcagcacc
     5401 cggatcacac cgacaataag gccggcagtc gcgccggcgg tcagctcgac gcgccacggg
     5461 cgccccagcc ggctccgggc ggcccagacg cctgacaggc cggccgacag caggtcgaag
     5521 ggctcgcgca gcggacggag tgccgcatac tgttcagtca gcaggaacat cagaccgttc
     5581 agcaacgcga gggtgagcgc ggggacggcg agacggcgga agaaccggag cggacgccac
     5641 atcggagcaa ccggaagaac gtagaaagtg cgacatgctg gagcgagcgt gagagtacga
     5701 ctccccctta agtgtcgtct atgatctgga tcacccatga ccttccatga tcacttctcc
     5761 gatcgcgcga ccgcctatgc gcgcttccgg ccgacctatc cgccggaact cttcgcgtgg
     5821 ctctcgcggg taagcccggg tcgggcgctg gcgtgggatg ccgggaccgg ctccggtcag
     5881 gccgcgcgag ggctggccca gcacttcacc cgggtcgtcg caaccgatcc cagtactgcg
     5941 cagctcgagg aggcggagcc tcatccggca atccagtacc gccggggagt ggagggagaa
     6001 tccggactgg agccggccac cgcggacctg gtgaccgcgg cgcaggcgct gcactggttc
     6061 gacctggagg cgttctaccg ggaagtggct cgggtgatgc ggcctggagg actgctggcg
     6121 gtctggtgct atgggctcca ccgggtgacc ccggaaatcg accgggtgtt cgaccggttc
     6181 tacggggaga cggtcggacc ctggtggccc aaggagcggg ccgaggtgga gagcggctac
     6241 cgcagcctgc ccttccctta tcccgagatc acggtgccgc ccttcgacat ggaggccaac
     6301 ctcgacatgg ctggcctgct ggcgtacgtc ggcacctggt cagcggttcg gcggaagatc
     6361 gccgccaccg gggaggaccc gatcgtggcg ctggcccagg agcttccggc ctcgtggggc
     6421 gacccctccg ccacccgtac cgtgcgctgg cccctctcgg tcagggccgg ctattcgggt
     6481 tgagggtccc gatctccttt gccgtgagga gacccgcgtc ggtgatgtac ccggtgacaa
     6541 gctcggccgg ggtgacatca aaggccggat tccagacctg cgctgccggg gcggcaatga
     6601 cgctccctcc cgcctgacgc acctccgtct gcacccgctc ttcgatcgga atcgcggcgc
     6661 catcgggcgt ctcgaaatcg aaggtggaac ggggcgctgc cacgtagaac ggcactccgt
     6721 ggtgccgggc cgcaagcgcc accgagtagg tgccgatctt gttcgccacg tccccattcc
     6781 gcgcgatccg gtcggccccc acgatgacgc aggcaatccc gcctcggcgg aggcggctcg
     6841 cggccatgtt gtcggcgatg accgtcgtcg gtaccccggc gcgggtcagt tcccacgcag
     6901 tcagacggct tccctgcagt agcggccggg tctcgtcggc caccacgctc accttcttcc
     6961 cggaacggtg agcgcagtag atcggcgcga gcgcggtccc gatgccgcca gtcgccagca
     7021 caccggcatt gcagtgggtc aggacggtgc cgccgtcagg gatcagcccc atcccggcct
     7081 ggccgatccg gtcgcacatc gcccggtcct catcccagat ggcggtggcc tcttcgcgga
     7141 gcgccgcgta gagatcctgg ccggccgacg cccgggcccg ctcccgcatc cggttgaggg
     7201 cccagaagag gttcacagcg gtgggccggg tggattgcag gaggtcgcag gcctcgagcg
     7261 cggtcttgag cgcagccggc cccgcacccc cactgccgtt ccggagggcg agggtcacgc
     7321 ccatcgcggc cgagatcccg atgagcggcg ccccccggac ccggagcata cggatcgctt
     7381 cggccattgc atcgaccgtg gcgaggtcga ggtagcgctc ttccagcggc agcagggtct
     7441 ggtcgagaat ccggacctgc tggtccgctc cccacgagat cggttcggga atcatggatt
     7501 cgaagatacc actgccccgc ccttcatgac ccaggtcacc cgctcggtaa cgtgaatatc
     7561 ctcgagcgga ttgcccggta ccgcgaccat atcggccagc ttgccgggcg caatctctcc
     7621 ccggtcgtcc acgcccaaca ggtctgcggc gttgagggtg gcagtgcgga gcgcttccag
     7681 cggcgtcatc ccgcgatcga ccagcgcccc gaattcatgg gcgttctcgc cgtgcggata
     7741 caccgctgcg tcggtgccaa aggcgatctt cacaccggca cggatcgcgt ggcggaggtt
     7801 gtccttcgcc agcgggagca gcgattcggc cttggcccgg atgttgggcg ggagggccga
     7861 caggtcgatg cgatcggcca ggtaggtggt gggcaccagg tagacaccct tctgcttcat
     7921 cagggcgata gcctggtcgt tgatcatcga gccatgctcg atcgatgaca cgccggcccg
     7981 caccgccgcg agtatccctt cggccccatg ggcgtgagcc gcgaccttga gcccatgccg
     8041 gcgggcctcg tcgacgatgg ccttcaattc ctcgtcggag agctgctgcg ctcccaccgg
     8101 cccctcgttg gagagcaccc cggcggtcgc gcagaccttg atgaccttgg cgccgtactt
     8161 gatctggtag cgcaccgcct tcaccaccgc gtcggggcca tcggccaccc cgccgccgcc
     8221 ctcgagtatc cccggtgcat agcccgtgat gtcgcaatgg ccgccggtga tgccgatcgc
     8281 ttcgcgcgaa ggaatgatcc gggggccagg gaccctgccg gcatcgatcg cgcgcatcag
     8341 gctcacgtcc gctcccccca tcgctcccac atcccgcacg gtcgtgaagc cggccagcag
     8401 cgtcttgcgc gcgttggcgg cgccacgaag ggcggcgtcg gccggcgtct cgaagacctc
     8461 ccggacggcc cagttgccgt cgatggacat cgtcagatgg gtatggaggt ccatgaaccc
     8521 gggcaggagt gtcacgtcgc ccaggttgat cggggtgaca cccgcgggcg ccgtgctccc
     8581 caccgcggtg atgcgcccgt cctgtatcac caccaccgga ttgtcgatca tgcggccgct
     8641 gcggaggtcg agcatccggc gcgccgtaac cgcggtggtg gtctgggccg tgagcagcgc
     8701 cgggaggagc atcgcggctg cgccccagag tcggttcggt ctcattgaag ccttgggaaa
     8761 tgggagcggc aaagatgcag ggtgagggct cccggcgcga gaggtcaggg cgtgcgccgc
     8821 tcgatctcgg agaccaggtc gcggaaggct gcggccgcgc tccgtcctga attgggatga
     8881 accgcctggg ccagttccag cagcgcgagg gccctggccg agtcaccctc gacgagataa
     8941 tcccgcggct cgtagaagcc gaccgcggcc tgcacgtgtg ccagcaaccg tccggctgca
     9001 aacgccgccg ccgtgtcctg ccggctctcc tgttcccgcc ggaggcgcgc gatgtcgagg
     9061 ctcttgaggc tgctcgcgac cgatggcgga gtgccggagc ggaaccgccg cagaaaggtc
     9121 accagccgct cgaggtattc ccggttacgc tggatcatcg cgacctgcgc cttgagcgca
     9181 ttcttcacgg ccttcgaccg tgccagcgca tcgcttcgcg ccgcggcgag ggtgacatcg
     9241 tggagaccgc tgaaatcggc cgcgatcgaa cgatactcgc gcagagcgcc cacgctgtcg
     9301 ccggcctgcg ccactgcccc tgcacgctcc atcgactgtg cgaagaggga atccacccag
     9361 gcgcggtcca ccggggccaa cccccgcccc atcgcgcgca gctcgatcca gtcgatcccc
     9421 tcggccatga ccttctccgg gggccaggag tgcgggccat cgtagaaccg gatgcggtga
     9481 gcgatccgct ggcggtcgag ctcctggtcg agagtaagca gttcttcgta gttgaagtcg
     9541 agcgtcccgg cgccgccgaa gtaatcgaaa ggaagcgggc cggtggtccc cggcggggtg
     9601 aactgaaagc cgggcggcac gccggcgccg aagccgagca caccggcaac ggtgccgcgg
     9661 agagcgcttc cctcttccca cgcgaagcgg gcggtgccgg agaagcccac cagatagagg
     9721 cgggagcggt cggccgcgaa gatccgttgg aggtcggtga gcatcgccga catcgcgtcg
     9781 atgttgggct ggttgtccca gtcgctcagc gtattccagg agctcagcac cacgtaccca
     9841 tggcgctccg ccgatgcctg ggccagacgc atggggacga gcgcccgccc gcgaggatcg
     9901 agcagcagca agaccggcca attgcggtcg gggcgataac ccgaggggag atacacggcg
     9961 tactgctggg cccgattgag cgaactggcc acccgccgcg tcagcgtccc cggagcgaac
    10021 agtgccgcgg atgccaccgg cactgcgctg tcagcctgct gggcacttgc gggaaaagtg
    10081 gagaggagga gcagcgaacc agtcaggagc agcgggcgca tcagggatcc gggaggggga
    10141 gagccgcgcg tgtatgctct agacgtcttc cccgccaccg acctgcacgg ttcctaccgg
    10201 gccagggtca tctccacccg ccgaagcgcc gtcgaggcgc ccacctcccg gaagagcgac
    10261 tcggcccgcc gccggaagcg gtcggacact cgccgtcggg acagcctgtt gcacgcctgc
    10321 gcggcaagga gcgcgcactc gccggcgagg tagcgggctc ccagccggac cgcggcctgg
    10381 taggcggtcg ccgctccatt gagggcggcg gtgtagcgtc cggcggcata ggcgagcatg
    10441 gcctcgagac gggccgcttc ggccagcccc agggcgtcat cgcttcgttc ggccaccgcg
    10501 cgcgcggccg cgagaagctg acgggcgtgt tcgctctctc cccgcctgag cgcagtctcc
    10561 gcttgaccat gcaacacgag gccgagcagg gcatcgtccc cagcacggct tgccgcgttc
    10621 actgccctgg cggcgtgctc cgcggccccg tcgagattgc cgagttcccg ctccaccagg
    10681 ccgaggttgt gctccgagcg gg
//
LOCUS       DATIFF010000575         1645 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1919597, whole genome shotgun sequence.
ACCESSION   DATIFF010000575 DATIFF010000000
VERSION     DATIFF010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1919597"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..767)
                     /locus_tag="VLD58_08615"
     CDS             complement(<1..767)
                     /locus_tag="VLD58_08615"
                     /inference="COORDINATES: protein motif:HMM:NF014344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase family protein"
                     /protein_id="HSB54405.1"
                     /translation="MPVEVTSEIAPLDTVLVHTPGPELEAVTPGNRADFLYDDIIDLE
                     IAQREHRQFVSVVRRFARVLQVRELLAEILAQPPARDFLVTKTMDVVPSDDLAQQLGT
                     MPPEQIVEMLIQGTREPSGPLAAALNEEGFAFPPLPNLFFPRDIGMVIGKHVVVGSMR
                     YGVRWTEELLIKALFLFHPELANAGLLYDGSEERRSNYTLEGGDVHYLRPDLLVLGFS
                     ERTSPAALDQLCDTLFARELVTDVIVVVMPKAPTAIHL"
     gene            complement(809..1429)
                     /locus_tag="VLD58_08620"
     CDS             complement(809..1429)
                     /locus_tag="VLD58_08620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA];
                     GO_process: GO:0051775 - response to redox state [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensing transcriptional repressor Rex"
                     /protein_id="HSB54406.1"
                     /translation="MRKVAESTVRRLSLYLRFLEEFEGQGVATISSGALASRGGTTSA
                     QVRKDLSFFGSFGKRGLGYPVPELADRLREILGLKRRYRVALIGAGKIGSALVQYRGF
                     RQRGFDIVAIFDSDPAKIGRQWNGLTVLGVDALEQELGRQPIDMAVLVTPAEAAQPVT
                     DRLLALGVKAILNFAPVQLAVPDDVVVKTVNLALELETLSYALASR"
     gene            complement(1462..>1645)
                     /locus_tag="VLD58_08625"
     CDS             complement(1462..>1645)
                     /locus_tag="VLD58_08625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54407.1"
                     /translation="AYRRKQLARGLRELTGWPAERVEAVLAGLGIDPHARPETLPPAG
                     FVGLLHALVDGGWAPK"
BASE COUNT          263 a          589 c          562 g          231 t
ORIGIN      
        1 aggtggatgg cggtcggggc cttgggcatc accaccacga tgacatcggt gaccagctcg
       61 cgggcgaaga gggtgtcgca gagctggtcc agcgccgccg gcgaggtccg ctcgctgaag
      121 cccagcacca gaagatcggg ccggagatag tggacgtcgc cgccctcgag ggtgtagttg
      181 ctccgccgct cttccgagcc gtcgtagagc aggccggcgt tggccagctc ggggtggaac
      241 aggaacagcg ccttgatcag cagctcctcg gtccaccgca ccccgtagcg cattgagccc
      301 accacgacgt gcttcccgat caccatcccg atgtcgcggg ggaagaagag attggggagg
      361 ggtggaaagg cgaacccctc ctcgttcagc gccgccgcca gcgggccgct cggctcccgg
      421 gtgccctgga tcagcatctc gacgatctgc tccggcggca tggtcccgag ctgctgggcc
      481 aggtcgtcgg acggcaccac gtccatcgtc ttggtcacca ggaagtcgcg cgccgggggc
      541 tgggccagga tctcggccag cagctcccgc acctggagca cccgggcgaa gcggcggacc
      601 accgagacga actggcggtg ctcccgctgg gcgatctcca ggtcgatgat gtcgtcgtag
      661 aggaagtccg cccggttccc cggcgtcacc gcttccagct cggggccggg ggtgtgcacc
      721 agaacggtgt cgagcggagc gatctcggaa gtgacttcga cgggcatggg gcaaggtaag
      781 gcgggacggc ggtacggcgg tagggccgct accggctcgc caaggcgtag ctgagggtct
      841 cgagctccag ggccaggttc accgtcttca ccaccacgtc gtccggcacc gcgagctgca
      901 ccggggcgaa gttgaggatc gccttcaccc ccagcgccag cagccggtcg gtcaccggct
      961 gggccgcctc cgccggggtc accagcaccg ccatgtcgat cggctggcgg ccgagctcct
     1021 gctccagcgc gtcgacgccc agcacggtaa gcccgttcca ctgccgcccg atcttggccg
     1081 ggtcgctgtc gaagatggcc acgatgtcga acccgcgctg gcggaagccg cggtattgca
     1141 ccagcgcgct gccgatcttc cccgccccga tcagcgccac ccggtagcgc cgcttgaggc
     1201 ccaggatctc ccggagccga tcggccagct cgggcaccgg gtacccgagg ccccgcttcc
     1261 cgaacgagcc gaagaacgag agatccttcc ggacctgcgc cgaggtggtg cccccccgcg
     1321 aggcgagcgc gccggagctg atcgtcgcca cgccctgacc ctcgaactct tcgaggaagc
     1381 gcaggtacag cgagagccgc cggaccgtcg attcggcgac cttacgcatg gcaccccgag
     1441 ttgtgaaaca tttcacaaaa cctacttggg tgcccacccc ccgtcaacga gcgcgtggag
     1501 cagcccgacg aacccggccg gcgggagggt ctccggccgg gcatgcgggt cgatccccag
     1561 ccccgccagc accgcctcga cccgctcggc cggccacccg gtgagctccc ggagtccccg
     1621 cgccagctgc ttccgccggt aagcg
//
LOCUS       DATIFF010000576         5031 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_73881, whole genome shotgun sequence.
ACCESSION   DATIFF010000576 DATIFF010000000
VERSION     DATIFF010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5031
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73881"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..819)
                     /locus_tag="VLD58_08630"
     CDS             complement(<1..819)
                     /locus_tag="VLD58_08630"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HSB54408.1"
                     /translation="MSFARWRANGREAVVVGLGKSGTAAALLLRREGLRVYASDAAKD
                     LGKLLGAEAPVLLRRMQEAGVEVQVGGHDLVRIGRAGVCVISPGVPPTAPPLMAARDA
                     GVPVVSELDVGYAALPGVRFAVITGTNGKTTTTALTGHLLETAGFKAVTAGNIGTPLA
                     QLALEGKRPEWVALEASSFQLHDTFDLVPAIGAMTNLAPDHLDRYSSLEEYYADKDRL
                     YRNANITSCWVLNGDDPEVERRAEGRKGDRLRFRIGTRADGWYDRATRQLKLGDA"
     gene            complement(816..1943)
                     /gene="mraY"
                     /locus_tag="VLD58_08635"
     CDS             complement(816..1943)
                     /gene="mraY"
                     /locus_tag="VLD58_08635"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HSB54409.1"
                     /translation="MLYHLLAPLGKHFILFNLLNYISFRAAGATVTAILIAFLIGPPI
                     IARLRARKIGQVIRAEGPASHQGKRGTPTMGGVIILLSCIISALLWGQVANRYLLFAV
                     LATLWMGGIGFLDDYLKIVEGKSRGLVAKWKLAGQVSFGVVLGTLLLYFPVVPSDTIP
                     ASATTVPFFKFVIVTFWPWIYVAFVTTVITGSSNAVNLTDGLDGLAAGLSAIAAGAFA
                     LFGYILGRVDATAYLNLFYLPGAGELSIFCGAMLGGCIGFLWFNAHPAQVFMGDTGSL
                     ALGGAFGTVAILLKAEFLLLIVGGVFAAEAVSVMLQTGVYKWHKRSRGKEYADAHRVF
                     RMAPLHHHFEKLGWHESTVVTRFYILGIFCAMLALATLKLR"
     gene            complement(1950..3299)
                     /gene="murF"
                     /locus_tag="VLD58_08640"
     CDS             complement(1950..3299)
                     /gene="murF"
                     /locus_tag="VLD58_08640"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR01143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HSB54410.1"
                     /translation="MRWTDATVRAALGLPGGDETPYAAISTDTRTLEPGSLFVALRGD
                     RFDGHDHLAKAAEAGATGALVRVGTPDVQGLRLYHVADTLAGYGLLARARRREIQGPV
                     VAIGGANGKTSTKEMCAAVLRTRYRVHSTPANDNNLVGIPKTILAAPEDTEALVIEAG
                     ASVRGELARARPVIEPTVTVTTNVAVSHLDGFGSLEGVLEEELDLIDGVELAIVGTDP
                     PQLAEGARRRAKRVITAGLARADRVPVSVTIDSTGKPTLAVENARILLPLLGQHQASN
                     AMLAWTLAQELKLDLTAAAEALRTLRIPGGRGELIEAGGLTIINDSYNANPSSFLAAI
                     ATARTMRAGRKLVFVAGTMRELGTEAARHHAAVAAALVGLEPDVLAAVGEFVPALARY
                     SEKLKGRLISAPDATSMGPLLKARLQGDELIVLKASRGAALERILPFLTGQDHTPTH"
     gene            complement(3286..4752)
                     /locus_tag="VLD58_08645"
     CDS             complement(3286..4752)
                     /locus_tag="VLD58_08645"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: protein motif:HMM:NF001126.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HSB54411.1"
                     /translation="MTARPFAQLLDALRRDGLLESAPAALPPVTGVTADSREVKPGMA
                     YIAVRGSQADGHQFVADAAKKGAAVVVVERGDGAGVPAVLVRDGRLAALTLGRTWHGD
                     PGRKLTLIGVTGTNGKTTTTALVRHLFNEHGTAGSIGTLGAFDGAGQPVASTAGSLTT
                     PGPIDLQATLAALVSRGVTHVVMETSSHSLDQGRLDGLTYAAGIFTNLTRDHLDYHGT
                     MESYLAAKLRLDSLLGIDGVQVVNVDDPAWEALPARHRRITWGFGPTAMVRAVEPQLG
                     NAGSSFLLTTPHGNVPIALPLLGEFNISNALAAAAAGLALGKSLAHVAKRLNLAPQVP
                     GRMERIVERPSVVLRDYAHTPDALERALQSLRPVTTGRLIVVFGCGGERDRGKRPVMG
                     RIAAELADLAIVTSDNPRRESPDFIIDEVEQGMGSTPHQRFTDRREAIAAALKAARAE
                     DTVLLAGKGHETYQVIGTEKVPFDEARIVRELLGHALD"
     gene            complement(4749..>5031)
                     /locus_tag="VLD58_08650"
     CDS             complement(4749..>5031)
                     /locus_tag="VLD58_08650"
                     /inference="COORDINATES: protein motif:HMM:NF015734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HSB54412.1"
                     /translation="PAPGVAAGAPAPVEREEPPEQRAVVVLPVSSTQAARTRTLVPGV
                     AGVTIRRAANALHRRGFRVAVYGKGAVVRTTPAAGDSAAVGSLVTVYAE"
BASE COUNT          763 a         1811 c         1711 g          746 t
ORIGIN      
        1 cgcgtcaccc agcttgagct ggcgggtagc ccggtcatac cagccatctg ccctcgtccc
       61 gatccggaag cggagccggt cgcccttccg cccttccgcc cggcgctcca cctcgggatc
      121 gtcgccgttg agcacccagc agctggtgat gttggcgttg cggtagaggc ggtccttgtc
      181 ggcgtagtat tcctcgagcg agctgtaccg gtcgaggtgg tcgggcgcga ggttggtcat
      241 cgcgccgatg gccgggacca gatcgaatgt gtcgtgcagc tggaaggagg acgcctccag
      301 cgccacccac tccggccgct tcccctccag cgccagttgc gccagcggcg tcccgatgtt
      361 tccggcagtc accgccttga acccggcggt ctcgagcagg tggccggtca gggccgtggt
      421 cgtggtcttg ccgttggtcc ccgtgatcac cgcgaagcga acccccggca gcgccgcgta
      481 gcccacatcg agctccgaga ccacgggcac tcccgcatcg cgcgctgcca tgagcggtgg
      541 cgcggtgggg gggacacccg gtgagatcac gcagacgccg gcccggccga tccggaccag
      601 atcgtgaccg ccgacctgga cctcgacccc ggcctcctgc atccgccgta gcagaaccgg
      661 cgcttccgcg cccagcagct tgccaagatc cttggccgca tcggaggcat agacccggag
      721 cccttcccgg cggagcagca gggccgccgc cgttccgctc ttgccgagtc ccaccaccac
      781 ggcctcgcgg ccattggcgc gccagcgggc gaagctcatc ggagtttgag ggtcgcgagc
      841 gccagcatgg cgcagaagat ccccaggata tagaaccggg tgaccacggt actctcgtgc
      901 cacccgagct tctcgaaatg gtgatgcagc ggcgccatgc ggaacacccg gtgggcgtcg
      961 gcgtactcct ttccgcgact gcgcttgtgc cacttgtaga ccccggtctg cagcatcacc
     1021 gacaccgcct cggccgcaaa caccccgcct acgatcagga gcagaaactc cgccttgagg
     1081 agaatcgcga cggtgccgaa cgcgccgccc agcgccaggc ttccggtgtc acccatgaac
     1141 acctgggcgg ggtgagcatt gaaccagaga aatccgatgc acccgcccag catcgcgccg
     1201 cagaagatcg agagctcgcc ggcgccgggg aggtagaaga ggttgagata ggcggtcgcg
     1261 tccacccggc ccaggatgta gccgaagagc gcgaaggccc cggcggcgat ggcggagagc
     1321 cccgcggcca gcccatcgag gccgtcggtg aggttcaccg cattgctgct gccggtgatc
     1381 acggtggtga cgaacgcgac gtagatccag ggccagaagg tgacgatgac gaacttgaag
     1441 aacggcaccg tcgtcgccga ggcgggaatg gtgtcgcttg ggacgacggg gaagtacagc
     1501 agcagggtgc cgaggaccac gccaaagctc acctgtcccg ccagcttcca cttggccacc
     1561 agcccgcggg acttcccttc cacgatcttg aggtagtcgt cgaggaaccc gatcccaccc
     1621 atccagagcg tggcgagcac cgcgaagagc agatagcggt ttgccacctg gccccagagc
     1681 agcgcggaga tgatgcagct gagcaggatg atcaccccgc ccatcgtcgg agtgccgcgc
     1741 ttcccctggt ggctcgcggg gccttccgcc cggatcacct gcccgatctt ccgggcccgc
     1801 aggcgggcga tgatcggcgg cccgatcagg aatgcgatca ggatcgccgt caccgtcgct
     1861 cccgcggccc ggaagctgat gtagttgagc aggttgaaca ggatgaagtg cttgcccagc
     1921 ggggcgagca ggtggtagag cacggcgcct cagtgagtcg gggtgtggtc ctggccggtg
     1981 aggaacggga ggatccgctc gagcgcggcg cctcgggacg ccttcagcac gatcaattca
     2041 tcaccctgga gccgggcctt gaggagcgga cccatgctgg tggcgtcggg cgcggagatg
     2101 agccgcccct tgagcttctc ggaatagcgc gccagcgccg ggacgaactc gcccaccgcg
     2161 gcgaggacgt cgggctcgag cccgaccagc gccgcggcca cagccgcgtg atgtcgcgcg
     2221 gcctcggtgc ccagctcccg catggtgccc gccacgaaca ccagcttccg acccgcgcgc
     2281 atggtccgcg ccgtggcgat tgccgccagg aacgacgatg gattggcgtt gtagctgtcg
     2341 ttgatgatgg tgagccctcc ggcctcgatc agctcccccc gtccacccgg aatccggagc
     2401 gtccggagcg cctccgcggc ggcggtgaga tccagcttga gttcctgcgc cagggtccag
     2461 gccagcatcg cgttggacgc ctggtgctgc cccaggagcg gcagcaggat gcgggcattc
     2521 tcgaccgcca gggtgggttt accggtcgag tcgatggtga ccgacaccgg cacccggtcc
     2581 gcccgggcga ggcccgcggt gatcacccgc ttggcccggc gccgcgcccc ttcggcaagt
     2641 tggggcggat cggtgccgac gatggcgagc tccaccccgt cgatgaggtc gagctcttct
     2701 tccagcactc cttcgagact gccgaacccg tcgagatggg agaccgccac gttggtggtg
     2761 acggtcaccg tcggctcgat gaccggacgc gcccgggcga gttcaccccg cacactggcg
     2821 ccggcttcga tcaccagcgc ctcggtgtcc tccggcgcgg cgagaatggt cttggggatc
     2881 ccgaccaggt tgttgtcgtt ggccggagtg gaatgcaccc ggtacctggt gcggagcacc
     2941 gcggcgcaca tttccttggt gctggtcttt ccgttggcgc cgccgatcgc gaccaccgga
     3001 ccctgtatct cgcgccgccg cgcccgggcg aggagcccgt agccggccag cgtgtcggcc
     3061 acgtgataga ggcggagccc ctgcacgtcg ggggtgccca cccgcaccag cgcgccggtc
     3121 gctcccgcct ccgccgcctt ggccagatgg tcatggccat cgaaccggtc gcccctgagc
     3181 gccacgaaga gcgatcccgg ctcgagcgtg cgggtgtcgg tcgagatcgc ggcatacggc
     3241 gtctcgtccc cacccgggag acccagcgcg gcccgaacgg tggcgtcagt ccagcgcatg
     3301 acccagcagc tcccggacga tccgggcttc gtcgaacggc accttctcgg tcccgatcac
     3361 ctggtaggtc tcgtggccct tgcccgcgag gagcacggtg tcctccgccc tggcggcctt
     3421 gagcgcggcg gcgatggcct cgcggcggtc ggtgaagcgc tggtgcggag tgcttcccat
     3481 cccctgctct acctcgtcga tgatgaagtc gggcgactcg cggcgcggat tgtccgaggt
     3541 cacgatggcg agatcggcga gctccgcggc gatccgcccc atcaccgggc gcttcccccg
     3601 gtcccgctcg cccccgcagc cgaagaccac gatcagacgt cccgtcgtga ccggccggag
     3661 cgactgcagc gcccgctcca gggcatcggg cgtgtgggca tagtcgcgga gcaccaccga
     3721 gggacgctcc acgatccgct ccatccttcc cggcacctgc ggcgccaggt tgagccgctt
     3781 cgccacatgc gccagcgact tcccgagcgc gagacccgcc gccgcggccg ccagcgcgtt
     3841 cgagatgttg aactcgccga gcagcggcag ggcgatcggc acgttgccgt gcggggtcgt
     3901 caggagaaag ctgctccccg cgttgccaag ctgcggctcc accgcccgga ccatcgccgt
     3961 ggggccaaaa ccccaggtga tccgccggtg ccgcgccgga agcgcctccc acgccgggtc
     4021 gtcgacgttc accacctgca cgccgtcgat gccgagcaga gaatcgagcc ggagcttggc
     4081 ggcgaggtac gactccatcg tcccgtgata gtcgagatga tcgcgggtga gattggtgaa
     4141 gatcccggcc gcgtaggtga gcccgtcgag ccgtccctgg tcgagactgt gcgacgaggt
     4201 ctccatcacc acatgggtca cgccccgact cacgagggcc gccagcgtcg cctggaggtc
     4261 gatcggtcct ggggtcgtca gcgatccggc ggtcgacgcc actggctgcc ccgccccgtc
     4321 gaacgcaccc agcgtcccga tgctgccggc ggtgccatgc tcattgaaga ggtggcgcac
     4381 cagcgcggtg gtcgtggtct tcccgttggt gccggtcacc ccgatcaggg tgagcttcct
     4441 gcccggatcg ccgtgccagg tccggcccag cgtcagggcc gcgagacgtc cgtcgcgcac
     4501 cagcaccgcc gggactccgg cgccatcgcc ccgctcgacg accacgaccg cggcaccctt
     4561 cttcgccgcg tcggccacga actggtgtcc gtccgcctgg gagcctcgca ccgcgatgta
     4621 ggccatgccc ggcttcacct cgcggctgtc cgcggtcaca ccggtgaccg gaggcagcgc
     4681 ggccggggcc gactcgagca gcccgtcgcg ccggagagca tccaggagtt gagcgaaagg
     4741 tcgcgcggtc attcggcgta caccgtgacg agtgacccga ccgcggcgga gtcgcccgcc
     4801 gccggcgtgg tccgcaccac cgcccccttc ccgtacaccg ccacccggaa gccgcggcgg
     4861 tgaagcgcat tcgccgcccg gcgaatggtg accccggcca cccccggcac cagcgtgcgg
     4921 gtccgggccg cctgggttga gctgacggga agcaccacca ccgcccgctg ctcgggcggc
     4981 tcctcccgct cgaccggcgc cggcgctccc gctgccacac ccggcgcggg c
//
LOCUS       DATIFF010000577         3755 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_688719, whole genome shotgun sequence.
ACCESSION   DATIFF010000577 DATIFF010000000
VERSION     DATIFF010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3755
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_688719"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(138..962)
                     /locus_tag="VLD58_08655"
     CDS             complement(138..962)
                     /locus_tag="VLD58_08655"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008983 - protein-glutamate
                     O-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HSB54413.1"
                     /translation="MALSAADFQFVSALVRQRSAIVLEPEKAYLLEARLSPLARTEGF
                     ASIEAMVMQMRAQPTNGLHRKVVEAMTTNETSFFRDLYPFEALKTLVIPEVLKHRQAE
                     RQLSIWCAASSSGQEPYTIAMTLMDHFPQLATWNVKILATDISSEMVARSRAGRYGQI
                     EVNRGLPANLLVKYFEKKGMEWVVRPELQRLCEFRELNLIEPWGALPPMDVVFLRNVL
                     IYFDVDTKRTILGNVRRVLQPWGYLFLGGAETTINLGDTFNRVQFDRAGCYRLKSA"
     gene            complement(976..2046)
                     /gene="cheB"
                     /locus_tag="VLD58_08660"
     CDS             complement(976..2046)
                     /gene="cheB"
                     /locus_tag="VLD58_08660"
                     /EC_number="3.1.1.61"
                     /inference="COORDINATES: protein motif:HMM:NF001965.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis-specific protein-glutamate
                     methyltransferase CheB"
                     /protein_id="HSB54414.1"
                     /translation="MLPLRVLVVDDAVIVRRLVMQTLAADPEFEVLGSASTGLLALER
                     IETLTPDVVTLDLDMPEMDGFEALRRIRAKWPALPVLVFTGAYEDEIVPELEALGASA
                     TLRKLPHEGNMRGAIGWVREMLVPALKALPRQARPAPPAERIAAAVASPAGSRPARAP
                     AVLGIGASTGGPNALETLLGALPADLGVPILVVQHMPDGFTRLLAERLSAKTPFEATE
                     ARQGDILAPDRIWIAPGDRHLYVERSREGIRLQTSSAPPENSCRPAVDVLFRSLAEVF
                     GDGTLAVVLTGMGQDGMLGAERVVRMGGRVLAQDEASSVVWGMPGAVARAGLADRVLP
                     LTDLPAEIAARVRGAGAFALNP"
     gene            complement(2046..3524)
                     /locus_tag="VLD58_08665"
     CDS             complement(2046..3524)
                     /locus_tag="VLD58_08665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54415.1"
                     /translation="MATPAAPAEPAASFDLVAAAEQVVRTAGRGSWNLFVTGPDLVLL
                     HQNPAALAATTAADAELRRAFARGARDLMNQSLLRIHPAPTRLQAVLGDGSELPREVQ
                     WSFGRVVWKGWMHPVRRPDGALAGVAIAWQDESELHRSQAAFERLRSEAEDLPVAVMF
                     PDTTYERWFGNAACEHALERLAPHLARPVNPIEGVPIQLFLPDEAERSALFRDPARLP
                     FKRQIKVGPETVSFLITAVLDEAQRFLGPQMTWEIVHFTRPEAERPEAGGGRGAEAGV
                     GPGLEEHVGVETVPPATGLRPPAPVPPASGPRPPANTPANQLRAEAKSLEAAGQELLL
                     LTRLLLAVADDADGQVHVATTSPDQLAEAALSSRAETATVAAAALAVLEAARQAPGTQ
                     HPRREETERALATLNGIARRANRIALDGALLAVQDETAIQTAELAEESRAFTRGLVER
                     LRALTARAQDSADVLRQSATAAARLAALRSQLGDGHAGGGEG"
     gene            complement(3524..>3755)
                     /locus_tag="VLD58_08670"
     CDS             complement(3524..>3755)
                     /locus_tag="VLD58_08670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54416.1"
                     /translation="IAGAVEEQTATTSEMSRNIADAARGTSEISGTIASMAQAALATS
                     ESTANSQRATAELAAMASDLRRLVGRFTYEAR"
BASE COUNT          555 a         1347 c         1287 g          566 t
ORIGIN      
        1 ctgcacgctg cccgccacca tccgtgacgg cgctgccggg aggtccggct ggcgcaccag
       61 gctcatgccc agcaccgatt cccacaccgt gctggccacc tggacgattt cctcttccag
      121 aaactgcatc gttcccccta agcgctcttg agccggtagc atccggcccg gtcgaactgc
      181 acccggttga aggtgtcgcc cagattgatg gtcgtctccg ccccaccgag gaagagataa
      241 ccccacggct ggagcacccg gcgcacgttg ccgaggatgg tccgtttggt gtcgacgtcg
      301 aagtagatca gcacgttccg gagaaacacc acgtccatcg gcgggagcgc gccccagggc
      361 tcgatcagat tgagctcgcg gaattcacag agccgctgca actcgggccg gaccacccac
      421 tccatgccct tcttctcgaa gtacttgacc agcaggttgg ccgggaggcc ccggttcacc
      481 tcgatctggc catagcggcc cgccctgctc cgcgcgacca tctcgctgga gatgtcggtc
      541 gcgaggatct tcacgttcca ggtggcgagc tgcggaaagt ggtccatcag ggtcatcgcg
      601 atggtgtacg gctcctgccc gctggagctg gccgcgcacc agatcgagag ctgccgttcg
      661 gcctggcggt gcttgagcac ctccgggatc accagcgtct tgagcgcctc gaagggatac
      721 aggtcgcgga agaagctggt ctcgttggtg gtcatcgcct cgaccacctt gcggtgcagc
      781 ccgttcgtgg gctgggcccg catctgcatc accatggcct cgatgctggc aaacccctcg
      841 gtccgcgcca gcggcgacag ccgggcctcg agcaggtacg ccttctccgg ctcgagcacg
      901 atggcggaac gctggcgcac cagcgcactg acgaactgaa agtctgcagc actcagagcc
      961 acgctggtcc gctccttacg ggttgagcgc gaacgcccct gcgccccgaa cccgggccgc
     1021 gatctccgcc ggcaggtccg tgagcggcag gacccggtcg gccagccccg cccgggccac
     1081 ggcgcccggc atgccccaca cgacactgct cgcctcgtcc tgcgccagga cccggccgcc
     1141 catgcggaca acccgctcgg caccgagcat tccatcctgc cccatccccg tcagcacgac
     1201 ggccagcgtg ccgtcaccga agacttccgc gagggagcgg aacagcacgt ccacggccgg
     1261 cctgcagcta ttctcgggtg gtgcagagct cgtctgaagc cggattccct cccggctccg
     1321 ctcgacatac agatgccggt cgcccggggc gatccagatc cggtcaggcg cgagaatgtc
     1381 gccctgacgg gcctcggtgg cctcgaaggg agtcttagcg ctcagccgtt cggccagcaa
     1441 ccgggtgaag ccgtcgggca tgtgctgcac caccaggatc ggaacaccga ggtctgcggg
     1501 aagcgcgccg agcagggtct ccagcgcatt gggtccgccg gtggatgccc cgatgccgag
     1561 cacggccggc gcccgcgctg gacgagatcc ggctggcgac gccacggccg cggcaatcct
     1621 ctccgccggt ggagccgggc gggcctgacg cggcagcgcc ttgagcgccg gcaccagcat
     1681 ctcccgcacc cacccgatgg ccccgcgcat gttgccctcg tggggcagct tccggagtgt
     1741 cgccgaggcg cccagggcct cgagctcggg tacgatttca tcctcatacg cgccggtgaa
     1801 gaccagcacc ggtagtgcgg gccacttcgc gcggatgcgt ctgagcgcct cgaacccgtc
     1861 catttcgggc atgtcgaggt ccagggtgac gacgtcgggc gtgagagtct cgatgcgctc
     1921 gagcgccagg agcccggtcg aggcggagcc gaggacctcg aactcgggat cggcagcgag
     1981 ggtctgcatg accaaccgtc ggacgatcac cgcatcatcg acgaccagta cccggagcgg
     2041 gagcatcagc cctcgccccc tccagcgtga ccatcgccca gctgggaccg gagcgcggcg
     2101 agccgggcgg cggcggtcgc gctctggcgc agcacgtcgg ccgagtcctg ggcccgggca
     2161 gtaagcgccc gcagccgctc caccagtccg cgggtaaagg cgcgcgactc ttcggccagt
     2221 tccgccgtct ggatcgcggt ctcgtcctgc accgcgagca gcgccccatc gagcgcgatg
     2281 cggttggcac ggcgcgcgat gccattcagg gtggcgagcg cccgctcggt ctcttcccgc
     2341 cggggatgct gggtgccggg agcctgcctg gcggcctcga gcaccgccag cgccgccgca
     2401 gccaccgtcg cggtctcggc ccggctcgac agcgccgcct cggccagctg gtcggggctg
     2461 gtagtggcga cgtgcacctg tccgtccgcg tcgtcggcca cggccaggag aaggcgggtg
     2521 aggagcagca gctcctggcc cgcggcttcg agggatttgg cttccgctcg aagctggttt
     2581 gctggcgtat tggccggagg ccgggggccg gaggctggag gaacaggggc cggaggccgg
     2641 aggccggtgg ccggtggaac tgtctccacg ccgacatgtt cctcaaggcc cgggcccact
     2701 cctgcctccg cccccctccc gcctccggcc tccggcctct ccgcctccgg cctcgtaaag
     2761 tgcacaatct cccacgtcat ctgcggaccg agaaatcgct gcgcttcgtc gagtaccgcg
     2821 gtgatgagaa aggaaaccgt ctccggcccg accttgatct ggcgcttgaa cgggagcctc
     2881 gcgggatcgc ggaagagcgc gctgcgctcg gcttcgtccg gcaggaagag ctgaatcggc
     2941 accccctcga tcgggttgac cggacgggcg agatggggcg cgagccgctc gagcgcatgc
     3001 tcgcaggcgg cgttgccgaa ccagcgctca taggtggtgt cggggaacat caccgcgacc
     3061 ggcagatcct cagcctcgga ccggagccgc tcgaacgcgg cctgggaccg gtgcagttcg
     3121 ctctcgtcct gccaggcgat cgcaacaccg gcgagggcgc catcgggacg gcgcaccggg
     3181 tgcatccagc ccttccacac cacccgtccg aagctccact gcacctcccg gggcagctcg
     3241 ctgccatctc ccagcacagc ctggagtcgg gtcggcgcgg ggtgaatccg gagcagtgac
     3301 tggttcatca ggtcgcgggc gccgcgggcg aaggcgcgcc gcagctccgc gtccgccgcg
     3361 gtggtcgccg ccagggccgc ggggttctgg tgcagcagca ccaggtccgg cccggtcacg
     3421 aaaagattcc agctcccccg ccccgccgtg cgcacgacct gctctgcggc ggcaaccaga
     3481 tcaaacgatg cggccggctc ggccggcgcg gcgggggtgg ccatcagcgc gcctcatagg
     3541 tgaagcgccc gaccaggcgc ctgaggtcgg aggccatggc ggcgagctcg gcggtggcgc
     3601 gctggctgtt ggcggtgctc tcgctggtgg cgagcgccgc ctgggccatg gacgcgatgg
     3661 tgccgctgat ctcgctggtg ccgcgggcgg cgtcggcgat gttgcggctc atctcgctgg
     3721 tggtggcggt ctgttcctcc accgcccccg cgatc
//
LOCUS       DATIFF010000578         1572 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_534857, whole genome shotgun sequence.
ACCESSION   DATIFF010000578 DATIFF010000000
VERSION     DATIFF010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1572
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_534857"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..945
                     /locus_tag="VLD58_08675"
     CDS             <1..945
                     /locus_tag="VLD58_08675"
                     /inference="COORDINATES: protein motif:HMM:TIGR01420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HSB54417.1"
                     /translation="PLTKQRLTPDQTRAIALKLLPNEDDRARLDHLKDFDCSWGMPGV
                     GRFRVNVLRQRSSFMIVMRVIPFAVPTIEELKLPPITARLAELEQGLLLVAGVSGSGK
                     SSTVAGMLNHINQNLHRHIVTVENPIEFLHRDVKCSVTQREVGVDTDSFAVGLQAALR
                     QDPDVIVIGEIADSETLDTAIKAAERGHLVISTLPTPDVISTVSRLHSMFPAVEREIG
                     TIRLSEILRGIVCQRLLPRKDEGGRVVAVEVLTTPPPVRAILRDPERLGALRVVMMEG
                     GDEGMQAFEQHAARLVEEGAITQEAAVALGVAGHTTRK"
     gene            1117..>1572
                     /locus_tag="VLD58_08680"
     CDS             1117..>1572
                     /locus_tag="VLD58_08680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54418.1"
                     /translation="MAGAGLGWLTLLEIPLLLRPGVPRFAALLVWLIGLVALAALGWG
                     LGTGAAVPGAEQRDDANLIATRGSGPIRRWIVAHVDSKAQGYSMAGRLGAVWVLIVTI
                     VTGTALVVYRAMEPSLPTALVAALAGMSLAAGLLARQGRLRGTSPGARDN"
BASE COUNT          225 a          531 c          551 g          265 t
ORIGIN      
        1 ccgctcacca agcagcgtct tacgcccgat cagacccgcg cgatcgccct caagctcctt
       61 cccaacgagg acgaccgggc ccggctcgac catctcaagg atttcgattg ctcctggggc
      121 atgcccgggg tggggcgctt ccgggtgaat gtgctccggc agcgttcctc gttcatgatc
      181 gtgatgcggg tgattccctt cgcggtgccg accatcgagg agctcaagct gccgccgatc
      241 accgcccggc tggcggagtt ggagcagggc ctcctgctgg tggccggcgt ctcggggagc
      301 ggcaagagct cgaccgtggc cgggatgctc aatcacatca atcagaatct gcaccgccac
      361 atcgtcacgg tggagaatcc gatcgagttc cttcatcgcg acgtgaaatg cagcgtcacc
      421 cagcgcgagg tcggggtcga caccgacagc ttcgcggtgg ggttgcaggc ggcgctgcgg
      481 caggatcccg acgtgatcgt gatcggcgag atcgccgaca gcgagaccct cgacaccgcg
      541 atcaaggcgg cggagcgggg ccacctggtg atctccaccc tgccgacgcc ggatgtgatc
      601 agcacggtca gccggcttca ctcgatgttc ccggcggtgg agcgcgagat cggcaccatc
      661 cgcctctcgg agattctccg cggcatcgtc tgccagcgcc tgctgcctcg caaggacgaa
      721 ggcggacgcg tggtggcggt cgaggtgctt accaccccgc cgccggtccg cgctatcctg
      781 cgcgatcccg agcgcctcgg cgcgctccgt gtcgtgatga tggagggcgg ggatgaaggg
      841 atgcaggcct tcgagcagca tgcggcccgc ctggtcgaag agggtgccat tacccaggag
      901 gcagcagtcg cgctgggtgt cgcgggccac accacccgga agtaggccct ggacccggtc
      961 gagctgtacc acgcgctcgt cgcgctgccg cgggaggcgg gaaccccggc ggcacaggag
     1021 gcgcgggacc tgatccggcg tttcctcgct gcccgcggat tccagatccg ggagcagcgc
     1081 tttctgtttc tgccggccgc actgaatgcc ttcccggtgg ccggcgccgg acttggctgg
     1141 ctcacccttc tcgaaatccc cctcttgctc cgcccggggg tcccccggtt cgcagcgctg
     1201 ctggtgtggc tgatcggtct ggtcgcgctc gccgcgctcg gatgggggct cgggacaggt
     1261 gctgctgtgc ccggggcgga gcaacgtgac gatgccaatc tcatcgccac gcgcggcagc
     1321 ggcccgatcc gccggtggat cgtagcccat gtcgatagca aggcgcaggg gtactccatg
     1381 gcgggacggc tgggcgcggt ctgggtgctg atcgtcacca tcgtgaccgg gacggcgctc
     1441 gtcgtttatc gggccatgga gccttcgctg cccacggccc tggtcgcggc ccttgccggc
     1501 atgagcctgg cggccggtct cctggcgcgt caggggcgac tcaggggcac atcgccgggt
     1561 gcccgcgaca ac
//
LOCUS       DATIFF010000579         5678 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2074160, whole genome shotgun sequence.
ACCESSION   DATIFF010000579 DATIFF010000000
VERSION     DATIFF010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5678
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2074160"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            76..585
                     /locus_tag="VLD58_08685"
     CDS             76..585
                     /locus_tag="VLD58_08685"
                     /inference="COORDINATES: protein motif:HMM:TIGR00072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HSB54419.1"
                     /translation="MTCNPPKTLVVGLGNPLMADDGVGLAALERLREEYDVPPTVALT
                     DGGTWGMMLLPAIEEAEELLLLDAVRTASSPGTLRELGREQLQLYFSHKISPHQIDLK
                     EVLAVADLRGNLPPRLVVIGVEPELVDMRHSLSPCVEIRVGDMVEAAVRQLAEWGHEC
                     VPREVTARA"
     gene            587..835
                     /locus_tag="VLD58_08690"
     CDS             587..835
                     /locus_tag="VLD58_08690"
                     /inference="COORDINATES: protein motif:HMM:NF013334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54420.1"
                     /translation="MSVALEVGRLVEQELARHPGRLLSVGVMVGDDAGFEPESLSFCL
                     EAVLAHPPFDGARPVLNRVPGDDLRLEYLEIDDDRPDD"
     gene            816..1487
                     /gene="hypB"
                     /locus_tag="VLD58_08695"
     CDS             816..1487
                     /gene="hypB"
                     /locus_tag="VLD58_08695"
                     /inference="COORDINATES: protein motif:HMM:TIGR00073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HSB54421.1"
                     /translation="MTVRTIEVREKLMAKNDELAAEVRQRLQALGVPMFNLVSSPGSG
                     KTTLLERTLDLLGEELGIAVVTGDVQTQNDADRLARHTRRLVQAVVTGGACHLDARQV
                     LTALDAIDLADTRLAFVENVGNLVCPASWDLGEMAKIVVLSVTEGEDKPLKYPRMFQK
                     ARYAVFNKMDLLPYVPFDLDLAVKCAREVNPDLEFFFVSAHTGLGLEGWFDFLRRQAR
                     VPAQV"
     gene            1484..3802
                     /gene="hypF"
                     /locus_tag="VLD58_08700"
     CDS             1484..3802
                     /gene="hypF"
                     /locus_tag="VLD58_08700"
                     /EC_number="6.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003998 - acylphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HSB54422.1"
                     /translation="MSAADVTLHAVRIRVTGVVQGVGFRPFAYRLAVEHRLAGWVRNE
                     SGAVEIGLEGSLEDLEAFVTELRRSAPPLAQIESVEQQEAELAGLQGFSILASRDGEL
                     GRLPVPPDVAMCPACESELRDPANRRYRYPFITCTDCGPRFTVIQGLPYDRERTTMRV
                     FHQCPACQAEYERPGDRRHHSETNSCPACGPTLWFEPSADAGDRTLGADGLARAVDLL
                     RAGGIVAIRGFGGFHLACDATSAAAVQELRRRKQREAKPFAVMVGNVLLAAELAELCD
                     DSAALLATRERPIVLLPARPESPVVPEVAPGLAVIGVMLPATPLHQLLLDEIGRPLVM
                     TSGNLSEEPIVIGNDEARQRLGAIADGFLLHDRDILSRADDSVLRPGPGGTVMIRRAR
                     GYAPVPLHLPVTSPIPLLAVGPHLKNTFAMVEGGSAWISPHLGDLESLESLEHFRSMG
                     EAYRRLFKVEPRAVVHDLHPGYLSTRLAKESGIARQIGVQHHHAHVAAVMAEHGVTTP
                     VLGVAYDGTGYGDDGAVWGAEILLADLTGYRRLAHLRYVPLPGGDLAARKLWRIVLGY
                     TTLQPAARAYFEPVLRLVDPAELAVAERQLQTGVNCPRASSMGRLFDAAAAILGVRQV
                     AEYEGQAAMELEALAGLRPAAEYPAIIREDGAGGWEIDPLPLLTRLGLRRLQGYDVAD
                     LAADFHASIAWVTAEVLRRAVESTGITTVVLSGGTFQNARLLLSLLRRMEDRGIRTLV
                     PRRLPPGDGAISFGQAAVAAARLRQESSLRTG"
     gene            3822..4118
                     /locus_tag="VLD58_08705"
     CDS             3822..4118
                     /locus_tag="VLD58_08705"
                     /inference="COORDINATES: protein motif:HMM:TIGR00074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HypC/HybG/HupF family hydrogenase formation
                     chaperone"
                     /protein_id="HSB54423.1"
                     /translation="MCLGIPGRVVDIRDDHGLAMGTVDFGGIRREVCLAYVANEVKPN
                     DYVVVHVGFAISKVDEEEAHRTFEVLREMSQLEELEWMREVAEKSLDPTGGPAA"
     gene            4115..5233
                     /gene="hypD"
                     /locus_tag="VLD58_08710"
     CDS             4115..5233
                     /gene="hypD"
                     /locus_tag="VLD58_08710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HSB54424.1"
                     /translation="MKYLTEYRDPALAKALLHRIQNTATRKWVLMEVCGGQTHTIVKQ
                     GLDELLEGSVEMIHGPGCPVCVTPLEQIDKALRIAARPEVIFTSFGDMLRVPGSDCDL
                     LQVRARGGQVRVVYSPLDAVELARKNPDKQVVFFAVGFETTAPANAMAVYRAKQLGVK
                     NFSILVSHVTVPPAMRAILAAPDNRVQGFLAAGHVCTVMGWTEYEPIAAEYQVPIVVT
                     GFEPLDILEGIAMTVAQLEAGRHEVENQYVRAVKREGTVPARTLVEEVFQLVDRKWRG
                     IGEIPRSGLGLRGEYADFDAELRFGLSDLIREESGECKAGDVLRGQMKPFQCPAFGKS
                     CTPEHPLGAPMVSSEGACAAYYNYGRFRESHAATGATS"
     gene            5230..>5678
                     /locus_tag="VLD58_08715"
     CDS             5230..>5678
                     /locus_tag="VLD58_08715"
                     /inference="COORDINATES: protein motif:HMM:NF012795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase related protein"
                     /protein_id="HSB54425.1"
                     /translation="MTSQSMAQGLVCPVPLSETERVLLGHGSGGKLSAALLRDHFLPY
                     LGNPTLEPLGDAALLPVQSGELAVSTDSFVVSPIEFPGGNIGSLAVHGSLNDLAMMGA
                     EPIGLTAGFILEEGLPFDVLDRVVAAMGAAARAAGVSVVTGDTKVVDR"
BASE COUNT          865 a         1875 c         1995 g          943 t
ORIGIN      
        1 aacggagcgg ggtcatctcg tccatcatca ccgggggacg gttcgtcccg gcggatgagc
       61 actatatcga cgccgatgac atgtaatccc ccgaaaaccc tcgtcgtcgg cctgggcaat
      121 ccgctcatgg ccgacgacgg agtggggctc gccgccctcg aacggctccg cgaggagtac
      181 gacgtgccgc ccacggtcgc cctgacggac ggcggcacct ggggcatgat gctgctgccc
      241 gccatcgagg aggcggagga actgctcctg ctcgatgcag tccggaccgc cagctcgcca
      301 ggcaccctca gggagctggg ccgcgagcag ctgcaactct acttcagtca caagatttct
      361 ccccaccaga tcgatctcaa ggaagtgctg gcggtggccg atctccgggg caacctcccc
      421 ccgcggctgg tcgtcatcgg ggtggagccg gagctggtcg acatgcgcca cagcctctcg
      481 ccctgcgtgg agatccgggt cggtgatatg gtcgaggccg cggtccggca gctggccgag
      541 tgggggcatg aatgcgtccc ccgcgaggtg acggcccgtg catgagatga gcgtggcgct
      601 cgaggtcggc cgcctggtcg agcaggagct ggcccgccat ccgggccggc tgctctcggt
      661 cggtgtcatg gtgggtgacg atgccggctt cgagccggag agcctctcgt tctgcctgga
      721 agcggtgctg gcccatccgc ccttcgatgg cgcaaggccg gtcctcaatc gtgtgccggg
      781 ggatgacctc cggctggaat acctggagat cgacgatgac cgtccggacg attgaagtcc
      841 gcgagaagct gatggcgaag aacgacgagc tggcggccga agtcaggcag cggctccagg
      901 cgctgggcgt gccgatgttc aacctggtct cttcccccgg ctccgggaag accaccctgc
      961 tcgagcggac cctcgatctc ctcggcgaag agctggggat cgcggtggtg accggtgacg
     1021 tgcagaccca gaacgacgcc gatcgcctgg cccggcacac ccgccggctg gtacaggcgg
     1081 tggtgaccgg cggcgcctgc catctcgatg cccgccaggt gctcaccgcg ctcgacgcga
     1141 tcgatctcgc cgatacccgg ctcgcctttg tcgagaacgt ggggaacctc gtctgccccg
     1201 cgagctggga cctgggcgag atggccaaga tcgtggtgct ctcggtgacg gaaggcgaag
     1261 acaagccact caagtatccc cggatgttcc agaaggcgcg ctacgccgtc ttcaacaaga
     1321 tggacctgct gccctacgtg ccgttcgatc tcgatctggc ggtgaagtgc gcccgcgagg
     1381 tcaatcccga cctcgagttc ttcttcgtct cggcgcacac cggcctcggg ctcgagggat
     1441 ggttcgactt cctccggcgg caggcgcgag tcccggccca ggtatgagcg ccgccgacgt
     1501 gacgcttcac gccgtgcgga tccgggtcac cggagtggtg cagggcgtgg gcttccgtcc
     1561 attcgcctac cgtctcgccg tggagcatcg cctcgcgggc tgggttcgca acgaatcggg
     1621 cgcggtggaa atcggcctcg aaggttctct ggaagacctc gaggcctttg tcacggagct
     1681 ccgccggtcg gcgccgccgc tcgcgcagat cgagtcggtg gagcagcagg aggctgaact
     1741 cgctgggctg cagggcttct cgatcctcgc cagccgggac ggcgagctcg ggcggctgcc
     1801 ggtcccgccc gacgtggcga tgtgccccgc ctgcgagagc gagctgcgcg accctgccaa
     1861 ccgccgttac cgctacccgt tcatcacctg caccgactgt ggtccccgct tcacggtgat
     1921 ccagggactc ccgtacgacc gggagcggac caccatgcgg gtcttccacc agtgcccggc
     1981 gtgccaggcc gagtatgaac ggccgggcga ccgccggcat cactccgaaa ccaacagctg
     2041 tcccgcctgt gggcccaccc tctggttcga gccctcggca gatgcgggcg accggacgct
     2101 cggcgccgac ggcctcgccc gcgcggtgga cctcctccgc gccggcggca tcgtggcgat
     2161 ccgcgggttc ggtggctttc acctcgcgtg tgacgcgacc agcgccgcgg cggttcagga
     2221 gctgcgccgc cggaagcagc gggaggcaaa gcccttcgcc gtgatggtgg gcaacgtgct
     2281 cctcgccgcg gagctggccg agctctgcga tgacagcgct gcgctcctcg ccacccggga
     2341 gcggccgatc gtcctgctgc ccgcccggcc agagagcccg gtcgttcccg aggttgcgcc
     2401 cggcctggcc gtgattggcg tgatgctccc ggcgacgccg ctccaccagc tgctgctgga
     2461 tgagatcggg cggccgctgg tgatgaccag cggcaacctc agcgaggaac ccatcgtcat
     2521 cgggaacgac gaagcccgtc agcggctcgg cgccatcgcc gacgggttcc tgctccacga
     2581 ccgggacatc ctctctcggg ccgacgattc ggtcctgcgc cccggccccg gcggaacggt
     2641 gatgatccgg cgggcccgcg gctacgcgcc cgtgccactc cacctcccgg tgacgagccc
     2701 gattccgctc cttgccgttg gtccccatct caagaacacc ttcgccatgg tcgaaggcgg
     2761 ctcggcgtgg atcagccccc atctgggcga cctcgagtct ctcgagtcgc tggagcactt
     2821 ccggagcatg ggcgaggcct atcgccgcct cttcaaggtc gagccccggg cggtggttca
     2881 cgatctgcac cctggatacc tctcgacccg ccttgcgaag gaatcgggga tcgcacggca
     2941 gatcggggtg cagcatcatc atgcccatgt tgccgcggtc atggccgagc atggtgtcac
     3001 gaccccggtg ctgggggtgg cgtatgacgg caccgggtat ggcgatgatg gtgcggtgtg
     3061 gggcgcggaa atcctgctgg ccgacctgac cggttatcgg cgcctggcgc acctgcggta
     3121 cgtgccactc ccgggcggcg atctcgccgc ccggaagctg tggcggatcg tgctcggata
     3181 tacgacgctc cagccggccg cccgggccta tttcgagcca gtcctgcgcc tggtcgaccc
     3241 cgcggaactg gcggtagccg agcgacagct gcagactgga gtcaactgtc ccagggcctc
     3301 gtcgatgggc cggctgttcg acgcggccgc ggcgatcctc ggcgtgcggc aggtagcgga
     3361 gtacgaaggc caggccgcga tggagctgga agcactggcg ggtctccgtc cggcggcgga
     3421 atatcctgcg atcatccgtg aggatggggc agggggatgg gagatcgatc cgctgccgct
     3481 gctcaccagg ctgggactcc ggcggcttca ggggtatgac gtcgccgatc tggcggccga
     3541 cttccatgcc agcatcgcct gggtgacagc tgaggtgctg cgccgcgcgg tcgagtcgac
     3601 cgggatcacg accgtggtgc tctcgggcgg cacctttcag aatgcccggc tcctgctctc
     3661 gctcctccgc cgcatggagg accggggaat tcggaccctc gtgccgcggc ggctgccgcc
     3721 cggcgacggg gccatcagct tcggacaggc ggcagtcgca gcagctcgac ttcggcagga
     3781 atcctcgctc cgtacggggt gacagcttcc agggagatcc tatgtgtctc ggcattcccg
     3841 ggcgggtggt ggacattcgt gacgatcatg gcctcgccat gggcaccgtc gatttcggcg
     3901 ggatccggcg tgaggtctgc ctcgcctatg tcgccaacga ggtgaagccc aacgactacg
     3961 tcgtggtcca tgtcgggttc gccatctcga aggtggatga agaagaggcc caccggacct
     4021 tcgaggtcct gcgggagatg agccagctcg aggagctcga gtggatgcgg gaggtggcgg
     4081 agaagagcct cgatccgaca ggagggccgg cggcgtgaaa tacctgaccg agtatcgcga
     4141 tcccgcgctc gccaaggcgc tgctgcaccg gatccagaac accgcgaccc ggaagtgggt
     4201 gctgatggaa gtctgcggcg ggcagaccca taccatcgtc aagcagggtc tcgacgagct
     4261 gctcgagggc tcggtcgaga tgatccacgg ccccggctgc ccggtgtgtg tgaccccact
     4321 cgaacagatc gacaaggcgc tccggatcgc ggcccggccc gaggtgatct tcacgtcctt
     4381 cggcgacatg ctccgggtgc ccggctccga ctgtgacctg ctccaggtcc gggcccgggg
     4441 cggacaggtg cgggtggtct actcgccact cgacgcggtg gagctggccc ggaagaaccc
     4501 ggacaagcag gtggtcttct tcgcggtggg gttcgagacg accgcccctg ccaatgccat
     4561 ggccgtctac cgggccaagc agctcggcgt gaagaacttc agcatcctcg tctcgcatgt
     4621 gaccgtcccg cccgcgatgc gcgcgatcct cgcagcaccc gacaaccggg tgcaggggtt
     4681 ccttgcagcg gggcatgtct gcaccgtgat gggttggacc gagtacgagc cgatcgccgc
     4741 ggaataccag gtgccgatcg tggtgacggg gttcgagccg ctcgacatcc tcgaggggat
     4801 cgcgatgacg gttgcccagc tggaggcggg ccggcatgag gtggagaatc agtacgtccg
     4861 cgcggtcaag cgggaaggta cggtgccggc ccgcacgctg gtggaggaag tgttccagct
     4921 ggtcgaccgg aagtggcgcg gcatcggcga gatcccccga agcggtctcg gtctccgggg
     4981 tgagtacgcc gacttcgacg ccgagctccg gttcgggctc agcgatctga tccgggaaga
     5041 gtcgggcgag tgcaaggccg gcgacgtcct gcgggggcag atgaaaccct tccagtgtcc
     5101 cgccttcggc aagagctgca cgccggagca tccgctcggc gcgccgatgg tatcgtccga
     5161 aggggcctgc gccgcgtact acaactacgg ccggttccgc gaatcccacg ccgccactgg
     5221 agcgacgtca tgacgagtca gtcgatggcc caggggctgg tctgtccggt accgctcagc
     5281 gagaccgagc gggtgctgct ggggcatggc tcaggcggga agttgagcgc ggcgctgctc
     5341 cgcgatcact tccttcccta tctcggcaat cccacgctcg agccactggg tgatgcggcg
     5401 ctgctcccgg tgcagagcgg tgaactcgcg gtgtcgaccg acagcttcgt ggtcagtccc
     5461 atcgagttcc ccggcggtaa catcgggtcg ctcgccgtgc atgggagcct caacgacctt
     5521 gcgatgatgg gcgccgagcc gatcgggctc acggcggggt tcattctgga ggaggggctg
     5581 ccattcgacg tgctggatcg ggtcgttgca gcgatgggtg cagcggcacg tgccgccggg
     5641 gtatcggttg tcacgggtga taccaaggtg gtcgaccg
//
LOCUS       DATIFF010000580         2183 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_74163, whole genome shotgun sequence.
ACCESSION   DATIFF010000580 DATIFF010000000
VERSION     DATIFF010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74163"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            144..581
                     /locus_tag="VLD58_08720"
     CDS             144..581
                     /locus_tag="VLD58_08720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54426.1"
                     /translation="MTIITHFLATTLGVQALGLEGREAALAYGFGVAVDIDHAIKAPY
                     YLRAVGLRDKRGYYWRSSLQEPVGFLWIAPLCLWLGTAVPVVFYAIHLLMDYSVSFEK
                     MPFYPYSRWVTRGWLVRVPDKVKEAVLCAILLVANVALWWSRR"
     gene            578..1210
                     /locus_tag="VLD58_08725"
     CDS             578..1210
                     /locus_tag="VLD58_08725"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HSB54427.1"
                     /translation="MRRISDWLARPLVRLLHERLGLSPSQLTWASFWASAAAAAAIAA
                     GRVPAGLGLMALGQVLDGLDGGIARAYGLSSERGHRLDTLLDRASESLIFLAFAAAGL
                     APLTHVLLAIGAVLLLTTICDRSGLDPGLKRFVLYFGAWVPYATLFAVIFGANLAAYV
                     VGLLIIDCRFQNRMDALGGDLDTVASRAARLEEAEVAGGRSDVAAAPDPS"
     gene            complement(1857..>2183)
                     /locus_tag="VLD58_08730"
     CDS             complement(1857..>2183)
                     /locus_tag="VLD58_08730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54428.1"
                     /translation="SEIQVGRALGPDKRVLSPLATFGPKDTIFASVVTENAAAGARLA
                     AKWTFQTGQIVDTTTQPVAATSTGQVAVTEFHIVKPSGWPAGKYSVEISLDGKPSGSA
                     QFDVKK"
BASE COUNT          307 a          782 c          709 g          385 t
ORIGIN      
        1 gcccgcgccg gcgtctacac ggcgatcgtg agccgggccc gcgacattct ctggatcgcc
       61 ggcggcctcg ggcttctggc cctgacccgc caccaggccg ccggcacggg ccccatcgcc
      121 ggcacgccag tgaagcccgc cgcatgacga tcatcaccca ctttctcgcg accacgctcg
      181 gcgtgcaggc gctgggcctc gagggccggg aggccgccct ggcctacggg ttcggcgtgg
      241 ccgtagacat cgaccacgcc atcaaggccc cctactacct gcgcgccgtc ggcctccggg
      301 acaagcgggg ctactactgg cgttcgtcgc tccaggagcc ggtcgggttc ctctggatcg
      361 cgccgctctg cctgtggctg ggcaccgccg tccccgtggt cttctacgcg attcacctgc
      421 tcatggacta ttccgtgagc ttcgagaaga tgccgttcta cccgtattcc cggtgggtga
      481 cgcgaggctg gctggtacgg gtgccggaca aggtgaagga agcggtcctc tgcgcgattc
      541 tcctggtggc aaacgtcgcg ctctggtgga gccggcggtg aggcgcatct ccgattggct
      601 ggcgcgcccg ctggtccgcc tgctccacga gcggctgggg ctctcgccgt cgcagctcac
      661 ctgggcgtcg ttctgggcaa gcgcagcggc cgccgcggcc atcgccgccg gccgggtgcc
      721 ggccggcctc ggactcatgg cgctgggcca ggtgctcgac gggctggacg gcgggatcgc
      781 acgggcgtac ggcctctctt ccgagcgggg ccaccgactc gacaccctgc tcgaccgggc
      841 ctcggaaagc ctgatcttcc tcgcgttcgc ggcagccggc ctggcgccgc tcacccacgt
      901 gctgctcgcc atcggggccg tgctgctgct caccaccatc tgcgaccggt ccggcctcga
      961 cccggggctc aagcgcttcg tactctattt cggcgcttgg gtaccatacg ccaccctttt
     1021 cgcggtgatc ttcggcgcca acctcgcggc ctatgtggtc ggactcctca tcatcgactg
     1081 ccggttccag aaccggatgg acgccctggg cggcgacttg gatacggtgg cgtcccgcgc
     1141 ggcccgtctc gaggaggccg aagtcgccgg gggccgaagc gacgtcgccg ccgctccgga
     1201 cccctcctga ggacgcggac agaccgcccc gaatcgcccg gcgcgcaagg tgagccaaca
     1261 aatgaaagcg gccgccggac cgaagtccga gcggccgctt tccgcatcga ctacccgagg
     1321 tcggagcccg aaggctgccg ttcttctctc gcgcgccatc gcggctgttt cgccgcggga
     1381 gggcttccgt gaggcctcgg cttccatccc caggccggat ggccgtccca cctggttcgt
     1441 cgttgcgagc gctgcaggtc ggatcgggtc gcggaccgat ctcccacact gcgttccgat
     1501 gcgccgcatc gggccggatg gagcacgcga ctggctccat caatccaacc ggagtgacca
     1561 ccgggatctg caagcgcctg agcccttggt tgcgtcagcg ctctcctccg atattccggc
     1621 cggaccgctt gctgatcgcc attgaaaccg aaggtctcaa tacgtgctca gcgaagcgtg
     1681 gctcaatata gggcccggag aaaaacgcgc aagtgcctgt ctttcttcgg tttacgcaac
     1741 tcccgtgtgg attcgatgtg gaccgctaag acccacccgc caagcggctt gagcggccgg
     1801 tccacaccat gtgcacatgt gagcgcaagc tctgcacacg catccacacg aacgcattac
     1861 ttcttcacgt cgaactgggc gctcccggac ggcttcccgt ccagcgaaat ctctacgctg
     1921 tatttcccgg cgggccatcc gctcggcttc acgatgtgga actcggtgac ggccacctgg
     1981 ccggtgcttg tggcggccac cggctgcgtc gtggtatcca cgatctgacc ggtctggaag
     2041 gtccatttcg cggcgagcct ggccccggcg gccgcgttct cggtgacgac cgaggcgaag
     2101 atcgtgtcct tcgggccgaa cgtggccagt ggggacagca cccgcttgtc gggcccgagg
     2161 gcccgcccga cctggatctc act
//
LOCUS       DATIFF010000581         1350 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_381243, whole genome shotgun sequence.
ACCESSION   DATIFF010000581 DATIFF010000000
VERSION     DATIFF010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1350)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1350)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_381243"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1322)
                     /locus_tag="VLD58_08735"
     CDS             complement(<1..1322)
                     /locus_tag="VLD58_08735"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSB54429.1"
                     /translation="MVAIATASFVFALAMPALRLVGVGFFPLDDRAEFNVKIETPPGS
                     SLEYTRLKVDEVARLVRGFPEVRYTYATLGGGASGAVDEGNIYVRLTPKHQRALSAEE
                     FAEVVRRKTAGITGVKLSVFTSDFGGGRKQLQLEVRGSDVPTITATAEQVLAEVARVP
                     NVVDLGLSSKGQKPEVTISLNRGLAGSLGITVGDVAQSVRPAFAGLDAGDWVDPSGET
                     RDVEVRLVPESRTRLEDLRRLPLLVVGPSGTPTTVPLGQVADITTTVGPAVINHLDRD
                     PVVNVEWNVAGRSTGEVMNDVRARLAHLQLPPGVRITEGGDAQQQSEVFGNIFIALGV
                     AAMLMYLILVMQFGSFLDPLAIMMSLPLSMIGVMLGLAVTGLTINIMSLIGVILLMGI
                     VAKNAILLIDFAKWAREREGLALREALIQAGAIRLRPILMTTFALIAG"
BASE COUNT          218 a          478 c          442 g          212 t
ORIGIN      
        1 atgccggcga tgagggcgaa ggtggtcatc aggatcggcc gcagccggat ggcgcccgcc
       61 tggatcagcg cctcgcgcag tgccagccct tcccgctcgc gtgcccactt tgcgaagtcg
      121 atcagcagga tggcgttctt ggcgacgatg cccatgagca ggatgacgcc gatcaggctc
      181 atgatgttga tcgtgagccc ggtgacggcg agccccagca tcaccccgat catcgacagc
      241 ggcagcgaca tcatgatcgc gagcgggtcc aggaacgagc cgaactgcat taccaggatg
      301 aggtacatga gcatcgccgc gacgcccagg gcgatgaaga tgttgccgaa cacctcactc
      361 tgctgctggg catctccccc ttcggtgatc cggactcccg ggggcagctg gaggtgagcc
      421 aggcgggccc ggacgtcgtt catgacctct ccggtggacc ggccggcgac attccactcc
      481 acgttcacga ccgggtcacg gtccaggtgg ttgatgaccg ccggacccac cgtggtggtg
      541 atgtcggcca cctgacccag gggcaccgtg gtgggagtgc cgctcggacc gacgaccagg
      601 agcggcagcc gccgcaggtc ctcgagccgg gtgcggctct ccggcaccag cctcacctcg
      661 acatcccggg tctcgccgct cgggtccacc cagtcgccgg catcgaggcc ggcaaaggcc
      721 gggcggaccg actgggccac gtcaccgacc gtgattccga ggctcccggc caggccgcga
      781 ttgaggctga tcgtcacttc cggcttctgg cccttgctgg agagacccag gtccaccacg
      841 ttcgggaccc ttgcgacctc cgccagcacc tgctccgcgg tggcggtgat ggtggggaca
      901 tcgctgccgc gcacctccag ctgcagctgc ttccgcccgc cgccgaaatc actggtgaag
      961 accgacagct tgaccccggt gatgccagcc gtcttccgcc gcactacctc cgcgaactcc
     1021 tcggcgctga gcgcccgctg gtgcttgggg gtgaggcgca cgtagatgtt cccctcgtcc
     1081 actgcgccgc tcgcgccgcc ccccagggtg gcgtaggtgt agcgcacttc ggggaagccg
     1141 cgcaccagcc gcgctacctc gtcgaccttg agccgggtgt actccagact cgagcccggc
     1201 ggggtctcga tcttcacatt gaactcggcc cggtcgtcca gggggaagaa tcccacgccg
     1261 acgagacgca gcgccggcat ggccagcgca aagacgaagc tcgccgtcgc gatcgccacc
     1321 attgtccagc ggtgatccag cgcccaggcg
//
LOCUS       DATIFF010000582         1637 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2227125, whole genome shotgun sequence.
ACCESSION   DATIFF010000582 DATIFF010000000
VERSION     DATIFF010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1637
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2227125"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..425
                     /locus_tag="VLD58_08740"
     CDS             <1..425
                     /locus_tag="VLD58_08740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000369668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HSB54430.1"
                     /translation="RCVQPTFITDFPAELSPLAKARPDDPRYVQRFELYIAGMEVANA
                     YSELNDPREQRRRFEAQVRAREAGDEEAQYLDEDFLRALEYGLPPTAGEGIGIDRLVM
                     LLTDSASIRDVILFPLLRPEARTGDPAAEPAASAASRE"
     gene            433..>1637
                     /locus_tag="VLD58_08745"
     CDS             433..>1637
                     /locus_tag="VLD58_08745"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB54431.1"
                     /translation="MAASLPYELFISLRYLRAKRRVRSLSVITVISTAGVTVGVMALI
                     VVMAVMSGFEFDLRNKILGTNAHIWVLRYGDRGIEDPAGALAEVRQVPGVTAASPFTY
                     NEVLLTAGGRTAGCVLRGIDLASALEATDFRKTLKSASADLTAALQSPHPVFPPDGII
                     LGSYLASSLGVGVGSAVDVLLPLGGDLSPLGVVPRMRRFTVAGVFQVGFAEFDTKLAM
                     IGIPAAQALFRMGTAVSGIEVRVRDIYQASDVAEAIRGRLKFPYFTRTWMELNRNFFS
                     ALRVERIVMFVILTMIVLVAAFGIVSTLIMLVMQKRKEIAVLKSMGATGRSVMAVFVV
                     QGMIIGAAGTALGLLAGLTISRNLDPIVAAVEWLFGFKAFPQDIYLLDKLPARILWPD
                     VVAITVTAFL"
BASE COUNT          230 a          556 c          569 g          282 t
ORIGIN      
        1 cacgctgcgt gcagccgacc ttcatcaccg attttcccgc ggagctgtct ccgctggcca
       61 aggcgcgtcc cgacgacccc cgctacgtcc agcggttcga gctgtacatc gcggggatgg
      121 aggtcgccaa cgcctactcc gagctgaacg acccgcgcga gcagcgccgc cggttcgagg
      181 cgcaggtgcg ggcgcgcgag gcgggggacg aggaggccca gtacctggac gaggacttcc
      241 tgcgcgcgct ggagtacggg ctgccgccca cggccgggga aggcatcggc atcgaccggc
      301 tggtgatgct cctcaccgac tccgcctcga tccgcgatgt gatcctgttc ccgctgctgc
      361 gccccgaggc gcggaccggg gatcccgccg ccgagccggc agcctccgcg gcctcccggg
      421 agtagcgggc ggatggccgc gtctctcccc tacgagctct tcatcagcct gcgctatctc
      481 cgggccaagc ggcgggtgcg gtcgctgtcg gtcatcaccg tcatctccac cgcgggcgtg
      541 accgtgggcg tcatggccct catcgtggtg atggccgtga tgagcgggtt cgagttcgat
      601 ctccgcaaca agatcctggg aaccaacgcc cacatctggg tcctccgcta cggcgaccgc
      661 ggcatcgaag accccgcggg cgcgctggcg gaggtccggc aggtgcccgg cgtgacggcg
      721 gcctcgccct tcacctacaa cgaagtgctg ctgaccgcgg ggggccggac ggcggggtgc
      781 gtcctccgcg gaatcgacct ggcctcggcg ctagaggcca cggattttcg caagacgctg
      841 aagagcgcct cggccgacct cacggcggcc ctgcagagcc cgcacccggt gtttccgccg
      901 gacggcatca tcctcggctc gtatctggcg agtagcctgg gcgtcggcgt gggcagcgct
      961 gtggacgtgc tcttgccgct gggcggcgac ctctcgccgc tgggagtggt tccccggatg
     1021 cggcggttca cggtggcggg cgtcttccag gtgggattcg ccgagttcga cacgaagctg
     1081 gcgatgatcg gcatcccggc ggcgcaggcg ctcttccgta tgggcacagc cgtgtccggc
     1141 atcgaggtgc gggtacggga catctaccag gcgtccgacg tggccgaggc catccgcggc
     1201 cggctgaagt ttccgtactt cacgcggacc tggatggagc tgaaccgcaa cttcttctcg
     1261 gcgctgcggg tcgagcggat cgtgatgttc gtcatcctca ccatgatcgt cctggtggcg
     1321 gccttcggga tcgtcagcac cctgatcatg ctggtcatgc agaagcggaa ggagatcgcc
     1381 gtcctgaaat ccatgggcgc cacgggaagg agcgtcatgg ccgtcttcgt cgtccagggg
     1441 atgatcatcg gtgcggccgg gacggccctg gggctgctgg cgggcctcac catctcccga
     1501 aacctggatc ccatcgtggc agccgtggag tggctcttcg gattcaaggc cttcccccag
     1561 gacatctacc tgctggacaa gctgccggcc cggatcctgt ggccggatgt cgtggccatc
     1621 acggtcacgg ccttcct
//
LOCUS       DATIFF010000583         4158 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1304941, whole genome shotgun sequence.
ACCESSION   DATIFF010000583 DATIFF010000000
VERSION     DATIFF010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4158
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1304941"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(304..732)
                     /locus_tag="VLD58_08750"
     CDS             complement(304..732)
                     /locus_tag="VLD58_08750"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HSB54432.1"
                     /translation="MAGGISATAGDVNSEPNVIPMIDIMLVMLIIFMVSQPLARMALD
                     VQVPPQEQATKSNAQSNQIVLELTEDGGYAINTQPVPKDQLDTQIHAIFDTRPAKLLF
                     IKSAGTRTYQDVIDAMDVARGAGVQVIGFTPAPAPGQQAQ"
     gene            complement(734..1192)
                     /locus_tag="VLD58_08755"
     CDS             complement(734..1192)
                     /locus_tag="VLD58_08755"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HSB54433.1"
                     /translation="MAISAGSAGRSTVKAEPNVIPMIDIMLVLLIIFMIVTPLIAAGF
                     KATMPKGKNLDSRPEGENEIILGVDAGGQYFLNGKGPVDPGVLEEQLKAMYAARTEDK
                     ILYFKADNQLKFARIQDAVELARRSGARVMAAITEPKVQGGLFDAAVKEN"
     gene            complement(1173..1928)
                     /locus_tag="VLD58_08760"
     CDS             complement(1173..1928)
                     /locus_tag="VLD58_08760"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HSB54434.1"
                     /translation="MQHGIDILKLWDAAGTFARGVIVIMAIMSLWSLSVAITKFIMIK
                     KSQGATKKFAPEFSRAIQEENLEKAIALSEKNQASHIAKVLGGALGEVKPLIQDRATI
                     TSADINSAERAVERQMLITLAEFKRGMGVMATVGATAPFVGLLGTTMGIVTAFTGMAA
                     AGASGGLAGISAGIAEALITTAFGLMVAIPAVWFYNYFTTKIENLTVEMTYSSKELID
                     YLIKSVGSEFGRSIFTKEFQAQKAVTGHGHIGG"
     gene            complement(1998..2723)
                     /locus_tag="VLD58_08765"
     CDS             complement(1998..2723)
                     /locus_tag="VLD58_08765"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HSB54435.1"
                     /translation="MFENLIESGRKPKASISQQLVSIAIHAGILFGAVKATQGAAEVI
                     KEIAVDTTMVFLKPPEAPPPPPPEQQVVISANPPPQGFQVVTPPDNIPTEIPPVNLNE
                     RFDPKDFTGKGVEGGIAAGVAGGTGPVPTIEGEVFLAAEVDEQPTMKSGAECVKALTD
                     AYPAVMKSAGIPGKVSMQFVVNTDGRVDPGTVKIMSSSHKAFEEPARTVITSAACTFK
                     TGTSRGQPVRVLVQQGVSFKLAQ"
     gene            complement(3000..>4158)
                     /locus_tag="VLD58_08770"
     CDS             complement(3000..>4158)
                     /locus_tag="VLD58_08770"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSB54436.1"
                     /translation="TAHSKVATGQVQIDGVGEFRYALVPIPGIWLAPASMVVAAPVDA
                     VPFGAQQLLRAMLVIAPVILVGSIGLGYVLADTSLRPLEGMVDEVEAITDGRSLHRRL
                     APVSAEELARLANTMNRMLSRLEESFGSLRRFTADASHELKTPLMVLRAGVERAMTTP
                     KTPTEALQPLEEVLEEIHRMSEMVENLLTLARADEGGARLAVEPADLRDLLGEASETA
                     GILGEENDIAVRTEVPADPVIVAIDRSRIRQLLLNLVTNAIKYTPSGGKVSLGLVDQG
                     EAVAIVVGDNGIGIPAGDLPHIFDRFYRVDPARSRTGERPGTGLGLAITKWIAEAHGG
                     HITVQSRLGRGTVFTVTLPKRPDSATRPLRLGGDEFDAPAGGDMEVPSTPE"
BASE COUNT          662 a         1398 c         1389 g          709 t
ORIGIN      
        1 cgtcccgcgt cgagcacccg cgcgaagtcc gcctcgatcc ggacgaggag gatggcgccg
       61 atcaggagat gcaggatgac cgagaccatc acgccggtcg gggaccgccg cgaagcggga
      121 agcagggcaa aatcgtaccg ggaccgcagg gattttcctc ctcagacaag gcgccagggg
      181 tcgtgggagg ggacgcggag gcccggtccg gctcgcacga aatcacctgc tcaaacatac
      241 gaccgggggg tcgtctggtg acgacccccc gggggactgc agccggcgac cgcctgcgcc
      301 gcgctattgg gcctgctgtc ccggtgccgg cgccggggta aacccgatca cctgcacgcc
      361 cgcaccccgc gcgacgtcca tcgcgtcgat cacgtcctga taggtgcggg tccccgccga
      421 cttgatgaac agcagcttgg ccggacgggt gtcgaagatc gcgtggatct gggtgtcgag
      481 ctggtccttc ggcaccggct gggtgttgat ggcatacccg ccgtcctcgg tcagctccag
      541 cacgatctgg ttcgactgcg cattcgactt cgtggcctgc tcctgcggcg gcacctggac
      601 atccagcgcc atccgcgcga gcggctggga caccatgaag atgatgagca tcaccagcat
      661 gatgtcgatc atcgggatga cgttgggctc ggagtttacg tctccggccg tcgcggaaat
      721 tcccccggcc atgtcagttc tccttgacgg cggcgtcgaa caggccgccc tgcaccttgg
      781 gctcggtgat cgccgccatc acccgggcgc cggagcgccg ggccagctcc accgcgtcct
      841 ggatccgggc gaacttgagc tgattgtccg ccttgaaata caggatcttg tcttcggtcc
      901 gggcggcgta catcgccttg agctgctcct ccagcacgcc cgggtccacc ggtcccttgc
      961 cgttgaggaa gtactggcca ccggcgtcca ccccgaggat gatctcgttc tcgccctcgg
     1021 gccgggagtc caggttcttg cccttcggca tggtggcctt gaagccggcc gcgatcagcg
     1081 gcgtcacgat catgaagatg atcagcagca ccagcatgat gtcgatcatc gggatgacgt
     1141 tcggctcggc cttgaccgtg ctgcggccgg cactacccgc cgatatggcc atgaccagtc
     1201 accgccttct gggcctggaa ttccttggtg aagatcgagc ggccgaactc gctgcccacg
     1261 gacttgatca ggtagtcgat cagttccttg gaggagtagg tcatctcgac cgtgaggttc
     1321 tcgatcttgg tggtgaagta gttgtagaac cacaccgccg ggatcgcgac catcagaccg
     1381 aaggcggtgg tgatcagcgc ctcggcgata ccggcggaga tgccggccag accaccggag
     1441 gcgcccgccg cggccatacc ggtgaaggcg gtcacgatac ccatcgtggt gcccagcagg
     1501 ccgacgaacg gcgcggtcgc gccgaccgtc gccatcacgc ccatgccccg cttgaactcg
     1561 gccagggtga tgagcatctg ccgctccacc gcgcgctcgg ccgagttgat gtcggcggag
     1621 gtgatggtgg cccgatcctg gatcaggggc ttcacctcac ccagcgcgcc gcccagcacc
     1681 ttggcgatgt ggctggcctg gttcttctcg gacagggcga tggccttctc gaggttctct
     1741 tcctggatgg cgcgggagaa ctcgggagcg aacttcttgg tggcgccctg gctcttcttg
     1801 atcatgatga acttggtgat cgcgaccgac agcgaccaga gcgacatgat cgccatgatc
     1861 acgatgacgc cccgggcgaa cgtgcccgcc gcatcccaca gcttcaggat atcaataccg
     1921 tgttgcatga ccgccgaacc tccgtgttga gaagagtgcc cggcccctgg agagggggcc
     1981 ggcccagggt atcgtgacta ctgcgcgagc ttgaaggaca cgccctgctg caccagcacc
     2041 cgcaccggct ggccgcggga cgttccggtc ttgaaggtgc acgccgcgct ggtgataacc
     2101 gtgcgcgccg gctcctcgaa cgccttgtgg ctgctgctca tgatcttgac ggtgccggga
     2161 tcgacccggc cgtcggtgtt caccacgaac tgcatgctga ccttgccggg gatgccggcg
     2221 gacttcatca cggcggggta cgcgtccgtc agcgccttca cgcattccgc gcccgacttc
     2281 atggtgggct gctcatcgac ctcggcggcg aggaacacct cgccctcgat ggtcgggacc
     2341 gggcccgtgc cgccggcgac gccggccgca atgccgccct cgacgccctt gccggtgaag
     2401 tccttggggt cgaaccgctc gttgaggttc acgggcggaa tttccgtcgg gatgttgtcc
     2461 ggcggggtga ccacctggaa gccctgcggc gggggattgg cgctgatcac cacctgctgt
     2521 tccggcggcg gcggcggcgg cgcttcgggc ggcttgagga acaccatcgt ggtgtcgacc
     2581 gcgatctcct tgatgacctc cgccgccccc tgggtcgcct tgacggcgcc gaagagaatg
     2641 ccggcgtgga tcgcgatgga aaccagctgc tggctgatgg aagccttggg cttccggcca
     2701 gattcgatca ggttctcgaa cacggaccgt cctccgtggg gttagccgat gcgagaaggt
     2761 acgcctcagc cattgcagtg caacgccgcg aacatgacaa atcgatgaca gacagattag
     2821 ctgccgggat acgtccggcc ggactgcaga gcctgcgaca gtaacgcacc accgcgtttc
     2881 acccgcacac ggctgcgggc gaaggagaga agcggcgaat attaggaggg agacggcaaa
     2941 ccgccagaga gctgcaccaa agtgtcccgc aatgctgtac gtcagggagg acgcccgcct
     3001 cactccgggg tggaaggcac ctccatgtct ccccctgcgg gggcgtcgaa ctcgtccccg
     3061 ccgagccgga gcgggcgggt ggcgctgtcg ggcctcttgg gcagcgtcac cgtgaagaca
     3121 gttccgcgac ccagccggct ctgcaccgtg atatgcccgc catgcgcctc cgcgatccac
     3181 ttcgtgatcg cgagtccgag cccggtgccg ggacgctcgc cggtgcggga gcgggcggga
     3241 tcgacccggt agaaccggtc gaagatgtgg ggcaggtcgc cggccgggat gccgataccg
     3301 ttgtcaccca ccacgatcgc caccgcttcg ccctggtcca ccagccccag gctgaccttt
     3361 ccgcccgagg gggtgtactt gatcgcgttg gtgaccaggt tcaggagcag ctggcggatg
     3421 cggctccggt cgatcgccac gatcaccggg tcggccggga cctcggtccg caccgcgatg
     3481 tcgttctctt cgcccaggat ccccgccgtc tcggacgcct cgccgaggag gtctctgaga
     3541 tcggccggct ccacggcgag gcgggccccg ccttcgtcgg cccgcgcgag cgtgagcagg
     3601 ttttccacca tctcgctcat ccggtggatc tcctccagca cctcttccag gggctggagc
     3661 gcctcggtcg gcgtcttcgg cgtggtcatc gcccgctcca ccccggcacg gaggaccatg
     3721 agcggcgtct tgagctcgtg gctcgcgtcg gcggtgaagc ggcggagact gccgaagctc
     3781 tcttccagcc gcgagagcat ccggttcatg gtgttggcga gccgggccag ctcttcggcc
     3841 gaaaccggcg ccagccggcg gtggaggctc cgtccatcgg tgatggcctc gacctcgtcg
     3901 accatgccct cgagtggacg gaggctggtg tccgccagca cgtagcccag cccgatgctg
     3961 cccaccagga tcaccggagc gatgaccagc atcgcgcgga ggagctgctg ggcgccgaag
     4021 ggcaccgcgt cgaccggggc ggccaccacc atactcgccg gcgcaagcca gatcccggga
     4081 atcggcacca gcgcgtagcg gaactccccc accccgtcga tctgcacctg cccggtcgcc
     4141 accttggagt gggccgtg
//
LOCUS       DATIFF010000584         1318 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_689251, whole genome shotgun sequence.
ACCESSION   DATIFF010000584 DATIFF010000000
VERSION     DATIFF010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1318
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_689251"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..752)
                     /locus_tag="VLD58_08775"
     CDS             complement(<1..752)
                     /locus_tag="VLD58_08775"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB54437.1"
                     /translation="MTQPIAPSFCSRCGTQVSAGAHFCTVCGSDVSGQQGSLATAQMK
                     PDAARPGGADMYAEQSERLREATLGEYEILGELGRGGMAAVYLAHEVALDRKVAIKVM
                     SPALVSGEGMIERFKREARTAASLSHPHIIPVYAVRESDHLLYFVMKFIAGRPLDGVL
                     KELGPLPIPMIQMILQQVGGAFGYAHRRGIVHRDIKPANIMIDEEGWAVVTDFGIAKV
                     SQAEGLTMTGMTVGTPTYMSPEQCMAQEVTGAS"
BASE COUNT          205 a          458 c          440 g          215 t
ORIGIN      
        1 gaggcgccgg tcacctcctg ggccatgcac tgctcggggc tcatgtaggt cggcgtgccc
       61 accgtcatcc ccgtcatggt gaggccctcg gcctgcgaca ccttggcgat gccgaagtcc
      121 gtcaccaccg cccagccttc ctcgtcgatc atgatgttgg cgggcttgat gtcccggtgg
      181 acgatgccgc ggcggtgggc gtagccgaat gcgccgccca cctgctgcag gatcatctgg
      241 atcatcggga tcgggagggg gcccagctcc ttgaggaccc cgtccagcgg gcgccccgcg
      301 atgaatttca tcacgaagta gagcaggtgg tcgctctcgc gcaccgcgta gaccggaatg
      361 atgtggggat ggctgagcga ggcggcggtc ctcgcctccc gcttgaaccg ctcgatcatt
      421 ccctcgcccg agaccagggc cggcgacatc accttgatcg cgaccttgcg gtccagcgcg
      481 acctcgtggg caaggtatac ggccgccatg ccgccccgcc ccagctcgcc caggatctcg
      541 tactcgccga gggtcgcctc ccgcagccgc tcggactgct cggcgtacat gtccgcccca
      601 ccgggccgcg cagcgtccgg cttcatctgg gcggtcgcca gcgatccctg ctgcccggag
      661 acatcgctgc cacataccgt gcagaagtgt gccccggcac tcacctgagt gccgcaacgg
      721 gaacagaagg acggcgcgat cggctgtgtc acgtcctggt ggtcctctgg cctggggtat
      781 cggtatccct aattaaggcc cgtttgcagt aatacgccag catcaggtca tcggtctcaa
      841 aggcatccag acgccggagc cagatccact gacgggccgc cgggcgtggg atcctccgcc
      901 gcctcgagcg tggggcggga gtcggcggat gccaccgggt gccgagcgaa gcaagagctg
      961 cgcccttccc gacaccggcg ctcgccttcc tgtcctgggt cggaacatcg cacctatcat
     1021 catgcctcac aggtacttgg gactcgcgtg cggggtgcct ggtcagcacg gggacagacc
     1081 gccctgaact gcgacaggcc cgccgccggc gagtggtcac ctcgccggcg ccgagcgccg
     1141 agccccatgg caggatgcga attggcgagc ccaatcccga caggcaggga gcgctctccg
     1201 cccgtgtgcc ggcagtgaat cgagagcggt ccggcaggtg ggagccgccc tctatcggat
     1261 tggccgcgcg gcctggaagt cgtagagcgt gacgagtcgg agccggtagt acgccgcc
//
LOCUS       DATIFF010000585         1197 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_74712, whole genome shotgun sequence.
ACCESSION   DATIFF010000585 DATIFF010000000
VERSION     DATIFF010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1197
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74712"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..263)
                     /locus_tag="VLD58_08780"
     CDS             complement(<1..263)
                     /locus_tag="VLD58_08780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54438.1"
                     /translation="MSQRSDALADRLEQGARALAEFARALSAAEWHSRVPRDGRKVGV
                     VVHHVATMYPLEIQLAGTLAGGRPVTGVTWDAVHQMNAVHARE"
     gene            complement(370..>1197)
                     /locus_tag="VLD58_08785"
     CDS             complement(370..>1197)
                     /locus_tag="VLD58_08785"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSB54439.1"
                     /translation="IPVTERKLTLAAIDTPVLVGGDGPPVVLLHGPAANALHWRWMIP
                     GLVRRYGVVAPDLPGHGDSTVTGILDAERVFLWLAELIEHTCPAPPTLVGNAVGGAIA
                     ARFAARFGDRIRQLVLVDTMGFAAFDPAPAFGTALQAFLARPTEATHDELWRYCAHDL
                     PALQARTGRATWKAFSGYNLDRVIDPAVMSAVEQVMAAFGLPAITPAELARIRVPTTV
                     IWGRYDLATPLIVAEVVAARYGWSLEVIENCADDPPVEQPERLLAALLPLLGGTIRT"
BASE COUNT          190 a          425 c          409 g          173 t
ORIGIN      
        1 tgctcccggg cgtgtacggc attcatttgg tggaccgcat cccaggtcac gcccgtcacc
       61 ggccggccgc cggccagcgt ccccgccaac tggatctcca gcgggtacat ggtcgcgacg
      121 tgatggacga cgacgccgac cttgcgcccg tccctgggga cccggctgtg ccactccgcg
      181 gccgagagcg cccgcgcgaa ctcggcgagg gcgcgggccc cttgttcgag gcgatccgca
      241 agggcgtcac tccgttgact catggttcac cgctctggtt gatgtgggac gtggacgacg
      301 tgagcaccgg tccgcggctg gcgggtcgcc gagccgttcc agggccggac cgcattcggc
      361 ccctgggact caagtgcgga tggtcccgcc gaggaggggc aggagagccg ccaggagtct
      421 ctccggctgt tcgaccggcg gatcgtcggc gcagttctcg atgacctcga gggaccagcc
      481 gtaccgcgcg gccaccacct cggcgacgat cagtggtgtg gcgagatcgt accgtcccca
      541 gatcacggtg gtcgggaccc gaatccgcgc cagctcggct ggcgtgattg ccggcaggcc
      601 gaacgccgcc atgacttgct ccacggcaga catcaccgcc ggatcgatga cgcgatcgag
      661 gttgtacccg gagaaggcct tccacgtcgc ccgccccgtg cgcgcctgca gggcaggaag
      721 atcgtgcgcg caataccgcc acagctcgtc gtgcgtcgcc tccgtgggtc gggccagaaa
      781 cgcctgcaac gccgtgccga acgcgggtgc cggatcgaag gcggcgaagc ccatggtgtc
      841 caccagcacc agctgtcgga tccgatcgcc gaagcgggcg gcgaagcggg ccgcgatggc
      901 cccacccacg gcatttccca ccagcgtggg aggagctgga caggtgtgtt cgatcagctc
      961 ggcgagccac aggaagaccc gctcggcatc gaggatcccc gtcacggtcg agtctccgtg
     1021 tcctggcagg tcgggcgcca ccaccccata ccggcgcacc aaccccggga tcatccaacg
     1081 ccaatggagg gcattggcgg ccgggccatg caggaggacc accggcggtc cgtctccgcc
     1141 caccaggacc ggcgtgtcaa tcgccgccag cgtgagcttc cgctccgtca ccggaat
//
LOCUS       DATIFF010000586         6678 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_689415, whole genome shotgun sequence.
ACCESSION   DATIFF010000586 DATIFF010000000
VERSION     DATIFF010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6678
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_689415"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..707)
                     /locus_tag="VLD58_08790"
     CDS             complement(<1..707)
                     /locus_tag="VLD58_08790"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB54440.1"
                     /translation="MSQDSLIGRTVAGYRLQQHVGEGGTATVYRAEHPERGAVALKVL
                     RTRLAQDPVAVKRFLREAEFGTRVNHPNIVKTYDYGQTDDLYYLAMEWVDGEALEKFA
                     ARSGRLAPPLVATIIEQIGAALTAAHAQGIIHRDLKPANIMYTPETQRAVLLDFGIAR
                     DADLKPEERLTRTGFFVGTLQYVAPEALSGELVTAQADVYSLATIAYYLLTSTLPYTG
                     RSPRELFQQLLTQPPIPL"
     gene            791..2152
                     /locus_tag="VLD58_08795"
     CDS             791..2152
                     /locus_tag="VLD58_08795"
                     /inference="COORDINATES: protein motif:HMM:TIGR04514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GWxTD domain-containing protein"
                     /protein_id="HSB54441.1"
                     /translation="MTPSLTRTTAVLGTALLTLSLAGCGSWGRPGTASPQPGESLAQV
                     LDMGAAYRRIGRMTGAGPTPFVADVAFLAGPGDSTVAVIGVSLENQNLSFQRQGDFFV
                     ARYRVQLNAQPEGGGKAVALGRDQSVRVSTFQETQRSDESVLFQEGMTLAPGSWTITV
                     TVADEIPGKATKATAQYAVPRFAPGTFTPPYLAYQVRGRPTRTTPISVILNPRGTVAY
                     GSDTAIAFVEAYMLPGPRVMPIRLVSGRDSTVRVDSLRFAGGQEVESAILRFTPDSFP
                     LGELHIVLGTSPDTTASSALVSFSSSWVVTNFDDMLSLLRYFPPSPALDSLRKAAPAD
                     RGVAWRNFWKASDPNSATTANEALDQYVRLIALANLRFRDEGIPGWRTDRGEVLVRLG
                     EPDEVFDASPQSEGRLIRWGYTQWQLALYFIDETGFGRFRLTPASRSELERIVAQISR
                     RSD"
     gene            2172..5027
                     /gene="polA"
                     /locus_tag="VLD58_08800"
     CDS             2172..5027
                     /gene="polA"
                     /locus_tag="VLD58_08800"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF004397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HSB54442.1"
                     /translation="MPHHDPPRLFLIDGYALIYRAFFALITRPLRTTKGENTSAAWGV
                     INFLLRLREKYQPDYLAWVHDAGDSFRTQLYAEYKSTREKLDDELQAEFDRSVVRIEQ
                     LLEAFHVEVVSLPGYEADDVIGTLAEQGAAAGLQVVIVSGDKDFYQLIGPRVALLNPG
                     RGGPGGVDETWVDQSNAADRLGVPPGQVVDYLALVGDSSDNVPGVKGIGSKGAVELLT
                     QFGSLESMLARTAEVKGKRAREALEQYQAEARLSRQLVTIRRDVPVTLDLGPLTEMGP
                     DRAVLLKLCAELEFYTLVRRLEGATPSASAAPKTAPATPVEEDPVVGVETGAGPAAPA
                     PAGAAPEITTHLVDDPAEIPALVTKLRAAPLVALAVGTSPVEPHNADLIGLAFAVSPA
                     EAWYLPFAHRPPLGELAAPEPVRNLPALTSASLAPLAELLRDPAVPKAGHDLKYAWQV
                     LRRAGVEVAGVSYDSMLASFVLDPGRRSHALDTLSLEHLGRSLRLYTDIAGRGRNEVP
                     FDEVPLPSAAEFGAATTTTVLALEQFFAPSLSGMGLEQLLRKIELPLVRVLVDMEWTG
                     IAIDPALFTRMSGELTRDLTELEARIASISGSQLNLNSPKQLATLLFDKLQLPVLKKT
                     KTGPSTDADVLEQLAAMGHEVPTLILDYRELQKLKSTYVEVLPLRVNRATGRIHTSFN
                     QTGAATGRLSSSEPNLQNIPVRTPRGEEIRKGFVPGSGQRFVVADYSQIELRLMAHLS
                     EDPAFIAAFRSGGDIHRQTASIIFSVPPGQVTADMRARAKTINFGTIYGQGPFALSRQ
                     LNITQDEAKAFITQYFERFAGVRAYLDLQVKLARSQGYVETLFGRRRYIPEIKDKNFN
                     LRAFAERTAANTPLQGSAADLIKLAMIRIHSALAEEKLRGRLLLQVHDELVLEAPVEE
                     VDATAALVRRHMEGAAELKVPLVVDVGIGDNWLDAKH"
     gene            5036..5416
                     /locus_tag="VLD58_08805"
     CDS             5036..5416
                     /locus_tag="VLD58_08805"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HSB54443.1"
                     /translation="MSAARRGFTFIEILVVMIVIGVLAGLAYARLQSQKEKAIVAGML
                     SDLRAIAEEQEGHYFQNRTYTSDLLALNARLSPGDTMVIVEATSVGWSGRIYNPRSPK
                     QCYILVGRAVPVGSATQDGMINCS"
     gene            5525..>6678
                     /locus_tag="VLD58_08810"
     CDS             5525..>6678
                     /locus_tag="VLD58_08810"
                     /inference="COORDINATES: protein motif:HMM:NF037015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HSB54444.1"
                     /translation="MRFPFPALFLAAAVGAGAACGGSSPTGGSRVPTATIITPQAGAT
                     YHGGSVIQFSGSAVDADGNALPASALSWWAELHHDAHTHPFMPVTSGDAGQVQVPTAG
                     EVSANVFYRFYLRAVDGSRADTAFQDVHPETADITVTTVPAGLSITLDGQPHTAPYTV
                     TGVVGIDRALGVPSPQSSPDSSYDFQSWSDGGAQSHVVSTPATNTTYTATLVATGAAN
                     QPPTVSLTFPANNATLTVNVALQVTATAADPDGSVTQVQFFDDATQLGVDSTAPYAVN
                     WTPTVSGPHVLTARATDNDGAVTTSAAVNVTVAGGSGDTQPPTITLTSPGDGAQGLTG
                     SQSATATADDNVGVVGVEFQLDGVSLGEDLTAPYAMALPPLTNYTTGVHQV"
BASE COUNT         1060 a         2378 c         2185 g         1055 t
ORIGIN      
        1 agcggaatcg gcggctgggt caggagctgc tggaagagct cgcgggggga gcgcccggtg
       61 tacgggagcg tgctggtgag caggtagtag gcaatcgtcg cgaggctgta cacgtccgcc
      121 tgagccgtga ccagctcgcc cgagagcgcc tccggggcca cgtactggag ggtgccgaca
      181 aagaatccgg tgcgggtgag ccgctcctcc ggtttgaggt cggcatcacg ggcgatcccg
      241 aagtccagca ggacggctcg ctgggtttcc ggggtgtaca tgatgttcgc gggcttgagg
      301 tcgcggtgaa tgatcccctg ggcgtgggcc gcggtgagcg ccgcgccgat ctgttcgatg
      361 atcgtcgcca ccaggggcgg ggcgagccgg ccggatcggg cggcgaattt ttccagcgcc
      421 tcaccatcca cccactccat ggccagatag taaagatcat ccgtctggcc gtagtcgtac
      481 gtcttgacga tgttggggtg gttcacccgc gtgccgaatt ccgcctcccg gaggaagcgc
      541 tttacggcca ccgggtcctg ggccaggcgg gtgcgcaaaa ctttgagtgc gacggcgccg
      601 cgctcagggt gctcggcacg gtataccgtg gcggttccac cttcgcccac gtgctgctgc
      661 aggcggtacc cggccacggt cctgccgatg aggctgtctt ggctcatggg gtgggttcca
      721 agctactccg cccctgtacc ccgagcaagc gcgtgcttga ggtctctccc acgctgcact
      781 aagctaggtc atgacacctt cgctgactcg caccaccgcg gtactcggca cggcactgct
      841 gaccctttcg ctggccggct gtggcagctg gggccgcccc gggactgcgt cgccccagcc
      901 gggcgagagt ctggcccagg tgctcgacat gggcgcggcc taccgccgca tcggccgcat
      961 gaccggcgcc ggccccacgc ccttcgtggc cgacgtcgcg ttcctcgccg ggcccggtga
     1021 ctcgaccgtc gccgtgatcg gcgtctccct cgaaaaccag aatctcagct tccagcgcca
     1081 gggcgacttc tttgtcgcgc gctaccgggt gcagctcaac gcccagcccg agggtggcgg
     1141 caaggccgtg gcactgggac gcgatcagag cgtcagggtc tccacgttcc aggagaccca
     1201 gcggagcgac gaaagcgtgc tgttccagga ggggatgacg ctcgcgcccg gcagctggac
     1261 catcacggtg acggtcgccg atgagatccc cgggaaagcc accaaggcga cggcgcagta
     1321 cgcagtcccc cgcttcgcac cggggacctt caccccgccc tacctcgcct accaggtgcg
     1381 cggtcgtccg acccggacca cgccgatttc ggtcatcctg aatccccgtg gcacggtggc
     1441 ctatggcagc gacaccgcca tcgccttcgt ggaggcgtac atgctgccgg gcccgcgggt
     1501 gatgccaatc aggctggtga gcggccgcga cagtacggtg cgggttgatt cgctccgctt
     1561 tgccggcggc caggaggtgg aaagcgccat cctgcgattc acccccgaca gcttcccgct
     1621 cggtgaactg cacatcgtgc tggggaccag ccccgacacc accgccagct cggccctggt
     1681 gtcgttctcg tccagctggg tggtcaccaa cttcgatgac atgctgagcc tgctccgcta
     1741 tttcccgccc tcgccggccc tcgactcgct ccgcaaagcg gcgccggccg atcggggcgt
     1801 agcctggcgc aacttctgga aggcgagcga ccccaactcg gccacgaccg ccaacgaggc
     1861 gctggatcag tacgtccgcc tgatcgcgct ggccaacctg cgcttccgcg atgagggaat
     1921 accggggtgg cgcaccgacc ggggcgaggt gctggtgcgc ctcggggagc cggacgaggt
     1981 gttcgatgcc agtccccaga gcgagggccg gctgatccgc tggggctata cccagtggca
     2041 gctggcgctg tacttcatcg acgagaccgg gttcgggcgt ttccgcctca cccccgcctc
     2101 acgctcggag ctcgagcgga tcgtggcgca gatcagccgc cggagcgatt gacggcgcta
     2161 tcttccgggc catgccgcac catgacccgc cgcgcctgtt tctcatcgac ggctacgccc
     2221 tcatctatcg cgcgttcttc gcgctgatca cccgtcctct ccgcaccacc aagggcgaga
     2281 acacctcggc cgcgtgggga gtgatcaact tcctcctccg cctccgcgag aagtaccagc
     2341 ccgactacct cgcctgggta cacgacgccg gcgactcctt ccgcacccag ctctacgccg
     2401 aatacaagtc cacccgggag aagctcgacg acgagctcca ggcggaattc gaccgctcgg
     2461 tggtgcggat cgagcagctc ctcgaggcct tccacgtgga ggtcgtgagc ctgcccggct
     2521 acgaagccga cgacgtgatc ggcaccctcg ccgagcaggg agccgcggcc ggtctccagg
     2581 tggtcatcgt gtcgggcgac aaggatttct accagctgat cgggccgcgc gtcgcgctcc
     2641 tcaaccccgg acgcggcgga cctggcggcg tcgatgagac ctgggtcgat cagtccaatg
     2701 cggccgatcg cctgggtgtg ccgccgggcc aggtggtcga ctatctcgcg ctggtaggcg
     2761 acagctccga caacgtgccc ggggtgaagg gcatcggcag caagggcgcg gtcgagctgc
     2821 tcacccagtt cggttcgctc gaatcgatgc tcgcgcggac cgccgaggtg aagggcaagc
     2881 gggcccgtga ggcgctggag cagtatcagg cggaggcgcg gctctcccgc cagctcgtga
     2941 cgatccgtcg cgacgtgccg gtgaccctcg acctcgggcc cctcaccgag atggggcccg
     3001 accgcgcggt gctgctcaag ctgtgcgccg agctcgagtt ctacaccctc gtccgccggc
     3061 tcgaaggcgc cacaccctcc gcatcggctg cgccgaagac tgccccggcg actcctgtcg
     3121 aagaagaccc agtcgtcggc gtcgagaccg gcgcgggccc agctgctccc gctcctgccg
     3181 gagcggcgcc cgagatcacc acccacctgg tagacgatcc cgccgagatc cccgcgctgg
     3241 tgacaaagct ccgcgccgcg ccactcgtgg cgctcgcggt cggcaccagt ccggtggagc
     3301 cacacaacgc ggacctgatc ggcctcgcct tcgccgtgag tccggccgag gcgtggtatc
     3361 tcccctttgc ccaccgtccg ccgctcggag agctggcggc cccggagccg gtgcggaacc
     3421 tccccgctct tacctccgcc tcgctggcgc cgctggccga gctgctgcgc gacccggcgg
     3481 tccccaaggc tggccacgat ctcaagtacg cgtggcaggt gctgcggcgg gccggcgtcg
     3541 aggttgccgg ggtgagctac gactcgatgc tcgccagctt cgtgctcgat ccgggccggc
     3601 gctcgcacgc cctcgacacc ctgagcctgg agcatctggg ccggtcgctg cggctctaca
     3661 ccgacatagc ggggcggggc cggaacgagg tgcccttcga cgaggtgccg ctcccgagcg
     3721 ccgcggaatt cggcgcggcc acgactacca ccgtgctggc cctggagcag ttcttcgctc
     3781 cctcgctgag cgggatgggt ctggaacagc tgcttcggaa gatcgagctg cccctggtcc
     3841 gcgtcctggt cgacatggag tggaccggca tcgcgatcga cccggcgctc ttcacccgga
     3901 tgtcgggcga gctgacccgc gatctcaccg agctcgaagc ccggatcgcc agcatctcgg
     3961 ggagccagct caatctcaac agccccaagc agctcgcgac cctgctgttc gacaagctgc
     4021 agctgccggt gctcaagaag accaagaccg gccccagcac cgacgccgac gtgctggagc
     4081 agctcgcggc gatgggccac gaagtcccga ccctgattct cgactaccgc gagctccaga
     4141 agctcaagtc gacctacgtc gaagtcctgc cgttgcgggt gaatcgcgcc accgggcgga
     4201 tccacaccag cttcaaccag accggcgccg cgaccggccg gctcagctcg agcgagccca
     4261 acctccagaa cattccggtg cgtactcccc ggggcgagga gatccggaag ggcttcgtgc
     4321 ccggctccgg gcagcgcttc gtggtggcgg actactccca gatcgagctg cgcctcatgg
     4381 cgcacctctc ggaggacccc gccttcattg cggcgttccg ctccggcggc gacattcacc
     4441 gccagaccgc ttccatcatc ttctcggtgc cgcccgggca ggtcaccgcc gacatgcggg
     4501 cccgggcgaa gaccatcaac ttcggcacca tctacgggca ggggcccttc gccctgtccc
     4561 gtcagctcaa catcacccag gacgaagcca aggccttcat cacccagtac ttcgagcgct
     4621 tcgcgggggt ccgcgcctac ctcgatctcc aggtgaagct ggcccggagc cagggatacg
     4681 tggagacgct gttcgggcgg cggcggtaca ttccggagat caaggacaag aacttcaacc
     4741 tgcgcgcgtt cgccgaacgc accgccgcca acaccccgct gcagggctcc gcggcggacc
     4801 tgatcaagct ggccatgatc cggatccaca gcgccctggc cgaagagaaa ctccgcggcc
     4861 ggttgctgct gcaggtgcac gacgagctgg tgctggaggc gccggtcgag gaagtcgacg
     4921 cgaccgccgc gctggtccgc cgccacatgg agggcgcggc cgagctcaag gtgccgctgg
     4981 tggtggacgt gggaatcgga gacaactggc tcgacgccaa acactaggag cgcacatgag
     5041 cgcggctcgg cgcggcttca cgttcatcga gatattggtc gtgatgatcg tgatcggggt
     5101 cctggcgggg cttgcctatg cgcggctgca gtcgcagaag gagaaggcga tcgttgccgg
     5161 catgctttcc gatctccgcg ccattgccga agagcaggaa ggccactatt tccagaatcg
     5221 gacctacacg agtgacctgc tggcgctcaa tgcgcggctg tccccgggcg acaccatggt
     5281 gatcgtcgaa gccacctcgg ttgggtggtc gggccggatc tacaatccgc gcagccccaa
     5341 gcagtgctac atcctggttg ggcgggcggt ccccgtcggc tcagcgaccc aggacggcat
     5401 gatcaactgt tcctgagcgg cccacgattc agcccgctct cgagatgcga tgccgcaccc
     5461 ctggcatccc caccatcggt tcccggagcg gccgccgctt cggacgttga gtctggagaa
     5521 ggtcatgcgg ttcccattcc ctgccctgtt cctcgcggcc gccgtcggtg cgggcgccgc
     5581 ctgcgggggc tcgagcccca ccggcgggtc ccgtgttccc accgcgacca tcatcacgcc
     5641 acaggctggc gccacctatc acggtggctc cgtgatccag ttctccggca gtgcagtcga
     5701 cgccgacggc aatgcccttc cggcttcggc cctgagctgg tgggcggagc tgcatcacga
     5761 cgcccacacg caccccttca tgccggtcac cagcggcgat gcggggcagg tccaggttcc
     5821 caccgccgga gaagtctcgg ccaacgtctt ctaccggttc tacctgcggg cggtggacgg
     5881 cagccgggcg gacaccgcct tccaggatgt gcatccggaa accgctgata tcaccgttac
     5941 caccgtcccc gccggcctca gcatcacgct cgatggtcag ccgcacaccg cgccctacac
     6001 agtgaccggt gtcgtgggca ttgatcgggc gctcggtgta cccagcccgc agtcgagccc
     6061 cgattcgagt tacgatttcc agtcctggtc cgacggtggc gcccagtcgc acgtggtgag
     6121 cacccccgca accaatacca cctacacggc gaccctggtg gcgaccggtg ccgcgaacca
     6181 gccgccgacg gtgagcctga cgttcccggc gaacaacgcc accctgacgg tgaacgtggc
     6241 cctccaggtc accgccacgg ccgccgaccc cgacggcagc gtgacccagg tccagttctt
     6301 cgacgacgcc acccagctgg gtgtggacag cacggcgccc tatgcggtga actggacccc
     6361 cacggtctcg gggccgcacg tcctgaccgc gcgggccacc gacaacgacg gagcggtaac
     6421 caccagcgcg gcggtgaatg tcaccgtggc aggaggctcg ggcgataccc agccacccac
     6481 gatcacgctc acctcgcccg gcgatggcgc tcagggcctg accggatcac agagcgcgac
     6541 cgcgacggcc gacgacaacg ttggagtggt gggagttgag ttccagctcg acggggtaag
     6601 cctgggcgag gacctgaccg cgccctacgc gatggcactg cccccgctca ccaactacac
     6661 caccggggtg caccaggt
//
LOCUS       DATIFF010000587         4090 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_229640, whole genome shotgun sequence.
ACCESSION   DATIFF010000587 DATIFF010000000
VERSION     DATIFF010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4090
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_229640"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..188)
                     /locus_tag="VLD58_08815"
     CDS             complement(<1..188)
                     /locus_tag="VLD58_08815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54445.1"
                     /translation="MLGFWLLVAPASVRGQDSSLLWPSPGPRAVTASQFAMRHAARAE
                     VPLGTERTAPRAAARRSY"
     gene            complement(220..585)
                     /locus_tag="VLD58_08820"
     CDS             complement(220..585)
                     /locus_tag="VLD58_08820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54446.1"
                     /translation="MRHTLAFAGLLSLACATDPSAPNALQGSWAADIGVPGASLVINL
                     DQAGGVISGTGTYSIEAGRSGTLQIDGTYDPPSVALVIRRDVGSVSTYTGTIVDARHL
                     SGTMVDALGHGAPLTFTRR"
     gene            713..1255
                     /locus_tag="VLD58_08825"
     CDS             713..1255
                     /locus_tag="VLD58_08825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54447.1"
                     /translation="MPPTRLRGTTVVVAVLMTLAPAVYAQAVSSCNDDPGFHVLDFWL
                     GSWNVFVGDTLAGTNRITKVLNGCAVNEDWHDADGSRGASLFYYEPSTRLWKQVWVTE
                     QALEPGGLKEKHLVARLPEGGTRFQGEIPLPDGRIVLDRTTLTPEANGDVRQLIEVSR
                     DGGASWRVTFDARYRRAPGT"
     gene            complement(1267..1557)
                     /locus_tag="VLD58_08830"
     CDS             complement(1267..1557)
                     /locus_tag="VLD58_08830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54448.1"
                     /translation="MLLLAWILAIAGAVVAFVVSLAGAMSSVPQLHWQDAIVAIPLPV
                     LAGSLAAWRLARPGTPKPAARSGVAAVLPLGLAVLTLLFMAMTYFEQPGGPM"
     gene            complement(1576..1962)
                     /locus_tag="VLD58_08835"
     CDS             complement(1576..1962)
                     /locus_tag="VLD58_08835"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSB54449.1"
                     /translation="MSDEPILTAERAFFTGLMQADVEALGKLLADDFLLIDVMQGAEV
                     PRSALLDLIGSGQLRFGAVEIVDSRVRRYGAAAVVTGQTRMRGQFGDQSFTAHSRYTH
                     VYVEREGRWRLVTAQGTRISEANGAV"
     gene            complement(1969..2253)
                     /locus_tag="VLD58_08840"
     CDS             complement(1969..2253)
                     /locus_tag="VLD58_08840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54450.1"
                     /translation="MDDVPHPPLTTREFAVRWHTLVEEHSVQRLTGSLSRLAPVPPGS
                     ASLAPQQYTMMAGCILHALQVAASPSGGVEEAVRYLVQLGTEGATAATRD"
     gene            complement(2337..2558)
                     /locus_tag="VLD58_08845"
     CDS             complement(2337..2558)
                     /locus_tag="VLD58_08845"
                     /inference="COORDINATES: protein motif:HMM:NF021552.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2277 domain-containing protein"
                     /protein_id="HSB54451.1"
                     /translation="MCRNIKRLRHPDHEPTDQELHEAALQFVRKISGVRAPSKANQAA
                     FDRAVHDVAAAGRALFQSLQGSRHTRAAV"
     gene            complement(2736..3377)
                     /locus_tag="VLD58_08850"
     CDS             complement(2736..3377)
                     /locus_tag="VLD58_08850"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HSB54452.1"
                     /translation="MALEPVHPDIARYLDSLVPPRAPELEALEAEAVRTGFPIVGPAA
                     GQFCYLIARLIQARAVFELGSGFGYSTAWFARAVRENGGGVVHHSVWDASLSSRARTH
                     LAALGFADCVRYHVGEAVQALRDTSGPFDLIFNDIDKAGYPAALPVIHDRLRPGGVLI
                     VDNLLWHGQVLDPDDRSADTLGVREFTRLVTTDNGWLASVVPIRDGLLLARRR"
     gene            complement(3681..>4090)
                     /locus_tag="VLD58_08855"
     CDS             complement(3681..>4090)
                     /locus_tag="VLD58_08855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54453.1"
                     /translation="GCRSSDRGMTQLPGTRGNAGFAFAAATGLGFALWSLAPWLVNRR
                     EPWDAEGPFYSLSLVLGTGAIAWWQPSRLAAAYLGAWLGQVLALVVLPWHQDGWLPLG
                     AVTTGFGSLFALVGAALGSALRRAWPPSSGGAA"
BASE COUNT          671 a         1429 c         1425 g          565 t
ORIGIN      
        1 cagtacgagc ggcgcgcagc cgcccgcggc gccgtgcgct ccgtcccgag ggggacctcg
       61 gcgcgggcgg cgtgccgcat ggcgaactgg ctcgcggtga ctgcgcgcgg cccgggcgac
      121 ggccagagca gcgagctgtc ctggccgcga accgacgcgg gtgccaccag cagccagaag
      181 ccgagcaccc agcgactccc acagccggcc aatttcatgt caacgacgag tgaacgtcag
      241 cggcgcgcca tggcccagcg catcgaccat ggtgccgctc aggtgccggg cgtcgacgat
      301 ggttcccgtg taggtactga cagagccaac gtccctccgg atgaccagcg cgacgctcgg
      361 cggatcgtat gtgccatcta tctgcaaggt gcccgaccgc cccgcctcga tgctgtaggt
      421 accggtgccg ctgatcacgc cgccggcctg atcgaggttg atcaccagac ttgctccggg
      481 gacgccaatg tccgcggccc atgatccctg cagcgcattg ggcgcggacg ggtcggtggc
      541 gcaggcgagc gacagaaggc cggcgaaggc aagcgtgtga cgcatcgggt cctcatcgga
      601 aggtgtctcg aatctgcagt ccggcgcgac gacgcaccag cggcgggcgc cacgggcagg
      661 cgccggcgtc cgggatgcga aacccgcccc ggcaggcggc cgtagcgcct gtatgccccc
      721 cactcgactc cgcgggacga cggttgtcgt ggcagtcctc atgacgctcg cacccgccgt
      781 ctacgcacag gcggtctcca gctgcaacga tgatccgggc ttccacgtcc tggacttctg
      841 gctcggatcg tggaacgtgt tcgtgggcga cacgctcgcg gggacgaacc gcatcaccaa
      901 ggtcctcaac ggctgtgcgg taaacgagga ctggcacgat gcggacggca gtcggggcgc
      961 aagcctcttc tactacgagc cctcgacgcg gctgtggaag caggtgtggg tgaccgagca
     1021 agccctcgag ccgggcgggc tcaaggaaaa gcacctggtg gcccgcctac ctgagggcgg
     1081 gacccgcttt cagggggaaa tcccgctccc ggacggccgg atcgtgctgg accgcaccac
     1141 ccttacgccc gaggcaaacg gggacgtgcg ccagctgata gaggtctccc gcgacggggg
     1201 cgcgagctgg cgcgtcacgt tcgacgcccg ctatcggcgc gccccaggga catgatggca
     1261 ccgggactac atcgggcccc cgggctgctc aaaataagtc atcgccatga agaggagggt
     1321 cagcactgcc agccccagcg ggagcacggc cgcaacgcct gaccgtgcgg cgggcttcgg
     1381 tgtccccggt cgagcgagcc gccaagccgc caggcttccg gccagcaccg gcagcgggat
     1441 cgccacgatg gcgtcttgcc agtggagctg gggaacgctg ctcatcgcgc cggccagact
     1501 taccacgaag gcaacgaccg ccccggcgat cgccaggatc cacgcaagca agagcatcag
     1561 gctctcacgg gagagtcaga cggccccgtt cgcttcgctg atccgggtgc cctgcgccgt
     1621 gacgagccgc caccggccct cccgctcgac gtacacgtgg gtgtagcggc tgtgcgccgt
     1681 aaaggactgg tcgccgaact gcccccgcat tctggtctgt cccgtcacca ccgccgcagc
     1741 tccgtagcgc cgcacccggg agtccacgat ctcgacggcg ccgaaccgca gctggcccga
     1801 gccaatcagg tccaggagcg ccgatcgggg cacctcggcc ccctgcatga cgtcgatcag
     1861 caggaagtcg tcggccagga gcttgcccag agcttcgaca tcggcctgca tcaggcccgt
     1921 gaagaatgca cgttcggctg tgaggattgg ctcgtcagac atggcactct agtcgcgagt
     1981 cgctgccgtg gcgccttcgg tgccaagctg aaccaggtag cgcaccgcct cctccacccc
     2041 gccactcggg ctcgccgcca cctgcaacgc atgcagaatg cagccggcca tcatcgtgta
     2101 ctgctggggc gcgagcgagg cagagccggg cggaacgggc gccagccggc taaggctgcc
     2161 agtcagccgt tggaccgagt gctcctcgac gagcgtgtgc caccgcacgg caaactcgcg
     2221 ggtggtcagt ggagggtggg gcacgtcgtc cattggctcc tccgatctgg tggaccgcgg
     2281 ccctcgaccg gcaccgcgga ttggcgtgga cgctccgccg ccggctcatc ggcccgctag
     2341 acggcagccc gggtgtgtcg ggaaccctgg agcgattgga acagcgcccg tcccgcagcc
     2401 gccacatcgt gcaccgccct gtcgaacgcc gcctgattgg ctttggacgg cgcgcggacg
     2461 ccgctgatct tgcggacgaa ctgcaaggcg gcctcgtgca gctcctggtc cgtcggctcg
     2521 tggtcggggt gacggagccg cttgatgttt cgacacatca gaactgttcc tggaacgaag
     2581 gttcgggcac ccgcgacaac ctgcggctgg ccccccaagg cggcattccc accgttcgga
     2641 ctacactgac gttcccccgc caacgccggc tgtcaagggt gcatggtgcc ccgggtgtcg
     2701 tgcgcgagct gcagagccca tcgggcggct ggtgctcagc ggcggcgggc cagcaggaga
     2761 ccatcgcgga tcggcaccac gctcgccagc cagccattgt cggtcgtaac gaggcgggta
     2821 aactcccgga cccccagtgt gtccgcggag cgatcgtcgg ggtcgagcac ctggccgtgc
     2881 cacaacaggt tatccacgat gaggacgccg ccgggccgga gtcgatcatg gatgaccggc
     2941 agggcggcgg ggtacccggc cttgtcgatg tcattgaaga tgaggtcgaa gggacccgag
     3001 gtgtcccgca gagcctggac cgcctcgccc acgtggtacc gcacgcagtc ggcgaagccc
     3061 agagccgcca ggtgggtgcg cgcccggctg gacaagctgg cgtcccaaac gctgtggtgt
     3121 accaccccgc ccccgttctc gcgcacggcg cgggcgaacc aggccgtcga atagccgaac
     3181 ccggagccga gctcgaagac ggcacgggcc tggatcaggc gggcgatcag gtagcagaac
     3241 tggccggcgg cggggccgac gatcgggaag cccgttcgta cggcctcggc ctccagggcc
     3301 tcgagctcgg gcgctctcgg cgggaccagc gagtcgagat acctggcgat gtcgggatgt
     3361 acgggctcga gtgccatggg ggcgctccgg gcgatagcgg cgcgttcggc ctgcggttgc
     3421 gcagcgccct caccagcgct cgtcggccgt gggccctaga tctgcggcag cggaacgtcg
     3481 accagccgca agtagaccgt gagttgtccg cggtggtgga tcagtggttc agatgtcccc
     3541 gaacgacctc cccgcgcggc gccgtgaaga gcacgcgctc cccgtgctgg agtgaccacg
     3601 gggcgtccaa gccgggcccg acgaccgagg ctagcgcatc ccgggcctca cgaacgttcc
     3661 ccttctccgt cggctcgcgg tcaggcggcg cccccgctcg atggcggcca ggcgcggcgc
     3721 aacgcgctgc cgagggcggc ccccaccaag gcaaacaggc tgccgaagcc ggtggtcacg
     3781 gcccccagag ggagccagcc gtcctgatgc cagggcagga cgaccagggc aagcacctgg
     3841 ccgagccagg ccccgaggta ggccgcggcc agccggctcg gctgccacca cgcgatcgcc
     3901 ccggtcccga gcacgaggct cagactgtag aaagggccct cagcatccca gggctcgcgc
     3961 cggttgacga gccacggtgc gagggaccag agggcgaagc ctaagccggt ggccgcggca
     4021 aatgcgaacc ccgcgttgcc gcgtgtgccg ggcagctgtg tcatgcccct gtccgacgac
     4081 cggcaccctt
//
LOCUS       DATIFF010000588         1785 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1766547, whole genome shotgun sequence.
ACCESSION   DATIFF010000588 DATIFF010000000
VERSION     DATIFF010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1785
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1766547"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..998)
                     /locus_tag="VLD58_08860"
     CDS             complement(<1..998)
                     /locus_tag="VLD58_08860"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB54454.1"
                     /translation="MKVCTACGQEYGDEVLFCQKDGTPLRPSGGQTADLVGQVIADRY
                     HIQKKLGEGGMGQVYLAEHVKMGRRCAIKIMSPAMMKDPDAISRFNREAANASRIGHP
                     NVCAIYDFGETPEGLIYLAMEFIEGRSLNSILDESHTLPIPRAASIITQCADALQVAH
                     DLGIVHRDLKPDNIMVTTARGRDTVKVVDFGIAKAVGADGGAQKVTKTGFVVGTPEYM
                     SPEQLAGDPVDGRSDLYSLALVFYRMLTGSSPFPADSQQETMIKRLTDDPLPLATARP
                     DVRFPADLQRVMDRALARSPQDRYPSSAEFARDVRALSGSLTGPVDADAGTQQMSLR"
     gene            complement(995..>1785)
                     /locus_tag="VLD58_08865"
     CDS             complement(995..>1785)
                     /locus_tag="VLD58_08865"
                     /inference="COORDINATES: protein motif:HMM:NF012708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSB54455.1"
                     /translation="LTQVRAAHACSRCGRLNEKGTKFCPACGASTGDTGPQAKVPAPP
                     RASKITPHLALLDRTGNVAHRFPVENAVTTVGRQGADINFPDDEYLSPLHAQFLFVDG
                     ILTVRDLGSKNGTWLYLDEAHRLTDGDAILLGSQIIRFRRLGYPGPRPPEQDQTRRLG
                     SLAPAADIANLAQIRADGSARDILHLSPGRSTRIGREQGDWQFPYDSSMSALHALIRS
                     EDADFVLLDAGSRNGVAVAVRGERRVSPNARLLVGDQMLRAEIG"
BASE COUNT          259 a          593 c          637 g          296 t
ORIGIN      
        1 cggagcgaca tctgctgggt gccggcgtcg gcgtcgaccg ggccggtgag gctgccgctc
       61 agcgcccgca cgtcccgggc gaactccgcc gaggagggat agcggtcctg gggggagcgg
      121 gccagcgccc ggtccatcac ccgctgcagg tccgccggga agcgcacgtc ggggcgggcc
      181 gtcgccagcg gcagcggatc gtcggtgagc cgcttgatca tcgtctcctg ctggctgtcg
      241 gcggggaagg gagagctccc cgtcagcatc cggtagaaga ccagcgccag cgagtagaga
      301 tcactccggc cgtctaccgg atcgcccgcg agctgctccg ggctcatgta ctccggggtg
      361 cccaccacga agccggtctt ggtgaccttc tgcgcgccgc cgtccgcgcc caccgccttg
      421 gcaatgccga agtccaccac cttcacggtg tcccgccccc gggcggtggt caccatgatg
      481 ttgtcgggct tgagatcgcg gtgcacgatt ccgagatcgt gggctacctg gagcgcgtcg
      541 gcgcactggg tgatgatgct ggcggctcgc gggatgggga gggtgtggct ctcgtccaga
      601 atggagttga ggctccgccc ctcgatgaac tccatcgcga ggtagatgag cccctccggc
      661 gtctcgccga aatcgtagat ggcgcagacg ttgggatggc cgatccggct ggcgttggcc
      721 gcctcccggt tgaagcggct gatcgcgtcc gggtccttca tcatggcggg cgacatgatc
      781 ttgatggcgc agcgccggcc catcttcaca tgctctgcga gatagacctg gcccatcccg
      841 ccttcaccca gcttcttctg gatgtgatag cggtccgcga tcacctggcc gacgagatcg
      901 gcggtctgtc cgcctgaagg acgcagcggc gttccgtcct tctgacagaa gaggacctcg
      961 tcgccgtact cctgaccgca ggcggtgcag accttcatcc gatctccgcc cgaagcatct
     1021 ggtcacccac caggagccgc gcgttgggac tcacccggcg ctcaccccgc accgccaccg
     1081 ctaccccatt gcggctgccc gcatcgagca gcacgaaatc ggcgtcttcg ctgcggatga
     1141 gcgcgtgcag cgcgctcatg gaggagtcat agggaaactg ccagtcgccc tgctcccgcc
     1201 cgatgcgggt cgaccggccc ggcgagagat gcagtatgtc gcgggcgctg ccatcggcgc
     1261 ggatctgcgc gaggttggcg atatcggccg ccggtgcgag gctgccgagc cgccgggtct
     1321 ggtcctgctc cggcggacgc gggccgggat agcccagccg gcggaagcgg atgatctggc
     1381 tgccgagcag gatcgcgtcg ccatcggtga ggcggtgggc ctcgtcgagg tagagccagg
     1441 tgccgttctt gctccccagg tcccggaccg tcaggatccc gtccacgaag aggaattgcg
     1501 cgtggagcgg cgagaggtac tcgtcgtccg ggaagttgat gtccgcgccc tgccggccga
     1561 cggtcgtgac cgcgttctcc accggaaagc gatgggcgac gttgccggtg cggtcgagca
     1621 gggccagatg gggcgtgatc ttggaagcgc ggggcggcgc gggcaccttg gcctgcggcc
     1681 cggtatcacc ggtcgaagcg ccacaggcgg gacagaactt ggtgcccttc tcattgagcc
     1741 gtccgcaccg gctgcaggcg tgggccgccc ggacctgggt gagac
//
LOCUS       DATIFF010000589         1583 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_75368, whole genome shotgun sequence.
ACCESSION   DATIFF010000589 DATIFF010000000
VERSION     DATIFF010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75368"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1386
                     /locus_tag="VLD58_08870"
     CDS             <1..1386
                     /locus_tag="VLD58_08870"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSB54456.1"
                     /translation="VLTVALLAGCSGERTHPELVESLAAQRPARTDSDPVSSSRRTAI
                     VEASQRVSPAVVSITVTSRRHAAPQTPFDFFFLPPSPSEQQSFGTGFIIRSDGVILTN
                     QHVVSGAEKIIVTLFDGTDVPANLVGEDAVTDIAVVRIERKSLPVVNTGKSTDLMIGE
                     WVVALGNPFAYLLGNAEPTVTAGVVSAVHRNILPGRDQSGLYLDMIQTDAAINQGNSG
                     GPLANALGEVIGVNSSILSSSGGSIGLGFAIPIERALRVAEELLSHGSVRRAWTGIDV
                     AGPENLAEWKSQGGALVSNVVPQGPGDVGGLKRGDVLTRANDRALRNYLDWEAVKLDL
                     AVGDPVRLVFRRDDRERSVTLKSGDLPTTAAMKVTVLKDLELVTLTAQVRAERNVQSE
                     QGALIFSISKALSQATGLVQGDVIVGMNRRRIATADEVRAVIEALRSGQQIRIFLERA
                     GQIVYTDLELR"
     gene            1383..>1583
                     /locus_tag="VLD58_08875"
     CDS             1383..>1583
                     /locus_tag="VLD58_08875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HSB54457.1"
                     /translation="MTDERYRSPLGTRYASPAMQRLWGETYRIGLWRRVWLALAESEK
                     ELGLDIPDAALAEMRAHLDDADL"
BASE COUNT          262 a          527 c          556 g          238 t
ORIGIN      
        1 gtcctcaccg tggccctcct cgccggctgc agcggggagc ggacccatcc cgagctggtg
       61 gaatcgctcg cggcccaacg tcccgccagg accgacagcg atccggtgtc ctcctcccgg
      121 cggaccgcga ttgtcgaggc ctcgcagcgg gtttcgccgg cggtggtgtc gatcaccgtg
      181 accagccggc gccacgcggc gccgcagacc cccttcgatt tcttcttcct gcccccgtcg
      241 cccagtgagc agcagagttt cggcaccggc ttcatcatcc ggagcgacgg cgtcattctc
      301 accaaccagc acgtggtgag cggggcagaa aagatcatcg tgactctctt cgacgggacc
      361 gatgtcccgg ccaacctggt cggcgaggat gcggtcaccg acatcgccgt ggtccggatc
      421 gagcggaaga gcctcccggt ggtgaacacc gggaagagca ccgacctcat gatcggcgag
      481 tgggtcgtcg ccctcggcaa tccgttcgcc tatctcctcg gcaacgcgga gccgacggtg
      541 acggccgggg tggtgagcgc agtccatcgc aacatcttgc cgggacggga tcagtcggga
      601 ctctacctcg acatgatcca gaccgacgcc gccatcaacc agggcaactc cgggggacca
      661 ctcgccaatg cgctgggaga ggtgatcggg gtcaactcct cgatcctttc ctcgagcggt
      721 ggctcgatcg ggctggggtt cgccattccc atcgaacggg cactccgggt ggccgaggag
      781 ctgctgagcc acgggtcggt gcggcgggcg tggaccggaa tcgacgtggc cggtccggag
      841 aacctggcgg agtggaagtc gcagggcggc gcactggtgt cgaacgtggt gccgcagggt
      901 ccgggcgacg tcggcgggct caagcggggc gacgtgctga cccgcgccaa cgaccgggcg
      961 ctccgcaact acctcgactg ggaagcggtg aagctggatc tcgcggtggg cgacccggtg
     1021 cggctggtgt tccggcgcga cgaccgggag cggagcgtca ccctcaagag cggcgacctg
     1081 cccaccaccg cggctatgaa ggtcacggtg ctcaaggatc tcgagctggt gacgctcacc
     1141 gcgcaggtgc gggccgagcg gaacgtccag tccgaacagg gagccctgat cttcagcatc
     1201 tcaaaggcgc tttcccaggc caccgggctg gtgcagggcg acgtgatcgt ggggatgaac
     1261 cggaggcgga tcgcgaccgc cgacgaagtg cgcgccgtca tcgaggcgct caggagcggg
     1321 cagcagatcc ggatcttcct cgaacgcgcg ggacagatcg tctataccga cctggaactc
     1381 cgatgaccga cgagcgctac cgttcgccgc tgggcacccg atacgcctct cccgcgatgc
     1441 agcggctgtg gggcgagacg taccgcatcg ggctctggcg ccgggtctgg ctggcgctgg
     1501 cggagagcga gaaggaactc gggctcgaca tccccgacgc ggcactggcc gagatgcggg
     1561 cccacctcga tgacgccgac ctc
//
LOCUS       DATIFF010000590         1295 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2075448, whole genome shotgun sequence.
ACCESSION   DATIFF010000590 DATIFF010000000
VERSION     DATIFF010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2075448"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..507
                     /locus_tag="VLD58_08880"
     CDS             <1..507
                     /locus_tag="VLD58_08880"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HSB54458.1"
                     /translation="VYDEAKRFAEAMTMAYHRYHGIDTRIVRIFNTYGPRMRARDGRV
                     VSNFVVQALQGAPLTIYGDGQQTRSFCYVSDLIEGIYRLFRSDHTDPTNIGNPHEFTV
                     RQLAELVLRLTGSSSVIEAHPLPTDDPKVRRPDITKARRLLGWEPVVELEEGILRTIG
                     YFRGRLPA"
     gene            504..>1295
                     /locus_tag="VLD58_08885"
     CDS             504..>1295
                     /locus_tag="VLD58_08885"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSB54459.1"
                     /translation="MTRILLTGAAGFIGSHLAERLLAGGDEVVGIDNFDPFYARAVKE
                     ANLAAARQDPRFSFHEMDINDAAALRRLLTADTVIVHLAAKAGVRPSLRDPAGYLRAN
                     LGGTQAVIDAAREAGVSRIVFGSSSSVYGDDTAPPFREDAPAVHPISPYAATKRAAEL
                     ILEALAPHCGFRAAALRFFTVYGPRQRPDLAIHTFTRRMLAGEPITMFGEGTEARDYT
                     YIDDILAGVAAAIEWTRTAPVGLEPFNLGGNETIPLARMIDTIARA"
BASE COUNT          194 a          461 c          432 g          208 t
ORIGIN      
        1 gtgtacgacg aggccaagcg cttcgccgag gccatgacga tggcctatca ccggtatcac
       61 gggatcgaca cccgcatcgt ccgcatcttc aacacctacg gcccgcggat gcgcgcccgc
      121 gacggacgcg tggtgtcgaa cttcgtggtg caggcgctgc agggggcgcc gctcaccatc
      181 tacggggacg gccagcagac ccgctcgttc tgctacgtct ccgatctcat cgaggggatc
      241 taccgtctgt tccgttccga tcacaccgac ccgaccaaca tcggcaaccc gcacgagttc
      301 acggtgcgcc agctcgccga gctggtgctt cgcctcaccg ggtcgtcctc ggtcatcgaa
      361 gcgcacccgc tgcccacgga tgatcccaag gtccggcggc cggacatcac caaggcgcgc
      421 cggctgctgg gttgggagcc ggtggtggag ctggaggagg ggatcctccg gaccatcggc
      481 tatttccgcg gccggctgcc tgcatgaccc ggatcctgct gaccggtgcc gccggcttca
      541 tcggctcgca cctggccgag cggctcctgg ccggcgggga cgaggtggtg gggatcgata
      601 atttcgatcc cttctacgcc cgggccgtga aagaggcgaa tctggcggcg gcccgccagg
      661 atccgcgctt ctcgtttcac gagatggaca tcaacgacgc ggcggcactc cgccggctgc
      721 tgacggccga cacggtgatc gtgcatctcg cggccaaggc gggggtgcgt ccctccctcc
      781 gggatccggc cggctatctc cgggccaacc tcggcgggac ccaggcggtc atcgatgccg
      841 cccgggaggc cggggtgagc cggatcgtct tcggctcctc ctcctcggtc tacggtgacg
      901 acaccgcgcc cccgttccgc gaggacgctc ccgccgtgca cccgatctcg ccctacgccg
      961 ccaccaagcg ggcggcggag ctgattctcg aggcactggc gccgcactgc ggcttccgcg
     1021 cggcggcact ccgtttcttc accgtgtacg ggccgcggca gcgacccgac ctcgccatac
     1081 acaccttcac ccgccggatg ctcgcgggcg agccgatcac gatgttcggg gaagggaccg
     1141 aggcgcggga ctacacctat attgatgaca ttctggcggg agtggccgcc gcgatcgagt
     1201 ggaccaggac cgcgccggtg ggccttgagc cgttcaacct gggtggcaac gagaccatcc
     1261 cgctggcgcg gatgatcgac acgatcgccc gggcg
//
LOCUS       DATIFF010000591         3770 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_843392, whole genome shotgun sequence.
ACCESSION   DATIFF010000591 DATIFF010000000
VERSION     DATIFF010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3770
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_843392"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..878
                     /locus_tag="VLD58_08890"
     CDS             <1..878
                     /locus_tag="VLD58_08890"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HSB54460.1"
                     /translation="AYHQGALEFQRQVERLSNGRLKVEVFANAQLGNDRAQTEALQLG
                     TIDFTSMSSTTLAGTVPLLQVGDLPFIFRDFKHVDRVLDGPIGEEFVKQFAGKGFKPI
                     AWWEIGFRHHTNSKRSVRVPDDVRGLKLRTLTNPIHQRAWQLLGAQVTPMDFQEVYSA
                     LQQGVVDGQDNPLNIIGTSRLYEVQKYISLTSHIFSASPFLVSDSIWGKLSPEEQKIV
                     TEAAKLSAVRERQAARGLDDEWLKTVESKGMQVERNPDRDQFAAKMKPVWDEYASKYG
                     PPGAKLLELLIGSRQ"
     gene            928..1722
                     /locus_tag="VLD58_08895"
     CDS             928..1722
                     /locus_tag="VLD58_08895"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSB54461.1"
                     /translation="MRDMRFVGKVALVTGAGGGLGGVYAGALAREGATVVAVDRRAEA
                     VETAAATIRAAGGKCRAMTAELTDPEAVDRMVAVTLEGYDRLDILINNAGGGSSTAKN
                     AGSLEEEGPASWAELVDGNLKSAFLCTRAAARPMKRQRYGKIVNISSRSARITDPSVH
                     QSPAYACAKTAVLCLTRFAARELGPFNITVNCLVPSLTLSGPVLQAYWDRMTPAAQAR
                     FLDQVALGRLPRPEELASAVLFLASDESSYITGVALDCNGGSFMPA"
     gene            1871..2800
                     /locus_tag="VLD58_08900"
     CDS             1871..2800
                     /locus_tag="VLD58_08900"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSB54462.1"
                     /translation="MKARSDQAHEYPTKPVRLLVPFPTGGSTEFTALTLGAQLQKLLG
                     QPFVVENRVGDVGIVALREIVDADGYTLLVGSVNTNSIAPVLFKRKIDFDYDNKIVPV
                     SRLAEFPSMLVTRASVPAATVQEFIAHARKGWGKIRNGTDWIGSYPDIDALMMAQAGG
                     FDVVNIAREGGADALLAALIANDIDMLFLNARTAGRAIRAGGIKALAVTGPDRLAAFP
                     NVPTMEECGFKGIGTSHWHGLFVSSAVPADIVGLLHGAVRRALQTEEAQAAFGNAGAR
                     VVPSPSPAQFAAEITAEMAQWRKVAERMALPVA"
     gene            2896..3369
                     /locus_tag="VLD58_08905"
     CDS             2896..3369
                     /locus_tag="VLD58_08905"
                     /inference="COORDINATES: protein motif:HMM:NF012417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSB54463.1"
                     /translation="MATDPKAGTPPPPATKTQGAIKAGNGRYCFELARLQAIDAGPGY
                     STAHGPVVEGERIQIGLMRMPKGTGGRPHSHPNEQWVYVVQGTLECEIAGVRSRASAG
                     SLIYMPANAVHWALATVDEDVIFLTAKDMSHGIVGTPVDTSISAPLYAPGFEPKQ"
     gene            3446..>3770
                     /locus_tag="VLD58_08910"
     CDS             3446..>3770
                     /locus_tag="VLD58_08910"
                     /inference="COORDINATES: protein motif:HMM:NF014215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HSB54464.1"
                     /translation="MSEVTSEIRDGMRIAWEVPIPVDDGLVLKADVYRPVAEGRYPVL
                     LSYGPYGKGLLFEDLYTDQWRRMVEKHPEVLAGSTNKYQNWEVVDPEKWVPDGYACVR
                     VDSRGA"
BASE COUNT          628 a         1254 c         1351 g          537 t
ORIGIN      
        1 gcgcctatca ccagggagcc ctggagttcc agcgacaggt cgagcggctc agcaacggcc
       61 ggctcaaggt cgaggtcttc gcgaacgccc agctcggcaa cgaccgggct cagacggagg
      121 ccctgcagct cggcaccatc gacttcacct cgatgagctc gaccacgctc gccggcaccg
      181 tccccctgct gcaggtgggc gatctgccat tcatcttcag ggacttcaag catgtcgatc
      241 gggtcctgga cggaccgatc ggcgaagagt tcgtcaagca gttcgccggc aaggggttca
      301 agccgatcgc ctggtgggag attggcttcc ggcatcacac gaactccaag cggtccgtgc
      361 gggtgccgga tgatgtgcgc ggcctgaagc tccggacgct gacgaacccc atccaccagc
      421 gggcctggca actgctgggc gcccaggtga cgcccatgga tttccaggag gtttacagcg
      481 cgctgcagca gggggtcgtg gacgggcagg acaaccccct gaacatcatc gggacgtccc
      541 ggctgtacga ggtccagaag tacatctccc tgacctccca tatcttctcg gcctcgccgt
      601 ttctcgtgag cgacagcatc tggggcaagc tctcgccgga ggagcagaag atcgtgacgg
      661 aggcggccaa gctttccgcc gtgcgggagc gacaggcggc cagggggctg gatgatgagt
      721 ggctgaagac cgtggagagc aaggggatgc aggtggagcg gaacccggac cgggatcagt
      781 tcgcggccaa gatgaagccg gtctgggacg aatacgcgtc gaaatacggc ccgccgggcg
      841 ccaagctgct ggagctgctc atcggcagcc gccagtaggc cggagacccg acgcgggagc
      901 ggcggcccgg ggtcaggagg gggggttatg cgcgatatgc gcttcgtggg gaaggtggcg
      961 ctcgtcacgg gggcgggcgg aggtctgggt ggcgtctacg ccggcgccct cgcgcgcgaa
     1021 ggggcgacgg tcgtggccgt cgatcggcgt gccgaggcgg tcgagacggc cgcggcaacc
     1081 atccgggcgg ccggcggcaa gtgccgcgcc atgacggccg agctcaccga ccccgaggcg
     1141 gtggaccgga tggtcgccgt caccctcgag gggtacgatc gcctcgacat tctcatcaac
     1201 aacgccggcg gcgggtcgtc cacggcgaag aatgcgggga gcctcgagga ggaggggccg
     1261 gcctcgtggg ccgagctggt ggacgggaat ctcaagagtg ccttcctctg cacccgcgcg
     1321 gctgcccggc cgatgaagcg gcagcgctac gggaagatcg tcaacatctc ctcccgctcc
     1381 gcccgcatca ccgatccgtc cgtgcatcag tcgcccgcct acgcctgcgc caagacggcg
     1441 gtgctctgcc tgacgcggtt cgcggcgcga gagctcggcc cgttcaacat caccgtcaac
     1501 tgtctcgtcc cgagcctcac cctcagcggg ccggtgctcc aggcctactg ggatcgcatg
     1561 accccggctg cccaggctcg cttcctcgac caggtggcgc tcgggcgtct gccccgtccc
     1621 gaggagctgg cgtcggcggt cctgttcctc gccagcgacg agagcagcta catcacgggc
     1681 gtcgccctgg actgcaacgg gggatcattc atgccggcat agcgcctgac cgatagcaga
     1741 gcacggtccc gcctccgctg gggccggcgc ggctgggaca gagggcgcgg cgtctcgtgg
     1801 ccgccggcga gcatcggcac ggggtggtcg agcacggcag gtggtcgcga gtgccgagag
     1861 ggaggcaaag atgaaggcga ggtcagacca ggcgcacgag tatccgacga aaccggtgcg
     1921 gctcctcgtg ccgtttccca ccggcgggtc cacggaattc acagccctga cgctcggcgc
     1981 gcaactgcag aagctcctgg ggcagccgtt cgtcgtcgag aacagggtcg gcgacgtcgg
     2041 gatcgtggcc ctgcgcgaga tcgtggacgc cgatggctac accctgctcg tcggcagcgt
     2101 gaacacgaac tccattgccc cggtcctttt caagcggaag atcgatttcg actacgacaa
     2161 caagatcgtc ccggtctccc ggctggcgga gtttccgagc atgctggtga cccgggcctc
     2221 cgtgcccgcc gccacggtcc aggagttcat cgcccatgcg aggaagggct ggggcaagat
     2281 ccggaacggc acggactgga tcggaagtta ccccgacatc gacgcgctca tgatggcgca
     2341 ggccgggggc ttcgacgtgg tgaacatcgc cagggagggc ggggcggacg ccctgctcgc
     2401 ggcgctcatc gccaatgaca tcgacatgct cttcctgaac gcccggaccg cgggccgcgc
     2461 catccgggcc ggcggcatca aggccctggc ggtgaccggg cccgatcgcc tggcggcctt
     2521 cccgaacgtt cccaccatgg aagagtgcgg gttcaagggc atcggcacga gccactggca
     2581 cgggctcttc gtctcgagcg ccgtcccggc ggacatcgtg ggcctgctcc acggggccgt
     2641 ccgccgggcg ctgcagacgg aggaggcgca ggccgccttt ggaaacgccg gggcacgggt
     2701 cgtcccgagc ccatcccccg cacagttcgc cgcggagatc acagccgaga tggcccagtg
     2761 gcggaaggtg gccgagcgca tggcgctccc ggttgcctag ccgcagccgg ccgcaggcgg
     2821 cgcgagcgtt cctccgcgct gcggccggca ggctcgtgag gcgttgacgc cgacacgacg
     2881 aggaggacag ggaacatggc gacagatccg aaggctggca cccctccacc accggcgacc
     2941 aagacccagg gggccatcaa ggccggcaac ggccggtact gcttcgagct ggcccggctc
     3001 caggcaatcg acgccggccc gggctactcg acggcccacg gacccgtcgt cgaaggcgag
     3061 cgcatccaga tcgggctcat gcgcatgccg aaggggacgg gcggacgccc tcacagtcac
     3121 ccgaacgagc agtgggtcta cgtcgtccag gggacgctcg agtgcgagat agcgggcgtg
     3181 cgctcgcggg cctcggccgg gtcgctgatc tacatgccgg ccaacgcggt gcactgggcg
     3241 ctggcgacgg tcgacgagga cgtcattttc ctgaccgcca aggacatgtc gcacggcatc
     3301 gtcgggacgc cggtggacac atccatctcc gccccgctgt acgcgcccgg cttcgagcca
     3361 aagcagtagc cgccgcgccg cctggcgggc acgccgggcc cggggcgcgc gccgagctaa
     3421 gggtggcctc accctgggag cgaccatgag cgaggtgacg agcgagatcc gggacgggat
     3481 gcggatcgca tgggaggtgc ccattcccgt ggatgacggc ctcgtgctca aggcggacgt
     3541 ctaccggccg gtcgccgagg gccggtatcc cgtcctcctg tcgtacggac cgtacggcaa
     3601 gggcctcctg ttcgaggacc tgtataccga ccagtggcgc cgcatggtgg aaaagcaccc
     3661 cgaggtgctg gccggctcga ccaacaagta ccagaactgg gaggtggtgg accccgagaa
     3721 gtgggtgccg gacggctacg cctgcgtgcg ggtcgactcc cgcggcgcgg
//
LOCUS       DATIFF010000592         1826 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_230063, whole genome shotgun sequence.
ACCESSION   DATIFF010000592 DATIFF010000000
VERSION     DATIFF010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1826
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_230063"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1115)
                     /locus_tag="VLD58_08915"
     CDS             complement(<1..1115)
                     /locus_tag="VLD58_08915"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSB54465.1"
                     /translation="MGTLFAAQVCGSAGHSIGMAVGGIMAAEITGTNAWTGLPIAVGA
                     LGTALASWPLAAFMSRAGRRPGLVLGYGLAVGGAALGMGGVLLHSFPLLLLGMALFGI
                     ANTSNLLARYAAADVSPGARRGQAMGLIIWGSTAGSIIGPNLMGLAVQVGRPFGLSSA
                     GSAFLISLTGYSVASLMVWILLRPDPLAIARLIHDRGPVSRLAERARSLGEILRDPRV
                     RIALGTLMSSQLVMIGTTSTSPVHLHDHGHHVHTIGLAVSSHLGGMYVASPLSGWLCD
                     RFGRLPMIGLGSLVLIGAVTVAGLAPGSESGLIMLGLFLNGIGWNLAFVAGSALLTDA
                     LSPAERTSIQGMSDLIMGLMGAFGSAAGGMVLGAWGFP"
     gene            complement(1169..1606)
                     /gene="msrB"
                     /locus_tag="VLD58_08920"
     CDS             complement(1169..1606)
                     /gene="msrB"
                     /locus_tag="VLD58_08920"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HSB54466.1"
                     /translation="MAKTPAGKTFEIVKSEEEWRAQLTPEQFRVLRQHGTERAGTSPL
                     DKEYGPGTYRCTGCGLSLFSSDTKFDSGTGWPSFWAPLEDAVGTTTDRSFFMVRTEIH
                     CRRCGGHLGHVFDDGPAPTGLRYCMNGAALSFVPPREDRAITG"
BASE COUNT          305 a          649 c          621 g          251 t
ORIGIN      
        1 ggaaaacccc aggcccccag caccatgccg ccggccgcgc tgccgaacgc gcccatgagg
       61 cccatgatga gatcggacat gccctgaatc gacgttcgtt cggctggcga aagggcgtcg
      121 gtcagcagcg cgctcccggc cacgaacgcg aggttccagc cgataccgtt caagaagagc
      181 ccgagcatga tcagtccgct ctcgcttccc ggagcgaggc ctgccactgt caccgccccg
      241 atgagcacca gactgccgag cccgatcatc ggcaaccgcc cgaaccgatc gcaaagccag
      301 cccgacagcg gggatgcaac gtacatcccg cccagatggc tcgagacagc cagcccgatg
      361 gtgtgcacgt ggtgcccgtg gtcgtgcagg tggaccggcg acgtcgacgt cgtgccgatc
      421 atcacgagct ggctcgacat gagggtcccg agcgcgatcc gcacgcgcgg gtcccgcagg
      481 atctcaccga gcgaccgagc ccgctcggcc agccgggaca ccggcccgcg atcgtgaatc
      541 agccgcgcga tcgccagcgg gtcgggccgg agcaggatcc agaccatgag cgacgccacg
      601 ctgtagccgg tgaggctgat gaggaaggcg ctcccggccg atgacagccc gaaggggcgg
      661 ccgacctgca ccgcgagccc catcaggttc gggccgatga tcgatccggc tgtcgagccc
      721 cagatgatca ggcccatcgc ctgccctcgt cttgctcccg ggctcacgtc cgctgccgcg
      781 tagcgcgcaa ggaggttcga ggtgttggcg atcccgaaca gggccatccc gagcagcagc
      841 aacgggaagc tgtggagcag cacaccgccc atgcccagcg cggcgccgcc gacggccaga
      901 ccgtaaccga gcaccaggcc aggccggcgc cccgcgcggg acatgaaggc ggccaggggc
      961 cagctcgcca gcgctgtccc gagcgcgccc accgcgatcg gcaagcccgt ccacgcattc
     1021 gtgccggtga tctccgccgc catgatcccg ccgacggcca tcccgatcga gtggccggcg
     1081 ctcccgcaga cctgggccgc aaacagggtg cccatcagcc gagcgcggga ccacgaggcg
     1141 gtgaccgcgc gatcagggag agcgcgcatc atccggtgat cgcgcggtct tcccggggcg
     1201 ggacaaagct gagggcggcg ccgttcatgc agtagcgcag cccggtgggc gccggcccgt
     1261 cgtcgaagac gtggccgaga tgcccaccgc agcggcggca gtggatctcg gttcggacca
     1321 tgaagaagct gcggtcggtc gtcgtcccga cggcgtcctc gaggggcgcc cagaagctcg
     1381 gccagccggt gccgctgtcg aacttggtgt cggaggagaa gagcgacagg ccacatccgg
     1441 tgcaacggta cgtgcccggt ccgtactcct tgtcgagcgg gctcgtgccg gcccgctccg
     1501 tgccgtgctg gcggagcacc cggaactgtt ccggtgtgag ctgcgcccgc cactcctcct
     1561 cgctcttgac gatctcgaac gtcttgcctg cgggtgtctt cgccatcgcg ccctcctgtt
     1621 ccgaaggccc cagcctatca tgcgcggcgc gttccccgaa caccgtcccg gttaagagaa
     1681 ttctcatgcg cgactcacga cggcctcatg gtccgccgct acgctggcca gcgacgagag
     1741 acaggcaggc tcatgagagg ctcgctctgg tgggtgacgg tggggctggc aacgctggct
     1801 ggcgtgatcg tgctggctgc ggggct
//
LOCUS       DATIFF010000593         1063 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_998646, whole genome shotgun sequence.
ACCESSION   DATIFF010000593 DATIFF010000000
VERSION     DATIFF010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_998646"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(146..514)
                     /locus_tag="VLD58_08925"
     CDS             complement(146..514)
                     /locus_tag="VLD58_08925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54467.1"
                     /translation="MSAGARYLVGTAVIALAAMAAGAVVPGSWRPGWWLALGIALVVQ
                     APLGWWLMRSIGTERFLAVWVLGILARLVTVGLTGLVIVPALGWPAAPALLALAGFLV
                     ASLALEGVVSALQHSRAPVR"
     gene            complement(511..741)
                     /locus_tag="VLD58_08930"
     CDS             complement(511..741)
                     /locus_tag="VLD58_08930"
                     /inference="COORDINATES: protein motif:HMM:NF021073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HSB54468.1"
                     /translation="MPDPNRSSGGGPGPARYAGLGIQFAVTILVFVLLGQWADRRFGT
                     AGLFTILGTFVAFGGTLYSLVRSLKQDDRDRR"
     gene            867..>1063
                     /locus_tag="VLD58_08935"
     CDS             867..>1063
                     /locus_tag="VLD58_08935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSB54469.1"
                     /translation="MAATQAVPQDDIRQLERLAGAVTRLRSQVAQRIVGQDEIVEGIL
                     TAVLAGGHALLIGVPGLAKTL"
BASE COUNT          196 a          389 c          352 g          126 t
ORIGIN      
        1 atgtcgatct cgtgctggct ctcctggtgg gagacctgcg cggcgtggaa cgcctcccgg
       61 gtaacgggga tctcctgagc cggggccggt ccggccagca aggtcaggag cagcgcgccc
      121 aatcccgtga atcgcacgaa gccgttcatc gtaccggagc ccgcgagtgt tggagtgcgg
      181 agacgacccc ttcgagtgcc agcgacgcca ccaggaagcc cgccagagcc agcagcgccg
      241 gcgccgcggg ccagccgagg gccgggacga tcacgagccc cgtgagcccg acggtcacga
      301 gacgcgccag gatgcccagc acccagaccg cgaggaaccg ctcggttccg atcgacctca
      361 tgagccacca tcccagcggg gcctgaacca ccagcgcgat gcccagcgcc agccaccagc
      421 cgggacgcca cgaaccgggt acgacggccc cggcagccat cgccgccagg gcgatcaccg
      481 ccgtccccac caggtagcgg gcgcccgcgc tcaccggcga tcccggtcgt cctgtttcaa
      541 gctccgaacc agcgaataca gggtgccgcc gaacgccacg aaggtcccga gaatcgtgaa
      601 caggccggcg gtcccgaacc tccggtcggc ccactgcccc agcagcacga agacgaggat
      661 cgtgaccgca aactggatcc ccaaaccggc atagcgcgcc ggtcctggcc ccccgccgct
      721 ggagcgattc gggtctggca cggcgagaac gtatatcctt gtgaaaaatt tcgcaagcga
      781 taaatcggcc atggaccggg ccccgctgct ggcgcctccg gcgggtccgc gggtaatgtg
      841 caggctaccc cgcaccccgg aagaaaatgg ccgcgaccca agccgtgccg caggacgata
      901 tccgccagct cgagcgcctc gccggcgcgg tcacgcggct ccggagccag gtcgcgcaga
      961 gaatcgtggg ccaggacgag atcgtcgagg ggatcctgac ggcggtcctc gccggtggcc
     1021 acgcgctgct catcggcgtg ccgggcctgg ccaagacgct cat
//
LOCUS       DATIFF010000594         1434 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_382882, whole genome shotgun sequence.
ACCESSION   DATIFF010000594 DATIFF010000000
VERSION     DATIFF010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1434)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1434)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1434
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_382882"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..511
                     /locus_tag="VLD58_08940"
     CDS             <1..511
                     /locus_tag="VLD58_08940"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54470.1"
                     /translation="LDTYKQPVLIETWLPGLEFTVAVIGNGEEARCLPIVGMNFDVLP
                     AGAPPIYGYEAKWLWDTVANPLQLFQCPAQVPAELTRDIETAALAAYRALECRDWCRI
                     DVRCDGAGRPMVVELNPLPGILPDPLDNSCFPKAARAAGMTYDDLIRTVADIAWRRIS
                     GGSLLAEVR"
     gene            511..>1434
                     /locus_tag="VLD58_08945"
     CDS             511..>1434
                     /locus_tag="VLD58_08945"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54471.1"
                     /translation="MRAVILYDGGSDEWSAQDVAAVMANVREVRTALRRAGHEPVLVP
                     VHLGDFRWLTRARKADLVFNLCEGINGKARYEDFVVGALELTGVPFTGCRHWPIAVCH
                     RKYVANTLLAAAGLPVPAFTLAQGNKIPADFPLPAIVKPNAEDASVGIDRDAVCTTRR
                     ALRKRVATMLEHFDEVLVQAYIGGREFNVGFIGDRMLPISEIRFDQMPEGSWPIVTYA
                     AKWHAGSAEDVGTKPVCPAQAPSDLLRRIGAVARQAWMTMAHGEGYGRVDLRVDEHGH
                     PWILEVNPCPDLSSDAGLARMGRAAGWNYDEL"
BASE COUNT          214 a          479 c          531 g          210 t
ORIGIN      
        1 cctcgacacc tacaagcagc cggtgctcat cgagacctgg ctccccggtc tcgagttcac
       61 cgttgcggtg atcgggaacg gcgaggaggc acgctgcttg ccaatcgtcg gcatgaactt
      121 cgacgtgctg cctgcgggcg ccccgccgat ctacggctac gaggcgaagt ggctctggga
      181 cacggtggcc aacccgctgc agctgttcca gtgcccggcg caggttccgg cggagctgac
      241 ccgggacatc gagacggcgg cactggcggc ctaccgggcg ctcgagtgcc gcgactggtg
      301 ccggatcgac gtgcggtgcg acggggcggg acgcccgatg gtggtggagc tcaatccgct
      361 gcccgggatc ctgcccgacc cgctcgacaa ctcctgcttc cccaaggcgg cccgggcggc
      421 aggcatgacg tacgacgacc tgatccgcac cgtggcggac atcgcctggc ggcggatcag
      481 tggcggatcc ctgctggccg aggtgcgctg atgcgggcag tcatcctgta cgacggtgga
      541 agcgacgagt ggtcggccca ggacgtggcc gcggtcatgg cgaacgtgcg cgaggtgcgg
      601 accgccctcc ggcgcgcggg ccatgagccg gtgctcgtgc ccgtccacct gggcgacttc
      661 cgctggctca cccgggcgcg gaaggccgac ctggtcttca acctgtgcga ggggatcaac
      721 ggcaaggccc gctacgagga cttcgtggtg ggcgccctcg agctgaccgg cgtcccgttc
      781 accggatgcc gccattggcc gatcgccgtc tgccaccgga agtacgtggc gaacacgctg
      841 ctcgctgccg ctgggctgcc ggtgcccgcg ttcaccctgg cgcagggaaa caagatcccc
      901 gccgacttcc cgctgccggc gatcgtgaag ccgaacgccg aggacgcgag cgtggggatc
      961 gaccgggatg cggtgtgcac cacgcgccgg gcgctccgga agcgggtggc caccatgctg
     1021 gagcatttcg acgaggtgct cgtccaggcg tacatcgggg gccgggagtt caatgtcggg
     1081 ttcatcggcg accggatgtt gccgatctcc gagatccggt tcgaccagat gcctgagggg
     1141 agctggccga tcgtcaccta cgccgcgaag tggcacgcgg gcagtgccga ggacgtgggg
     1201 acgaagccgg tctgcccggc acaggcgcca tccgacctgc tccggcgcat cggcgccgtg
     1261 gcgcgccagg cctggatgac catggcgcac ggagagggct acggccgggt ggacctgcgg
     1321 gtggacgagc acggccaccc ctggatcctc gaggtgaacc cctgccccga cctgtcgagc
     1381 gatgcgggac tggcgcggat gggccgggcc gccgggtgga actacgacga gctg
//
LOCUS       DATIFF010000595         1114 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_690829, whole genome shotgun sequence.
ACCESSION   DATIFF010000595 DATIFF010000000
VERSION     DATIFF010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_690829"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..782)
                     /locus_tag="VLD58_08950"
     CDS             complement(<1..782)
                     /locus_tag="VLD58_08950"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSB54472.1"
                     /translation="MTEGPWLVTGASGFLGRHLLQEIQGGSPTRRTLALVRDPDEWRR
                     LEWTRSLERVIPLAGSVTETEIWTADPRLDGLAGIFHLAALVRHCHEDAEEVHRTNVQ
                     GTLNMVRLAAACRCRMIFVSTSGTVGCFRRPGISPDEDAPFAEAEISDWPYYRSKLVA
                     ERESRRLADELGVELVIVRPPVLLGPGDHRFRSTNHVTRFLRGKLPFLIRGGMHFADV
                     RDAARALRCAMERPGVRPVYHLPGTVCSIEEFYAMAANAAGRP"
     gene            complement(779..>1114)
                     /locus_tag="VLD58_08955"
     CDS             complement(779..>1114)
                     /locus_tag="VLD58_08955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54473.1"
                     /translation="CGVPVRLDAESEVAELSHEVIDRLREATVATTYHLEAYLSHHPS
                     NGLDAFGLRRAIEERGGRVLESGLRPPADLDPRIAWTLRHQFVHFLEDAGIEENGTER
                     AVREREPVA"
BASE COUNT          175 a          394 c          388 g          157 t
ORIGIN      
        1 ggccgccccg cggcgttcgc cgccatcgcg tagaactctt cgatgctgca cacggtgccg
       61 ggaaggtggt aaaccgggcg gaccccgggg cgctccatcg cgcagcgcag cgctcgggcc
      121 gcgtcgcgca cgtccgcgaa gtgcatcccg ccccggatca ggaacggcag tttgccgcga
      181 agaaatcgcg tcacgtgatt ggtggagcgg aagcgatgat cgcccgggcc cagcagcacc
      241 ggcggccgca cgatcaccag ctcgacgccc agctcatcgg ccagccggcg ggactcccgc
      301 tcggccacca gcttggagcg atagtagggc cagtcggaaa tttccgcctc tgcgaagggt
      361 gcgtcctcat cgggggagat cccgggccgc cggaagcagc ccacggtccc cgaggtggag
      421 acgaagatca ttcggcaacg gcaggcggcg gccaggcgca ccatgttgag ggtgccctgg
      481 acgttggtgc ggtgcacctc ctcggcatct tcgtggcagt gccggaccag cgcggccaga
      541 tggaagatgc ccgccagacc atcgagacgc gggtcggcgg tccagatctc cgtctcggtg
      601 accgaccctg ccagcgggat gactcgctcg agggagcggg tccactccag gcggcgccat
      661 tcgtcgggat cgcgcaccag ggcgagggtc cgccgggtgg gggaaccgcc ctggatctcc
      721 tgcaacaggt gacgcccgag gaatccgctc gcgccggtga ccagccaggg tccctcggtc
      781 acgccaccgg ctcgcgctcc cgcacggccc gctcggttcc gttctcctcg atgcccgcgt
      841 cctccaggaa atggacgaac tgatgcctga gcgtccaggc gatgcggggg tcgaggtccg
      901 cgggaggccg gagcccgctt tccagcacgc gccccccccg ctcctcgatg gcccgccgga
      961 gcccgaacgc gtccagccca ttgctcgggt gatgggagag atatgcctcg aggtgatagg
     1021 tggtggcgac cgtcgcctcg cgcaggcgat cgatgacctc atggctcaac tcggccacct
     1081 cgctctccgc gtcgagccgg accgggacac cgca
//
LOCUS       DATIFF010000596         1207 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1767376, whole genome shotgun sequence.
ACCESSION   DATIFF010000596 DATIFF010000000
VERSION     DATIFF010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1767376"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..745
                     /locus_tag="VLD58_08960"
     CDS             <1..745
                     /locus_tag="VLD58_08960"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSB54474.1"
                     /translation="DWRELNAARLRAGERIGIDWHVSSILGTWGRTSPTYFPSAADVT
                     YGNEAQRALQREYPDRIRCYVTVNPNYTSHAVDEIRRGAEQGMIGLKLAASRRADDPL
                     LDPVIDAAEAHRLPVLHHIWQHRRRDWPSQEASDGVELCRLAARHTGATFILAHIGGG
                     GDWLHSLRVLRDHPNVMIDLSGSGVDGGMLEACLDAVGAGRLLWGADATLCTGWAKLR
                     YLEKLLPGPELELVRWKNAARIFPAGAFA"
     gene            742..>1207
                     /locus_tag="VLD58_08965"
     CDS             742..>1207
                     /locus_tag="VLD58_08965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54475.1"
                     /translation="MIDVNVFVGQYPWRRVPGTSPEAVLASMERVGVLEAWMTHLPSI
                     FWKDPGEGNGWLYRTAEQYPPFRPVPVVHPGLPRWEQDLAEALDRDAPVVRCDPGYLG
                     IAPAGADILRLIAAAGDAGIPILSTVKLEDGRGRHPLDVAPELTPASVRTWVR"
BASE COUNT          172 a          433 c          412 g          190 t
ORIGIN      
        1 cgactggcgg gagctcaacg ccgcccggct gcgggccggc gagcggatcg gcatcgactg
       61 gcacgtcagc tcgatccttg gcacctgggg tagaacctcg cccacctact tcccgtccgc
      121 cgccgacgtc acctacggca acgaggccca gcgggccctt cagcgcgagt accccgaccg
      181 gattcgctgt tacgtcaccg tgaatccgaa ctacacctcg cacgccgtcg acgagatccg
      241 gcggggggcg gagcagggga tgatcggcct caagctcgca gccagccgcc gcgccgatga
      301 cccgctgctc gatccggtca tcgatgcggc agaggcgcac cggcttccgg tactgcacca
      361 tatctggcag catcgccggc gcgactggcc cagccaggaa gcgtccgatg gcgtggagct
      421 ctgccgcctc gccgcgcggc acaccggtgc gaccttcatc ctggcccaca tcggtggcgg
      481 cggcgactgg ctccattcgc tcagggtcct gcgcgaccat cccaacgtga tgatcgacct
      541 gtcaggcagc ggcgtcgatg gcgggatgct cgaggcctgt ctcgatgcgg tgggtgccgg
      601 acgcctgctc tggggcgccg atgcgacgct ctgcaccggc tgggccaagc tccgctacct
      661 ggagaagctg ctgccggggc cggaactgga gctggtccgc tggaagaacg cggcccgcat
      721 cttcccggcc ggagccttcg catgatcgac gtgaacgtct tcgtcgggca gtatccctgg
      781 cgccgggtgc cgggaacctc gcccgaggcg gtcctggcct ccatggagcg ggtgggggtg
      841 ctggaggcgt ggatgaccca tctccccagc atcttctgga aggaccccgg cgaagggaac
      901 ggctggctct atcggaccgc ggagcagtac ccccctttcc ggccggtgcc ggtggtgcat
      961 cccggcctgc cgcgctggga acaggatctc gctgaggcgc tggaccggga tgcgccggtg
     1021 gtgcgctgcg atcccgggta cctcggtatc gcgcccgccg gcgccgatat cctcaggctc
     1081 atcgccgccg ccggcgatgc cggaatcccg atactctcca ccgtgaagct ggaagacggc
     1141 cggggccgcc atccgctcga cgtcgctccc gagcttaccc ctgcctcggt ccgcacctgg
     1201 gtgcgct
//
LOCUS       DATIFF010000597         1709 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_537014, whole genome shotgun sequence.
ACCESSION   DATIFF010000597 DATIFF010000000
VERSION     DATIFF010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1709
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_537014"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..313
                     /locus_tag="VLD58_08970"
     CDS             <1..313
                     /locus_tag="VLD58_08970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54476.1"
                     /translation="SLVAAGLVAIVVLFRSQVGGAYEETGARLDTVACGMGRGAACSE
                     PASPGGGTDGGGQGSDPGNSGHGGGNGNRNNGNGNGNNGNGNGNGGGNGSNGHGGGRG
                     P"
     gene            349..528
                     /locus_tag="VLD58_08975"
     CDS             349..528
                     /locus_tag="VLD58_08975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54477.1"
                     /translation="MRRCSQCGYEHEGAGLSCPLCGQRLPIIWGISDLALRRIGLAIL
                     VPVLVWIVMTRLLGV"
     gene            complement(540..1292)
                     /locus_tag="VLD58_08980"
     CDS             complement(540..1292)
                     /locus_tag="VLD58_08980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54478.1"
                     /translation="MIRLTLLLATLLAPGTGRVSAPPTGEALIARMHQRYAGKWYRTL
                     TFVQTTTLPDGTVETWYEALSTPGKLRIDIAPLDSMHALLFRNDSVYEIRGGKVVHAG
                     PQIHPLMVLGFDVYAQPVAETIRKLQTLKFDLTKVHETTWEGRATYVVGAEPGDTTSP
                     QFWIDKERLYFVRSLEPAPNKPEVTLDTRFGAYRPMGGGWVEMEVVFRANGKVRGKEE
                     YADPEADVTLDPALFEPAPWTPPAWISARQQK"
BASE COUNT          260 a          570 c          605 g          274 t
ORIGIN      
        1 cagcctggtc gcagcggggt tggtggcgat tgtggtgctg ttccgcagcc aggtcggcgg
       61 ggcatacgag gaaaccggtg cgcgtctcga taccgtggcc tgtgggatgg ggcgtggggc
      121 ggcctgcagc gagccggcga gcccgggcgg cgggaccgac ggcggcggcc aggggtccga
      181 tcccggcaac tccggccatg gcggaggcaa cggcaaccga aataacggca acgggaacgg
      241 caataacggg aacggaaacg ggaacggcgg tggcaacggc agtaatggtc acggtggcgg
      301 tcgcgggccc tgagcccgcc gcgaccggcc cggactgagg gtgatgtcat gcggcggtgc
      361 agtcagtgtg gttacgagca cgaaggggcc ggactctcct gcccgctctg cggtcagaga
      421 ctcccgatca tctggggcat aagcgatctg gccctgaggc ggatcggcct cgccattctg
      481 gtgccggtgc tggtctggat cgtgatgacc cggctgctcg gggtgtgagc tcggctcgat
      541 cacttctgct ggcgagctga gatccatgcc ggcggcgtcc agggcgccgg ctcgaagagg
      601 gccgggtcca gggtcacgtc cgcctcgggg tcggcgtatt cctccttgcc ccgtaccttc
      661 ccgttggcac ggaacaccac ctccatctcg acccagccgc cgcccatcgg ccgatacgcc
      721 ccgaaccgcg tgtccagggt cacctccggc ttgttcggcg ccggctccag actgcgtacg
      781 aaatagagcc gctccttgtc gatccagaac tgggggctgg tcgtgtctcc aggctcggcg
      841 ccgacgacgt acgtcgcgcg gccctcccag gtggtttcgt ggaccttggt gaggtcgaat
      901 ttgagggtct gaagcttccg gatcgtctcc gccaccggct gcgcgtacac gtcgaacccc
      961 aggaccatca ggggatggat ctgcggcccg gcgtgcacca ccttcccgcc ccggatctcg
     1021 tacaccgaat cgttgcggaa gagcagcgca tgcatgctgt cgagcggcgc gatgtcgatc
     1081 cgcagcttgc ccggcgtgga cagcgcctcg taccaggtct cgaccgtgcc gtccggcagg
     1141 gtcgtcgtct gcacgaaggt gagagtgcga taccacttgc cggcatagcg ctgatgcatt
     1201 ctggcaatga gcgcttcgcc agtcggcggc gcggacaccc ggcccgtgcc gggagcgagg
     1261 agcgtggcga gcagcagcgt caaccggatc actcggcctc ctggtgttga agtgcaacgc
     1321 gaccggcgac ctacgcaagg cggctgcgct gagtttctcc cacccctggc acggcgctgc
     1381 ccgttggccc agattctgaa tgtcgggcag gctccccgcc agccgcgatg ctcccatcgg
     1441 aggggcgcca atggctgcct ccagcaatga tgaacagcgc caccggcgcc acgcaatctt
     1501 cgacgtccag cggccccccc agccgagtgc tcaggacgcg ccccagtcca gcccgacctt
     1561 acttccggat cgcgccggtg cgggccgggc cgggccgcgg cgcgagggcg ccccgaccgg
     1621 gttgccgggc gcggcccatg atttcgctcg aattccggtg ctcaaccagg ctccgagctc
     1681 ggaggtggct gccgagcgtg aggcggagc
//
LOCUS       DATIFF010000598         1011 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2228944, whole genome shotgun sequence.
ACCESSION   DATIFF010000598 DATIFF010000000
VERSION     DATIFF010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2228944"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(222..>1011)
                     /locus_tag="VLD58_08985"
     CDS             complement(222..>1011)
                     /locus_tag="VLD58_08985"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M20 family metallopeptidase"
                     /protein_id="HSB54479.1"
                     /translation="EGPPPGEKGGADQMLEEGLFKEYHPKAAFALHSFPDLTVGQVGF
                     NSGPSMAAVDQFRIKIHGKQAHGAYPNLGIDPIVTGAEVVVALQTIRSRTLSPLEPSV
                     VTVGIFRGGERFNIIPGEVMLEGTVRTYSQEARDTVQRRMREILDGVTHANGASYDLE
                     YQKNAPATVNDPALTQEVRPLMERILGAGNVKLVEPTMGGEDFGYFAEQVPGFYYRLG
                     VLKPGTTSGGLHTPTFRGDDSAVPVGIRTMSRLLVDYLASQKSH"
BASE COUNT          149 a          356 c          330 g          176 t
ORIGIN      
        1 aacttgtcgt tcggcgaccg gccggtgtgc tgacccgtct cgcaaaccag gggcccctcg
       61 gcggcgaggt acgcctcgcc gcgttgcacc gccagctcgg tcagccgcgc cggcggaagg
      121 ttccagtaca ccgtgcccgc gtcagtgatc ccctgcctgt cgattccaaa gctgctcact
      181 gccggccctt catttttcat tccgcacctc ggaaacaagg ttcagtgtga tttttgagaa
      241 gctagatagt ccaccaggag ccgcgacatc gtgcggatgc ccaccggcac cgcgctgtcg
      301 tccccccgga aggtgggcgt gtgcagaccg cccgaggtcg tgcccggctt gaggaccccc
      361 agccgatagt agaacccggg cacctgctcg gcgaagtacc cgaagtcctc gcctcccatg
      421 gtgggctcca cgagcttgac gttgccggcc cccaggatgc gctccatcag cggccggacc
      481 tcctgggtga gcgccggatc gttgacggtc gccggcgcgt tcttctgata ctccagatcg
      541 taggaggcgc cgttggcatg ggtgacgccg tccaggatct cccgcatccg gcgctggacc
      601 gtgtcgcgcg cctcctggct gtaggtgcgc accgtcccct ccagcatcac ctcgccgggg
      661 atgatgttga agcgctcgcc gccgcggaag atgccgaccg tgacgacgct cggctccagc
      721 ggcgagaggg tgcgggagcg gatcgtctgc agcgccacca ccacctcggc gccggtcacg
      781 atggggtcga tcccgagatt cggataggcg ccgtgcgcct gcttgccgtg gatcttgatc
      841 cggaactggt cgaccgccgc catggacggc ccggaattga agccgacctg gccgacggtc
      901 aggtccggga aggagtgcag ggcgaaggcg gccttggggt ggtactcctt gaacagcccc
      961 tcctccagca tctggtcggc gccccccttc tcgcccggcg gcggcccctc c
//
LOCUS       DATIFF010000599         1884 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1613766, whole genome shotgun sequence.
ACCESSION   DATIFF010000599 DATIFF010000000
VERSION     DATIFF010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1613766"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(120..1223)
                     /gene="hemW"
                     /locus_tag="VLD58_08990"
     CDS             complement(120..1223)
                     /gene="hemW"
                     /locus_tag="VLD58_08990"
                     /inference="COORDINATES: protein motif:HMM:TIGR00539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HSB54480.1"
                     /translation="MHLYLHIPFCARRCSYCDFAIAVRREVPSQAYADALQREWQLWF
                     NDPRWAGFSALTTIYLGGGTPSRLDPSVLAGLLGALTADRPLAPGAEVTLEANPEDVT
                     AERARAWRDAGINRVSLGVQSFEPAVLSWMHRTHTADQPAQAVDALRSAGIDRISLDL
                     IYALPPEAPRDWSKDLDRALALAPDHLSLYGLTVEQHTPLSRWVTRKEAHPVTDDRYA
                     EEFLLAHERLTTVGFRHYEVSNYARPGLEAVHNSAYWTRSPYLGLGPSAHSGLGDQRW
                     WNVREYSAWVEAIGQGVSTVAGEETLDAAALTLESLYLGLRTDTGLPAAAVPESVRVG
                     WVRENWATIQSGQLRLTPEGWLRLDALVAQAAG"
     gene            1385..>1884
                     /locus_tag="VLD58_08995"
     CDS             1385..>1884
                     /locus_tag="VLD58_08995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HSB54481.1"
                     /translation="MAKCAFVLGAVALIPAAASAQQRTEFTPFVASYYGLTHLASGTN
                     PTTGNSFTFDQSNAFAFGGRITLPVGGRLSVEGEFTFATSGVRFTEKDGIAPGLDGGA
                     AQDGNIIYGSVRGVVSPRRSNLYILAGPAIVKRGGDAWKGVKSSDITDFGGVVGFGFR
                     ANVTPR"
BASE COUNT          289 a          622 c          684 g          289 t
ORIGIN      
        1 acggctgccc gggtcatggt ggtcgcagcc tcgtggccgc aagggatcgg tcagatcgct
       61 gagcggcgca cgggctgctc ccccacgacc cggtcagccg tccattcacg ccgcggccct
      121 catcccgcgg cctgggccac cagggcgtcc agccgcagcc agccttccgg cgtgagccga
      181 agttggcccg actggatggt ggcccagttc tcccgcaccc agccgacccg aaccgattcc
      241 ggcaccgccg cggcggggag accggtgtcg gttctgaggc ccaggtatag cgattccagg
      301 gtcagtgccg cggcatcgag tgtctcttcg cccgccaccg tcgaaacccc ctggccgatc
      361 gcctcgaccc aggcgctgta ttcccggaca ttccaccagc gctggtcgcc gagaccgctg
      421 tgggccgaag ggccaaggcc gaggtagggc gaccgggtcc agtaggcgga gttgtgcacc
      481 gcctcgaggc cgggccgagc gtagttgctg acctcgtagt ggcggaagcc gaccgtcgtg
      541 agtcgctcgt gagccagcag gaactcctcg gcgtagcggt cgtcggtgac cgggtgcgcc
      601 tccttccggg tgacccagcg ggagaggggc gtgtgctgct ccaccgtgag gccgtagagc
      661 gagaggtggt cgggtgcgag ggcgagggcc cggtcgaggt ccttgctcca gtcgcggggg
      721 gcctcgggcg gaagggcgta gatgaggtcg agggagatcc ggtcgatgcc ggcgctccgg
      781 agcgcatcca ccgcctgggc cggctggtcg gcggtgtggg tgcggtgcat ccagctgagg
      841 accgccggct cgaacgactg aactccgagc gacacccggt tgattccggc atcgcgccaa
      901 gccctggcgc gctccgcggt cacgtcctcg ggattcgcct cgagcgtcac ctcggcgccg
      961 ggtgccaggg gacgatccgc cgtcagtgcg ccgaggagcc cggcgagcac ggagggatcc
     1021 aggcgcgacg gcgtgccacc gcccaggtag atggtggtca gggctgagaa accagcccac
     1081 ctgggatcgt tgaaccagag ttgccattcc cgctgcagcg cgtcggcata tgcctgcgac
     1141 gggacctcgc gcctgaccgc gatggcgaaa tcgcagtagg agcagcggcg ggcgcagaag
     1201 ggaatgtgaa ggtagagatg cactgcaggg aaaataatcg ggagtcagga gtcaggagcc
     1261 gggcggcggg tggtcagttg acagattgtc ccctctccgc gattctaggc cgtccgacgc
     1321 cgcggtccgc cggggcgtca aatacccatc caagccggga ggtcgtgtgt caggttcgtg
     1381 gtctgtggcg aagtgtgcct tcgtgctggg cgccgtagcg ctgatccccg cggcggcctc
     1441 ggctcagcag cgcaccgagt ttaccccgtt cgtcgccagc tactatgggc tgacccacct
     1501 ggccagcggc accaatccga ccactggcaa cagcttcacc ttcgaccagt ccaacgcgtt
     1561 cgcgttcggc gggcggatca ccctgccggt cggcggacgg ctgagcgtcg agggtgagtt
     1621 caccttcgcc accagcggcg tccggttcac cgagaaggac ggcatcgcgc cggggctcga
     1681 cggcggcgcg gcgcaggacg gcaacatcat ctacggcagc gtccggggtg tggtctctcc
     1741 ccgccggagc aacctctaca tcctcgccgg cccggcgatc gtgaagcggg gcggcgatgc
     1801 gtggaaggga gtgaagagca gcgacatcac cgacttcggc ggcgtggtgg gcttcggctt
     1861 ccgggccaac gtcaccccgc gctt
//
LOCUS       DATIFF010000600         1225 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_231203, whole genome shotgun sequence.
ACCESSION   DATIFF010000600 DATIFF010000000
VERSION     DATIFF010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1225
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231203"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1225
                     /locus_tag="VLD58_09000"
     CDS             <1..>1225
                     /locus_tag="VLD58_09000"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSB54482.1"
                     /translation="ATADPEKAAQPGAAQLHAEVPGNVAFTWTVAGGDAEAAFNSAEV
                     KVSQRIVQQRLLPTAMEARAAVAQYNKGTGQLTLWCTSQNPHIHRFLCSVMLKLPEHR
                     VRVIAPEVGGGFGSKIPVYADEALTAWAAMTLGRPVKWSEDRSENYKATIHGRDHIEY
                     VEMCGTRDGRITGLRTRVYAGLGAYASTAAPGIPTILHGLVYSGAYTIPNIHGVVHGV
                     YTNGTPVDAYRGAGRPEAAYLIERLVDIYARKIEMDPVEVRRRNFIPKDKFPYAVATG
                     LTYDSGNYEAALDKAVGMLDYRSFRNEQEKARRQGRYLGVGVVSYIEICGSGPGQVAA
                     AIGFGGGQYESAIVRVFPTGMVRVYIGASPHGQGEETTFAQIVADEFGYPVENVEIVH
                     GDTDNTPQGWGTYGSR"
BASE COUNT          214 a          422 c          403 g          186 t
ORIGIN      
        1 ccgccactgc cgaccccgag aaggctgccc agccgggcgc cgcccagctc catgccgagg
       61 tccccggcaa cgtcgccttc acctggaccg tggccggcgg cgacgccgag gccgcgttca
      121 actcggccga agtgaaggtg agccagcgga tcgtgcagca acggcttctg cccaccgcga
      181 tggaggcccg ggccgccgtg gcgcagtaca acaagggcac cggccagctc accctctggt
      241 gcaccagcca gaacccccac atccaccgtt tcctctgctc ggtgatgctc aagctccccg
      301 agcaccgggt ccgggtgatc gctcccgagg taggcggcgg cttcggctcc aagattccgg
      361 tctacgccga cgaggccctc acggcctggg cggcgatgac cctcggccgt ccggtgaaat
      421 ggagcgagga tcgctccgag aattacaagg ccaccatcca tggccgggat cacatcgagt
      481 acgtagaaat gtgcggcacc cgggatggcc gaatcaccgg cttgcgcacc agggtgtatg
      541 ccggcctggg ggcatatgcc tccaccgcgg ctcccgggat tcccaccatc ctgcacgggc
      601 tggtctactc gggcgcttac accattccga acatccatgg cgtggtgcac ggggtgtaca
      661 ccaacggcac tccggtggac gcctaccgcg gcgcgggccg ccccgaggcc gcgtatctga
      721 tcgagcgact ggtcgacatc tacgcccgca agatcgagat ggacccggtc gaagtgcgac
      781 gccggaactt cattcccaag gataagttcc cctatgcggt ggcgaccggt ctgacctacg
      841 actccggcaa ctacgaggcg gcgctggaca aggccgttgg gatgctggat taccgcagct
      901 tccgcaacga gcaggagaag gcccggcgcc agggccgtta cctcggggtc ggcgtggtga
      961 gttacatcga gatctgcggc tccgggcccg gtcaggtagc cgccgccatc ggcttcggcg
     1021 gagggcagta cgagtcggcc atcgtgcggg tcttccccac cgggatggtg cgggtctata
     1081 tcggcgcctc gccccacggc cagggcgagg agaccacctt cgcccagatc gtggccgatg
     1141 agttcggtta cccggtggag aatgtcgaga tcgtccacgg cgataccgac aacaccccgc
     1201 agggatgggg cacctacggc agccg
//
LOCUS       DATIFF010000601         1430 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_383569, whole genome shotgun sequence.
ACCESSION   DATIFF010000601 DATIFF010000000
VERSION     DATIFF010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1430
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_383569"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..266
                     /locus_tag="VLD58_09005"
     CDS             <1..266
                     /locus_tag="VLD58_09005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54483.1"
                     /translation="GRWSATALYNVVGRRIAEAGVLPQPDTYEEARHLVDVSLQFPVF
                     GTMSGKLDGKNLLDAPYRLVQGDVLRERYKTGRIFSLGFTWKP"
     gene            391..>1430
                     /locus_tag="VLD58_09010"
     CDS             391..>1430
                     /locus_tag="VLD58_09010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HSB54484.1"
                     /translation="MLKVRNRWLSLAGFALVALAAACSDNSNSPSAPATPTGLAVTQI
                     SLTSVHVAWNAVSGATGYVLERASAANPGVFAAVGGAIATTSYDDAVTAGVAYSYRVS
                     ATDGSKTSAASGAVTFTTGVQQATLTGNIAASRTLYKDTVYTLSGYVKVQSGAVLTIQ
                     AGTRIVGDSTVLGSSLWILRGARIDAQGTSTEPIVFTSARSPGNRAPGDWGGIIMIGN
                     GIINRTGATILTEGPAQVSENYAGGNDNNDNSGTLRYVRIEFAGYDVSGGAGQELNAL
                     SSYAVGRGTTYEYIQTMAGLDDSFEYWGGAVDGRYLISYESGDDHFDWTEGYQGRNQF
                     LIALQTQRLVPRP"
BASE COUNT          252 a          479 c          489 g          210 t
ORIGIN      
        1 cggggcggtg gtcggcgacg gcgctctaca acgtggtagg ccggcggatc gcggaggccg
       61 gggtcctgcc ccagcccgac acctacgagg aggcgcggca cctggtggac gtgtcgctcc
      121 agttcccggt gttcggcacg atgagcggaa agctcgatgg gaagaacctg ctggatgcgc
      181 cctaccggct ggttcagggc gacgtgctcc gggagcgtta caagaccggg cggatcttct
      241 cgctcggctt cacctggaag ccgtgaagcc ggcgcggttg acctgattgt gacgggaacg
      301 acgaacagcc gaaacctcgc ggcgttgatt catgggcacc cgaccacagc aaccctgatg
      361 cgggccgaca actctaaccg aggaacatcg atgctcaagg ttcggaacag gtggctttcg
      421 ctcgccggct tcgcgctggt ggcgctggcc gcggcgtgca gcgacaacag caacagcccc
      481 tccgcaccgg cgacgcccac cggcctcgcg gtcacccaga tctccctcac ctcggtgcat
      541 gtcgcgtgga acgcggtgag cggtgccacc ggctatgtcc tggagcgcgc cagcgctgcg
      601 aatccgggtg tctttgcggc ggtgggcggc gccatcgcca ccaccagcta cgacgacgcg
      661 gtgacggccg gggtggcgta cagctaccgg gtgtcggcca ccgacggcag caagaccagc
      721 gcggcctcgg gcgcggtgac attcaccacc ggagtgcagc aggccaccct cacgggcaac
      781 atcgcggcca gccggacgct ctacaaggac acggtctaca ccctgagcgg ctatgtgaag
      841 gtgcagtccg gcgcggtcct gacgatccag gccggcacca ggatcgtagg cgattccacc
      901 gtactcggca gctcgctctg gatcctgcgg ggcgccagaa tcgacgcgca gggcacctcg
      961 accgagccga tcgtcttcac cagcgcccgg agtcccggca accgcgcgcc cggtgactgg
     1021 ggcggcatca tcatgatcgg taacggcatc atcaaccgca ccggcgccac gatcctgacc
     1081 gagggtccgg cccaggtgtc ggagaactat gccgggggca acgacaacaa cgacaacagc
     1141 ggcacgctgc gctatgtccg gatcgagttc gcgggctacg acgtgagcgg cggcgccggc
     1201 caggagctca acgcgctctc gagctacgcg gtggggcgcg gtaccaccta cgagtacatc
     1261 cagaccatgg ccggcctcga tgactcgttc gagtactggg gcggcgcggt ggacgggcgt
     1321 tacctgatct cgtacgagtc gggtgatgac cacttcgact ggaccgaagg gtaccagggc
     1381 cgcaaccagt tcctgatcgc gctccagacc cagcggctgg tgccgcgtcc
//
LOCUS       DATIFF010000602         1381 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_77102, whole genome shotgun sequence.
ACCESSION   DATIFF010000602 DATIFF010000000
VERSION     DATIFF010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1381
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77102"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..362
                     /locus_tag="VLD58_09015"
     CDS             <1..362
                     /locus_tag="VLD58_09015"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012320489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HSB54485.1"
                     /translation="HRDDQALAGMAAQVRRHLADGAPMAQLPLDVGGTAFARQVWNRL
                     RQIPYGETRTYGEIAAAIGRPGAARAVGNACAANPVAVVIPCHRVVKAAGGAGAYRWG
                     ADRKQALLAREASGGSP"
     gene            346..1026
                     /locus_tag="VLD58_09020"
     CDS             346..1026
                     /locus_tag="VLD58_09020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54486.1"
                     /translation="MEARRDSRKEGPLYMALGRGWIPVGIASGLLAAGVAAACTPLGA
                     WLYTDPTFVLNGVTTKYRGAPADTLQLVFTGCNLNDFNVDGLTVQAMLLVNGMPIGAV
                     WSDQKFTLKMRDSADVPVPLQIPRPAGPPVHAKGDGLLDTRYELNGMIELATPIGVRS
                     VKLHQQGDVRFDSAGVPSGWTVRNARPCRPGQSVLPGQGVSPKVYLDTMFKPQLPPSS
                     PPPGQRDF"
     gene            1026..>1381
                     /locus_tag="VLD58_09025"
     CDS             1026..>1381
                     /locus_tag="VLD58_09025"
                     /inference="COORDINATES: protein motif:HMM:NF015272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004833 - tryptophan 2,3-dioxygenase
                     activity [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan 2,3-dioxygenase family protein"
                     /protein_id="HSB54487.1"
                     /translation="MPSREPLTYASYLKVDELLALQRPLSDGPEHDEMLFIVIHQVYE
                     LWFKQVLHELDYLEELLARRDHARAQHTIKRVLTILKVMVAQIDILETMTPLEFLSFR
                     DRLESGSGFQSAQFREL"
BASE COUNT          209 a          499 c          466 g          207 t
ORIGIN      
        1 tgcaccggga cgaccaggcg ctcgccggca tggcggccca ggtccgccgc cacctggccg
       61 acggcgcgcc gatggcgcag ctgccgctcg acgtcggtgg aaccgccttc gccaggcagg
      121 tatggaaccg gctcaggcag attccgtacg gggaaacccg cacctacggt gagatcgccg
      181 cggccatcgg ccgaccggga gccgcccgcg cggtagggaa cgcctgcgcg gccaacccgg
      241 tggcggtggt cattccgtgt caccgggtgg tgaaggcggc cggcggggcc ggcgcgtatc
      301 ggtggggggc ggatcggaag caggcgctgc tcgcgcgtga ggccagtgga ggctcgccgt
      361 gattcccgca aggaagggcc gctgtacatg gcgctgggcc gaggctggat tcccgttggc
      421 atcgcgtccg gcctcctggc cgccggcgtc gccgcggcgt gcacccccct cggcgcctgg
      481 ctctacaccg atcccacctt cgtcctgaac ggcgtcacca ccaagtaccg cggggccccc
      541 gccgacacgc tccagctcgt cttcaccggc tgcaacctca acgacttcaa tgtcgacggc
      601 ctcaccgtcc aggcgatgct gctcgtcaac ggcatgccga tcggcgccgt ctggtccgac
      661 cagaagttca ccctcaagat gcgcgactcg gccgacgttc cggtgccgct ccagattccc
      721 cggcccgccg ggccccccgt gcacgccaag ggcgacggac tgctggacac ccggtatgag
      781 ctgaacggca tgatcgagct ggccacgccg atcggcgtcc ggtcggtcaa gctccaccag
      841 cagggcgacg tgcgcttcga ttcggccggg gtgcccagcg ggtggaccgt tcgcaacgcg
      901 cgcccctgcc ggccgggcca gtcggtgctc ccgggccagg gggtgagccc gaaggtgtac
      961 ctcgacacca tgttcaagcc gcagctgccg cccagttctc ccccgccggg ccagcgagac
     1021 ttctgatgcc gtcacgcgag ccgctgacgt acgcgagcta cctcaaggtg gacgagttgc
     1081 tggccctgca gcggccgctc agcgacggcc cggaacacga cgagatgctc ttcatcgtga
     1141 tccaccaggt gtacgagctc tggttcaagc aggtgctcca tgagctcgat tacctcgagg
     1201 agctgctggc ccggcgcgat cacgcacggg cccagcacac gatcaagcgg gtgctcacca
     1261 tcctcaaggt gatggtggcc cagatcgaca tcctggagac catgaccccg ctcgagttcc
     1321 tctccttccg ggaccggctc gagtccggga gcgggttcca gtcggcccag ttccgggagc
     1381 t
//
LOCUS       DATIFF010000603         1089 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1768532, whole genome shotgun sequence.
ACCESSION   DATIFF010000603 DATIFF010000000
VERSION     DATIFF010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1768532"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            490..983
                     /locus_tag="VLD58_09030"
                     /pseudo
     CDS             490..983
                     /locus_tag="VLD58_09030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005142312.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          180 a          325 c          418 g          166 t
ORIGIN      
        1 ctctcaagtc gctatcaacc agctgcactt aacagtgcag catcgtggct actaataaca
       61 gaccacacat tagcaccatt acatctgcat catcgacggg gaaacccctg gtgtggagga
      121 tgtcccgagt cccgtggaac ctcgggggcg gcccggtgtc aggcgacgtt gttgctgtaa
      181 ctgctcgccg ttgccgggct gctggtcacc cgtgccggcg acccccgccc ttgccgacga
      241 cgaacacgag tgcacgagct cgagctggcg gtcgacgcta agaagccgag aagtggatca
      301 tggagcgaga gagcggtctg cgagccatct catatgcgac gcccccctac agcactgggc
      361 tcgccttgcg cgtcaagcga gatatgactc gatgttgtgg atgcgggacc tgaaggagcg
      421 cgtggcgtac cttcccgact gatcggtcac gaggtgccgg cgcggcaacg ccggtgggaa
      481 ggaacgccga tgttgaaggt agtcgaggac gccgcggggc gcgaggagct ggctgcgggt
      541 ctggacgaga tcgtgcggga gggtgcccgg cggatgctgg ctgtggcgct ggaggcggag
      601 gtggaggcgt acctcgccgc gcacgccggg gagcgggatg aggccgggcg ccggctggtg
      661 gtgcgcaacg ggcacgcgag gccgcggcgg gtgacgacgg cagcgggcgc ggtcgaggtg
      721 cgcgcgcggc cggtggacga ccggcgggtg gacgcggcga gcgggcagcg gcggcggttt
      781 cgttccgcga ttctgccgcc gtggtgccgg cggagtccga aggtgaccga ggtgctccgc
      841 tgctgtacct gcacgggctg tccagcggcg atatcgtgcc ggcgttggag gagttcttcg
      901 ggtcgaaggc cgggctgtcc gcgtcggtga tcacccggct gaccaccgcg tggcaggagg
      961 agcagcgcca gttcgccgag cgcggccgag cactgggtgc acctgaagac ctcgaacccg
     1021 atcccgatcg agtcgacctt cgccaccgtg cggctgagaa ccaaggtcac gaagggcccg
     1081 ggaagccgg
//
LOCUS       DATIFF010000604         3813 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1923085, whole genome shotgun sequence.
ACCESSION   DATIFF010000604 DATIFF010000000
VERSION     DATIFF010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3813
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1923085"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            364..1077
                     /locus_tag="VLD58_09035"
     CDS             364..1077
                     /locus_tag="VLD58_09035"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HSB54488.1"
                     /translation="MAKPSAPVARKTGKAYVRPPRVDSLALETALLQEHSYIPLAFVL
                     SLRSGNQEIADRVAAAVLFEAQRANLSPSFIAAVLMVENTPMDPTAESSVGAVGLMQV
                     MPMHEGGWGCPADLEEIEANICHGARLLHMLLQRTRNTEMALRRYNGCLGRRVTPSCL
                     RYPRRVMRIASGIRRDMLTVPVKVYEIAEAAPPPPPPYLRRASDVEIEPVATPDPVDT
                     LWARLSVLPNPAESISGRQ"
     gene            complement(1127..2392)
                     /locus_tag="VLD58_09040"
     CDS             complement(1127..2392)
                     /locus_tag="VLD58_09040"
                     /inference="COORDINATES: protein motif:HMM:NF013015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54489.1"
                     /translation="MNRTVLYIDPPAFCTTVEGLVAPALRERPVAVAPPGADRATVLA
                     LSTEARIAGVTRGMPVSKARKICPDLIICPPNPRLYARASRALHEILNRYAPIIEPRG
                     YGHAYLDVTGTGRLFGRAIDVAARIDREARERLSLPLAVGAAQNKLVSEAASEVVKRQ
                     GGKAAGRQDEMALLDIPVGNECSFLAPQSVELLPDLDPRIRTRLDDYQLDLIGEIQAI
                     DDVDLAAVFGPPGRLLGAQSRGIDPRPVLPPAVKAEFRAVHTLGNDSNDLPLLHRVLR
                     HLAERLGARLRARKLVARRLTLHLAYTDYATARRSVPLPLAALDAELLQAAKQALTLA
                     LTRTVALRAIGITADRLLEMNLQLDLWGHSDPGQRAGEEPLISKAGIPPLRVARGRDD
                     SALQTAIDRIRTRWGTRGIRVPGSGDING"
     gene            complement(2551..2934)
                     /locus_tag="VLD58_09045"
     CDS             complement(2551..2934)
                     /locus_tag="VLD58_09045"
                     /inference="COORDINATES: protein motif:HMM:NF042735.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSB54490.1"
                     /translation="MPAPTTATIANDLVALCRAGRNLDAIDQLYAADIVSIEPVGSET
                     MPAEMKGRDAVRRKNEWWFDTYEVHRADVHGPYLGEDQFAVSYEYDATDKASGQRVAM
                     TEMALYSVKDGRIVREQFFYHMPGA"
     gene            complement(3020..>3813)
                     /locus_tag="VLD58_09050"
     CDS             complement(3020..>3813)
                     /locus_tag="VLD58_09050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSB54491.1"
                     /translation="FAALPPWLAFEIQILVKTSAAAVLTRTLFPARLAGSSLVIGTAT
                     DPYQPAERKFRLTRSILEALRGWKGLSLSVITKSPLILRDADILAELSQRHEVSVNIS
                     IASVDGPTLRRLEARSPAPHARIRALKGLTDAGIYAGLMVAPVVPGVTDSREQLAAIM
                     AAGKEAGARYVVGAALRLGPAARARFLPHLAREFPELVERYTSRFGQSQSPGQDYIDA
                     LNRRIRLLQQEYGFPVTNGMSGRPRRERLRQAAAIPEVAEQWTLL"
BASE COUNT          564 a         1240 c         1407 g          602 t
ORIGIN      
        1 caatagacga ttctgccgtc atgcttcacg acgccagcta tttgaacact acccggcgga
       61 acaggggttg ccgattgttg cccccgacca gaacgggggt ggcgaatgcg gcgatttggt
      121 atggcgctgt gggcagcgac agtggttggc gcgtccgggt gtggccggca gggtgcggtc
      181 cgtccggtcc cgtcgccggt cgcggctacg cgcaatcgtg ctgctccgcc cgcagccgag
      241 gcggcgaagc cggtggcgcc tcctgtaacg gcaacggcga agcccgctcc ggcatcggtg
      301 aaggtggcgg tcaggccggt agcgaagcct gcggctacca ggcccgcggc cccgacgaag
      361 gtggtggcaa agccctccgc cccggtggcc aggaagaccg ggaaggctta cgtccgtccg
      421 ccgcgggtgg acagtctcgc gctcgagacg gcgctcctcc aggaacattc ctatataccg
      481 ctcgcattcg tgctctcgct tcggagcggc aaccaggaaa tcgcggaccg ggtcgcggcg
      541 gcggtcctgt tcgaggcgca gcgcgccaac ctcagcccga gcttcatcgc cgcggtgctg
      601 atggtggaga acacgccgat ggacccgacc gcggagagct cggtgggcgc ggtgggcctg
      661 atgcaggtga tgccgatgca cgagggcggc tggggctgcc ccgccgacct ggaggagatc
      721 gaggccaaca tctgccacgg cgcgcggctg ctgcacatgc tgctgcagcg cacccggaac
      781 accgagatgg cgctgcgccg ctataacggc tgcctgggcc ggcgggtcac cccctcgtgt
      841 ctcaggtatc cgcgccgggt gatgcggatc gcgtcgggga tccgccgcga catgctgacg
      901 gttccggtca aggtctacga gatagccgag gctgcgccgc cgccgccccc gccgtatctg
      961 cgccgggcga gcgacgtcga gatcgaaccg gtggcgacgc ctgacccggt cgatacgctc
     1021 tgggcgcggc tgtcggtgct tcccaatccg gcggagtcga tctcggggcg ccagtaacag
     1081 gattgatgga ttcctggtgg acgaggggat tgggcgacca atccccttat ccattgatgt
     1141 cccctgatcc tggtacccgg attccgcggg tgccccagcg ggtgcggatg cggtcgatcg
     1201 cggtctgcag ggcactgtca tcccgacccc gagcaacgcg aaggggaggg atccctgctt
     1261 ttgaaatcag gggttcttcc cccgcgcgtt gcccggggtc ggaatgaccc cagagatcga
     1321 gctggaggtt catctccagc agccggtcgg cggtgatgcc gatggcgcgg agcgccacgg
     1381 tgcgggtgag cgccagcgtc agcgcctgct tcgccgcctg gagcagctcg gcatcgagcg
     1441 cggcgagcgg gagcgggacg ctgcgccggg cggtggcgta atcggtgtag gcgagatgca
     1501 gcgtcaggcg gcgggccacc agtttgcggg cccggagccg ggcgcccagc cgctcggcca
     1561 ggtggcgcag gacccggtgg agcagcggca gatcgttgct gtcattgccg agggtgtgca
     1621 ccgcacggaa ctcggccttc acggcgggag gaagcaccgg gcgcgggtcg atcccgcgcg
     1681 actgcgcgcc cagcagccgg ccgggcgggc cgaagacggc ggcgaggtcg acgtcgtcga
     1741 tcgcctggat ctcgccgatc aggtccagct gatagtcgtc gagccgggtg cggatcctgg
     1801 gatcgagatc ggggagcagc tcgaccgact ggggggcaag gaaggagcat tcattaccca
     1861 ccgggatatc gagtaacgcc atttcatcct gccgccctgc cgccttgccg ccctgccgct
     1921 tgaccacttc actcgccgct tcactcacca gcttgttctg cgctgctccc accgccagcg
     1981 gcaggctcag ccgttcacgg gcttcgcggt cgatccgggc cgctacgtcg atggcgcggc
     2041 cgaagagccg gccggtgccg gtcacatcga gataggcgtg gccgtatccc ctgggctcga
     2101 tgatcggggc gtagcggttg aggatctcgt gcagggcccg cgaggcccgg gcgtagagcc
     2161 ggggattggg cgggcagatg atcaggtcgg ggcagatctt cctggccttg ctgaccggca
     2221 tgccacgcgt cacccccgcg atccgcgcct cggtggagag ggccagcacc gtggcgcggt
     2281 cggcgccggg tggcgccacg gcgaccggcc gctcccggag cgcgggcgcg accagtcctt
     2341 ccaccgtggt gcagaacgcg ggggggtcga tgtagaggac ggtgcggttc ataataggca
     2401 ggaggcagga ggccggaggc cggaggcagg aggccggagg caggcggagg ccggagggag
     2461 gaaggacggg gggtatcccg ccctttgctt cccgcctcgc catctcccgc ctgcgccggc
     2521 ctccagcctc cagcctcctg cctccagcac tcacgccccc ggcatgtggt agaagaactg
     2581 ctcccgcacg atccgcccgt ccttcacgct gtagagcgcc atctcggtca tcgcgacccg
     2641 ctggccgctg gccttgtcgg tggcgtcgta ctcgtaactc acggcgaact ggtcctcgcc
     2701 caggtagggg ccgtgcacat cggcgcggtg cacctcgtag gtgtcgaacc accattcgtt
     2761 cttcctgcgg acggcgtcgc ggcccttcat ttcggcgggc atcgtctcgc tgccgaccgg
     2821 ctcgatactc acgatatcgg cggcgtagag ctgatcgatg gcgtccaggt tgcgcccggc
     2881 gcggcagagc gcgacgaggt cgttggcgat ggtggcggtg gtgggggctg gcatggtaga
     2941 tggcggttga gggttggggg tcaagggtcg agggtcgagg gtcaagtcgt actgccctcg
     3001 acccttgacc ctcgacctct tacaacagcg tccactgctc cgccacctcg ggaatcgccg
     3061 ccgcctgacg caaccgttcc cgtcgtggcc ggccgctcat gccgttggtg actggaaagc
     3121 catactcctg ctgcagcagc cggatgcggc ggttgagggc gtcgatgtag tcctggcccg
     3181 gcgactggct ctggccgaag cggctggtgt agcgctcgac cagctcggga aattcccggg
     3241 cgaggtgagg aaggaagcgg gcgcgcgctg cggggccgag tcggagcgcc gccccgacca
     3301 cgtagcgtgc tcccgcctcc ttccccgccg ccatgatggc ggcgagctgt tcccggctgt
     3361 cggtcacgcc cggcaccacc ggagcgacca tcaggccggc gtagatcccg gcgtcggtca
     3421 atcccttgag cgcccggatc cgcgcgtggg gggcgggaga gcgggcctcg aggcggcgga
     3481 gagtcggccc gtcgaccgac gcgatcgaga tgttcaccga cacctcgtgc cgctggctca
     3541 gctcagcgag gatgtcggcg tcgcggagga tcaggggcga cttggtgatg acgctgagac
     3601 tgagcccctt ccagccccgc agcgcctcca ggatgctccg ggtgagccgg aacttccgct
     3661 cggcgggctg atagggatcg gtggcggtgc cgatgacgag cgacgagccg gcgagccgcg
     3721 cggggaacag agtgcgggtg agcaccgcgg cggcgctggt cttcaccagg atctgtattt
     3781 cgaaggcgag ccagggcggt aaggcggcaa agc
//
LOCUS       DATIFF010000605         4373 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_845351, whole genome shotgun sequence.
ACCESSION   DATIFF010000605 DATIFF010000000
VERSION     DATIFF010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4373)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4373
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_845351"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..692)
                     /locus_tag="VLD58_09055"
     CDS             complement(<1..692)
                     /locus_tag="VLD58_09055"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HSB54492.1"
                     /translation="MTRPAGSAPGATVGPTPVGAGNPGPGYEPFDPEYCSDTIGRAVG
                     PIADRYFRATLIGAERLPPAGPALLVANHSGDALPHDAIILDTTLWRRDRMDPLRKVR
                     TVFEPELAFVWWMRPFGIENFWRRCGGVDMTFDNFERLLLRGDRVLYFPEGVPGIGKG
                     FNRRYQLQPFKTSFVLLSARHNVPVYPLYVINAEWVHPFGYTFRPLDWIMQRVFHVPF
                     LPIPIGLLAVIFP"
     gene            complement(694..2385)
                     /locus_tag="VLD58_09060"
     CDS             complement(694..2385)
                     /locus_tag="VLD58_09060"
                     /inference="COORDINATES: protein motif:HMM:NF015094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HSB54493.1"
                     /translation="MTRPDPATHKPRRPRRSPAKFEYMTEGPPPGLVRRAMTANRHLL
                     GLLFGGVGAWVRAQRAEHQAKGLRFLIATIVAALARPFLQKDLVDQPFAFQLRRRLEL
                     LGPTYIKLGQILSLREDILPKAVTDELKHLLSQLPVVPFPTFLELIVRDVGRPIDEMF
                     AWVDPTPLGSASIAQIHRATTVEGDTVVLKVVKPGIRETLTRDALLLRILGRGLQLLF
                     PRYQPRRIINEFVDYTLREVDMRREADNARTFAANFRDTPDIVFPAVYPEYSGSGVLC
                     MEYFEGLRPDEAEAQALPAEARERLVDLGAEAIIRMIYQDGFFHADLHPGNLVILPDT
                     KVGFIDLGMVGRLDGELKRTLLYYYYSLVTGDAENAARYLTAVAQAGRGADPAGFRRE
                     VIEISARWRRAATFEGFSLAQLFLESLSRSAQFGMYFPVELVLMVKALITYEGVGHIL
                     LPGLDVAGVSRRHIRRVFIHQFSPVRIFEEELRGAPDLVDALIKMPMLVTEGLRVLER
                     STRRPKESPFVGLRGTLIAGFCLVAGAVLIAAGGPWPAGAALFAIAFFLAIRRGG"
     gene            complement(2415..3962)
                     /locus_tag="VLD58_09065"
     CDS             complement(2415..3962)
                     /locus_tag="VLD58_09065"
                     /inference="COORDINATES: protein motif:HMM:NF012588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA reductase"
                     /protein_id="HSB54494.1"
                     /translation="MSVPSLLLRKLYTSGSLANDDGGFHFCLKNRLSDATLTRIVGAR
                     VDGAEIPLDSITVSLGDRGVVRAKDVTAERPAPFGLRQVAEIRALTAPLPQGPHEIQF
                     RVEAQPFGSLEISAKDAIPAPGKRRPGVPYDRSGEQDYGAEMIASRQRFVEELTGTKL
                     EHVSHYSFDPAVTRGNIENFTGVAQIPLGFAGPIRINGEHAVGEFMIPLATSEGSLVA
                     SYNRGMKVLNLSGGATCTVVDDCMQRAPVFIFDSAREARYFRSWVQEHIEEIRHEAEA
                     TSHVAKLVYIDTYLAHKFAYLRFNYTTGDAAGQNMVGRATFAACGWIVDHAPGVRKFY
                     LESNFATDKKASYVNLMRTRGKRVTAEAVFLRGVLQEQLRVEPEMLQYHGGVANVGAM
                     LAGVTNNGLHSANAITAMFIATGQDVANVAESSAATLYSEVTASGDFYMSITIPSLIV
                     ATHGGGTGLPTQRECLEALGCHGKGKVNKLAEIIAGTVLAGEISLAAAISSLEWVSAH
                     EAYGRKR"
     gene            complement(4006..>4373)
                     /locus_tag="VLD58_09070"
     CDS             complement(4006..>4373)
                     /locus_tag="VLD58_09070"
                     /inference="COORDINATES: protein motif:HMM:NF019982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSB54495.1"
                     /translation="RAYPEVVDQWRGEISAMSRKALVQALRAVSFRPSLTKHLPEIQT
                     PTLILAGGRDRIAPAKDSLIMAKRLPQARLQVVRGASHGLPIERARNVAALIRRFVRD
                     LRAQRGTKSQFMKGRRLSS"
BASE COUNT          699 a         1477 c         1542 g          655 t
ORIGIN      
        1 ggaaagatca cggcgagcag cccgatcggg atcgggagga acggcacgtg gaacacccgc
       61 tgcatgatcc agtcgagcgg gcggaacgtg tagccgaagg ggtggaccca ctccgcgttg
      121 atgacgtata gcggatacac cgggacgttg tgccgggccg agagcaggac gaagctcgtc
      181 ttgaacggct ggagctggta gcggcgattg aaccccttcc cgataccggg cacgccctcc
      241 gggaagtaga gcacccggtc cccccggagc agcaggcgct cgaagttgtc gaaggtcatg
      301 tccaccccgc cgcaccgccg ccagaagttc tcgatgccga acggccgcat ccaccagacg
      361 aacgccagct cgggctcgaa gaccgtccgt accttgcgca gcggatccat ccggtcgcgc
      421 cgccacaggg tggtatccag gatgatcgcg tcgtgtggga gggcgtcgcc gctgtgattg
      481 gctaccagga gcgcgggccc tgcaggcggg agccgctccg cgccgatgag cgtcgcccgg
      541 aagtagcgat ccgcgatcgg cccgacggcg cgcccgatcg tgtcactgca gtactccggg
      601 tcgaacggtt cgtacccggg cccggggttt cctgccccga caggggtggg gccgacggtg
      661 gcgcccggag cggagccggc aggcctcgtc acctcaacct cctcgccgga tcgccaggaa
      721 gaaggcgatc gcgaacagcg ccgcccccgc tggccacggc cctccggcgg cgatcaggac
      781 cgcgcccgcc acgagacaga acccggcgat cagggtcccc cgaagcccga cgaacgggct
      841 ttccttgggc cgccgggtgg accgctccag gacccgcagt ccctcggtga ccagcatcgg
      901 catcttgatc agcgcgtcca ccagatccgg ggcgccgcgc agctcctcct cgaagatgcg
      961 gacggggctg aactgatgga tgaagacgcg ccgaatgtgc cgccgcgaca cccccgcgac
     1021 gtcgaggccc ggcagcagga tgtggccgac cccctcgtag gtgatgagcg ccttcaccat
     1081 gaggaccagc tccaccggga agtacatgcc gaactgcgcg ctccgggaca gcgactcgag
     1141 gaagagctgc gccagcgaga agccctcgaa cgtggcggcg cggcgccagc gggccgagat
     1201 ctcgatcacc tcgcgccgga accccgcggg atcggcgccc cggcccgctt gggcgacggc
     1261 ggtcagatac cgcgcggcgt tttcggcgtc gccggtcacc agcgagtagt agtagtagag
     1321 cagcgtccgc ttgagctccc catcgaggcg gcccaccatg ccgaggtcga tgaagccgac
     1381 cttcgtgtcg ggcaggatca cgagattgcc ggggtggagg tcggcgtgga agaacccgtc
     1441 ctggtagatc atccggatga tggcctcggc gcccagatcg accagccgct cccgcgcctc
     1501 ggccggcagc gcctgcgcct ccgcttcgtc cggccggagc ccctcgaagt actccatgca
     1561 caggaccccg gagccgctgt actccgggta cacggcgggg aagacgatgt ccggggtgtc
     1621 ccggaagttc gcggcgaacg tgcgggcgtt gtccgcctcc cgccgcatgt ctacctcgcg
     1681 caacgtgtag tccacgaact cgttgatgat ccggcgcggc tggtagcggg gaaacaggag
     1741 ctgcagtccg cggcccagga tccggagcag cagcgcgtcc cgcgtgagcg tctcccggat
     1801 cccgggcttg actaccttga gcactacggt gtcgccctcg accgtcgtcg cgcgatggat
     1861 ctgggcgatc gaggccgacc ccaggggcgt cggatccacc cacgcgaaca tctcgtcgat
     1921 ggggcggccc acgtcgcgca cgatcagctc gaggaaggtc gggaacggca cgaccggaag
     1981 ctggctcagc aggtgcttga gctcgtcggt gacggccttg gggaggatgt cctcccggag
     2041 gctcaggatc tggccgagct tgatgtacgt tggtcccagc agctccagcc gccgccggag
     2101 ctggaacgcg aagggttggt ctaccaggtc cttctgcagg aacggccggg cgagggccgc
     2161 cacgattgtg gcgatcagga accgcagccc cttggcctgg tgctccgccc gctgagcgcg
     2221 cacccatgcc ccgacgccgc cgaacaggag gccgaggagg tggcggttgg cggtcatcgc
     2281 ccggcgcacc agtcccggcg gcggtccctc cgtcatgtac tcgaacttgg cgggggagcg
     2341 ccggggccgc ctgggcttgt gcgtcgcggg gtcgggacgg gtcatcgcgg ccacggtgcc
     2401 gggcgccccc ccgctcagcg cttccggccg taggcctcgt gcgcggagac ccactcgagc
     2461 gacgagatcg cggcggccag ggagatctcg cccgcgagca cggtgcccgc gatgatctcg
     2521 gccagcttgt tgaccttgcc cttgccgtgg caaccgagcg cctcgaggca ctcccgctgg
     2581 gtgggcagac cggtgccacc gccgtgggtc gcgacgatga gcgaggggat ggtgatggac
     2641 atgtagaagt cgccgctggc ggtgacctcg gagtagagcg tcgccgccga gctctcggcg
     2701 acgttggcta cgtcctgccc agtcgcgatg aacatcgccg tgatcgcgtt cgccgaatgc
     2761 aggccgttgt tcgtgacccc ggccagcatg gcgccgacgt tggccacgcc cccgtggtac
     2821 tgcagcatct cgggctcgac ccggagctgc tcctggagca cgccgcgcag gaatacggcc
     2881 tcggccgtga cccgcttccc ccgggtccgc atgaggttca cgtacgaggc cttcttgtcg
     2941 gtggcgaagt tcgactcgag atagaacttc cgcacgcccg gggcgtgatc cacgatccag
     3001 ccgcaggcgg cgaacgtggc ccgcccgacc atgttctgcc cggctgcgtc cccggtcgtg
     3061 tagttgaagc gcaggtaagc gaacttgtgg gcgaggtagg tgtcgatgta gaccagcttc
     3121 gccacgtgcg aggtcgcctc ggcctcgtgc cggatctcct cgatgtgctc ttgaacccag
     3181 ctgcggaagt agcgggcctc gcgggcggag tcgaaaatga agactggcgc ccgctgcatg
     3241 cagtcgtcca ccacggtgca agtggccccg ccggagaggt tgagcacctt catcccgcgg
     3301 ttgtacgacg cgaccagcga cccctccgac gtggcgagcg ggatcatgaa ctcgcccacc
     3361 gcgtgctcgc cgttgatccg gatcggcccc gcaaagccga ggggaatctg ggccacgccg
     3421 gtgaagttct cgatgttgcc gcgggtgacc gccgggtcga aggagtagtg ggagacgtgc
     3481 tccagctttg tgccggtgag ctcctcgacg aaccgctgcc ggctcgcgat catctcggcc
     3541 ccgtagtcct gctcgccgct gcggtcatag ggaacgccgg gacggcgctt gccgggcgcc
     3601 ggaatcgcgt cttttgcgct gatctccagg gacccgaacg gctgggcctc cacccggaac
     3661 tggatctcgt gcggcccctg gggaagcggc gcggtgagcg cgcggatctc cgcgacctgg
     3721 cggagcccga agggcgcggg ccgctcggcg gtgacgtcct tcgcccggac cacgccgcgg
     3781 tcgcccagcg acaccgtgat ggaatcgagc ggaatctcgg cgccatccac ccgcgccccg
     3841 acgatccggg tcagggtcgc gtcgctgagc cggttcttga ggcagaaatg aaagccgccg
     3901 tcgtcgttcg cgagggagcc cgacgtgtag agcttgcgca ggaggagcga agggacggac
     3961 accggaacca ccgagtgagg gaccggtccc aacctagcgc ggcgattatg aagaaaggcg
     4021 cctgcctttc atgaattgac ttttcgtgcc gcgctgggcc ctgagatccc gcacgaaacg
     4081 gcggatcagg gccgcaacgt tgcgggcgcg ctcgatgggg agcccgtggg acgctccgcg
     4141 gactacctgg agccgcgcct gcggcagccg tttggccatg atcagcgagt ccttggcggg
     4201 cgcgatgcgg tcccggcccc cggccaggat caaggtgggc gtctgaatct cggggagatg
     4261 cttggtgagc gagggccgga atgagaccgc ccggagggcc tgcaccagcg cctttcggga
     4321 catcgcgctg atctccccgc gccactggtc cacgacttcc ggataggccc gcc
//
LOCUS       DATIFF010000606         1181 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1461922, whole genome shotgun sequence.
ACCESSION   DATIFF010000606 DATIFF010000000
VERSION     DATIFF010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1181
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1461922"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..232
                     /gene="ssrA"
                     /locus_tag="VLD58_09075"
     tmRNA           <1..232
                     /gene="ssrA"
                     /locus_tag="VLD58_09075"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            324..1010
                     /locus_tag="VLD58_09080"
     CDS             324..1010
                     /locus_tag="VLD58_09080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54496.1"
                     /translation="MFIGHFAVGFASKRIAPRASLAPLLAAPLLADLLWPVFLLLGIE
                     QVSVNPPGGSPYLALRFTSYPWSHSLLMSVVWGVLFGGAYYAITRYGRGAWVVALAVV
                     SHWVLDWVTHIPDLPIAPGGGPVLGLGLWRWPAATLAVELSMFGTGVWLYASGTMARD
                     GIGRFGWWAFVAICLASYAASLAGPPPPSVTALGWTAIGGSIVTLWLAWWIDRHRTER
                     EQRAQSRGLA"
BASE COUNT          151 a          378 c          441 g          211 t
ORIGIN      
        1 tttcgcacct gcgtgagtgg cagcccgcct gaggcggcgc tcacgtatcg caaaatcggg
       61 ctggcgtgat ccggggcccg aacggatcgc gtgagagctg caaagggctt gtcgctgccc
      121 gtggccggtg aagcgccggg gcagtgagac ctcaaagaag cttcacctac gcacgtagtg
      181 gtgacatcgg aagcaggctc ggaccggggt tcgattcccc gcgcctccat gaagcagggg
      241 gaagagggaa gagggaaggg ggaagaggcc ccgcacccgt cccgcttccc ctttctcctt
      301 tcctcccagg agatcctcgc gccatgttca tcgggcactt cgccgtcggc tttgcctcca
      361 aacggattgc gcccagggct tcgctggcac cgctcctggc agcaccgctc ctggcggatc
      421 tcctgtggcc cgtattcctg ttgctgggca tcgagcaggt gagcgtcaat ccaccgggag
      481 ggagtcccta cctggcgctg cgcttcacgt cgtatccctg gtcacacagt ctgctgatga
      541 gcgtcgtctg gggagtgctc ttcggtgggg catactatgc catcacgcgg tacgggcgcg
      601 gcgcgtgggt ggtggcgctc gcggtggtga gccactgggt gctcgactgg gtgacgcaca
      661 ttcccgacct gccgatcgct ccgggaggcg gaccggtgct gggcctcggc ctgtggcggt
      721 ggccggccgc cacgctggcg gtcgagcttt caatgttcgg taccggggta tggctctatg
      781 ccagcggcac gatggcgcgg gacggaatcg ggcggttcgg ttggtgggcg ttcgtggcga
      841 tctgcctcgc ctcgtacgcc gcgagtctgg ccggcccgcc tccgccgagt gtcaccgccc
      901 tggggtggac ggcgatcggt ggcagcatcg tcaccctctg gctggcctgg tggatcgacc
      961 ggcatcggac cgagcgcgag cagcgcgctc agtcgcgcgg gttggcgtaa gctctggtgc
     1021 cggttcgcga ggaggccgcc atcggccggg cggcttgcgt ggctgcgggg ctggcgacgg
     1081 cctggggcgg ggctgcgacg cgaggtgcgg ccgcggtccc ggttgcacgc ggcgcggctg
     1141 cactccagcc accggctgcg gcggccgccg atccgtcggc a
//
LOCUS       DATIFF010000607         1128 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1923618, whole genome shotgun sequence.
ACCESSION   DATIFF010000607 DATIFF010000000
VERSION     DATIFF010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1923618"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1128)
                     /locus_tag="VLD58_09085"
     CDS             complement(<1..1128)
                     /locus_tag="VLD58_09085"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSB54497.1"
                     /translation="MDALAAEEFPEAARILRGDNALPAVCGRVCPQESQCEAKCVRGA
                     KGEPVAIGYLERFVADWAMANAAELPKANLPAASGKWVAVVGCGPAGLTAAGELARSG
                     HAVTIFEALHDTGGVLRYGIPEFRLPKDIIDIEVARLLDLGVTVECNVIIGKTMTIHQ
                     LRDQFDALFIANGAGLPTMLNIPGENLKGVYSANEFLTRVNLMEAGRNPDSATPIIQG
                     RQVAVIGGGNTAMDCVRTARRLGAERALIVYRRSEAEMPARVEEIKHAKEEGVEFAML
                     TAPLGIVGDGEGWVTALRCQKMELGPPDESGRRKPIPVAGSEYDIPVGVAVNAVGTRA
                     NPLLTATAPDLELNQWGNIAVDDGGATSIAGAFAGGDIVRGG"
BASE COUNT          159 a          409 c          375 g          185 t
ORIGIN      
        1 cccgccgcgg acgatgtcgc cgccggcaaa agcgcccgca atgctggtgg cgccgccgtc
       61 gtcgaccgcg atgttccccc actggttcag ctccaggtcc ggagcggtgg cggtaaggag
      121 cggattggcc ctggtgccga cggcattcac cgccaccccg accgggatgt cgtactccga
      181 gccggccacc ggaatgggct tcctgcgccc cgattcgtcc ggcggtccca gctccatctt
      241 ctggcagcgc agcgccgtca cccacccttc cccgtcgccg acgatcccga ggggggccgt
      301 cagcatggcg aattccaccc cttcctcctt ggcgtgcttg atctcctcga cccgggcggg
      361 catctccgcc tcgctccgcc ggtagacgat cagcgcccgt tcggccccga gccgccgtgc
      421 ggtgcggacg cagtccatgg cggtgttccc gccgccgatg accgccacct ggcgcccctg
      481 gatgatcggc gtcgccgagt cggggttgcg ccccgcctcc atcaggttca cccgggtgag
      541 aaactcgttg gccgagtaga cccccttcag gttttccccc gggatgttga gcatggtcgg
      601 cagtcccgcg ccgttggcga tgaagagcgc gtcgaactgg tcgcgcagct ggtggatggt
      661 catggtcttg ccgatgatga cgttgcactc gacagtcacc ccgagatcga ggagccgggc
      721 gacctcgatg tcgatgatgt ccttggggag gcgaaactcg gggatgccgt agcggagcac
      781 cccgcccgtg tcgtggaggg cctcgaaaat ggtgacagca tggccgctgc gggccaactc
      841 cccggccgcg gtgaggccgg ccgggccgca gccgacgacc gccacccact tgccgctggc
      901 agcgggaaga ttggccttcg ggagctccgc cgcattggcc atggcccagt cggccacgaa
      961 gcgctccagg tagccgatgg caaccggctc cccctttgcc ccgcgcacgc acttcgcctc
     1021 gcactggctc tcctgggggc agacccggcc gcagacagca ggcagggcgt tgtccccccg
     1081 gaggatccgg gctgcttcgg gaaactcttc agcggccagg gcatcgat
//
LOCUS       DATIFF010000608         2374 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2077899, whole genome shotgun sequence.
ACCESSION   DATIFF010000608 DATIFF010000000
VERSION     DATIFF010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2374
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2077899"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            153..923
                     /locus_tag="VLD58_09090"
     CDS             153..923
                     /locus_tag="VLD58_09090"
                     /inference="COORDINATES: protein motif:HMM:NF015734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HSB54498.1"
                     /translation="MQFRRPSGSSSELPFLKTIAGRRLVKQSLVVTGCFLVGYLITVF
                     WLFPAPFFSTQHAVPRVIDMGVTQAREKLDAAGLRFRLEDQETDPSVPRNAVVRQDPP
                     PGVVVQPNAVVSLVLSDGPPDVAMPDLAGFPRALAERVIKAAGFQVGRVDTLPSASER
                     GLVVQTRPGPGVGRPAGTAIELVVSSGKADVTVPSVIGFNLNEARSKLAELGLLVGSV
                     SSRPVAGQPASTVLEQRPTAGTRSGRGTKVDLIVAGKS"
     gene            923..1588
                     /gene="rpe"
                     /locus_tag="VLD58_09095"
     CDS             923..1588
                     /gene="rpe"
                     /locus_tag="VLD58_09095"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: protein motif:HMM:NF004076.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HSB54499.1"
                     /translation="MPIRIAPSLLACDLGRLKEQVEAALDGGADWLHVDVMDGRFVPN
                     LTFGAPLIKALRRLTNAPLDVHLMVMEPERYIAEYADLGVQVFTFHPEATVHVQRHLD
                     TIRVRGMLAGLSLNPSSPLSLVEEVVPDLDLLLLMSVNPGYGGQSYIPAVTDKIARAR
                     ALLGRRGSKAALEVDGGITLETIESAWRAGADTFVAGTSVFGQPDIGEAIRGLRRRCT
                     ERV"
     gene            1591..2178
                     /locus_tag="VLD58_09100"
     CDS             1591..2178
                     /locus_tag="VLD58_09100"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HSB54500.1"
                     /translation="MSKQWVFVGAVVFGLMLGGAALVWYTPEVEQVAAGARAPNYRTM
                     DLATGDTVALRDHYKGHVTLVNIWATWCVPCKVEMPSMQRLYDSLSSRGFRIAAVSID
                     QEGPDVVRDFASNLHLTFDLLQDRKGDIQVAYQTTGVPESFLLDTTGIIMKRVIGAHD
                     WASPANLALVHRLLGDAAPVPAGDSATRSSVTGTQ"
BASE COUNT          357 a          808 c          817 g          392 t
ORIGIN      
        1 cagagcctgc tcgagcgtat gaccactttc cgccgcgatc ccgcccccgg cctgccgccg
       61 gagctgctga cccccgaagg ggatctgctg ctcctgccgc agcgtcatgg gaccgacggg
      121 gcctacgccg cgcgcctccg ccgggtcgcg tgatgcagtt tcgccgcccc agcggttcca
      181 gctccgaact cccgttcctc aagaccatcg ccggccggcg gctggtgaag caatcgctgg
      241 tggtgaccgg ctgcttcctc gtcgggtacc tgatcacggt gttctggctc ttccccgccc
      301 cgttcttctc gacccagcac gcggtccccc gggtcatcga catgggggtg acccaggcgc
      361 gcgagaagct cgacgcggcc ggtctccgct tccggctgga ggaccaggaa accgatccct
      421 cggtgccacg gaacgccgtg gtgcggcagg acccgccacc tggcgtcgtg gtccagccca
      481 atgccgtcgt ctcgctggtg ctgagcgatg ggccgcccga cgtggcgatg cccgacctcg
      541 ccggcttccc ccgggccctc gccgagcggg tgatcaaggc ggccggtttc caggtcggtc
      601 gggtggacac cctcccctct gcgagcgagc gcggcctggt ggtgcagacc cgtcccggcc
      661 ctggcgtggg acgtccggcc ggtaccgcca ttgaactggt ggtaagctca ggcaaggctg
      721 acgtgaccgt gccgagcgtc atcgggttca acctgaatga ggcacggagc aagctggcgg
      781 agctgggcct cctcgtcggg tcggtctcga gccggccggt ggccggccag cccgcgagca
      841 cggtgctgga gcagcgtccc accgccggca ccaggagcgg ccggggcacg aaggtggacc
      901 tcatcgtggc cgggaagagc tgatgccgat ccggattgcg ccgagcctcc tcgcctgtga
      961 cctcgggcgg ctcaaggaac aggtcgaggc cgccctggat ggtggggcgg actggctgca
     1021 cgtcgacgtg atggatgggc gctttgtgcc gaacctgacc ttcggcgcgc cgctgatcaa
     1081 ggcgctccgc cggctgacca acgccccgct ggacgtgcac ctcatggtga tggagcccga
     1141 gcggtatatc gccgaatacg ccgacctggg tgtccaggtg ttcaccttcc accccgaggc
     1201 cacggtccat gtacagcggc atctcgacac gatccgggtg aggggcatgc tggccgggct
     1261 ttcgctcaac ccgtcgagcc cgctctccct ggtcgaggaa gtggtgcccg atctcgatct
     1321 cctgctcctg atgagcgtga atcccggcta tggtggacag tcgtacatcc cggcggtgac
     1381 cgacaagatc gcgcgggccc gggccctgct gggccggcgg gggtcgaagg cggcgctcga
     1441 ggtggacggc gggatcacgc tggagacgat cgaaagcgcc tggcgggccg gcgcggatac
     1501 ttttgtggct ggcacctcgg tgttcggcca gcccgatatc ggtgaagcca ttcgcggcct
     1561 gcgtcgccgc tgtacggaaa gagtgtagcc atgtcgaagc aatgggtgtt cgtgggggcg
     1621 gtggtcttcg gactcatgct gggcggtgcg gccctggtgt ggtacacgcc cgaggtggag
     1681 caggtcgcgg ccggagccag ggcgccgaac tatcgcacca tggatctcgc caccggcgac
     1741 accgtcgccc tccgggatca ttacaagggt cacgtgacgc tggtgaacat ctgggccacc
     1801 tggtgcgtgc cctgcaaggt cgaaatgccc tcgatgcagc ggctctacga ttcgctctcc
     1861 tcgcgcggct tcaggatcgc ggcggtcagc atcgaccagg aggggccgga tgtggtccgg
     1921 gacttcgcct ccaacctcca cctgacgttc gacctgctcc aggaccggaa gggcgatatc
     1981 caggtggcct accagaccac cggggtgccg gagagcttcc tgctcgatac cacgggtatc
     2041 atcatgaagc gggtgatcgg cgcccacgac tgggccagcc cggcgaacct ggcgctggtc
     2101 catcggctgc tgggcgacgc ggctccagtg ccagccgggg actctgccac ccgatcctcc
     2161 gttaccggca cacagtaaca acctcaccgc agaggcgcgg agtcgcagag ggccgcggag
     2221 gcacctcccc acgaggaaca ggtaggaaca cccggatgcc gcttgttgtc tgaccgctgg
     2281 atcgagccgg cccggcctga gagaatccct ctgcggccct ccgcgtcttt gcgcctccgc
     2341 ggtgaaaccc ggatcagaag atgacaacgc tcct
//
LOCUS       DATIFF010000609         1281 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2230790, whole genome shotgun sequence.
ACCESSION   DATIFF010000609 DATIFF010000000
VERSION     DATIFF010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1281
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2230790"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..834
                     /locus_tag="VLD58_09105"
     CDS             <1..834
                     /locus_tag="VLD58_09105"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSB54501.1"
                     /translation="IDPRTGGPVMVPLAQVANIRPSAAPDQIKRLNLERVATIEGNYE
                     GRALTDVVRDVQTRLGAIELPTGYRFNFGGEQKDFAETVGYMLESLTLAIVFIYLILA
                     SQFGSFLQPLAIMLSLPLSLVGVMLGLMLTRGTFNIMSMIGVIMLMGLVTKNAILLID
                     FANKARESGSDRRKALIDAGELRLRPIVMTTLAMIFGMLPTALALGAGAEFRAPMAHA
                     VIGGLITSTLLTLVVVPVVYTYLDDFGSWVGAKVKRWTGAPERAPVPVEPGFPEPALH
                     R"
     gene            complement(873..>1281)
                     /locus_tag="VLD58_09110"
     CDS             complement(873..>1281)
                     /locus_tag="VLD58_09110"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HSB54502.1"
                     /translation="SISPAQGFTGPGGAAEATRTLGAGTGTQTASATASELAGSPAVT
                     FTTTAATTVIRVANNVFLPATVTIQAGDSVAWQWQTGSVAHNLTFAAAPGSPANEPDR
                     SAGAVWRSFPAAGTFTYQCANHAGMTGTVAAQP"
BASE COUNT          182 a          429 c          459 g          211 t
ORIGIN      
        1 atcgacccca ggacgggagg tccggtgatg gtgcccctgg cccaggtggc gaacatccgg
       61 cccagcgcgg cgccggatca gatcaagcgg ctcaacctgg agcgggtggc caccatcgag
      121 ggcaactacg agggccgggc actgaccgac gtggttcggg acgtgcagac ccggctgggc
      181 gccatcgagc tgcccaccgg ctaccgcttc aactttggcg gcgagcagaa ggacttcgcc
      241 gagaccgtgg gctacatgct cgaatcgctc accctggcga tcgtcttcat ctatctgatc
      301 ctggcgtcgc agttcggcag tttcctgcag ccgctcgcga tcatgctgtc gctgccgttg
      361 tcgctcgtgg gcgtgatgct gggcctgatg ctcacccgcg gcacgttcaa catcatgagc
      421 atgatcgggg tgatcatgct gatggggctc gtgacgaaga acgcgatcct gctgatcgat
      481 ttcgccaaca aggcgaggga gtcggggagc gaccggcgca aggcgctgat cgatgcgggc
      541 gagctgcggc tgcgcccgat cgtgatgacg accctggcga tgatcttcgg catgctgccg
      601 acggcgctcg cgctgggggc cggggccgaa ttccgcgcgc cgatggcgca tgcggtgatc
      661 ggcgggctga tcacctcaac gctgctcacg ctggtcgtgg tgccggtggt ctacacctac
      721 ctcgacgact tcggctcctg ggtgggcgcg aaggtgaagc ggtggaccgg cgcgcccgag
      781 cgggccccgg tgccggtgga gcccggcttc cccgagccgg cgctgcatcg ctgacatcat
      841 gcgcctccgc tccctgccgg gagcgggggc tgctacggtt gcgccgccac cgtgccggtc
      901 atcccggcgt gattggcgca ctggtaggtg aacgtccccg ctgccgggaa cgaccgccac
      961 accgcaccgg cgctccgatc gggctcgttc gccggactcc ccggcgccgc ggcgaacgtg
     1021 aggttgtgcg ccacgctgcc cgtctgccac tgccaggcga ccgagtcgcc cgcctggatg
     1081 gtcacggtcg cgggcagaaa gacgttgttc gcgacccgaa tcacggtggt cgccgcggta
     1141 gtggtgaagg tcaccgcggg cgatcccgcc agttcggaag ccgtggcgga cgccgtctgg
     1201 gtgcccgtcc ctgcgcccag ggtgcgcgtc gcttcggcgg cgccaccggg tcccgtgaag
     1261 ccctgcgccg gggaaatcga c
//
LOCUS       DATIFF010000610         1035 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2078218, whole genome shotgun sequence.
ACCESSION   DATIFF010000610 DATIFF010000000
VERSION     DATIFF010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2078218"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            101..298
                     /locus_tag="VLD58_09115"
     CDS             101..298
                     /locus_tag="VLD58_09115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54503.1"
                     /translation="MDPVAAGLAVTVAPLFIGSVAVIHDLRRARHDVRTSILIAGGIW
                     IGIAMWTTLIAALLVSPIRLR"
     gene            343..>1035
                     /locus_tag="VLD58_09120"
     CDS             343..>1035
                     /locus_tag="VLD58_09120"
                     /inference="COORDINATES: protein motif:HMM:TIGR00654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HSB54504.1"
                     /translation="MSPSIVQVDAFTDQAFTGNPAAVCILAHAADKRWMQQVAGEMNL
                     SETAFLFRQGDAWNLRWFTPTVEVDLCGHATLASAHVLWQDRHLEPGTQARFDTKSGR
                     LTADRRGDWIEMDFPAEPARPAEPPDFLLQALGVKAAYVGKNRMDYLVEVASETELRT
                     MRPDFTRLRTLPVRGVIVTAPAVEDEFDFVSRFFAPGSGVDEDPVTGSAHCCLAPYWG
                     AKLGKTEMTGFQA"
BASE COUNT          154 a          373 c          345 g          163 t
ORIGIN      
        1 actggtcggc ctcccgcgca ctcatactgg tgcgcgagcg gagggcggcg ctcgaagcag
       61 tgctcacgcc cggtcccggt ccctgccgcc cgcgcgactg atggatcccg ttgccgccgg
      121 gctcgccgtc acggtcgccc cgctgttcat cggatcggtg gcggtgatcc acgaccttcg
      181 ccgcgcccgg cacgacgttc gaaccagcat cctcatcgcg ggaggcatct ggatcggcat
      241 cgcaatgtgg acgacgctca tcgcggccct cctcgtcagc ccgatccgcc ttcggtagat
      301 tgtggagcgc cacatcaccc gcgccccacg gctgaggagc ccatgtcccc gagcatcgtc
      361 caggtggacg ccttcaccga ccaggcattc accggcaacc ccgccgcggt gtgcatcctc
      421 gcccacgccg ccgacaaacg ctggatgcag caggtcgccg gcgagatgaa cctctcggaa
      481 acggccttcc tcttccgcca gggcgacgcc tggaacctgc gctggttcac gccgacggtg
      541 gaagtggacc tgtgcggcca tgccacgctc gcctccgctc acgtcctgtg gcaggaccgg
      601 catctggagc cgggcacgca ggcgcggttc gacacgaaaa gcggccgcct caccgcggat
      661 cgcaggggtg actggatcga gatggacttt ccggcggaac cggcgcgccc ggccgagccg
      721 ccggattttc tgctgcaggc gctgggggtc aaagccgcgt acgtcgggaa gaaccggatg
      781 gactacctgg tcgaggtcgc ctccgagacc gagctgcgca ccatgcggcc ggacttcacg
      841 cggctgcgca cgctgccggt gcgcggggtg atcgtcaccg cgcccgcggt ggaggacgag
      901 ttcgacttcg tgtcgcggtt cttcgccccc ggttccgggg tggacgagga tcccgtaacc
      961 ggctccgccc attgctgcct cgcgccctat tggggagcga agctgggcaa gaccgagatg
     1021 accggcttcc aggcc
//
LOCUS       DATIFF010000611         1660 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1155748, whole genome shotgun sequence.
ACCESSION   DATIFF010000611 DATIFF010000000
VERSION     DATIFF010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1155748"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..948)
                     /locus_tag="VLD58_09125"
     CDS             complement(<1..948)
                     /locus_tag="VLD58_09125"
                     /inference="COORDINATES: protein motif:HMM:NF018479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low temperature requirement protein A"
                     /protein_id="HSB54505.1"
                     /translation="MTTSWGVRLLRKPGQPEHVTFLELFFDLVFVFALTRVSQRLVED
                     ITSQRHIVMTEAGETLLILLTLWMVWLVTALITDLYDPEQTPIQLLVVATMFASLVMA
                     VAVPTAFGGRGPAFAGAYVAIHLGRGLFLVPALRGHPAQRRAARVLFWFSVSAVPWIV
                     GALFPEGVIRGVLWATAITLDYAAQTFRLPVPRLGRPPAAELPVVAEHLSERYRQFFI
                     VALGELVLVIGITSSSSNLGPAGAGAFAVSFVNTVLFWRIYIYRAGELLPAAIATARL
                     PGRLALWLSFAHLIMLTGIVAAAAGFELTIAHPDGTNDSA"
     gene            complement(1204..>1660)
                     /locus_tag="VLD58_09130"
     CDS             complement(1204..>1660)
                     /locus_tag="VLD58_09130"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB54506.1"
                     /translation="FEIALGELSWAMVRGAIYSAGFLVIMVAMGLTSAGWALLAFPAS
                     LLVGFAFGALGMSLSTFMRSWQDFDLMGSAQYALFLFSGTFVPPDSYPAALRVIVELT
                     PLYHSVELLRAISMGSAGWPALGHAGYLLAATLLGLTVAGQRMGKLLLK"
BASE COUNT          309 a          558 c          592 g          201 t
ORIGIN      
        1 ggcggagtcg ttggtcccgt ccggatgggc gatggtgagc tcgaacccgg ccgcggcggc
       61 gacgatgccg gtcagcatga tcaggtgagc gaaggacagc cacagggcga ggcggccagg
      121 gagacgagcg gtcgcgatcg cggcggggag cagctcccct gcccggtaga tgtagatccg
      181 ccagaacagg acggtgttga cgaacgacac cgcgaacgcc cccgccccgg cggggccgag
      241 gttgctgctg ctggacgtga tgccgatgac gagaacgagc tcgccgaggg cgacgatgaa
      301 gaactgccgg taccgctcgg acagatgctc ggccacgacc ggcagctccg ctgcgggcgg
      361 gcggccaagc cgggggaccg gcaggcggaa agtctgggcc gcgtagtcca gcgttatcgc
      421 cgtggcccac aagaccccac ggatcacgcc ctccgggaag agcgcaccca cgatccacgg
      481 cacagcggac acgctgaacc agaacagcac gcgtgcggcg cgacgctgcg ccgggtgacc
      541 gcgaagcgcg ggcaccagga acaggccgcg gccgaggtgg atcgcgacat acgctccggc
      601 gaaggcgggc cctcgcccgc cgaacgcagt ggggaccgcc accgccatga ccaggctggc
      661 gaacatggtc gcgacgacca ggagctggat cggcgtctgc tcagggtcgt acaggtcggt
      721 gatgagcgcg gtcacgagcc agaccatcca gagggtgagc agtatcagta gagtctcccc
      781 agcctcggtc atgacgatgt gacgctggga ggtgatgtcc tcgaccagcc gctgcgagac
      841 ccgggtgagc gcaaacacga acaccaggtc gaagaacagc tccaggaacg tcacgtgctc
      901 cggctgtcct ggcttgcgca gcagccggac tccccagctg gtcgtcatcg gtccgtcccg
      961 tcgcgtcgcg gtagcgacag gtgtcatctc cccggtggcc gaccggaaac cgatccttcc
     1021 cctgatcgga tcaccggccc ttcggtcgtg ccggagtgcg cgtcgccggt gcggtaccgc
     1081 cagacggacc cgggtgactg gctcggccag ccggttgctc cggtcgaccg gcgcgtggaa
     1141 cccctcgact gcgccggggg aactacggcc gcgccaggtt gacccgggcg aactggaccg
     1201 cggtcacttg agcagcagct tgcccatccg ttggccggcc acggtcaggc cgaggagggt
     1261 cgcggccagc aggtacccgg cgtggcccag ggcaggccag ccggccgagc ccatgctgat
     1321 cgccctaagc agctcgaccg agtggtagag cggggtcagc tcgacgatca cccgtagcgc
     1381 cgccgggtag ctgtccggcg gcacgaacgt gcccgagaac agaaacagcg cgtactgggc
     1441 gctgcccatc aggtcgaagt cctgccagct gcgcatgaac gtggacagcg acatgcccag
     1501 cgcaccgaag gcgaagccga ccagcaggct ggccgggaaa gcgagcagcg cccagccggc
     1561 cgaggtgagg cccatcgcga ccatgatcac cagaaagccg gccgagtaga ttgccccgcg
     1621 caccattgcc caggacagct cgccgagcgc gatctcgaac
//
LOCUS       DATIFF010000612         3353 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2231198, whole genome shotgun sequence.
ACCESSION   DATIFF010000612 DATIFF010000000
VERSION     DATIFF010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3353
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2231198"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..822)
                     /locus_tag="VLD58_09135"
     CDS             complement(<1..822)
                     /locus_tag="VLD58_09135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54507.1"
                     /translation="MRLTRTRRILEEAHERLTTAAAQGGDISPAGEWLLDNYYLLQEN
                     IGEVRDSLPRGYYRELPELAEGPLAGYPRVYEVAITLISHTEGRIDLANVSGFVSAFQ
                     QVAPLTLGELWALPAMLRLGLFENVRRMALRTVLRLDEMESADRAAAGIVEAAQAGQE
                     ELDRELDRFASNPPTLTPTFISRFLQQLRIEGGALPAVARLEHWIAEEALSAEDATAR
                     TTGRLALTQVMMANSITSLRAIAQVEWRSFVEEQSRMEAMLRTDPSGFYPRMTFAT"
     gene            complement(1122..1646)
                     /locus_tag="VLD58_09140"
     CDS             complement(1122..1646)
                     /locus_tag="VLD58_09140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54508.1"
                     /translation="MPILRTITVASCTFVAGLGLSSRAAAQSLVPAGQTVGGISCDAQ
                     EGQRIHIHQHLVILDHGKAVAIPPNVGQPAGKRCIYWLHTHTPDGFIHVEAPLDRSFT
                     LGDFFTVWGQPLSRTTAASAHLAKGESMKVWVDGKPFAGDPRAIPLTAHADIVIQVGG
                     PHGKPAPVADWGRL"
     gene            complement(1727..2152)
                     /locus_tag="VLD58_09145"
     CDS             complement(1727..2152)
                     /locus_tag="VLD58_09145"
                     /inference="COORDINATES: protein motif:HMM:NF024844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HSB54509.1"
                     /translation="MSLTVGQTAKRSARFTAEDVETYARLSGDRNPLHFDEAFTAGTR
                     FGRLLVQGGLTTGVLHALVAMDLPGPGTVFISQNWRFTGPVYIGDTVTAEATVLSVHA
                     SKPVTQLGIRIMRQDGEVVLEGEAWCYTASSRGVRQPVG"
     gene            complement(2207..>3353)
                     /locus_tag="VLD58_09150"
     CDS             complement(2207..>3353)
                     /locus_tag="VLD58_09150"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSB54510.1"
                     /translation="LLAQRGLSVLVVDPMRRGSDTLSTHALMRGAVLQLARWGLLGAV
                     RAAGTPTIRSTTFHYGGESITVPIKERDGVDGLYAPRRTVIDPILLDAAESAGAEVVL
                     GRSVVDLLRDGDGRVRGATIAGTDGRDVEVTAGLVIGADGVRSRIAGLVGAPREQVAT
                     STTASIYGYHRGLGVDASHWYFGIGASVGAIPTNEGYTCVFASLPSKLFESSLSKGLE
                     TVYRALLEQVSPEFAARVAESTASSRLRGFPGLPGFLRRSAGPGWALVGDAGYFKDPL
                     TAHGITDALRDAELLARAVLAGGDDALARYQETRDGLVRGLFEVTDRIASFEWDLEQV
                     KGLHLELSREMSAEVDFQQTLGETPMASPADREGNPAADGDASRAVA"
BASE COUNT          527 a         1165 c         1161 g          500 t
ORIGIN      
        1 ggtggcgaag gtcatccggg gatagaaacc ggagggatcg gtgcgaagca tcgcctccat
       61 ccggctctgc tcctcgacga agctccgcca ctccacctgc gcgatcgccc ggaggctggt
      121 gatgctgttg gccatcatca cctgcgtgag cgccagccgc ccggtggtcc gggcggtggc
      181 atcctccgca ctcagcgctt cctccgcgat ccagtgctcc agtcgcgcca cggcgggcag
      241 cgctccgccc tcgatccgga gctgctggag gaagcgggag atgaaggtcg gagtgagggt
      301 cggagggttg gaggcgaagc ggtcgagctc gcggtcgagc tcctcctggc ccgcctgcgc
      361 cgcctcgacg atcccggccg cggcccggtc ggccgattcc atctcgtcca gccgcagcac
      421 ggtgcggagc gccatccggc gcacgttctc gaacaggccg aggcggagca tggccggcag
      481 cgcccagagc tcacccaggg tgagcggcgc cacctgctgg aaggcgctca caaagccgct
      541 cacgttggcg aggtctatcc gcccctcggt gtgcgagatc agcgtgatgg cgacctcgta
      601 cacccgcgga tagcccgcga gcggcccctc ggccagctcc ggaagttccc ggtagtagcc
      661 ccgcggcagg ctgtcccgta cctcgccgat gttttcctgg aggagatagt agttgtcgag
      721 gagccactca ccggcggggc tgatgtcgcc accctgggcc gcggcggtag tcagccgctc
      781 gtgggcctcc tcgaggatcc ggcgcgtccg ggtgaggcgc acgaggagtg gcgtccgccg
      841 tcgcccacgc cggcgggaga ccaggcgctg tgcgccggcc acgacctggg cgcgttcccc
      901 gaggtgctcg gcaccgagca gctctccgcg gatcggcccc gcccgcaggt cttcacgggt
      961 gtccgcccgc agactcctga gtcggtcaag gaagcggcga gactcgagta cggcgataag
     1021 atgtctccag tggcaggcgc agcagcgggt tggcccggga ccacgcgatc aggcccggga
     1081 cgctacgctc gcagtatagg ggggagaggc cgggaaaggc gctagagcct gccccaatct
     1141 gcgaccggcg ccggtttgcc gtggggcccg ccgacctgga tcacgatgtc cgcatgcgcg
     1201 gtgagcggaa tggcccgcgg gtcgcccgcg aacggcttgc cgtcgaccca caccttcatc
     1261 gactcgccct tggcgaggtg cgccgacgcc gcggtggtcc ggctcagcgg ctgcccccac
     1321 accgtgaaga agtcgcccag agtgaacgac cggtccagcg gcgcctcgac gtggatgaaa
     1381 ccatcggggg tgtgggtgtg cagccagtag atgcagcgct tcccggcggg ctggccgacg
     1441 ttgggcggga tggcgaccgc cttgccgtgg tcgaggatca ccagatgctg gtgaatgtga
     1501 atccgctgac cctcctgcgc atcacaggag attccgccga cggtctggcc cgccggcacg
     1561 agagactgcg cggccgcccg cgaggacagg cccaatccgg cgacaaaggt gcacgaggca
     1621 acggtgatgg tacgtagtat tggcatggct gaaagatgcc cggccccctg cgagggtggc
     1681 aactcggccc gtcccggtca ggatgaggcc aaggcccggg aaggcttcat cccaccggct
     1741 gccgaacacc acgggaactc gccgtgtagc accacgcctc cccctccagt accacctcgc
     1801 cgtcctggcg catgatgcgg atgcctaact gggtgaccgg cttgctggca tggacggaga
     1861 ggacggtggc ctcggcggtg accgtgtcgc cgatgtacac cgggcccgta aagcgccagt
     1921 tctggctgat gaagaccgtg ccgggtccag gcaggtccat cgctaccagc gcgtgcagga
     1981 caccggtggt gagcccgccc tggaccagca gccgcccgaa ccgggttccg gcggtaaaag
     2041 cctcatcgaa gtgcaatggg ttgcgatctc ccgagagacg ggcgtacgtc tcgacatcct
     2101 cagccgtgaa gcgggcggag cgtttcgcgg tctggccgac ggtaagcgac atgggggctc
     2161 ctcgagtcgt tttcagtttt tgatcgatca cctgtctgct cgcggatcac gcgacggcgc
     2221 gactcgcgtc cccgtctgct gccgggtttc cttctctgtc tgccggtgat gccatcggcg
     2281 tttcacccag ggtctgctgg aagtccacct cggcgctcat ctcccggctc agctcgagat
     2341 gcaatccctt gacctgctcc aggtcccatt cgaacgaggc gatccggtcg gtgacctcga
     2401 agaggccccg caccagccca tcgcgggtct cctggtagcg cgccaaggca tcgtcgccgc
     2461 cggcgagcac tgcccgcgcc agcagctcgg cgtcgcgcag ggcatcggtg atgccatgag
     2521 cagtcagtgg gtccttgaag tagccggcgt ctcccaccag ggcccacccc ggtcccgccg
     2581 agcgtcgcag aaaacccggc aggccgggga agccccgtag ccggctcgac gctgtggact
     2641 cggccacccg ggccgcgaac tcgggcgaca cctgctccag cagcgcgcgg tacactgtct
     2701 ccaggccctt cgacaggctc gactcgaaca gcttcgacgg cagggaggcg aagacacagg
     2761 tgtagccctc gttcgtcggg attgccccga ccgaggcacc gattccgaag taccagtgcg
     2821 atgcgtcgac acccaggccg cggtggtagc catagatcga cgcggtagtg gaggtcgcca
     2881 cctgctccct gggggccccg accaggcccg cgattcgtga acggacgcca tcggcgccga
     2941 tgaccaggcc ggcggtcacc tcgacgtcgc ggccatcggt gccggcgata gtggcgccgc
     3001 ggacccgccc gtccccgtcc cgcagcaggt ccaccaccga gcgacccagc acgacctcgg
     3061 cccccgccga ctcggctgcg tcgagcagga tcggatcgat gacggtgcgg cgtggggcgt
     3121 acagcccgtc cacgccatcc cgctccttga tcgggacggt gatcgactcg ccgccgtagt
     3181 gaaacgtggt gctccggatc gtcggggtcc cggccgcgcg cacggcgccg agcaggcccc
     3241 agcgggcgag ctgcagcacg gcgccccgca tgagggcgtg ggtggaaagc gtgtcgctgc
     3301 cgcgccgcat cggatccaca accagcacgg agaggccgcg ctgcgccagc agc
//
LOCUS       DATIFF010000613         2547 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_233154, whole genome shotgun sequence.
ACCESSION   DATIFF010000613 DATIFF010000000
VERSION     DATIFF010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2547
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_233154"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(30..830)
                     /gene="truA"
                     /locus_tag="VLD58_09155"
     CDS             complement(30..830)
                     /gene="truA"
                     /locus_tag="VLD58_09155"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HSB54511.1"
                     /translation="MSRTYLALLHYDGSDFTGWQRQADGRTVQAELEAVLERLCGHRV
                     VAHGAGRTDAGVHALGLGVSFSVPDKWEAGSLRRALNALLPKDCWVASLTPMVAGFHA
                     RKSASGRQYRYDVGTDDGAHSPFRRRTEWALGRPLDLALLERAARQIAGRHRFEAFAV
                     RKPLEHYDCTVRLAQWQVRPQDQGYSFHVAADRFLHHMVRFLVGTMVDIGLGRRPLED
                     MAVLLTATDNQATSPPAPPQGLYFVRAEYGAEWFAGAPDEVATSGAAR"
     gene            963..>2547
                     /locus_tag="VLD58_09160"
     CDS             963..>2547
                     /locus_tag="VLD58_09160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54512.1"
                     /translation="MKIPPRGFALLAASSLLSAGALAAQTPRALVEITNLTPNEHRVA
                     GFVLARPQFLEIQATGVAPRGNNEGGWWGRDEEQDSWPAAAWIIETTTRAVVWDLRRV
                     KTNRVAHVRRFTGPIRLPAGTYEAHFASYLGGSNLEREGAFRDFGFRITGVGRPARPR
                     ELKEPVQQFFETAFVRLAPDTSGVTRAGFELPRATEVEVVALGELRQRRGFDYGWIQN
                     ADTRQVLWRMEYGNTVDAGGAHKNRMARDTLELAAGRYVATFVSDSQHNPKGWDAVPA
                     YDPALWGLTLRVSDEATRRSIRKFTWQPVPEGQTIVSLLKIKDDELRSQGFALPKALD
                     VRIYAMGECTSLDQSEFSDGAWLMDLTHQLRAWEMRCNLTQPAGGAAKNRLVDTLLHL
                     EPGNYTLFYKSDGSHSTEEWNAAPPSEPRYWGVSLFPASGQLTPGMVGPPVRDTTGII
                     AELTRVRNSRKSRRFFSLEAPTQVRIYALGEATGGEMHDFGWIENGKTGTKVWTMEYP
                     ATRAAGGAEKNRLVDSTMTL"
BASE COUNT          427 a          886 c          857 g          377 t
ORIGIN      
        1 cagggtgagg acggcaaagc gcacgatctt catcgggcgg ctccgctggt cgcgacttca
       61 tcgggcgcgc cggcgaacca ctcggccccg tactccgccc tgacgaaata gagcccctgg
      121 ggcggcgccg gcgggctcgt cgcctgattg tcggttgcgg tgagcagaac ggccatgtcc
      181 tcgagggggc gacggcccaa gccgatgtct accatcgtgc ctaccaggaa gcggaccatg
      241 tggtgcagga accggtcggc cgcgacatgg aacgagtagc cctgatcctg cggccgcacc
      301 tgccactggg ccagccgcac cgtgcagtcg taatgctcca gcggcttgcg caccgcaaag
      361 gcctcaaagc gatgccggcc cgctatctgc cgggccgcgc gctccagtaa cgccaggtcc
      421 agcgggcgcc ccagcgccca ctcggtccgc cgtcggaacg gcgaatgggc gccgtcgtcg
      481 gtccccacgt cgtaacggta ctgcctgccg ctggcgctct ttctcgcatg gaagcccgcc
      541 accatggggg taagcgaggc cacccagcag tccttgggca agagcgcgtt cagtgcccgc
      601 cggagcgaac ccgcctccca cttgtcgggg accgagaagc tcacccccag tccgagggca
      661 tgaactccgg cgtcggtccg gccggcccca tgggcaacga cgcgatggcc gcagagccgc
      721 tcgagcaccg cttccagttc ggcctgtacc gtgcgcccgt ccgcctggcg ctgccagccg
      781 gtgaaatcgc tgccatcgta atgcaggagg gccagatagg tccggctcat gaggccggaa
      841 atatagtcgg atgggggccc ggacggcgga cccgattttc ctcgccggac tgcggttcgg
      901 caccccgaaa cgtttcggac ctgaacgtcg tccggggcta acacttatat atggcttctc
      961 atatgaagat cccgcctcgt gggttcgccc tgctcgccgc ctcgagcctc ctttccgccg
     1021 gcgcactcgc cgcgcagacc cctcgcgccc tggtggaaat caccaacctc acccccaatg
     1081 agcaccgggt ggccgggttt gtcctggccc gtccccagtt cctcgagatc caagccaccg
     1141 gggtagcgcc gaggggcaac aacgagggcg ggtggtgggg cagggatgag gagcaggatt
     1201 cctggccggc cgccgcctgg atcatcgaga ccaccacccg cgccgtcgtg tgggacctgc
     1261 ggcgggtgaa gaccaatcgg gtcgcgcacg tgcgccgctt caccggaccc atccggcttc
     1321 cggcagggac ctacgaggcc cacttcgcgt cctacctggg cggctcgaat ctcgagcggg
     1381 agggggcctt ccgggacttc ggtttccgga tcaccggcgt cggccggccg gcgcggcccc
     1441 gtgagctcaa ggagccggtt cagcagttct tcgaaaccgc cttcgtgcga ctcgccccgg
     1501 atacgagtgg cgtcacccgt gcggggttcg aactgcctcg ggccaccgag gtcgaggtgg
     1561 tggcgctggg agagttgcgg caacgccggg gcttcgacta cggctggatc cagaacgccg
     1621 acacccgcca ggtgctctgg cggatggagt acggcaacac ggtcgacgcc ggcggggccc
     1681 acaagaaccg catggcgcgc gacaccctcg agctggcagc ggggaggtac gtcgcgacct
     1741 tcgtgagcga cagccagcac aacccgaagg gatgggatgc ggtgccggcc tacgacccgg
     1801 cgctctgggg cctgacgctc cgggtgagcg acgaggccac ccgccgttcg atccggaagt
     1861 tcacctggca gccggtgccg gaaggccaga ccatcgtctc gctcctcaag atcaaggacg
     1921 acgagctccg ctcgcagggc ttcgcgctgc ccaaggcgct cgatgtccgc atctatgcga
     1981 tgggtgagtg caccagcctc gaccagagcg agttcagcga cggcgcctgg ctcatggatc
     2041 taacccacca gctgcgtgcc tgggagatgc gctgcaatct cacccagccc gcgggcgggg
     2101 cggccaagaa tcggctggtc gacaccctgc ttcacctgga gccggggaac tacaccctgt
     2161 tctacaagag cgatggctcg cactccaccg aggagtggaa cgcggcgccg cccagcgagc
     2221 cccgctactg gggcgtgagt ctctttccgg cgagcgggca gctcacgccc gggatggtcg
     2281 gaccgccggt gcgcgacacc accggcatca tcgccgagct gacccgggtg cggaacagcc
     2341 gcaagtcccg ccgctttttc agtctcgagg ccccgaccca ggtgcggatc tacgccctgg
     2401 gcgaagcgac cggcggcgag atgcatgatt tcggctggat cgagaacggc aagaccggga
     2461 cgaaggtatg gaccatggag taccccgcca cccgcgcggc cggcggggcc gaaaagaacc
     2521 ggctggtcga cagcaccatg acccttc
//
LOCUS       DATIFF010000614         1400 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2078821, whole genome shotgun sequence.
ACCESSION   DATIFF010000614 DATIFF010000000
VERSION     DATIFF010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1400
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2078821"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..498
                     /locus_tag="VLD58_09165"
     CDS             <1..498
                     /locus_tag="VLD58_09165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54513.1"
                     /translation="RSWGPYQRACPASRCHDRMHPLGLGPTRPEPGLAPSGKDADLPR
                     MPALTISDLLNALQAAIQGLESRSGTDIVSAQELEKVKLRLDDIRLSLWAHLQRLHTD
                     DLTRFEQRFRVRRAGELCVRLRADLDAHLLDADQPEFADLWIITNQLSQAIQTSRQRG
                     DPGPR"
     gene            complement(510..>1400)
                     /locus_tag="VLD58_09170"
     CDS             complement(510..>1400)
                     /locus_tag="VLD58_09170"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HSB54514.1"
                     /translation="FADRDFYYGDPSATPAPPIKGLLSKEYAKSRFAKIDWSHNDPGV
                     RPGDPYPFQGGVNPFKELLDRWTVTSAPAGTPVSGQQDRPGIPAPESKESFEAFKAEF
                     NSGTTSIEAADEEGWVVSVTPSGGWIPAVIAGRTGVGLSQRMQSFVTDPADGPYNVVA
                     PGKRPRVTLTPTLALRDGSPWLAFAVQGGDSQDQNLLQFFLNVAEFGMTPQEAAEAPN
                     MNSYQMRSSFGAHEARPGRMLLADAVPAWIRAELRGMGYTLEFEERTSGPINAILFDR
                     KHGSMWGGSSHHGEDYGIAW"
BASE COUNT          212 a          517 c          454 g          217 t
ORIGIN      
        1 cggtcctggg ggccgtacca gcgggcctgc cctgcctccc gttgccacga ccggatgcac
       61 ccgctagggt tggggccgac ccggccggag ccgggtctgg caccatccgg aaaggacgcc
      121 gacctccccc gcatgcccgc gctcaccatt tccgatctgc tgaatgccct tcaggccgcg
      181 atccagggac tcgaatcgcg ctcgggcacc gacatcgtct cggcccagga gctggagaag
      241 gtcaagctcc gcctcgacga catccgcctg agcctctggg cccacctgca gcgcctgcac
      301 accgacgacc tgacgcgatt cgagcagcgc tttcgggtcc ggcgcgccgg cgagctctgc
      361 gtccggctcc gggccgacct cgacgcccac ctgctcgacg ccgatcagcc cgagttcgcc
      421 gatctctgga tcatcaccaa tcagctgagc caggccatcc agacatcccg gcagcgggga
      481 gaccccgggc cccgctgacg ggcccaccgt caccaggcga tcccgtagtc ctcgccgtgg
      541 tgactcgacc cgccccacat gctgccgtgc ttccggtcga acaggatggc gttgatcggc
      601 ccggacgtac gctcctcgaa ctcgagcgtg tagcccatcc cgcgcagctc ggcgcggatc
      661 caggcgggca ccgcatcggc cagcagcatc cggccgggcc gcgcctcatg ggcgccgaac
      721 gacgagcgca tctggtacga gttcatgttg ggagcctcgg ccgcctcctg cggcgtcatg
      781 ccgaactcgg cgacgttcag gaagaactgc aggaggttct gatcctggct gtcgcccccc
      841 tgcaccgcga aggcgagcca gggtgatccg tcgcggagcg cgagggtcgg agtcagggtg
      901 acccggggcc gcttcccggg agccacgacg ttgtacggcc catcggcggg atcggtcacg
      961 aagctctgca tccgctggct caacccgacc ccggtgcgcc cggcgatgac cgccggaatc
     1021 catcccccgc tcggcgtcac cgagacgacc catccctcct catcggcggc ttcgatcgac
     1081 gtggttccgc tgttgaactc cgctttgaag gcctcgaacg attccttcga ctccggcgcc
     1141 ggaatgccgg gccggtcctg ctgcccgctc accggcgtcc cggccggagc gctggtcacg
     1201 gtccagcgat cgaggagctc cttgaaggga ttgaccccgc cctggaaggg gtagggatca
     1261 cccgggcgca cgcccggatc gttgtggctc cagtcgatct tcgcgaaccg ggacttcgcg
     1321 tactccttcg agagcagccc cttgatcggg ggcgccggcg tggcggaggg atcaccgtag
     1381 tagaagtcgc ggtcggcgaa
//
LOCUS       DATIFF010000615         2200 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_846524, whole genome shotgun sequence.
ACCESSION   DATIFF010000615 DATIFF010000000
VERSION     DATIFF010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2200
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_846524"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            40..438
                     /locus_tag="VLD58_09175"
     CDS             40..438
                     /locus_tag="VLD58_09175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54515.1"
                     /translation="MNRFTSKLLLAALLIAGTACSNDPTSSTPRQGTLRLRLTTPNAD
                     DGAMLFTVHGRAIDTALAGNTNLRLFTRRVNDSTLVGALVGTLAGGVVVTLDIGDASA
                     TGYTASVAEVADRNSTLRASLDGYGLTIAP"
     gene            485..1324
                     /locus_tag="VLD58_09180"
     CDS             485..1324
                     /locus_tag="VLD58_09180"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSB54516.1"
                     /translation="MAREDSLGASAKVDLASAPPCPCPRAPVFAASSTIAGRAGASIS
                     GTTSAGFGPTATLSASPSCWPSSPPGSSWSNRCSCGSSSIGSCSSLSWTVRAGWHSST
                     WPGSPSSPSCSSRTSSAPSRTTARGSSTRRGGRANAHEFIERLPEVYDTLIGERGVKL
                     SGGQCQRLAIARAILAEPRILILDEATSNLDTESEQLIQESLADLLGSQTTFVIAHRL
                     STIRRVHLILLMEDGRIIERRSHQELMEARGVYHQMVLRQLEAAGEGDAGGWLDAVGG
                     RDE"
     gene            complement(1255..>2200)
                     /locus_tag="VLD58_09185"
     CDS             complement(1255..>2200)
                     /locus_tag="VLD58_09185"
                     /inference="COORDINATES: protein motif:HMM:NF012892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HSB54517.1"
                     /translation="AGRVRVYARVTPEQKIAIIEALQARGECVAMTGDGINDAPALRR
                     ADVGIAMGHGGTDVAREAAPLVLLDDNFATIVSAVRAGRRIYDNLRKFVRYAVTCNAA
                     EMATLLLAPLLGLPLPLLPIHLLWINLVTDGLPGIALAAEPAEPGLMRRPPRPLDENI
                     FAGGLWQHVVWVGFLMAGVTLATQAWSHHTGLAHWQTMTFTVLALSQMGHVLAIRSER
                     ESLFRLGLWGNPALLVAVCLTVLLQLGVIYLPWAAAIFKTAPLSGGELVACLLASAVV
                     FVAVEGEKTLIRRGRLYSSRPPTASSHPPASPSPAASS"
BASE COUNT          354 a          780 c          727 g          339 t
ORIGIN      
        1 ggccgagctg cggatccggc aacacactgg gagcaaccga tgaaccgctt tacctcgaaa
       61 ctgctgctgg cggccctgct gattgcgggc acggcctgct cgaacgatcc caccagcagc
      121 acacctcggc agggaaccct gcggctccgg ctgaccacgc cgaacgccga cgatggcgcg
      181 atgctgttca ccgtgcacgg tcgggcgatc gacaccgccc tcgcgggcaa cacgaatctc
      241 cggctgttca ctcgacgggt gaacgactcg accctggtgg gggcgctggt cggcacgctc
      301 gccggaggcg tggtcgtcac cctggatatc ggcgatgcca gtgcaaccgg atacaccgcg
      361 agcgtggccg aggtggcgga ccggaacagc accttgcgcg cctcgctgga cggctacggg
      421 ctgaccatcg ctccctgatc gaggtcggca ggggttggcg ccttccgagc ccccttcgta
      481 aggggtggca cgagaggata gtttgggagc ttccgcgaag gtcgatctcg cttcggcgcc
      541 tccatgcccc tgccctcgcg cgcccgtttt cgccgcttcg tcgacgattg ccgggcgcgc
      601 cggcgcgagt atctcgggga ctacttccgc tggcttcggc cccaccgcta cgctctcggc
      661 ttcgccttcc tgctggccct cctcacctcc gggctccagc tggtcgaacc gctgttcatg
      721 cggttcatca tcgatcgggt cctgctcaag cctgagctgg acggtccgag ccggctggca
      781 ctcctcaacc tggccgggct caccttcgtc gccgtcctgt tcctctcgaa cttcgtcggc
      841 gccctcaagg actaccgcca gaggctcctc aacgcggcgc ggcgggcggg ccaacgccca
      901 cgaattcatc gagcgcctcc ccgaggtcta cgacaccctg atcggcgagc ggggagtgaa
      961 gctctcgggc gggcaatgcc agcgcctggc catcgcgcgc gccatcctcg cggagcctcg
     1021 catccttatc ctggacgagg cgaccagcaa tctcgacacc gagagcgagc agctgatcca
     1081 ggagtcgctg gctgacctgc tgggcagcca gaccaccttc gtaatcgcgc accggctgtc
     1141 gaccatccgc cgggtccacc tgatcctgct gatggaggat ggacgcatca tcgagcggcg
     1201 cagccaccag gagttgatgg aagcccgcgg agtctaccat cagatggtgc tgcgtcagct
     1261 ggaggcggcc ggggagggcg acgcgggagg atggctcgac gcggtggggg gacgcgacga
     1321 gtagagccgg ccccgccgga tcagcgtctt ctctccttcc accgcgacga acacgaccgc
     1381 cgaggcgagg aggcatgcca ccagctcccc gcccgagagg ggcgcggtct tgaagatcgc
     1441 cgccgcccac ggcaggtaaa tgacacccag ctggagcagc accgtgaggc acaccgctac
     1501 cagcagggcc gggttgcccc acaaccccag gcggaagagt gattcccgct cggaccggat
     1561 ggccagcaca tgccccatct gcgatagcgc cagcacggtg aacgtcatgg tctgccaatg
     1621 ggccaggccg gtgtgatggc tccatgcctg ggtcgcgagc gtcacaccgg ccatgagaaa
     1681 gccgacccac accacgtgct gccagagccc gcccgcgaag atgttctcgt ccagcggcct
     1741 gggcggccgg cgcatcaggc ccggctccgc cggctcggcc gcgagcgcga ttcccggcag
     1801 cccatcggtc accaggttga tccagaggag gtgaatcggg agcagcggga gcggcagtcc
     1861 caggagcggc gccagcagga gggtcgccat ttcggcggcg ttgcaggtca ccgcgtagcg
     1921 gacaaacttg cggaggttgt cgtagatccg gcgccccgct cgcaccgcgc tcacgatggt
     1981 agcgaagttg tcgtcgagca gcaccagcgg tgcggcctca cgggccacgt ccgtcccgcc
     2041 gtgccccatg gcaatcccca cgtcggcacg gcgcagcgcc ggggcatcgt tgatcccgtc
     2101 accggtcatg gcgacgcatt cgccgcgcgc ctgcagcgct tcgatgatcg cgatcttctg
     2161 ctccggtgtg acccgggcgt agacccggac ccggcccgcc
//
LOCUS       DATIFF010000616         2051 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1001917, whole genome shotgun sequence.
ACCESSION   DATIFF010000616 DATIFF010000000
VERSION     DATIFF010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2051
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1001917"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..514)
                     /locus_tag="VLD58_09190"
     CDS             complement(<1..514)
                     /locus_tag="VLD58_09190"
                     /inference="COORDINATES: protein motif:HMM:NF014670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HSB54518.1"
                     /translation="MNPPSLLAQATWDEVRATRYEVAVLPWGATEAHNRHLPYATDTI
                     QCDAIAARSARIAWDHGARVLVLPTVPFGVQTGQLDVPFCLNLNPTTQTIVLRDLIRT
                     IEPHGVGKLVILNGHGGNDFRQIIRELAPETGMLLCQVNWYTALDPAGYFDEPGDHAG
                     EMETSLVLHLA"
     gene            646..906
                     /locus_tag="VLD58_09195"
     CDS             646..906
                     /locus_tag="VLD58_09195"
                     /inference="COORDINATES: protein motif:HMM:NF025614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPXCG motif-containing cysteine-rich protein"
                     /protein_id="HSB54519.1"
                     /translation="MADETFDPDQDEELDEFDDGDSSLEAEAEVACPYCGETSVIDLD
                     PDGGPVQEYVEDCQVCCRPWRVFLSYAADGSADVSVVPEDEE"
     gene            complement(911..1639)
                     /locus_tag="VLD58_09200"
     CDS             complement(911..1639)
                     /locus_tag="VLD58_09200"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HSB54520.1"
                     /translation="MADRGLNRRDFLRLGLVAGPTTLVAACGWSGGPLLEAKLMSFSR
                     VNDWVGEKLLHSNSRLAPEYAAAARTADREFPAYSITYNRVRRFPAVPADWSLEVGGL
                     VRKPLRLTLPMLQAMPSVSYTVKHHCVEGWTAVASWTGVPVSAVVAMAEPLPAARYLR
                     FDSFDSKYSNGWDLTSAMHPQTILAYARNDRLLGPDRGAPLRLYSPVKLGYKLTKYLT
                     AMTFTAERHGGYWEDQGYPWLGGV"
     gene            complement(1632..>2051)
                     /locus_tag="VLD58_09205"
     CDS             complement(1632..>2051)
                     /locus_tag="VLD58_09205"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HSB54521.1"
                     /translation="LSGLLYLGFLAASGEWRSLLFRPRDVGPAVQMQLYYLRLRPDHP
                     PQGKHNALQKGAYTAIVALGALSALTGFAIYKPVQLGWLTTFFGGYELARYWHFVAVW
                     VFVAFTLLHVMLVLLVDPASLRAMITGWYRGRFPSHG"
BASE COUNT          331 a          677 c          746 g          297 t
ORIGIN      
        1 gggcaaggtg gaggaccaga ctcgtctcca tctcgccggc gtggtcgccg ggctcgtcga
       61 aatacccggc cggatcgagc gcggtgtacc agttcacctg gcacagcagc atcccggtct
      121 cgggcgccag ctcccggatg atctggcgga agtcgttccc gccgtggccg ttcaggatca
      181 ccagcttccc gacgccgtga ggctcgatcg ttcggatcag atcccgcagc acgatcgtct
      241 gggtggtcgg attcaggttg aggcagaagg gtacgtcgag ctggccggtc tggaccccga
      301 acgggacggt cggaagcacc aggacccggg cgccgtgatc ccaggctatc cgcgccgagc
      361 gggccgcgat cgcgtcgcac tggatcgtgt ccgtcgcgta gggcagatgc cggttgtgcg
      421 cctcggtggc gccccacggt aacaccgcga cctcgtaccg ggtcgcgcgg acttcgtccc
      481 aggtcgcctg ggccaggaga gatggtgggt tcaccgcggc gcgcgggact gagggatcgt
      541 cgctcaccgg ccgtaggatc ggcccctgcc cgcgcggcgt caagcggcgg ccgatcggcc
      601 cccggggcaa tggagcaccc cgccccgaca tggtaggttc ggtccatggc tgacgagacg
      661 ttcgacccgg atcaggacga ggagctcgac gagttcgacg acggggactc gagcctcgag
      721 gccgaagccg aggttgcctg tccctattgc ggcgagacct cggtgatcga cctcgatccc
      781 gacggcgggc cggtccagga gtacgtcgag gattgccagg tctgctgccg gccgtggcgg
      841 gtgttcctgt cctacgcggc cgacggaagc gccgacgtgt cggtggtgcc ggaggacgag
      901 gagtagaccc tcagaccccg ccgagccagg ggtagccctg gtcctcccaa tagccgccgt
      961 ggcgctcggc ggtgaaggtc atcgccgtga gatacttggt gagcttgtag cccagcttga
     1021 ccggcgagta cagccggagc ggcgcgcccc ggtcaggccc gagcaggcga tcgttccggg
     1081 cataagccag gatcgtctgc gggtgcatcg cgctggtgag gtcccacccg ttggagtatt
     1141 tgctgtcgaa cgagtcgaac cggagatagc gcgcggccgg gagcggctcc gccatcgcga
     1201 ccacggcgga caccggcacc ccggtccagc tcgccaccgc ggtccatccc tccacgcagt
     1261 ggtgcttgac cgtatagctc acgctgggca tggcctggag catcgggagg gtgagccgga
     1321 gcggcttccg gaccaggccg cccacctcca ggctccagtc ggccggcacg gcgggaaacc
     1381 gccggacccg gttgtaggtg atggagtagg cggggaactc ccggtcggcg gtgcgcgcgg
     1441 cggcggcgta ctcgggcgcc aggcgcgagt tggagtggag cagcttctct ccgacccagt
     1501 cgttgacccg gctgaagctc atgagcttcg cctccagcag cgggccaccg ctccagccgc
     1561 acgccgccac cagagtggtg ggtccggcca ccagccccag ccgcaggaag tcgcggcggt
     1621 tcaatccccg gtcagccatg gctgggaaac ctcccccggt accagccggt gatcatcgcc
     1681 cggagcgacg ccgggtccac cagcagcacc agcatcacgt gcagcagggt gaaggcgacg
     1741 aagacccaga ccgccacgaa gtgccagtac cgggccagct cgtagccgcc gaagaaggtg
     1801 gtgagccagc cgagctgcac cggcttgtag atggcgaacc cggtgagggc cgagagggcg
     1861 ccgagagcga cgatggcggt gtaggcgccc ttctggagcg cgttgtgctt cccttgcggg
     1921 gggtgatcgg gccggagtcg caggtagtag agctgcatct gcaccgcggg cccgacgtca
     1981 cgggggcgga agagcagcga tcgccactcg cccgaagcgg cgaggaagcc caggtacagc
     2041 agcccgctca g
//
LOCUS       DATIFF010000617         1039 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_79049, whole genome shotgun sequence.
ACCESSION   DATIFF010000617 DATIFF010000000
VERSION     DATIFF010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79049"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..847)
                     /locus_tag="VLD58_09210"
     CDS             complement(<1..847)
                     /locus_tag="VLD58_09210"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS701 family transposase"
                     /protein_id="HSB54522.1"
                     /translation="MSLLDHPAAQALLDDTAVTPDSVRDCTDRLTGFLQRYLPRFYRV
                     EQRENATLVIRGLLSGLERETSEPIAIEAGLPRKPIQFFVGSGKWDDEAVMRELRTHV
                     REELAEPNGVVVIDPGGFPKKGTESCGVARRWCGRLGKVENCQVGVFLAYAATAGYAP
                     LDRRLYLPEDWAGDPARREKCHVPPVVEFQEKWQIALDLLDRSLPGLPHGWIAGDDEF
                     GRASEFRAELRLRHERYVLDVPCNTTVRDLQRRRPPRKRAGVGRRRAVPFVRANAWAA
                     NQPESR"
BASE COUNT          162 a          363 c          358 g          156 t
ORIGIN      
        1 accgcgactc cggctggttc gccgcccagg cgttggcccg cacgaacggc accgcgcgcc
       61 tacggcccac tccggcccgc ttgcggggcg ggcgacgccg ctggaggtcg cggaccgtgg
      121 tgttgcacgg cacgtccagg acgtaccgct cgtgccgcag gcggagctcg gcgcggaact
      181 cggaggcccg gccgaactcg tcgtcacctg cgatccagcc gtggggcagc cccggcaggc
      241 ttcggtccaa gagatcgagg gcgatctgcc acttctcctg gaactcgacc acgggtggga
      301 cgtggcactt ctcacgccgg gctggatcgc cggcccagtc ctcgggcagg tagagccggc
      361 ggtccaaggg ggcgtacccg gccgtcgcgg cgtaagcgag gaagacgccg acctggcagt
      421 tctcgacctt gcccagccgg ccgcaccacc ggcgggcgac accgcaggac tcggtcccct
      481 tcttggggaa gccgccggga tcgatgacca cgacgccgtt cggctcggcc aactcctcgc
      541 ggacatgggt ccgcagttcg cgcatcacgg cctcgtcgtc ccacttgccg gagccgacga
      601 agaactggat cggcttgcgt gggagcccgg cctcgatggc gatcggctcg cttgtctcgc
      661 gctccaaccc gctgagcagc ccgcggatga ccagggtggc attctcgcgt tgctcgacgc
      721 ggtagaaccg tggcaggtac cgctgcagga agccggtcag gcggtcggtg caatcgcgga
      781 cggaatcggg cgtgaccgcg gtgtcgtcca ggagggcctg tgccgcgggg tgatccagga
      841 gcgacatcgg gatacctcca gtatggggga cgtatcctcc tcacgatcca ggatatgcga
      901 acaggccgcg gcggtcacgg agaatcggtt acagtagaag tagcggtcct gccgcttatc
      961 cttggggctc gggcattttc accgacgacc gcaccccgag cccaaccccc atgccatccg
     1021 ccacgatcat ccgccgcac
//
LOCUS       DATIFF010000618         2601 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1925034, whole genome shotgun sequence.
ACCESSION   DATIFF010000618 DATIFF010000000
VERSION     DATIFF010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2601
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1925034"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1337
                     /locus_tag="VLD58_09215"
     CDS             <1..1337
                     /locus_tag="VLD58_09215"
                     /inference="COORDINATES: protein motif:HMM:NF017964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HSB54523.1"
                     /translation="GAYRHAPDWYRNFLYEVERERGLDHVEDLWSPGELRFDLAQGEA
                     VLAFSTSEGARAGDAYVVRRGSGKTIIAGYPWFTDWGRDTFIALRGLCLATGRLDDAR
                     AILLEWAGLVSQGMLPNRFLEQGDEPEFNSVDASLWYIIGVHEFLQAQGAAGKRIPPA
                     ERKSLERAVTAILEGYSRGTRYGIRMDDSGLLDAGVPGVQLTWMDAKVGDWVVTPRIG
                     KPVEIQALWINALMIGGQFDERWIRIAGRATATFRARFWNEAGFLYDVIDNNGEPGAL
                     DPSFRPNQLFAIGGLPWAVLDEERARAVVDQCESRLWTLMGPRSLAPGESAYTPRYEG
                     GPVQRDGSYHQGTVWPWLAGPFIEAWVRCRGNTPAAKAEARRRFFDPLLTQLERAGLG
                     HLAEIADGDPPHTPRGCPFQAWSMGELLRLDRVVLAAPVSAAGPRRVMEGAR"
     gene            1334..>2601
                     /locus_tag="VLD58_09220"
     CDS             1334..>2601
                     /locus_tag="VLD58_09220"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSB54524.1"
                     /translation="MIPATPVRVVILGGGFGGLFTAIELEKRWPREVPLDLTLVSRDN
                     HMLFTPMLHEVAASDVDITHVVNPVRKLLKRAAFFAGEVEAISLDDRSVTVCHVDGGH
                     RHELPFDHVVLALGSVTNFFGLPGLAERALTMKSLGDAITIRNRAIQLLEEADFECKA
                     SERHDLLTFVIAGGGFAGVETAAALNDFLRDALEFYPHLGREHLRVILVHPGNVLLPE
                     LDPRLGEYAGKELRRQGIEVHLNAKVTGMSADGVCLGDGTLISSRNLIWTAGTAANPA
                     LGMLPCDKDRGRIAVDATLAVPGFPGVWALGDCAAIPDPRTGKQQPPTAQHAIREAKV
                     AATNIIAQVTGRPLVEFRFPGLGQLAAIGRRRGVAQILGIRFSGFLAWWLWRTIYLSK
                     LPRLERKIRVALDWALDLVFSKDIVQFQTFR"
BASE COUNT          382 a          901 c          894 g          424 t
ORIGIN      
        1 acggcgccta ccggcacgcg cccgactggt accgcaactt cctctacgag gtcgagcgcg
       61 agcgcgggct cgatcacgtc gaggacctgt ggtcgccggg tgagctgcgc ttcgaccttg
      121 cgcagggcga ggccgtgctg gccttctcca ccagcgaggg cgcgcgggcc ggcgatgcgt
      181 acgtcgtgcg gcgcggaagc gggaagacca tcatcgccgg ctatccctgg ttcacggact
      241 ggggccgcga caccttcatc gcgctgcggg gcctctgcct cgccaccggg cggctcgacg
      301 atgcccgcgc aatcctgctc gaatgggccg gcctggtctc ccagggcatg ctgcccaatc
      361 gcttcctcga gcagggcgac gagcccgagt tcaactcggt ggatgcctcc ctctggtaca
      421 tcatcggcgt ccacgagttt ctccaggcgc agggcgccgc ggggaagcgg attccccctg
      481 ctgaacggaa gagtctcgag cgcgccgtca cggccattct cgagggctac agccgcggca
      541 cgcgctacgg catccggatg gatgactccg ggctcctcga tgccggcgtt cccggcgtgc
      601 agctcacctg gatggacgcg aaggtgggcg actgggtcgt caccccgcgc atcggcaagc
      661 cggtcgagat ccaggcgctc tggatcaatg ccctgatgat cggaggccag ttcgacgagc
      721 gctggatccg gatcgccggg cgggccaccg ccacgttccg ggcccggttc tggaacgagg
      781 ccggattcct ctacgatgtg atcgacaaca acggcgaacc cggcgcgctc gacccgtcgt
      841 tccgtcccaa ccagctcttc gcgatcggcg gcctgccctg ggcggtgctg gacgaagagc
      901 gggcgcgcgc cgtggtcgac cagtgcgagt cgaggctctg gactctgatg ggtccgcgca
      961 gcctggcacc gggcgaatcg gcatacaccc cgcgctatga aggcggtccg gtccagcgcg
     1021 atgggtccta tcaccagggc acggtgtggc cctggctcgc gggtcccttc atcgaggcct
     1081 gggtccgttg ccgcggcaac acccccgcgg ccaaggccga agcccgccgc cgcttcttcg
     1141 atccgctcct cacccagctg gaacgcgccg ggctcggtca tctcgccgag atcgccgatg
     1201 gggatccgcc gcacacgccg agggggtgtc ccttccaggc gtggtcgatg ggagagctgc
     1261 tgcggctcga ccgggtagtg ctcgcggcac cggtctccgc ggcgggaccc aggcgggtca
     1321 tggagggcgc gagatgatcc ccgcgacccc ggtgcgtgtc gtcatcctgg gtggcggctt
     1381 cggcggccta ttcaccgcca tcgagctcga aaagcgctgg cccagggagg tgccgctcga
     1441 cctcaccctg gtgagccggg acaaccacat gctcttcacg cccatgctgc acgaggtggc
     1501 ggcgagcgat gtggacatca cccacgtggt gaatccagtc cgcaagctcc tcaagcgcgc
     1561 cgccttcttt gccggtgagg tcgaggcgat ctcactcgac gaccggtcgg tcaccgtctg
     1621 ccatgtcgac ggcggccacc ggcacgagct ccccttcgac cacgtggtgc tggcgctcgg
     1681 cagtgtcacc aacttcttcg gtctgcccgg gctcgcggaa cgggccctga cgatgaagtc
     1741 gctcggcgat gccatcacga tccggaaccg ggccatccag ctgctggagg aggcagactt
     1801 cgagtgcaag gccagcgagc ggcatgatct gctcacgttc gtgatcgccg gcggcggctt
     1861 cgccggtgtc gagaccgcgg cggccctcaa cgatttcctg cgcgatgcac tcgagttcta
     1921 cccccatctc ggccgggagc atctccgcgt catcctggtg catcccggca atgtcctgct
     1981 tcccgagctt gatccccgcc ttggcgaata cgccgggaag gagttgcggc gccaggggat
     2041 cgaggtccac ctgaatgcca aggtgacggg gatgtcggcg gacggcgtct gcctgggcga
     2101 tggcaccctg atctcgagcc gcaacctcat ctggacggct gggaccgcgg ccaatcccgc
     2161 gctcggaatg ttgccctgcg acaaggaccg gggacggatc gcggtcgatg ccacgctcgc
     2221 ggtgccgggc ttccccgggg tctgggcgct gggcgactgc gccgccatcc ccgatccgcg
     2281 caccgggaag caacagccgc cgaccgcgca gcacgcgatc cgggaggcga aggtggccgc
     2341 gacgaacatc atcgcgcagg tcaccggccg gccgctggtg gaattccggt ttcccgggct
     2401 gggacagctc gccgccatcg gtcgccgccg gggtgtggcg cagatcctgg gtatccggtt
     2461 cagcgggttc ctggcctggt ggctgtggcg gaccatctac ctcagcaagc tgccgcggct
     2521 ggagcgcaag atccgggtgg cgctcgactg ggcgctcgac ctggtcttca gcaaggacat
     2581 cgtccagttc cagaccttcc g
//
LOCUS       DATIFF010000619         1040 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_540365, whole genome shotgun sequence.
ACCESSION   DATIFF010000619 DATIFF010000000
VERSION     DATIFF010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_540365"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(5..862)
                     /locus_tag="VLD58_09225"
     CDS             complement(5..862)
                     /locus_tag="VLD58_09225"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HSB54525.1"
                     /translation="MRTTLLGAAMLSLALPFAPLGAQDHAHAHGRLGVMLGGTDPGAD
                     SAGARVRAVMPDSPADAAGLRRGDVITRLNGTPLDGSRKLVELARGLQPGDTVRLEYR
                     RDGATRTATLVADRMESRIDMSFREMPGPGRHGEGMGPGIEMHMPGMDMHMMMFRHHA
                     GLELVEMGKDLGEYFGTSEGYLVVKPPADSASPLKAGDVIMAIDGRKPQSVEHAFEIL
                     HSYAPGEKAKFDVMRKKQRTTLTWVAPARHPGREWRGRMERSEGPEPADLFEMQLPAL
                     ESFLGSGET"
BASE COUNT          144 a          365 c          355 g          176 t
ORIGIN      
        1 agtatcaggt ttctcccgaa cccaggaagg attcgagggc cgggagctgc atctcgaaca
       61 ggtctgccgg ctccggtccc tcgctccgct ccatgcgccc gcgccactcc cgtccaggat
      121 gccgcgccgg cgccacccac gtcaacgtcg tgcgctgctt cttgcgcatc acgtcgaact
      181 tggccttctc gcctggcgcg taggagtgca ggatctcgaa tgcgtgctcg accgattggg
      241 gcttccggcc gtcgatcgcc atgatcacgt ccccggcctt gagcggcgac gcggagtcgg
      301 caggcggctt cacgaccaga tatccctcgc tggtcccgaa gtactcaccg aggtccttgc
      361 ccatctcgac gagctcaagc ccggcgtgat gccggaacat catcatgtgc atgtccatgc
      421 ccggcatgtg catctcgatg ccgggcccca tgccctcgcc gtggcggccg gggccgggca
      481 tctcccggaa gctcatgtcg atccgagact ccatccggtc cgccaccagc gttgcggtcc
      541 tggtggcgcc gtcccggcgg tactcgagcc ggaccgtgtc acccggttga agcccccgag
      601 ccagctcgac cagcttgcgg gagccgtcga gcggggtgcc gttcaagcgg gtgatcacgt
      661 cgcctcgacg cagtccggcg gcgtcggcgg ggctgtccgg catgaccgcg cgcacacgcg
      721 cgccggcgct gtccgccccc gggtcggtgc cgcctagcat gacccccagc cggccatgcg
      781 cgtgggcatg gtcctgggcg ccgagcggag cgaaaggcag ggcgaggctc agcatcgccg
      841 cgccaagaag ggtggttcgc atgttggtct ccgtggtggg ggcctgagtt cctagatgga
      901 tgcgggagga gggaagaccg tcgcgactac cgcccctcgg gctcgacgta cttgtccttg
      961 agcgcgtcga ccagcggtcg ccagtcggga ggtgcgccgg tggcccgctc gaccagctgc
     1021 ttgggcgtga agcgctggcc
//
LOCUS       DATIFF010000620         1779 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_847343, whole genome shotgun sequence.
ACCESSION   DATIFF010000620 DATIFF010000000
VERSION     DATIFF010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_847343"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..905)
                     /locus_tag="VLD58_09230"
     CDS             complement(<1..905)
                     /locus_tag="VLD58_09230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54526.1"
                     /translation="MNRPARRILIGVGAVLALLLLLLVLVPVLFAGRISDRVKTELNR
                     TLLAEVDWRGAGIGFFHDFPNLTLTLDDFTIVGVNRFAGDTLAAIPRFRVVVNLASAI
                     RAGLGGPAPIVVRAIELDRPRIALQALDDSTANWNITRPDTTKAQPAEAGKPMALSLE
                     RFDLTDANIRLDNRPARLKAAVVGLSQTLSGDFSRDQVGIETRAHADSVTVEFAGIPY
                     LNQVRLDLSLDATADMVKKAVTLKQSGLRLNDLTLALSGSVASAPDRLGLDLTFGAPK
                     TDFKSILSLVPAVYAKDFASVQTTGA"
     gene            1321..1626
                     /locus_tag="VLD58_09235"
     CDS             1321..1626
                     /locus_tag="VLD58_09235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54527.1"
                     /translation="MLYQAKDGSGGKILNFVSGGTVQAQLVYDPAADVTTGSGVLVGH
                     DGSVPWHFWSIGFGQPALNFIGALANGDVISALMGTGVDVVACSTAVGCSLVTLQIQ"
BASE COUNT          278 a          590 c          647 g          264 t
ORIGIN      
        1 gcgccggtgg tctgcaccga ggcgaagtcc ttggcgtaca ccgccggcac cagcgagagg
       61 atgctcttga agtcggtctt gggcgcgccg aaggtgaggt cgagccccag ccggtcgggg
      121 gcggaggcca ccgagccgga cagcgcgagg gtgaggtcgt tgagccggag cccgctctgc
      181 ttcagggtga cggccttctt caccatgtcg gccgtggcgt ccaggctcag gtccagccgc
      241 acctggttga ggtaggggat cccggcgaac tccaccgtca ccgagtcggc gtgggcccgg
      301 gtctcgatcc ccacctggtc ccggctgaag tcgccgctca gggtctgact caggcccacg
      361 acggcggcct tgagccgggc cggacggttg tcgaggcgga tgttcgcgtc ggtgagatcg
      421 aagcgctcca ggctcaacgc catcggcttc cccgcctcgg cgggttgcgc cttggtcgtg
      481 tcggggcggg tgatgttcca gttcgcggtg ctgtcgtcca gcgcctggag cgcgatgcgc
      541 ggccggtcga gctcgatggc gcgcaccacg atcggggccg ggccgccgag cccggcgcgg
      601 atggcgctgg cgaggttcac caccacccgg aagcgcggga tcgcggccag ggtatcgccg
      661 gcgaaccggt tcaccccgac gatggtgaag tcgtcgagcg tgagggtcag gttggggaag
      721 tcgtggaaga agccgatccc cgcgccccgc cagtccacct cggcgagcag ggtgcggttg
      781 agctcggtct tcacccggtc ggagatcctg ccggcgaaga gcaccggcac caggacgagg
      841 agcagcagga ggagcgcaag cacggccccg acgccgatca ggatccggcg cgccggtcga
      901 ttcatgaggt gacctcgaag ttgcggaacg taccccggtc cgaaaactag cgcccttcta
      961 ccggcggagg ctcccgtggt gcctcgccgt tcccggcatt ccgccagtac gctgggttcc
     1021 caccgcggcg ccccggaaac ctatccccct gccgactaac gccttggagg gggaaccgtc
     1081 aacaacgatc cgaccaccaa cggtggctgg cccaatgccg acggcagcac gccgaccccg
     1141 atcccggtgg tgctagggcc tgggcacctg cgggcccaac ggaatctgga ccgcgcccga
     1201 cggcagtcag tacgggccct acaacccgaa ctgcctcctg tacgcctccg acagcacggc
     1261 ggggaacaac ggcaagggat tctgcgtcac ttccgacgcg ggcgagcccc ggcgcaggcg
     1321 gtgctctacc aggcgaagga cggctcgggc gggaagatcc tgaacttcgt gagcggcggg
     1381 acggtccagg cgcagctggt gtacgatccc gccgcggacg tcacgaccgg ctccggcgtg
     1441 ctggtcggtc acgacggctc ggtgccctgg catttctggt cgatcggctt cggacagccg
     1501 gcgctcaact tcatcggcgc cctcgccaac ggggacgtga tctcggccct gatggggacc
     1561 ggcgtggacg tcgtcgcctg cagcaccgcg gtagggtgct cgctggtgac actgcagatc
     1621 cagtagaagc gtggggtgac ggcgctcatg gcgctgaagc cgtgagcctc tggaagcggg
     1681 gattgcgccg cagcggatcg aaggtgggat ccacccggag ccacccgggc gtgagatagt
     1741 agttggcccg gagcagcggc tcgatcaggt cgagcgccc
//
LOCUS       DATIFF010000621         2842 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1925402, whole genome shotgun sequence.
ACCESSION   DATIFF010000621 DATIFF010000000
VERSION     DATIFF010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2842
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1925402"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..834
                     /locus_tag="VLD58_09240"
     CDS             <1..834
                     /locus_tag="VLD58_09240"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine dehydratase"
                     /protein_id="HSB54528.1"
                     /translation="CENLQLAGAFKLRGAFNFISQLDQGARSCGVLTYSSGNHGQAVA
                     WAANRFGIRSVVVMPESAPGVKVAGVKRHGGEVVFAGRTRSPEQQVRAERFVTEEGLA
                     MIPPFDHADVIAGQGTAGLEILDQVPDVATVLVPVGGGGLLSGITAAIKALEPGVEII
                     GVEPAGAPKLSKALEGGHPVTLGPTESLADGLLTRAVGALPWAVIQPHVHRAITVTDA
                     EIGHAVKWLFEHQGLRVEPSGAVTVAAVLAGKFATSAPTVAVLSGGNVDPELFARLVA
                     A"
     gene            831..2261
                     /locus_tag="VLD58_09245"
     CDS             831..2261
                     /locus_tag="VLD58_09245"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HSB54529.1"
                     /translation="MSLAPKILVADDDQALTRTLSWILKENEYEVVAVTNGEHLLDRL
                     RADQYDLLLLDIMMPGADGLQLLERVKSDPSLRHVPVLMISSMPPEEATVRALGLGAA
                     DFISKPFRVRELLARVKAHLRVGRELNQARAEARTRSEMVDILQEVTASLKPDEIYHI
                     LVRRVARGLKISKCSLIFATPGEEEATVVASYENPMLRNLRIGLNRYPEIRRALDTRQ
                     TVLVTDVATDPLYAQARTEWEAEGFQVPTRSAIAIPFVMKDQRAGVFFLRTTEEDTPL
                     NHSDVAFAEQVIKAASQALDKAYDLESAVLGREQMKQLAETDPLTETYNRRALAEKLV
                     QEIERANRYNTMLACLMVDVDNFKHINDAHGHIVGDGVLRQLGAILRREQRTVDIVAR
                     YGGEEFVVLLPETATSGARIFAERIIKKVASQNFGEDGRQVHVTISVGIACYPDQRVT
                     DSESLLHLADQNLYKAKLDGRNRYRD"
     gene            2258..>2842
                     /locus_tag="VLD58_09250"
     CDS             2258..>2842
                     /locus_tag="VLD58_09250"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB54530.1"
                     /translation="MSSRRCPRCNRVYADPARFCPQDGSPLVEVSGATPPPGSGGAEG
                     GQTSAGLRTLVRQAALKRGPGLDKASTLTNQLLDQRYQVGKRLGEGGMSYVYLAKDVT
                     TNETVAIKVLTPKLKEDKSSVERLRREAGLAMRLEHPNVCKIFRLGETEDGLIYLVMP
                     YLPGELLSDREVRSGALAVDFGVPLLVQMCRGLQH"
BASE COUNT          468 a          954 c          994 g          426 t
ORIGIN      
        1 tgcgagaacc tgcagctggc gggcgcgttc aagctgcgcg gcgcgttcaa cttcatcagc
       61 cagctggatc agggtgcgcg gagctgcggc gtcctcacgt actcgtcggg gaatcacggg
      121 caggccgtgg cctgggcggc caaccgcttc ggcatccgga gcgtggtggt gatgcccgaa
      181 tccgcacccg gggtaaaggt ggccggtgtg aagcggcacg gcggcgaggt ggtcttcgcc
      241 ggccgcaccc gttcgcccga gcagcaggtc cgggccgaac ggttcgtgac cgaggaaggg
      301 ttggcgatga tcccgccgtt cgatcacgcc gatgtgatcg cggggcaggg caccgcgggc
      361 ctcgagatac tcgaccaggt gcccgacgtc gccaccgtgc tggtgccggt gggcggcggc
      421 ggcctcctct cgggaattac cgccgcgatc aaggcgctcg agccgggtgt cgagatcatc
      481 ggggtcgaac ccgccggcgc gcccaagctg agcaaggcgc tggagggtgg gcacccggtg
      541 acgctgggcc ccaccgagag cctggccgat ggcctcctga cccgcgcggt tggcgcgctg
      601 ccctgggcag tgatccagcc tcacgtccat cgcgccatca ccgtgaccga tgccgagatc
      661 ggccatgcgg tgaagtggct cttcgagcat caggggctcc gggtggagcc ctccggcgcg
      721 gtcaccgtgg ccgcggtgct ggccgggaag ttcgcgacca gcgccccgac cgtcgccgta
      781 ttgagcggcg gcaacgtcga ccccgagctg ttcgcgcggc tggtggcggc atgagcctgg
      841 ccccgaagat cctggtggcc gacgatgacc aggcgctgac ccgcaccctc tcctggattc
      901 tcaaggagaa cgagtacgaa gtcgtggccg ttaccaacgg cgagcatctg ctcgaccggt
      961 tgcgggccga ccagtacgat ctcctgctgc tcgacatcat gatgccgggc gccgacgggc
     1021 tccagctgct ggagcgggtg aaaagcgatc cctcgctccg tcatgtgccg gtgctgatga
     1081 tctcctcgat gccgccggaa gaggccacgg tgcgcgccct gggactcggc gccgccgatt
     1141 tcatcagcaa gcccttccgg gtgcgcgagc tgctggcgcg ggtgaaggcc cacctccggg
     1201 tgggacggga gctcaaccag gcccgggccg aagcccggac ccgctcggag atggtggaca
     1261 tcctgcagga ggtcaccgcc tccctcaagc cggatgagat ctaccatatc ctggtgcggc
     1321 gggtggcccg gggactcaag atctcgaagt gctcgctgat cttcgcgacc ccgggtgagg
     1381 aggaggccac cgtggtggcc tcctacgaga acccgatgct ccgcaacctc cgcatcgggc
     1441 tcaaccgcta tcccgaaatc cggcgggcgc tcgacacccg gcagacggtg ctggtgaccg
     1501 acgtggccac cgatccgctc tatgcccagg cccggaccga gtgggaagcg gaggggttcc
     1561 aggtcccgac ccggtcggcg atcgcgatcc cgtttgtgat gaaggaccag cgggccggcg
     1621 tcttcttcct gcgcaccacc gaggaagaca ccccgctcaa ccactcggat gtggccttcg
     1681 ccgagcaggt gatcaaggcg gcgtcgcagg cgctggacaa ggcctacgat ctcgagagcg
     1741 cggtgctggg ccgggagcag atgaagcagc tggccgagac cgatccgctc accgagacct
     1801 acaaccggcg ggccctggcc gagaagctgg tgcaggagat cgagcgcgcc aaccggtaca
     1861 acacgatgct ggcgtgcctg atggtggacg tcgacaactt caagcacatc aacgacgccc
     1921 acgggcatat tgtgggcgac ggggtcctgc gccaacttgg ggccatcctg cggcgggaac
     1981 agcgcaccgt cgatatcgtg gcccgctacg gcggcgagga gttcgtggtg ctcctccccg
     2041 agaccgcgac cagcggggcc cggatcttcg cggaacgcat catcaagaag gtcgccagcc
     2101 agaatttcgg ggaagacggc cggcaggtcc atgtgacgat cagtgtcggg atcgcctgtt
     2161 atcccgacca gcgggtgacc gacagcgaga gcctgctcca tctcgccgac cagaacctct
     2221 acaaggccaa gctcgacggc cgcaaccggt accgcgattg agcagccgcc gttgtccccg
     2281 gtgcaaccgg gtctacgccg atccggcccg cttctgtccc caggacggga gtccgctggt
     2341 cgaggtctcc ggcgccacgc ccccgccggg ctcgggcggg gccgagggcg ggcagaccag
     2401 cgccggtctc cggaccctgg tgcgccaggc cgcgctcaag cgcgggcccg ggctcgacaa
     2461 ggccagcacg ctcaccaacc agctgctcga tcagcgctac caggtcggca agcggctggg
     2521 cgaaggcggg atgagctatg tctatctcgc caaggatgtg accaccaacg agaccgtcgc
     2581 catcaaggtg ctgacgccca agctcaagga ggacaagagt tcggtcgagc ggctccggcg
     2641 cgaggcgggt ctcgccatgc gcctcgagca tcccaacgtc tgcaagatct tccggctggg
     2701 cgagaccgag gatgggctca tctacctggt gatgccctac ctccccggcg agctcctctc
     2761 cgaccgggaa gtgcgctccg gggcgctggc ggtggatttc ggggtgccgc tgctggtcca
     2821 gatgtgccgc ggcctgcagc ac
//
LOCUS       DATIFF010000622         3969 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_234224, whole genome shotgun sequence.
ACCESSION   DATIFF010000622 DATIFF010000000
VERSION     DATIFF010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3969
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234224"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..606)
                     /locus_tag="VLD58_09255"
     CDS             complement(<1..606)
                     /locus_tag="VLD58_09255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54531.1"
                     /translation="MRRQLGSAVGLMLSVLVVNSAAAQWNVARFDTGRNRMYTTFGLD
                     PAFVSTVGYGRVVRPFGHSVQLTGDIGLAAAHLDTRDFRARLGMQTSILHWRSLRMTG
                     SATFITRGTENSIYRALNFGSDLTGTLGVYRHGWFAAGEFGFDKAIITHLTHSDWSRK
                     YYYPDAKDGWYLNAGGVFHYGATAGVSLGRVEVSGRFGWRRT"
     gene            complement(603..1592)
                     /locus_tag="VLD58_09260"
     CDS             complement(603..1592)
                     /locus_tag="VLD58_09260"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSB54532.1"
                     /translation="MQQLKWLTMTAAVLGTAACQTMSPGEAGNLVPKTVAEDPSLPAI
                     DMNGSRFHLQTMGNPANPAIVFLHGGPGGDYRSMLRMAELADSYYLVFWDQRGAGLSM
                     RHGRTLLTIDTYLADLDSLVERYSPGRPVYLIGVSWGGMYATAYINEHPGRVAGAVLI
                     EPGPLDGSTAERLKDDIVDFDLGAEWLNDMVWSSQFLGSDDHARMDYERLLGVRDAQP
                     RFHLSKADPEMGWRLGAAASKYIMEDGQDGHGHFNYDFTTHLSAYATPVLFVAGSMSE
                     VLGESLQQIQVHRYPSASLEVVQGAGHDVAWVKAAEVVALIRGYLTEREGGAR"
     gene            complement(1749..2939)
                     /locus_tag="VLD58_09265"
     CDS             complement(1749..2939)
                     /locus_tag="VLD58_09265"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSB54533.1"
                     /translation="MASLTLDWLHLIALLGAVQGVFLTGVLAARRKNRTANRLLAAAI
                     FAFTVYLASAVYHSAGLVPVFPHFFGFSYPLPFAFGPLIYLYAVTAADRSRRLGWRDA
                     LHFLPFLATVAAGVPIYLMSGAEKVALFADLQSGIRPPLLKIADPLKFVSGVTYATLT
                     MLFLRRHRDRVKESYSSLEPVNLRWLLLLGGGAAGIWLLALSLQLIESSGLARIGRAD
                     DYISLAIAVLVYAIGYMGLRQPEVFRYETAEYPVQVAVAPAESKPAPAPEAEAPRYER
                     SGLSEPEAGRLRGALEAVMDKDRPWQDSELTLADLAERLSTTPHKLSEVLNTEVGQTF
                     YDFVNCYRVREVQRRIAAGDGSRLTILALALEAGFASKSTFNLVFKKHTGQTPSEYRQ
                     AAGV"
     gene            3076..3543
                     /locus_tag="VLD58_09270"
     CDS             3076..3543
                     /locus_tag="VLD58_09270"
                     /inference="COORDINATES: protein motif:HMM:NF016213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HSB54534.1"
                     /translation="MVLLLVGLVLVPLGLPGLWVMVLAIIGYGALTDFRGVGLKTMIL
                     IIALAAIGELIEWWVGFKFARRYGGTRRAGWGALIGGLAGAMAGIPIPVLGSVIGSFF
                     GSFVGAAIFEYTAAPANAIRTGWGALLGRMWATATKMSLGLIMAVVAIFAALS"
     gene            complement(3544..>3969)
                     /locus_tag="VLD58_09275"
     CDS             complement(3544..>3969)
                     /locus_tag="VLD58_09275"
                     /inference="COORDINATES: protein motif:HMM:NF014609.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HSB54535.1"
                     /translation="HDPVVASVGIPFVLVEVTQEALGQALPQLEVFRQVLRDWKALEG
                     RLSVFLYSHAGAGQVRARMFAPVAGTWEDPATGSASATLVALLLSKSDAAELRIDITQ
                     GVEMGRTSRISAHAWRTAEGVRSAVAGDAVMICRGEVLL"
BASE COUNT          669 a         1346 c         1308 g          646 t
ORIGIN      
        1 cgtcctccgc cacccgaacc gcccgctgac ctccacccgc ccgagcgaca cccccgctgt
       61 cgccccgtag tgaaagaccc cgcccgcatt gagataccag ccgtccttgg catcggggta
      121 gtagtacttc cgggaccagt cgctatgggt gagatgggtg atgatcgcct tgtcgaagcc
      181 gaactccccc gcggcgaacc acccatggcg atagacaccg agcgtgccgg tgagatcgga
      241 cccgaagttg agtgcccggt agatcgagtt ctcggtgccg cgagtaataa acgtggcgct
      301 gccggtcatc cggagcgagc gccagtgcag gatcgaggtc tgcatgccga gccgcgcccg
      361 gaagtcgcgg gtatcgagat gcgccgccgc gagcccgatg tctccggtga gctgcacgct
      421 gtggccaaag ggtcggacca cccgcccgta cccgaccgtc gagacgaacg ccggatcgag
      481 cccgaaggtg gtgtacatcc ggttccgccc ggtgtcgaac cgggccacgt tccactgcgc
      541 cgctgcgctg ttgaccacca gcaccgacag catcagcccc accgcactcc ccagttggcg
      601 cctcatcggg cacctccttc ccgctcggtc aggtacccgc gaatcagggc cacgacctcc
      661 gccgccttca cccacgccac atcatgtccc gcgccctgca ccacttcgag tgacgccgag
      721 gggtagcgat gtacctgaat ctgctgcagc gattcgccca gcacctcgct catcgatccc
      781 gccacgaaca gcaccggcgt ggcgtacgcc gagaggtggg tggtgaagtc gtagttgaaa
      841 tgcccgtgtc catcctgccc gtcttccatg atgtacttcg acgccgccgc gcccagtcgc
      901 cagcccattt ccggatcggc cttgctgaga tggaacctcg gctgggcgtc gcgcacgccg
      961 agcaggcgtt cgtaatccat gcgcgcatga tcatccgacc ccaggaactg gctgctccac
     1021 accatgtcgt tgagccactc ggcgccgaga tcgaagtcga cgatgtcgtc cttgaggcgc
     1081 tccgcggtgc tgccgtccag cggacccggc tcgatcagca ccgctcccgc gacccgtccg
     1141 gggtgctcgt tgatgtaggc ggtggcgtac atccctcccc acgagacgcc gatcaggtac
     1201 accggccgtc ccggggagta gcgctcgacc agcgagtcaa ggtcggcgag ataggtgtcg
     1261 atggtgagca gggtgcggcc atgccgcatc gagagccccg ccccccgctg gtcccagaag
     1321 accaggtagt agctgtcggc cagctccgcc atgcggagca tcgagcggta gtcgcccccc
     1381 gggccgccgt gcaggaacac gatggccgga ttggccgggt tgcccatcgt ctggagatga
     1441 aagcgggaac cgttcatgtc gatggcgggg agactcgggt cctccgccac cgtcttcggc
     1501 accaggttcc ccgcctcccc cggcgacatg gtctggcagg cggcagtccc cagcaccgcc
     1561 gcggtcatgg tgagccactt caactgctgc atcgttcccc ccaattgctg tgagtcccgg
     1621 aaagaccgga ggccggtcgg cttcggggcg caggatagga tttgtcgggg gaaggctcga
     1681 ccgggccggt cggactggac gtgcggatgg ttcggacggg atggatcgac gctgaatggc
     1741 cgaaaaggct acacgccggc cgcctggcgg tactccgagg gcgtctgccc cgtgtgtttc
     1801 ttgaagacca ggttgaaggt ggacttcgag gcaaatcccg cctcgagcgc cagggccagg
     1861 atggtgaggc ggctgccatc gcccgccgcg atgcggcgct ggacctcccg gacccggtag
     1921 cagttcacga agtcgtagaa ggtctgacct acctcggtat tgagcacctc ggacagcttg
     1981 tgtggtgtgg tggagagccg ctcggcgagg tcggccaggg tgagctcact gtcctgccag
     2041 ggccggtcct tgtccatgac cgcctcgagc gcgcccctga gacgcccggc ctccggctcc
     2101 gagagtcccg atcgctcgta acgcggcgcc tcggcttcag gtgccggtgc cggcttcgac
     2161 tctgccggcg ccacggccac ctgcaccgga tactccgccg tctcgtagcg gaagacctcc
     2221 ggttgcctga gacccatgta cccgatggcg tagaccagca ccgcgattgc cagcgagatg
     2281 tagtcatcgg cgcggccgat ccgcgccagg ccgctcgact cgatcagctg gagcgagagt
     2341 gccaggagcc agatcccggc cgcgccaccc ccgagcagaa ggagccagcg caggttgacc
     2401 ggttcgagcg aggaatagct ctccttgacc cggtcgcggt gccgccgcag gaacagcatg
     2461 gtgagggtcg cataggtgac gccggaaacg aacttgagcg gatccgcgat cttgagcagc
     2521 ggcggccgga ttccgctctg gaggtccgcg aagagcgcca ccttctccgc tccgctcatg
     2581 agatagatcg gaaccccggc tgcgaccgtc gctaggaacg gcaggaaatg gagcgcgtcg
     2641 cgccagccga gccggcggga ccgatcggcg gcggtgacgg cgtacagata gatgagcggg
     2701 ccaaacgcga agggcagtgg atacgagaaa ccgaagaagt gcggaaagac cggcaccagc
     2761 cctgccgagt ggtacacggc agaggcgagg tataccgtaa aggcgaagat agctgcggcg
     2821 agaagccggt tggcggtgcg gttctttcgc cgggcggcga gcacgccggt caggaagact
     2881 ccctggaccg cgccgagcag cgcgatcagg tggagccagt cgagggtgag gctcgccatg
     2941 gggggataat accgaattcc ggaccggacg catcgtggtc cattcaccgg ccgaaacccc
     3001 gtagagtcat tccgagtaca attcgaacag cctcaaccgg agatctctct ggaagcgctc
     3061 tatctcccgc tgcttgtggt cctgctgctc gtcggcctgg tgctggtgcc gctcgggctg
     3121 ccggggctct gggtgatggt gctggcgatc atcggctacg gcgccctcac cgatttccgc
     3181 ggggtcgggc tcaagaccat gatcctcatc atcgccctgg cggcgatcgg cgagctgatc
     3241 gaatggtggg tggggttcaa gttcgcgcga cgctacggcg gcacccggcg ggcgggttgg
     3301 ggtgccctga tcggcgggct cgccggggca atggcgggga tcccgattcc cgtccttggc
     3361 agcgtgatcg ggtcgttctt cggctcgttc gttggggcgg caatcttcga gtacaccgcg
     3421 gctcccgcca acgccatccg caccggctgg ggcgccctgc tcggccggat gtgggccacc
     3481 gccaccaaga tgtcgctcgg cctgatcatg gcggtggtgg cgatcttcgc cgcgctctcc
     3541 tgactacaac agcacctcgc cacggcagat catcacggcg tcacccgcca ccgccgagcg
     3601 cacgccctcg gcggtgcgcc aggcgtgagc gctaatcctg ctggtcctcc ccatttccac
     3661 accctgagtg atgtcgatcc gcagctcggc ggcgtcgctc ttcgaaagca gcagtgccac
     3721 aagcgtcgcg ctggcgctac ccgtggccgg gtcttcccac gtgccggcga cgggagcgaa
     3781 catccgcgcc cgcacctggc ccgcgcccgc gtgagaatag aggaaaaccg agagccttcc
     3841 ctccagtgct ttccagtccc gcagcacctg ccggaacact tccagctgag gcagcgcctg
     3901 gcccagagct tcctgggtca cctccaccag cacgaacggg atgccgactg acgccaccac
     3961 cgggtcgtg
//
LOCUS       DATIFF010000623         2202 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1310092, whole genome shotgun sequence.
ACCESSION   DATIFF010000623 DATIFF010000000
VERSION     DATIFF010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2202
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1310092"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..426
                     /locus_tag="VLD58_09280"
     CDS             <1..426
                     /locus_tag="VLD58_09280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54536.1"
                     /translation="VLPPGQHHDAATDHLIIAGGNGPATTPDTVPGLVNGSATPASLT
                     LAAGRLNRLRLISIDPDHRIVFTLLRDSTVVGWKALAKDGADLPPSLIADHRAEVMTG
                     PGETADFGYTPKPGEVLTLRVSAPFADRPWTRTLLLKAP"
     gene            423..1736
                     /locus_tag="VLD58_09285"
     CDS             423..1736
                     /locus_tag="VLD58_09285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSB54537.1"
                     /translation="MTLLERLGLHRKDLRAWAMYDWANSAMVTTIVTAVFPIYFAKVA
                     GADLAPAVATKRLADATTIGLAIIAVLSPIMGAIADRAGLKKRLLGLSLLVGVVAVGL
                     MFFIERGEWLFAAILFVVANIAVNASYVCYDSFLPHIARPEEMDRVSTAGYALGYVGG
                     GLLLALNLAWIQKPEWFGLPHGEGLSPSQATLPTRLAFLSVAIWWLVFSIPLFRDVPE
                     PPATGDGKVAIRGAIRELGQTFRRLGQFKQAVLMLLAFLIYNDGIGTIIRMATIYGTE
                     IGIGTGALIASIMIVQFVGIPFAFLFGSFAGRIGAKRAIFVGLVVYAGISLLGFYMRT
                     ATHFLVLALLVGMVQGGTQALSRSMFASMIPKDRSAEFFGFFAVVEKFAGIFGPWVFA
                     RVIGVTGSSRAAILAVAVFFFIGGGLLHFVDVEQGQREARAAEAA"
     gene            1775..>2202
                     /locus_tag="VLD58_09290"
     CDS             1775..>2202
                     /locus_tag="VLD58_09290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54538.1"
                     /translation="MQRPGGVTLIAVLSLLSGVISVLKGLAWLGIGGLVAGGLTVSAH
                     PVAGFMVGIVAVVFGVLALATGGFALVFSFGAFGLRPWAWTMGVLTHGLIVIWSLLAA
                     LGPGRLSERWLGLLVSSAILYYLTRPDIKAAFGRSQGLAGP"
BASE COUNT          294 a          754 c          739 g          415 t
ORIGIN      
        1 gtactgccac cgggccagca tcatgacgcc gcgaccgacc acctgatcat cgcaggtgga
       61 aacgggcccg ccacgacgcc cgatacggta ccgggcctgg tgaatggcag cgcaactccc
      121 gcctccctca cactcgcggc cggcagactc aaccggctcc ggctcatcag catcgacccg
      181 gatcaccgga tcgtcttcac tctccttcgg gactcgaccg tggtaggctg gaaggcgctc
      241 gcgaaggatg gcgccgacct tccaccctcg ctgatcgccg accatcgcgc cgaggtcatg
      301 accggaccgg gcgaaaccgc ggacttcggc tacacaccga agcctggtga agtgctcacc
      361 ctccgggtct cggcgccgtt cgccgaccgt ccctggaccc gaaccctcct cctcaaggcg
      421 ccatgacact gctcgagcgg ctgggcctgc accgcaagga tctccgcgcc tgggcgatgt
      481 acgactgggc caactccgcg atggtcacca ccatcgtgac cgcggtcttt ccgatctatt
      541 tcgccaaggt ggcgggcgcc gatctcgccc cggcagtggc caccaagcgg ctggccgatg
      601 cgaccacgat cgggctcgcc atcatcgcgg tgctgtctcc catcatgggc gccatcgccg
      661 accgggcggg cctcaagaag cggctcctcg gtctctcgct cctcgtcggc gtggtggcgg
      721 tggggctgat gttcttcatc gagcgggggg agtggctctt cgccgccatt ctgttcgtcg
      781 tcgccaacat cgcggtgaat gccagctacg tctgctacga ctccttcctg ccgcacatcg
      841 ccaggccgga agagatggac cgggtctcga ccgccggcta cgccctgggc tacgtgggtg
      901 gcgggctcct gctggccctg aacctggcgt ggatccagaa accggaatgg tttggcctgc
      961 cgcacggcga ggggctgagc ccgtcccagg ccacgctgcc gacccggctt gccttcctct
     1021 cggtggcgat ctggtggctg gtcttctcga ttccgctgtt ccgggacgtt cccgaaccgc
     1081 cggcgaccgg cgacggcaag gtggccattc gcggcgccat ccgcgagctg ggccagacct
     1141 tccggcggct ggggcagttc aagcaggcgg tgctgatgct gctcgcgttc ctgatctaca
     1201 acgacgggat cggcaccatc atccgcatgg cgacgatcta cggcaccgag atcgggatcg
     1261 gcaccggggc cctgatcgca tcgatcatga tcgtccagtt cgtcggaatt ccgtttgcct
     1321 tcctcttcgg gagcttcgcg gggagaatcg gcgccaagcg ggccatcttc gtgggcctcg
     1381 tggtctacgc cggcatcagc ctgctcggct tctacatgcg gacggcgacc cacttcctgg
     1441 tcctggcact cctcgtcggc atggtgcagg gcggaaccca ggcgctctcc cgctcgatgt
     1501 tcgccagcat gattccgaag gaccgctcgg ccgaattctt cggcttcttc gccgtagtcg
     1561 agaagttcgc cgggatcttc ggcccctggg tcttcgcgcg ggtgatcggg gtcaccgggt
     1621 cgagccgggc ggcgatcctc gccgtggcgg tgttcttctt catcggcggg gggttgctcc
     1681 acttcgtgga tgtcgagcag ggccagcggg aagcgcgggc cgcggaggcg gcctgacccg
     1741 ctactattga agcgtccctg gtttcggagg aagcatgcag cggcccggtg gggtcaccct
     1801 gatcgcggtg ctgtcgctcc tgtcgggcgt catcagcgtc ctcaagggac tcgcctggct
     1861 cggtatcggc ggcctggtcg ccggcgggct caccgtgtcg gcccatccgg tcgcgggctt
     1921 catggtcggg atcgtcgcgg tggtgttcgg ggtgctggcg ctggcgaccg gcgggttcgc
     1981 cctggtgttc tccttcggcg cgttcgggct ccggccctgg gcctggacca tgggtgtgct
     2041 gacgcacggg ctcatcgtga tctggtcgct gctcgccgcg ctggggccgg gccggctctc
     2101 ggaacgctgg ctggggctgc tggtgagtag cgcgatcctg tactatctga cccggccgga
     2161 catcaaggcc gccttcggac gcagccaggg acttgcggga cc
//
LOCUS       DATIFF010000624         1173 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2232586, whole genome shotgun sequence.
ACCESSION   DATIFF010000624 DATIFF010000000
VERSION     DATIFF010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2232586"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..733)
                     /locus_tag="VLD58_09295"
     CDS             complement(<1..733)
                     /locus_tag="VLD58_09295"
                     /inference="COORDINATES: protein motif:HMM:NF014346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSB54539.1"
                     /translation="MRVRLLGTLLLLASPLAAQGRFPPDSLKNLQVLPATMTPREVVD
                     LMRGFATSLGVRCVYCHVGEEGQPLSAIDFAKDDRRTKKVAREMYEMMGRINRETIAK
                     LPERPDTGLTVTCSTCHRGVARPVPIERLLAQTVAASGVDSAVRAYRALRDRYYGRAA
                     YDFGELPLMGVATDFSRLKKFDEAVALLNLGNEYFPKSGNVMMALGETYRAKGDTASA
                     IKSYREALVRDPQNGQARQRLTQLGV"
     gene            855..>1173
                     /locus_tag="VLD58_09300"
     CDS             855..>1173
                     /locus_tag="VLD58_09300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54540.1"
                     /translation="MRIALLGALLLAAPLPAAAQVPGPREGDYIARNFTFTTGETLPE
                     LRLHYTALGQPVKDAAGVTRNAVLIMHGTTGSGRGFLSANFAGQLFGPGRLLDTTKYF
                     VILP"
BASE COUNT          168 a          423 c          395 g          187 t
ORIGIN      
        1 gcacgccgag ctgggtcagc cgctggcgcg cctggccgtt ttgcgggtcg cggaccagcg
       61 cctcccggta ggacttgatc gccgacgcgg tgtcgccctt ggcgcggtag gtctctccga
      121 gggccatcat cacgttcccg ctcttcggga aatactcgtt cccgaggttg aggagggcga
      181 ccgcctcgtc aaacttcttc agtctggaga agtcggtggc cacccccatc agcggtagct
      241 ccccgaagtc ataggcggcc cggccgtagt agcggtcccg cagggcgcga taggcccgga
      301 cggcggaatc cactcccgag gcggccaccg tctgggcgag gaggcgctcg atcggcaccg
      361 ggcgggccac gccccggtga caggtgctgc aggtcaccgt gaggccggtg tcgggccgct
      421 ccggcagctt cgcgatcgtc tcccggttga tccgccccat catctcgtac atctcgcggg
      481 ccaccttctt ggttcggcgg tcgtccttgg cgaagtcgat cgcgctgagc ggctggccct
      541 cctcccccac gtgacagtac acgcagcgca ccccgagcga ggtcgcgaac ccccgcatca
      601 ggtccacgac ctcgcgcggc gtcatcgtgg ccggaagcac ctggagattc ttgagcgaat
      661 ccgggggaaa tcgcccctgg gcggcgaggg gtgaggcgag caggagaagt gtgccgagca
      721 gtcgaacgcg catggagtgg cctctgcgat ccgggagttg gcggcttgcc tgccccggga
      781 gaataccatt ccgggacgcc cccggcgagc gccccgcttg cccccgcccg gaggcggcgc
      841 gatcttcgcg ccccatgcgc atcgcactcc tcggagccct gctcctcgcc gccccgctcc
      901 ccgccgctgc ccaggttccg ggaccgcggg aaggggacta catcgcccgg aacttcacct
      961 tcaccaccgg ggagacgctc cccgagctcc ggctgcatta cacggcgctg ggccagccgg
     1021 tcaaggatgc cgccggagtg acgcggaacg cggtgctgat catgcacggc accaccggca
     1081 gcggccgggg attcctgtcg gccaatttcg ccggccagct cttcgggccg ggccggctgc
     1141 tcgacaccac gaagtatttc gtgattctcc ccg
//
LOCUS       DATIFF010000625         1356 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_234776, whole genome shotgun sequence.
ACCESSION   DATIFF010000625 DATIFF010000000
VERSION     DATIFF010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234776"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..363)
                     /locus_tag="VLD58_09305"
     CDS             complement(<1..363)
                     /locus_tag="VLD58_09305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54541.1"
                     /translation="MTGADLLDIGREAFDRKAWAEAYANLWAADRDEPLGPEDLERLA
                     ITARLRGRDAESGDLWARAYQAHDRRGDPGRAARCAFWLAIELLLEGETARSGGWVSR
                     ARRLLGEGDCVEQGYLLVP"
     gene            508..870
                     /locus_tag="VLD58_09310"
     CDS             508..870
                     /locus_tag="VLD58_09310"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSB54542.1"
                     /translation="MSELDTRYQAAVKSHDAATMDRILADDFILVTGKGVVHTKAELL
                     AEAKSTDAVYEHQEDTQQTVRLWGSTAVVTALLWVKGTDKGKPFDYKLWFSDTYVRTP
                     GGWRYVFGQASIPLPAAP"
     gene            882..>1356
                     /locus_tag="VLD58_09315"
     CDS             882..>1356
                     /locus_tag="VLD58_09315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54543.1"
                     /translation="MIGPPLGTTPAGSGRARGYPRAFPADLLREASRRLAIISLVGAV
                     LWVIGPIMARVALWAMNPNDPRWRSPHPTDAIAAASILLSLGLFFYARRTDRDPRFIL
                     DLGLGYMILAAAAIGLVMHWEPPPAGFPPVPVITWVGAVVLMFAAIVPSTPGKTLV"
BASE COUNT          193 a          506 c          450 g          207 t
ORIGIN      
        1 cggaacgagc aggtagccct gctccacgca gtccccctcg ccgagcaggc ggcgggcgcg
       61 ggagacccag ccaccgctcc gggccgtctc cccctcgagc agaagctcga ttgccagcca
      121 gaacgcgcag cgggccgccc gtcccggatc gccccggcgg tcgtgcgcct ggtacgcccg
      181 cgcccagagg tcgccgctct cagcgtcgcg gccacgcagg cgggccgtga tcgccaggcg
      241 ctccaggtcc tccggcccga gcggctcgtc ccgatccgcg gcccagagat tggcgtaggc
      301 ctccgcccag gccttccggt cgaaggcttc ccggcctata tcgagcaggt ctgccccggt
      361 catggcagga atctgtaggg gcgatgcccg tcctttcaac ctcgggagaa cccgatgaaa
      421 ccccttctcg cttgcgcgct cgcaggcgtc atgctggcgc tcccgcaccg gggagcgggg
      481 ccctcacctc aggatgacag gaagaccgtg agcgagctgg atacccggta ccaggccgcg
      541 gtcaagagcc acgatgccgc gacgatggat cgcatcctgg ccgacgactt catccttgtg
      601 accggcaaag gcgtggtcca caccaaggcc gagctcctcg ccgaggcgaa gagcacggac
      661 gccgtctacg agcaccagga ggacacccag cagacagtcc gcctctgggg gagcacggcg
      721 gtcgtcacgg ccctcctctg ggtgaaaggc accgacaagg ggaagccctt cgactacaag
      781 ctctggttca gcgacacgta tgtgcgcacg ccgggcggct ggcgctacgt gttcgggcag
      841 gcctcgatcc cgctcccggc agcgccgtga ctggctcagg catgatcggc ccgcccctcg
      901 gcactacgcc cgccggctcc ggccgggcgc ggggataccc gcgcgcgttt ccggccgacc
      961 tgctccggga ggcgtcccgg cggctggcca tcatctcgct cgtcggcgcg gtgctctggg
     1021 tgatcgggcc gatcatggcc cgggtggcgc tgtgggcgat gaaccccaac gacccccgct
     1081 ggcgctcacc ccaccccacc gacgccatcg ccgccgcgag cattctcctg tccctgggtc
     1141 tgttcttcta tgcccgccgg actgaccggg atccgcggtt catcctcgat ctcggcctcg
     1201 gctacatgat cctggcggcg gccgccatcg gccttgtcat gcactgggag cccccgccgg
     1261 ccggtttccc gccggtcccg gttatcacat gggtgggggc cgttgtgctg atgttcgccg
     1321 cgatcgtgcc gagcacgccg ggtaagaccc tggtgg
//
LOCUS       DATIFF010000626         1034 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_80391, whole genome shotgun sequence.
ACCESSION   DATIFF010000626 DATIFF010000000
VERSION     DATIFF010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80391"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1034
                     /locus_tag="VLD58_09320"
     CDS             <1..>1034
                     /locus_tag="VLD58_09320"
                     /inference="COORDINATES: protein motif:HMM:NF013755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HSB54544.1"
                     /translation="PAQFPAIVARLRAAPLVALDTETSSLEPHDAELIGLSFAASPDE
                     VWYLPFGHRPPAGELAAPAPVTSLPPLTDPACAPIAELLRDPGIPKAGHNIKYDWQVL
                     RRAGVELQGVSYDSMLASFVLDPGRRSHAIDTLSLEHLGRGMRQYTDLTGKGKSQIPF
                     AEVPVADAAQYCGADSATVLALHEFFAPSLRDMGLEDLLHKIEMPLVPVLVDMEWDGI
                     AINRAIFTRLADELTRDMAQLEVKIAEVAGVSINLNSPKQLATVLFEKLQLPVLKKTK
                     TGPSTDADVLDQLAAMGHEIPALILEYREVQKLKSTYVDVLPGRINQATGRIHTSFNQ
                     TGAATGRLSSS"
BASE COUNT          171 a          381 c          327 g          155 t
ORIGIN      
        1 cccgcccagt tcccggccat cgtcgcgagg ctgcgcgcgg cgccgctggt cgccctcgac
       61 accgagacct catcgctgga gccgcatgac gccgagctca tcggcctctc gttcgccgcc
      121 tcgccggacg aggtgtggta cttgccgttc ggtcaccggc cgcccgcggg agaactcgcc
      181 gcccccgcac cggtcacgtc gctgccgccg ctcaccgatc ccgcctgcgc cccgatcgcg
      241 gagctgctcc gcgaccccgg catccccaag gcgggacaca acatcaagta cgactggcag
      301 gtgctccgcc gagccggtgt cgaactgcag ggcgtgtcct acgactcgat gctggcgagc
      361 ttcgtcctcg atcccggccg ccgctcccat gccatcgata ccttgagcct cgagcacctc
      421 ggccgcggga tgcggcagta caccgacctg accggaaagg ggaagtcgca gattcccttc
      481 gccgaggtcc cggtggccga cgcggcgcag tactgcgggg cggacagcgc cacggtgctg
      541 gcgctccatg agttcttcgc gccgtcgctc agggacatgg gcctcgaaga cctgctccac
      601 aagatcgaga tgccgctggt cccggtgctg gtggacatgg agtgggatgg gatcgccatc
      661 aaccgggcga tcttcacccg cctcgccgac gaactcaccc gggacatggc ccagctggag
      721 gtgaagatcg ccgaggtggc cggtgtctcg atcaacctca actcaccgaa gcagctcgcc
      781 acggtgctgt tcgagaagct gcagctgccg gtgctcaaga agaccaagac cggcccctct
      841 accgacgcgg acgtcctcga ccagctcgcc gccatggggc acgagatccc ggcgctcatc
      901 ctggagtacc gggaggtgca gaagctcaag tcgacctatg tcgacgtgct gcccgggcgg
      961 atcaaccagg ccaccggccg gatccacacc agcttcaatc agaccggcgc agccacgggg
     1021 cggctcagct cgtc
//
LOCUS       DATIFF010000627         1655 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1003551, whole genome shotgun sequence.
ACCESSION   DATIFF010000627 DATIFF010000000
VERSION     DATIFF010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1655
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1003551"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..443
                     /locus_tag="VLD58_09325"
     CDS             <1..443
                     /locus_tag="VLD58_09325"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HSB54545.1"
                     /translation="SGPDSPPHTKAAVLGILRAADVFRRRAAALLEPYGITQQQYNVL
                     RILRGAQPDGLCTLTIVDRMLERTPGITRLIDRLEAKRLAVRVRSAEDRRQVWCRITP
                     DGLRLLARLDRPVAELDRSLVAGLSRTDQERLGELLAVVHREPA"
     gene            510..956
                     /locus_tag="VLD58_09330"
     CDS             510..956
                     /locus_tag="VLD58_09330"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HSB54546.1"
                     /translation="MLTTLLHTQADWAGLILRLVLALVIFPHGAQKVLGWFGGYGYAG
                     TMQYFTKQVGLPAPVALTVLAAEFLGPIALVAGFATRPAVLLIAAVMIGAILKVHRGV
                     GFFMNWGGQHQGGKEGFEYHLLVLAICAALLVTGAGTFSIDGLLAR"
     gene            complement(992..>1655)
                     /locus_tag="VLD58_09335"
     CDS             complement(992..>1655)
                     /locus_tag="VLD58_09335"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HSB54547.1"
                     /translation="PRSIIASALICMGLYVLVTLSYTYVLGPDRVAASQLVASDAARA
                     TLGSIGAGFVVVGILVSTLGANNGIVLTAARIPYAMARDGLLFRFLGAVHPRWLTPAI
                     SLLVQAAISIALTLTGQYDRLYTYVVFAQFLFYALMCGAVIRLRRRRPDLARPYRAWG
                     YPATPALFIGFAVWLVINTIREDPLDSAVGAGLILLGLPLYFYFKGRLSAIDHRSTGT
                     IA"
BASE COUNT          276 a          554 c          567 g          258 t
ORIGIN      
        1 tgagcggacc cgattcccca ccccacacca aggccgccgt gctcggtatc ctgcgcgccg
       61 ccgatgtgtt ccgccgccgc gccgccgccc tgctcgagcc ctacggcatc acgcagcagc
      121 agtacaacgt gctgcgcatc ctgcggggcg cgcagccgga cggcctgtgc accctgacca
      181 tcgtcgaccg catgctcgag cggactccgg ggatcacccg gctcatcgac cggctggagg
      241 ccaagcggct ggcggtgcgg gtccgctcgg ccgaggaccg gcgccaggtg tggtgccgca
      301 tcacgccgga cggtctccgc ctgctggcgc gcctcgatcg gcccgtggcc gagctggacc
      361 gcagcctcgt ggcggggctg tcgcgcaccg accaggagcg gttgggcgag ctcctggccg
      421 tggtgcatcg ggaaccggcg tgacggtgtt tttgttgggc taatagttga ctggttaaat
      481 aatcacctgt cattcacagg agctggacaa tgttgacgac gctgctgcac acccaggccg
      541 actgggccgg gctgatcctc cgcctggtgc tggccctggt catcttcccc cacggggccc
      601 agaaggtcct tggctggttc ggaggctacg ggtacgcagg caccatgcag tacttcacca
      661 agcaggtcgg actgcccgcc cccgtggccc tgaccgtcct ggccgcggag ttcctgggac
      721 cgatcgcgtt ggtggccggc ttcgccaccc gccccgcggt gctgctgatc gccgcggtca
      781 tgatcggtgc gatcctcaag gttcaccgag gggtcgggtt cttcatgaac tggggcggac
      841 agcaccaagg aggtaaggaa ggattcgagt accacctcct cgtgctcgcc atctgtgccg
      901 cgctgctcgt gacgggtgcc gggacgttct cgatcgacgg gctgttggcg cgctgacggg
      961 cggccatcag cgatcggcta tcggctatcg gtcaggcgat tgtgcccgtt gaccgatggt
     1021 cgatagccga tagccggccc ttgaagtaga agtacagcgg caaccccagc agaatcagcc
     1081 ccgccccgac ggccgagtcc agcgggtcct cgcggatcgt gttgatgacc agccagaccg
     1141 caaaaccgat gaacagcgcc ggcgtcgccg ggtagcccca cgcccggtag ggacgcgcca
     1201 gatcgggacg tcggcgccgc agccggatca cggccccgca catcagcgcg tagaagagga
     1261 actgggcgaa tacgacgtag gtatagagcc ggtcgtactg accggtgagc gtgagcgcga
     1321 tgctgatcgc ggcctggacc agcagcgaaa tcgccggcgt gagccagcga gggtgcacgg
     1381 ccccgaggaa ccggaacagc agcccatccc gggccatggc atagggaatc cgggcggccg
     1441 tcagtacgat cccgttgttg gcgcccaacg tcgacaccag gatccccacg acgacgaacc
     1501 ctgccccgat gcttcccagc gtcgcgcgcg ccgcgtcgct cgccaccagt tgtgaggcgg
     1561 ccacgcggtc gggaccgagc acataggtgt acgacagggt gacgaggacg tagagtccca
     1621 tgcagatgag cgcggaggcg atgatcgagc gaggc
//
LOCUS       DATIFF010000628         1031 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_695194, whole genome shotgun sequence.
ACCESSION   DATIFF010000628 DATIFF010000000
VERSION     DATIFF010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_695194"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..256)
                     /locus_tag="VLD58_09340"
     CDS             complement(<1..256)
                     /locus_tag="VLD58_09340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54548.1"
                     /translation="MRAVAGLMLVTVTAAPLAGQRLSRMPVEAANLVVQVLAGGGDDE
                     EVGAGIVVAASNRIIVATAAHVVRAARQDGAVRVVFQFARN"
     gene            complement(253..>1031)
                     /locus_tag="VLD58_09345"
     CDS             complement(253..>1031)
                     /locus_tag="VLD58_09345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54549.1"
                     /translation="LVLGSLGISGLEEVSLPAQVPNPARSVATPTLFLKAVHPDSGGI
                     SIDPIRLPAGTLIAVRTTGSAGLVQLTIGDSLPLIPVSVSGPIVVSLPDQPADTIPFR
                     IDQIQLTAPRGPLDFELGFEGSAVARPLVPLEVIGVSFQDVNRFRDEEQASDQAVSTI
                     DSGSFGLGVGNRAAHTLTKGEDLPLHGFRGAIRDVAVDSQAVALTLDGTVDSLPASLG
                     SVPSKLQVLWSAHPVASGGAGLVYLALFVLVGLYWKRGTR"
BASE COUNT          171 a          360 c          366 g          134 t
ORIGIN      
        1 cgttgcgagc gaactggaac accaccctga ccgctccgtc ctgccgggcc gcgcgcacca
       61 cgtgggctgc ggtcgcgacg atgatgcgat tggacgccgc gaccacgatc ccggccccga
      121 cctcttcgtc atcccccccg ccggccagca cctggaccac caggttggcc gcctccaccg
      181 gcatgcgtga cagccgctgg cccgccagcg gggcggccgt gacagtgacc agcatcagac
      241 cggcgaccgc tctcatcgtg tgcccctctt ccagtagagc ccgaccagaa cgaacagcgc
      301 gaggtagacg aggccggcgc cacccgaggc cacgggatgc gccgaccaga ggacttgcag
      361 cttgctcggg accgagccga gcgaggcggg cagggaatcg acggtgccat cgagggtgag
      421 ggccacggcc tgggagtcga ccgcgacgtc ccggatcgcg ccgcggaagc cgtgcagggg
      481 caggtcctca cccttcgtca gggtatgggc ggcccggttg ccgacgccga gtccgaagct
      541 gccgctgtcg atggtcgaca ccgcctgatc gctggcctgc tcctcgtcgc ggaaccgatt
      601 gacgtcctgg aagctcacgc cgatgacctc gagcggcacc agggggcgcg cgacggccga
      661 gccctcgaat cccagctcga aatcgagcgg cccgcgggga gccgtgagct ggatctgatc
      721 gatgcggaac ggaatcgtgt ccgccggctg gtccggcagg ctcacgacga tcggcccgct
      781 caccgagacc gggatgagcg ggagcgagtc tccgatggtc agctgcacca agccggcgga
      841 cccggtagtc cgcacggcga tcagggtgcc cgccgggagg cgaatcgggt cgatgctgat
      901 cccgccggaa tccgggtgga ccgccttgag gaacagggtc ggcgtcgcga cgctgcgcgc
      961 ggggttcggc acctgagcgg gaagcgagac ctcttccagt cctgagatcc cgagggatcc
     1021 caggaccagg g
//
LOCUS       DATIFF010000629         1030 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1771764, whole genome shotgun sequence.
ACCESSION   DATIFF010000629 DATIFF010000000
VERSION     DATIFF010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1030
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1771764"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..396)
                     /locus_tag="VLD58_09350"
     CDS             complement(<1..396)
                     /locus_tag="VLD58_09350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54550.1"
                     /translation="MVGIGRLLPKNYLFTILGIAVGVAGLVALGAMAERITRFIDGGD
                     RFVLGQISVAGEGMGMGTGFTAGGLLRASRIEQIARVPGVAAVQAQVMLPLNPTTSQF
                     LTLTQELILGVDPATPMPNRQFRELPVRSG"
     gene            complement(390..>1030)
                     /locus_tag="VLD58_09355"
     CDS             complement(390..>1030)
                     /locus_tag="VLD58_09355"
                     /inference="COORDINATES: protein motif:HMM:NF016693.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tryptophan 7-halogenase"
                     /protein_id="HSB54551.1"
                     /translation="GWFWYIPFHNGTSSVGCVLHARTVRGREGNLEQLYESLIAQCRG
                     LVEALDGAPRITPVHRAANFSYQTEPAVGDRFVCVGDAIAFLDPIFSSGVYLATQSAE
                     LSAGEILQAFRENRFEARRFRAYQRAIRRGMQPFQRFIRNFYDPSFTEMFLKPREFAG
                     MVDGVTGVLAGGAFLRMTLRMRLSLEVFFTIVRINRWVRRRRGLATESRFKW"
BASE COUNT          169 a          351 c          375 g          135 t
ORIGIN      
        1 gccgctccgg accggcagct cccggaactg gcggttcggc atcggggtcg ccgggtccac
       61 gcccaggatc agctcctggg tgagggtcag gaactgcgag gtggtgggat tgagcggcag
      121 catcacctgc gcctgcaccg cggccacccc cggcacccgc gcgatctgct cgatccggct
      181 ggcccggagg aggccgcccg cggtgaagcc ggtgcccatg cccatcccct cgccggccac
      241 cgagatctgg ccgagcacga agcgatcgcc gccgtcgatg aagcgggtga ttcgctcggc
      301 catcgcgccc agcgcgacca gtccggccac gcccaccgcg atgcccagga tcgtgaacag
      361 gtagttcttg ggcaggaggc ggccgatccc taccatttga agcgggattc ggtggcgaga
      421 ccgcggcggc ggcgcaccca gcgattgatc cggacgatcg tgaagaagac ctcgagcgag
      481 agccgcatcc gcagcgtcat ccgcaggaag gcgcctccgg ccagcacccc ggtgaccccg
      541 tccaccatgc ccgcgaactc gcgcggcttg aggaacatct cggtgaacga ggggtcgtag
      601 aagttgcgga tgaagcgctg gaagggctgc atgccccgac ggatggcgcg ctggtaggcg
      661 cggaagcgcc gcgcctcgaa gcggttctcg cggaacgcct gcaggatctc gcccgcggag
      721 agctcggcgg actgggtggc gaggtagacg ccggaggaga agatcgggtc caggaaggcg
      781 atcgcgtcgc ccacgcagac gaaccggtcg cccaccgcgg gctcggtctg gtaggagaag
      841 ttggccgcgc ggtgcaccgg ggtgatccgc ggcgcgccgt cgagggcctc caccaggccg
      901 cggcactgcg cgatcagcga ctcgtagagc tgctccaggt tgccctcgcg tccgcgcacc
      961 gtgcgcgcgt ggagcacgca gcccacgctg ctggtgccgt tgtggaacgg gatgtaccag
     1021 aaccagcccg
//
LOCUS       DATIFF010000630         2422 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_387288, whole genome shotgun sequence.
ACCESSION   DATIFF010000630 DATIFF010000000
VERSION     DATIFF010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2422
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_387288"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            302..1285
                     /locus_tag="VLD58_09360"
     CDS             302..1285
                     /locus_tag="VLD58_09360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54552.1"
                     /translation="MSVTGEPEIDPERGGPECDRSDDRRRRTVRVLLDQLRRRRGLIT
                     GLRGENATLRRQVADLQATLAALGRGLGEPSDPVRAKPVTEPDRATIDWPEEGRRLES
                     TIRALRERMAVMEEAVRAGERELVEREEDAARLRADLDWAETRLVEIEQERRAEGESR
                     QRLRDARALADWGCRLVSQLTVRLMAAERAPAKLVSAGSRARGLLFVDAPPLTEAPVV
                     AAPLTVGGWAASTGRVSAVKIRCDGRVVGTTGTGLSRPDVAAAYPDLRDAASAGFSWT
                     WDLAGVAPGPHVLAVSVADDQGWATDVAGVIVVAPHGEARGPVRGPRRAAT"
     gene            1488..>2422
                     /locus_tag="VLD58_09365"
     CDS             1488..>2422
                     /locus_tag="VLD58_09365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54553.1"
                     /translation="MNALLFLLLVATLFQYPYYPTFSLDSSWSMALGHFFREGLQFGP
                     EVTFTFGPLGFLFGPTYMGLHFWSLMLWQALSTAVFAFVVIASARPLTGVRRVLYFGF
                     FLLLGTAYYPDALYLMIVVLIGFEVIRRTREGRPLFACLLVALLALFAIMKFTLLMLA
                     SFSLLVAGLRALVRGHRPQAPLLPSCFVIVYLALWAASGQQLSNLPVYLHNSWQLSQG
                     YQYAMGLPTPMQPFWPAVTALFALSAYALLHLILNLGRPCTVSRFSLLAAFIFLIWKQ
                     GIVRSDGHMRLFFVAALLPAVAFPALVDDPSRRRWA"
BASE COUNT          316 a          840 c          837 g          429 t
ORIGIN      
        1 atgccggcca atgtgtcatt gctcgttcgc ctgttcgtgg agccgcaccg gccgccggcc
       61 ccaggccggt ccaccgagcc gaccgcaggc agcatagaat acgtggaagc ggccggcggc
      121 cgcaacgcga gaccgaccgg gacgcggcca ggggttggtc ggtcggggcc gcctgcggcg
      181 gtgcgcgacg tatactggcc agacgctcgg ccactcgatg ggcgacatca tccgagtcgc
      241 cccggggtgc ccgcgcgtgg ccgggcgaca gcgggatccg atcgatatcc aggagggagc
      301 ggtgtcggta acgggcgagc cggagatcga cccggagcgc ggaggtccgg agtgcgatcg
      361 gagtgacgat cgccgccgcc ggaccgtgcg agtgctgctg gaccagctcc ggcggcgacg
      421 agggttgatt accggcctgc gaggcgagaa cgccaccctc cggcggcagg ttgccgacct
      481 ccaggcgacc ctggccgcgc tcggccgggg actgggggag ccgagcgatc cggttcgcgc
      541 gaagcccgtg accgagccgg accgagcgac catcgactgg ccggaggagg gccgacggct
      601 ggaatcgacg atccgcgcgc tccgcgagcg gatggccgtg atggaggaag cggtgcgggc
      661 cggcgagcgg gagctcgtgg aacgcgagga ggacgccgcc cggctgcggg ccgacctcga
      721 ctgggcagag acgcggctgg tcgagatcga gcaggaacgg cgagccgaag gggagtcgcg
      781 ccagcggctc cgcgatgccc gggcgctggc cgactggggc tgccgtctcg tcagtcagct
      841 caccgttcgc ctgatggcgg ccgagcgcgc acccgccaag ctcgtttccg cgggaagccg
      901 tgcccggggc ctgctgttcg tcgatgcccc cccgttgaca gaggcacccg tggtggcggc
      961 gccgttgacg gtcgggggct gggcggcgtc gacgggccgg gtgtcggcgg tgaagatccg
     1021 ctgcgacggg cgcgtcgtcg ggacgaccgg gaccgggctt tcccggccgg acgtcgcagc
     1081 ggcctatccc gacctgcgcg atgcggcatc ggccggattc agctggacct gggacctggc
     1141 gggcgtggcg ccgggaccgc acgtcctggc ggtctccgtg gcggatgacc agggctgggc
     1201 gaccgatgtc gcgggcgtca tcgtggtggc gccgcacggc gaggcgaggg gcccagtgcg
     1261 cgggccgcgg cgggccgcaa cctgacggcg gccgcgcgcg cccccgccca gtgggttctg
     1321 acgcgatcgt gtggccgtcg aggcattagc cactcggggc gtcctcgggg attgagcggc
     1381 acccacggcg gccctccggc cctctcggta gcgtgggtcg ccgagcccat gcgcgccccg
     1441 gagggagccg caccctcgcc tccctggaat acgagatgcc tctccccatg aacgccctcc
     1501 tcttcctcct gctcgtggcc accctgtttc aatatcccta ctacccgacc ttctccctcg
     1561 actcgtcctg gagcatggct ctcggccatt tcttccgcga gggtctgcaa tttggcccag
     1621 aggtcacgtt cacatttggg cccctcggtt tcctgttcgg cccgacctac atgggcttgc
     1681 acttctggag cctcatgttg tggcaggcgc tcagtacggc ggtcttcgcc ttcgttgtca
     1741 tcgcgagtgc ccggcctctc acgggggttc gcagggttct ctacttcggg ttcttcctgc
     1801 tgcttggaac cgcctattat cccgatgccc tctacctcat gatcgtcgtc ctgattggat
     1861 ttgaagtgat ccgccggact cgtgaggggc gcccgctctt cgcgtgtctc ctggtggctc
     1921 ttctggcgct cttcgcgatc atgaagttca cgcttctgat gctggcgagc ttctccctac
     1981 tggtcgccgg cctgcgagcg ctggtcagag gccaccggcc ccaagcaccc ctcctgcctt
     2041 cctgttttgt gattgtgtat ctcgccctgt gggcggcgag cggccagcaa ctctccaatc
     2101 tacccgtcta cctgcacaac tcctggcagc tcagccaggg ataccaatac gccatggggc
     2161 tgcccacgcc catgcaacca ttctggccgg ccgttacggc cctgtttgct ctctcggcat
     2221 acgccctgct ccatctcatc ctgaatctcg gcaggccctg taccgtgtcg cgcttcagcc
     2281 tactggcggc cttcatcttc ctcatctgga aacagggcat cgtgcgctcc gacggccata
     2341 tgcgcctttt cttcgtcgcc gcgctccttc cggccgttgc ctttccggcc ctggtggacg
     2401 acccatcccg ccgacgttgg gc
//
LOCUS       DATIFF010000631         1429 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1003783, whole genome shotgun sequence.
ACCESSION   DATIFF010000631 DATIFF010000000
VERSION     DATIFF010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1429
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1003783"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1429)
                     /locus_tag="VLD58_09370"
     CDS             complement(<1..>1429)
                     /locus_tag="VLD58_09370"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB54554.1"
                     /translation="HPHILTLHDSGVADGFLFYVMPLIEGETLRARMTREKTLPVEDA
                     VRLTGEVADALAYAHDHGVIHRDIKPENILLQSGHAIVADFGIARAVHAAGSERITLT
                     GMSVGTPAYMSPEQSAGERDVDGRSDLYALASVLYEMLAGEPPFTGATVEAMLVQRFT
                     RTAPRVATKRPNVPRAIDAALATAMARAPEDRFSTVADFAAALESKAGAQGAEPGERS
                     IAVLPFANMSGDPENEYFSDGISEEIINALTQLPRLRVAARTSAFSFKGKNADLRVIG
                     DQLSVGTVLEGSVRRAGGRIRITAQLINVADGYHLWSERYDRELTDVFAIQDEIASAI
                     ADKLKLTLAAGAEGRLARPPTANVEAYDLYLKGHALIKQRGPALLRAVEALEQALAID
                     PALALAHAELAEALLLMSLYGMVRPAEIAERAREGTYRALELAPRLVLGQVVLGLHSI
                     MGEFDLNRGSAALARAVELDPLDLEA"
BASE COUNT          213 a          496 c          500 g          220 t
ORIGIN      
        1 gagcctcgag atcgagcgga tccagctcga ccgcccgggc aagcgcggcg gagccccgat
       61 tcaggtcgaa ctcacccatg atcgaatgga ggcccaggac cacctgaccc agaaccagcc
      121 ggggcgcgag ttcgagtgcg cggtaggtcc cctcccgggc ccgctcggca atctccgccg
      181 gccggaccat tccgtagaga ctcatcagca gcagcgcctc ggccagctcc gcgtgggcca
      241 gcgccaacgc ggggtcgatc gcgagtgcct gctccagcgc ttcgaccgcc cggagcagcg
      301 ccgggccccg ctgcttgatg agggcgtgcc ctttgaggta caggtcgtag gcctcgacgt
      361 tcgccgtggg aggacgcgcc aggcgaccct cggcgccggc ggcgagcgtc agcttcagct
      421 tgtcggcgat ggcggacgcg atttcgtcct ggatggcgaa cacatcggtc agctcgcggt
      481 cgtatcgctc ggaccagagg tgatagccat cggcgacgtt gatcagctgc gcggtgatcc
      541 ggatccgccc accggcccgg cgcacgctgc cctccagcac cgtgccgacg ctcaactggt
      601 caccgatgac ccgaaggtcg gcgttcttcc ccttgaagga gaaggccgaa gtgcgggccg
      661 cgacccggag gcgggggagc tgggtcaggg cgttgatgat ctcctcggag atgccgtcgg
      721 agaagtactc gttctccggg tcgccgctca tgttggcgaa ggggagcacc gcgatggacc
      781 gctcccccgg ctcggcaccc tgcgctccgg ccttcgactc cagcgcggcg gcgaaatccg
      841 ccaccgtgga aaaccggtct tccggcgccc gggccatggc ggtcgcgagg gccgcgtcga
      901 tggcccgggg cacgttgggt cgcttggtgg ccacccgggg cgcggtccgg gtgaagcgct
      961 gcaccagcat cgcctccaca gtggccccgg tgaagggcgg ctcacccgcc agcatctcgt
     1021 agagcacgct ggccagcgcg tacaggtcgc tccggccgtc cacgtcccgt tctccggccg
     1081 attgctccgg gctcatgtag gccggcgtcc ccacggacat gccggtcagg gtgatccgct
     1141 ccgatccggc cgcgtgcacc gcgcgggcga tcccgaagtc cgcgacgatg gcatgacccg
     1201 actggagcag gatgttctcc ggcttgatgt cgcgatgaat gacgccgtgg tcgtgcgcgt
     1261 aggccagcgc atcggccact tccccggtga gccgcaccgc gtcttccacg ggcagggtct
     1321 tctcccgcgt catccgggcg cgcagggtct cgccctcgat caggggcatg acgtagaaca
     1381 ggaatccatc ggccacgccc gagtcgtgca gggtgaggat gtgagggtg
//
LOCUS       DATIFF010000632         1244 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1926542, whole genome shotgun sequence.
ACCESSION   DATIFF010000632 DATIFF010000000
VERSION     DATIFF010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1926542"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..807
                     /locus_tag="VLD58_09375"
     CDS             <1..807
                     /locus_tag="VLD58_09375"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HSB54555.1"
                     /translation="IEGPIEGMEYPMITFDPRAPSREERQWVLAHELGHQWMPMIVGS
                     NERLYPWMDEGFNTFIDLANSAKYFAGTPYGDSIEVHPLHLYPDHAVPGTEQPLIGRP
                     VEQHDLFWTGYQKPALMMRTLREEVLGPERFDRAFRDYLRTWAFRHPTPADFFRLMRD
                     ASGMDLDWFWRDWIFTTARLDQAVDSIGGKEGEQKVWLSNRGTMTMPMELELRYADGG
                     SERVRLPVEMWNLGPRFAYRVKGDRRVVRAEADPRGVLPDVDRGNNRRER"
     gene            complement(808..>1244)
                     /locus_tag="VLD58_09380"
     CDS             complement(808..>1244)
                     /locus_tag="VLD58_09380"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSB54556.1"
                     /translation="GAGTEAAAVETRLAGQGLHVAEMMVREFHSIPIHATLSQAVELL
                     LAGEQREFPVVDNLGRTEGLLTRDNLVRGLSHRGPGSTVAEAMTPNVPSVSPTLPFQE
                     ALDRLRSSGLPALPVVDSDGRLVGLLTRDNIADLLLVRRAGA"
BASE COUNT          190 a          425 c          446 g          183 t
ORIGIN      
        1 atcgaggggc cgatcgaggg gatggaatac ccgatgatca ccttcgatcc gcgggcgccg
       61 agccgcgagg agcgccagtg ggtgctggcg cacgagctgg gacaccagtg gatgccgatg
      121 atcgtgggct cgaacgaacg gctctatccc tggatggacg agggcttcaa caccttcatc
      181 gacctggcca atagcgcgaa gtacttcgcc ggcacgccct acggcgactc gatcgaggtg
      241 cacccgctgc acctctatcc cgaccacgcc gtgccgggca ccgagcagcc cctcatcggc
      301 cgcccggtgg agcaacacga cctgttctgg accgggtacc agaagccggc gctcatgatg
      361 cggaccctgc gggaggaggt gctggggccc gagcgcttcg accgtgcctt ccgggattat
      421 ctccgcacct gggcgttccg gcaccccacc ccggcggact tcttccggct gatgcgtgac
      481 gcctcgggga tggatctcga ctggttctgg cgcgactgga ttttcaccac cgcccggctg
      541 gaccaggcgg tggactcgat cggcggcaag gaaggcgagc agaaggtctg gctctcgaac
      601 cgcggcacca tgacgatgcc gatggagctc gagctgcgct acgccgacgg cggatcggag
      661 cgggtgcgtc tcccggtcga gatgtggaat ctcggccccc ggttcgcgta ccgggtcaag
      721 ggcgaccggc gcgtggtccg ggcggaggcc gatcctcggg gcgtgctgcc cgatgtggat
      781 cggggcaaca accgccggga gcgctgatca ggcgccggcc cggcgcacca gcagcaggtc
      841 ggcgatgttg tcacgggtga gcaggcccac cagccgcccg tcgctgtcca ccaccggcag
      901 cgccggcagc ccgctggacc ggaggcggtc cagcgcctcc tggaagggca gcgtggggga
      961 gacgctcggt acgttcggtg tcatcgcctc ggccacggtg gagccggggc cgcggtggct
     1021 cagcccgcgc acgagattgt cgcgggtcag gaggccctcg gtgcgcccca gattgtccac
     1081 caccggaaac tcccgctgct cgcccgcgag gagcagctcg accgcctgcg acagggtggc
     1141 gtggatcggg atgctgtgga actcccggac catcatctcg gccacgtgca gcccctggcc
     1201 ggcgaggcgg gtttccaccg ccgccgcctc ggtcccggcg ccga
//
LOCUS       DATIFF010000633         1290 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_695458, whole genome shotgun sequence.
ACCESSION   DATIFF010000633 DATIFF010000000
VERSION     DATIFF010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_695458"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..445
                     /locus_tag="VLD58_09385"
     CDS             <1..445
                     /locus_tag="VLD58_09385"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="asparagine synthase-related protein"
                     /protein_id="HSB54557.1"
                     /translation="DFMTYLPEDILAKVDRASMLSSLEVRAPWLDHRIVEFAFRRVPD
                     HLKATATERKILLRLLGARVLPPSLDLRRKQGFSIPIETWFKGTWGDYIEAVLREADP
                     DLFDRRIIARLLRHQRGGYTTNGDRLFALAMLELWRREYRVQLVA"
     gene            495..>1290
                     /locus_tag="VLD58_09390"
     CDS             495..>1290
                     /locus_tag="VLD58_09390"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSB54558.1"
                     /translation="MSASPSLRIAIVTNRFAPHVGGIERQMALVGNGLVRRGHQVTVL
                     TRRYDPALARREVLNGVQVERFGPSGHGPVSKWLVNLATFRRLATSKPAFDCALVTQF
                     SATIMGPALTHAVGRGIPMVIRPAEPGEFTGDVSRRSLSRLPPGARGIARAALQKSRG
                     WAYDKVGVVVAIAELLAREAEDFGFPPASIVRIPNPLDTARFRPATPVERESLRAELG
                     IARGTKVVTFSGRLARGKGVLTLARAWKELAPMHPEALLVFVGSGPG"
BASE COUNT          194 a          438 c          454 g          204 t
ORIGIN      
        1 ggatttcatg acctacctgc cggaggacat cctggcgaag gtggatcgcg cgagcatgct
       61 ctcgtctctg gaggttcgtg caccttggct ggaccatcgc atcgtcgaat ttgccttccg
      121 gcgcgtgccc gatcacctca aggccacggc gaccgagcgg aagatcctcc tccgcctcct
      181 cggggcccgc gttctgccgc cgagcctcga cctgcggcga aagcagggct tctccatacc
      241 catcgagacc tggttcaagg gaacgtgggg cgactacatc gaggcggtcc tgagggaggc
      301 ggatcccgat ctgttcgatc ggcggatcat cgcccggctg ctgaggcacc agcggggcgg
      361 gtacacgacc aacggcgacc gcctcttcgc gctggcgatg ctcgagctgt ggcgcaggga
      421 ataccgcgtg cagctggtcg cctgagccgc gccggacggc cccaagatca gtgccacgcg
      481 caagggtata accattgagt gcaagcccga gcctgcgaat cgcgatcgtc accaaccgct
      541 tcgccccgca tgtcgggggc atcgagcggc agatggcgct ggtgggaaac ggactggtcc
      601 ggcgaggcca tcaggtcacc gtcctgaccc ggcgctacga cccggcgctg gcccggcgcg
      661 aggttctgaa cggggtgcag gtggagcggt ttggaccgtc cggccacgga ccggtctcca
      721 aatggctggt gaacctggcc acgttccgcc gcctggccac cagcaagccc gcgttcgatt
      781 gcgcgctggt gacccagttc tccgccacca tcatgggccc tgccctcacc cacgccgtcg
      841 gccgggggat tccgatggtc atccggccgg ccgagccggg cgagttcacc ggagacgtgt
      901 cacggcgaag cctgtcgcgc ctgccccccg gggcccgcgg catcgccagg gccgcgctgc
      961 agaagagccg tggatgggcc tacgacaagg tcggggtcgt cgtggcgatc gcggagctgc
     1021 tcgcccggga ggcggaggac ttcgggtttc cgccggcctc gatcgtccgc attcccaacc
     1081 ccctggacac ggcgcggttc cggccggcga cgccggtgga gcgtgagagc ctgcgggcgg
     1141 agttggggat cgcccgcggc accaaggtcg tcaccttcag cgggcgcctc gccagaggca
     1201 agggcgttct gacgctggcg agggcctgga aggagctagc gccgatgcat cccgaagcgc
     1261 tgctggtctt cgtcggctcg gggcccggtt
//
LOCUS       DATIFF010000634         1368 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1004007, whole genome shotgun sequence.
ACCESSION   DATIFF010000634 DATIFF010000000
VERSION     DATIFF010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1368
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1004007"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1164
                     /locus_tag="VLD58_09395"
     CDS             <1..1164
                     /locus_tag="VLD58_09395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54559.1"
                     /translation="LSGDAGFNPAHPTLGDNAGQTAANLFFNDFNTALQTLDAQIAGG
                     SYAGNPALLALAQSISARGARLRAGLASITSNPEASPFLPTATSAAGIALTDAIRALQ
                     DTLATTLSVSSSFTEGPVLAAARLGPGDVTSFLSNSAGPIAALPLTGATLSRMGDMDV
                     GAVYTLVDRFDRIGRRPGGFRFAVEGKLKLPTGLRDDPNNLLHVGTGNGRYELGVRGI
                     ADLGGGAWGARFTGGYTRKFKALRVRRVAGPGEAFPEAGTLTNVNYKAGDVLQLGAQP
                     FFRIARNFALASSADYWREAAGSATYYRASDAIPGLPASVLVANSARRALMVGGGVSY
                     VGRAVQECEQGRRCGFPIDATWRYSRVVTGSGGRVPEFWSTQIEIRWYQRLWR"
     gene            1169..>1368
                     /locus_tag="VLD58_09400"
     CDS             1169..>1368
                     /locus_tag="VLD58_09400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54560.1"
                     /translation="MTASPPPRVSRATIAELRSVAITGLFVLAVFYTLHLGKEFFLPI
                     ALAIFLAMLLRPVVQWLRRLHIP"
BASE COUNT          200 a          511 c          443 g          214 t
ORIGIN      
        1 ctgagcggcg atgccgggtt caatcccgcc catcccacgc tgggggacaa cgccggccag
       61 accgcggcca acctgttctt caacgacttc aacactgcgc tgcagacgct cgacgcgcag
      121 attgcgggcg gcagctacgc cggcaacccc gcgctcctcg ccctggccca gtccatctcc
      181 gcgcgggggg cccggctgcg ggccggcctg gccagcatca cgagcaaccc ggaagcctca
      241 cccttcctgc caacggccac cagcgcggca gggatcgcgc tcacggacgc aatccgcgcc
      301 ctccaggata cgctggccac gaccctcagt gtgagcagca gcttcaccga aggcccggtg
      361 ctggccgcgg cgcgcctcgg ccccggcgat gtgacctcgt tcctctccaa ttccgccggt
      421 ccgatcgcgg cgctccccct caccggggcg acgctctcgc ggatgggaga catggatgtc
      481 ggcgcggtgt ataccctcgt cgaccggttc gaccggatcg gcaggcgtcc gggcggattc
      541 cgctttgccg tcgagggcaa gctcaagctg ccgaccgggc tgcgcgacga tcccaacaat
      601 ctgctgcacg tgggtaccgg caacgggcgc tacgaactcg gggtgcgggg catcgccgac
      661 ctgggcgggg gcgcctgggg cgcccggttc accggcggct acacccgcaa gttcaaggcg
      721 ctccgggtgc ggcgtgtcgc cgggccgggc gaggccttcc cggaggccgg caccctcacc
      781 aacgtgaact acaaggcggg cgacgtgctc cagctcgggg cccagccctt cttccggatt
      841 gcccgcaact tcgccctggc cagctcggca gactactggc gcgaagcggc cggaagtgcc
      901 acatactacc gagcgtccga tgcgatcccc ggcctacccg ccagcgtact ggtcgcaaac
      961 tcggcgcggc gtgccctcat ggtaggaggc ggcgtgagtt acgtcggacg ggcggtgcag
     1021 gaatgcgaac agggccgtcg ttgcggcttc ccgatcgacg ccacgtggcg ctacagccgt
     1081 gtcgtcaccg gtagcggcgg gcgggtgccc gaattctgga gcacccagat cgagatccgc
     1141 tggtaccagc gcctctggcg ctgacggcat gaccgcttcg cccccacccc gcgtctcccg
     1201 tgccacgatc gccgaactcc ggtcggtcgc gattaccggc ctgttcgtgc tcgcggtctt
     1261 ctacactctc cacctgggga aggaattctt cctccccatt gcgctcgcca tcttcctggc
     1321 gatgctgctc cggccagtgg tacagtggct ccgccggctc cacatccc
//
LOCUS       DATIFF010000635         1531 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1618108, whole genome shotgun sequence.
ACCESSION   DATIFF010000635 DATIFF010000000
VERSION     DATIFF010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1531
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1618108"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..354
                     /locus_tag="VLD58_09405"
     CDS             <1..354
                     /locus_tag="VLD58_09405"
                     /inference="COORDINATES: protein motif:HMM:NF013155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54561.1"
                     /translation="GTRLYQDPGLQAYVRDRRILLEINVSSNVHTHAVARAEDHPVRR
                     YFDAGLAVTLCTDGWLMSGVSLSDEYWGAHTALGFTREEIDQMILTGFEGAFLPWPER
                     RALLERARAELEAIR"
     gene            351..>1531
                     /locus_tag="VLD58_09410"
     CDS             351..>1531
                     /locus_tag="VLD58_09410"
                     /inference="COORDINATES: protein motif:HMM:NF019285.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside transporter C-terminal
                     domain-containing protein"
                     /protein_id="HSB54562.1"
                     /translation="MTGRRAALAVVLLALAVAGAWLVPGFAGRGVGALVAQQGAAPPD
                     TVVPPPGAAPASVPVAAPVSLGERLTGLIGLAAILGIGVAFSRDRRRIRWRVVAWGLG
                     LQFAFAVFVLRVPAGQALFRRLGELVTTLLHYSYAGSSFVFGELGKPDSSLGVIFAFQ
                     ILPAIIFVSALFAIMYYLGIMQAIVRAFAVVMSRVMGASGAESLNVAASIFMGQTEAP
                     LTIRPFLPRMTRSELMTVMTSGMAHISGSIMAAYIAFGVEARHLLTAVIMTAPGTILM
                     AKLFEPETETPETYGNVRLAIPKTDVNVVDAAARGTSEGLHLMLNVIAMLVSFIALVA
                     LVNGGFAALHGWLPWFPGDLQTVLGWIFRPVAWIMGVPWHDSGTIGALLGTRMVLNEF
                     IA"
BASE COUNT          186 a          542 c          545 g          258 t
ORIGIN      
        1 gggacccggc tgtaccagga cccggggctc caggcctacg tgcgcgaccg gcggatcctg
       61 ctggagatca acgtcagcag caacgtgcac acccacgccg tggcccgggc cgaggatcac
      121 ccggtgcggc gatacttcga cgccggcctc gcggtcactc tctgcaccga cgggtggctc
      181 atgtccggcg tctcgctcag cgacgagtac tggggggcgc acaccgcgct cgggttcacc
      241 cgcgaggaga tcgaccagat gatcctcacc ggattcgaag gggcgtttct cccgtggccc
      301 gagcgacggg ccctgctcga gcgggcgcgg gccgagctcg aggcgatccg gtgaccggcc
      361 ggcgcgcggc gctcgccgtc gtcctgctgg ccctggccgt cgccggggcg tggctggtgc
      421 ccgggttcgc gggccgcgga gtgggggcgc tggtcgccca gcagggcgcg gccccacccg
      481 acaccgtggt gccgcccccc ggggccgccc cggcctccgt ccccgtggcg gcgccggtgt
      541 cgctcgggga gcgcctcacc ggactgatcg ggctggcggc catcctcggg atcggggtcg
      601 ccttctcccg cgatcgccgg cggatccgct ggcgggtggt ggcctggggc ctggggctgc
      661 aattcgcctt cgcggtgttc gtgctccggg tccccgcggg acaggcgctc ttccggcggc
      721 tgggggagct ggtcaccacc ctgctgcact actcctatgc cggctcctcg ttcgtcttcg
      781 gcgagctggg caagcctgac tccagcctcg gcgtcatctt cgcgttccag atccttccgg
      841 ccatcatctt cgtgtccgcg ctgttcgcga tcatgtacta cctcggcatc atgcaggcga
      901 tcgtgcgcgc gttcgcggtg gtgatgagcc gggtgatggg cgcgagcggc gccgagagcc
      961 tcaacgtcgc cgcctcgatc ttcatggggc agaccgaggc gccgctcacc atccggccgt
     1021 tcctcccccg gatgacccgc tcggagctga tgacggtgat gacttccggc atggcccaca
     1081 tctccggctc gatcatggcg gcgtacatcg ccttcggggt cgaggcgcgg cacctgctga
     1141 ccgccgtcat catgactgcg cccgggacca tcctgatggc caagctgttc gagcccgaga
     1201 ccgagacgcc ggagacctac ggcaacgtcc ggctggcgat ccccaagacc gacgtgaacg
     1261 tggtggacgc ggcggcgcga ggcaccagcg aggggctgca cctcatgctc aacgtcatcg
     1321 cgatgctggt atccttcatc gcgctggtgg ccctggtgaa cggtgggttc gcggcgctgc
     1381 acggctggct gccctggttc cccggcgacc tgcagacggt cctggggtgg atcttccggc
     1441 cggtggcgtg gatcatgggc gttccctggc acgacagcgg gaccatcggc gccctgctgg
     1501 ggacccgcat ggtgctcaac gagttcatcg c
//
LOCUS       DATIFF010000636         1325 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1158508, whole genome shotgun sequence.
ACCESSION   DATIFF010000636 DATIFF010000000
VERSION     DATIFF010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1325
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1158508"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1325)
                     /locus_tag="VLD58_09415"
     CDS             complement(<1..>1325)
                     /locus_tag="VLD58_09415"
                     /inference="COORDINATES: protein motif:HMM:NF025092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HSB54563.1"
                     /translation="LLAPALRAQESGRIVGKVVDQEHGTAIAGAVLEVEGTEIRAQSA
                     IDGRYTLTRVPAGPVRLRARFIGYQPKVIEGIVVPAGGVVEQNLALQVQAIELEEITV
                     AAAEEQGSVNRALEEQRNATNVISSISSEQISKSPDSDAGQAVQRVSGVTVQDGKYVF
                     VRGLGERYTTTALNGARLPSPEPERKVVPLDLFPAGLLEGISTSKTFTPEQSGDFSGA
                     AVNITTREFPARRAFTFSTSVGYNTAATGRDLPKAPTDGSEWLGFAGSARKIPAGLKA
                     AGNLSGLNQSQVNQLIGSFRDVWRANSGNGSPNGSFGVSLGGEDPLFGQRVGYLASLT
                     YSYGQEVRAQDYRALAITGGPINQFSGRSGRSSVLWGGLLNLSTRIGSSSKISLNNTY
                     TRSADNEATRRVGTLEQFQSQGPLLATRLTFVARSVFSSQLRGEHLLGQR"
BASE COUNT          193 a          475 c          438 g          219 t
ORIGIN      
        1 cgctgcccca gcaggtgctc gccccggagc tggcttgaga acaccgagcg ggccacgaag
       61 gtgagccggg tcgcgagcag cggcccctgc gactggaact gctccagcgt ccccacccgc
      121 cgggtggctt cgttgtcggc gcttcgggtg tacgtgttgt tgagcgagat cttgctggag
      181 gaaccgattc gggtgctcag gttgaggagc ccgccccaga gcaccgaact ccgccccgag
      241 cgcccagaga actggttgat cgggcccccc gtgatcgcca gcgcccggta gtcctgcgcc
      301 cgcacttcct ggccgtacga gtacgtgagc gaggcgagat acccgacccg ctgtccgaac
      361 aacggatcct cgcctcccag cgacacgccg aacgatccgt tggggctgcc gttccccgag
      421 ttcgcccgcc atacatcgcg gaacgagccg atcagctggt tgacctgcga ctgattgaga
      481 ccgctcaggt ttcccgccgc cttgagcccg gccggaatct tccgggccga gccggcgaag
      541 ccgagccact cggagccatc ggtcggcgcc ttgggaagat cccgcccggt cgcggccgtg
      601 ttgtacccca ccgatgtaga gaaggtgaag gcccggcgcg ccggaaactc gcgggtagtg
      661 atgttgaccg cggcgccgct gaaatcgccc gactgttcgg gggtgaaggt cttcgaggtg
      721 ctgatgccct cgagcagccc ggccgggaag aggtcgagtg gcaccacctt ccgttccggc
      781 tcgggactcg gcagccgggc gccgttgagt gcggtggtgg tgtagcgctc gcccagcccg
      841 cgcacgaaga cgtacttgcc gtcctgcacc gtcacgccgc tcacccgctg caccgcctgg
      901 cctgcgtcgc tgtccggact cttggagatc tgctccgagg agatcgagct gatgacgttg
      961 gtggcgttcc gctgctcctc cagcgcccgg ttcaccgagc cctgctcctc ggccgcagca
     1021 acggtgatct cctccagctc gattgcctgg acctggagcg ccaggttctg ttcgaccacg
     1081 ccgcccgccg gtacgacgat cccttcgatc accttgggct ggtagccgat gaaccgggcc
     1141 cggagccgca ccggtcccgc cggcaccctg gtcagcgtgt agcgcccgtc gatcgccgac
     1201 tgagcccgga tctcggtgcc ctcgacctcg agcaccgcgc cggcgatcgc cgtcccgtgc
     1261 tcctggtcga ccaccttgcc gacgatccgg ccggactcct gcgcccggag ggccggggca
     1321 agaag
//
LOCUS       DATIFF010000637         3421 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1926847, whole genome shotgun sequence.
ACCESSION   DATIFF010000637 DATIFF010000000
VERSION     DATIFF010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3421
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1926847"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..576)
                     /locus_tag="VLD58_09420"
     CDS             complement(<1..576)
                     /locus_tag="VLD58_09420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018003270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HSB54564.1"
                     /translation="MARETSLDRYRNIGIMAHIDAGKTTTTERILYYTGKNYKIGEVH
                     EGAATMDWMEQEQERGITITSAATTCFWNRHDVLYRINIIDTPGHVDFTVEVERSLRV
                     LDGAVTLLDSVAGVEPQTETVWRQADRYGVPRMIFANKMDRVGANFERCVTMIRDRLS
                     KRSYPLQLPVGTGETFTGHIDVITRRQYIFDD"
     gene            complement(873..1343)
                     /gene="rpsG"
                     /locus_tag="VLD58_09425"
     CDS             complement(873..1343)
                     /gene="rpsG"
                     /locus_tag="VLD58_09425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007406077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HSB54565.1"
                     /translation="MSRRSKSVKRPVPADPRYDSQTVSKFVNNLMYQGKKSQSEGIFY
                     KAMDLIEERTGQPGVAVFKQAVNNAKPALEVKSRRVGGASLQVPVEVRPDRRTALAMR
                     WLIQFSRARTEKTMAERLAAELILASKGEGNTIKKKEDTHRMAEANRAFAHYRW"
     gene            complement(1340..1738)
                     /gene="rpsL"
                     /locus_tag="VLD58_09430"
     CDS             complement(1340..1738)
                     /gene="rpsL"
                     /locus_tag="VLD58_09430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005306278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HSB54566.1"
                     /translation="MPTISQLIRQGRSDVEAKDKAPALKGNPQKRGVCTRVYTTTPKK
                     PNSALRKVARVRLTNGFEVTAYIPGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGTL
                     DAAGVNDRRQGRSKYGAKRPKAAGAKGGAK"
     gene            complement(1813..2202)
                     /gene="acpS"
                     /locus_tag="VLD58_09435"
     CDS             complement(1813..2202)
                     /gene="acpS"
                     /locus_tag="VLD58_09435"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HSB54567.1"
                     /translation="MNVIGHGIDLVEIDRIRSALERHGDRFANRLFTEGEQTQAGTGP
                     LRVQFFAGRFAAKEAVMKALGTGWARGVSWTDIEVRRLPSGKPELLLKGKCKEIADGL
                     GVGQWEISITHTAGHAAASVVAVAALT"
     gene            2249..3175
                     /locus_tag="VLD58_09440"
     CDS             2249..3175
                     /locus_tag="VLD58_09440"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB54568.1"
                     /translation="MPSPPLLVRGLRKTYGDVLAVDGLDLEVRAGECFGLLGPNGAGK
                     TSTIEICEGLSPPDAGDVVVLGRRWGEQDRELRERLGISLQETQFSDKLTVGETVSLF
                     RSFYRRGPGPDAVIDMVQLGEKAGARVGRLSGGQKQRLALACALVGDPELLFLDEPTT
                     GLDPQARRQLWELIERLRSEGRSILLTTHYMDEAERLCDRVAIVDHGRVIAEGTPRAL
                     IASLGAEHVLEFAVGEGTVDDGMFGALEGVRGADRRDGVYRLQVTELHRAMPALLHAL
                     RDRGAHLTELRTHSPTLEDVFVSLTGRYLRDE"
     gene            3168..>3421
                     /locus_tag="VLD58_09445"
     CDS             3168..>3421
                     /locus_tag="VLD58_09445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54569.1"
                     /translation="MSDGARPKWTARSLVQLTLVRYREFMREPEAVFWVFLFPILLAA
                     GLGVAFRSRPADRTAVAVAGADSSAQAVAEALGRSPDLGVL"
BASE COUNT          479 a         1181 c         1184 g          577 t
ORIGIN      
        1 gtcgtcgaag atgtactgcc ggcgcgtgat cacatcgatg tgaccggtga acgtttcgcc
       61 ggtgcccacc gggagctgca gcgggtacga ccgcttgctc agccggtcgc ggatcatcgt
      121 gacacagcgc tcgaagttgg cgccgacacg atccatcttg ttggcgaaga tcatccgcgg
      181 cacgccgtag cggtcggcct ggcgccagac ggtctcggtc tgcggctcca ccccggcgac
      241 cgagtcgagc agcgtcaccg cgccgtccag cacgcggagc gagcgctcca cttccacggt
      301 gaaatccacg tggcccggcg tgtcgatgat gttgatccgg tacaggacgt catgccggtt
      361 ccagaagcag gtcgtcgcgg ccgaggtgat ggtgatcccg cgctcctgct cctgctccat
      421 ccagtccatg gtggcggcgc cctcatggac ctcgccgatc ttgtagttct tccccgtgta
      481 gtagaggatg cgctcggtgg tagtcgtctt cccggcatcg atgtgggcca tgatgccgat
      541 gttgcgatac cggtcgagcg atgtctcacg agccatggag tcgtctctaa aatccagcga
      601 aaaagcgggg cgaccgaccc ggcccgcgcc gccttccggc gcttccggtg gtatcgctcc
      661 gcgcgcatcc gggcagccgg ccctggatga gggcccccga agggccccac gcgttgtgtc
      721 ttggaggacc agaggtggcg ctgccttaag cgtcacgtga cccgatgttc gccccgaaaa
      781 agccgaagcc ccgcaaatct aagaggcggg gccccgatgt caacccacga gcggcgttgc
      841 gtttaagggc gggcccggga gcgcccgccc tgctaccagc ggtagtgcgc gaacgcccgg
      901 ttggcctcgg ccatccggtg ggtgtcttcc ttcttcttga tcgtgttccc ctcgcccttc
      961 gaagccagga tcagctccgc ggcgagccgc tcggccatgg tcttctcggt gcgggcccgg
     1021 gagaactgga tcagccagcg catggcaagt gcggtgcgcc ggtccggccg gacctccacc
     1081 ggaacctgga gcgaggcccc gccaacccgc cggctcttca cctcgagcgc cggcttggcg
     1141 ttgttgacgg cctgcttgaa caccgcgacc cccggctgcc ccgtccgctc ctcgataagg
     1201 tccatggcct tgtagaagat gccctcggac tggctcttct tgccctggta catgaggttg
     1261 ttgacgaact tcgagaccgt ctgactgtcg tatcgcggat cggccgggac cggccgcttg
     1321 acggacttgg accgccggct cacttggcgc ctcccttggc gcccgccgcc ttgggccgct
     1381 tggcgccgta cttggaccgg ccctggcggc ggtcgttcac gccggccgcg tccagggtgc
     1441 cccgcacgat gtgatagcgc acgcccggca ggtccttcac ccggccgccg cgaatgagca
     1501 cgatcgagtg ctcctggagg ttgtggccct caccggggat ataggcggtc acctcgaacc
     1561 cgttggtgag ccgcacgcgc gccaccttgc ggagcgccga gttgggcttc ttgggcgtgg
     1621 tggtgtagac gcgggtgcac acgccgcgct tctggggatt ccccttgagc gcgggcgcct
     1681 tgtccttggc ttcgacgtcg ctccggcctt gccggatgag ctggctgatg gtcggcataa
     1741 ccctgcggaa aatggcctga aacccaagcc cccggtttgg ggcagaccgg caagtttagc
     1801 gggggactga ccttaggtca aggcggccac ggcaacgacg ctggccgcgg cgtggccggc
     1861 cgtatgggtg atgctgatct cccactgccc aacgccgagg ccgtcggcga tctccttgca
     1921 cttgcccttg aggaggagct ccggcttccc ggacgggagc cgccgcacct cgatgtcggt
     1981 ccacgagacc ccccgggccc atccggtccc cagagccttc atgaccgctt ccttggcggc
     2041 gaaccggccc gcgaagaact ggacccggag cggccccgta cccgcctggg tctgctcgcc
     2101 ctcggtgaag agccggttgg cgaaccggtc gccgtgccgt tcgagcgcgg accggatgcg
     2161 gtcgatctcg acgaggtcga tgccgtggcc gatgacgttc atgggcgaaa tgtaccccgt
     2221 gcccgaagca cccgttacca ttccagccat gccctcccca ccgctgctgg ttcgcgggct
     2281 ccggaagacc tacggcgacg tactcgcggt ggacggcctc gacctcgagg tccgtgccgg
     2341 cgagtgcttc gggctgctcg ggccgaacgg cgcgggcaag accagcacca tcgagatctg
     2401 cgaaggcctc tccccgccgg acgcgggcga cgtggtcgtc ctcgggcgcc gctggggaga
     2461 gcaggatcga gagctgcgcg agcggctcgg catctcactg caggagaccc agttctccga
     2521 caagctcacg gtgggggaga cggtgagcct gttccggagc ttctaccgcc gcgggccggg
     2581 gcccgacgcg gtgatcgaca tggtgcagct cggggaaaag gccggcgcgc gggtggggcg
     2641 gctctcgggc ggccagaagc agcggctcgc cctcgcctgc gccctcgtgg gcgatcccga
     2701 gctgctcttt ctggacgagc cgaccacggg cctcgacccg caggcgcggc ggcagctgtg
     2761 ggagctgatc gaacggctcc gctcggaggg gcgctcgatt ctgctcacga cccactacat
     2821 ggacgaagcg gagcggctct gcgaccgcgt cgcgatcgtg gaccacggcc gggtgatcgc
     2881 ggagggcacg ccccgcgccc tgatcgcctc gttgggcgcg gagcacgtgc tcgagttcgc
     2941 ggtgggggag gggacggtgg acgacgggat gttcggggcg ctcgagggcg tgcgaggcgc
     3001 ggaccgccgg gacggcgtct accggctcca ggtcaccgag ctgcaccgcg cgatgcccgc
     3061 cctcctccac gcgctccggg accggggcgc ccacctcacc gagctccgaa cccactcccc
     3121 gacgctcgag gacgtgttcg tctcgctcac cgggcggtac ctgcgcgatg agtgacggcg
     3181 cccgaccgaa atggaccgcg cgctcgctcg tccagctcac cctcgtccgg taccgcgagt
     3241 tcatgcggga gccggaagcc gtcttctggg tgttcctctt ccccatcctg ctcgccgcgg
     3301 gcctgggcgt ggcgtttcgg agccggccgg ccgaccggac tgccgtggcg gtggccgggg
     3361 ccgattcgtc tgctcaggcg gtggccgaag cgctgggccg aagcccggac ctcggcgtcc
     3421 t
//
LOCUS       DATIFF010000638         3437 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1926974, whole genome shotgun sequence.
ACCESSION   DATIFF010000638 DATIFF010000000
VERSION     DATIFF010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3437
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1926974"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..695
                     /locus_tag="VLD58_09450"
     CDS             <1..695
                     /locus_tag="VLD58_09450"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSB54570.1"
                     /translation="FGDADPLGKQVQLGNDPGPRTVVGVMRDVRDVALDQPPPAMVYY
                     PFTQKPEAVFTLVVRTGHDPRPSLLAIRRQLATLDPELAVSLIRTMDELEASTLEQRR
                     FITVLLVGFAATALGMAAIGLYGLISYSVVQRAREIGIRLALGAAPARILRLLLREGG
                     VLALTGGLLGLLGSFLTSRLLRGQLVGVGALDPLALGGTVVLLLSVALIATLIPARRA
                     TRADPLQALREG"
     gene            762..2018
                     /locus_tag="VLD58_09455"
     CDS             762..2018
                     /locus_tag="VLD58_09455"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSB54571.1"
                     /translation="MPLAARHPFHALRHRNFRLFFIGQFISLVGTWMQVVAQGWLVLE
                     LSNSPFLVGLVTSLESLPILLLTLYGGVLADRVDRRRAIAFLQAGMLLESLALTILTA
                     THHVTVGWIMVLAPVLGTFSAFEVPIRQAFMMEMVGREDLINAIALNSSVFNLTRIVG
                     PVVAGGLIAGLGTTACFAANTVSFLAVIIAFSRMRPPFPGALEKKPDFQPTFRDGVRY
                     ALGTPEPRALLSLAAALSIFGLGPVLAMLPVYARQVLSLGAGGYGGLMSAIGVGAAMG
                     AIAMASLGHRIDRRRLIVTATLFFSSVLALTATHRSYPLALVGLAIIGFGSVLSAIST
                     NTLLQTDAPDHLRGRVLGFYSFVVLGLAPFGSLQAGWISEHFGVPVSFVVGAAACSLG
                     ALTLSWERRRRQALGALSRVSDRPVS"
     gene            2023..2643
                     /locus_tag="VLD58_09460"
     CDS             2023..2643
                     /locus_tag="VLD58_09460"
                     /inference="COORDINATES: protein motif:HMM:NF024587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidylate kinase-like family protein"
                     /protein_id="HSB54572.1"
                     /translation="MLITISRQFGTGGSEVARLVAQGLGWHVVDNEIVDRVANLAGLT
                     PDAVAEQDERAPGFVERLARALAASSQEFAVPEIGVAVRPAEPSLVRLTEMVVKEIAA
                     EGRAVLVGRAAPAVLGREAGVLHVRLVANRDYRIAAVMESEHLDRRGAERLMDSTDSE
                     RRRYHREHYGRNWEDPLHYHLLLNTGLLGVDAAAAIIVAAARRQGW"
     gene            complement(2660..>3437)
                     /locus_tag="VLD58_09465"
     CDS             complement(2660..>3437)
                     /locus_tag="VLD58_09465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="magnesium chelatase"
                     /protein_id="HSB54573.1"
                     /translation="NPEDYTARGKIITPLKHRIGSEIITHYPRTVELGMEITAQEAWS
                     RRPGQDIRVPEFVREVIERVAFEARTDKRVDKRSGVSQRLPISVLEHAISSAERRALV
                     YHEKVVVPRISDVYMALPSITGKLELEYEGELQGGEAIAKELIRRASGITMDERLGDI
                     SLDQIVHWFDNGGALKVRGDERSETCLKGFSMVPGLVDAAVAGGLAERGDAPVMVSAC
                     ELILEGLASEKRISRSEELGYVRARPERRDPGQGKGLSFG"
BASE COUNT          434 a         1204 c         1179 g          620 t
ORIGIN      
        1 tcttcggcga cgctgacccg ttggggaagc aggttcagct gggcaatgac cccgggccga
       61 ggacggtcgt cggcgtgatg cgcgatgtgc gcgatgtggc gctggatcag ccgccccccg
      121 cgatggtcta ctacccgttc acccagaagc cggaagcggt gttcacgctg gtggtgcgca
      181 ccgggcatga tccgcggccc tcgctgctcg cgatccggcg gcagctcgcc accctcgatc
      241 cggagcttgc ggtctccctc atccgcacga tggacgagct ggaggcgagc acgctggagc
      301 agcggcgctt catcacggtg ctcctggtgg ggttcgccgc caccgcgctc gggatggcgg
      361 cgatcggcct gtacgggctc atcagttact ccgtggtcca gcgcgctcgc gagatcggta
      421 tccgcctggc gctcggtgcg gcgcccgcga ggatcctgcg gctgctcctc cgggagggtg
      481 gcgtactggc gctgaccggc gggttgctgg gtctgctcgg gtcatttctc accagccgcc
      541 tgctgcgggg ccagctggtg ggggtcgggg cgctcgaccc cctggccctg ggcggaaccg
      601 tcgtgctgct gttgtcggtg gcgctgatcg cgacgctgat accggcacgc cgggccaccc
      661 gcgccgatcc gttgcaggcg ctgcgggagg gctagcggag cgagaccagc ccggaacggc
      721 ggcggctgca cactcccggc ccgacgcatt accgttggga tgtgccgctc gccgcccgcc
      781 accccttcca cgcgctccgt caccggaact tccggctctt cttcatcggg cagttcattt
      841 ccctggtcgg cacctggatg caggtggtgg cccaggggtg gctggtgctc gagctcagta
      901 actcgccgtt cctggtcggt ctggtcacct cgctcgagtc gctcccgatc ctgctgctta
      961 ccctctatgg cggggtactg gccgaccggg tggaccggcg ccgtgccatc gccttcctcc
     1021 aggccgggat gctgctcgag tcgctggcgc tcaccattct caccgccact caccatgtga
     1081 ctgtcggctg gatcatggtg ctggcgccgg tactcggcac cttctcggcc tttgaggtgc
     1141 ccatccgcca ggcgttcatg atggagatgg tagggcgcga ggacctgatt aatgccatcg
     1201 ccctcaactc ctcggtcttc aatctcaccc gcattgtcgg gccggtggtg gcgggcgggc
     1261 tcatcgcggg gctcggcacg accgcctgct ttgcggccaa cacggtgagc ttcctcgcgg
     1321 tcatcatcgc gttctcgcgg atgcggccgc ccttcccggg ggcgctcgag aagaagcccg
     1381 acttccagcc gaccttccgc gatggagtcc gttacgccct cggcacccca gagccacggg
     1441 cgctcctgag cctggccgcg gcgctcagca tcttcggcct gggtccggtg ctggccatgc
     1501 tcccggtcta tgcccgccag gtgctgagcc tcggagccgg cggctacggt ggcctcatgt
     1561 cggcgatcgg ggtgggggcg gcgatgggcg cgattgccat ggcctcgctg ggtcaccgca
     1621 tcgaccggcg gcgcctgatc gtaacggcca cactcttctt cagctcggtg ctggcgctga
     1681 ccgcgactca ccgctcctac ccgctcgccc tggtgggtct cgcgatcatc ggattcggga
     1741 gcgtgctgtc cgccatcagc accaataccc tgctccagac cgacgccccc gatcatctcc
     1801 gcggtcgggt gctcggcttc tactccttcg tggtgctggg tctcgccccg ttcggctcac
     1861 tccaggcggg gtggatctcg gaacacttcg gggtgccggt gagcttcgtg gtcggggcgg
     1921 cggcctgctc gttgggcgcc ctgactctct cctgggagag gcgccggcgt caggctctgg
     1981 gtgcactctc gcgcgtttcg gatcggccgg taagttgaag ccatgctgat taccatctcc
     2041 cgccagttcg gcaccggtgg atcggaagtc gcccggctcg tggcccaggg gctgggatgg
     2101 cacgtggtgg ataacgaaat cgtcgaccgg gtggcgaacc tggccggtct cacacccgac
     2161 gccgtcgccg agcaggacga gcgagccccg ggattcgtgg agcggctggc ccgtgcactg
     2221 gcggcctcat cccaggaatt cgcggtgccc gagatcgggg ttgcggtccg ccccgcggag
     2281 ccgagcctgg tgcggctgac ggaaatggtg gtgaaggaga ttgcggcgga agggcgggcg
     2341 gtgctggtgg ggcgggcggc tcccgcggtg ctggggcgcg aagccggcgt gctgcatgtg
     2401 cggctggtgg ccaaccggga ctatcgcatt gccgcggtca tggagtcgga acacctcgac
     2461 cgccgcggcg ccgaacggct gatggacagc accgattcgg agcggcgccg ttatcaccgg
     2521 gaacactatg gccgcaactg ggaggacccg ctccactacc acctgctgct caacaccggg
     2581 cttctcggag tcgacgccgc ggcggccatc atcgtcgccg cggcccgccg gcagggctgg
     2641 tagccccgcc agcgccacct cacccgaagc tcagtccctt cccctggccc gggtcccgcc
     2701 gctccggccg ggcccgcacg tagcccagct cctccgaccg gctgatccgc ttctcggagg
     2761 cgagcccctc gagaatcagc tcgcaggccg agaccatcac cggcgcgtcg cctcgttcgg
     2821 ccagcccgcc cgccaccgcg gcatcgacca ggccgggcac catgctgaag cccttgaggc
     2881 aggtctcgct tcgctcgtcg ccccggacct tgagcgcgcc cccgttgtcg aaccagtgga
     2941 cgatctggtc gagcgagata tcgcccagcc gctcatccat cgtgatgccc gaggcccggc
     3001 ggatcagctc cttggcgatg gcctcgccgc cctgcagctc gccttcgtac tcgagctcga
     3061 gcttgccggt gatcgagggg agggccatgt acacgtcgct gatccgtggc accaccacct
     3121 tctcgtggta gaccagggcc cgccgctcgg cgctcgagat ggcatgctcc agcacgctga
     3181 tcggcagccg ctggcttacc cctgagcgtt tgtcgacccg cttgtcggtg cgggcctcga
     3241 aggccacccg ctcgatcacc tcgcgcacga actccggcac ccggatgtcc tggccggggc
     3301 ggcggctcca cgcctcctgg gccgtgatct ccatccccag ctcgacggtg cggggatagt
     3361 gggtgatgat ttcggagccg atccggtgct tgagcggcgt gatgatcttg ccgcgggcgg
     3421 tgtagtcctc cggattg
//
LOCUS       DATIFF010000639         1805 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1158679, whole genome shotgun sequence.
ACCESSION   DATIFF010000639 DATIFF010000000
VERSION     DATIFF010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1805
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1158679"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1119)
                     /locus_tag="VLD58_09470"
     CDS             complement(<1..1119)
                     /locus_tag="VLD58_09470"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB54574.1"
                     /translation="MREWLARLRDWLRRGRLDRELAEELRFHREQLERESRGEGSDDE
                     EACFAARRRLGSVVAAQEESRDRWSWPWLDHFLKDARYALRGLRKSPAFTATVVGTLG
                     LGIGANAAMFGVIDRLMFRPHPGMHDPGRVHRIYLQYFDRERQRTTDGFEYTRFLDVK
                     KWTSSFDLYAGFADNSLAVGTGDRARERNVASVSAAFFDFFDIRPALGRFFLPSEDVT
                     PKGAPVAVLGWGFWQSEYGGKDVIGQTLQVRNILCTIVGVAPRGFVGVNDGEAPAVFI
                     PITTYAGYSPSQEDAATYFTQYHWGWMGVMVRRKPGVSRERASQDLSQAHVRSWDAEV
                     AQTPHMTPARISRPSAIAGAMRPAAGPDAGLESKTLLWV"
     gene            complement(1154..1489)
                     /locus_tag="VLD58_09475"
     CDS             complement(1154..1489)
                     /locus_tag="VLD58_09475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HSB54575.1"
                     /translation="MTTQPRRELLPGTLDMLILKSLTLQAMHGYGIAQHIHRLSQDVI
                     RVEEGSLYPALQRMRQKGWIQAEWRLTPNNQWARYYSITRPGRRQLGLQETGFADLMS
                     AIARVMRPA"
     gene            1606..>1805
                     /locus_tag="VLD58_09480"
     CDS             1606..>1805
                     /locus_tag="VLD58_09480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54576.1"
                     /translation="MRLVLRWGFLILATGGAAWLGGRSWLRARRAGPLHLSAVARDSL
                     GPAGPCTLEPRAERSDCYRAALT"
BASE COUNT          267 a          619 c          641 g          278 t
ORIGIN      
        1 gacccagagc agggtcttcg actcgagccc cgcatcgggg ccggcggcgg ggcgcatcgc
       61 ccccgcgatg gccgagggtc gcgaaatgcg cgccggcgtc atgtgtggag tctgcgcgac
      121 ttccgcatcc cagctccgga cgtgcgcctg actcaggtcc tgactggcgc gctctctgga
      181 cacacccggc ttccgtcgca ccatcactcc catccacccc cagtggtact gggtgaagta
      241 ggtggcggca tcctcctggc tgggggagta gccggcgtac gtcgtgatgg gaatgaagac
      301 cgcgggcgcc tccccgtcgt tgacgccgac gaaccccctg ggtgccaccc cgacgatggt
      361 gcagaggatg ttccggacct ggagggtctg tccgatcaca tccttcccgc cgtactcgct
      421 ctgccagaac ccccatccca gcacggccac gggggcccct ttcggcgtta catcctccga
      481 gggcaggaag aagcggccga gcgcggggcg gatatcgaag aaatcgaaga aggcggcgct
      541 caccgaggcg acgttgcgct cacgggcccg gtcaccggtg ccgaccgcga gggagttgtc
      601 ggcgaagccg gcgtaaaggt cgaacgacga agtccacttc ttcacatcga gaaagcgcgt
      661 gtactcgaat ccgtcggtgg tgcgctggcg ctcccgatcg aagtactgga ggtagatccg
      721 gtgcacccgg ccgggatcgt gcatcccggg atggggtcgg aacatcagcc ggtcgatgac
      781 cccgaacatc gccgcgttgg ccccgatgcc gagcccgagc gtgccgacga ccgtggcggt
      841 gaaggcgggc gacttgcgga gcccgcgcag cgcgtaccgg gcgtccttga gaaaatggtc
      901 gagccacggc cacgaccacc ggtcccgcga ctcctcctgc gcggcgacga cgctgcccag
      961 tcggcggcgg gcggcgaaac aggcctcttc gtcgtcggag ccctcgcccc gggattcccg
     1021 ttcgagctgc tcgcggtgga accggagctc ctcggcgagc tcgcggtcga gtcggcccct
     1081 gcggagccag tcgcggagtc gggcaagcca ttcgcgcatg gagacctcgg gcgtcggaat
     1141 cgtggaaacg tgatcaggcg ggccgcatga cccgcgcgat ggcggacatc agatcggcga
     1201 agcccgtctc ctgcaggccg agctgcctcc tccccggccg ggtgatgctg tagtagcggg
     1261 cccactggtt gttgggtgtc aggcgccact cggcctggat ccagcccttc tgccgcatcc
     1321 gctgcagggc ggggtagagg gagccctcct cgacgcggat cacgtcctgg gagagccggt
     1381 ggatgtgctg ggcgatcccg tacccgtgca tcgcctgcag ggtgagggac ttgaggatca
     1441 gcatgtcgag cgtgccgggg agcagctccc gccggggctg ggtcgtcatg ggaaggccat
     1501 agatggtcta tgccatagac ggactggggc cggaaaaggt tgcaccgggc gccgggcggg
     1561 accggtcttg cccccgctcc gggcttccgg ccatcttggc cccccatgag gctggtgctc
     1621 cgctggggat tcctgattct cgccacggga ggggccgcct ggctcggggg ccgcagctgg
     1681 ctccgcgccc gccgggccgg gccgctccac ctctccgccg tggcgcggga ttccctcggc
     1741 ccggccggcc cctgcaccct cgagccccgt gccgaacgga gcgactgcta ccgcgccgcg
     1801 ctgac
//
LOCUS       DATIFF010000640         1552 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1159014, whole genome shotgun sequence.
ACCESSION   DATIFF010000640 DATIFF010000000
VERSION     DATIFF010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1159014"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..860)
                     /locus_tag="VLD58_09485"
     CDS             complement(<1..860)
                     /locus_tag="VLD58_09485"
                     /inference="COORDINATES: protein motif:HMM:NF017046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P N-terminal domain-containing
                     protein"
                     /protein_id="HSB54577.1"
                     /translation="MPLHRHPALSRFSLLGLLLVTAAVPLGAQITLQEYQARRDSLAA
                     RIGDGVVVAFGGRTPVTDFGPFFQLPAFHYLTGYDHADATLVSVVQGGRATSRLFAAR
                     STPRRALYYGPEPDSAAIQRDLGLTFRSSDDLPVVLDSLAGAGAAFFTLRDFEDADFQ
                     TADSLTRGGQMMKALQARHPGLQVSDAQPIVNRLRARKSPAELALIRKAAEVSVAGHR
                     AMMARIAPGMHEYDLQAIAEYTFRRLGSERPAYGSIVGSGPNGTQLHYMKDRRELRPG
                     EVVVIDAGAE"
     gene            complement(1001..>1552)
                     /locus_tag="VLD58_09490"
     CDS             complement(1001..>1552)
                     /locus_tag="VLD58_09490"
                     /inference="COORDINATES: protein motif:HMM:NF012892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporting ATPase C-terminal
                     domain-containing protein"
                     /protein_id="HSB54578.1"
                     /translation="STVAVSSLFLAWIPLLPAQILLNNLLSDVPLLTIATDRVEPSWL
                     RRPRRWNIGLIGRFMVWFGLLSAAFDLVLIGILLLVLRTGPELFRTAWFVESACSEIL
                     VTFAIRSRAPLWRSAPSPLLVAASLVCGAGVVALPFTGLGQRLFSFQPLPAPVLATVG
                     AVLLGYLAAAEIAKRPFFRRHLP"
BASE COUNT          279 a          508 c          575 g          190 t
ORIGIN      
        1 tattctgcgc ccgcgtcgat caccaccacc tcgccgggcc gcagctcccg ccgatccttc
       61 atgtagtgca gctgtgtccc attgggcccg gaccccacga tcgagccgta agcgggtcgc
      121 tccgagccga gccggcggaa cgtgtactcg gcgatcgcct gcagatcgta ctcgtgcatg
      181 ccgggcgcga tccgggccat catggcgcgg tggcccgcga cactgacctc ggcggccttc
      241 cggatcaggg ccagctccgc cggactcttc cgggcccgga gccggttgac gatcggctgg
      301 gcgtcgctca cctggagccc cgggtggcgt gcctgcaggg ccttcatcat ctgcccgcca
      361 cgggtgagcg agtccgccgt ctggaagtcg gcgtcctcga aatcccgcag ggtaaagaac
      421 gccgcgcccg cgcccgcgag cgaatcgagc acgacaggca ggtcgtcact cgagcggaag
      481 gtgaggccaa ggtcccgctg gatggccgcg gagtcgggct ccggtccgta gtagagcgcc
      541 cgccgcgggg tgcttcgagc cgcgaagagc cggctggtgg cacggccgcc ctgcaccacg
      601 ctcaccaggg tggcgtcggc gtggtcgtat ccggtgagat aatgaaaggc aggaagctgg
      661 aagaagggcc cgaagtcggt aaccggggtt cgacctccga atgccaccac gaccccatcc
      721 ccgatgcgag ccgccagcga gtcccggcgg gcctggtatt cctgcagggt gatctgggcc
      781 ccgagcggca cggcggcggt caccaggagg aggccgagca gtgagaaccg cgacagcgcg
      841 ggatggcggt ggagaggcat gagaccggga agtgagagtg ggaaggtacc cgaagcgaat
      901 ggcgcctcga acaataccag ggatccgccg tctggctcaa acccgcggcg gggaactggg
      961 aactcggcac gcggcacgcg gcaggcggca cgcggcacgc tcagggcagg tgccgcctga
     1021 agaacggtcg cttggcgatt tccgcggcgg cgagatagcc gagcaggacg gcgccgacgg
     1081 tggccaggac gggagcgggc aggggctgga agctaaagag ccgctgcccc agcccagtga
     1141 acggcagtgc gaccacgcct gccccgcata ccagcgacgc ggcgaccagg agcggactcg
     1201 gtgcactccg ccagagcggc gccctggagc ggatggcgaa ggtgaccagg atctccgagc
     1261 aggccgactc gacgaaccag gcggtgcgga acagctccgg cccggtgcgg agcaccagca
     1321 gcaggatgcc gatgaggacg aggtcgaacg cggcgctcag cagcccgaac cagaccatga
     1381 accggccgat cagcccgatg ttccagcggc gcgggcggcg cagccatgac ggctccaccc
     1441 ggtcggtggc gatggtgagc aggggcacgt cgctcagcag gttgttgagc aggatctgcg
     1501 ccgggaggag cgggatccac gccaggaaga gcgaggacac cgcgaccgtg ct
//
LOCUS       DATIFF010000641         7108 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1159112, whole genome shotgun sequence.
ACCESSION   DATIFF010000641 DATIFF010000000
VERSION     DATIFF010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7108
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1159112"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(92..2500)
                     /locus_tag="VLD58_09495"
     CDS             complement(92..2500)
                     /locus_tag="VLD58_09495"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB54579.1"
                     /translation="MPGTAKEQWLSDALDMVASLATFRGDEPRNLTPAVVLASARPVL
                     RRLFTFERSAFLLLDADGLGFHLMDVDPPSAEMMLEQEMDALVAAGEFAFAAQRTAPV
                     QVPTRTMPGGTVLLHTLATRSRVLGMFFGMAEGSLAETPDVHYKLLSILLGNLGSALE
                     SCELYRELAEYSEGLEQLVEKRTHELVLSNQKAQAANRAKSEFLANMSHELRTPMNGV
                     IGMASLLLETDLSPEQRDFAHTLHHSANSLLSLLNDILDLSKIEAGRLVLEPLPFDLQ
                     ETLDDVVALLGTKAVDKGLSFVARIDPALPRRLVGDRGRLRQVLTNLVGNAVKFTSSG
                     TVEVRLSLKSRTASMVVFRLEVQDSGIGIPAAHRHHIFEKFTQADASTTRRYGGTGLG
                     LAICRELAEIMGGSIGVDGEEGVGSTFHCTFAMPISQDQPAEPPALTGQRILLAVSHP
                     GEREMLAELLRAEGAVVREGEPSEATREEIPLVDQAHLPAAASLPRVVALVNPGHRHE
                     LAGPAVSRPIRRDDLLAALTGAPAPRPNDPGVVATPSPVTAARILLVEDTLVNQKVAV
                     SMLKRLGHSVEIAQNGREAVERTAGESFAVVLMDCQMPEMDGFEATRHIREREKGSSR
                     RTPIVAMTAHAMQGDRERCLAGGMDDYIPKPVRREALEAVLQRWLPSDPQAAVCSAPA
                     APDSVISGEVLHGLRELEAAGQEGLLAELARLFGDQGWMLLDEIRNAALAGRVEELVA
                     RLHTFKGTAGSVGAKRLAECCREFELAAPALSRSASLDRVERLATEFERARTALLQEV
                     ASHA"
     gene            complement(2500..3348)
                     /locus_tag="VLD58_09500"
     CDS             complement(2500..3348)
                     /locus_tag="VLD58_09500"
                     /inference="COORDINATES: protein motif:HMM:NF020252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDOD domain-containing protein"
                     /protein_id="HSB54580.1"
                     /translation="MTRASDLLKGLVSVATLPGVYLKLNEVVSDPRSSAADVGRVIAE
                     DPGLTARLLKLVNSAMYNFPSRIETVSHAISIVGTAQLQDLALATSVIRLFARMPQGM
                     VTMESFWRHSVACGVTARALAARRRETNVERYFVAGLLHDIGRPIMYTQLPEQCRAAV
                     TRSRDEKIPLVAMEHQLLGFDHTHVGNALLEQWKLPPALREAVAQHHHPDRARRFPTE
                     AAVVHVADILANAMGLGSSGEAGIPPFVPEAWQAIGLPPTVLGDLMEESERHYEAAVQ
                     VIAVDH"
     gene            complement(3345..3695)
                     /locus_tag="VLD58_09505"
     CDS             complement(3345..3695)
                     /locus_tag="VLD58_09505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54581.1"
                     /translation="MSLATMVPVEDLEPGMVLADEIRDQQGRLLMPAGTELTTRHLRA
                     FQLWGILNVRITSGDTGAEPAEPPLTRGELEAGRALVLARLRGTDPSHPFIAELVQLC
                     TVREARRLARGSAS"
     gene            complement(3692..4273)
                     /locus_tag="VLD58_09510"
     CDS             complement(3692..4273)
                     /locus_tag="VLD58_09510"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB54582.1"
                     /translation="MRILAVEDDPVTRRVLTAVLERLGHVALTAVDGVSGWEHFELEQ
                     PDVVITDWMMPRMDGIALTRRIRSAARERYTYVIMITALTGKDRWLDGMNAGADDFLA
                     KPLDKEELHARLRVAERILGLQTVVRQLEGLLPICSYCKKIRDEEEHWCQVEEFVTRK
                     TEATFSHGICPECYERHLRPQLDRVNQQMGGGA"
     gene            complement(4275..5390)
                     /locus_tag="VLD58_09515"
     CDS             complement(4275..5390)
                     /locus_tag="VLD58_09515"
                     /EC_number="3.1.1.61"
                     /inference="COORDINATES: protein motif:HMM:NF001965.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_function: GO:0050568 - protein-glutamine glutaminase
                     activity [Evidence IEA];
                     GO_process: GO:0006482 - protein demethylation [Evidence
                     IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0018277 - protein deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator protein-glutamate
                     methylesterase"
                     /protein_id="HSB54583.1"
                     /translation="MPKIRVLVVDDAVVVRKIVTDVLAADPEIEVVGTAANGRLALGK
                     LALLTPDLVTLDIEMPELDGLQTLVEIRKTHRRLPVIMFSTLTERAAAATLDALARGA
                     SDYVTKPSNVGSVQLAQERIRAELIPKIKALCGRKPVVPVAATRPAAAPVKAVVTPRP
                     ALPVRLDVLAIGVSTGGPNALAEIIPALPAEYPLPVVIVQHMPPLFTRFLAERLSSIS
                     ALTVREGEDGAVLEPGTVWVAPGNYHMTLRRDADRIRLALNQEPHENSCRPAVDPLFR
                     SVAEVYGNRALGLVLTGMGHDGLAGAEVMRQAGGTILAQDEATAVVWGMPGAVVSAGL
                     ADLVLPLDQVATELVLRAQTGRLAKLPAARPSSSLAC"
     gene            complement(5394..5765)
                     /locus_tag="VLD58_09520"
     CDS             complement(5394..5765)
                     /locus_tag="VLD58_09520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB54584.1"
                     /translation="MRALVVDDSRAIRSIIGKTVKELGFEVLEAGHGREALERLAGAG
                     RVDLILVDWNMPEMNGYDFLVAARQSPDWKDTVIMMVTTETEMSQMQRALDAGANEYV
                     MKPFTREALREKLQLVGLVTT"
     gene            complement(5793..6341)
                     /locus_tag="VLD58_09525"
     CDS             complement(5793..6341)
                     /locus_tag="VLD58_09525"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB54585.1"
                     /translation="MRILIAEDDRTSRLVLERTITRLGYELSSAEDGEEALSLFHRDR
                     PQVVITDWMMPRLDGLELCRRIREETIHDRYTYLIVLTALGGKQNYLEAMDAGTDDFI
                     TKPFDTDELVTRLRVAERIVGMEQAMSQLESMLGCCPDCRRVPGKDGKWLTLRQLAAM
                     PVAADRPAARCPGCRKAEAKRA"
     gene            complement(6550..6933)
                     /locus_tag="VLD58_09530"
     CDS             complement(6550..6933)
                     /locus_tag="VLD58_09530"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSB54586.1"
                     /translation="MTPEQPSRREFSRVLVHLKAEVRADGKVHREGTMENLSLKGGFF
                     RTSARIRDGLSVDVRLHLDGTDIEVHTRGFVVRGGPDGFAVQFTEIVGLDSLEHLRNI
                     ILLNTHDPRQVEEEFHSHLGLKRAE"
BASE COUNT         1077 a         2465 c         2440 g         1126 t
ORIGIN      
        1 cacccagacg ttcgcgatcg cgagacgggg cagcaccagc atgatgacga gttccgccag
       61 gaacatcgcg gccacgacca gtgccaggcg cctacgcatg ggaggccacc tcctgcaaca
      121 gcgcggtccg ggcccgctcg aactcggtgg ccaggcgctc cacccggtcg agactcgcgc
      181 tgcgcgacag ggccggcgcc gcgagttcga actcgcggca gcactccgcc agccgcttcg
      241 cacccaccga cccggcggtg cccttgaagg tgtgcaagcg cgcgacgagt tcttcaacgc
      301 ggcctgccag cgcggcgttg cggatctcgt cgagcagcat ccaaccctgg tctccgaaga
      361 gccgggccag ctcggcgagg agcccttcct gcccggcggc ttccagctcg cggaggccgt
      421 gaagcacctc gccgctgatc acggagtcgg gggccgccgg cgcggagcac accgcggcct
      481 gcgggtcgga cggaagccag cgctgcagta ccgcttccag cgcctctcgc cgcaccggct
      541 tcgggatgta gtcgtccatg ccgccggcaa gacagcgctc gcggtctccc tgcatggcat
      601 gggcagtcat ggcgacgatc ggagtccggc gggaactgcc cttttcgcgc tcgcgaatgt
      661 ggcgggtggc ttcgaatcca tccatttccg gcatctggca atccatcaga acgaccgcga
      721 acgactcgcc tgcggtgcgc tccacggctt cccgaccatt ctgggcaatc tccaccgagt
      781 ggcccagccg cttgagcatg ctcaccgcca ccttctggtt caccagggtg tcttcgacga
      841 gcagtatccg ggccgcggtt accggtgacg gcgtggcgac cacgcccgga tcgttcggcc
      901 ggggggccgg cgctccggtg agcgcggcca gcaggtcatc ccggcgaatg ggccggctca
      961 ccgcggggcc ggcgagctcg tgccgatggc ccggattcac cagcgccact acccgaggca
     1021 gcgacgccgc cgccggcaga tgggcctgat cgaccagcgg aatctcctcc ctggtcgcct
     1081 ccgacggttc cccttcccgc actaccgccc cttcggccct gagcagctcg gccagcattt
     1141 cccgttcacc gggatgactc acagccagga ggatgcgctg ccccgtgagt gccggcggct
     1201 cggccggctg atcctgggag atcggcatcg cgaacgtgca gtgaaaggtg ctgcctactc
     1261 cctcttcccc gtcgaccccg atgctgccgc ccatgatctc cgccagctcc cggcagatgg
     1321 cgaggccgag tccggtgcca ccgtagcggc gggtggtgga ggcatcggcc tgggtgaact
     1381 tctcgaagat gtggtgccgg tgggcggccg ggatgccgat gccggagtcc tgcacctcga
     1441 gccggaacac caccatgctg gcggtgcggg acttgagcga caaccgcacc tcgacggtgc
     1501 cgctgctggt gaacttgacc gcgttcccca ccaggttggt gagcacctgc cggagccggc
     1561 cccggtcgcc caccagccgg cgcggcagcg ccgggtcgat ccgcgccacg aagctgagtc
     1621 ccttgtccac cgccttggtc ccgagcaggg cgaccacgtc gtcgagggtc tcctgcaagt
     1681 cgaacgggag cggctccagc accagccgcc ccgcctcgat cttggagagg tcgaggatat
     1741 cgttgagcag cgagagcagg gagttggccg aatggtgcag cgtgtgggca aagtcacgct
     1801 gctccggact gaggtcggtc tccagcagga ggctcgccat gccgatcacc ccgttcatcg
     1861 gcgtgcgaag ctcgtggctc atattggcga ggaattcgct cttggcgcgg ttggcggcct
     1921 gggccttctg gttggacagc accagctcgt gggtccgttt ctcgaccagt tgttccaggc
     1981 cttcgctgta ctcggccagc tcgcggtaca gctcgcagct ctcgagcgcg ctccccaggt
     2041 tgccgagcag gatcgacagc agcttgtagt ggacatcggg ggtctcggcc agggacccct
     2101 ccgccatccc gaagaacatc cccagcaccc gtgaacgggt ggcgagggtg tggagcagca
     2161 ctgtgccgcc gggcatggtg cgggtgggca cctggaccgg ggcggtgcgc tgggcggcaa
     2221 aggcgaattc ccccgccgcc accagcgcgt ccatttcctg ttccagcatc atctcggccg
     2281 agggcgggtc gacgtccatg aggtggaagc ccaggccgtc ggcatcgagc agcaggaagg
     2341 cggagcgctc gaaggtgaag aggcggcgaa gcaccggccg ggccgaggcc agcaccaccg
     2401 cgggcgtcag gtttcggggc tcgtcacccc ggaaggtcgc cagcgacgcg accatgtcga
     2461 gcgcgtcgga gagccattgc tccttggcgg tgcccggcat cagtggtcaa cggcgatgac
     2521 ctgcaccgcc gcctcgtagt gccgctcgga ttcctccatg aggtcgccga gtacggttgg
     2581 tggaagcccg attgcctgcc aggcctccgg cacgaaaggg ggtatgcctg cttcgccgct
     2641 ggagccgagc cccatggcat tcgccaggat gtcggccacg tgcaccacgg ccgcttcggt
     2701 ggggaatcgc ctggcccgat cgggatggtg gtgctgggcc acggcctccc ggagcgcggg
     2761 cggcagcttc cactgctcga gcagcgcgtt gccgacatgg gtgtggtcga acccgaggag
     2821 ctgatgctcc atggcgacca ggggaatctt ctcgtcccgg ctccgcgtca ccgcggcacg
     2881 gcactgctcc gggagctggg tgtacatgat aggccggccg atgtcatgca gcagcccggc
     2941 cacgaaatag cgctcgacgt tggtttcccg gcggcgggcg gcgagcgccc gggcggtgac
     3001 gccgcaggcg acgctgtggc gccagaacga ttccatcgtc accatcccct gcggcatccg
     3061 ggcgaagagc cggatcaccg aggtggcgag cgccaggtcc tggagctggg cggtgcccac
     3121 gatgctgatc gcgtggctca ccgtctcgat gcgcgagggg aaattgtaca tcgcgctgtt
     3181 gaccagcttg aggagccggg cggtgaggcc cggatcctcg gcgatgaccc gtcccacgtc
     3241 ggcggccgaa ctccgcggat cgctcaccac ctcgttgagc ttgaggtaga cgccggggag
     3301 cgtggcgacg ctcaccaggc ccttgaggag atcggaggcc cgggtcatga cgcgctgccc
     3361 cgtgcgaggc ggcgagcctc gcgcaccgtg cagagctgca ccagctcggc gatgaacgga
     3421 tgggatggat cagtgccgcg gaggcgcgcc agcaccagcg cgcgacccgc ctcgagttcc
     3481 ccccgtgtca gcggcggctc ggccggctcg gcgccggtgt cacccgaggt gatccgcacg
     3541 ttcaggatgc cccagagctg gaaggcccgg aggtgccggg tggtgagctc ggtgccggcc
     3601 ggcatgagga gccgcccctg ctggtcccgg atctcgtcgg ccagcaccat cccgggttcg
     3661 aggtcctcca ccggcaccat ggtggcgagg ctcatgcgcc accgcccatc tgctggttca
     3721 cccggtcgag ctggggccgg aggtgacgct cgtagcactc gggacagatc ccgtgcgaga
     3781 aggtcgcctc ggtcttccgg gtgacgaact cttccacctg gcaccagtgc tcttcctcgt
     3841 cccggatctt cttgcagtag gagcagatcg ggagcagccc ctcgagctgc cgcaccacgg
     3901 tctggagtcc gaggatccgc tccgccaccc ggagccgggc gtgcagctcc tccttgtcga
     3961 gcggcttggc gagaaaatcg tcggcgcccg cgttcatgcc gtcgagccag cggtccttgc
     4021 cggtcagggc ggtgatcatg atgacgtagg tgtagcgctc ccgggccgcg gaccggatcc
     4081 gccgggtcag cgcgatcccg tccatccgcg gcatcatcca gtcggtgatg accacgtcgg
     4141 gctgctccag ctcgaagtgc tcccagccgc tcacgccgtc gaccgccgtc agcgcgacgt
     4201 gcccgagccg ctcgagcacc gccgtcagga cccggcgcgt gaccggatcg tcctcgaccg
     4261 cgaggattct catgtcagca ggccagcgaa gaggaaggac gcgcggcggg cagcttcgcg
     4321 aggcggccag tctgggcccg caggaccagt tcggtcgcca cctggtcgag cggcagcacc
     4381 aggtcggcca accctgcgct gactaccgcg ccgggcatgc cccagaccac ggcggtggct
     4441 tcgtcctgtg ccaggatggt accgccggcc tgacgcatca cctcggcgcc ggccaggcca
     4501 tcatgcccca tgccggtgag caccagcccc agggcgcgat tgccatagac ttcggccacc
     4561 gagcgaaaga gcggatcgac cgcggggcgg caggagttct cgtgcggctc ctgattgagc
     4621 gccagccgga tgcggtcggc atccctgcgg agcgtcatgt gatagttgcc gggcgccacc
     4681 cagaccgtgc cgggctcgag cactgcgccg tcctcaccct cgcgaacggt gagggccgaa
     4741 atcgatgaca gccgttcggc gaggaaccgg gtgaacagcg gcggcatgtg ctgcacgatg
     4801 accacgggaa gcggatactc ggccgggagc gcggggatga tctcggccag cgcgttgggg
     4861 ccgccggtgg acaccccgat ggccagcacg tccagccgca ccggcaacgc cgggcgtggg
     4921 gtgacgactg ccttcacggg cgcggccgcg ggcctggtgg ccgccactgg caccacgggc
     4981 ttccgcccgc agagggcctt gatcttggga atgagctctg cgcggatccg ctcctgcgcc
     5041 agctgcacac tgccgacgtt ggagggcttg gtgacgtagt cggaggcgcc ccgcgcgagc
     5101 gcgtcgagcg tggccgccgc ggcccgctcg gtgagggtgc tgaacatgat caccggcagc
     5161 cgccggtggg tcttccggat ctcgaccagg gtctgtagcc cgtcgagctc cggcatctcg
     5221 atatcgaggg tgacgagatc cggggtgagc agggcgagct tcccgagcgc cagccggccg
     5281 ttggccgcgg tgcccaccac ctcgatctcg ggatcggcgg cgagcacgtc ggtcacgatc
     5341 ttccggacca ccacggcgtc gtccaccacc agcacgcgga tcttcggcat gggtcaggtg
     5401 gtgaccagac ccacgagctg gagcttctcg cgcagtgcct cgcgggtgaa cggcttcatg
     5461 acatactcgt tcgccccggc atcgagcgcc cgctgcatct ggctcatctc ggtctcggtg
     5521 gtcaccatca tgatgacggt gtccttccag tccggactct gccgcgccgc gaccaggaaa
     5581 tcgtagccgt tcatttcggg catgttccag tcgaccagga tcaggtcgac ccggccggcc
     5641 ccggcgaggc gctccagcgc ttcccgcccg tgccccgcct cgaggacctc gaagccgagc
     5701 tccttcacgg tcttcccgat gatgctgcgg atggcccgcg aatcgtctac caccagcgcg
     5761 cgcactgagg cctcctctgg atgtgaacgt ccctacgccc gtttcgcttc ggccttgcgg
     5821 cagccgggac agcgcgccgc cggccggtcg gccgcgaccg gcatggccgc gagctgccgg
     5881 agcgtgagcc acttcccgtc cttgcccggc acccggcggc agtcgggaca gcagcccagc
     5941 atgctctcga gctggctcat cgcctgctcc atgcccacga tccgctccgc cacccggagg
     6001 cgggtcacca gctcgtcggt gtcgaacggc ttggtgatga agtcgtcggt cccggcgtcc
     6061 atcgcttcca ggtagttctg cttcccgccc agcgccgtca gcacgatcag gtaggtgtag
     6121 cgatcgtgga tggtctcctc gcggatccgg cggcaaagct cgagtccgtc gagcctgggc
     6181 atcatccagt cggtgatgac cacctggggc cggtcgcggt gaaacaggct cagcgcttcc
     6241 tcgccgtctt ccgccgagct cagctcgtac cccagcctgg tgatggtccg ttccagcacc
     6301 agccgtgagg tacggtcatc ttccgcgatc agaatccgca cagagcctcc actggggccc
     6361 cggaacagcc cgggacgcac ctctcaagta tcggcagcgg aagtggttgg cttgacttgg
     6421 gctgagccgg tggggctggg ggcacagagg gccggaggcc ggaggcgggt ggaggcggga
     6481 gagggaccga aggccggccg caggagcgga ctccggcctt cgccggcctc ccgcctccgg
     6541 cctcctgccc tattcagccc gcttgagccc caggtggctg tgaaactcct cctcgacctg
     6601 gcgggggtcg tgggtgttga ggaggatgat gttcctgaga tgctccaggc tgtcgagccc
     6661 cacgatctcg gtgaactgca ccgcgaagcc atccggccca ccccgcacca cgaacccgcg
     6721 ggtgtgcact tcgatatcgg tgccatcgag atggagccgc acgtcgaccg aaaggccatc
     6781 gcggatccgg gcgctggtcc ggaagaaccc gcccttgagg ctcaggttct ccatcgttcc
     6841 ctcacggtgc accttgccgt cggcccgcac ctcggccttg agatgcacca gaacccggct
     6901 gaattcgcgg cgggatggtt gctcgggtgt catgcggcgc ctcccatgtc ggccttccgg
     6961 atcaggcgca ccaccagggg cgcgccctga caatcgaacg agacgctggt gagcagctca
     7021 catccgggga accgggtcga caggtcctgg ccctctacca ccgtgggcag cgatagctgg
     7081 cagggttcgg gaagcagcga cttcacat
//
LOCUS       DATIFF010000642         5773 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_81747, whole genome shotgun sequence.
ACCESSION   DATIFF010000642 DATIFF010000000
VERSION     DATIFF010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5773
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81747"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..298)
                     /locus_tag="VLD58_09535"
     CDS             complement(<1..298)
                     /locus_tag="VLD58_09535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54587.1"
                     /translation="MTRMGARASPLLAPGLLLLLLAPGLGAQQRCAPSMTALAQSWAP
                     PLDRPVSLVATGLSLRDALDRTAAAARLHFSYSSDHLPLDREVCVEATDAPVGAV"
     gene            complement(295..1278)
                     /locus_tag="VLD58_09540"
     CDS             complement(295..1278)
                     /locus_tag="VLD58_09540"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HSB54588.1"
                     /translation="MPEPETDRAEALARLLAGESSPEEQAALRQWLAQSPDDEAAFRL
                     LQQSAGRLTGPKVDVDAAWRRVAGRLPQTDAVTPLQPHVRWQPLLALAAVLALAVIGG
                     LWAWQRAARPPMLAYSAPAGVPQVIPFDGGRMILAPRSRLVARHRAGMRPDQVRLEGE
                     AWFEVAHDPARPFEVRVGDAVVTDLGTVFSVRGTHDGAVEVAVLEGSVSLKSASGQSV
                     VIAGGNSGRAESGTVTRAPLASSERPDWLDGTLEFHDAPMSQVQAELRRWYGLELRLG
                     DSTLAARHVTASFQGDSVARVLRVIALALGASVEQRGDTAVLNLSSAPSPE"
     gene            1402..1968
                     /locus_tag="VLD58_09545"
     CDS             1402..1968
                     /locus_tag="VLD58_09545"
                     /inference="COORDINATES: protein motif:HMM:TIGR02985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-70 factor"
                     /protein_id="HSB54589.1"
                     /translation="MTSPSHLAALKAGDSAVFEQIFREHYARLVSIGDRLLRDPARSE
                     DLAQDVLLELWRGRSRLDDSVPVSAYLYRAVRNRALNELRHRRVVRETAPRLGYQEHT
                     APADLSYEEKEQDAAVRRAIAELPERCREVFELSRVDQLSYAEIAEVMGITIKTVEAH
                     MGKALRALRVALGPWLPEARGRVGGSNG"
     gene            2036..2932
                     /locus_tag="VLD58_09550"
     CDS             2036..2932
                     /locus_tag="VLD58_09550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54590.1"
                     /translation="MRRYLTPIAAVLVLGLAACQDSGSPSTSSALTDAFATVPLGFGE
                     VQSTFPNSADSGLINWSPGGHRMGGFHDRGGMMCGGERGFLNFPLLFGLGRGFFHGEF
                     FGTCAFNATTGRVECDTVVRHGLSVVRSAAYTDAGGAVQEHFDSLTNTVNVKVDVSGT
                     FTRHDDDTSTVEHHSDRTVTGLARGSAARTVSGTSAGTETTTGTDSTGSFTAVRTVGD
                     TINDVVLPVPTDSTRPLPASGSIIRAMSATVTYSGQSPVTSSRREVITFDGSSTATVV
                     ITKDGVTKNCTLSLPRGHLSCS"
     gene            complement(3014..3853)
                     /locus_tag="VLD58_09555"
     CDS             complement(3014..3853)
                     /locus_tag="VLD58_09555"
                     /inference="COORDINATES: protein motif:HMM:NF013143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HSB54591.1"
                     /translation="MDQLIHSLWLAPLVACMVIVAIHSYLGVHVIAREVIFVDLSLAQ
                     VAALGSTVAIFLGAEPDSARSFAYALAFTTIGAALFALTRSKHGAGRVPQEAIIGIVY
                     VVASAAGLLVADKSPRGGEAIKDILVGSLLWVGWPAIGRLAAVYVVVGVFHWILRRRF
                     LTISFDPESAEREGWKLRLWDFWFYLSFGIVITFSVPIVGVLLVFSFLVVPAAIAFQF
                     TRRHGYLALISWVAGVLASAIGIAISFRYDLPTGPVVVCVFGLGLLLTWALRRGLLKP
                     AAA"
     gene            complement(3853..4893)
                     /locus_tag="VLD58_09560"
     CDS             complement(3853..4893)
                     /locus_tag="VLD58_09560"
                     /inference="COORDINATES: protein motif:HMM:NF013465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HSB54592.1"
                     /translation="MFLAALTLAAALSADPPKAHGAASVKVVTSLTTYGAIAREIVGD
                     RGTVTSIAQGDEDPHFVQPKPSFVAVLRDADLFVTTGLDLELWVPALLDRASNRKVSE
                     GGPGYVTAYTGITLLEVPTSLNRAQGDIHADGNPHIHTDPLNGILIARNILTGLTRVD
                     PADAAYFTGREQDFEKRVLEATMGAELVGVLTPATALNLLKTDKLFDFLGNTKFQGKP
                     LMEKLGGWLKTGEVFRGKDMVCYHKEWAYFSHRFQVNCAEFIEAKPGIPPTPRHVEDV
                     IALMKDKHIPVLFASNYFNRNQIQQVAEKTGATAVIVPENTAGAPGVDTYFDLMNTWV
                     NGLAAAYKKGAS"
     gene            complement(4955..>5773)
                     /locus_tag="VLD58_09565"
     CDS             complement(4955..>5773)
                     /locus_tag="VLD58_09565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54593.1"
                     /translation="NAKVIMTFSNEEVGIEEGYLWYTGLPGRVRADLGLFRQQVGDLN
                     RWHLHALPETEYPLVYQRYLGEEGLSGAGLSLYTTLPFSIAHGTHEVWVQGTTAASEP
                     LYGSGRHGTLLGRVQNFWQLSRSTYGQLGFTALGGDHGDTLKGRVLGADLRLTWRPPN
                     EGTRKNVTFRAEGYRFRGEDLGQVTTRYGMFADLVAQLSTRWILGTRYDYLESPRGVR
                     QTEWQITPTITWWESEFVYLRLEGRHHRLPDNSTDNQLVFQTVFAMGPHKHETY"
BASE COUNT          991 a         1868 c         2030 g          884 t
ORIGIN      
        1 gcaccgcgcc aaccggcgca tcagtggcct cgacgcagac ctcacgatcg agtggcaggt
       61 ggtcggagct gtaggagaag tgcaggcggg cagcagcggc ggtacggtcg agcgcgtcgc
      121 ggagggacag gcccgtcgcg acgagtgaca ccggccggtc cagcggtggc gcccagctct
      181 gggccaacgc ggtcatggat ggggcgcaac gctgctgagc gccgaggccc ggcgccagca
      241 ggagcagcag caaccccggc gcgagcaggg gtgacgcccg cgcacccatc cgcgtcactc
      301 gggtgagggc gcgctgctca ggttgagaac ggccgtatcg ccgcgctgct cgaccgaagc
      361 gccgagcgcg agggcgatga cccggagcac gcgtgccacc gagtcgccct ggaaggaggc
      421 ggtcacatgg cgggccgcca gcgtggaatc gcccagccgg agctcgagcc cgtaccagcg
      481 gcggagctcg gcctgcacct ggctcatcgg cgcatcgtgg aactcgagcg ttccatcgag
      541 ccagtcggga cgctccgacg atgcgagggg cgcacgggtc actgttccgc tctcggcgcg
      601 gccactgttc ccgcctgcga tgacgacgct ctggccactg gccgacttga ggctgacgga
      661 cccctcgaga acggccactt ccaccgcgcc gtcgtgcgtg ccccggacgg agaaaacggt
      721 gccaaggtcg gtgaccaccg cgtcgcccac acggacttca aaggggcggg ctggatcgtg
      781 ggccacctcg aaccaggctt ctccctcgag gcgaacctga tcggggcgca tccccgcccg
      841 gtgacgggcg accagccggc tccggggtgc gaggatcatg cgtccaccgt cgaagggaat
      901 gacctggggg acacccgcag gggcggaata ggcgagcatc ggtgggcggg cggcacgctg
      961 ccaggcccac aggccgccga tcacggcaag agcgaggaca gcggcaagcg cgagcagtgg
     1021 ctgccagcgg acgtgtggct ggagcggggt gacggcgtca gtctgaggca gccggcctgc
     1081 gacccgccgc caggcggcgt cgacatcgac cttcggcccg gtcagccggc cggccgactg
     1141 ctgcagcagc cgaaacgcgg cctcatcgtc gggagactgt gcgagccact gccgcagcgc
     1201 cgcctgctcc tcgggcgaag attcgcctgc gaggagacgg gccagggctt cagcgcggtc
     1261 ggtttcgggc tcgggcatgc aggaaagaca cctcagtgat ccaacaccct tatcgggtgg
     1321 tgagccatgc cgcaccatcg gccacccgca aatgagtacg tttgggccgg cgccgccgcc
     1381 agcccctgag cccgggcctt catgaccagt ccatcgcacc tggcggccct caaggccggg
     1441 gacagcgcag tcttcgagca gatcttccgg gagcactacg cccggctggt ctccatcggg
     1501 gaccggctgc tccgcgaccc ggccaggagc gaggacctgg cgcaggatgt cctgctcgaa
     1561 ctgtggcgag gccggagccg gctggatgat tcggtgcctg tgtccgccta cctctatcgc
     1621 gcggtgcgga accgggctct caacgagctc cggcaccgac gggtggtcag ggagaccgcg
     1681 ccgaggctcg ggtatcagga gcataccgcg cccgctgacc tctcctatga agaaaaggaa
     1741 caggatgcgg cggtgcggag ggcgattgcc gagttacctg aacgctgccg cgaagtcttc
     1801 gagttgagcc gggtcgatca actgagctac gccgagatcg ccgaggtgat ggggatcacg
     1861 atcaagaccg tggaagccca catggggaaa gcgcttcggg cgctccgggt ggcgcttggg
     1921 ccgtggttgc cggaggcgag ggggcgagta gggggatcca acggctgaag tgttctggaa
     1981 gtacgccggc cagcatcccc gtccgcgttg ccggccctat accctggaga tgatgatgcg
     2041 tcgttacctc accccgattg cagcagtcct ggtgcttggc ctcgcggcct gtcaggactc
     2101 gggttcgccg tcgaccagca gcgccctgac cgatgccttt gcgacggtgc ccctcggttt
     2161 tggtgaagtg cagagcacct tcccgaactc cgccgacagc ggtttgatca actggagtcc
     2221 cggcggccac cgcatgggtg gattccatga ccgcggtggg atgatgtgtg gcggagagcg
     2281 tggcttcctc aacttccccc tcctgttcgg cctggggcgt ggcttcttcc acggcgagtt
     2341 ctttggcacc tgcgccttca atgcgaccac cggccgagtg gaatgcgaca ccgtggtgcg
     2401 tcacggtctc agcgtggtgc gttccgccgc ctacaccgat gccggcggag cggtgcagga
     2461 gcacttcgac tcgctcacca acaccgtcaa cgtgaaggtc gatgtctccg gcaccttcac
     2521 ccggcacgac gacgacacca gcaccgttga gcatcacagc gaccggacgg tgaccggcct
     2581 ggcccggggc agcgccgcgc ggaccgtgag cggtacctcc gccggcaccg agaccaccac
     2641 cgggacggac agcaccggca gcttcacggc cgtgcgcacc gtgggcgaca cgatcaatga
     2701 cgtggtgctc ccggttccga ccgactcgac ccgcccgctc cccgcgagcg gcagcatcat
     2761 ccgggcgatg agcgcgacgg taacctactc cggccagtcg ccggtgacct cgagccgccg
     2821 cgaagtcatc accttcgatg gcagcagcac cgccaccgtg gtgatcacca aggacggcgt
     2881 gaccaagaac tgcacgctga gtctgccacg cggacatctg tcctgctcgt gagccgctga
     2941 gcgggtctca ccccacgaag aagggccggg agcatctgct cccggccctt tctcgtgccg
     3001 ccaaccggag gactcaggct gccgctggct tgagcaaccc ccggcggagc gcccacgtga
     3061 gcagcagccc caggccgaag acgcagacca ccaccgggcc ggtcggcagg tcgtaacgga
     3121 aggagatggc gatcccgatg gccgaggcca gcacgccggc cacccaggag atcagggcga
     3181 ggtagccgtg gcgccgggtg aactgaaagg cgatcgcggc cggcactacc aggaaggaga
     3241 agaccagcag gactcccacg atgggcaccg agaaggtgat cacgatgccg aaggagagat
     3301 agaaccagaa atcccacagc cggagcttcc acccttcgcg ctcggccgat tcggggtcga
     3361 acgaaatggt gaggaaccgg cggcgcagga tccagtggaa aaccccgact accacgtaga
     3421 ccgcggccag ccggccgatc gcgggccagc ccacccacag cagacttccc accaggatgt
     3481 ccttgatggc ctcgccgccg cgcggcgact tgtcggccac caggagcccc gccgcggacg
     3541 cgaccacgta cacgatgccg atgatcgcct cctgcggtac ccggccggcg ccatgcttgg
     3601 agcgggtcag cgcgaagagc gcggcaccga tggtagtgaa cgccagcgcg taggcgaagg
     3661 agcgggccga gtcaggctcg gcgccgagga agatcgcgac ggtgctgccg agggccgcga
     3721 cctgggccag cgacaggtcg acgaagatca cctcgcgggc gatgacgtgc accccgagat
     3781 aggaatggat cgccacgatc accatgcagg caaccagcgg cgcaagccag aggctgtgga
     3841 tgagctgatc catcaggaag cacccttctt gtaggcggcg gccagtccgt tcacccaggt
     3901 gttcatcagg tcgaagtagg tgtccacgcc gggcgcaccg gcggtgttct cgggaacgat
     3961 gacggcggtg gcgccggtct tctccgccac ctgctggatc tggttccggt tgaagtaatt
     4021 ggaggcgaag agcaccggga tgtgcttgtc cttcatgagg gcgatgacgt cctcgacgtg
     4081 ccggggcgtg ggcggaatcc ccggcttggc ctcgatgaac tcggcacagt tcacctggaa
     4141 gcggtggctg aagtacgccc actccttgtg gtagcagacc atgtccttgc cgcggaagac
     4201 ctcaccggtc ttgagccagc cacccagctt ttccatcagc ggcttgccct ggaacttggt
     4261 gttgccgagg aagtcgaaga gcttgtcggt cttgagcaga ttgagcgcgg tggcgggtgt
     4321 caggaccccc accagctcgg cgcccatcgt agcctccagc acccgcttct cgaaatcctg
     4381 ctcccggccc gtgaaatagg ccgcgtcggc tgggtcgacc cgggtgagcc cggtgaggat
     4441 gttgcgggcg atcaggatcc cgttcagggg atcggtgtga atgtggggat tgccgtcggc
     4501 gtgaatgtcg ccctgggccc ggttgagcga tgtcggcacc tcgagcaggg tgatgccggt
     4561 gtaggccgtg acgtagccgg ggccgccctc gctcaccttg cggttgctgg cgcggtcgag
     4621 gagcgccggc acccagagtt cgagatcgag gccggtagtg acgaagagat cggcgtcgcg
     4681 cagcaccgcc acgaagctgg gcttgggctg cacgaagtgg ggatcttcat cgccctgggc
     4741 gatggaggta acggtgccgc gatcgccgac gatctcgcgg gcgatggcgc cgtaggtggt
     4801 gaggctggtg acgaccttca ccgatgccgc gccatgcgcc ttgggaggat cggcggagag
     4861 cgcggcggcc agagtcaatg cggcgaggaa catgcgttca cctttcggat acgacgggct
     4921 agcgtctaat ggctaacggc caacggccga tgacctagta cgtctcgtgc ttgtgcggtc
     4981 ccatggcgaa gaccgtctgg aagaccagct gattgtcggt ggagttgtcc ggaagccgat
     5041 gatgccggcc ctccagacgg aggtatacga attcgctttc ccaccaggtg atggtcgggg
     5101 tgatctgcca ttcggtctgg cggaccccgc ggggcgactc gaggtagtcg tagcgggtcc
     5161 cgagaatcca gcgggtgctg agctgcgcca ccaggtcggc gaacatgccg tagcgggtgg
     5221 tgacctgtcc cagatcctct cctctgaagc gatatccctc ggcccggaag gtgacgttct
     5281 tccgggtgcc ttcgttgggc gggcgccagg tgagccggag gtcggcgccg aggaccctgc
     5341 ccttcagggt gtcgccgtga tcaccgccga gcgcggtgaa gccgagctgg ccgtaggtgc
     5401 tgcgggagag ctgccagaag ttctgtaccc gtccgagcag ggtgccgtgg cggccgctgc
     5461 catacaacgg ctcgctcgcc gccgtggtgc cctgcaccca gacctcgtgg gtgccgtgcg
     5521 cgatcgagaa tggcagcgtg gtgtagagcg agaggcccgc gccgctcagc ccttcttcgc
     5581 cgaggtagcg ctggtacacc agcgggtatt cggtctctgg cagggcgtgg agatgccagc
     5641 ggttgaggtc gcccacctgc tgccggaaca ggcccaggtc ggcccggacc cgtcccggga
     5701 ggccggtata ccagagatag ccttcctcga tgccgacctc ctcgttggag aaggtcatga
     5761 tgacctttgc gtt
//
LOCUS       DATIFF010000643         1170 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1466162, whole genome shotgun sequence.
ACCESSION   DATIFF010000643 DATIFF010000000
VERSION     DATIFF010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1466162"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1161)
                     /locus_tag="VLD58_09570"
     CDS             complement(<1..1161)
                     /locus_tag="VLD58_09570"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSB54594.1"
                     /translation="MIGVLPAGFGFPAGTDIWVPLEPTGPTSSRTAHNWSGVARLRPG
                     VTVAVADRELDTLTARMAAEFQPDFDGVGAIVTPLQELLTISSRRPLYLLLGASGLLL
                     LAACTNLASSMLARGLTRRQEVAVRIAIGAGRLRIVRQLFTEALLLALLGCGAGLLLA
                     AGLLRVFVHLAPAALQLTSVHLDGWVLVFTALVGMTTTVLIGLFPALRTSGAEPGLAL
                     REGGRSGTSRAERRIWNGLVIAEVALAATLLCGSGLMIRSLRRVLEVDPGFRPDKVLS
                     VSMSLPTAVYGDDASREQFWSRVLESVRQVPGVEVAGLTSALPLSGNNSSGSFGIEGV
                     PVGPAGYGPGNGGYRMVSEDYFGSMGIPLLQGRDFDRRDIAGGAPVVIINRTL"
BASE COUNT          206 a          421 c          389 g          154 t
ORIGIN      
        1 gagcgttcgg ttgatgatga ccaccggcgc gcctcccgcg atgtcgcgcc gatcgaagtc
       61 ccgtccctgc aagagcggaa tccccatgga tccgaagtag tcttcgctca ccatgcgata
      121 tcccccattg cccggcccgt atcccgcggg gccgaccggc acaccttcga tcccgaagct
      181 gccggaggag ttgttgccgc tcaacgggag cgcgctggtc aggcccgcca cttctactcc
      241 cggcacctgg cgcaccgact cgagcacgcg ggaccagaac tgctcccggc tggcgtcgtc
      301 gccatagacc gcggtgggga gactcatcga gacgctgagg accttatccg gccggaatcc
      361 aggatcgacc tcgagcaccc gccggagact ccggatcatg aggccgctgc cacacaggag
      421 ggttgcggcc agcgctacct cggcgatcac cagtccgttc cagatccgtc tctccgcccg
      481 gctggtgccg gagcggccgc cttcgcgcag ggccaggcca ggttccgccc cgctggtgcg
      541 cagcgccggg aagagaccga tgaggacggt agtagtcatc ccgacgagag ccgtgaagac
      601 cagcacccat ccatcgaggt gcaccgaggt tagctgaagc gcggcaggcg ccaggtggac
      661 aaagacccgg agaagccccg ccgccagcaa cagccccgct ccacacccca gcagcgccag
      721 caggagcgct tcggtgaaga gttggcgcac gatgcgcagc cggcctgcgc cgatggcgat
      781 ccgcaccgcc acttcctggc ggcgggtgag gccccgcgcc agcatcgagc tcgcgaggtt
      841 ggtgcaggcg gcgagcagca gcagacccga ggctcccagc agcagataca gcggccggcg
      901 cgaggagata gtcagcagtt cctgcaacgg ggtgacgatc gccccgacac cgtcgaagtc
      961 cggctggaac tcggctgcca tgcgggccgt gagggtgtcg agctcgcgat cggccaccgc
     1021 gacggttaca ccggggcgga gccgcgccac acccgaccag ttgtgcgccg tccggctcga
     1081 ggtcggcccg gtcggctcga gcggcaccca gatgtcggtc cccgccggga agccgaaccc
     1141 cgccggcagc acgccgatca cctgatagtc
//
LOCUS       DATIFF010000644         3286 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2234692, whole genome shotgun sequence.
ACCESSION   DATIFF010000644 DATIFF010000000
VERSION     DATIFF010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3286
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2234692"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            35..970
                     /locus_tag="VLD58_09575"
     CDS             35..970
                     /locus_tag="VLD58_09575"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HSB54595.1"
                     /translation="MLAFVLICVAVSAAFVILFVLEIAPGRDQLVAQRLSELQSSGRD
                     TPAVLQRRRRQDRTDRLKAVLQAFGEAVQERNSNVGAVRQRLIRAGYPNASAVPMYLG
                     SRVALPAALAIASMILLPTLGKSAAVTLIMTIYFGAMGYVLPSVVVGQRIKKRQKEMQ
                     KALPDALDMLVVSVEAGLGLNQALVRVSEEIDRISPVLSEQLGLVNLEIRAGTSREEA
                     LRNLADRTGLQDISSLVGMLIQTDRFGTSVAQALRVHADTMRTKRRQRAEEAAAKTTI
                     KLIFPLVFCIFPAMFVVILGPALIQIYHALAGFGG"
     gene            967..1329
                     /locus_tag="VLD58_09580"
     CDS             967..1329
                     /locus_tag="VLD58_09580"
                     /inference="COORDINATES: protein motif:HMM:NF014678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HSB54596.1"
                     /translation="MKYLRAANTARGSVLGTRIGLADRWWLRLRGLLGRSGVAPGEGL
                     LLRPCRAVHMRGMRFPLDVAFLDGAGAVVAAYHSLPPGAHTRWHRGARDALELPAGTL
                     AASATAVGDTIVCTEVEP"
     gene            1326..2687
                     /locus_tag="VLD58_09585"
     CDS             1326..2687
                     /locus_tag="VLD58_09585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54597.1"
                     /translation="MTLAPPSAAPYGRSEKAPDAKEPPVPETVRDTGLSEEFIVDLLI
                     KTLYVQGARTGSQLVASVRLPFAFVDDRLMSLQQRRLVEVLGTSGPNRGAYVFNLTGA
                     GRDRAREALASSQYVGPAPVPLPQYRTWVEKQTIRNVHVTREVVREGFRNMVLSEQVH
                     DVLGPSINSAKSLFLYGAPGNGKTMIAETISHMLGGDIFVPFAVEIEGQIMILYDPVY
                     HHAVEGIDPLEIVEDGAEPAWLKSPPSYDMRFVKVRRPVVLTGGELTLEQLDLQYDTY
                     TKMYQAPFQVKANGGVLILDDFGRQRVPPKDLLNRWIVPLEKRIDFLTLHTGGKFPVP
                     FDTLLIMATNLEPSHLVEEAFLRRIHYKIQIHGPDPDQYAEIFARCCEERGIPYVHDA
                     VVYIYQEYYGRQGIPPRACHPRDILDHLVDIARFYEGKPVLNNDIVDRACRSYFLDDS
                     RKE"
     gene            2684..>3286
                     /locus_tag="VLD58_09590"
     CDS             2684..>3286
                     /locus_tag="VLD58_09590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54598.1"
                     /translation="MTQSIDPTAAVAAQLRAEAALGHRLDVLERDNRRLRRYTTMMLV
                     VVALVLGLGAALVFYSGKAGLPGSPQTVTARQFVLRDGSGTVRGAWGTTEDGSVRISL
                     NDEKGRQRVRLSLLEDGSAGLSFADTADRKLAVLGLLPDHTTSLVLTDPGGIPRVVLG
                     VQPNGSSNIVFADQSGSTRAGLGVDPRGLGTFTLADRSAGS"
BASE COUNT          490 a         1185 c         1101 g          510 t
ORIGIN      
        1 cggaagatcg tggacatcga gatctgaggc tgccgtgctc gcattcgtcc tgatctgcgt
       61 cgcggtctcg gccgccttcg tgatcttgtt cgtcctggag atcgcgcccg ggcgcgacca
      121 gctcgtggcg cagcgcctct ccgagctgca gagctcgggg cgcgacacgc ccgcggttct
      181 ccagcggcgc cgtcggcagg accgcaccga ccggctcaag gcggtgctgc aggcgttcgg
      241 cgaggcggtc caggagcgga attcgaacgt cggcgccgtt cgccagcggc tgattcgcgc
      301 cgggtatccc aatgcgtcgg cggtgccgat gtatctgggc tcccgcgtcg cgttgcccgc
      361 ggcgctggcg atcgcgtcga tgatcctgct gccgacgctg gggaaatcgg ccgccgtcac
      421 cctgatcatg acgatctatt tcggggccat gggttatgtg ctcccgtcgg tggtcgtcgg
      481 ccagcggatc aagaagcgcc agaaggagat gcagaaggcc ctcccggatg cgctggacat
      541 gctggtcgtg agcgtcgagg ccggcctcgg cctcaatcag gcgctggtcc gcgtctccga
      601 ggaaatcgac cggatcagcc ccgttctcag cgagcagctc ggcctggtga acctggagat
      661 ccgggccggc acctcgcgcg aagaggcgct ccggaacctg gccgaccgca ccgggctgca
      721 ggacatcagc tcgttggtcg ggatgctgat ccagaccgac cggttcggca cctcggtggc
      781 ccaggcgctc cgcgtccatg ccgacacgat gcggaccaag cggcggcaac gggccgagga
      841 ggcggcggcc aagaccacga tcaagctgat cttcccgctg gtcttctgca tcttcccggc
      901 gatgttcgtc gtcattctcg ggccggccct gatccagatc taccacgcgc tggccgggtt
      961 cggggggtga agtacctccg ggccgccaac acggcccggg ggagcgtcct gggcaccagg
     1021 atcggcctgg ccgaccggtg gtggcttcgg ctccgcgggc tgctcggccg gagcggcgtg
     1081 gccccggggg aagggctgct gctccggccc tgccgggcgg tgcacatgcg agggatgcgg
     1141 ttccccctcg acgtggcgtt tctcgacggg gccggcgccg tggtggcggc ctatcactct
     1201 ctgccgcccg gcgcccatac tcgttggcac cggggcgcac gcgacgcgct ggagctgccc
     1261 gccgggaccc tcgcggccag cgcgacggcc gtcggagata ccatcgtctg cacggaggtt
     1321 gagccgtgac cctggccccc ccgagcgccg caccctacgg gcgcagcgag aaggcccctg
     1381 acgccaagga gccgccggtc cccgagacgg tgcgcgacac cgggctcagc gaggagttca
     1441 tcgtcgatct cctcatcaag accctctacg tgcagggtgc ccggaccggc tcccagctcg
     1501 tcgcctcggt ccggctcccc ttcgccttcg tggacgaccg gctgatgtcg ctccagcagc
     1561 gccggctggt cgaggtcctc ggcaccagcg gccccaaccg gggggcctac gttttcaacc
     1621 tcaccggggc cggccgcgac cgggcccgcg aggcgctcgc cagcagccag tacgtcggcc
     1681 ccgccccggt gccgctgccg cagtaccgca cctgggtcga gaagcagacc atccggaacg
     1741 tccacgtcac ccgcgaggtg gtgcgcgagg ggttccgcaa catggtgctc tccgagcagg
     1801 tgcacgacgt gctcggcccc tcgatcaact ccgccaagtc gctgttcctg tacggcgccc
     1861 ccggcaacgg caagaccatg atcgccgaga ccatctccca tatgctgggg ggcgacatct
     1921 tcgtcccctt cgcggtggag atcgagggtc agatcatgat tctgtacgac ccggtgtacc
     1981 accatgccgt cgaggggatc gacccgctgg agatcgtcga ggacggcgcc gagccggcct
     2041 ggctcaagtc gccgccgagc tacgacatgc ggttcgtgaa ggtgcggcgg ccggtggtgc
     2101 tcaccggcgg ggagctcacc ctggagcagc tcgatctcca gtacgacacc tacaccaaga
     2161 tgtaccaggc gccgttccag gtgaaagcca acggcggggt gctgatcctc gacgacttcg
     2221 gccgccaacg ggtgccgccc aaggacctgc tcaaccgctg gatcgtgccg ttggaaaagc
     2281 gcatcgactt cctgaccctg cacacaggcg ggaagttccc ggtgccattc gacaccctgc
     2341 tcatcatggc cacgaacctg gagccgtcgc acctggtaga ggaggccttc ctccgccgga
     2401 tccactacaa gattcagatc cacggccccg accccgacca gtacgccgag atcttcgccc
     2461 gctgctgcga ggagcggggg attccgtacg tccacgatgc cgtggtctac atctaccagg
     2521 aatactacgg ccgccagggt atcccacccc gtgcctgtca cccgcgcgac attctggacc
     2581 acctggtgga catcgcccgc ttctacgagg gcaagcccgt gctgaacaac gacatcgtgg
     2641 accgggcctg ccgctcctac ttcctggacg actcgaggaa agagtgaccc agtccatcga
     2701 ccccaccgcc gccgtcgccg cccagctccg ggccgaggcc gcgctgggcc accggctcga
     2761 cgtgctggag cgcgacaacc gccggctccg ccgctacacc accatgatgc tggtggtggt
     2821 ggcgctggtg ctcgggctgg gggcggcgct ggtgttctac tccggcaagg ccggcctccc
     2881 cggcagcccc cagacggtga cggcccggca gttcgtgctc cgcgacggca gcggcacggt
     2941 ccgcggcgct tggggcacca ccgaggacgg ctcggtgcgc atcagcctca acgacgagaa
     3001 ggggcgccag cgagtccggc tgagcctcct cgaggacggc tccgccggcc tcagcttcgc
     3061 cgataccgcc gaccggaagc tcgccgtgct gggcctgctc cccgaccaca ccaccagcct
     3121 ggtcctgacc gatccgggcg ggatcccccg ggtggtgctc ggggtccagc ccaacggctc
     3181 ctccaacatc gtcttcgccg accagagcgg ctccacccga gccggcctcg gcgtggaccc
     3241 ccgggggctg ggcaccttca ccctcgctga tcggagcgcc ggctcg
//
LOCUS       DATIFF010000645         1048 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1773121, whole genome shotgun sequence.
ACCESSION   DATIFF010000645 DATIFF010000000
VERSION     DATIFF010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1773121"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..955)
                     /locus_tag="VLD58_09595"
     CDS             complement(<1..955)
                     /locus_tag="VLD58_09595"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HSB54599.1"
                     /translation="MAKRWAKKIDSLSESMTVAVSDRARELQQRGVRVVNLGGGDPDF
                     DTPPHIVAAAVAAIDKGLTHYVASRGIPELRKAVAGKFQRDNRVAYDPDTEVIVTASG
                     KLALYITLAAMLEPGDEVLYFDPAWVSYEPMIRMLGGIPAAVPLRSADNFILDGDELK
                     KRVSPRTKAMILNTPNNPTGRVLTAEELDVVARSAREHGYWVLSDEIYEHIIYDRRRH
                     ISLASLPGMRELTVTLNGMSKAYAMTGWRLGYLGAPAPLCEQILKVQQHVVTCAPSFV
                     QAAGVAALQGPQGCVAEMTAEYDRRRRFMTDALNAIPGVRCP"
BASE COUNT          158 a          349 c          358 g          183 t
ORIGIN      
        1 gcgggcagcg tacgccgggg atcgcgttca gggcgtccgt catgaaccgg cgccggcggt
       61 cgtattccgc cgtcatttcg gccacgcagc cctgagggcc ctgcagcgcg gccacgccgg
      121 ccgcctggac gaaggagggg gcgcaggtga cgacgtgctg ctggaccttg aggatctgct
      181 cgcacagagg ggcgggggcc ccgaggtagc ccaggcgcca cccggtcatg gcgtaggcct
      241 tggacatgcc gttcaaggtc acggtgagct cccgcatccc cggcagcgag gcgaggctga
      301 tgtgccggcg ccggtcgtag atgatgtgct cgtagatctc gtcgctcagc acccagtagc
      361 cgtgctcccg ggccgagcgg gcgacgacgt cgagctcctc cgccgtcagg acgcggccgg
      421 tcgggttgtt gggcgtgttg aggatcatgg ccttggtccg cggcgagacc cgcttcttca
      481 gctcatcgcc atccagaatg aagttgtccg cagagcgcag ggggacggcc gccgggatcc
      541 cgcccagcat tcggatcatg ggttcatagc tcacccacgc cgggtcgaaa tagaggacct
      601 cgtctcccgg ctccagcatg gcggcgaggg tgatatacag cgcgagcttt ccgctggcgg
      661 tgacgatgac ctcggtgtcg gggtcatacg ccacgcggtt gtcgcgctgg aacttgcccg
      721 cgacggcctt tcgaagctcg gggatccccc ggctggcgac gtagtgggtg aggcccttgt
      781 cgatcgcggc gaccgcggcc gcgacaatgt gcggcggcgt gtcgaagtcc gggtcgccgc
      841 cccccaggtt gaccacccgg acgccccttt gctgcagctc gcgcgcccgg tcggaaacgg
      901 ccacggtcat cgactcgctc aaggaatcta tcttcttcgc ccagcgtttc gccatcggtc
      961 tcacctcgtg tcgggttaat gaagcactcc tgatccccgc cgcttttttc tcccggcgag
     1021 atcacccaca ggaacgacgg atacacca
//
LOCUS       DATIFF010000646         1089 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_696793, whole genome shotgun sequence.
ACCESSION   DATIFF010000646 DATIFF010000000
VERSION     DATIFF010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_696793"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..947)
                     /locus_tag="VLD58_09600"
     CDS             complement(<1..947)
                     /locus_tag="VLD58_09600"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54600.1"
                     /translation="MYFAFVLGIGWVLRRYVRSSEDFFLSGRSIPTWIAGLAFLSANL
                     GAQEVIGMAASGAKYGMMTSHFYWVGAIPAMVFVGVFMMPFYYGSRARSVPEYLRLRF
                     DEKTRGLNAVTFAVMTVFSSGISMYALAKLLELVLGWNFHTSVVLSALIVLVYIFLGG
                     LTSAIYNEVLQFFLIVLGFLPLVLLGLKDTGGWSGLKEKLVPVATGAGYAPGAWTDSW
                     RHLGSASANPMGVEWFGMVMGLGFVLSFGYWCTDFLVVQRAMAAESMLAARRTPLLAA
                     IPKMLFPALVILPGMIAIALHTTRGGLLPLGSDGAPNYNL"
BASE COUNT          214 a          351 c          383 g          141 t
ORIGIN      
        1 aggttgtagt tgggcgcgcc gtcgctcccg agcgggagca ggccgccgcg ggtggtgtgc
       61 agcgcgatgg cgatcatccc cggcaggatg accagggcgg ggaagagcat cttcggaatg
      121 gccgcgagca gcggcgtgcg gcgggccgcc agcatcgatt cggcggccat ggcgcgctgc
      181 accaccagga agtcggtgca ccagtagccg aacgagagca cgaacccgag gcccatcacc
      241 atgccgaacc attcgacgcc catcgggttg gcgctcgccg aaccgaggtg gcgccacgaa
      301 tcggtccagg caccgggggc gtagcccgcg ccggtcgcca ccggcaccag cttttccttg
      361 agtccgctcc atccgccggt gtccttgagc ccgagcagca ccaggggcag gaaccccagc
      421 acgatcagga agaactgcag cacctcgttg tagatcgccg aggtgagccc gccgaggaag
      481 atgtagacca gcacgatgag ggccgagagc acgacgctgg tgtggaagtt ccagccgagc
      541 accagctcga gcagcttggc cagggcgtac atcgagatgc cggaggagaa cacggtcatc
      601 accgcgaagg tgacggcatt caggccacgg gtcttctcgt cgaaccggag ccggagatat
      661 tccgggaccg agcgcgcccg ggagccgtag tagaacggca tcatgaacac gcccacgaac
      721 accatggccg ggatggcgcc cacccagtag aagtggctgg tcatcatccc gtacttggcg
      781 cccgaggcgg ccatgccgat cacttcctgg gcgccgaggt tggcggacag gaacgccagt
      841 ccggcgatcc atgtcgggat ggagcgcccg gaaaggaaga agtcctcgct gctgcgcacg
      901 taccggcgca gcacccagcc gatgccgagc acaaaggcga agtacacgat caggatggcg
      961 tagtcgatcg cgccgaggtg gacctggggc aggaatgcgc tccgctgagg gtgactcggc
     1021 gctcaagttg ggcgccggcc cgggcggcgt caatccgccc agaagcgagt gcccggtccc
     1081 gccaccgcg
//
LOCUS       DATIFF010000647         5629 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1619169, whole genome shotgun sequence.
ACCESSION   DATIFF010000647 DATIFF010000000
VERSION     DATIFF010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5629
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1619169"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..302
                     /locus_tag="VLD58_09605"
     CDS             <1..302
                     /locus_tag="VLD58_09605"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024914.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB54601.1"
                     /translation="MACGCPVVASETGACPEITAGAGLLANPYRAEDFAGKILRVLED
                     GGLRHELRERGLQRAAFFRWDRSARAVLQKMREIVEQASGVAESARSRSRFALRH"
     gene            580..1413
                     /locus_tag="VLD58_09610"
     CDS             580..1413
                     /locus_tag="VLD58_09610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloprotease HtpX"
                     /protein_id="HSB54602.1"
                     /translation="MNNVKTFVLMAGLMGLFLMAGQLLGGSQGLMVALVFGSFFNFIM
                     YFFSDRLVLRMYGAQLVGPGQAPELYAIIDRLRQRAGLPMPKVAVASHEQPNAFATGR
                     NPEHAVVAVTTGILKYMPQEELEGVLAHELAHVKSRDMLISTIAAGIAGAISNLPYLL
                     MFGGRDNEPAHPGAQLALVLLGPIGAMLIQFGISRQREFEADRVGAQILGRPLPLANA
                     LRRLDALAHRIPMDVAPAVAPLAQVNPLAASGGGLLKLFSTHPPIEERLARLEAMAAG
                     R"
     gene            1414..2346
                     /locus_tag="VLD58_09615"
     CDS             1414..2346
                     /locus_tag="VLD58_09615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002640542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HSB54603.1"
                     /translation="MGQHQPAVWLGFSALVVALLALDLGVLNRRAHTLGFREALRWSA
                     SVVALALLFGGFVFWQEGGQSALEYYTGYLVELSLSVDNLFVFILIFAYFGVPPEAQP
                     KVLKWGILGAIVMRFVMIALGALLLQRFEWIIWVFGAILIVTGIRVWRQEGEQIEPEK
                     NPVARLARRVLPFSSGYDGTRFVTRAADGRVLATPLLLVLLLVEWSDLVFAIDSIPAV
                     FAVTRDPFLVFSSNVFAILGLRALFFVVAGAMDRFTYLKPGVALILVFVGCKMALSHW
                     VHLPIGISLAVIVGTLGGAVGLSLWRSGTPRTAG"
     gene            complement(2351..2893)
                     /locus_tag="VLD58_09620"
     CDS             complement(2351..2893)
                     /locus_tag="VLD58_09620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54604.1"
                     /translation="MHRIAFVGMLAVLSLLPALPGHAQATPSSSDLVPGSRIRVSTGV
                     PSRMTGTLVDIGGDSLRLVVGKRDTLGVPLSAVTRLEESRGRRANYTKGALIGGGIGL
                     ALGLGVGALADGLRNIGCESPSCDNPSQLGGALAIGGLAGAGVGAGVGALLAGVFQRE
                     RWQPVVRPSGALQVGVRLRF"
     gene            3112..4461
                     /locus_tag="VLD58_09625"
     CDS             3112..4461
                     /locus_tag="VLD58_09625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSB54605.1"
                     /translation="MLIPRLLHRLGLHRPELRAWAMYDWAMSAVQVGIVTAIFPIYFV
                     KVAGAGLAESKATQHLATANTAALAFVAVLSPVLGAVADYAAAKKRFLAGFMLLGIAA
                     IAGMFFIHTGDILLASVLFVLALIGATGSFVFYESLLPHIAAPEEVDRVSTAGYALGY
                     IGGGVLLALNLAWIQRPAWFGLPSGPGLSEAAATLPVRLAFVSVAVWWLVFAIPLFRR
                     VPEPPRRLETGEQKGENPARVAFLRLAETFRELRGFRQASLFLLAFLIYNDGIQTIIK
                     MATAYGTELGIGQGALITAILLVQFVGIPFSFLFGLLAGRIGAKRAVFLGLFAYTVIS
                     VLGYFMRTATHFFVLALLVGMVQGGTQALSRSLFARMTPPHKSGEFFGFFSVFEKFAG
                     IFGPLFFALAIALTGSSRVAILSVIAFFAVGAALLTVVNVTEGERAAREAERSIGGV"
     gene            4744..>5629
                     /locus_tag="VLD58_09630"
     CDS             4744..>5629
                     /locus_tag="VLD58_09630"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HSB54606.1"
                     /translation="MDPIELTRALVARESPTFAEAPATDYVAGVLQRVGWQVTRQAVT
                     PGRDNLYAYREPPVVVYSTHLDCVPPYVPFREDDEWLRGRGVCDAKGIAAAMVAAAER
                     LAQRGERRIGLLFVVGEENGSDGALAAAALQPKGRFLINGEPTENRLSIGQKGSLRLD
                     LEAEGQAAHSAYPEEGRSAIIPLLDTLERIRHLPLPSDPLLGPSTLNIGTIHGGVAPN
                     VIPPSARAQIHFRTVGPTAALKDAVAQALAPGVVITGEVELPAFKSAAPAGWDTTFVA
                     FASDLPFLGSWGRGYQLGP"
BASE COUNT          759 a         1974 c         1923 g          973 t
ORIGIN      
        1 ccatggcctg cgggtgcccg gtcgtggcct ccgagaccgg cgcctgtccg gagatcaccg
       61 ccggagccgg cctgctggcg aatccctacc gggccgagga cttcgcgggc aagatcctcc
      121 gcgtgctgga ggacggcggt cttaggcacg agctgcgtga gcgcggcctc cagcgggcgg
      181 ccttcttccg gtgggaccgc tcagcacggg cggtgctgca aaagatgcgc gagatcgtcg
      241 agcaggccag cggcgttgca gagtccgccc gctcccgttc gcgctttgcg ctccgacact
      301 gaggtgccgc gcggcgcctt cctggtgcca tcctccggca cgactcctca ccccgccgtt
      361 gacgccgcgc ttgcgcggtc ctagattccg cgccgtagaa ggggagtagc tcatccgcct
      421 cgcggcggac gcccggatcg tcaagactgt ccgcacggcg ggcacggtcc cggcaggaag
      481 cgtgggtggt agcccgcgta ttcagagcga gaccttcgtc aaagctgccg ctggggcagc
      541 ggacgaaggt ctcgctttcg tctttgggag ggaccgacga tgaacaacgt caagacgttc
      601 gtgctgatgg ccggcctgat ggggctcttc ctgatggccg gccagctgct gggcggatca
      661 cagggcctga tggtggccct cgtcttcggc agcttcttca acttcatcat gtacttcttc
      721 tccgaccgcc tcgtcctgcg catgtacggc gcgcagctcg tcggtccggg gcaggcgccc
      781 gagctgtacg ccatcataga ccggctgcgc cagcgggcgg ggcttccgat gcccaaggtg
      841 gcggtggcgt cccatgagca gccgaacgcc ttcgccacag gacgcaaccc ggagcacgcg
      901 gtggtggcgg tgacgaccgg catcctcaag tacatgcccc aggaggagct ggaaggcgtc
      961 ctcgcgcacg agctcgccca cgtcaagagc cgcgatatgc tgatctcgac catcgcggcg
     1021 gggatcgccg gcgcgatctc gaatctgccc tacctgctga tgttcggtgg ccgggacaac
     1081 gagcccgccc accccggcgc ccagctggcg ctggtcctgc tcggccctat cggggcgatg
     1141 ctgatccagt tcggcatctc gcggcagcgc gagttcgagg cggaccgggt aggggcgcag
     1201 atcctggggc ggccactgcc cctggccaac gctctccgcc ggctggacgc gctggcgcac
     1261 cggatcccga tggacgtcgc gccggcggtc gcgccgctcg cgcaggtgaa cccgctggcg
     1321 gccagcggcg gcggtctgct gaagctgttc agcacccacc ccccgatcga ggagcgactc
     1381 gcccggctcg aggcaatggc ggcggggcgc tagttgggcc agcaccagcc ggcggtctgg
     1441 ctgggcttct ccgccctggt tgtggcgctc ctggcccttg acctgggtgt cctcaaccgg
     1501 cgcgcccaca cgctcggctt ccgggaagcg ctccggtgga gcgccagcgt cgtggccctt
     1561 gcccttctct tcgggggctt cgtcttctgg caggagggcg gccagtcggc cctggagtac
     1621 tacacgggct atctggtaga gctgtcgctc agcgtcgaca acctcttcgt cttcatcctg
     1681 atcttcgcct acttcggcgt gccgcccgag gcgcagccga aggtgctgaa gtggggcatc
     1741 ctgggcgcga tcgtgatgcg attcgtcatg atcgcccttg gcgccctgct gctccagcgc
     1801 ttcgaatgga tcatctgggt gttcggggcc attctcatcg tcactggcat ccgggtctgg
     1861 cggcaggagg gcgagcagat cgaaccggag aagaacccgg tcgcgcggct cgcccggcga
     1921 gtgctgccgt tctcgtccgg ctatgacggg acgcgcttcg tcacccgggc ggcggacggc
     1981 cgggtgctcg cgacgccgtt gctcctggtg ctgctgctgg tcgaatggtc cgatctggtc
     2041 ttcgcaatcg acagcattcc cgccgtgttt gcggtcaccc gcgatccgtt cctggtcttc
     2101 agctccaacg tcttcgcgat cctcgggctg cgcgcgttgt tcttcgtggt agcgggcgcg
     2161 atggaccggt tcacctatct caagcccggc gtggcgctca tcctggtgtt cgtcggctgc
     2221 aagatggcct tgagccactg ggtccacctg ccgatcggga tctcgctcgc cgtcatcgtg
     2281 ggcacgctgg gcggcgccgt ggggctctcg ctctggcgga gcggcactcc ccgcaccgcg
     2341 ggttgacccg tcagaatcgc aggcgcacgc cgacctgcag cgccccgctc gggcgcacga
     2401 ccggctgcca ccgctccctc tgaaacacgc cggccaacag ggctcccacc ccggcgccga
     2461 ctcccgctcc cgccagacct ccgatcgcca aggctccccc caactggctg gggttgtcgc
     2521 acgagggcga ttcacagccg atgttgcgca acccgtctgc gagggccccg accccgagcc
     2581 ccagcgccag cccgatcccc ccgccgatca gcgctccctt cgtgtagttc gcccggcgtc
     2641 cccggctctc ctccagccgc gtaacggcgg agagcggcac gcccagcgta tcccgcttgc
     2701 cgaccactag ccgcagtgaa tcgccgccga tgtcgaccaa cgtgccggtc atccgggagg
     2761 ggacgcccgt gctgacccgg atccgtgagc ctggcaccaa gtcggaggag gacggggtcg
     2821 cctgcgcgtg gccgggcagc gcgggcagca gcgagaggac ggcgagcatt cccacgaacg
     2881 cgatgcgatg catggcgggc ctccgggact cgggtcgctt ggaacttggc gacacagcgt
     2941 caggtggcag tcaagcgact tcagggcgcc cccgaaagtc ggggagcttc gggtcggtcg
     3001 ccagtaatgc atcgtggtaa tggttcacat tgagacgtca tgtgggtcgc cgccgaaccg
     3061 accctccgcg gcctaccgcc gaccggccgg acgcgccacc cttcagccct catgctcatc
     3121 ccgcgtctgc tccaccggct cgggcttcac cggcccgagc tccgcgcctg ggccatgtac
     3181 gactgggcca tgtccgccgt gcaggtcggc atcgtcaccg cgatcttccc gatctacttt
     3241 gtgaaggtgg ccggcgcggg actggccgag agcaaggcga cacagcacct ggcgaccgcg
     3301 aacacggcgg cgctcgcctt cgtggccgtg ctctcgcccg tcctcggcgc cgtagccgac
     3361 tacgccgcgg cgaagaagcg atttctcgcc gggttcatgc tcctgggaat cgctgcgatc
     3421 gccgggatgt tcttcatcca cacgggcgac atcctgctgg cgtccgtcct gttcgtgctg
     3481 gccctcatcg gggcgaccgg cagcttcgtg ttctacgagt cgctgctgcc ccacatcgct
     3541 gcgccggagg aagtggaccg cgtctccacg gcggggtacg ctctgggcta cataggcggt
     3601 ggcgtgctgc tcgcgctcaa tctcgcgtgg atccagcggc cggcctggtt cgggctcccg
     3661 agcggccccg ggctgtcgga ggcggccgcc acgctgcccg tacggctcgc gttcgtctcg
     3721 gtggcggtgt ggtggctcgt gtttgccatc ccgctgttcc gacgcgtgcc cgagccaccc
     3781 cgacggctcg agacgggcga gcagaagggc gagaacccgg cccgggtcgc ctttctgcgg
     3841 ctcgcggaga cgtttcgcga gctcaggggt ttccggcaag catccctgtt tctgctggcc
     3901 ttcctgatct acaacgacgg gatccagacc atcatcaaga tggccaccgc atacggcacc
     3961 gagctgggga tcgggcaagg cgccctgatc accgcgatcc tgctggtgca gttcgtgggg
     4021 atccccttct cgtttctctt tggcctgctg gcgggccgca tcggcgccaa gcgcgcagtg
     4081 tttctcgggc tcttcgccta tacggtcatc agcgtgctgg gatactttat gcgcacggca
     4141 acgcacttct tcgtgctggc gctgctggtc ggcatggttc agggcgggac gcaggcgctg
     4201 agccgctcgc ttttcgcccg gatgacgccg ccccacaagt caggcgagtt cttcgggttc
     4261 tttagcgtct tcgagaagtt cgcggggatc ttcgggcccc tgttctttgc cttggccatc
     4321 gcgctcaccg gctcgagccg cgtagcgatt ctgtcggtga tcgcgttctt cgcggtgggc
     4381 gccgcgctgc tcacggttgt gaacgtgacc gagggcgagc gggccgcgcg ggaggcggag
     4441 cgcagtatcg gtggggtcta gccaaacacg ctgcgggggc cgacggccgg gccgttgtga
     4501 tgcccactgg ccttgcccgg gcctagtgcc cggcctaggt tacgcgaccg tatgttccac
     4561 gagacctcgc cttcctgtcg aaccaccatg ccccggaccc cgggccgcat cgcattcaag
     4621 tgcgggcgga cggggctcaa gcgtgtgcgc gggcattgga gcgcgcgcgg tctggcatag
     4681 ggtcgtgggt cacccccgca ccggaagccc cgccgcgcga aagcccggcg gggttgtttg
     4741 ctcatggatc cgatcgagct gacccgcgcc ctcgtggcgc gggagtcccc caccttcgcg
     4801 gaggcgcccg cgaccgacta cgtcgccgga gtgctgcagc gcgtgggctg gcaggtgaca
     4861 cggcaggccg tgacgcccgg tcgggacaac ctgtacgcct accgggagcc ccccgtcgtc
     4921 gtgtactcca cccacctgga ttgcgtgccg ccgtacgtgc cgttcaggga ggacgacgaa
     4981 tggctgcgcg gccggggcgt ctgcgacgcc aaggggatcg ccgccgcgat ggtcgcggcg
     5041 gcggagcgcc tcgcgcagcg cggggagcga cggatcgggc ttctcttcgt cgtgggcgag
     5101 gagaacggct cggacggcgc gctggcggcg gccgcgctcc agcccaaggg ccgcttcctc
     5161 atcaacggcg agcccaccga gaaccggctc tccatcggac agaagggctc gctccggctg
     5221 gacctcgagg cggagggcca ggctgcccac tccgcctatc ccgaagaagg ccggtccgcc
     5281 atcatccccc tgctcgacac cctcgagcgc atccggcacc ttccgttgcc gagcgatccc
     5341 ctgctgggtc cctctacgct caacatcggt acgatccacg gcggcgtcgc gcccaacgtc
     5401 atccctccga gcgcccgcgc gcagatacac ttccggacgg tgggaccgac agccgcgctc
     5461 aaggacgcag tggcccaggc gctcgcgccg ggcgtggtga tcacgggaga ggtagagctg
     5521 ccggcgttca agagcgcggc gccggcgggc tgggacacga ccttcgtggc cttcgccagc
     5581 gatcttccgt ttctgggctc ctggggccgc ggctaccagc tcggacccg
//
LOCUS       DATIFF010000648         1404 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1312692, whole genome shotgun sequence.
ACCESSION   DATIFF010000648 DATIFF010000000
VERSION     DATIFF010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1404
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1312692"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1404
                     /locus_tag="VLD58_09635"
     CDS             <1..>1404
                     /locus_tag="VLD58_09635"
                     /inference="COORDINATES: protein motif:HMM:NF013974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HSB54607.1"
                     /translation="PTWYTIRASKDGWIGRKKEIDLLVAMNAETAREDVLSLRPGSAV
                     VFDEPLQLGAVRSDLAFYPVPFDKVIQPVTGDAKLKKLLKNMAYVGVVAQLLGLELGE
                     VDSAIAKQFRKKAKAAELNVRAARAGFDFAKASLERKDPFQIRRMDANRGKMIIDGNS
                     AAALGAMFGGVTVVTWYPITPSSSLVETLIGYMRRYRMGADGKSTFAIVQAEDELAAV
                     GMVVGAGWAGARAMTATAGPGISLMSEFAGLAYFAEIPAVIWDVQRVGPSTGLPTRTS
                     QGDVLSTAFLSHGDTRHILLFPGSVEECFRFGVEAFDIAERFQTPVFVLSDLDLGMNY
                     WMSEAFTYPEKPISRGKVLSKEDLERLGGFERYRDVDGDGVPYRTLPGTDHPAAAYFT
                     RGTGHNEKAQYSERPDDWVSNLDRLERKMETARKELPAPILDGSGAEVGIIGYGSSHH
                     ALVESRDQLMQETGIRTD"
BASE COUNT          223 a          461 c          509 g          211 t
ORIGIN      
        1 cccacctggt acaccatccg cgcgagcaag gacgggtgga tcggccggaa gaaggagatc
       61 gatctcctgg tggcgatgaa cgccgagacg gcacgggagg acgtcctgtc gctccggccc
      121 ggctcggcgg tggtgttcga cgagccgctg cagctcggcg ccgtgcgctc cgacctggcg
      181 ttctaccccg tgccgttcga caaggtgatc cagccggtca ccggcgacgc caagctgaag
      241 aagctcctga agaacatggc ctacgtcggg gtggtggccc agctgctcgg tctggagttg
      301 ggcgaggtcg actcggcgat cgccaagcag ttccggaaga aggccaaggc ggcggagctg
      361 aacgtgcgcg cggcccgggc cggcttcgac ttcgcgaagg cgtcgctgga gaggaaggac
      421 cccttccaga tccgccggat ggacgccaac cgggggaaga tgatcatcga cgggaactcg
      481 gccgcggccc tcggcgcgat gttcggcggg gtgacggtgg tgacctggta ccccatcact
      541 ccgtcctcgt cgctggtgga gacgctcatc gggtacatgc gtcgctaccg gatgggggcc
      601 gacggcaaga gcaccttcgc catcgtccag gccgaagacg agctggccgc ggtgggcatg
      661 gtggtgggtg ccggctgggc gggggcgcgg gcgatgaccg ccaccgccgg cccgggcatc
      721 tcgctcatgt ccgagttcgc cggcctggcg tacttcgcgg agatccccgc ggtcatctgg
      781 gacgtgcagc gggtggggcc gtcgaccggg ctccccaccc ggacctcgca gggcgacgtg
      841 ctctccaccg ccttcctctc gcacggggac acgcggcaca tcctgctctt ccccggctcg
      901 gtggaggagt gcttccgctt cggggtggag gcgttcgaca tcgccgagcg attccagacg
      961 ccggtgttcg tgctctccga cctcgacctg ggcatgaact actggatgtc cgaggcgttc
     1021 acctacccgg agaagccgat ctcccggggc aaggtgctct ccaaggagga tctggagcgg
     1081 ctgggcggct tcgagcgcta tcgcgacgtg gacggcgacg gggttcccta ccggaccctg
     1141 ccggggaccg accatcccgc ggccgcctac ttcacccgcg gaaccggaca caacgagaag
     1201 gcgcagtact ccgagcgtcc ggacgactgg gtgagcaacc tggaccggct ggagcggaag
     1261 atggagaccg cccggaagga gctcccggcg ccgatcctgg acgggtcggg cgccgaggtc
     1321 ggcatcatcg gctacggctc gagccatcac gcgctcgtcg agtcccgcga ccagctgatg
     1381 caggagacgg gcatccggac cgat
//
LOCUS       DATIFF010000649         2985 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_850086, whole genome shotgun sequence.
ACCESSION   DATIFF010000649 DATIFF010000000
VERSION     DATIFF010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2985)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2985)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2985
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_850086"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1170)
                     /locus_tag="VLD58_09640"
     CDS             complement(<1..1170)
                     /locus_tag="VLD58_09640"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB54608.1"
                     /translation="MSEIQDRLQQALAARYTIQRELGRGGMATVYLATDLKHEREVAI
                     KVLHPELAATIGPERFDREIRIAAKLQHPNILGLFDSGEANGLLYYVMPFIFGESLRD
                     RLNREHMLPVDVAVHIALEVADALGYAHSLGIVHRDIKPENIMISGGHALVADFGIAR
                     AATGAAGSAKLTETGMAVGTPLYMSPEQAVGEQVGPTADLYSLACVLYEMLTGHPPFT
                     GSNARQIMARHAMDAVPSIQVVRDTVPDQVEDAVMAALNKVVADRPQTAAQFSEMLGA
                     PAGATAARYTASRAVPRRSVARMAPEGAVTLTMKKRSLVGVGISAIAGLLVAGGLISW
                     LLIRPRDGSAVTTGGINPHNIAVLYFKDESSRQTLGLLADGLTENLIGALGSVQGL"
     gene            1314..1988
                     /locus_tag="VLD58_09645"
     CDS             1314..1988
                     /locus_tag="VLD58_09645"
                     /inference="COORDINATES: protein motif:HMM:NF042734.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta family hydrolase"
                     /protein_id="HSB54609.1"
                     /translation="MSIPEEILTIPVDGETVSGLLLRPSGANALLVLGHGAGAGMRHP
                     FMEAVSHRLAGRGVATLRYQFPYMEKRLGRPDSPAVATATVRAACELARARAGDLPLL
                     AGGKSFGGRMTSTAQSEAPLPGVRGLVFLGFPLHAPKRPAIGRGEHLDRVTIPMLFLQ
                     GTRDDLADLGLIREVTGRLGPRVALHIVEGADHSFGVLKRSGRTGDEVLDELAGATAE
                     WFAGLP"
     gene            1992..>2985
                     /locus_tag="VLD58_09650"
     CDS             1992..>2985
                     /locus_tag="VLD58_09650"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HSB54610.1"
                     /translation="MSSPPVERPLDSPGTHRDGSIVPTARQREAIEAALGPVLVLSGP
                     GAGKTFCLISRIQYLVDRLDFDPARICAVTFTNKAAGEIASRLRGTLGDRASVVTRST
                     IHALCVQLLRRHGGAIGIPEAFGIADEEYQLQALRRAGFRKDQSWPLRQFSRHRIQGV
                     PLEDRFGQIYERYREILRGRGLLDFDDLVLGTEQLLRTHEQIANEIAGQWDYLLVDEF
                     QDLNQPQYAILRRLAAGHRNLFAVGDDEQAIYAWAGADLQVIQDFVNHFEITRKEIVL
                     DENRRCSRQIFETARRLVDHNPRLWSKDLRATREGEFPVAVERFADEFAEARWII"
BASE COUNT          451 a          993 c         1046 g          495 t
ORIGIN      
        1 gaggccctgc accgagccga gggcgccgat gaggttttcg gtgaggccgt cggccagcag
       61 ccccagggtc tgcctggagc tctcatcctt gaagtagagg accgcgatgt tgtgcgggtt
      121 gatgccgccg gtggtgaccg ccgagccgtc cctggggcgt atgagcaacc aggagatgag
      181 cccgccggcc accagcaggc ccgcgattgc ggagatgccg actcccacca gcgaccgctt
      241 cttcatggtg agcgtgacgg cgccttcggg cgccatccgg gcgacggatc ggcggggcac
      301 ggcgcgcgac gcggtgtagc gcgcggcggt ggcgcctgcg ggcgcgccca gcatttcgct
      361 gaactgcgcc gcggtctggg gccggtcggc cacgaccttg ttgagcgcgg ccatgaccgc
      421 gtcttccacc tggtcgggca cggtgtcgcg caccacctgg atgctgggca ccgcatccat
      481 ggcgtggcgc gccatgatct ggcgggcgtt gctgccggtg aagggcggat ggccggtcag
      541 catctcgtac agcacgcacg cgaggctgta gaggtcggcc gtcgggccga cctgctcgcc
      601 caccgcctgc tccggactca tgtagagcgg cgtgccgacc gccatgccgg tctcggtcag
      661 cttggccgag ccagcggcgc cggtcgcggc ccgggcgata ccgaaatcgg cgaccagcgc
      721 gtgcccgccc gagatcatga tgttctcggg cttgatgtcg cgatggacga tgcccagact
      781 gtgggcgtag cccagcgcgt cggccacctc gagcgcgatg tgcaccgcca catccaccgg
      841 cagcatgtgc tcccggttga gccggtcgcg cagcgattcg ccgaagatga acggcatgac
      901 gtagtagagc agcccattgg cctcgcccga gtcgaacagg ccgaggatgt tgggatgctg
      961 cagcttggcg gcgatgcgga tttcgcggtc gaaccgttcc ggcccgatgg tggccgccag
     1021 ctcggggtga agcaccttga tggcgacctc gcgttcatgc ttgaggtcgg tggcgagata
     1081 gaccgtggcc atgccacccc gccccagctc gcgctggatg gtgtagcgtg cggccaatgc
     1141 ctgctgcaaa cggtcctgaa tctcggacac ggggctcgac agtgggagcg gaggtacgga
     1201 tgtatgctga gaggagttga attatatgga gggaaggcag gtcaggtaag acggagcccc
     1261 ggcctttcga atctcctctg gcgccaggcg aatcgaggag acagccttca atcgtgagca
     1321 ttcccgaaga gatcctcacc atcccggtag acggcgagac cgtctccggc cttctcctcc
     1381 ggccatccgg ggcgaacgcc ctgctcgtcc tggggcacgg ggccggagcc ggcatgcgcc
     1441 atccgttcat ggaggccgtg agtcaccggc ttgcgggacg gggcgttgcc acgctccgct
     1501 accagttccc ctatatggaa aagcggctgg gccgtcccga ctcgccggcg gtggccaccg
     1561 ccacggtccg ggcggcctgt gaactggctc gggcaagggc gggagatctc ccgctcctcg
     1621 ccggcgggaa gtcgttcggc gggcgtatga cctccaccgc gcaatcggag gcgccgctcc
     1681 ccggggtgcg gggcctcgtc ttccttggct ttccgctcca tgctcccaag cggcccgcca
     1741 tcgggcgggg ggagcacctc gaccgggtca cgatcccgat gctcttcctt cagggtaccc
     1801 gggacgacct cgccgacctg gggttgatcc gggaagtgac cggacggctg ggcccgcgcg
     1861 tcgccctcca cattgtggaa ggcgccgatc attcgttcgg tgtcctcaag cgctccggcc
     1921 gcaccggtga cgaggtgctg gacgagctgg ccggcgcaac ggcggagtgg tttgccggtt
     1981 taccttaagc cgtgtcctcc ccaccggtag aacgcccgct cgattccccc ggcacccacc
     2041 gggatggttc gatcgttccc accgcccgcc agcgtgaggc gatcgaggcc gcgctgggtc
     2101 cggtgctggt gctctccggt ccgggcgccg gaaagacctt ctgcctcatc tcccgcatcc
     2161 agtacctggt cgaccggctg gacttcgatc cggcgcggat ctgcgccgtc accttcacca
     2221 acaaggcggc aggagagatc gcgagccggc tccgcggcac cctgggcgac cgggcctcgg
     2281 tggtcacccg gtcgaccatt cacgcgctgt gcgtgcagct gctcaggaga cacggcggcg
     2341 ccatcgggat cccggaggcc ttcggcattg ccgatgagga gtatcagctc caggcgctcc
     2401 ggcgggcggg gttccgcaag gaccagagct ggcccctccg gcagttcagc cggcaccgga
     2461 tccagggtgt cccgctggag gaccgtttcg ggcagatcta cgagcggtac cgcgagattc
     2521 tccgggggcg cgggctgctc gacttcgacg acctggtgct cggcaccgag cagctgctcc
     2581 gcacccacga gcagatcgcc aacgagatcg cggggcagtg ggactatctc ctggtcgacg
     2641 agttccagga tctcaaccag ccgcagtacg ccatcctgcg ccggctggcc gccgggcatc
     2701 gcaatctgtt cgcggtgggt gacgacgagc aggcgatcta cgcctgggcc ggcgccgatc
     2761 tccaggtgat ccaggatttc gtcaaccact tcgagatcac ccggaaggag atcgtgctgg
     2821 acgagaaccg gcgctgctcc cgccagatct tcgagacggc gcggcggctg gtggatcaca
     2881 acccgcggct ctggagcaag gatctccggg ccacccgcga gggtgaattt ccggtcgccg
     2941 ttgagcggtt cgccgatgag tttgcggaag cgcgctggat catcg
//
LOCUS       DATIFF010000650         1275 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2235089, whole genome shotgun sequence.
ACCESSION   DATIFF010000650 DATIFF010000000
VERSION     DATIFF010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2235089"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            222..785
                     /locus_tag="VLD58_09655"
     CDS             222..785
                     /locus_tag="VLD58_09655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54611.1"
                     /translation="MMIDYRQLRAVLRTAVIWGGAWALAGGALIGALRLFNSGPGVES
                     LPERLGVAILSGVSWGIRFGIIGSVIGTGFASIITLGYRGRRLADINPVGFALLGALV
                     GGAGVPLFLQLMNVLSGDGPISWGLVLDDAIWATVFGAAAAAGSILLARRAAVLPHGP
                     HRDRLEPVDDADPPLPAAQQETPISRP"
     gene            complement(774..>1275)
                     /locus_tag="VLD58_09660"
     CDS             complement(774..>1275)
                     /locus_tag="VLD58_09660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54612.1"
                     /translation="LLWAIPWSVLLGLGVTVTVLLLGVRIGALSALGQGMATGFSWGL
                     AAGALFASALMLAEQQRGFAGLTRTRGAIWGGLAGIWFPALIGIAFGPKVLPWISGAW
                     PAWLGAAVMGAVSGLATVWLAGRGAGTFPRSMEPDPALSDPLVSASLSDPRPHGSVKE
                     AGHLGA"
BASE COUNT          205 a          431 c          450 g          189 t
ORIGIN      
        1 gggggcggtg aacttcctga tgctcgagcc ctccacctgg atcatgcaga cgcggcagtt
       61 tctgggtctc aagcgacgcg ccgaacaggc tgcggtcgca cctggccggg aatcatgacc
      121 accggcccgt cagccgcccc acgcaacctt gtcgccattc ggaatggaga gtactttgta
      181 atgcaaagtg actccccaac gttcagggcg actcaggagg ggtgatgatc gactaccgac
      241 agttacgggc cgtgttgcgg accgccgtga tctggggtgg ggcctgggcc ctcgccggcg
      301 gcgcgctgat cggcgcgctc cggctgttca attccggccc cggggtcgag tccctgcccg
      361 agcggctcgg cgtggcgatc ctgtccgggg tgtcctgggg catccggttc ggcatcatcg
      421 gatcggtgat cggaaccggc ttcgcgagca tcatcacgct cggctatcgg ggccggcgcc
      481 tggccgatat caaccccgtg ggcttcgcgc tgctgggcgc gctcgtcggg ggtgcgggtg
      541 tacccctctt cctgcagctg atgaatgtgc tgtccggcga cggaccgatt tcgtgggggc
      601 tggttctcga cgacgcgata tgggcaaccg tgttcggcgc cgctgcggcc gccggctcca
      661 tcctgctggc gcgccgcgcc gccgtgctgc cgcacgggcc gcatcgtgat cggctcgagc
      721 ccgtggacga cgccgacccc ccgctgccgg cggcacagca ggagaccccg atctcacgcc
      781 cctaggtggc cggcctcctt gaccgaacca tgcgggcgcg gatcgctcag gctggcgctg
      841 acgagcggat cggaaagggc cgggtcgggc tccatcgaac gtggaaaggt gccggcgcct
      901 cgaccggcga gccagacagt ggccaggccg gagactgcac ccatcacggc ggcgccgagc
      961 caggcgggcc acgccccgct gatccatggg agaaccttcg gaccaaacgc aatcccgatg
     1021 agagccggga accagattcc ggccagacca ccccagatcg cgccccgagt ccgggtcagg
     1081 ccggcgaacc cgcgctgctg ctcggcgagc atcagcgcgg aagcgaagag ggctccggct
     1141 gccaggcccc aggagaatcc ggtggccatg ccttggccga gggcactgag tgcgccgatc
     1201 cggactccga gaaggaggac ggtgacagtc acacccaggc caaggagaac ggaccagggg
     1261 atagcccaga gcagg
//
LOCUS       DATIFF010000651         1236 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1928277, whole genome shotgun sequence.
ACCESSION   DATIFF010000651 DATIFF010000000
VERSION     DATIFF010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1236
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1928277"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..240)
                     /locus_tag="VLD58_09665"
     CDS             complement(<1..240)
                     /locus_tag="VLD58_09665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54613.1"
                     /translation="MRRHSRLVLLVGVTLAAGGCDWYYNTLPSPDKLWEVIPWFDQMV
                     VQKSVPPYSRLDVPRYTPDGTVPVTGGEPDWSAEWL"
     gene            complement(227..748)
                     /locus_tag="VLD58_09670"
     CDS             complement(227..748)
                     /locus_tag="VLD58_09670"
                     /inference="COORDINATES: protein motif:HMM:NF023249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3341 domain-containing protein"
                     /protein_id="HSB54614.1"
                     /translation="MAGRPRIVPGVLASFEHIDAATDAIKALRAGGHRDLVVYCSHPN
                     HELEEALETPVSPVRLFTLIGGLTGTTAATAMTVWMNLDWPTLVGGKAIAAIPAFVAI
                     MFELTVLIGALASVGGVIVLVLMGTRRGVMYDPRFSDDRIGVFVPAAAEGAPALERLF
                     RDAGAVEVRHATA"
     gene            complement(748..>1236)
                     /locus_tag="VLD58_09675"
     CDS             complement(748..>1236)
                     /locus_tag="VLD58_09675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase"
                     /protein_id="HSB54615.1"
                     /translation="HFDNLAKLTLLTGSILFYAYGMEYFIAWYSGNTFEQTTFWRRAF
                     GPYWWAGWTMITCNAFVSQLLWFKKIRTNLTALFVVSIFINIGMWFERYVIIVSSLSN
                     DFIPWAWDGLNPTWADWGILAGSFGWFGMWFLLFARTFPIVAIQEIKEMIPLPRRRGG
                     QH"
BASE COUNT          228 a          420 c          409 g          179 t
ORIGIN      
        1 gagccactcg gcgctccagt ccggctcgcc cccggtgacc ggcacggtgc cgtccggcgt
       61 gtagcgcggc acgtccaggc gggagtacgg cggcaccgac ttctggacca ccatctggtc
      121 gaaccagggg atgacttccc agagcttgtc gggcgagggc agcgtgttgt agtaccagtc
      181 gcacccgcct gccgccagcg tgacgccgac gaggagcacc agtcggctat gccgtcgcat
      241 gacgcacctc caccgctccc gcgtcgcgga acaggcgctc gagcgcgggc gcgccctcgg
      301 cggcggccgg gacgaacacg ccgatccggt cgtcgctgaa gcgcgggtcg tacatgaccc
      361 cgcgccgggt gcccatgagc accaggacga tgaccccccc cacgctggcg agtgcaccga
      421 tcaagacggt cagctcgaac atgatggcca cgaacgccgg gatcgcggcg atcgccttgc
      481 cgccgaccag cgtgggccag tcgagattca tccagacggt catcgccgtg gccgcggtgg
      541 tgccggtgag gccgccgatg agcgtaaaga gccgcaccgg actcaccggg gtctccagcg
      601 cctcctccag ctcgtggttc gggtgggagc agtagaccac gagatcccga tgcccgcccg
      661 cccgcagcgc cttgatcgcg tcggtcgccg cgtcgatgtg ctcgaacgag gccagaacgc
      721 cgggaacgat ccggggacgc ccggccatca gtgctgccct ccccgcctac gcggcagcgg
      781 gatcatttcc ttgatctcct ggatcgccac gatcgggaac gtccgggcga acagcaggaa
      841 ccacatgccg aaccagccga aggagcccgc caggatgccc cagtcggccc aggtcgggtt
      901 gagcccgtcc caggcccagg gtatgaagtc gttcgagagc gaggagacaa tgatcacgta
      961 gcgctcgaac cacatcccga tgttgatgaa gatcgagacc acgaacagcg ccgtgagatt
     1021 ggtccggatc ttcttgaacc agagcagctg cgacacgaag gcattgcagg tgatcatcgt
     1081 ccagccggcc caccagtacg gcccgaacgc ccgccgccag aacgtggtct gctcgaatgt
     1141 gttgccgctg taccaggcga tgaagtactc catgccgtac gcgtagaaca ggatcgagcc
     1201 ggtgagcagc gtgagcttgg ccaggttgtc gaagtg
//
LOCUS       DATIFF010000652         1223 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_82433, whole genome shotgun sequence.
ACCESSION   DATIFF010000652 DATIFF010000000
VERSION     DATIFF010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1223
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82433"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..295)
                     /locus_tag="VLD58_09680"
     CDS             complement(<1..295)
                     /locus_tag="VLD58_09680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HSB54616.1"
                     /translation="MADVKLDHPAGQLSMPLHDAVEGASGIDIGKLLSQTGYVTYDPG
                     FVNTAACASAITYIDGDAGILRYRGYPIEELAEKSSFLEVAWLLLQGELPTKAE"
     gene            complement(399..>1223)
                     /gene="nadE"
                     /locus_tag="VLD58_09685"
     CDS             complement(399..>1223)
                     /gene="nadE"
                     /locus_tag="VLD58_09685"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF014586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HSB54617.1"
                     /translation="RALVLGLRDYVRKNAFKSVVVALSGGIDSTVVAAIAVDALGASS
                     VVGVSMPSQHSSEHSKRDAADLARRTGLDFRTEPIQPMVDAFLANMSLSGLAVENLQA
                     RVRGVVLMALSNQEGHLVLTTGNKSELAVGYSTLYGDSVGGFNPLKDVPKTMVWQLAR
                     WRNAAARQRGEQPPIPESTISKAPSAELRPGQLDTDTLPEYEVLDPLLAEYIDGDASR
                     EGLIQAGHDPAVVDKVLRMVDLAEYKRRQSAPGPKISIKAFGRDRRLPITNRFRES"
BASE COUNT          179 a          429 c          413 g          202 t
ORIGIN      
        1 gctcggcctt ggtgggcagc tcgccctgca gcagcagcca ggcgacctcg aggaagctcg
       61 acttctcggc cagctcctcg atcgggtagc cgcggtagcg caggatgccg gcgtcgccgt
      121 cgatgtacgt gatcgccgac gcgcaggcgg cggtattgac gaagccggga tcgtaggtga
      181 cgtagccggt ctggctcagc agcttgccga tgtcgatgcc ggacgcgccc tcgactgcgt
      241 cgtgcagcgg catcgacagc tggccggccg ggtggtcgag cttgacatcc gccatcgcga
      301 acctcgttcc gccgtctttc ttccgttgcc gagttaatat caccgtaatc cctgggcgcg
      361 tggaaggccc aagccgccga ccgtgagtga gtgatggatc acgactcgcg gaagcggttg
      421 gtgatcggca ggcgacggtc ccggccgaac gccttgatgg agatcttcgg gccgggcgcc
      481 gactgccgcc gcttgtactc ggccaggtcg accatgcgca gcaccttgtc caccactgcc
      541 gggtcgtgcc cggcctggat cagcccttcc cggctggcgt cgccgtcgat gtactcggcg
      601 agcagcggat ccagcacctc gtactccggc agcgtgtcgg tgtccagctg cccggggcgc
      661 agctccgcgc tgggcgcctt gctgatcgtg gactccggaa tcggcggctg ctcgccgcgc
      721 tgccgggccg ccgcgttgcg ccaccgcgcc agctgccaca ccatcgtctt gggcacgtcc
      781 ttgagcgggt tgaagccgcc caccgagtcc ccgtacagag tggagtagcc gaccgccagc
      841 tcgctcttgt tcccggtggt cagcaccagg tggccctcct ggttggacag tgccatcagc
      901 accaccccgc gcacccgggc ctgcaggttc tccaccgcca acccggacag ggacatgttg
      961 gccaggaagg cgtccaccat cggctggatc ggctcggtcc ggaagtccag gccggtgcgg
     1021 cgggccaggt cggccgcgtc ccgcttggag tgttccgagg agtgctggct cggcatcgac
     1081 acaccgacca cactggacgc gccgagggcg tccaccgcta tggcggccac gaccgtggaa
     1141 tcgatcccgc cggagagggc aaccaccacc gacttgaagg cgttcttccg gacgtagtcg
     1201 cgcagcccga gcaccagcgc ccg
//
LOCUS       DATIFF010000653         2444 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_543511, whole genome shotgun sequence.
ACCESSION   DATIFF010000653 DATIFF010000000
VERSION     DATIFF010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2444
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_543511"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..782)
                     /locus_tag="VLD58_09690"
     CDS             complement(<1..782)
                     /locus_tag="VLD58_09690"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HSB54618.1"
                     /translation="MTDLLTGLSPTAELVVVLLAKVTLVLTGAGLAALALRRVSAGVR
                     HLVWSAAIVASLALPVFALWSPWRWEVGVLAAAPSSGLATPVAPRQLDLRTGEPNTAG
                     GDPAVETPAGGEAAPVTSTAPRRSFDDWTLQQKLLALWLAGAGLIALRLMLGSFLVAR
                     LVRRAVPLTAPEWQRPLIDVADRLALPRLPGLFLSNRLPMPFACGFITPAVVLPAEAG
                     EWPAARRHAVLCHELAHLHRRDLVLNLIAQWALAVFWFHPLM"
     gene            complement(785..1171)
                     /locus_tag="VLD58_09695"
     CDS             complement(785..1171)
                     /locus_tag="VLD58_09695"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HSB54619.1"
                     /translation="MAEQREALSRREREVMDVLYRRGEATVSEVMEELVDPPSYSAVR
                     SIFRVLESKGHISHREDGPRYVYSPVVNKERARSAALDHVVNTFFGGSAERAVAALLR
                     RSDLGLSEAQLKKLAQEIQQAREEGR"
     gene            complement(1252..1938)
                     /gene="radC"
                     /locus_tag="VLD58_09700"
     CDS             complement(1252..1938)
                     /gene="radC"
                     /locus_tag="VLD58_09700"
                     /inference="COORDINATES: protein motif:HMM:TIGR00608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HSB54620.1"
                     /translation="MTQPASSSPATPDRPRERLWTVGAAALTATELLAILLGTGDANA
                     DASVVARELLDRAGGSLRDLASRPPAELTRTRGVGGAKAARLIAAFELATRLLQEQRP
                     LLPRVRAPEDVAALLSPRLRDLAVEEFHVLALDSQSRVRRDVLVTRGLLNSALVHPRE
                     VFRAAIAEAAAGIIVVHNHPSGDPTPSPEDRAVTRQLAEAGKLLDLPLYDHVILAGDR
                     YLSFVSAGLL"
     gene            complement(2010..>2444)
                     /locus_tag="VLD58_09705"
     CDS             complement(2010..>2444)
                     /locus_tag="VLD58_09705"
                     /inference="COORDINATES: protein motif:HMM:NF019155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SEC-C metal-binding domain-containing protein"
                     /protein_id="HSB54621.1"
                     /translation="DLDQLRNAIQYRAYGQRDPLVEYKKEAFEMFEDLMRDMQATFTE
                     RFLKIQVTAEPPRPPAPPRGRPEKPAPRPEELSSGADDLFSPDARMAPPPVPGPRAQP
                     PVTTSMGPLRQDSGNGVPEVGRNDPCPCGSGKKYKKCHGVGR"
BASE COUNT          404 a          820 c          881 g          339 t
ORIGIN      
        1 cacatgagcg ggtggaacca gaagaccgcg agcgcccact gggcaatcag gttgaggacc
       61 agatcacggc gatggagatg ggccagctca tggcagagca ccgcgtgacg gcgcgcggcc
      121 ggccactcac ccgcttccgc cggaagcacg acggcgggag tgatgaagcc gcaggcgaac
      181 ggcatgggaa ggcgattact caggaacagc ccaggcagcc gcggtagcgc caggcgatcc
      241 gcaacgtcga tcaggggacg ctgccactcg ggcgcggtga gcggcaccgc gcgccgcacc
      301 aggcgagcga ccaggaacga tcccaacatc agcctgagcg cgatgaggcc cgcgcccgcc
      361 agccagaggg ccaggagctt ctgctgcagg gtccagtcgt cgaacgaccg gcggggagcg
      421 gtgctcgtga cgggcgcggc ctcaccgcca gccggcgtct cgaccgcagg gtccccgccg
      481 gccgtgtttg gctcaccggt cctgaggtcg agctggcgcg gagccaccgg agtggccagg
      541 ccggaggacg gcgccgcggc aagcactccg acctcccaac gccagggtga ccagagagca
      601 aagaccggca gcgccaggct cgccacgatg gcggcgctcc acaccagatg ccggactccg
      661 gccgagaccc gccgaagcgc gagcgcggcc agtccggcgc cggtcagcac caacgtcacc
      721 ttcgcgagca gcacgaccac cagttccgcg gtcggcgaga gcccagtaag caggtcggtc
      781 atcgtcagcg tccttcctct cgagcctgtt gaatttcctg ggccagcttc ttgagctggg
      841 cctccgacag gcccaggtcc gaccgccgca acagcgccgc cacggcccgc tcggccgagc
      901 cgccgaagaa ggtgttcacc acgtgatcga gagcggcgct ccgggcccgc tccttgttga
      961 cgacgggcga atagacatag cgcgggccat cttcccgatg ggagatgtgc cccttggact
     1021 cgagcacccg gaagatggag cgcaccgcgg aatagctggg tggatccacc agctcctcca
     1081 tgacctcgga gaccgtggcc tctccccgac ggtacaggac atccatgacc tcgcgttccc
     1141 gccggctcaa cgcctcccgc tgctccgcca tgcctcgcct ccgcttgggt gctgaaattt
     1201 cagcacaagg tatggtacgg gcccccggcg gtcaagtttc aggatggatg gctagaggag
     1261 accggcgctg acgaagctca gatagcggtc gccggccagg atgacgtggt cgtagagcgg
     1321 caggtccagc agcttccccg cctcggccag ctggcgggtg accgcccggt cctcgggcga
     1381 cggggtagga tcgccgctgg gatggttgtg caccacgatg atccctgcgg cggcctcggc
     1441 gatcgcggcg cgaaacactt cgcgtggatg caccagcgcg ctgttgagca ggccgcgggt
     1501 taccagcaca tcccgccgga cccggctctg gctgtcgagc gcgagcacgt ggaattcctc
     1561 gaccgccaga tcgcgcaggc gcgggctcaa cagggctgcg acatcttccg gggccctcac
     1621 ccgcgggaga agggggcgtt gctcctggag gagccgggtg gccagctcga acgcggcgat
     1681 gagccgggcc gccttggcgc cacccacgcc tcgggtgcgg gtcaactccg ccgggggacg
     1741 ggaggccagg tcgcgcagcg atccacccgc ccggtcgagc agttcacggg cgaccacaga
     1801 cgcatcggcg ttggcgtcgc cggtgcccag gagaatggcc aggagttcag tggcggtgag
     1861 cgctgcggcc ccgacggtcc agaggcgctc gcggggacga tcgggggtgg cgggagagct
     1921 ggaggctggc tgggtcatgg aggaggatat cgatccccca tgaccagcca gttaccacaa
     1981 aagtgcgata cggcgcagag gcgggcgggt cagcgaccca cgccgtggca cttcttgtac
     2041 ttcttgccgc tgccgcaggg gcaggggtcg ttgcgaccca cctcgggcac gccgttcccg
     2101 ctgtcctgcc ggagcgggcc catgctggtg gtcaccggcg gttgggccct ggggccgggg
     2161 accggcggcg gcgccatgcg ggcatcggga gaaaacaggt catcggctcc gctcgaaagc
     2221 tcctccggac ggggcgccgg cttttcggga cggccccgtg ggggcgctgg cggacggggc
     2281 ggctcggccg tcacctggat cttgaggaac cgctcggtga aggtcgcctg catgtcgcgc
     2341 atgaggtctt cgaacatctc gaaggcctct ttcttgtact cgaccagcgg atcgcgctgg
     2401 ccgtaggcgc ggtactggat cgcgttgcgg agctggtcga ggtc
//
LOCUS       DATIFF010000654         2198 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2082894, whole genome shotgun sequence.
ACCESSION   DATIFF010000654 DATIFF010000000
VERSION     DATIFF010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2198)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2198)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2198
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2082894"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1273)
                     /locus_tag="VLD58_09710"
     CDS             complement(<1..1273)
                     /locus_tag="VLD58_09710"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSB54622.1"
                     /translation="MRSRASLQGTVTVLILALGAALVAVGYLHEVRSSAAAIRSLVRD
                     RASAMGNRVASKMEYLTARGDSGLAQLEIAGLGGTPDIRVALVADPTDTIRLSTEVGL
                     AGRPLSAVLGPEFAAGSPFRGSVLGRFVYSDSQITAVYPYRAPPAAGELRSRRTGVVV
                     LSYDLATPTALARSEARRDSLLQAAVVLILCLLTWAGLHTLLTVPLKLLADGTRRLAD
                     GATGMALPEGGPSEIQNLTASFNQMAGQVASRQRALERANRALRALSDCRRELARARD
                     ERALLESVCRVVVEQAGYRFAWVGYAETGEDRLVRPVAHVGYEAGYLEQARVTWDESD
                     LGRGPTGIAIRTGQPVVCQDILTDPRVDPWRHAQLARGYGASAVLPLKDAAGVVFGAL
                     SVYAAERGAFDDEEVKLLAEIAQDLALGIQAL"
     gene            complement(1270..>2198)
                     /locus_tag="VLD58_09715"
     CDS             complement(1270..>2198)
                     /locus_tag="VLD58_09715"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSB54623.1"
                     /translation="LALVACDRSPEPPLRVGVNLWAGNQSLHLAVERHLTGEFPVRLL
                     TFPSTTEVIRALQAGQLDAASITGDELLLTAYEAGPAAPRAIAVIDISLGADAILVRP
                     PARSMADLRGRRVGVESTGLGALMLARALQLHGIRKDEIRLVQVPSFDHERQFREGLV
                     DAVVTFEPVRSKLLATGAVEVFNSGEIPGEVMDVLVATPTAIARRGPALRALLDGYYQ
                     GRAFEEAYPDSARAHLSRYLRVPVEVVDQVLKGTSLVSLEESRRLLSPGPDGLAERLS
                     RLAIAMVQDGILPELRPTDSLVTPAFLPSPRP"
BASE COUNT          362 a          793 c          747 g          296 t
ORIGIN      
        1 gcagcgcctg aatcccgagc gccaggtcct gcgcaatctc cgccagcagc ttcacttcct
       61 cgtcgtcgaa ggccccacgc tccgcggcgt acacggaaag cgctccgaag accacgccag
      121 ccgcgtcctt gagcggcagg accgcggagg cgccatagcc acgagccagc tgggcgtgac
      181 gccagggatc gacccgcgga tcggtcagga tgtcctggca caccaccggc tgtcccgtcc
      241 ggattgcgat accggtcggt ccccgtccga gatcggactc gtcccaggta acccgtgcct
      301 gttcgagata gccggcttcg tagcccacat gggccaccgg cctcaccagg cgatcttcac
      361 cagtctcggc gtagcccacc catgcaaagc gatagccggc ctgttccacc accacccggc
      421 atacactctc gagcagggct cgctcgtcgc gcgcccgggc cagctcacgc cggcagtcgc
      481 tcagcgcccg caacgcgcgg ttggcacgct ccagcgcccg ctgccgcgag gccacctggc
      541 cggccatctg gttgaagctg gccgtgagat tctggatctc gctcgggcca ccctcaggca
      601 gagccatccc ggtcgcgcca tcggccagac ggcgggtgcc atcggccagc agcttgagcg
      661 gcacggtcag cagggtgtgg agcccggccc aggtaagcag gcagagaatg agcaccaccg
      721 cggcctggag cagggagtcc cgcctcgctt cgctgcgcgc cagcgccgtg ggcgttgcca
      781 ggtcgtagct cagcaccacc acgccggtgc gtctcgagcg cagttcgccc gcggccggcg
      841 gcgcacggta ggggtacacc gccgtgatct gggaatcgct gtagacgaag cggcccagca
      901 ccgaaccgcg gaacggcgaa ccggcggcga actccgggcc caacaccgcg ctcagcgggc
      961 gacccgccag cccaacttcg gtggacagcc ggatggtgtc ggtcgggtcg gccaccagcg
     1021 cgacccggat gtcgggcgtg ccgccgagcc ccgcgatttc cagctgcgcc aggccgctgt
     1081 cacccctggc ggtgagatac tccatcttgc tcgccacccg gttgcccatg gcagaggcgc
     1141 ggtcacgcac caggctgcgg atggccgcgg cgctgctcct cacctcgtgc aggtagccca
     1201 ccgcgaccag cgcagcccca agcgccagga tcagcaccgt cacggtgccc tgcagcgacg
     1261 cccggctcct cacggccggg gactcgggag aaaggcgggc gtaacgaggg aatcagtcgg
     1321 gcgcagctcc gggaggatgc cgtcctgtac catggcgatg gcgagccggg agagccgctc
     1381 ggcaaggccg tccggaccgg gactgaggag cctccgcgac tcttccaggc ttaccaggct
     1441 ggtgcccttg agcacttggt ccaccacctc gaccgggact cggagatacc gggaaaggtg
     1501 cgccctcgcg ctgtcgggat aggcctcctc gaaggcgcga ccctgatagt acccatcgag
     1561 gagggcgcgg agcgccggcc cccgtcgggc gatggccgtg ggagtggcga ccagcacgtc
     1621 catgacctcg ccgggaattt cgccgctgtt gaagacctcg accgcgccgg tcgccagcag
     1681 tttcgagcgc accggctcga aggtgacgac cgcatcgacc aggccttcgc ggaactgccg
     1741 ctcatggtcg aaggagggca cctgcaccag cctgatctcg tccttgcgga tgccgtgcag
     1801 ctgcagcgcc cgcgccagca tgagcgcgcc gagcccggtg gattcgaccc ccacccgacg
     1861 gccacgcaga tcggccatgc tccgcgccgg cggccgcacc agaatggcgt cagccccgag
     1921 cgagatgtcg atcaccgcga tagcgcgggg agccgcggga cctgcctcat aggccgtgag
     1981 caggagctcg tcgccggtga tggatgcggc gtccagctgg cctgcctgga gggcgcgaat
     2041 aacttcggtg gtagagggaa aggtgagcag cctgaccggg aactccccgg tgagatgccg
     2101 ttcgaccgcg agatgcaggc tctggttgcc ggcccacagg ttgaccccga cccggagcgg
     2161 cggctcgggg gaacggtcgc acgccaccag cgcgagca
//
LOCUS       DATIFF010000655         1451 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_83167, whole genome shotgun sequence.
ACCESSION   DATIFF010000655 DATIFF010000000
VERSION     DATIFF010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1451
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83167"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(45..464)
                     /locus_tag="VLD58_09720"
     CDS             complement(45..464)
                     /locus_tag="VLD58_09720"
                     /inference="COORDINATES: protein motif:HMM:TIGR00149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HSB54624.1"
                     /translation="MKSLTHYLWFNTKQRQEIIDVTEEVAEQVRASGVQEGIVLVSAM
                     HISASVFVNDHESGLWHDILHWLEHSVAPWDPKRYRHNDTGEDNAAAHLRSLTVGHEV
                     IIPITKGKLVFGPWQRVFYGEWDGGRRKRVVIKVLGE"
     gene            580..>1451
                     /locus_tag="VLD58_09725"
     CDS             580..>1451
                     /locus_tag="VLD58_09725"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HSB54625.1"
                     /translation="MALPVRRRIFFVLVLMAAVPTGLAVVSWVLTVRTFGPTAGARAS
                     LEEVAGSARGMLEHLDTTQLAPAARAGVREHLDAVSRGLSFARRADRYLRYYTAGLAI
                     VVVTLGTLVLVAAVYLAGHLSRQLSRPIDELVGWTRLIRRHEALPAGPPTRGAPEFAS
                     LRLALRDMAGALDTARGRELEAERLRAFREVARRVAHEIKNPLTSMRIAVDQLQRADA
                     AGPIDRRTAMAREVLAAETDRLERLAREFADFGRLPEGPTSEVDLVELLEELGRTAVP
                     EGVAVHVTANGGRRT"
BASE COUNT          207 a          496 c          501 g          247 t
ORIGIN      
        1 accattgaaa ctaaacaact tgcgcccaaa tgggaagccg ctggtcactc ccccagcacc
       61 ttgatgacca cccgcttgcg acgcccgcca tcccactcgc cgtagaacac ccgctgccac
      121 gggccgaaaa cgagcttgcc cttggtgatc gggatgatga cttcgtggcc caccgtcagg
      181 ctgcgcaggt gagcggcggc gttgtcctcc ccggtgtcgt tgtgccggta acgcttcggg
      241 tcccaggggg cgacggagtg ctccagccaa tggaggatgt cgtgccacag gccggactca
      301 tgatcgttga cgaagaccga cgccgagatg tgcatcgccg agacgagcac gattccctcc
      361 tggacgccgc ttgcgcgcac ctgctcggcg acctcttcgg tgacgtcgat gatctcctgc
      421 cgttgcttcg tattgaacca gaggtagtgg gtgagactct tcatcagctc ctcccgagag
      481 cagggagcac agagcagtac tgctccctgc tccgtgctct gtttcggttc ccgtgtcagt
      541 ttgtcgcgcc cgctccaacc tcctagattg ctgcaagata tggctcttcc ggtccgccgg
      601 cgcatcttct tcgtcctggt cctgatggcg gccgtgccca ccgggctggc cgtcgtctcc
      661 tgggtgctga cggtgcggac cttcgggccg acggcggggg cgcgggcctc gctggaggag
      721 gtggccggct cggcccgggg gatgctcgag cacctcgaca cgacccagct cgctccagcg
      781 gcgcgcgccg gggtgcgaga gcacctggat gccgtgtcac gcggcctgag cttcgcgcgg
      841 cgcgccgacc gctatctccg ctactacacg gccggactgg ccatcgtggt ggtcacgttg
      901 ggtaccctcg tgctggtggc cgccgtgtac ctggccggcc atctctcacg ccagctgtca
      961 cggcccatcg acgagctggt ggggtggacg cggctgattc gccggcacga ggcactcccc
     1021 gcgggcccgc cgactcgcgg cgcgccggaa ttcgcctcgt tgcgcctggc gctgcgggac
     1081 atggcgggcg cgctggatac cgctcgcggc cgggagctcg aggcggagcg cctccgggca
     1141 tttcgtgaag tggcgcggcg cgtcgcccat gagatcaaga atccgctcac ctcgatgcgg
     1201 atcgccgtcg accagctgca gcgtgccgac gcggcaggcc ccatcgaccg gcgcacggcc
     1261 atggcacgcg aggtcctggc cgcggagacc gaccggctgg agcggctcgc cagggagttc
     1321 gccgacttcg gccgtctccc ggaggggccg accagcgagg tggatctggt ggagctgctg
     1381 gaagagctgg gacggaccgc ggtgccggaa ggcgtggcgg tgcacgtgac cgccaacggc
     1441 gggcgccgca c
//
LOCUS       DATIFF010000656         1425 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2236057, whole genome shotgun sequence.
ACCESSION   DATIFF010000656 DATIFF010000000
VERSION     DATIFF010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1425
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2236057"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..781
                     /locus_tag="VLD58_09730"
     CDS             <1..781
                     /locus_tag="VLD58_09730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54626.1"
                     /translation="LMPGLVLALVLVPIARPLRAPESRALRTLLFLTALFAITVLTTP
                     RWYPGYIVGTVFLTLALVWAPAGIAYLRGEGRIGRGAIAASAAGVVLLAVVLGRSQEV
                     QYAEHHYTNTKLFLQDGGPQRAYALARRLRDERIGIAGSGEMFFGQYGYYGSDLSNRV
                     QYIGVPGPQGQYTLATSCREFRRQINAGSYDYLIISQYTQDSRDSPYWFPIRAWTKDD
                     PALKLVLEEPEITPEPDYVYRVKGKVDPAGCAKLGGGKSSS"
     gene            complement(1155..>1425)
                     /locus_tag="VLD58_09735"
     CDS             complement(1155..>1425)
                     /locus_tag="VLD58_09735"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSB54627.1"
                     /translation="EGVRAYWRRWLSAWTDLQFEIEDIVDHGDEVVALIRNQRQWGRH
                     SGIETEIPPYGIVFSFRDGKVVRWCGYPDQAAALEAAGLSGPRRS"
BASE COUNT          230 a          510 c          475 g          210 t
ORIGIN      
        1 cctgatgccg ggactggtgc tggcgctggt cctggtcccg atcgcccggc ccctgcgagc
       61 gcccgagagc cgggcgctcc ggaccctcct cttcctcacg gcgctgttcg cgatcaccgt
      121 gctgacgacc ccccgctggt accccggcta catcgtcggc accgtcttcc tcaccctggc
      181 gctggtctgg gccccggccg ggatcgccta cctgcgcgga gaggggcgga tcgggcgcgg
      241 cgcgatcgcg gcgagcgcgg ccggcgtcgt cctcctggcc gtggtcctcg gccgctcgca
      301 ggaggtccag tacgccgagc accactacac gaacaccaag ctcttcctcc aggacggggg
      361 cccgcagcgg gcctatgcgc tggcgcggcg tctgcgcgac gagcggatcg ggatcgccgg
      421 ctcgggagag atgttcttcg gccagtacgg gtactacggg tccgacctct cgaacagggt
      481 ccagtacatc ggggtgcccg gcccccaggg ccagtacacg ctggcgacca gctgccgcga
      541 gttccgccgc cagataaacg ccggcagcta cgactacctg atcatcagcc agtacacgca
      601 ggactctcgc gattcgccct actggttccc gatccgcgcc tggaccaagg acgatccggc
      661 gctgaagctg gtgctcgagg agccggagat aaccccggag cccgactacg tctaccgggt
      721 gaaagggaag gtcgaccccg ccggctgcgc gaagctgggg ggcggcaaga gcagctcctg
      781 acggcgccgc gccgggtgga gaggccccgc gcccgggtgg agaaccgaag gtgcgcggcc
      841 gagggctcaa gctcctgccg atctgaataa ccgtgcatga gcccgtccag gccgcgcgca
      901 gcaggcggag agagagggtg agaccgcctg cgtccttctg atggtgtgtt acccaccgat
      961 cccgcggact aaccaaattg gcgcgaaaga gggcgaaaac cgcgcccgag cggcgaaaag
     1021 gttgcggtgc ctcgagcggg cacctcgagg cgagcgtacc ccacgatctc gaccccggca
     1081 gcggctgccg ggagccgtga tcctgtcggc cttgctcccg cagctcggtc gccagagcgg
     1141 tggcggtcca ggcgtcaact tcggcgcggc ccggacagcc cggcggcttc gagggcggcc
     1201 gcttggtccg gatacccaca ccatcgcacg accttcccat cgcggaacga gaagacgatc
     1261 ccgtacggcg gtatctccgt ctcgatccca ctatgtcgtc cccactgacg ctggttgcga
     1321 atcagtgcca cgacctcgtc gccgtggtca acgatgtcct cgatctcgaa ctgaagatct
     1381 gtccacgccg acagccaccg ccgccagtag gcccgaactc cctcg
//
LOCUS       DATIFF010000657         1297 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_544378, whole genome shotgun sequence.
ACCESSION   DATIFF010000657 DATIFF010000000
VERSION     DATIFF010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_544378"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..850)
                     /locus_tag="VLD58_09740"
     CDS             complement(<1..850)
                     /locus_tag="VLD58_09740"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSB54628.1"
                     /translation="MERSRSDEMNSAITTLTGFRADFHRCLTGWADAAFELADAVLCA
                     PGPVASVPTLSLEPIFRRSHGSLYKALDRGGVDEQAIRDLLAAHRPSGWPLVFAIDAS
                     TWPRCDAETSPERGLYYSASTHSAGQPIVAGWSYQHLCQLDWACDSWTAPMDVRRIRP
                     HEDAVTLTLAQVSELVARLGQTKSPPLFVFDAGYDAIALTHELAGVRANLVVRIRDDR
                     VFYTDPNPPEPGAIGRPRRHGERRSCAHPATWPAPEQELTAEDPRYGTVRVAAWRQLH
                     PRLGCRG"
     gene            939..>1297
                     /locus_tag="VLD58_09745"
     CDS             939..>1297
                     /locus_tag="VLD58_09745"
                     /inference="COORDINATES: protein motif:HMM:NF042840.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6788 family protein"
                     /protein_id="HSB54629.1"
                     /translation="MARSAAQRLATYQRRYRELAAQLADLGYIAAGSITRRSTRCGTP
                     GCRCHADPPQLHGPYYQWTAKVNGKTITRRLSDEEAELYKQWIGNDRQLRAILTQMRQ
                     VAGQATELMMKQAKEQKA"
BASE COUNT          229 a          437 c          450 g          181 t
ORIGIN      
        1 gtccccgaca gccgagtctg ggatgcagct ggcgccaagc ggccacgcgg acggtcccat
       61 agcgtgggtc ctcggcggtg agctcctgct cgggggcggg ccaggtggcc ggatgcgcgc
      121 agctgcgtcg ttcgccgtgg cggcggggcc gcccgatcgc gccgggctcg ggtgggttcg
      181 ggtcggtgta gaagacccgg tcgtcgcgga tccgcaccac caggttcgcg cgcacgccgg
      241 cgagctcgtg ggtcagcgcg atcgcgtcgt agccggcgtc gaagacgaac aacggcgggc
      301 tcttggtctg accgagccgg gcgaccagct cgctgacctg ggcaagggtg agggtgacgg
      361 cgtcctcgtg tggccggatg cggcgtacgt ccattggcgc ggtccaggag tcacaggccc
      421 agtccagttg gcacaggtgc tggtaggacc agccagccac gatcggctgc ccggccgagt
      481 gggtggaggc ggagtagtag agtccgcgct cggggctggt ctcggcgtca caacgcggcc
      541 aggtggaggc gtcgatggcg aacaccaatg gccaaccaga gggccggtgc gccgcgagca
      601 ggtcccggat cgcctgctca tcgacaccac cacggtccag tgccttgtaa aggcttccgt
      661 ggctgcgccg gaagatcggc tccagactca acgtcggcac tgaggccacc ggccccggag
      721 cgcagagcac cgcgtcagcg agctcgaagg ccgcatcggc ccaacctgtc aagcagcggt
      781 ggaagtcggc tcggaagccg gtcagtgtcg tgatcgcgga gttcatctca tcggaccggc
      841 tgcgttccat gtggatctcc tcccgtgcca ggcagtagta atactgtctg gcacgatggc
      901 tgggaagatc gctccgacac gccgcaagga gacccgccat ggcacgatcg gccgcgcaac
      961 gactggctac ctaccaacgc cgttaccggg agctggcagc ccagctcgcc gacctcggat
     1021 acatcgccgc cggcagcatc actcgtcgca gcactcgctg cggcaccccg ggctgccgct
     1081 gtcatgccga cccgccgcag ctgcacgggc cctactacca gtggaccgcc aaggtcaacg
     1141 gcaaaaccat cacccgccgc ctcagcgacg aggaagccga gctctacaag cagtggatcg
     1201 gcaacgaccg acagctacgc gccatcctca cccagatgcg ccaagtcgcc ggccaggcaa
     1261 ccgagctcat gatgaaacag gccaaggagc agaaggc
//
LOCUS       DATIFF010000658         5169 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1161026, whole genome shotgun sequence.
ACCESSION   DATIFF010000658 DATIFF010000000
VERSION     DATIFF010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5169
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1161026"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            120..566
                     /locus_tag="VLD58_09750"
     CDS             120..566
                     /locus_tag="VLD58_09750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSB54630.1"
                     /translation="MITLSVNGQARSVDVEPETPLLWVLRDTLGLTGTKFGCGMALCG
                     ACTVDVDGQAMRSCIVPVSAAQGKRITTIEGLTPAGLHPVQKAWIALDVPQCGYCQTG
                     MIMAVAALLKAKPRPTDADIDAAITNICRCGTYARIRQAIHAAAKG"
     gene            580..2739
                     /locus_tag="VLD58_09755"
     CDS             580..2739
                     /locus_tag="VLD58_09755"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSB54631.1"
                     /translation="MSPMTDISRRSFLLDSAAAAGGLALGFYLPWDPGTGRAVAAQSA
                     EVNAWIVIQPDDTVIIRVARSEMGQGSFTALPMLVAEELECDWNKVKAEYASVAEHLR
                     RNRVYVTFSTGGSRSIRGSHDFLRQAGATAREMLIAAAAQQWGVPASECRAASSLITH
                     QPTGRSVTFGAVAEAASKLAPPKTVALKPPEQWKLIGKPVKRFDTADKVLGRPVFGVD
                     VRLPDMLHAAIRQCPVFGGALKSYDESAAKSRKGVRQVVPLKDAVAVVAESWWQAKQA
                     LEAMPVTWDEGPNAKVSSADILAFLRGGLTAADAAVARKDGDVAVALARASKVVEAEY
                     FAPFLAHATMEPMNCTAHVTADRVEVWVPTQNAEAALAAAADAAGMPPSKVEVHVTFL
                     GGGFGRRGAVQDYTRQAVTIAKAVGKPVNLLWTREEDIQHDFYRPVSLAKFTAGLDAS
                     GAPIAWRNRVSGNSIIATLFPERAPRGADLHFLEGLHDMPYAVPNVLVDYAMRNTHVP
                     VGFWRSVNHTQNAFFKECFLDELAHAAGQDPYQYRRRLLTGKPKELNVLDTAAQKAGW
                     GQPPPAGVFRGIALNESYGSHCAEVAEVSVSQKGAVRVHRVVCAIDPGYVVNPDTVQA
                     QAESSIVYGLTAALYGEITIKNGRVEQGNFDDYEMLRIDQMPKVEAYAVPTGGFWGGI
                     GEPFTPPVAPAVCNAIFAATGKRVRTLPLKNHDLKRA"
     gene            2838..3110
                     /locus_tag="VLD58_09760"
     CDS             2838..3110
                     /locus_tag="VLD58_09760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54632.1"
                     /translation="MIVAGAAVSGVPASAADPPVLASSCSGCHTSDDKLTTAIPKIRG
                     LPEAAIVQAMQAFRAGQRPATVMDRIAKGFTEDEIKQLAAQLSARK"
     gene            3121..4389
                     /locus_tag="VLD58_09765"
     CDS             3121..4389
                     /locus_tag="VLD58_09765"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSB54633.1"
                     /translation="MGSTRRRFLGLAAAGFAAPFLPRRAGAEAAARVIVVGGGFAGAT
                     CARFLRRHPPGLDVTLIEPNPTFTACPFSNAVLAGLRDIRDQRFGYQSLRAEGIKLIE
                     AAATAIDPQARQVRLADGTKLPYDRLVVAPGIDFRWNAIPGYSEAAAERMPHAWKAGE
                     QTLLLRRQLEGMADGGVVVIAVPANPYRCPPGPYERASLIAHYLKTRKPRSKVLVLDA
                     KDSFSKQGLFTAAWAQLYPGLLEWVPLSKGGKVTAVDPGAGSVSTDFEQYKPAVANVI
                     PPQQAGRVAELAGVADRTGWCPIDPVSFESRLQKNIHVIGDAAIAGAMPKSAFAANAQ
                     AKVCAAAVATLLRGSAPSDPVLVNTCYSLVAPDYGISVAGVYRPKEGQLADVEGAGGT
                     SPLQAPRENRALEAQYADAWFKTITHEVFG"
     gene            4707..4994
                     /gene="soxX"
                     /locus_tag="VLD58_09770"
     CDS             4707..4994
                     /gene="soxX"
                     /locus_tag="VLD58_09770"
                     /inference="COORDINATES: protein motif:HMM:TIGR04485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur oxidation c-type cytochrome SoxX"
                     /protein_id="HSB54634.1"
                     /translation="MSRQLGNCLLCHRMPIIEERFQGNLGPDLSGVGARLSEGQIRLR
                     VVDATRLNPATIMPPYYRVEGLQRVMAVYRDKPVLTAEQVEDVVAFLSALR"
BASE COUNT          823 a         1733 c         1850 g          763 t
ORIGIN      
        1 ccgagatctg ccggggcaag gcgtacttca ccacgcccat gacgctgggc cggtacctct
       61 tgatggacta catgacgaag aagatgcgga cgatccattg agggagatgg ggggctgaca
      121 tgatcacgct cagtgtcaac gggcaggcgc gctcggtgga tgtggagccg gagaccccgc
      181 tcctctgggt cctgcgcgac acgctggggc tcaccggcac gaagttcggg tgcgggatgg
      241 ccctgtgcgg ggcgtgcacg gtggatgtgg atggccaggc gatgcgctcc tgtatcgtcc
      301 ccgtgagcgc agcccagggc aagcggatca cgacgatcga gggcctgacg ccggccggcc
      361 tgcatcccgt ccagaaggcg tggatcgcgc tcgacgtgcc gcagtgcggg tactgccaga
      421 cgggcatgat catggcggtg gcggccctgc tcaaggcgaa gccccggccg acggacgccg
      481 acatcgacgc ggccatcacc aacatctgcc ggtgcggcac ctacgcccgc atccggcagg
      541 cgatccatgc cgcggcgaag ggttgagagg aggatggaca tgagcccgat gacagacatc
      601 agccgcagat ccttcctcct ggacagcgcc gccgcggccg gtggattggc gctcggcttc
      661 tatctgccgt gggaccccgg taccggccgg gccgtggcgg cccagtcggc cgaggtgaat
      721 gcctggatcg tcatccagcc ggatgacacg gtgatcatcc gcgtggcacg ctccgagatg
      781 ggccagggca gcttcaccgc cctgcccatg ctggtggccg aagagctgga atgcgactgg
      841 aacaaggtga aggcggagta cgcgtccgtg gccgagcacc tgcggcgcaa ccgggtgtac
      901 gtcacgtttt ccaccggcgg cagccgttcc atccgcggct cccacgactt cctgcggcag
      961 gccggcgcca ccgcccgcga gatgttgatc gcggcggcgg cacagcaatg gggcgtcccg
     1021 gcctcggagt gccgggcggc aagcagcctc atcacgcacc agccgaccgg acgcagcgtg
     1081 accttcggcg ccgtggccga ggccgcatcc aagctggcgc cgcccaagac cgtggcgctc
     1141 aagcctcccg agcagtggaa gctgatcggc aagccggtca agcgcttcga cacggcggac
     1201 aaggtcctgg gcaggcccgt cttcggcgtg gatgtccgtc ttcccgatat gctccatgcg
     1261 gccatccgcc agtgcccggt cttcggaggg gcgctcaaga gctacgatga gtcggccgcg
     1321 aagagccgga agggcgtgcg gcaggtcgtg ccgctcaagg atgccgtggc ggtcgtggcc
     1381 gagagctggt ggcaggccaa gcaggcgctg gaggcgatgc ccgtcacctg ggacgagggc
     1441 ccgaacgcca aggtgagcag cgcggacatc ctggccttcc tgcggggcgg actcacggcg
     1501 gcggacgcgg cggtggcccg caaggacggc gacgtggcgg tcgccctggc ccgggcgagc
     1561 aaggtcgtcg aggcggagta tttcgccccc ttcctggcac atgcgacgat ggagccgatg
     1621 aattgcaccg cccatgtcac cgccgaccgg gtggaggtct gggtcccgac gcaaaacgcc
     1681 gaggctgcgc tggccgccgc cgccgatgcc gccggcatgc cgccgagcaa ggtggaggtg
     1741 cacgtcacct tcctcggggg cggcttcggc cggcgcgggg ccgtccagga ctacacgcgt
     1801 caggccgtga ccatcgccaa ggcggtcggg aagccggtga atctcctgtg gacccgggag
     1861 gaggacatcc agcacgactt ctaccgcccg gtcagcctgg cgaagttcac ggccgggctg
     1921 gacgcctcgg gcgcgccgat cgcatggcgc aatcgggtct ccgggaactc gatcatcgcg
     1981 accctcttcc cggagcgggc tccccgggga gccgacctgc atttcctcga aggcctgcac
     2041 gacatgccct acgccgtccc gaacgtcctc gtggactacg cgatgcgcaa cacccacgtc
     2101 ccggtgggct tctggcggtc cgtcaaccac acgcagaatg ccttcttcaa ggagtgcttc
     2161 ctggacgagc tggcgcacgc ggcgggccag gacccctacc agtaccgccg gcgtctgctc
     2221 acgggaaagc ccaaggagct gaacgtcctg gacaccgcgg cccagaaggc gggctgggga
     2281 cagccgccgc ccgcgggggt gtttcgcggc atcgccctca acgaatccta cgggagccac
     2341 tgcgccgagg tcgccgaggt ctcggtgagc cagaagggcg cggtgcgcgt gcaccgcgtg
     2401 gtgtgcgcca tcgatccggg atacgtcgtg aatcccgaca cggtccaggc ccaggccgag
     2461 agctccatcg tgtacgggct gacggcggcc ctctacggcg agatcaccat caagaacggg
     2521 cgggtggagc agggcaactt cgacgactac gagatgctcc gcatcgacca gatgcccaag
     2581 gtggaagcgt atgccgtgcc gactggcggg ttctggggag gcatcggcga gcccttcacc
     2641 cccccggtgg cgcctgcggt gtgcaatgcg atcttcgccg ccacgggaaa gcgcgtccgc
     2701 acgctgccgc tcaagaacca cgacctgaag agggcctgac cgggcggcgg acggcgaaag
     2761 cgagtgcctg actgcgcagg agatgttcac tcatgggatg gctgcgatca cttgtctccg
     2821 tctccgtcgg tgggctgatg atcgtggcgg gggccgcagt ctcgggggtg ccggcgtccg
     2881 cggccgatcc tccggtcctg gccagctcct gttccggctg tcacaccagc gacgacaagc
     2941 tgaccacggc gattccgaag atccgggggc ttccggaagc ggccatcgtc caggcgatgc
     3001 aggcgttccg ggcggggcag cgcccggcga cggtgatgga ccggatcgcc aaggggttca
     3061 cggaggatga gatcaaacag ttggctgcac agctcagtgc ccgcaagtga tcggctgacc
     3121 gtgggaagca cgcggcgccg attcctgggt ctggcggccg cggggttcgc cgcgccgttc
     3181 ttgcccaggc gggcgggcgc ggaggccgcg gcccgcgtca tcgtcgtggg cggcggtttt
     3241 gccggcgcca cctgcgcccg cttcctgcgc cggcatcccc cggggctcga cgtgaccctg
     3301 atcgagccca accccacctt cacggcctgc cctttcagca acgccgtgct cgccggcctc
     3361 cgcgacatcc gggaccagcg cttcgggtat cagtcgctgc gcgccgaggg tatcaagctg
     3421 atcgaggcgg cggcgaccgc catcgatccg caggcccggc aggtgcgcct ggccgacggc
     3481 acgaagctgc cttacgatcg cctggtggtc gcgcccggca tcgacttccg ctggaatgcc
     3541 attcccggct acagcgaggc cgcggcagaa cggatgcccc acgcctggaa ggccggcgaa
     3601 cagacgctcc tcctgcgacg ccagctcgag ggcatggcgg acggcggggt ggtggtcatc
     3661 gccgtgccgg ccaaccccta ccgctgcccc cccggtccct acgagcgcgc cagcctgatc
     3721 gcgcattatc tcaagacgcg gaagccacgt tcgaaggtgc tcgtgctgga tgccaaggac
     3781 agcttctcca agcagggcct cttcaccgcc gcgtgggcgc agctctatcc cggcctgctg
     3841 gaatgggtgc cgctctcgaa ggggggcaag gtgacggcgg tcgatccggg cgccggcagc
     3901 gtgtccacgg acttcgaaca gtacaagccc gccgtcgcca acgtcatccc gccccagcag
     3961 gccggccggg tcgcggagct ggcgggcgtg gcggatcgca cggggtggtg cccgatcgat
     4021 ccggtgagct tcgagtcgag gctgcagaag aatatccacg tcatcggcga tgccgccatc
     4081 gcgggggcga tgccgaagtc cgccttcgcc gcgaacgccc aggccaaggt ctgcgccgcg
     4141 gcggtcgcca cgctcctgcg tggaagtgcg ccgtcggacc cggttctggt gaacacctgc
     4201 tacagcctgg tcgcaccgga ttacgggatc tccgtggcgg gggtctaccg cccgaaggag
     4261 gggcagctcg ccgatgtcga gggagccggc ggcacgagtc cgctccaggc gccacgcgag
     4321 aaccgcgcgc tggaggccca gtacgccgac gcctggttca agaccatcac ccatgaggtg
     4381 ttcgggtgac cccgtcatcc tgcacacgag tttctggaat ggagtcgggt ccgagcaaat
     4441 cccccctccg cctccctttg gcaaaggggg gggcgggggg atttggccgg accgagaact
     4501 gagtggacag catcgcgatt ggccgggggc gaacggaacg agcggcggcc tggcggcggc
     4561 aagcggcgct ggcggttgtc gtgatggtct gcagccccgc cattgttcgc gcagaggcgg
     4621 tgcgatcctt cgtggtggtc ggggatgcga tcccgcagtc cttgaccggt cggcacgggg
     4681 atccggggcg cgggcgcgag gtcgtggtga gccggcaact cggcaactgc ctgctctgcc
     4741 accggatgcc aatcatcgaa gaacgatttc aggggaacct cggacccgac ctctccgggg
     4801 tcggggcacg gctgtcggag ggacagatcc gcctccgggt cgtggatgcg acgcgactga
     4861 atcccgcgac gatcatgccg ccctattacc gggtggaggg cctgcaacgg gtcatggccg
     4921 tctaccgcga caagcccgtc ctcacggccg agcaggtcga ggacgtggtg gcctttctct
     4981 cggcgcttcg ctgaccacgt gactggaagg agtcgagaag acatgtcccg gggtcccgga
     5041 cggacgatgc tcctcacgcg ccggcagttc atcggcgcaa ccaccctggg gatggcgctg
     5101 ccgctcagcc ggcggcgcgc cgcgcacgcg agccccgaga ccgcctcggc ggcgatgaag
     5161 gcggtcctg
//
LOCUS       DATIFF010000659         2799 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_390631, whole genome shotgun sequence.
ACCESSION   DATIFF010000659 DATIFF010000000
VERSION     DATIFF010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2799)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2799)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2799
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390631"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(617..1810)
                     /locus_tag="VLD58_09775"
     CDS             complement(617..1810)
                     /locus_tag="VLD58_09775"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSB54635.1"
                     /translation="MSRPTPRRLWTYLCRRLRLQAYFQAPGDGRVRPEIPAHVLLWAL
                     LLGQVLREVSYAGLEALVCSPARPALAVARRFGDDALAYFTARLAPGPTRAALAATLR
                     QAKRNKAFEDSYLIGFALDGTGAGRSAAARCPFCHPRRDTQGRVTGYGHHCCLITVVG
                     TGLTLPFDVEPYGPGDSEYGAGQRLLERAVAAVGRRFADYVVVDGEFATAPFLHVAGD
                     LGLRVVARLKGNLPELSGTAQARFAAQPPTATFTVGTDRIEVWDADDFDPWATLRWAT
                     VRVLRYRQHKPDGTVVEAYWLTDFPAARASSPTLFRLAKSRWEVENQGFNEAKTAHGL
                     EHICHHHANSLLIGWLLAIFALTIERLYRLRYLRRGTHQPCAPLAFVRLLRLSLAPPR
                     PLDTS"
     gene            complement(1807..2154)
                     /locus_tag="VLD58_09780"
     CDS             complement(1807..2154)
                     /locus_tag="VLD58_09780"
                     /inference="COORDINATES: protein motif:HMM:NF042840.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6788 family protein"
                     /protein_id="HSB54636.1"
                     /translation="MDVKPKGPQAARLRQRQFALSRRFQIPADLLPGSLSQTTRRCGK
                     PTCHCAQGEGHPIWYLTFMVAGQKRVERIPDAWVADVRRRVEAGREFKQAVAEVMAAN
                     AQLLALWRRQTGR"
     gene            2413..2574
                     /locus_tag="VLD58_09785"
     CDS             2413..2574
                     /locus_tag="VLD58_09785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54637.1"
                     /translation="MEEPQVRDEAPGLNKPFCPFCFMQQFEVTETSSGTVYCDNCGID
                     VPVKDLVKL"
BASE COUNT          426 a          933 c         1013 g          427 t
ORIGIN      
        1 gtcaagccgg gtgcccaact ccctggcggg gccgacgccg gcggcgtcgt gtcgctccgc
       61 gccgcccgcc acgtccggcc gagtccgctc ggacacgccc gccgggtcgg gcaccgtgtg
      121 ggtgaggtcc acgatcgcgg acttccccag catcgctcgc tccaacgccc ccgcccacgc
      181 cggagcgccg tggataagca gcagcccgca cagcgtcacc gcgatgcctg cccgccgcca
      241 accccccagc ctgcgagccc gtctcgccat agacaccatg tcggggtgga gccctgaccc
      301 ttctcctcgc atttgtccgc ggcgatgttt tcggccgctc ccacgccctg tggcgaccat
      361 agcataggcc caaatacgtg tcaacgcgcg cacagtgggg gcagcaactt cggaacttcg
      421 tctgcagatg tgatcggggg gaggcgggga atgcggtggg cgagcttcgt ggggtgatcc
      481 ggagcggagg agctattttc gggaggctgc tggacgacgc gaggcggctc gcggaccgag
      541 gcaggtgaca ccgggcccgg tccgggctcc ccggcagaca tccgatccgt gcgggcaggc
      601 ggtgagggac cggccgtcag ctcgtatcca gggggcgagg cggggccagg ctgaggcgga
      661 gcagccggac gaacgcgagc ggggcacacg gctggtgcgt gccgcggcgc aggtagcgca
      721 ggcggtagag ccgctcgatg gtcagggcga aaatcgccag gagccagccg atcaggagac
      781 tgttggcgtg gtggtggcag atgtgctcca gcccgtgggc ggtcttggcc tcgttgaagc
      841 cctggttctc cacctcccac cggctcttgg ccaggcggaa gagcgtcggg ctgctggccc
      901 gcgcggcggg gaagtcggtc agccagtacg cctcgacgac ggtcccatcg ggcttgtgct
      961 gccggtagcg gaggacgcgg accgtcgccc agcgcagcgt cgcccacggg tcgaaatcat
     1021 ccgcatccca cacctcgatg cgatcggtgc ccacggtgaa ggtagcggtg gggggctgcg
     1081 cggcgaagcg cgcctgggcg gtgccggaca actccgggag gttccccttc agccgggcca
     1141 ccacccggag gccgaggtcc cccgccacgt ggaggaaggg ggccgtggcg aactcgccgt
     1201 ccaccacgac gtagtcggcg aagcggcgac ccaccgcggc cactgcccgc tcgagcaggc
     1261 gctggccggc gccgtactcg ctgtcccccg gcccgtaggg ttcgacatcg aaaggcaggg
     1321 tgaggcccgt gccgaccacg gtgatgaggc agcagtggtg cccatagccc gtcacccgac
     1381 cctgggtatc ccggcgggga tggcaaaagg gacagcgggc cgccgcgctc cgccctgcgc
     1441 cggtcccgtc gagggcgaag ccgatgaggt agctgtcctc gaaggccttg ttccgcttgg
     1501 cctgccggag cgtcgcggcc agcgccgccc gggtcggccc cggggcgagc cgggcggtga
     1561 agtaggccag cgcgtcatcc ccgaagcgcc gggccacggc gagcgccggg cgcgcgggcg
     1621 agcagaccag ggcctccagc cccgcgtagc tcacctcgcg gagcacctgg ccgaggagta
     1681 gggcccacag caggacgtgg gccggaatct ccgggcggac ccggccgtcc ccgggtgcct
     1741 ggaagtaggc ctggagccgc aggcgccgac acagataggt ccagaggcgg cgtggggtcg
     1801 ggcggctcac cggcccgtct ggcgccgcca gagcgccagg agttgggcgt tcgccgccat
     1861 gacctccgcc acggcctgtt tgaactcgcg gcccgcctcg acgcggcgcc gcacgtccgc
     1921 gacccaggcg tccgggatcc gctcgacccg cttctgcccc gccaccatga aggtgaggta
     1981 ccagatggga tggccctcgc cttgtgcgca gtggcaggtg ggcttgccac accggcgggt
     2041 ggtctgggac agggagccgg gcagcagatc cgccgggatc tggaaccgcc gactcagcgc
     2101 gaactgccgc tgccggaggc gcgccgcctg agggcctttt ggcttcacgt ccatctgcat
     2161 ggtaatatac atgcagacac ccggaaatgc aagccctttc tgcgaatgcg aaaatagcac
     2221 tggctcctgc cgatgggcta tcgtcggatc ttcaaaggcc ggtacggtct ttctgtgcga
     2281 ggtcttccga aacggctgca gtgggggcac cggtctatgc ctctttgcag aggcgttgac
     2341 cgggcggatt gacgttcttc gccatgtccg ctactctgac atcgtggccc atttgcctgg
     2401 ggagatcaaa agatggaaga accgcaggta cgcgacgaag cgccgggtct caataagccg
     2461 ttctgtccgt tttgtttcat gcagcagttc gaggttacgg aaacatcgtc gggcaccgtg
     2521 tactgcgaca actgcggcat cgacgtgccg gtgaaggatc tggtcaagct gtgacgaggt
     2581 cgcccgtcgt gcgccgcctt cacgtcgctg ttctctgtct cgtcgtgcct gtcgcggtcc
     2641 tcgcgcagac tccgccggag atggggtggc tgggagtctc catcgccgat gtcaacgagg
     2701 aactggcgga ccgcctcggt tcgatattcg gcccggctgc gggcatcggc gttcaggttg
     2761 tcgatgtcct aaaaggcgga ccggcggagg cggcggggc
//
LOCUS       DATIFF010000660         1393 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_851654, whole genome shotgun sequence.
ACCESSION   DATIFF010000660 DATIFF010000000
VERSION     DATIFF010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1393
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_851654"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1295
                     /locus_tag="VLD58_09790"
     CDS             <1..1295
                     /locus_tag="VLD58_09790"
                     /inference="COORDINATES: protein motif:HMM:NF012609.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PEP-utilizing enzyme"
                     /protein_id="HSB54638.1"
                     /translation="ERWKATNPAIEPDERLLAGVRELALADARYWFACSLMIGRAKLT
                     DAILGRFLTLAAPGRRLTSGMFLRGFPSPTVDAETELEGLAEHLRDSDELRTLVGATP
                     AAELLDSLAGRPAGRRWLTAFSRYLDRYGHQIYNLDFVVPTQAGDPLPVLISLKTMTQ
                     RPSHDPRARQRAIIAERDTLVDATARSLGPLRRRLLGVLLGWAQRCGPDREQALFYMG
                     AGWPTLRRLALELGRRLAETGSLRTAEDIFFLQTSELRTAISAREAGRAEPELASVAH
                     QRRELRDARKRLHPPPVVPQGYKLRFGPFDMSAFETQRRNVLEGTTLRGFAVSPGRTT
                     AAASVILSPADFSRMEPGTILVCPTTTPAWTPLFAQAHGLVTDVGGVLAHGSIVAREY
                     GIPAVLGTGSASRRIRHGQRITVDGDQGLVILEPDRAD"
BASE COUNT          217 a          499 c          468 g          209 t
ORIGIN      
        1 ccgagcgatg gaaggcgacc aacccggcaa tcgaacccga cgaacgcctc ctggcggggg
       61 tgcgcgagct cgcgctggcc gatgcccgct actggttcgc ctgcagcctg atgatcggga
      121 gggccaagct gacggatgcc atcctgggcc gcttcttgac cctcgcggcg cccggacgcc
      181 gcttgaccag cggaatgttt ctgcgtggct ttccctctcc gacggtggac gccgagaccg
      241 agctggaggg attggctgag cacctcaggg actcggacga gctacggacc ttggtaggcg
      301 ccacgccagc tgcggaactg ctcgactcgc tcgccggcag acctgccgga aggcggtggc
      361 tcaccgcctt ctcccgctac ctcgaccggt acggtcacca gatctacaac ctggacttcg
      421 tcgtcccgac tcaggcgggc gacccgctgc ccgtcctcat cagcctcaag acgatgaccc
      481 agcggcccag tcatgaccca cgtgctcgtc agcgggccat catcgccgaa cgagacaccc
      541 tcgtggacgc gacggcgagg tccctgggac cactgcgtcg tcgcctgctg ggggtgctgc
      601 tcggctgggc ccaacgctgc ggacccgacc gggagcaggc gctgttctac atgggcgccg
      661 gctggcccac cctgcggcgg ttggcactgg agctgggacg ccggctggcc gagaccggat
      721 cgctgcgcac ggccgaggac atcttcttcc tgcagacctc cgagctacgg acggccatct
      781 cggcgcggga ggctggacga gccgaacccg agctcgcatc cgtggcgcac cagcgccgcg
      841 agctgcgcga cgcccggaag cgcctgcacc cgccgccggt ggtgccccag ggttacaagc
      901 tgcggttcgg tccgttcgac atgtcggcgt tcgaaacaca gcggcgcaac gtcctggagg
      961 gcaccacgct gcggggcttc gccgtaagcc caggccggac gactgccgcc gccagcgtca
     1021 tcctttcgcc ggccgacttc tcccggatgg agcccggcac gatcctggtg tgcccgacca
     1081 cgacgccggc ctggacgccg ctctttgcgc aggcgcacgg cctcgtgacc gatgtcggcg
     1141 gggtcctggc ccacggctcg atcgtggcac gcgagtacgg catccccgcc gtgctcggga
     1201 ctgggtccgc gagccggcgg atccgccatg gccagcgcat caccgtggac ggagaccagg
     1261 ggctggtgat cctggaacct gatcgagctg actgaaccgg cgaagccgaa gcgcccgctc
     1321 ctgccgatga gtgaccgaag atcacgccgc cgagaactag catcgaccgt gggttgccga
     1381 ccatctcgat agt
//
LOCUS       DATIFF010000661         1530 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1621276, whole genome shotgun sequence.
ACCESSION   DATIFF010000661 DATIFF010000000
VERSION     DATIFF010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1621276"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(167..862)
                     /locus_tag="VLD58_09795"
     CDS             complement(167..862)
                     /locus_tag="VLD58_09795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54639.1"
                     /translation="MRTDLPAAHTALPRRRAGVRSAGLTALASLTLVGTASAQKTVAA
                     AEGQPFGPLTTMSAEEQTRIALSTAPMEVSSSASVYILTAKGYVEARKGTNGFTCMIE
                     REMLETIEPVCYDAEGTATTVPARFYREELRAKGLSEAEVKRWLALGYKSGRLKAPRK
                     PGLVYMLARENWAWNSFAKKFHAGPPHYMLYAPYATQESVGGAPSAQVPFVLWPGQPD
                     ALIIIMAADNPLH"
     gene            complement(879..1229)
                     /locus_tag="VLD58_09800"
     CDS             complement(879..1229)
                     /locus_tag="VLD58_09800"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSB54640.1"
                     /translation="MSPNQGGAALKLPDAAPLFAALGDATRLHLLGRLSAGGPLSITR
                     LSEGTGVTRQAITRHLYALGDVGLVSHARKGRERVWDLNRERLDRAKRYLDQISAQWD
                     DAAERLRAFVEDQE"
     gene            complement(1219..>1530)
                     /locus_tag="VLD58_09805"
     CDS             complement(1219..>1530)
                     /locus_tag="VLD58_09805"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HSB54641.1"
                     /translation="SVRGRLTVPGYEHVTLELLIERIEAERYFAYRWHPGAVDPAVDY
                     SAEPTTLVEFTLDETEGGTTVTVVESGFDRIPPGRRDEAFRMNNKGWDGQMKNLTQYV
                     A"
BASE COUNT          223 a          538 c          503 g          266 t
ORIGIN      
        1 ctcgcccgcg atctcaagca cgaccgcgat gtggccagca aggtcatccg cccggcgtat
       61 ccgccgtcat cgggcccgag cggttcctgc gggagatcga gaccaccgca caactctggc
      121 ggcgctggtc gagcggtgag ataaccacca acgccgcctc gaagtgtcag tgaagcgggt
      181 tgtcggcggc catgatgatg atcaacgcgt ccggctgccc cggccaaagc acgaagggca
      241 cctgggcgct cggcgcaccg ccgacgctct cttgcgtggc gtacggcgcg tagagcatgt
      301 agtgcggtgg ccccgcgtga aacttcttcg cgaaggaatt ccaggcccag ttctcccgcg
      361 ccagcatata gaccaggccc ggcttccgcg gcgccttgag ccggccggac ttgtacccca
      421 gcgcgagcca ccgtttcacc tcggcctcgg aaagcccctt ggcccggagc tcctcccggt
      481 agaagcgggc cggcaccgtg gtagccgttc cttccgcgtc gtagcacacc ggctcgatcg
      541 tctccagcat ctcccgctcg atcatgcagg tgaaaccgtt ggttcccttc ctcgcttcca
      601 cgtatccctt tgcggtcagg atgtagaccg aggcactgct cgaaacctcc atcggcgccg
      661 tgctcagggc gatgcgcgtc tgctcctcag cgctcatcgt ggtcagcggc ccgaacggct
      721 gcccttcggc cgccgcgacg gtcttctggg ccgacgcagt gcccacgagc gtcaggctgg
      781 ccagggcagt gagtccggcg gagcggacgc ccgcgcgccg ccggggtaat gctgtatgtg
      841 ctgcaggtag atcggtacgc atggtttcct cttgatggtc attcctggtc ttcgacgaat
      901 gcccgcaggc gctccgccgc gtcatcccac tgcgccgaga tctggtccag gtagcgcttc
      961 gcgcggtcca accgttcccg gttgaggtcc cacacccgct cccggccttt gcgtgcgtga
     1021 ctcacgagac ccacatcgcc gagggcgtag aggtggcggg tgatcgcctg gcgggtcacg
     1081 ccggtgccct cgctgagccg ggtgatggag agcggcccgc cggcggagag ccggcccagg
     1141 agatggagtc gcgtcgcgtc gcccagcgcg gcgaacaacg gcgccgcgtc gggcaacttg
     1201 agcgcggcgc cgccctggtt aggcgacata ctgcgtgagg ttcttcatct gtccgtccca
     1261 tcccttgttg ttcatccgga acgcctcgtc gcggcgcccg ggcgggatgc ggtcgaaccc
     1321 ggactcgacc acggtcaccg tggttccccc ctccgtttcg tccagcgtga actccaccag
     1381 cgtggtgggc tcggcgctgt agtcgacggc cgggtcgacc gcaccggggt gccagcggta
     1441 ggcgaagtac cgctccgcct cgatccgctc gatcagcagc tccagcgtca cgtgttcgta
     1501 gcccgggacg gtgaggcggc cccggaccga
//
LOCUS       DATIFF010000662         1062 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1621342, whole genome shotgun sequence.
ACCESSION   DATIFF010000662 DATIFF010000000
VERSION     DATIFF010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1621342"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..853)
                     /locus_tag="VLD58_09810"
     CDS             complement(<1..853)
                     /locus_tag="VLD58_09810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54642.1"
                     /translation="MTPCLAQPLRAQEPIDTAVNRRIRDEAMHHSAVLSTAIGLSDLS
                     PPRLAGSPGYLAAARWARDRLRHWNISSARLEAWGRSTPSWVLDRYALEMVAPWYLNL
                     TAFPRAWSPATPAPVTGPVIVVRIEADSDLARYAGKLRGKVVLNGRLEPVTRSSAPLT
                     RFTDSELDSLSRLTEQGSPANAAEDIEPWREQLAWRRRMSAFLRREGALALVEPSGVE
                     TALRADGWFDYPGTPWTGVPSFIVSRDHFNRLLRLSAAGQPVRVSALLRAHTVRPDSV
                     GYNLIAEI"
BASE COUNT          185 a          335 c          395 g          147 t
ORIGIN      
        1 gaatctcggc gatcaggttg tagccgactg aatcgggccg cacggtgtgg gcccggagca
       61 gggctgaaac ccgcaccggc tgcccggcgg cactgagacg gagaaggcgg ttgaaatggt
      121 cgcggctgac gatgaagctc ggcaccccgg tccacggggt tcccggataa tcgaaccacc
      181 catcggcccg gagagcggtc tcgaccccgc tcggctcgac cagcgccagg gcgccttcgc
      241 gcctgaggaa ggcagacatg cgccggcgcc aggcgagctg ttcacgccag ggctcgatat
      301 cctcggccgc attggccgga gagccctgtt cggtcagccg gctcaggctg tcgagctcgc
      361 tgtccgtgaa gcgggtgagc ggcgccgacg agcgcgtcac cggctcgagt ctgccgttga
      421 ggactacctt gcccctgagc ttgccggcgt aacgggccag gtcgctatcg gcctcgatcc
      481 tgaccacgat gacggggccg gtgacggggg ccggcgtggc cgggctccag gcccgtggaa
      541 aggccgtgag attgagatac cagggcgcca ccatctcgag cgcatagcgg tcgagcaccc
      601 aactcggcgt actccggccc caggcttcga ggcgagccga ggagatgttc cagtggcgga
      661 gccggtcacg ggcccagcgg gcggcggcga gatagccggg tgaaccggcc agccgggggg
      721 gcgagagatc ggagaggccg atcgcggtgg agagcaccgc ggagtggtgc atggcctcgt
      781 cgcgaatgcg ccggttgacc gcggtgtcaa tcggctcctg cgcccggagc ggctgggcga
      841 ggcagggtgt catgaggaag aaggacaacc agcaggtcaa ccggacggac ggtgccaagg
      901 ggactccggt ggaggcgagt gaaaggcccg ggcaacataa ggaaaaccgg gaggccccgg
      961 caagttgaca gacgcgttgc ccggtgccta aatccctccc tcacgaaggc cctcgcctcc
     1021 tctctctgga gcggtccgtg tccgattccg tcagtcgccg ga
//
LOCUS       DATIFF010000663         2836 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2237423, whole genome shotgun sequence.
ACCESSION   DATIFF010000663 DATIFF010000000
VERSION     DATIFF010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2836
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2237423"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="VLD58_09815"
     CDS             complement(<1..182)
                     /locus_tag="VLD58_09815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54643.1"
                     /translation="MSQAGPLSPRVRAAVEAAVVRVAGSWNDLRADAASADEVAGHAA
                     AVGAAVLALIVVFYFF"
     gene            complement(179..1705)
                     /locus_tag="VLD58_09820"
     CDS             complement(179..1705)
                     /locus_tag="VLD58_09820"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSB54644.1"
                     /translation="MGSSLAQSSPHAAPAGSESAARDPLSIPADVKASIRVLVVDDER
                     TLRESCASVLQMDGYNVTLIGRGEEAVDTVKRRKFDIILVDLYMSQVSGLQILQAALE
                     AFKDTIVVVMTGNPSVTSSIEALRAGAWDYLPKPFSATHLQVLIGRASHAVMVSREAQ
                     DLRLQLMKQHGHSDKIALIGISPPFRKAVELARKVAGTDASVFISGESGTGKEVIAQF
                     IHQNSRRAHKPIVPINCAALPEGLLESELFGHRKGSFTGADRDKPGLLETANGGTLFL
                     DELTEMSMPLQAKLLRVIQDGVVRRVGSETMDAQVDVRFISATNRDPQQAVESGALRG
                     DLYYRLRVVPIALPPLRKRPEDIQLLANHFLTHYWHRHRQMPDRTPRLSDESIAFLRS
                     RPWRGNVRELQNAIEHVAVLSEPDQLIEPNDIPVYDEPGSSPVDRPISPTITDEGFHQ
                     AKDRVVAEFEKAYLTRLVTRAGGNMSKAARLGNIDRTTLYRLMDKHNLAQGGPGGEPE
                     "
     gene            2184..>2836
                     /locus_tag="VLD58_09825"
     CDS             2184..>2836
                     /locus_tag="VLD58_09825"
                     /inference="COORDINATES: protein motif:HMM:NF014732.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /protein_id="HSB54645.1"
                     /translation="MAPAAPQLPATAADFAPVPVEEGTEGFQLHRYISALRRYKWLIL
                     LITLLGTGIGVVVTRFLPPEYSVQATIWIESPPARDGPIRAEGLLESYAWVELLKTYT
                     VLDSVVQKERLYLSHGPADSLAFKNFALMDRFRPGSYVLTVDRAHRSITLKTKEGLLV
                     QTATVGDSIGQRVGLAWRPGAEALRAGRSYEFGVVTPRDASQALGAQLGAQMAQDGN"
BASE COUNT          421 a          988 c          956 g          471 t
ORIGIN      
        1 tggaagaagt agaagaccac gatcagcgcg aggacggcgg cgccgaccgc ggcggcatgg
       61 ccggccactt cgtcggcgga cgcggcatcc gcgcgcaggt cgttccagct ccccgcgacc
      121 cgcaccaccg ccgcttcgac cgccgcccgg accctcgggc tcaggggccc ggcctggctc
      181 actccggctc tccgccgggt ccgccctgcg ccaggttgtg cttgtccatc agacggtaga
      241 gcgtggtccg gtcgatgttc cccagccggg cggccttcga catgttgccc cccgcccgcg
      301 tcacgagccg ggtgaggtag gccttctcga attcggcgac cacccggtcc ttcgcctgat
      361 ggaagccttc atccgtgatg gtcggcgaga tcggccggtc caccggcgac gaccccggct
      421 cgtcgtacac cggaatgtcg ttcggttcga tcagctggtc cggctccgac aggaccgcca
      481 catgctcgat ggcgttctgc agctcccgca cattgccccg ccaggggcgg gaccgcagga
      541 aggcgatgct ctcgtcggag agccgcggcg tccggtcggg catctgccgg tgccggtgcc
      601 agtagtgggt gaggaaatgg ttggccagga gctggatgtc ctcggggcgc ttccggagcg
      661 gcggcagggc gatcgggacc acgcgcagcc ggtagtagag atcgccccgg agggcgccgc
      721 tctcgaccgc ctgctgcgga tcccgattgg tcgccgagat gaagcgcacg tccacctggg
      781 catccatggt ttccgatccc acccgccgca ccacgccatc ctggatgacc cggaggagct
      841 tggcctggag cggcatcgac atctcggtca gctcgtccag gaagagggtg ccgccgttgg
      901 cggtctcgag caggccgggc ttgtcgcggt ccgcgccggt gaacgagccc ttgcggtgcc
      961 cgaagagctc gctctccagc aacccctcgg gcagcgcggc gcagttgatc ggcacgatcg
     1021 gcttgtgcgc ccggcggctg ttctggtgga tgaactgggc gatcacttcc ttgcccgtgc
     1081 cgctctcgcc gctgatgaag acggacgcgt cggtgccggc gaccttgcgg gcgagttcca
     1141 cggccttccg gaacggaggc gagatcccga tgagggcgat cttgtcgctg tgcccgtgct
     1201 gcttcatcag ctgaaggcgg aggtcctgcg cttcgcgcga gaccatcacg gcgtgggacg
     1261 cccggccgat gagcacctgc aggtgggtcg ccgagaaggg cttcggcagg tagtcccagg
     1321 ccccggcccg gagcgcctcg atgctgctcg tgacgctcgg atttccggtc atcacgacga
     1381 cgatggtgtc cttgaaagct tccagggcgg cctggaggat ctggagcccc gagacctgcg
     1441 acatgtacag gtcgaccagg atgatgtcga acttgcgccg cttgaccgtg tccacggctt
     1501 cctcgccgcg gccgatgagc gtcacgttgt agccgtccat ctgcaggacg ctggcgcagc
     1561 tctcccgcaa ggtgcgctcg tcgtccacca cgagcacccg gatgctggcc ttgacgtcgg
     1621 ccgggatcga gagcgggtcc cgcgcggccg attcggaccc ggcgggcgcg gcatgcgggg
     1681 acgactgagc gagcgaactg cccatgcgga ctctccttag cgccggtgcg cgcaggcgtg
     1741 aactggagcc tttgaaggcc ggtccgggta ccgcccggaa gcaggacctg ttccgcggtc
     1801 tgcgtgaaag accttcacac atgcgccgcc gtcacttgga taccacacgg tgccgcgcct
     1861 gtcaaccaga acagcgtgat atgcgcaaca cctcctgcag gcctcccgca acgaggtgca
     1921 aggtccatgc aacatcgccg gaggccggac ccccgatgcc ggcggtcccc gatatccggc
     1981 agcccgatac ggacttgtga gcggatcgct tgccgcccgc tgactggtcc ttagtttgcg
     2041 gaggcggggg gccgtacccg caagtcgcat gggtacggcc ctcacgaatc cccggaccgg
     2101 gcctatcccg atccgtctga tacctcggag cgtccgacct tatggcccgt aacctggttc
     2161 cctcgaacga gccccctccg cacatggccc ccgcagcgcc tcagctgccc gccaccgccg
     2221 cggacttcgc tccggtgccg gtggaggagg ggactgaggg cttccagctg caccggtaca
     2281 tctcggccct ccgccggtac aagtggctca tccttctgat cactctgctg ggtaccggta
     2341 tcggcgtcgt cgtcacccgg ttcctccccc ccgagtactc ggtgcaggcc accatctgga
     2401 tcgagtcgcc ccccgccagg gacggcccga tccgggccga gggcctgctt gaatcctacg
     2461 cctgggtcga gctgctcaag acgtacaccg tacttgactc ggtggtgcaa aaggagcggc
     2521 tctacctgtc gcacggcccc gcggattcgc tcgccttcaa gaacttcgcg ctcatggacc
     2581 ggttccgccc gggatcgtac gtcctgacgg tggaccgcgc acatcgcagc atcacgctca
     2641 agaccaagga agggctgctg gtccagaccg ctacggtcgg cgactcgatc ggccagcggg
     2701 tcggcctggc gtggcggccc ggcgcggagg ccctcagggc cgggcgctcc tatgagttcg
     2761 gcgtggtgac gccacgcgac gcgtcccagg ctctgggcgc gcagcttggc gcccagatgg
     2821 cccaggacgg gaactt
//
LOCUS       DATIFF010000664         1149 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1162414, whole genome shotgun sequence.
ACCESSION   DATIFF010000664 DATIFF010000000
VERSION     DATIFF010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1162414"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..484)
                     /locus_tag="VLD58_09830"
     CDS             complement(<1..484)
                     /locus_tag="VLD58_09830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54646.1"
                     /translation="MPRSVDAAMLADLGAASAEACFLLELDFEGATQYLTNAGVTVST
                     PAGAEDWNGHTWTAVGGAISCGGTGERWEPGSAMRLGLSAVDPSLLALILQLQYRGRR
                     AKLWWAHWDRAAGTVLSKPLLLFSGNLNDAFDVSHQQNADGSGTMTIETRVSERVSDV
                     G"
     gene            complement(501..>1149)
                     /locus_tag="VLD58_09835"
     CDS             complement(501..>1149)
                     /locus_tag="VLD58_09835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54647.1"
                     /translation="IPGHPGHAAGRGTMSAFLRAIGVKRTTPLVMPASLQSWSQSGKA
                     QTRASLALGRSWTEVYQTFKSTDADGRAFIQWLNQIRRSGETFTISHYLHLTHTGGGS
                     GAARVNGANQTGSTLNVENWSGTDPVMKAGDLLLIAGLSAVRHLTVDAPNLAAGACAF
                     TIDPPILAGQSPSDHAALTYTAVPLTAILVDLQMPSAGPDEYLMDVQASFREALA"
BASE COUNT          176 a          396 c          390 g          187 t
ORIGIN      
        1 gacccacgtc gctcacccgc tcgctcaccc gggtctcgat cgtcatggtg ccgctgccgt
       61 cggcgttctg ctggtgcgac acatcgaagg cgtcgttcag gttgcccgaa aacagcagga
      121 gcggcttcga gagcacggtc cccgccgccc ggtcccaatg cgcccaccag agcttcgccc
      181 gccgaccccg gtattggagc tggaggatca gagctaggag actcgggtcc acggccgaga
      241 ggccgagccg catggccgat cccggctccc agcgttcccc cgtgccaccg caactgatcg
      301 ccccgcccac ggcggtccag gtgtgcccgt tccagtcctc ggccccggcc ggcgtggaga
      361 cggtgacgcc ggcattggtc aggtattggg tcgcgccctc gaagtcgagt tccaggagga
      421 agcacgcctc ggcgctggcg gcgccgagat cggcgagcat ggcggcatct acggagcgcg
      481 gcattagtgc ctcaccatgg ctaggccagt gcctcccgga aggacgcctg cacgtccatc
      541 agatattcgt ctgggcccgc cgagggcatc tgcaaatcca cgaggatggc tgtcagggga
      601 acggcggtgt aggtcagtgc cgcatgatcg ctcgggctct gacccgcgag gatgggcggg
      661 tcgatggtga aggcgcaggc gccagcggcg agattgggcg catcaacggt caggtgccgc
      721 acggcgctca gacccgcgat caggagcagg tcgcccgcct tcatcacggg atcggtcccg
      781 ctccagttct cgacattgag cgtgctcccg gtctggttcg ccccattcac ccgcgccgcg
      841 ccactcccac cgcccgtgtg cgtgaggtgc aggtaatggc tgatggtgaa cgtctccccg
      901 ctccggcgga tctggttgag ccactggatg aacgcccgcc cgtccgcgtc cgtactcttg
      961 aacgtctggt agacctcggt ccagctccgg cccagggcga ggctggcccg agtctgcgcc
     1021 ttccccgact gcgaccagga ctggagcgag gcgggcatca cgagtggcgt ggtgcgcttg
     1081 accccaatgg cgcggaggaa cgcgctcatc gtgccgcggc cagccgcatg cccgggatgt
     1141 cctggaatg
//
LOCUS       DATIFF010000665         2554 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1008579, whole genome shotgun sequence.
ACCESSION   DATIFF010000665 DATIFF010000000
VERSION     DATIFF010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2554
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1008579"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..679
                     /locus_tag="VLD58_09840"
     CDS             <1..679
                     /locus_tag="VLD58_09840"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSB54648.1"
                     /translation="HARVQEAAEVARGRLAQLIGWKRDAPMPALGGSLADGLTPDRSP
                     APDSSVMLTPRIRSALHDSAALSFRAQSAARAGVPLPTLQVGADWDDPTATHSPLAVL
                     GFSLPLPVWQHGGGATAVARAEANRSSALLAEVRAAEAQRLSETAIRLRHARSRALVA
                     RDSLLPLARRVRERAALAYQAGESGVTELLDALRAERDVSAEAVDDLLTWQEARAAWR
                     QARGYGE"
     gene            676..1698
                     /locus_tag="VLD58_09845"
     CDS             676..1698
                     /locus_tag="VLD58_09845"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSB54649.1"
                     /translation="MKRYRCILLLLAAGCGKSDSTDDAGAGVTVGVQAAALDSISEVL
                     TLTGQLTAMPGGSAVLAAPADAIVQSIRVQLGDRVGRGQLLIQLDAPELTTAAQSLTA
                     QARSDSMDLERQRGLYQQGIAARRQLEEREAAAASSRAQADAAMELLRRARVTSPISG
                     GIQRLLVQVGERVSAGQTLIEVVNGTGLDFHAGVPAAALNRVRLGQAVALQGEGLDRP
                     VAGRLVAIAPAVDSSSGMGEVVVRAPLAGGLRVGSGATGALQLRVLRDVLVISDSALV
                     PGEGSLQVFVVGADSIARARAVTVQVRNAGRAAVSGEIHQGDRVVVSGAYGLTDSTRV
                     VPIATP"
     gene            1695..>2554
                     /locus_tag="VLD58_09850"
     CDS             1695..>2554
                     /locus_tag="VLD58_09850"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSB54650.1"
                     /translation="MSIGRFALRHRSAIYFATLLLAAAGGYALFNLPAGIYPEVVFPR
                     IVILAKAGTFEPRDMVVAVTRPIEEGLTGILDLRRIRSRTVRGATELNLDFRPGADMP
                     VALQQVQARLATLQGSLPAGLETTAERLTPSVFPMVQFELTGADPIRLRELADFTIRP
                     RWARIPDVGAVEVQGGLVREIAVVLDPGRLVAHHISATEVADRIRAGNQIEAVGRIDR
                     DYQQRSVLVSAAARSAEAVGAVVVQREGVAPLRVSDLGKVRYDGADRFDLVAGNGRPA
                     ALINVSRQPGG"
BASE COUNT          370 a          867 c          927 g          390 t
ORIGIN      
        1 tcacgcccgg gtccaggaag cggccgaggt cgcccgcggc cgtctcgcgc aactgatcgg
       61 ctggaagcgc gacgcgccga tgccggcgct cggcggcagc ctcgccgacg gcctgacccc
      121 ggaccggagc ccggcacccg actcctcggt gatgctcaca ccccgcattc gctccgcgct
      181 gcacgattct gccgccctct ctttccgtgc tcagagcgcg gcccgggccg gagttccttt
      241 gccaacactg caggtggggg ctgactggga cgaccccaca gccacccatt ctccactggc
      301 agtgctgggc ttctctcttc ctttgcccgt ctggcagcac ggcggcggcg caaccgccgt
      361 ggcgcgggcc gaggcaaacc gcagcagcgc gttgctggcc gaagtgcgtg ccgccgaggc
      421 acaacgtctg tccgagacag ccattcgtct ccgccacgcc aggtcgcgag cactggtcgc
      481 ccgggattcg ctcctgccgc tggcccgccg ggtgcgcgag cgggcggcgc tggcctacca
      541 ggcaggtgag tccggagtca ccgaactgct cgatgccctg cgtgccgagc gggatgtctc
      601 ggcggaagcg gtagacgatc tgctcacatg gcaggaagcg agggccgcgt ggcgccaggc
      661 gagagggtac ggcgaatgaa acggtaccgg tgcatcctgc tccttctggc cgcaggctgc
      721 ggcaagtccg actcgaccga cgatgccggc gcaggcgtta ccgtcggagt ccaggctgcg
      781 gccctcgact ctatcagcga ggtcctcacg ctgacgggcc aactgactgc catgcccggc
      841 ggcagcgccg tgctcgctgc cccggccgat gcgatcgtgc aatcgatcag ggtgcagctg
      901 ggtgatcgag tcggacgggg gcaactgctg attcagctcg acgcccccga gctcaccacc
      961 gcggcgcaga gtctgaccgc gcaggcccgt tccgactcga tggacctgga gcgccagcgg
     1021 ggactctacc agcaggggat cgcggcccgc cggcaactgg aagagcggga agcagccgcg
     1081 gccagctcac gggcccaggc cgacgccgcc atggaactgc tgcgccgagc ccgagtcacc
     1141 agcccgatct ccggcgggat ccagcggttg ctggttcagg tcggggagcg ggtgtcggct
     1201 ggacagacgc tcatcgaagt cgtcaacgga acgggactcg acttccacgc cggagtcccc
     1261 gcagcggcac tgaaccgggt gcgtctcggc caggcggtcg cgctgcaggg agagggactg
     1321 gaccgcccgg ttgcgggccg tctggttgcg atcgcgccgg cggtcgactc gagcagcggc
     1381 atgggagagg tggtggtgcg ggcgccgttg gccgggggcc tccgggtcgg cagcggcgct
     1441 actggtgcgc tccagctgcg cgtcctgcgt gacgtgctgg tgatctccga ctcggccctg
     1501 gttcccggcg aaggtagcct gcaggtgttc gtcgtgggag cagactcgat cgcccgcgcg
     1561 cgcgcagtga ccgtgcaggt gcgcaacgcc ggccgcgcgg cggtgagtgg tgagatccac
     1621 cagggagacc gggtagtggt gagcggggcc tacggcctga ccgacagtac ccgcgtagtt
     1681 ccgatcgcca cgccatgagc atcggtcgtt tcgcactcag gcaccgttcg gccatctact
     1741 tcgccaccct gctgctggcg gcggcaggag ggtacgctct cttcaatttg ccggcgggga
     1801 tttaccccga agtggtcttt ccccgtatcg tgatcctggc gaaggcgggg accttcgagc
     1861 cacgcgacat ggtggtcgcc gtcacccggc cgatcgaaga aggcctgacc ggcatcctgg
     1921 acctgcggcg gatccggagc cgcacggtgc ggggggcgac cgagttgaac ctggactttc
     1981 gcccgggcgc ggacatgccg gtcgcgctgc agcaggtcca ggcgcgactg gccaccctgc
     2041 agggcagtct cccggccggt ctcgagacca ccgcggagcg actgactccc tcagtcttcc
     2101 cgatggtgca gttcgagctg acaggagccg atccgatccg gctccgggag ctggccgact
     2161 tcaccatccg gccccggtgg gcccgcatcc ccgatgtcgg cgcggtcgag gtccagggtg
     2221 gactggtccg cgagatcgcg gtggtcctcg atccgggccg gctggtcgcc caccatatca
     2281 gcgcgaccga agtggccgac cggatccggg ctggcaacca gatcgaggcg gtcggccgga
     2341 tcgaccggga ttaccagcag cggagcgtcc tggtatcggc cgccgcgcgc agtgccgagg
     2401 cggtgggagc ggtcgtggtg cagagggagg gggtcgctcc gctccgggtc tccgatctgg
     2461 ggaaagtccg gtacgacggg gctgaccgtt tcgatctcgt ggcggggaac ggaaggcctg
     2521 ccgcgttgat caacgtctcg cgccagccag gcgg
//
LOCUS       DATIFF010000666         1801 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_85392, whole genome shotgun sequence.
ACCESSION   DATIFF010000666 DATIFF010000000
VERSION     DATIFF010000666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1801
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85392"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..731
                     /locus_tag="VLD58_09855"
     CDS             <1..731
                     /locus_tag="VLD58_09855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54651.1"
                     /translation="LPADPDSLARLRDLVFKRQLRGLKDIANHALVVEQSAIAPLTMG
                     IIHYKRRREIQEAMTTFVYDEAKHSAVFRRFMADKLDAKERIPRGIIRNGDRYLWIAR
                     LMPSGAVFLAVIVEAIGGAYLEFFGQEAHMPDPLFRSICRTIAERDEKRHMELCSATY
                     NELYRRGSRWERLRNNVALRSLLKSAYGDKTEDHQLIQACRAFGLESDTLYRFVAGRL
                     SRQLTTVGMFVPWESFLEFLPKPA"
     gene            complement(728..1438)
                     /locus_tag="VLD58_09860"
     CDS             complement(728..1438)
                     /locus_tag="VLD58_09860"
                     /inference="COORDINATES: protein motif:HMM:NF013786.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HSB54652.1"
                     /translation="MSLGPGEIDVLSFAVDLPPPTISELAALLADDERARADRFRFDR
                     DRGRFIAARGLLRTILGHYADREPRELRFEYGPFGKPELQPEPGGTRLRFNLSCSEGL
                     GVLGIRRDEAIGIDVERLRALDDAPAISRRMFAAEEHAALMARPEPERSRIFFGYWTR
                     KEAVLKSLGVGLSGPMHGFVLPPEPSPTMEPVRVCGEGEAALQWLCPLPAPLPGFVAA
                     LATAAEPGGVRCRPWPFS"
     gene            complement(1435..>1801)
                     /locus_tag="VLD58_09865"
     CDS             complement(1435..>1801)
                     /locus_tag="VLD58_09865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54653.1"
                     /translation="GAFLDSTLDQFAETGKYAGIAWYLWPSRWMTITTVLAVTGSLLV
                     SYARARGASLGVDFTGGLMPRAERVVLLALGALFDSTVTELLGWAPGTVLSGAVVIIA
                     AGTLGTAVYRTVRIARALR"
BASE COUNT          306 a          631 c          617 g          247 t
ORIGIN      
        1 cgctccccgc ggacccggac tcgctggccc ggctccgcga tctggtcttc aagcgccagc
       61 tccgcgggct caaggacatc gccaatcacg cgctcgtcgt ggaacagagc gcgatcgctc
      121 ccctgaccat ggggatcatc cactacaagc gccgccgcga gattcaggag gcgatgacga
      181 ccttcgtgta cgacgaggcc aagcactcgg ccgtcttccg ccgattcatg gccgacaagc
      241 tggacgccaa ggaacggatt ccacggggga tcatccggaa cggagaccgg tacctctgga
      301 tcgcccggct gatgccgagc ggggcggtgt tcctggcggt gatcgtcgag gcgatcggcg
      361 gggcctacct ggagttcttc ggccaggagg cccacatgcc cgacccgctg tttcgcagca
      421 tctgccgcac cattgccgag cgggacgaga agcggcacat ggagctgtgc tcggccacct
      481 acaacgagct gtatcgtcgc gggagccggt gggagcgact tcgcaacaac gtcgcgctcc
      541 ggagcctgct caagtcggcc tatggcgaca agaccgagga ccaccagctg atccaggcct
      601 gccgggcgtt cggtctggaa tccgataccc tctaccggtt cgtggccggc cgcctgagcc
      661 ggcagctgac caccgtcggg atgttcgtcc cctgggagag tttcctggag ttcctgccga
      721 agcccgccta actgaagggc cagggccggc accgcacccc gccgggctcg gcggccgtgg
      781 cgagggcggc cacgaacccc ggcagcgggg ccgggagcgg gcacagccac tggagggccg
      841 cttcgccctc gccgcacacg cgcaccggct ccatcgtggg ggatggctcg ggcggcagca
      901 cgaatccgtg catcgggccg ctgagtccca cccccagcga cttgagcacg gcctccttcc
      961 gggtccagta gccgaagaag atcctgctgc gctccggctc cggtcgtgcc atcagcgcgg
     1021 catgctcctc cgcggcgaac atccgccgcg agatcgcggg ggcgtcatcc agcgcccgca
     1081 ggcgctcgac atcgatgccg atcgcctcgt cgcgacggat ccccagcaca ccgagcccct
     1141 cggaacagga gaggttgaac cggagccggg tgccgccggg ctccggctga agctcgggct
     1201 tgccaaaggg gccatactcg aagcgaagct cgcgcggctc ccggtccgcg tagtgtccca
     1261 ggatggtccg gaggagtccc cgggcggcga tgaagcgccc ccggtcgcgg tcgaatcgga
     1321 agcggtccgc gcgggcccgc tcgtcatcgg cgagcagcgc cgccagttcg gaaatcgtgg
     1381 gcggaggcag atcgacggca aaggagagca catcgatttc gcccggcccg aggctcatcg
     1441 caacgctctg gcaatccgga cggtgcggta gacggcggtg cccagggtcc cggcggcgat
     1501 gatgacgacc gcgccggaca gcaccgtgcc cggcgcccag cccagcaatt ccgtcaccgt
     1561 cgagtcgaac agagcgccca gggcgaggag gacgacccgc tcggcgcgcg gcatcagccc
     1621 gccggtgaaa tcgacgccca gggacgctcc gcgcgcccgg gcatagctca ccagcagcga
     1681 cccggtgacg gccaggaccg tggtgattgt catccaccgg gacggccaga gataccaggc
     1741 aatcccggca tactttccgg tttcggcgaa ctggtcgagc gtcgaatcga ggaaggcgcc
     1801 g
//
LOCUS       DATIFF010000667         5845 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_392166, whole genome shotgun sequence.
ACCESSION   DATIFF010000667 DATIFF010000000
VERSION     DATIFF010000667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5845
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_392166"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..630)
                     /locus_tag="VLD58_09870"
     CDS             complement(<1..630)
                     /locus_tag="VLD58_09870"
                     /inference="COORDINATES: protein motif:HMM:NF021514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HSB54654.1"
                     /translation="MSQPPAPLAGERDLRRLLGGMQAVLDPASYVFCRMREGLATDRL
                     TARGIFHESEGVTLIVEQGEAERSGLTPEFVARRIELTVHSDLNAVGFIARIATELAA
                     AGIPCNAVAALYHDHLYVPAGLAERALAVLTALEREAREDQPGVLYEVRVRVDHAIAV
                     EWLAWMEAVHLPEIMATGCFRRCTVTRAAAEVADEREGFVLEYLARSPES"
     gene            complement(627..1643)
                     /locus_tag="VLD58_09875"
     CDS             complement(627..1643)
                     /locus_tag="VLD58_09875"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB54655.1"
                     /translation="MMLRSTRLSLIPATLDLVRADLAGPAQLAAALGHPVPSSWPPEL
                     YDDPAKEWTIRRLETDPSQAAWLLYYVVADDGHLAGTAGYKGGPDGNGVVEIGYGILP
                     EYQRKGLATEAAGALIENAFREPSVRAVTAETLPHLVSSIGVMENNGLRLIGEGSEPG
                     VIRFELTRRDFEAGRRRIPPHLRYFLRMLGHQAWADHRALAAIEAGGSGLDAALKLLG
                     HILGAEHVWLARLTARPTEVAVWPQLSPAQCRSLVEANELGYRDFLFSLGEPSALRRV
                     VEYRNSAGEELATEVGDILTHLFLHGAYHRGQVAQQLRLAGHAPVPTDYIAFVRATPA
                     AVRR"
     gene            complement(1654..2127)
                     /locus_tag="VLD58_09880"
     CDS             complement(1654..2127)
                     /locus_tag="VLD58_09880"
                     /inference="COORDINATES: protein motif:HMM:NF039391.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6265 family protein"
                     /protein_id="HSB54656.1"
                     /translation="MGSRSAVLAATLLVTAGGLEAQQVNTLAWMAGCWRQLDAGVTVE
                     EVWLAPAGGTMIGLSRSVEDDSTRSTEHMVIRPAASGGLVYEAAPSGQEPGAFLAATV
                     TDSLVIFENLTHDFPQQIRYSRLPGDSLLAVVSGTVRERLRTITFRYSRSTCPGS"
     gene            complement(2120..2527)
                     /locus_tag="VLD58_09885"
     CDS             complement(2120..2527)
                     /locus_tag="VLD58_09885"
                     /inference="COORDINATES: protein motif:HMM:NF018574.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HSB54657.1"
                     /translation="MSLTVLIVLGFLGVYLMLRGGQREGITRHPAPDADASTIEQLAQ
                     AGSDLTRPHTIEFFLYLPEHAAAEAVASELAGEGYTTELSQEEQATDWLCLATRVMVP
                     DMAALRACRERLTALAESHQGVYDGWGTEVEDG"
     gene            complement(2530..2856)
                     /locus_tag="VLD58_09890"
     CDS             complement(2530..2856)
                     /locus_tag="VLD58_09890"
                     /inference="COORDINATES: protein motif:HMM:NF013222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HSB54658.1"
                     /translation="MGRALSSYQRIYRAVERIPRGRVATYGDVAAMAGLPGRARQVGY
                     ALHALPDGSPVPWHRVINATGRISLPMAAGGLEQRLRLLAESVPVDQGGRVRLTEFRI
                     PSRRRG"
     gene            complement(2856..3368)
                     /locus_tag="VLD58_09895"
     CDS             complement(2856..3368)
                     /locus_tag="VLD58_09895"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB54659.1"
                     /translation="MVIRRARAADAAALASLMERTFSDAFGPANRPEDLATHIARSYS
                     PEIQGRELADPDHTILLADAGGVPAGYAQLRTGEAPAEVTGPAPLQLWRFYVDRGWHG
                     KGLAQALMVAARRAARERGARTLWLGVWEENPRGIAFYRKEGFREVGRFLFHVGNDPQ
                     RDLIMAHALD"
     gene            complement(3380..3880)
                     /locus_tag="VLD58_09900"
     CDS             complement(3380..3880)
                     /locus_tag="VLD58_09900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54660.1"
                     /translation="MTDEAPQSEAPTEAQAAGHPSLAPVAEAALQMVVSRELVHDARS
                     LMKIGPGLYEMELLTGTCRQGFRYHPTLAIAQFARARMLAAIRSMELDWAIVTQARLS
                     LKVTLEEKDPAKGYKPLMLLGRYEGIYVLCRTEAVVSIATVNGSWTANGRGAIDWPRD
                     WGNLGL"
     gene            complement(3938..4294)
                     /locus_tag="VLD58_09905"
     CDS             complement(3938..4294)
                     /locus_tag="VLD58_09905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54661.1"
                     /translation="MIRSPIIIDAKGSLFVFNSLAQALRELSPQDVREGRFPVAYDAE
                     GRLLRVEVRMRERKILGIWREVREEVHIVAYEHIPTHELALRELLLRFIQPSGASLEF
                     AHPFDGLLRTIPARAS"
     gene            complement(4356..5660)
                     /locus_tag="VLD58_09910"
     CDS             complement(4356..5660)
                     /locus_tag="VLD58_09910"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSB54662.1"
                     /translation="MPFASFKLHPSLLQGIRELGFVRPTPIQADAIPPGLEGKDVLAC
                     AMTGSGKTAAFLLPILHQLIGRQRGTTRALILTPTRELAAQILEDLNDLATHTPLTAA
                     SVFGGVGMGPQEHAFRSGADVLIATPGRLLDHFRHPYARLTGLEFLVLDEADRMLDMG
                     FLPEIRKILRHLPARRQTLFFSATMPPPIRELTREMLKNPVTINLDRQAAPAVGITQA
                     VYPVPQELKSALFKTLLDRGEMKEALVFTRTKHRADRLQKYLAKHGVAAERIHGNRSQ
                     AQRTAALAGFKDGKYRVLVATDIAARGIDVEALGHVVNFDVPVVPEDYIHRVGRTARA
                     EATGDAFTFVAPDEEGDLRAIERAIGKRLPRVTVPDFDYKARVEGQLEVPLAERIAAI
                     RARKAEERARAKAKAERRATQEQRQQPRSPERRHPPRRGRHP"
BASE COUNT          883 a         1960 c         2112 g          890 t
ORIGIN      
        1 ggattcggga gaccgggcca ggtattcgag cacgaacccc tcccgctcat cggccacctc
       61 agcggcggcg cgcgtgacgg tgcagcggcg aaagcacccc gtcgccatga tctcggggag
      121 gtgcaccgct tccatccacg ccagccattc caccgcgatg gcgtggtcca cccgcacccg
      181 gacctcgtac aggaccccgg gctggtcctc gcgggcctcg cgctccagcg cggtgaggac
      241 cgccagcgcc cgctcggcca gccctgccgg cacgtagaga tggtcgtgat acagcgccgc
      301 caccgcattg cacgggattc ccgccgccgc gagctcggtg gcgatccggg cgatgaatcc
      361 aaccgcgttg agatcggagt ggaccgtcag ctcgatgcgg cgcgccacga attcgggcgt
      421 gagcccggag cgctcggcct ccccctgctc cacgatgagg gtgacacctt cgctctcgtg
      481 gaagatgccg cgggcggtga ggcggtcggt ggcaagccct tcccgcatgc ggcagaagac
      541 gtaggaggcg gggtcgagaa cggcttgcat gccgccgagc aggcgccgga ggtcgcgctc
      601 acccgcgagc ggggcggggg gctggctcat cgccgcactg cggccggggt ggcgcggaca
      661 aaggcgatgt agtccgtcgg caccggcgca tgccctgcca gccgcagctg ttgcgcgacc
      721 tgtccccggt ggtaggcgcc atgcaggaag aggtgggtca ggatgtcgcc cacttcggtt
      781 gccagctcct cgccggcgct gttccggtac tccaccacgc gccgaagcgc cgatggttcg
      841 ccgagggaga agaggaaatc ccgatacccc agttcgtttg cctccaccag gctgcggcac
      901 tgcgcgggtg acaactgggg ccagacggcc acctcagtgg gacgcgccgt caggcgtgcg
      961 agccagacgt gctccgcgcc caggatgtgg cccagcagct tgagggcggc atccagcccg
     1021 ctgccgcccg cttcgatcgc ggcgagggcc ctgtgatcgg cccacgcctg gtgaccgagc
     1081 atgcggagga agtaccggag gtgaggtgga atacggcggc gtcccgcctc gaaatcccgc
     1141 cgagtgagct cgaagcggat gacgccgggc tcggagccct cgccgatcag gcggagccca
     1201 ttgttctcca tgacaccgat cgagctcacg aggtgcggca gggtttcggc agtcaccgct
     1261 cgaacggagg gctcgcgaaa ggcattctcg atcagcgcac cggccgcctc ggtcgcgagg
     1321 cctttgcgct ggtactccgg gagaatgccg tatccgatct cgacgacacc gttgccgtcg
     1381 gggccgcctt tgtagccggc ggtcccggcc aggtgaccgt cgtcggccac cacgtagtag
     1441 agcagccagg ccgcctgtga aggatcggtc tcaagcctcc ggatggtcca ctccttcgcc
     1501 ggatcatcgt agagctccgg gggccaggag gacggtaccg ggtgtcccag cgcggcagcc
     1561 agctgggccg gcccggccag gtcggcgcgg acgagatcaa gagtggcggg gatcagcgag
     1621 aggcgggtgg agcgtagcat catgcgagga gggtcacgag ccggggcagg tgctccggct
     1681 gtatctgaag gtgatggtcc ggagccgctc gcgcactgtg ccgctcacga ccgcgaggag
     1741 ggagtcgccc ggaagccggc tgtagcggat ctgctgcgga aaatcgtggg tcaggttctc
     1801 gaagatgacc agcgaatcgg tgacggtggc ggcgagaaat gcgcccggct cctggcccga
     1861 gggcgccgcc tcgtagacca ggccgccact cgcggccggg cggatcacca tatgctcggt
     1921 gctgcgggtc gaatcgtcct cgacgctgcg gctcaagccg atcatcgtcc ctcccgccgg
     1981 cgcgagccag acttcctcga ccgtgacccc cgcgtccagc tggcgccagc aacccgccat
     2041 ccaggccagg gtgttcacct gctgcgcctc cagcccgccg gcggtgacca ggagggtcgc
     2101 ggcaaggacg gcactacggc tacccatctt ccacctcggt tccccagcca tcatagaccc
     2161 cttgatgcga ctcggccagc gcggtgaggc gttcgcggca ggcgcgcagc gctgccatgt
     2221 ccggtaccat cacccgggtg gcgagacaaa gccagtcggt ggcctgctcc tcctggctga
     2281 gttcggtggt atagccctcc ccggccagct cgctcgcgac cgcttcggcc gcggcatgtt
     2341 cgggcaggta caggaagaat tctatcgtgt gtgggcgagt gaggtcggag ccggcctgcg
     2401 ccagctgttc tatcgtggag gcgtcggcat cgggggccgg gtggcgggtg atcccttccc
     2461 gctgcccgcc ccggagcatc aggtagacgc cgaggaagcc caggacgatg aggaccgtaa
     2521 gggacatggt cagccgcgcc gccgggaggg aatccggaat tccgtcagcc tcacgcgacc
     2581 tccctgatcg actggtaccg attcggcgag cagccggagc cgctgctcca ggccgcccgc
     2641 ggccatggga agactgatgc ggccggtggc gttgatcacc cggtgccatg ggaccgggct
     2701 gccatcgggc agggcgtgca gcgcgtagcc cacctggcgg gcccggcctg gcagtccggc
     2761 cattgccgcc acgtcgccgt acgtggccac ccggccgcgg ggaatccgct cgaccgcccg
     2821 gtagatccgt tggtaggagg aaagcgcgcg acccatcagt cgagtgcgtg ggccatgatc
     2881 aggtcgcgct gcggatcgtt tcccacatgg aacaggaagc gtccgacctc cctgaaccct
     2941 tccttgcggt agaaggcgat gccgcggggg ttctcttccc agacgccgag ccagagggtg
     3001 cgggctccgc gctcgcgggc tgcgcgcctc gccgccacca tcagggcctg ggccaggccc
     3061 ttcccgtgcc agcctcggtc gacgtagaag cgccagagct ggagcggggc gggtccggtg
     3121 acctccgcgg gagcctcgcc ggtgcggagc tgggcgtagc ccgccggcac ccccccggca
     3181 tcggcgagca ggatcgtgtg gtcaggatcg gccagctcgc gcccctgaat ctcaggcgaa
     3241 taggagcggg caatatgggt cgcgagatcc tcggggcggt ttgccgggcc gaaggcatcg
     3301 ctgaacgtcc gctccatcag gctggcgagt gcggcggcgt cggcggcgcg tgcgcggcgg
     3361 atgaccacgc cgtccggtgt cacagtccga ggttccccca gtcgcggggc cagtcgattg
     3421 ccccccgccc gttcgcggtc cagctgccgt tgaccgtggc gatcgacacg accgcttccg
     3481 tccggcagag gacgtagatc ccttcgtacc ggcccagcag catcagcggc ttgtagccct
     3541 tcgccgggtc cttctcctcg agggtcacct tgaggctgag ccgggcctgg gtcacgatcg
     3601 cccagtccag ctccatgctg cggatggccg cgagcatccg ggcccgggca aactgggcga
     3661 tcgcgagcgt cgggtgatag cggaaaccct ggcggcaggt gccggtgagc agctccatct
     3721 cgtagagtcc cgggccgatc ttcatcagcg accgcgcgtc gtgcacaagc tcgcgcgaga
     3781 ccaccatctg caaggcggcc tcggcgaccg gcgcaagcga cggatgcccc gcagcctggg
     3841 cttcggttgg cgcctcggat tggggggctt cgtcagtcat gagaattcgg tgaccggcgc
     3901 ggggcgggcc ccgccgaacg gtcccgggag gcccgcatta cgatgctcga gccggaatgg
     3961 tccgcagcag gccgtcgaat ggatgggcga actcgaggct cgccccactc ggctgaatga
     4021 agcggagcag gagttcccgc agcgccagtt cgtgggtggg aatgtgctcg taggccacga
     4081 tgtggacctc ctcgcgcacc tcgcgccaga tgccgaggat cttccgctcc cgcatgcgaa
     4141 cttccacgcg aagcaggcgg ccctcggcgt cgtaggccac cgggaagcgg ccctcgcgga
     4201 cgtcctgcgg cgacagctcg cgcagcgcct gcgcgaggct gttgaagacg aacagtgagc
     4261 ccttggcgtc gatgatgatc ggggaccgga tcatgcggcc tgccttgccg agtcggggcg
     4321 tctggtaatg agcctccgaa tcggcctgct gtcaatcagg ggtggcgccc ccggcggggc
     4381 ggatggcggc gctcggggga ccggggctgc tggcgctgct cctgcgtggc ccggcgctcg
     4441 gccttggcct tggcgcgggc ccgctcctcg gccttccggg cccggatcgc ggcgatgcgc
     4501 tcggccaggg gcacttcaag ctgtccttcg acccgcgcct tgtagtcgaa gtccggcacc
     4561 gtcacccggg gaagccgctt gccgatggcg cgttcgatgg cgcggaggtc gccctcctcg
     4621 tccggcgcga cgaaggtgaa ggcatcgccg gtggcctcgg cgcgcgcggt acggcccacc
     4681 cggtgaatgt agtcctcggg aaccaccggc acgtcgaagt tcaccacgtg gcccagcgcc
     4741 tcgacgtcga tgccgcgcgc ggcgatgtcc gttgccacca gcacccggta cttgccgtcc
     4801 ttgaagccgg ccagcgcggc ggtgcgctgc gcctgcgagc gattgccgtg aatccgctcg
     4861 gctgcgacgc cgtgcttcgc caggtatttc tgcagccggt cggcgcggtg cttggtgcgg
     4921 gtgaagacca gggcctcctt catctcgccc cggtcgagca gggtcttgaa gagcgccgat
     4981 ttgagctcct gcggcacggg atagactgcc tgggtgattc ccaccgccgg cgccgcctgg
     5041 cggtcgaggt tgatggtgac cgggttcttg agcatctccc gggtgagctc gcggatcggc
     5101 ggcggcatcg tggcgctgaa gaacagcgtc tgacgcctgg cggggaggtg cctgaggatc
     5161 ttccggatct cggggaggaa ccccatgtcg agcatccggt ccgcctcgtc cagcaccagg
     5221 aactcgagcc cggtgagccg ggcgtaggga tggcggaagt ggtcgagcaa ccggcccggg
     5281 gtggcgatga gcacgtcggc gccactgcgg aacgcatgtt cctgcgggcc catcccgacg
     5341 ccgccgaaca ccgaggcggc ggtgagcggg gtatgggttg cgagatcgtt gagatcctcg
     5401 agaatctggg ccgcgagctc ccgggtcggg gtgaggatca gggcccgggt ggtgccccgc
     5461 tgccggccaa tcagctgatg caggatcggg aggagaaacg cggcggtctt gccgctcccg
     5521 gtcatggcgc aggcgagcac gtccttcccc tcgagcccgg gggggatggc atcggcctga
     5581 atgggagtgg gtcgaacgaa acccagctcg cggataccct ggagcaggct ggggtggagc
     5641 ttgaagctgg caaacggcaa cgcgaagtcc ggctgagtga gccgggaagc tagtcgggcg
     5701 gatgctcagg cagaaggcag cagctgcatc gcgaccggat cgccgacccg caccaggccc
     5761 ggctcgagca cccgcgcgta ccagccgcgc cggcccttca tggtgcggac gaacgacggg
     5821 cccttctcct ggccgacata cggaa
//
LOCUS       DATIFF010000668         1221 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1315917, whole genome shotgun sequence.
ACCESSION   DATIFF010000668 DATIFF010000000
VERSION     DATIFF010000668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1221
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1315917"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(134..>1221)
                     /locus_tag="VLD58_09915"
     CDS             complement(134..>1221)
                     /locus_tag="VLD58_09915"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSB54663.1"
                     /translation="MAGLVEAALREGACGASSGLEYTPGAFASTEELVALCRPLAKRR
                     LPYATHMRNEDDRVLESIDESIAVARGARCPLQISHLKMQGPRNWPKLDQAFARIAAA
                     RKQGLDVAFDRYPYTAYQTGLTNLFPTWSRDGGTTAFLARLDSTDLMPRIKRYTLDKV
                     ELIGGWDNVFIAGLRAEEDSQVVGQRLGSFAAAKGTDPFDLTVALLKRSRGSVGMVGF
                     AMSEEELDRLYAHPQGMVCSDGGAFAVDGPTHRGSPHPRGAGSFPRVVARYVRERKAI
                     TLAQAIYKMSGLPASRLRLRDRGRIAKGMAADVVVFDAATIADTATYQNPFSYAEGVT
                     AVVVNGSIAVREGARGHRRSGKALRPA"
BASE COUNT          186 a          440 c          404 g          191 t
ORIGIN      
        1 ccgcccctcg cgctgatcca ggacatgctg agcgggtcgc agtggttcgg ttatctctct
       61 cacagacacc ctgggatgag gcccagggcc cagccgcacc tttcatccgc ttggcaacag
      121 cacgcaccac ccgtcaggcc ggccgcagcg ccttcccgct gcggcggtgg ccccgggctc
      181 cctcgcgcac cgcgatgctt ccgttcacca cgacagcggt gactccctct gcatagctga
      241 acgggttctg gtaggtcgcc gtatcggcga tagtcgcggc atcgaagacg accacatcgg
      301 ccgccatccc cttcgcgatc cggccccggt cgcggagccg gagccgcgag gcgggaagcc
      361 cgctcatctt gtatatggcc tgggccaggg tgatcgcctt ccgctcccgc acgtagcgcg
      421 caacgacgcg cgggaacgac cccgcgcccc gcggatgggg gctgccgcgg tgcgtgggcc
      481 cgtcgaccgc aaaggcaccg ccgtcgctgc agaccatccc ctgcgggtgg gcgtagagcc
      541 ggtccagctc ctcctcactc atcgcgaagc ccaccatccc gaccgatccg cggctgcgtt
      601 tgagcagcgc caccgtcagg tcgaacggat ccgtgccctt cgccgccgcg aaactgccga
      661 gccgctggcc cacgacctgg gaatcctcct ccgcccgaag cccagcgatg aacacgttgt
      721 cccacccgcc gatcagctcg accttgtcga gggtgtagcg cttgatccgt ggcatgaggt
      781 cagtcgagtc gagccgcgcg aggaaggcgg tggtgccacc gtcacggctc caggtcggga
      841 agagattggt gagcccggtc tggtaggcgg tataaggata gcggtcgaag gccacgtcga
      901 gtccctgctt ccgggccgcc gcgattcggg cgaaggcctg gtcgagcttc ggccagttcc
      961 gcggtccctg catcttgagg tgcgagatct ggagcgggca ccgagccccg cgcgctaccg
     1021 cgatcgactc gtcgatcgac tcgaggaccc gatcgtcctc gttccgcatg tgcgtggcat
     1081 agggcaggcg gcgcttcgcg agcggccggc agagcgcaac cagctcctcg gtggaggcaa
     1141 aggcgccggg ggtgtactcg agtcccgagg aggcgccaca ggcgccctcc cggagcgctg
     1201 cctcgaccag tccggccatc t
//
LOCUS       DATIFF010000669         1717 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1008744, whole genome shotgun sequence.
ACCESSION   DATIFF010000669 DATIFF010000000
VERSION     DATIFF010000669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1717
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1008744"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1717
                     /locus_tag="VLD58_09920"
     CDS             <1..>1717
                     /locus_tag="VLD58_09920"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HSB54664.1"
                     /translation="AWLDLNATAYTAHPYRNPVIGWKSDMERYSTRDAIEFHTKYYNP
                     ANTVCVLAGDVTLAEARRLAEVYFGRYPAGQRAPETVTAEPPQQGPRKSVRFLEGART
                     PVVRIGFHGARINTPDFFALDALTMVLSQGRSARMTQNIVEQGLAVEAWAGNPDQRYG
                     GMLVLGGSPNEPEAVKRPGAVEEEKRAAYLAACEALEGVLLAELEKLKTELVAPQELE
                     RLKKLNRRDFIDRLRSNESVAGTLATLEVQAGWRYLNDYLRNMDAVTPEEIRRVARQV
                     ARSENKTTAFVIPGGAARRPPEAYAEVRSISGSAAAGRELHKGPLQNHSIYPTPAGWK
                     HPLSFARHPHRVDYPEAVQMAIGGAKAFFLPDHELPLIDLTIYVKAGAVDLQDSEAGL
                     TDLLEGTIIRGGTESLSPVELAVLLDDNAIKMGVDIGLEETAIKLSVMASDWEKGLGI
                     LQEVLTRPRFDAKVLEVAKEQEMAGLLRQGEDAQAVAMRESMIWHFKGHPYGRDPLAA
                     TRVIPAVTRDDLRRFLSSHFVPANMVVAVSGDIQLGQVRESLGRFISGLPAEAAPERH
                     LAQPPP"
BASE COUNT          293 a          605 c          582 g          237 t
ORIGIN      
        1 ccgcctggct cgacctgaac gcaacggcct acaccgcgca cccctaccgc aaccccgtca
       61 tcggctggaa gtccgacatg gagcgctaca gcacgcggga tgcgatcgaa ttccacacga
      121 aatactacaa cccggccaac accgtctgcg tgctggcggg cgacgtgacc ctggctgaag
      181 cccggcggct ggccgaagtt tacttcggac gctacccggc cggacagcgc gcccccgaga
      241 cggtcacggc ggagccgccc cagcaggggc cgcgcaagag cgtgcgcttc ctcgagggcg
      301 cgcgcacccc cgtcgttcgc atcggctttc acggggcgcg catcaacacc cccgacttct
      361 tcgccctgga tgcgctcacc atggtcctga gccaggggcg cagcgcgcgg atgacccaga
      421 acatcgtcga gcagggcctg gcggtcgagg cctgggcggg gaaccccgac cagcgctacg
      481 ggggcatgct cgttctgggc ggctccccca acgagcccga ggcggtgaag cggccggggg
      541 cggtcgagga ggaaaaacgg gccgcctatc tggcggcctg cgaggccctg gagggggttc
      601 tgctggccga gctggaaaaa ctcaaaacgg agttggtcgc cccgcaggag ctcgagcgcc
      661 tgaagaagct caaccggcgc gacttcatcg atcggctgcg cagcaacgaa agcgtcgccg
      721 ggaccctggc gacgctcgag gtgcaggccg ggtggcgtta tctcaacgac tacctgcgca
      781 acatggacgc ggtcacaccc gaggagatcc gccgggtcgc ccggcaggtg gcccggtccg
      841 agaacaagac cacggctttc gtgatcccgg gcggcgcggc ccgccgcccg cccgaagcct
      901 atgccgaggt ccgctcgatc agtggcagcg cggcggcggg gcgcgagctt cacaaggggc
      961 cgcttcagaa tcactcgatc tacccgaccc cggccggctg gaagcacccc ctgtcctttg
     1021 cccgccaccc gcaccgcgtc gattaccccg aagccgtcca gatggcgatc ggcggggcca
     1081 aggcgttttt cctgccggac cacgaactgc cgctcatcga cctgacgatt tacgtcaagg
     1141 ccggcgccgt cgacctgcag gattccgagg cgggcctgac ggaccttctg gagggcacga
     1201 tcatccgggg cggcaccgag agcctctctc cggtcgagct ggccgtgctg ctggacgaca
     1261 acgccatcaa gatgggcgtg gacatcgggc tggaagagac cgccatcaag ctctccgtga
     1321 tggcttccga ctgggaaaaa gggctcggga tcctgcagga ggtgctcacg cggccgcgct
     1381 tcgacgccaa ggtgctcgag gtggccaagg agcaggagat ggccggcctg ctgcggcagg
     1441 gcgaggacgc ccaggccgtg gccatgcggg agagcatgat ctggcacttc aagggccacc
     1501 cctacggccg cgacccgctg gcggcgaccc gggtcatccc ggccgtcacc cgggacgacc
     1561 tgcggcgctt cctctcctcc catttcgttc ccgccaacat ggtggtggcg gtgtcggggg
     1621 acattcaact cggtcaggtc cgggagagcc tgggccgctt catcagcggc ctgcccgcgg
     1681 aagcagcgcc tgagcggcac ctcgcccaac cgccccc
//
LOCUS       DATIFF010000670         1562 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_85740, whole genome shotgun sequence.
ACCESSION   DATIFF010000670 DATIFF010000000
VERSION     DATIFF010000670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1562
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85740"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            110..1093
                     /locus_tag="VLD58_09925"
     CDS             110..1093
                     /locus_tag="VLD58_09925"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSB54665.1"
                     /translation="MPRRAFLAITAGGLLAAPLATEGQQAGKVYRIGFLGNSTEALEA
                     NLVGPFREGLRERGYVEGRDLTIEYRWAEGAYERFPALITELIALKVDIIVTAGTPAA
                     LAVKRMTTTIPVVMAAVGDPIGTGLVKSLARPGGNLTGSVAIAPDLEGKRLELLTQIV
                     PKLSSVAFLGNPANPLHVTSEKQASAAAKALHLKVVFFPVRAEGEFDHAFQAIVGQRS
                     GALVMLADRLFLHHRARIVEFTARHRLPAVYAYDELVQVGGLMSFGPSYPELHRRAAY
                     YVDRILKGAKPGDLPIEQPTKFELVINLKTAKALGLTIPPSLLQRADQVIE"
     gene            complement(1176..>1562)
                     /locus_tag="VLD58_09930"
     CDS             complement(1176..>1562)
                     /locus_tag="VLD58_09930"
                     /inference="COORDINATES: protein motif:HMM:NF014430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSB54666.1"
                     /translation="PTLWARLGDAPGRWESFRHLQAQAGAVPVTKRSGKQRVVHFRFA
                     CDKSLRHVVDQVAFLSLLSSAWARAYYDQQRARGHAHHQALRALGAKWLKIIFVMWHR
                     QVPYDEPYHLATMTRQQLRSHQTTIA"
BASE COUNT          249 a          533 c          527 g          253 t
ORIGIN      
        1 gtcgttcacc caccccctac cgtagtcgcc gaccgaaggg ccgaaccgca ggcggaaagg
       61 agaccccgca gcgatggcgc gccggatgga gcagatctgc ttgccccaga tgcctcgccg
      121 cgccttcctg gcaatcacgg ctggcggcct cctcgccgcg ccgctcgcca ccgaagggca
      181 gcaggcgggg aaggtgtacc ggatcgggtt cctcggtaac tccaccgagg ctctggaggc
      241 taacctcgtc gggccgttcc gcgaggggct ccgcgagcgc ggctacgtcg agggccggga
      301 tctcactatc gagtaccgct gggccgaagg agcgtacgag cgcttcccgg cgctcatcac
      361 ggaactcatt gccctcaagg tggatatcat cgtcacggct ggcacgcccg cggccctcgc
      421 ggtcaagcgc atgaccacga cgatccccgt cgtcatggct gcggtaggcg acccgatcgg
      481 cacgggcttg gtcaagagcc tcgcgcgacc cggcgggaac ttgaccgggt cggtggcgat
      541 cgcgccggac ctggagggaa agcgcctgga gctgctcacg cagatcgtac ccaagctctc
      601 gtccgtggcc ttcctgggga atccggccaa ccccctccac gtgacctcgg aaaagcaggc
      661 cagcgccgcc gccaaggcgc tgcacctgaa ggtggtgttc tttccggtgc gggccgaggg
      721 cgagttcgac cacgcgtttc aggcgatcgt cggccagcgg tccggggcgc tcgtcatgct
      781 ggcggatcgg ctcttcctgc atcaccgggc gcgaatcgtc gagttcaccg cccggcaccg
      841 gctcccggcg gtgtacgcct acgacgagct ggtgcaggtc ggcgggctga tgtccttcgg
      901 accgagctat cccgagctgc accggcgtgc cgcctactac gtggacagaa tcctcaaggg
      961 cgcgaagccc ggcgacctcc ccatcgagca gccgaccaag ttcgagctgg tgatcaacct
     1021 caagaccgcc aaggccctcg gcctgacgat cccgccgtcg ctcctgcagc gggcggatca
     1081 ggtgatcgaa tgatggatcg gcgagcgttc atcggcagct ttgccggcag cctcctcgtc
     1141 gcgccgctgg ccgtcgagac tttctctggt tcatgtcaag cgatagttgt ctgatgcgac
     1201 cgcagttgct ggcgcgtcat ggtggccaag tggtacggct cgtcatacgg gacctggcgg
     1261 tgccacatga cgaagatgat cttcaaccat ttcgccccga gcgcccggag cgcctggtga
     1321 tgcgcgtggc cccgcgcccg ctgctggtcg tagtaggccc gggcccaggc gctggagagc
     1381 agcgagagga aggccacctg gtcgaccacg tgtcgcaacg acttgtcgca ggcgaagcgg
     1441 aagtggacga cccgttgctt gccgctgcgt ttcgtcacgg gcacggcgcc ggcctgcgct
     1501 tgcagatgtc gaaacgactc ccaccgtccg ggggcgtccc ccaggcgggc ccagagggtc
     1561 gg
//
LOCUS       DATIFF010000671         3015 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1316225, whole genome shotgun sequence.
ACCESSION   DATIFF010000671 DATIFF010000000
VERSION     DATIFF010000671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3015
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1316225"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            460..1866
                     /locus_tag="VLD58_09935"
     CDS             460..1866
                     /locus_tag="VLD58_09935"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HSB54667.1"
                     /translation="MLILLPACTVGPDYHRPAVDLPDAYRGATAVGMPAPSVGDLAWW
                     ELFQDPALQELIRTALAANHDLQIAVTRILQAQAQVTIARSQLWPTVNALAEAPYARF
                     TGAQGNRPPLVPRGEHQGEVFAPIGGASVSWELDLWGRLRRATESARADLLATEEARR
                     GVVTTLVAQVAQAYFDLRSLDAILEISRQTLRSRRQALDLMQARYEHGLSPLMDVRQA
                     EALVQEAARTVPDVERRIEQTENAINLLLAKNPGPVPRGRPLVEQMTIPAAPAGVPSD
                     LLTRRPDIRQAEAQMISANAQIGAVKAQLFPTVMITGFAGGGGTVVGGQTFGPFGLFQ
                     AAPTITIPIFNAGRLVAQVDLAEARTREAVIRYQQAIDGAVSEVADSLVEVRKREEVR
                     QEQVKLVAALQDASSLAKNRYTGGVTNYLEVLDTETRLFGSQLALVQAQLDNAVAVIQ
                     LYRSLGGGWTAQETASAQ"
     gene            1946..>3015
                     /locus_tag="VLD58_09940"
     CDS             1946..>3015
                     /locus_tag="VLD58_09940"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSB54668.1"
                     /translation="MRYRNTGLGWLALGALLATGCGQRQAGPTAPPPLPVAVAAVTQQ
                     DVPVYAEWIASTDGAVNATIRAQVQGYLVSQRYREGDLVEKGQLLFEIDARPFQATLS
                     QAEAAEQQAVAALSQAEATLEQAKADVAKQEALWVTAKANYDRFKELVGRGAVSQKDV
                     DDATGAERATHAAVAAAKANVIAAQAAIGVQRAAIAAARAAAEKARVDLSFTKILSPV
                     TGIAGIAKAQIGDLVGPPPGSTEELTTVSSVDPIKVYVPMSEQEYLARARQGKESAGG
                     PIELTLADGSRHPQTGRIAFTDRQADVQTGTIKVAVLFPNPGNVLRPGQFARVRAQRS
                     VKTGALLVPQRAVMEQQGSYQVA"
BASE COUNT          503 a         1027 c         1053 g          432 t
ORIGIN      
        1 tcgtaggagg cctcgatgtg gtctgggcag gagtccgtga ataacgcccc aggcgtcaac
       61 atgatagatc acgcgtagtt ccacagccgc ctcgcgtccg ctgcctgcct ggcccgttcc
      121 gtgcaccgtt gcccgccgaa agaaggcgtc cacacaattt ggacccgagc gcagcggggt
      181 cgcgaccgag ggggcctctg gggtgcgcgg acgatgaaac aagcggctgt accggcacag
      241 ggcaagccgt cgggaatctg ggtcgcggac tgcgctcgcc gtacgtcggc tggattatcg
      301 ggtgagcgcg gctgtcgcaa cgacgccatg acggatcgga atggaaaggg gaacgaagtg
      361 aaactgcgcg tgagcgagcc tgagcctcag tccggcaccg ccgtctctgg gcgtgtttcg
      421 gccgcatccc tcaggggcgc atgcctcgcc ctgctgggga tgcttatcct tcttccggcc
      481 tgcaccgtcg gcccggacta tcaccggccg gccgtggacc tgcccgatgc gtaccggggg
      541 gccaccgcag taggtatgcc ggcgccctcg gtcggcgacc tcgcgtggtg ggagctgttc
      601 caggatcccg cgctccagga gctgatccgc acagcgctcg ccgccaacca tgacctgcaa
      661 atcgccgtca cgcggatcct ccaggcgcag gctcaggtca cgattgctcg gtcccagctc
      721 tggcccacgg tcaatgccct cgccgaggcg ccgtacgccc ggtttaccgg ggcgcagggg
      781 aaccggccgc cgttggtgcc gcggggcgag caccaaggcg aggtctttgc ccccatcggg
      841 ggcgccagcg tctcctggga gctggacctg tgggggcgcc tgcggcgcgc gacggaatcg
      901 gcccgggccg acctgctggc taccgaggaa gcccgacggg gtgtcgtgac cacgctggtc
      961 gcccaggtcg cccaggccta cttcgatctg cggtcgctgg atgcgatcct ggagatcagc
     1021 cggcagacgc tgcgctcgcg gcggcaggcc ctcgacctca tgcaggcgcg gtacgagcac
     1081 ggcctctcgc cgctcatgga cgtccgccag gcggaggcgc tggtacaaga ggcggcgcgg
     1141 accgtcccgg acgtggagcg gcgcatcgaa cagacggaga acgccatcaa tctcttgctc
     1201 gcgaaaaacc cgggaccggt tccgcgaggg cgcccgctcg tggaacagat gacaatcccg
     1261 gccgccccag ccggcgtgcc ctcggacctc ctgacgcgcc gccccgacat ccggcaggcg
     1321 gaagcccaga tgatctcggc caatgcgcag atcggggccg tgaaagcgca gctcttcccg
     1381 acggtcatga tcaccggctt cgccggcggc ggcggcacgg tggtgggcgg gcagacgttc
     1441 gggccgttcg gcctgtttca ggcggccccg accatcacca tccccatctt caatgcgggg
     1501 cggctggtgg cccaggtgga tctggccgaa gcccgcaccc gggaagccgt gatccgctat
     1561 cagcaggcga tcgatggcgc cgtcagcgag gtcgcggatt ccctggtcga ggtccgcaag
     1621 cgggaggagg tccggcaaga gcaggtgaag ctcgtcgccg cacttcagga cgccagctcc
     1681 ctcgcgaaaa atcgatacac gggcggggtg accaactacc tcgaggtgct cgatacggag
     1741 acccgcctct tcgggtcaca actcgccctc gtccaggctc agctcgataa cgccgtcgcc
     1801 gtgatccagc tctatcggtc cctcggcggc gggtggaccg cccaggagac ggcctccgcg
     1861 cagtagaggg cgtcagaaca tccgtaaccg cttcggctcc cccgggatct tcccggcatg
     1921 cgggccaagc tacaggagaa cgttgatgcg atatcggaac acggggctgg gctggctggc
     1981 actcggtgcg ctgctcgcga ccggctgcgg gcaaaggcag gcggggccga ccgccccgcc
     2041 gccgctgccg gtggcggtgg ccgcggtaac acagcaggat gtgccggtct atgcagaatg
     2101 gattgcctcc acggacggag ccgtcaacgc gaccatccgc gcccaggtgc aggggtatct
     2161 cgtttcccag cggtaccggg aaggcgacct tgtggagaaa ggacaattgt tgttcgagat
     2221 cgacgcgcgg ccgttccagg cgacgctcag ccaggccgag gcggccgagc agcaggcggt
     2281 agccgcgttg tcgcaggcgg aggccaccct ggagcaggcc aaggcagacg tcgcgaagca
     2341 agaagccctc tgggtcactg ccaaggcgaa ttacgatcgc ttcaaggagc ttgtcgggcg
     2401 gggggccgtc tcccagaaag acgtggacga cgccaccggg gccgagcgcg cgacgcacgc
     2461 cgcggtcgcc gccgcgaaag ccaacgtcat cgccgcccag gcggccatcg gggtgcagcg
     2521 cgccgcgatc gccgcagcgc gggccgccgc cgagaaggcg cgcgtggatc tcagcttcac
     2581 caagatcctc tcgccggtga ccggcatcgc cggcatcgcg aaagcccaga tcggcgattt
     2641 ggtgggtcct ccgccgggct cgacggaaga actcacaaca gtatcttcgg tcgacccgat
     2701 caaggtctac gtgccgatga gcgagcagga gtacctggcg cgcgcccggc aggggaagga
     2761 gagcgccggc ggaccgatcg agctgaccct ggccgacggg agccggcatc cccagacggg
     2821 ccgcatcgcc ttcaccgatc gccaggcgga tgtccagacc ggcacgatca aggtcgccgt
     2881 cctcttcccc aacccgggga acgtcctccg gccggggcag ttcgcccgcg tccgcgccca
     2941 gcggagcgtc aagacgggcg ccttgctcgt cccccagcgg gccgtcatgg aacagcaggg
     3001 cagctatcag gtggc
//
LOCUS       DATIFF010000672         2868 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2238775, whole genome shotgun sequence.
ACCESSION   DATIFF010000672 DATIFF010000000
VERSION     DATIFF010000672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2868
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2238775"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..791
                     /locus_tag="VLD58_09945"
     CDS             <1..791
                     /locus_tag="VLD58_09945"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HSB54669.1"
                     /translation="LPAQPNAPPPNARALQLLAGWLLADTVVYAAILSVSTLVDQQRR
                     LRARDLTAAQLETQLTRAELQALQMQLQPHFVFNALHTVGAMVRTNNQAGAIQVLTGL
                     GDLLRRVLDRAAAQEVPLRQELDFARTYLEIEQIRFRDRLTVEVVAQPDILEAAVPHL
                     VLQPLVENAIRHGVAPTPGHCTVRVVAERAGDRLHLTVSDDGSSSPDHGARDDGIGLA
                     NTRARLARLYGADGHLVFDVSAPRGHAVRVALPYHAVPAAGDSA"
     gene            788..1567
                     /locus_tag="VLD58_09950"
     CDS             788..1567
                     /locus_tag="VLD58_09950"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HSB54670.1"
                     /translation="MTAPIRTLIVDDEAGARDVLRLLLGQDPDIHLIGECGDGLEALD
                     QLRHGRPELVFLDVQMPAMDGLTVLGQLEEADLPVVVFVTAYDQHALKAFELHAVDYL
                     LKPFDDARFFRALARAKERVRLGQLGALAAPLLACLRGLEPAPPGRWLERLVVRDDGR
                     SLILPLSEVDWIEARGDYLRVHAGKATHLLRTTMKELERQLNPASFIRIHRSAIVRLS
                     RIRELQPYLRGDFVVLLADGTRLRLARGLRGQVEAALTQAP"
     gene            1603..2061
                     /locus_tag="VLD58_09955"
     CDS             1603..2061
                     /locus_tag="VLD58_09955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54671.1"
                     /translation="MRTRILPLALLFACAGPAGDAPGGSAVLPGAFHYLARGKSGAPL
                     LEGEIDIRVADDSTVGGSWNIRWAPGADTTALVGPQVGSGVLRGSFTDSTLVLQLNPN
                     MADNNVSLLAARGPKGYTGRWQWSTIAGPTAGGAFEAIWSDSLPTPRPVD"
     gene            2061..2453
                     /locus_tag="VLD58_09960"
     CDS             2061..2453
                     /locus_tag="VLD58_09960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54672.1"
                     /translation="MNKRGILAIVAGVVAVIVVTTLVDILLHAVGVYPAWGVPLTDQL
                     ALLATSYRFPISVAGAYLTARLAPDRPLYHAMILGLLGTVLGLVGVVATWNQNLGPRW
                     YPIALAALSIPQCWIGGKLFEMRGARSV"
     gene            complement(2512..>2868)
                     /locus_tag="VLD58_09965"
     CDS             complement(2512..>2868)
                     /locus_tag="VLD58_09965"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSB54673.1"
                     /translation="GAALLLATLGVYAVVAFSVSRRSQEMGLRLALGAEPGAIRRQVA
                     REGMIYPALGLVAGFGASIAVSRMLQSSLYEVAPGEIRFSLLALGLLALAAAAGCLVP
                     ASRATRIDPAVTLRAD"
BASE COUNT          423 a         1016 c          959 g          470 t
ORIGIN      
        1 tgttgcccgc gcagcccaac gctccgcctc cgaatgcccg ggcactccag ctgctcgccg
       61 gctggctgct ggccgatacg gtggtatacg ccgcgatcct gagcgtgagc accctggtcg
      121 accagcagcg ccggctccga gcgcgggatc tcaccgcggc ccagctcgaa acccagctca
      181 cccgggccga gctccaggcg cttcagatgc agttgcagcc gcacttcgtc ttcaacgccc
      241 tccacacggt gggcgccatg gtgcgcacca acaaccaggc gggcgccatc caggttctca
      301 ccgggctggg cgacctgctc cgccgagtgc tggaccgggc ggcggcacag gaggttccgc
      361 tccggcagga actcgacttc gcgcgcacct acctcgaaat cgagcagatc cgcttccgtg
      421 acaggctcac tgtggaggtc gtggcccaac cggacattct cgaggctgcg gtgccgcacc
      481 tggttctcca gccgctggtc gagaacgcca tccggcatgg cgtggcgccg acgccgggcc
      541 actgtaccgt gcgggtggta gcggagcggg ccggtgaccg tctccatctc accgtctcgg
      601 acgatgggag cagcagcccg gaccacggtg ctcgcgatga cgggattgga ctggcgaaca
      661 cccgggcacg gttggcgcgg ctgtacggcg cggatggaca tctggtcttc gacgtcagcg
      721 ccccgcgagg gcatgcggtg cgggtggcgt tgccctacca cgcagtgccg gcagctggag
      781 acagcgcgtg acggccccga ttcgaaccct gatcgtggac gacgaggcgg gcgcccgcga
      841 tgtcctgcgc ctcctgctcg ggcaggatcc cgatatccac ctgattggag agtgcggcga
      901 cgggctcgag gcgctcgatc agctgcggca cgggcgcccg gaactggtct tcctcgatgt
      961 gcagatgccg gcgatggacg ggctcaccgt actcgggcag ctggaggaag ccgacctgcc
     1021 ggtcgtggtg ttcgtgaccg cctacgatca gcacgccctc aaggccttcg agctgcatgc
     1081 ggtcgactac ctcctcaagc ccttcgacga cgcccgcttc ttccgggccc tggcccgcgc
     1141 caaggaaagg gtccgcctgg gccagctcgg cgccctcgca gcgccgctcc ttgcgtgcct
     1201 gcgcgggctc gaaccggcgc ccccgggccg ctggctggag cggttggtgg tgcgggacga
     1261 tggccgctca ctcatcctcc cgctgtcgga ggtcgactgg atcgaggcgc ggggcgacta
     1321 tctgcgggtg catgccggca aggccaccca cctgctccgt accaccatga aagagctgga
     1381 acgccagctc aaccccgcca gcttcatccg gatccaccgt tccgcgattg tgcgactgtc
     1441 gcggatccgg gaactccagc cgtatctgcg gggcgatttc gtggtactgc tcgccgacgg
     1501 cacccggctc cgtctggccc gcggtctccg aggccaggta gaggcggcgc tgacgcaggc
     1561 tccgtgaggt actgttcgtt ccgtcattcg ccaggatact ccatgcgtac tcgaatccta
     1621 ccgcttgcac tgctcttcgc ctgcgccggc ccggccggtg acgcgccggg tggctcggcc
     1681 gtcctcccgg gcgcattcca ctacctggcc cgcggcaaga gcggcgcgcc gctcctcgag
     1741 ggagaaatcg atatccgggt agccgacgat tccacggtgg gcggcagctg gaacatccgg
     1801 tgggcgcccg gtgcggacac caccgccctg gtgggacccc aggtcggctc gggcgtgctg
     1861 agaggctcgt tcaccgattc gaccctggtg ctccagctca acccgaacat ggcggacaac
     1921 aacgtctccc tccttgccgc gcgcggtccg aaggggtaca ccggccgctg gcagtggtcg
     1981 accatcgccg gaccgaccgc gggcggcgcc ttcgaagcga tctggagcga ctctcttccc
     2041 actccgaggc cggtggactg atgaacaagc gcggaatact cgcgatcgtc gcaggcgtgg
     2101 tcgccgtcat cgtggtcacc acgctggtcg atatcctgct ccacgccgtg ggcgtgtatc
     2161 ccgcgtgggg tgtgccgctc accgaccagc tggcgctgct cgctacctcc taccgattcc
     2221 caatcagcgt cgcgggggcg tatctcacgg cccggctggc acctgatcgg ccgctctacc
     2281 acgccatgat cctgggcctg ctgggaacgg tgctgggact ggttggtgtg gtggcgacct
     2341 ggaatcagaa tctggggccg cgctggtacc ccatcgccct cgcggcgctc tcaattcccc
     2401 agtgctggat cggcgggaag ctcttcgaaa tgcggggtgc tcggtcggtg tgaccttgtg
     2461 ttaaagtggt tcacgtgagc gtacccgccg ggcccggggc agtttcctgc gctaatccgc
     2521 ccgcagtgtg acggccgggt cgatccgggt ggcgcggctc gccggcacga gacaccccgc
     2581 ggccgcggcg agcgcgagca gcccgagcgc cagcagtgaa aaccggattt cgcccggggc
     2641 cacctcgtag agtgaactct ggagcatccg gctcaccgca atcgacgccc cgaatcccgc
     2701 caccagtccg agcgccgggt agatcatccc ctcccgcgcc acctgtcttc gtatcgcacc
     2761 tggctcggcg ccgagcgcca ggcggagtcc catctcctgg gagcgccggc ttaccgagaa
     2821 cgcgaccaca gcgtacacgc ccagtgtggc gagcagcagg gcggcccc
//
LOCUS       DATIFF010000673         3145 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_240709, whole genome shotgun sequence.
ACCESSION   DATIFF010000673 DATIFF010000000
VERSION     DATIFF010000673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3145
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240709"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..213
                     /locus_tag="VLD58_09970"
     CDS             <1..213
                     /locus_tag="VLD58_09970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HSB54674.1"
                     /translation="EAGVPILPLVVKGTRTALPKHGWRFGRSDAEVRVLPPVETAGLA
                     PRDVPALTERVRNLILAERVKLHQST"
     gene            complement(216..1139)
                     /locus_tag="VLD58_09975"
     CDS             complement(216..1139)
                     /locus_tag="VLD58_09975"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB54675.1"
                     /translation="MDLALLTAFLASAVRVATPLLFAALGETISERGGVINLGIEGAM
                     LAGALAAALGAQEGGVWAGTLAALLAGMLVAGLFALIAVRAGADQIITGTALTLGAVG
                     LTGAISRRAFGSAGVGLTLPTFPALALPGLSRIPVLGPAIFTQSVLTYLGFLAVPLFW
                     WVLFRTRWGLELRATGESARNSRAAGVRVGRMRTVGVLIAGGMAGLGGASLVLAQVGT
                     FAEKMTAGRGFIAIAIVVLGAWNPARVLAAALFFGAAMALQFLFQSLGSGVPYQLFLM
                     LPYLLTLATLAGAWGRTAAPADLGKSEEGEG"
     gene            complement(1141..2190)
                     /locus_tag="VLD58_09980"
     CDS             complement(1141..2190)
                     /locus_tag="VLD58_09980"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB54676.1"
                     /translation="MSDMERSRLSGVLAPVIAVLAGLLVLALALLGGGFDPGLALGAL
                     WRGAFGSWDAVLSATLPRAIPLITIGLGIGLAFRAGALNIGAEGQFYAGAVVATWVGL
                     LLGPWPRPVALPLVLAASLAAGLLWAALPIFLRLRFGVLEVISTLLLNFVAEALVSWM
                     VQGPLQESRHIYPQSDPLPLAARLPGLPGTRLHLGFALALLVALLLWVFFRYSLAGFQ
                     FRATGANPLAARVMGGVNTRRVFALALGASGALAGLAGGFEVSGTSYALFQSLSPGYG
                     FTAIAVALLARLDPLATIASGLLFAALEAGSSAMQREAQVPAVVVWVAEAVIIIAILL
                     SDTWRRRRVRAAVAG"
     gene            complement(2187..>3145)
                     /locus_tag="VLD58_09985"
     CDS             complement(2187..>3145)
                     /locus_tag="VLD58_09985"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSB54677.1"
                     /translation="SPPDGEELLRQLVRLKSNGVSTVLITHKLREALTVADRVTVLRQ
                     GRVVFSGPVKGQTAESLAAHMLGEAVHASPTMRAGGASGPTIVRVQSLSMLRLEPSGS
                     GLRDASLTLRAGELVGVAAVEGNGQRELFRAIAGLAPPASGTVEVEHPVSFVPEDRTA
                     EALLEDFTLTENLVLSQGAAAPWIQGPWVQWRRAAARTGELISAFGVRAPGPGAAAGS
                     LSGGNQQRMLIAQALERKPRVLLAENPTRGLDLKAADEVTRRLADAASSGVGVLVHLP
                     DLDDLLGLVTRLVVMFDGRVIEVEPGSSRERIGQLMLGAERS"
BASE COUNT          546 a         1178 c         1022 g          399 t
ORIGIN      
        1 gaggccggcg tccccattct tcctctggtg gtgaagggca cccggaccgc attgcccaaa
       61 cacggctggc gcttcggccg gtcagacgca gaggtccggg tacttcctcc ggtcgagacg
      121 gccggcctcg cacccaggga cgtcccggcc cttaccgagc gggtgcgcaa cctgattctc
      181 gccgagcgcg tgaagctcca ccagagcacc tagcctcagc cttcgccctc ctcgcttttc
      241 cccaggtctg ccggggccgc cgttcgtccc caggctccag ccagtgtcgc cagcgtcagc
      301 aggtacggaa gcatcaggaa gagctggtag ggcacccccg agcccagcga ctggaacagg
      361 aactggagcg ccatggccgc gccgaagaag agcgccgcgg ccagcactcg cgccggattc
      421 cacgcaccca gtacgacaat cgcgatcgcg atgaagccgc gccccgccgt catcttctcg
      481 gcgaaggtgc cgacttgcgc cagcaccagg ctcgctcccc caagccccgc cattcccccg
      541 gcgatcagca ctcccacagt gcgcatgcgg ccgacgcgaa ccccggcggc ccgactgttc
      601 cgcgccgatt cgccagtggc ccggagctcg aggccccagc gggtgcggaa gagcacccac
      661 cagaacagcg gcaccgcgag aaaaccgaga taggtcagga cactctgggt gaagatggcg
      721 gggccgagga ccgggatccg cgagagacca ggtagagcca gcgcggggaa ggtcggcagc
      781 gtcagtccca ctccggccga tccaaaggcc cggcggctga tcgcgccggt cagacccacg
      841 gcgccaagcg tcaacgcggt accggtgatg atctggtcgg ccccggccct gactgcgatc
      901 agcgcaaaga gtccggcgac cagcattccg gccaggagcg ctgccagcgt gccggcccat
      961 accccgcctt cttgtgcccc gagcgcagcc gcgagcgccc cggccagcat ggcgccctcg
     1021 atcccgaggt taatcacgcc gccccgttcc gagatggtct cgcccaacgc cgcgaagagc
     1081 agcggcgtcg ctactcggac cgccgaggcc aggaacgcgg taagcagggc gagatccatt
     1141 tcagcccgcc accgcggcgc gcactcggcg gcggcgccag gtatcgctga ggaggatcgc
     1201 gatgatgatc accgcctccg ccacccagac gacgacggcg ggaacctgcg cctcacgctg
     1261 catcgcactg gaccccgctt ccagggcggc gaacaacagt cccgacgcga tggttgcgag
     1321 cggatccagc cgggccagaa gcgcgaccgc gatagcggtg aagccgtacc cgggggagag
     1381 gctctgaaac agcgcgtagc tcgtcccgct cacctcgaat ccgcccgcga ggcccgccag
     1441 cgcacccgag gccccgagcg ccagcgcgaa cacccgccgg gtatttactc cgcccatcac
     1501 tctggcagcc agcggattcg cgccggtggc ccggaactgg aacccggcca ggctgtaccg
     1561 gaagaacacc cagaggagga gcgccacgag caatgccagc gcgaagccga gatggagtcg
     1621 ggtgccgggg agtcccggaa gacgcgccgc caggggcagg ggatcgctct gcggatagat
     1681 gtgccgcgac tcctgtagcg gcccctgcac catccagctc accagcgctt ccgccacgaa
     1741 attgagcagc aacgtgctga tcacctcgag gaccccgaac cggagccgca ggaagatcgg
     1801 gagcgcggcc cacaggaggc ccgccgcgag cgaggcggcc agcaccagtg gcagcgcgac
     1861 cggtcggggc cacgggccga gcagcaatcc gacccaggtg gccaccaccg ccccggcgta
     1921 gaactggccc tccgcgccga tgttgagcgc gccggcccgg aaggcgaggc cgattccgag
     1981 accgatcgtg atgaggggaa tggcgcgcgg gagggtggcc gatagcaccg cgtcccagga
     2041 accgaatgcc ccacgccaga gcgcacccag tgcgagcccg ggatcgaacc ctcccccgag
     2101 cagggcgagc gcgagcacca gcagcccggc cagcacggcg atgaccggag cgagaacgcc
     2161 cgagagtcgc gagcgctcca tgtcgctcat gaccgctccg ccccgagcat cagctggccg
     2221 atacgctccc tgctgcttcc cggctccact tcgatgaccc gcccgtcgaa catcaccact
     2281 agcctggtaa cgagcccgag caggtcgtcg agatcgggga gatgcaccag caccccgacc
     2341 ccggaggatg ccgcgtccgc caggcggcgc gtgacttcgt ccgcggcctt gagatcgagc
     2401 ccccgggtgg ggttctccgc caggagcact cgcggctttc gctccagcgc ttgggcgatg
     2461 agcatccgct gctggttgcc gccgctcagg ctacccgccg ccgctcccgg ccccggcgcc
     2521 cgcaccccaa aggcgctgat cagctctccg gtccgggccg ccgcgcgccg ccactgcacc
     2581 cacggcccct ggatccatgg ggccgccgca ccctggctca acaccagatt ttcggtcagg
     2641 gtgaaatcct cgagtagcgc ttcggcggtt cggtcctccg gcacgaaact gaccgggtgc
     2701 tcgacctcta ccgtgccgct cgcaggaggt gccagtccgg cgatggcccg gaacagctca
     2761 cgctggccgt tcccctcgac cgcggccaca cccaccagct ctccggctct gagagtcagg
     2821 gacgcatcgc ggagcccgct cccactcggt tcgaggcgca gcatcgacag cgactgaact
     2881 cgcacgattg tcggtccgct cgctccgccg gcgcgcatcg ttgggctcgc gtgcactgcc
     2941 tcgcccagca tgtgggcggc gagactctcg gccgtctggc ccttcaccgg accggagaac
     3001 acgacgcgcc cctgccgcag caccgtcacc cggtcggcta cggtcagcgc ctcccggagc
     3061 ttgtgggtga tcaggaccgt tgagactcca ttgctcttga ggcgcaccag ctgccgcagg
     3121 agttcttctc catccggggg cgaga
//
LOCUS       DATIFF010000674         2584 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1623374, whole genome shotgun sequence.
ACCESSION   DATIFF010000674 DATIFF010000000
VERSION     DATIFF010000674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2584
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1623374"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..306
                     /locus_tag="VLD58_09990"
     CDS             <1..306
                     /locus_tag="VLD58_09990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54678.1"
                     /translation="TGDRTYLATAEYRYIFGEDVFKAVDIGVAGFIDHGGAWYAGSPR
                     RTGTNLGLGLRLGPSRAASSNPTRLDLAYRFKNDRQKAGWVFVVASGLVFNTQPRGQ"
     gene            329..739
                     /locus_tag="VLD58_09995"
     CDS             329..739
                     /locus_tag="VLD58_09995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54679.1"
                     /translation="MTTPDAAPAPPPSRRLPKLRTVLILALVIPVVLLSIYTWLALHW
                     DYSNGYRSGLLQKFSQKGWLCKTDEGELWQSVVTNVAPNVWYFTVRDPNIKQALDTLV
                     GKNVRLHYTEHRGVPTSCFGDTNYYVDGVTVITP"
     gene            900..1280
                     /locus_tag="VLD58_10000"
     CDS             900..1280
                     /locus_tag="VLD58_10000"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HSB54680.1"
                     /translation="MHSVLTPTAPTPAGHYSQAIVHNGLVYVAGQLPINPASKSRDVG
                     TIEEQTRQVLANVGAILDAAGSGLDRVLQMTVYVSDIELWGRFNTVYTEIMGNHRPAR
                     AVVPVNGLHYGYQVEVQAIAAVRE"
     gene            1277..2449
                     /locus_tag="VLD58_10005"
     CDS             1277..2449
                     /locus_tag="VLD58_10005"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF013345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HSB54681.1"
                     /translation="MSAGSAGPIVERILAGAEPAPGGASLESIETPAAVVDLSRLDAS
                     LRRTAAYCRQHGLGYRPHTKTHKSPVIGAAQLVAGATGLTVATLCEAEVMAEVCDDLL
                     LAYPQVGAAKLARLMRLAGRVRRLSVALDSPDALAALAAAAEASGQSVGVMIEWDAGM
                     GRVGVQTPADAVALGRAAAGARRLRYGGLMFYPGHIREGGEDGKRALGVVRTRLAEVL
                     DALDRAGLTPATVSGGSTPTLWLSHALPMLTEVRPGTTVFNDRTTAVVGASAWDDCAY
                     SVLATVVSTAVPGQAVIDAGSKALSKEELRGAGGGYGALLDRPDVVVTALSEEHGILD
                     LRQTEWRPRVGDRVRVVPNHVCVSVNLQEQVWGLTESDIRCRWPVAARGRTFQSCN"
BASE COUNT          405 a          881 c          870 g          428 t
ORIGIN      
        1 accggcgacc ggacctacct cgccaccgcg gagtaccgct acatcttcgg tgaggatgtc
       61 ttcaaggcgg tcgacatcgg cgtggccggg ttcatcgatc atggcggcgc gtggtacgcg
      121 ggcagccccc gtcgcaccgg taccaacctg gggcttgggc tccggcttgg cccgtcgcgg
      181 gccgcgtcgt cgaatcccac ccggctggac ctcgcctacc ggttcaagaa cgaccggcag
      241 aaggccggct gggtattcgt ggttgcctcg gggctggtgt tcaacaccca gccgcgcggc
      301 cagtgatcca gttccggaga atcctgtcat gaccacgccc gacgccgctc ctgcgcctcc
      361 gccctcccgc cggctgccga agctccgcac cgtcctcatc ctggcgctgg tgattccggt
      421 ggtgctcctc tccatctaca cctggctcgc gctccactgg gactactcca acggctaccg
      481 gagcggcctg ctgcagaagt tttcgcagaa gggatggctc tgcaagactg acgaaggcga
      541 gctgtggcag tcggtggtca ccaacgtcgc gcccaacgtg tggtacttca ccgtgcgcga
      601 cccgaacatc aagcaggcgc tcgacactct ggtggggaag aacgtgcggc tgcattacac
      661 cgagcaccgg ggagtgccca ccagctgctt cggcgacacc aactactacg tcgacggggt
      721 cacggtcatt acgccgtagg ctggccgtcg gcgctcttcc ggcaagctga atccgtttct
      781 ctttctcgat ggcgcttgaa tcgcccccgt ccacagcggt tgtgatccgt ttcaatcggt
      841 gtaaatctgt ggaagtcagt tagccgactc ttcaccgacg cacgacctcc ggcctcgcca
      901 tgcactccgt cctcactccc accgctccca cccccgccgg gcactattcc caggccatcg
      961 tgcacaacgg cctggtgtac gtcgcggggc agttgccgat caatcccgcc tcgaagagcc
     1021 gtgacgtcgg gaccatcgag gagcagaccc gccaggtcct cgccaatgtc ggcgccatcc
     1081 tcgacgccgc cgggagcgga ctcgaccggg tgctccagat gacggtgtac gtctccgaca
     1141 tcgagctctg gggacggttc aacacggtct acaccgagat catgggaaat caccggccgg
     1201 cgcgggcggt ggtgccggtc aacggcctgc actacggcta tcaggtcgag gtgcaggcga
     1261 tcgccgccgt ccgcgaatga gcgctggaag cgccgggccg atcgtcgagc ggattctcgc
     1321 cggggcggag ccggcgcccg gaggcgcttc actggagagc atcgagacac ccgccgcggt
     1381 ggtcgatctt tcccgcctcg acgccagtct tcggcgcacc gccgcctact gccggcaaca
     1441 cggtctcggc taccgtcccc ataccaagac ccacaagtca ccggtgatcg gcgcggccca
     1501 gctggtggcc ggcgccaccg ggctcacggt cgccacactc tgcgaggccg aggtcatggc
     1561 cgaagtgtgt gacgatctgc tgctggcgta cccccaggtc ggcgcggcga agctcgcccg
     1621 gctcatgcgg ctggcggggc gagtgcgacg actcagtgtg gcgctcgatt cgccggacgc
     1681 gctcgcggcc ctggcggccg cagcagaagc gtcggggcag tcggtgggag tcatgatcga
     1741 gtgggatgcc gggatggggc gagtcggcgt ccagacaccg gccgatgccg tggcactggg
     1801 gcgggcagcg gcgggcgcac ggcggctccg ctacggcgga ctgatgttct atccggggca
     1861 cattcgcgag ggcggcgagg acgggaagcg cgcccttggc gtggtgcgga cccgcctcgc
     1921 ggaagtgctg gacgcgctgg atcgcgccgg gctcacaccc gcgacggtga gtggtggctc
     1981 caccccgacg ctctggctca gccacgcgct gccgatgctc accgaggtcc gccccggaac
     2041 gaccgtcttc aacgaccgca ccaccgcggt ggtcggcgcg tcggcctggg atgactgcgc
     2101 ctacagcgta ctggcgacgg tggtaagcac cgccgtgccg ggacaggcgg tgatcgatgc
     2161 cggctccaag gcgctctcca aggaggaatt gcgcggagcc ggcgggggct acggcgcgct
     2221 gctcgaccgg cccgatgtgg tggtgactgc gctctccgag gagcacggca ttctggatct
     2281 ccgccagacg gagtggcggc cgcgggtggg agaccgggtg cgggtggtgc ccaaccacgt
     2341 gtgcgtctcg gtgaatctgc aggagcaggt atggggcctg acagagtcgg atatccggtg
     2401 ccgctggccg gtcgctgcgc ggggccggac ctttcaatcc tgtaactgag ccttcatcct
     2461 cccttcaggc catcctacga aaaccccata caggtcctca tgagcgcttc acatcccggg
     2521 ggccgcaatc gccattatcg gagggaccgt ggggcagtat tccattcagc cgaccggcat
     2581 cgag
//
LOCUS       DATIFF010000675         1133 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_854183, whole genome shotgun sequence.
ACCESSION   DATIFF010000675 DATIFF010000000
VERSION     DATIFF010000675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_854183"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(112..513)
                     /locus_tag="VLD58_10010"
     CDS             complement(112..513)
                     /locus_tag="VLD58_10010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54682.1"
                     /translation="MRTPDRVHGTREAAARQHINDPHPPEVRRRRGRPKGSTGISRRH
                     PDSLLAAEIAKSPLATVYASPDGELYHAVCKTALEFQGRRAQLEFDFYCLRCMEHVAL
                     PQFALSRIRFDMPRPADVVLPDWATSIVAYQ"
     gene            703..990
                     /locus_tag="VLD58_10015"
     CDS             703..990
                     /locus_tag="VLD58_10015"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative quinol monooxygenase"
                     /protein_id="HSB54683.1"
                     /translation="MLGIVATIKVKPGMEQQFEAVAKELVAKVNANEPGCRLYALHRA
                     EAPLTYVFMERYADQAAVEAHRGTDYFKALGRKMGEFMDGRPEVLRLKEVD"
BASE COUNT          176 a          345 c          428 g          184 t
ORIGIN      
        1 ggggcctgtc acggtatttc gtccggatcg cctcgaccgg agaggtcgtg tccgggatcg
       61 aacgggcggc gggcgacagc cggccgcgct gagcggccgt gcgcgccgta cttactggta
      121 cgcgacgatg ctggtggccc agtccgggag cacgacgtcg gccggccgcg gcatgtcgaa
      181 gcggatgcgg ctcagcgcga actgcggcag cgcgacgtgc tccatgcagc gcaggcagta
      241 gaagtcgaac tccagctggg cacgacggcc ctgaaactcg agcgcggtct tgcagaccgc
      301 gtggtagagc tcgccgtccg ggctcgcgta caccgtggcg agcggggact tcgcgatctc
      361 cgcggccagg agggagtcgg gatggcgccg gctgatgccg gtgctaccct tgggccggcc
      421 gcggcggcgt cggacctcgg gcgggtgcgg atcgttgatg tgctgcctgg cggcggcttc
      481 ccgggtcccg tgcacacgat ctggagttct catgcccggc cctaggagca agaggcgttc
      541 caggcgtgac actacagata agtagttgat tgtattgaat atagtacgct gtgggaccca
      601 cgagttgggg cgcgagcgct acaaaatttg gttgtgctgt ggccggaggt tgtcatccca
      661 cgaacggcgg gtgcccgaca ggcgtcccgc gggaggctct cgatgctggg catcgtcgcg
      721 acgatcaagg tgaagccggg tatggagcag cagttcgagg ctgtggccaa ggagctggtg
      781 gccaaggtca acgccaacga gccgggctgt cggctgtacg ccctgcaccg ggcggaggcg
      841 cccctgacct acgtgttcat ggagcgctac gcggaccagg cggcggtgga ggcccaccgt
      901 ggcaccgact acttcaaggc gctggggcgg aagatgggcg agttcatgga cggacgcccg
      961 gaagtcctgc ggctcaagga ggtcgactag cccccggcga gcttgacggt gtagccggcg
     1021 gcccggaggt gctcggccaa tcgctcgcgg tggtcgccct ggatctcgac cgcgtcgtcc
     1081 ttcagggtgc cgcccgctcc gcagagccgc ttcatcaggg cgacacgggc ctc
//
LOCUS       DATIFF010000676         2295 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_701528, whole genome shotgun sequence.
ACCESSION   DATIFF010000676 DATIFF010000000
VERSION     DATIFF010000676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2295
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_701528"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(15..1922)
                     /locus_tag="VLD58_10020"
     CDS             complement(15..1922)
                     /locus_tag="VLD58_10020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter Kup"
                     /protein_id="HSB54684.1"
                     /translation="MSEGTKAPPRGRALAGLALAALGVVYGDIGTSPLYALRECFTGE
                     HGLPPTVDNVLGILSLIVWSLNFVVSFKYISLVMRADNRGEGGILALMALVRSKRATG
                     NLRVRRFLLLLGLFGAALLYGDGVITPAISVLGAMEGLKVVAPAFDPFVVPITVAILL
                     ALFLFQKRGTAGVGLVFGPITLIWFICITLLGIRGILLDPSVIRALNPWYAVNFFAED
                     GLRGFLILGAVVLVFTGGEALYADMGHFGKRPIRVAWFGLVLPALLLNYFGQGALLLH
                     DPSAAHNPFYALVPTPLLIPMIVVATAAAIVASQALISGAFSLTQQAVQLGYSPRVTI
                     KHTSHTEAGQIYIPEVNQALAVACIGLVLAYRSSSNLAAAYGIAVTGTMTITTVLYYE
                     VMRARWNWPLWKAGGLAGLFLLVDATFFSANLVKVPSGGWFPIVVAIGIFTLMATWKQ
                     GRILLSGIMRENALPMDLFLRDIARRKPPRVPGVAVFLTSDASGAPPVLLHHLKHNQV
                     LHERVILLSVVTKEIPVVPEEDRLRSASLGEGFCQVIAHYGFMESPDVPAIIGALSQP
                     PPRGLGLTVNLMQTTFYLGRETLIATGRTKMATWRKKLFIVMTRNAQSAATFFRLPPN
                     RVVELGAQIQL"
     gene            complement(1924..>2295)
                     /locus_tag="VLD58_10025"
     CDS             complement(1924..>2295)
                     /locus_tag="VLD58_10025"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HSB54685.1"
                     /translation="YRDFPLQQHPFSRLAAHSAACADEQGKYWEQHRRIYEGQQDWAE
                     SSDAAPAFRRYAQLSGLDPARYDACMKSAKYAGRIQASYDEGVRAGVNSTPTLLIGGR
                     LYQGRLDSDAIARLVDSLTSR"
BASE COUNT          406 a          782 c          796 g          311 t
ORIGIN      
        1 taggaggcga acggctacag ctgtatctgg gcccccagct ccaccacccg gttcggcggc
       61 aggcggaaga acgtggccgc ggactgggcg ttccgcgtca tcacgatgaa gagcttcttg
      121 cgccaagtcg ccatcttggt ccggccggtc gcgatcagcg tctcccgccc cagatagaag
      181 gtcgtctgca tcaggttgac cgtgaggccg agcccgcgcg ggggcggctg gctcagcgcc
      241 ccgatgatgg cgggaacgtc gggcgactcc atgaagccgt agtgcgcgat cacctggcag
      301 aaaccctcgc ccaggctggc ggaccggagc cggtcctcct ccggaacgac cgggatctcc
      361 ttggtgacca ccgagagcag gatcacccgc tcgtggagca cctggttgtg cttcagatgg
      421 tggaggagca ccggcggcgc cccgctcgcg tccgacgtga ggaacacggc cacgccgggc
      481 acgcggggcg gcttgcgccg ggcgatgtcg cgaaggaaga ggtccatcgg cagcgcgttc
      541 tcgcgcatga tgcccgacag caggatccgt ccctgcttcc acgtcgccat gagcgtgaag
      601 atcccgatgg ccacgacgat ggggaaccac cccccgctcg gcaccttcac caggttggcg
      661 gaaaagaacg tcgcgtccac gagcaggaac agcccggcca gtcccccggc cttccagagc
      721 ggccagttcc accgcgcccg catcacttcg tagtacagca ccgtggtgat cgtcatcgtc
      781 cccgtgaccg cgatgccgta ggccgccgcc aggttgctcg acgagcggta cgccagcacc
      841 agcccgatgc aggcgaccgc gagcgcctgg ttcacctccg ggatgtagat ctgccccgcc
      901 tcggtgtgcg aggtgtgctt gatcgtgacc cgggggctgt agccgagctg caccgcctgc
      961 tgggtgagcg agaaggcgcc ggagatgagc gcctgggagg cgacgatggc cgccgccgtc
     1021 gccacgacga tcatcgggat caggagcggc gtcggcacca gcgcgtagaa ggggttgtgc
     1081 gcggccgacg gatcgtgcag gagcagcgca ccctgcccga aatagttgag cagcagggcc
     1141 ggcagcacca gcccgaacca cgccacccgg atcgggcgct tgccgaagtg tcccatgtcg
     1201 gcatagagcg cttcgccgcc ggtgaagacc agcaccaccg ccccgaggat gaggaacccg
     1261 cgcaggccgt cctcggcgaa gaagttcacg gcgtaccagg ggttgagcgc gcggatcacc
     1321 gacggatcga gcaggatccc gcggattccc agcagcgtga tgcagatgaa ccagatcagc
     1381 gtgatcggcc cgaagaccag gccgacgccg gcggtacccc gcttctggaa gaggaacagg
     1441 gcgagcagga tcgcgaccgt gatcggcacg acgaacggat cgaaggcggg cgcgacgact
     1501 ttgagcccct ccatcgcgcc cagcaccgaa atggccggcg tgatgactcc gtcgccgtag
     1561 agcagcgcgg cgccgaagag gccgagcaga aggaggaacc ggcggacccg gagattgccg
     1621 gtcgcgcgct tcgagcgcac gagcgccatg agcgccagga tgccgccctc gccccggttg
     1681 tcggcccgca tcaccagcga gatgtacttg aaggagacga cgaaattgag cgaccagacg
     1741 atcagtgaca ggatacccag gacgttgtcg accgtgggcg ggaggccgtg ctcgccggtg
     1801 aagcactccc ggagggcata cagcggactg gtgccgatgt cgccgtagac cacacccagc
     1861 gccgccagcg ccaacccggc gagcgcccgc ccgcggggcg gggccttcgt cccctccgac
     1921 acgtcagcgc gacgtcagcg aatccacgag ccgcgcgatc gcgtccgagt ccagccggcc
     1981 ctggtacagg cgccccccga tcaggagggt gggcgtggag ttgactccgg cgcgcacgcc
     2041 ttcgtcgtag ctcgcctgaa tgcggccggc atacttcgcc gacttcatgc aggcgtcgta
     2101 gcgagccggg tcgagcccgc tcagctgcgc atagcgccga aaggccggcg cggcatcgct
     2161 ggactcggcc cagtcctgct gcccctcgta gatccggcgg tgctgctccc agtacttgcc
     2221 ctgctcgtcc gcgcacgccg ccgagtgggc cgcgagccgg gagaacgggt gctgctgcag
     2281 cgggaagtcc cggta
//
LOCUS       DATIFF010000677         3097 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1932526, whole genome shotgun sequence.
ACCESSION   DATIFF010000677 DATIFF010000000
VERSION     DATIFF010000677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3097
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1932526"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(14..1372)
                     /gene="accC"
                     /locus_tag="VLD58_10030"
     CDS             complement(14..1372)
                     /gene="accC"
                     /locus_tag="VLD58_10030"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HSB54686.1"
                     /translation="MFKKVLIANRGEIALRVIRACRELGIGTVAVYSEADRESLHVRF
                     ADDDVCIGPPPGRQSYLRIPNLIAAAEITGADAIHPGYGFLAENAEFADTCKASNITF
                     IGPSGDQIRQMGDKATAKRLAQEAGVPTVPGTAGTIQDMDEALAQVESIGFPVIIKAT
                     AGGGGKGMRVANDPEQFTQVFSLAQNEALAAFGNGEVYVERYLARPRHVEIQVMGDTH
                     GRVVHFGERDCSVQRRHQKLIEESPSPALTPDLRERMGDAAVRLAAAIDYVGAGTLEF
                     LLDEDGSFYFMEMNTRIQVEHPVTEMVTSFDLVKEQIRVAAGEEISFRGEGGRLRGHA
                     IECRINAEDPYRNFQPSPGLITAYHPPGGPGVRLDTHVYAGYTVPPYYDSLLAKVIVH
                     GNTRAEALARMGQALDSFIIEGVTTTIPFLARIIRHPEFVSGQVDTKFLERHPELLRP
                     EA"
     gene            complement(1374..2561)
                     /locus_tag="VLD58_10035"
     CDS             complement(1374..2561)
                     /locus_tag="VLD58_10035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HSB54687.1"
                     /translation="MAETTAPANVLPPFNFKQAISLMVQRNGSDLHLKVGRPPTIRVN
                     GELNGLEMQPLKPEDLKLLAEQIMTPRQVKEFAEKKEADFAIGVPGVGRFRTNIYQQR
                     GTLAFAFRAIPYEVKTIRELHLPEVLEEIALRPRGLVLVTGVTGSGKSTSLAAMINHV
                     NQNRRVNIITIEDPIEFLHRDVQANISQREVGSDTLAFGMALRHVLRQDPDVILIGEI
                     RDNETLDVALKAADTGHLVFSTLHTTDATQTINRVISFYPPHQHQEIRSLLSTALAAV
                     ICLRLVPRKDGKGRVAAAEVLINTAAVADNIRDIEKALNIPDLIAEGTEAYGMQSFDQ
                     SLMKWYKDDVISYESALFYSTNPSEFALRASGISSASDRTFSGAVTGGAAKGGDLSND
                     LTP"
     gene            complement(2554..>3097)
                     /gene="accB"
                     /locus_tag="VLD58_10040"
     CDS             complement(2554..>3097)
                     /gene="accB"
                     /locus_tag="VLD58_10040"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HSB54688.1"
                     /translation="NPKDAQDLAKVLAKQPGIRSVDLKDVRKLAELLQEFPEIGSIEV
                     KGWFDTGVTITRTGNSNHVPGPVAMAMQHPVMAPPPPAPVSAPAAAAAPAAPAGGALK
                     DIKSPMVGTFYKSPEPGAEAYVKVGGRVTQGQTVCIIEAMKIMNEIEAEVTGVVREVL
                     VEDSQPVEFGTVLFRVDPNG"
BASE COUNT          473 a         1003 c         1062 g          559 t
ORIGIN      
        1 acgacgtcca gcttcatgct tcggggcgga gcagctccgg atggcgttcg aggaacttcg
       61 tgtccacctg tccggagacg aattcggggt ggcggatgat gcgggcaagg aaaggaatcg
      121 tggtggtgac cccttcgatg atgaagctgt cgagcgcctg tcccatgcgg gcgagggcct
      181 cggcccgggt gttcccgtgc acgatcacct tcgcgagcag cgagtcgtag tacggcggca
      241 cggtgtagcc ggcgtacacg tgggtatcga ggcgcacgcc cggaccaccc gggggatgat
      301 aggcggtgat gagccccggc gacggctgga agttgcggta cggatcttcg gcgttgatcc
      361 ggcattcgat ggcgtggccc cggagccggc cgccctcgcc ccggaagctg atttcctcgc
      421 cggccgccac ccggatctgt tccttgacca ggtcgaagct ggtgaccatc tcggtcaccg
      481 ggtgctccac ctggatccgg gtgttcattt ccatgaaata gaagcttccg tcttcatcga
      541 gcaggaattc gagggtcccg gcgccgacat agtcgatcgc cgccgcgagg cgcaccgcgg
      601 catcgcccat gcgctcccgg aggtccgggg tgagcgcggg gctcgggctc tcctcgatga
      661 gcttctggtg gcgccgctgc accgagcagt cgcgctcccc gaagtgcacc acccggccgt
      721 gggtgtcgcc catcacctga atctcgacgt ggcggggccg cgcgagatac ctctcaacat
      781 acacctcgcc gttgccgaag gcggccagcg cctcgttctg cgccagcgag aagacctggg
      841 tgaattgctc cgggtcgttg gcgacccgca tgcccttccc gcccccaccg gcggtggcct
      901 tgatgatcac cgggaagccg atcgactcga cctgggccag cgcctcgtcc atgtcctgga
      961 tggtgccggc ggtgcccggg acggtcggaa cacccgcctc ctgggccaga cgcttggcgg
     1021 tggccttgtc gcccatctgc cggatctggt cgccggaggg gccgatgaac gtgatgttcg
     1081 aggccttgca ggtgtcggcg aactcggcat tctcggccag gaagccgtac ccggggtgga
     1141 tagcatcggc gccggtgatt tccgcggcgg cgatgagatt gggaatgcgg aggtacgact
     1201 ggcggccagg gggcggcccg atgcagacgt cgtcgtcggc aaagcggacg tgcagcgatt
     1261 cccggtcggc ctcgctgtag acggcgacgg tgccaatgcc gagctcacgg caggcgcgga
     1321 tcacgcgcag cgcgatctcg ccccgattgg cgatcaggac tttcttgaac acgtcagggc
     1381 gtcaggtcgt tggagagatc gccgcccttg gcggcgccac cggtgaccgc cccgctgaac
     1441 gtccggtcgg acgcggagct gatgcccgag gcgcggagcg cgaactcgct cggattggtc
     1501 gagtagaaca gcgcgctctc gtaggaaatg acatcgtcct tgtaccactt catgagcgac
     1561 tggtcgaagc tctgcatccc gtacgcctcg gtgccttcgg cgatcaggtc ggggatgttg
     1621 agcgccttct cgatgtcccg gatgttgtcc gccaccgcgg cggtgttgat cagcacttcg
     1681 gccgcggcca cccgcccctt cccgtccttc cgcggcacca gccggagaca gatcacggcc
     1741 gcgagggcgg tcgagagcag cgaccggatt tcctggtgct ggtgcggcgg gtagaaggag
     1801 atcacccggt tgatggtctg ggtggcgtcg gtggtgtgga gcgtggagaa caccaggtgg
     1861 ccggtatcgg ccgccttgag cgccacatcc agcgtctcgt tgtcgcggat ctcgccgatc
     1921 aggatgacgt cggggtcctg ccgcagcaca tgccgcaggg ccatgccgaa cgccagggtg
     1981 tcgctaccca cctcgcgctg cgagatattg gcctgcacgt cgcggtggag gaactcgatc
     2041 gggtcttcga tcgtgatgat gttcacccgc cggttctgat tgacgtggtt gatcatcgcg
     2101 gcgagcgagg tcgacttgcc cgagccggtc accccggtca ccagcaccag gccgcggggc
     2161 cggagcgcga tctcctccag cacctcggga agatgcagct cgcggatggt cttcacctcg
     2221 tagggaatcg cccggaaggc gaaggcgagg gtgccgcgct gctggtagat gttggtccgg
     2281 aagcgcccca cccccggcac gccgatggcg aagtccgctt ccttcttctc ggcgaactcc
     2341 ttcacctgcc gcggggtcat gatctgctcg gccaggagct tgagatcctc cggcttgagc
     2401 ggctgcatct cgaggccgtt cagctcgcca ttcacccgga tggtgggcgg gcggccgacc
     2461 ttgaggtgga ggtcggagcc gttccgctgc accatcagcg aaatggcctg cttgaagttg
     2521 aacggcggga gaacgttcgc cggcgccgtc gtctcagcca ttgggatcca cccggaagag
     2581 gacggtgccg aactcgaccg gctgggagtc ctcgaccagg acctcccgca ccacgccggt
     2641 gacttcggcc tcgatctcgt tcatgatctt catcgcttcg ataatgcaga cggtctgccc
     2701 ctgggtgaca cggccaccca ccttcacata ggcctccgcg cccggttcag gcgacttgta
     2761 gaacgtgccc accatcggcg acttgatgtc cttgagcgca ccacccgcgg gcgcggccgg
     2821 tgccgccgcg gcggccggtg ccgacacggg cgccggcggc ggcggcgcca tcaccgggtg
     2881 ctgcatcgcc atcgcgaccg gccccggcac atggttggag ttgccggtgc gtgtgatggt
     2941 cacgccggta tcgaaccacc ccttgacctc gatggatccg atctcgggaa attcctgcag
     3001 cagctccgcc agcttgcgga catccttgag atcgactgac cggatgccgg gctgcttggc
     3061 gagcaccttt gcgagatcct gggcgtcctt gggattc
//
LOCUS       DATIFF010000678         1601 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1471178, whole genome shotgun sequence.
ACCESSION   DATIFF010000678 DATIFF010000000
VERSION     DATIFF010000678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1601
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1471178"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..446)
                     /locus_tag="VLD58_10045"
     CDS             complement(<1..446)
                     /locus_tag="VLD58_10045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HSB54689.1"
                     /translation="MSIERKPVYGARDLAGWDPAAQLGAPGAYPFTRGIHPTMYRGRL
                     WTMRQFAGFGTAADTNRRYKVLLARGQTGLSVAFDFPTLMGYDSDHPRAEGEVGKCGV
                     AISSLADMETLFDGIPLDQVSTSMTINGPAAILFCFYVAAAERQGVP"
     gene            complement(443..>1601)
                     /gene="meaB"
                     /locus_tag="VLD58_10050"
     CDS             complement(443..>1601)
                     /gene="meaB"
                     /locus_tag="VLD58_10050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0015819 - lysine transport [Evidence IEA];
                     GO_process: GO:0015822 - ornithine transport [Evidence
                     IEA];
                     GO_process: GO:1903826 - L-arginine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HSB54690.1"
                     /translation="RSGAASAGADGGAGRRRDMTAPGSVASVLDGLDRGETAALARAI
                     SLVENQRDGYERVLSHVHERAGRLGERARRIGITGPPGAGKSTLTQLLIQQYRGAGLK
                     VAVVAVDPTSPFSGGALLGDRIRMEAVSLDPGVFIRSMATRGSLGGLATTTEEVCEVL
                     TAFGFERILIETVGVGQTELDVARTAETTALVLVPESGDAIQTLKAGVMEVADIFVVN
                     KADRPGAERLQRDIEVMLGIRRGTAFRHVSPHHGPRLQADRRMDRSTDGMSSEPHPPI
                     RPSADPPRWEPPVLLTVATRGDGVGELVEALERHRGYLEASGLLGRRRRERLAERTRA
                     AVNRALAHWVWEQTAAETLLGEALDDMSAGKRSPYEVAAALVDHARTGATR"
BASE COUNT          235 a          602 c          530 g          234 t
ORIGIN      
        1 ggcacaccct ggcgctcggc cgccgccacg tagaagcaga acaggatcgc cgccggcccg
       61 ttgatggtca tcgaggtcga gacctgatcg agcggaatgc cgtcgaagag cgtctccatg
      121 tcggcgaggc tcgagatcgc gacaccgcac ttccccacct cgccttccgc gcggggatga
      181 tcggagtcgt agcccatcag cgtcggaaaa tcgaaggcca ccgacaggcc cgtctggccc
      241 cgcgccagca ggaccttgta gcggcggttg gtgtccgccg cggtgccgaa gcccgcgaac
      301 tggcgcatgg tccacagccg gccgcggtac atcgtgggat ggatcccgcg ggtgaacggg
      361 tacgcgccgg gcgcgccgag ctgggcagcg gggtcccacc ccgcgaggtc ccgggcacca
      421 tagaccggct tccgctcgat gctcatcgcg tggctcccgt tctcgcgtga tccacgaggg
      481 ccgcggccac ttcgtaggga ctgcgctttc ccgccgacat gtcgtccagg gcctccccga
      541 gcagggtctc cgcagcggtc tgctcccata cccaatgcgc cagcgcccgg ttcaccgcgg
      601 cccgcgtccg ctcggcgagc cgctcccgcc gccgacgccc aagcaggccg cttgcctcaa
      661 ggtagccacg gtggcgctcc agtgcctcca ccagctcgcc cacgccatca ccgcgggtgg
      721 cgaccgtcag caggaccggc ggctcccacc tcggcggatc ggcggatggc cggatgggcg
      781 gatggggctc gctcgacatg ccatccgtcg atcggtccat ccgccgatcc gcctggaggc
      841 ggggtccgtg gtgcggagac acatgccgga acgcggtgcc ccgacggatt cccagcatca
      901 cctcgatgtc ccgctgcagc ctctcggcac cggggcggtc cgccttgttc accacgaaga
      961 tgtcggccac ttccatgacg cccgccttca acgtctggat cgcatcgccc gattccggga
     1021 ccagcacgag tgcggtggtt tccgcggtac gggccacgtc cagctccgtc tggcccaccc
     1081 cgaccgtctc gatgaggatg cgctcgaacc cgaacgccgt cagcacctcg cacacttctt
     1141 cggtcgtcgt cgcgaggccg ccgagcgagc cccgggtcgc catggaccgg atgaagactc
     1201 cgggatcgag gctgacggcc tccatgcgga tccggtcgcc caacagggcg ccgccgctga
     1261 agggactcgt cgggtccacg gccacgactg caaccttcag gcccgcgcca cgatactgct
     1321 ggatcagcag ctgggtgagc gtgctcttgc cggccccggg ggggccggtg atgccgatgc
     1381 gccgggcgcg ctcaccgaga cggccggccc gctcgtgcac atggctgagc acgcgctcgt
     1441 atccgtcccg ctggttctcg acgaggctga tcgcccgggc gagggcggca gtctcgcccc
     1501 gatcgaggcc gtcgagcacc gaagcgacgg aaccgggagc cgtcatgtct cgccgccttc
     1561 cagcaccacc gtccgcaccg gcgctcgccg caccgctacg c
//
LOCUS       DATIFF010000679         1756 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_701861, whole genome shotgun sequence.
ACCESSION   DATIFF010000679 DATIFF010000000
VERSION     DATIFF010000679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_701861"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..200
                     /locus_tag="VLD58_10055"
     CDS             <1..200
                     /locus_tag="VLD58_10055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54691.1"
                     /translation="LGDAERCRAVLEEGGRPAAVPEDRALGPGAEEAFGLVKVYRKGD
                     LEDQDQMDFGHACGAVDDGRA"
     gene            328..978
                     /locus_tag="VLD58_10060"
     CDS             328..978
                     /locus_tag="VLD58_10060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54692.1"
                     /translation="MVLLTRAEVGRRLAQGLGAMLTEEPVVLALTPGGVCVASEVASE
                     LHAPLDVLAAHRLDVPGRPRSTFGAVADGHVLLLEDRIRELQLPADYVAGLVNRVRRE
                     VEHEAATLRNGQPAVPLVHRVVVLVDDGSSEAVQVASAVTALRRAGAEQVIFAAPTAS
                     AELWRALVGLCDQRLVLFEPAGQVKTVVCDPEFAHTTHYDVRAMVRRSREHLAIPS"
     gene            1028..>1756
                     /locus_tag="VLD58_10065"
     CDS             1028..>1756
                     /locus_tag="VLD58_10065"
                     /inference="COORDINATES: protein motif:HMM:NF017085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAD domain-containing protein"
                     /protein_id="HSB54693.1"
                     /translation="MTGVLGTRADRLRRLTDDLAGAADPDPELIHQIRVAARRLQAAL
                     SVFRPLADLPPAVRVSRIRRVERRLGGLRDLDVLAGSLLPGELPSLSAEAGADLTRLR
                     QVLLQERDPALRRARRAVTRTGYERALRALRTWLDAPEFSPAAMHPATEVAPDLVFPS
                     FARVLLDRAWWTETIPAPDDPAAKVLHRLRRRIKALRYRAECLSGCYGDSLTSWLQRL
                     HAIQNGLGQYHDGAVLLGRLGEGSG"
BASE COUNT          237 a          580 c          650 g          289 t
ORIGIN      
        1 tcctgggtga cgcggagcgg tgcagggcgg tactggaaga gggaggtcgc cctgccgcgg
       61 tgccggaaga tcgggcgctc ggtcccggcg ccgaggaggc gttcggcctg gtcaaggtct
      121 atcgcaaagg agacctcgaa gaccaggatc agatggattt cgggcatgcc tgtggggcgg
      181 tagatgacgg tcgagcctga cctcggacga gaatagcccg gaccggcgat ggcgggaagc
      241 ctgtcatggg tcgggactca ccggcccttc acgattcgct catgggttgc tgccaagatt
      301 gcactgattg ctaacacgag agcgcatatg gtactgctga ccagggccga ggttggacgc
      361 cgcctggcgc aggggctggg ggcgatgctc accgaggagc ctgtggttct ggctctcacg
      421 ccgggcgggg tctgcgtcgc cagcgaggtg gccagcgagc tgcacgctcc cctggacgtg
      481 cttgccgcac accgcctgga cgtgccgggc cgaccgcgct ccacattcgg tgcggtggcc
      541 gacggccacg tcctgctcct ggaagaccgg atccgcgaac tgcagctccc cgcggattac
      601 gtggccgggc tcgtgaaccg ggtccggcgg gaggtcgagc acgaagcggc gaccctgcgt
      661 aatggccagc ccgcggttcc cctggtccat cgggtggtgg tcctggtgga tgatggctcg
      721 agcgaagcgg tgcaggtagc cagcgccgtg accgccctcc ggcgcgcggg ggcagagcag
      781 gtgatcttcg cggcgccgac cgccagtgcg gagttgtggc gggcgctggt cggtctctgc
      841 gaccagcgtc tggtcctgtt tgagccggcg ggacaggtca agacggtcgt ctgcgatccc
      901 gagttcgctc acaccacgca ctacgatgtc cgcgccatgg tccgtcggag ccgggagcac
      961 ctggcgatcc cctcctgagc ggtttccccc gcccgttcgc acggatggcg tgccggcggc
     1021 ctccctcgtg accggggtac tgggcacccg agccgaccgg ctccggcgcc tcactgacga
     1081 cctggctggc gcggccgatc cagaccccga gctgatccac cagattcgcg tggccgcccg
     1141 gcggctccag gccgcgcttt cggtgttccg cccactggcg gatctgcctc cggccgtcag
     1201 agtgtcgcgg attcgacggg tcgagcgtcg cctcggtggc ttgcgtgacc tggatgtcct
     1261 ggctggttcc ctccttcccg gtgagctccc ttccctgagt gccgaggccg gtgccgacct
     1321 gacccggctg cgccaggtcc tgctgcagga gcgggatccg gcgcttcgga gggcccggcg
     1381 cgcggtgaca cggacggggt acgagcgcgc actccgggcg ctgaggacct ggcttgacgc
     1441 accggagttt tcccccgctg cgatgcatcc ggccaccgag gtggccccag acctggtgtt
     1501 cccctcgttt gcgcgagtgc tgctcgaccg cgcctggtgg acagagacga ttccggcgcc
     1561 ggatgacccg gcggcgaagg tgctgcatcg gctccggcgg cggatcaagg cgctgcgcta
     1621 ccgggcggaa tgcctgtccg gctgctatgg cgacagcctg acgtcctggc tgcagcggct
     1681 ccacgccatc cagaacgggc tcggccagta ccacgacggg gcggtcctgc tcgggcggct
     1741 gggggaggga agcgga
//
LOCUS       DATIFF010000680         1011 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2086876, whole genome shotgun sequence.
ACCESSION   DATIFF010000680 DATIFF010000000
VERSION     DATIFF010000680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2086876"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1011)
                     /locus_tag="VLD58_10070"
     CDS             complement(<1..>1011)
                     /locus_tag="VLD58_10070"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HSB54694.1"
                     /translation="YRHRYLIAFAVVSASVLELVDTSIVNVAIPHMMGNLGATLDEIA
                     WVSTGYIVANVIILPLTSWLSDRFGRRNYYTGSIILFTVASFLAGNAHTLTELVGARV
                     IQGIGGGALISTAQAILFDVFPLHERGKAMAIFGMGVMVGPTLGPTLGGWITDNYSWP
                     WIFYINIPLGILAAMMTWRFVPEPFHANERADHIDWLGLALLIAGIGSLQIMLERGES
                     KDWFQTTEIRVEAVVAAISLAWFVWHELRTDHPVVDLRILRNRQLASGVVFGLILGFA
                     LYASVFALPVFLQTWRGYTAWDTGKVILPGAIASAITMAITGRITGKMDARYLIVLGV
                     GL"
BASE COUNT          188 a          330 c          345 g          148 t
ORIGIN      
        1 aagagcccca ccccgagcac gatcaggtag cgcgcatcca tcttcccggt gatccggccg
       61 gtgatcgcca tggtgatggc gctggcaatc gctcccggca ggatcacctt ccccgtgtcc
      121 caggcggtgt agccgcgcca ggtctggagg aacaccggca gggcaaagac gctggcgtac
      181 agggcaaacc cgaggatcag cccaaagacc acgcccgagg ccagctgccg gttccgcagg
      241 atccggaggt ccaccaccgg atggtcggtg cggagctcgt gccacacgaa ccaggcaagg
      301 gagatcgcgg cgacgaccgc ctcgacccgg atctcggtcg tctggaacca gtccttcgac
      361 tcgccccgct ccagcatgat ctgcagcgac ccgatccccg cgatcagcag cgccaggccc
      421 agccagtcga tgtggtccgc ccgttcgttg gcgtggaacg gctccggcac gaagcgccag
      481 gtcatcatcg ccgccaggat gccgagcggg atgttgatgt agaagatcca gggccaggag
      541 tagttgtcgg tgatccaccc gcccagcgtc gggcccaggg tcgggccgac catgacgccc
      601 atgccgaaga tcgccatcgc cttgccgcgc tcgtgcagcg ggaagacgtc gaacagaatg
      661 gcctgcgcgg tggagatgag ggcgccgccg ccgatgccct gaatcacccg ggcgccgacc
      721 agctccgtca gggtgtgggc gttcccggcg aggaacgagg ccacggtgaa gaggatgatc
      781 gagccggtgt agtagttccg ccggccgaag cggtcggaga gccagctggt cagcggcagg
      841 atgatcacgt tggcgacgat gtatccggtg ctcacccagg cgatctcgtc gagggtggcg
      901 ccgagattgc ccatcatgtg cggaatcgcc acgttcacga tgctggtgtc caccagctcg
      961 agtacgctgg cggacaccac cgcgaaggcg atcaggtagc ggtgccggta g
//
LOCUS       DATIFF010000681         1449 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1932853, whole genome shotgun sequence.
ACCESSION   DATIFF010000681 DATIFF010000000
VERSION     DATIFF010000681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1449
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1932853"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..450
                     /locus_tag="VLD58_10075"
     CDS             <1..450
                     /locus_tag="VLD58_10075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54695.1"
                     /translation="AAHLTIHQDQALGPQPLLNLSLQPGDSVRILLSLLEADQVQLPA
                     ETEAAGAATAVLDQPPETRAPLPASALAPVTRRGAHWLGSVALLLTNEGGTTYWRTFE
                     CVATCRVLKGPSTSALAAKPAAPLAGVVELTGAGATYHLQLQGAKEP"
     gene            458..997
                     /locus_tag="VLD58_10080"
     CDS             458..997
                     /locus_tag="VLD58_10080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54696.1"
                     /translation="MNNAAPTAWLPASHTRSRSVMLALGVIIGLETLGLHLWLRQRHP
                     ALAWTSTGLSLLGLAWLAGDYRALSTAGLLLGSGGCEVRIGARARADVPWTAVEQIRV
                     PTWRDLPGPSPEYLNTARPDDPNVLFTFRTPVVLRSVVGRRRVRQLGLRVTEPQRVVE
                     HWQQWVPSGAPDTEPTTAA"
     gene            1152..1328
                     /locus_tag="VLD58_10085"
     CDS             1152..1328
                     /locus_tag="VLD58_10085"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSB54697.1"
                     /translation="MSLQLAFRVPPRDVDRCAAELAEAGVPILLPPTDQPWGHRTLFF
                     RDPDGNVLEVYAEI"
BASE COUNT          204 a          551 c          468 g          226 t
ORIGIN      
        1 gccgcccacc tgaccatcca ccaggaccag gctttgggcc cccagccgct ccttaacctc
       61 agcctccagc ccggtgacag cgtccgcatc ctgctgtcgc tgctggaggc cgatcaggtg
      121 cagctgccgg ccgaaaccga ggccgccggc gcggccaccg ccgtgctgga tcagcccccg
      181 gaaacccgcg ccccgctgcc cgcgtccgcc ttggccccgg taacccggcg cggcgcccat
      241 tggctgggct cggtcgccct gctgttgacg aacgaaggcg ggactaccta ctggcggacc
      301 ttcgaatgcg tggccacgtg ccgcgtcctc aaggggccga gcaccagcgc gctggccgcg
      361 aagcccgccg cccccctcgc cggggtggtc gaactcacgg gggccggcgc cacctatcac
      421 ctgcaactgc agggcgcgaa ggaaccctag atccgtcgtg aacaacgccg caccgaccgc
      481 gtggctgccg gcttcccaca cccgctcccg gagcgtcatg ctcgcgctcg gagtcatcat
      541 cgggctggag acactggggc tgcatctctg gcttcgccag cgccatcctg cgctcgcctg
      601 gacctcgacc ggcctcagcc tgctcggact ggcgtggctg gcaggggact atcgtgcgct
      661 gtccacggcc ggcctgctcc tcggctccgg gggctgcgag gttcgcatcg gcgcccgcgc
      721 tcgggccgac gtcccctgga cagcagtcga gcagatccgg gtgccgacct ggcgtgactt
      781 gcccgggccg tcgccggagt atctgaacac cgcccggccg gatgatccga acgtgctgtt
      841 caccttccgc acgccagtgg tcctgcgaag cgtcgtaggc cgccggcgag tgcgccagct
      901 cggtcttcga gtgacagagc cccagcgggt cgtcgagcac tggcagcaat gggtgccaag
      961 cggggcgcct gacacggagc ccacaaccgc cgcctgaccc gcgcgcacga gccgtccccc
     1021 atgctcatcg agaacgggct tcgttgcgct cgcggactcg cggagccccg aagttgttca
     1081 ccaccccgtt tcgcctgatg cgcgggctgc tacggacgcg gcgagcgcga cccccgaccc
     1141 ccgcaggtgc cttgtccctg cagctcgcgt tccgggtccc gccgcgggac gtggaccgat
     1201 gcgccgccga gctcgcagaa gccggtgttc cgatcctgtt gccgccgacc gatcaaccat
     1261 ggggtcatcg gaccctcttc tttcgggacc ccgacggcaa cgtgctcgag gtctatgcgg
     1321 aaatctgagc cgtcgaggct actccggcat gttactctcc ctcccaggtt tcagcgtgcg
     1381 tgattggcag ccgggggatg ccccggccct ggcccagcac ggcaatgatc ggcgcatctg
     1441 gctcaacat
//
LOCUS       DATIFF010000682         4472 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1624259, whole genome shotgun sequence.
ACCESSION   DATIFF010000682 DATIFF010000000
VERSION     DATIFF010000682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4472
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1624259"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            93..1463
                     /locus_tag="VLD58_10090"
     CDS             93..1463
                     /locus_tag="VLD58_10090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB54698.1"
                     /translation="MLAWRDLAIHGGFSLRIALEAVRHNKLRASLTSLGILFGVASVI
                     AMLAVGKGAEQEILEQMRLLGSNNVMIAPLVEQKDEQAKDDTQKEVKKYTPGLTYADA
                     QAIARIIPDVEVTSAEIVMNTTITREGHRRSGKVLGVDTTYFRLTNLELARGGWFSPA
                     QVERGLPVAIIGQGVSSRFFTTEDPIGRRIKVGDIWLTVAGVLQDRRVSSETAQRLGI
                     RDASMDVYIPVHTMLLRYRDRSRITQRDVEVAASRDDEDENKVQGTEELRKERSNLNQ
                     LDRIIVRVRQASMVPPVADVTRRMLTRRHNGVVDFEITVPELLLRQEQRTKTIFNIVL
                     GAIASISLIVGGIGIMNIMLASVLERIREIGVRRAVGASEKEILLQFLSEAVIISVSG
                     GIAGIVLGFVLSSVIEQVAGVRTIVSYPSVAVAFGVSFAVGIVFGIMPAYRAARQDPV
                     VCLRYE"
     gene            1468..2913
                     /locus_tag="VLD58_10095"
     CDS             1468..2913
                     /locus_tag="VLD58_10095"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSB54699.1"
                     /translation="MRLRVLAALAQLGGAAPLRAQEPLTLQRAVELAWSAGYDAKAAE
                     AARDGSRYRERAFYSRQLPRLALNGTIPSYNRSIIQVLQPDGSTSFRPQDQVTTELTA
                     TMSQTLPLTGGDFFVSSSLSRLKVTGQETIKTWSSTPVTVGLRQPILRPNLNAWDRRE
                     QPVRSELSERQYREAREDIALRTTSLFFDVYSAKVGLANASTNAAVNDTLYTLNKGRF
                     EVGKIGENDLLQSELALLRARNAADAARLEYDRALAALRLALGMTPGAPLEISVSREI
                     PRFDADTTRAEAEALRNRSVVTGAELAEVQANRRVTEARLNNGLGATVQASYGFNATS
                     GQVSGAYQDLQEARQFSLSVEVPLVQWGVRSHSIQAAKADREQIDNQNRSNLAETALE
                     AHFAVLELELARRNVELSAKGDTVANRRFEVAYNRYVVGRITVDNLYIAQAEKDQALS
                     GFVQALRGYWLAHYGLRRATLYDFESNSAIR"
     gene            complement(2978..3064)
                     /locus_tag="VLD58_10100"
     tRNA            complement(2978..3064)
                     /locus_tag="VLD58_10100"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3028..3030),aa:Ser,seq:tga)
     gene            3149..>4472
                     /locus_tag="VLD58_10105"
     CDS             3149..>4472
                     /locus_tag="VLD58_10105"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB54700.1"
                     /translation="MAPTTEFCPGCGTPLTGEARFCMHCGRPAQGSGCLSSSDALREQ
                     LVQATQGEYEVLNELGRGGMAAVYLGRDLSLGRHVAIKVMIPGLDATAGMADRFLLEA
                     RTAAQLSHANIIPIYAVRTTGELRYFVMKFIPGRSLDQILAAEGPLSPDLVQAVLAQV
                     GSALEHAHARGVVHRDIKPANIMIDEDGSAIVADFGIAKVAQGGNMTRTGVTIGTPAY
                     MSPEQCTGQPVAGASDQYALGCVAFELLSGHPPFVHEEPVPVLLAHVSDPAPPLLPIR
                     KDCPLPLAAAIDRMLAKSPAERWPTLAEAIEAAEALAPALDPEVRKRLRQLAAVLALP
                     EYTPPPSPPANPTLRTPAPATSAPQALRINLEPHAARIVTGESLKLDAALLDAGGTAV
                     PGAPLRWRSRTPEIASVSDGGVVTGLSEGQSVVTAACGHISAEVQIQVD"
BASE COUNT          732 a         1575 c         1491 g          674 t
ORIGIN      
        1 gacaccgcgc cctcgcccac gccgctcccg gtccggcccg acagcggcgc caggacacag
       61 cccaagccgg ccgcggcccc caggaagagc tgatgctggc ctggcgagat ctggcaatcc
      121 acggcgggtt cagcctgcgg atcgcgctgg aggcggtgcg tcacaacaag ctgcgcgcct
      181 cgctcacctc gctgggcatc ctcttcgggg ttgcctcggt gatcgcgatg ctggcggtgg
      241 ggaagggagc cgagcaggaa atcctggagc agatgcgcct gctgggttcc aacaacgtga
      301 tgatcgcgcc gctggtggaa cagaaggacg agcaggcgaa ggacgacacc cagaaggagg
      361 tcaagaagta cacccccggc ctgacctacg ccgacgccca ggccatcgcc cgcatcatac
      421 ccgatgtcga agtgaccagc gccgagatcg tgatgaacac cacgattacc cgtgaggggc
      481 accgccgctc cggcaaggtg ctcggcgtcg ataccaccta cttccggctg acgaacctgg
      541 agctggcgcg aggcggctgg ttctccccgg cccaggtgga gcggggtctc cccgtcgcga
      601 tcatcggtca gggcgtgagc tcccggttct tcaccaccga agacccgatc ggccgccgga
      661 tcaaagtggg cgacatctgg ctgaccgtcg ccggggtgct ccaggaccgc cgggtgagct
      721 cggagaccgc ccagcggctc ggaatccggg atgcgagtat ggacgtctac atcccggtcc
      781 acacgatgct gctccgctat cgcgaccgga gccggatcac ccagcgcgac gtcgaggtcg
      841 ccgcctcgcg cgacgacgaa gacgagaaca aggtccaggg caccgaggag ctccgcaagg
      901 aacgcagcaa cctgaatcag ctggaccgca tcatcgtccg ggtccggcag gcgagcatgg
      961 tcccgcccgt cgccgacgtc acccgccgga tgttgacccg ccggcacaat ggggtggtgg
     1021 acttcgaaat caccgtcccc gagctgctgc tccgccagga gcagcgcacc aagaccatct
     1081 tcaacatcgt cctcggcgcc atcgcatcga tctcgctcat cgtgggcggg atcgggatca
     1141 tgaacatcat gctggcgtcg gtgctggagc ggatccggga gatcggagtg cgccgggcgg
     1201 tgggagcctc ggagaaggag atcctgctcc agttcctgag cgaggcggtg atcatcagcg
     1261 tgagcggcgg catcgccggc atcgtgctgg gcttcgtgct cagcagcgtg atcgagcagg
     1321 tcgccggggt ccggaccatc gtgtcgtatc cctcggtcgc ggtcgcgttc ggggtgtcgt
     1381 ttgccgtcgg aatcgtgttc gggatcatgc ccgcctatcg cgcggcgcgg caggacccgg
     1441 tcgtctgtct ccgctacgag tgagcccatg cgactccgtg tccttgccgc gctggcccag
     1501 ctgggcggcg ccgcaccgct ccgtgcccag gaacccctca ccctgcagcg ggccgtcgag
     1561 ctggcctggt cggccggcta cgatgccaag gcggccgagg cggcccggga cggctcccgc
     1621 tatcgcgagc gggccttcta ctcccggcag ctgccgcggc tggcactgaa tggcaccatc
     1681 ccctcctaca atcgctccat catccaggtg ctgcagcccg atggcagcac cagcttccgg
     1741 ccccaggacc aggtgacaac cgagctcacg gccaccatgt cgcagacgct gccgctcacc
     1801 gggggcgact tcttcgtctc gagttcgctc tcccggctca aggtgaccgg acaggagacc
     1861 atcaagacct ggtcctcgac cccggtcacg gtggggctcc gccagccgat tctccggccc
     1921 aatctcaacg cctgggaccg gcgggagcag ccggtgcgat ccgagttgag cgaacgccag
     1981 tatcgcgagg cccgggagga catcgcgctc cggaccacca gcctgttctt cgacgtgtac
     2041 tccgccaagg tggggctggc caatgccagc accaacgcgg cggtgaatga cacgctctac
     2101 acgctcaaca agggccgctt cgaagtcggc aagatcgggg agaacgacct gctccagagc
     2161 gagctggcgc tgctgcgggc ccggaacgcc gcggacgctg cccggctcga atacgaccgg
     2221 gcgctcgccg ccctgcgcct ggccctggga atgacgcccg gggcgccgct cgagatctcg
     2281 gtctcgcgcg agattccccg tttcgatgcc gacacgaccc gcgccgaggc cgaggccctc
     2341 cggaaccggt cggtggtgac gggggcggag ctcgcggagg tgcaggccaa tcggcgggtg
     2401 acggaagccc ggctcaacaa cgggctgggt gccacggtac aggccagcta cgggttcaac
     2461 gccacctccg gccaggtgag cggcgcctat caggatcttc aggaggcacg gcagttttcc
     2521 ctgtcggtcg aggtcccgct ggtacagtgg ggggtgcgca gccattcgat ccaggctgcc
     2581 aaggccgacc gggagcagat cgacaaccag aaccggtcca atctggcgga gaccgccctg
     2641 gaggcgcact tcgcggtgct ggagctggag ctggcacgcc ggaatgtcga actctcggcc
     2701 aagggcgaca ccgtcgccaa tcggcgcttc gaggtggcct acaaccgcta tgtggtgggg
     2761 agaatcacgg tggacaacct gtacattgcc caggcggaga aggaccaggc gctgagcggc
     2821 ttcgtgcagg cactccgggg ctactggctg gcccactacg gcctgcgccg ggccacgctc
     2881 tacgacttcg agagcaactc agcgattcgc tgagaaggcg gccgcgcggc aaagcggcct
     2941 gtagtaggac cggccgcctt gccgctttgc cgccttacgg agcgggaggg attcgaaccc
     3001 ccggaaccct tgcgggctct ccagttttca agactggcgc attaaaccac tctgccaccg
     3061 ctcctcgcgg ggaaaaacta cgcagcccct gccagccgcg ccatcgggcc ggctaacggc
     3121 cgacggcaaa ccgccgatac ttcgggcgat ggctccgacc actgaattct gccccgggtg
     3181 cggcaccccg ctgacgggag aggcccgctt ctgcatgcac tgcggccgtc cggcgcaggg
     3241 cagcggctgc ctctccagca gcgatgcgtt gcgggagcag ctggtccagg ccacccaggg
     3301 ggaatacgag gtcctgaacg agctgggacg gggcggcatg gccgccgtct acctcggccg
     3361 ggacctctcg ctgggccgcc acgtggcgat caaggtcatg atcccggggc tcgatgccac
     3421 cgcggggatg gccgaccgct tcctgctcga ggcccgcacc gcggcccagc tctcgcacgc
     3481 caacatcatc ccgatctacg cggtccgcac caccggcgag ctgcgctact tcgtgatgaa
     3541 gttcatcccc ggtcgctcgc tggatcagat ccttgccgcc gaaggcccgc tgtcacccga
     3601 cctggttcag gccgtcctgg cgcaggtggg atctgcgctg gagcacgccc atgcccgtgg
     3661 cgtggtgcac cgcgacatca agccggccaa catcatgatc gacgaggatg gctccgccat
     3721 cgtcgccgat ttcggcatcg ccaaggtggc gcagggcggg aacatgacgc ggaccggggt
     3781 gaccatcggc acgccggcct acatgtcgcc cgaacagtgc accggccagc ccgtcgccgg
     3841 cgcgtcggac cagtatgccc tcggttgtgt cgcgttcgag ctcctgagcg ggcatccgcc
     3901 cttcgtccac gaagaaccgg tgccggtgct gctggcgcat gtctccgatc ccgccccgcc
     3961 gctcctgccg atccgcaagg actgtcccct cccgctcgcg gccgccatcg accggatgct
     4021 ggccaagtcc ccggccgagc gctggccgac cctggcggag gccatcgagg cggccgaggc
     4081 gctggcgccc gcgctcgatc ccgaggtccg caagcgcctc cggcagctcg ccgccgtgtt
     4141 ggcgctgccc gagtacaccc ctccgccgag tccgcccgcc aatcccacat tgcggactcc
     4201 tgcgcccgcc acctccgcgc cgcaggcact ccggatcaac ctggaaccgc atgcggcgcg
     4261 tatcgtcacc ggggagtcgc tcaagctcga tgccgcgctc ctcgatgccg gtggaacagc
     4321 ggtcccgggt gcaccgcttc gctggcggtc ccggacccct gaaatcgcat cggtatcgga
     4381 tggtggcgtc gtgaccgggc tctccgaggg gcagagcgtg gtgaccgctg cctgtgggca
     4441 catctccgcc gaagtccaga tccaggtcga tc
//
LOCUS       DATIFF010000683         1254 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1778810, whole genome shotgun sequence.
ACCESSION   DATIFF010000683 DATIFF010000000
VERSION     DATIFF010000683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1778810"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(80..658)
                     /locus_tag="VLD58_10110"
     CDS             complement(80..658)
                     /locus_tag="VLD58_10110"
                     /inference="COORDINATES: protein motif:HMM:TIGR02999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF-type sigma factor"
                     /protein_id="HSB54701.1"
                     /translation="MEHDSQAQSGTPFDGADSRAADELFTMLYRELHSLAERHLSHQG
                     SGFTLGATTLLHEAYLSIANRGDLKFPDRARFLGYASRAMRGLIVDYARRRQAKKRGG
                     EFHITRSEGLDAPDPRSMLTDLDELSEALDELGKIEPELAQLVDLHFFCGLTFGEIAA
                     LRGVSERTVQRDWRTARLLLHRTLKEPGATEE"
     gene            778..>1254
                     /locus_tag="VLD58_10115"
     CDS             778..>1254
                     /locus_tag="VLD58_10115"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSB54702.1"
                     /translation="MTAPLPTEPALTGAYGVAPPGYRLPKAAHVGTVRLQVANLSRSL
                     EWYTTVLGFAVLETRSGHAALGAAGSASPLVELAEHPGALPPPRRGRLGLFHYAILLP
                     DRAALGRFLARQIELGTPLGASDHLVSEALYLSDPDGLGIEVYRDRPRSEWQRHGNE"
BASE COUNT          187 a          423 c          435 g          209 t
ORIGIN      
        1 acatcgagac cggttcggtg ggtgcgagtc tgcttctaga acggattttc gcccccggaa
       61 ccgacacacc agccggaact tactcctcgg tcgcgccggg ctccttcagg gtgcggtgga
      121 ggagcaggcg ggcggtgcgc cagtcacgct ggacggtgcg ttcggagacg ccgcgcagtg
      181 ccgcgatttc gccgaaggtg aggccgcaga agaaatggag gtcgaccagc tgggccagct
      241 ccggctcgat ctttcccagc tcgtcgagcg cctcgctcag ctcgtcgaga tcggtgagca
      301 tgctgcgcgg gtcgggcgcg tcgagacctt cggagcgggt gatgtggaac tcgccgcccc
      361 gcttcttggc ctggcgccgg cgggcatagt cgacgatgag gccccgcatc gcccgcgagg
      421 catagccgag gaaccgggcc cggtcgggga acttgaggtc gccgcggttg gcgatgctga
      481 ggtaggcctc gtgcagcagg gtcgtggcgc cgagggtgaa ccccgagccc tggtggctca
      541 ggtgccgctc cgccagcgag tgcagctcgc ggtagagcat ggtgaacagc tcatccgcgg
      601 cgcggctgtc ggccccgtcg aagggagtcc cggattgtgc ctgcgaatca tgttccacgg
      661 tggccgaacg tgaaggtcct tgaacaatat ggacgcccgt gtcgttcgtg gccagcggaa
      721 ccacctgtcc cgcaccatga ctattatgcc cggtagacga cgttcgagga gccgctcatg
      781 actgcccccc tgccgaccga acccgcactc accggagcct atggtgtcgc gccgcccggc
      841 taccgcctgc ccaaggcagc gcatgtcggc acggtgcggc ttcaggttgc caacctgagc
      901 cgttcgctcg agtggtacac cacggtcctg ggcttcgcgg tgctcgagac ccggagcggc
      961 cacgccgcgc ttggcgcagc cgggtcggcg agcccgctgg tcgaactggc cgaacatccg
     1021 ggggccctgc caccgccgcg gcgcggacgg ctcggcctct ttcactatgc catcctgctc
     1081 cccgatcgcg cggccctggg ccggttcctt gcccgtcaga tcgagctcgg gacgccactc
     1141 ggcgcctccg atcatctggt cagcgaggcg ctctatctga gcgaccccga tgggctcggt
     1201 atcgaggtgt atcgcgaccg gccccgctcc gaatggcagc gccatggcaa cgag
//
LOCUS       DATIFF010000684         2070 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_548606, whole genome shotgun sequence.
ACCESSION   DATIFF010000684 DATIFF010000000
VERSION     DATIFF010000684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2070
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_548606"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..304)
                     /locus_tag="VLD58_10120"
     CDS             complement(<1..304)
                     /locus_tag="VLD58_10120"
                     /inference="COORDINATES: protein motif:HMM:NF012529.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA/Hda family protein"
                     /protein_id="HSB54703.1"
                     /translation="MSIRLNPRYRFDAYVVGAANRLAVTAARAVAESPAAVYNPLFVY
                     AGSGLGKTHLLMAMGHHALEVNPQLSVEYLMLDEFIEAFHAAIAVGQGEAYRRRYAD"
     gene            complement(301..906)
                     /locus_tag="VLD58_10125"
     CDS             complement(301..906)
                     /locus_tag="VLD58_10125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015347803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase domain-containing protein"
                     /protein_id="HSB54704.1"
                     /translation="MSLVNFTTREITCKIVYYGPGRSGKTTNLQYIYGRVPEARRGRM
                     VSLATQTDRTLFFDFLPLDLGVISGFTTRFQLYTVPGQVYYNATRKLVLQGADGVVFV
                     ADSQARRLEDNVESLQNLQANLLGQGVDVRSFPIVLQYNKQDLPADLILTPADLDDAL
                     NFRGYRSFAGDAVRGAGVFETLKGISEMVLKRLAASGAGVA"
     gene            complement(909..1373)
                     /locus_tag="VLD58_10130"
     CDS             complement(909..1373)
                     /locus_tag="VLD58_10130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54705.1"
                     /translation="MKAIEPWVLGPLGDFVNESQARLALLMTTSGQVVAQHGFAGSMD
                     LMASAALGSGIIASASELAVQIGWEPFRVVMHHGSRRAHFLAWFDTPRGRWIALVVFS
                     ADTKLGLVQVFFDRMVEELVAAAPAEAPPKKEVLAADFERELNASLRSLFGR"
     gene            complement(1373..1723)
                     /locus_tag="VLD58_10135"
     CDS             complement(1373..1723)
                     /locus_tag="VLD58_10135"
                     /inference="COORDINATES: protein motif:HMM:NF015232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HSB54706.1"
                     /translation="MSAPYLGMLDSLTRLRGIRGAMVVSMEDGLVVAESLMAGIKGAP
                     LAALSATLAGRVSELSGSAGCGGPRFLHLHGAEGALLVAPAHDDLLLVAVAGRDVPLG
                     LLRLEMLRMAERLS"
     gene            complement(1720..>2070)
                     /locus_tag="VLD58_10140"
     CDS             complement(1720..>2070)
                     /locus_tag="VLD58_10140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54707.1"
                     /translation="PFSGLEGAGERLLLVDQDGFRLGGSLLSSEGVDVSEASAAVLAG
                     TSREASRAARMLELGEWGHLTIEATGVSLCVLRPTADTTLLSTMDAGLPPGQLSFFAE
                     RAAKAARLWLERIR"
BASE COUNT          347 a          741 c          690 g          292 t
ORIGIN      
        1 catcggcgta gcggcggcga taggcctcgc cctgcccgac cgcgatggcg gcgtggaatg
       61 cctcgatgaa ctcatcgagc atgagatact cgaccgagag ctgggggttc acctccagcg
      121 catggtgccc catcgccatc agcaggtggg tcttgcccag ccccgacccg gcatacacga
      181 agagcgggtt gtagaccgca gccggcgact ccgccaccgc gcgtgccgcg gtgacagcga
      241 gccggttggc ggcgcccacg acataggcgt cgaaccggta gcgggggttg agccggatgc
      301 tcacgccact cccgcgccgg aggcggccag ccgcttgagc accatctccg aaatgccctt
      361 gagggtctcg aagacccccg cgccccgcac cgcgtcgccg gcaaagctcc ggtagccgcg
      421 gaaattgagc gcatcgtcca gatcggccgg ggtgagaatc aggtcggcgg gcaggtcctg
      481 cttgttgtac tggagcacga tgggaaagct gcggacatcg accccctgtc ccagcagatt
      541 ggcctggaga ttctggagac tctccacgtt gtcttccagc cgccgggcct ggctgtcggc
      601 cacgaagacc acgccgtcgg cgccctggag caccagtttg cgggtggcgt tgtagtagac
      661 ctggcccggc accgtgtaga gctggaaccg ggtggtgaac ccgctgatca cgccgagatc
      721 gagcggcagg aagtcgaaga agagggtccg gtcggtctgg gtcgccagac tgaccatccg
      781 tccgcggcgc gcctcgggga ctcggccgta gatgtactgc aggttcgtgg tctttccgga
      841 ccggcccggt ccgtagtaca cgatcttgca ggtgatctcg cgggtcgtga agttgacgag
      901 ggacatggct atcgtccgaa gagggaccgc agactggcgt tgagttcgcg ttcgaaatcc
      961 gcggccagga cctccttctt gggtggcgcc tcggccggcg cggccgccac cagttcctcc
     1021 accatccgat cgaagaagac ctgcaccagc cccagcttgg tgtcggcgct gaacaccacc
     1081 agcgcgatcc agcggccccg cggcgtgtcg aaccaggcca ggaaatgcgc ccgtcgcgag
     1141 ccgtgatgca tcaccacccg gaacggctcc cacccgatct ggaccgccag ctcgctggcc
     1201 gaggcgatga tgcccgaccc gagcgcggcc gacgccatca ggtccatcga gccggcgaat
     1261 ccgtgctgcg ccaccacctg ccctgacgtc gtcatcagga gcgcgaggcg cgcctgcgac
     1321 tcgttcacga agtcgcccag cggaccgagc acccacggtt cgatggcctt catcagctca
     1381 gccgctcggc catgcggagc atctcgagcc ggagcaggcc gagcggcacg tcccgccccg
     1441 ccaccgccac cagcagcaga tcgtcgtgcg ccggcgccac cagcagcgcg ccctcggcgc
     1501 catggagatg caggaaccgg ggcccgccgc agcccgccga cccgctcaac tccgacaccc
     1561 gtcccgcgag ggtggccgag agcgccgcga gcggcgcgcc tttgattccc gccatcagtg
     1621 actcggccac caccagcccg tcttccatcg acacgaccat ggccccgcgg atgccgcgga
     1681 gccgggtgag cgagtcgagc atgccgagat agggggcgct caccggatcc gctccagcca
     1741 gagccgcgcc gccttggcgg cccgctcggc gaagaaggag agctgtcccg gtggcaatcc
     1801 cgcatccatc gtcgagagca gcgtggtatc ggcggtgggc cggaggacgc agaggctgac
     1861 cccggtcgct tcgatggtga ggtggcccca ctcgcccagc tccagcatcc gcgcggcccg
     1921 gctggcttca cgcgaggtac cggccaggac cgcggcactg gcttcactca cgtcgacgcc
     1981 ctcgctcgac aggagcgaac cgcccagccg gaacccgtcc tggtcgacca gcagcagccg
     2041 ttcgcccgcg ccctcgaggc ccgagaaggg
//
LOCUS       DATIFF010000685         2069 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_855484, whole genome shotgun sequence.
ACCESSION   DATIFF010000685 DATIFF010000000
VERSION     DATIFF010000685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_855484"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1447)
                     /locus_tag="VLD58_10145"
     CDS             complement(<1..1447)
                     /locus_tag="VLD58_10145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase/succinate dehydrogenase
                     flavoprotein subunit"
                     /protein_id="HSB54708.1"
                     /translation="MTLNARIPSGPIQEKWDRHRFELKLVNPANKRKYTVLVVGSGLA
                     GGSAAASLSELGYNVKCFCFQDSPRRAHSIAAQGGINAAKNYPNDGDSIWRLFYDTVK
                     GGDFRAREANVYRLAQISVNIIDQCVAQGVPFAREYGGLLANRSFGGAQVSRTFYARG
                     QTGQQLLLGAYQALAKEIAKGGVTMFPRTEMLDLIVIGGRAQGIVVRDMVTGRISSHL
                     GDAVVLGTGGYGNVFYLSTNAKGSNATAIWRAHKRGALFANPCYTQIHPTCIPVSGDY
                     QSKLTLMSESLRNDGRVWVPKRKGDTRRPGEVPESERDYYLERKYPSFGNLAPRDIAS
                     RAAKEVCDEGRGVGPGGLGVYLDFADAIRRLGEDTIRERYGNLFEMYQRITDENPYRA
                     PMRIYPAVHYTMGGLWVDYDLQSTVPGLFVIGEANFSDHGANRLGASALMQGLADGYF
                     ILPMTIGDYLAGVRPDAAGESHSEIAGTEAAV"
     gene            complement(1475..>2069)
                     /locus_tag="VLD58_10150"
     CDS             complement(1475..>2069)
                     /locus_tag="VLD58_10150"
                     /inference="COORDINATES: protein motif:HMM:TIGR02046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="succinate dehydrogenase cytochrome b subunit"
                     /protein_id="HSB54709.1"
                     /translation="GIAYIILHMVGNLQVFQGAERLNGYAALLHGPLNELLWIARIVL
                     IAAVVLHVLAAWQLTRRDRAARPVEYRRREPQVSTLASRTMRWGGVLLLVFIVVHILH
                     FTTGTIRPAGAFVPGDVYANVTGSFRIWWVTLFYVVAMVALGLHLYHGAWSSVRTLGA
                     ERPARNLRLRPVAIAVALVVAVGFALVPVAVALGWVR"
BASE COUNT          328 a          723 c          699 g          319 t
ORIGIN      
        1 tgaccgccgc ctcggtcccg gcgatctccg agtggctctc gcccgccgca tcggggcgga
       61 ctcccgccag gtagtcgccg atggtcatgg gaaggatgaa gtagccgtcg gccaggccct
      121 gcatcagcgc gctcgcgccc agccggttgg cgccgtggtc ggagaagttc gcctcgccga
      181 tgacgaagag ccccggcacc gtgctctgga ggtcgtagtc tacccagagc ccgcccatgg
      241 tgtaatggac cgccgggtag atccgcatcg gcgcccggta cggattttcg tccgtgatcc
      301 gctggtacat ctcgaagagg ttgccgtagc gctcccggat cgtatcctcg cccaggcgcc
      361 ggatggcgtc ggcaaagtcg agatacacgc ccagcccacc cgggccgacg ccccgcccct
      421 cgtcgcacac ctccttggcc gcgcgggacg cgatgtcgcg cggggccagg ttgccgaagc
      481 tgggatattt ccgctcgagg tagtagtccc gctcgctctc ggggacctcg ccgggccgcc
      541 gggtgtcgcc cttccgcttc gggacccaga cccggccgtc attgcgcagg gactcgctca
      601 tcagggtgag cttggactgg tagtcgccgc ttaccgggat gcaggtcggg tggatctggg
      661 tgtagcacgg gttggcgaag agcgccccgc gcttgtgcgc gcgccagatg gcggtcgcgt
      721 tggaaccctt cgcgttggtg gagaggtaga agacgttgcc gtagccgccg gtgccgagca
      781 ccaccgcgtc gcccaggtgg gaggagatcc ggcccgtcac catgtcgcgc accacgatgc
      841 cctgcgcgcg cccgccgatc acgatcaggt caagcatctc ggtgcgcgga aacatcgtga
      901 cgccgccctt cgcgatctcc ttcgccaggg cctggtaggc gccgagcagg agctgctgcc
      961 cagtctgtcc ccgggcgtaa aaggtacgcg acacctgcgc cccgccgaac gaccggttgg
     1021 ccaggagccc gccgtactcc cgggcgaagg gcacgccctg cgcgacgcac tggtcgatga
     1081 tgttgacgct gatctgggcg agccggtaga cgttggcctc gcgcgcgcga aagtccccgc
     1141 ccttcaccgt gtcgtagaac aggcgccaga tgctgtcgcc gtcgttgggg tagttcttgg
     1201 ccgcgttgat gccgccctgc gcggcgatcg agtgcgcccg ccgcggagaa tcctggaagc
     1261 agaagcactt cacgttgtaa cccagctcgc tcagcgacgc cgcggcgctg ccgcccgcga
     1321 gcccgctccc gaccaccagc accgtgtact tccgcttgtt ggcggggttc acgagcttga
     1381 gctcgaagcg gtgccgatcc cacttctcct ggattggacc ggagggaatc cgagcgttca
     1441 gggtcatcaa gggctcccgg tcacttctca ctccctacct tacccatccc agcgccaccg
     1501 ccaccggcac cagcgcgaac cccacggcca ccaccagcgc caccgcgatc gccaccggcc
     1561 ggagccgcag gttccttgcc gggcgctccg cgccgagcgt gcggaccgag ctccaggctc
     1621 catggtagag gtggagccca agggcgacca tcgcgacgac gtaaaagagc gtcacccacc
     1681 agatgcggaa gctgccagtc acgttggcgt acacgtcgcc cgggacgaat gcgccggcgg
     1741 gacggatggt gccggtggtg aagtggagga tgtgcacgac gatgaacacc agcagcagga
     1801 cgccacccca gcgcatagtc cgggaggcga gcgtggagac ctgcggctct cggcgccggt
     1861 actccaccgg ccgggcggcg cggtcccgcc gagtgagctg ccaggccgcc aggacgtgca
     1921 gcacgacagc cgcgatcagc acaatgcgcg cgatccacag cagctcgttg agcggcccgt
     1981 gcagcagcgc ggcgtagccg ttgagccgct ccgcgccctg gaacacctgc aggttgccga
     2041 ccatgtggag gatgatgtag gcgatcccg
//
LOCUS       DATIFF010000686         2892 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_855750, whole genome shotgun sequence.
ACCESSION   DATIFF010000686 DATIFF010000000
VERSION     DATIFF010000686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2892
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_855750"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2592)
                     /locus_tag="VLD58_10155"
     CDS             complement(<1..2592)
                     /locus_tag="VLD58_10155"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB54710.1"
                     /translation="MSLIPGLFDRLKALLRRDQLDRDTADEIQHHLAMEAAQNRELGM
                     RTTDAERKARLDFGSIEAIREAERDARGSRWVHDFLGDVRYSVRSLRRSPVLAGAAIL
                     TLALGIGANTAIFSAVNAVILRPLPFADPGRLYMVWEQNPEKGWYKNIAAPANYLDWK
                     EQVAAFKDVGAWADWQSSVTLVGEGRPIRLKSGLVTGNMFSVLGVDPLVGRSFTWEET
                     WKTGTPVTVLSERLWRTHFNADPAIVGKTLDLDGVATQVVGVMPKAAGAFPREGMDLW
                     APMGWDPESRSKVGFRRAHWLRVAARLQPGVSATEADAQLQTTVKLLQQDYPATNRVM
                     GAGMTPLHEFLIGDTRGPLLLLLASVGVLLLIACGNVGNLLLVRAAGMEREVALRLAL
                     GAGRNRVVRQALTESLVLSVLGAVVGLVVGWAGIRVLVLLEPPKLLPTGNVTLSWPVL
                     GYILLITLACAALFGAAPAAWGARRAPVDALKEGGKSGSGSHRVRRWSDLLVVGEVAL
                     ALLLTIGACLVLRSYWRLNSVDPGFDGDGVLSTLVVLPGSRYDGQAKVTAFFEDLVTQ
                     ARSLPGVISASGTTSQPLTGVRWTSDFTAQGWAPDQVGFEVGHREVMPDYYRMLGVPL
                     VKGRAFTDADRAGAPKVVIINQTLATRYFPNEDPIGKLITFDKVPDSTSIWRTIVGVA
                     QDGGSGLYLLLKTRGNPAALGPSVRDLVERLDPTLAIVSTTTLSEERGRSLARQRFML
                     TLMGAFSVTGMLLAVIGVYGVMAQLARGRVREMGIRIALGAQAGSVQWLVVRHGLRLV
                     GAGLVLGLAGAVVLSRSISALLFQVEPLDPVTFVTVPLLLVVSGLAACWLPAFRVSRA
                     SPALALRT"
     gene            complement(2708..>2892)
                     /locus_tag="VLD58_10160"
     CDS             complement(2708..>2892)
                     /locus_tag="VLD58_10160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSB54711.1"
                     /translation="YPALRRLEVKGWLAGEWRASDANRRARYYKLTAAGRKALGTEAE
                     GWRQYVQAVGWILETV"
BASE COUNT          491 a          987 c         1009 g          405 t
ORIGIN      
        1 cgttcgcagc gccagcgccg gactcgcccg gcttacccgg aatgcaggga gccagcacgc
       61 ggccaggccg ctcacgacaa gcaacagtgg aacggtcaca aatgtgacgg gatcgagcgg
      121 ctcgacctgg aacaggagcg ccgagatgct ccgactcagg accacggccc cggcgagccc
      181 caggacgaga cccgctccca ccagccggag cccgtggcgg accaccagcc actgcaccga
      241 ccctgcctgt gcgccgagcg cgatgcgaat ccccatctcg cgcacccgcc cccgtgccag
      301 ctgggccatc acgccgtaga cgccgatcac cgccagcagc atccccgtca ccgagaaggc
      361 gcccatcagc gtcagcatga accgctgccg cgcgagcgag cggccccgct cttctgacag
      421 cgtggtggtc gagacgatgg ccaacgtagg atcgagccgc tcgaccaggt cgcgcaccga
      481 gggacccagc gctgcggggt tgccgcgagt cttgaggagc agatacaggc ccgacccacc
      541 atcctgcgcc acgccgacga tggtgcgcca gatggaggtc gagtcgggca ccttgtcgaa
      601 cgtgatcagc ttgccgatgg gatcctcgtt cgggaagtag cgagtggcga gggtctggtt
      661 gatgatcacg accttcgggg cccccgcgcg gtcggcgtcg gtaaaggccc tgcccttcac
      721 caacggaacg ccgagcatcc ggtagtagtc aggcatgact tcgcgatggc ccacctcgaa
      781 gcccacctgg tcgggcgccc agccctgggc cgtgaagtca ctggtccagc gcacgcctgt
      841 gagcggctgg ctggtggtcc cggaggcgct gatgacgccc ggcagcgagc gggcttgcgt
      901 caccaggtct tcgaagaagg cggtgacctt ggcctggccg tcgtagcgcg agccggggag
      961 caccacgagg gtcgagagca ccccgtcccc atcgaagccc gggtcgaccg agttgaggcg
     1021 ccagtagctc cggagcacca ggcaggcgcc gatggtgaga aggagcgcca gggctacctc
     1081 gcccaccacc agcaggtcgc tccagcgacg cacccggtga ctcccgctcc cgctcttccc
     1141 cccttccttg agcgcatcga ccggcgctcg gcgggcgccc cacgcggccg gggcggcgcc
     1201 gaacagcgcg gcgcaggcca gcgtgatcag caggatgtag cccagcaccg gccagctgag
     1261 cgtgacgttg ccggtgggga gcagtttggg tggctcgagc agcaccagca cccggatacc
     1321 ggcccagcca accactagcc ccactaccgc tcccagaacc gacagcacca ggctctccgt
     1381 aagcgcctgt cgcacaaccc ggttccgccc agcaccgagc gcgaggcgga gtgcgacctc
     1441 ccgctccatg ccggcggccc ggacgaggag cagattgccg acgttgccgc aggcgatgag
     1501 gagaaggaca cccaccgatg ccagaagcag gagcaacggg ccgcgggtgt cgccgatcag
     1561 gaactcgtgg agcggcgtca tgccggcgcc catgacccgg ttggtggccg gatagtcctg
     1621 ctgcagcagc ttgaccgtgg tctggagctg ggcatcggcc tcggtggccg agactcccgg
     1681 ctggaggcgg gcagcaaccc gaagccaatg tgcccggcgg aagccgacct tgctgcgcga
     1741 ttcaggatcc cagcccatcg gcgcccagag gtccatgcct tcgcggggaa acgcgccggc
     1801 cgccttgggc atgacgccga caacctgagt ggcgaccccg tcgaggtcga gcgtcttgcc
     1861 gacgatggcg ggatcggcgt tgaagtgggt tcgccagagg cgttcgctga ggaccgtgac
     1921 cggcgtaccg gtcttccagg tctcctccca cgtgaagctg cgaccgacca gggggtcgac
     1981 cccaagcacc gagaacatgt tgccggtgac gaggccgctc ttgagccgga tgggccggcc
     2041 ctcgccgacg agcgtgaccg acgactgcca gtcggcccag gcgcccacgt ccttgaacgc
     2101 ggcgacctgc tccttccagt cgagatagtt ggccggggcc gcgatgttct tgtaccaccc
     2161 cttttcgggg ttctgctccc agaccatgta gaggcgaccg ggatcggcga aggggagcgg
     2221 acggaggatg accgcgttca ccgccgagaa gatcgcggtg ttggcgccga tgccgagggc
     2281 gagggtgagg atggcagcgc cggcgagcac cgggctccgg cggagcgagc ggaccgagta
     2341 gcgcacgtcg cccaggaaat cgtgaaccca gcggctcccc cgggcatcgc gctcggcctc
     2401 acggatggcc tcgatgctgc cgaaatcgag ccgggccttt cgctcggcgt cggtggttcg
     2461 catgccgagc tcccggttct gggcggcttc catggcgagg tgatgctgaa tctcgtcggc
     2521 ggtgtcgcgg tcgagctggt cgcggcgaag cagcgccttg aggcggtcga agagaccggg
     2581 gatcagcgac atgggcagct cctctggtta ggcggcaaag cggcaaggcg gcaaagcggt
     2641 cagttgggcg gctaggcggc taggcggcta ggcggctagg cggctaggcg gctaggccga
     2701 cgttgcgcta gacagtctcc aggatccagc caacggcctg gacatactgc cgccatcctt
     2761 cggcctcggt tcccaaagcc ttgcgtccgg cggcggtgag cttgtagtag cgggctctcc
     2821 ggttggcgtc cgacgcgcgc cattcgcctg ccagccaccc tttcacctcg aggcggcgga
     2881 gcgcgggata ga
//
LOCUS       DATIFF010000687         7051 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2088112, whole genome shotgun sequence.
ACCESSION   DATIFF010000687 DATIFF010000000
VERSION     DATIFF010000687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7051
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2088112"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1233)
                     /locus_tag="VLD58_10165"
     CDS             complement(<1..1233)
                     /locus_tag="VLD58_10165"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HSB54712.1"
                     /translation="MTAIQDGPSVMSQEEQENELVDRASHGAKLLTARGVGMRIISVL
                     SNLALFALVTPADLGLLAVVRGLTALAGNTTDLGFAWALLRRPEMPSREEYASLAGIQ
                     LSMVLGLLVVAVAEPGWLARVAAVTPEWRWWLLAVLATTVTVPFGTSAKIRIERKLDY
                     RKIAFYDMSSVLLLNLSLLAFAAAGKFELGVFLSTGGVILYSNLLLWFWSPGPLPAFR
                     PSRWKSLAGEFAGFSAGHGCYLLFTSATPIVVANLFGLSVAGLWSFAVRLGNILQVAF
                     EGFRRAAVPAAALLSRSEQGLRRLVEDSLLGAARLSIPVVAAMFAALPAVPILWPKWT
                     AAVPVGQLYILGFGLGGLASASLVPAAVARRGAKVVVVEQLTPMLVGWAGFGLLWLVG
                     QAEIGWVILPMYLVQAVAL"
     gene            complement(1230..2393)
                     /locus_tag="VLD58_10170"
     CDS             complement(1230..2393)
                     /locus_tag="VLD58_10170"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSB54713.1"
                     /translation="MTTRVALVCSGLGTVRRGYEAFAQGLFDALSGVEGLDVWLFKGA
                     GARTPREIPLWHLPRSGFPARLTGELTRRGPYVMEQATLTVSLIPWLRKTRPDVVYYC
                     DPSIGRLLWQWRKLTGPQFRLIMHNGGPHPPPFRWADHVHQLTPVTLTEALSAGVPPE
                     RQTLLPCGFSFGPPPQPMSMYERSTRRRALGLPVDRPLVLSVGALNRGHKRMDYLITE
                     IASMGEARPFLVMLGESEDDTPAVRALAELLLGPEGFQMRTVPRERMDEYYRAADVFA
                     LASLTEAFGLAYVEALAHGLPTIAHDQEVTRFVMGKEGTLADLRRPDALAAAVRTVLQ
                     EGDRGADRERRHEVMRARFGWPALLPGYVTMLAPSDRAQAPAPRAPVAAGVAG"
     gene            complement(2390..4846)
                     /locus_tag="VLD58_10175"
     CDS             complement(2390..4846)
                     /locus_tag="VLD58_10175"
                     /EC_number="2.7.10.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045226 - extracellular polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis tyrosine autokinase"
                     /protein_id="HSB54714.1"
                     /translation="MPRGRPNEEEVVSFGLVAGMARRRWLLILLCVVVSIGVAMSYLM
                     LTPPSYESGASLLVEGEQYDLPEVTKRLNDQSDVNTQLEVLKSATLAERVVRDLALRV
                     TVKAYAGPSLVVANSAVGKLLPSIPQPVARSHLLSAVAVSDSADTTTVTLQRLSTGAF
                     QVTDSRNPRVADTVAVGKKASVSGVAFTLAPGAADFSRIKLFVGDLPGALDGLRQDVR
                     LSRADRDVDVLWIRYRTPDPLLASQVPNLWAQHYLDMKVGAAKAKISNAIGFLRGQAD
                     TLQSQLMASEEALRDYRQKQGIVDLNAEALSQVEQGAQVDTKRMLLEAERTALRRLVS
                     DADTANKGSSAPSPYRRLAGFPTLIANQTVSDQLHTLSELEQQRSEMLERRTAQDPDV
                     MALSRRINDVDAQLRGLTNAYLEGLNNQLSSLEGSIRTNQGRMARIPAKAMNEDRLSR
                     KPKLLGDVYSMVQTRLQEARIAESAADPGVRLVDRAEIPTLPVWPRANLILLVAIAVG
                     VMAGGTFAWLREGMDGSVHSRADVIRAANLPLLGLIPRIRMLRPKKMKRGDPIGILTA
                     TPRGFGSRARRSDHSGRALLLGGKDKSGAALEAYAWLETSLALTRPNDAPRTVAFTSP
                     LSREGKTINAANLALSVARRGRKVLLIDADLRRGMIHHLFGISQDRGLADVLARQVTL
                     EQAIRVLPLGEGTEVHVMPCGQSEAHPAAALRSDDMKQLLHHMSSRYDLILVDSPPVN
                     LVSDPLVIATMVDGVILVARAGVTESDALAEASQHLREAGAPVLGVLLNDIDLKRDSS
                     YDEAYRYLDEAGDYSRAVPA"
     gene            complement(4911..5600)
                     /locus_tag="VLD58_10180"
     CDS             complement(4911..5600)
                     /locus_tag="VLD58_10180"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HSB54715.1"
                     /translation="MGDFIMRLRLTGMAVTGALLFAGPAMAQSTATTTDTTAPAPPVV
                     AMAGVQVDTASLRPGDVLRLKIWREPDLSGDFTVDERGQAVLPRLGATQVSGTPADQL
                     KQRLTDEYRKYLNNPSIEVIPLRRISILGAVRNPGMYPVDPSITLGEAPNVAGGAMPE
                     SRRNMLELRRNGLTRQVDLRKEPRLAALPLSSGDQVYIPEKSWFSKNATWVIGTAIGV
                     AGTTALILTRP"
     gene            complement(5604..>7051)
                     /locus_tag="VLD58_10185"
     CDS             complement(5604..>7051)
                     /locus_tag="VLD58_10185"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HSB54716.1"
                     /translation="PAAEYAEAAIDLSERRRAGGTTRLSVTSRAPELRRLHLARDAAR
                     VAVLIGADVTSLLLLWVALHATTGVPGETSAGPYVPAVVLGLALFGCYNSGDKRRQVD
                     SLVKASGLGAVITLWAVNVGSPARWVTAVAALWTATAIALLLERRIVDLLVRAARPRD
                     KQVMRAAVVGATESAARLIDHPAFADIQWCRLDAFLDPGRVPGDFAAALARLIRDREI
                     DTVILTGNLPNHVFELALDVAGASGCRVFSLPRVPPSTTCLPEVSWRNGFPVVELTRP
                     SVMGTQLLVKRATDLVLSSLALLALAPVMLVVAILVKRSSPGPVFFRQVRIGLGGRRF
                     TIFKFRTMVQGADQQREALLAQSVYSDARLFKVVNDPRVTPLGAFLRRTSLDELPQLF
                     NVLRGDMSLVGPRPPLPSEVELYQAHHYSRFDVKPGITGPWQVSGRNSIHDFDTVIRL
                     ESTYIRRWSLWLDLELLCRTVPVVLSGRGAH"
BASE COUNT         1150 a         2442 c         2442 g         1017 t
ORIGIN      
        1 gagagccact gcctgcacca ggtacatcgg gaggattacc cagccgatct ctgcctgccc
       61 gaccagccag agcagtccga agccagccca ccccaccagc atcggggtga gctgctccac
      121 cacgaccacc ttcgcccctc gtctggccac ggccgccggc accaggctcg ccgaggccag
      181 tccaccgagt ccaaagccga ggatgtagag ctgacccacg gggaccgcgg cggtccactt
      241 aggccagagg atcggtaccg cgggcagggc cgcgaacatc gcggcgacca cgggaatcga
      301 gaggcgggcc gcgccgagca gcgaatcctc caccagccgg cggagcccct gctccgagcg
      361 gctgagcagc gccgcggccg gtactgccgc gcgccggaat ccctcgaatg ccacctggag
      421 gatgttcccg agcctcaccg cgaaggacca cagtccggcg accgacaacc cgaacaggtt
      481 cgcgaccacg atcggcgtgg ccgacgtgaa gagcaggtag cagccatgcc ccgcggagaa
      541 gccggcgaat tcacccgcca ggctcttcca ccgcgacggc cggaatgccg gcagcggtcc
      601 cggcgaccag aaccagagga ggaggtttga gtagaggatg acgccgcccg tcgagagaaa
      661 cacgcccagt tcgaacttcc cggccgcggc aaaggcgagg agcgacaggt tgaggagcag
      721 gaccgaggac atgtcgtaga acgcgatctt ccggtaatcc agcttgcgct cgatccggat
      781 cttggcgctg gtgccgaacg gcacggtcac cgtggtcgcc agtaccgcga ggagccacca
      841 gcgccattcc ggagtcaccg cggccaccct cgccagccat cccggctccg ccaccgccac
      901 gaccagaagc cccagcacca tcgagagctg aatcccggcg agcgaggcat actcctcgcg
      961 cgagggcatc tccggccggc ggagcaacgc ccacgcaaag ccgaggtcgg tcgtgttccc
     1021 cgccagggcc gtgagaccgc ggaccaccgc cagaaggccg aggtctgccg gggtgaccag
     1081 cgcgaacagc gccaggttgg agagcacgct gatgatccgc atgcccacgc cgcgggccgt
     1141 gagcagcttc gctccgtggg aggcgcggtc gaccagctca ttctcctgtt cctcctgact
     1201 catcacggag gggccgtcct ggatcgccgt catccggcga cccccgcggc caccggcgcc
     1261 ctcggcgccg gcgcctgggc ccggtctgac ggcgccagca tggtcacgta gcccggcaac
     1321 agtgccggcc acccgaaacg ggctcgcatc acctcatggc ggcgctcccg atcggcaccg
     1381 cgatctccct cctggagcac cgtccgcacg gcggcggcga gcgcgtccgg ccggcggaga
     1441 tcggcgaggg ttccctcctt ccccatcacg aaccgggtca cctcctggtc atgcgcaatc
     1501 gtgggaagcc cgtgcgccag cgcctcgacg taggccagac cgaacgcctc ggtcagtgag
     1561 gcgagcgcga agacatcggc ggcgcggtag tactcgtcca tgcgctcccg cgggacggtg
     1621 cgcatctgga agccctcggg cccgagcagc agctcggcca gcgcccgcac cgctggcgtg
     1681 tcgtcctcgc tttcgcccag catcaccagg aaagggcggg cctcgcccat cgacgcgatc
     1741 tcggtgatga ggtaatccat ccgcttgtgg ccccggttga gcgccccgac gctcagcacc
     1801 aggggccggt ccaccggcag ccccagcgcc cggcgccggg tgctccgctc gtacatcgac
     1861 atcggctgcg gcggcgggcc gaaggagaac ccgcagggga gcagcgtctg gcgttcgggc
     1921 ggaacgccgg cggagagcgc ctcggtgagc gtcaccgggg tgagctggtg cacgtgatcg
     1981 gcccagcgga acggcggcgg gtgcggcccg ccgttgtgca tgatcaggcg aaactgcggc
     2041 ccggtgagct tccgccactg ccacaggagc cggccgatgc tcgggtcgca gtagtagacc
     2101 acgtcgggcc gggtcttccg aagccaggga atcaggctga cggtgagggt cgcctgctcc
     2161 attacatagg gcccgcggcg ggtcagctcg cccgtgagcc gggcgggaaa ccccgagcgc
     2221 ggcagatgcc agagcgggat ctccctcggt gtcctggccc cggcgccctt gaaaagccag
     2281 acgtcgagcc cttcgacccc gctcaaggcg tcgaacaggc cctgggcaaa ggcctcgtag
     2341 cctcggcgta cggtgccgag accggagcag acgagcgcaa cccgcgtggt catgcgggaa
     2401 ccgcccggct gtaatctccc gcctcgtcga ggtagcgata cgcctcgtcg tagctggagt
     2461 cgcgcttgag atcgatatcg ttgagcagca caccgagcac cggtgctcct gcctctcgga
     2521 ggtgctgcga ggcttcggcc agcgcgtccg actcggtgac accggcccgc gcgaccagga
     2581 tcaccccatc gaccatcgtg gcgatgacca gcggatcgct gaccaggttc accggcggcg
     2641 agtcgaccag gatcaggtcg tatcgcgaac tcatgtggtg gagcagctgc ttcatgtcgt
     2701 ccgagcgcag cgccgcggcc ggatgcgcct cgctctgccc gcagggcatc acgtgcacct
     2761 cggtgccttc accgagcggc agcacccgga tcgcctgttc gagggtgacc tggcgggcga
     2821 gcacgtcggc cagcccgcga tcctggctga tgccgaagag gtggtggatc atcccgcgcc
     2881 ggagatcggc gtcgatgagg agaacctttc ggccccgccg cgccaccgag agcgcgagat
     2941 tggccgcatt gatggtcttc ccttcccgcg agagggggct ggtgaaggcc acggtgcggg
     3001 gcgcatcgtt gggacgggtg agcgcgaggc tggtctcgag ccaggcgtaa gcctccaggg
     3061 cagcgccgct cttgtccttg ccgcccagca gcagggcccg gcccgagtga tcgctccggc
     3121 gtgcccggga gccgaagcct ctaggtgtcg cggtgaggat cccgatcggg tcgccccgct
     3181 tcatcttctt cgggcgcagc attctgatcc gtgggatcag accgaggagc ggaaggtttg
     3241 ccgcccggat cacgtcggcc cggctatgga ccgaaccgtc catcccttcg cggagccagg
     3301 caaaggttcc gcccgccatg acgccgaccg cgatcgctac cagcaggatc aggttggccc
     3361 gcggccagac cgggagtgtc ggaatctcgg cccggtcgac caggcgtaca ccaggatcgg
     3421 cggcgctctc ggcgatgcgg gcctcctgga gccgggtctg gaccatggag tacacgtcac
     3481 ccaggagctt gggcttccgg gagagacgat cctcattcat ggccttggcc gggattcgcg
     3541 ccatccgtcc ctggttggtg cggatggacc cctcgagcga gctcaactgg ttgttgaggc
     3601 cctcgaggta ggcattggtg agcccgcgca gctgggcatc gacgtcgttg atgcggcggc
     3661 tcagggccat cacgtccggg tcctgggccg tgcgccgttc cagcatctcg gagcgctgct
     3721 gctccagctc gctcagcgtg tgcagctggt ccgacacggt ctggttcgcg atgagcgtcg
     3781 ggaagccggc cagccgccgg tagggcgacg gcgcactgct ccccttgttc gcggtgtcgg
     3841 cgtccgacac cagccgccgg agcgcggtgc gttccgcctc cagcagcatg cgcttggtgt
     3901 cgacctgggc cccctgctcc acctggctca gggcctcggc gttgagatcg acgatcccct
     3961 gcttctggcg gtagtcccgc aacgcctcct ccgacgccat caactgggac tggagggtgt
     4021 cggcctggcc gcggaggaag ccgatggcgt tggagatctt cgccttcgcg gcccccactt
     4081 tcatgtcgag atagtgctgg gcccagagat tggggacctg gctcgcgagc agcgggtcgg
     4141 gggtgcgata tcggatccac agcacgtcga cgtcgcggtc ggcccgcgaa agccgcacat
     4201 cctgccggag cccgtccagg gcgccgggca ggtcaccgac gaagagcttg atccgggaga
     4261 aatccgccgc accgggcgca agggtgaagg cgacgccact cacgctcgcc ttcttcccga
     4321 cggcgacggt atcggccacc cgcggattcc ggctgtcggt aacctgaaag gccccggtcg
     4381 agaggcgctg caatgtcacc gtggtggtgt cggcgctgtc gctcaccgcc actgccgaga
     4441 gcaggtgcga gcgggccacc ggctggggaa tgctgggcag gagcttgccc accgcgctgt
     4501 tggccaccac cagcgacggg ccggcgtacg ccttgaccgt gactcgcagt gcgagatccc
     4561 ggaccacccg ctcggcaagc gtggcgctct tgagcacctc gagctgggtg ttgacatcgc
     4621 tctggtcatt gagccgcttg gtcacctcgg gaaggtcata ctgctcccct tccaccagca
     4681 gcgacgcgcc cgactcgtag ctgggtggcg tcagcatcag gtaggacatg gctacgccga
     4741 tgctcaccac tacgcacagg aggatgagca gccatcggcg ccgggccatt cccgcgacca
     4801 ggccgaagga gacaacttcc tcctcgttcg gccggccacg gggcacgggg ggctgggtgt
     4861 gaacggttgc aacgcgcgcg ctggtcatga ctcttctccg tgtcctgtgc ttaggggcgc
     4921 gtgagaatca gcgccgtcgt ccctgccaca ccaatcgcgg tgccgatcac ccaggtggcg
     4981 ttcttgctga accagctctt ctccgggatg tagacctggt caccggagga cagcggcagc
     5041 gcagccaggc gcggctcctt ccggagatcg acctggcggg tcagcccgtt tcgccggagc
     5101 tcgagcatgt tgcgacggct ctcgggcatc gcgccgcccg ccacgttggg cgcctcgccc
     5161 agcgtgatcg agggatccac cgggtacatg ccggggttcc ggaccgcgcc gaggatcgag
     5221 atccgacgga gcgggatgac ctcgatcgag ggattgttga ggtacttccg gtactcgtcc
     5281 gtgagccgct gcttgagctg atcggcgggc gtccccgaca cctgggtcgc gcccagccgc
     5341 ggcagcaccg cctgtccccg ctcatccacc gtgaagtcgc ccgagagatc gggttcccgc
     5401 cagatcttga gccggagcac gtcgcccggg cggagcgaag ccgtgtccac ctggaccccg
     5461 gccatggcca ccaccggagg cgccggggcc gtcgtatcgg tggtggtggc cgtcgactgg
     5521 gccatggccg gcccagcgaa cagcaatgcg ccggtgactg ccatcccagt gagtctcaac
     5581 cgcatgatga agtctcccat tggtcaatga gcgccccggc ccgagagcac gacgggcaca
     5641 gtccggcaga gcagttcgag gtcgagccag aggctccagc gccggatgta ggtcgattcc
     5701 agccggatca cggtgtcgaa gtcgtgaatc gaattgcggc cgctgacctg ccaggggccg
     5761 gtgattcccg gcttcacgtc gaagcgggag tagtggtggg cctggtagag ctcgacctcg
     5821 ctgggcagcg gcgggcgcgg cccgaccagc gacatgtcgc cccgcagcac gttgaagagc
     5881 tgcggcagtt cgtcgaggct ggtgcggcgg aggaaggcgc ccagcggcgt cacccgcggg
     5941 tcgttgacca ccttgaagag ccgggcgtcg ctgtagacac tctgcgccag cagcgcctcg
     6001 cgctgctggt cggcgccctg caccatcgtg cggaacttga agatcgtgaa gcggcgtcca
     6061 cccagaccga tgcggacctg ccggaagaag accgggcccg gcgagcttcg cttcaccagg
     6121 atcgcgacca cgagcatcac cggcgccagc gcgaggagcg ccagcgacga gagcaccagg
     6181 tcagtcgccc gcttcaccag cagctgggtg cccatgacgc tgggccgggt gagttcgacc
     6241 accgggaagc cgttccgcca ggacacctcg gggagacagg tcgtgctggg aggcacccgc
     6301 ggcagcgaga agacccggca gcccgacgcc cccgctacgt cgagcgccag ctcgaagacg
     6361 tggttgggaa gattgcccgt caggatcacg gtatcgatct cacgatcgcg aatcagccgg
     6421 gcgagcgccg cggcgaaatc tcccggcacc cgcccgggat cgagaaaggc gtcgagccgg
     6481 caccactgga tgtcggcaaa ggcgggatga tcgatcaggc gggcggcgct ctcggtcgcg
     6541 ccgacgacgg cggcgcgcat cacctgcttg tcccgtgggc gggcggcgcg aaccagcagg
     6601 tcaacgatcc gccgctcgag gagcagggcg atggctgtcg cggtccagag cgccgccacc
     6661 gccgtgaccc accgggccgg gctccccaca ttgacggccc acagggtgat gaccgcgccg
     6721 agccccgacg ccttgaccag gctgtcgact tgccgccgtt tgtcaccgga gttgtagcac
     6781 ccgaagaggg cgagccccag aacgaccgcc ggcacgtagg ggccggccga cgtttcgccc
     6841 gggacgccgg tggtggcgtg gagcgccacc cagagaagca ggagggaggt gacatccgcg
     6901 ccgatgagaa ccgccacccg cgcggcatcc ctcgcgaggt ggagccgccg cagctcgggc
     6961 gcccgcgacg tgaccgacag gcgggtggtg ccacccgccc ggcgccgctc ggacagatcg
     7021 atggctgcct cggcgtattc cgcggcaggc t
//
LOCUS       DATIFF010000688         6730 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_243113, whole genome shotgun sequence.
ACCESSION   DATIFF010000688 DATIFF010000000
VERSION     DATIFF010000688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6730
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_243113"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(17..928)
                     /locus_tag="VLD58_10190"
     CDS             complement(17..928)
                     /locus_tag="VLD58_10190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54717.1"
                     /translation="MAVRVKHYTTTLPHGRAASRLTVASVVSVSLHLVLLFLLIRAAL
                     ESQRHPVQTASQATERPIQLDFAPPRPKPTPRPSAPQVPAATPQPTPPAVPLTPGPDE
                     TPGSRARVTPTPEERPNAAPDLARSQATRPDPGEENDPAGSSVTTTPPAAIAAPAPLA
                     NNSATLESEAKRLFGRPSSKLGPVSGTRDNRPWESPVELSHGCSVPEEQTDSTVPKGM
                     AVVEGRIFKEGTSEPLAGARLQILGTQYGTFSNGRGEYRLVFDRTLVDRCRTQSVRVS
                     APGYGQRDVILSIGERISSDVWLPRGY"
     gene            complement(1018..1410)
                     /locus_tag="VLD58_10195"
     CDS             complement(1018..1410)
                     /locus_tag="VLD58_10195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54718.1"
                     /translation="MTSPPPFRRSGENAAIRGWATGSPGVADVLRRGAWYPVLEMDDD
                     SVLIEVDHMPMRFQKEELRLRDDRPSMWSVVTRTGVMRPTLAGPKMVTSYAVCPDCTG
                     RQEFEGQPETLMCVRCRRAARVDWTTRY"
     gene            1501..3396
                     /locus_tag="VLD58_10200"
     CDS             1501..3396
                     /locus_tag="VLD58_10200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54719.1"
                     /translation="MSSATPLPRTTGTRMLADMLLALAGVMQQLRLGTEGHPALAASL
                     AGLERHLEGLLLERSSLSIEIGGVQLLVEGMETNASFEPLRDLAIQFREAGVGGLTIL
                     PGITALELQRVLSSIARPDPNVAWPATPHISLRALRPSGQHIADPWLALERRAFEDNR
                     PRATRDPAEIAVGLELHPASIQFDARMVELLAQIALRAVGDADEAATLDALVLILDAG
                     TLRRLLGPAGPTRAAREFLLAAAPLLSPATLLRLCQALATGRAGTISVGALRVLAKLS
                     DGAAPGSRSSRLVAEEFHRLVTQAYEQDTPHSPTRLAPEPDRVLKLALESGILEPGAE
                     LAADRMIARRQVGGLLALLDTVPREDPVARALRARLHHPRAVRVLLEATPPDLEALDR
                     LIPAAGLDAAPVLLDALAESREKRVRLRLIDLLGRYDQSIAPLLLERMEGMPWYVQRN
                     LLTLLGRLPDLPVDFSAEPLLQHRDPRVKHEAIVLALGDPGLRDRAIADALNSGYEPS
                     ERLALAALASGCPVELYPRVYTRVADPETSPELRALAISAVATVKDPVVLRLLRRMVI
                     ARGIPGLGRLAPRSPPMLAALRGLATHWANHPKVGPLLESARQSRDPEIREAARPHRR
                     STRMSQA"
     gene            3393..4493
                     /locus_tag="VLD58_10205"
     CDS             3393..4493
                     /locus_tag="VLD58_10205"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HSB54720.1"
                     /translation="MNTAPRFLNALQHALDLRVRPADATVRFTAEETLTSAARQLAEE
                     NPDAVFTFEASGIRFGPLPLAGFEAWPWTTTMVSRGIFRLQVAAPPEPAAVAAFLDLA
                     VGLIPPDAPVPQDALRWTSAEHRPQAPQDEYPLDEAVAVVRQLFVGAEKGEVLRRGDV
                     AAVVAALECVLAGEHGPALPLLHTGARERYQPAHALNTALLGMRVADALHLGPDERRE
                     CGVAALLHDIGMARLPVPAPDRFTSQDRARVRGHPLEGARLLLREGEIFEGAAIVSYE
                     HHLRQDGSGYPRLNYPREPHVLSRIVAVVDAFDALLAPRSDRPGLDPATALREVERSA
                     VTQFDPRIVAAFSEAVVQAAGHRQLSLTFRQV"
     gene            4533..5423
                     /locus_tag="VLD58_10210"
     CDS             4533..5423
                     /locus_tag="VLD58_10210"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HSB54721.1"
                     /translation="MSDSKTLVPVPSIESRGYAHPDVLVSTDWAAAHLNDPAVRLVES
                     NEDLLLYETGHIPGAVKLDWVTDLNDPVERDYLQRDQFQQLLRSRGINQDTTIVFYGD
                     KNNWWATYAFWVFRLFGLERLKLLDGGRLRWAEEGRPMTTQAANYAPGNIVVGERNDA
                     AIRAFRDEVLAHVRRRGQLVDVRSPEEFRGERLHMPDYPNEGAVRGGHIPGARSVPWA
                     RAVNPESHTFRPASELRRLYLEEQGLKPEEETIAYCRIGERSSHTWFALTYLLGFNRV
                     KNYDGSWTEWGNGVRLPIEK"
     gene            complement(5499..6263)
                     /locus_tag="VLD58_10215"
     CDS             complement(5499..6263)
                     /locus_tag="VLD58_10215"
                     /inference="COORDINATES: protein motif:HMM:NF001753.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacylase"
                     /protein_id="HSB54722.1"
                     /translation="MTDAPSIARTLLHQAERILVMTGAGISAESGVPTFRGAGGLWKE
                     FRPEDLATPGAFARDPRLVWEWYAWRRSLVAQCQPNPGHLALARWMSSRSGVTLVTQN
                     VDALHEAAARQVAPDRAATLAPIRVHGSIARSRCSRCDYSTDTDIPVDATSTETLPRC
                     PDCGALLRPDVVWFGESLPVSALERAESACVSADLCLVVGTAGAVYPAAAYVVAVERR
                     GRPVIVVDPGETAFDRIARVKLTGTAGEVLPGILEY"
     gene            complement(6295..>6730)
                     /locus_tag="VLD58_10220"
     CDS             complement(6295..>6730)
                     /locus_tag="VLD58_10220"
                     /inference="COORDINATES: protein motif:HMM:NF014688.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HSB54723.1"
                     /translation="SVRFAGMLPVLDKTIRRFAASDRQTRLELLLDYSQKLPPLPERL
                     VPLRDQGINRVPECQSPVFLFLERENGGVVLHADAPREAPTVRGFVSLLARAVNGARP
                     EEVASVPGDLLDQLGLSEALGMTRMQGLAAMIGRLKRMATTL"
BASE COUNT          994 a         2437 c         2265 g         1034 t
ORIGIN      
        1 ccccgaccct ctgccctcag tacccccgcg gcagccacac atctgaactg atccgctccc
       61 cgatcgacag gatcacgtcc cgctgcccgt agcccggcgc cgagacccgc accgactggg
      121 tccggcaccg gtccaccagg gtccggtcga acaccagccg gtactccccc cgcccgttgc
      181 tgaaggtgcc gtactgggtg ccgaggatct ggagccgcgc gcctgccagc ggctcgctgg
      241 tgccttcctt gaaaatccgg ccttcaacca ccgccatgcc cttggggacc gtcgagtcgg
      301 tctgttcctc cggaaccgag cagccgtgcg agagctcgac cggtgactcc cacggccggt
      361 tgtcccgcgt cccggagacc gggccgagct tgctcgacgg gcggccaaag agcctcttgg
      421 cttccgattc gagcgtggcc gagttgttgg cgagtggcgc cggtgccgcg atggccgcgg
      481 gaggagtagt ggtgaccgac gacccggccg gatcgttctc ctcgcccggg tctggccgag
      541 tcgcctggga gcgggccagg tccggcgccg cgttggggcg ctcttccggc gtaggtgtaa
      601 ccctcgcgcg ggaacccggc gtctcgtccg ggccgggtgt gagcggcacg gccggcggcg
      661 ttggttgcgg agtcgccgcc ggcacctggg gcgcggaagg tctgggcgtc ggcttggggc
      721 gaggcggggc gaagtcgagc tggatcgggc gctcggtggc ctgcgacgcg gtctggaccg
      781 gatggcgctg gctctcgagg gcggcgcgaa tcaggaggaa cagcaggacg agatggaggg
      841 aaacactgac caccgaagcc accgtgaggc gggaggcggc ccgcccatgg ggcagggtgg
      901 tggtgtagtg cttgacgcgt actgccatcg atcagtccgc cgctccgttc cctggggcac
      961 cctcttcggg atacgccgtc accggcgaaa ccgttgagtg ggacgggtcg gccggtgtca
     1021 gtatctcgtg gtccagtcca ccctggctgc acgccggcag cggacacaca tcaacgtttc
     1081 aggctgtccc tcgaactcct gccggccggt gcagtcggga cagaccgcgt aactcgtcac
     1141 catcttggga cctgccagcg tcggccgcat gacgccggtg cgggtcacca cgctccacat
     1201 gctgggccgg tcgtcccgaa gccggagctc ctccttctgg aaccgcatcg gcatgtgatc
     1261 gacctcgatc agcacgctgt cgtcgtccat ttccagcacc ggataccagg cgccccggcg
     1321 caatacatcc gccacccccg gcgatccggt ggcccacccg cgaatggcgg cattttcacc
     1381 cgaccggcgg aagggagggg ggctggtcat ccttcaacta tatccggaca tgcctcactc
     1441 cgcaccctct tcgttttatt cgccttcctt gagcgccccc gtcgggtaga ttggggcaga
     1501 atgtcctctg ccacgccgct gccccggacc accgggaccc gtatgcttgc cgatatgctg
     1561 ctcgcccttg ccggggtgat gcagcagctt cggcttggca ccgaaggcca ccccgccctg
     1621 gcggccagcc tggcgggact ggaacggcat ctcgagggac tcctgctcga acggtcctcc
     1681 ctctccattg aaatcggtgg ggtgcagctc ctggtcgaag ggatggagac caacgcctcc
     1741 ttcgagcccc tccgtgatct cgccatccag ttccgggagg ctggggtcgg cggcctgact
     1801 attctccccg gcatcacggc gctcgaactc cagcgggtgc tctcctcgat cgcccggccc
     1861 gatccaaacg tggcctggcc ggccaccccg cacatctcgc tccgggccct ccggcccagc
     1921 gggcagcaca tcgccgatcc ctggctcgcc cttgaacgac gggccttcga ggacaaccgg
     1981 ccgcgggcca cgcgggaccc tgccgagatc gccgtcgggc tcgagcttca tcccgccagc
     2041 atccagttcg atgcccgcat ggtggagctg ctggcccaga tcgccctccg tgccgtgggc
     2101 gacgccgacg aggccgccac gttggatgcg ctggtcctta tcctcgacgc agggaccctg
     2161 cgccgcctgc tcgggcccgc gggccccacc cgcgcggcgc gggaattcct cctcgctgcg
     2221 gcaccgctgc tctcgcctgc gacgctgctc cgtctctgcc aggccctcgc gaccggacgg
     2281 gccggcacga tctccgtcgg ggcgctccgg gtcctcgcca agctctccga cggcgccgcg
     2341 ccgggcagcc gttcctcgcg cctcgtggcc gaggagttcc accggctggt gacgcaggcg
     2401 tacgagcagg acacacctca ttcccccacc cggcttgccc ccgagcccga tcgggtcctc
     2461 aaactcgcgc tcgagagcgg catcctcgaa cccggcgccg agcttgccgc cgaccggatg
     2521 atcgcgcggc ggcaggtggg cgggctgctg gcgctcctcg acactgtgcc gcgggaagat
     2581 ccggtggccc gggcactccg ggctcggctc catcatcccc gcgcggtgcg ggtactgctc
     2641 gaggcaactc ctcccgacct cgaagcgctc gatcggctga tccccgccgc cggcctcgac
     2701 gccgcgccgg tgctgctcga tgccctggcc gagtcgcgtg agaaacgggt ccggctccgg
     2761 ctgatcgatc tgctgggccg ctacgatcag tcgatcgccc cgctgctgct cgagcggatg
     2821 gaagggatgc cctggtacgt ccagcggaat cttctcaccc tgctcggccg gcttcccgac
     2881 ctcccggtcg atttctcggc cgagccgctg ctgcagcatc gggacccgcg ggtgaagcac
     2941 gaggcgatcg tgctggccct gggcgatccc ggtctgcgtg accgcgccat cgccgacgcg
     3001 ctgaacagtg gctatgaacc atccgagcgc ctcgcgctcg cagccctcgc cagcggctgc
     3061 ccggtggagc tctatccccg ggtctacacc cgggtcgccg atccggagac cagccccgag
     3121 ctccgcgcgc tcgctatcag cgcggtagct acggtgaagg acccggtggt gctccggctg
     3181 cttcggcgca tggtgatcgc gcgcggcata cccggcctgg gtcgcctcgc gccgcggagt
     3241 cccccgatgc tcgcagcact ccggggactc gccacccatt gggccaacca tcccaaggtc
     3301 gggccgctgc tcgagagtgc ccgccagtcg cgcgatcccg aaatccgcga agcggcccgc
     3361 ccgcaccgcc gctccacccg gatgagccag gcatgaacac cgcgccgcgg ttcctcaacg
     3421 cgctccagca cgcgctggat ctccgggtgc gtccggccga cgcgacagtt cgcttcaccg
     3481 cggaggagac gctgaccagc gccgcgcggc agctggccga ggagaatccc gacgcggtct
     3541 tcaccttcga ggccagcggg atccgcttcg gtcccctgcc gctggcgggc ttcgaggcct
     3601 ggccctggac cacgaccatg gtgtcgcgcg gcatattccg gctccaggta gccgcaccgc
     3661 cggaaccggc cgcggtggca gcgttcctcg acctggcggt ggggctcatt cctcccgacg
     3721 cgccggtgcc ccaggacgcg ctgcgctgga ccagcgccga gcatcggccc caggcgccgc
     3781 aggacgagta tccgctcgac gaagcggttg ccgtggtgcg ccagctcttt gtcggggcgg
     3841 agaagggtga ggtgctccgt cgcggcgacg tggcggcggt ggtcgccgcg ctcgagtgcg
     3901 tgctggccgg ggaacatgga ccggcgctcc cgctgctcca caccggtgcc cgcgagcgtt
     3961 accagcccgc ccacgccctc aacaccgccc tgctcggcat gcgcgtggcc gatgcgctcc
     4021 atcttggccc cgatgagcgg cgcgagtgcg gcgtagcggc cctgttacac gacatcggca
     4081 tggcccggct cccggtgccc gcgccggacc gtttcacctc tcaggaccgc gcccgggtgc
     4141 ggggccatcc gctcgagggc gcccggctgc tgctccgtga aggggagatt ttcgagggtg
     4201 ccgcgatcgt ctcctacgag caccatctgc ggcaggacgg ttccggctat ccccgcctca
     4261 actacccccg cgagccccac gtactgagcc ggatcgtggc ggtggtggat gcattcgacg
     4321 cgctcctcgc accccgcagc gatcggcccg gcctcgatcc cgcgacagcc ctccgcgagg
     4381 tggaacggtc ggccgtcacc cagttcgatc cccggatcgt ggcggcgttc agcgaggcgg
     4441 tggtccaggc cgcggggcac aggcagctct ccttgacatt ccgacaagtt tagtcgtatt
     4501 tctccatctc cccgagcacg gtgctgatgg tcatgagcga ttccaagacg ctggtcccgg
     4561 tcccctcgat tgagagccgc ggttacgccc accccgacgt cctggtctcg accgactggg
     4621 cggcggcgca tctcaacgac cccgcggtcc ggctggtgga gtcgaacgag gatctgctgt
     4681 tgtacgaaac cgggcacatt cccggcgcgg tcaagctcga ctgggtcacc gatctcaacg
     4741 acccggtaga gcgggattac ctccagcgcg accagttcca gcagctgctg cgttcccgcg
     4801 gcatcaacca ggacacgacg atcgtgttct atggggacaa gaacaactgg tgggcgacct
     4861 acgccttctg ggtgttccgg ctgttcgggc tcgagcgcct caagctgctc gatggcgggc
     4921 ggctccgctg ggcggaagag gggcggccga tgacgactca ggcggccaac tacgccccgg
     4981 ggaacatcgt ggtgggcgag cggaacgacg ccgcgatccg cgccttccgc gacgaggtcc
     5041 tggcccacgt acggcgccgg ggtcagctgg tcgatgtgcg gagccccgag gagttccggg
     5101 gcgagcggct ccacatgccc gactacccca atgaaggggc ggtgcgcggc gggcacattc
     5161 ccggcgcgcg gagcgtgccc tgggcccggg cggtgaaccc cgagagccac accttccgtc
     5221 ccgcctcgga actccgccgg ctctatctgg aagagcaggg gctcaagccg gaggaagaga
     5281 ccattgccta ctgccgcatc ggcgagcgct cctcccacac ctggtttgcg ctgacctacc
     5341 tgctcggctt caaccgggtg aagaactacg acgggtcgtg gaccgagtgg gggaacgggg
     5401 tccggctgcc gatcgagaaa tagtcaggcg gcaacgcggc aagacggcaa ggcggcaagg
     5461 ggagggcggt catcccgagc gcagcgagag atccctgatc agtactccag gatcccaggc
     5521 agcacctccc cggccgtccc cgtcagcttc acgcgcgcga tccgatcgaa cgcggtttcg
     5581 cccggatcca ccacgatgac cgggcggccg cgccgctcca ccgccaccac gtaggccgcc
     5641 gccggataca ccgcgcccgc agtccccacc accaggcaca gatccgcact gacgcaggcc
     5701 gactcggccc gctcgagcgc cgacaccggc agcgattcgc cgaaccacac cacatcagga
     5761 cggaggagcg cgccgcagtc cgggcagcgg ggcagcgtct cggtagacgt tgcgtcgacc
     5821 ggaatgtcag tgtcggtcga gtagtcacac cggctgcacc gggaccgcgc gatggagccg
     5881 tggacccgga tcggagccag cgtcgccgcc cgatccggcg cgacctgtct ggccgctgct
     5941 tcgtgcagcg catcgacatt ctgggtgacg agggtgaccc cgctccgaga gctcatccag
     6001 cgggccagtg ccaggtgccc cgggttcggc tgacactgcg ccaccaggga gcgccgccag
     6061 gcataccact cccataccag ccgaggatcg cgagcgaagg cgccgggtgt ggcgagatcc
     6121 tcgggccgga actccttcca caacccgcct gccccccgaa aagtgggcac gcccgactcg
     6181 gcgctgatgc cggcaccggt catgacgagg atgcgttcag cctgatgaag gagagtcctc
     6241 gcgatggagg gggcgtctgt cattccgagc gaagcgggga ggccctgatc ttccctacag
     6301 ggtcgtcgcc atcctcttga gtcggccgat catcgcggcc aggccctgca tccgggtcat
     6361 gccgagggcc tcggagagcc cgagctggtc gagcaggtcg ccgggaacgc tcgcgacctc
     6421 ttccggcctg gcaccgttga ccgcgcgggc gagaagcgag acgaatccgc gcaccgtggg
     6481 agcctcacgc ggcgcgtcgg catgcagcac caccccgcca ttctcccgtt cgaggaagag
     6541 gaacaccggc gactggcact cgggcacccg attgatgccc tggtcccgga gaggcaccag
     6601 gcgttcaggg agcggcggaa gcttctgcga gtagtccaac agcagctcga gccgggtctg
     6661 gcggtcggag gcggcgaagc ggcggatggt cttgtcgagg acgggcagca tgcctgcaaa
     6721 tctaacggac
//
LOCUS       DATIFF010000689         1146 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2241361, whole genome shotgun sequence.
ACCESSION   DATIFF010000689 DATIFF010000000
VERSION     DATIFF010000689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2241361"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            70..1032
                     /locus_tag="VLD58_10225"
     CDS             70..1032
                     /locus_tag="VLD58_10225"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB54724.1"
                     /translation="MAEFLIQRGLISLVTLFLITVIVFAGVRMIPGDPARVMAGTEAD
                     AAGLEEIRQKYGLRDPLPIQYAKWVRRALRGDLGESIRTRESVLRLVGQKLPITLQLA
                     AYSLVVALSIAIPVGVLAAVRRNTAWDYLASSVSLCGVSIPNFWLGIMLILLLSVRLR
                     WLPASGFVPLFEDPWANTERLLMPAVVLGSALAAVLMRQTRNSMIEVLSADYVRTAYA
                     KGLRTGVVIFRHAIRNGLIPVITIFGLQLGALIGGAVVTEQIFVVPGFGRLILEAVFT
                     RDYPVVQGVVLITASAYVLVNLLVDVSYSLLNPRIRIKGGRDEP"
BASE COUNT          141 a          394 c          401 g          210 t
ORIGIN      
        1 tggaactagg ctcaacctgg ccgcaggggc tctttcgggc ccctgcggcc gacctcatcg
       61 gcgggtgtcg tggccgaatt cctgatccag cgcggcctca tctcgctggt caccctgttc
      121 ctcatcacgg tcatcgtgtt cgccggggtc cggatgattc ccggcgaccc cgcgcgtgtg
      181 atggcgggga ccgaagcgga cgccgccggg ctcgaggaga tccgtcagaa gtacggactg
      241 cgggatccgc ttccgatcca atacgcgaag tgggtccgcc gggcgctgcg gggggacctc
      301 ggcgagtcta tccgcactcg cgagtccgtg cttcggctcg tcggacagaa gctgccgatc
      361 accctccagc tcgcggcgta ctcgctggtg gtcgcgctct cgatcgccat cccggtcggc
      421 gtgctggcag ccgtgcgccg gaacacggcg tgggactatc tggcgagtag cgtgtccctg
      481 tgcggcgtgt cgatcccgaa cttctggctg ggaatcatgc tgatcctcct gctctcggtc
      541 cggctccggt ggctgcccgc ctcgggtttc gttccgttgt tcgaggaccc gtgggcgaac
      601 accgagcgcc tgctgatgcc ggcggtggtg ctgggctctg cgctggccgc ggtcctgatg
      661 cgccagaccc gcaacagcat gatcgaggtg ctgagcgcgg actacgtccg caccgcctat
      721 gcgaaggggc tccggaccgg cgtcgtcatc ttccgccacg cgatccggaa cggcctgatc
      781 ccggtcatca cgatcttcgg cctccagctc ggcgcgctca tcgggggggc agtggtgacc
      841 gagcagatct tcgtggtgcc gggcttcggc cggctgatcc tggaggccgt gttcacccgc
      901 gactacccgg tggtgcaggg ggtcgtgctg atcacggcca gcgcctacgt cctcgtgaat
      961 ctcctcgtcg acgtctcgta ctcgctcctc aatccgcgga tccggatcaa ggggggacgg
     1021 gatgagccat gacaccgtgc cgtcggcggg caccgcggac gccgccctcg cccacgggcc
     1081 ggcggtcggg ggggccgtcg gcgaccgtct gcgcgcgggc tggcggcgtc tcgtccggcg
     1141 cccacc
//
LOCUS       DATIFF010000690         1055 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1319218, whole genome shotgun sequence.
ACCESSION   DATIFF010000690 DATIFF010000000
VERSION     DATIFF010000690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1319218"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(116..>1055)
                     /locus_tag="VLD58_10230"
     CDS             complement(116..>1055)
                     /locus_tag="VLD58_10230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54725.1"
                     /translation="TTSCCSRRRSCGTWQPRWSMGGARSRRRLALGFLVELFAIANLA
                     FLAMDIFLAHTVNRFRAWPEWIPIGFSGVAAPALAVGLWWANRRGGDWRPARGGAVVG
                     VLAIVVGIAGLLFHLESQFFQNMSLKSLVYTAPLAAPLAYAGLGLVLLLNRMVPPESL
                     EWDRWLALLAGAGFAGNFALALLDHAQNGFYYVSEWLPVAASAYAVVFLGMVVLHPQD
                     RTLLRVTLGVLAAQIAIGLLGFGFHLVGDLTRPSGGLRDNFLFGAPVFAPLLLPNLAV
                     LAGIAVWDLWRALPMDLSNTSPTTPDVGRPEIRGNA"
BASE COUNT          205 a          379 c          346 g          125 t
ORIGIN      
        1 tccacctcga cggtgatccc ctccctcccg agcagccgct cggcgagaaa gaaaccggcg
       61 gggccggcgc cgacgatcgc cacgcgcagc gggtcggatg gggtgccggg acgggtcatg
      121 cgtttcctcg gatctccggg cggcctacat caggagtggt tggagaggtg ttggagaggt
      181 ccatcgggag cgcccgccac aggtcccaca ccgcgatccc cgcgagcacc gccaggttcg
      241 gaagcagcag cggggcgaac accggagcgc caaagaggaa attgtcgcgg agtccgcccg
      301 agggccttgt gagatcgccc accaggtgga acccgaaccc cagcaagccg atcgcgatct
      361 gcgcggcgag gacgcccagc gtgacgcgga gcagcgtccg gtcctgcggg tgcaacacca
      421 ccatgcccag gaagaccacg gcataggcgc tcgccgccac cggaagccac tcgctcacgt
      481 agtagaatcc gttctgtgcg tgatcgagca gcgccagcgc gaaattcccc gcgaagccgg
      541 cgcccgccag cagtgccagc cagcggtccc actccagcga ctcgggcggc accatccgat
      601 tgagcagcag caccaggccg agcccggcgt aggccagtgg cgcggcgagc ggtgccgtgt
      661 agaccaggct cttgaggctc atgttctgaa agaactgact ctcgagatgg aacagcaggc
      721 cggcgatgcc cactacgatc gccaggacgc cgaccaccgc cccgccccgc gccggccgcc
      781 aatcgccgcc acgacggttc gcccaccaca gccccaccgc gagcgccgga gccgccacac
      841 ccgagaaccc gatgggaatc cactcgggcc acgcccgaaa gcggttgacg gtgtgcgcca
      901 ggaagatgtc catcgccaga aaggcgagat tggcgatcgc gaacagctcg acgagaaacc
      961 cgagcgccag gcggcgccga gacctagcgc ctcccatgct ccagcgcggc tgccatgtcc
     1021 cgcagctccg ccgtcttgag cagcagctgg tagtt
//
LOCUS       DATIFF010000691         3387 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_88909, whole genome shotgun sequence.
ACCESSION   DATIFF010000691 DATIFF010000000
VERSION     DATIFF010000691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3387
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88909"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1247
                     /locus_tag="VLD58_10235"
     CDS             <1..1247
                     /locus_tag="VLD58_10235"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HSB54726.1"
                     /translation="EGKSASSMITVVQVPVSTVLVTPALSTLAAGKTLELSVTLRDDL
                     NNVLIGRTVNWTSSDPTIASISGAGGVVTGLKPGTVTLTATSEGKSGTAQVAVILGAP
                     ARLHFVQQPSSTQAGSVITPEVAVEIQDAAGNRILPATSTVTVALATPGGALLGGTRS
                     VNAVDGLARFGDLTVDVAGSYSLTAASAGLASATSASFAVTVRPATRLAFQQQPLSTT
                     AGTSLGTVTVELQDATGARVTGQVAVVTLALGSNPGGATLSGTLTRTSVNGLATFTGL
                     SLDRAGTGYTLTATASGLGGATSSAFTIAAGPPSQLKFVVQPCPAPCPVGALLAPPPQ
                     VAVQDALGNTVTGSTATISLTLKGGGKETVLSGTSSRAAVAGNAAFPDLTINRAAVGL
                     TLRAASRGLSDGTSAAFGIAGP"
     gene            1354..2883
                     /locus_tag="VLD58_10240"
     CDS             1354..2883
                     /locus_tag="VLD58_10240"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HSB54727.1"
                     /translation="MIRFNHITGSLAGRSVEYDKRSIRVGTSGDCDVRYDLERDPEVG
                     RYHAAVVFKENAYHLLDLGQAGGVWVNGERVASQILRSGDRVRFGIDGGPEAEVAVVI
                     DANYDAAQDAARMVETFKGKTRETSAIRLVAAAAERVAEERAKAGGAKSRRTMEVMAT
                     AISDVGDLMKLQTRKRWVKIVGIVAAVALVIIGIQGAVIYAQQRKITLLLDAKSRYDA
                     QIHSIQVEMDATRDSIRLAELEHKLLETTASAERALAELARTNKEKALEVAESGDELD
                     REIRQILRQFDATTYAVPPIFKERLAYHIGELQKAGPIARLIYRRKVKYWPQITAEFK
                     ALELPEVMAYVAWTESQFDPMAKSSAGALGMWQMTRTTAQGLGLRVEGGVDERTDVSK
                     QTRAAAKYLAGLLAEFGEDAFMLAMASYNKGENGVRRVLRKVAQTPGGFKKSKRDFWH
                     LYRLKLLPEETREYVPKILAAAIVCNNPQRYGLADAVAVADTTAAPAKPAGRRSASTG
                     R"
     gene            3029..>3387
                     /locus_tag="VLD58_10245"
     CDS             3029..>3387
                     /locus_tag="VLD58_10245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54728.1"
                     /translation="MRRILYVVPLVLAMACNQHKEELAKALADAQSLAAEKDSLITEV
                     LETSKFVNGVNEELAKARSAVVSSANQPEGGTPAERDRAARAAALERVQALVARLNES
                     EQRLEQSTQRARSLSGR"
BASE COUNT          589 a         1133 c         1167 g          498 t
ORIGIN      
        1 tcgaggggaa gtccgcctcg tcgatgatca cggtggtgca ggtgccggtg agcaccgtcc
       61 tggtgacgcc ggcgctctcg acgctcgccg cgggcaagac acttgagctc agcgtgacgc
      121 tgcgggacga cctcaataac gtcctcatcg gccggaccgt gaactggacc tcctccgacc
      181 cgacgatcgc gtcgatctcg ggcgcggggg gcgtggtgac gggcctcaag cccgggacgg
      241 tcacgctcac ggcgacctcc gaaggaaaga gcggcacagc gcaggtcgcc gtcatcctcg
      301 gtgccccggc gaggctccac ttcgtccagc agcccagctc gactcaggcg ggctcggtga
      361 tcacgccgga ggtggcagtc gagatccagg acgccgccgg caaccgcatc ctcccggcca
      421 cctcgacggt cactgtcgcg ctcgccaccc cgggcggtgc cctactgggc ggcacccggt
      481 cggtcaacgc cgtggacggc ctcgccagat tcggcgatct cacggtggat gtggcgggga
      541 gctattcgct gaccgccgca tcggccgggc tggccagcgc gaccagcgca agtttcgcgg
      601 tcaccgtgcg ccctgccacc cggctcgcct tccagcagca gccgctgtcg accaccgcgg
      661 gcaccagcct cggaactgtg acggtggaac tccaggatgc gaccggagcc cgggtcacgg
      721 gccaggtggc cgtggttacc ctcgcccttg gcagcaatcc cggcggcgcg accctgagcg
      781 gcaccttgac gcggaccagc gtgaacggcc tggcaacctt taccgggctc agcctcgatc
      841 gcgccggcac ggggtatacc ctgaccgcca ccgccagcgg cctcggcggc gccaccagca
      901 gtgcattcac catcgcggcg ggccccccaa gccagctcaa gttcgtggtg cagccgtgcc
      961 cggcgccctg cccggtcggc gctctgctgg caccgcctcc gcaggtggcc gtacaggatg
     1021 cgctcggaaa cacggtcacc ggctccacgg cgaccatttc gctgaccctg aagggaggag
     1081 ggaaggaaac cgtgctcagc ggcaccagca gcagggccgc ggtggccggc aacgccgcgt
     1141 tcccggacct cacgatcaac cgcgcggcgg ttggcctgac actccgggct gcatcgaggg
     1201 gactttcgga tggcaccagc gcggccttcg gtattgcggg tccgtgatcg tggcctgatg
     1261 gcacgcgccg gcggttccct ctggcgcgaa agcgggagaa ccctgtaagc tcctgccacc
     1321 tcggaggtag caccgcctcc agaactcgat cccatgatcc gcttcaatca catcaccggc
     1381 agtctcgccg ggcgctcggt cgaatacgac aagcgctcga tccgggtggg caccagcggc
     1441 gattgtgacg ttcgctacga cctcgagcgc gatcccgagg tcgggcgcta tcacgcggcg
     1501 gtggtcttca aggagaatgc ctaccacctg ctcgacctgg gccaggccgg tggcgtctgg
     1561 gtgaatggcg agcgggtggc gagccagatt ctccggagtg gcgaccgggt gcggttcggg
     1621 atcgatggcg ggccggaagc ggaagtcgcg gtggtgatcg acgcgaacta cgatgcggcc
     1681 caggatgcgg cccggatggt ggagaccttc aaggggaaga cccgggagac ctccgccatc
     1741 cggctggtgg ccgccgcggc cgagcgggtg gccgaggagc gcgccaaggc gggcggggcc
     1801 aagtcccggc gcacaatgga ggtgatggcc accgccatca gcgacgtcgg cgacctgatg
     1861 aagcttcaga cgcgcaagcg ctgggtgaag atcgtgggca tcgtggcggc cgtggccctc
     1921 gtcatcatcg gcatccaggg cgcagtgatc tacgcccagc agcggaagat caccctgctg
     1981 ctcgacgcca agagccgcta cgacgcccag atccactcga tccaggtgga gatggatgcc
     2041 acccgcgact cgatccgtct ggccgagctg gagcacaagc tgctcgagac caccgccagc
     2101 gccgagcggg ccctggccga actggcccgg accaacaagg agaaggccct ggaagtggcc
     2161 gagagtggcg atgagctgga ccgggagatc cgccagatcc tccggcagtt cgacgcgacc
     2221 acgtacgcgg tgccgccgat cttcaaggag cggcttgcct atcacatcgg cgagctgcag
     2281 aaggcggggc cgatcgcgcg gctgatctac cggcggaagg tgaagtactg gccccagatc
     2341 accgccgagt tcaaggcgct ggagctgccc gaagtgatgg cctatgtcgc ctggaccgag
     2401 agccaatttg acccaatggc caagagctcg gccggagcac tcggcatgtg gcagatgacc
     2461 cggactaccg cccaggggtt gggactcagg gtagagggcg gggtcgacga acgaaccgac
     2521 gtctccaagc agacccgggc ggcggcgaag tacctggccg gcctgctggc ggaattcggt
     2581 gaggacgcgt tcatgctggc gatggcgagc tacaacaagg gcgaaaacgg ggtacggcgg
     2641 gtgctccgca aggtggccca gacgccggga gggttcaaga agtcgaaacg ggacttctgg
     2701 cacctctatc gcctcaagct cctccccgag gagacccggg aatacgtccc gaagatcctg
     2761 gcggcggcca tcgtctgcaa caacccccag cgctacgggc tggccgacgc ggtggctgtc
     2821 gccgacacca ccgcggcacc ggctaaacct gctggccgga ggtcggcctc aaccgggcgt
     2881 tgagtctcgg aactggagat ttgataacag ctttgtcatc tccccctgtg agtgcggtca
     2941 cttccgtata agtcccatgc gtttaggatt cgtgcacttg caggaccctg cccagaagtt
     3001 ggtttttgcc ccctgctgga ggttccggat gcgccgcatc ctgtatgtcg ttccgctggt
     3061 cctcgccatg gcctgcaatc agcacaagga agagctggcc aaggccctcg ccgacgcgca
     3121 gtcgctcgcg gcggaaaagg acagcctgat taccgaagtg ctggagacct cgaagttcgt
     3181 caacggtgtg aacgaggagc tggccaaggc gcggagcgcc gtggtctcct ccgccaatca
     3241 gcctgaaggt ggcaccccgg ccgagcgcga tcgcgcggcc cgcgccgcgg ccctggagcg
     3301 ggtacaggcg ctggtggccc ggctcaacga gagcgagcaa cggctggagc agagcaccca
     3361 gcgggcccgt tcgctctccg gccgcaa
//
LOCUS       DATIFF010000692         1068 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1934848, whole genome shotgun sequence.
ACCESSION   DATIFF010000692 DATIFF010000000
VERSION     DATIFF010000692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1934848"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..290
                     /locus_tag="VLD58_10250"
     CDS             <1..290
                     /locus_tag="VLD58_10250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54729.1"
                     /translation="WGYSRAQSGEDLAERYRELLAAVNSLSLFSGFCYTQFTDTYQEA
                     NGLARADRSPKFSLEEMAAATRGEVLPQQPSQVAAGIGGAGTRHDPHAPDE"
     gene            315..>1068
                     /locus_tag="VLD58_10255"
     CDS             315..>1068
                     /locus_tag="VLD58_10255"
                     /inference="COORDINATES: protein motif:HMM:NF013269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54730.1"
                     /translation="MTKPDGRQLILYSREPIAEGIQATSPGTDPPGTQTHLRWHPLRG
                     EWVAYASHRQHRTFLPPAEYNPLAVTTDPSQPTELPPGDYDVAVFENRFPTLTEQAEE
                     PAPPAIVPTRPGKGACEVVVFTQDPNASLGALPLWHLEELLEVWADRYRELGQRDDID
                     YVMPFENRGVEVGVTLHHPHGQIYAYPFIPPIPARELAQQGAYLAEHGRGLLEDLIGE
                     ELVDGRRMLYTGERAVAWMPVFARYSYEVWVAP"
BASE COUNT          169 a          377 c          368 g          154 t
ORIGIN      
        1 cctgggggta ttcgcgggcc cagagcggcg aggacctcgc ggagcgctac cgggagcttc
       61 tcgcggcggt gaattcgctc tcgctctttt ccgggttctg ctacacgcaa ttcacggata
      121 cctatcagga agccaacggg ctggcgcggg cggaccgcag ccccaaattc tcgctggagg
      181 agatggcggc cgcgacgcgc ggtgaggttc tgccacagca gcccagccag gtggcggccg
      241 gcatcggcgg cgccggcacc cggcacgacc cccacgctcc ggacgaatga gaaggtggga
      301 tgtataaaaa ggttttgacc aagcccgacg gccggcagtt gattctctat tcgcgagagc
      361 cgatcgcgga gggcatccag gcgaccagcc cggggaccga tccccccggc acgcagaccc
      421 atctgcgctg gcaccccctg cgcggcgagt gggtggccta cgccagccac cgccagcacc
      481 ggacgttcct gccgccggcc gagtacaacc cgctcgcggt caccaccgat ccgtcgcagc
      541 cgaccgagct gccgccgggc gactacgacg tggccgtgtt cgagaaccgc ttccccactc
      601 tgaccgaaca agccgaggag ccggcgcccc ccgccatcgt gcccacccgg ccgggcaagg
      661 gggcctgcga ggtcgtggtc ttcacccagg acccgaacgc gtccctgggc gcgctccccc
      721 tctggcatct ggaggagctg ctggaggtct gggccgaccg ctaccgtgag ctggggcaac
      781 gggacgacat cgactacgtg atgcccttcg agaaccgcgg cgtcgaggtg ggggtgacgc
      841 tccatcatcc gcacgggcag atctacgcct atccgttcat cccgcccatc ccggcgcggg
      901 agctcgcgca gcagggcgcc tacctggcgg agcacggacg cggcctgctg gaggatctga
      961 tcggcgagga gctcgtggac ggccgtcgga tgctctacac gggcgagcgg gcggtcgcct
     1021 ggatgcccgt gttcgcgcgc tactcctacg aggtctgggt ggcgccgc
//
LOCUS       DATIFF010000693         1923 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_243661, whole genome shotgun sequence.
ACCESSION   DATIFF010000693 DATIFF010000000
VERSION     DATIFF010000693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1923
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_243661"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            209..610
                     /gene="apaG"
                     /locus_tag="VLD58_10260"
     CDS             209..610
                     /gene="apaG"
                     /locus_tag="VLD58_10260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HSB54731.1"
                     /translation="MPQRPFYYRQTDGIRISVRPLYLPERSNPERQQFVFAYFVRIEN
                     VGSETAQLRTREWLIHDSIGEETVVEGEGVVGEQPTLAQGQVHEYQSFCVLKSPSGYM
                     EGRYHFLRADGLTFPASIPRFQLEANESAER"
     gene            591..1922
                     /gene="tilS"
                     /locus_tag="VLD58_10265"
     CDS             591..1922
                     /gene="tilS"
                     /locus_tag="VLD58_10265"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR02432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HSB54732.1"
                     /translation="MNRPSDEAFARRLSRLRLRSGPALVAVSGGVDSLVLLDLLVRTR
                     DRHGLELIVAHADHGIHPESAAVAAAIEAHALRLGLSSVTGRLKLGPGTSETRARTAR
                     MRWLDRTRREHGARYILLAHHADDQAETVLMRLLRGSGPAGLAGMPARRGPLVRPLLG
                     CSRKALVKYAEARGLEWWNDPANADPRHLRSWIRATLLPELEGRLPDVRQRLSQASRH
                     AASHRRAWSAVLRRWPGLDYRCEARVHSLSLPVLAGMPASLRFAVLETLARRAGALPG
                     IGRLRRAWRSLEEAQSGATADLGGGWRLERAWDRLRLLPPEPAGAPDRQSIATQRGSM
                     NWGDFRLDWATEPAPPTQPRDGRSAWFIPGTLVVRGWRAGDRVAPLHGAGHRLAVRCF
                     QDARVPSSDRSRWPILEGGGELAWIPAVCRADVLVPRAGEPALRVAVTRHG"
BASE COUNT          262 a          685 c          658 g          318 t
ORIGIN      
        1 atgcgcaagt acatcgaccc ggccaaaatc acgatggtga aggcgggaga tttccagaag
       61 aagccggagc cggcgaaacc gtaggtcctc agggaaggtc ggttggcagg gatagagggc
      121 cggtggccgg aggccggagg ctggagtgtg gttcctccgg cctccggcct cctgcctccg
      181 gccctttctt cacgctacct ttccccccat gccccagcgg cctttctact accgtcagac
      241 cgacggcatc cgcatctctg tccgtcccct gtacctgcct gagcgctcca accccgagcg
      301 ccagcagttc gtcttcgcct acttcgtccg gatcgagaat gtgggcagcg agaccgccca
      361 gctccgcacc cgcgagtggc tgattcatga ctcgatcggc gaagagaccg tggtcgaagg
      421 ggaaggggtt gtgggcgagc agcccaccct cgcgcagggt caggtgcacg agtaccagag
      481 cttctgtgtg ctcaagtcgc ccagcggcta catggaaggg cggtaccact tcctccgtgc
      541 cgacggactc accttcccag ccagcattcc ccgcttccag ctcgaagcca atgaatcggc
      601 cgagcgatga ggcctttgcc cgtcggctga gccggctccg actccggtcc gggcccgcgc
      661 tggtcgcggt ctccggggga gtggattcgc tggtgctgct cgatctcctg gtccgcaccc
      721 gggaccggca cgggctcgag ctgatcgtcg cccatgccga tcacgggatt cacccggaga
      781 gcgccgccgt cgccgcggcc atcgaggcac acgcccttcg ccttggactg tcgagcgtta
      841 ccggccgtct caagttgggc cccggcacca gcgagaccag ggcccgcact gcccggatgc
      901 gctggctcga ccgcacccgg cgcgagcacg gcgcccgcta catcctgctg gcccatcacg
      961 ccgatgatca ggccgagacg gtgctgatgc gcctgctccg gggctccggc ccggcggggc
     1021 tcgccggcat gcccgcccgc cggggaccgc tggtgcggcc attgctcggt tgttcccgga
     1081 aggctctggt gaaatacgcc gaggcgcggg gactcgagtg gtggaacgat cccgccaacg
     1141 ccgatccccg ccaccttcgc tcctggattc gcgccacctt gcttcccgaa ctggaaggac
     1201 gcctccccga cgtccgccag cggctctcgc aggcgtcgcg ccatgccgcg agtcaccgtc
     1261 gggcgtggtc ggcggtgctc cgccggtggc cggggctcga ctaccgctgt gaggccagag
     1321 tgcattccct ctctctgccg gtgctggcag gaatgccagc ttcgctgcgc ttcgccgtgc
     1381 tcgaaacgct ggcccgccga gccggcgcgc tgcccggcat cgggcgtctg cggcgcgcgt
     1441 ggcggtccct cgaggaagcg cagagtggcg ccaccgccga tctgggtggc ggctggcgac
     1501 tggagcgtgc ctgggaccgg ctccgtctcc ttccgccgga gccggcaggc gcgccggacc
     1561 gtcaatcgat cgcgactcaa cggggtagca tgaactgggg tgacttccgc ctcgattggg
     1621 ccaccgagcc cgcaccaccg actcagcctc gcgacggccg ctcggcctgg ttcatccccg
     1681 gcacgctggt ggtccggggg tggcgcgccg gcgaccgggt ggcgccgctg catggcgccg
     1741 gtcaccggtt ggcggttcgt tgctttcagg acgcccgggt ccccagcagc gaccggtccc
     1801 gctggccgat tctcgagggc gggggagaac tggcttggat tccggcggtc tgccgcgccg
     1861 atgtgctggt gccccgtgca ggtgagccgg cgctccgggt agccgtgacc cgccatggat
     1921 gat
//
LOCUS       DATIFF010000694         2905 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1780316, whole genome shotgun sequence.
ACCESSION   DATIFF010000694 DATIFF010000000
VERSION     DATIFF010000694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2905
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1780316"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1007)
                     /locus_tag="VLD58_10270"
     CDS             complement(<1..1007)
                     /locus_tag="VLD58_10270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030257 - type III protein secretion
                     system complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0046034 - ATP metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FliI/YscN family ATPase"
                     /protein_id="HSB54733.1"
                     /translation="MTAAVELGKYRACLETLQPVQVHGKVTQVVGLVVEAAGPACRLG
                     AVCDIFTREGGRPLAAEALGFRERRVLLMPLEEIRGIGPGCRVVARQQRATVRVGPDL
                     LGRVIDGLGAPMDGRGPVAGSAEYPLYAAAVNPMRRRRIHEPLDLGIRAVNGLLTVGC
                     GQRIGVFAGSGVGKSVLLGMIARTTAADVNVIALIGERGREVNDFLEKDLGPEGLRRS
                     VVVVATSDRLPLIRTRGAFLATAIAEYFRDQGCRVNLMMDSVTRFAMAQREIGLAVGE
                     PPTTKGYTPSTFTLLPKLLERAGMAPKKGSITGLFTVLVEGDDMDDPIADAVRSILDG
                     H"
     gene            complement(1014..1745)
                     /locus_tag="VLD58_10275"
     CDS             complement(1014..1745)
                     /locus_tag="VLD58_10275"
                     /inference="COORDINATES: protein motif:HMM:NF014196.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliH/SctL family protein"
                     /protein_id="HSB54734.1"
                     /translation="MSTPPATPPGYCFPRIAGTAAERCEGRDATPPAFRRLSPGGPAA
                     ACRSSKPRGARLPEPSRVDLEQDAYCRGFSDGEKSGFEQGERAGLDAAAASTGGLVQS
                     LEQLLADLKQLQRRACRDLESEIVRLALDVARKVVGREVQSDVEAVAGIVRDAVNRVE
                     HAEQITIRMNPGDLQRLAELKPRLLDELADTGRARFEADAAVTSGGCRVESDSGDIDA
                     RLEQRFKIVEEAFRAEWNKDAAPQG"
     gene            complement(1761..2726)
                     /gene="fliG"
                     /locus_tag="VLD58_10280"
     CDS             complement(1761..2726)
                     /gene="fliG"
                     /locus_tag="VLD58_10280"
                     /inference="COORDINATES: protein motif:HMM:TIGR00207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009433 - bacterial-type flagellum basal
                     body, C ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HSB54735.1"
                     /translation="MPMDTQSLSGSLKAAILIRSMGERSAAGIISRLTAEERELVNRH
                     LNQIGTPAPELVDQVAQEFTLMAQRSKSGALALPAPSARGDSDGKGVEGLDALKSLSP
                     DDIYELIKDEHPQTMAIVLIHLKTAAASEVISKMPDEIKTDVALRIAGMEKVIGAMVD
                     EVNDVFKEILKNKKTSVASIGGGVDRLAEILNQADEISSELILNEIEEANAELAAQIK
                     QKMFVFEDLVLVDDRGFQKLLRRVETKELSVALKAASEEVKQKVFKNMSERASEMLRE
                     EMETLGPVRMKEVSDAQQAITAIIQEMEAKGEVIISGRRGEQIVS"
BASE COUNT          408 a         1064 c          942 g          491 t
ORIGIN      
        1 atatgtccgt ccaggatgga acgcaccgca tccgcgatcg ggtcatccat gtcgtcgcct
       61 tccaccagca cggtaaaaag cccggtgata ctccccttct tcggcgccat cccggcgcgc
      121 tccagcagct tcggcagcag cgtgaacgtc gacggcgtgt accccttggt ggtgggcggc
      181 tcgcccacgg ccagaccgat ctcccgctgc gccatggcga agcgggtcac cgagtccatc
      241 atcaggttga cccggcagcc ctggtcgcgg aaatattcgg cgatggccgt ggcgaggaag
      301 gcgccgcgcg tgcggatcag cggcagccgg tccgaggtag ccaccaccac caccgagcgc
      361 cgcagccctt ccgggcccag gtccttctcg aggaaatcgt tgacctcgcg cccgcgctcg
      421 ccgatcaggg cgatgacgtt gacatcggcg gcggtcgtgc gggcgatcat gccgagcagc
      481 acgctcttgc ccacgcccga gcccgcaaac acgccgatgc gctgcccgca gcccacggtc
      541 agcagcccgt tgacggcgcg gatgccaagg tcgaggggct cgtgaatgcg gcggcggcgc
      601 atggggttca cggccgcggc gtacagcggg tattccgcgg agcccgccac cggcccccgg
      661 ccgtccatcg gcgcccccag cccgtcgatc acccgcccga gcaggtcggg gccgacccgc
      721 accgtcgcgc gctgctggcg ggccacgacc cggcagccgg gcccgatgcc gcggatctcc
      781 tccagcggca tcagcagcac gcgccgctcg cggaacccca gggcttcggc ggccagcggc
      841 cgcccgcctt cacgggtgaa gatgtcgcac accgcgccga ggcggcaggc cggcccggcc
      901 gcctccacca ccagcccgac cacctgggtc accttgccgt gaacctggac cggctggagc
      961 gtctccaggc acgcccggta tttgcccaat tcgacggcgg ccgtcatgcg cgttcatccc
     1021 tgcggggcgg catccttgtt ccattcggcc cgaaaggcct cttccacgat tttgaaccgc
     1081 tgctccaggc gggcatcgat gtcgccggag tccgactcga cccgacagcc gccggaggtg
     1141 acggcggcgt cggcctcgaa gcgggcccgg ccggtatcgg ccagctcgtc gagcaggcgg
     1201 ggcttgagct cggccagccg ctgcaggtcc cccgggttca tgcggatcgt gatctgctcg
     1261 gcgtgctcca cccggttcac ggcgtcccgc acgatccccg ccacggcctc gacgtcgctt
     1321 tgcacctcgc ggccgacgac cttgcgggcc acgtccaggg ccagccggac gatctcgctc
     1381 tccaggtccc ggcaggcccg gcgctgcagc tgcttaaggt ccgccagcag ctgctccagg
     1441 ctttgcacca gcccgcccgt cgacgccgcg gcggcgtcca gcccggcgcg ctccccctgc
     1501 tcgaagccgc tcttctcgcc gtcggaaaac ccccggcagt aggcgtcctg ttcgaggtcc
     1561 acccgcgacg gctccggcaa ccgggccccg cgcggcttcg acgaccggca cgcggcggcg
     1621 gggccgcccg gcgacagcct ccggaaagcg ggcggggtgg cgtcgcgccc ctcgcagcgc
     1681 tccgcggcgg tgccggcgat cctggggaag cagtatccgg gtggggtggc ggggggtgtg
     1741 ctcacgatag tcgcgccttg tcaggagacg atctgctccc cgcgccgccc gctgatgatc
     1801 acctcgcctt tcgcctccat ctcctgaatg atggcggtga tggcctgctg ggcgtcggag
     1861 acttccttca tgcgcaccgg gccgagggtt tccatctcct cccgcagcat ttccgaagcg
     1921 cgctcggaca tgttcttgaa gaccttctgc ttgacctctt cggaggccgc cttcagcgcg
     1981 acggagagct ccttggtctc cacccgccgc agcagcttct ggaatccccg gtcgtcgacg
     2041 agcaccaggt cctcgaaaac gaacatcttc tgcttgatct gggccgccag ctccgcgttg
     2101 gcctcctcga tttcgttcag gatcagctcg ctcgatatct catcggcctg gttgagaatc
     2161 tccgccaggc ggtccacccc cccgccgatg ctggccaccg aggtcttctt gttcttcagg
     2221 atctccttga aaacgtcgtt gacctcgtcg accatcgcac cgatcacttt ctccatgccg
     2281 gcgatgcgca atgccacgtc ggtcttgatc tcgtcgggca tcttggagat gacttcgctc
     2341 gccgccgcgg tcttgagatg gatcaggacg atggccatgg tctgggggtg ttcgtccttg
     2401 atcagctcgt agatgtcgtc gggggaaagc gacttgagcg cgtccagccc ctcgaccccc
     2461 ttgccgtccg aatcgccgcg cgccgacggg gccggcagcg cgagagcgcc ggacttggac
     2521 cgctgggcca tgagggtgaa ttcctgggcg acctgatcga ccagctccgg cgccggggtc
     2581 ccgatctggt tcaggtgccg gttgaccagt tcgcgctctt cggcggtcag ccggctgatg
     2641 atcccggcgg ccgagcgctc ccccatcgag cggatgagga tcgccgcctt gagagagccg
     2701 gacagtgatt gcgtatccat gggcatcgtg gtcattcgcg cgccggggcg ccctacttat
     2761 ccttcagcca gttgcgcatc accccgaccg aggcgtcgct gtcgctggcg accatcatcg
     2821 cggcctggtt cagcgagggc aaacgcttga cgccggccat gtcgtgctcg atctcgccga
     2881 ccgtccgggg cagctgcttg acgag
//
LOCUS       DATIFF010000695         1369 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_88988, whole genome shotgun sequence.
ACCESSION   DATIFF010000695 DATIFF010000000
VERSION     DATIFF010000695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1369
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88988"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..695)
                     /locus_tag="VLD58_10285"
     CDS             complement(<1..695)
                     /locus_tag="VLD58_10285"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016888 - endodeoxyribonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HSB54736.1"
                     /translation="MDEFPNTVNLLGAHVSAQGGVHTAPARARAIGATALQLFTKTPN
                     QWREPVIATPICEAFRENMKAAGVQVAVAHDSYLINLASPDSTLSRRSVKSFTAELRR
                     CESLGLTYLVSHPGNYMDQRERGLARNAARYAECLAAVPGPVMVLLETTAGTGTALGS
                     AFEELAALRQSIPEPERSRVGFCADTCHLYSAGYDLARDFDGVWDAWDRIIGLAHLRC
                     LHLNDSRTPFHSGR"
     gene            767..>1369
                     /locus_tag="VLD58_10290"
     CDS             767..>1369
                     /locus_tag="VLD58_10290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54737.1"
                     /translation="MTDVLPSRRVLLLGDAGARPAGLERALARGGYHPVEPEGEGLEH
                     PPATPPDLVLISASHADERLGRALAALTGEAWRAIPRVVLLSDRDAEGAARALTMGAD
                     DAMVAPVHLPELIARLVARLRHGPEDSEHHAAAWRQELMFDILEELSTGLRSDAIVET
                     LVRRVGLALELSRCSFLLAAPGERYGRVIAVLEHPGTRDLR"
BASE COUNT          198 a          458 c          500 g          213 t
ORIGIN      
        1 cggccggagt ggaacggggt tcgggaatca ttgaggtgca ggcagcggag atgggcgagg
       61 ccgatgatcc ggtcccaggc gtcccacacg ccgtcgaagt ctcgcgcgag gtcatagccg
      121 gcggagtaca ggtggcaggt atcggcgcag aacccgacgc gggaccgctc gggctccggg
      181 atggactgcc gcagcgcggc cagttcctcg aaggcactcc cgagtgccgt gccggtgccg
      241 gcggtggtct cgagcagcac catgaccggc ccgggcacgg cggcgaggca ttccgcatag
      301 cgggcggcgt tccgggcgag accgcgctcc ctctggtcca tgtagttgcc cggatgcgac
      361 accagatagg tcaggccgag gctttcacac cgcctcagtt cggcagtgaa agacttgacg
      421 gagcggcgac ttagggtgct gtccggggag gccagattga tcaggtacga atcgtgcgcc
      481 actgcgactt gcaccccggc cgccttcatg ttctcgcgga acgcctcaca aatcggggtg
      541 gcgatgacgg gctcgcgcca ctggttggga gtcttggtga agagttggag cgcggtcgcg
      601 ccgatcgccc gggcccgggc cggagcggtg tgaaccccgc cctgggcgga gacgtgtgca
      661 cccagcaggt tgaccgtgtt ggggaactcg tccatgtccg ctctttcctt gacaggccct
      721 gcggaccggg tacgttcccg gccgccacgc gggaatcccg atcatcgtga ctgacgtctt
      781 gccctctcgc cgagtccttc ttctgggcga cgctggcgcc cggccagcgg ggctggagcg
      841 ggccctggcg cgaggcggct atcacccagt ggagccggaa ggcgagggac tggagcaccc
      901 tccggcgact cccccggacc tcgtcctcat ctccgcctcc cacgccgacg agcggctggg
      961 ccgggccctg gccgcgctca ccggcgaggc gtggcgcgcg atcccgcggg tggtgctgct
     1021 atctgaccgg gacgcagaag gcgcggcacg tgcgctcacc atgggggcgg acgatgcaat
     1081 ggtggcgccg gttcatctcc ccgagctcat cgccagactg gtggcacgcc ttcgccacgg
     1141 gccggaggac agcgagcatc acgccgcggc gtggcggcag gagctgatgt tcgacatcct
     1201 cgaggagctg tcgacagggc tccggtcgga tgcgatcgtc gagacgctgg tgcgccgggt
     1261 cggactcgcg ctggaactct cgcgctgctc cttcctcctc gcggcacccg gcgagcgcta
     1321 cggccgcgtg atcgcggtcc tggagcaccc cggcacccgg gacctccgg
//
LOCUS       DATIFF010000696         4789 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2241915, whole genome shotgun sequence.
ACCESSION   DATIFF010000696 DATIFF010000000
VERSION     DATIFF010000696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4789)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4789)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4789
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2241915"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..405)
                     /locus_tag="VLD58_10295"
     CDS             complement(43..405)
                     /locus_tag="VLD58_10295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54738.1"
                     /translation="MRQDSGYPRSSTRRPRRGWTVALLLTFIAVQPWATCPVLCLTQG
                     HAVATSAHHHHHDPPCHDGSQLRNERPSFAATGDMIAAAWTPSAAPLIRGIIPIGPAT
                     FGRPQPDLSADPPPPRRA"
     gene            complement(460..3189)
                     /locus_tag="VLD58_10300"
     CDS             complement(460..3189)
                     /locus_tag="VLD58_10300"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB54739.1"
                     /translation="MSDAIDRLRPALADRYTLERELGQGGMATVYLAQDRKHDRKVAI
                     KVLRAELAAVIGAERFLREIKTIANLQHPHILGLIDSGEALVEGQGSRVEGQPSKFVY
                     YVMPFVEGESLRDRLTREKQLPIADAVRLASEVAAALDYAHRHGVIHRDIKPENVLLH
                     DGSALVADFGIALAVSTAGSTRMTETGMSLGTPHYMSPEQAMGEREITARSDVYALGA
                     MTYEMLVGEPPFTGPTAQAIIAKVMTGEPASLTGQRKSVPPAVEDAVLTALSKLPADR
                     FGSAAEFAEALNGRPGAATVSRRAVTTPASRRTLGIVSTIATLAVLAAAALAVKVWRP
                     APLPVTRLTLDLPDLRVNHTGYYGAAFAIARDGSRIAFISRIGGGGVGLGGITHLMVR
                     DRWDLQPRPIGGTDGADGPFFSPDGQWIGYIADGKVYKVAAAGGAQPVQLADGANPIL
                     AGGAWLEDGRVVFSSPSFALMAVPSTGGATTMLVRPPDNGGMIFPTALPRKDVLLVTR
                     CGNNCAQQVLMAANLKTQALDTILRGASRAFYLPNGFLVAALQDGSVVGAPFDVGALK
                     FKRAPTALLSGVQSELTIIPEIAVADDGTMLYLPSSQTAGRATPAEVDRSGKGRVLDP
                     SWLGRFNSMTLSPDGRQVAVSIAEGTGGMLWVKQLDAGPLTRVTFDGTINYRGTWMAD
                     GRTLSFSSDMHGPQTHLFRVRADGSDKPEQLFPTDTSQIDEAAWSQDGQWVAYRTGTI
                     AGVRDLYARRLQGDTTRLTIAAGPADEYMPAFSPDGKWIAYVSLESGREEVYVRPFPD
                     VTRARWQVSPSGGTSPVWAHSGRELFYLAPGDSLVSAAVTGTPDFQVISRRALFSTLP
                     YVFQPWHQAFGVRPGDRTFVMLQRSSSQGPETRRLTVVLNWFTEIQAKQNQAP"
     gene            complement(3186..4526)
                     /locus_tag="VLD58_10305"
     CDS             complement(3186..4526)
                     /locus_tag="VLD58_10305"
                     /inference="COORDINATES: protein motif:HMM:NF013300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-fucosidase"
                     /protein_id="HSB54740.1"
                     /translation="MTLSRRAFVQSMTAAAGATQLWPGLRVVPPVSTDMTWWREARFG
                     MFIHWGLYSILGGEWGGRTDYAEWIRNNAHIPLREYDKLVARFNPVRFDADQWLSIAM
                     DAGVGYLTITTKHHDGFALFDSKLTDFCIRSTPFKRDIMREIAAACRRHGVRPCWYHS
                     IMDWHHPDYLPRRAWEAETRSAAGAKYARFIPYLHGQVRELLTNYGDIGVMWFDGQWE
                     ESWTQEMGKALYRHCKALQPNVIVNNRVNGWSPVPVTELGDFRTPEQEVPATGWPGVD
                     WESCITMNRNWGYNSHDHDFKSVDQLIGLLVETASKGGNLLLNVGPKPDGTFPDESVE
                     RLRAMGAWMKVNGEAIRGTTASPFAEAPFRATSKPNRLYLFLGQWPAGALLVPGLRTP
                     VQQATLLADPSHQPLPCSSSDAGVTITLPATSPPSPWPVLCLEFDRTPEVVNHS"
     gene            complement(4523..>4789)
                     /locus_tag="VLD58_10310"
     CDS             complement(4523..>4789)
                     /locus_tag="VLD58_10310"
                     /inference="COORDINATES: protein motif:HMM:NF019844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0070064 - proline-rich region binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HSB54741.1"
                     /translation="PAPAARTPPPTRPAPVAGRSSGRRYATTWINVRSARNNRAPVLR
                     VLKPGEAVSIDSLDQGWYQVVTADQVQGYADWRLLSDAPPAPGP"
BASE COUNT          743 a         1560 c         1725 g          761 t
ORIGIN      
        1 cggggccgtt gcgagatcac caacgattgt cgtggaaagg cgtcaggccc gtcgaggagg
       61 cggtgggtcg gcggagagat cgggttgtgg ccggccgaaa gttgccgggc cgatggggat
      121 gattccgcgg atgagcggcg cggcactcgg cgtccaggcc gccgcaatca tgtcgccggt
      181 ggcggcgaag gaaggccgct cgttgcgaag ctgggagccg tcgtgacacg gcgggtcatg
      241 atggtgatga tgggccgacg tggcaacggc atgaccctgc gtcagacata gaaccgggca
      301 ggtggcccac ggctggaccg cgatgaaggt cagcagcagt gcgaccgtcc agccccgtct
      361 ggggcggcgt gtgctggaac gcgggtaccc ggaatcctgc cgcatcgggg agaaactagc
      421 cgcccggcag gggccgcgac aggagcggcc gcgcgttggt cagggagcct gattctgctt
      481 cgcctggatc tccgtgaacc agttgagcac cacggtcagc cggcgggtct cgggaccctg
      541 ggaggaggag cgctggagca tgacgaaggt ccggtccccg ggacggacac cgaaggcctg
      601 gtgccacggc tggaacacat aggggagagt gctgaagagc gccctccggc tgatcacctg
      661 aaagtcgggc gtaccggtga cggccgccga taccagggaa tcacccggcg cgagatagaa
      721 cagttcccgc cctgaatgag cccagaccgg ggaggtgccg cccgacggcg acacctgcca
      781 ccgggcccgg gtgacgtcgg ggaagggccg cacgtagacc tcctcgcggc ccgactcgag
      841 cgagacgtag gcaatccact ttccgtccgg cgaaaacgcc ggcatgtact cgtccgccgg
      901 cccagcggcg atggtgagac gggtggtgtc gccctgaagc cgccgggcgt agaggtcgcg
      961 caccccggcg atggtgccgg tgcggtacgc cacccactgg ccgtcctggg accaggcagc
     1021 ttcgtcaatc tgcgacgtat cggtggggaa gagctgctcc ggcttgtcac tgccgtcggc
     1081 acggacccgg aagagatggg tctgcggacc gtgcatgtcg gagctgaagc tgagggtgcg
     1141 gccgtccgcc atccacgtgc cgcggtagtt gatcgtgccg tcgaacgtga ctcgggtgag
     1201 cggcccggca tcgagttgct tgacccagag catgccgcct gtcccctctg cgatgctcac
     1261 cgccacctgc cgcccgtcgg gcgagagggt catgctgttg aagcgcccca gccaggaggg
     1321 atccagcact cttcccttgc cgctccggtc cacttcggcg ggggtggcgc ggccggccgt
     1381 ctggctggag gggaggtaca gcatggtgcc gtcgtctgcc acggcgattt cggggatgat
     1441 cgtgagctcg ctctgtactc cgctcaggag cgcggtcggc gcccgcttga acttgagggc
     1501 tcccacgtcg aacggcgcgc ccaccacgct cccgtcctgg agcgccgcta cgaggaagcc
     1561 gttcggcaga tagaacgcgc gcgacgcgcc ccgcaggatc gtgtcgaggg cctgagtctt
     1621 cagattggcg gccatcagga cctgctgggc gcagttgttc ccgcagcggg tcaccagcag
     1681 gacatccttc cgcggcagtg ctgtcgggaa gatcatgccg ccgttgtccg ggggccggac
     1741 cagcatcgtg gtcgccccac cggtcgaggg cacagccatc aaggcaaaac tcgggctgct
     1801 gaagacgacc cgcccatcct cgagccaggc gcctccggcc agtatcgggt tcgcgccatc
     1861 ggccagttgc accggctggg ctcctccggc cgccgcaacc ttgtagacct tgccgtcggc
     1921 gatgtacccg atccactggc catcgggcga gaagaatggg ccgtccgcgc catcggtccc
     1981 gccgatcggg cggggttgga gatcccagcg gtccctgacc atcaggtggg tgatcccgcc
     2041 gagcccgact ccaccaccac cgatacggct gatgaacgcg atccgcgagc cgtcgcgagc
     2101 gatcgcgaag gccgcgccgt agtacccggt gtggttcacc cggagatcgg ggagatcgag
     2161 cgtgagccgg gtgaccggaa gcggcgccgg ccgccagacc ttcaccgcga gcgccgcggc
     2221 cgcgagcacc gccagcgtgg cgatggtgct cacgatgccc agcgttctcc ggctcgcggg
     2281 agtcgtgacg gcccgccggc tgacggtggc cgctcctggc cggccgttaa gagcctcggc
     2341 gaactccgcc gcgctgccga agcggtcggc cgggagcttg gagagcgccg tgaggaccgc
     2401 gtcttccacc gccggaggca cgctcttccg ctggccggtg agcgaggccg gctctcccgt
     2461 catgaccttg gcgatgatcg cctgggccgt gggaccggtg aacggcggct cgcccaccag
     2521 catctcgtag gtcatcgcgc caagggcgta gacatcggag cgtgccgtga tctcacgctc
     2581 ccccatagcc tgctcgggcg acatgtagtg cggcgtgccg agcgacatcc cggtctccgt
     2641 catccgggtg ctgcccgcgg tgctcaccgc cagcgcgatg ccgaaatcgg ccaccagcgc
     2701 cgagccgtcg tggagcagca cgttctcggg cttgatgtcg cgatggatga cgccgtggcg
     2761 gtgggcgtag tcgagggccg cggcgacctc gctggcgagc cgcaccgcgt cggcgatggg
     2821 gagctgcttc tcgcgggtga gccggtcgcg gagcgattcg ccttcgacga atggcatcac
     2881 gtagtacaca aacttcgagg gttggccttc gacccttgac ccttgaccct cgaccaacgc
     2941 ttcacccgag tcgatcagcc ccagtatgtg cgggtgctgc aggttggcga tcgtcttgat
     3001 ctcccgcagg aaccgctcgg ccccgatgac cgccgccagc tcggcccgga gcaccttgat
     3061 ggccaccttg cggtcatgct tgcgatcctg ggcgaggtag accgtcgcca tcccgccttg
     3121 tcccagctcc cgctccaggg tgtagcggtc ggcgagggcc ggacgcagcc ggtcgatggc
     3181 atcactcatg aatggtttac tacctctggc gtacgatcga actcgagaca cagcaccggc
     3241 cagggtgacg ggggcgaggt tgcgggcagg gtgatggtga cgcccgcgtc gctcgagctg
     3301 cagggaagtg gctggtgcga tggatcggcg aggagcgtgg cctgctgcac cggtgtccgg
     3361 agtccgggaa ccagcagtgc gcccgcgggc cactggccca ggaagagata caggcggttc
     3421 ggcttcgagg tggcccggaa cggcgcttcc gcgaacggtg aggcggtggt tccccggatc
     3481 gcttcgccgt tcaccttcat ccaggcgccc atggcgcgga gccgctccac gctctcatcg
     3541 gggaaggtgc cgtccggctt cggccccacg ttgaggagca ggttcccgcc cttcgatgcc
     3601 gtctccacca gcagcccgat caactggtcg accgacttga aatcatgatc gtggctgttg
     3661 tagccccagt tcctgttcat cgtgatgcag gactcccagt ccactccggg ccatccggtc
     3721 gcgggcacct cctgctcggg cgtgcggaaa tcgcccagct ccgtcaccgg caccggtgac
     3781 cagccgttca cccggttgtt gacgatcacg ttcggctgga gcgccttgca gtgccggtag
     3841 agcgccttcc ccatctcctg ggtccagctc tcctcccact ggccgtcgaa ccacatcacg
     3901 ccgatgtcgc cgtagttggt gaggagttcc cgcacctggc cgtggaggta gggaatgaag
     3961 cgggcgtact tcgcgccggc ggccgagcgg gtttcagcct cccatgcgcg gcggggcagg
     4021 tagtcgggat ggtgccagtc catgatggag tggtaccagc agggccgcac cccatggcga
     4081 cggcaggcgg cggcgatctc ccgcatgatg tcgcgcttga agggggtcga ccggatgcag
     4141 aagtcggtga gcttcgagtc gaagagggcg aagccgtcgt gatgcttggt ggtgatggtg
     4201 aggtagccca ctccggcatc catcgcgatc gagagccact ggtcggcgtc gaatcgcacc
     4261 ggattgaacc gggcgaccag cttgtcgtat tcgcggagcg ggatatgggc gttgttgcgg
     4321 atccactcgg cgtagtcggt gcggccgccc cactcgccgc cgaggatgga gtagagcccc
     4381 cagtggatga acatcccgaa gcgggcctcg cgccaccagg tcatgtccgt ggacacgggg
     4441 ggcaccaccc ggaggccggg ccacagctga gtggcgccgg ccgccgcggt catcgattgc
     4501 acgaaggcgc ggcgggagag cgtcaaggtc ccggggccgg aggcgcgtcg ctcaggagcc
     4561 tccagtcggc gtagccctgg acctgatcgg cggtgaccac ctggtaccag ccctggtcga
     4621 gcgagtcgat gctgacggct tcgccgggct tgagcacccg caacaccggc gcgcgattgt
     4681 tccgggcgga ccggacgttg atccaggtgg tggcgtacct gcggccgctg gagcgccccg
     4741 ccacgggagc ggggcgggtg gggggagggg tcctggcggc aggcgcagg
//
LOCUS       DATIFF010000697         5240 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_856900, whole genome shotgun sequence.
ACCESSION   DATIFF010000697 DATIFF010000000
VERSION     DATIFF010000697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5240
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_856900"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..577
                     /locus_tag="VLD58_10315"
     CDS             <1..577
                     /locus_tag="VLD58_10315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HSB54742.1"
                     /translation="VGTFSFFPSKNLGAWGDGGLIVTQEQALAERLRRLRTHGGAKQY
                     HHDEVGYNSRLDTLQAAILLAKLPHLAGWTAGRQRVAQRYSEAFAGHPAVRAPVVDRM
                     NDHIYHQYTIRAERRDELAAYLKANGIGSAIYYPLGLHLQPCFAYLGYRAGSLPETEA
                     ACRTVLSLPVFPELTNAQQDVVIAAIRQFYG"
     gene            615..1925
                     /locus_tag="VLD58_10320"
     CDS             615..1925
                     /locus_tag="VLD58_10320"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HSB54743.1"
                     /translation="MRVAVIGSGYVGLVTGACLAETGNDVVCADIDIKKVERLQNKDV
                     PIYEPGLDQLIHRNTEEGRLTFTADIGASVDKARVVFIAVGTPANEDGSADLQHVLSV
                     AKSIGSHIRPDTIVATKSTVPVGTAEKVRAAVLEGGCKVAFSICSNPEFLKQGAAIED
                     FMKPDRIVVGVENDAAREVMAELYAPFVRTGNPVLFMDVPSAEVTKYAANAMLATRIS
                     FMNAVALFCERVGADVNHVRKGIGTDRRIGSAFLFPGPGYGGSCFPKDVKALIKSASE
                     TGLNFDLLEAVERTNERQKLVLLEKLKTAFNGNLQGKTIAVWGLAFKAETDDMRMSPS
                     IPLIEGLLKAGARIQAHDPKAMDTARAIFGDKVIYAHDPYSAVNGADALAIVTEWLPY
                     RNPDFERLKSLLKQPLIVDGRNLYDPARMKAQGFAYSAIGRRPA"
     gene            1922..2857
                     /locus_tag="VLD58_10325"
     CDS             1922..2857
                     /locus_tag="VLD58_10325"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronic acid decarboxylase family
                     protein"
                     /protein_id="HSB54744.1"
                     /translation="MRVLITGAAGFLGSHLADRFLAEGHDVIGMDNLITGSRDNIAHL
                     AGNRRFLFVLHDVSRFIQVDGPLDAVLHFASPASPIDYLELPIQTLKVGSLGTHNALG
                     LAKAKGARFLLASTSEVYGDPQVHPQPESYWGHVNPVGPRGVYDEAKRFAEAMTMAYH
                     RYHGLDTRIVRIFNTFGPRMRAHDGRVVSNFVVQALKGEPLTVYGDGQQTRSFCYVTD
                     LIEGIYRLFESDEVDPVNVGNPDEFTVRQLADLVLRLTGSKAAIELRPLPEDDPKVRQ
                     PDIGRAQALLGWSPKVPLEEGLGHTIEFFRRLSPA"
     gene            2920..3627
                     /locus_tag="VLD58_10330"
     CDS             2920..3627
                     /locus_tag="VLD58_10330"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSB54745.1"
                     /translation="MRISDEPLINQARERFALQDYYGAIHLLQEITEAGRSFADCHHL
                     LGLSYAMLGQAHRALEHFGKALELNPRYIEAHIHRGILLNDLGRTEEAAEAFRLASSH
                     NTAQSSGFPAHVAANLANHHAQLGAAYAESGAIAEAIAQYRRAVELGPNFADLRYKLA
                     RVLLETGDVLSAREELERVVADRPNFVDALASLGLARFLSGDAAGAQQVWHECLLARP
                     KNARVEAYLSMLERAAE"
     gene            3624..4517
                     /locus_tag="VLD58_10335"
     CDS             3624..4517
                     /locus_tag="VLD58_10335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54746.1"
                     /translation="MKPWVCLLLLAAACGGSASDHELLGDAAYTDGDFATAFREYQAA
                     SRNRDAAQVWAKLGAAGLKAGELREAAAAYQKLAAADKTRASEAARGLEQVAAAAARD
                     GGEVPLREAIEALRRLAPERVSPRHTMALVKSAKLEPAEAAAMGPLALAAASDAAVTD
                     QMLVQYGDALQATTACSDAIDVFQVALRRSRDAVIRTRATRGIGDCGLQLGREALLVD
                     RPEIATQWFTRVLAVDSTTDRGRLALVGLGDARMAQGDLLGATIVFQDAMKADPNDSV
                     SALAGQRLAKLGASAGNADSQ"
     gene            4528..>5240
                     /gene="bamD"
                     /locus_tag="VLD58_10340"
     CDS             4528..>5240
                     /gene="bamD"
                     /locus_tag="VLD58_10340"
                     /inference="COORDINATES: protein motif:HMM:TIGR03302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0065003 - protein-containing complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HSB54747.1"
                     /translation="MIGWRQAGAVVSFVALGSIGCGRGAKPFTAPAPTPISATATPEE
                     VQALWARASREYSRGRWSKAATLFERVTLEVPPGDTLATAAHFRLAECYFGQRQQLQA
                     AREFRKVSDDAPTSHLAPEALLRAGDAYADLWRRPELDPTYGQTSLATYQELLNRYPD
                     APAAARARMRIADLEEMFARKDFKTATYYYRLKAYDSAILYLKDIAASYPRASITPDV
                     LLTLVHAYQKVNYAEDVTET"
BASE COUNT          869 a         1784 c         1747 g          840 t
ORIGIN      
        1 ggtcggcacc ttctcgttct tcccgagcaa gaacctggga gcgtggggcg acggcggact
       61 gatcgtgacc caggaacagg ccctggccga gcggctccgg cgcctgcgga cccatggcgg
      121 tgccaagcaa taccatcacg atgaggtggg gtacaacagc cggctcgata ccctgcaggc
      181 cgcgatcctg ctcgcgaagc tgccgcacct cgccggctgg acggcgggca ggcagcgcgt
      241 ggcgcagcgc tacagtgagg cgttcgcggg acaccccgcg gtgcgcgccc cggtggtcga
      301 tcgcatgaat gaccacatct atcaccagta caccatccgg gccgagcggc gtgacgagct
      361 ggcggcctat ctcaaggcga atgggatcgg ctccgccatc tactaccccc ttggtcttca
      421 tcttcagccc tgcttcgcct atctgggcta ccgggccggc tccctccccg aaacggaggc
      481 ggcctgccgc acggtactgt ccttgccggt attccctgag ctgacgaacg cacaacagga
      541 cgtcgtcatc gccgcgatcc gccagttcta cggatgatgc tggcagcggc ttttttcctt
      601 gtggaggtgg tctcgtgaga gttgcggtga tcgggagtgg atacgtcggt ctggtgaccg
      661 gcgcgtgcct ggcggaaacc ggcaatgacg tggtctgcgc cgatatcgat atcaagaagg
      721 tcgagcggct ccagaacaag gatgtgccga tctacgaacc gggactcgac cagctgattc
      781 atcgcaacac ggaagagggc cggctcacct tcacggccga tatcggcgcc tcggtcgaca
      841 aggcccgggt ggtgttcatt gccgtcggca ccccggccaa tgaagacggc tcggcggatc
      901 tgcagcacgt cctctcggtg gccaagtcga tcggcagcca cattcgcccc gacaccatcg
      961 tggccaccaa gtccaccgtg ccggtcggca ccgcggagaa ggtccgggcc gcggtcctcg
     1021 agggtgggtg caaggtggcc ttcagcatct gctccaatcc cgagttcctg aagcagggcg
     1081 ctgcgatcga ggacttcatg aagcccgacc ggatcgtcgt cggggtggag aacgatgccg
     1141 cccgcgaagt catggccgag ctgtacgcgc ccttcgtgcg gaccggcaac ccggtgctct
     1201 tcatggacgt gccgtcggcc gaggtgacga agtacgcggc caacgccatg ctcgccaccc
     1261 ggatctcgtt catgaacgcg gtggcgctct tctgcgagcg ggtcggcgcc gacgtgaatc
     1321 acgtccgcaa aggcatcggc accgaccgcc ggatcgggtc ggcattcctc ttccccggcc
     1381 cgggctatgg cggctcctgc ttccccaagg atgtgaaggc gctgatcaag agcgccagcg
     1441 agaccgggct caacttcgac ctgctggaag cggtggagcg gaccaacgag cggcagaagc
     1501 tggtgctgct ggagaagctc aagacggcct tcaacggcaa tctccagggc aagacgatcg
     1561 cggtctgggg tctcgccttc aaggcggaga ccgacgacat gcgcatgagc ccgtcgattc
     1621 cgctgatcga agggctgctc aaggccggcg cccggatcca ggcccacgac ccgaaggcga
     1681 tggacaccgc ccgcgccatt ttcggtgaca aggtgatcta cgcccacgac ccctacagcg
     1741 cggtgaacgg ggccgacgcg ctcgcgatcg tgaccgagtg gctgccctac cggaaccccg
     1801 acttcgaacg gctcaagtcg ctgctcaagc agcccctgat cgtcgacggc cggaacctct
     1861 acgatccggc ccggatgaag gcccaggggt tcgcctattc cgcgatcgga aggcgacctg
     1921 cgtgagggtg ctgattaccg gggccgccgg gtttctcggc tcacacctgg cagaccggtt
     1981 cctcgcggaa ggacacgacg tgatcgggat ggacaacctg atcacgggca gccgggacaa
     2041 catcgcgcat ctcgccggca accgccgctt cctgttcgtg ctgcacgacg tcagccgctt
     2101 catccaggtg gatgggccgc tcgacgcggt gctgcacttc gcctcgcccg cgagtccgat
     2161 cgactatctc gagctcccga tccagaccct caaggtcggg tcgctcggca ctcataacgc
     2221 gctggggctc gccaaggcca agggcgcccg cttcctgctc gcctctacct ccgaggtgta
     2281 tggcgacccc caggtccatc cccagccgga gagctactgg ggacacgtga acccggtggg
     2341 gccccgcggg gtctacgacg aggccaagcg cttcgccgag gccatgacca tggcctatca
     2401 ccgctaccac gggctcgaca cccggatcgt ccggatcttc aataccttcg gaccccggat
     2461 gcgggcccac gacggtcggg tggtttcgaa tttcgtggtc caggcgctca agggtgagcc
     2521 gctcaccgtc tacggcgacg gccagcagac ccgctcgttc tgctacgtga ccgacctgat
     2581 cgaggggatc taccggctgt tcgagagcga cgaagtcgac ccggtgaatg tcggcaatcc
     2641 ggacgagttc accgtccgcc agctggcgga cctggtgctc cggctgaccg gttcgaaggc
     2701 ggcgatcgaa ctccggccgc tgccggagga cgatcccaag gtccgccagc cggacatagg
     2761 cagggcccag gcccttctgg gctggagccc gaaggtgccg ctggaggagg ggcttggcca
     2821 caccatcgaa ttctttcgcc ggctgtcacc ggcctgaccc tcgcgagcct atattgttgg
     2881 cgtcccagca ccggacattt tccctgattc ggggagccca tgcgcatcag tgacgagccg
     2941 ttgatcaacc aggcgcggga gcggttcgcg ctgcaggact actacggcgc gatccacctg
     3001 ttgcaggaaa tcacggaagc gggccggagc ttcgccgact gccatcacct gctcggcttg
     3061 agctacgcca tgctgggcca ggcgcaccgg gccctggagc atttcggaaa ggcgctggag
     3121 ctgaaccccc ggtatatcga ggcgcacatc cacaggggaa tcctgctcaa cgacctcggg
     3181 cgcacggagg aggcggccga ggcgttccgg ctggcgtcgt cccacaatac cgcccagtcc
     3241 tcgggcttcc cggcgcacgt ggccgccaac ctggccaatc accatgccca gctcggcgcg
     3301 gcctacgccg agtcgggcgc gattgcggag gccatcgccc aataccgccg ggcggtggag
     3361 ttgggaccga atttcgcgga cctgcgctac aagctcgccc gggtgctgct cgagaccggg
     3421 gacgtgctgt ccgcccggga ggagctggag cgggtggtag ccgaccgccc caacttcgtg
     3481 gatgcgctgg cctcgctcgg tctggcccgg ttcctgtccg gcgacgcggc cggcgcgcag
     3541 caggtgtggc atgaatgcct gctcgctcgt ccaaagaatg cccgggtgga agcgtatctc
     3601 tcgatgctgg agcgcgccgc cgagtgaagc cctgggtctg cctgctcctg ctggccgcgg
     3661 cgtgtggcgg ttccgcctcg gaccacgaac tgctgggcga tgcggcctac accgatggcg
     3721 acttcgccac cgcgttccgg gaataccagg ccgcctcccg caaccgcgac gcggcccagg
     3781 tctgggccaa gctcggggcg gcaggactca aggcgggtga gctccgcgag gcggcggccg
     3841 cctaccagaa gcttgcggcg gccgacaaga cccgcgcctc ggaagccgcg cggggactgg
     3901 aacaggtggc cgccgcggcc gcccgcgatg gcggagaggt gccgctccgg gaagccatcg
     3961 aagcattgcg tcggctcgcg ccggagcggg tgagtccccg gcataccatg gctctggtca
     4021 agagcgccaa gctcgagccg gccgaagccg cggccatggg accgctggcc cttgccgcgg
     4081 ccagcgatgc tgccgtgacg gaccagatgc tggtgcagta cggcgacgcc ttgcaggcca
     4141 ccaccgcctg cagcgatgcg atcgacgtct ttcaggtggc gctccgccgg agccgcgacg
     4201 ccgtgatccg gactcgcgct acccggggca ttggtgactg tgggctccag cttggccgcg
     4261 aggcgctgtt ggtggaccgt cccgagatcg ccactcagtg gtttacccgg gtactcgccg
     4321 tcgacagcac caccgaccgc ggtcgcctcg ccctcgtggg tctgggcgat gcccggatgg
     4381 cgcagggcga cctgctgggc gcgacgatcg tctttcagga tgcgatgaag gcggatccca
     4441 acgattcagt ttcggcgctc gcgggccagc gtctggccaa gctgggcgcc tcggcgggaa
     4501 acgccgattc acagtgagcg agggtgcatg atcggctgga gacaggctgg ggcagtggta
     4561 agcttcgtgg cgctcggcag catcggttgt gggaggggcg ccaagccctt caccgcgcct
     4621 gcgccgacgc cgatctcggc gacggccacc cccgaggagg ttcaggcgct ctgggccagg
     4681 gccagccggg agtactcccg ggggcgctgg agcaaggccg ctaccctgtt cgaacgcgtg
     4741 acgctcgaag tcccgccggg tgacaccctt gccaccgcgg cccacttccg tctcgctgaa
     4801 tgctacttcg gccagaggca gcagctccag gcggcccgcg aattccggaa ggtgtcggat
     4861 gatgcgccga cctcccatct cgcgcccgaa gcgctgctcc gggccggcga tgcctatgcc
     4921 gacctctggc gccggccgga gctcgatccg acctacggcc agacctcgct cgcgacctac
     4981 caggaactgt tgaaccgcta tcccgacgct cctgccgcgg cccgggcgcg gatgcggatc
     5041 gccgacctgg aggagatgtt cgcccgcaag gacttcaaga ccgccaccta ctactaccgc
     5101 ctcaaggcgt acgactccgc gattctctat ctcaaggaca tcgccgcgtc gtacccgcgc
     5161 gcctccatca cccccgatgt gctgctgacc ctggtgcacg cctaccagaa ggtgaattac
     5221 gccgaagacg tgaccgagac
//
LOCUS       DATIFF010000698         2678 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_244160, whole genome shotgun sequence.
ACCESSION   DATIFF010000698 DATIFF010000000
VERSION     DATIFF010000698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2678
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_244160"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..586
                     /locus_tag="VLD58_10345"
     CDS             <1..586
                     /locus_tag="VLD58_10345"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSB54748.1"
                     /translation="VTGYWSDGTSAPLPGATLSSSGGSVSGNSISWSTPGSKSITANC
                     GNGLSATASADVQQLNIVVHDSAYFNVDKTVIYRTDDQSRLRAIAQVLKDHPDIKLVI
                     DGHTDSDGSVAYNARLGMNRAAAMKAFLAKEGVAVDRMTITLRTFGECNPVAPNNTAD
                     GRSLNRRAELHEFGNTPPAEASASCKEAGRERNP"
     gene            complement(672..1589)
                     /locus_tag="VLD58_10350"
     CDS             complement(672..1589)
                     /locus_tag="VLD58_10350"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HSB54749.1"
                     /translation="MSRARAGQGAGVFWAFAAIYVVWGSTYLAIRVLVSAVPPLLASG
                     SRFLTAGSLLYAWARLRGAPAPRRESWAPAVMLGGLFFLIGNGGISWAETRLPSGLTA
                     LLAATSPLFTAVFTSARGGWHRPPFRVGLGILVGLGGVALLVAPGEFIGGAHADPVAA
                     LAITVAAMGWAAGSVVSHGLRVDPSPAIATAMKMITGGVLLLGAGLAFGEGAEVVPGR
                     ITPGTIFAWGYLIVFGSLIGFSAFTYLLRVSTPQKVSTSAYVNPLVAVFLGWALLGEA
                     VTARTLLGAAIIVGGVMLIRLREMEPGEA"
     gene            complement(1586..2578)
                     /locus_tag="VLD58_10355"
     CDS             complement(1586..2578)
                     /locus_tag="VLD58_10355"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HSB54750.1"
                     /translation="MPIFDTKKQRAALVVMLLAVGLVIAMAPYASGLLGAPVLYVVFA
                     PMHRWLARKIRPGPAAGVVILTAFLLIVLPGTWLIGMLVGQAQGVAQSLVKSPLLDRI
                     ATLRVGEFEVGPQIASIGKELIGWLGGSALGFIGTATRFTLNLLFSFFGLYYLLLNPA
                     VTWKAIQPYIPFSEANVEILRERFRSVTTATIVGTGLTAAVQGAIVGLGFLLTGIGDP
                     VFWGVVTMVFAILPVVGAGMVWGPAALSLLISGHPGRAILLVALGVVVVANVENLIRP
                     YVFKRYSEIHPMVTLVGAVVGVSYFGLLGLLIGPLALSYFFELIRMYREEYLTT"
BASE COUNT          498 a          905 c          962 g          313 t
ORIGIN      
        1 ggtgaccggc tactggagcg acgggaccag cgccccgctc cccggcgcca cgctctcctc
       61 gagcggtggc agcgtctcgg gcaactcgat cagctggagc acgccgggca gcaagagcat
      121 cacggcgaac tgcggcaacg gcctctccgc tacggcgagc gccgacgtgc agcagctcaa
      181 catcgtggtc cacgactcgg cctacttcaa cgtggacaag acggtcatct accggaccga
      241 cgaccagagc cggctccggg cgatcgccca ggtgctgaag gatcacccgg acatcaagct
      301 ggtgatcgac ggccacaccg attccgacgg ctcggtggcg tacaacgcca ggctcggcat
      361 gaaccgcgcc gccgcgatga aggcgttcct cgccaaggaa ggggtggcgg tggaccggat
      421 gacgatcacc ctgcgcacgt tcggcgagtg caacccggtg gcgccgaaca acaccgcgga
      481 cggccggtcg ctcaaccgcc gcgcggagct gcacgaattc ggcaacaccc ctccggctga
      541 agcgagcgcg agctgcaagg aggccgggcg ggagcggaat ccgtaggaag acggtaggac
      601 ggtaagacgg taggacggta ggcgggggag ctcggcggtc gccgggctcc cccgctccgc
      661 ttccccctcc ctcacgcctc ccccggctcc atctcccgga gccggatgag catgaccccg
      721 ccgacgatga tcgccgcgcc cagcagggtt cgcgcggtga ctgcctctcc gagcagcgcc
      781 catcccagga agacggcgac gagcgggttg acgtaggcgg aggtggacac cttctgcggg
      841 gtcgagaccc ggaggaggta ggtgaaggcg ctgaagccga tcaggctccc gaagacgatc
      901 aggtatcccc aggcgaagat cgtccccggg gtgatgcggc cggggacgac ttcggccccc
      961 tcgccgaacg ccagcccggc gccgaggagg agcacgcctc cggtgatcat cttcatcgcg
     1021 gtcgcgatgg cgggcgaggg atccacccgg aggccgtggg agacgacgga gccggccgcc
     1081 catcccatcg ccgccacggt gatcgccagc gcggccaccg gatcggcgtg ggcgccgccg
     1141 atgaattccc ccggcgcgac gaggagggcc accccgccca ggcccacgag gatgccgagc
     1201 cccacccgga acggaggacg gtgccacccg ccacgcgcac tggtgaagac cgccgtgaag
     1261 agcggggagg tggccgcgag gagggccgtg aggccggaag ggaggcgggt ctccgcccac
     1321 gagatgccgc cgttcccgat gagaaagaag agaccgccga gcatgaccgc cggcgcccag
     1381 ctctcccgcc tcggcgcggg ggcgccccgc agccgggccc aggcatagag gaggctcccg
     1441 gcggtgagga agcgggatcc cgaggcgagg agcggcggga cggcggaaac cagaacccgg
     1501 atcgcgaggt aggtcgagcc ccagacgacg taaatcgccg cgaaggccca gaagactccc
     1561 gccccctgcc cggcgcgggc ccggctcacg tcgtgaggta ctcctcgcgg tacatccgga
     1621 tgagctcgaa gaagtacgag agggccagcg ggccgatgag gaggccgagc agcccgaagt
     1681 agctgactcc cacgaccgcg ccgaccaggg tgaccatcgg gtggatttcg gaataccgct
     1741 tgaagacgta cggccggatc aggttctcga cgttcgccac caccacgacg cccagggcga
     1801 cgagcaggat cgcccggccc gggtgcccgc tgatgaggag cgacagggcc gccgggcccc
     1861 acaccattcc ggcgccgacc acgggaagaa tcgcgaacac catcgtcacc acgccccaga
     1921 agacgggatc gccgatgccg gtgagcagga agccgagacc cacgatggcg ccctgcaccg
     1981 cggcggtgag gccggtgccg acgatggtgg cggtggtgac ggagcggaag cgctcgcgga
     2041 ggatttcgac gttggcttcg gagaagggga tgtagggctg gatcgccttc cacgtgaccg
     2101 cgggattgag cagcaggtag tagaggccga agaaggagaa gaggagattc agggtgaagc
     2161 gggtcgccgt gccgatgaac ccgagcgcgc tcccgcccag ccagccgatc agttccttcc
     2221 cgatcgacgc gatctgggga cccacttcga actcgcccac ccggagggtc gcgatccggt
     2281 cgaggagggg actcttgacc aggctctggg ccacgccctg ggcctggccc accagcatgc
     2341 cgatgagcca ggtgcccgga agcacgatca ggagaaaggc ggtgagaatc accacaccgg
     2401 cggccggtcc cggccggatc ttccgggcca gccaccggtg catcggggcg aatacgacgt
     2461 agaggaccgg cgcgccgagg aggccgctcg cgtacggcgc catcgcgatg accagcccga
     2521 cggccagcag catgacgacc agggcggcgc gctgcttctt cgtgtcgaag atcggcatgg
     2581 ctgaagctta atccgtcacg gccagggttt ccgggtgagc ggctcgatca ccttccagac
     2641 gttccgggcc acgatccgct ggcccgccgg ggtcgggt
//
LOCUS       DATIFF010000699         2882 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_244191, whole genome shotgun sequence.
ACCESSION   DATIFF010000699 DATIFF010000000
VERSION     DATIFF010000699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2882
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_244191"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            43..612
                     /locus_tag="VLD58_10360"
     CDS             43..612
                     /locus_tag="VLD58_10360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54751.1"
                     /translation="MFVDGFRLTDGAGVDDLVSLSDVAAMEVYPGMIIPPEYAQSFGA
                     GSCGAIVLWTGRTRGHTRVRTDPPAPELTLDLTLSADTVMRRNVVEATLVLANRSDTT
                     RTVCITGSYVTLVGTGGRRDVAAKVARHPCASPVELAPRGSRSWREEVTLAPGTLLLQ
                     KRLDMRMTPCSDGPRCKRSLTSNWQLLSR"
     gene            719..1012
                     /locus_tag="VLD58_10365"
     CDS             719..1012
                     /locus_tag="VLD58_10365"
                     /inference="COORDINATES: protein motif:HMM:NF014643.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008219 - cell death [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HSB54752.1"
                     /translation="MKSESISSAKNRLSALIKRVQRGDSILITDRGVPVARLVPVQLG
                     AGVPERIIALAQHGLARLPEREPDVQWLDLPRPSLTPGPSAVDVLLEERREGR"
     gene            1009..1434
                     /locus_tag="VLD58_10370"
     CDS             1009..1434
                     /locus_tag="VLD58_10370"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HSB54753.1"
                     /translation="MRFWDSSAVLPLLVDEPGTAAMVALQVEDPAAAVWWLTPVECWS
                     ALGRLERERRLTEEGVVAAARLLAEAARRWTEVPPIDRVRDQAARLVRLHPLRAADAL
                     QLAAALVLSDFDPGTLPFVTLDDRLARAARREGFEVLGA"
     gene            1431..>2882
                     /locus_tag="VLD58_10375"
     CDS             1431..>2882
                     /locus_tag="VLD58_10375"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB54754.1"
                     /translation="MIDMARLTAALADRYRLERELGQGGMATVYLAQDLKHDRKVAVK
                     VLKPELAAVLGAERFVQEITTTAQLQHPHILQLYDSGTADGFLYYVMPYIEGETLRTK
                     LDREHQLGLDEAVRITTEVGDALDYAHRHGVIHRDIKPENILIQEGRAMLTDFGIALA
                     VKESGGNRLTETGLSLGTPQYMSPEQATGDRRLDARSDVYSLGAVLYEMLAGEPPVTG
                     PNVQAMIAKLMTERPTRLRVVRDTVPEGIDTAVAKALSKIPADRFASVSEFSRVISAS
                     RDTPGRPRWVRVAVAGGVVVAIGAVAWVARGHRPPVAEAFTPQFVQLTTDGNARSPSL
                     SPDGTRLAYVARDCAEDRCSERLVVSDTGGAGTITLMTGKSILVYGWAAQGRFLIAGP
                     DFPALGDAVAVSALGNAPRSLHGRVAFAVGTTDTVVASPGFVSLADSITWLRLVTVSD
                     GLVRDSIAIRRPALGHVGFPAPRSGRIALVSATL"
BASE COUNT          436 a          964 c         1019 g          463 t
ORIGIN      
        1 accgcttcct gcgggaagtc cacatcgcgg cgcagctagc cggtgttcgt cgacgggttc
       61 cggctgaccg atggggccgg tgtagacgat ctggtgagcc tgtccgacgt ggcggcgatg
      121 gaggtctatc cggggatgat cattcccccg gagtacgcgc agagcttcgg ggcggggtca
      181 tgcggcgcaa tcgtgctctg gacgggtagg acccgtggtc acacccgcgt ccggaccgac
      241 ccgccggcac cggagctcac gttggatctg acgctctccg ccgataccgt gatgcggcgg
      301 aacgtggtgg aggccacgct cgtcctggcc aaccgctccg acacaacccg aacggtgtgc
      361 atcaccgggt cctacgtgac cctcgtgggt acgggaggca gacgcgacgt cgccgcgaag
      421 gtcgcgcgtc atccgtgcgc cagcccggtc gagctcgccc cgcggggctc ccggtcgtgg
      481 cgggaggagg tgaccttggc cccggggacg ctgctgctgc aaaaacgtct cgacatgcga
      541 atgaccccgt gcagcgacgg tccgcgctgc aagcgcagcc taacctccaa ctggcagctc
      601 ctgtctcgtt agggcccgct cttgtccgga cgtggagcgt ggctcgtgac gggggcggat
      661 gtggcccgcc ggaataataa gtcttgtttg gacataccaa catggctatt atagccatat
      721 gaagagcgaa tccatctcca gcgccaagaa ccggctgagc gccctcatca agcgggtcca
      781 gcgcggcgac tccatcctga tcaccgatcg cggcgttccg gtggcgaggc tcgtgcccgt
      841 gcagctcggc gccggcgtgc ccgagcggat catcgcactg gcccagcatg ggctggcccg
      901 gttgcccgag cgcgagcccg atgtgcaatg gctcgacctc ccgcggccat ccctgacgcc
      961 cgggccaagc gccgtggacg tgctgctcga ggagcgtcgc gaaggacgat gagattctgg
     1021 gactcctcgg cggtgctccc cctgctggtc gacgagccgg gcacggccgc gatggtcgcg
     1081 ctccaggtcg aagacccggc cgccgcggtg tggtggctca cgccggtgga gtgctggtcc
     1141 gccctgggac ggctggagcg tgagcggcgc ctcaccgagg aaggtgtggt cgccgccgcc
     1201 cggctgttgg cggaggcggc gcggcggtgg accgaggtac cgccgatcga tcgcgtacgc
     1261 gaccaggcgg cgcgcctggt gcggctgcat ccgctccgcg cggccgacgc actgcagctg
     1321 gcggctgccc tggtcctgtc ggacttcgat cccggcaccc tgccgttcgt gacgctcgac
     1381 gatcgcctcg ccagggcggc gcggcgcgaa gggttcgagg tgctcggcgc atgatcgaca
     1441 tggcccgcct caccgccgcc cttgccgacc gctaccgcct cgagcgcgag ctggggcagg
     1501 gcgggatggc cacggtctat ctcgcccagg acctgaagca cgaccgcaag gtcgcggtga
     1561 aagtcctcaa gcccgagctg gccgcggtgc tcggtgccga gcggttcgtg caagagatca
     1621 cgaccaccgc gcagctccag catcctcata tcctccagtt gtacgattct ggaacggccg
     1681 acggcttcct ttactacgtc atgccctaca tcgagggcga gacactgcgc accaagctcg
     1741 accgcgagca ccagctcggc ctcgatgagg ccgtacgcat cacgaccgag gtgggggatg
     1801 cgctcgacta cgcgcatcgc catggcgtga tccaccggga catcaagccg gagaacatcc
     1861 tgatccagga gggcagggcg atgctgaccg acttcggcat cgccctcgct gtcaaagagt
     1921 cgggcggcaa ccggcttacc gagaccgggc tcagtctcgg gacgccgcaa tacatgagcc
     1981 cggagcaagc gacgggagac cggcggttgg atgcaaggag cgatgtgtac tccttgggtg
     2041 cggttttgta tgagatgctg gccggcgagc cgccggtgac gggccccaat gtccaggcga
     2101 tgatcgcgaa gctgatgacc gagcgaccca caaggctccg tgtggtgcgg gacaccgtgc
     2161 ctgagggaat cgacaccgcc gtcgccaaag cgctgagcaa aataccggct gaccgcttcg
     2221 catcggtcag cgagttctcg cgggtcatct cggcgtcgcg ggacaccccc gggcgtccac
     2281 gctgggtcag ggtcgcggtg gcgggcggtg ttgtggtggc gatcggggcg gtcgcgtggg
     2341 tggcgcgcgg ccaccggccg ccggtcgccg aggcgtttac cccgcaattc gtgcagctca
     2401 ccaccgacgg caacgctcgc agcccctccc tctcgcccga tggaacccgc ctggcctacg
     2461 tcgcgcgcga ctgcgcggag gaccgctgca gcgagcgtct ggtggtgagc gatacgggtg
     2521 gggcgggcac gatcaccctg atgacaggca agagtatcct ggtctatggc tgggccgcgc
     2581 agggacggtt tctcattgcg ggcccggatt tccctgccct cggggacgcg gtcgcggtgt
     2641 ctgccctggg caacgctccg cggtcgctcc acggcagagt ggccttcgcc gtgggcacca
     2701 cggacacggt cgtggcgagc ccgggattcg tctcgctggc ggacagcatt acctggctgc
     2761 ggctcgtcac cgtcagcgac ggcctggtgc gggacagcat cgcgatccgg cgcccggcgc
     2821 tcggtcatgt cgggtttccg gctccgcgta gtggccgcat cgccctggtc agcgcgaccc
     2881 tg
//
LOCUS       DATIFF010000700         1392 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_244299, whole genome shotgun sequence.
ACCESSION   DATIFF010000700 DATIFF010000000
VERSION     DATIFF010000700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1392
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_244299"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            551..>1392
                     /locus_tag="VLD58_10380"
     CDS             551..>1392
                     /locus_tag="VLD58_10380"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSB54755.1"
                     /translation="MFVDKGCGTCHRVRGVGDGTIGPDLAGLRASRSLFDLGAAMWNH
                     LSQMGAAMRDTGTQPPRLTPLEFSSLAAFLFTTQYDGTSGDPVKGSRLFTAKSCAQCH
                     AVGGRGGSVGPPLGGLKRSSSPVLMAAAMWNHGPRMAEAMNARGLTWPTFRGTELADL
                     AAYIATGAQTQGGETAPIVPGTPERGEQLFVDRGCAACHPVGAGTSPTPAPRLATQAH
                     RVSAGEFAGLMWNHGARMWAAMRQRGLTVPLLTGQEMADITAYLYTAYYFESAAGRAG
                     RGREL"
BASE COUNT          198 a          517 c          464 g          213 t
ORIGIN      
        1 cggctgcagg cacatgacca ccaactgggt gtgcttgccg gtgaacagta cccgccggaa
       61 gtaggtgttc ttcagggtct cgcgctcgat cgctccgacg tagccggtca tggtggcacc
      121 ctcctcgtgt cccgagcctg catggccccg cttcctgtgg agccggtgag acagctgtgg
      181 ccaacctgcc ccagaaggtg tcccacggtg tcccggagat cgacgtcgtc cccggcgaca
      241 agcgctcgaa cactcatgcc tttgtctctc cgctcctcat tccgtcggtt tccctgggca
      301 agaggcatac cagttcagct caccgctctc agccctcctc ccctcggctt tgacacctcg
      361 cgatcggtgt ggcagtatcg cccccctggc cgccatgcgg agagccacag tgcaagggcg
      421 cggagcgaac ggactccgaa acctcaccgc gtgcgggctc gccgcgctga cggtgcttct
      481 tcccaccgcg gcgcgaccgc aggctcccgg atcggtcccc gccgagtgga caacggtccc
      541 gggctggaac gtgttcgtcg acaagggctg cggcacctgc caccgggtgc gcggcgtcgg
      601 cgacggcacc atcgggccgg acctggccgg ccttcgagcg agccggagcc tcttcgatct
      661 gggggccgcc atgtggaacc atctgtccca gatgggggcg gcgatgcgcg acacggggac
      721 ccagccccca cgcctcacac cgctcgagtt ctccagcctg gccgcgttcc tcttcacgac
      781 ccagtacgac gggacctcgg gggacccggt caagggatcg cgtctcttca cggccaagag
      841 ctgcgcgcag tgccacgcgg tgggcggccg gggcggcagc gtgggccctc ctctcggcgg
      901 gctcaagcgg tccagctcgc cggtcctcat ggccgccgcc atgtggaacc acggcccccg
      961 gatggccgag gcgatgaacg cccgcgggct cacctggccc accttccggg ggacggagct
     1021 ggccgacctc gcggcctaca tcgccacggg agcgcagacc cagggcgggg aaaccgcgcc
     1081 gatcgtcccg ggcacgcccg agcgtggcga gcagctcttc gtggaccggg gctgcgccgc
     1141 gtgccacccc gttggcgccg ggacgagccc gaccccggct ccgcgcctgg ccacccaggc
     1201 tcatcgcgtg agcgccggtg agttcgccgg tctcatgtgg aaccacggcg cgaggatgtg
     1261 ggccgccatg cgacagcgtg gcctcaccgt gcctctgctc acgggtcagg agatggccga
     1321 catcacggcc tacctctaca ccgcgtacta cttcgagtcc gccgccggcc gggccggacg
     1381 cggtcgagag ct
//
LOCUS       DATIFF010000701         1449 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1474322, whole genome shotgun sequence.
ACCESSION   DATIFF010000701 DATIFF010000000
VERSION     DATIFF010000701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1449
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1474322"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..517)
                     /locus_tag="VLD58_10385"
     CDS             complement(<1..517)
                     /locus_tag="VLD58_10385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54756.1"
                     /translation="MRSPRPLVILLLAALAGPGCVAAQRGQGALEPLPPAGYGSMTQN
                     SLALRIRTDEIEVRLVPLDQRVTRLLAADSYRSLQGLVESRRAAIDSIATRAGISSPG
                     LALVTFFGQQAGIRFDPQTVSLLIRNRFLRPLGIVPFSPRFNSQQLDVREQVTAIYLF
                     EEELPVGDSFSF"
     gene            complement(514..1137)
                     /gene="yihA"
                     /locus_tag="VLD58_10390"
     CDS             complement(514..1137)
                     /gene="yihA"
                     /locus_tag="VLD58_10390"
                     /inference="COORDINATES: protein motif:HMM:TIGR03598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HSB54757.1"
                     /translation="MTERRQALPPSPLRELPVEFVGSFPDPLVRLAPVLPEVALIGRS
                     NVGKSSLLNALVGRPGLARVSGTPGKTTLLNAFRLPGLYLIDLPGYGFARAGKAARAG
                     YRSLVTRYLRERDTLAGVVWLLDVRHPPSREDLDMQTLLIESGRPVLAVLTKADKLTR
                     SALAARVREIATALGLHDDQVQLTSSTSGLGMAELGQSILAASGGSR"
     gene            complement(1134..>1449)
                     /locus_tag="VLD58_10395"
     CDS             complement(1134..>1449)
                     /locus_tag="VLD58_10395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HSB54758.1"
                     /translation="EEALMRILVEPKNALTKQYKKLFELEDVGLTFDAESLRAVAVKA
                     LKRGTGARGLRSILETMMTDIMFDLPNRDDVREIVVTKEAITEGIPPLIVTERARTKR
                     EA"
BASE COUNT          216 a          497 c          530 g          206 t
ORIGIN      
        1 cgaagctgaa cgaatcaccc accggcagct cctcctcgaa caggtagatc gcggtcacct
       61 gctcccgcac gtcgagctgc tgggagttga agcgcggcga gaagggcacg atgccgagcg
      121 gccggagaaa ccggttgcgg atcagcagcg acaccgtctg cgggtcgaac cggatccccg
      181 cctgctgccc gaagaaggtc accagggcca ggccggggct gctgatcccc gcccgggtgg
      241 cgatcgaatc gatggcggcg cgccggctct ccaccaggcc ctggagcgag cggtaggagt
      301 cggcggccag gagccgcgtg acccgctggt ccaggggcac caggcggacc tcgatctcgt
      361 cggtccggat ccgcagggcc agcgagttct gggtcatgga gccgtatccg gccggcggca
      421 gcggctccag ggctccctgg ccgcgctgag ccgcgacgca tccgggtccg gccagggcgg
      481 ccagcagcag gatgacgagc ggacgcggcg atctcatcgg gaccctccgg aggcggcgag
      541 gatgctctgg cccagctcgg ccatgccgag gccggaggtg ctgctggtga gctgaacctg
      601 gtcgtcgtgc aggcccagcg ccgtcgcgat ctcgcgaacc cgcgccgcca gggccgaccg
      661 ggtgagcttg tccgccttgg tgagcaccgc cagcaccggc cgcccgctct cgatcaggag
      721 ggtctgcatg tccaggtcct cacgcgaggg tgggtggcgg acgtccagca gccagaccac
      781 cccggcgagg gtgtcccgct cgcggaggta ccgggtgacc aggctccggt agcccgcccg
      841 ggcggccttg ccggctcggg cgaagccgta acccggcagg tcgatcagat acagccccgg
      901 caggcggaag gcgttgagca gggtggtctt gcccggggtg ccgctgaccc gcgccagccc
      961 tggccggccc accagggcgt tgagcaggct cgacttgccg acattggacc ggccgatcag
     1021 ggcgacttcc ggcaggaccg gcgcgagccg gaccaggggg tcgggaaagg agccgacgaa
     1081 ctcgaccggc agctcccgca gaggagacgg cggcagggcc tgccgccgtt cggtcacgcc
     1141 tcgcgcttcg tccgggcgcg ttccgtgacg atgagcggcg ggatgccctc ggtgatcgct
     1201 tccttggtga ccacgatctc ccgcacgtcg tcccggttgg gcaggtcgaa catgatgtcc
     1261 gtcatcatgg tctcgaggat cgagcggagg ccgcgggcgc cggtgccgcg cttgagcgcc
     1321 ttcacggcca ctgcccggag cgattcggcg tcgaaggtga gccccacgtc ctccagctcg
     1381 aacagcttct tgtactgctt ggtcagcgcg ttcttgggct cgaccaggat ccgcatcagc
     1441 gcttcctcg
//
LOCUS       DATIFF010000702        12363 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2089655, whole genome shotgun sequence.
ACCESSION   DATIFF010000702 DATIFF010000000
VERSION     DATIFF010000702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12363
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2089655"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..471)
                     /locus_tag="VLD58_10400"
     CDS             complement(<1..471)
                     /locus_tag="VLD58_10400"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: protein motif:HMM:NF013411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070497 -
                     6-carboxy-5,6,7,8-tetrahydropterin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HSB54759.1"
                     /translation="MRSDFKVSVSKDYLVFSSAHFITFRGHQCETLHGHNYRVGVTVE
                     GSVDNETMFVVDFSVLKKIVRKLVDEIDHKVLLPLKNPKLSFRDEGRSRHVHYFGEPT
                     YVFPQVDCAMVPIENTTAEMLAQYFAQRVKDELLAQGIKNLTAIEMEVEESFGQA"
     gene            complement(481..1341)
                     /locus_tag="VLD58_10405"
     CDS             complement(481..1341)
                     /locus_tag="VLD58_10405"
                     /inference="COORDINATES: protein motif:HMM:NF013991.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triphosphoribosyl-dephospho-CoA synthase"
                     /protein_id="HSB54760.1"
                     /translation="MTLSPADVSAYATLACLLEASAPKPGNVSPGRPFRDMAYEDFLA
                     SAVAIGPVLAQAGQRPLGETIRDALRATRRWTGANTNLGIVLLLTPLARAELAASEGT
                     LRERLGRILRATTVPDAVEVYGAIQQSGAGGLGRVEQEDLAGRPTVTLREAMALAAGR
                     DAIAAEYVSDFEFTFTTGLPTLRAARQAALSWDHVVLETFLTLLAAKPDTLIARKLGA
                     EAAEAVTRRAAEVQALGGVRTEAGLAELARFDAELRHSHNSRNPGTTADLTAAALFVA
                     LLEDGWRHER"
     gene            complement(1338..2210)
                     /locus_tag="VLD58_10410"
     CDS             complement(1338..2210)
                     /locus_tag="VLD58_10410"
                     /inference="COORDINATES: protein motif:HMM:TIGR00768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RimK family alpha-L-glutamate ligase"
                     /protein_id="HSB54761.1"
                     /translation="MHVAILSSTTGWHIDELTRAVRARGLEPLVLPWEGNVSPVGHGG
                     GVTNAGHTLAGVRAVLPRIIPSGSLEQIIYRVDTLHRLEEDGIRVMNTARAIERTVDK
                     SWTSAILARGGLPTPETIVCEQPDDAFAAWRALGGDVIVKPLFGSMGLGMSRVSDEDL
                     AWRVFRVVETVRGIYYIQRFIPHEGRDIRAFVVGGKVLGAMERTAPGWRTNFSRGGKT
                     APVELPAAWAELAVRAAALVGAEYAGVDLLPGADGKVYVLEVNGIPGWEGLQQATGID
                     VAGAVIDQLLRGTA"
     gene            complement(2258..3043)
                     /locus_tag="VLD58_10415"
     CDS             complement(2258..3043)
                     /locus_tag="VLD58_10415"
                     /inference="COORDINATES: protein motif:HMM:TIGR02118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EthD family reductase"
                     /protein_id="HSB54762.1"
                     /translation="MRRPVLLSMLGLLALAACAKPAEKPAADTAAAAPAPPPKPEPMA
                     FVTVIYNTPKSAAAFEKYYWANHVPLVGQKQAEVGFVAAELTKFDATLDGKKPTYYRQ
                     AVLWFKNMADLEKGIATPGFKAIGDDLPKFATGGLIALIGEETGDHMEPLTGDTTAFV
                     TVIYNQPKDAAAFESYYAATHVPLVGQGASEIAFTRAELSKFAKNLDGSPASLYRQAK
                     LYFPNEAALKTGTGTAAFKAVGDDLPKFADGGLTALVGHITTK"
     gene            complement(3161..4120)
                     /gene="mch"
                     /locus_tag="VLD58_10420"
     CDS             complement(3161..4120)
                     /gene="mch"
                     /locus_tag="VLD58_10420"
                     /EC_number="3.5.4.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR03120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018759 - methenyltetrahydromethanopterin
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methenyltetrahydromethanopterin cyclohydrolase"
                     /protein_id="HSB54763.1"
                     /translation="MSTLNMNERARDIADVMVEEATGLRIAVHSLPGGARVIDAGVNV
                     DGGLNAGLLLSEICMGGLGDVEYTTVALGGENWPAVQVRTDHPAIACMASQYAGWAVQ
                     VDKYFAMGSGPLRAHARVEKELFEKLHYAEQATCGVLVMEGRQLPTDEVAAYVARKAS
                     LSPGQLTFLIAPTASLAGGTQISARILETGLHKMETLGFDVRHVVSGIGTAPIPTIAK
                     NDLRGIGRTNDCILYGGQAHYIVRASDTALADLASKLPASASKDYGTPFYEIFEQYDK
                     DFYKIDPLLFSPAEVWLTSATSGKTHHAGLVNTDVLRKSLYPE"
     gene            complement(4396..5217)
                     /locus_tag="VLD58_10425"
     CDS             complement(4396..5217)
                     /locus_tag="VLD58_10425"
                     /EC_number="1.2.7.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR03122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018493 - formylmethanofuran dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0015948 - methanogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran dehydrogenase subunit C"
                     /protein_id="HSB54764.1"
                     /translation="MSALVLTLRSRPAQRVDLGPLTTASLAGRSLSDIAGLALPSGNR
                     ALKLGEVFEVAGTPGGEIEIRNSCDQLDRVGAGLTEGRLTVRGDAGAYLGAKLAGGTI
                     VVNGSTGAWTGSGMTSGLIQVTGNAGDFLGGAVPGDHQGMKGGTVVVGGNAGARAGDR
                     MRRGALLIEGNAGDYVASRMVAGTIAVWGTVGAFPGLAMRRGTLLLRQAPTELLPTFN
                     DCGQYPLNFLTLLARSWRGLPGKFATLPDGGYQVRRFMGDLANGGRGEVLVWAKG"
     gene            complement(5214..6113)
                     /gene="fhcD"
                     /locus_tag="VLD58_10430"
     CDS             complement(5214..6113)
                     /gene="fhcD"
                     /locus_tag="VLD58_10430"
                     /EC_number="2.3.1.101"
                     /inference="COORDINATES: protein motif:HMM:TIGR03119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran--tetrahydromethanopterin
                     N-formyltransferase"
                     /protein_id="HSB54765.1"
                     /translation="MILNGVAIDDEFAEAFGMKATRILITAQNLTWAYNAANTATGFA
                     TSVIACGCEAGVERELTPAETPDGRPGVSILIFAVSGKELAKQIERRIGQCVLTSPTS
                     AAFAGISGGEPVALGQNLRFFGDGFQSSKLIGGRRYWRVPVMDGEFLVEETTSVVPGV
                     GGGNFLILAETQPQALAASEAAIAAMKKVPNVIMPFPGGVVRSGSKVGSRYKALSAST
                     NDAYCPTIRGITRSQLSPEIGSVMEIVIDGLTPADISASMKAGIQAIVDLGAKAGIRR
                     ITAGNYGGKLGKFHFRLREIMAS"
     gene            complement(6110..7780)
                     /locus_tag="VLD58_10435"
     CDS             complement(6110..7780)
                     /locus_tag="VLD58_10435"
                     /EC_number="1.2.7.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR03121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran dehydrogenase subunit A"
                     /protein_id="HSB54766.1"
                     /translation="MLIKLTGGRVYDPANQADGVVRDVYLRDGRVVATPAATDRIDRE
                     FDCSGRVVMAGAIDMHTHIGGGKMNIARAMLPEDHRGDLVRRTALTRSSAGMAAPGTL
                     ATGYRYAEMGYTACFEPAILPVNARQAHLEMGDTPIVDKGGYVMLGSDDFLLRLMAKG
                     ESQKLINDYVGWTLNATRCIGIKVVNPGGISAFKFNQRRLDVDEKHPYYGVTPRDILR
                     VLSRAVYELGVPHPLHVHSSNLGLPGNADSTLVTIKASEGLPIHLTHIQFHSYGTEGD
                     RKFSSAAARIAEAINGTPNATCDVGQILFGQTVTASGDSMSQHRNSGLASPKKYVVMD
                     IECDAGCGVLPFKYRDQNFVNALQWAIGLEIFLMVNDPWRVFLTTDHPNGAPFTSYPH
                     LIRLLMDRSFRKERLDLIHPDARALSVLGTLDREYSLHEIAILTRAAPARLLGIPDIG
                     HLGNGARADVTVYRDHADREQMFRAPEYVFKDGELVVQNGKVVKVTWGRYHTVRPEYD
                     RGIEGRLADHFANYQTMRSSQLVISDDEMHAIGHGADVVVHPCRSGTR"
     gene            complement(7790..9058)
                     /locus_tag="VLD58_10440"
     CDS             complement(7790..9058)
                     /locus_tag="VLD58_10440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54767.1"
                     /translation="MPASSPLSDQISNVACPFCGLVCDDLVIGQQSGRLTVLANGCPI
                     SRPAFEQTGGAAEPRIKGRPASPADAIAEAARLLRAAHSPLISGLGTDVAGARAAASL
                     ADRIGATVDHMNSAAGMRNLMVLQDGGWIITTLSEVRNRADLLIIAGSDIAGQFPRFF
                     ERCIANQQTLFAEKRSCEIIVLGKGLPDGVALPGPKPTVIPCDPARLHEAAGVLRLLH
                     NGGMPAAASAAGVPLETWKTLAERMKAARYGVLAWAAADFAFAHAELTVQALSELIKD
                     FNRESRWSGLPLGGSEGDITADMVLLWQTGFATRTSYGQGHPEHDPYHLSGERMLARG
                     EADVLLWVSSFNPARTPPDGKIPRVVLGHPAMTFAQEPEVFIPVGIPGVDHAGHLFRT
                     DRVVALSVGRLRESSLPSTAQVLAAIESAL"
     gene            9094..10257
                     /locus_tag="VLD58_10445"
     CDS             9094..10257
                     /locus_tag="VLD58_10445"
                     /inference="COORDINATES: protein motif:HMM:NF014686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HSB54768.1"
                     /translation="MHEDRKAIELHAARAPLLVAAVSGRALAASARRGGFPVVVLDYF
                     ADRDCAASAVACRSVAAAGALRFDRRALLAAAWELIPSAQCAGVVYGSGFESRPTLLR
                     DLAAGRRLYGNRPDVIRAVKDPLRLAGLLEDLAVPHPETSVAPPANPRGWLLKRIGGA
                     GGTHVRPAGDGAPPAKSYFQRIEPGQCCSVLFLADGRRARILGWNRQWTSRAIPGVPY
                     LFGGAVGGIRLTSALTREIALAVERLVAATGLIGINGLDFVVQGRRWSALEVNPRPTA
                     TLELYDPDYPRGLMAWHLAACDGLLPEHVPAPRASRALSIVHAPGEWTPGDFAFPAWC
                     RDLPGVTASLGAGDPVCTVHASAAEPDAAVQLVERRRARLETMIARSRPTVAA"
     gene            10254..11255
                     /locus_tag="VLD58_10450"
     CDS             10254..11255
                     /locus_tag="VLD58_10450"
                     /inference="COORDINATES: protein motif:HMM:NF014686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HSB54769.1"
                     /translation="MKIFVYEFVTGGGLAGKELSPGLVHEADLMLRSVLADLGDVPGV
                     ACLTARDPRLPPIPGSDILTPLAGESPLDLYRRGIAMTEWVWPTAPESGGVLEQLSRA
                     VIDGHRNLLGSRPDAVSLTASKYATAMHLARAGIPVVPTFTVDSTELLAHDGRWVVKP
                     DDGAGADDIIVVPDHDSARTLLAARGRTHIMQPWLEGVPASLSLLCCDGKARIITCNR
                     QKIRVTDGRIVLSGIHVNGEKARAMELAPLGEEIAAAVPGLWGYVGVDLMVTARGPMV
                     LEINPRLTTSWCGLRHALGVNPAEWIVDLARTGVLPCPPFPTAGGTFHLHPEPVGVR"
     gene            11245..12288
                     /locus_tag="VLD58_10455"
     CDS             11245..12288
                     /locus_tag="VLD58_10455"
                     /inference="COORDINATES: protein motif:HMM:TIGR03123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HSB54770.1"
                     /translation="MSGDAIIGWDVGGAHLKAARLGPGGVVEAVVQVPCPLWQGMEHL
                     YQAVAQARGEVGEAPRHAVTMTGEMVDLFPSRADGVARLAHAMDEQLPGASVRFFGAE
                     SGFVDCAAAATIPNQIASANWLASAAVVAATQGTGLFVDVGSTTADLVPVRDGEVGAR
                     GHDDAERLVTGELVYTGVVRTPVMAMAERVPVAGHWVPLIPEYFATAADVHRLTGDLP
                     DCADQHPTADGGPKTVEASARRLARMIGRDLEGADLSLWQALAHWLSEAQLRRLADAA
                     DLLLSIGMLPPGTPVVGAGVGRFLAARLAAARGVKFIAFAELIGAPAQLADAVSNCAP
                     AVAVGWLGGRSEG"
BASE COUNT         1904 a         4137 c         4296 g         2026 t
ORIGIN      
        1 ggcctgcccg aaactctcct ccacttccat ctcgatcgcg gtcaggttct tgatcccctg
       61 ggccaggagc tcgtccttca cccgctgggc gaagtactgt gccagcatct cggcggtggt
      121 gttttcgatc gggaccatgg cacagtcgac ctgcgggaag acgtaggtcg gttccccgaa
      181 atagtgcacg tgccgcgagc ggccctcgtc ccggaaactc agcttgggat tcttgagggg
      241 gaggagcacc ttgtggtcga tctcgtcgac cagcttccgc acgatcttct tgagcaccga
      301 gaagtcgacc acgaacatcg tctcgttgtc gaccgagccc tcgacggtga cgccgacccg
      361 gtagttgtgc ccgtgcagcg tctcgcactg gtggccgcgg aaggtgatga agtgggccga
      421 gctgaagacc aggtagtcct tgctgacgct gaccttgaaa tcgctacgca caggggttcc
      481 tcatcgttcg tgtcgccacc cgtcctccag caatgccacg aacaacgcgg ccgcggtgag
      541 atcggcagtg gtgccgggat tgcgtgaatt gtgcgagtga cgcaactcgg cgtcaaacct
      601 ggccagctcg gcgaggccgg cctcggtgcg gaccccaccc agcgcctgca cctccgcggc
      661 ccggcgggtg acggcttccg cggcctcggc cccgagtttc cgggcgatca atgtatccgg
      721 tttcgccgcc agcagtgtga ggaaggtttc cagcaccacg tggtcccagg agagcgctgc
      781 ctggcgcgcg gccctgagcg tgggcaggcc ggtcgtgaag gtgaactcga agtcgctcac
      841 gtattcggcg gcgatcgcat cccggccggc cgccagcgcc atcgcttcgc ggagcgtcac
      901 ggtgggcctc ccggcaagat cctcttgctc cacccggccc agcccgccgg ctccagactg
      961 ctgaatggcg ccatagacct cgacggcatc cggcaccgtg gtcgcgcgaa ggatccggcc
     1021 cagccgctcc cggagcgtgc cctcgctggc cgcgagctcg gcccgcgcca gcggcgtcag
     1081 gaggagcacg atgccgagat tggtgttggc cccggtccag cgccgggtgg cgcggagggc
     1141 gtcacggatg gtctcgccta gcggccgctg gccggcctgc gccaggaccg ggccgatggc
     1201 gacggcgctg gcgagaaagt cctcgtaggc catgtcccgg aacggccgcc ccggcgaaac
     1261 gttgcccggt ttgggcgcgc tggcctcgag cagacaggcg agagtcgcat aggcggagac
     1321 gtcggcgggc gacagggtca tgcggttccc ctgagcagct gatcgatcac cgcgccggcc
     1381 acatcgatgc cggtcgcctg ctgcagtccc tcccagccgg gaatcccgtt cacctccagc
     1441 acgtacacct tgccgtcggc gccagggagt agatccacgc cggcgtattc ggccccgacc
     1501 agggccgcag cccgcaccgc gagttccgcc caggcggcag gaagctcgac cggcgcggtc
     1561 tttccgcccc gcgagaagtt ggtgcgccaa ccgggcgcag tccgctccat cgcgccgagc
     1621 accttgccac cgaccacgaa ggcacggatg tcgcggccct cgtgaggaat gaagcgctgg
     1681 atgtagtaga tgccccgcac cgtctccacc acccggaaca cccgccaggc gagatcttcg
     1741 tcgctcaccc ggctcatgcc cagtcccatc gaaccgaaga gcggcttgac gatcacgtcg
     1801 ccgccgagcg cgcgccaggc cgcaaaggca tcgtcgggct gctcgcacac gatggtctcg
     1861 ggagtcggca gcccgccccg cgcgaggatg gccgaggtcc atgacttgtc gaccgtccgc
     1921 tcgatggcgc gggcggtgtt catgacccgg atgccgtctt cctcgaggcg gtggagcgtg
     1981 tcgacccggt agatgatctg ttcgagcgag ccgctgggaa tgatgcgggg aagtactgcg
     2041 cggacgccgg cgagggtgtg accggcgttg gtgaccccgc cgccgtggcc caccggactc
     2101 acattcccct cccatggcag caccagaggc tcgaggcccc gcgcgcggac cgcgcgagtg
     2161 agctcgtcga tatgccagcc ggttgtggag gagaggattg cgacgtgcat gggagtccgg
     2221 gacccggccc cgttgggaac cgggccccga ttgccgctta cttcgtggtg atatgcccga
     2281 cgagagcggt caggccgccg tcggcgaact tgggcaggtc gtctcccacc gccttgaagg
     2341 ccgcggtgcc ggtgccggtc ttgagcgcgg cctcgttggg gaagtagagc ttggcctggc
     2401 ggtagagcga cgccggcgac ccgtcgaggt tcttggcgaa cttgctgagc tcagcccggg
     2461 tgaaggcgat ctcgctcgcg ccctggccaa ccagcggtac gtgggtcgcg gcgtagtacg
     2521 actcgaatgc ggccgcgtcc ttgggctggt tgtagatcac cgtcacgaag gcggtggtgt
     2581 cgccggtgag cggctccatg tggtcgccgg tctcttcgcc gatcagggcg atgaggccgc
     2641 cggtggcgaa cttggggagg tcgtccccga tcgccttgaa gcccggggtg gcgatcccct
     2701 tctccaggtc ggccatgttc ttgaaccaga gcaccgcctg gcggtagtag gtcggcttct
     2761 tgccgtcgag cgtggcgtcg aacttggtga gctccgccgc cacgaagccg acctcggcct
     2821 gcttctggcc gacgagcggg acgtggttgg cccagtagta tttctcgaag gccgccgcgc
     2881 tcttgggggt gttgtagatg accgtgacga aagccatcgg ctccggcttg ggcggcggcg
     2941 cgggggcagc ggcggcagta tcggcggcag gcttctcggc cggcttggcg caggccgcca
     3001 gggcaagcag cccgagcatg gacaacagaa cggggcgacg catcgaaagg gacctttgtg
     3061 aaggttggac ggatgtcagg aagcaggtgc aggaagtgag aagtgagaag tgagtgcctt
     3121 cccctgtcgc ctcgccttct cccttctccc ttctcccttc tcactccgga tagagcgact
     3181 tcctcagcac atcggtattg accagacccg catgatgggt cttccccgac gtggcgctgg
     3241 tgagccagac ctcggccggg ctgaagagca acgggtcgat cttgtagaaa tccttgtcgt
     3301 actgctcgaa gatctcgtag aacggagtgc cgtagtcctt cgaggcggag gcggggagct
     3361 tcgaggccag gtcagccagc gcggtgtcgc tcgccctgac gatgtagtgg gcctgcccgc
     3421 cgtagagaat gcagtcgttg gtccggccga tgccccgcag atcgttcttg gcgatggtgg
     3481 ggatcggcgc ggtgccgatg ccgctcacca cgtgcctcac gtcgaagccc agcgtctcca
     3541 tcttgtggag gccggtctcc aggatccggg cggaaatctg ggtgccgccg gcgagactcg
     3601 cggtcggcgc gatcagaaag gtgagctggc cgggggagag cgacgccttc cgcgcgacgt
     3661 aggcggcgac ctcatcggtg ggaagctgcc gcccttccat caccagaacg ccacaggtgg
     3721 cctgttcggc gtaatgcagc ttctcgaaga gttccttctc gacccgcgcg tgggcccgga
     3781 gcgggcccga ccccatggcg aagtacttgt cgacctggac cgcccagccg gcgtactgcg
     3841 aggccatgca cgcgatggcg gggtgatcgg tgcggacctg caccgccggc cagttctcgc
     3901 cgccgagcgc cacggtggtg tactccacgt cgcccaggcc acccatgcag atctcgctca
     3961 gcaggagacc ggcattgagg ccgccatcca cgttgacacc ggcatcgatg acacgggcgc
     4021 cgccagggag gctgtggacg gcaatccgga gaccggtggc ctcttcgacc atgacgtccg
     4081 cgatgtcgcg ggcgcgttca ttcatgttca aggtggacat atcggggcaa gaagatacag
     4141 caagattggc ggggcgacag ggtcgcgggt gacttgtaca aggaacctgc ggtcctgatc
     4201 gatgggccga gcgtggtcac ggacgtcgca gcgctgtggc cgcaagggat cggaaggatc
     4261 gctgagcggc gcacgcgctg ctcctccgcg accccgctcg cccaacacag cctttgccat
     4321 gacccgtgac tcgtgatgct cgactcacag cccccgaccc ccgaccctca gccctcagcc
     4381 cttagccctt agcccttagc ccttagccca aaccagcacc tcgccccgcc ccccgttggc
     4441 caggtcaccc atgaagcgcc ggacctggta accgccatcg ggcagggtgg cgaactttcc
     4501 cgggaggccg cgccacgagc gggccagcag cgtgaggaag ttgagggggt actggccgca
     4561 gtcattgaac gtcgggagca gctcggtggg cgcctggcgg aggagtaacg tcccgcgccg
     4621 catggcgagc ccgggaaacg cgccaaccgt tccccacacc gcgatcgtgc ccgccaccat
     4681 ccggctcgcg acgtagtcgc cggcgttgcc ctcgatcagg agcgccccgc ggcgcatccg
     4741 gtcgccggca cgggcgccgg cgttgccgcc caccaccacc gtgccgccct tcatcccctg
     4801 gtgatcgccg ggcaccgcgc cacccaggaa gtcacccgcg ttgccggtga cctgaatgag
     4861 gcctgaggtc atccccgacc cggtccaggc gccggtgctt ccgttcacca cgatcgtgcc
     4921 accggcgagc ttcgcgccca ggtaggcgcc ggcatcgccg cgaacggtga ggcgcccctc
     4981 ggtgagtccg gcgccgaccc ggtcgagctg atcgcagctg ttgcgaatct cgatctcccc
     5041 gcccggcgtt cccgccacct cgaagacctc tcccagtttg agcgcgcggt tgccgctcgg
     5101 cagcgccagg ccggcgatgt cgctcagcga tcttcccgcc agtgacgccg tcgtgagtgg
     5161 cccaaggtcg acccgctggg ccggccggct ccggagcgtg agcacgaggg cgctcatgac
     5221 gccatgatct cccgtagccg gaaatggaac ttgccgagct tgccgccata gttgccggcg
     5281 gtgatgcggc ggatgccggc cttggcgccg agatcgacga tcgcctgaat ccccgccttc
     5341 atcgaggcgg aaatgtcagc cggagtgagg ccgtcgatca cgatctccat gacggacccg
     5401 atctcggggg agagctggga cctggtgata ccgcggatgg tggggcaata ggcatcgttg
     5461 gtggaggcgc tgagcgcctt gtagcgcgag cccaccttgg aaccggaacg gaccacgccg
     5521 ccggggaagg gcatgatgac gttcggcacc ttcttcatcg cggcgatcgc ggcctcggag
     5581 gccgcgagtg cctgcggctg cgtctccgcc aggatcagga aattgccgcc cccgactccg
     5641 gggacgacgc tggtcgtctc ttccaccagg aactcgccgt ccatcaccgg cactcgccag
     5701 tagcgccgcc cgccgatcag tttcgagctc tggaacccgt cgccgaagaa gcgcaggttc
     5761 tgccccagcg ccactggctc tccgccggaa atcccggcaa aggccgcgct ggtgggcgac
     5821 gtgagcacgc actgcccgat ccgccgctcg atctgcttgg ccagctcctt gcccgacacc
     5881 gcgaagatca ggatcgacac cccgggccgg ccatccggcg tctccgccgg ggtgagctcc
     5941 cgctcgacac ccgcctcgca gccacaggcg atcaccgacg tcgcgaagcc ggtggccgta
     6001 ttggccgcgt tataggccca ggtgaggttc tgcgcggtga tgagaatccg ggtggccttc
     6061 atgccgaagg cctccgcgaa ttcgtcgtcg atcgccacgc cattgagaat catcgggtcc
     6121 ccgagcggca gggatgcacc accacgtcgg ctccgtggcc gatcgcgtgc atctcgtcgt
     6181 ccgagatcac cagctgcgac gagcgcatgg tctggtagtt cgcgaagtgg tccgccagcc
     6241 ggccctcgat gccccggtca tactccgggc gcaccgtgtg ataccgcccc caggtcacct
     6301 tcaccacctt gccgttctgc accaccagct cgccatcctt gaagacgtac tccggcgccc
     6361 tgaacatctg ctcccggtcg gcgtggtccc ggtagaccgt gacatcggcc cgggcgccgt
     6421 tgccgagatg accgatgtcg ggaatgccga ggagcctggc cggagcggcg cgggtgagaa
     6481 tcgcgatctc gtggagcgag tactcccggt cgagcgtgcc cagcaccgag agtgcccgcg
     6541 cgtcgggatg gatgaggtcg agccgttcct tccggaagct ccggtccatc agcagccgga
     6601 tcaggtgcgg atagctggtg aacggcgcgc cgttgggatg atcggtggtg aggaagaccc
     6661 gccaggggtc gttcaccatg aggaagatct cgaggccgat cgcccactgg agcgcgttga
     6721 cgaagttctg gtcgcggtac ttgaatggca gcacaccgca gcccgcgtcg cactcgatat
     6781 ccatcaccac gtacttcttc ggactggcca gccccgagtt gcggtgctgg ctcatgctgt
     6841 cacccgaggc ggtgacggtc tggccgaaga ggatctgccc cacgtcgcag gtggcgttgg
     6901 gcgtgccgtt gatcgcctcc gcgatcctgg ccgcggccga ggagaacttg cggtcgccct
     6961 cggtgccgta gctgtggaac tggatgtgag tgaggtggat cggcagccct tccgacgcct
     7021 tgatggtgac cagggtcgaa tcggcgttcc ccggcaggcc gaggttgctg ctgtggacgt
     7081 ggagcggatg cggcacgccc agctcgtaga ccgcgcggga gagcacccgg agaatgtcgc
     7141 gcggcgtgac cccgtagtaa ggatgcttct cgtcgacgtc gagccgccgc tggttgaact
     7201 tgaaggcgga gatcccgccc gggttcacca ccttgatgcc gatgcagcgc gtggcgttga
     7261 gggtccaccc gacgtaatcg ttgatcagct tctggctttc gcctttggcc atgagccgga
     7321 gcaggaaatc gtcgctcccg agcatcacgt aaccgccctt gtcgacgatc ggcgtgtcgc
     7381 ccatctccag gtgcgcctgg cgggcgttga ccgggaggat cgccggctcg aagcaggcgg
     7441 tgtatcccat ctcggcgtag cggtacccgg tcgccagggt gccgggcgcg gccatgccgg
     7501 cggaggaacg ggtgagcgct gtgcgccgca ccaggtcgcc ccgatgatct tccggcagca
     7561 tcgcgcgggc gatgttcatc ttcccgccgc cgatgtgggt atgcatgtcg atcgcgcccg
     7621 ccatgaccac ccggccggaa cagtcgaact cgcggtcgat ccggtcggtc gccgccggtg
     7681 tcgccaccac ccgtccgtcg cgcagataga cgtcgcgtac caccccgtcg gcctggttcg
     7741 ccggatcgta gacccgcccg ccggtgagct tgatcagcat gggcgcactc tagagggcgg
     7801 actcgatggc ggcgagcacc tgggcggtgc tcggcaggga cgattcgcgg agccgcccca
     7861 ctgacagcgc caccacccgg tcggtccgga acaggtggcc agcgtggtcg accccgggaa
     7921 ttcccaccgg gatgaacacc tcgggctcct gcgcgaaggt cattgccgga tggcccagca
     7981 ccacgcgggg aatcttccca tctggcggtg tgcgcgcggg gttgaagctc gagacccaga
     8041 ggaggacatc cgcctcgccg cgggccagca tccgctcacc cgagaggtga tagggatcgt
     8101 gctccggatg accctggccg tagctggtgc gggtcgcgaa gccggtctgc cagaggagca
     8161 ccatgtccgc ggtgatgtcg ccctcggatc cccccagcgg caacccggac cagcgcgact
     8221 ccctgttgaa atccttgatc agctccgaca gcgcctgcac cgtgagctcg gcgtgcgcaa
     8281 aggcgaaatc ggccgcggcc caggccagca ccccatagcg cgccgccttc attcgctcgg
     8341 ccagcgtctt ccacgtctcg agcggcacac ccgccgcgct ggcagctgcc ggcatgccgc
     8401 cattgtggag caggcggagc acgccggcgg cttcatggag acgggcggga tcgcagggaa
     8461 tcacggtcgg cttgggaccc gggagagcga cgccgtccgg aaggcctttg ccgaggacga
     8521 tgatctcgca gctgcgcttt tcggcgaaga gggtctgctg gttggcgatg cagcgttcga
     8581 agaagcgggg gaattgaccg gcgatgtcgc tgccggcgat gatcagcagg tcggcccggt
     8641 tccggacctc ggagagggtg gtgatgatcc agcccccgtc ctgcagcacc atgagattcc
     8701 gcatgcctgc ggcggaattc atgtgatcga ccgtggctcc gatccggtcg gcgaggctgg
     8761 ccgcggcccg ggccccggca acgtcggtgc cgagcccgct gatcagcggc gaatgagcgg
     8821 ccctgaggag acgggcggcc tcggcgatcg cgtcggccgg gctcgcgggg cgccccttga
     8881 tgcgaggctc agcggcgccg cctgtctgct cgaatgcggg ccggctgatg gggcagccgt
     8941 tcgccagaac cgtgagacgg ccgctctgct ggccgatcac caggtcgtcg cagacgagcc
     9001 cgcagaaggg gcacgcgacg ttggagatct gatcggaaag aggagacgac gcaggcatgg
     9061 gcaagggaag ataatacctg ctaagatgtg tcaatgcatg aagatcgaaa agcaatagaa
     9121 ctccatgcag cccgggcgcc gctgctcgtc gcggcggtga gtggccgggc gctggcggcg
     9181 tcggcccggc gtgggggatt cccggtggtg gtgctggatt atttcgccga tcgggactgt
     9241 gccgcgagcg cggtcgcctg ccggtcggtc gcggcggctg gcgcgctccg cttcgaccgc
     9301 cgggccctcc tcgccgcggc ctgggagctg atcccgtcag ctcaatgcgc gggagtggtc
     9361 tacggctcgg gcttcgagag ccggcccacg ctcctccgcg acctggccgc gggccggcgc
     9421 ctctatggca atcgtcccga cgtgatccgc gcggtgaaag accccctgcg tcttgccggc
     9481 ctgctcgagg accttgccgt tccccatcca gagaccagcg ttgcgccacc cgccaatccc
     9541 cggggctggc tcctcaagcg gatcggcggc gccggcggga cccatgtgcg cccggcggga
     9601 gatggggctc ccccagccaa gagctacttc cagcggatcg agccgggaca gtgctgctcc
     9661 gttctcttcc tggccgatgg ccggcgggcc cggatcctgg gctggaaccg gcagtggacc
     9721 agtcgggcca tacccggagt gccgtacctg ttcggcggcg cggtcggagg catccggctg
     9781 acctctgccc tgacacgcga gattgccctc gcggtcgaga gactggtggc cgctaccggt
     9841 ctgatcggga tcaacggact cgactttgtg gtacagggga ggcggtggtc ggcgctcgag
     9901 gtcaatccgc ggcccaccgc cacgctcgaa ctctatgacc ccgactatcc ccgcggcctc
     9961 atggcctggc atctcgccgc gtgcgatgga ctacttcccg agcacgtccc cgcgccacgg
    10021 gcgtcgcgag cactcagcat cgttcatgcg ccaggggagt ggactccggg tgacttcgcc
    10081 tttcccgcat ggtgccggga cctccccggc gttaccgcca gcctcggggc tggagatccg
    10141 gtgtgcaccg ttcacgcgag cgccgccgag cctgatgccg cggtacagct ggttgagcgg
    10201 cgccgagccc ggctcgaaac catgatcgcg cggagccggc ccacggtggc ggcatgaaga
    10261 tcttcgtcta cgagttcgtg accggcggcg gcctggcagg caaggagctg agtccgggcc
    10321 tggtacacga ggccgatctg atgcttcgaa gcgtgctcgc tgatctgggc gacgtgccgg
    10381 gtgttgcctg cctgaccgcg cgtgacccgc gtctcccgcc tatcccaggc agcgacatcc
    10441 ttaccccgct cgcaggcgaa agcccgctcg atctctatcg gcgcggcatt gccatgacag
    10501 agtgggtctg gcccacagcc cccgagagcg gtggagtact ggaacagctc tcccgggccg
    10561 tcatcgatgg ccaccgcaat ctgctcggca gccgccccga tgcggtgagt ctgacggcca
    10621 gcaagtacgc cacggccatg cacctggccc gggccgggat cccggtggtt ccgaccttca
    10681 ccgtcgactc gaccgagctg ctggcgcacg atgggcgatg ggtcgtgaag ccggacgacg
    10741 gcgccggcgc cgacgacatc atcgtcgtcc cggaccacga cagcgcccgg acgctccttg
    10801 ccgcacgggg ccgcacgcac atcatgcagc catggctgga aggcgtcccg gcgagtctct
    10861 cgctcctttg ttgtgatgga aaggcccgaa tcatcacctg caaccggcag aagatccggg
    10921 tgacggacgg gcgtatcgtg ctcagcggga ttcacgtgaa tggcgagaag gcgcgggcca
    10981 tggagctcgc gccactcggg gaagagatcg ccgcggcggt tcccggcctc tggggctacg
    11041 tcggagtcga cctgatggtg actgcacgcg gccccatggt gctggagatc aatccgcggc
    11101 tcaccacctc gtggtgcggg ctgcggcacg cgctgggggt gaatccggcc gagtggatcg
    11161 tcgatctggc cagaaccggc gtgctgccgt gccctccctt cccgactgcg ggcggaactt
    11221 tccacctcca cccggagcct gtcggtgtcc ggtgacgcga tcattggctg ggacgtaggc
    11281 ggcgcccatc tcaaggctgc gcgcctgggc cccggtggcg tcgtggaggc agtcgtgcag
    11341 gtcccctgtc ccttgtggca ggggatggag catctctacc aggcggtggc tcaggcacgg
    11401 ggcgaggtgg gcgaagcgcc gcggcatgcc gtgacgatga cgggcgagat ggtggacctc
    11461 ttcccatcgc gcgccgacgg tgtggcccgc ctcgcgcacg cgatggatga acagctgcct
    11521 ggcgcctcgg tgcgcttctt cggcgcggag agtggtttcg tcgactgcgc cgccgccgcc
    11581 accatcccca accagattgc ctcggccaac tggctcgcga gcgccgcggt ggtggccgcg
    11641 acccagggca ccgggctctt tgtcgacgtg ggcagcacca ccgccgacct ggtgccggta
    11701 cgggacggcg aggtgggagc gcggggacac gacgacgcgg agcggctcgt cacgggggaa
    11761 ctggtgtaca ccggtgtggt gcggactccg gtgatggcga tggcggagcg ggtcccggtc
    11821 gccggtcatt gggtaccgct cattcccgaa tacttcgcca ccgcggccga cgtgcatcgc
    11881 ctgaccggcg atcttcccga ttgtgccgat cagcatccca ccgccgacgg cggtcccaag
    11941 acggtcgagg ccagcgcccg ccggctggcg cgcatgatcg gccgcgatct cgagggcgcc
    12001 gatctctcgc tctggcaggc gctggcccac tggctcagcg aggcgcagct ccgccgcctg
    12061 gccgacgcgg ccgacttgct gctgtcgatt gggatgctgc cgccgggaac gccggtggta
    12121 ggtgccgggg tgggacgatt cctggccgcg cggcttgccg ccgcccgagg ggtgaagttc
    12181 atcgcctttg cggagctgat cggagcgccc gctcagctgg ccgatgcggt gtcgaattgc
    12241 gctccggcgg tggcggtggg gtggctcggc gggaggagcg aggggtgaga agggagaagt
    12301 gagaagtaag aagtgagaag taagaaggca gaagggagag ggggaggccg cttctccctt
    12361 ctc
//
LOCUS       DATIFF010000703         1660 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2242700, whole genome shotgun sequence.
ACCESSION   DATIFF010000703 DATIFF010000000
VERSION     DATIFF010000703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2242700"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..601)
                     /gene="recA"
                     /locus_tag="VLD58_10460"
     CDS             complement(<1..601)
                     /gene="recA"
                     /locus_tag="VLD58_10460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HSB54771.1"
                     /translation="MAADESRLATDRRKALGLAISQIEKQLGKGSIMRMGAESARVKV
                     PAIPTGAINLDAATGIGGIPRGRITEIYGPESSGKTTLTLHLAANVQKMGGVAAYVDA
                     EHALDIDYAKKLGVNVEDLLVSQPDTGEQALEIVDILVRSGAVDLIVIDSVAALVPKA
                     EIEGEMGDAQMGLQARLMSQALRKLTGSISKSKTTVVFIN"
     gene            complement(738..1154)
                     /locus_tag="VLD58_10465"
     CDS             complement(738..1154)
                     /locus_tag="VLD58_10465"
                     /inference="COORDINATES: protein motif:HMM:NF014119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HSB54772.1"
                     /translation="MSRARPFVPVRQWEDRRQLRGLAGERAAIEYLTACGWQLEAHRF
                     RHGRHDLDLVLRRGRLVAFVEVKTRRSDRCGSAVESVSALKRRLVERVAVWWRLRHGR
                     PGDVYRFDLVAVTDRGGGRYEVEHLADAWRMEWSPC"
     gene            complement(1311..>1660)
                     /locus_tag="VLD58_10470"
     CDS             complement(1311..>1660)
                     /locus_tag="VLD58_10470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54773.1"
                     /translation="LGPFSHINAPIVGTDNYDFMMQGVANLVANQESANYGPNYHARS
                     DEFGRADLRQLRLNAAIAAAVTWGYATLDLSLPRQTAAQVDSLVRSTDLGDQMRSFNV
                     YQSWEAGRRGLRK"
BASE COUNT          246 a          562 c          577 g          275 t
ORIGIN      
        1 ggttgatgaa gaccacggtc gtcttcgatt tgctgatgct ccccgtcagc ttccggagcg
       61 cctgggacat cagccgcgcc tggagcccca tctgggcgtc ccccatctcc ccctcgatct
      121 cggccttggg gacgagcgcc gccaccgagt cgatcacgat gaggtcgacc gccccggagc
      181 ggaccaggat gtccacgatc tcgagcgcct gctcgccggt gtcgggctgg gagaccagga
      241 ggtcctccac gttgacgccg agcttcttgg catagtcgat gtcgagggcg tgctccgcgt
      301 cgacgtaggc cgcgactccg cccatcttct ggacgttggc ggcgagatgg agggtgaggg
      361 tggtcttgcc cgacgactcg gggccgtaga tctcggtgat gcggccccgg gggatgccgc
      421 cgatgccggt ggcggcgtcg aggttgatgg cgccggtggg aatggccggg actttgaccc
      481 gggcggactc ggcgcccatc cgcatgatgg agcccttacc gagctgcttc tcgatctggg
      541 agatggcgag cccgagggcc ttccggcggt cggttgcgag ccgggattcg tcagcggcca
      601 tgatttcctc ggatttcaat gtgactgatt ttgctacaca gtggtatgca cagcccaacc
      661 taataccgaa tatcatccga agcaagacta cttgagtgac ctgttttgag ccacagagat
      721 ccagccgacc cgtctcccta acagggactc cactccatcc gccacgcatc ggccaggtgc
      781 tccacctcgt accggccgcc cccccggtcg gtgaccgcca ccaggtcgaa ccggtagaca
      841 tcgcccggcc ggccgtgccg gagccgccac cagaccgcga cccgttcgac caaccgccgc
      901 ttgagggcgc tcaccgattc caccgctgac ccgcagcgat ccgagcggcg cgtcttgacc
      961 tcgacgaagg cgaccagccg gccccgccgc agcaccaggt cgagatcgtg ccggccgtgg
     1021 cggaaccggt gggcctcgag ctgccagccg caggcggtga ggtactcgat ggcggcgcgc
     1081 tcaccggcga ggccgcgcag ctggcgccgg tcttcccact ggcgcacggg aacgaagggc
     1141 cgggctcggg acatgaccga gcatagcggc cccgctgccg ggtgcgggac cgattcgctc
     1201 cgcgccgggc ccgatttccc ggcgagcgga cgcgtggcga gagctggtgc tgctgctcgg
     1261 ggccggggga atggaccggg cggcggcgct cgcccgggcg attctgccgg ctacttcctg
     1321 aggcctcggc gcccggcttc ccagctctgg tagacgttga acgagcgcat ctgatcgccc
     1381 aggtcggtgg agcgcaccag cgagtccacc tgggccgcgg tctgtcgcgg gagggagagg
     1441 tcgagcgtgg cgtagcccca ggtcaccgcc gccgcgatcg ccgcgttgag ccggagctgg
     1501 cgcaggtcgg cccggccgaa ctcgtcggag cgggcatggt agttcggccc gtagttggcc
     1561 gattcctggt tggccaccag gttggcgacg ccctgcatca tgaaatcgta gttgtcggtc
     1621 cccacgatcg gcgcgttgat gtggctgaac ggccccagcc
//
LOCUS       DATIFF010000704         1033 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1320394, whole genome shotgun sequence.
ACCESSION   DATIFF010000704 DATIFF010000000
VERSION     DATIFF010000704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1320394"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..>1033
                     /locus_tag="VLD58_10475"
     CDS             141..>1033
                     /locus_tag="VLD58_10475"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HSB54774.1"
                     /translation="MRLTLALLVVCATASADTRDRRLTVVEATIPELQAALRSGRITS
                     RELVLQYLARIATYEDKLNAVITVNPRALEEADALDRERQAAGKGQGKLRGPLHGIPI
                     ALKDNIHTTHLPTTGGALAFAGLVPPYEATVTRNLRDAGAIIIAKTQMTELANWVAAN
                     PGMPNNYNSLHGYGLNPYDPRRDPRDATADGRPALNTGGSSSGTGTAASFWAANVGTE
                     TSGSILSPASANMLAAVKPTVGRVSRHGIIPITADQDTAGPMARTVTDAAILLGVLEG
                     APDANDPATTRCLDATGAGARP"
BASE COUNT          184 a          386 c          335 g          128 t
ORIGIN      
        1 accacctccg cggcgatgaa gcgacgcatc gcatcgcgga tgccgaggtg cgtctcgttc
       61 cattcgatca tgcccgcatg gtatcgctcc ggcggcccgc gcggcggatc ggttcgagaa
      121 agctgctaga gtgcgccgcc atgagactga ccctcgcgct cctcgtggtg tgcgccaccg
      181 cctccgccga taccagggac cggagactca cggtggtgga ggcgacgatc cccgagctgc
      241 aggcggcatt gcgctccggc cggatcacct cgcgggagct cgtgttgcaa tacctggctc
      301 gcattgccac ctacgaggac aagctcaatg cggtgatcac cgtcaacccg cgggcgctgg
      361 aagaagccga cgccctcgat cgcgagcgcc aggcagcggg caaaggccag ggcaagcttc
      421 gcggcccgct gcacggaatc cccatagcgc tcaaggacaa catccacacc acccacctgc
      481 cgaccaccgg cggtgcgctg gccttcgccg gcctggtgcc gccctacgag gcgacggtga
      541 ccaggaacct gcgcgacgcg ggcgccatca tcatcgccaa gacccagatg accgagctgg
      601 ccaactgggt ggcagcgaac ccggggatgc ccaacaacta caattcgctc cacggctacg
      661 ggttgaaccc gtacgacccg cggcgcgacc cacgcgacgc caccgccgac gggcgcccgg
      721 cgctgaacac cggcggctcg agctccggga ccggcacggc agcgagcttc tgggcagcga
      781 acgtgggcac cgagacctcg ggctcgatcc tcagcccggc cagcgccaac atgctggcgg
      841 cggtgaagcc caccgtgggt cgcgtcagcc gccacggcat cattccgatc accgccgacc
      901 aggacaccgc cgggcccatg gccaggacgg tcaccgatgc cgcgatcctc ctcggcgttc
      961 tggaaggcgc gcccgacgcg aacgacccgg caaccacgcg ctgcctggat gcgaccggcg
     1021 ccggggcacg gcc
//
LOCUS       DATIFF010000705         1024 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1320474, whole genome shotgun sequence.
ACCESSION   DATIFF010000705 DATIFF010000000
VERSION     DATIFF010000705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1320474"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..605
                     /locus_tag="VLD58_10480"
     CDS             <1..605
                     /locus_tag="VLD58_10480"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HSB54775.1"
                     /translation="SSVSHLGFVMLGIWAATVQSIQGAIMIMIGHGLATGALFFLVGM
                     LYERRHTRDISAYGGIAKVVPVFSLLFTVVALASIGLPGLNGFVGEFLVLLGSFRDHP
                     VATGIATTGVIFAAAYLLWALQRIIYNPLDKAENETLTDLNARELAVMLPLVIGIVWL
                     GLFPGPVLQRIEPAAKRYIETVRGPMGALEVSEQSVGGPR"
     gene            605..>1024
                     /locus_tag="VLD58_10485"
     CDS             605..>1024
                     /locus_tag="VLD58_10485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54776.1"
                     /translation="MPLDLHAPLGVTLALLPEIALTAGALVVLLVNAWRHQGAGDSRL
                     SGYVALASLIPSALALALLWTGGARASGAPFMVALDTFRFASLAVILAATAGTILLSL
                     GYMEREGLLAPEYYSLVLFAAVGMMFLAGAEDLIVLFL"
BASE COUNT          130 a          358 c          346 g          190 t
ORIGIN      
        1 attcgtcggt gagccacctc ggcttcgtga tgctgggcat ctgggccgcg acggtccaga
       61 gcatccaggg cgcgatcatg atcatgatcg ggcacggact cgccaccgga gcgctcttct
      121 tcctggtcgg catgctgtac gagcggcggc acacccgcga catctcggcg tacggcggga
      181 tcgcgaaggt ggtcccggtc ttcagcctgc tgttcaccgt ggtcgccctg gcctcgatcg
      241 ggctccccgg cctcaatggg ttcgtgggtg aattcctggt gctgctgggc agcttccgcg
      301 atcacccggt cgccaccggg atcgcgacga ccggcgtgat cttcgccgcc gcctatctgc
      361 tctgggcgct gcagcggatc atctacaacc cgctggacaa ggcggaaaac gagacgctca
      421 ccgatctcaa cgcccgggaa ctggccgtca tgctgccgct ggtgatcgga atcgtctggc
      481 tgggattgtt ccccggcccg gtgctgcagc gcatcgaacc cgccgccaaa cgctacatcg
      541 agaccgtgcg cggtccgatg ggggccctcg aagtgtccga gcaatcggtg ggaggcccgc
      601 ggtgatgccg ctcgacctgc acgctccgct cggcgtcacg ctcgcgctgc tcccggaaat
      661 cgccctgacc gccggggcgc tggtcgtgct gctggtgaac gcctggcggc accagggagc
      721 cggagacagc cggctgtcgg gctacgtggc cctggcgagc ctcatcccca gcgccctcgc
      781 gctggcgctg ctgtggaccg gcggggcccg ggcgtcgggc gcgccgttca tggtggcgct
      841 ggacaccttc cggttcgcct cgctcgccgt gatcctggcc gcgaccgccg gcaccatcct
      901 gctctccctc ggctacatgg agcgggaggg tctcctggcg ccggagtatt actccctcgt
      961 gctcttcgcc gcggtcggca tgatgttcct ggccggcgcg gaggacctca tcgtgctgtt
     1021 tctc
//
LOCUS       DATIFF010000706         2291 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1320515, whole genome shotgun sequence.
ACCESSION   DATIFF010000706 DATIFF010000000
VERSION     DATIFF010000706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2291
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1320515"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1001
                     /locus_tag="VLD58_10490"
     CDS             <1..1001
                     /locus_tag="VLD58_10490"
                     /inference="COORDINATES: protein motif:HMM:NF012926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HSB54777.1"
                     /translation="RDAAFTLYALTRLGLTAETGAFIAWLARRCQASQPETLQTVYAI
                     GGEARLTERSLDHLEGYRGSRPVRIGNAAAEQLQLDIYGELLDAFYLYDKYAEVTSYD
                     LWQRIAAMVTWVSDHWDQPDDGVWEVRSGRREFLYSRILCWVAIDRGIRLARKRSLPA
                     PLPRWRAARDAIHHDIHESFWDPAAKTFVGVKGTTRLDAACLIMPLVRFISATDPRWR
                     STLQAVEARLVEDSLVSRYEIEGPETDGLEGMEGSFTICSFWYIECLSRSGDVRKARF
                     LFEKLLGYANHVGLYAEEIGPSGEHLGNFPQAFTHLALISAAYDLDRRLTSAGHPA"
     gene            complement(998..>2291)
                     /locus_tag="VLD58_10495"
     CDS             complement(998..>2291)
                     /locus_tag="VLD58_10495"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF010587.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HSB54778.1"
                     /translation="PARGPVASGEGEALPDSLGRWNRIVQDISGEHGVYVALAQLVGF
                     EGGKAFPGGSLVAGPRGDLLLRGPIFDEALLDLELDFEEITRARADLPLLADLEMRLP
                     HLLGSLHAARREKGREAEKAEGREGRRMQPEAGRPKPAAPGRTPSRSPALPPVRPSAD
                     PLAIDPELTRRWLVEFLRDELQRRRGFEKAVIGLSGGVDSSLVAFLAAEALGPANVLG
                     VRMPYRTSSMDSLAHAQLVVEALGIESLTVDISAAVDGLASAIGGPSDPARLGNIMAR
                     ARMITLFDLSAARKALPLGTGNKTERLLGYFTWHADDSPPVNLIGDLFKTQVWTLARH
                     VGVPEVIVSKPASADLIQGQTDEGDFGISYPRADAILHWILLGYRDEEVAARGYSAAE
                     IDLVRRRLDGTHWKRRLPTVAMLSATAIGEYYLRPVDY"
BASE COUNT          332 a          815 c          804 g          340 t
ORIGIN      
        1 tccgtgacgc cgccttcacg ctgtacgcac tcacccgcct cgggctgacc gccgagaccg
       61 gggcgttcat cgcgtggctg gcccgacgat gccaggcgtc ccagccggag acgctccaga
      121 ccgtctacgc catcggggga gaggcgcgcc tgaccgagcg ctcgctggat cacctcgaag
      181 gctaccgtgg gtcccgcccg gttcggatcg ggaacgcggc tgcggagcag ctccagctgg
      241 acatctacgg cgagctgctc gacgcattct acctgtacga caagtacgcg gaggtgacca
      301 gctacgatct ctggcagcgc attgccgcga tggtaacctg ggtgtcggac cactgggacc
      361 agccggacga cggagtgtgg gaggtgcgga gcggtcgccg ggagttcctg tattcgcgga
      421 tcctctgctg ggtggcgatc gaccgcggaa tccggctggc gcgcaagcgc tctctcccgg
      481 ccccgctgcc gcgctggcgg gcggcgcggg acgcgatcca ccatgacatc cacgagagct
      541 tctgggatcc tgcggcgaag accttcgtcg gggtgaaagg caccacccgg ctggacgcgg
      601 cctgcctgat catgccgctg gtgcgcttca tctcggccac cgacccgcgg tggcgctcca
      661 cgctccaggc ggtggaagcg cggctggtgg aggactcgct ggtctcccgc tacgagatcg
      721 agggccccga gaccgacggg ctggagggca tggagggcag cttcactatc tgctcgttct
      781 ggtacatcga gtgcctgtcc cgctccgggg acgtgcgcaa ggcgcgcttt ctcttcgaga
      841 agctactggg gtatgccaac cacgtgggac tctacgccga ggagatcggt ccgtcgggtg
      901 agcatctggg caactttccc caggcgttca cccacctggc cctgatcagc gcggcctacg
      961 acctcgaccg gcgcctgacc agcgcgggcc atcccgccta gtaatccacc ggccgcaggt
     1021 agtactcgcc gatggccgtg gcgctcagca tggcgacggt gggcagccgg cgcttccagt
     1081 gggtgccgtc gagccgccgg cgcaccaggt cgatctccgc cgcggagtac ccgcgcgccg
     1141 cgacctcctc gtcccggtac ccgagcagga tccagtggag gatggcgtcg gcccggggat
     1201 aggagatccc gaagtcgccc tcatcggtct ggccctgaat caggtcggcg ctggccggct
     1261 tggagacgat cacctcgggg accccgacat ggcgcgccag ggtccagacc tgggtcttga
     1321 acaggtcgcc gatcaggttg accggcgggg aatcgtcggc gtgccaggtg aagtacccca
     1381 gcagccgctc ggtcttgttc ccggtgccga gggggagcgc cttgcgcgcg gcggagaggt
     1441 cgaagagcgt gatcatccgt gcccgggcca tgatgttgcc cagccgggcc gggtcggagg
     1501 gaccaccgat ggccgaggcg agcccgtcca ccgcggcgct gatgtccacc gtcaggctct
     1561 cgatccccag tgcctcgacc accagctggg cgtgcgccag gctgtccatg ctggaggtgc
     1621 ggtacggcat ccgcacgccc aggacgttcg ccgggcccag cgcctccgcg gcgaggaacg
     1681 ccaccaggga gctgtccacc ccaccggaga gaccgatgac cgccttctcg aagccgcgcc
     1741 ggcgctggag ctcgtcacgg agaaactcca ccagccaccg ccgggtgagc tcggggtcga
     1801 tggcgagcgg gtcggcggac gggcggacag gcggtagggc gggagagcgg gacggcgtcc
     1861 gcccgggcgc ggccggcttc gggcgtccgg cctcgggttg catcctccga ccttcccgcc
     1921 cttccgcctt ctcggcctcc cgccccttct ccctccttgc cgcatgcagc gatcccagca
     1981 ggtgcggcag gcgcatctcc aggtcggcca ggagcgggag gtcggcccgg gcgcgggtga
     2041 tctcctcgaa gtcgagctcg aggtcgagca gcgcctcgtc gaagatcggg ccccggagga
     2101 gcagatcgcc ccgcgggccg gccaccagcg agccgccggg gaacgccttg ccgccctcga
     2161 acccgaccag ctgggccagc gccacgtaca ccccgtgctc gccggagatg tcctgcacga
     2221 tccggttcca gcgtcccagg ctgtcgggca gcgcctcacc ctccccgctc gccaccggcc
     2281 cccgcgccgg a
//
LOCUS       DATIFF010000707         1034 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_551121, whole genome shotgun sequence.
ACCESSION   DATIFF010000707 DATIFF010000000
VERSION     DATIFF010000707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_551121"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1034
                     /locus_tag="VLD58_10500"
     CDS             <1..>1034
                     /locus_tag="VLD58_10500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012536006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HSB54779.1"
                     /translation="EALGTSLGRNRTYAELETAMFNQSEVVWRYLTGMDSSARKDFAL
                     TGQVVYYWYDRWKAELGPGQEQISQAVLGIQHQFEAVGDSVFHLVDTGRRAQGYQLAV
                     AELRNRIQPALTALNRQIYRQQRETSVQAAFGRVEAIVATERRILVGILVATLVLGLA
                     SAWLMARGLVRPINQLRGAMAVVGSGDLDHPLQASTQDEIGDLARAFAGMTDRLRQSR
                     TEMVRLNLELAAKVAQVETTQSQLVQSEKLASLGEMAAGVAHEIRNPLGGIKMATNLL
                     SSPEVDGSPLSQEMTRSILSGISEIEGIINNLLDWARDARLERNEYELHRILDPVVEA
                     VAAEGRARGV"
BASE COUNT          176 a          338 c          371 g          149 t
ORIGIN      
        1 gaggctctgg gcaccagtct cggccggaac cgcacctacg ccgagcttga gacggcgatg
       61 ttcaaccaga gcgaggtggt ctggcgctat ctcaccggga tggattcctc cgcccgcaag
      121 gacttcgcgc tcacgggcca ggtggtgtac tactggtacg accgctggaa ggccgagctc
      181 ggcccgggcc aggagcagat ctcccaggcg gtgctcggca tccagcacca gttcgaggca
      241 gtgggcgaca gcgtcttcca cctggtcgac accggccggc gagcgcaggg gtatcagctc
      301 gccgtggccg agctgcgcaa ccggatccag ccagcgctga ccgcgctcaa ccgccagatc
      361 tatcgccagc agcgcgagac cagcgtgcag gccgcgttcg ggcgggtgga ggcgatcgtc
      421 gcaaccgagc ggcggatcct ggtgggaatc ctggtggcca cgctggtgct gggacttgcc
      481 tcggcctggc tcatggcgcg gggcctggtg cgaccgatca accagctccg cggcgcgatg
      541 gccgtggtgg gcagcggcga tctggatcat ccgctgcagg ccagcaccca ggacgagatc
      601 ggcgacctgg cccgggcctt tgcaggaatg acagaccggc tccgccaatc gcggaccgag
      661 atggtgcggc tcaacctgga gctggccgcc aaggtggccc aggtggagac gacccagtca
      721 caactggtcc agtcggagaa gctcgcctct ctcggcgaga tggcggcggg agttgcccac
      781 gagatccgca acccgctcgg ggggatcaag atggcgacga acctgctgtc ctcgcccgag
      841 gtggacggca gcccgctctc ccaggagatg acgcgctcga tcctgtccgg gatctcggag
      901 atcgagggca tcatcaacaa cctccttgac tgggcgcggg acgcgcggct cgagcgcaac
      961 gagtacgagc tccaccgcat cctagatccg gtggtggagg cggtggccgc cgaagggcgg
     1021 gcgcggggcg tcca
//
LOCUS       DATIFF010000708         1837 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_244716, whole genome shotgun sequence.
ACCESSION   DATIFF010000708 DATIFF010000000
VERSION     DATIFF010000708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1837
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_244716"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..737)
                     /locus_tag="VLD58_10505"
     CDS             complement(<1..737)
                     /locus_tag="VLD58_10505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSB54780.1"
                     /translation="MSQKPSVLVVDDESGILDTLRILLRNEGFEVTTAQGGKAGLEQI
                     RSGVHDIILSDVRMPQVSGLDILNAAREQDPMTPVILMTAQASLQTAIAAVNAGAFYY
                     IQKPFANDELVAILRRASDYRAVRVENKHLRQEIKRRDRASVSRPIGKSRRFLDTLKL
                     AEQVAPTESTVLIQGESGTGKEVVAHYIHELSQRSEGPFLSINCGALPESLLESELFG
                     HVKGAFTGALSDRPGLFAQAHRGILFL"
     gene            complement(734..>1837)
                     /locus_tag="VLD58_10510"
     CDS             complement(734..>1837)
                     /locus_tag="VLD58_10510"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB54781.1"
                     /translation="GLQRVRLEADDILRNIRSGVLTVDGLGRLAFINPTAERLLDLEA
                     EELIGHPVLDQLKSRSSELWAAVVSGIRNGRKISRGEGMVMHQKGGRMFPIGLSTTTF
                     RQEAQDAPSVTAIFTDISDLKEVQELQARAERLESVAALSASLAHEIRNPLASIRSSV
                     EQLARSRHADEDERFLAGLIVRESDRLSRLLSEFLDFARVRATQFVPLDLHAVVTAVV
                     RLIKAHPDCRPDATLTIEGSRTMLEGDEDLLHRVVANLVLNAVQVATGPARVTVSVAP
                     VTAADIPHGTNMEHAVRLQVRDSGPGIPEEIRERLFDPFVSGRPGGSGLGLAIVQRAV
                     QAHHGLVLVDSTPGTGTTFTIFLPAKMIAEDAA"
BASE COUNT          264 a          645 c          635 g          293 t
ORIGIN      
        1 tcaaggaaca agatcccgcg gtgcgcctgc gcgaacagtc cgggccggtc gctcagcgcc
       61 ccggtgaagg cgcctttcac gtggccgaac agctcgctct ccagcaggct ctcgggcagg
      121 gcgccgcagt tgatcgacag gaacggcccc tcgctccgct gggagagctc gtggatgtag
      181 tgggccacga cctccttgcc ggtgccgctc tcgccctgga tcagcacggt ggattcggtg
      241 ggtgcgacct gttccgccag cttcagggtg tcgagaaagc ggcgtgactt gccgatcggg
      301 cggctgacgc tggcgcggtc gcggcgcttg atctcctggc ggaggtgctt gttctccacc
      361 cgcaccgcgc ggtaatccga ggccctccgc agaatggcga ccagctcgtc gttggcgaac
      421 ggcttctgga tgtaatagaa ggcgccggcg ttcaccgcgg cgatcgccgt ctgcagcgag
      481 gcctgcgccg tcatcaggat gaccggcgtc atcgggtcct gctcccgggc ggcgttcagg
      541 atgtcgagtc ccgagacctg gggcatccgg acatcggaga ggatgatgtc gtggactccc
      601 gagcggatct gctccaaccc ggccttgcct ccctgcgcgg tggtgacctc gaatccctcg
      661 ttccggagca ggatacggag ggtgtcgagg atcccggact cgtcgtccac caccaggacc
      721 gagggcttct ggctcatgcg gcgtcctccg cgatcatctt ggccggcaga aagatagtga
      781 atgtggtgcc ggtgccgggg gtggagtcca ccaggaccag gccgtgatgg gcctgcaccg
      841 cgcgctgcac gatggcgagg ccgagcccgc tgccgcccgg cctccccgac acgaacgggt
      901 cgaacagccg ctcccggatc tcctccggta tcccgggacc gctgtcgcgc acctggagcc
      961 ggacggcgtg ctccatgttg gtgccgtggg ggatgtcggc cgcggtcacc ggcgccacgc
     1021 tcaccgtcac ccgggccggc ccggtagcca cctgcaccgc gttgaggacc aggttcgcca
     1081 ccacccggtg caggaggtcc tcgtccccct ccagcatggt gcgcgacccc tcgatggtga
     1141 gcgtcgcgtc gggccgacag tcgggatggg ccttgatcag gcggaccacc gcagtgacca
     1201 ccgcgtgcag atcgaggggc acgaactggg tggcccgcac ccgggcgaag tcgaggaact
     1261 cgctgagcag ccggctgagc cggtcgctct cccgcacgat cagcccggcc aggaagcgct
     1321 cgtcctcgtc ggcgtggcgg gagcgggcca gctgctccac cgagctccgg atggaggcca
     1381 gcggattccg gatctcgtgc gccagcgagg cgctgagcgc cgccaccgac tccagccgct
     1441 cggcccgggc ctgcagctcc tgcacctcct tcagatcgga gatgtcggtg aagatggcgg
     1501 tgaccgacgg ggcgtcctgg gcctcctggc gaaaggtggt ggtgctgagc ccgatgggga
     1561 acatgcgccc ccccttctgg tgcatcacca tcccctcgcc ccggctgatc ttccggccgt
     1621 tccggatccc cgacaccacc gccgcccaga gctcggacga ccggctcttg agctggtcga
     1681 gcaccgggtg gccgatcagc tcctccgcct cgaggtcgag cagtcgctcg gccgtcgggt
     1741 tgatgaacgc cagccggccc aggccgtcca ccgtcagcac cccggagcgg atgttccgca
     1801 ggatgtcgtc ggcctcgagc cggacccgct gcagccc
//
LOCUS       DATIFF010000709         2636 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_396700, whole genome shotgun sequence.
ACCESSION   DATIFF010000709 DATIFF010000000
VERSION     DATIFF010000709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2636
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_396700"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1092)
                     /locus_tag="VLD58_10515"
     CDS             complement(<1..1092)
                     /locus_tag="VLD58_10515"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HSB54782.1"
                     /translation="MATMALPARPAVLSREEVYRFRYLIAFAVVSASVLELVDTSIVN
                     VAIPHMMGNLGATLDEIAWVSTGYIVANVIILPLTSWLSDRFGRRNYYTGSIILFTAA
                     SFLCGNAHTLEELVGARVLQGIGGGALISTAQAILFDVFPLHERGKAMAIFGMGVMVG
                     PTLGPTLGGWITDNYSWPWIFYINLPLGILAAMMTWRFVPEPFHANERNDHVDWTGLL
                     LLIAGIGSLQIMLERGESKGWFDATEIRVEAIVAAMSLVAFAWHELTTDHPVVDLRIL
                     RNRQLASGVVFGLILGFALYASVFALPVFLQSFRGYTAWDTGKVILPGAIASAVTMAV
                     TGRITGKMDARYLIVAGVGLFAWSMWMHYH"
     gene            complement(1096..2226)
                     /locus_tag="VLD58_10520"
     CDS             complement(1096..2226)
                     /locus_tag="VLD58_10520"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HSB54783.1"
                     /translation="MTAPNTTIETPRREAPRPSAASPELTAAPARARRPLPLIILGVV
                     VLTLAIVGVRKLLFARNHVETDNAQVDGHITPVAPKVQAFVAEVRVEENQPVKAGDTL
                     VVLDDRDLKVRLDQVEADLAAAVAAAGSRGRSGQAVAQLAASQAQAASQEAGVISAEA
                     AARKAAADLERIRGLAAQKIVPAQQLDAAQAANDAAQANLEAARRQASAAGSVVQASG
                     AAVSGAEARLASARAALANAQLQLSYTVITAPISGVVGRRTVERGGLVQVGQPLMSII
                     PDRDVWVTANLKETDLADVAVGDSVEFTVDAYPGRHFRGHVESLSPATGARFALLPPD
                     NATGNFTKVVQRVPVRVAVDSGADQQHPLRPGMSVVVTITTR"
     gene            complement(2247..>2636)
                     /locus_tag="VLD58_10525"
     CDS             complement(2247..>2636)
                     /locus_tag="VLD58_10525"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSB54784.1"
                     /translation="ALQVALSIPLLDGFRRPARQQESSARLDAQRLRLHDIEQSVSVE
                     TRQAVLDRASAEHQVSLAGDRLRLAEQELSQARERFVAGVAGSVETTNAQGGLVAARD
                     GLIQARVNAAVARVSVRRALGVLDQTP"
BASE COUNT          419 a          931 c          886 g          400 t
ORIGIN      
        1 gtggtagtgc atccacatcg accaggcgaa gagcccgacc cccgcgacga tgagatagcg
       61 cgcgtccatc ttgccggtta ttcgcccggt caccgccatg gtcaccgcac tggcgatggc
      121 accaggcagg atcaccttgc cggtgtccca cgcggtataa ccccggaagc tctggaggaa
      181 caccggcagc gcgaacacgc tggcgtagag cgcgaagccg aggatcaggc cgaagaccac
      241 gccggaggcg agctgccggt tccggagaat ccggagatcc accaccgggt ggtcggtcgt
      301 cagctcatgc caggcgaacg cgaccagcga catcgcggcg acgatggcct cgacccggat
      361 ctcggtcgcg tcgaaccagc ccttgctctc tccccgttcc agcatgatct gaagcgatcc
      421 gattcccgcg atgagcagca ggagcccggt ccagtccacg tgatcgttcc gctcgttggc
      481 atggaacggc tcgggaacga accgccaggt catcatcgcc gccaggatgc cgagcggcag
      541 gttgatgtag aagatccagg gccaggaata gttgtcggtg atccatccgc cgagggtagg
      601 acccagcgtc ggacccacca tcacgcccat gccgaagatc gccatcgcct tgccccgctc
      661 gtggagggga aagacgtcaa acaggatcgc ctgcgcggtc gagatgagcg ccccgccacc
      721 aatcccctgg agcacccggg ccccgaccag ttcttcaagc gtgtgagcgt tgccgcacag
      781 gaaggacgcg gccgtgaaga ggatgatcga accggtgtag tagttccgcc ggccgaaccg
      841 gtcggagagc cagctggtga gcggcaggat gatgacgttc gccacgatgt acccggtgct
      901 gacccacgcg atctcatcca gcgtggcgcc caggtttccc atcatgtgcg ggatcgccac
      961 gttgacgatg ctggtatcca ccagctccag cacgctggcg gagaccaccg cgaaggcgat
     1021 gaggtaccgg aaacggtaca cctcctcgcg ggagagaaca gccggccggg ccggcaatgc
     1081 catcgtcgcc atggtctacc gcgtggtgat ggtcaccacc acggacatgc cgggccggag
     1141 cgggtgctgc tggtccgctc ccgagtccac cgcgacccgc accggtaccc gctgcaccac
     1201 cttggtgaag ttgccggtcg cgttgtcggg cggcagaagc gcgaagcgcg cgccggtggc
     1261 cgggctcagg ctctccacgt ggccgcggaa gtgccggccg ggataggcgt ccactgtgaa
     1321 ctcgaccgag tcacccaccg cgacatcggc gagatcggtt tccttgagat tggccgtcac
     1381 ccagacgtcc ctgtcgggga tgatcgacat cagcggctgt cccacctgca ccagcccgcc
     1441 ccgctccacg gtccggcggc cgaccacgcc gctgatcggc gcggtgatga cggtgtacga
     1501 cagctggagc tgggcattcg ccagcgccgc gcgggcgctc gcgagccgcg cctcggcgcc
     1561 actcacggcg gcgccggatg cctggaccac gcttcccgct gccgaggcct gacgccttgc
     1621 tgcctcgaga ttggcctggg ccgcgtcatt cgccgcctgg gccgcgtcga gctgctgcgc
     1681 cggcacgatc ttctgggccg cgagtcccct gatccgctcg aggtctgccg ccgctttccg
     1741 ggctgcagcc tcggccgaga tcacgccggc ttcctgggac gccgcctgcg cctgactggc
     1801 ggcgagctgc gccaccgcct gaccgctccg tccccggctc ccggcggccg cgacggccgc
     1861 ggcgaggtcg gcctcgacct gatccagccg gaccttgagg tcgcggtcat ccagcaccac
     1921 cagggtgtct cccgccttca cgggctgatt ctcttccacc cgcacctcgg ccacgaacgc
     1981 ctgaaccttt ggggcgaccg gcgtgatgtg cccgtccacc tgggcgttgt cggtctccac
     2041 gtgattgcgg gcgaagagga gcttgcgcac gcccacgatc gccagggtca gcaccacgac
     2101 cccgaggatg atgaggggga gcgggcgacg ggccctggcc ggcgcggcag tcagctcggg
     2161 gctggccgcg gacggacgag gcgcctcgcg acgcggggtc tcgatggtgg tgttcggagc
     2221 ggtcattgtc ttctcctctg ccgtcgttac ggcgtctggt cgagcacgcc cagggcgcgg
     2281 cggacactga cccgcgccac ggcggcattc actcgggcct ggatgagccc gtcgcgcgcg
     2341 gcgacgagac caccctgggc attagtcgtt tcgacactgc cggctactcc tgccacgaac
     2401 cgttcccgcg cctgcgacaa ctcctgttcc gccagccgca gccggtcgcc cgcgagcgac
     2461 acctggtgct cggcggaggc gcggtccagc accgcctgcc gggtctcgac agagactgac
     2521 tgctcgatgt cgtgcagccg gagccgctgg gcgtcgagcc gggccgaact ctcctgctgc
     2581 cgcgctgggc ggcggaagcc gtcgagcagc ggaatcgaga gggccacctg cagcgc
//
LOCUS       DATIFF010000710         1104 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1167593, whole genome shotgun sequence.
ACCESSION   DATIFF010000710 DATIFF010000000
VERSION     DATIFF010000710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1167593"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1104
                     /locus_tag="VLD58_10530"
     CDS             <1..>1104
                     /locus_tag="VLD58_10530"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSB54785.1"
                     /translation="RDQPEEKEEQRSAFRRFVGLLTEEDHQLKLTPSGFVWDHAAIAA
                     APGELEALYTHLRSHGIGEIRLPVGLMSSTLISLLRLLAAPGGTYGSFDHLIARLDAA
                     GCGVIQVHPIPPAEIAPQLDPRMRPPAGADKEGRLTALGPGALTEAQVGMMHFVSLES
                     GAVNPTMEVMSQLSGADSATTAEALTQLLAAGEMASKQGEWKEVCQAAYGLIELEKKA
                     PKEEHRGYGIALRRILPRSNLEKVARLTAHGNLKTEATAVLRRMGADGTEVLLHLMVN
                     SEEMNERRHYFSALKEMTEGGKLLVHMLSHDQWYVVRNVADLCGELREERAVHSLARH
                     VHHEDERVRRSVARALARIGGSGAAEPLRRALR"
BASE COUNT          179 a          364 c          403 g          158 t
ORIGIN      
        1 tccgcgatca gccggaggag aaggaagagc agcggagcgc gttccggcgc ttcgtgggtc
       61 tcctcacgga ggaagaccac cagctcaagc tgaccccttc gggcttcgtc tgggaccacg
      121 ccgcgattgc cgcggcgccg ggtgagctcg aggcgctgta cacccacctg cggtcccacg
      181 ggatcggtga gatccgcctg ccggtggggc tgatgagctc cactctgatt tccctgctcc
      241 ggctcctggc cgctccgggc gggacctacg gctccttcga ccatctgatt gcccggctcg
      301 atgccgcggg atgtggcgtg atccaggtgc atccgattcc gccggcagag atcgccccgc
      361 agctcgaccc gcggatgcgt ccccccgccg gggccgacaa ggagggccgg ctcacggccc
      421 tcgggcccgg ggccctgacc gaggcccaag tcgggatgat gcacttcgtc tcgctagaga
      481 gcggcgcggt gaacccgacg atggaggtga tgagccagct ctccggggcc gactccgcca
      541 ccaccgccga ggcgctgacc cagctgctcg ccgccggcga gatggcctcg aagcaggggg
      601 agtggaagga ggtctgtcag gcggcctacg gcctgatcga gctggagaag aaggcgccca
      661 aggaagaaca ccggggatat ggcatcgcgc tccgccggat tctgccccgc tcgaacctcg
      721 agaaggtggc ccggctgacg gctcacggga acctgaagac cgaagccacc gcggtgctcc
      781 gccggatggg ggccgacggg accgaggtgc tgctccacct gatggtgaac tccgaggaga
      841 tgaacgagcg ccggcactat ttcagcgcgc tcaaggaaat gaccgagggc ggaaagctcc
      901 tggtccacat gctgagccat gaccagtggt atgtggtgcg gaacgtggcc gacctgtgcg
      961 gcgagctgcg ggaggagcgg gcggtacact cgctcgccag gcacgtgcac catgaggacg
     1021 aacgggtccg gcgctcggtg gcgcgcgccc tggcccggat cggtggttcg ggtgcggcgg
     1081 agccgctccg gcgggcgctc cgcg
//
LOCUS       DATIFF010000711         1027 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1474787, whole genome shotgun sequence.
ACCESSION   DATIFF010000711 DATIFF010000000
VERSION     DATIFF010000711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1474787"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(111..>1027)
                     /locus_tag="VLD58_10535"
     CDS             complement(111..>1027)
                     /locus_tag="VLD58_10535"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HSB54786.1"
                     /translation="HSLLLTPHSSLLTPHAMPTRRHLLRLAAGAGLAAALPEPGATAQ
                     PAVPATPPTGLRQSVCRWPFGDIPDRDFFPMVRTLGFGAVDLLSEREWPLAEAEGMIC
                     SMGMPTERRDFIRRGLNDPANHPLLLDELRRAITAARAHQVPNIIAMIGNRDGRSDEA
                     GLAACAEALDQVKGLAEQEKVTICLELLNSRVDHHDFQGDRMDFGLKLMYAVNSPRVR
                     LLYDIYHMQIMEGDVIRTIRDHGQWIAHYHTAGNPGRNELDPTQELNYPGIARAIADT
                     GFTGWIAHEFIPTRDPKAGLAEAKRICG"
BASE COUNT          154 a          300 c          403 g          170 t
ORIGIN      
        1 cgccgggggc cacggcaacc tggggacgac gttcggggac tatgtggtgg ggttcgggct
       61 gaagtagcct gcgggcgatg agtcatggcc cctggcccat ggctcgtcgc ctatccgcag
      121 atccgctttg cctccgccag ccccgccttc gggtcgcgcg tgggaatgaa ttcgtgcgcg
      181 atccagccgg tgaagccggt atcggcgatg gcccgggcga tgccgggata gttgagctcc
      241 tgggtggggt cgagctcgtt ccggccgggg ttgcccgcgg tgtgatagtg ggcgatccac
      301 tggccgtgat cgcggatggt gcggatcacg tcgccttcca tgatctgcat gtggtagatg
      361 tcgtacagca gccggacccg cggcgaattg accgcgtaca tgagcttgag cccgaagtcc
      421 atgcggtcgc cctggaagtc gtgatggtcc acccggctgt tgagcagctc gaggcagatg
      481 gtcacttttt cctgctctgc caggcccttc acctggtcca gcgcctcggc gcaggcggcg
      541 aggcccgctt cgtcgctccg gccatcacgg ttgccgatca tggcgatgat gttcgggacc
      601 tggtgcgccc gagcggcggt gatggcgcgg cggagctcat cgagcagcag cggatgattc
      661 gcgggatcgt tcaggccacg gcggatgaag tcccgccgct cggtgggcat gcccatcgag
      721 cagatcatcc cctccgcctc ggcgaggggc cattcacgct cggagagcag gtccaccgcc
      781 ccgaagccga gggtgcgaac catcgggaag aagtcgcgat cggggatgtc gccgaagggc
      841 cagcggcaga ccgactggcg gagtcccgtg ggcggggtgg cggggaccgc cggctgggcg
      901 gtggcgccag gctccggcag cgcggcggcg aggccggcgc cggcagcaag gcggaggagg
      961 tggcggcggg tgggcatcgc gtgaggagtg aggagtgagg agtgaggagt aaggagtaag
     1021 gagtgag
//
LOCUS       DATIFF010000712         1898 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1936343, whole genome shotgun sequence.
ACCESSION   DATIFF010000712 DATIFF010000000
VERSION     DATIFF010000712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1898
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1936343"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            412..>1898
                     /locus_tag="VLD58_10540"
     CDS             412..>1898
                     /locus_tag="VLD58_10540"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSB54787.1"
                     /translation="MVPRPDCWPADPALLDSFDTPALLVDAAGQIVFANAAARRSSRA
                     DRALVGTDLVTRLFKDESEQEALSAVVHRVLAGKPWKGRLEVARDDGSRHSADVSCSP
                     LWREGAVVGLLCVLHDPGIPGESERAARRLGESLTRLARVTAELAMADTVETVTKIVT
                     THTADAVGATLASLTLRESENLLRLVGLAGGREGEAQQWETFPILTRTPASDVIRSGR
                     RLVLTGAAAIAERYPDLPASNRGQRSLVCLPLRVTTRTIGAIGLSFPGLRTMDTTELE
                     FLEIMADTCAQALDRISSMNEAATQTAKLEFLADASAELASSLDYEATLARVARLAVP
                     RFADWCAIDVVEGSRLNHVAVEHVDPAKVELARALQDRYPPDPNAPGGPWGVIRTGRS
                     ELIAQISDEMLVASAVDEEQLHIARDLNLRSAMTVPLVARGKALGVLTWVSAESERLY
                     GPDDLAFAEDLARRAALAIDNAELHSQTLAAAVQLQRAVLPDAMPT"
BASE COUNT          293 a          673 c          665 g          267 t
ORIGIN      
        1 agggtctgcg gacacatgag agcgccacgg actcaacccc ctgcggcctt gtccgtggcg
       61 ttgcgtcaat agtcctacgt cgcaaggccg ccagacatgg cccagggtga ccaaaaaggg
      121 tggccaggcc gagaccccgc cactagcacc gacggccgaa gcgtcggcct ctcacccggg
      181 tgaggatgag ggcagctcac cagcccgcgc ctgccgctga cgacggtgga ttggggcggg
      241 tgcagcgagg accggttccc cccgaccgcg tcccgtgccc ctcgtgactc cggaccccgg
      301 cgcggggggt gcgccggggt gggtgcggtg ctggggcgac cccggcgcag gcacccgcac
      361 atcaggaaag tccggtcaga tgccgcaatc cctgtgatga tgacgcatgt gatggtcccc
      421 cgacccgact gttggcctgc cgacccggcg ctcctcgatt ccttcgacac ccctgccctg
      481 ctggtcgatg ctgcgggtca gatcgtcttc gcgaacgcgg ccgcccgcag gtcttcgcgg
      541 gctgaccgcg cgctcgtcgg cacggatctg gtgactcggc tcttcaagga cgagagcgag
      601 caggaggcgc tgtccgcggt ggtgcaccgg gtcctcgccg ggaagccgtg gaaagggcgg
      661 ctcgaggtgg cgcgtgacga cgggtctcgg cacagcgcag acgtcagctg ctctccgctc
      721 tggcgggaag gggccgtcgt tggcctgctc tgcgttctgc acgaccctgg gatccccggt
      781 gagagcgagc gggcggctcg ccgtctgggg gagagcctga cccggctggc cagggtcacc
      841 gccgagcttg ccatggcgga cacggtggag acggtcacca agatcgtcac cacccacacc
      901 gccgacgcgg tgggcgcgac cctggcgagc ctgacgctcc gggagagcga gaacctgctc
      961 cggctggtcg gcctcgccgg cgggcgggag ggggaggccc aacagtggga gaccttcccc
     1021 atcctcaccc gcaccccggc cagcgacgtg atccgcagcg gcagacgcct tgtcctgacc
     1081 ggagcggcgg cgatcgcgga gcggtacccc gacctgccag cctccaaccg cggacagcgc
     1141 tcgctcgtct gtctgcccct gcgggtgacg acgcgcacga tcggtgcgat cgggctgtcg
     1201 ttccccgggc tgcggaccat ggacaccacc gagctcgagt tcctcgagat catggccgac
     1261 acgtgcgccc aggcgctgga ccgcatcagc agcatgaacg aggcggccac gcagaccgcc
     1321 aagctcgagt tcctcgccga cgcgtcggcg gagctggcca gcagcctgga ctacgaggca
     1381 accctcgcca gggtggcgcg gctggctgta cccaggtttg ccgactggtg tgcgatcgat
     1441 gtggtcgagg gcagccggct caaccatgtg gccgtggagc acgtggaccc ggcgaaggtc
     1501 gagctagccc gcgccctgca ggaccgctac cccccggacc cgaatgcacc cggcggcccg
     1561 tggggtgtga tccgtaccgg ccgaagcgag ctcatcgccc agatcagcga cgagatgctc
     1621 gttgccagcg ctgtcgacga agagcagctg cacatcgccc gcgacctcaa cctccgcagc
     1681 gccatgacgg tgccgctcgt cgcccgaggc aaagcccttg gcgtgctcac ctgggtatcg
     1741 gctgagtccg agcggctcta cggtcccgac gatctcgcgt tcgcagagga cctggccagg
     1801 cgcgcggccc tcgccatcga caacgccgag ctgcacagcc agacgctggc ggcagccgta
     1861 cagctgcagc gggcggtgct gcccgacgcc atgcctac
//
LOCUS       DATIFF010000713         2548 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_705321, whole genome shotgun sequence.
ACCESSION   DATIFF010000713 DATIFF010000000
VERSION     DATIFF010000713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2548
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_705321"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1360
                     /locus_tag="VLD58_10545"
     CDS             <1..1360
                     /locus_tag="VLD58_10545"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSB54788.1"
                     /translation="AVRAAAARALNRALADSAGLNPESVMDVLLRSLSDPDAGVRIQG
                     LRSIATFHTERAVPKVLPLLDDPFNNVQVQAAEALGDMPGTGALAQLTRIATGTKGSF
                     ARRRSAFLSLAKLDSAAFAAAAPRYESSSDWRERAAAAEGWARFPSTRGRLLNDRDPR
                     VVAASVSAWSTQVTGPDTALVRTARGLLSQKDAAVRAVAADAVGRATDPRDVPALVAA
                     VRAARSDSFPEATLSALGALVAIRGASPEAERAVDQEALAALPVPADYVVKRWAEENW
                     PAAAAAWGSPYPVSTGRSLEDYRQIVRSYLIGQLPSRYPKVRIEVDQLGPMEVELFGP
                     VAPLTVANFLTLVDRRYFDGLRFHRVVPNFVAQTGDPRGDGYGGPGGAIRDEINRRRY
                     GAFVLGMALSGPDTGGSQWFITLAQQPHLDGGYTVFGQVTDGVPVLLRITQGDQIRTI
                     RR"
     gene            1360..>2548
                     /locus_tag="VLD58_10550"
     CDS             1360..>2548
                     /locus_tag="VLD58_10550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54789.1"
                     /translation="MPRIRFRLRLALLVGLALLPSLLAAQFFQGDENKIQYRRLDWQV
                     LKGQRVDVYYYPEEAELAPVALAYAEETYDVLAVKFGHTVSSRVPLIIYASHTDFEQT
                     NILPFTPPEGLLGVTDFLKRRVTLPFRGNLAEFRHTLRHEMVHVFQISLLFDRYLKSP
                     RAAQVPLPLWFTEGLAEYWSAGEDARDEMILRDLVLTGRLPRLADLEFVSGGIVYPLG
                     GRIHRWLADTYGDWRIATFYRELWRYDSFSQAMAATYGKSMDRLNEEFQEAMRRAYFP
                     VVNDRSSLAASAQLLSRAAIKPVYSANDTTGGDVVYAGAGNGFVTLTRRPLDGSRGPD
                     ALVKAGRSSSFENLHAFDSRVDASRPGLLLLSTKYQERDALVIYDRDNRRVVGRYQFP
                     HLVS"
BASE COUNT          364 a          920 c          830 g          434 t
ORIGIN      
        1 ggcggtgcgg gccgccgccg cccgggccct gaatcgcgcc ctggccgatt ccgcgggcct
       61 caaccccgaa tcggtgatgg atgtgctgct gcgctcgctc tccgatcccg atgcgggggt
      121 ccggatccag gggctccgga gtatcgccac gttccacact gagcgcgcgg tgcccaaggt
      181 tctgccgctc ctcgacgatc cattcaacaa cgtccaggtc caagccgccg aagccctggg
      241 tgacatgccg ggcaccggag cactggccca gctcacccgg atcgcgactg gcaccaaggg
      301 gagctttgcc cgccggcgtt ccgcgttcct ttcgcttgcc aagctggatt ccgctgcctt
      361 cgccgccgcg gccccgcgct acgaatcgag tagcgattgg agggagcggg ccgccgccgc
      421 cgaagggtgg gcccggttcc cctcgacccg gggccggctc ctgaatgacc gcgaccctcg
      481 ggttgttgcc gcttcagtct ccgcctggag cacccaggtg accggccccg atacggccct
      541 ggtccggacc gcgcgcggcc tcctgagcca gaaggacgcc gccgtacgcg ccgtggccgc
      601 cgacgcggtg ggacgcgcga ccgacccgcg cgatgtgccc gctctcgtcg cggccgtgcg
      661 ggcagcccgg agcgattcct tccccgaagc cactctctcc gccctcggcg ccctggtcgc
      721 gatccgcggg gcgtctcccg aggccgaacg ggccgtagac caggaggcgc tcgcggccct
      781 cccggttccc gctgactacg tggtcaagcg ctgggccgag gagaactggc ccgcggctgc
      841 ggcggcgtgg ggtagcccat atccggtgag cactggccgg agcctcgagg actatcgcca
      901 gatcgtgcgc agctatctca ttggccagct gccgagccgc tatcccaagg tgaggatcga
      961 ggtcgatcag ctggggccga tggaagtaga gctgttcggg cccgtggccc cgctcaccgt
     1021 cgccaacttc ctgacgctgg tggatcggcg ctacttcgac gggctccgct ttcaccgggt
     1081 ggtccccaac ttcgtggccc agactggcga tccccgggga gatggctacg gcgggcccgg
     1141 tggtgcgatc cgcgacgaga tcaatcgccg ccggtacggc gccttcgtgc tgggtatggc
     1201 gctgtcaggc ccggacaccg gcggaagcca gtggttcatt accctcgccc agcagcccca
     1261 tctggacggc ggctacactg tgtttgggca ggtcacggac ggcgtccccg tgttacttcg
     1321 cattactcag ggtgaccaga tccgtacgat ccgacgctga tgccacgcat acgcttccgc
     1381 ctccgcctgg ccctgcttgt cgggctggca ctgctgccat cgctgctcgc cgcccagttc
     1441 tttcagggtg acgagaacaa gatccagtac cgtcgactcg actggcaggt gctcaagggg
     1501 cagcgggtgg atgtgtacta ctaccccgag gaagccgagc tggcgccggt ggcgctggcg
     1561 tacgccgagg agacgtacga cgtcctcgcg gtgaagttcg ggcacacggt ttcctcccgc
     1621 gtccccctca tcatctacgc ctcgcacacc gacttcgagc agaccaacat cctccccttc
     1681 acgccgccgg aagggctgct cggtgtcacc gactttctca agcggcgggt caccctgccg
     1741 ttccgcggca acctggcgga gttccgccat acgctgcggc acgagatggt gcacgtcttc
     1801 cagatcagtc tcctcttcga ccgctacctc aagtcgcccc gcgcggccca ggtgccgctc
     1861 ccgctctggt tcaccgaggg gctggccgag tactggtcgg caggggagga tgcccgcgac
     1921 gagatgatcc tccgggacct ggtgctgacc ggccggctgc cgcggcttgc cgatctcgag
     1981 tttgtcagtg ggggcatcgt gtatccgctg ggcgggcgga ttcaccgctg gctggccgac
     2041 acctacggcg actggcggat cgccaccttc tatcgcgagc tctggcgcta cgacagcttt
     2101 tcccaggcga tggcggcgac ctacggcaag agcatggacc gcctgaacga ggagttccag
     2161 gaggcgatgc ggcgggccta cttccccgtc gtcaacgacc ggagctccct cgctgcctcg
     2221 gcccagctcc tctcccgtgc ggccatcaag ccggtctatt ccgccaacga caccaccggc
     2281 ggcgacgtgg tctacgccgg cgccggcaac ggcttcgtca ccctcacccg ccgtccgctc
     2341 gatggcagca ggggacccga cgcactggtg aaggccggcc gctcctcgag cttcgagaat
     2401 ctccacgcct tcgattcgcg ggtcgacgcc tcacgccccg gtctccttct gctcagcacc
     2461 aagtaccagg agcgggacgc gctcgtgatc tacgaccggg acaatcggcg ggtggtgggc
     2521 cgctaccagt tcccccatct ggtctcgg
//
LOCUS       DATIFF010000714         1588 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_245416, whole genome shotgun sequence.
ACCESSION   DATIFF010000714 DATIFF010000000
VERSION     DATIFF010000714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_245416"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..899)
                     /locus_tag="VLD58_10555"
     CDS             complement(<1..899)
                     /locus_tag="VLD58_10555"
                     /inference="COORDINATES: protein motif:HMM:NF021126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhO family protein"
                     /protein_id="HSB54790.1"
                     /translation="MSNPKRTPPPPAETFTPYTPAWPTLTAFGFLCLWIASLSLPMWS
                     GQFLARAPFSDQAIDGYAIRWWGADVWRMSGHPPQWNPYLFGGHPVFTGFGDLFYPSA
                     WLRLMLPTVTAMNLTFVLHYLLAGLFVYLLLRQLGLSWLGSLTGATGYQLSGVVVSLV
                     SPGHDGKLFVTAMLPLMLLSLVLAIRRRRWEGYALLGLAVGLALLSPQYQMAQYALIT
                     SGIFTLYLAFGEPVGLTPRERWLAFAGAAGGVVLGFGISMIQVLPFFHTIPYGTRAGE
                     AGYAWSASYAMPWSHVPELFLSG"
     gene            complement(896..>1588)
                     /locus_tag="VLD58_10560"
     CDS             complement(896..>1588)
                     /locus_tag="VLD58_10560"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HSB54791.1"
                     /translation="SYGAAARICMVSNLGKYIPGKVWAVAGNAFLAQRAGVEPHAAVA
                     GAILNQALSLASGVILVGLVGPAALRQYGGAYVEATVILGVLALLAVLALTSTRALAL
                     LQRALPSSLPRLVPVPLGVMAGSLAVNAVAWAGYGVAFLALARGLTPDAHLSWSQATA
                     VFTISYLVGLVALFAPGGVGVRESAFTLLLAPPLGLKLAVALALASRVLLTITELGAA
                     VPFLLVRKGPPR"
BASE COUNT          318 a          554 c          537 g          179 t
ORIGIN      
        1 aacccggaga gaaagagctc cggcacgtgg ctccacggca tcgcgtagga cgcggaccag
       61 gcgtatcccg cctctcccgc acgggtcccg tacgggatcg tatggaagaa cggcagcacc
      121 tggatcatcg agatcccgaa cccgaggacc accccgccag cggccccggc aaaggcgagc
      181 caccgctcgc gcggagtgag cccaaccggc tcgccgaacg cgaggtacag ggtgaagatc
      241 ccgctcgtga tcagtgcgta ctgcgccatc tggtactgcg gagaaagcag tgccagaccc
      301 acggcgagtc ccagcaatgc atagccctcc cagcggcgcc ggcggatcgc gagaaccagc
      361 gacaggagca tcaagggcag catggcggtg acgaacaatt ttccgtcgtg gcccgggctg
      421 accaacgaga ccacgacgcc gctcagctgg tagccggtcg cgcccgtgag cgagccgagc
      481 catgacagcc cgagctggcg cagcaggaga tacacgaaca ggccggcgag caggtagtgg
      541 agcacgaacg tcaggttcat cgccgtgacg gtcggtagca tgaggcgcaa ccaggccgac
      601 gggtagaaga ggtcgccgaa acccgtgaat accggatgcc caccgaacag gtacggattc
      661 cactgcggcg ggtggccgct catgcgccat acgtcggcgc cccaccaccg aatggcatac
      721 ccgtcgatgg cctgatcgct gaacggggcc cgggccagaa actgtccgct ccacatcggc
      781 agagacagac tcgcgatcca gaggcagagg aacccgaagg ccgtcagcgt cggccacgcc
      841 ggcgtgtacg gcgtgaacgt ctccgccggt gggggtggag tgcgcttcgg gttgctcaac
      901 ggggtggccc ctttcgcacg agcagaaacg gcacggccgc tccgagctcc gtgatcgtga
      961 gaagaacgcg gctggcgagt gcgagcgcta ccgccagctt gagccccaag ggcggcgcga
     1021 gcaacagggt gaaggccgat tcccgcaccc ctacgccacc cggcgcgaac agcgccacga
     1081 ggccgacaag atacgaaatc gtaaacaccg ccgtcgcctg gctccagctc aggtgggcgt
     1141 cgggggtgag cccccgggcc agggccagga atgcgacccc atacccggcc caggccacgg
     1201 cgttcaccgc cagtgacccg gccatgaccc ccagcggcac gggaacgagc cgggggagcg
     1261 aggacgggag cgcccgctgg agcaacgcca gagcccgcgt cgaagtgagc gccaggacgg
     1321 cgagcagcgc cagcacgccg aggatgacgg tcgcctccac gtacgccccg ccgtactggc
     1381 gcagcgccgc agggccgacc aggccgacca ggatcacccc gctggccagt gaaagggcct
     1441 ggttcaggat cgccccggcc acggcggcgt gcggctcgac cccggcgcgc tgcgccagga
     1501 acgcgttccc cgccaccgcc cagaccttcc ccggaatgta cttgccgagg ttcgacacca
     1561 tgcagattcg cgctgccgcc ccgtagct
//
LOCUS       DATIFF010000715         2737 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_551843, whole genome shotgun sequence.
ACCESSION   DATIFF010000715 DATIFF010000000
VERSION     DATIFF010000715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2737
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_551843"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            54..893
                     /locus_tag="VLD58_10565"
     CDS             54..893
                     /locus_tag="VLD58_10565"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB54792.1"
                     /translation="MNLHEAWRVLWSRPGSRAGVLILSLLIIIALLAPPFLPNPRAMP
                     DLGKVSLQKPGPGHWLGTDRDNRDVLSRVVNGARISLTVAAGAVALSVTLGTLVGMLA
                     GYAGGWVDTVLMRLVDAALAVPRLFLLLIMVAIMERIPLAVLVLVLGATGWFGTSRLV
                     RAEVQRLRSLDFVHAAEALGASRRRIAFRHLLPNVAGPLAAATTLAVGDVILLEAGLS
                     FLGLGVQPPTPSWGGMILEAQPYLITAPWTSLAPGIAVLVTVLAVNLIGEALHEAYAH
                     AHP"
     gene            890..1882
                     /locus_tag="VLD58_10570"
     CDS             890..1882
                     /locus_tag="VLD58_10570"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB54793.1"
                     /translation="MTTLLELRNLRVSFPGARGPVWPVDGVSLTLDRGETLALVGESG
                     SGKTLTGLSLLRLLPPGGAIDPASSIQLDGRDLLALSPEQLRQVRGRRIAMVFQDPMS
                     SLNPVLTVGDQISETVLAHLPVSKQDARSRALALLAEVGIPEPAERYDSYPHQLSGGM
                     RQRVMIAIALSAEPELLIADEPTSALDVTVQAQILELLDRLRTARGMAVLLITHDLGI
                     VAGRADRVAVMYAGRIVEQAKTADLFALPSHPYTQGLFASIPRLSGPRRRIEPIAGMV
                     PSPADWPSGCRFRNRCPRVMDQCASEPPVRVPEPGHESRCWSEGVEGQGSRAAG"
     gene            1888..>2737
                     /locus_tag="VLD58_10575"
     CDS             1888..>2737
                     /locus_tag="VLD58_10575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HSB54794.1"
                     /translation="MPLLTVENLVKHYATTGLFGRGKAVRAVDGVSFEIERGETLALV
                     GESGSGKTTVGRTILRLTEATAGKVTFEGQDVFGLDRLALRGLRRRMQIIFQDPAGAL
                     NPRMRIGDAIAEGLEIHRLATRMEIPGRVAGLMQEVGLDPALAARFPREISGGQRQRV
                     GIARALAVEPALLVCDEPVSALDVSVQAQVINLLADLQQRRGLSYLFIAHDLAVVRQL
                     AHRIAVMYLGKIVETGAAESLLSAPRHPYTQALLSAVPEPVPGQAAHRILLPGDPPSP
                     ADPPSGC"
BASE COUNT          369 a          990 c          933 g          445 t
ORIGIN      
        1 aacctcctcg ccgatgtggc tcaccgctgg ctcgacccga ggctccgcgg cgcgtgaacc
       61 tccacgaggc ctggcgagtc ctctggtccc gtcccggcag ccgggccggg gtgctgatcc
      121 tgtccctcct catcatcatc gcgctgctgg ccccgccctt cctccccaat ccacgggcaa
      181 tgcccgacct cggaaaggtc tcgctccaga aacccggacc ggggcactgg ctcggcaccg
      241 atcgcgataa ccgcgatgtg ctctcccggg tcgtgaacgg tgcgcggatc tccctgacgg
      301 tagcagccgg cgcggtggca ctctccgtca ccctcggtac cctggtgggc atgctggccg
      361 gctacgccgg tggctgggtc gataccgtgc tgatgcggct ggtggatgcg gctctcgccg
      421 tcccgcggct cttcctgctc ctcatcatgg tcgccatcat ggagcggatt ccgctggcgg
      481 tgctggtcct ggtcctcggc gccaccggct ggttcggcac cagccggctg gtgcgggccg
      541 aggtacagcg gctccgctcg ctcgatttcg tgcacgccgc ggaggcgctg ggcgcgagcc
      601 gccggcggat cgccttccgg catctcctgc cgaacgtggc cggaccgctg gccgccgcca
      661 ccacgctcgc ggtgggagac gtgatcctgc tcgaggcggg gctctcgttc ctggggctcg
      721 gcgtccagcc gccgaccccg tcgtggggcg gaatgattct cgaagctcag ccgtatctga
      781 tcaccgcacc ctggaccagc ctcgctcccg gcatcgcggt gctggtcacg gtgctggccg
      841 tcaacctcat cggcgaggcc ctgcacgagg cctacgccca cgcccacccg tgaccacact
      901 gctcgagctc cgcaatctcc gggtgagttt ccccggcgcc cgcggcccgg tctggccggt
      961 ggatggcgtg agcctcaccc tcgaccgggg cgagaccctc gcgctggtcg gggagtcggg
     1021 atcgggcaag acgctcaccg gcctctccct cctccggctg ctgccgccgg gcggagcgat
     1081 cgaccccgcc agctcaattc agctcgacgg gcgcgatctc ctcgcgcttt cccccgaaca
     1141 gctccgtcag gtgcgggggc gccggatcgc gatggtcttc caggacccga tgagcagcct
     1201 caacccggtc cttaccgtgg gtgaccagat cagcgagacg gtcctggcgc acctgccagt
     1261 gtcgaagcag gacgcaaggt cccgtgccct ggccttgctc gccgaagtgg gtatacccga
     1321 gccggctgag cgctacgaca gctatcccca ccagttgagc ggcgggatgc gacagcgggt
     1381 gatgatcgcc atcgcgctgt cggcggagcc ggaactgctg atcgccgatg agccaaccag
     1441 cgcgctcgat gtgacggtgc aggcgcagat cctcgagctg ctcgaccggc tccgcaccgc
     1501 ccggggcatg gcggtgctgc tcatcactca cgatctcggt atcgtcgcgg gccgcgccga
     1561 ccgggtggcg gtgatgtacg ccggccggat cgtggagcaa gcgaagaccg ccgatctttt
     1621 cgccctgccg tcgcatccgt acacccaggg gctcttcgcg tcgattccgc gcctcagcgg
     1681 tcccaggcgc cggatcgagc cgatcgccgg gatggtgccg tcacccgccg attggcccag
     1741 cggctgccgc ttccggaacc gctgccccag ggtgatggac cagtgcgcca gtgagccgcc
     1801 ggtgcgggtg cccgagccgg ggcatgagag tcggtgctgg agtgaagggg tcgagggtca
     1861 ggggtcgagg gccgcaggct gactaccatg ccactcctca ctgtcgagaa cctcgtcaag
     1921 cactacgcca ccaccggcct cttcggccgg ggaaaggcgg tgcgcgcggt ggacggagtg
     1981 tccttcgaga tcgagcgggg cgagactctc gcgctggtgg gcgaatccgg ctcgggcaag
     2041 accacggtgg gccgcaccat cctccggctc accgaggcga ccgccggcaa ggtcaccttc
     2101 gaagggcagg acgtattcgg cctcgaccgg ctggccttgc ggggactccg gcgccggatg
     2161 cagatcatct tccaggaccc ggccggcgcg ctcaatcccc gcatgcggat cggtgacgcg
     2221 atcgccgagg ggctcgagat ccaccgcctg gcaacccgga tggaaatccc gggccgggtg
     2281 gcgggactga tgcaggaagt cgggctcgac cctgcgctgg ccgcccgctt cccgcgggag
     2341 atctccggcg gccagcggca gcgggtcggg atcgcccgtg cgctcgcggt cgaacccgcc
     2401 ctgctggtct gcgacgagcc ggtctcggcc ctcgatgtct cggtgcaggc gcaggtgatc
     2461 aacctgctcg ccgatttgca gcagcggcgc gggctctcct acctcttcat cgcgcacgac
     2521 ctcgccgtcg ttcggcagct cgcccaccgg atcgcggtga tgtatctcgg aaagatcgtg
     2581 gagactggtg cggcggagtc actgctgagc gcgcctcgac acccctacac ccaggcgctc
     2641 ctttcggcgg tgccggagcc ggtgccggga caggccgcac accgcatcct cctccctggc
     2701 gatccgccga gcccggcgga tcctccttcg gggtgcc
//
LOCUS       DATIFF010000716         2797 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_397475, whole genome shotgun sequence.
ACCESSION   DATIFF010000716 DATIFF010000000
VERSION     DATIFF010000716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2797
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_397475"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1494)
                     /locus_tag="VLD58_10580"
     CDS             complement(<1..1494)
                     /locus_tag="VLD58_10580"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB54795.1"
                     /translation="MAIDKQRWAALRPLLEQALEMAPDARATWLNAQRARDPGLATEL
                     EGMLAEELRLEKEGFLAQGASALGATASLAGQAVGPYTLESLLGQGGMGSVWLARRTD
                     GRFDARVAVKFMSIAMLDPVMQARFRREGSTLARLAHPNIARLIDAGVGLAGQPYLVL
                     EYVDGKPLDTWCDDARLGATDRIKLFGQVLAAVQHAHANLIVHRDLKPSNILVTTDGT
                     VKLLDFGIAKLLDSEDGAATALTQAGSGAFTPEYASPEQVRGEPVSVATDVYSLGVLL
                     YQLLAGRHPTGEGCRTPSDFVRAILDTDPARLSDVITRPGADTASARSATTDRLRRLY
                     HGDLDNILARALKKDPAERYPSVSAFADDLNRFLRHEPVSARADSWGYRAGKFVRRNR
                     GSVTSAVIVALALIGATFITWRQMLEARQQRDEAVFQAKRADAIRTFQGLLISQIGEK
                     PLTMRELLDKGRGILTRYRGDPRVTATMLGQFAERYGELSDNATSLAL"
     gene            complement(1522..>2797)
                     /locus_tag="VLD58_10585"
     CDS             complement(1522..>2797)
                     /locus_tag="VLD58_10585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54796.1"
                     /translation="ASISGMLARQYGEIGAYDAALAMLAHSDSFAALAGNREQLIQNS
                     CNRAAYLSNSDQTQAAHALLDSLRPRLVDGPLAVLPECLVIQAGILTDDQHADSAVVL
                     ARHGIALMEQRGDTGEAAYVEALDILANALENSHHRRAALEVYQRLAALLDRTGRRET
                     VSRNAISNNIGIALSNLGQLVEAEPVLLETAEQFRRTNPEHEVHPAIMVNYARTLIEL
                     NRLDSAAIWARQLRVQAAREKIVGLEQTALFFLARIDIARGRLDEAAATIAAFRALQP
                     RMPRPHPEDVMQLEGMLSRARGQVAEAHDRILAALKAGGYFEGRRGYGTRSLLALAAR
                     TALEAGQPDEALRFARAADSLAAEDSLAVTRSAFVGEARLLQARALVARGDSSGARHI
                     IGSAITALGAGAGPRHPLTLEAEALRKSLGGP"
BASE COUNT          400 a          981 c          984 g          432 t
ORIGIN      
        1 cagggcgagc gacgtggcgt tgtcgctcag ctccccgtac cgctcggcga actgccccag
       61 catcgtggcg gtgacccgcg gatcgccccg gtagcgggtg aggataccgc gccccttgtc
      121 gagcagttcc cgcatggtga gcggcttctc gccgatctgc gagatcagca ggccctggaa
      181 cgtgcggatc gcatcggccc gcttggcctg gaacaccgcc tcgtcccgtt gctggcgggc
      241 ttcgagcatc tggcgccagg tgatgaacgt ggccccgatc agcgccagcg ccacgatcac
      301 cgcactcgtg accgagccgc ggttgcgccg cacgaacttg cccgcccggt agccccacga
      361 atcggcccgg gccgataccg gctcatgccg gaggaagcgg ttgaggtcgt ccgcgaaggc
      421 cgacacactc gggtagcgct cggcggggtc cttcttgaga gcgcgggcca ggatgttgtc
      481 gagatcgccg tggtagaggc ggcgcaaccg gtcggtggtc gccgaccggg ccgatgcggt
      541 atcggccccc ggacgggtga tgacatcgct gaggcgcgcc ggatcggtat cgaggatcgc
      601 gcgcacgaag tccgacggcg tgcggcaccc ttcaccggtc ggatgccgtc ccgcgagcag
      661 ctgatagagc agcacgccga ggctgtagac gtcggtggcg acggagaccg gttcgccccg
      721 gacctgctcg ggagaggcgt actcgggtgt gaacgcccct gacccggcct gggtgagggc
      781 ggtggcggcg ccgtcttcgc tgtcgagcag cttggcgatg ccgaagtcga gcagcttcac
      841 cgtgccgtcg gtagtcacca ggatgttgga cggcttgaga tcgcggtgca cgatgaggtt
      901 ggcgtgggcg tgctgcaccg ccgccagcac ctggccgaag agcttgatcc ggtcggtggc
      961 acccaacctg gcgtcgtcac accaggtatc gagcggcttg ccgtcgacat actcgagcac
     1021 caggtagggc tggccggcga ggccgactcc cgcgtcgatc agccgggcga tgttgggatg
     1081 cgccagccgg gcgagggtgc tgccctccct ccggaaccgc gcctgcatga ccgggtccag
     1141 catggcgatg ctcatgaact tcaccgccac ccgcgcatcg aagcggccgt cggtgcgccg
     1201 ggccagccag acgctgccca tcccgccctg ccccagcagc gactcgaggg tatagggtcc
     1261 gactgcctgc cctgcgagcg aggcagtcgc cccgagggcc gacgcgccct gcgcgaggaa
     1321 gccttccttc tccagccgga gttcttccgc cagcatgcct tcgagttcgg tggcgagccc
     1381 gggatcacgg gcgcgctggg cgttgagcca ggtcgcgcgc gcgtcgggtg ccatctccag
     1441 cgcctgctcc agcagcgggc ggagtgcggc ccacctctgc ttgtctatgg ccatgggttt
     1501 cctccctgaa accgtcgtac cttacggccc gcccagcgac ttccgcaacg cctccgcttc
     1561 gagcgtgagc ggatgcctgg gtccggcgcc cgcgccaagc gcggtgatgg cggagccgat
     1621 aatatgccgg gcgccgctcg agtcgccacg cgccaccagg gcgcgggcct ggagcagccg
     1681 ggcttctccc acaaatgcgc tgcgcgtcac cgccagcgag tcctccgccg ccagcgagtc
     1741 ggccgcccgc gcaaaccgga gcgcctcgtc cggctgtccc gcctcgagcg cggtccgcgc
     1801 cgcaagggcg aggagactcc gggtcccgta gccacgccgg ccttcgaagt accctcccgc
     1861 cttgagggca gcgaggatcc ggtcgtgggc ttccgccacc tggccccgcg cccggctcaa
     1921 catcccttcg agctgcatca cgtcctcggg atggggccgg ggcatccgcg gctgcagcgc
     1981 ccggaaggcc gcgatcgtcg ccgccgcctc gtcgaggcga ccccgcgcga tgtcgatccg
     2041 ggccagaaag aagagcgcgg tctgttccag gcccacgatc ttctcgcggg ccgcctggac
     2101 ccggagctga cgggcccaga tggccgcgga gtcgagccgg ttgagctcga tgagggtgcg
     2161 ggcgtagttc accatgatcg ccgggtgcac ctcatgctcg ggattggtgc ggcggaactg
     2221 ctcggcggtc tccagcagca ccggctcggc ctcgaccagc tggcccaggt tcgagagcgc
     2281 gatcccgatg ttgttgctga tcgcgttgcg tgacaccgtc tcccgccggc cggtccggtc
     2341 gaggagcgcg gcgaggcgct gatagacctc gagcgccgcc cgccgatggt gcgagttctc
     2401 gagcgcattg gcgaggatat cgagcgcctc gacgtaggcc gcctccccgg tgtcaccccg
     2461 ctgctccatc agcgcaatgc cgtgccgcgc cagcaccacc gcagagtcgg catgctggtc
     2521 gtcggtcagg atccccgcct ggatcaccag gcattccggc agcacggcca acggcccgtc
     2581 gaccaggcgc ggccggaggc tgtcgagcag cgcgtgggct gcctgggtct ggtccgaatt
     2641 gctcaggtag gcggcgcgat tgcagctgtt ctggatcagc tgttcccggt tgcccgccag
     2701 cgccgcaaac gaatccgaat gcgccagcat ggccagggcc gcatcgtagg cgccgatctc
     2761 accgtactgg cgcgcgagca tgccgctgat ggaggcg
//
LOCUS       DATIFF010000717         1373 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2090946, whole genome shotgun sequence.
ACCESSION   DATIFF010000717 DATIFF010000000
VERSION     DATIFF010000717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1373)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1373
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2090946"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..973)
                     /locus_tag="VLD58_10590"
     CDS             complement(<1..973)
                     /locus_tag="VLD58_10590"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSB54797.1"
                     /translation="MLNGTVDAETGLAAELESARTEIARYREGLAQIAAVCREAARGN
                     LEPRLRDMGANTDLDEVRRGLNHLLDLTDAFVREAGASLTYASEGKYFRRVLLRGLAG
                     SFHDGAVTINKSTSIMADAARKLADAERRRLDMADTFEAEVKGVSEHVAAASTEMRST
                     SGGLAQSADHTAQQAQVVARAAAQASSGVTSIASAQEELSSTVAEIERQVSATSTAAR
                     GAVRETERASETVRGLTEASRQIGQVITVITQVASQTRLLALNATIEAARAGEAGKGF
                     AVVASEVKSLAGQTAQATELIGQQISGIQTATAHAVQAISGIGESIRK"
     gene            complement(967..>1373)
                     /locus_tag="VLD58_10595"
     CDS             complement(967..>1373)
                     /locus_tag="VLD58_10595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54798.1"
                     /translation="LIGAPHSLIRHPQMPRGIFKLLWETIQQRREIFAYVMNLTRTGD
                     HYWVLAHVTPTFGSRGDIVGYHSNRRVPSREGLNRILPLYDRMLAEERRHERKPDAAQ
                     ASLKVLEQALAELGQDYDEFVWSTENQVGAAC"
BASE COUNT          186 a          493 c          448 g          246 t
ORIGIN      
        1 ccttcctgat actctcaccg atcccgctga tggcctgcac cgcgtgcgcg gtggcggtct
       61 ggattccgct gatctgctga ccgatgagct cggtggcctg agccgtctgg ccggccaggc
      121 tcttcacttc tgacgccacc accgcgaagc ccttcccggc ttcgccggcg cgggccgcct
      181 cgatcgtcgc gttgagcgcg agcagccggg tctggctcgc cacctgggtg atcacggtga
      241 tgacctgccc gatctgccgc gaagcctcgg tcagccctcg caccgtttcg ctcgcgcgtt
      301 cggtctcgcg taccgcgccg cgcgcggcgg tgctggtggc cgagacctgc cgctcgattt
      361 cggcaacagt gctggagagc tcctcctggg ccgaggcgat cgaggtgacg ccactcgagg
      421 cctgggccgc ggcccgggcg acgacctggg cctgctgggc ggtgtgatcg gccgactggg
      481 ccagtccacc cgacgtcgac cgcatttcgg tcgaggctgc cgcgacatgc tcggagacgc
      541 cctttacctc tgcctcgaac gtgtccgcca tgtcgagacg gcgccgctcc gcgtccgcca
      601 gtttccgggc cgcgtcggcc attatgctgg tcgacttgtt gatggtgacc gcaccgtcgt
      661 ggaacgagcc ggcaagtccg cggagcagca cccggcggaa gtacttccct tcgctggcat
      721 aggtcagcga ggcgcccgcc tcgcgcacga aggcatcggt caggtcgagc aggtggttga
      781 gcccgcggcg aacttcgtcg aggtccgtgt tggcacccat gtcgcggagc cgcggctcga
      841 ggttgccccg tgccgcctcc cgacacaccg cggcaatctg cgccagtcct tcccggtacc
      901 gcgcaatctc cgtccgggcc gactccagtt cggccgccag ccctgtctct gcgtcaacag
      961 tcccgttcag catgccgccc ccacctggtt ctccgtcgac cacacgaact cgtcgtaatc
     1021 ctgccccagc tccgccagcg cctgctcgag caccttgagc gaggcctggg ccgcgtcggg
     1081 tttccgctcg tggcgccgct cctccgccag catccggtca tacaggggga gaatgcggtt
     1141 gaggccctcg cgactcggga cccgccggtt cgagtgatac ccgacgatgt caccccggga
     1201 accgaaagtc ggcgtcacgt gggccagcac ccagtagtga tcgccagtcc gggtcaggtt
     1261 catcacgtag gcgaagatct cgcggcgctg ctggatggtt tcccacagca gcttgaagat
     1321 gccccgcggc atctggggat ggcggatgag actgtgcggc gcgccgatca gct
//
LOCUS       DATIFF010000718         1112 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_397704, whole genome shotgun sequence.
ACCESSION   DATIFF010000718 DATIFF010000000
VERSION     DATIFF010000718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_397704"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..934
                     /locus_tag="VLD58_10600"
     CDS             <1..934
                     /locus_tag="VLD58_10600"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSB54799.1"
                     /translation="DFLADAVHTSKAVGRPVKVIYTREDDMHAGWYRPVAYNALSAAL
                     DADGWPTAWVHRIASPSILEHMGPLRGGIDGTSVEGAQNLPYAIPNLLVTYAKPDFPI
                     PVWFWRSVGSSINGYVTECFLDELALAGGKDPVELRRRLLSDQPRHRRALDLAAQKAG
                     WGTPLPAGRARGVAVHESFGSIVAEVAEVSLGEGGEPRVHRVVCAVDCGQYVNPDTVV
                     AQMESGIVYGLSAALYGEITIDKGRAVQDNFDSYQVLRIDQMPLVETHIVAEGDPMGG
                     VGEPGTPPIAPAVCNALLVLTGKPVRRLPIVKMT"
BASE COUNT          173 a          362 c          399 g          178 t
ORIGIN      
        1 cgatttcctg gccgatgccg ttcacacctc gaaggcggta ggccggccgg tcaaggtcat
       61 ctacacgcgc gaggacgaca tgcacgccgg gtggtaccgc ccggtggcgt acaacgcgct
      121 cagcgccgcg ctcgatgcgg atggctggcc cacggcgtgg gtacatcgta tcgcgagccc
      181 ctcgattctc gagcacatgg gaccgctgcg gggcggtatc gacgggacgt cggtcgaggg
      241 cgcgcagaat ctgccctatg ccatacccaa tctgctcgtg acctacgcca agcccgattt
      301 cccgattccg gtgtggttct ggcgctcggt gggcagctcg atcaacgggt acgtgaccga
      361 gtgtttcctg gacgagctgg cgctggcggg cgggaaggat ccggtggagt tgcgccgccg
      421 cctcctgagc gaccagccgc gccaccgccg cgcgttggac ctcgcggcgc agaaggccgg
      481 gtggggcacg ccgctccccg cgggccgggc gcgcggtgtg gcggtgcacg agtcgttcgg
      541 cagcatcgtg gccgaggtcg ccgaggtgtc gttgggcgaa ggcggcgagc cgcgcgtgca
      601 ccgtgtcgtg tgcgccgtcg attgcggcca gtacgtgaac cccgacacgg tcgttgccca
      661 gatggagagc gggatcgtct acgggctctc cgcggcgctg tacggcgaga tcacgatcga
      721 taaagggcgg gccgtccagg acaacttcga ctcctaccag gtgctgcgta tcgaccagat
      781 gcccctggtg gagacccaca tcgtggccga gggcgacccg atgggcgggg tcggcgagcc
      841 ggggaccccc cccatcgcac cggcggtgtg caatgcgctg ctcgtgctca ccgggaaacc
      901 ggtgcggcgg ctgccgatcg tgaagatgac ctaggggaaa ctcgttacac ggcggccgcc
      961 tcctccagtg tagcattcag gaagaccccg gccacggccg gcgccggtgc cgggacccgc
     1021 ccggccccag gtcttccttg cagtcgacac aggatcggca ggtattgtgg tcgccattca
     1081 ggtatcggaa aaggacctcg cccagttcga ga
//
LOCUS       DATIFF010000719         2760 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2244049, whole genome shotgun sequence.
ACCESSION   DATIFF010000719 DATIFF010000000
VERSION     DATIFF010000719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2760
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2244049"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            34..1068
                     /locus_tag="VLD58_10605"
     CDS             34..1068
                     /locus_tag="VLD58_10605"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB54800.1"
                     /translation="MTLPDQALAHLRQMLGSPDVAGERYTLHEPVGQGGMGTVYRASD
                     RALGRDVAVKVLRGDVADAEAAARLEREARILARLEHPGIVPVHDVGMLADGRVFYVM
                     KLVRGRQLQEFVRGAARSDVLRVVLRVCETVGFAHAHGVVHRDLKPANIMVGAFGEVL
                     VLDWGIARVVGVGRTAESGTREAASGSVGAPGTRTGHAPPDPLPALRASPEPVTAPGT
                     VLGTPGFMAPEQAQGEPGLVDARADVYGLGAILRSVLADHGDRRGVPRPLQAIWTRAL
                     SPDPAARYPSAADLAADITRFLDAQPVTAYREPFAERVGRIFRKYQTAIILVLTYLAV
                     RLLFLLLRGV"
     gene            1146..1511
                     /locus_tag="VLD58_10610"
     CDS             1146..1511
                     /locus_tag="VLD58_10610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54801.1"
                     /translation="MNKPVLGLLLGGALGALDGLTALISAPEVKPEIIGIVIGSTGKG
                     LLAGLLIGFLSRKVNNLAAGILIGTVIAALLALPIALHADPVTGKRYVWEIMIPGSIV
                     GLIVGYATQKFGRPAVERS"
     gene            1554..1919
                     /locus_tag="VLD58_10615"
     CDS             1554..1919
                     /locus_tag="VLD58_10615"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSB54802.1"
                     /translation="MPRPVHFEIPADQPERAVAFYRKVFGWEFQKWEGPMPYWLVSTG
                     TEPRGIDGGLHPRAHPGQGTVNTIDVPSCDDYVRKVTGAGGKVAVPKMAIPGVGWLAY
                     CTDPEGNTFGIMQADTAAR"
     gene            complement(1959..>2760)
                     /locus_tag="VLD58_10620"
     CDS             complement(1959..>2760)
                     /locus_tag="VLD58_10620"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB54803.1"
                     /translation="AAADSLRMGGVALVVLPERWPEHEVEYRYDETRPESRTARLLVD
                     EALQRAAGRADPVRTADQRVAEVGARYIVFVVPGLLGLNLMGSGIWSVGFAVVDARRK
                     RLLKRLIATPMSRAEYLASFVLSRLSLLVIEVGTLLGFAVLVFGVPFRGSIWTLGLVC
                     VLSALAFTSLGLLLASRVQTIEGISGLSNLVMLPMWIFSGVFFSASRFPDAAQPLIRL
                     LPLTAVIDALRANILRGVGLGGITPQLLIITVWMVLSFPLALRLFRWK"
BASE COUNT          429 a          952 c          983 g          396 t
ORIGIN      
        1 ggaggcggaa gacctcttcg gagtccggat tccgtgaccc tcccggacca ggctctcgcg
       61 cacctccgcc agatgctcgg atcccccgat gtagcgggcg agcggtacac gctgcacgag
      121 ccggtgggcc agggcggcat gggcaccgtg tatcgcgcgt cagaccgcgc cctcggccgg
      181 gacgtcgcgg tcaaggtgct ccgcggtgac gtggccgacg cggaggccgc cgcgcggctc
      241 gagcgcgaag cccgtatcct ggcgcggctg gagcacccgg gcatcgtgcc cgtgcatgac
      301 gtcgggatgc tcgccgacgg gcgggtgttc tacgtcatga agctcgtccg cggccggcag
      361 ctccaggaat tcgtccgcgg cgcggcccgg agcgacgtgc tgcgggtggt gcttcgcgtg
      421 tgcgagacgg ttggattcgc tcacgcgcac ggcgtggtcc accgggacct caagcccgcg
      481 aacatcatgg tgggcgcgtt cggcgaggtg ctcgtgctcg attgggggat cgcgcgggtc
      541 gtgggagtgg gccggaccgc ggagtctggc acgcgcgaag ccgcgagcgg gtcggtgggg
      601 gccccgggca cacggacggg gcatgctccg cctgatcccc tccctgcgct ccgcgcttcc
      661 ccggagccgg tgaccgcacc cggcaccgtg ctcggcaccc cgggcttcat ggctccggaa
      721 caggcccagg gcgaacccgg gctggtggac gctcgggccg acgtgtacgg gctgggcgcc
      781 atcctccggt cggtgctggc ggaccacggg gataggcggg gcgtgccgcg cccgctgcag
      841 gcgatctgga ctcgcgctct ctcgcccgac cccgccgcgc gctatccctc cgccgccgac
      901 ctggccgcgg acatcacccg gttcctggac gcccagccag tgacggcgta ccgggagccg
      961 ttcgccgagc gggtcggccg gatcttccgg aagtaccaga cggccatcat tctcgtgctg
     1021 acctacctgg ccgtccgtct gctcttcctg ctcctgcggg gggtctaaag gaccggtcgg
     1081 cggcgggtaa tagaaccgat agagaccagt ccgtatccag ttcccccaag acccggaggt
     1141 cgcacgtgaa caagcccgtc ctcggcctgc tgcttggcgg cgctctcggc gcgctcgacg
     1201 gccttaccgc cctcatctcg gccccggagg tgaagccgga gatcatcggc atcgtcatcg
     1261 gatcgacggg caaggggctg ttggccggcc tgctcattgg tttcctgtcc cgcaaggtca
     1321 acaatctggc cgccggcatc ctgatcggga cggtgatcgc ggcgctgctc gcgctgccca
     1381 tcgccctgca tgcggatccc gtgaccggca agcgctacgt ctgggagatc atgatccccg
     1441 gttccatcgt gggtctgatc gtgggctatg ccacgcagaa attcggccgg cccgcggtcg
     1501 agcggtcctg accgcgccag caatttccat caccccaacc aggaagaggc ctcatgccgc
     1561 gtccggttca cttcgagatc cccgccgatc agcccgagcg ggcggtggcg ttctatcgaa
     1621 aggtgttcgg ctgggagttc cagaagtggg aagggccgat gccgtactgg ctggtcagta
     1681 ccggcaccga gccccgcggc atcgacggcg gcctccaccc ccgggcgcac cccggccagg
     1741 ggaccgtgaa caccatcgac gtgccgtcgt gtgacgacta tgtccgcaag gtgacgggtg
     1801 ccggtggaaa ggtggctgtg cccaagatgg cgatcccggg agtcggctgg ctggcctact
     1861 gcaccgatcc cgagggcaac acgttcggga tcatgcaggc ggacacggcg gcgcggtgag
     1921 cgtccggggc gcggcgcgga gccgcgcctg cctccgggct acttccagcg aaagagtcgt
     1981 agcgccagcg ggaagctcag caccatccag actgtgatga tcaggagctg gggcgtgatc
     2041 ccgccgagtc cgacacctcg aagaatattg gcgcggagcg cgtcgatcac ggcagtgagc
     2101 gggagcaggc ggatcagggg ctgcgccgca tcgggaaacc ggctcgccga gaagaacacg
     2161 ccggagaaga tccacatcgg gagcatcacc aggttggaga ggccggagat cccttcgatc
     2221 gtctgcaccc gcgaggcgag caacaggccg agagaggtga aggccaacgc cgataggacg
     2281 cagaccagcc cgagcgtcca gatcgagccc cggaacggca cgccgaagac cagcaccgcg
     2341 aacccgagca gcgtgccgac ctcgatgacg agcaggctca agcgggacag cacgaacgag
     2401 gcgaggtact cggcgcggga catcggcgtc gcgatcaggc gcttgagcag ccgtttgcgc
     2461 cgcgcgtcca cgaccgcgaa cccgacgctc cagatgccgc tgcccatcag gttcagcccc
     2521 aggaggcccg gcacgacgaa gacgatgtag cgggctccca cctcggccac ccgctggtcg
     2581 gccgtgcgga ccgggtccgc gcggccggcc gcgcgctgga gcgcctcgtc caccaggagg
     2641 cgggccgtgc ggctctccgg ccgggtctcg tcgtagcggt actcgacctc gtgctcgggc
     2701 cagcgctcgg gcagcaccac tagcgcgacg ccgcccatcc gcagcgaatc ggcggcggcc
//
LOCUS       DATIFF010000720         1009 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1782603, whole genome shotgun sequence.
ACCESSION   DATIFF010000720 DATIFF010000000
VERSION     DATIFF010000720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1782603"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..287
                     /locus_tag="VLD58_10625"
     CDS             <1..287
                     /locus_tag="VLD58_10625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54804.1"
                     /translation="MVGMVLGAVALTITVMSGVMAFGFARGFIRRRMRFVDAVRSPLT
                     PIIAGGIALLVAWPFLLLPLVTKVTAAVFSLGAGLGARSGVKALERGDYA"
     gene            354..596
                     /locus_tag="VLD58_10630"
     CDS             354..596
                     /locus_tag="VLD58_10630"
                     /inference="COORDINATES: protein motif:HMM:NF003817.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HSB54805.1"
                     /translation="MSDITCTRCGQTRAAQSFQPFPNDAGRRVFQDICAVCWAEWLKY
                     QQQLINHYALNLREPKAREFLLQQMEQFLFTSAPRP"
     gene            complement(574..>1009)
                     /locus_tag="VLD58_10635"
     CDS             complement(574..>1009)
                     /locus_tag="VLD58_10635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54806.1"
                     /translation="TVVSATLPTGTGPEGYGRGTASVNAVTMLRSDFGKRFTYEGSLG
                     FGVTPTHGRLAEFQRSAFVLIAQGLRGRVAGPLALYANVIWHSTVYRNIGTSELDAAD
                     LTTDVGGFLKFRGLPEIILGLTEDLKPSSPAIDLSFRVGARW"
BASE COUNT          148 a          350 c          342 g          169 t
ORIGIN      
        1 ttatggttgg catggtcttg ggcgcggtcg ccctgacgat cacggtgatg agcggcgtca
       61 tggcgttcgg tttcgcgcgc ggcttcatcc gacgccggat gcgcttcgtg gacgcggtgc
      121 ggtcgcccct caccccgatc atcgcgggcg gcatcgcgct gctggtggcg tggcccttcc
      181 tgctgcttcc gctggtgacg aaggtgaccg ccgcggtctt ctcgctgggc gccggcctgg
      241 gcgcgcggag cggggtcaag gccctggagc gcggcgacta cgcctgaagc gccggcgaca
      301 tgaagcgggg cacccggcgt tgaccacgcc aggtgccccg ctcacacttc agcatgtccg
      361 acatcacgtg tacgcgctgc ggccagaccc gggccgccca gtccttccag cccttcccca
      421 acgatgccgg ccggcgggtc ttccaggaca tctgcgccgt ctgctgggcc gagtggctca
      481 agtaccagca gcagctgatc aaccactacg ccctcaatct gcgggaaccc aaggcgaggg
      541 agttcctcct ccagcagatg gagcagttcc tcttcaccag cgcgccccga ccctgaagga
      601 aaggtcgatc gcagggctcg acggcttgag gtcctcggtg aggccgagga tgatctccgg
      661 caggccccgg aacttgagga acccgccgac gtcggtcgtg aggtcggcgg cgtcgagctc
      721 gctggtgccg atgttccggt acaccgtcga gtgccagatg acgttggcgt agagcgccag
      781 cggccccgcc acccggcccc gcagtccctg cgcgatcagc acgaacgccg accgctggaa
      841 ttccgcgagg cggccgtggg tgggggtaac cccgaatccc agtgatccct cgtaggtgaa
      901 tcgcttcccg aaatcgcttc gcagcatcgt cacggcgttc accgaggcgg tgccgcgccc
      961 gtagccctcg ggtccggttc cggtcggcag cgtcgcggaa acgaccgtc
//
LOCUS       DATIFF010000721         1762 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1014806, whole genome shotgun sequence.
ACCESSION   DATIFF010000721 DATIFF010000000
VERSION     DATIFF010000721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1762
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1014806"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..210
                     /locus_tag="VLD58_10640"
     CDS             <1..210
                     /locus_tag="VLD58_10640"
                     /inference="COORDINATES: protein motif:HMM:NF014845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="V4R domain-containing protein"
                     /protein_id="HSB54807.1"
                     /translation="YPSCHLSSGALAEFLSRVSESTLGVMEVECRSRGDARCRFLAGS
                     PETLTILYGRMAEGTSYLEALGVTG"
     gene            220..375
                     /locus_tag="VLD58_10645"
     CDS             220..375
                     /locus_tag="VLD58_10645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54808.1"
                     /translation="MAYNVRHSKSVDHEPAQGAQRKLNLLREVGAWALGLVVMYLVYW
                     LARHFLF"
     gene            complement(372..1661)
                     /locus_tag="VLD58_10650"
     CDS             complement(372..1661)
                     /locus_tag="VLD58_10650"
                     /inference="COORDINATES: protein motif:HMM:NF039907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HSB54809.1"
                     /translation="MIGPLLERAGRLASQADAALKRDETTTLTFRDGRLQVAATSYSW
                     GVNLRVVVDGRLGVAGTSSEDIAPLLDAALSSARVGEAVTLSLPRQGIAPRVLTLSPR
                     AAAATLADLTALGTMVRDRLAGTGAQLAIEIERSLGSVRVGNSLGLDAGYDVTLFSLA
                     VEAWHLRNGRRVTVRDRRAGSDLPDLPEIERLVASVRQRLAWCDREAEAPVGRMRVAF
                     MPAAVPLLLQPVEQALVGKTAVEGGIPFGGPRRGRVFSESITLLDDPLAPGRPASRPV
                     DDEGVVSRPVTLVQAGTIESLIYDLETACRVGATPTGHGRRSTFAKPQPAFSNLVLEP
                     GTASWEELLAAVGDGLLLDAVGGTWDGNVIGGAFSRPAELAWRVSGGEVQGLVAEVTV
                     AGNANDLLGRVVAQGKDAAWVGSRSAPTVVVDGVSVF"
BASE COUNT          265 a          652 c          592 g          253 t
ORIGIN      
        1 tacccgtcct gtcatctgtc gtccggcgcc ctggccgagt tcttgagccg ggtctcggag
       61 agcaccctcg gcgtcatgga ggtggagtgc cgctcgcggg gggacgcgcg ctgccggttt
      121 ctggccgggt cgcccgaaac gctcacgatc ctctatggcc gcatggcgga gggaacgagc
      181 tacctcgagg ccctcggcgt cacggggtga ccgcgagcca tggcctacaa cgtccgccac
      241 agcaagtccg tcgatcacga gcccgcgcag ggcgcgcagc gcaagctcaa cctgctccgt
      301 gaagtgggag cctgggcgct cggcctggtg gtgatgtacc tggtctactg gctggcgcga
      361 cacttcctct tctagaacac cgacaccccg tcaaccacca ccgtcggagc cgaccggctg
      421 cccacccagg cggcgtcctt cccctgtgcc acgacccgcc caagcaggtc gttggcattg
      481 ccggccacgg tcacctcggc caccagtccc tgcacttctc cccccgacac tcgccaggcc
      541 agctccgccg gccggctgaa cgcgccgccg atgacgttgc cgtcccaggt ccctcccacc
      601 gcgtcgagca gcaggccgtc acccaccgcc gcgagcagtt cctcccacga cgccgttccc
      661 ggctccagca ccaggttgga gaacgccggc tgcggcttgg cgaacgtgga gcggcggccg
      721 tggccggttg gagtggcacc aacccggcag gcggtttcca gatcgtagat cagcgactcg
      781 atggtcccgg cctgcaccag cgtgaccggt cgactcacca ccccctcatc gtccaccggt
      841 cttgaggcag gccgtcccgg agccagcggg tcatccagca atgtgatcga ttcactgaac
      901 acccggccgc gccgggggcc cccgaacgga atgccgccct ccacggccgt cttcccgacc
      961 agcgcctgtt ccacgggctg cagcagcagc gggactgcgg caggcatgaa ggccacccgc
     1021 atgcggccga ccggggcttc cgcctcccgg tcgcaccacg ccagacgttg tcgcacgctt
     1081 gcgaccagcc gctcgatctc ggggagatcg gggagatcgg agcctgcccg ccgatcccgg
     1141 accgtgactc gccgcccatt gcggaggtgc caggcttcga ccgccaggct gaacagggtg
     1201 acatcgtaac cggcatccag gccgaggctg ttgccgactc gaacggagcc gaggctcctt
     1261 tcgatctcga tggcgagctg tgcccccgtg ccagccagcc ggtcgcgcac catggtgccg
     1321 agcgcggtca ggtcggccag ggtggccgcc gcggctcgtg gagaaagggt cagcacccgg
     1381 ggcgctatcc cctgcctggg caggctcagg gtgacggcct ctccgacccg cgcggacgag
     1441 agagcggcat cgaggagcgg ggcgatgtcc tccgaggagg ttccggccac gccgaggcgg
     1501 ccgtccacca cgacacgaag gttgacgccc caggagtagc tggttgccgc cacctggagg
     1561 cggccgtccc ggaaggtcag cgtggtcgtt tcatcgcgct tgagcgcggc atcggcctgg
     1621 gaggccaggc gacccgcccg ttcgagcagc ggtccgatca cgccaggtct ccaccgacgg
     1681 tgaccccgtc gatccgcagg tggggtgcgc cctcggcgac gggcaccgag ccgctgcagg
     1741 ggcgggagca gccgctggcc ag
//
LOCUS       DATIFF010000722         1534 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_552479, whole genome shotgun sequence.
ACCESSION   DATIFF010000722 DATIFF010000000
VERSION     DATIFF010000722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1534
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_552479"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            21..>1534
                     /locus_tag="VLD58_10655"
     CDS             21..>1534
                     /locus_tag="VLD58_10655"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB54810.1"
                     /translation="MNEAVLSDAVWRSRFAADPAVLGSSVLIEGRPTTIVGILATGFR
                     FPDLVPDNVSIPSREPDIYLPAGQSPDDLAGRGNSNFWMVGRLAPGATLAAAQSELTT
                     IATTLRERFPAEYQDQTFGVAPLKSEIVGSAERPLLVLLGAVGLVLLIACANVSGLLL
                     ARTASREREFALRTALGAAPLGLVRQLLTESLLLGLVGGGLGALFGGWSIDLIRALAP
                     NTIPRIDGVTVDTRVLGFAIGISLLSGVLFGLSPALSGLRRAPASALHDGNRTSGGRA
                     GLRRILVIAEVALSVVLLSGAGLLLRSLASVLRADAGFDGHNVLTLLTVLPSSRYGSE
                     ASQASYVRAALARLREIPDVEAAGVVNTVPLSNLGGSTWIRIPGQSEDGPPVSIPYRT
                     VAGSYFEALRLQLATGRNFTEQDGPGAPSVAMLSETAVRQLFGDADPLGRQVQLGSDP
                     GPRTVVGVVRDVRDVALDQPPPAMVYYPFTQKPEAVFTLVVRTGHDPRPSLLAIR"
BASE COUNT          191 a          540 c          530 g          273 t
ORIGIN      
        1 gctccgatat tccggggaag gtgaacgaag cggtgttgag cgacgcggtc tggcgaagca
       61 ggttcgccgc cgaccccgcg gtgctcggga gcagcgtcct catcgagggc cggcccacca
      121 ccatcgtcgg cattctggcg accgggttcc gcttccccga tctggtgccg gacaacgtct
      181 cgattccttc gcgcgagccc gacatctacc tcccggccgg gcagagcccc gacgatctgg
      241 cggggcgggg caactccaat ttctggatgg tgggtcgcct tgcgccgggg gccacgctgg
      301 ccgcggccca gtcggagctc accaccatcg ccacgacgct gcgggagcgg tttccggcgg
      361 agtatcagga ccagaccttc ggagtggcgc cactcaagag cgagattgtc ggttcggccg
      421 agcgccccct cctggtgctc ctcggcgcgg tgggcctggt cctgctcatc gcctgcgcca
      481 acgtctccgg ccttctcctg gcccgcaccg cctcccggga gcgggagttt gccctccgca
      541 ctgcgctggg tgccgcccct ctgggcctgg tgcgccagct tctcaccgag tcgctgctcc
      601 tcgggctggt cggtggcgga ctcggcgcct tgttcggtgg ctggagtatc gacctcatcc
      661 gggcgctcgc gcccaacacc atcccgcgta tcgatggcgt caccgtcgat acccgtgtcc
      721 tcggctttgc gataggaatc tcgctcttga gcggagtgct gttcgggctc tcaccggccc
      781 tgtccgggct gcggcgtgct ccggcgagcg ccctgcacga cgggaatcgc accagcggtg
      841 ggcgggccgg cctccgccgt atcctggtga tcgccgaagt ggccctgtct gtcgtcctgc
      901 tgagcggcgc gggactgctg ctccggagcc tggccagcgt gctgcgggcc gatgccgggt
      961 tcgacggcca caacgtcctc accctgctca cggtactccc ttcttcccgg tacggcagtg
     1021 aggcgagcca ggccagctac gtgcgcgctg cgctggcccg cctgcgggag attcccgacg
     1081 ttgaggctgc gggcgtcgtg aacaccgtgc cgctcagtaa tcttggcggc agtacctgga
     1141 tccgtatccc ggggcagtcg gaggacgggc caccggtctc gatcccgtac cgcaccgtgg
     1201 cgggctcgta cttcgaggcg ctccggctgc agctcgccac cgggcggaac ttcaccgagc
     1261 aggatggtcc cggcgcgccg tcggttgcca tgctgagcga gaccgccgtg cgccagctct
     1321 tcggcgacgc tgacccgttg gggaggcagg tccagctggg aagtgacccc gggccgagga
     1381 cggtcgtcgg cgtggtgcgc gatgtgcgcg atgtggcgct ggatcagccg cccccagcca
     1441 tggtctacta cccgtttacc caaaagccgg aagcggtgtt cacgctggtg gtgcgcaccg
     1501 ggcatgatcc gcggccctcg ctgctcgcga tccg
//
LOCUS       DATIFF010000723         1604 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_398099, whole genome shotgun sequence.
ACCESSION   DATIFF010000723 DATIFF010000000
VERSION     DATIFF010000723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1604
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_398099"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1110)
                     /gene="kdpA"
                     /locus_tag="VLD58_10660"
     CDS             complement(<1..1110)
                     /gene="kdpA"
                     /locus_tag="VLD58_10660"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HSB54811.1"
                     /translation="MTANGWLQIALFALLVLAVAQPLGRYLVAAYEGRLRWLAPVERL
                     LYRLAGVDPEEDQHWTVYAGAMLCFSAATMLLTYLALRLQHLLPLNPQGFPAVSERQA
                     FETAASFTTNTNWQSYAGESTMSYFSQMTQLAFHNFVSASVGMALAVALVRGIARRSA
                     GRLGNFWADLVRGTLYVLLPLSVVLALILVQQGAIQNFRSYLQVTTLEGARQIIAMGP
                     VASQEAIKQLGTNGGGFFNANAAHPFENPTPWSNLWSMVAIFAIPSALTWLLGRMTGS
                     QRHGWAVWTAMFALFLAGAGVTYWAEARGNPIHAARGVDLVATATSPGGNMEGKEVRF
                     GVAGSALYAVVTTDASCGAVNAMHDSFTPLGGLVPL"
     gene            complement(1112..1201)
                     /gene="kdpF"
                     /locus_tag="VLD58_10665"
     CDS             complement(1112..1201)
                     /gene="kdpF"
                     /locus_tag="VLD58_10665"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
                     /protein_id="HSB54812.1"
                     /translation="MSTDSLVGGVIAVGLLIYLMYTLLRPEKF"
BASE COUNT          270 a          535 c          585 g          214 t
ORIGIN      
        1 cagcggcacc agtccgccga gcggcgtgaa cgagtcgtgc atcgcgttga ctgcgccgca
       61 cgacgcgtcg gtggtgacca cggcgtagag ggcgctgccg gcgacgccga agcggacctc
      121 cttgccctcc atgttgccac cggggctggt ggcggtggcg accaggtcca ccccgcgggc
      181 ggcatggatc gggttgcccc gcgcctcggc ccagtaggtg accccggccc cggcgaggaa
      241 cagcgcgaac atggcggtcc agaccgccca gccgtgccgc tggctcccgg tcatccggcc
      301 caggagccag gtgagcgccg aggggatggc gaagatcgcg accatggacc agaggttgga
      361 ccagggcgtc gggttctcga acgggtgggc ggcgttggcg ttgaagaagc cgccgccgtt
      421 ggtccccagc tgcttgatcg cttcctggct cgccaccggg cccatggcga tgatctggcg
      481 ggccccctcg agggtggtca cctgcaggta ggaccggaag ttctggatcg cgccctgctg
      541 gaccaggatc agcgccagca cgacggagag cgggaggagg acgtacagcg ttccccgcac
      601 caggtccgcc cagaagttgc ccagccggcc cgccgagcgg cgagcgatgc cgcgcaccag
      661 cgccaccgcc agggccatcc cgacagaggc ggagacgaag ttgtggaacg cgagctgggt
      721 catctgggag aagtacgaca tcgtcgactc ccccgcgtac gactgccagt tcgtgttggt
      781 cgtgaaggac gccgccgtct cgaacgcctg gcgctcgctc accgcgggga agccctgcgg
      841 gttgagcggg agcaggtgct ggagccggag cgcgagatag gtgagcagca tcgtggcggc
      901 gctgaagcac agcatcgcgc cggcatagac ggtccaatgc tggtcctcct cggggtccac
      961 tcccgccagc cggtagagga gccgttccac cggtgccagc cagcgcaggc gcccttcgta
     1021 cgccgcgacc aggtaccgcc ccagcggctg ggcgactgcc agcacgagga gggcgaacag
     1081 ggcgatctgg agccaaccgt tggccgtcat ctcagaactt ctccggccgc agcagggtgt
     1141 acatcaggta gatcaggagc cccaccgcga ttaccccgcc gaccagcgag tcggtactca
     1201 tgagtccggc tcggtgtcgg tccggcgacc cagggccgcg agcccacgca cgtaggcgag
     1261 catcgcggcg aagaacgcca gcgttcccag gacgtagcac aggtcgatca tggctgggac
     1321 gatagggcct cccgcctcaa gggggtgtcc ggaccctccc cggggatatc aggaacgcat
     1381 caagagaccc gcgcgtcggg ctgcgataca ttccggggga gtgccgggcg gccaggggcg
     1441 tcctcgaacg gagcgagcgg gtcatgcgag cagtgatcta cgacggagcc ggtggtcccg
     1501 aggtcatcac ccagggcgaa gtgcccaacc cggaggtgca tcccgggtac atccgggtgc
     1561 gggtgcgggc cgccgggctc aaccgggccg acctgctgca gcgg
//
LOCUS       DATIFF010000724         1117 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2244412, whole genome shotgun sequence.
ACCESSION   DATIFF010000724 DATIFF010000000
VERSION     DATIFF010000724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2244412"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..690
                     /locus_tag="VLD58_10670"
     CDS             <1..690
                     /locus_tag="VLD58_10670"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014414.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSB54813.1"
                     /translation="WGTLVGYMAEKFGADATGVTLATRQAEFGTERIAKKGLEDKARI
                     LTLDYRDIPRQKWNKITVLEMAEHVGIRKFQTFMRQLNGMLEEDGILFLQIAGLRRNW
                     TPEDFTWGMFMSKYVFPGADASMPLSFVCNNLERAGFEIHSVENIGIHYSLTIDRWYR
                     NWLSNRDNVVKGYGERWFRLWEIFLAWSVIIAERGGSTAFQLVCNKNRSSFDRKRWIG
                     ERGRLVDIRKS"
     gene            783..>1117
                     /locus_tag="VLD58_10675"
     CDS             783..>1117
                     /locus_tag="VLD58_10675"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSB54814.1"
                     /translation="MDDLRPASRLGIAAAAALLSEPARVSIVSALMDGQARPATELAR
                     IARVSPSTGSEHLALLTRGGLLRVEQQGRHRYHRLASDAVARAFESLSLLTRRPVRPA
                     SADPEDAAFR"
BASE COUNT          183 a          385 c          387 g          162 t
ORIGIN      
        1 tggggcaccc tggtcgggta catggccgag aagttcggcg cggacgccac cggcgtcacc
       61 ctggccacgc ggcaggccga gttcggcacc gagcggatcg cgaagaaggg gctcgaggac
      121 aaggcacgca tcctgaccct cgactaccgc gacatccccc gccagaagtg gaacaagatc
      181 accgtgctgg agatggccga gcacgtcggc atccggaagt tccagacgtt catgcggcag
      241 ctgaacggaa tgctggagga ggacggcatc ctgttcctcc agatcgccgg tctgcgccgc
      301 aactggacgc ccgaggactt cacctggggc atgttcatgt cgaagtacgt gttccccggc
      361 gccgacgcct cgatgcccct gagcttcgtg tgcaacaacc tggagcgggc gggcttcgag
      421 atccacagcg tggagaacat cgggatccac tactcgctca ccatcgaccg ctggtaccgg
      481 aactggttga gcaaccgcga caacgtggtc aagggctacg gcgagcggtg gttccggctg
      541 tgggagatct tcctcgcctg gtcggtgatc atcgccgagc gcggcggctc caccgcgttc
      601 caactggtgt gcaacaagaa ccgctcctcc ttcgaccgga agcgctggat cggcgagcgg
      661 ggccggctgg tggacatccg gaagagctga gccagcgcgc cgcccgggtc tgcgggcggc
      721 cggggaacgt ttggtcacag accgaagcat cccgagggct ccggagatag cgttccggag
      781 ccatggatga tctccgtccc gcgagtcgcc tgggcatcgc cgccgccgcc gccctgctct
      841 ccgagccggc gcgggtctcg atcgtctccg ccctgatgga cggccaggcg cggccggcga
      901 ccgagctggc ccgcatcgcc agggtctcgc cgtcgaccgg aagcgagcac ctggcgctgc
      961 tgacccgcgg cgggctcctc cgggtcgagc agcaaggacg ccaccggtac caccggctgg
     1021 cgagcgacgc ggtcgccagg gcgttcgaga gcctctccct cctcacccgg cggccggtcc
     1081 gccccgcgag cgcggacccg gaggacgcgg cgttccg
//
LOCUS       DATIFF010000725         9696 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_552659, whole genome shotgun sequence.
ACCESSION   DATIFF010000725 DATIFF010000000
VERSION     DATIFF010000725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9696
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_552659"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(114..1616)
                     /gene="trpE"
                     /locus_tag="VLD58_10680"
     CDS             complement(114..1616)
                     /gene="trpE"
                     /locus_tag="VLD58_10680"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR00564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HSB54815.1"
                     /translation="MANGLSPDGLPQFLALAAQRPGMVPVTRQVVLDGDTPVSAFAKL
                     HRGRYGFLLESLEGGERWARYTFLSTDPREVYRYRGRTVERWTEREGWSTVTTDQAPL
                     DHMAATMRRYPPVSLPGLPRFTGGAVGYIGYDVIRTIERLPNAPSDDRDLPDAVIMVA
                     DTVLVLDNLYNRATIIANVEVEPGLDRATLESRYHAAVARIEEWLGRLARPSTLGALT
                     IVAPAPIPPASCSTPDERYRDSVNKIKEYITAGDTFQTVLSRRLELAAPDPFLTYRYL
                     RALNPAPYLYFLHCDDLHVVGSSPEVLLRVEDGELTVRPIAGTRPRGATPEEDQRLQA
                     ELEADPKERAEHLMLVDLGRNDVGRVAQFGSVRLTAFMTVERYSHVMHLVSEVRGTLR
                     PELDALAALGACFPAGTVSGAPKIRAMEIIDELEPVRRGPYAGAVGYLAWGARTLDTA
                     IAIRTVVMRGDRAWVQAGGGIVADSDPAAEFRETEAKARAVLSALGLAGG"
     gene            complement(1718..2311)
                     /locus_tag="VLD58_10685"
     CDS             complement(1718..2311)
                     /locus_tag="VLD58_10685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54816.1"
                     /translation="MIHSIRVRLAAVATFAALGLGCGGSAQPATAPDPRIPKVVLPTS
                     RLFVLEMSGIPPEDSIVTFAVTQPRVIILRHGAPDNTVFAELTFPDSVFWSEGGPDSV
                     TVVVRARPGIYAMDLAMTVIPNRGALIKFKYPVHFSAPREAVERYGSPGRFEQALSVG
                     MLADGTNYALLPSLRPASDNLESALPGPGTYVVTAPR"
     gene            2310..4349
                     /locus_tag="VLD58_10690"
     CDS             2310..4349
                     /locus_tag="VLD58_10690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54817.1"
                     /translation="MRWHLAGTGLLLTIGASPLSGQAWNDSTVLALVERGITAREQAR
                     PDSALASYSAQAHGFVFFLGQAGRDLEGTPRLIKADELEVEVYWRAPGTSKQVILGWR
                     DGRWLPTDINYHRDHLGVVTNNFGDRIRIGDGDEVKDVPHPLAPDGPALYDYRLGDSV
                     RMRGRGGEPLLVQEVEVRPRSLDSARVVGTLSLDVATGDLLRFRFSFTPSAYLDSSLE
                     DISITLESARVERWWLPSRQEIEIRRRVSWFDFPARSIIRGRWEIGNYDLNPAIPSSA
                     LRGPSIGGLRRPDPRGYAWSAPLADLVREQATPVEKQDLEQVRSEIQSIVEGRMLNGL
                     PRARPGVTSLSDLAHVNRVQGLALGFGAGIRALPRVMLRPRIGFGTSDERLTGDLTAT
                     WEKGGSVVTLYGGRRLADLEDEPRRSTLANSLLAQEGGRDLGDYVRLDRVSLGGAFRR
                     SPAVTLRLEAGLEWTHSVSTEASPARGSYRPNPPLGIGRIGVGRIGFRYASPRLDRNA
                     GAWLAGSFEGGTGAAEYGRVNLTGALERPAGPGTFRLRLEGGAGTEQLPPYRSFAVGG
                     WGTLLGEPFRAWGGRRYGLGKVAYGLPVPFPALPLGAFVSTGNRLTVAPFVAVGWAGA
                     RVTGMPWVPSAKVRPVAGLGLEWFHGLIRFEGGASLRTGKVGFSLDVAPEWWDIL"
     gene            4524..6842
                     /locus_tag="VLD58_10695"
     CDS             4524..6842
                     /locus_tag="VLD58_10695"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system protein"
                     /protein_id="HSB54818.1"
                     /translation="MQFTDEWLVPTLEKVLPAEALEALRQEPSEQPQSLWLTAVQRKL
                     STDDAILRAAAARFRLPLAELTAIDPRAKDAVPEPLVRRYNILPIRQTDSVLEIATAN
                     PFDIDAEKDLAFATGREVRIYLCSPGRIREKMDEIYRGTTSEDVVNQLLGGMDERLEV
                     TQLESEEEELADLAASADEAAQRPVVRLVDLMLSDGILSRASDIHVEPGEGGVAVRYR
                     IDGVLRQVMNIPRTAGAPMISRIKIMSGLDIADRLRPQDGRARVAVNGQPVDLRVSTL
                     PASLGEKVVIRILNARATVLTLESLGMSPDERLTIENLLNNKEGVILVTGPTGSGKTT
                     TLYSMLRIVQDEGVNIVTVEDPVEYRLGKGIVQVQVHEKAGLTFAAALRSILRQDPDV
                     VLVGEIRDRETAQIAVQASLTGHLVLSTLHTNDAPNAVTRLTDMGIEAYKLGSALRGV
                     LAQRLMRRICSTCKEISTAAPPERLRRYIPAGSQIVRPVGCPDCSMTGYRGRFSVVEV
                     LTMNTDLEKLIGAGATADKIADAARANGMLSLFESGLRHVLAGETSVEELLRVVDVPV
                     ADGAVAGRLSVPGSAPVKEAPPAPAPAQPQRRTPPSTPAPAAAAPLVERRERPAAVVP
                     DLTNAFELIEEEAVVEEPARRGATRGQTVLLVDDEEFLRRVMKDLLVREGYEVVEAGT
                     GIEALDQVDRHAPDVVVLDLNLPGMDGYSVLSELRSRPATRNIPVVVLTAKGDEDNEV
                     RVFELGADDFLTKPFRAKALSKRLEVVLGRRR"
     gene            6859..7971
                     /gene="hisC"
                     /locus_tag="VLD58_10700"
     CDS             6859..7971
                     /gene="hisC"
                     /locus_tag="VLD58_10700"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HSB54819.1"
                     /translation="MPLPDSTPALALIKASVRSQAAYSLEQPVTARKLNQNEAPSDLP
                     AELKREVLARAAALPWHRYPAFVPTHLTAIVAARHDWVPEGVLVGNGSNEVIQAALAV
                     SLGEGDAVVAPAPTFSLYRLLAGIMGARYLGVPLATDFSYDVDALIAEAKRSHARVMV
                     LNSPNNPTGSALPADAVERCLAETQALILCYEAYQEFGGPSAVPLLHRSPRVVVLRTF
                     SKAMGLAGLRFGYALAHPDIAREIAKAKLPYNVNAITLAAAEVAFEHAEFFEGRTRRV
                     IAERERFIQAARQIPGLRVFPSAANFVLLRMETVPASEVFRRIRDEFGILIRDVSHSA
                     GLSECLRVSVGEREDMDAVVNALTTIMAGRPAGVSA"
     gene            7986..8576
                     /gene="hisB"
                     /locus_tag="VLD58_10705"
     CDS             7986..8576
                     /gene="hisB"
                     /locus_tag="VLD58_10705"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF002111.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HSB54820.1"
                     /translation="MPRTAEINRETRETRIRLRLDLDGSGKADIRTGIGFFDHMLEAF
                     ARHGLNDLTVDAKGDLQVDGHHTVEDVGIVLGQAIAQALGNRAGIRRYADASVPLDEA
                     LVRAVVDVSGRPYLSYHVDSPKWQMLGDYDVLLTPEFFRAVVLNAGLTVHLDLIRGEN
                     PHHVVEATFKAFARALEAATRLDPRVIGVPSTKGVL"
     gene            8573..9193
                     /gene="hisH"
                     /locus_tag="VLD58_10710"
     CDS             8573..9193
                     /gene="hisH"
                     /locus_tag="VLD58_10710"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR01855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HSB54821.1"
                     /translation="MIVVVDYDVNNLRSVVRALKAGGTTAELSRDPEVVRRAERVLVP
                     GVGNFGQAEKNLRSSGLGQAVQEVAKAGRPVMGICLGMQLFFEGSEEAPSARGLGLLP
                     GTVQRFRTSLPVPHVGWASVTLSASGEDHPVLAPLFHGVPQYFYHVHSYHPANLVKGE
                     ELATADYDGLFPTIVGQDNVIGVQFHPEKSQRVGIDLLARFVEWTP"
     gene            9190..9654
                     /locus_tag="VLD58_10715"
     CDS             9190..9654
                     /locus_tag="VLD58_10715"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HSB54822.1"
                     /translation="MTTFRVAFVDVYVLRFGPVGLEVLALRRSAAGRCPGSWEVVHGS
                     IEAGETPVAAALREMREETGLAPSRLYNLSRVESFYRHRTDEIGFIPVFAALTESAEV
                     RVSDEHDACEWLPLAAASGRLSWPRERRGLEDIAILLAKGDAGRLEDVLRAE"
BASE COUNT         1482 a         3304 c         3373 g         1537 t
ORIGIN      
        1 tacgccccgc tccgtgttcc cctcggccct cgcgctccgc gaccttcgcc ttgccgcctt
       61 gccgccttgc cgccttgccg ccttgccgcc ttgccgcctt gccgccttgc cccctatccc
      121 cccgccagcc ccagcgccga caacaccgcc cgggccttcg cctcggtctc ccgaaactcc
      181 gccgccgggt cggaatccgc cacgatccct ccgccggctt gcacccaggc gcggtctccc
      241 cgcatcacca cggtccggat ggcgatggcg gtatccaggg tccgggcccc ccaggcgagg
      301 tatccaaccg ccccggcgta gggaccgcgg cgcaccggct ccagttcgtc gatgatttcc
      361 atcgcccgga tcttgggggc gccgctgacc gtgccggcag ggaagcaggc gccgagcgcg
      421 gccagcgcat cgagctcggg gcgcagggtc ccgcgaacct cgctcaccag gtgcatcacg
      481 tgggaatacc gctccaccgt catgaatgcg gtgagccgca cgctgccgaa ctgcgccacc
      541 cggcctacat cgttccgtcc gaggtcgacc agcatcaggt gctcggcccg ttccttcgga
      601 tcggcctcga gctcggcctg gagccgctgg tcctcctcgg gcgtcgcccc gcggggccga
      661 gtgccggcaa tgggacggac ggtgagttcc ccgtcttcca cccgcagcag gacttccggc
      721 gaactcccca ctacatgcag gtcgtcacag tggaggaagt agagatacgg tgccggattg
      781 agggcccgga gatagcgata ggtgaggaag ggatccggcg cggcgagctc gagcctgcgg
      841 gagagcaccg tctggaaggt atcgcccgcg gtgatgtact ccttgatctt gttgacgctg
      901 tcccggtaac gctcatcggg cgtggagcag ctggccggcg ggatcggcgc gggcgccacg
      961 atggtcaatg cgcccagggt cgagggccgc gccagccggc cgagccactc ttcgatgcgc
     1021 gctaccgcgg cgtgatagcg ggattcgagc gtggcccgat ccaggcctgg ttcgacctcg
     1081 acgttcgcga tgatcgtggc gcggttgtag agattgtcga gcaccaggac cgtgtcggcc
     1141 accatgatga ccgcatcggg cagatcgcgg tcgtcactcg gagcattcgg gagccgctcg
     1201 atggtccgga tgacgtcata cccgatgtac ccgacggcgc cgccggtgaa gcggggcagc
     1261 cccggcaggg aaaccggggg gtagcgacgc atcgtcgcgg ccatgtggtc cagcggcgcc
     1321 tggtcggtgg tgacggtgct ccatccctcg cgctcggtcc agcgctccac cgtgcggccg
     1381 cgatagcggt acacctcgcg cgggtcggtc gagaggaagg tgtagcgggc ccagcgttct
     1441 cctccctcga gcgactcgag cagaaagccg tagcgtcccc ggtgcagctt ggcgaacgcg
     1501 gagaccgggg tgtcgccatc gagcacgacc tggcgggtga cgggcaccat gccgggccgc
     1561 tgggcggcga gggcaaggaa ctgagggagg ccgtcgggcg agaggccgtt agccattagc
     1621 cataagccgt tagctgatag gtgatatttc gagagcggcg cgaaaggtaa cccggcagag
     1681 aacccctaac ggctaatggc taacggctaa cggccggcta tctcggcgcc gtcaccacat
     1741 acgtccccgg accaggcagc gccgattcga ggttgtccga ggcgggacgg agcgagggga
     1801 gcagcgcata gttggttcca tcggccagca tcccgactga cagcgcctgc tcgaatcgcc
     1861 ccgggctgcc gtagcgctcc accgcctcgc gcggggcgga gaagtgcacc ggatacttga
     1921 acttgatcag ggcgccgcga ttggggatca cggtcatcgc gagatccatc gcgtagatcc
     1981 ccggacgggc gcgcaccacg accgtgaccg aatcgggccc gccctcgctc cagaacaccg
     2041 agtcggggaa ggtgagttcc gcaaacacgg tgttgtccgg tgcgccgtgc cgcagaatga
     2101 tcacccgcgg ctgggtcacc gcgaatgtca cgatcgagtc ctcgggcggg atgcccgaca
     2161 tttccagcac gaagagccgg ctggtcggga gcacgacctt ggggatccgg ggatcgggtg
     2221 cggtggccgg ctgcgcgctc ccgccgcatc ccagccccag tgccgcgaag gttgccactg
     2281 cggcaaggcg gaccctaatt gagtggatca tgcgctggca tctggcggga accgggctct
     2341 tgctcacgat cggggcgtcg cctctcagcg gacaggcctg gaacgacagt acggtactcg
     2401 cgctggtcga acggggcatc acggcccgcg aacaggcccg ccccgacagc gccctggcaa
     2461 gctacagcgc ccaggcgcac ggtttcgtgt tcttcctggg ccaggccggc cgggacctcg
     2521 agggaacacc ccggctgatc aaggccgacg agctcgaggt cgaagtgtat tggcgtgccc
     2581 cgggcaccag caagcaggtg atcctcggtt ggcgcgacgg ccgctggtta cccaccgaca
     2641 tcaactacca ccgcgatcat ctcggcgtcg tcaccaacaa tttcggcgac cggatccgga
     2701 tcggcgatgg cgacgaagtg aaggacgtcc cccacccgct cgcgcccgac ggcccggcgc
     2761 tctacgacta ccggctgggc gattcggtgc ggatgcgggg ccggggcggt gaaccgctgc
     2821 tggtgcagga ggtcgaggtc cggccccgct cgctcgactc ggcccgggtg gtgggaaccc
     2881 tctcgctcga cgtcgcgacc ggcgacctgc tccgcttccg gttcagcttc acgccgagcg
     2941 cttatctcga ctcgtcgctc gaggatatca gcatcaccct cgagagtgcc cgggtggagc
     3001 ggtggtggct cccctcgcgc caggagatcg agatccgccg gcgggtgagc tggttcgact
     3061 tcccggcccg ttcgatcatc cggggacgct gggagatcgg caattacgac ctgaatccag
     3121 ccatcccctc gagcgcgctc cgcggcccgt ccatcggcgg gctgcggcgc cccgatccgc
     3181 ggggctacgc ctggtctgcc ccactggccg acctggtgcg cgagcaggcg accccggtgg
     3241 agaagcagga tctcgagcag gtgcgcagcg agatccagtc gatcgtcgaa gggcggatgc
     3301 tcaatgggct cccccgcgcc cggccagggg tgacgtcgct gagcgatctc gcccatgtga
     3361 accgggtgca gggcctcgcg ctcggcttcg gggccgggat ccgggccctg ccgcgagtga
     3421 tgctccgtcc caggatcggg ttcggaacct ccgacgaacg cctcaccggc gacctcaccg
     3481 ctacctggga gaaaggtggg tcggtggtca cgttatatgg tggccgccga ctcgccgacc
     3541 tcgaggatga gccccgtcgt tccaccctgg ccaactccct gctggcgcag gaaggaggac
     3601 gcgacctggg cgactacgtc cggctcgacc gggtctctct gggcggggcc ttccgccggt
     3661 caccggcggt gaccctgcgg ctcgaggcgg gtctcgagtg gacccattcg gtgagcaccg
     3721 aggcctcgcc cgcgcggggg tcataccgtc ccaacccgcc cctgggaatc ggccgtatcg
     3781 gggtcgggcg gatcggattt cgctatgcct cgccgcggct cgaccggaat gcgggcgcct
     3841 ggctcgccgg gagcttcgaa ggaggcaccg gtgcggcgga gtacggccgc gtgaatctga
     3901 cgggggcgtt ggaacggccg gcgggcccag gcaccttccg tctccgcctg gagggtgggg
     3961 cggggaccga gcaactccca ccatatcgga gctttgcggt aggtggctgg ggcactctcc
     4021 ttggggagcc cttccgggcc tggggcggcc gccgctacgg cctcggcaag gtggcctacg
     4081 gcctccccgt gcctttcccg gcgcttcccc tcggcgcatt cgtctcgacc gggaaccggc
     4141 tgacggtcgc cccattcgtg gcggtcgggt gggccggggc gagggtgacg ggcatgccct
     4201 gggtgccgag cgccaaggtt cggccagtgg ccgggttagg gctggagtgg ttccatgggc
     4261 tcatccggtt cgaggggggc gccagcctcc ggaccggcaa ggtggggttc agcctggacg
     4321 tcgcccccga gtggtgggac atcctctgag tcggtttggt gggctccggt tcgatccggc
     4381 aacggtcggg ccgcccaggt gcatataatt tctagccggc gaatagggcc tatggcccac
     4441 cgccccgggg caggctaggt ttaatcggtg gccagattgt ccccactttc gaacctctaa
     4501 gagcttcccc cgcaaacgtt tgcatgcagt tcacggacga gtggctggtt cccacactgg
     4561 aaaaggtgct gccggcggaa gccctcgagg ctctacggca ggaaccgtcg gagcagccac
     4621 agtccctgtg gctcacggcg gttcagcgga agctttccac tgacgatgcc attctccgtg
     4681 ccgcggcggc ccgattccgt cttccactcg cggaattgac ggcgatcgat ccgcgcgcca
     4741 aggacgcggt gccggagccg ctggtgaggc ggtacaacat actcccgatc cgccagaccg
     4801 attcggtgct ggagatcgcg accgccaacc ccttcgacat cgatgcggaa aaggacctcg
     4861 ccttcgccac cgggcgcgag gtgcggatct acctctgctc gccgggccgg atccgcgaga
     4921 agatggatga gatctaccgc ggcactacct ccgaggacgt ggtcaaccag ctcctcggcg
     4981 gcatggacga acggctcgag gtcacccagc tcgagagcga agaagaggaa ctggccgatc
     5041 tcgccgcctc agccgatgaa gcggcgcagc ggccggtggt ccgcctggtc gacctgatgc
     5101 tctccgacgg gattctctcc cgggcgagcg acatccacgt cgagccgggc gaagggggcg
     5161 tcgcggtccg ctaccgtatc gacggcgtgc tccggcaggt gatgaacatc ccgcgcaccg
     5221 ccggcgcccc catgatctcc cggatcaaga tcatgtcggg gctcgacatt gccgaccggc
     5281 tccggcccca ggacggccgc gcccgggtgg cggtgaacgg ccagccggtc gacctgcgcg
     5341 tctccaccct tcccgcctcc ctgggcgaga aggtggtgat ccggatcctg aatgcccgcg
     5401 cgaccgtgct cacgctcgag tcgctcggca tgtcgcccga cgaacggctc acgatcgaga
     5461 acctgctcaa caacaaggaa ggggtcatcc tcgtcaccgg gcccaccggc tcgggcaaga
     5521 ccaccacgct ctactccatg ctccgcatcg tgcaggacga gggcgtgaac atcgtgacgg
     5581 tggaagaccc ggtggaatac cggctgggca agggcatcgt gcaggtgcag gtccacgaga
     5641 aggcgggcct caccttcgcg gccgcgctcc gctcgatcct gcggcaggac cccgacgtgg
     5701 tgctggtggg cgagatccgc gaccgcgaaa ccgcacagat cgcggtgcag gcctcgctca
     5761 ccggtcacct ggtgctctcc accctgcaca ccaacgatgc ccccaacgcg gtcacccgtc
     5821 tgaccgacat gggcatcgag gcgtacaagc tgggctcggc cctccggggc gtgctggccc
     5881 agcggctgat gcggcggatc tgctcgacct gcaaggaaat cagcaccgcg gccccaccgg
     5941 agcggctgcg gcgctacata cccgccggat cccagattgt gcggccggtg ggctgccccg
     6001 actgctcgat gaccggctat cgcggccggt tcagcgtggt ggaagtgctc accatgaaca
     6061 ccgacctcga gaagctgatc ggtgcgggcg ccaccgccga caagatcgcg gacgcggccc
     6121 gcgccaatgg catgttgtcg ctgttcgaga gcggattgcg gcacgtgctc gcgggcgaga
     6181 ccagcgtcga ggaactgctc cgcgtggtgg atgtgccggt ggccgatggc gcggtggcgg
     6241 gccggctgtc ggtgcccggc tccgcgccgg tcaaggaagc cccacccgcg cccgctccgg
     6301 cgcagccaca gcgccgcacc ccaccttcga cgccggcccc tgccgccgcg gcgccgctcg
     6361 tggaacggcg ggagcgaccc gccgcggtcg tccccgacct gacaaacgcc ttcgagctga
     6421 tcgaggaaga ggcggtggtc gaggagcctg cccggcgggg cgcaacccgg ggccagaccg
     6481 tgctgctggt cgatgacgaa gaattcctcc gccgggtcat gaaggacctg ctggttcgtg
     6541 aaggctatga ggtggtcgag gcgggcaccg gtatcgaggc gctggaccag gtagaccggc
     6601 atgcgcccga tgtggtggtg ctcgacctca acctccccgg catggacggc tactcggtcc
     6661 tctccgagtt gcgctcccgt cccgccaccc ggaacattcc cgtcgtggtc ctcaccgcca
     6721 agggcgacga agacaacgag gtccgcgtgt tcgagctggg ggccgacgat ttcctgacca
     6781 aacccttccg cgccaaggcg ctctccaagc gcctcgaagt cgtgctgggg aggcggcggt
     6841 gaccccgggc caccattcat gccgcttccc gactcgactc ccgcgcttgc gctgatcaag
     6901 gcctccgtcc gttcccaggc agcctactcg ctggaacagc cggtcaccgc ccgcaagctc
     6961 aaccagaacg aagcgccctc cgatctcccc gccgagctca agcgggaagt gctggcgcgc
     7021 gcggccgcgc tcccctggca ccgctacccg gcgttcgtcc ccacccacct caccgcgatc
     7081 gtcgccgcca ggcacgactg ggtccctgag ggcgtgctgg tcgggaatgg ctccaacgag
     7141 gtgatccagg cggccctcgc cgtctcactg ggtgagggcg acgcggtggt ggcgccggcc
     7201 ccgaccttct cgctctaccg gctgctcgcg ggcatcatgg gcgcccgcta cctcggcgtg
     7261 ccgctggcca ccgatttcag ctacgacgtc gatgccctca ttgcggaggc gaagcgcagc
     7321 cacgcccggg tcatggtcct caattcgccc aacaatccca ccggctcggc gctgcctgcg
     7381 gatgcggtgg agcgctgtct ggccgagacc caggcgctga tcctttgcta cgaggcctac
     7441 caggagtttg gcgggccgag cgccgtgccg ctgctccacc gttctccccg cgtggtggtg
     7501 ctgcgcacct tctccaaggc catggggctc gcgggcctgc gcttcgggta cgccctggcc
     7561 caccccgata tcgcccggga aatcgccaag gcgaagctgc cgtacaacgt gaatgcgatc
     7621 accctggcgg ccgccgaggt cgcgttcgag cacgccgaat tcttcgaggg gcggacccgg
     7681 agggtgatcg cggagcggga acggttcatt caggccgccc gtcagatccc cggtctccgg
     7741 gtcttcccca gcgccgccaa cttcgtcctg ctccggatgg agacggtccc cgccagcgag
     7801 gtctttcgcc gcatccggga cgagttcggg attctgatcc gcgacgtgag ccacagcgcc
     7861 ggcctgtccg agtgtctccg ggtgtcggtc ggtgaacggg aggacatgga cgcggtggtg
     7921 aacgcgttga ccacgatcat ggcggggcgc cccgccggcg tttccgccta accagcacgg
     7981 acctcatgcc gcgtaccgcc gagatcaatc gcgagacccg cgagaccagg atccgcctcc
     8041 ggctcgacct ggacggctcg ggcaaggccg acatcaggac cgggatcggg ttcttcgacc
     8101 acatgctcga ggccttcgcc cgtcacgggc tcaatgatct cacggtcgac gccaaaggcg
     8161 atctccaggt cgacgggcat cacacggtcg aggatgtggg catcgtgctg ggccaggcca
     8221 tcgcgcaggc gctggggaac cgcgccggca tccgccgcta cgccgatgcc tcggtgccgc
     8281 tcgacgaggc gctggtgcgc gcggtggtgg atgtctcggg ccgcccctac ctctcgtatc
     8341 atgtcgattc ccccaagtgg cagatgctgg gcgactacga cgtgctcctc acgcccgagt
     8401 tcttccgggc ggtggtgctc aacgccggac tgacggtgca cctcgacctg atccggggcg
     8461 agaatcccca tcatgtcgtc gaggccacct tcaaggcctt cgcccgcgcc ctcgaagccg
     8521 ccactcggct cgacccgcgg gtgattgggg taccatcgac caagggtgtg ctgtgatcgt
     8581 cgtggtcgat tacgacgtga acaacctccg cagcgtggtg cgcgcgctca aggcgggcgg
     8641 cactacggcg gagctctccc gcgatccgga ggtggtgcgc cgggccgaac gggtgctggt
     8701 gcctggggta gggaacttcg gccaggccga gaagaacctg cggagcagcg ggctgggcca
     8761 ggcggtgcag gaggtggcga aggccggccg cccggtgatg gggatctgtc tcgggatgca
     8821 gctcttcttc gagggcagcg aagaggctcc cagcgccagg gggctcgggc tcctgccggg
     8881 cacggtgcag cggttccgga cttcgctgcc ggtgccccac gtggggtggg cctcggtgac
     8941 gctctcggcg agtggcgagg accatccggt gctggcgccg ctctttcatg gcgtgccgca
     9001 gtatttctac catgtgcaca gctatcaccc ggccaacctg gtgaagggtg aggagctggc
     9061 gaccgccgac tacgatggac tctttcccac gatcgtgggc caggacaacg tgatcggggt
     9121 gcagttccat cccgagaagt cgcagcgggt ggggatcgac ctgctggcgc ggttcgtcga
     9181 gtggacgccg tgaccacctt ccgggtggcg tttgtcgacg tctacgtgct gcggttcgga
     9241 ccggtggggc tcgaggtatt ggcgctccgc cgcagcgcgg cgggtcgctg tcccggctcg
     9301 tgggaagtgg tgcatggcag catcgaagcc ggcgagacgc cggtggccgc ggcgctccgt
     9361 gagatgcggg aggaaaccgg cctggcgccc tcccggcttt acaacctgag ccgggtcgag
     9421 tcgttctacc ggcaccgcac cgatgagatc gggtttatcc cggtcttcgc cgcgctcacc
     9481 gagagcgccg aggtgagggt gtcggacgag catgacgcct gcgagtggtt gccactggcc
     9541 gcggcgtcgg gccggctctc gtggccccgg gagcggcgcg ggctcgagga catcgccatc
     9601 ctgttggcga agggtgacgc ggggcggctc gaggatgtgc tgcgggcgga gtaacaacgt
     9661 gagaagtgag aagggagaag tgagaaggga gaaggg
//
LOCUS       DATIFF010000726         1278 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1169442, whole genome shotgun sequence.
ACCESSION   DATIFF010000726 DATIFF010000000
VERSION     DATIFF010000726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1278
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1169442"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..564)
                     /locus_tag="VLD58_10720"
     CDS             complement(<1..564)
                     /locus_tag="VLD58_10720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HSB54823.1"
                     /translation="MAEAPQGNPPPFNFKAAITQMVQRNGSDLLLKVGRPATVRVNGD
                     LVSLETQPLKPEELKSLAEQIMTPRQVKEFAEHKEADFAIGVPGVGRFRTNVYQQRGT
                     VAFAFRAIPYEVKTIQELNLPPVLEEIALRPRGLVLVTGVTGSGKSTCLAAMINHVNA
                     SRRVNIITIEDPIEFLHRDNLANISQRE"
     gene            complement(557..1048)
                     /gene="accB"
                     /locus_tag="VLD58_10725"
     CDS             complement(557..1048)
                     /gene="accB"
                     /locus_tag="VLD58_10725"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HSB54824.1"
                     /translation="MNLDLIGQLVKILRDTPELGAIEVRRGLLGLWSSVRVSKAGVPA
                     GNAGSVVVAAPAAVVPAAAASPAGAAPAAPSPAPAPPSALVEIKSPMVGTFYKAPEPG
                     AEPYVKVGTRVATGQVVCIIEAMKIMNEIEAEVQGAIREVCVENAQPVEFGQVLFRVD
                     PHG"
BASE COUNT          199 a          476 c          401 g          202 t
ORIGIN      
        1 ctcgcgctgc gagatgttgg ccagattgtc ccggtggagg aactcgatcg ggtcctcgat
       61 cgtgatgatg ttcacccgcc ggctcgcatt gacgtggttg atcatcgccg cgagacaggt
      121 ggacttcccc gagccggtca ccccggtcac cagcaccagc ccgcgcggcc gcagcgcgat
      181 ctcttccagt accggcggca ggttgagctc ctggatcgtc ttcacttcgt acgggatcgc
      241 ccggaacgcg aacgccaccg tgccgcgctg ctggtacacg ttggtccgga accggcccac
      301 ccccggcacg ccgatggcga aatccgcctc cttgtgctcg gcgaactcct taacctgccg
      361 cggcgtcatg atctgctcgg caagcgactt cagctcctcc ggcttcaggg gctgggtctc
      421 cagcgacacc agatccccgt tgacccgaac cgtcgccggc cggccgacct tgagcagcag
      481 gtccgagccg ttgcgctgga ccatctgcgt gatcgccgcc ttgaagttga acggcggcgg
      541 atttccctgc ggtgcctcag ccatgaggat ccacccggaa gaggacttgg ccgaattcga
      601 cgggctgcgc gttctcgacg cagacctcgc ggatcgcgcc ctgcacctcg gcctcgattt
      661 cgttcatgat cttcatcgcc tcgatgatgc acacgacctg ccccgtcgcg acgcgggtcc
      721 ccaccttcac gtagggctcc gcccccggtt ccggcgcctt gtagaacgtg cccaccatcg
      781 gcgacttgat ctcgaccagc gcactcggag gggccggcgc cggtgacggc gcggccggcg
      841 cggcaccggc gggcgacgcc gcagcagccg gcacgacggc cgccggggcc gcgacgacga
      901 ccgatccggc gttccccgcc ggcacgccgg ccttcgagac ccgcacggac gaccagagcc
      961 cgagcagacc gcggcgcacc tcgatcgccc ccagctccgg agtatcccgg aggattttga
     1021 ccagctgtcc gatgagatcc aggttcatgt cgtcacaggt cgtggcacga ggtccaaata
     1081 gaccacccgg ggaagcaatc cgtcaatgtg cggccccggc atcacaccag ctccgccagg
     1141 tcggtcgccc cgtcggacag gagcacgggc ccctcggccg ccaggtgaac gtcgtcctcc
     1201 aggcgcacgc cgccctgccc cggcaggtag atccccggct cgatcgtcac gacggcgtcg
     1261 acgggcagcg gctccgca
//
LOCUS       DATIFF010000727         1537 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1937956, whole genome shotgun sequence.
ACCESSION   DATIFF010000727 DATIFF010000000
VERSION     DATIFF010000727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1937956"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..329
                     /locus_tag="VLD58_10730"
     CDS             84..329
                     /locus_tag="VLD58_10730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54825.1"
                     /translation="MAGVQARVRSEHQRKYPDLNASEWYDVAPIFPGVTQRMVNMAGE
                     RLTRLSTPRGYQIIRADHLEFRPVTGDVTPGASAGRG"
     gene            complement(326..>1537)
                     /locus_tag="VLD58_10735"
     CDS             complement(326..>1537)
                     /locus_tag="VLD58_10735"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB54826.1"
                     /translation="RDVTERKRVEEHLRRAERMQAAGRLAGGVAHEVNNMMTGVIGFS
                     EFLLRSLEPDDPRRAEVSEIIKAGTRAADVTRQLLAFTRQQFLRPEVLSVNAVVQDLE
                     KMLRRVLGENHDLRLSLGAEAGQIRADRGQLEQVLVNLMLNARDAMAEHGRVTIATRV
                     ALLDEAYAQLHGGVGIPPGPYVQVTVSDTGSGMDRETQSRIFEPFFTTKPVGQGTGLG
                     LSTVYGIVKQSDGFIWVYSEPGLGTTFKVYLPQLGAARPAAGHDERAALAAGGSETIL
                     IVEDEDIVRSLASRGLRERGYNVLEARHGTEALRCLARDSGAVDLVISDVVMPEMGGR
                     ELSQQLAAIEPTLPVLFISGYTGEDVIQRGLLDPGAPFQQKPFAPEELARKVREMLDA
                     ARETRVRQTAG"
BASE COUNT          215 a          563 c          513 g          246 t
ORIGIN      
        1 ccgacgggtg ctcatggtag attgtcgaag tccctgaccc aacctgcacc gtttggccgg
       61 cttccgccgg caggggagga ccgatggccg gcgttcaggc tcgcgtgcgg tccgagcacc
      121 agcggaagta tcccgacctc aatgcctccg agtggtatga cgtggcgccg atctttccgg
      181 gggtaacgca gcggatggtc aacatggcgg gtgagcggct gacccggctc tccacgccgc
      241 gtggctacca gatcatccgg gccgaccacc tcgagttccg gccggtgacg ggggacgtga
      301 ctcccggcgc gtcggccggg cggggctagc cggcggtctg cctcacccgg gtctcccggg
      361 ccgcgtcgag catctcccgg accttccgcg ccagctcctc gggggcgaac ggcttctgct
      421 ggaagggcgc ccccggatcc agcagacccc gctggatgac gtcttccccc gtataccctg
      481 agatgaagag caccggcagc gtcggctcga tggcagcgag ctgctggctc agctcccgcc
      541 cacccatctc gggcatgacg acatccgaga tgaccaggtc caccgccccc gagtcccgcg
      601 ccagacagcg cagggcctcg gtgccgtggc gggcctcgag gacgttgtag cctcgctcgc
      661 gcaggccacg gctggccagc gaccgcacga tgtcctcgtc ctcgacgatc agaatggtct
      721 ccgagcctcc cgccgccagc gcagcacgct cgtcgtggcc ggccgcgggc cgcgccgcac
      781 cgagctgcgg caggtacacc ttgaaggtgg tgccgagccc cggctcgctg tacacccaga
      841 tgaacccgtc gctctgcttc acgatgccgt agaccgtgga gagccccagc ccggtgccct
      901 ggccgacggg cttggtggtg aagaacggct cgaagatccg ggactgggtc tcgcggtcca
      961 tgccgctccc ggtgtcgctg acggtgacct gaacgtacgg tcccggggga atgcccaccc
     1021 cgccgtgaag ctgcgcatac gcctcgtcga gcagggcgac acgggtcgcg atcgtcaccc
     1081 gtccgtgctc cgccatcgcg tcccgggcgt tgagcatcag gttcacgagc acctgctcga
     1141 gctggccgcg gtcggcccgg atctgtcccg cctccgcccc gagtgacagc cgcagatcgt
     1201 ggttctcccc caggacccgg cgcagcatct tctcgaggtc ctggacgacg gcgttgaccg
     1261 acagcacctc cgggcggagg aactgctggc gcgtgaatgc cagcagttgg cgggtcacgt
     1321 cggctgcgcg ggtgcccgcc ttgatgatct cgctgacctc ggcgcggcgc gggtcgtcgg
     1381 gctccaggct ccggagcagg aactcgctga acccgatgac gcccgtcatc atgttgttca
     1441 cttcgtgcgc caccccgccc gccagtcggc cggccgcctg catccgctcg gcccggcgca
     1501 ggtgttcctc gacccgtttc cgctccgtga catcccg
//
LOCUS       DATIFF010000728         1665 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1169783, whole genome shotgun sequence.
ACCESSION   DATIFF010000728 DATIFF010000000
VERSION     DATIFF010000728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1169783"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(36..>1665)
                     /locus_tag="VLD58_10740"
     CDS             complement(36..>1665)
                     /locus_tag="VLD58_10740"
                     /inference="COORDINATES: protein motif:HMM:NF028240.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="putative porin"
                     /protein_id="HSB54827.1"
                     /translation="AQDRPDVSSMWQPNGAKPAKPAAAKPAAPKPAAEPVKTEPVKAA
                     PAASEPSPADKKVLEQLDAITRIMRDQATLIGDLQERLAAREKADAAAVAKPAAPASK
                     PAEAQPAPATKPAEPPAAPAAVKPAENPAPPAAKPAPVRTVESLGREIDSLRKEIVAA
                     DKRELQRVSGLGNFRFSGDVRIRYEPTFQGGGFVTRHRERSRARLNITGSTGSELSGG
                     ISFTTGDALEIQTENQTLSGFFTRKTIAFERFFVTYKPKWFTGFSLTAGKFPGTWART
                     GLTFSPDLYPEGISGQWQPAFTPPAGVELTVVGFWLPFLEVSGGRDSYITGGQIQTKW
                     SLDKNTKLLAHGAILDLTGADAIATAVAGGTLKQAQPQSNTLRVDGNNKVTGYAAKFH
                     NLDAIVGIEHAFSPSWPFSAQFNFTHNTRAAAGEQDGWWAEAKFGATNAPKQTQFGFT
                     WFRIERDAVVSAFNASDLRLGSNSEGQIVSITHKVRPDLTAGFTGWFGRVLDPTRTPS
                     LVAPQFQTACKTAPFEGCRDPRMSRLQFDIIYSF"
BASE COUNT          222 a          557 c          594 g          292 t
ORIGIN      
        1 ggcggagccg ccccctctcg gggggcggcc cagggttaga agctgtaaat gatgtcgaac
       61 tggagccggg acatccgcgg gtcgcggcat ccctcgaacg gcgccgtctt gcacgcggtc
      121 tggaactgcg gtgccaccag cgatggagtc ctggtcggat cgagcacccg gccgaaccac
      181 ccggtgaagc cggcggtcag gtcgggacgg accttgtgag tgatcgagac gatctgtcct
      241 tccgaattgc tgcccagccg gaggtcggag gcgttgaagg cggagacgac ggcgtcccgc
      301 tcgatccgga accaggtgaa gccgaactgg gtctgcttcg gcgcgttggt cgccccgaac
      361 tttgcctcgg cccaccaccc gtcctgctca cctgctgccg cccgggtgtt gtgggtgaag
      421 ttgaattgcg ccgagaaggg ccagctcggc gagaaggcgt gctcgatgcc gacgatggcg
      481 tcgaggttgt ggaacttcgc agcgtatccg gtgaccttgt tgtttccgtc cacccgcagc
      541 gtgttcgact gcggctgcgc ctgcttgagc gtgccccccg ccactgcggt ggcgatcgca
      601 tcggcgccgg tcaggtcgag aatcgccccg tgggccagga gcttcgtgtt cttgtccagg
      661 ctccatttgg tctggatctg gcctcccgtg atgtagctgt cccgcccgcc cgagacctcg
      721 aggaacggaa gccagaagcc caccaccgtg agctcgacac ccgccggcgg cgtgaatgcg
      781 ggctgccact gaccgctgat gccctcggga tagaggtccg ggctgaaggt caggccggtc
      841 cgggcccagg tgccggggaa cttccccgcg gtcaggctga atccggtgaa ccatttcggc
      901 ttgtaggtga cgaagaaccg ctcgaacgcg atcgtcttcc gggtgaagaa cccgctcagc
      961 gtctggttct ccgtctggat ctcgagcgcg tcgccggtcg tgaaggaaat gccacccgag
     1021 agctcgctcc cggtgctccc ggtgatgttg agccgggccc gcgagcgctc ccggtgacgc
     1081 gtcacgaagc cgcccccctg gaaggtgggc tcatagcgga tccggacatc cccagaaaaa
     1141 cgaaagttgc cgagcccgct cacccgctgc agctcgcgct tgtccgcggc gacgatctct
     1201 ttccggaggg aatcgatctc gcggccgagt gactcgacgg tgcggaccgg cgcgggcttc
     1261 gcggctggcg gcgccgggtt ttcggcgggc ttcacggccg ccggagccgc gggcggctcg
     1321 gccggcttgg tcgcgggcgc cggctgggct tccgccggtt tggacgcggg cgccgcgggc
     1381 ttggccaccg cggccgcatc cgccttctcc cgcgcagcca ggcgctcctg caggtcgccg
     1441 atcagagtgg cctggtcgcg catgatgcgc gtgatcgcgt cgagctgctc gaggaccttc
     1501 ttgtcggcag ggctcggctc tgaggctgcc ggcgcggcct tcaccggctc cgtcttcacc
     1561 ggctcggcgg cgggcttcgg cgccgccggc ttggccgccg cgggcttcgc gggcttggcg
     1621 ccattgggct gccacatcga gctcacgtcg gggcggtcct gggcc
//
LOCUS       DATIFF010000729         2403 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_247030, whole genome shotgun sequence.
ACCESSION   DATIFF010000729 DATIFF010000000
VERSION     DATIFF010000729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2403
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_247030"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..631
                     /gene="pstS"
                     /locus_tag="VLD58_10745"
     CDS             <1..631
                     /gene="pstS"
                     /locus_tag="VLD58_10745"
                     /inference="COORDINATES: protein motif:HMM:TIGR00975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HSB54828.1"
                     /translation="IARLNPGVKLPTGDIIVVHRSDGSGTSYIFTDYLSKVSPEWQQK
                     VGTGTSVNWPVGLGGKGNEGVTQQVKQTEGAIGYVELIYALSNGLSYATVKNAAGTDV
                     DASLASVTAAAGSAKFAKNTDFRVSITNAPGKDAYPISSFTWLLVRPDLADAGKAKAV
                     KDFLAWMISPEAQQLASELKYAPLPAPVVKLIGDRLPELRSNGKAIAAQ"
     gene            753..1817
                     /gene="pstS"
                     /locus_tag="VLD58_10750"
     CDS             753..1817
                     /gene="pstS"
                     /locus_tag="VLD58_10750"
                     /inference="COORDINATES: protein motif:HMM:TIGR00975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HSB54829.1"
                     /translation="MRGHFPRWCVTLGALALACSPRDKAGRAADGAPSAAATGAILTG
                     AGATFPNPIYSKWFDAYARETGVRINYQSIGSGGGIRQYTEGTVDFGASDGPMTDEQI
                     AAVHGDVLHVPTVLGAVVATYNLPALGGKPLRFDGPTLADIFLGRITKWNDTRLASLN
                     PGVALPAEDILVVHRSDGSGTTFIFTDFLSKVSPEWQSRVGHATSVEWPVGLGGKGNE
                     GVTQQVKQSEGAIGYVELIYALSNGLPAAEIRNPAGQFVAASLRTVTAAAAGVSFGPD
                     ADFRVSITNAPGAESYPIASFTWLLIHPGEPDAPKHKALRAFLAWMLEPTAQRMAADL
                     HYAPLPVGVIEAIQRRLGSS"
     gene            1874..>2403
                     /locus_tag="VLD58_10755"
     CDS             1874..>2403
                     /locus_tag="VLD58_10755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54830.1"
                     /translation="MTALSERDLQAPSPTPSDSSLERTSHADLIFKGLLTIGAATIPV
                     LLGFLVYELWSGSQLAMTKFGLDFVTTSVWDPVAEQFGAFPLIFGTLVSSLVALVIAV
                     PLSLGVAIYLTEFAPKVLRQPVAFLIGLLAAIPSVVYGLWGIFVLIPLLRKTAFPFLR
                     EALGFLPLFQGPIYGPS"
BASE COUNT          347 a          887 c          779 g          390 t
ORIGIN      
        1 gatcgcccgg ctcaatcccg gcgtgaagct gccgaccggc gacatcatcg tagtgcaccg
       61 ctcggacggg tcgggcacga gctacatctt caccgactac ctgtccaagg tgtcgcccga
      121 gtggcagcag aaggtcggca cgggcacctc ggtcaactgg cccgtcgggc tcggcggcaa
      181 gggcaacgag ggcgtgaccc agcaggtgaa gcagacggag ggcgcgatcg gctacgtcga
      241 gctgatctac gcgctgtcca acggcctgtc ctacgccacc gtgaagaatg ccgccggcac
      301 cgacgtggat gcctcgctcg cgtcggtgac cgccgcggcg ggcagcgcga agttcgcgaa
      361 gaacaccgat ttccgggtgt ccatcaccaa cgcccccggc aaggacgcct acccgatctc
      421 ctcgttcacg tggctgctgg tccggccgga cctggccgac gccggcaagg ccaaggccgt
      481 gaaggacttc ctggcctgga tgatctcgcc cgaggcgcag cagctcgcgt cggagctcaa
      541 gtacgcgccg ctgccggctc cggtcgtgaa gctcatcggc gaccggctgc ccgagctgcg
      601 gtcgaacggc aaggcgatcg cggcgcagta accccacgcg cgcacacggc agccggcatc
      661 gaggcagatg ccggctgccg tgtttcgttc ccggattcgc tgctaccttg gagacggccg
      721 ggagcttcca ccgccttcca ccggagggat tcatgcgcgg tcatttcccc cgctggtgcg
      781 tcaccctcgg cgcgcttgcg ctcgcctgct cgccccggga caaggccggc cgggcggccg
      841 atggcgcccc gagcgccgcc gctaccggcg caatcctgac cggcgccggc gccaccttcc
      901 ccaatccgat ctactccaag tggttcgacg cgtacgccag ggagaccggg gtgcgcatca
      961 actaccagtc catcggctcc gggggcggca tccggcagta caccgagggc accgtggact
     1021 tcggcgcctc ggacggcccg atgaccgacg agcagatcgc cgccgtccac ggggacgtcc
     1081 tccacgtccc cacggtgctg ggcgcggtcg tcgccacgta caacctgccg gccctgggcg
     1141 gcaagccgct ccggttcgac gggccgaccc tcgccgacat ctttctcggc cgcatcacca
     1201 agtggaacga caccaggctc gcgtcgctca accccggcgt cgccctcccc gcggaggaca
     1261 tcctcgtggt ccaccgctcg gacgggtcgg ggaccacgtt catcttcacc gatttcctgt
     1321 cgaaggtctc gcccgagtgg cagagccggg tcgggcacgc cacctcggtc gagtggccgg
     1381 tcgggctggg cggcaagggc aacgaggggg tgacccagca ggtcaagcaa tccgagggag
     1441 cgatcggcta cgtcgagctg atctacgcgc tctccaacgg gctcccggcc gccgaaatcc
     1501 ggaacccggc cgggcagttc gtggcggcct cgctgcgcac cgtcacggcc gcggccgcgg
     1561 gggtctcctt cggccccgac gcggacttcc gggtgtccat caccaatgct ccgggcgccg
     1621 aatcctatcc gatcgcctcg ttcacctggc tgctcatcca ccccggcgag cccgacgcgc
     1681 cgaagcacaa ggccctccgc gccttcctgg cgtggatgct ggagcccacc gcgcagcgca
     1741 tggcggccga cctgcactac gcgccgcttc cggtcggcgt catcgaggcg atccagcgcc
     1801 ggctggggtc ttcgtgaccc atccgttaca ctgatgtgac gatccacccg ggagcggggg
     1861 ctacactcct gccatgaccg ccctgagcga gcgcgacctc caggcgccga gccccacgcc
     1921 atccgattct tcgctcgagc gcaccagtca cgcggacttg atcttcaagg ggctgctcac
     1981 gatcggcgcc gcgacgattc cggtgctgct cggcttcctc gtctacgagc tgtggagcgg
     2041 gtcgcagctc gccatgacga agttcggcct cgatttcgtc accacgagcg tctgggatcc
     2101 ggtcgccgag cagttcgggg ctttcccgct gatcttcggc acgctggtgt cctcgctcgt
     2161 ggcgctcgtc atcgcggtgc cgctgtcgct gggcgtcgcc atctacctca ccgagttcgc
     2221 ccccaaggtg ctgcgccagc cggtcgcgtt cctcatcggc ctcctggccg ccatccccag
     2281 cgtggtctac ggcctgtggg ggatcttcgt cctgatcccg ctgctgcgga agacggcgtt
     2341 tccgttcctg cgcgaggcgc tcggttttct gccgctgttc cagggcccga tctacggacc
     2401 ctc
//
LOCUS       DATIFF010000730         6332 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1015814, whole genome shotgun sequence.
ACCESSION   DATIFF010000730 DATIFF010000000
VERSION     DATIFF010000730.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6332
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1015814"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1861
                     /locus_tag="VLD58_10760"
     CDS             <1..1861
                     /locus_tag="VLD58_10760"
                     /inference="COORDINATES: protein motif:HMM:NF015644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="UPF0182 family protein"
                     /protein_id="HSB54831.1"
                     /translation="VLVGRGLVPLVMQKFVVAPTELTRETPYLRNHIGATRQAWGLDS
                     VDTRDLDGESSLTLSDIRANAPTIDNVRLWDREPLLQTFGQLQEIRTYYDFVSVDDDR
                     YWIDGKYRQVLLSPRELNAASLPTRTFINEHLTFTHGMGLTLGPVNQVTTEGLPVLFI
                     KDLPPVSSVSLKVTRPQIYYGELANEYVFVRTKQREFDHPSGEDNVYSEYQGTGGVPV
                     RNLVRRLLLALRFGSSKILFSQDITSDSRVLYYRDIAVRAAMALPFLRFDRDPYLVVT
                     ADGALRWLLDGYTTSDGYPYAQPLEDGTSYMRNSVKLVIDAYDGSLTAYVSAPDDPLI
                     RTWARIFPGIFFPLDSMPADLRAHLRYPDELYRIQATLYTTYHMDAPEDFYHREDQWQ
                     IPSVTEAAQTVPFMRHIVMRLPEEAKAEFIYMVPFTPRGKDNLAAWMVARNDGEVYGK
                     LRVYRLSRQSLAYGPEQIENRINQDTEISRQVSLWDQRGSEVIRGDLLVIPIKSSLLY
                     VQPLYLRAEGGRIPELKRVVVAYQNRVVMQETLDGALTELFGGAGQDRQPGPSVAAEA
                     GAPAEFQALAAQARQRYQAALQAQRDLDWARYGEEMRRLGELLDRMGAGASVP"
     gene            complement(1863..>6332)
                     /locus_tag="VLD58_10765"
     CDS             complement(1863..>6332)
                     /locus_tag="VLD58_10765"
                     /inference="COORDINATES: protein motif:HMM:NF028476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucoamylase family protein"
                     /protein_id="HSB54832.1"
                     /translation="VSESAYNVRDRHGTYQYRSFGVPDLALKRGLGQDLVVAPYATLL
                     AAQVDPRAAIENLERLEQLGALGPYGFRDALDYTRPAPDQHFAVVHAYMAHHIGMGLV
                     ALTNVLGGHLWQRRFHADPVVRSAELLLHERIPSRLVLHEPQDDRTDRALPEGEQEQP
                     AVRLIDTADTPQPHIALLGHLPYTIMVTHCGGGYSRYGLLDVTRWRADGCRDSTGQFC
                     YLKDIGTGRVWSAAHQPVCAPADWQHAHLATDRISFHRADGDIETRTEIAVVPEDAAE
                     VRRVTVTNNGNETRTLELTSYGELVLAPPEGDRAHPAFGNLFVETEWHAWCHAITATR
                     RPRSSTEKPIWCVHVTAADGDLDGEVSCETDRARFLGRGRSTRDPVALEQDGPLSMTT
                     GAVLDPVIALRARVTLPPGQTASVAFTTLIATSRERAFELADRYRDPHAAQRALDLAW
                     TANQAELRELGLTPTLAGVFQELAGLLFHGTAALRAPQAELRRSTGSQPLLWANGISG
                     DWPIVLATIDSADGLPTLRELLAAHRYWRLRGMTVDLVILNTLPPDYLQDLADRITGA
                     VFALGDSGAVDRAGGVFLRRKDLLPPEQLRMLRATARVHIPCDGRALGRIMTTALQSE
                     ELGLEPPADEGEPPLPSEERPPDRANAGVVRVVRRLGAKLLAPLAALASELVEEAPQG
                     RARVPAVLPDNGFGELTPDGDYQIRVAGDRVPPAPWANVIANPHGGFVVTERGGGFTW
                     AASSYFYRLTPWHNDPVADPVSEVVYLEDHETEELWSATPGPVRTEQEFTVCHGAGSS
                     TFTSVHTGIATELTLGMADDAAVKIALLRVTNAGKRRRRLRLTTFVEWNLGALREHTQ
                     HQVGTTWDPVEQIFLARNTFDPQFAGWNAFHAISEPVIRHTGSRREFLGRNGTSASPA
                     ALKPGNFLQGTTGAGIDPCAALQAELELAPGETREVTILLGAAGSEAAARVAAETYRD
                     VGRARAALMRSVAAWQQRLTVIRVRTPEPSFDAMLNRWTLYQALACRMWARSALYQSS
                     GAYGFRDQLQDVMAFVYAEPALARSHLLRAAARQFIEGDVQHWWHPESGRGVRTRFSD
                     DLAWLPYVVDHYVGVTGDRAVLDEPAPFLRMRTLELGEHEIYDLPEVTNEQATLYEHC
                     LRALRRACTTGAHGLPLIGSGDWNDGMSRVGVEGRGESVWLAWFLATTLRNFAPHAES
                     RSDGATAAEFRRLAAAYVAAAEAHGWDGEWYRRAYYDDGTPLGSSGNAECRIDSIAQS
                     WSVISGAGAPERQARAMASLEQHLVDEPHRLLLLLTPPFDKAPQDPGYIKGYLPGVRE
                     NGAQYTHAALWAVLATALRGDGERAFELFQMLNPLTHARTPAEVATYKVEPYVVAADV
                     YTAAGQVGRGGWTWYTGSASWMYRVGLEGILGFARQGNQLRLTPRAPAAWREFAIEYR
                     HGQSRYSITLRNETGEAWGATVVTVDGVVSPTGAIPLLDDGRPHEVEVRAAAE"
BASE COUNT          926 a         2243 c         2192 g          971 t
ORIGIN      
        1 ggtgctggtc ggccgcggcc tggtcccgct ggtgatgcag aagttcgtgg tggccccaac
       61 cgagctgacc cgggagacgc cttaccttcg gaaccacatc ggcgcgaccc gccaggcgtg
      121 gggactggac agcgtggaca cccgcgacct ggacggcgag agcagcctca ccttgtcgga
      181 catccgggcc aacgccccca cgatcgacaa cgtgcggctg tgggaccggg agccgctgct
      241 ccagacgttc gggcagctgc aggagatccg cacctactac gatttcgtct cggtggatga
      301 cgaccgctac tggatcgacg ggaagtaccg ccaggtcctg ctctctcccc gggagctcaa
      361 cgccgcgtcg ctgcccaccc ggaccttcat caacgagcac ctgaccttca cgcacggcat
      421 gggactgaca ctcggccccg tgaaccaggt gactaccgaa ggcctcccgg tcctcttcat
      481 caaggatctc ccgcccgttt ccagcgtgtc actgaaggtc acccgcccgc agatctacta
      541 tggcgagctc gccaacgagt acgtcttcgt gcgtacgaag cagcgcgagt tcgaccaccc
      601 ctcgggcgag gacaacgtct actccgaata ccagggcacc ggtggcgtcc cggtacggaa
      661 cctggtgcgc cggctcctgc tcgccctccg attcggctcc agcaagatcc tcttctccca
      721 ggacattacc agcgacagcc gggtgctcta ctaccgcgac atcgcggtcc gggccgcgat
      781 ggcgctgccg ttcctccgct tcgaccggga cccctatctg gtggtcaccg ccgacggcgc
      841 gctccgctgg ctgctcgacg gctacaccac gtcggacggg tatccctacg ctcagccgct
      901 cgaggacggc accagctaca tgcgcaacag cgtgaagctg gtcatcgatg cctatgacgg
      961 ttcgctgacc gcctacgtca gcgcgcctga cgatcccctg atccggacct gggcgcgaat
     1021 cttccccggc atcttctttc ccctggacag catgccggcc gacctgcgag cccacctccg
     1081 gtatcccgac gagctctacc ggatccaggc gaccctctac accacctacc acatggacgc
     1141 gccggaggac ttctaccacc gggaagacca gtggcagatc ccgtcagtga ccgaggccgc
     1201 ccagacggtc cccttcatgc gccacatcgt catgcggctg ccggaagagg caaaggccga
     1261 gttcatctac atggtgccct tcacgccgcg cggcaaggac aacctggcgg cgtggatggt
     1321 ggcccggaac gatggcgagg tctacgggaa gctccgggtg taccggctct cccggcagag
     1381 cctggcgtac ggtccggagc agatcgagaa ccggatcaac caggataccg agatctcccg
     1441 ccaggtttcc ctgtgggacc agcgcggctc cgaggtgatc cggggcgacc tgctggtgat
     1501 cccgatcaag tcctcgctgc tctacgtcca gccactctac ctgcgtgcgg agggagggcg
     1561 gatccccgag ctcaagcggg tggtggtcgc ctatcagaat cgggtggtga tgcaggaaac
     1621 gctggatggt gccctgaccg aactgttcgg cggcgccggg caggaccgtc agcccgggcc
     1681 ctcggttgcc gccgaggcgg gagcgcccgc ggagttccag gcgctggccg cccaggcccg
     1741 gcagcggtac caggctgcac tgcaggcgca gcgggatctc gactgggccc gctacgggga
     1801 ggaaatgcgg cggttgggtg agctgctcga tcggatgggg gccggggcct cggtgccata
     1861 gctcactccg cggccgcccg cacctccacc tcatggggcc ttccgtcatc caggagcgga
     1921 atggctcccg tcggggacac gaccccgtcg accgtcacca cggtcgcgcc ccacgcctct
     1981 ccggtctcgt tccgtagcgt gatgctgtag cggctctggc cgtggcggta ctcgatcgcg
     2041 aactcccgcc acgccgccgg cgcccgtggc gtgagccgga gttggttgcc ctgcctggcg
     2101 aagccgagga ttccctcgag ccccacccgg tacatccagc tcgccgagcc ggtgtaccag
     2161 gtccagccgc cccggccgac ctgcccggcg gcggtgtaga catccgccgc cacgacgtac
     2221 ggctccacct tgtaggtcgc gacctcggcc ggggtgcgcg catgggtgag cgggttgagc
     2281 atctggaaca gctcgaaggc gcgctcgccg tcgccccgga gcgccgtggc aagtacggcc
     2341 cagagcgcgg cgtgggtgta ttgcgcgccg ttctcgcgca ctccggggag gtagcccttg
     2401 atgtagccag ggtcctgcgg cgccttgtcg aatggcggcg tgagcaggag cagcagccgg
     2461 tgcggttcgt cgaccaggtg ctgctcgagc gaggccatcg cccgggcctg ccgctccggt
     2521 gcccccgcgc ccgagatcac actccagctc tgcgcgatcg agtcgatgcg gcactccgca
     2581 ttccctgacg atccgagcgg cgtgccgtca tcgtagtagg cccggcgata ccactcgcca
     2641 tcccagccgt gtgcctcggc ggccgcgacg taggccgccg ccagccgtcg gaactccgcg
     2701 gccgttgcgc cgtcgctgcg cgactcggcg tgcggggcga agttccggag ggtggtggcg
     2761 aggaaccacg cgagccacac actctcgccc cgcccctcga cgccgacccg gctcatgcca
     2821 tcgttccagt cgccgcttcc gatgagcggc aggccatgcg cccccgtggt gcacgcccga
     2881 cggagcgcgc gcaggcagtg ctcgtacagg gtggcctgct cgttggtgac ctcgggcagg
     2941 tcgtagatct cgtgttcgcc gagttcgaga gtacgcatcc ggaggaaggg cgccggctcg
     3001 tcgagcaccg cccggtcgcc ggtgaccccc acgtagtgat ccaccacata cggcagccag
     3061 gcgaggtcgt cggagaaacg agtacggacc ccgcgcccgc tctccggatg ccaccagtgc
     3121 tgcacgtctc cctcgatgaa ctgccgcgcc gccgcccgga gcaggtgcga gcgcgccagc
     3181 gcaggctcgg cgtagacgaa cgccatcacg tcctgtaact ggtcgcggaa gccgtaggcc
     3241 ccgctgctct ggtagagcgc cgaacgggcc cacatccggc aggccagcgc ctggtagagg
     3301 gtccagcggt tgagcatggc gtcgaagctc ggctccggcg tccgaacccg gatcaccgtg
     3361 agtcgctgct gccatgcggc gacgctccgc atgagcgccg cccgcgcccg gccgacgtcg
     3421 cggtaggtct cggccgccac ccgcgccgcg gcttcgctgc cggcggcgcc aaggaggatc
     3481 gtgacttcgc gggtttcgcc gggagcgagc tccagctcgg cttgcagggc ggcgcaggga
     3541 tcgatgccgg cgccggtcgt gccctggagg aagttgccgg gcttgagcgc agccgggctc
     3601 gcgctggtgc cgttccgccc caggaactcg cgccggctcc cggtatggcg gatgaccggc
     3661 tccgagatcg cgtggaaggc gttccacccg gcgaactgcg gatcgaaggt gttgcgggcg
     3721 aggaagatct gttccaccgg atcccaggtc gtgcccacct ggtgctgggt gtgctcccgg
     3781 agggcgccca ggttccactc gacgaaggtc gtgagcctga gccgccgccg gcgcttgccc
     3841 gcgttggtta cccggagcag ggcgatcttc accgccgcgt catcggccat gccgagggtc
     3901 agctcggtcg cgatcccggt gtgcacactg gtgaaggtgg agctccccgc gccatgacac
     3961 acggtgaact cctgctcggt ccgcaccggc cccggcgttg ccgaccagag ctcttccgtc
     4021 tcgtggtcct ccaggtagac gacctcgctc accgggtcgg cgaccggatc gttgtgccac
     4081 ggggtgagcc ggtagaagta gctgcttgcg gcccaggtga acccgccgcc ccgctcggtc
     4141 accacgaacc cgccgtgcgg gttggcgatc acgttggccc acggcgccgg cggcacccga
     4201 tcccccgcca cccggatctg gtagtcgccg tccggcgtga gctcaccgaa gccgttgtca
     4261 ggcagcacgg ccggcacgcg ggcgcgcccc tggggggcct cctccaccag ctcggacgcg
     4321 agcgcggcga gcggcgcgag cagcttggcc ccgagccgcc gcaccacccg taccaccccg
     4381 gcattggccc ggtcgggcgg acgctcctcg ctcggcagcg gtggctcgcc ctcgtcggcc
     4441 ggcggctcga ggcccagctc ctcgctttgg agtgccgtcg tcatgatccg gccgagcgcc
     4501 cggccgtcgc agggaatgtg tacccgcgcc gtcgcccgga gcatgcggag ctgctccggc
     4561 gggagcagat cctttcgccg gaggaagact ccgccggcgc ggtccaccgc gcccgaatcg
     4621 cccagcgcga agaccgcgcc ggtgatccgg tccgccaggt cctggagata gtcaggcggg
     4681 agggtgttga ggatgacgag gtccaccgtc atcccgcgca ggcgccagta gcggtgggcg
     4741 gcgagcagct cacggagggt cggcaggcca tcggccgagt cgatcgtcgc cagcacgatc
     4801 ggccagtcgc ccgaaatgcc gttggcccag aggagcggct gtgacccggt cgagcgccgc
     4861 agttctgcct ggggcgcccg taacgccgcg gtcccgtgga agagcagtcc cgccagctcc
     4921 tggaatacgc ctgccagggt aggcgtgagg ccgagttccc ggagttccgc ctggttcgcg
     4981 gtccaggcga ggtcgagggc acgctgcgcc gcatgcgggt cgcgatagcg gtccgccagc
     5041 tcgaatgccc gctcccggct cgtcgcgatg agcgtggtga atgccaccga cgcggtctgg
     5101 cccggcggca gcgtcacgcg cgcgcggagc gcgatgaccg ggtcgagcac tgcgcccgtg
     5161 gtcatcgaga gggggccatc ctgctccagc gccaccggat cccgggtcga gcgcccccgg
     5221 ccgaggaacc gggcccggtc ggtctcgcag ctgacctcgc cgtccagatc cccatcggcc
     5281 gcggtgacgt gcacacacca gatgggcttc tccgtcgagg agcggggccg gcgggtggcg
     5341 gtgatggcgt gacaccaggc atgccactcg gtctccacga agaggttgcc gaaggcggga
     5401 tgggcccggt ccccctcagg cggcgcgagc accagctcgc cgtagctggt gagctcgagc
     5461 gtcctggtct cattgccgtt gttggtcacc gtcacccgcc gcacctcggc tgcgtcctcc
     5521 ggcaccaccg cgatttcggt ccgggtctcg atgtccccgt cggcgcggtg gaagctgatc
     5581 cggtcggtgg cgaggtgggc gtgctgccag tcggcggggg cgcagaccgg ctggtgcgcc
     5641 gccgaccaga cccggccggt cccgatgtcc ttgaggtagc agaactgccc ggtcgagtcc
     5701 cggcacccat cggcccgcca gcgggtaacg tcgagcaagc cgtagcgact gtagccgccg
     5761 ccgcagtggg tcaccatgat cgtgtaaggc aggtggccca gcagcgcgat gtgcggctgg
     5821 ggggtgtccg cagtgtcgat caggcgtacc gccggctgtt cctgctcccc ttcaggcagc
     5881 gcccggtcgg tccgatcgtc ctgcggctcg tgcagcacca gccggctggg aatccgctcg
     5941 tgcagcagga gctccgccga gcgtactacc ggatcggcgt ggaagcgccg ctgccagagg
     6001 tggccaccga gcacattggt gagcgccacc agtcccatgc cgatgtggtg cgccatatag
     6061 gcgtggacga cggcaaagtg ctggtccggg gcggggcggg tgtagtccag cgcgtcacgg
     6121 aagccatagg ggccgagcgc gccaagttgt tccagcctct cgaggttctc gatcgccgcg
     6181 cgcggatcga cctgcgcggc gagcagggtg gcgtagggtg ccaccaccag gtcctggccg
     6241 agcccccgtt tgagggcgag gtcgggcacg ccgaacgagc ggtactggta ggtgccatgc
     6301 cggtcgcgca cgttgtaggc gctctcgctc ac
//
LOCUS       DATIFF010000731         1493 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_553549, whole genome shotgun sequence.
ACCESSION   DATIFF010000731 DATIFF010000000
VERSION     DATIFF010000731.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1493)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1493)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1493
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_553549"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1493)
                     /gene="secD"
                     /locus_tag="VLD58_10770"
     CDS             complement(<1..>1493)
                     /gene="secD"
                     /locus_tag="VLD58_10770"
                     /inference="COORDINATES: protein motif:HMM:TIGR01129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HSB54833.1"
                     /translation="PMLRNLRTRLIVIGLLVASSAFTLWQNYRHTSTDGRNGQPVSLG
                     LDLQGGMHLALELDESQRRSDNRARDIELALTVLRKRIDEFGVAERLIQQVGDHRIVV
                     ELPGLRDPERAREIVRRNAFLEFRLTDRSEAFQRALPSIDRVVGPVPGVAAPAPNGLD
                     QLLRADSTSTVTRGALSSLLLPSGPGGVPGEFLVAESRWRQVDSLLRQEEVRRLWPRG
                     LDLKWSSVPAGLAPEQFRALYVLEDRPIVTGANLQDAQAQIDPLTYGAEVVFRLDNAG
                     GGRFGKATERNIGNHLAILLDGQVQGPPPVIQGRIDRSGRIEMSGKSLTEAQDLALTL
                     RAGALPIPLKIVEERQVGPSLGADSIRGGITAGMVGMALVVLIMTGYYALSGLLAVGA
                     LTLYSLFTFGGLAFVGATLTLPGLAGFVLSIGFAVDANVLIFERIREELAAGRKVKSA
                     VEEGFRHAMPAIIDSNITTVLTALFLFQFGTGPVKGFAVTLVIGILA"
BASE COUNT          244 a          499 c          532 g          218 t
ORIGIN      
        1 aggcgaggat gccgatgacc agcgtgaccg caaagccttt caccggaccg gtgccgaact
       61 ggaagaggaa gagggcggtg agcaccgtgg tgatgttgga gtcgatgatg gccggcatgg
      121 cgtggcggaa gccctcttcc accgcgctct tgaccttcct gcccgcggcg agttcctccc
      181 ggatccgctc gaagatcagg acgttggcgt cgaccgcgaa gccgatcgac aggacgaagc
      241 cggcgaggcc cggcagggtc agcgtcgccc cgacgaaggc caggccgccg aaggtaaaga
      301 gcgagtagag cgtcaaggcg cccaccgcga ggaggccgct cagggcgtag tacccggtca
      361 tgatcagcac caccagcgcc attcccacca tcccggccgt gatcccgccc cggatggagt
      421 ctgcgccgag gctgggcccc acctggcgtt cctccacgat cttgagcgga atcgggagcg
      481 cgccggcccg gagggtgagc gccaggtcct gcgcctcagt gaggctcttg ccgctcatct
      541 cgatacgtcc cgagcggtcg atgcggccct ggatgaccgg cggggggccc tggacctggc
      601 cgtcgagcag gatcgcgaga tggttgccga tgttccgctc ggtagccttg ccgaagcggc
      661 cgccgccggc gttatcgaga cggaacacca cctcggcacc gtaggtcagc gggtcgatct
      721 gggcttgggc gtcctgcagg ttggcgccgg tgacgatggg ccggtcctcg aggacataga
      781 gggcccggaa ctgctcgggc gcgaggcctg cggggacgga actccacttg aggtcgagac
      841 cgcggggcca gagccgccgc acctcttcct gccggagcag actgtccacc tgcctccagc
      901 gcgactccgc caccaggaac tcgcccggaa cgccgcccgg gccgctgggg agcaggagac
      961 tggagagcgc accccgcgtc accgtcgacg tggagtcggc gcggagaagc tggtccagtc
     1021 cgttcggtgc cggggcggcg actccgggca ccgggcccac gacccggtcg attgacggca
     1081 gcgcacgctg gaaggcctcg cttctgtcgg tgagccggaa ctcgaggaag gcgttgcgcc
     1141 gcacgatctc ccgggcccgc tccgggtcgc ggagcccggg cagctccacc acgatccggt
     1201 gatcacccac ctgctggatg agccgttccg ccactccgaa ctcgtcgatc cgcttccgca
     1261 gcaccgtcag ggccagctcg atatcgcggg ctcgattgtc cgagcggcgc tgcgattcat
     1321 ccagctccag cgcgagatgc atccctccct gaaggtccag gccgagactg accggctggc
     1381 cgttgcggcc gtcggtagag gtgtggcgat agttctgcca gagggtgaag gccgagctgg
     1441 cgaccaggag cccgatgacg atgagccggg tccggagatt cctgagcatg ggg
//
LOCUS       DATIFF010000732         1564 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2092490, whole genome shotgun sequence.
ACCESSION   DATIFF010000732 DATIFF010000000
VERSION     DATIFF010000732.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2092490"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..567
                     /locus_tag="VLD58_10775"
     CDS             <1..567
                     /locus_tag="VLD58_10775"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HSB54834.1"
                     /translation="SLYNAAATARSDPNGMTMPTDFSDDTSHTDLSVTAFGQGEVLAT
                     PLGMASVAQTVANDGVRSPTSIVKDPGLKSDAKPVPVTSKENAKVLTGLMRAVVTSGT
                     GVAANIPGIQVAGKTGTAELGPKPGQPPAPPGQENTVEQIVDGWFICFAPARKPKLAV
                     AVMLIDASGDGGTTAAPIARNIIEAGLK"
     gene            complement(580..897)
                     /locus_tag="VLD58_10780"
     CDS             complement(580..897)
                     /locus_tag="VLD58_10780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54835.1"
                     /translation="MAKTQLQALLVIGAIGAALALIQLLGIAGGLVGVGLMAFSTILT
                     APAAPEPGVRGLNWWALLAGGTALALVGVPLGLLLEAPGGLLTAIGGGMAIVGVAFGY
                     PSG"
     gene            complement(903..1451)
                     /locus_tag="VLD58_10785"
     CDS             complement(903..1451)
                     /locus_tag="VLD58_10785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54836.1"
                     /translation="MRPGHKGALAIAFMLALALVGVAGCGNSPGKEGDEGEPIQLGDL
                     EINVQLTRFLNPTDHEDKNYLVGQTIPTPAGKSYLGVFLTMKNHSDQATRVPSTAQMT
                     IVDTTGAGYEAIPSNTPFAAPLGTALAGHGVIPVPDSPADSGPTQGAIVLFLVDQGVS
                     ENRPLKLEIEHDGETGDITLDI"
BASE COUNT          248 a          564 c          528 g          224 t
ORIGIN      
        1 agcctctaca acgccgcggc aacggcgcgg tcggacccga acggcatgac tatgcccacc
       61 gacttcagcg acgacacgag ccatacggac ctctcggtca ccgccttcgg ccagggcgag
      121 gtgctcgcca ccccgctcgg catggcctcg gtcgcccaga cggtcgccaa cgacggggtg
      181 cgcagcccca cctcaatcgt caaggacccc gggctgaaga gcgacgcaaa gccggtcccg
      241 gtgacctcaa aggagaacgc caaggtgctg acgggcctga tgcgcgccgt ggtcacctcc
      301 ggcaccggcg tcgcggcgaa catcccgggc atccaggtag cgggcaagac gggcaccgcg
      361 gagctcggcc cgaagcccgg tcagccgccc gccccgcccg gacaggagaa cacggtcgag
      421 cagatcgtcg acggctggtt catctgcttc gcccctgccc ggaagcccaa gctcgcggtc
      481 gccgtgatgc tgatcgacgc ttccggtgac ggcggcacca ccgcggcgcc gatcgcccgg
      541 aacatcatcg aggcgggcct gaagtaagcc cggtcgggct cacccgctcg ggtagccgaa
      601 cgcgacaccg acgatcgcca tccccccgcc gatcgcggtg agcagcccgc cgggagcctc
      661 gagcagcaat ccgagcggca cgccgaccag cgccagcgcg gttccgcccg cgagcagcgc
      721 ccaccagttg agcccgcgca cccccggctc gggggcagcc ggcgccgtga ggatcgtcga
      781 gaaggccatc agccccacgc cgaccaggcc gcccgcgatc ccgaggagct ggatcagcgc
      841 gagggccgct ccgatggctc cgatgacgag cagcgcctgg agctgggtct tggccacccc
      901 gcctagatat cgagcgtgat gtcgccggtc tcgccgtcgt gctcgatctc gagcttgagc
      961 ggccggttct cgctgacgcc ctggtccacc aggaagagga cgatcgcgcc ctgggtcggc
     1021 ccgctgtccg ccggggaatc gggcaccggg atcacgccgt gtcccgcgag cgctgtgccc
     1081 agcggagccg cgaatggtgt gttgctcggg atcgcctcgt atccggcgcc ggtggtgtcg
     1141 acgatggtca tctgtgctgt ggagggcacg cgggtcgcct gatcgctgtg gttcttcatc
     1201 gtcaggaaga cccccaggta cgacttcccg gcgggagtcg ggatggtctg gcccaccaga
     1261 tagttcttgt cctcgtggtc ggttgggttc aggaatcgcg tcagctgaac gttgatctcg
     1321 aggtccccca gctggatcgg ctctccctca tccccctcct tgccgggcga gttgccgcag
     1381 ccggcaacgc ccaccagcgc gagggcgagc atgaacgcga tggccagggc tcccttgtgg
     1441 ccggggcgca tgagggcgcg cagtctatcc ggcgatgctc gggacacggt cgcccccggc
     1501 gatctcgacc cgaggtacgg aggctcccga ttcaatcagc tcacgcatgc gcgacagcgc
     1561 cttg
//
LOCUS       DATIFF010000733         1222 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_860304, whole genome shotgun sequence.
ACCESSION   DATIFF010000733 DATIFF010000000
VERSION     DATIFF010000733.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1222
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_860304"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            225..1158
                     /locus_tag="VLD58_10790"
     CDS             join(225..571,570..1158)
                     /locus_tag="VLD58_10790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558180.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HSB54837.1"
                     /translation="MFDRHDLTDEEWAGLEPLLPDRTPRRGGRWADHRALINGVLWRT
                     RTGSPWRDLPGCYGHWKTVYNRHRRWSTDRTWDQILAGLRRGCDQDANQEWTLGVDST
                     VTRAHQHAAGARRPRPNSPPGAASNDKKPSGEQADVPAREALGRSRGGLTCKLHLVAD
                     RRCRPIAQLLTAGHRHDSIAFEALLAAICIHRRGAGRPRTRPDRVLADKAYSNKAIRA
                     YLRRRGIRTTIPEPADRQAHRARRGQRAGRPPAFDPHRYRQRNVVERCINKLKEFRAV
                     ATRYDKREYVYRGTVNVASIRIWLKDPVPDPQDRP"
BASE COUNT          229 a          425 c          399 g          169 t
ORIGIN      
        1 ttggtataac accaagacga aacactatga aaacccatga cgacttctgg acagaacaca
       61 ctcggctatt tgacggccac tttcgctatt tcgaccggag cgggcagaag aagacctcgg
      121 tctggggaaa gtaccacgtg gcagaggagc actaccttga cgcggcccat gagttagggc
      181 gtgtcccatg gatcgccagg gtgggatccg gtagatcgtc ggtcgtgttt gatcgccatg
      241 atttgaccga tgaggaatgg gctgggctgg agccgttgct gccggatcgg accccgcgtc
      301 ggggcgggcg gtgggccgac catcgggcgc tgatcaacgg ggtgttatgg cggactcgga
      361 ccggctcacc ctggcgggac ctgcccggct gctacgggca ctggaagacc gtctacaacc
      421 gacaccggcg ctggtcgacg gaccggacct gggatcagat tctggccgga ttgcgccgag
      481 gctgcgatca agacgcgaac caggagtgga cgctcggggt ggactccacg gtgacccggg
      541 cacaccagca cgcggccgga gcgcggcggc cgcccgaaca gccccccggg ggcggcatcg
      601 aatgacaaga aaccgtccgg cgagcaggca gacgtgcctg ctcgggaagc attggggcgg
      661 tcccgaggcg gcctgacctg caagcttcac ctggtcgccg accgtcgctg ccggccgatc
      721 gcacagctgc tcaccgccgg ccaccggcac gactcgatcg ccttcgaagc gctgctggcc
      781 gccatctgca tccaccgccg cggcgccggc cgcccgcgca cccgaccaga tcgcgtattg
      841 gccgacaagg cctattcgaa caaggccatc cgcgcctacc tgcgccgccg cgggatccgc
      901 accaccatcc ccgaaccggc cgaccggcag gcgcaccgcg cccgacgcgg ccagcgggcc
      961 ggccggccac ccgccttcga cccacaccgc taccgacagc gcaacgtcgt cgagcgctgc
     1021 atcaacaagc tcaaggagtt ccgggccgtg gccacccgct acgacaaacg tgaatacgtc
     1081 taccgcggca ccgtcaacgt cgcctcaatc agaatctggc tcaaagaccc ggtgcctgat
     1141 ccacaggaca ggccctagcc cgccagcgcg cgggcggact tggccgtcgc ggcggccggc
     1201 cggctacaag ccttgcgatg gg
//
LOCUS       DATIFF010000734         1107 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2092767, whole genome shotgun sequence.
ACCESSION   DATIFF010000734 DATIFF010000000
VERSION     DATIFF010000734.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2092767"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            482..>1107
                     /locus_tag="VLD58_10795"
     CDS             482..>1107
                     /locus_tag="VLD58_10795"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB54838.1"
                     /translation="MFDSGEAAGLVFYVMPYVEGESLRSRLQRVRQLPVEDAVRIARE
                     VADALDYAHRHGVIHRDIKPENILLHDGRALVADFGIALAVSRSEGGTRLTETGMSLG
                     TPHYMSPEQAMGEREISAASDIYALGCITYEMLIGEPPFTGPTAQSIVARVMTEEPRP
                     LTLQRKTVPPHVEVAVLTALEKLPADRFGSAAEFAAALAGGAASGRVP"
BASE COUNT          163 a          383 c          377 g          184 t
ORIGIN      
        1 ggcctcgcct gacctcggcg cggagccctc ggcggcgcct tttctcgttg tgaatggcgg
       61 gccagtctcc cactatccgt gcgcgctcgg cgcgttcggc cgtgggtggc gccggcgcgc
      121 tgcggcggga ggcggcctcc ctcgctatcc ctgatcgcta ttcattcagt agccgcataa
      181 ggacaccgcg ccgctttctg gcacacttgt cgggcacgcc gtatcttggt gccgttcctc
      241 cctcattcct tctaccaata cggttgccat ttgacggacg cagcagagcg cctgtcgcct
      301 gccttggagg accgctatcg catcgagcgc aagctcggcg agggcgggat ggccacggtc
      361 tatctcgccg aggacctgcg ccatcatcgc aaggtggcgg tgaaggtctt gcgccccgag
      421 ttgagcgccc ctgcacgaga tcaccacgac ggccaacctg cagcatcctc acatcctttc
      481 gctgttcgat tcgggagagg ccgcggggct ggtcttctac gtgatgccct atgtcgaggg
      541 ggaatcgctg cggagccggc tgcagcgggt gcggcagctg ccggtggagg acgccgtgcg
      601 catcgcccgc gaggtggccg atgccctcga ctatgcccac cgccacgggg tgatccaccg
      661 ggacatcaag cccgagaata tcctgctgca cgacggccgg gcgctggtgg cggacttcgg
      721 gatcgcactg gcggtgagcc ggagcgaagg cgggacccgg ctcaccgaga ccggcatgag
      781 cctcggcacg ccgcactaca tgagccccga acaggcgatg ggcgagcggg aaatatcggc
      841 cgcgagcgac atctatgctc tcgggtgcat cacctacgag atgctgatcg gcgagccgcc
      901 gttcaccggc cccacggcgc agtccatcgt ggcgcgggtg atgaccgagg agccccgccc
      961 gctcaccctg cagcgcaaga cggtaccgcc ccacgtcgag gtcgcggtgc tcaccgcgct
     1021 cgagaagctg ccggccgacc gcttcggcag tgcagccgag ttcgcggccg ccctggccgg
     1081 tggtgcggcc tccggccggg tgccgag
//
LOCUS       DATIFF010000735         4258 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_554116, whole genome shotgun sequence.
ACCESSION   DATIFF010000735 DATIFF010000000
VERSION     DATIFF010000735.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4258
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_554116"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(76..606)
                     /locus_tag="VLD58_10800"
     CDS             complement(76..606)
                     /locus_tag="VLD58_10800"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HSB54839.1"
                     /translation="MPATRHDLLVQEITQTTDGFLKALDDVPEDRWNYTPSAEVWSVG
                     QTAEHTAGVFRGIQRLLQKKLLDNPFPEGVRSPIGDEVIVQSMFNREKRYNAPEFALP
                     TGKWTSREPLVTEFVESRRLMLAWIDGVTEDLRAYFAPHPMIGTMDGVQWLLFAAAHT
                     ERHTRQIIEFRRSAGF"
     gene            complement(621..2186)
                     /locus_tag="VLD58_10805"
     CDS             complement(621..2186)
                     /locus_tag="VLD58_10805"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSB54840.1"
                     /translation="MSARLLGVATLVFALTTSLAAQVPAGDSAWARGDYPTARARYEA
                     ALHDNPGSVRALYRLGILAAWDGKLDSALALLRDAREMEPDEPDVRLQQATVLSWKGK
                     YGASLLQWDSLIAAHPERRDAVHGRARTLSWAGRLTEADRAYANLYQSDSTDLDALAG
                     RGQVASWKGDFGRAADFYRQVLARNPDHVGALVGLAQVRQWQGRPAEAEQHVNRALAV
                     APRDRTALDAQRAIRALRRPRLDLTLGWSRDSDKNTLWWQNAATSLLLTGGVRGFASA
                     GIAEASDPTRTGTRLSGEAGLTLDRGRVSLTGALGARNLSSDAAADRSLATWRASSRL
                     RLASGAGIGAGYAHYSFDETALLLGRDLDVDELSLDADVEPRQGLSLGAGLGTAWLSD
                     DNQRRWAVLAVTQRVASHFTLGVFGRALGYEARGAGYFAPDRFLVGEARGSYTYGVRR
                     WVMRLSGGFGAQQIGQGASAQSEWHAEARGARRWSVDNEVALSGGISNSAESSTTGAF
                     RYYTAALTVRLGL"
     gene            complement(2183..>4258)
                     /locus_tag="VLD58_10810"
     CDS             complement(2183..>4258)
                     /locus_tag="VLD58_10810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54841.1"
                     /translation="GWRRLYVNGVNMGVALPGKFPSEFPLDSATYAGWLDTLAAMHTN
                     TLRLYTVLPASFYRAVAAWNRRHPTQPLWLIHGVWTELPPEHDFNDPAWREEFRQEMR
                     RVVDLLHGNAEIPVRPGHAGGRYDADVSRWVLGYIIGREWEPYAVKEFDAKNPSPGPF
                     NGRFLSTTAKASAADIWMAEQCDYLLGYEVDTWNTIRPIAYTNWPTLDPLTHITEATG
                     KEESAWRRKVGRPLPRDPIEYENDALGLDAMVIKATSANPAGWFASYHAYPYYPDFLL
                     YDPGYNQASSSEGRSNYFGYLRALKQHHAGIPLLLSEYGVPSSRGLAHLQPQGWHHGG
                     HDEIGMAAVDARLTREIREAGAAGGIVFAWIDEWFKKNWIVIDYEIPLENTRQWHNLM
                     DAEQNYGILGMYAGDGVSTPVLGGDIRRWQALESYQSGAMGRVRIGADESYLYLAVEL
                     AGQAGRPLPAGAERTFAIMLDTYRPDLGTFYGVPKGDVGFEFAVYLRDTIGEIRVTPD
                     YNPYSGADVIINGDDYGRFRHRPVVTRPRQDGRFDSLFVITNRSRFTRDGKFIQAQGV
                     NRGRLRYGTEAASSLSDWYYDRATGTIELRLAWGLINVSDPSTGTILYEESDTGDIGT
                     TRSDGIRVGVAMMERGKEVVAALPAADRGEWRRARFPTWRWPTWTTPRYHQRLKPVYD
                     SLKALWGKW"
BASE COUNT          645 a         1438 c         1459 g          716 t
ORIGIN      
        1 cccttctcac ttctcacttc tcacttctca cttcttactt cttacttctc ccttctccct
       61 tctcccttct ccctctcaga acccagcaga tcgccgaaac tcgatgatct gcctcgtatg
      121 ccgttccgtg tgcgcggccg cgaagagcag ccactgcacc ccatccatcg tcccgatcat
      181 cgggtgggga gcaaaatagg cccgcaggtc ctcggttacc ccgtcgatcc aggccagcat
      241 cagccgccgc gattccacga actcggtcac cagcggttcg cggctggtcc actttcccgt
      301 cggcagggcg aactccggcg cgttgtatcg cttctcccgg ttgaacatcg actggacgat
      361 cacttcgtcg ccgatcgggg agcggactcc ctcggggaag gggttgtcga gcagcttctt
      421 ctgcagcagc cgctggatgc cccggaacac acccgcggtg tgctccgcgg tctggcccac
      481 cgaccacacc tcggccgacg gcgtgtagtt ccatcggtcc tccggcacat cgtcgagcgc
      541 cttgaggaac ccatcagtgg tctgggtgat ttcctgcacc agcaggtcgt gacgcgttgc
      601 gggcatgcgt gagaatcctt ttacaggccg agccgcacgg tgagcgcggc ggtgtagtaa
      661 cggaacgcgc ccgtggtgct gctctcggcg ctgttggaga tcccgcccga gagcgcgacc
      721 tcgttgtcca ccgaccagcg ccgggcgccg cgggcttcgg catgccactc gctctgggcg
      781 ctggcgccct ggccgatctg ctgggccccg aagccaccgg acaggcgcat gacccagcgg
      841 cgtaccccat aggtgtacga cccgcgcgcc tcacccacca ggaaacgatc cggggcaaag
      901 taacccgcgc cccgggcctc gtatccgagc gccctcccga atactcccag cgtgaagtgg
      961 gacgcgaccc tttgtgtcac cgccagcacg gcccagcggc gctgattgtc atcgctcaac
     1021 cacgcggtgc ccaggccggc cccgagcgag agtccctgcc gaggctcgac gtcggcgtcg
     1081 agactcagct cgtcgacatc gaggtcgcgg cccagaagga gcgcggtctc gtcgaagctg
     1141 tagtgcgcgt agcccgcgcc gatgcccgcg ccggacgcca ggcggagcct cgatgacgcc
     1201 cgccaggtgg cgagactccg gtcggcggcg gcgtcactcg agagattgcg ggcgccgagc
     1261 gcccccgtca ggctcacgcg gccacggtcg agggtgagcc ccgcctcgcc ggagagccgg
     1321 gtgccggtac gggtcgggtc gctggcctcg gcaatacccg cgctggcgaa gccgcgcacg
     1381 ccgccggtga ggaggagcga ggtggccgcg ttctgccacc agagcgtgtt cttgtcggaa
     1441 tcgcggctcc agccgagtgt caggtcgagg cgggggcgac gaagggcgcg gatggcgcgc
     1501 tgggcgtcga gggctgtgcg gtccctgggc gcgaccgcca gcgcgcgatt cacatgttgc
     1561 tccgcctcgg cggggcgtcc ctgccactgg cgcacctggg ccagccccac gagggcgccg
     1621 acatgatcgg ggttccgcgc cagtacctgc cggtagaagt cggcggcgcg cccgaagtct
     1681 cccttccatg aggcgacctg gccccggccg gcgagggcat cgaggtcggt cgagtcgctc
     1741 tggtagagat tggcgtaggc gcggtccgcc tcggtgagcc gcccggccca ggagagggtg
     1801 cgggcccggc cgtgaacggc gtcgcgccgc tcggggtggg cggcgatgag cgagtcccac
     1861 tggaggagcg acgcgccgta cttccccttc cacgaaagca cggtggcctg ctggagccgg
     1921 acatcgggtt cgtcgggctc catctcgcgg gcgtcgcgga gcagggccag ggcggagtcg
     1981 agcttgccgt cccatgcggc gaggatgccg agccggtaga gggcccggac cgaaccgggg
     2041 ttgtcgtgca gcgcggcttc gtagcgggcg cgggcggtgg ggtagtcgcc tctggcccag
     2101 gcgctgtcac cggcaggcac ctgcgcggcg aggctggtgg taagagcgaa gaccagcgtc
     2161 gctaccccga ggagccgcgc gctcaccatt tcccccataa cgccttgagc gagtcgtaca
     2221 ccggcttgag ccgctgatgg taccggggcg tggtccaggt gggccagcgc caggtcggga
     2281 accgggcccg ccgccattcg ccgcggtccg cagcaggcag ggcagcaacg acctctttgc
     2341 cccgctccat catggcaact ccgactcgga tcccgtcgga ccgggtggta ccgatatcac
     2401 ccgtatcgct ctcttcgtag agaatcgtgc cggtcgacgg atcgctcacg ttgatcaatc
     2461 cccaggcgag cctgagctcg atggtgccgg ttgcccgatc gtagtaccag tcggagagcg
     2521 aggacgccgc ctcggtgcca tagcgcagcc ggccgcggtt gacgccctgc gcctggatga
     2581 actttccgtc ccgggtgaag cgcgagcggt tggtgatcac gaagagcgag tcgaaccggc
     2641 catcctgcct tggccgggtg acgacgggcc ggtgccggaa gcggccgtag tcgtccccgt
     2701 tgatgatcac gtccgcgccc gaatagggat tgtagtcggg agtgacccgg atctcgccga
     2761 tggtgtcccg cagatagacg gcgaactcga atcccacgtc gcccttgggc accccgtaga
     2821 acgttcccag gtcaggccga taggtatcca gcatgattgc gaaggtccgt tccgctccgg
     2881 ccggcagggg ccgccctgcc tgtcccgcca gctccacggc caggtaaaga tacgattcgt
     2941 ccgctccgat ccggacccgg cccatcgccc ccgattgata gctctcgagc gcctgccagc
     3001 gacggatgtc gccgcccagc accggggtgc tcacgccgtc gccggcatac atcccgagta
     3061 tgccgtagtt ctgctcagcg tccatcaggt tgtgccactg gcgggtattc tccagtggaa
     3121 tctcgtagtc gatgacgatc cagttcttct tgaaccactc gtcgatccac gcaaagacga
     3181 tcccgcccgc cgcgccggct tcgcggatct cgcgggtcag ccgggcatcg accgcggcca
     3241 tgccgatctc gtcgtgcccg ccgtggtgcc agccctgggg ctggaggtgg gccaggccac
     3301 ggctcgaggg gacgccgtac tccgagagca gcagcggaat gccggcatgg tgctgcttga
     3361 gggcgcggag gtagccgaag tagttggagc ggccttcgct cgagctggcc tggttgtaac
     3421 ccgggtcgta gagcaggaaa tcgggatagt aaggataggc gtggtagctg gcgaaccatc
     3481 cggccgggtt ggcgctcgtc gccttgatga ccatggcgtc gaggccgaga gcgtcgttct
     3541 cgtactcgat cgggtcacgc ggcagcggcc ggcccacttt cctgcgccag gcgctttcct
     3601 ctttcccggt ggcttcggtg atgtgggtca gcgggtcgag ggtgggccag ttggtgtagg
     3661 cgatcggccg gatggtgttc caggtgtcga cctcgtagcc gagcaggtag tcgcactgtt
     3721 ccgccatcca gatgtcggcc gcgctcgcct tggcggtggt ggagaggaac cggccattga
     3781 agggccccgg cgagggattc ttcgcgtcga actccttcac cgcgtacggc tcccactcgc
     3841 gcccgatgat gtagccgagc acccagcggg acacatcggc gtcgtagcgc ccgccggcat
     3901 gaccgggccg taccgggatc tccgcgttcc catgcagcag gtccaccact cggcgcatct
     3961 cctggcgaaa ctcctctcgc caggccgggt cgttgaagtc gtgctccggc ggcagctcgg
     4021 tccagacgcc gtggatcagc cagagaggct gggttgggtg cctccggttc cacgccgcca
     4081 ccgcgcgata gaacgacgcg ggaaggacag tgtagagccg gagggtattg gtgtgcatcg
     4141 cggcgagggt gtcgagccag ccggcatagg tcgccgagtc gagcggaaac tcgctcggga
     4201 acttgccggg aagcgccaca cccatgttga cgccgttgac gtagaggcgc cgccagcc
//
LOCUS       DATIFF010000736         1088 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1630346, whole genome shotgun sequence.
ACCESSION   DATIFF010000736 DATIFF010000000
VERSION     DATIFF010000736.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1630346"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            97..>1088
                     /locus_tag="VLD58_10815"
     CDS             97..>1088
                     /locus_tag="VLD58_10815"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6600 domain-containing protein"
                     /protein_id="HSB54842.1"
                     /translation="MKAIQTILGVIVLAIAPFAISAGDDPPARVGRISHISGDVDFRS
                     RYQEEPEEARLNYPVTGGNVLATGRDGRAEIRIGSTAIRAGGDTEMEFERFDDERIRL
                     RLLQGSSILRVRNAEDAAQIEIVTPQGRVQPLEPGRYRIDTQDGSDRTRISVFRGKAR
                     FDGPGSALTVRQSNSLEVEGWETQRIREEEARADDFDDWALARDRRDDALPATRYVSD
                     ETTGYEDLDRYGDWREYPDYGAVWIPRGVATDWAPYRYGRWIWVEPWGWTWVDDTPWG
                     FAPFHYGRWALIGSTWGWVPGTYVRRPVYAPALVAWIGTPGAALSISIGSAPEIG"
BASE COUNT          177 a          377 c          377 g          157 t
ORIGIN      
        1 tgccctcggg cgcaaaggga taggctgcgg tccatcggca cgcggccgga caatggtccg
       61 gcacgccgcc cgtatcagga gcacgaggaa ccaatcatga aagccatcca gaccatcctg
      121 ggcgtgatcg tcctggcgat cgcgcccttc gcgatctccg ccggcgacga tcctcccgcc
      181 cgggtcgggc gcatcagcca catttcgggc gacgtggact tccggtcccg ctatcaggaa
      241 gaacccgagg aggcccggct caattacccg gtgaccggcg gcaatgtgct ggctacgggg
      301 cgcgacggcc gcgccgagat acgcatcggc tccaccgcga tccgcgccgg cggcgacacc
      361 gaaatggagt tcgagcgctt cgatgacgag cgcatccgcc tgcgcctgct tcagggcagc
      421 agcatactgc gggtgcgcaa tgcggaggac gcggcacaga tcgagatcgt cactccccag
      481 ggccgggtac aacctctgga accggggcgt taccgtatcg acacccagga cggcagcgat
      541 cgcacccgca tctcggtctt tcgcggcaag gcccgcttcg acgggccggg ctcggcgctg
      601 accgtgcgcc agagcaacag cctggaggtg gagggctggg aaacccagcg catccgcgag
      661 gaggaggccc gggccgacga tttcgacgac tgggcgctgg cccgcgaccg ccgcgacgat
      721 gccctgccgg cgacacgcta cgtatccgac gagaccaccg gctacgaaga cctcgaccgc
      781 tacggcgact ggcgcgaata ccccgattac ggcgcggtct ggatccctcg tggggtggcc
      841 accgactggg ccccctaccg ctatggtcgc tggatctggg tcgagccctg gggctggacc
      901 tgggtggacg acacgccgtg gggcttcgcg cccttccact atggccgctg ggcgctcatc
      961 ggcagcacct ggggctgggt tccgggcacc tatgtgcgcc ggcctgtgta cgcgccggcg
     1021 ctggtggcct ggatcggcac gccgggagca gcgctctcga tctcgatcgg cagcgcgccc
     1081 gagatcgg
//
LOCUS       DATIFF010000737         1106 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_399962, whole genome shotgun sequence.
ACCESSION   DATIFF010000737 DATIFF010000000
VERSION     DATIFF010000737.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_399962"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(157..1103)
                     /locus_tag="VLD58_10820"
                     /pseudo
     CDS             complement(157..1103)
                     /locus_tag="VLD58_10820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011793369.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
BASE COUNT          167 a          342 c          416 g          181 t
ORIGIN      
        1 gagggcgact acgcctcgtg gataacggcg gacgtctacg accatatgag cgatgaggcg
       61 aagtacggcg atgggaagcc tgtgtgggag cgcatgactt ggacggagaa gaacatcacc
      121 gtataccgct cgaactggac atgggggccg tagccgctag ctgttgtttc ccaggaggtt
      181 gctcacgcgg ggctccgtag ccgggtgatg ggtgcggcgc ccccgatgcc agcgtggggg
      241 cgtcgttcat tgtagcgccg cagccaagcc ggcagggcag cccggcggcg gtacgaggtg
      301 gcgaagggcc ggccgtaggc ccattcgcgc agcagggtct ggataaagcg ctcggccttg
      361 ccgttggtgc gaggggtgta cggtcgcgtt cgcaggtgcc gggtccggat ctcggcgatg
      421 gcggcggcga agtccttgga gacgtagccg gacccgttgt cggtcatgac ccgctcgacg
      481 gtgacgccct gggccttgag ccaggcggcg gcgcggcgca agaaggccgc tgcggtggcc
      541 cccttctcgt cggggagcac ctcgacgtag gcgagccggg tgtagtcgtc gacgcagacg
      601 tggacgaatt cccagccaat gccccgcacc cgagtggcgc ggtcgccgtg gatgcggtgg
      661 ccgatcccgc ggatccgccc gagcttcttg atgtccaggt gcacgagctc gccgggccgg
      721 gtcttctcgt agcgccgtac cggcaccgga gggtcgagct tcttcaggcg ctcgagccca
      781 gcccgcttga ggatgcgtgc cacggtcgag cgggggatgg cgaggcgggc ggcgatgacc
      841 gctccggtca tccggagtcg gcgcagttct agcaccaggc gctgccagcc cgccggcact
      901 tgggtcggcg agttccgcgg ccgagagctt cggtcgagca gcccccccgg accctcatcc
      961 tcgaagcggc tcagccactt gtaggccgtt cggggactga ctcctgctgc ttccgcggcc
     1021 tccgccaccg tccagttcaa ctggttgaac cggcggacga gtagggctcg accggcaggg
     1081 gtgaatcggg cacaagagtg gatgtt
//
LOCUS       DATIFF010000738         1191 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_861241, whole genome shotgun sequence.
ACCESSION   DATIFF010000738 DATIFF010000000
VERSION     DATIFF010000738.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_861241"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..652
                     /locus_tag="VLD58_10825"
     CDS             <1..652
                     /locus_tag="VLD58_10825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54843.1"
                     /translation="LRGAPAGRAVFRFLPSIKGYLWDFPRPDHHSVGACVPPGTWRRA
                     ALDRAIEQYRLTEAGGDEQVDHQGAVIGTWNWTGGQFADLGGLDYAILGDAAGLADPA
                     IGEGIDYALRSASLAAGAYDADRGFERYPVLAQDALRAEMRRARIVLDWLYRPSVAEY
                     LVGGARRSPRKALMLMALLDAINEHGSLLGALRRSLVASPADRRLAEAVCRSPDGD"
     gene            complement(706..>1191)
                     /locus_tag="VLD58_10830"
     CDS             complement(706..>1191)
                     /locus_tag="VLD58_10830"
                     /inference="COORDINATES: protein motif:HMM:NF020698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamin/ABP280 repeat domain-containing protein"
                     /protein_id="HSB54844.1"
                     /translation="AGVDVRFAATGSNNTFAPATATTDAAGHATSAFSSTLSGSRTIS
                     ATVGGLALSQTQVVTVVPGVADPGQTTAKVPGSGHENHPTVITVQARDQFGNKLVTGG
                     SAVVVTVTGANNAGPIYATDNGDGTYTASYTPPNKGTDYVVITLGGVAISGSPYRSKV
                     G"
BASE COUNT          153 a          387 c          440 g          211 t
ORIGIN      
        1 gttgcggggg gcgccggcgg ggcgggccgt cttccgcttt ctgccttcca tcaagggata
       61 cctgtgggac ttcccccggc cggatcacca ctcggtgggg gcgtgcgttc cgccggggac
      121 ctggcggcgc gcggcgctcg accgggcgat tgagcagtat cgcctgacgg aggccggcgg
      181 cgacgagcag gtggaccacc agggcgcggt cattggcacg tggaactgga ccggcgggca
      241 gttcgccgac ctggggggcc tggactacgc gatcctggga gacgccgcgg gattggccga
      301 tccggcgatc ggcgagggga tcgattacgc cctgagatca gcgagcctgg cggccggggc
      361 ctacgacgcg gatcgcggct ttgagcgtta tccggttctc gcgcaggacg cgctccgggc
      421 ggagatgcgc cgtgcccgca tcgtgctcga ctggctgtac cggccgtccg tcgcagagta
      481 tctcgtcggc ggggctcgcc gctccccccg caaggcgctg atgctgatgg ccctcctgga
      541 tgcgatcaac gagcacggtt cgctgctcgg ggcccttcgt cgcagcctcg ttgcgagtcc
      601 ggcggaccgg cggctggcgg aggcggtctg ccggagcccg gatggggatt gagggattgg
      661 ggagatcact cccccaatcg ctcactccct caatccccca atccctcagc ccaccttgct
      721 gcgatacgga ctcccgctga tggcaactcc gccgagggtg atgacgacgt agtcggtacc
      781 cttgttcggc ggggtgtagg acgccgtgta ggtgccatct ccgttgtcgg tggcgtagat
      841 cggtccggca ttgttggccc ccgtcaccgt gacgacaacc gcgctgccgc cggtcacgag
      901 cttgttgccg aactggtcgc gcgcctgcac ggtgatcacg gtcgggtggt tctcatggcc
      961 gctgcccggt actttcgcgg tcgtctgccc cggatcggcc acgccgggaa cgaccgtcac
     1021 cacctgggtc tggctcagcg ccaggccgcc cacggtggcg gagatggtcc tcgaccctga
     1081 gagggtcgag gagaaggcgc tggttgcgtg cccagccgcg tcggtggttg cggtggccgg
     1141 tgcaaaggtg ttgttcgagc cggttgcggc gaagcggacg tctacccctg c
//
LOCUS       DATIFF010000739         1318 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_400210, whole genome shotgun sequence.
ACCESSION   DATIFF010000739 DATIFF010000000
VERSION     DATIFF010000739.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1318
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_400210"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1303)
                     /locus_tag="VLD58_10835"
     CDS             complement(<1..1303)
                     /locus_tag="VLD58_10835"
                     /inference="COORDINATES: protein motif:HMM:NF022517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSB54845.1"
                     /translation="MGAARDFAALDREAAREFGRAAREAGIRRIIYLGGLGEPSDDLS
                     AHLKSRQETGDVLRQSGVPVVEFRASVVIGSGSLSFEMVRALVERLPVLICPKWVAVA
                     AQPIGIEDLIGYLVAALELPEDCAGIFPIGGPDVVSYGDIMREYARQRGLRRWFLSVP
                     VLTPRLSSLWLGLVTPLYARVGRKLIDGLKNPTIVRDDSALRAFSIRPRSLREAIGRA
                     ASLEDAEQAATRWSDALSAGGVRTAGWGGARLGTRIVDSRAVTMEAPPSVAFAPVRRI
                     GGAQGWYCGNALWRFRGFLDLLVGGIGMRRGRRDPEVPHSGDALDFWRVEAYEPDRLL
                     RLAAEMKIPGRAWLQFEVTPQTGGGSEIRQTAIFDPAGLAGLLYWYALYPLHTIIFRG
                     MLAGIAARASSGGARPPRHITQEVLACVTYSPDLPSSSWAPR"
BASE COUNT          240 a          459 c          448 g          171 t
ORIGIN      
        1 cccgtggcgc ccacgatgag gagggaagat ccggcgaata tgtcacgcat gccagcacct
       61 cctgcgtgat atgccggggc ggccgagcgc ccccggacga cgccctcgcc gcgattccgg
      121 ccagcattcc gcggaagatg atcgtatgca gaggatagag agcgtaccag tagagcaagc
      181 cggcaaggcc ggccggatcg aagatggcgg tctgccggat ctccgaaccg ccgccggttt
      241 gcggggtgac ctcaaactgg agccaggcgc ggccggggat cttcatctcg gcggccaggc
      301 gcagaagacg atccggctcg taggcttcga cgcgccagaa gtccagggcg tctcccgaat
      361 ggggcacctc gggatcgcgc cgcccgcgac gcatgccgat gccgcccacc aggagatcca
      421 ggaatccgcg aaaccgccac agagcattgc cgcagtacca gccctgagca cccccgattc
      481 gccgcaccgg cgcgaaggct acggacggcg gggcctccat ggtcacggcg cggctgtcca
      541 cgatccgggt ccccaggcgg gcgccgcccc agccggcggt ccgcacgcca cccgccgaga
      601 gggcatcgga ccaccgcgtg gccgcctgct cggcgtcttc cagtgaggcg gcgcggccta
      661 tcgcctcgcg gagggatcgc gggcgaatgg agaaggcgcg tagtgcgctg tcgtcgcgca
      721 cgatagtcgg attcttgaga ccgtcgatca gtttccgccc cacccgagcg tagaggggag
      781 tcaccaggcc cagccaaagg ctcgacagcc gtggggtgag gacgggcacg gagaggaacc
      841 accggcgaag gccacgctgg cgagcgtact cccgcatgat gtcgccatac gagacaacat
      901 ccggcccgcc gatcgggaag atgcccgcgc agtcctcggg aagctcgagc gccgccacca
      961 ggtagccaat caggtcctcg atcccgatgg gttgggcggc aacggcgacc cacttcggac
     1021 agatcagcac cggaaggcgc tccaccaggg cgcgcaccat ctcgaaggaa aggctccccg
     1081 agccgatgac gaccgaggcg cggaactcga caaccgggac tccgctctga cgcaagacgt
     1141 ccccggtctc ctgccggctc ttcaggtggg cagacaggtc gtcgcttggt tcgccgaggc
     1201 cgccgagata gatgatgcgc cggatgccgg cctctcgggc cgccctgccg aattcccgcg
     1261 ctgcctctcg gtccagcgcg gcgaagtccc tggcggctcc catggaatgc accaggta
//
LOCUS       DATIFF010000740         1382 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1324409, whole genome shotgun sequence.
ACCESSION   DATIFF010000740 DATIFF010000000
VERSION     DATIFF010000740.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1382
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1324409"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1382
                     /locus_tag="VLD58_10840"
     CDS             <1..>1382
                     /locus_tag="VLD58_10840"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HSB54846.1"
                     /translation="QRYFGKSARDLNVAEAATLAGIPRSPTRYNPRRNPDYSVERRNL
                     ILEIMADEGVLSRQEAERWKAYPLILSTRSDFSEVAPYFTEYVRQQLRTRFGSELYKG
                     GLRIYTTVDLDMQLAAERALERQLDEIERNSQRYGKYPRPTYSDYLEKRGDDAEPPSE
                     SPYLQGLAVVLEAKTGKILAMVGGRDFNDSKFNRAIQAVRQPGSTFKPIVYTAALRAG
                     HPWSEIVVDDPISVEMLPGDPPWEPANYDSRFRGPMSLKEAFFDSRNIPAIKLGMEIG
                     PQAVIGEAARFGITTPVPPYPSVYIGSAGVIPLELISAYSAFATLGTRITPYGVDRVE
                     DRDGNVLWAPKPRTEVVMDSALAWLMLDGLRDVVRRGTAAGAVGSQFSIPAGGKTGTT
                     NDYTDVWFIGFTADLVGGVWMGMDRPQKIIENAQGGRLAAPAWTAMMKEIYERRPAPP
                     PWPRPTGLTVV"
BASE COUNT          223 a          494 c          465 g          200 t
ORIGIN      
        1 cagcggtact tcggcaagtc ggcgcgcgat ctcaacgtcg cggaggcggc gacgctcgcg
       61 gggatcccgc gttcccccac ccggtacaat ccccggcgga acccggacta ctcggtcgag
      121 cggcgcaacc tgatcctgga gatcatggcg gacgaagggg tgctgtcgcg gcaggaggcg
      181 gagcggtgga aggcctaccc gctcatcctc tccacccgct cggacttcag cgaggtggcg
      241 ccctatttca ccgaatacgt gcgccagcag ctgcgcaccc ggttcgggtc ggagctgtac
      301 aagggcgggc tccggatcta caccaccgtc gacctggaca tgcagctggc ggccgagcgg
      361 gccctggagc gccagctgga cgagatcgag cggaactccc aacggtacgg caagtacccc
      421 cggcccacct actccgacta cctcgagaaa cggggcgacg acgccgagcc gccgtcggag
      481 tccccgtacc tgcagggcct ggccgtggtc ctggaggcca agaccggcaa gatcctcgcg
      541 atggtcggcg ggcgggactt caacgacagc aagttcaacc gggccatcca ggcggtccgc
      601 cagcccggct ccaccttcaa gccgatcgtc tacaccgcgg ccctccgggc cggccacccc
      661 tggtccgaga tcgtggtcga cgatccgatc agcgtcgaga tgcttcccgg ggatcccccc
      721 tgggagccgg cgaactacga cagccgcttc cgcgggccca tgtcgctcaa ggaggcgttc
      781 ttcgacagcc gcaacatccc cgccatcaag ctggggatgg agatcgggcc gcaggcggtg
      841 atcggggaag ccgcgcgctt cgggatcacc actccggttc cgccttatcc ctcggtctac
      901 atcggctccg cgggggtcat tccgctcgag ctcatttcgg cctacagcgc ctttgccacc
      961 ctcggtaccc gcatcacgcc ctacggcgtg gaccgggtgg aggaccggga cggcaacgtg
     1021 ctctgggcgc ccaagccgcg caccgaggtc gtgatggact ccgccctggc ctggctgatg
     1081 ctcgatgggc tgcgcgacgt ggtccgccgc ggcaccgcgg cgggcgcggt cgggagccag
     1141 ttctccatcc cggccggtgg caagaccggc acgaccaacg actacaccga cgtctggttc
     1201 atcggcttca ccgccgacct ggtggggggc gtctggatgg gcatggaccg gccgcagaag
     1261 atcatcgaga acgcgcaggg tggccgcctc gccgccccgg cctggacggc catgatgaag
     1321 gagatctacg agcgccggcc ggctcccccg ccctggccac ggccgacggg actcacggtg
     1381 gt
//
LOCUS       DATIFF010000741         2943 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_708737, whole genome shotgun sequence.
ACCESSION   DATIFF010000741 DATIFF010000000
VERSION     DATIFF010000741.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2943
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_708737"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..500
                     /locus_tag="VLD58_10845"
     CDS             <1..500
                     /locus_tag="VLD58_10845"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HSB54847.1"
                     /translation="WLIRERYTRPGRLAAAGGSNGGLLMGAVLTQRPDLFRAVVVQVP
                     LLDMLRYHRFLIARLWIPEYGSADDAQQYRWLRAYSPYHHVRDGVAYPAVLLATAESD
                     TRVDPMHARKMAARLQAATGSDRPILLRLEARAGHGAGKPLNKMLDELTDTWTFVFWQ
                     LGVEV"
     gene            543..1085
                     /locus_tag="VLD58_10850"
     CDS             543..1085
                     /locus_tag="VLD58_10850"
                     /inference="COORDINATES: protein motif:HMM:NF016089.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TQO small subunit DoxD"
                     /protein_id="HSB54848.1"
                     /translation="MAYRPRSPVAVEHAAQWIAVLRIAVGLYFVKSLVTKMSIVLLGG
                     FLPFPAVSERWISVMPKIVAKQASENPILFYKQFLEGTVLTHSELFAHLTAWGETVVG
                     IGLTLGLLTGVSSLVGLFLVINYGLATQWQSPGQQGFHLLLSVLMIAFFVSRAGRTWG
                     LDGSLADSKPRSIFTRRPFS"
     gene            complement(1098..1622)
                     /locus_tag="VLD58_10855"
     CDS             complement(1098..1622)
                     /locus_tag="VLD58_10855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54849.1"
                     /translation="MIRAGLRRLLPPALALLLGAPLAAQSNAARRTDPPFHFSVEAGR
                     ELRALWDSSVTTHQERVACLGAEVRNDSVFVHRILVLRPEGADSMAIASEASIERCGP
                     PDWSGTVHSHVAEYSDGLPSATFSAQDRGVMRRWYERWHADGVFCVVYSKRNAHCEAD
                     GVVGGLRSTPRLER"
     gene            complement(1619..2701)
                     /locus_tag="VLD58_10860"
     CDS             complement(1619..2701)
                     /locus_tag="VLD58_10860"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HSB54850.1"
                     /translation="MHRNALGWSLTAFLAVAACGGGDRPAPARPAADSAAGPAAPGGT
                     LAYVTNEGSGEVTVLDVATDSAIATIPVGTRPRGARVSPDGRTLFVALSGSPRCPPTM
                     PDAECEKLKADKSKDGIGEIDLASRKVIRVLPGGSDPEAFDLSRDGTRLFVSNEDANA
                     ATFVDLASGKVVKTVSVGREPEGVELHPDGKTVWVTGETDHNITVLDTDSGKVITRIE
                     TGKRPRDLVFNADGSRAYVSSEVGGTVDIVDARAYKVLKTLKMPEGAKPMGLALSPDG
                     RRLYVANGRAGTVSLVDLGADSVVASVEVGTRPWGIGLTPDGSKLYTANGPSNNVTVV
                     DAETMKVLKKVPAGELPWGVVTGRAP"
     gene            complement(2691..>2943)
                     /locus_tag="VLD58_10865"
     CDS             complement(2691..>2943)
                     /locus_tag="VLD58_10865"
                     /inference="COORDINATES: protein motif:HMM:NF013003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HSB54851.1"
                     /translation="DLTGANLYKADLSHADLSGAKLPRANLENADLLQTDFSRADLTG
                     AKLAKADIDGAVFTGAIGIAQIQGLDQARNRDKATFDAP"
BASE COUNT          414 a         1016 c         1044 g          469 t
ORIGIN      
        1 aatggctgat ccgggagcgg tacacccgcc ccgggcggct ggcggcggcg ggcggctcca
       61 acggggggct gctcatgggg gcggtgctca cccagcggcc cgacctgttc cgggcggtag
      121 tggtccaggt gcccctgctc gacatgctac gctaccaccg cttcctgatc gcccggctgt
      181 ggatcccgga gtacggctcc gcggacgatg cccagcaata ccgctggctc cgggcctatt
      241 ccccctatca ccacgtccgg gacggcgtgg cctacccggc ggtcctgctc gccaccgccg
      301 agagcgacac tcgggtggac ccgatgcacg cgcggaagat ggcggcgcgg ctccaggcgg
      361 cgaccgggtc ggatcgcccg atcctgctgc ggctggaggc ccgcgccggc cacggcgccg
      421 gcaagccgct caacaagatg ctggacgagc tgaccgacac ctggacgttt gtgttttggc
      481 agttgggggt ggaggtttag cacagctcac caccgcaggc cggacaccag gagccccgat
      541 acatggccta ccgaccccgc tcgcccgtcg ccgtcgaaca cgcggcccag tggatcgcgg
      601 tcctccggat cgccgtgggc ctctacttcg tgaaatcgct ggtgaccaag atgagcatcg
      661 tcctgctggg cgggttcctg ccctttccgg cggtgtcgga gcgctggatc agcgtgatgc
      721 ccaagatcgt ggcgaagcag gcgtcggaga acccgatcct cttctacaag cagttcctgg
      781 aggggacggt gctgacgcac agcgagctgt tcgcgcacct caccgcatgg ggcgaaacgg
      841 tggtgggaat cggcctcacg ctgggcctcc tcaccggagt ctcgtcgctc gtgggactgt
      901 tcctggtgat caactacggt ctggcgaccc agtggcagtc gcccggccag cagggattcc
      961 acctgctgct cagcgtgctg atgatcgcct tcttcgtgtc gcgggccggc cgcacctggg
     1021 gcctggacgg ctcgctggcc gattccaagc caagatcgat cttcacccgc cgccccttca
     1081 gctgagtccg ccgggcgtca ccgctccagg cggggcgtcg accggagccc tcccaccacg
     1141 ccgtcggctt cgcagtgggc gttgcgcttg ctgtagacca cgcagaatac cccgtcggcg
     1201 tgccagcgct cgtaccaacg ccgcatcacc ccgcgatcct gcgccgagaa ggtggcggag
     1261 gggagaccgt cgctgtactc ggcgacgtgg ctgtggacgg tccccgacca gtcgggcggg
     1321 ccgcagcgct cgatcgaggc ctcggaggcg atcgccatcg aatcggcccc ctcggggcgc
     1381 agcacgagga tccgatgcac gaacaccgag tcgttccgga cctcggcccc gagacaggcg
     1441 acccgctcct ggtgggtggt gacgctcgag tcccagagcg cccgaagctc ccggccggcc
     1501 tcgacgctga agtggaacgg cgggtcggtc cgacgggccg cgttggactg ggcggcgagt
     1561 ggcgcgccca ggaggagggc gagcgccggt ggcaggaggc ggcgaagccc ggcgcgaatc
     1621 acggggcgcg gcccgtcacg acgccccagg gcagctcacc cgccggcacc ttcttcagca
     1681 ccttcatcgt ctccgcgtcg accaccgtca cattgttcga ggggccgttg gcggtgtaga
     1741 gcttgctccc gtcgggggtg agcccgatgc cccacggccg ggtgcccacc tcgacactgg
     1801 cgacgaccga atcggcgccg aggtccacca gcgaaacggt gcccgcgcgc ccgttggcga
     1861 catagagccg ccggccgtcg ggagagagcg ccagtcccat cggcttggct ccctcgggca
     1921 tcttgagcgt cttgagcacc ttgtacgccc tggcatcgac gatgtccacc gtgccgccga
     1981 cctcggagct cacgtaggcg cgggagccgt cggcgttgaa gaccaggtcc cggggccgct
     2041 tcccggtctc gatccgggtg atgaccttgc cgctgtcggt gtcgaggacc gtgatgttgt
     2101 ggtcggtctc gccggtgacc cagacggtct tcccgtcggg gtgcagctcc accccttccg
     2161 gctcccgccc gacactcacc gtcttgacca ccttcccgct cgcgaggtcc acgaaggtgg
     2221 cggcattggc gtcctcattg gacacgaaga ggcgggtgcc gtcacggctg aggtcgaacg
     2281 cctccgggtc ggacccaccc ggcaggaccc ggatcacctt cctcgaggcc aggtcgatct
     2341 caccgatgcc gtccttgctc ttgtcggcct tgagcttctc gcactccgcg tcgggcatgg
     2401 tcggggggca tcggggcgag ccgctgagcg ccacgaacag ggtccggccg tccgggctca
     2461 cccgcgcgcc ccggggacgg gtcccgaccg ggatggtcgc gatggcgctg tcggtcgcca
     2521 cgtcgaggac ggtcacttcg cccgatccct cgttggtgac gtaggcgagc gtcccgccag
     2581 gggcagcggg tccggccgcg gagtcggcgg cgggccgggc gggggcagga cgatcgcccc
     2641 cgccgcacgc ggcgactgcg aggaacgcgg tgaggctcca gccgagcgca ttacggtgca
     2701 tcgaaggtgg ccttgtcacg gttacgggcc tggtccaggc cctggatttg cgcgatcccg
     2761 atggcgccgg tgaagacggc gccatcgatg tcggccttgg cgagctttgc gccggtcagg
     2821 tcggcgcggg agaagtcggt ctgcagcagg tcggcattct cgaggttggc ccgcgggagt
     2881 ttggcgcccg agagatcggc gtgggagagg tcggccttgt agagattggc accggtcagg
     2941 tcg
//
LOCUS       DATIFF010000742         2693 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1478698, whole genome shotgun sequence.
ACCESSION   DATIFF010000742 DATIFF010000000
VERSION     DATIFF010000742.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2693
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1478698"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(135..758)
                     /locus_tag="VLD58_10870"
     CDS             complement(135..758)
                     /locus_tag="VLD58_10870"
                     /inference="COORDINATES: protein motif:HMM:NF024852.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSB54852.1"
                     /translation="MRLAVFGATGRVGRRILEYAAREGHGLRALVRDPARLPAGLGGQ
                     VIAGDVSDPAAVRTTLEGCEAVLSALGGAGLANPGTAISGGMKTIVAEMKRAGINRVL
                     AVGGSGVLDGPDGRLRSESPAFPKVFAAITREHIGTWEAFKASQLDWTMVCCPDILDG
                     ELTKRYRVSADVLPEGGSTISTEDVAWFMLQQVPLTPFVRRRVGIAY"
     gene            complement(761..1168)
                     /locus_tag="VLD58_10875"
     CDS             complement(761..1168)
                     /locus_tag="VLD58_10875"
                     /inference="COORDINATES: protein motif:HMM:NF024953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HSB54853.1"
                     /translation="MKAMELTRGATLTSWVCQLTAAAILGQTLFFKFTGAPESRYIFS
                     TLGIEPWGRIGTGVAELIAVALLLYPKTSVLGAVLAVGLMGGAIMSHLTRLGIEVQGD
                     HGLLFKLAVTVLVTSLVIVIIRRRDLPIVGARL"
     gene            complement(1268..1810)
                     /locus_tag="VLD58_10880"
     CDS             complement(1268..1810)
                     /locus_tag="VLD58_10880"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HSB54854.1"
                     /translation="MQLSLAAVRGNCHFLEQGLDLLRRVSPEVYRNPVRPGWAPVGSQ
                     FRHVLDHYRAFADGWASGRVDYDARQRNPAVEVDPAVAIAQAAEMIEALERIHVEDAN
                     RPLAVQMDPGGDQRLPDWRPSTIGRELQFLVSHTVHHYALIKLLLEDAGVSVAPDFGT
                     APSTLAHQAREQAEHPAVMS"
     gene            1953..2096
                     /locus_tag="VLD58_10885"
     CDS             1953..2096
                     /locus_tag="VLD58_10885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54855.1"
                     /translation="MQPVPTPTAIRTAIPPRYERQRERVLRILTRWQASLATPRLSPA
                     GSR"
     gene            complement(2280..>2693)
                     /locus_tag="VLD58_10890"
     CDS             complement(2280..>2693)
                     /locus_tag="VLD58_10890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54856.1"
                     /translation="KRAGLLQYAPFRLAVFEPGLPALILSWDGAGLTDRIEGQSGLLA
                     TSSSLVPVEAEESRRKLFDEALKGGMADEATFDRLHRSHLPEKGALSICMHREDAVTV
                     SLTRIVADQSIVRLGYVAGSPCEGAVEVTRVLRVA"
BASE COUNT          424 a          962 c          886 g          421 t
ORIGIN      
        1 tggccccttc ggcgctgtag ctctcggcat tccatgcggc gcaggtaggg tcaggagcta
       61 acgcgcctcc gggtccagga cccacgcccc tcgactctcg cgtctctccc acgagcctcg
      121 cctgaccgcc cgcctcaata cgcgatcccc acccgccgcc gcacgaacgg cgtaagcggc
      181 acctgctgca gcatgaacca ggcaacgtcc tcggtcgaga tcgtactccc cccttccggc
      241 aatacatcgg cactcacccg gtaacgtttg gtcagctcgc catccaggat gtcggggcag
      301 cagaccatgg tccagtcgag ctggctggcc ttgaaggcct cccacgtccc gatgtgttcc
      361 cgggtgatgg ccgcgaagac cttcggaaac gcgggcgact cgctgcggag cctgccgtcg
      421 gggccgtcga gcacacccga gccgcctacg gccagcaccc gattgatccc ggcccgcttc
      481 atctcggcga cgatggtctt catgccgccg ctgatggccg tgccgggatt ggcgaggccg
      541 gcgccgccga gcgcactcag caccgcctcg catccttcga gggtggtgcg gacggcggcg
      601 gggtcgctca cgtcacccgc aatgacctgg ccgccgagtc cggcgggaag gcgggcgggg
      661 tcacgcacca gcgcgcgaag accatggccc tcgcgcgcgg cgtattccag aatccggcgg
      721 ccgactctgc cggtcgcacc gaagacggcg agtcgcacga ctagagccgt gctcccacga
      781 tgggcaggtc gcgccggcgg atgatcacga tcacgagcga ggtcaccagc accgtgaccg
      841 cgagcttgaa caggagcccg tggtcaccct ggacctcgat gccgaggcgg gtgagatggc
      901 tcatgatggc gccgcccatc agtcccaccg cgagcacggc gcccaggacg gaggtcttcg
      961 ggtacagcag gagggcgaca gcgatcagct cggccacccc ggtgccgatc cggccccagg
     1021 gctcaatgcc gagggtgctg aagatgtacc gggattcggg ggcgccggtg aacttgaaga
     1081 agagggtctg ccccaggatc gcggccgccg tcagctggca gacccagctg gtcagggtcg
     1141 cgccccgcgt cagttccatc gctttcatcg tggtgctccg gactcgaggg tcggcctacg
     1201 ggtgaccccc gatgaacgcc gtgtcctccc cggcggttcc ctccggagcg ggtccttcat
     1261 gccccgccta gctcataacc gcggggtgct ccgcctgttc cctggcctgg tgagccagcg
     1321 tgcttggcgc ggtgccgaag tcgggggcga cagaaacgcc ggcatcctcc agcagcagtt
     1381 tgatcagggc gtagtgatgt accgtgtggc tcaccaggaa ctggagctcc ctgccgatgg
     1441 tcgacgggcg ccagtcggga agccgctggt ccccccccgg atccatctgc accgccaatg
     1501 ggcggttcgc gtcctccaca tgaatccgct cgagagcctc gatcatctcg gcggcctggg
     1561 ctatggccac cgcggggtcg acttccaccg ccgggttccg ctgccgggcg tcgtagtcga
     1621 cccgtcccga ggcccatccg tcggcaaagg cccggtaatg gtcgaggacg tggcggaact
     1681 ggcttcccac cggcgcccag cccggccgca ccgggttgcg atacacctcc ggcgagactc
     1741 ggcggaggag gtcgagaccc tgctcgagga aatggcaatt gccgcgcacc gcggccaggg
     1801 agagttgcat gggttggtcc ggaggaatga catggacata acgtctcgat gcccggcccg
     1861 gttccgtcgg gatggcgggg ccgggaactc tttgccgcac ctcggaatta gagctggtga
     1921 aggcgcttct ggccgatcac cccggaggaa cgatgcagcc cgtaccgaca ccaaccgcca
     1981 tccgcacggc catcccgccg cgctacgaac ggcagcggga acgggtcctc cgcatcctta
     2041 cccgctggca ggccagtctg gcgactcccc ggttgagccc ggcgggctct cggtgagcgg
     2101 cgacgggcgc cgcggctcgt cggtcggaca tggtgggctg acgtgatcgt ggaattcgca
     2161 gcctcgtggc cgcaagggat cggatggatc gcttagcggc gcacgggctg ctcctccacg
     2221 atcccgacag cccctccata ctcgcgcact ccagccacag cttcgggccg ccttgccgcc
     2281 tacgccactc gcaagacccg cgtcacctct accgctcctt cgcagggcga ccccgccacg
     2341 tagcccagcc gcacgatgct ctgatccgcc acgatccgtg tgaggctgac ggtgaccgcg
     2401 tcctcccggt gcatgcagat cgagagcgcg cctttctcgg gcaggtgact ccgatgcagc
     2461 cgatcgaacg ttgcctcgtc ggccatgcca cccttgaggg cttcgtcgaa gagcttccgc
     2521 cggctctcct cagcttccac cggcaccagc gaggagctgg tcgccaggag tccgctctgg
     2581 ccctcgatcc ggtccgtgag gccggcgcca tcccagctca ggatcagggc agggagtccc
     2641 ggttcgaaca ccgccagccg aaacggggcg tactggagca gcccggcacg ctt
//
LOCUS       DATIFF010000743         1408 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1171645, whole genome shotgun sequence.
ACCESSION   DATIFF010000743 DATIFF010000000
VERSION     DATIFF010000743.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1408
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1171645"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1388)
                     /locus_tag="VLD58_10895"
     CDS             complement(<1..1388)
                     /locus_tag="VLD58_10895"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB54857.1"
                     /translation="METLPVYVVLLSEDYRVPFANRFFRERFGESHGRRCFEYLFDRA
                     EPCENCESYKVLKTGAPHHWEWTGPDRRNYGIYDFPFEDTDGSRLILEMGIDVTEQKQ
                     AEAALQAAHRDLADRADQLRTLTTQLTIAEQRERRRLADVLHDELQQLLVATRLRAHM
                     LGSTTDPAVRQGAQEIVALIAEALGKTRSLTGELSPPTLQKGDLLPALEWITRWVGEK
                     HRLTVRLVPPRKPLPRVPEDTAVLLYQAVRECLLNAVKHAQASEATVTVTAAEPTLTI
                     TVADAGVGFDPTQLRVEGGPEGGIGLLGIRERLEWMGGRLEIASAPGQGSRFALVVPL
                     GQSAPRPAPFPVAAPAEAESQTRAARRLRVLVVDDHALVRRGFATLLAGEPDLEVVGE
                     ANNGQRAIEVARQTAPDVILMDINMPVMNGIDATRAIHAESPAIRVIGLSVFDDPEQS
                     DAMRQAGAAGYLR"
BASE COUNT          195 a          494 c          496 g          223 t
ORIGIN      
        1 cgcagatacc cggcggcccc ggcctggcgc atggcgtctg actgctctgg gtcgtcgaat
       61 accgagaggc cgatcacccg gatcgccgga gactccgcat ggatcgcgcg cgtggcgtcg
      121 atcccgttca tgaccggcat gttgatgtcc atgaggatga cgtccggggc ggtttgccgg
      181 gccacctcga tcgcgcgctg cccgttgttg gcctcgccga ccacctccag gtctggctcc
      241 ccggcgagga gcgttgcgaa gccgcgccgc accagggcgt ggtcgtccac caccagcacg
      301 cgcagtcggc gcgcggcgcg cgtttgcgac tccgcttccg cgggggcggc gaccgggaag
      361 ggcgcggggc gcggggcgct ctggcctagc ggaaccacca gcgcaaagcg gctcccttgg
      421 cccggggcgc tcgcaatctc cagccggccc cccatccatt caagccgctc gcgaatgccg
      481 agcaggccga tgccgccctc cggcccgcct tccacccgga gctgtgtggg gtcgaagccg
      541 acgcccgcat cggccaccgt gatggtgagg gtgggctcgg cggcggtaac cgtcacggtg
      601 gcctcgctcg cctgggcgtg ctttacggcg ttgagcaggc actcccggac ggcttggtac
      661 aggagcacgg cggtgtcttc cgggacgcgg ggcagaggct tccggggcgg cacgaggcgc
      721 accgtgagcc ggtgcttctc cccgacccag cgggtgatcc actccagggc cggcagcagg
      781 tcgcccttct gcagggtggg agggctgagc tcgcccgtga ggctgcgggt cttccccagc
      841 gcctctgcga tcagcgcgac gatctcctgg gccccctgcc ggaccgcggg gtccgtcgtg
      901 ctccccagca tgtgggcccg cagccgggtc gcgaccagga gctgctgcag ctcgtcgtgg
      961 agcacgtcgg ccaggcggcg gcgctcgcgc tgctcggcga tggtcagctg cgtcgtgagc
     1021 gtgcggagct ggtctgcgcg gtccgccaag tcccggtgcg ctgcctgcag cgccgcctcg
     1081 gcctgcttct gctcggtgac atcgatgccc atctccagga tcagccggga tccgtcggtg
     1141 tcctcaaagg ggaagtcata gataccgtag ttgcggcggt ccgggccggt ccactcccag
     1201 tgatggggtg cgccggtctt caagaccttg taactctcgc agttctcgca cggctcggca
     1261 cggtcgaaca gatactcgaa gcagcgccgg ccgtgcgact cgccgaaccg ctcccggaaa
     1321 aagcggttgg caaagggtac gcggtaatcc tccgacaaga gcaccacata gaccggcagc
     1381 gtctccaaga catcgtacag ccgctgcc
//
LOCUS       DATIFF010000744         1453 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_555243, whole genome shotgun sequence.
ACCESSION   DATIFF010000744 DATIFF010000000
VERSION     DATIFF010000744.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1453
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_555243"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..908
                     /locus_tag="VLD58_10900"
     CDS             <1..908
                     /locus_tag="VLD58_10900"
                     /inference="COORDINATES: protein motif:HMM:NF014731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HSB54858.1"
                     /translation="SERLTTGNGILLMGAASLAALLYTRGAVSHLVVMYSINVFVTFS
                     LSMFGMTRFWLAARDSAAGRRVRRIVLFGSAFLLCATILAITVFEKFREGGWVTLVVT
                     ALVVAVCFWVRGHYQAAARSVTRLYRDLHDLPETPKPGVPAEPDRAQPVAAVLVGSYG
                     GVGIHTVLNIFRAFPGHFRGLCFLSVGVVDSGEFKGEHAVEDLRRKTEEMLERYVRLA
                     QGMGIPACARYSVGTDAVEEAERLCLEAARDFPRITFFAGKMIFQRERWYDRLLHNET
                     ALAIQKRLQWAGKTVVTLPVRVREP"
     gene            1005..1310
                     /locus_tag="VLD58_10905"
     CDS             1005..1310
                     /locus_tag="VLD58_10905"
                     /inference="COORDINATES: protein motif:HMM:TIGR02605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HSB54859.1"
                     /translation="MPTYEYECPSGHVFEKFQKMTDKPRAKCPVCGKPAVRKISGGAG
                     LVFKGSGFYITDYGKDGKGPKKAPESEGSASKAEAKGEAKPDPKPKADKPAAKKAAE"
     gene            1307..>1453
                     /locus_tag="VLD58_10910"
     CDS             1307..>1453
                     /locus_tag="VLD58_10910"
                     /inference="COORDINATES: protein motif:HMM:NF015450.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54860.1"
                     /translation="MSEAIRAELARVADRLGHPDIAFVLERPRDAGHGDLATNLGMVL
                     AKLEK"
BASE COUNT          219 a          479 c          517 g          238 t
ORIGIN      
        1 tctccgagcg gctcaccacc ggcaacggca ttctgctcat gggtgcggca tcgctcgcgg
       61 cgctcctgta cacgcgcgga gccgtgagcc atctggtcgt gatgtacagc atcaacgtgt
      121 tcgtcacgtt ctcgctatcc atgttcggga tgacgcgatt ctggctggct gcgcgggact
      181 cggccgcggg caggcgggtc cgccggatcg tgctcttcgg cagcgcgttc ctgctctgcg
      241 ccacgatcct ggccatcacg gtgttcgaga agttccgcga gggcggctgg gtcacgctgg
      301 tcgtgacggc gctcgtggtc gcggtgtgct tctgggtgcg cggccattac caggccgcgg
      361 cccggagcgt cacgcggctc taccgggacc tgcacgacct gcccgagaca cccaaacccg
      421 gggtccccgc ggagccggac cgcgcccagc cggtcgcggc ggtcctggtc ggctcctacg
      481 gcggcgtggg catccatacc gtgctgaaca tcttccgggc gttccccggc cacttccgcg
      541 gtctctgctt cctgtccgtc ggggtggtgg attcggggga gttcaagggc gagcacgcag
      601 tcgaggacct ccggcggaag accgaggaga tgctcgagcg ctacgtgcgc ctggcgcagg
      661 ggatgggcat tccggcctgt gcccggtatt cggtcggaac cgacgcggtt gaggaggcgg
      721 agagactctg cctcgaggcc gcgcgtgatt tcccccggat caccttcttc gccggcaaga
      781 tgatcttcca gcgggagcgg tggtacgacc gcctgctgca caacgagacc gccctggcca
      841 tccagaagcg gctccagtgg gcgggcaaga cggtggtgac gctcccggtc cgggtgcggg
      901 agccctagcc ggctccggtc ctctcgccct tcgcgccctc ttctcctgcc ctcgccgccc
      961 tgctaagttt ggcggctgat ttcacttagg ccgccaggga cccgatgccg acgtacgagt
     1021 acgagtgccc ctcggggcac gttttcgaga agttccagaa gatgacggac aagccgcggg
     1081 ccaagtgtcc ggtctgcggc aagcctgccg tgcgcaagat ctccggcggc gcgggcttgg
     1141 tgttcaaggg gagcggcttc tacatcaccg actacggcaa ggacggcaag gggcccaaga
     1201 aggcgccgga gagcgagggc tcggcgtcca aggcggaggc caagggcgag gccaagccgg
     1261 acccgaagcc gaaggccgac aagccggctg ccaagaaggc ggccgagtga gcgaggcgat
     1321 cagagccgag ctcgcccgcg tcgccgaccg gctggggcac cccgatatcg cattcgtgct
     1381 cgagcggccc cgtgacgccg ggcatgggga tctggccacc aacctcggga tggtgctggc
     1441 caagctggag aag
//
LOCUS       DATIFF010000745         1678 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1940138, whole genome shotgun sequence.
ACCESSION   DATIFF010000745 DATIFF010000000
VERSION     DATIFF010000745.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1678
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1940138"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..1399
                     /locus_tag="VLD58_10915"
     CDS             137..1399
                     /locus_tag="VLD58_10915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase-like protein"
                     /protein_id="HSB54861.1"
                     /translation="MTVLSQSPTALDLATVRSAFPALERRVGARSVAYFDGPGGTQVP
                     RVVVEAMADYLYHHNANTHWAFPSSEETDAAIAEGRAALADFLGADPSEIAFGANMTT
                     LTFHLARALGRRWGPGDEVVITELDHHANVAPWQAVARERGITLRSVPFIPETGELDW
                     KALEQALTSGVRLLAIGAASNALGTVTDVGRAARLARAAGALTFVDAVHYAAHTPVDV
                     RALECDFLACSAYKFYGPHVGVLFGRRDLVEDLDVPKLEPAPDSSPERLETGTQNHEG
                     IAGARAAVEFLASLGEGGTRVERLREAGRRLHDHGRRLVARLWAGLSAIPGVRLYGPP
                     PAQPRTPTLAFAVKGVPAEAVARRLAALGVFVSHGDFYAATVVRKLGLAQDGLVRAGC
                     ACYTSPEEIERLIAGVGEIAALGTRGEG"
     gene            1491..>1678
                     /locus_tag="VLD58_10920"
     CDS             1491..>1678
                     /locus_tag="VLD58_10920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54862.1"
                     /translation="MATFSPPRVIRAPTGSSLSCRGWHQEAALRMLMNNLDPAVAERP
                     DELIVYGGGGKAARNWEC"
BASE COUNT          240 a          585 c          586 g          267 t
ORIGIN      
        1 gatcgcgtgc gcttccccgg cgtacatcga ggttcgcaag gcggcgcgca ccccttagga
       61 ttcatcgcgc acggggggtg aatcggcgcc atcgctgcct caccacccgc gcccgtccca
      121 ccattggagc tcggccatga ccgtcctgtc ccagtccccg acggccctcg acctcgccac
      181 ggttcggtcg gcctttccag cgctggaacg ccgagtcggt gccaggtccg tggcgtactt
      241 cgacggcccc gggggcactc aggtgccgag agtggtcgtg gaggccatgg cggactacct
      301 ctaccaccac aacgccaaca cccactgggc atttcccagc agcgaggaga ccgacgcggc
      361 gatcgcggag ggtcgtgcgg cgctggccga cttcctcggc gcggacccgt cggaaatcgc
      421 ctttggggcg aacatgacga ccctgacgtt ccacctggcg cgggcgctgg gccgtcgctg
      481 gggtccgggc gacgaggtgg taatcaccga gctggaccac cacgccaatg tggcgccctg
      541 gcaggcggtc gcgcgcgagc gcggaatcac tctccgctcc gtccccttca tcccggagac
      601 cggggagctg gactggaagg ccctggaaca ggccctcaca tccggcgtgc gcctgctcgc
      661 catcggcgcc gcctcgaatg cgctgggaac cgtgactgac gtgggccgtg ccgcccgcct
      721 ggcgcgcgcg gcgggagcgc tgaccttcgt ggacgcggtg cactatgccg cgcacacgcc
      781 cgtcgacgtc cgggcactgg aatgcgactt ccttgcatgt tccgcctaca agttctacgg
      841 accgcacgtt ggagttctgt tcgggcgtcg tgacctggtg gaggacctgg atgttcccaa
      901 gctcgagcct gcacccgata gctctcccga gcgcctcgag accggcacgc agaatcacga
      961 ggggatcgcc ggcgcccgtg ctgcggtcga attcctcgcc tccctggggg agggggggac
     1021 tcgtgtggaa cgcctgagag aggcaggccg ccggctgcac gaccacggcc gccggctggt
     1081 ggcccggctc tgggccggtc tcagcgcgat tccgggagtc aggctctacg gcccgcctcc
     1141 tgcgcaaccc cgcactccga cgctggcctt cgccgtgaag ggcgtgcccg ccgaggcggt
     1201 ggcgcggcgg cttgcggccc tgggcgtctt cgtgtcacac ggggacttct atgccgccac
     1261 cgtcgtccgg aagctcgggc tggctcagga tgggctggtg cgcgcgggct gcgcctgcta
     1321 caccagcccg gaggagatcg agcggctcat cgccggcgtc ggggagatcg ccgccctcgg
     1381 gacgaggggt gaggggtgag cagtgaacgg taagggtgtc atcccgggcc tcgattgact
     1441 ttcggctcgg gcgggcccaa ggtacggttc ccacctatct cagcgaccac atggccacgt
     1501 tctctccacc ccgggtcatc cgcgctccca ccggctccag cctgagctgc cggggctggc
     1561 atcaggaagc ggcgctccgg atgctcatga acaatctcga cccggccgtg gcggaacggc
     1621 cggacgagtt gatcgtctat ggcggcgggg gaaaggcggc ccgcaactgg gaatgctt
//
LOCUS       DATIFF010000746         1476 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_94565, whole genome shotgun sequence.
ACCESSION   DATIFF010000746 DATIFF010000000
VERSION     DATIFF010000746.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1476
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94565"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1476)
                     /locus_tag="VLD58_10925"
     CDS             complement(<1..>1476)
                     /locus_tag="VLD58_10925"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-glucosidase C-terminal domain-containing
                     protein"
                     /protein_id="HSB54863.1"
                     /translation="HQPDLNYDHPPVLREVLDVLRFWGEIGVDGFRLDAVPYLVERDG
                     TSCENLPETHAVIKRIRGEMDGAYANRMILAEANQWPSDVRPYFGDGDECHMAFHFPL
                     MPRIFMGLRLEDRVPIVDIMAHTPAIPDTCQWALFLRNHDELTLEMVTADERDYMYFA
                     YSADPQMRLNLGIRRRLSPLLDHNQHRIELLNSLLLSLPGTPVIYYGDEIGMGDNIHL
                     GDRNGVRTPMQWSADANAGFSRAPSAQLYSPVITDPIHGYQAVNVSAQQGDPSSLLQW
                     TRNMIALRKLFRVFGRGTLEFLHPETRKVLAYLRKDDREQVLCVANLSRFAQPVELDL
                     SAYEGMLPVEMLGYVEFPVIRREPYRLTLGAYGFMWFEFHGEPQSAAARVSQTLESEI
                     PLDFSRGWEDLLTGLQKERLELRLFPRFLGVQPWFAGTARRIAEAQVVDWGILGESGA
                     AVLVLVRVAFEQGEPESYTVPLAVAFAEAGDAVLAAAPAAV"
BASE COUNT          228 a          508 c          523 g          217 t
ORIGIN      
        1 ccaccgccgc gggcgcggcg gccagcacgg cgtcgcccgc ctcggcgaag gccaccgcca
       61 ggggcaccgt gtagctctcc ggctccccct gctcgaaggc cacgcgcacc agcacgagca
      121 ccgccgcccc cgactccccc aggatccccc agtccacgac ctgcgcctcg gcgatccgcc
      181 gggccgtgcc cgcgaaccac ggctggacac cgaggaagcg ggggaacagc cgcagctcca
      241 gccgctcctt ctgcagcccc gtgagcaggt cctcccagcc gcgcgagaag tcgagcggga
      301 tctcgctctc cagcgtctgc gagactcggg cggcggcgga ttgcggctcg ccgtggaact
      361 cgaaccacat gaagccgtag gcgccgagcg tgagccggta gggctcccgc cggatgacgg
      421 ggaactcgac gtaccccagc atctccaccg ggagcatccc ctcgtaggcc gagaggtcca
      481 gctcgaccgg ctgggcaaag cgcgacaggt tggcgacgca gagcacctgc tcccggtcgt
      541 ccttccgcag gtaggccagc accttgcggg tctccgggtg gaggaactcg agcgtccccc
      601 ggccgaacac ccggaacagc ttccgcagcg cgatcatgtt ccgggtccac tgcagcagcg
      661 aggacgggtc gccctgctgg gccgacacgt tcaccgcctg gtagccgtgg atcgggtccg
      721 tgatgaccgg gctgtagagc tgggcggacg gcgcgcggga aaagccggcg ttggcgtcgg
      781 cgctccactg catcggggtg cgcacgccgt tgcgatcgcc cagatggatg ttgtcgccca
      841 tgccgatctc gtcgccgtag tagatcaccg gcgtgcccgg gagcgagagc agcaggctgt
      901 tcagcagctc gatgcggtgc tggttgtggt ccagcagggg cgacagacgc cggcggatgc
      961 cgaggttgag ccgcatctgc ggatcggcgc tgtacgcgaa gtacatgtag tcccgctcgt
     1021 cggcggtgac catctcgagg gtcagctcgt cgtggttgcg caggaacagc gcccactggc
     1081 aggtgtcggg aatggccggg gtgtgggcca tgatgtccac gatagggacc cggtcctcca
     1141 gccggagccc catgaagatc cgcggcatca gcgggaagtg gaacgccatg tggcattcgt
     1201 cgccgtcgcc gaagtagggc cggacgtcgc tgggccactg gttggcctcc gccaggatca
     1261 tccggttggc gtaggcgccg tccatctccc cgcgaatccg cttgatgacg gcgtgggtct
     1321 cgggcaggtt ctcgcagctg gtcccgtcgc gctccaccag gtacgggacc gcgtcgaggc
     1381 ggaagccgtc gaccccgatc tcgccccaga agcgcagcac gtccaggacc tcgcgcagga
     1441 cgggtgggtg gtcgtagttg aggtccggct ggtgcg
//
LOCUS       DATIFF010000747         1106 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_556003, whole genome shotgun sequence.
ACCESSION   DATIFF010000747 DATIFF010000000
VERSION     DATIFF010000747.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_556003"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1106
                     /locus_tag="VLD58_10930"
     CDS             <1..>1106
                     /locus_tag="VLD58_10930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54864.1"
                     /translation="GVTGLEAAGQMTDSALARLSRLPHVTRLGLDGSQRLTDDGVLHL
                     AAMPQLEELDLSGWHSGITNRGLSVLAELGQLRQFRMCWPQRVSDTGLAGLAFCHALE
                     SVDLLGTPTGDGAIRALAGKERLRLFKSGSRVTDAGLPLLHQIPGFKAWQGGEPRYGL
                     MTYEAGPTHLMLTGDFTVPGLAALGGLDGVFGLNLSWQPSADTAGLAVLATLPHLGFF
                     GCNGDLCDDTVMTHIAAIPQLRMLMAQGAIAGDAGWKALSRSRTLEYIWGRECPNLGN
                     GGFRALATMPSLRGLGVSCRQVEDSALAVLPEFPVLRELMPMDVPDAGFRHVGRCTRL
                     ERLWCMYCRDTTDAATAELSGLSRLGTYYAGRTR"
BASE COUNT          161 a          394 c          383 g          168 t
ORIGIN      
        1 tggcgtcacc ggactggaag ccgccggaca gatgacggac agcgcgctgg cccggctctc
       61 ccgcctgcca cacgtcaccc ggctcggcct cgacggatca cagcgcctga ccgacgacgg
      121 tgtgctccat ctcgccgcca tgccgcagct cgaggagctc gacctgagcg gctggcacag
      181 cggcatcacg aatcgcggac tgagcgtgct cgcggaactc gggcagctgc gccagttccg
      241 gatgtgctgg ccccagcggg taagcgacac cggcctcgcc ggcctcgcct tctgtcacgc
      301 cctggagagt gtggacctgc tgggtacccc gaccggcgat ggcgccatcc gcgcgctcgc
      361 cggcaaggag cggctcaggt tgttcaagag cgggagccgc gtcaccgacg ccggcctgcc
      421 gctgctgcac cagattcccg ggttcaaggc ctggcaaggc ggcgagccgc gctacgggct
      481 catgacctat gaggcgggac ccacccacct gatgctgacg ggagatttca ccgtgcccgg
      541 gctcgccgcg ctcgggggac tggatggggt gttcggcttg aacctgtcct ggcagccgtc
      601 cgccgacacc gcgggcctcg cggtgctggc caccctgccc cacctcggct ttttcgggtg
      661 caacggcgac ctgtgcgacg acacggtgat gacccacatc gcggccattc cgcaactccg
      721 gatgctgatg gcgcagggag cgatcgcggg agatgccgga tggaaggcgc tgagccgctc
      781 gcggacactc gagtacatct ggggccgcga gtgccccaac ctggggaacg gcgggttccg
      841 ggcgctggcc accatgccat cgctccgcgg gctcggcgtc agctgccgtc aggtcgagga
      901 ctcggccctt gccgtgctgc cggagttccc cgtccttcgc gagctcatgc ccatggacgt
      961 gcccgatgcg gggttccgcc atgtgggccg gtgcacgcga ctggagcggc tctggtgcat
     1021 gtactgccgg gacaccaccg acgcggccac cgccgaactc tccggcctct cgcggctcgg
     1081 gacatactac gcgggaagga cccgga
//
LOCUS       DATIFF010000748         1303 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1786333, whole genome shotgun sequence.
ACCESSION   DATIFF010000748 DATIFF010000000
VERSION     DATIFF010000748.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1303
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1786333"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            106..516
                     /locus_tag="VLD58_10935"
     CDS             106..516
                     /locus_tag="VLD58_10935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54865.1"
                     /translation="MVLGLGLIAVRRPVPGWILLLAGAGLLLLTARPGYSTRERIVLD
                     DSGVTDLATKTGPIPWTDIIEAQVMQLSNTSLVTVTVTNTEHWEARTPASVRRLRVLA
                     PEMKLPPVILFTPRLDLTPEEIVREINRRAAGRR"
     gene            complement(523..>1303)
                     /locus_tag="VLD58_10940"
     CDS             complement(523..>1303)
                     /locus_tag="VLD58_10940"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSB54866.1"
                     /translation="GRLSPSLAARWAETLFFRPSRAEARPQEEEFLAEGERFSFSTSR
                     GTLAAWAWGSGPAVLLVHGWSSRTARFRVIAPALVNSGFRVVGYDHPAHGASPGKRTS
                     LLEVSETLLEVTQQTGPLHAAVGHSLGGAAIAVALSRGLSLERAVLIAPFSASPDFVA
                     RFAEMVNLPAAARDRMIQNIESRFQMRFQDLYIPSLVSKLTVPALIIHDREDLDIPFS
                     EGEAIAKAWPGAEMVEAEGVGHHGIMRDEEVAARVARFLGK"
BASE COUNT          209 a          458 c          440 g          196 t
ORIGIN      
        1 tcatcgaatc ggcgttcgga aagaagatcc tctgagttga cgcgggtcgt cgcgagcaac
       61 ctgcccttct cgcgaactcc gtggctgcta gctgggggaa tccttgtggt gctcgggctg
      121 ggcctgattg cggtgaggcg gccggtgcct gggtggatcc tgctgctggc gggtgcggga
      181 ctgctgctgc tgacggcgcg gccgggctac agcacccgcg agcgcatcgt gctcgacgac
      241 agcggtgtca ccgacctggc cacgaagacc ggcccgattc cctggaccga tatcatcgag
      301 gcccaggtga tgcagctctc gaatacctcg ctggtgacgg tgacggtgac caacaccgag
      361 cactgggaag cccggacccc ggcgagtgtg aggcggctcc gggtactggc ccccgagatg
      421 aagctgccgc cggtgatcct cttcacgccc cgcctcgacc tgacgcctga agagatcgtg
      481 cgggagatca accgccgtgc ggcggggcgc cgctgacccc cgctacttcc cgagaaagcg
      541 cgccacccgc gcggcgacct cctcgtcccg catgatgccg tggtgcccca ccccttcggc
      601 ttcgaccatc tccgctcccg gccacgcctt cgcgatcgcc tcgccctccg aaaacggaat
      661 atcgagatcc tcccggtcgt gaatgatcag ggccggcacc gtcagcttcg agaccagcga
      721 cgggatgtag agatcctgga accgcatctg gaagcggctc tcgatgttct ggatcatccg
      781 gtcacgggcg gcggcgggga gattcaccat ctcggcgaat cgggccacga agtcgggtga
      841 ggcggagaac ggcgcgatca ggactgcgcg ctccagcgat agcccccgtg acaacgctac
      901 cgcaatcgcc gccccgccca gggaatgccc cacggcggcg tggagcggcc cggtctgctg
      961 ggtcacctcg agcagtgtct ccgagacctc gagcaggctg gtgcgcttcc ccggcgacgc
     1021 cccgtgcgcc ggatgatcgt atccgactac ccggaacccc gaattgacca gcgccggcgc
     1081 gatgacccgg aagcgggcgg tgcggctgct ccatccgtgc accaggagca cggccgggcc
     1141 gctgccccac gcccaagccg cgagcgtccc gcgggaagtc gagaacgaga accgctcgcc
     1201 ttcggcgagg aactcttcct cctgcgggcg ggcctcggcc cggctgggtc ggaagaacag
     1261 cgtctccgcc cagcgggccg ccaggctggg ggagagccgc ccc
//
LOCUS       DATIFF010000749         1652 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_556136, whole genome shotgun sequence.
ACCESSION   DATIFF010000749 DATIFF010000000
VERSION     DATIFF010000749.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1652
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_556136"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..940
                     /locus_tag="VLD58_10945"
     CDS             <1..940
                     /locus_tag="VLD58_10945"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSB54867.1"
                     /translation="GVTADGEVILTSDDIMQLKRVPRAMTVVGAGVIGIEYASMFAAL
                     GVEVTLVEKRRRPLEFLDEEIVDELIHQLRKRNVLFRPGEVVDRLEIAEGTPRKAVIH
                     LDSGKRIVSDMALFSVGRQGATASLNLAAAGLDADQRGRLEVDAEFRTLIPNIFAVGD
                     VIGYPSLAATSSEQGRLAACHALGHPAGQMAQHFPIGIYAIPEISMVGETERELTDRK
                     VPYEVGVARYREIARGQILGDESGFFKMLFHREDRRLLGVHIIGTGATELLHIGQTVY
                     GLGGGLDYFLQTVFNYPTLAECYKVAALNASNKLAG"
     gene            complement(1006..1593)
                     /locus_tag="VLD58_10950"
     CDS             complement(1006..1593)
                     /locus_tag="VLD58_10950"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HSB54868.1"
                     /translation="MSRIRTLLAGVALVGVASSAMAQERNIQLQLLGGGYSHTTNLNA
                     TGPISHFRPGFNIAAAVGWNANKYVGVHGDFTFSRNQGLGVEIGNRDINHYYYGAHIE
                     FRYPVSSQFSPFIFGGAGAVTVTQRQNASVQSFPQFTKAAGMFGAGMAYSLPNAPVDI
                     LAEGKVLTYRWNALGFDRNQWDVAYSLGFAYRFKI"
BASE COUNT          274 a          561 c          552 g          265 t
ORIGIN      
        1 cggcgtcacc gccgacggcg aggtcatcct caccagcgac gacatcatgc agctcaagcg
       61 ggtgccccgc gccatgacgg tggtcggcgc cggggtcatc ggcatcgagt acgcctcgat
      121 gttcgcggcg ctgggcgtcg aggtgacgct ggtggagaag cggcggcggc ccctcgagtt
      181 cctcgacgag gagatcgtgg atgagctgat ccaccagctc cgcaagcgga acgtcctctt
      241 ccgtcccggg gaggtcgtgg accgcctcga gatcgccgag ggaacgccgc gcaaggcggt
      301 gatccacctc gactccggaa agcggatcgt ctccgacatg gcactcttct cggtcggccg
      361 gcagggtgcc acggcgtcac tcaatctcgc cgccgcgggg ctcgacgccg atcagcgcgg
      421 ccggctcgag gtggatgccg agttccggac cctgatcccc aacatcttcg ccgtcgggga
      481 cgtgatcggc tatccgagcc tcgcggcaac ctccagtgag caggggcgcc tcgcggcctg
      541 ccatgcgctc ggccacccgg cgggccagat ggcgcagcac ttcccgatcg ggatctacgc
      601 gatccccgaa atctcgatgg tgggggagac cgagcgggag ctcaccgacc gcaaggtgcc
      661 ctacgaggtg ggcgtggcgc ggtaccgcga gatcgcccgg ggccagatcc tgggcgacga
      721 gagcggcttc ttcaagatgc tcttccaccg ggaggatcgc cgcctgctcg gcgtccacat
      781 catcggcacc ggcgcgacgg agctgctcca catcggccag acggtgtacg ggctcggcgg
      841 ggggctcgat tacttcctgc agacggtgtt caactatccc acgctggcgg agtgctacaa
      901 ggtcgcggcg ctcaacgcgt cgaacaagct ggcggggtag caaacgcaga acggcccccc
      961 gaggccggat acgccccggg cggccgccct gccccctcac tccgatcaga tcttgaagcg
     1021 ataggcgaac cccagcgaat acgccacgtc ccactggttc cggtcgaagc ccagggcgtt
     1081 ccagcgatag gtcagcacct tgccctcggc caggatgtcc acgggcgcgt tgggaagcga
     1141 ataggccatc cccgccccga acattcccgc cgccttggtg aactgcggga agctctggac
     1201 gctggcattc tggcgctgcg tcaccgtcac cgctccggct ccgccgaaga tgaacggcga
     1261 gaactggctg ctcacgggat accggaactc gatgtgcgcg ccgtagtagt agtggttgat
     1321 gtcgcggttg ccgatctcca cccccagccc ctggttcctg ctgaaggtga agtccccgtg
     1381 cacccccaca tacttgttgg cgttccaccc caccgcagcc gcgatgttga agccgggccg
     1441 gaaatgcgag atgggtccgg tcgcgttgag gttggtggtg tggctgtagc cgccgccgag
     1501 cagctgcagc tggatgttcc gctcctgggc catggcggac gaggctaccc ccaccagggc
     1561 cacaccggcg agcagagtgc gaattctgga catacgattc actcctttcc cgaccgctcc
     1621 cgaaggcgcg aaggccggtg ggtgagcctt cg
//
LOCUS       DATIFF010000750         1529 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_709979, whole genome shotgun sequence.
ACCESSION   DATIFF010000750 DATIFF010000000
VERSION     DATIFF010000750.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_709979"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1457)
                     /locus_tag="VLD58_10955"
     CDS             complement(<1..1457)
                     /locus_tag="VLD58_10955"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSB54869.1"
                     /translation="MPLVLSDLVVRLLAKNAEDRYQSAEGVEADLLRAEEAWLATGTV
                     DPFPLGQDDLRDRFTIPQRLYGRETQVARLLEAFERATQGRTELVLVSGYSGIGKTAL
                     IQETYRSLARHRGEYTAGKFDQLARDIPYSALVQALQSFVRVILSETDEHLATWKSRI
                     QEALGQNGQILVDLIPELGTLLGPQPPAPPLGPTESQIRFNLVFQQFLRALARPEHPL
                     VLFLDDLQWADSATLGLLPLFLENPELGGLLLVGAYRDNEVTSSHPLAGLIRDLKSRA
                     VPLTELTLQPLESGHVHALLTETLAGDRAAAGPLADLVLAKTGGNPFFLIQFLKAMHE
                     DGRISYDRARRGWQVDLAGIRAQGFTDNVVDLMAGRIQRLGDNTQRVLRLAACVGNRF
                     DLGTLATVSQQPPGEAATTLWSAVEQGLVLAEDQSYGVAPTPEDGRPLAMRRFRFLHD
                     RVQQAAYALTPEGDRRDAHLTIGRLLLARGDDGSRS"
BASE COUNT          239 a          503 c          568 g          219 t
ORIGIN      
        1 gaccggctgc cgtcatcgcc gcgggcgagc agcaaccggc cgatggtgag gtgggcgtcg
       61 cgccggtcgc cctcgggcgt cagggcatac gcagcctgct ggacccggtc gtggaggaac
      121 cggaagcggc gcatcgccag cgggcgccca tcctccgggg tgggcgccac cccgtaggac
      181 tgatcctccg ccaggacgag gccctgctcc accgcgctcc agagcgtggt cgccgcctcg
      241 cccggcggct gctggctcac cgtggcgagc gtgccgaggt cgaagcggtt gccgacgcag
      301 gcggccagcc ggaggacccg ctgggtattg tcgcccagcc gctgaatccg tccggccatc
      361 aggtcgacca cattgtcggt gaagccctgg gcgcggatac cggcgaggtc cacctgccag
      421 ccgcgccggg cccggtcgta actgatccgg ccgtcctcgt gcatcgcctt gaggaactgg
      481 atcaggaaga agggattgcc gccggtcttg gcgagcacga gatcggccaa tgggcccgcg
      541 gcggcgcggt cacccgcgag cgtttccgtg agcagcgcgt gcacatgccc ggattcgagc
      601 ggctggaggg tcagctcggt gagcggcacg gcccggctct tgagatcgcg gatcagcccc
      661 gcgagcggat ggctgctggt cacctcgttg tcgcgatagg cccctaccag cagcaggccg
      721 cccagctcgg gattctcgag gaagagcggc agcaggccga gggtggccga gtcggcccac
      781 tggagatcgt cgagaaacaa caccagcgga tgctcgggtc gcgccagggc ccggaggaac
      841 tgctggaaga ccaggttgaa gcggatctgc gactcggtag ggcccagcgg cggcgcgggc
      901 ggctgcggcc cgagcagggt gccaagctcg gggatcaggt cgaccaggat ctggccgttc
      961 tggcccagcg cctcctggat ccgactcttc caggttgcaa ggtgctcgtc ggtctccgag
     1021 aggatcaccc tgacaaagga ctggagcgcc tgcaccaggg cggaataagg gatgtcgcgc
     1081 gccagctggt cgaacttccc ggcggtgtat tcgccgcggt ggcgggccag agaacgatag
     1141 gtctcctgga tcagcgcggt cttgccgatg ccggaatagc cggagaccag gaccagctcg
     1201 gtgcgtccct gggtcgcccg ttcaaaggcc tccagcaggc gggccacctg ggtctcgcgg
     1261 ccgtacagcc gctgggggat ggtgaaccgg tcgcggagat cgtcctgtcc cagcgggaag
     1321 gggtcgaccg tgccggtggc gagccaggcc tcctcggccc gaagcagatc ggcctcgacc
     1381 ccttccgcgc tctggtagcg gtcctcggca ttcttggcca ggagccggac caccaggtcg
     1441 gagagcacca ggggcaccga cggcaaccgg accgcaggtg gtaccggggc ctgggcgaca
     1501 tgccagtgga tcagttccag cgggtcggg
//
LOCUS       DATIFF010000751         2766 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1479939, whole genome shotgun sequence.
ACCESSION   DATIFF010000751 DATIFF010000000
VERSION     DATIFF010000751.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2766
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1479939"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..118)
                     /locus_tag="VLD58_10960"
     CDS             complement(<1..118)
                     /locus_tag="VLD58_10960"
                     /inference="COORDINATES: protein motif:HMM:NF012239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HSB54870.1"
                     /translation="MARQTPLDRYRNIGIMAHIDAGKTTTTERILYYTGKNYK"
     gene            complement(504..974)
                     /gene="rpsG"
                     /locus_tag="VLD58_10965"
     CDS             complement(504..974)
                     /gene="rpsG"
                     /locus_tag="VLD58_10965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007406077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HSB54871.1"
                     /translation="MSRRNKAVKRPVPPDPRYDSQTVSKFVNNLMYQGKKSVAEGIFY
                     TAMDLIEERTGQPGVSVFKQAVNNAKPTLEVKSRRVGGASLQVPVEVRPDRRTALAMR
                     WLISFARARTEKTMAERLAAELILASKGEGNTIKKKEDTHRMAEANRAFAHYRW"
     gene            complement(971..1369)
                     /gene="rpsL"
                     /locus_tag="VLD58_10970"
     CDS             complement(971..1369)
                     /gene="rpsL"
                     /locus_tag="VLD58_10970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006863839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HSB54872.1"
                     /translation="MPTINQLIRRGRKDVEAKDKAPALRSNPQKRGVCTRVYTTTPKK
                     PNSALRKVARVRLTNGFEVTAYIPGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGTL
                     DSAGVNDRRQSRSKYGAKRPKDAGPKGGKK"
     gene            1679..>2766
                     /locus_tag="VLD58_10975"
     CDS             1679..>2766
                     /locus_tag="VLD58_10975"
                     /inference="COORDINATES: protein motif:HMM:NF028457.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5117 domain-containing protein"
                     /protein_id="HSB54873.1"
                     /translation="MRFPRLVTLALTPALLAVVARVAPAQDAPWRPFAEVTRGSQAAR
                     GVFTTYTRRDRVLLALAPGQFDRDYLLVSQLAQGIGELGLDGGSTVRSDLVRFHREGD
                     RVELWVVNPHYGAAAGTPMARTVAYSFGHSVAWAFPIATVRDLQESEVLIDLTPFLLS
                     DWPDIGSVLQAAANARKLGTSVTLDDKRSSLQAVRLFPANLEAEARLTFQSPRSLGLE
                     SVSDYRSIPIGVHYSLLELPAVPMRPRYADERVGYFVSAHKDFSRDTAESYFVRYVNR
                     WRLEKKDPTALVSEPVAPITYYLDRTVPVEWRPYVRAGILEWNRAFEEAGFRNAIRVL
                     DPPEDSTWSAADARYSTVRWTATNRSVYA"
BASE COUNT          368 a          985 c          921 g          492 t
ORIGIN      
        1 tcttgtagtt cttgccggtg tagtagagga tgcgctcggt cgtcgtcgtc ttcccggcat
       61 cgatgtgggc catgatgccg atgttgcgat agcggtcgag cggtgtttgg cgagccatag
      121 tcccagtcgt atccagtctt ccatcagcga aaaagcgggg cgaccgagcc cgggcggcgc
      181 cgaggtcggc gcttccggtg gtatcgctcc gcgcacatcc gggcctggtg cccaggatga
      241 ggggttccag tggttcccca cgcgttgtct tcggaggatc agaggtggcg ccgccgtcga
      301 acggccccgt cacgtaatcc gatgtttcgc ggcggcacca aaaaccgcca agccttgaaa
      361 aagtagcgct ttagtccgcc atgtcaaccc tgccgaagtg gccccccacc gtccggcagg
      421 atgagggacc ggcccacaac ggaccggccc cgctcgtctc ggtgacggcg gggccgtgac
      481 gcctactctc gcgcttcggc gacctaccag cggtagtgcg cgaacgcccg gttggcctcg
      541 gccatccggt gggtgtcttc cttcttcttg atggtgttgc cctcgccctt gctggccagg
      601 atcagctccg cggccagacg ctcggccatg gtcttttccg tgcgggcgcg ggcgaacgag
      661 atgagccaac gcatggccag ggccgtccgg cggtcgggcc ggacttcgac cggaacctgg
      721 agggaggcgc cgcccacccg gcggctcttc acctcgaggg tgggcttggc gttgttgacc
      781 gcctgcttga agaccgagac ccccggttgg ccggtccgct cctcgatcag gtccatggcc
      841 gtgtagaaga tcccctcggc tacgctcttc ttgccctggt acatcaggtt gttgacgaac
      901 ttcgagacgg tctggctgtc gtaccgcggg tcgggcggca ccggccgctt gaccgccttg
      961 ttgcgccggc tcacttctta ccccccttgg gcccggcgtc cttgggacgc ttggcgccgt
     1021 acttggagcg gctctgccgc cggtcgttca ctccggccga gtcgagcgtg ccccggacga
     1081 tgtgatagcg cacccccggc aggtccttca cccggccgcc gcggatcagc acgatcgagt
     1141 gctcctggag attgtgcccc tcacccggaa tgtaggcggt gacctcgaag ccgttggtca
     1201 gtcgcacgcg ggccaccttc cggagcgccg aattcggctt cttcggggtg gtagtgtaga
     1261 cccgggtgca tacgccgcgc ttctgcggat tggaccgcag ggcgggcgcc ttgtccttgg
     1321 cctcgacgtc cttccggccg cgccggatga gctgattgat ggtcggcata acccctgaat
     1381 actcgagtct gacggtgccc gattcgggcg aagaccgcga aatgtagacg ggggatgggc
     1441 ttgggtcaag acggacggtt gccggcgccg cgcccacgtg ccgccgcctc cctgatgcgc
     1501 ctgccgcccg accctgccgc tttttgcccc gcgattctga attttgccag gcggaggcgg
     1561 gcccggcgac tccgagcatt cgggctgccg ccggcccgca ggcggcccct tccttgcccc
     1621 tggggactgg gccggcactt ccctgccggg cgtgtccaac cgcggtgcgg agcatcccgt
     1681 gcgcttccct cgtctcgtca ccctggcgct caccccggcc ctgctggccg tggtggcccg
     1741 cgtcgccccg gcgcaggacg cgccctggcg gccgttcgcc gaggtgaccc ggggcagcca
     1801 ggccgcccgc ggggtgttca ccacctacac ccggcgcgac cgggtcctcc tggcgctcgc
     1861 gccggggcag ttcgaccggg actacctcct ggtcagccag ctggcccagg gcatcgggga
     1921 gctcggcctg gacggcggga gcaccgtgcg gtccgacctg gtccgcttcc accgcgaggg
     1981 cgaccgggtg gagctctggg tggtgaaccc gcactacggc gccgccgccg gcacccccat
     2041 ggcccggacc gtggcgtatt ccttcggcca ttcggtggcc tgggcgtttc ccatcgccac
     2101 cgtccgggac ctccaggaga gcgaggtcct gatcgacctg acgccgttcc tcctctccga
     2161 ctggcccgac atcgggtcgg tgcttcaagc cgccgccaac gcgcggaagc tgggcaccag
     2221 cgtcaccctc gacgacaagc gatccagcct tcaggccgtt cgcctctttc ccgccaacct
     2281 cgaggcggag gcccggctga cgttccagag tccccggagc ctcgggttgg agtcggtgtc
     2341 cgactaccgt tcgatcccca tcggggtcca ctactcgctg ctggagctgc ccgccgtccc
     2401 gatgcgcccc cgctacgccg acgagcgggt cggctacttc gtctccgccc acaaggattt
     2461 ctcccgcgac acggcggaga gctacttcgt gcgctacgtc aaccggtggc gcctggagaa
     2521 gaaggacccc acggcgctgg tgagcgagcc ggtcgcgccg atcacctatt acctggaccg
     2581 gaccgtcccg gtcgagtggc gcccctacgt gcgagccggc atcctcgagt ggaatcgagc
     2641 cttcgaggaa gccgggttcc ggaacgccat tcgggtgctc gacccgccgg aggacagcac
     2701 ctggagcgcg gccgacgccc gctactccac cgtgcgctgg accgcgacca accgctcggt
     2761 ctacgc
//
LOCUS       DATIFF010000752         1072 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_556342, whole genome shotgun sequence.
ACCESSION   DATIFF010000752 DATIFF010000000
VERSION     DATIFF010000752.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_556342"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..335)
                     /locus_tag="VLD58_10980"
     CDS             complement(<1..335)
                     /locus_tag="VLD58_10980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54874.1"
                     /translation="MIRIWLAVLIVLVSLGVGSRPASAEWFADLFAGVSLTRDHDLRL
                     NDQGIGQGTYESVEFDRSLAWGGRAGRYFDSLPFLGLGLDFFRYYPDIGGQSVQLRGC
                     FFPGGCGTGR"
     gene            complement(340..>1072)
                     /gene="rsmI"
                     /locus_tag="VLD58_10985"
     CDS             complement(340..>1072)
                     /gene="rsmI"
                     /locus_tag="VLD58_10985"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: protein motif:HMM:TIGR00096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HSB54875.1"
                     /translation="LRAERAVRLTGTLYVVATPLGNLEDITLRALRILKEVALVACED
                     TRRTRILLTHFGIHARVTSYFEHNKLRKGARLLETLQAGQSVALVTDAGTPGISDPGF
                     LLVRQAREAGIPVVPVPGPSAVVAALSAAGVPADRFVFDGFLPVKPGRRVHRLEALRD
                     LEMTVVCYESPHRILATLDAVAQVWGEREIVVARELTKQFEEIVRGPAAGLRQRFEGG
                     TARGEFTLILPSAGFEVAGSDPMVG"
BASE COUNT          179 a          378 c          375 g          140 t
ORIGIN      
        1 cggccggtgc cgcaaccgcc cgggaagaag cagccgcgga gctgcaccga ctggccgccg
       61 atgtccgggt agtagcggaa gaagtccagg cccagcccga ggaagggtag cgagtcgaag
      121 tagcgccccg cgcggccgcc ccaggccagc gatcggtcga actcgacgct ctcgtaggtt
      181 ccctggccga tcccctgatc gttcagcctg agatcgtggt cccgggtgag actgaccccg
      241 gcgaagaggt cggcgaacca ttccgcggag gcgggacgac tccccacacc gagcgagacc
      301 agcacgatga gcacggcgag ccagatcctg atcatgcggt caccctacca tcggatcgga
      361 ccccgcgacc tcgaaacctg ccgagggcag gatcagggtg aactcccctc gcgcggtccc
      421 cccctcgaag cgctgccgga ggccggccgc cggaccgcgc acgatctcct cgaactgctt
      481 ggtcagctca cgggccacca cgatctcgcg ctcgccccac acctgggcca ccgcgtcgag
      541 ggtcgccagg atgcggtgcg gggactcgta gcagaccacc gtcatctcga ggtcgcgcaa
      601 tgcctccagc cggtggacgc gccggcctgg cttcacgggc aggaagccgt cgaagacgaa
      661 gcggtcggcg ggcacccccg cggcagacag ggccgccacc accgcggacg gccccggcac
      721 cggcaccacc gggatcccgg cctcgcgtgc ctgccggacg agcaggaagc ccggatccga
      781 gatgcccgga gtccccgcgt cggtcaccag ggccaccgac tggccggcct gcagcgtctc
      841 cagcagccgg gctcccttgc ggagcttgtt gtgctcgaag tagctcgtga cgcgggcgtg
      901 aatgccgaag tgggtgagga ggatgcgggt gcggcgggtg tcctcgcacg cgacgagggc
      961 cacttccttc aggatgcgca gggcccggag ggtgatgtct tcgagattgc ccagcggggt
     1021 ggcgacgacg tacagcgtgc ccgtcaggcg gactgctctt tctgctcgga ga
//
LOCUS       DATIFF010000753         2100 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1480000, whole genome shotgun sequence.
ACCESSION   DATIFF010000753 DATIFF010000000
VERSION     DATIFF010000753.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2100
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1480000"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(159..1970)
                     /locus_tag="VLD58_10990"
     CDS             complement(159..1970)
                     /locus_tag="VLD58_10990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54876.1"
                     /translation="MRLVRSTLALATLLFVAPPLLAQTYPSTTDPRSGLKPGRLDAGV
                     AALNMRLVSFSPKPAAFDTARGLTFINSDLAFRDRYVYQGNFAGFTIWDVSDPTRPEA
                     VAAISCITSQGDPSIYGHLLFLSAEGRGNRNDCAKGGVQDPKDHMAGVRIYDVSNPAQ
                     PRLLKNVQTCKGSHTHTIVPDPKDKGVIYIYVSGNQGARPDSELAGCKEGTDPADESN
                     SLYRLDVIKVPLAHPEQAAVVTGARIFTGLDPAPRAASRPARPARRPADSATGPAPAP
                     PPPTGPRNCHDVTAYPAMHLLAGACASYGLLVDISNPLKPVRLDAVSDTNFSLWHTAV
                     FSNDGRQVVFTDEWGGGTGPMCQATSMMEMGGNTTLTIDAKRKFTQHAYYKIPTAQSA
                     QENCVSHNGGLVPVPGRDIMVQGWYQGGISVVDFTDPDHPKELAYFDRGPIDSAPPPD
                     SVANQGGRRMSGTIGGSWGAYYWNGLVYSSELDRGLDILELLPSEQLSANELAAARLV
                     RMEQYNPQSQPHVTWPAAFPVVRAYLDQLVRGEGLSTARTTAIGQALDAAEKATGAKR
                     RSALTALAATVDRDVTAAKDPERVKAMSAAIKALAKS"
BASE COUNT          319 a          681 c          757 g          343 t
ORIGIN      
        1 cgcaccgatg cccatcaggc gctgtgggag ccagctcccg gggccggcgg cgtgggacca
       61 gcccgggttg acgccgagcg gacggatgcg cccgacggcc tcgcggcggc cggcgggcgc
      121 tcgaggcgcg atccgcaggt aggggtgccc aatacgggtc agctcttcgc gagcgccttg
      181 attgccgcgg acatcgcctt gacccgctcc ggatccttcg ccgcagtcac gtcgcggtct
      241 accgtcgcgg cgagggcagt cagcgccgag cgtcgcttgg cgccagtcgc cttctcggcc
      301 gcgtcgagcg cctggccgat ggcggtggtc cgagcggtgg agagaccctc cccgcggacc
      361 agctggtcca ggtaggcgcg caccaccggg aacgcggccg gccaggtgac atggggctgg
      421 ctctgcggat tgtactgctc catgcggacc agcctggctg ccgccagctc gttcgccgac
      481 agctgctcgc tcggcagcaa ctccaggatg tccagcccgc ggtcgagctc cgacgaatag
      541 accaggccat tccagtagta cgcaccccac gaaccgccga tggtgccgct catccgccgg
      601 ccgccctgat tggcgaccga gtcggggggc ggcgccgagt cgatcggacc gcgatcgaag
      661 taggccagtt ctttggggtg atcgggatcg gtgaagtcca ccacgcttat gccgccctgg
      721 taccagccct gcaccatgat gtcgcgcccc ggcaccggca ccagcccgcc gttgtgcgac
      781 acgcaattct cctgagccga ctgcgccgtc gggatcttgt agtacgcgtg ctgggtgaac
      841 ttccgcttcg catcgatagt cagcgtggta ttaccgccca tctccatcat ggacgtggcc
      901 tggcacatcg ggccggtgcc gccgccccac tcgtcggtga acacgacctg cctgccgtcg
      961 ttgctgaaga ccgccgtatg ccagagcgag aagttggtgt cggacaccgc gtcgagccgc
     1021 accggcttga gcggattcga gatgtccacc agcaggccgt agctggcaca ggcaccggcc
     1081 agcaggtgca tcgccgggta ggcggtgacg tcgtgacagt tcctcgggcc cgtcggtggc
     1141 ggaggtgctg gagccggacc ggtagccgaa tcagcggggc ggcgggccgg tcgagccggc
     1201 cggctggccg cgcgcggcgc gggatcgagt ccggtaaaga tccgggcgcc ggtcaccacg
     1261 gccgcctgct ccggatgggc cagcggcacc ttgatcacat cgagccggta gagggagttc
     1321 gactcgtcgg ccggatcggt gccttccttg cagcccgcca gctcggagtc gggtcgggcg
     1381 ccctggttgc ccgagacgta gatgtagatg acccccttgt ccttcgggtc cgggacgatg
     1441 gtatgggtat gcgagccctt gcaggtctgc acgttcttga ggagccgagg ctgggccgga
     1501 ttcgacacgt cgtagatgcg gacgccggcc atgtgatcct tcgggtcctg cacgccaccc
     1561 ttggcgcaat cattccggtt gccccgtcct tcggcgctca ggaacagcag gtggccgtag
     1621 atcgagggat cgccttgcga ggtgatgcag gagatggccg ccacggcctc gggtctggtg
     1681 ggatcgctca cgtcccagat ggtgaacccg gcgaagttcc cctggtagac gtacctgtcg
     1741 cggaaggcca ggtcggagtt gatgaacgtc agcccccggg cggtatcgaa cgccgccggc
     1801 ttcggcgaga aggacaccag ccgcatgttg agggcggcga cgcccgcgtc gagccgtccc
     1861 ggcttgaggc cggagcgggg gtccgtggtg ctggggtagg tctgggccag gagaggaggc
     1921 gcaacgaaca gcagggtggc gagtgcgagg gtcgagcgga ctaggcgcat cgaaagcggc
     1981 tccggctggg ggaaggaaga cctactgtgc gggcagttgg gcgagcatcc gttgcatcgc
     2041 gccgatttcg gcggtctgga cggcgaccac gtcattggca aacacgttta cgtccacctc
//
LOCUS       DATIFF010000754         1936 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_401935, whole genome shotgun sequence.
ACCESSION   DATIFF010000754 DATIFF010000000
VERSION     DATIFF010000754.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1936)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1936)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1936
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_401935"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..923)
                     /locus_tag="VLD58_10995"
     CDS             complement(<1..923)
                     /locus_tag="VLD58_10995"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HSB54877.1"
                     /translation="MSIAYHYSRRRSRSSGPPGLGLGAHDRAAWRRALATPDPIQMDA
                     GAEGELIVSRARMVLTAALIPVPLLNLVLDANTTAGVVGLIACGIALILTIGVQALLK
                     RDFYRPWLGLATSLLDVSVVSAALASFLWLGQPITTVNSRLVFEVYFIAVGATALRYD
                     ARITVAAGVAAILQYLTLVLVAHTMFDLADPGLDRLGYGSFDWATQISRLVLLGVATL
                     LAVAIVLRSQRLRRQSRSDRLTGLPNRSFFDERVQAELSRARRYGEPVSLAMIDIDQF
                     KQFNDSWGHAAGDVALRGVAAAILASIRQSDL"
     gene            complement(934..>1936)
                     /locus_tag="VLD58_11000"
     CDS             complement(934..>1936)
                     /locus_tag="VLD58_11000"
                     /inference="COORDINATES: protein motif:HMM:NF045305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="electron-transfer flavoprotein:ubiquinone
                     oxidoreductase"
                     /protein_id="HSB54878.1"
                     /translation="AWRSWQGIGSPNPQIFALGVKEVWKVKRPLDRVIHTLGWPLPRD
                     AFGGTFAYPLGSDLVALGIVIGLDYQEANLDPHVLLQRLKLHPLIRPILEGGELIEWG
                     AKTIPEGGYYALPERRSGDGLLMAGDTAGFVDVPSLKGIHYAMQSGMYAARSAFAALK
                     AGDVSKEQLAAYDRMVDQSYIVSDLYRTRNMRLAFKDGFYTGGIKAGLMTLTGGRFPG
                     SRISMHEDAERERESGQGETPFTPDGTLTFSKVDAVFKSGNATRDTIPSHLVVGRDIP
                     PDVADFYTHLCPAGVYERVGDQLRVNAPNCVDCKATDVLGPRWTPREGGSGPKYRLM"
BASE COUNT          331 a          618 c          687 g          300 t
ORIGIN      
        1 aggtcgctct gccggatcga ggcgaggatc gccgccgcca ccccccggag tgccacgtca
       61 ccggcggcat ggccccagct gtcgttgaac tgtttgaatt ggtcgatgtc gatcatcgcg
      121 agcgagaccg gctcaccgta gcgccgggcc cgggacagct cggcctggac ccgctcatcg
      181 aagaagctcc ggttgggaag gccggtgagg cggtcgctgc gcgactggcg tctgaggcgc
      241 tggctgcgga gcacgatcgc gactgcgagg agggtcgcga cgccgagcag caccaggcgc
      301 gagatctggg tggcccagtc gaaggacccg taacccagcc ggtcgagacc gggatcggcc
      361 aggtcgaaca tggtgtgagc caccagcacc agggtcagat actggaggat ggccgcgacg
      421 ccagcggcca ccgtgatgcg ggcatcgtag cggagcgcgg tcgcgcccac cgcgatgaag
      481 tagacctcga agaccaggcg gctgttgacg gtggtgatcg gctggccgag ccagaggaag
      541 ctggcgagcg cggcgctcac gaccgagacg tcgagcaggc tggtggcgag accgagccag
      601 ggacgataga agtcacgctt gaggagcgcc tgcaccccga tggtcaggat gagcgcgatg
      661 ccgcaggcga tcagtcccac aactcccgcg gtggtgttgg cgtcgagcac caggttgagg
      721 agcggaaccg ggatcagcgc cgcggtcagc accatccgcg cccgcgagac gatcagctcg
      781 ccctcggccc cggcatccat ctggatcggg tccggggtgg cgagggcccg gcgccaggcg
      841 gcacggtcgt gcgcgccgag tccaagtccg ggcgggccgc tggagcggct ccgccggcgg
      901 gaatagtggt aggcgatcga catgctggcg gggttacatc aaccggtact tcggcccgct
      961 cccgccctca cgcggggtcc agcgcggtcc gagcacatcg gtggccttgc agtcgacgca
     1021 gttgggggcg ttcacgcgga gctggtctcc cacccgctcg tacaccccgg cggggcagag
     1081 atgagtgtag aagtcggcga cgtcaggcgg gatgtcgcgg ccgaccacga gatggctcgg
     1141 aatcgtgtcg cgggtcgcgt tccccgactt gaacaccgcg tccaccttgc tgaaggtgag
     1201 ggtcccatcg ggcgtgaaag gcgtttcacc ctgacccgac tcacgttctc gctcggcatc
     1261 ttcatgcatg ctgatgcgcg aaccggggaa tcgcccgcca gtcagggtca tgagtcccgc
     1321 cttgatccct ccggtgtaga agccgtcctt gaacgccagc cgcatgttgc gggtacggta
     1381 gaggtcggag acgatgtagc tctgatccac catgcggtcg taggcggcga gctgctcctt
     1441 cgagacatcg ccggccttga gtgccgcgaa cgccgagcgg gcggcgtaca tccccgactg
     1501 catggcgtaa tgaatcccct tgagggaggg gacatcgaca aagccggcgg tgtctcccgc
     1561 catcaggagg ccgtcaccgc tcctccgctc gggcagggcg tagtacccgc cttccggaat
     1621 cgtcttggcg ccccactcga tgagttcgcc cccttcgagg atcgggcgga tcaacggatg
     1681 gagcttgagc cgctggagca ggacgtgcgg atcgagattg gcttcctggt agtccagccc
     1741 gatcacgata cccaaggcga ccaggtcgct tcccagcgga taggcgaagg tgccgccgaa
     1801 ggcatcgcgc ggcagcggcc agccgagggt gtgaatcacc cggtcgaggg gacgctttac
     1861 tttccagact tctttcacgc ccagggcaaa gatctgcggg ttgggcgagc cgatgccctg
     1921 ccagcttcgc cacgcc
//
LOCUS       DATIFF010000755         1447 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1480285, whole genome shotgun sequence.
ACCESSION   DATIFF010000755 DATIFF010000000
VERSION     DATIFF010000755.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1447
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1480285"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..749)
                     /locus_tag="VLD58_11005"
     CDS             complement(<1..749)
                     /locus_tag="VLD58_11005"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HSB54879.1"
                     /translation="MRYVRMPIEVESPEETGYDTIACNLAESSIRDRVLGDLGLDVDL
                     GRTILLYGDHRGHPGLRALLADESGAGPEQVLLTPGAAGALFIAATTLLERGDHLVVL
                     RPNYATNLETPRAIGCDISFLDLSFERGWSYGAGDIARLMTPKTRLVSLTTPHNPTGR
                     LLDPAVLGEIAALVAARGAWLLVDETYRDLSPAAPPPATTLGERVISVASLSKAYGLP
                     GLRLGWLITRSRQLNEAFLAAKEQILITGSVL"
     gene            complement(921..>1447)
                     /locus_tag="VLD58_11010"
     CDS             complement(921..>1447)
                     /locus_tag="VLD58_11010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54880.1"
                     /translation="DLTAMTVTRDTAGITVVLEFSTALVSPTSGDSNAMIAFVDLDTD
                     QDSATGSVTTVDEFRRDGGSTGMGSDYHVALTGYDPDSSVAVNNALAGVTGRIKPEFS
                     GNKVTLRIPRAMLGNDDGFLNAAAIVGTLASPTDFVPESGHLQLDGAASSIRSSLRRS
                     VFPAPGRPAGWLKG"
BASE COUNT          238 a          466 c          532 g          211 t
ORIGIN      
        1 agcaccgatc cggtgatcag gatctgctcc ttggcggcga ggaatgcctc gttgagctga
       61 cggctacgag tgatgagcca gccgagccgg aggccgggga gtccataggc cttggagagg
      121 gaggccacac tgatcacccg ctcgcccagg gtcgtggccg gtggcggggc cgcaggcgac
      181 agatcgcgat aggtctcgtc caccagcagc caggcgccgc gtgcggccac cagggcggcg
      241 atttccccga gcaccgccgg gtcgagcagc ctcccggtgg ggttatgcgg cgtggtgagg
      301 ctgaccagcc gggtcttcgg cgtcatcagc cgggcgatgt cgcccgcgcc gtagctccag
      361 ccgcgctcga agctcagatc caggaaggaa atgtcgcagc cgatcgcccg gggcgtctcc
      421 aggttggtgg cgtagttggg gcgcagcacc accaggtgat cgccccgctc gagcagggtg
      481 gtggccgcga tgaacagcgc accggccgcg ccgggcgtca gcaacacctg ctccggaccg
      541 gcaccgctct cgtcggccag cagggcccgg agaccaggat ggccgcggtg gtcgccgtag
      601 agcaggatcg tcctgccgag gtcaacgtcg agcccaaggt cgcccagcac ccggtcgcga
      661 atggagctct cggccaggtt gcaggcgatg gtgtcgtagc cggtctcctc gggagactcg
      721 acctcgatcg gcattcggac gtagcgcatg cggaactggg gagcgggtcc gggcgacggg
      781 cgacgggcga ccgctcgaag gtacagccgg gcagacactg gcgtaacggc cgcgcgcgcc
      841 ggtgccgagc ccaccagcga agacagcctc accgccggcg aggggtgagg ctgttgtgcg
      901 acccaggggt gtgtcccgcc ctagcccttc agccagcctg cgggacgtcc aggagccggg
      961 aacacgctgc gccgaagtga cgaccggatc gacgatgcgg cgccatcgag ctgcagatgg
     1021 ccactctcgg gaacgaagtc ggtcgggctc gccagggtcc cgacgatggc ggcggcgttc
     1081 aggaacccgt cgtcgttgcc cagcatcgcc cggggaatgc gcagggtgac cttgttgccg
     1141 ctgaactccg gcttgatgcg cccggtcacg ccggccaggg cattgttgac cgcgacgctc
     1201 gaatccggat cgtaccccgt cagggccaca tggtagtcgg agcccatgcc ggtggaaccg
     1261 ccgtcccggc ggaactcatc gactgtggtg actgagccgg tggcggaatc ctgatcggtg
     1321 tcgagatcca cgaaggcgat catggcattc gagtcgccgc tggtgggaga gaccagtgcg
     1381 gtcgagaact ccaggaccac ggtgatgccg gcggtgtcac gggtgaccgt cattgcagtc
     1441 aggtccc
//
LOCUS       DATIFF010000756         1109 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1173519, whole genome shotgun sequence.
ACCESSION   DATIFF010000756 DATIFF010000000
VERSION     DATIFF010000756.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1173519"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..955)
                     /locus_tag="VLD58_11015"
     CDS             complement(<1..955)
                     /locus_tag="VLD58_11015"
                     /inference="COORDINATES: protein motif:HMM:NF015644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0182 family protein"
                     /protein_id="HSB54881.1"
                     /translation="MPRRRLILILFSAALVVFVFLLPGLVGYLTDWWWFREIGYQVVF
                     IRTLVTQALLFLVLGGIAAGTLYLSLSWALRGLVPGPLVLRVGQAVPRANLTEALRRL
                     TLPLSLGVGLLVGLVATQGWQMVLQAIYQTPFGIADPIFSRDIGFYIFTLPALSAAIG
                     FLFGLALFTLVLLVPLYFVRGDLAVGPRRLIVEPSAGMHLGILLAVLLLLTALRLWMV
                     AVPDLLYSDTGPLVGGSYTDLHARLPALRITAALALLAAVAVLVGAARGRLAGYALWA
                     VGGYLSSAAIARWLFPLAMQSLIVAPTELTRESPYLRNHIVA"
BASE COUNT          226 a          343 c          433 g          107 t
ORIGIN      
        1 tggcgacgat gtggttccgg agataaggcg attcgcgggt cagttcggtg ggcgccacga
       61 tgagactctg catcgccagc ggaaagagcc agcgcgcgat cgccgccgac gacagatatc
      121 cgccgaccgc ccagagcgca tagcccgcga gtcggccgcg cgcggcgccg accagcacgg
      181 cgacggcggc caggagggca agggccgccg tgatgcggag cgccggcagc cgggcgtgca
      241 ggtcggtata gctgcctccg accagggggc cggtgtcgga gtagaggagg tcagggaccg
      301 ccaccatcca gagccggagg gcggtgagca gcagcagcac cgcgagcagg atgccgaggt
      361 gcatcccggc ggacggctcg acgatgagcc ggcgcggacc gacggcgaga tcgccgcgca
      421 cgaagtagag cgggaccagc agcaccagag tgaagagggc gaggccgaag aggaacccga
      481 tcgcggccga gagggccggc agcgtgaaga tgtagaagcc gatgtcgcgg gagaagatcg
      541 ggtcggcgat cccgaacggg gtctggtaga tcgcctgcag caccatctgc cagccctggg
      601 tggccaccag gcctaccagg aggccgacgc cgagcgagag cggcagcgtc aggcggcgga
      661 gcgcctcggt gaggttggcg cggggaaccg cctggccgac ccggaggacg aggggaccgg
      721 ggacgagacc gcggagcgcc cacgacaggc tcaggtacag cgtgccggcg gcgatgccgc
      781 ccaggaccag gaagagcagc gcctgggtga ccagggtccg gatgaagacg acctggtagc
      841 cgatctcccg gaaccaccac cagtcggtga ggtacccgac gagacccggc aacaggaaga
      901 cgaacaccac cagagcggcg gagaacagaa tcagaatgag ccggcggcgg ggcacgggcg
      961 atcctcgaat cggtgggcga ctgccatcct ctccatgcag catcgcggat cggacgggga
     1021 agtcaaggag gggagggacg actcgcgcgg cctcacctcc gcactgcggc ctgcaatcac
     1081 ggtgctgcgg gctgcctgcg gcgacaacg
//
LOCUS       DATIFF010000757         2303 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_710944, whole genome shotgun sequence.
ACCESSION   DATIFF010000757 DATIFF010000000
VERSION     DATIFF010000757.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2303
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_710944"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..250)
                     /locus_tag="VLD58_11020"
     CDS             complement(<1..250)
                     /locus_tag="VLD58_11020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54882.1"
                     /translation="MRPIAAIQGWCPWCGSHMGWWGGWGMMLWWLPVLLGVVLVIWLL
                     RRRPGGNASDRAEEALRERYARGEIDDEVYRRMLAELHR"
     gene            complement(307..>2303)
                     /locus_tag="VLD58_11025"
     CDS             complement(307..>2303)
                     /locus_tag="VLD58_11025"
                     /inference="COORDINATES: protein motif:HMM:NF015052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycoside hydrolase family 57 protein"
                     /protein_id="HSB54883.1"
                     /translation="ATLTVGERLPVALLWHFHQPLYREDQADQPPGRQRLPWVRLHAL
                     RDYYAMPALLLEHPEVHVTINVTPVLLDQLLDYAEGRAWDEALALTRIPAGRLSARQR
                     ETLLATFFDADWHGQIFPHPRYTELFTLRLQGRPFRTPDLRDLQVWFTLAWFNQAFRD
                     GPVTLVTGETTKVHRLVEKGRGFSQRDIDILLGEQTKVLRGILPLLRLLEERGQVELS
                     TTPYCHPILPLLIDSDSAGAEIARAALPARFAHPEDAEAQLRLAMRRHAEVFGRAPRG
                     VWPAEAGVSQEAGAMLARSGVGWFASDAGVLARSGVWGYQIDQPSVATRPYRVNDGRD
                     AAVFFRDPGLSDRIGFEYHRLPGADAAEDFVGRIRERFADRLAFPADHLVTIALDGEN
                     PWSAYQEDGRSFLHALYGRLAEDPELVTVTFSEFLAGNPERRVAPHPTGDLELLDPIA
                     TGSWIDEPGSARGVDLGTWIGEPEENTAWALLVHARDEIPAGEGRESLATRALYAAEG
                     SDWFWWLGRDQNSSNDQDFDDLFRSHLLAAYRTSGKSVPPELERHIVPHALVWSHVAP
                     VHEIQEGDDLIVATNCPGSLEWRYDDDIVQHSPLFRASGALGGVGRHRLNLGPIPRGT
                     RVVEFRFHCAHEGCGDDSPCRDVSWQQVGVRSPASAPIGA"
BASE COUNT          369 a          824 c          770 g          340 t
ORIGIN      
        1 ggcggtgcag ttccgccagc atccgccggt agacctcatc atcgatctcg ccccgcgcgt
       61 agcgctcccg cagcgcttct tcggcgcgat ccgaggcgtt cccgccgggg cgcctgcgca
      121 gcagccagat caccaggacc acgcccagca ggacgggcag ccaccagagc atcatccccc
      181 agcctcccca ccagcccatg tgcgacccac accagggaca ccaaccctgg atcgcggcaa
      241 tcggtctcat ccttgcctcc tcatggagtc gccgaccgca ggacccgact ccctgcgggg
      301 ccgcagtcag gcgccgatcg gggcactggc gggtgatcgg acaccgacct gctgccacga
      361 gacgtcccgg cagggcgagt cgtctccgca tccttcgtga gcgcaatgga aacggaactc
      421 cacgactcgg gtgccgcgtg gtatcggacc cagattgagc cgatggcgtc ccactccacc
      481 gagggcaccg ctggcccgga acagaggcga gtgctgcacg atgtcgtcgt cgtaccgcca
      541 ttcgagcgag ccgggacagt tggtcgcgac gatcagatca tccccctcct gaatctcgtg
      601 gaccggtgcg acgtgggacc acaccagcgc gtgtggcaca atgtgccgct ccaactccgg
      661 cgggactgac ttcccgctgg tccgataggc tgcgagcagg tggctgcgga agagatcgtc
      721 gaaatcttga tcgttgctcg agttctggtc ccgccccagc caccagaacc agtcgctgcc
      781 ttcggcggcg taaagggccc gggtggccaa gctctcccgc ccttcgcccg cgggaatttc
      841 gtctcgcgcg tgcacgagta atgcccaggc cgtgttctcc tccggctccc cgatccaggt
      901 cccgagatcc accccgcggg ccgagccggg ctcgtcgatc caggagccgg ttgcgatcgg
      961 atcgaggagc tcgagatcgc ctgtgggatg cggcgccacc cggcgctcgg ggttccccgc
     1021 caggaactca ctgaaggtga cggtgaccag ctccggatcc tcggcgagtc ggccgtacag
     1081 cgcgtgcagg aaggagcgtc catcctcctg atatgcgctc catgggttct cgccgtccag
     1141 ggcgatcgtc accagatggt cggccggaaa ggccaggcgg tcagcgaatc gctccctgat
     1201 ccggccgacg aagtcctccg cggcgtcggc gcccggcagc cggtggtatt cgaagccgat
     1261 tcgatcggag agtcccgggt cgcggaagaa caccgcggcg tcccgaccgt cgttcacccg
     1321 atacggccgg gtcgccaccg acggctggtc tatctggtac ccccacaccc ccgaccgggc
     1381 caggaccccg gcatcactgg cgaaccagcc cacgcccgac cgggcgagca tggccccagc
     1441 ctcctggctc accccggcct cggccggcca cacgccgcgc ggcgcccggc cgaacacctc
     1501 ggcatggcgc cgcatggcga ggcggagctg cgcctccgcg tcctccgggt gagcgaaccg
     1561 ggccggcagg gccgcccgcg caatctcggc gccagccgag tcgctgtcga tgaggagcgg
     1621 gagaatcggg tggcagtagg gcgtcgtcga gagctccacc tgccctcgct cctccagcag
     1681 ccggagcagt ggcagaatcc cgcgcagtac cttcgtctgc tccccgagca ggatgtcgat
     1741 gtcgcgttga gagaagccgc ggcccttttc cactaggcgg tggaccttcg tggtctcgcc
     1801 cgtcaccagg gtcaccggac cgtcccggaa cgcctggttg aaccaggcca gggtgaacca
     1861 cacctgcagg tctcgcaggt cgggcgtccg gaagggccgg ccctggagcc ggagggtgaa
     1921 gagctcggtg taccgcgggt ggggaaagat ctgcccgtgc cagtccgcgt cgaagaaggt
     1981 ggcgagcagc gtctcgcgtt gccgcgcgga gagtcgcccg gccggaatcc gggtgagcgc
     2041 gagggcctcg tcccacgccc gcccctcggc atagtcgagc agctggtcga gcagcaccgg
     2101 cgtgacgttg atcgtcacgt gcacttcggg atgctccagt agcagcgcgg gcatcgcgta
     2161 ataatcccgc agcgcgtgga gccgcaccca cggcagccgc tggcggccag gcggctggtc
     2221 cgcctggtcc tcgcgataca gcggctggtg gaagtgccag agcagggcga cgggaagccg
     2281 ctcgcccacc gtgagcgtgg ctt
//
LOCUS       DATIFF010000758         2036 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1787522, whole genome shotgun sequence.
ACCESSION   DATIFF010000758 DATIFF010000000
VERSION     DATIFF010000758.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2036
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1787522"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..184)
                     /locus_tag="VLD58_11030"
     CDS             complement(<1..184)
                     /locus_tag="VLD58_11030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54884.1"
                     /translation="MAIDTAGRRNRSWAFAVVAAFLAITVASYSANELYIYLAAYLWF
                     GFIYGMCLQYGRFCFSS"
     gene            603..1097
                     /locus_tag="VLD58_11035"
     CDS             603..1097
                     /locus_tag="VLD58_11035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54885.1"
                     /translation="MSDRTQAAELARRSGAAAVPLVLVRPAEAAAGVAEEQLAYANLL
                     DIGMKVGFLSLLATFAAYLAGVFAPHVPVSDLPRYWAMPVKAYLAATGVRPGWGWIHM
                     LDKGDFLTFVGIALLSGVTIICYVSIIPIFLRKGNRLYGVLSLVEVLVLAMAASGLLT
                     AGGH"
     gene            1161..>2036
                     /locus_tag="VLD58_11040"
     CDS             1161..>2036
                     /locus_tag="VLD58_11040"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HSB54886.1"
                     /translation="MAVVLAAGIAQASAFPGAASAAAPASAMPWWAWPAILLFVTFVL
                     GIFAVLGGVGGGVLFVPIIGGFFPFHLDFVRGAGLLVALAGALAAGPGLLRKGLADLK
                     LAIPVALIASTCAIAGALIGLALPTRVVQIALGATILGIVALMLVSRKSDYPEVRKAD
                     SLSTALRINGIYHEASTGQDIDWKIHRTAQGLAAFVVIGVMAGMFGLGAGWANVPVLN
                     LLMGAPLKVSVATSKFLLSITDTSAAWIYVNNGAVLPMLVAPSVIGIMLGSIVGVRIL
                     ARTRPAAIRTIVIGLL"
BASE COUNT          287 a          710 c          686 g          353 t
ORIGIN      
        1 ccgaggagaa gcagaacctg ccgtactgga ggcacatccc gtagatgaac ccgaaccaca
       61 ggtaggcggc gaggtagatg tacagctcgt tggcggagta gctggccacg gtgatcgcca
      121 ggaaggccgc caccacggcg aaggcccagg accggtttct cctgcctgcg gtgtcgatcg
      181 ccaagtgctt tcctcccgga agtgcggccg gcaactcgca ggctccacgt tccgccgcac
      241 cgatgacctc tggtcgcatg gattctccgg cagtaggttg ctggaaattg tcccgcatgt
      301 tgcccgcaat ctccggggca tttcaatacg caacccttgg atttgcccga taaaggcgct
      361 tgatgtcgcc gttcccggcg gacgtccggt cgccctgacg cggatcaatc ccgggtgcgc
      421 aaggcagcgc aagcgctcgg gatccgcgcc ggcgcaggcc gcgcgcgcga ccggccggcg
      481 ggaggtgcgg cccgccgggc ccagcgcagg catcagccgc ttctatcgcc gcaatggaaa
      541 ctctcacttt gacccatcgg gcgcaatcgt gcaacggtcg caaagtaaag acagggggat
      601 tcatgagcga ccggacgcag gcagcggagc tcgcgcggcg cagcggcgct gccgccgtgc
      661 cactggtcct ggtgcgaccg gcggaggcag ccgccggcgt tgcggaggag cagctggcct
      721 acgccaacct gctcgacatc gggatgaagg tcggtttcct ttcgctgctc gccaccttcg
      781 ccgcctatct ggcgggggtg ttcgcgccgc acgtgccggt gagcgacctc ccccggtact
      841 gggccatgcc ggtcaaggcc tatctcgccg cgaccggggt gcgcccgggg tggggatgga
      901 tccacatgct ggacaagggc gatttcctga cattcgtcgg catcgcacta ttgtccggcg
      961 tcacaatcat ctgctatgtg tcgatcatcc ccatattcct gaggaagggc aatcggctct
     1021 acggggtgct ctccctggtc gaggtcctgg tgctggcgat ggccgcgtcg ggcctgctca
     1081 cggccggagg ccactgagaa ccgatgccgg cgcggagccg acccgggctt gcgaggccgc
     1141 cgggcgcggc gtgggtcgtc atggccgtcg tcctggcggc ggggatcgcg caggccagcg
     1201 cctttccggg cgcggcctcg gccgcggccc ccgcctccgc catgccctgg tgggcctggc
     1261 cggcgatact cctcttcgtc accttcgtgc tcgggatctt cgcggtgctc ggcggggtgg
     1321 gcggcggcgt gctcttcgtc cccatcatcg gcggcttctt cccgttccac ctcgacttcg
     1381 tgaggggggc gggcctcctg gtcgccctgg cgggtgcgct ggccgccggc ccgggcctcc
     1441 tccggaaggg cctggccgac ctgaagctcg ccatccccgt ggcgctgatc gcctcgacgt
     1501 gcgccatcgc gggggcgctg atcgggctcg ccctcccgac ccgcgtcgtg cagatcgccc
     1561 tgggagcgac catcctcggc atcgtcgcgt tgatgctggt gtcgaggaag tccgactacc
     1621 ccgaggtccg caaggcggac agcctctcca ccgccctccg catcaatggc atctaccacg
     1681 aggcctccac gggccaggac atcgactgga agatccaccg cacggcccag ggactggcgg
     1741 ccttcgtcgt catcggggtc atggccggca tgttcggcct gggggcggga tgggccaacg
     1801 tgccggtcct gaacctcctc atgggcgccc cgctcaaggt gtcggtcgcc accagcaagt
     1861 tcctgctctc catcaccgac acctcggctg cctggatcta cgtgaacaac ggagcggtcc
     1921 ttcccatgct cgtggcgccg tccgtcatcg gcatcatgct cggatcgatc gtgggcgtcc
     1981 ggatcctggc ccggaccagg ccggcggcca tccgcaccat cgtcatcggc ctgctc
//
LOCUS       DATIFF010000759         1084 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1633827, whole genome shotgun sequence.
ACCESSION   DATIFF010000759 DATIFF010000000
VERSION     DATIFF010000759.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1633827"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..407)
                     /locus_tag="VLD58_11045"
     CDS             complement(<1..407)
                     /locus_tag="VLD58_11045"
                     /inference="COORDINATES: protein motif:HMM:NF020397.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HSB54887.1"
                     /translation="MKAPPSPVRMPGKAKSKAKGMSRASKPDTSATKSKSPPKAGAKA
                     KPGASKVKPIGMRREPATGEPASRLIGQRIRDLGGWRGETLARMRALILEADPEMTEE
                     WKWMGTPVWSHHGIVCTGEAYTKVVKLTFARGA"
     gene            complement(692..>1084)
                     /locus_tag="VLD58_11050"
     CDS             complement(692..>1084)
                     /locus_tag="VLD58_11050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54888.1"
                     /translation="GAATDELDLDRRRQREVVDAFLAAARGGDFDALLRVLDPDVVLR
                     SDGGGVAPTRIVRGARNVAGGAVAYSAHAQPGTIRPVLVNGVAGVAVFDRRGEPFSLL
                     AFTVARGRIVEINILADRERLGPLLGSI"
BASE COUNT          146 a          404 c          358 g          176 t
ORIGIN      
        1 ctggcccccc gggcgaacgt gagcttcacg accttcgtgt acgcctcccc ggtgcagaca
       61 atcccgtggt gcgaccagac cggagtgccc atccacttcc actcctcggt catctcgggg
      121 tcggcttcca ggatcagcgc ccgcatgcgg gccagggtct ccccgcgcca tccccccaag
      181 tcgcggatcc gctggccgat gagccgggaa gcgggctccc cggtcgctgg ctcacgcctc
      241 ataccgatcg gcttgacctt gctcgcaccc ggcttggcct tcgcgcctgc cttcggcggg
      301 gacttggact tggtggccga cgtgtctggc ttgcttgcgc gcgacatgcc cttggctttc
      361 gacttcgctt tgccaggcat gcgcaccgga ctcggcggcg ccttcataat gatggcggcc
      421 tcacgtagag gttcatgatc ttgagtctca ttagggtctc ctccgggttt gtcacgttgg
      481 ccagtcgtgg cccgtcggtc aagtgacgaa acccggcctg gagaatgtga ccggatggat
      541 cgagactggc cggccaaggg gctcgaggca gccgcgccca cctgacctcc gtggcctacc
      601 gcatacgtgg ctcccggacc ggcagtcctg gcggcgcctg aggcaggtcc gggatggcgg
      661 cctcctggcc cgacggcggg gcctaggcct cctagatcga gccgagcagc ggccctagtc
      721 gctcccggtc cgcgaggatg ttgatctcga cgattctccc ccgtgcgacc gtgaacgcca
      781 ggagcgagaa cggctcgccg cgccggtcga acaccgcgac ccccgccacc ccgttcacca
      841 gcaccggccg gatcgtgccg ggctgcgcgt gcgccgagta ggcgaccgcg ccgccagcca
      901 cgttgcgcgc gccgcgcacg attcgggtcg gcgccacgcc gccaccgtcg ctccggagca
      961 ccacgtcggg gtcgagcacg cggagcagcg cgtcgaagtc cccgccgcgc gcggcggcca
     1021 gaaaggcgtc caccacctcc cgctggcgcc ggcggtcgag gtccagctca tccgtggcgg
     1081 cgcc
//
LOCUS       DATIFF010000760         2722 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_403434, whole genome shotgun sequence.
ACCESSION   DATIFF010000760 DATIFF010000000
VERSION     DATIFF010000760.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2722
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_403434"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(152..607)
                     /locus_tag="VLD58_11055"
     CDS             complement(152..607)
                     /locus_tag="VLD58_11055"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HSB54889.1"
                     /translation="MRTVDHRRIEASPASVFQAASEVERWPEILGHYRYVRMLERRSD
                     GGIVEMSANRPFGPLNWPTWWVSEMWVDPGARQVRYRHIRGITRGMDVVWQVEPDGEG
                     TSATIVHEWTGPAWPLIRRPAAEWVIGPVFVHGIASRTLAGIARSCEKK"
     gene            complement(607..1299)
                     /locus_tag="VLD58_11060"
     CDS             complement(607..1299)
                     /locus_tag="VLD58_11060"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSB54890.1"
                     /translation="MSDPHFLTPFGDELLDHPDADPTTVATSLHHIARSNFWFGGWWA
                     VRRGLARLLADVPRGSTLTLLDVGTGNGDLPARAVAWAHRQGITLKPIGIERHRTAAM
                     LASRRGMATLLGCAGALPVRPRSVDLVLASQLAHHLSPQANVEFFQAAHRAARLGVVI
                     ADLRRSPLALAGFWFGSRIFRFDPATRADGLTSVMRGFLPGELSALLREAGIAARVER
                     SPGFRLVASWSV"
     gene            complement(1296..1781)
                     /locus_tag="VLD58_11065"
     CDS             complement(1296..1781)
                     /locus_tag="VLD58_11065"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HSB54891.1"
                     /translation="MKPDVNPALFRQLLGRFATGVTVLTTRDQEGRPVGMTASSLASV
                     SLTPPLLSVCIDFTADMHRALSAAGSFVINVLASDQEEISRRFAELTPEERFTGIAWK
                     ETGDGLVMLGGALAHIECERYADFPLGDHTLFVGRVTGGTVAEGDPLLYFRGGYGSFH
                     P"
     gene            complement(1778..>2722)
                     /locus_tag="VLD58_11070"
     CDS             complement(1778..>2722)
                     /locus_tag="VLD58_11070"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HSB54892.1"
                     /translation="RLTGRFPGGGLGLAVARRILDARLVEAARGAGAEIREGCVVEEL
                     LYEQGAVAGAVVRDRGGEAKVLRSRIVIGADGLRSLVARRIGRRRYGAPSRLALVAHV
                     GEVTGLDGHAEMHLGVQGYVGLNRIGDGVANVALVLPRKLARGASGRVPSFFFEQLER
                     FPGVAGRVRPDLVVREIMVTGPFAAWSGRIVTDGALLVGDAADFFDPFTGEGIYSALK
                     GAELAAGVLDPVLRATSGVIPGWRLQPYRAARRAAFTGKWLVERLVGYGMLAPRLFSR
                     AVRKLDEHGLGDTFVGVTADLLPARAVLNPAFLSRMVL"
BASE COUNT          466 a          996 c          897 g          363 t
ORIGIN      
        1 cgacgccaat gccggtaatg acgactctgc gcgggttcat ggctgcgccg taggttcagg
       61 ttgatgaagg gagaagtgag aagggagaag ggagagggac ccctcgacct ctcgaccgct
      121 cgaccccttc tcccttctca cttctcactt ctcacttctt ctcacagctc cgcgcgattc
      181 ccgccagggt tcgcgacgcg atgccatgca cgaataccgg cccgatcacc cactctgctg
      241 ccggccgccg gatgaggggc caggccggcc cggtccactc gtgcacgatc gtggcgctgg
      301 tgccctcgcc gtcgggctcc acctgccaga ccacatccat gccacgggtt attccgcgga
      361 tgtgccggta gcggacctgc cgcgcgcccg ggtcgaccca catctccgat acccaccagg
      421 tcggccagtt gagcgggccg aagggccggt tggcgctcat ctcgacgatc ccgccgtcgg
      481 accgccgctc cagcatacgt acgtaccgat agtggccgag gatctccggc cagcgttcca
      541 cctcgctcgc ggcctgaaac accgaggcgg gcgacgcctc gatccggcga tggtcgaccg
      601 tgcgcatcag acgctccagc tcgcgaccag ccggaacccc ggactccgct ccacccgggc
      661 ggcgattcct gcctctcgga gcagggcgga cagttctccc gggaggaacc cccgcatcac
      721 cgaagtcagt ccatccgcgc gggtggcggg gtcgaaccgg aagatgcggg agccgaacca
      781 gaatcccgcc agcgccagcg gactgcgacg gagatcggcg atcaccacgc cgaggcgtgc
      841 ggcccgatgc gcggcctgaa agaattcgac attggcctgc gggctcagat ggtgcgccag
      901 ctggcttgcg agcaccaagt ccacactgcg gggacgcacc ggcagggcgc cggcacaccc
      961 gaggagcgtg gccatccccc ggcgactcgc cagcatggcc gcggtacggt gccgctcgat
     1021 cccgatcggc ttgagggtga tcccctgccg gtgggcccag gccaccgctc gagcggggag
     1081 gtcgccgttg cccgtgccca cgtccaggag cgtcagggtc gagccgcgtg gcacgtcggc
     1141 gaggagccgg gccagtcccc gccgcacggc ccaccagccg ccgaaccaga agttggatcg
     1201 cgcgatatga tgcagcgagg tcgccaccgt ggtgggatcg gcatcgggat gatccagcag
     1261 ctcgtcgccg aacggggtga ggaagtgagg gtcactcatg gatgaaagct gccgtagcca
     1321 ccccggaaat agagcagcgg atcgccctcg gccaccgtgc cgccggtcac cctccccacg
     1381 aagagggtgt gatcccccag ggggaagtcg gcgtaccgct cgcattcgat gtgcgcgagc
     1441 gcgccaccca gcatcaccag cccgtccccg gtttccttcc acgcgatgcc ggtgaaccgc
     1501 tcctccgggg tcagctcggc aaagcggcgc gaaatctcct cctggtccga ggcgagcacg
     1561 ttgatcacga agctgcccgc ggcggatagc gcccggtgca tgtcggcggt gaagtcgatg
     1621 cacaccgaga ggagcggcgg ggtgagcgag accgacgcca ggctcgaggc ggtcataccg
     1681 acgggacggc cttcctggtc ccgggtggtg agcaccgtga cgccggtagc gaagcggccg
     1741 agcaactgcc ggaagagcgc cggattcaca tcgggtttca cagcaccatc cgcgaaagaa
     1801 acgccgggtt gagcactgcg cgggccggca ggagatcggc ggtgaccccg acgaaggtgt
     1861 cgcccaggcc gtgctcatcc agcttccgca ccgcccggct gaagagccgc ggcgccagca
     1921 tgccgtagcc caccagccgc tccaccagcc acttgccggt gaaggcggcc cgccgcgctg
     1981 cacgataggg ctgaagccgc caccccggga tcacgccgct ggtcgcgcga agcaccgggt
     2041 cgagcacacc ggctgcgagc tccgcaccct tgagggcgct gtagatgcct tcacccgtga
     2101 acgggtcgaa gaagtcggcg gcgtctccca ccagcagcgc gccatcggtg acgatccggc
     2161 ccgaccaggc cgcgaagggt ccggtcacca tgatctcgcg gacgaccagg tcaggacgca
     2221 cccggccggc cacaccgggg aagcgctcga gctgctcgaa gaagaaggaa ggcacccggc
     2281 cactggctcc ccgggcaagc ttgcgcggca gcaccagcgc cacgttggcc acgccgtccc
     2341 caatccggtt gagtcccacg tacccctgaa cgcccaggtg catttcggcg tgtccatcga
     2401 gtccggtcac ctcacccacg tgagccacca gcgcgaggcg gctgggcgcg ccgtagcgcc
     2461 ttcgcccgat ccgccgcgcc accaacgaac gcaggccgtc ggcgccgatc acgatccgcg
     2521 agcggagcac tttcgcctcg cccccgcggt cacggaccac tgctccagcg accgcgccct
     2581 gctcgtagag cagctcttcg acgacacacc cttcgcgaat ctccgccccg gccccgcggg
     2641 cggcctccac cagccgggcg tcgagaatcc gtcgcgccac ggcgagaccc aggcccccac
     2701 cgggaaagcg gccggtgagc cg
//
LOCUS       DATIFF010000761         1475 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2249985, whole genome shotgun sequence.
ACCESSION   DATIFF010000761 DATIFF010000000
VERSION     DATIFF010000761.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1475)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1475)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1475
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2249985"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..838)
                     /locus_tag="VLD58_11075"
     CDS             complement(<1..838)
                     /locus_tag="VLD58_11075"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB54893.1"
                     /translation="MTGPALELRGIRKEFRIRRSLREALRAPLRTGRITALDGISLDV
                     AEGEFFGVLGENGAGKTTLFKILSTLTTADAGTACIFGIDVAREQSQIRHLLAPVLVS
                     DRSLAWRLSALENLRLYGGLHRLGRREADQRAGELLTLVGLADTGARLVGTFSSGMKQ
                     RLLLARALMARPRMLLLDEPTRSLDPVAARSFREFLRRDVGRSQGCTVILATHDPDEV
                     RDLCDRVGVLHQGRLVAMGTVQALSAPLGYHRYRLVTRAPEHPAVLGLAALGARLGRI
                     EAQ"
     gene            complement(835..>1475)
                     /locus_tag="VLD58_11080"
     CDS             complement(835..>1475)
                     /locus_tag="VLD58_11080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54894.1"
                     /translation="LGRVLSTSMHFEGALVLHGSAVAYPAGAVVFLAPKHSGKSTLAL
                     ALTMAGARLVSDDTIAVLDPESERPLVRPGIHSMRLFPDSVSRLLGDAVGEHRVDGKL
                     IISDLAAGQLQEETLPLAAVYLLASAESIEAGRAVGRRPVMQPLAAAAMVGQGKISEM
                     LGPAEAPVLLRRAARVASRVPVYQLAVHHDLARLPEVASRMAEWHGTGDGPV"
BASE COUNT          242 a          532 c          505 g          196 t
ORIGIN      
        1 cctgcgcctc gatccggccg agccgtgcgc cgagggccgc cagcccgagc accgctgggt
       61 gctccggggc ccgggtcacc agccggtacc gatggtagcc gagcggcgcc gacaacgcct
      121 gcaccgtgcc catcgccacc aggcgtccct ggtggagcac acccacccgg tcgcacaggt
      181 cgcgtacttc gtccgggtca tgggtggcga gaatcacggt gcaaccctga gagcgcccca
      241 catcgcgccg gagaaactcc cggaagctcc gggcggccac cggatcgagg cttcgggtcg
      301 gctcgtcgag cagcagcatc ctggggcggg ccatcagcgc ccgcgccagc aggagccgct
      361 gcttcatgcc ggacgagaag gtgccgacca gccgcgcgcc agtgtcggcc aggcccacca
      421 gcgtgagcag ttccccggcc cgctggtccg cctcccgccg tcccagtcgg tggagcccgc
      481 catagaggcg caggttttcg agggcactca ggcgccaggc gagggagcgg tcgctcacca
      541 gcaccggtgc caggaggtga cggatctggc tttgctcgcg ggcgacatca atcccgaaga
      601 tgcaggccgt gccggcatct gcggtggtga gagtcgagag aatcttgaag agggtcgtct
      661 tcccggcccc attctccccc aggacgccaa agaattcacc ctccgcgaca tcgagggaaa
      721 tcccgtccag cgcggtgata cgcccggtcc gcaggggcgc ccgcaaagct tcgcgcaggc
      781 tgcgacggat ccggaactct ttccggatgc cccgaagctc gagcgctggc ccggtcatac
      841 cgggccgtcc cctgtgccgt gccactcggc catccgggac gccacttcag gcaggcgcgc
      901 caggtcgtga tgcaccgcga gctggtagac cggcacccgc gaggcgactc gggctgcccg
      961 ccggagcagg accggcgctt cggccggacc aagcatctcg ctgatcttgc cctgaccaac
     1021 catggcggcg gctgcgagtg gctgcatcac cggccggcgc cccaccgccc gcccggcttc
     1081 gatcgactcg gccgatgcga gcaggtagac cgcggcgaga ggcagagtct cctcctgaag
     1141 ctggccggcg gcaagatccg agatgatcag cttgccatct acccggtgct cccccaccgc
     1201 atcgcccagc aggcgcgaca ccgaatcggg gaacagccgc atgctgtgaa tgccgggacg
     1261 gaccagcggc cgctcgctct ctggatcgag gaccgcgatg gtgtcgtcgg agaccagccg
     1321 ggcgcctgcc atggtgagcg ccagggccag ggtggattta ccgctgtgct tgggcgcgag
     1381 gaagacgacg gcgccggcag gataggccac cgcgctcccg tggagcacca gcgcgccctc
     1441 gaagtgcatc gaggtcgaga gcacccggcc cagca
//
LOCUS       DATIFF010000762         4685 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1634111, whole genome shotgun sequence.
ACCESSION   DATIFF010000762 DATIFF010000000
VERSION     DATIFF010000762.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4685
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1634111"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..428)
                     /locus_tag="VLD58_11085"
     CDS             complement(<1..428)
                     /locus_tag="VLD58_11085"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HSB54895.1"
                     /translation="MPHLILASASPRRRQLLEMLGLEITVQPSHIPEVRHPAETPIAY
                     AERLAREKAASIPGDLVLGADTTVLLDDELLEKPADQADALRMLKLLQGRSHSVITSV
                     ALRAHGVVRQATDVTAVTFRPCTDRFLRDYIATGEPMDKAG"
     gene            complement(431..886)
                     /gene="dtd"
                     /locus_tag="VLD58_11090"
     CDS             complement(431..886)
                     /gene="dtd"
                     /locus_tag="VLD58_11090"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: protein motif:HMM:TIGR00256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HSB54896.1"
                     /translation="MRVVLQRVTEASVTIEGRVAGAIERGFCLLVGFTHSDTAAEVDW
                     MAEKVTGLRLFSDAEGKMNLGLAEVGGGLLVVSQFTLYGDAAKGRRPSFIDAARPEVA
                     IPLYERFLAGLRSRGLTVAAGEFGADMLVKIHNDGPVTLILDRDAATRS"
     gene            1039..2823
                     /locus_tag="VLD58_11095"
     CDS             1039..2823
                     /locus_tag="VLD58_11095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54897.1"
                     /translation="MSRGRWIIVLAGALLAVGAGLWLLDRTIEGVLLTQIDAYLRART
                     LALMHSEEGNALAVELPSLDLSLVRRRLVLRNVRIKYLLNQAQRTQEFDGAAPTITIT
                     GVDLSDAIWHRSLRLNGVTIDDAVLRHVDGAPPDSATQPRADADTLPLTLPAADSLLY
                     GVVENWLPEAVRGGRIGTVRVNNATISSTQVRGQLVTVDSSSRLSLTMRGLQLDSARH
                     RIFERANLTLGVFVHAGPDGEDSLLVRAAEVTVTPDDTAFSITEMRTGPMAGRHSLDV
                     HGIRRSHARRMLTIDSLHYAPTTPDSTFFRTAPPRSTRIRLETTDIKVLGLKQENIRR
                     RRVTAGAAWITYANLDVLADRRGPGATKRRGPGPSRRQLLWPARLAALNWVIGTDSAL
                     IDSATIRYAEWLHGETRPASVLFDQMRIRLLRATNDSTVPDSQPLVLEGRGRLLGEAP
                     FSATLRVHVSDGPLRMRMDGEVGPMALERVNSWSLPGSGIEVTGGQLDSSRFWFETAR
                     GRSRGRFRAQWHDLDLRMVDPVTGKQSLGQKLKSIVARTISRNDNMPDDDGKLAGARI
                     DYEVRPTDTFWGLVWRSLRSGLMRTVKG"
     gene            complement(3069..>4685)
                     /gene="glmS"
                     /locus_tag="VLD58_11100"
     CDS             complement(3069..>4685)
                     /gene="glmS"
                     /locus_tag="VLD58_11100"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HSB54898.1"
                     /translation="HTRWATHGPPTSTNAHPHTDQSGKIALIHNGIIENSRAIRKVLE
                     QRGHTFKSDTDTEVLAHLVGECYNGNLEEAVAQALREVEGAYGIAVICADEPDVLVAA
                     RKGSPLLVGVGDGEWFVASDASAILSQTRSVVYLDDGEMVVLTRNGYHVRDLAATRIE
                     KPVAQIEWDLATIERGGYDHFMLKEIFEQPDTVRNTMRGHLLEEEGTARVSGLNLTDD
                     DIKQINRIVITACGTSWHSALIGEYMLEELARIPVEVEYASEFRYRNPVVDDRTLVIA
                     ISQSGETADTLAAVREAKRRGARTLGVVNSVGSTIAREVDGGIYLHAGPEVGVASTKA
                     FTSQVIALALITLRFGRLRHLSILQGRQIITALRALPGQVQQILDRAHEVEALAEQFW
                     RANNALYLGRGVNFPVALEGALKLKEISYIHAEGYPAAEMKHGPIALIDENMPVVFIA
                     PKDGTHGKIVSNVEEVRARGGQVIAISTDGDDQLSRLATATFTIPETLDLLTPILTVI
                     PLQLFSYYVAVRRGCNVDQPRNLAKSVTVE"
BASE COUNT          750 a         1608 c         1576 g          751 t
ORIGIN      
        1 cctgccttgt ccatcggctc accggtggcg atgtagtcgc gaagaaaccg atcggtacag
       61 ggccggaagg tgaccgcggt gacatcggtc gcctgccgca ccaccccgtg agcccggagc
      121 gcgaccgagg tgatcaccga atggctgcgg ccctggagga gcttgagcat gcggagtgcg
      181 tcggcctgat cggcaggctt ctcgagcagc tcgtcgtcga gcagcacggt ggtgtcggcg
      241 ccgaggacca ggtcgccggg aatggaggcg gccttctccc gcgccagccg ctcggcatat
      301 gcgatcggcg tctcggcggg gtgccgcacc tcgggaatgt gcgagggttg caccgtaatc
      361 tcgaggccca gcatttccag cagctgtcgc cggcgtggcg aggccgaggc cagaatgaga
      421 tgcggcacac tcatgatctg gtggccgcgt cgcgatcgag gatcagggtg accggcccgt
      481 cgttgtggat cttcaccagc atgtcggcgc cgaactcccc ggctgccacc gtcagacccc
      541 gggacctgag ccccgccagg aagcgttcat aaagcgggat agccacctcg gggcgcgccg
      601 cgtcgatgaa cgaggggcgg cgccccttgg cggcgtcgcc gtagagcgtg aactgcgaga
      661 ccaccagcag cccgcccccg acctccgcca gtcccaggtt catcttcccc tcggcgtcgg
      721 aaaagagccg gagcccggtc accttctccg ccatccagtc gacctccgcc gccgtgtcgc
      781 tgtgggtgaa tcccaccagc agacagaagc cgcgctcgat ggcgccggcc acccgccctt
      841 cgatcgtgac cgacgcctcg gtcacccgtt gaagcaccac ccgcatgctg acgctccggt
      901 tgtttctatc cctcgggggc gagggtcctg tgcgatgcga caaagaaacc ggatgcggat
      961 tgatccacaa taggcgtgaa gctgccgaaa gggacccaga tcacggaccc gggtttccac
     1021 cgccgggtag atacctgcat gtcacgggga cgctggatca tcgtgctggc gggggcgctg
     1081 ctcgccgtgg gggccggtct atggcttctc gaccggacta tcgaaggcgt cctgctcacc
     1141 cagatcgacg cctacctccg cgcccgtacc ctggcgttga tgcactcgga ggagggaaac
     1201 gccctcgcgg ttgagctccc gtcactcgac ctgagcctgg tccgccggcg gctggtgctc
     1261 cgcaatgtgc ggatcaagta cctgctcaac caggcacaga ggacccagga gttcgatggc
     1321 gccgcgccga cgatcacgat caccggcgtg gatctgagcg acgccatctg gcaccggagc
     1381 ctccggctca acggcgtcac catcgacgat gcggtgctgc gtcatgtcga cggcgctcca
     1441 cccgactcgg cgacccagcc ccgggccgac gccgacaccc ttccgctcac gctccccgcg
     1501 gccgattcgc tgctctacgg cgtggtcgag aactggctcc ccgaagcggt gcgcggcgga
     1561 cgcatcggca ccgtgcgggt gaacaacgcc accatcagct ccacccaggt gcgggggcag
     1621 ctcgtcacgg tcgactcgag ttcgcgcctg agcctcacga tgcgcgggct ccagctcgac
     1681 agcgcccgcc atcgcatctt cgagcgggcc aatctcaccc tcggcgtatt cgtgcacgcc
     1741 ggtcccgacg gtgaagacag cctgctggtc cgcgcggccg aggtcaccgt tactcccgac
     1801 gacaccgcgt tcagcatcac ggagatgcgg accggcccga tggcaggcag gcactcgctg
     1861 gacgtgcatg ggatccggcg gtcgcacgcg cggcggatgc tgacgatcga cagcctgcac
     1921 tacgcgccca cgacaccgga ctcgaccttc ttccggactg cgccgccgcg gagcacccgg
     1981 atccggctcg agaccaccga tatcaaggtc ctcggcctca agcaggagaa cattcgacgc
     2041 cggcgggtca ccgcgggagc cgcatggatc acatatgcca atctcgacgt gctggctgac
     2101 cgccgggggc cgggggctac caaacgccgg gggccggggc cctccaggcg ccagttgcta
     2161 tggcccgccc gactcgccgc gctcaactgg gtgatcggca ctgactctgc cctgatcgac
     2221 tccgccacca tccgttacgc cgagtggctc catggggaga ccaggccggc gtcggtgctg
     2281 ttcgaccaga tgcgcatccg gctcctccgc gccaccaatg acagcaccgt gcccgacagc
     2341 cagccgctgg tgctcgaggg ccgcggccgc ctgctgggcg aggcgccctt ctccgccacg
     2401 ctccgggttc acgtgagcga cgggcccttg cggatgcgga tggacggtga agtgggcccc
     2461 atggcactcg agcgggtcaa ctcctggtcg ctacccggca gcggcatcga ggtcaccggc
     2521 gggcagctcg acagcagccg gttctggttc gagaccgcga ggggacgctc tcgggggcgg
     2581 ttccgggcgc aatggcacga tctcgacctc cggatggtcg acccggtcac cggcaagcag
     2641 agtctggggc agaagctcaa gagtatcgtc gcgcgcacca tctcgcggaa cgacaatatg
     2701 ccagacgacg atggaaagct cgcgggggcg aggatcgact atgaggtacg accaaccgac
     2761 accttctggg gactggtgtg gcggagtctc cggtcggggt tgatgcggac ggtgaagggg
     2821 taggcggctt ggggcttggg gcagatggag gccggaggca ggaggcggga ggccaggagg
     2881 ctgcgacacc acggctgcgc gaggatcgag gatgcgggtg ctggaccgcg tagcgtcccc
     2941 gccgagcgcg gtggagccga agggccagca ctcgccccga ggccggagcg cacaacgggt
     3001 gagttccgca aggaacccac ccgtagtcgt tgagcctgac cgctttgccg ctttgccgcc
     3061 ttgccgcctt actccaccgt caccgacttc gccaggttcc gcggctgatc cacgttgcac
     3121 ccgcggcgca ccgccacgta gtagctgaac agctgcagtg gaatcaccgt caggatcggg
     3181 gtcagcaggt cgagcgtctc gggaatcgtg aacgtcgcgg tcgcgagccg gctgagctgg
     3241 tcgtcaccat cggtgctgat cgcgatcacc tggccgcccc gggcccgcac ctcttccacg
     3301 ttcgacacga tcttgccgtg ggtgccgtcc ttcggcgcga tgaacaccac cggcatgttc
     3361 tcgtcgatca gcgcgatcgg cccgtgcttc atttccgccg cgggataacc ctcggcatgg
     3421 atgtaggaaa tttccttgag cttgagcgcg ccttcgaggg ccaccgggaa gttcaccccg
     3481 cggccgaggt agagggcatt gttcgcccgc cagaactgct cggccagggc ctcgacctcg
     3541 tgggcccggt cgagaatctg ctgcacctgg cccggcaggg cccggagcgc agtgatgatc
     3601 tgccggccct ggaggatact caggtggcgg agccgcccga accggagggt gatcagcgcc
     3661 agcgcgatca cctggctggt gaacgccttg gtgctcgcca cgccgacttc cggccccgcg
     3721 tgcaggtaga tgccgccatc gacttcgcgg gcgatggtcg agcccaccga gttgaccacc
     3781 ccgagagtgc gggccccgcg ccgcttggcc tcgcggaccg cggccagggt gtcggccgtc
     3841 tcacccgact gcgagatggc gatgaccagg gtgcggtcgt ccaccaccgg gttccggtaa
     3901 cggaactccg acgcgtactc gacttccacg ggaatgcgcg ccagctcctc cagcatgtac
     3961 tcgccgatca gggccgagtg ccaggaagtg ccgcaggcgg tgatgacgat gcggttgatc
     4021 tgcttgatgt cgtcgtcggt gaggttgagg cccgagaccc gggcggtccc ctcttcctcg
     4081 agcaggtggc cccgcatggt gttgcgcacc gtgtcgggct gctcgaagat ctccttcagc
     4141 atgaagtggt cgtacccgcc ccgctcgatg gtcgccaggt cccactcgat ctgggccacc
     4201 ggcttctcga tccgggtcgc ggccaggtcg cgcacgtgat acccgttccg ggtcagcacc
     4261 accatctccc cgtcatccag gtacaccacc gaccgggtct gcgagagaat ggcggaggcg
     4321 tccgacgcca cgaaccactc gccgtcgccc acgcccacga ggagaggcga ccccttgcgg
     4381 gccgcgacca gcacgtcggg ctcgtcggca cagatcaccg cgatgccata ggcgccctcg
     4441 acttcgcgga gcgcctgggc caccgcttcc tcgaggttgc cgttgtagca ctcgcccacg
     4501 aggtgggcca gcacttcggt atcggtatcg gacttgaagg tatggccccg ctgctccaga
     4561 accttccgga tggcgcgcga gttctcgatg atcccgttgt ggatcagcgc gatcttcccc
     4621 gactggtcgg tgtggggatg cgcgttggtg ctcgtcggcg ggccatgcgt cgcccagcgg
     4681 gtgtg
//
LOCUS       DATIFF010000763         1850 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2097214, whole genome shotgun sequence.
ACCESSION   DATIFF010000763 DATIFF010000000
VERSION     DATIFF010000763.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1850
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2097214"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..495)
                     /locus_tag="VLD58_11105"
     CDS             complement(<1..495)
                     /locus_tag="VLD58_11105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54899.1"
                     /translation="MQKHQHSESQLGLLTAPPDRPTASRGLPVLDDAHQRGTTFHEVP
                     VKAILNSPATTGMGFWSLNPYVGCEFGCTYCYARETHKWVVEKAAERQGGMADSAFAP
                     GQHSSSEAEYDAESLTALPRPSALGSPQGDPARGSPSGPDHPVPFDLTLEGPERTVLL
                     SGPNT"
     gene            complement(579..1067)
                     /locus_tag="VLD58_11110"
     CDS             complement(579..1067)
                     /locus_tag="VLD58_11110"
                     /inference="COORDINATES: protein motif:HMM:NF016840.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HSB54900.1"
                     /translation="MDPRLIIPLDILRLNTRLYRNCLTGLSDEQAQKRANGRGETNSA
                     AFIAAHLVDSRYYLLNLLGRKVPSPLKGCEGGFMRIDKVIGYPPLSEIQAAWTAVGEL
                     IERQLETMSPAALDAKFEDFPMPIPTVLGALSFMTQHECYHLGQLGLLRKHAGFEAMA
                     YS"
     gene            complement(1129..>1850)
                     /locus_tag="VLD58_11115"
     CDS             complement(1129..>1850)
                     /locus_tag="VLD58_11115"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HSB54901.1"
                     /translation="SLGFEALTTTSAGLAFTLGRRDGANLISRDETLENARVISEATD
                     LPVAADLENGFGDAPEDAALTIRLAAERAGLVGGSIEDATGNAARPIYDFQHAVERIA
                     AAVEAARALPFRFMLVARAENFLHGRPDLDDTIRRLQAFEAAGADVLYAPGLTRAEEI
                     RAVCQSVKRPVNVVMGLKAGSFPVAELAAMGVKRISLGSALSRAALGGFIQAAREIRE
                     KGTFDFAKSAISYAEVNGFMV"
BASE COUNT          280 a          588 c          653 g          329 t
ORIGIN      
        1 ggtgttgggg ccggagagca gcacggtgcg ctcggggcct tcgagggtca ggtcgaaggg
       61 aaccgggtgg tcaggccctg aaggactccc tcgcgccggg tcgccctgcg ggctcccaag
      121 ggcgctcggt cgcggcaaag cggtcagtga ttccgcgtca tactccgctt cgctcgagga
      181 atgctgtccc ggcgcgaagg cactgtccgc catgccgcct tgccgctctg ccgccttttc
      241 tactacccac ttgtgcgtct cccgcgcgta gcagtaggtg cagccgaatt cgcagccgac
      301 gtaggggttg agcgaccaga accccatccc ggtggtggcg ggagaattga gaatcgcctt
      361 gaccggcact tcatggaacg tggtgccgcg ctggtgcgcg tcgtccagca ccggcagacc
      421 ccgtgaagcg gtcgggcggt cgggcggggc ggtcaggagg ccgagctgcg attcactatg
      481 ttgatgcttc tgcatatccc atctcatcgt actgttcgtg tactcggaac cactgaccgc
      541 tttgccgcct ggccgcttgg ccgcttggcc gcctgccctc agctgtatgc catcgcctcg
      601 aaccccgcgt gcttgcggag caggcccaac tggccgaggt gatagcactc gtgctgggtc
      661 atgaaggaca gggcgccgag caccgtcggg atcggcatcg ggaagtcctc gaacttcgca
      721 tccagcgccg ccgggctcat ggtctccagc tgccgttcga tcagttcgcc caccgcggtc
      781 cacgccgcct ggatttcgga gagcggcgga tagccgatga ccttgtcgat cctcatgaaa
      841 ccaccctcgc accccttgag cgggctcggc accttccggc cgaggaggtt gagcaggtag
      901 tagcgcgagt cgaccaggtg ggccgcgatg aaggcggcgg agttggtctc gccccggccg
      961 ttggcgcgct tctgggcctg ctcatcggag aggccggtga ggcagttgcg atagagccgg
     1021 gtgttgagcc ggaggatatc gagcgggatg atcagtctgg ggtccatggt tgcgtcctga
     1081 gttcgatggt cgattgcgat cttcgtttcg cctacccgcc tagccgcttt acaccatgaa
     1141 tccattcacc tcggcatacg aaatcgcgga cttcgcgaag tcgaaggtgc ccttctcccg
     1201 gatctcacgg gcggcctgga tgaatccacc gagggcggcc cggctcagcg ccgagccaag
     1261 gctgatgcgc ttcacaccca tcgcggcgag ttccgccacc gggaaggagc cggccttgag
     1321 acccatcacc acattcaccg gccgcttcac cgactggcac acggcacgga tctcttcggc
     1381 gcgggtgaga ccgggagcgt agagcacgtc ggcgccggcg gcctcgaagg cctggagccg
     1441 gcggatggtg tcgtcgagat cggggcggcc gtgcaggaaa ttctcggccc gggccaccag
     1501 catgaaccgg aagggcaggg cccgggcggc ctcgacggcg gcggcgatgc gttccaccgc
     1561 gtgctggaag tcgtagatcg ggcgggcggc attgccggtg gcgtcttcga tggagccgcc
     1621 caccaggccg gcgcgttcgg cggcgaggcg gatggtcagt gccgcgtctt ccggggcatc
     1681 gccgaatccg ttctcgagat cggcggcgac cgggagatcg gtggcttcac tgatgacgcg
     1741 ggcgttctcc agggtctcgt cgcgcgagat caggttggcg ccgtcgcggc ggccgagggt
     1801 gaacgcgagc cccgcgctgg tggtggtcag cgcttcgaag ccgaggctgg
//
LOCUS       DATIFF010000764         1255 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1634414, whole genome shotgun sequence.
ACCESSION   DATIFF010000764 DATIFF010000000
VERSION     DATIFF010000764.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1634414"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..995)
                     /locus_tag="VLD58_11120"
     CDS             complement(<1..995)
                     /locus_tag="VLD58_11120"
                     /inference="COORDINATES: protein motif:HMM:NF013591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HSB54902.1"
                     /translation="MTLAPIPALTPADLQQITWEELLPLYRELVERPVSAANVESWLA
                     DWSRLEELITEAAALAMIAYTCDTADPAKEAAHLRFSAEILPRVEEQEVQLANRLLDL
                     GYTRPDLEVTIARFRTASEIFREENIPLSQEIEEHSARYQKITGGLTVDWDGVEKTLP
                     ELQPYLQSPDRPVRERAFRLNCAAYSARRDELADIFDTLYDLRIKTARNAGFADFESY
                     AFKAKARFDYTPADCRRFHAACEEVVAPAVERVMARRQAALGVDRLRPWDVGPDPKGR
                     QPLKPFAEVNDLIHTSRRVFGQVSGHFGEQFQVMMNEGLLDLGTRKGKAPGGYCET"
     gene            complement(992..>1255)
                     /locus_tag="VLD58_11125"
     CDS             complement(992..>1255)
                     /locus_tag="VLD58_11125"
                     /inference="COORDINATES: protein motif:HMM:NF021606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2339 domain-containing protein"
                     /protein_id="HSB54903.1"
                     /translation="SVSAWWILFAAGCFVLGFLRAQKPLRYAGFGVAALALGKVLLVD
                     LSTLDAFYRIGSVLILGIVSLGVAYTYHRRAGRAGQARGGKTA"
BASE COUNT          192 a          432 c          434 g          197 t
ORIGIN      
        1 gtctcacagt agccgcccgg tgccttgccc ttccgggtgc cgaggtcgag gagcccctcg
       61 ttcatcatga cctggaactg ctcgccgaag tggcccgaca cctggccgaa cacccggcgc
      121 gaggtatgga tcaggtcgtt cacctcggcg aagggcttga gcggctggcg gcccttgggg
      181 tcgggtccta catcccaggg ccggagccgg tcgacgccga gcgccgcctg ccggcgggcc
      241 atgacccgct cgaccgcggg cgccaccact tcttcacagg cggcgtggaa gcggcggcag
      301 tccgccgggg tgtagtcgaa ccgcgccttg gccttgaagg cgtacgactc gaaatcggcg
      361 aagcccgcgt tcctggcggt cttgatccgg aggtcgtaga gcgtgtcgaa gatgtccgcc
      421 agctcgtcgc gccgggccga ataggcggcg cagttgaggc ggaaggcccg ctcccgcacc
      481 gggcggtcgg gactctggag atagggctgc agctcgggga gagtcttctc gaccccatcc
      541 cagtcgaccg tgagcccgcc ggtgatcttc tggtagcggg cgctgtgctc ctcgatctcc
      601 tgcgagaggg gaatgttctc ctcccggaag atctcgctgg cggtgcggaa ccgcgcgatc
      661 gtgacctcga ggtccggccg ggtgtagccc aggtcgagca gccggttcgc gagctgcacc
      721 tcctgctcct ccacccgcgg caggatctcg gccgagaagc ggaggtgcgc cgcttccttg
      781 gcgggatcgg cggtatcgca ggtgtacgcg atcatcgcca gcgcggccgc ctcggtgatc
      841 agctcttcca gccgggacca gtcggccagc cagctctcga cattggccgc cgagaccggc
      901 cgctccacca gttcccggta gaggggcagc agctcctccc aggtgatctg ctgaaggtcg
      961 gccggggtca gtgcgggtat cggtgccagg gtcacgccgt cttgcctccg cgtgcctgtc
     1021 ccgccctgcc ggcccgccga tgataggtgt acgctacgcc cagcgatacg atgcccagga
     1081 tcagcaccga gccgatgcgg tagaaagcgt cgagcgtcga gaggtcgacc agcaggacct
     1141 tccccagtgc cagggccgcc accccgaacc cggcgtagcg cagcggtttc tgcgcccgca
     1201 ggaagcccag gacgaagcac ccggccgcaa acaggatcca ccaggcgctg accga
//
LOCUS       DATIFF010000765         2757 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1175321, whole genome shotgun sequence.
ACCESSION   DATIFF010000765 DATIFF010000000
VERSION     DATIFF010000765.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2757
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1175321"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            150..2189
                     /locus_tag="VLD58_11130"
     CDS             150..2189
                     /locus_tag="VLD58_11130"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB54904.1"
                     /translation="MFCKRCGSEVDKATQFCPTCGLDLRVTSPVQAIATGDVSELDIV
                     REALAEEYELLEELGRGGMAIVYRARDRHLEREVAIKVLPFSLAFDAEFVERFTREAR
                     TAAQLEHPNIISIYRVGKTGRVIYFVMKYVRGGSLSKIMAERKKLNPPEIRKLLMEVG
                     SALGYAHTRGIVHRDIKPDNIMFDEFGACVVTDFGIAKAGTSSRLTGTGMSIGTPHYM
                     SPEQARAQAIDGRSDLYSLGVVAYQALVGEVPYDGEDSFAIGYKHIMEPIPVPLLDTS
                     DERRLFEVIKRLIQKDPLDRFQKAEDLLKVLEGQPSAMVSPRRVTQSQQVMAVQSTTP
                     LPAVPGRHSTANPPPPGAGRPSTAAAPPFPSSVGPDTPRRPVMRRTAAAPDPNAGRWV
                     PWVLAVVLILVFILGGISLYRRGALGPGRPAAPADSVPDTSATVSSQVTDSTALLDST
                     LLAPALQSFDSTAPAQPRPRPPAPVTHQADVPGDTGTGILRFGNLPPRSQVFVDSRPV
                     TQPGADIRVGAGWHEVGVSAPGYSFYTDSVHVESGRTLMLTPSLSTSDLPAVAPGSRE
                     DLRRRALARMDCENPSPINRFGRECYDTPPQPLASTRVPVPAGVQGTPTPVTMIVKVS
                     FRGRTLIVRTRNPSNDDAFTKAVESYAETMRWTPAMRDGRPVDGWTQYAFQPEVP"
     gene            2186..2689
                     /locus_tag="VLD58_11135"
     CDS             2186..2689
                     /locus_tag="VLD58_11135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HSB54905.1"
                     /translation="MIRPVVHPTAFIAPSALVMGDVVLEEEASVWYTSVLRGDTAPIR
                     IGSQTCLQDGCIVHVDEGVPCTIGKRVGVGHRVTLHGCTVEDDCLVGMGSILLNNVVV
                     GRGSVIAAGAVLTEGTKVPPGSLVMGLPAKVVRPVDAELTRRIEQTWRHYIDQARRHR
                     AGQFPVG"
BASE COUNT          462 a          930 c          927 g          438 t
ORIGIN      
        1 tagccgttag ccgttagccg gatccagagc cgaccaggtc aggcgggttt accccgcccg
       61 tcccggcctc gatcgggctg acggctagcg gctaacggct tatggccaaa aaacttgact
      121 cccgcacaca acccggcgaa ccttcgctca tgttctgcaa acggtgcgga agtgaggtcg
      181 acaaggccac acagttctgc cccacctgtg gtctcgactt gcgggtcacg tcacccgtcc
      241 aggccattgc gaccggcgat gtcagcgagc tcgacatcgt ccgcgaagcg ctggccgaag
      301 agtacgagct gctggaggag ctcgggcgtg gtggcatggc cattgtctat cgggccaggg
      361 accggcacct cgagcgcgag gtagccatca aggtcctgcc gttctcgctg gcgttcgacg
      421 ccgagttcgt cgagcggttc acccgcgaag cccgcaccgc cgcccagctc gaacatccca
      481 acatcatctc catctaccgg gtcggtaaga ccggccgcgt catctacttc gtcatgaagt
      541 atgtgcgcgg cggctcgctg tccaagatca tggcggagcg gaagaagctg aatccgcccg
      601 agatccggaa actcctgatg gaagtcggca gcgccctggg gtacgcccac acccgcggga
      661 tcgtgcaccg ggacatcaag cccgacaaca tcatgttcga cgagttcggc gcctgcgtcg
      721 ttaccgactt cggcattgcc aaggccggca ccagctcgcg cctcaccggc accgggatgt
      781 cgatcggcac gccgcactac atgagccccg agcaggcccg ggcccaggcc atcgatggcc
      841 gcagcgatct ctacagcctg ggtgtggtgg cctatcaggc gctggtgggc gaggtgccct
      901 acgacggcga agacagcttc gccatcggct acaagcacat catggagccg atcccggttc
      961 cgctgctcga tacttcggat gagcgccggc tcttcgaagt gatcaagcgc ctgatccaga
     1021 aggatccgct cgaccggttc cagaaggcgg aagacctgct caaggtgctc gaaggccagc
     1081 cgagtgcgat ggtctctccc cggcgggtca cccagagcca gcaggtgatg gcggtgcagt
     1141 cgaccacgcc gttgccggcg gtgcctggcc ggcactcgac cgccaatccc ccgccgccgg
     1201 gagccggccg tcccagcacc gccgcggcgc cgccgttccc gtcgtcggtc ggtcccgaca
     1261 cgcccaggcg cccggtgatg cggcggacgg cggccgcgcc cgatccgaat gccggacgct
     1321 gggtgccgtg ggtcctcgcc gtagtgctga tcctggtgtt catcctggga gggatttcgc
     1381 tctaccgccg tggggcgttg ggtcctggaa ggccggccgc cccggccgat tccgttcccg
     1441 acacctcagc gaccgtcagc agccaggtga ccgactcgac cgcgctgctc gatagcaccc
     1501 tcctcgcgcc ggcgctccag agcttcgatt ccaccgcacc ggcgcagccg agacccaggc
     1561 cgccggcgcc ggtcacccat caggccgacg tgcccggtga caccggcacc ggaatcctgc
     1621 gcttcggcaa tctcccgccg cgctcgcagg tgttcgtcga ttcgaggccc gtcacccagc
     1681 cgggcgccga tatccgagtc ggcgccggct ggcacgaggt cggagtctcg gcgccggggt
     1741 attccttcta taccgacagt gttcatgtcg agagcggccg cactctgatg ctgacgccgt
     1801 cgctcagcac ctccgacctg ccagcagtgg cgccgggctc gcgcgaggac ctgcggcgcc
     1861 gggcgctggc gcggatggat tgcgagaatc cctcgccgat caaccggttc ggacgggagt
     1921 gctacgacac gccgccccag ccgctcgcga gcacccgggt gccggttccc gcgggggtgc
     1981 agggcacacc cacaccagtt accatgatcg tgaaagtgtc gttccgcggc cggaccctca
     2041 tcgtccggac ccgcaatcct tccaatgacg atgcgttcac caaggcggtc gagtcctacg
     2101 ccgagaccat gcgctggacc ccggccatgc gtgatggacg gccggtggac gggtggacgc
     2161 agtacgcctt ccagcctgag gtgccgtgat tcgtccagtt gtccatccca ccgcgttcat
     2221 cgcgccgtcc gcactggtca tgggcgacgt ggtcctggag gaagaagcga gcgtctggta
     2281 cacctcggtc ctgcggggtg acaccgcgcc catccggatt ggcagccaga cctgtctcca
     2341 ggatggctgc atcgtgcatg tggacgaagg ggttccctgc accatcggga agcgggtcgg
     2401 agtggggcac cgggtgaccc tgcatgggtg caccgtcgaa gacgactgcc tggtggggat
     2461 ggggagcatt ctcctcaaca acgtggtggt cgggcggggg agtgtcatcg ccgcgggcgc
     2521 cgtgctgacc gaaggcacga aggtgccacc ggggtcgctg gtgatgggat tgccggccaa
     2581 ggtcgtccgg ccggtggatg cggagctgac ccggcggatc gaacagacct ggcgccacta
     2641 tatcgaccaa gctcggcggc atcgggcggg gcagttcccg gtggggtgac ggtacaggcg
     2701 gcaaggcggc aaggcggcaa agcggcagag cggcaaggag aagggagaag gaagaag
//
LOCUS       DATIFF010000766         1078 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1328531, whole genome shotgun sequence.
ACCESSION   DATIFF010000766 DATIFF010000000
VERSION     DATIFF010000766.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1328531"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1078
                     /locus_tag="VLD58_11140"
     CDS             <1..>1078
                     /locus_tag="VLD58_11140"
                     /inference="COORDINATES: protein motif:HMM:NF015980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54906.1"
                     /translation="KLLYDNPKVRPGLVVLPAPGLDSVRAIVERDLDFSDRFEVIAVP
                     FGTPAPSAPINFAPWRAMNAALAVELARAAGGGGVVARLYDVASGAVRQEATVQLETA
                     GVGAGRLGIHALADEIVLWATGAPGVAASRILFVSDNRIWRIDSDGYGPAPITPAGRT
                     AYSPAWSADGRRFAFTEYLEGKWQVVLQTVATGTRLVFPTTATTVNITPAISPDGRRI
                     AFSRVVDRNYALHQANLADLCCVERLTATRFAENLSPTYSPDGRRIAFVTNRAGSPQI
                     YVMSADGTDQELLVPYEYGVSGASFAPDWSPDGNTIAFHREAGGSFQVMVFDLTTERV
                     RQVSSEGRNEDPSWGPDGRHLVFVS"
BASE COUNT          152 a          363 c          378 g          185 t
ORIGIN      
        1 aagctgctct atgacaatcc caaggtccgc cccgggctgg tggtgctgcc ggcgccgggg
       61 ctggattcgg tgcgggccat cgtggagcgg gatctcgatt tcagcgatcg gttcgaggtg
      121 atcgcggttc cgttcggcac cccggcgccg tctgccccga tcaacttcgc tccctggcgc
      181 gcgatgaacg cggcgctggc cgtggagctg gcgcgggcgg ctggtggtgg cggggtcgtg
      241 gcgcgcctct acgatgtcgc cagcggggcg gtgcgccagg aggccacggt gcagctcgag
      301 acggccgggg tgggggcggg gcgcctcggc atccacgcgc tggcggacga gatcgtcctc
      361 tgggccaccg gcgctccggg agtcgccgcc tcccgcattc tcttcgtgtc ggacaaccgg
      421 atctggcgga tcgactcgga tggctacgga ccggcgccga tcacgccggc cggccggacc
      481 gcctactcgc cggcgtggag cgcggacggg cgccggttcg ccttcaccga gtacctcgaa
      541 ggcaagtggc aggtcgtctt gcagacggtt gccaccggga cccggctggt ctttccgacc
      601 acggccacga ccgtgaacat caccccggcc atttcccctg acggacgacg gatcgccttt
      661 tcgcgggtgg tggaccgcaa ctatgccctc catcaggcca atctcgccga tctctgctgc
      721 gtggaacggc ttaccgcgac ccggtttgca gaaaatctat caccaaccta ttctcccgac
      781 ggacgccgga tcgcgttcgt gaccaaccgt gcgggatcgc cgcagatcta cgtgatgtcg
      841 gcagacggca ccgaccagga gctgctggtc ccctacgaat atggggtgtc gggcgcctcg
      901 ttcgcgccgg actggtcacc ggacggcaac acgatcgcct tccaccggga agcgggcggg
      961 tcgttccagg tcatggtgtt cgatctgacg accgagcggg tgcgccaggt gtcctcggag
     1021 gggcggaacg aagatccctc ctggggcccc gacggccgcc acctcgtgtt cgtgtcca
//
LOCUS       DATIFF010000767         2904 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1021803, whole genome shotgun sequence.
ACCESSION   DATIFF010000767 DATIFF010000000
VERSION     DATIFF010000767.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2904
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1021803"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            28..489
                     /locus_tag="VLD58_11145"
     CDS             28..489
                     /locus_tag="VLD58_11145"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HSB54907.1"
                     /translation="MAISAGSAGRSTVKAEPNVIPMIDIMLVLLIIFMIVTPLIAAGF
                     KATMPKGKNLDKRPEGENEVILGVDAGGQYFLNGKGPVDPVVLEEQLKSIYAARTEDK
                     ILYFKADNQLRFARIQDAVELARRSGARVMAAITEPKIQGSLFDAAAEKEN"
     gene            491..919
                     /locus_tag="VLD58_11150"
     CDS             491..919
                     /locus_tag="VLD58_11150"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HSB54908.1"
                     /translation="MAGGSSAAPGDVSSEPNVIPMIDIMLVMLIIFMVSQPLSRMALD
                     IQVPPQETATKSTAASNQIVLELTEDGGYAINTQPVPKDQLDTQIHAIFDTRPAKLLF
                     IKSAGGRTYQDVIDAMDVARGAGVQVIGFTPAPSPGQQAQ"
     gene            1128..1841
                     /locus_tag="VLD58_11155"
     CDS             1128..1841
                     /locus_tag="VLD58_11155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54909.1"
                     /translation="MVSVILHLLIGALLLFRIEADFARVLDAGRKDGGPRGGGGGGAG
                     RVAYITLPAPAASAPKAVAVEPPKEAPQPVPVTPTPTPPPVVPPPVEQQPVAVTTPTP
                     AAAPATGDTIAGRGPGLGGGEGGGTGGGAGPGTGPGRGPGVGTGGGEGGTGKSPRPRY
                     ELLPPTDAPKEFRGMEIKATFAIDVDGKVRKVTFDPQLPKGKYASLLKETMEGYRFHP
                     ALGPDGAPVPGTFEYTLLF"
     gene            1882..>2904
                     /locus_tag="VLD58_11160"
     CDS             1882..>2904
                     /locus_tag="VLD58_11160"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HSB54910.1"
                     /translation="MPGIFVRKSIADCENDIAERGGLRRSLNKWHLTALGVGATIGAG
                     IFATTGTAIAGDPARPGAGPAIIFSFVLTAVACGFAALCYAEFAAMVPISGSAYTYAY
                     ASLGEFVAWIIGWDLIVEYAVGNIGVAIGWSGYFRELLSHFGLDLPAWLATDFRSAHD
                     AAAAVAAGATDVTNTYLASAISSAPHLFGIPIIANLPAFLVVALITVILVIGIKESAN
                     SNNAMVLLKIGIILFFLAVGAFFIKGENWNNPATGGFAPNGFAGISAAAAIIFFSYIG
                     FDAVSTAAEEAENPGRDMPFGIIMSLAITTVLYIALSIVMTGLAPWQQLGTPEPMITA
                     LQYADGP"
BASE COUNT          476 a         1011 c          941 g          476 t
ORIGIN      
        1 tccaggccca gaaggcggta actggtcatg gccatatcgg cgggtagcgc tggccgcagc
       61 accgtcaaag ctgagccgaa cgtcattccg atgatcgaca tcatgctggt gctgctcatc
      121 atcttcatga tcgtgacgcc gctgatcgcc gccggcttca aggcgacgat gcccaagggg
      181 aagaacctgg acaagcggcc cgagggcgag aacgaggtca tcctgggcgt ggacgccggc
      241 gggcagtact tcctcaacgg caaaggcccg gtggatccgg tggtgctgga ggaacaactg
      301 aagtcgatct acgccgcgcg gaccgaggac aagatcctgt acttcaaggc ggacaatcag
      361 ctccggttcg cccggatcca ggacgcggtg gaactggccc ggcgctccgg cgcccgggtg
      421 atggcggcga tcacggagcc caagatccag ggcagcctgt tcgacgccgc cgccgagaag
      481 gagaactgac atggccggcg gatcctccgc ggcgccgggc gacgtctcgt ccgagccgaa
      541 cgtgattccg atgatcgaca tcatgctggt gatgctgatc atcttcatgg tgtcgcagcc
      601 gctttcgcgg atggccctgg acatccaggt gccgccccag gaaacggcca ccaagtccac
      661 cgcggcctcg aaccagatcg tgctggagct gaccgaggac ggtgggtatg ccatcaacac
      721 ccagccagtg ccgaaggatc agctcgacac ccagatccac gcgatcttcg acacccgccc
      781 ggccaagctg ctgttcatca agtcggccgg cggccgcacc taccaggacg tgatcgacgc
      841 gatggacgtc gcgcgcggtg cgggagtgca ggtgatcggg ttcaccccgg ccccgtcgcc
      901 gggtcagcag gcccagtagc cgcggcggtt ccgcgggcag gcaatactcc ggggggtcgt
      961 caccagacgg ccccccggtc gtatgtttga acgggtgaat ggtgtgtatc gggcggcggt
     1021 ccgcgtcccc accatcgagt cccgcgcacg ttccgaggag ggaagccctg cggtcccgct
     1081 acgatttcgc cttcgccagg gcctcacgcc ggtcacccac cggcgcgatg gtctcggtca
     1141 tcctgcacct cctgatcggc gcgctcctgc ttttccggat cgaggccgat tttgcgcggg
     1201 tactcgatgc ggggcggaag gacggcgggc cacggggcgg cggcggtggc ggggccggtc
     1261 gcgtggcgta tattacgctt cccgcaccgg ccgccagtgc acccaaggcc gtcgcagtcg
     1321 aaccacccaa ggaagcgccc caaccggtgc cggttacgcc gacacccacc ccaccgccgg
     1381 tggttccccc gccggtggaa cagcagccgg tcgcggtcac tacgcccacc ccggccgctg
     1441 ctcctgccac gggtgatacc attgcgggac gcggtccggg cctgggcggc ggggaaggtg
     1501 gcgggaccgg cggcggggcc gggccgggga ccggaccggg acgtggtccc ggggtgggca
     1561 ccggcggtgg cgaagggggc accgggaagt cgccgcggcc gcgctacgag ctcctgccgc
     1621 ctaccgatgc gcccaaggaa ttccggggga tggagatcaa ggcgaccttc gccatcgatg
     1681 tcgacggcaa ggtgcgcaag gtgaccttcg acccccagct ccccaagggc aagtacgcct
     1741 cgctgctcaa ggaaacgatg gaagggtacc gcttccatcc tgcgctgggc cccgacggtg
     1801 ctcccgtgcc gggcaccttc gaatacacgc tgttgttctg acccgacgtt ccgaaccgac
     1861 gtcttctctc tccaagacaa catgcctgga attttcgtcc ggaagtcgat cgccgactgc
     1921 gaaaacgaca ttgccgagcg cggcggtctc agacgctcgc tcaacaagtg gcacctcacc
     1981 gcgctgggcg tcggcgccac catcggcgcc gggatcttcg ccaccaccgg caccgccatc
     2041 gccggcgatc ccgcccggcc cggcgccggc cccgccatca tcttctcctt cgtcctcacg
     2101 gcggtggcct gcggcttcgc ggcgctctgc tatgccgagt tcgcggcgat ggtgccgatc
     2161 tccgggtcgg cctacaccta cgcctacgcc tcgctcggcg agttcgtggc ctggatcatc
     2221 ggctgggacc tgatcgtcga gtacgcggtg gggaacatcg gcgtggccat cggatggtcg
     2281 ggctatttca gggagctatt gagtcacttc gggctggacc tgcctgcctg gctcgcgacc
     2341 gatttccgaa gtgcccatga tgccgcggcc gcggtcgcgg ccggcgccac cgacgtcacc
     2401 aacacctatc tcgcctccgc catcagcagc gctccccatc tcttcggtat cccgatcatc
     2461 gccaacctcc ccgcctttct ggtggtggcg ctgatcacgg tgatcctggt gatcggcatc
     2521 aaggagtcgg ccaactcgaa caacgcgatg gtgctgctca agatcggcat catcctgttc
     2581 ttcctcgcgg tgggcgcctt cttcatcaag ggcgagaact ggaacaaccc ggccaccggc
     2641 ggcttcgcac ccaacggctt cgccggcatc agcgccgccg cggcgatcat cttcttcagc
     2701 tacatcggat tcgatgccgt ctccaccgcc gcggaggagg ccgagaatcc cggccgcgac
     2761 atgccgttcg gcatcatcat gagcctggcg atcaccacgg tgctgtacat cgcgctctcc
     2821 atcgtgatga cgggcctcgc cccctggcag cagctcggca ctcccgagcc catgatcacg
     2881 gcgctccagt atgccgacgg cccc
//
LOCUS       DATIFF010000768         1763 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_98168, whole genome shotgun sequence.
ACCESSION   DATIFF010000768 DATIFF010000000
VERSION     DATIFF010000768.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1763)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1763)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1763
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98168"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..603
                     /locus_tag="VLD58_11165"
     CDS             <1..603
                     /locus_tag="VLD58_11165"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSB54911.1"
                     /translation="LSVALAERFGRVIATDASEHQLAQATAHPRVEYRRANAEAAGIP
                     AATVDLATAAQAVHWFDRPAYYQEVRRVCRPGALIALVTYNLFRITPELDRIIDHFYW
                     QTIWQYWPPERRLVEAGYRTLDFPFAELPTPPLEMQAEWTLPHVLGFVGTWSALRGLE
                     RDRGGRVVEEFARELSGAWGPAETRRPVRWELAVRLGRVS"
     gene            671..889
                     /locus_tag="VLD58_11170"
     CDS             671..889
                     /locus_tag="VLD58_11170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54912.1"
                     /translation="MQKLVTWAVQVGIAIALAMGATLARGRGTSLLLAGMAGGAAIAS
                     VLSLWMRPPEALARPQRDGATSISTFEG"
     gene            complement(847..>1763)
                     /locus_tag="VLD58_11175"
     CDS             complement(847..>1763)
                     /locus_tag="VLD58_11175"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HSB54913.1"
                     /translation="FLVMGPWYHGQWFADSGIALGNIRFDRSTGADFRALQTRWFAYW
                     LKGQGDGKFAEATVFDAGTNEWRTFDHWPPAGVAHRRLYFQADGGLSFRAPSAATGWD
                     QYVSDPARPVPYRPRPVERTYSPTSRWRRWETEDQRFVDGRTDVLTWQTAPLTADVTV
                     AGNVVAHLFASTTGSDADWVVKLIDVYPDTLPDRPTMGGYELMVTGEIMRGRYRMGWD
                     HPTKIPPSAVTPFTVDLHQQSYTFRKGHRIMVQVQSTWFPLYDRNPQTFVPNIFTARA
                     EDYRAQIHRVYRTARYPSNVEIDVAPSR"
BASE COUNT          259 a          574 c          642 g          288 t
ORIGIN      
        1 ctgtcggtgg cattggcgga gcgcttcggt cgggtgatcg ccaccgacgc cagtgagcac
       61 cagctggcgc aggcgaccgc ccatccacgg gtggagtatc gccgggcgaa tgcggaggcg
      121 gccgggattc ccgccgccac cgtggatctc gcgacggcgg cgcaggcggt gcactggttc
      181 gaccgcccgg cctactatca ggaggtgcgc cgggtgtgcc ggcccggcgc cctgattgcg
      241 ctcgtgacct acaatctgtt ccggatcacc cccgagctgg accggatcat cgatcacttc
      301 tactggcaaa cgatctggca gtactggccg ccggaaaggc ggctcgtcga agccggctac
      361 cgcacgctcg acttcccgtt cgccgagctg cccacgccgc cgctcgagat gcaggcggag
      421 tggactctgc cgcatgtgct gggattcgtg ggtacgtggt cggcgctgcg ggggctggag
      481 cgcgatcggg gcggccgtgt ggtcgaggag tttgcccgtg aattgtcagg cgcctgggga
      541 ccggccgaaa cgcggcgccc ggtgcgctgg gagctcgcgg tccggctggg acgcgtttcc
      601 tgacgaaccg ccgggaacct tccggtcgcc tcgggcgatt ctggagtgac accagaatcg
      661 gagtgggacg gtgcagaagc tcgtgacctg ggcggtgcag gtggggatcg cgatcgccct
      721 ggcgatgggc gcaacactcg ccagggggcg tgggacttcg ctgctgctcg ccggcatggc
      781 gggcggggcg gcgatcgcca gcgtactcag tttgtggatg cggccgcccg aggcgctcgc
      841 gcgccctcag cgggacggcg ccacgtcgat ctccacgttc gagggatagc gcgcggtccg
      901 gtacacccgg tggatctgcg cccggtaatc ttccgcccgg gcggtgaaga tgttcgggac
      961 gaaggtctgc ggattccggt cgtagagcgg aaaccaggtg ctctgcacct ggaccatgat
     1021 ccggtgtccc ttgcggaagg tgtaggactg ctggtgcagg tccaccgtga acggcgtcac
     1081 cgcgctcggt gggatcttcg tggggtgatc ccaccccatc cgatagcgtc cccgcatgat
     1141 ctcccccgtc accatcagct cgtacccccc catggtgggc cggtcgggga gggtgtcggg
     1201 atacacgtcg atgagcttca ccacccagtc ggcgtccgag cccgtggtcg aggcgaacag
     1261 gtgggcgacg acgttgcccg cgacggtgac gtccgcggtg agcggggcag tctgccaggt
     1321 gagcacgtcg gtccggccgt ccacgaagcg ctggtcctcg gtctcccagc gccgccagcg
     1381 cgaggtgggt gagtaggtcc gctccaccgg acgcgggcgg tagggcaccg ggcgggccgg
     1441 gtccgacacg tactgatccc agccggtcgc ggcgctcggc gcccggaagg agagcccgcc
     1501 gtctgcctgg aaatacaggc gtcggtgcgc gaccccggcg gggggccagt gatcgaacgt
     1561 ccgccattca ttcgtgccgg cgtcgaacac cgtcgcttcg gcgaactttc catcaccctg
     1621 tcccttcagc cagtaggcga accagcgagt ctgcagtgcg cggaagtccg cccccgtgga
     1681 ccggtcgaag cggatgttgc cgagcgcgat cccggaatcc gcgaaccact gtccgtggta
     1741 ccacggtccc atcacgagaa aat
//
LOCUS       DATIFF010000769         2674 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2098432, whole genome shotgun sequence.
ACCESSION   DATIFF010000769 DATIFF010000000
VERSION     DATIFF010000769.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2674
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2098432"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2501)
                     /gene="secA"
                     /locus_tag="VLD58_11180"
     CDS             complement(<1..2501)
                     /gene="secA"
                     /locus_tag="VLD58_11180"
                     /inference="COORDINATES: protein motif:HMM:TIGR00963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HSB54914.1"
                     /translation="MIKSLMTAVFGTRFDRDRKRIQPIVDAIHRHEERLKDLSEEELK
                     AQTGAFRARLAERTGAVKAELEEVRAAKHGCADPAERDQLEQRFHQLEAQWKKELAAG
                     LDDLLPEAYATVREACRRLLGTTVMVTGRELVWDMVPYDVQLIGGVVLHSGKIAEMAT
                     GEGKTLVATLPLYLNALTGRGAHLVTVNNYLARRDSQWMGHVFTYLGLTVACLDDTEP
                     SSPDRRAAYLADITYGTNNEFGFDYLRDNMVFSLEQRVQREHAYAIIDEVDSILIDEA
                     RTPLIISGPVGNETDDKYGQFNRQVADLVRKQTGVVNTLLAEAEKLLEDEKTRQDAAL
                     KLYQAQLGMPKNKKLLKMLNETGIKQLVQRMELDAIADRKLPIRQQRMRDTEDVLYFV
                     LDEKGHSVHLTDRGATAMSPGDPELFLVPDISEEIHRIDKNPELSPHDRVERRRQIEG
                     DYAIKSEKLHIIHKLLQAHALYEKEVDYLVQDGQVVIVDEFTGRVMTGRRWADGLHQA
                     VEAKEGVQVKGETQTFATITIQNYFRMYDKLAGMTGTAETEETEFYQIYGLEVSVIPT
                     HRPITRLDQVDRIYKTRREKYNAVLDEVERLHGLGWPILIGTVNVDVSETLSRQLKRR
                     GLKHEVLNAKYHQREAEIVANAGQTGSITIATNMAGRGTDIKLGKDLDLTQPEAGLQI
                     IGTERHESRRIDRQLRGRSGRQGDPGQSIFFLSLEDDLMRLFGSDRIARWMDKSGAEE
                     GEVITGGLVTRAIEQAQKRVELQNFQSRKRLLEYDDVMNQQREVVYSLRLFALERGEE
                     LKAEARRMIEAALERATTQFLAGTERAEEYDRGGLR"
BASE COUNT          362 a          926 c          875 g          511 t
ORIGIN      
        1 cggagcccgc cccggtcgta ttcctccgcc cgctcggtgc cggccaggaa ctgggtggtg
       61 gcacgctcca gcgccgcttc gatcatccgg cgggcctcgg ccttcagctc ctcgccccgc
      121 tccagcgcga acagccggag ggaatagacc acctcccgct gctggttcat cacgtcgtcg
      181 tactccagca gccgcttccg gctctggaag ttctggagct cgacccgctt ctgcgcctgc
      241 tcgatggccc gggtcaccag gccgccggtg atgacctcgc cttcttcggc gccgctcttg
      301 tccatccacc gtgcgatccg gtcggacccg aacagccgca tcaggtcgtc ttccagcgag
      361 aggaagaaga tcgactggcc cggatcaccc tggcggccgg agcggccacg gagctggcgg
      421 tcgatccgcc gggactcgtg ccgctcggtg ccgatgatct ggagcccggc ctccggctgg
      481 gtcaggtcca gatccttgcc cagcttgatg tcggtgccgc ggccggccat gttggtcgcg
      541 atggtgatcg acccggtctg gcccgcgttg gcgacgatct ccgcttcccg ctggtggtac
      601 ttcgcgttca gcacctcgtg cttgagcccc cgccgcttga gctggcgcga cagggtctcc
      661 gacacgtcca cgttcaccgt gccgatcagg atcggccagc ccagcccgtg cagccgctcg
      721 acctcgtcca gcacggcatt gtacttctcc cggcgcgtct tgtagatccg gtcgacctgg
      781 tcgagacggg tgatcggccg gtgggtgggg atgacgctca cctccagccc gtagatctgg
      841 tagaactcgg tctcctcggt ttccgcggtg ccggtcatcc ccgccagctt gtcgtacatc
      901 cggaaatagt tctggatcgt gatggtggcg aaggtctggg tctcaccctt gacctgcact
      961 ccctccttgg cctccaccgc ctggtgcagt ccgtcggccc accggcgtcc ggtcatcacc
     1021 cggccggtga actcgtccac gatcaccacc tgcccgtcct gcaccaggta gtccacttcc
     1081 ttctcgtaca gggcgtgggc ctggagcagc ttgtggatga tgtggagctt ctcgctcttg
     1141 atcgcgtagt cgccctcgat ctggcggcgc cgctccaccc ggtcgtgagg cgagagctcg
     1201 gggttcttgt cgatccggtg gatctcctcc gagatgtcgg gcaccaggaa cagctccgga
     1261 tcgccgggcg acatcgccgt ggcgccccgg tcggtcaggt gcaccgagtg ccccttttcg
     1321 tcgagcacga agtacagcac gtcctcggtg tcgcgcatcc gctgctgccg gatcgggagc
     1381 ttgcggtcgg cgatggcgtc gagctccatc cgctggacca gctgcttgat cccggtctcg
     1441 ttcagcatct tcagcagctt cttgttcttc ggcatgccca gctgggcctg gtagagcttg
     1501 agcgccgcgt cctgcctggt cttctcgtcc tccagcagct tctcggcctc ggccagcagg
     1561 gtgttgacca ctccggtctg cttccggacc aggtccgcca cctgacggtt gaactgaccg
     1621 tacttgtcgt cggtctcgtt ccccaccggc cccgagatga tcagcggggt ccgcgcctcg
     1681 tcgatgagga tcgagtccac ctcgtcgatg atggcgtagg cgtgctcccg ctggacccgc
     1741 tgctccagcg agaacaccat gttgtcgcgg agatagtcga agccgaactc gttgttggtg
     1801 ccgtaggtga tgtcggcgag gtaggccgcc cggcggtcgg gcgaggacgg ctcggtatcg
     1861 tccaggcagg cgacggtgag gccgagatac gtgaagacgt ggcccatcca ctgcgaatcg
     1921 cggcgggcca ggtagttgtt gaccgtgacc agatgggcgc cccgcccggt gagggcgttc
     1981 aggtagagcg gcagggtggc caccagcgtc ttgccttcgc cggtggccat ttccgcgatc
     2041 ttgcccgagt ggagcaccac gccgccgatg agctgcacgt cgtagggcac catgtcccag
     2101 accagctccc gcccggtcac catgaccgtg gtgcccagca gccggcggca ggcctcccgc
     2161 accgtggcgt aggcctccgg aagcaggtcg tcgaggccgg ccgcgagctc cttcttccac
     2221 tgcgcctcga gctggtggaa ccgctgctcc agctggtccc gctcggccgg atcggcgcag
     2281 ccgtgcttgg ccgcgcgcac ctcctccagc tcggccttga ccgcgccggt gcgctcggcc
     2341 agccgggccc ggaaggcccc ggtctgggcc ttgagctctt cttcagacag atccttgagc
     2401 cgctcctcgt gccggtggat ggcatcgacg atcggctgga tccgcttgcg gtcgcggtcg
     2461 aagcgagtgc cgaagaccgc ggtcatcagg gatttgatca tgctgggtcc aaatataacc
     2521 ggtgtctgga gatatactcc gccaccgagt ccggcaccca gtaccgcagc gagcggccct
     2581 cgcgggcccg gcggcggatc tcggtagcgg agatgtcgag cccggggacc tcgatcgcgg
     2641 ccgagatcag gggcgagtcg gggaccggcg agcc
//
LOCUS       DATIFF010000770         2706 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_253330, whole genome shotgun sequence.
ACCESSION   DATIFF010000770 DATIFF010000000
VERSION     DATIFF010000770.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2706
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253330"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1166)
                     /locus_tag="VLD58_11185"
     CDS             complement(<1..1166)
                     /locus_tag="VLD58_11185"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSB54915.1"
                     /translation="MRSTYMLALLALAGCAAPAYRAPVVPLPASFRETSDASRTAPVT
                     GAAAEAAPGPAVAAEVSLESWQQLGDTTLSRLLRDVVSANLDVRSAQARLREARAART
                     RSALDLTPSATVAGGYTRQRLSSATFPNASGTFPDQDVWDAGFDASWELDLFGRLRRT
                     VQAQGALVDAAHEDLRNLQVVLAAELARTYFELRGAQEQLEVARRNAENQQHTFQVTK
                     DRLDAGRGSAFDTDRAQAQLSTTLASIPDREAQVAAAQYRIGVLVGRSPSAVAAELAQ
                     SARLPALPVVGDIGSPDSVVRNRPDVALAERRAAAQRALVGAAKADYLPRLSVGGSAG
                     FTSQSFDRLGDHGSFRYAVGPVISWPALNLGRIKADVDVAQARQEAAESEYTRVV"
     gene            complement(1159..>2706)
                     /locus_tag="VLD58_11190"
     CDS             complement(1159..>2706)
                     /locus_tag="VLD58_11190"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSB54916.1"
                     /translation="RYAKALDVALTMRWAIVAAALLVMVGAYPLYQFSRRELAPVEDQ
                     SHISLFMQASPDASLEATNKASLQVVKAVTSFPEAKFMWSLTAPWGGFGGMVTKNWKE
                     RSRTTEQMYGALYGAVSQVPGLQVFPRLDPPLPTPGQYDVEMVLESDAPPEQLLSTVG
                     QVIGAGWQSGKFLYVDTDLKIDLPEARVVIDREQVADLGLDLASVGRELGTLLGGGYV
                     NRFNYYDRSYKVIPQIGAEGRTTVGPLLDLKIKTPSGRLVPVSTFTHIESSTAPRTLN
                     RFQQRNAVRIFGGVKPGVTKEEGLRVLETAAAAAAGPGVQTDYAGESRQIRLEGSALT
                     VTLGFAVILIYLVLAAQFKSFRDPLIVLLGSVPLAISGALVFSFLNLTTINIYSQVGL
                     ITLVGLIAKNGILIVQFANTLQSQGVARLAALREASLTRLRPVLMTSVATVFGHFPLV
                     IATGPGSAARNSIGIVLVAGMTVGTLFTLFVVPVFYSLIAAEHRPETVREPAVAEGLV
                     MGEVAHA"
BASE COUNT          424 a          968 c          918 g          396 t
ORIGIN      
        1 accacgcgcg tgtattccga ctccgcggct tcctgccggg cttgtgccac gtcgacgtct
       61 gctttgatgc ggcccaggtt gagcgccggc cagctgatca ccggccctac cgcgtagcgg
      121 aagctgccgt gatcgcccag ccggtcgaag ctctgggagg tgaagccggc gctgccaccc
      181 acgctgagcc gcggcagata gtcggccttg gctgcgccca ccagcgcccg ctgcgccgcc
      241 gcccgccgct cggccaaggc cacgtcgggg cggttccgca ccaccgagtc ggggcttccg
      301 atgtctccca ccaccggcag cgccggcaac cgcgccgact gcgccagctc ggccgccacc
      361 gccgaagggg agcgccccac cagcacgccg atgcggtact gtgccgcggc cacctgcgcc
      421 tcgcggtcgg gaatcgaggc gagtgtggtg ctcaactgcg cctgggcccg gtcggtatcg
      481 aacgcgctcc cccggccggc atcgagccgg tccttggtga cctgaaaggt gtgctgctgg
      541 ttctcggcgt tccgccgggc gacctcgagc tgctcctgcg cgccccgcag ctcgaagtag
      601 gtccgcgcca gctcggctgc gagcaccacc tggagattcc tgagatcctc gtgcgccgcg
      661 tccaccagcg caccctgcgc ctgcaccgtg cggcggagcc gcccgaagag atccagctcc
      721 cacgaggcgt cgaagccggc gtcccacacg tcctggtccg ggaaggtgcc ggaagcgttg
      781 gggaaagtcg cgctcgagag acgctgccgg gtatacccgc ccgccaccgt ggccgagggg
      841 gtgaggtcga gggccgaacg agtcctggcc gcccgcgcct cacggagccg cgcctgagcc
      901 gaacgcacgt cgaggttggc gctcaccaca tcgcgcagca ggcgcgacag ggtcgtatcg
      961 cccagctgct gccaggactc gagcgaaacc tcggccgcta ctgccggtcc gggcgctgcc
     1021 tcggccgccg caccggtcac cggcgcggtc cggctcgcat cggacgtctc gcgaaacgac
     1081 gcgggcagcg gcactaccgg cgcccgatag gctggcgccg cacagcccgc gagcgccagc
     1141 agcgccagca tgtacgtact acgcatgtgc cacctctccc atcacaaggc cttcagccac
     1201 ggccggctcc cggaccgttt ccggccggtg ctccgcggcg atcagcgagt agaacaccgg
     1261 gaccacgaac agcgtgaaca gcgtgccgac ggtcatcccc gccaccagca cgatcccgat
     1321 gctgttgcgg gccgccgagc cgggtccggt ggcgatgacc agggggaagt ggccgaacac
     1381 ggtggccacc gaggtcatca gcaccggccg gagccgggtg agcgatgcct cgcgcagcgc
     1441 ggcgagccgg gccacgccct gggactgcag ggtgttggcg aactgcacga tcaggatgcc
     1501 gttcttggct atcagaccga ccagcgtgat caggccgacc tgcgagtaga tgttgatcgt
     1561 cgtcaggttg aggaagctga agaccagcgc gcccgaaatg gccaggggca ccgagccgag
     1621 cagcacgatc agcggatcgc ggaagctctt gaactgcgcc gccagcacca ggtagatcag
     1681 gatcaccgcg aagccgagcg tcacggtcag ggccgagccc tcgagccgga tctggcgcga
     1741 ctcaccggcg tagtccgtct gcacgcccgg tcccgcagcg gcggccgccg cggtctccag
     1801 cacccggagt ccttcttcct tggtgacgcc cggcttgacc ccaccgaaga tccggaccgc
     1861 gttacgctgc tggaaccggt tcagggtgcg gggcgcggtg ctcgactcga tgtgcgtgaa
     1921 ggtcgagacc ggtaccagcc gcccgctcgg cgtcttgatc ttgaggtcga gcagcggacc
     1981 gaccgtggtg cggccctcgg ctccgatctg gggaatgacc ttgtagctcc ggtcgtagta
     2041 gttgaagcgg ttgacgtacc cgccgcccag cagcgtgccg agttcccggc ccacgctggc
     2101 cagatcgagc cccaggtctg ccacctgctc gcgatcgatg actacccgcg cttcgggcag
     2161 gtcgatcttg aggtccgtgt cgacgtagag gaacttgccg ctctgccagc cggcgccgat
     2221 cacctggccc accgtcgaga gcagctgctc gggcggcgca tcgctctcga gcaccatctc
     2281 cacgtcgtac tgtccgggcg tggggagtgg cgggtcgaga cgggggaaga cctgcagtcc
     2341 cggcacctgg gagacggcgc catagagcgc gccgtacatc tgctccgtgg tgcggctccg
     2401 ctccttccag ttcttcgtca ccatgccgcc gaacccgccc cacggcgcgg tgagcgacca
     2461 catgaacttg gcctcgggga acgaggttac cgccttcacc acctgaagcg acgccttgtt
     2521 ggtggcctcg agcgaagcgt cgggtgacgc ctgcatgaac aggctgatgt ggctctggtc
     2581 ctcgaccggc gccagttccc gccgggagaa ctgatacagg ggataggcgc cgaccatcac
     2641 cagcagcgcg gccgccacga tggcccagcg catggtcagc gcaacgtcga gagccttggc
     2701 gtagcg
//
LOCUS       DATIFF010000771         1502 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_559845, whole genome shotgun sequence.
ACCESSION   DATIFF010000771 DATIFF010000000
VERSION     DATIFF010000771.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_559845"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(135..338)
                     /locus_tag="VLD58_11195"
     CDS             complement(135..338)
                     /locus_tag="VLD58_11195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54917.1"
                     /translation="MRALARFCIRIGFLPGSPRFARWISRQLFVPLHPRDQAAGMSGY
                     FELGEASPRAVKRFRDWWRTNGG"
     gene            complement(440..733)
                     /locus_tag="VLD58_11200"
     CDS             complement(440..733)
                     /locus_tag="VLD58_11200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54918.1"
                     /translation="MNRRIAIVEIEHTMFGLLMRGRRDAALTSDWPDDATIVGGEYNL
                     DRGVVRLLVESAMFDEVPPGHMVPQWTPVLTAHVVEPPAAALIDLIEKMQEGD"
     gene            complement(730..912)
                     /locus_tag="VLD58_11205"
     CDS             complement(730..912)
                     /locus_tag="VLD58_11205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54919.1"
                     /translation="MIVAWRRALSSPLEEEEIDWPPGWRLPSAGDSVHLSGNRGGFVE
                     SIDFDIGRQAIRVNIR"
     gene            complement(1041..1292)
                     /locus_tag="VLD58_11210"
     CDS             complement(1041..1292)
                     /locus_tag="VLD58_11210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54920.1"
                     /translation="MIGPLLIVVAALDGLTGLSLPHGAEANLVPAAAPVAAFALKIAL
                     AGVVAFLALRRFRYFDRVVQAAIGLWAIGLASNLAVLVR"
     gene            complement(1289..>1502)
                     /locus_tag="VLD58_11215"
     CDS             complement(1289..>1502)
                     /locus_tag="VLD58_11215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54921.1"
                     /translation="SHAPSTRTTEEITVKDWVKIKSWHLTSGLVSRTGLVHTLCGKWA
                     PAGTPGPLPANAKSCERCFQLREQAG"
BASE COUNT          247 a          529 c          515 g          211 t
ORIGIN      
        1 caggctcctt gggcaacttc gggacgcagt cgtggcacag cccgatcggg ccaccaccga
       61 tgccgcgttg gatcgaggtc gggctgatcc ggtcgctgcc gcagttggag cacaccaggt
      121 cggccgcata gaagtcatcc accgttcgtc ctccaccagt cacgaaagcg cttgaccgcc
      181 cgggggctcg cctccccgag ctcgaagtag ccgctcatgc ccgccgcctg gtccctcggg
      241 tggagcggca cgaacaactg ccggctgatc cagcgggcga acctcgggct gcccggcagg
      301 aacccgatcc gaatgcagaa acgagcgagt gccctcatcc caagcccatt cgggagacgg
      361 ctatcgccgg gacaccccag tatgccctcg cgacacgatg ggcgagccga cccgctcgcg
      421 ctagatggta catggcccgt caatcccctt cctgcatctt ctcgatgagg tcgatcagcg
      481 ccgccgctgg cggctcgacg acatgggcgg tgagcaccgg cgtccactgc ggaaccatgt
      541 ggcccggagg cacctcgtcg aacatcgccg actcgaccag cagacgcacg acgccccggt
      601 cgaggttgta ctcgccgccg acgatggtcg cgtcgtccgg ccagtcggag gtgagggccg
      661 cgtcccgtcg gccgcgcatg agcagcccga acatcgtgtg ctcgatctcg acgatggcaa
      721 tccggcggtt caccggatgt tcacccggat ggcctgacgg ccgatgtcga agtcgatgct
      781 ctcgacgaag ccgcctcggt tgccggagag gtggaccgag tcccccgccg aaggcaatcg
      841 ccaacccggg ggccagtcga tctcctcctc ctccagcggg gaactcagtg cccgccgcca
      901 agcgacgatc acccgcgtcg ctccgtcggc aggcgtcagc gccactcgga gcggcggggc
      961 cagcggtgct ggcggcggag gcagcggccg tggacgagtc ggctcgggga actccctgac
     1021 ccggccgcgc ctgcccgggc tcatcggacg aggaccgcga ggttggaggc gaggccgatc
     1081 gcccacaggc cgatggctgc ctgcacgacc cggtcgaagt accggaaccg gcgcagggcg
     1141 aggaacgcca ccacgccggc cagcgcgatc ttcagggcga acgcggcgac cggtgccgcc
     1201 gcaggcacga ggttggcctc ggcaccatgc ggtagcgaca gcccggtcag gccatcgagg
     1261 gcggccacga cgatcaggag aggaccgatc acccggcctg ctcgcggagc tggaagcagc
     1321 gctcgcacga cttcgcgttg gcgggcagcg ggccgggcgt cccggccggt gcccacttgc
     1381 cgcacagggt gtggacgaga ccggtccggc tgacgaggcc ggaggtcaga tgccacgact
     1441 tgatcttgac ccagtccttc acggtgatct cctcagtcgt ccgggtgctt ggggcgtgac
     1501 tt
//
LOCUS       DATIFF010000772         2716 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_98601, whole genome shotgun sequence.
ACCESSION   DATIFF010000772 DATIFF010000000
VERSION     DATIFF010000772.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2716
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98601"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..586)
                     /locus_tag="VLD58_11220"
     CDS             complement(<1..586)
                     /locus_tag="VLD58_11220"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSB54922.1"
                     /translation="MTLLRRVFAFLLLLTVPAARLAAQSEANVELLANLLAAEDARQW
                     DEPTLRAALNHPDSSVRSAAAMSIGRLRDARGIPLLVPRLRDPDSLVQTNTAFALGLL
                     GDTSAVQSLVDRARDPQGVSGSAAMELITAIARLGGERAAAFLRDVMQGSLYAARDDQ
                     PYLARRAALEAWRLGRNAPVDALLSLVNDPKEDTR"
     gene            complement(583..999)
                     /locus_tag="VLD58_11225"
     CDS             complement(583..999)
                     /locus_tag="VLD58_11225"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HSB54923.1"
                     /translation="MPHLQAESVTTHRVNYSETDQMGVVYHARHVVWLDIARTEHLRL
                     AGYSYRELEEQGIRLVVTDLSIRYIGAARYDDIIEIRCRVKEARSRRVIFTYRLETGG
                     THIADAETTLMCLDHNHRLSRLPAAVIAALEPRVAE"
     gene            1143..1877
                     /locus_tag="VLD58_11230"
     CDS             1143..1877
                     /locus_tag="VLD58_11230"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008758 - UDP-2,3-diacylglucosamine
                     hydrolase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HSB54924.1"
                     /translation="MHCQRAVLVGDAHLGRGSPDTERAFLAFLETVPDLGDGLVITGD
                     LFEFWFSYHRVVPRRNLAVVAGLAALRRRLPILMAGGNHDRWGGDFWHDDFGIEFAPG
                     EARFELAGRPAAVIHGDGITESHWSGRLLHQVTSHGATVSLFRAIHPDLGLWLIDRLS
                     GVLGDRPRTEAEIAAASAHQAGWARQRLDSQGDLSLIVMGHTHRAAVAGPAGSRYVNP
                     GAWFDGYRYAVVDAAGAELRQFTQKG"
     gene            1886..>2716
                     /locus_tag="VLD58_11235"
     CDS             1886..>2716
                     /locus_tag="VLD58_11235"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB54925.1"
                     /translation="MTEAVAGNDPIMRELEAAIAGRYSLERELGRGGMGAVYLARDLR
                     LDRPVAIKVLPPELAVRPELRERFLRETRTAASFSHPNIVSVYSVEETPGLLFFVMSY
                     IEGETLSQRVKRQGPLPVPEALRLLQEVAWALSYAHGRGVVHRDIKPDNVLLEKSTGR
                     ALVMDFGIARSVAATGLTQVGEAVGTPHFMSPEQAAGDAVDGRSDLYSLGVVAYFAVS
                     GRLPFDGESAQAVMVAHISQPATPVSRFRPDLPGPLAAAIDRCLAKAPEQRFATGESL
                     V"
BASE COUNT          389 a          888 c          989 g          450 t
ORIGIN      
        1 agcgggtgtc ttccttcggg tcattcacca ggctgaggag cgcatcgacc ggcgcgttcc
       61 ggcccagccg ccaggcttcg agcgcggctc ggcgggcaag gtagggctga tcgtcccggg
      121 cggcgtacag cgagccctgc atcacatccc ggaggaacgc cgcggcgcgc tcgccaccca
      181 gccgggcaat cgccgtgatg agctccatgg cggcgctgcc gcttacgccc tgcggatcgc
      241 gggcccggtc gaccaggctc tgcacggcgg aggtgtcgcc cagcaggccg agggcgaacg
      301 cggtgttggt ctggaccagc gaatcgggat cgcggagccg gggcaccagg agcgggatac
      361 cacgcgcgtc gcgcaggcgt cctatggaca tggccgccgc gctccggacc gagctatcgg
      421 gatgattgag cgcggcgcgg agcgtgggtt catcccactg ccgggcgtct tcagcggcga
      481 ggaggttggc cagcagttcg acgttggctt cgctctgggc cgcgagccgg gcggccggaa
      541 cggtgaggag cagcaggaag gcaaagacac gccggagcag agtcactcgg caactcgcgg
      601 ttcgagggcg gcgatcacgg cggcggggag ccggctcagc cggtggttgt ggtcgaggca
      661 catgagcgtg gtctcggcat cggcgatgtg ggtgccgccg gtttcgagcc ggtaggtgaa
      721 gatcacccgg cgggagcggg cctccttcac ccggcagcgg atctcgatga tgtcatcgta
      781 ccgggccgcg ccgatatagc ggatcgagag gtcggtcacg accagccgga tcccctgctc
      841 ttccagctcg cggtagctgt agccggccag ccgcagatgc tcggtccggg cgatatcgag
      901 ccagaccacg tggcgcgcgt gatacaccac ccccatctgg tcggtctcgg agtagttgac
      961 ccggtgggtg gtgacggatt cggcttggag gtggggcaca ggtcgagatg tcttgggtct
     1021 ggggtcgaga ggtctagagg tccaggggtc cagaggtcta gaggtctagg gtctggcatc
     1081 cgctgtaagg tattctcctc tcgccgcttc cgccccctcg tggcgacctc tatcttcgct
     1141 ccgtgcactg ccagcgcgcc gtactcgtgg gtgacgccca cctcgggcgg ggttcccccg
     1201 acaccgaacg ggcctttctc gcgtttctcg agaccgtgcc tgatctgggt gacgggctgg
     1261 tgatcaccgg cgatctcttc gaattctggt tcagctatca ccgggtggtg ccccgccgga
     1321 atctggcggt cgtcgcgggg ctcgcggccc tgcgccggcg gctccccatc ctcatggcgg
     1381 gcggcaacca cgaccgctgg ggcggggatt tctggcacga cgatttcggg atcgagtttg
     1441 ccccgggcga ggcccgcttt gagctggcgg ggcggccggc ggcggtgatt catggagacg
     1501 gcatcaccga gagccactgg tcggggcggc tgctccatca agtcaccagc catggcgcga
     1561 ccgtctcgct gttccgcgcc attcatccgg accttggtct ctggctgatc gatcgcctga
     1621 gcggggtcct gggcgaccgc ccccgcaccg aggccgagat cgccgcggca tcggcgcacc
     1681 aggcaggatg ggcaaggcag cgcctcgaca gccaaggtga cctgtcgctg atcgtcatgg
     1741 ggcataccca tcgtgcggcg gtggccggtc cagccgggag tcgctacgtg aatcccggcg
     1801 cctggttcga cggctatcgc tacgctgtgg tcgatgcggc cggggccgag ttgcggcagt
     1861 tcacccagaa agggtgaggg ctctgatgac cgaggcggtg gcgggcaacg atccgatcat
     1921 gcgcgagctc gaagccgcca tcgccgggcg gtactcgctc gagcgcgagc tgggccgcgg
     1981 cggaatgggt gcggtctatc tcgcgcgcga tctccggctc gaccggccgg tcgccatcaa
     2041 ggtgctgccc cccgaactgg cggtacgccc ggagctccgc gagcgtttcc tgcgcgagac
     2101 ccgcaccgcc gcctcgttca gtcaccccaa catcgtatcg gtgtactcgg tggaggagac
     2161 tcccggtctc ctcttcttcg tcatgagtta catcgagggc gagacgctga gccagcgggt
     2221 gaagcggcag ggccccctgc ccgtccccga ggcgctgcga ctgctccagg aggtagcctg
     2281 ggcgctctcc tacgcccacg gccggggcgt ggtgcaccgc gacatcaagc ccgacaacgt
     2341 cctgctggag aagagcaccg gccgggcgct ggtgatggac ttcgggatcg cgcggtcggt
     2401 ggcggcgact ggcctgaccc aggtcggtga ggccgtgggg acacctcact tcatgagtcc
     2461 ggagcaggca gccggcgatg ccgtggacgg gcgaagcgat ctctactcgc tcggtgtggt
     2521 ggcctacttc gccgtgagcg gacggcttcc cttcgacggc gagagcgcgc aggcggtgat
     2581 ggtggcccac atcagccagc cggcaacccc ggtgagccgc ttccggccgg atctccccgg
     2641 cccgctcgcc gccgcgatcg accggtgtct cgccaaggct ccggagcagc gattcgccac
     2701 cggcgagtcg ctcgtg
//
LOCUS       DATIFF010000773         1685 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_98735, whole genome shotgun sequence.
ACCESSION   DATIFF010000773 DATIFF010000000
VERSION     DATIFF010000773.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1685
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98735"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..817)
                     /locus_tag="VLD58_11240"
     CDS             complement(<1..817)
                     /locus_tag="VLD58_11240"
                     /inference="COORDINATES: protein motif:HMM:NF015563.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54926.1"
                     /translation="MSRPRFRFPHPLVLLVLCVLVAAALTWLLPAGEYQRRDDPVTGR
                     QVVVAGTYQAVEASPVDGFGAVVAIPKGMTDAASVIFYVFLVGGAFAVVERTGALAQL
                     VNWLAQRLAQRGLWVIPIAGFAFGWGGVLIQMQEELIAFVPVLLLLTRRLGFNAVVAV
                     AMSLGASAIGASFSFINPFQVGIAQKVAGLPLLSGTGFRAIFLVIAWVIWIAGTMQFA
                     RRTRVAPGAVDTDAPPTGAGWRQGAVLAIVVLAFVVFIVGVTRYGWDFEQLSAV"
     gene            complement(834..1106)
                     /locus_tag="VLD58_11245"
     CDS             complement(834..1106)
                     /locus_tag="VLD58_11245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54927.1"
                     /translation="MTARGRNITLLVLLGFVAFLLWSTLSSQRVECAVEIEYLGRHGS
                     GTASGASEGDAMREAQTAACGPITGSMNDRIACSKIAPVSRRCRTL"
BASE COUNT          281 a          586 c          591 g          227 t
ORIGIN      
        1 acaccgccga cagttgctcg aagtcccagc cgtagcgcgt gacgcccacg atgaagacga
       61 cgaaggcgag gacgacgatg gccaggacgg ccccctggcg ccaccccgcg ccggtgggcg
      121 gcgcatcggt gtccaccgcg cccggcgcga cccgcgtgcg ccgagcgaac tgcatcgttc
      181 cggcgatcca gatcacccag gcgatgacga ggaagatggc gcggaagccg gtcccgctga
      241 ggagcggcag ccccgcgacc ttctgggcga tgccgacctg gaaaggattg atgaagctga
      301 acgaggcgcc gatagccgat gccccgagac tcatggccac ggcgacgacc gcgttgaagc
      361 cgagccggcg ggtgagcagg agcaggaccg ggacgaaggc gatcagctcc tcctgcatct
      421 ggatcaggac gccgccccag ccgaaggcga agccggcgat cgggatgacc cagagtcccc
      481 gctgggccag ccgctgggcc agccaattga cgagctgcgc cagcgcgccg gtccgctcga
      541 ccacggcgaa cgccccgccg accaggaaga cgtagaagat gaccgaggcg gcgtcggtca
      601 tccccttggg aatcgcgacg accgccccga acccgtccac cgggctggcc tcgacggcct
      661 ggtaggtgcc cgcgaccacg acctgccggc cggtcacggg atcgtcgcgg cgctggtact
      721 cgcccgccgg cagcagccac gtcagcgcgg ccgcgaccag gacgcagagg acgaggagga
      781 cgagagggtg agggaaacgg aagcgggggc ggctcacggg tgcgcccccg cggtcacagc
      841 gtccggcagc gccggctcac gggcgcaatc ttggagcagg cgatccgatc gttcatggag
      901 ccggtaatcg gcccgcaggc ggcagtctgg gcctcgcgca tggcgtcgcc ttccgatgcg
      961 ccggaggccg tcccgctgcc gtggcgcccg aggtactcga tctcgacggc gcactccacc
     1021 cgttggctgg agagggtgga ccacagcagg aaagccacga accccagcag gacgagcagc
     1081 gtgatgttcc tgccgcgcgc ggtcatggcc gaggaacctc cgtcgggggt gctgtgttca
     1141 ccagagcgta gcggtatggc cggtggccgt agctgccccg cgaactagga atggtgcgaa
     1201 tggaatgtcc ggaggttgcc cgccggctct gggaatatct tgacgacgag cttgccgcga
     1261 aagaggcccg ggcaatcgaa acccacctgg ccggctgccg gccctgtcat gcccggtgtc
     1321 gccttgagcg cgccttcctg gcctgtctgg cccgcagctt gtcacggccc tgccccgtcc
     1381 ccgaacgcct ccgggtaaat ctcgacgggt tgctccatgt ccaggatgcg cggtggtaag
     1441 gtccgctcga cctccctggt acgcctgaaa atgccctcgc ccggccgagc gctgctcctg
     1501 gccggcctga tgttcgtgga cggagtcgtc ggcttgacgc ggtgccgcgg cgctaccccg
     1561 cgacgtcgag gtccgcccgt gatgtgagcg cccgtccgga tcgccgcaag ccgttgcaga
     1621 gtccggcgaa aggttgaaca gcaccgctcg gccgcagccc gttggcccca tcctaccttc
     1681 ctgtc
//
LOCUS       DATIFF010000774        12870 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1329539, whole genome shotgun sequence.
ACCESSION   DATIFF010000774 DATIFF010000000
VERSION     DATIFF010000774.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12870
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1329539"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..698)
                     /locus_tag="VLD58_11250"
     CDS             complement(<1..698)
                     /locus_tag="VLD58_11250"
                     /inference="COORDINATES: protein motif:HMM:NF037667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54928.1"
                     /translation="MKTLPIGMMLLSAATVTLAAQQPGVVGEYHAPRTWPEQPKRFDL
                     LHQAIHIRFDAPHRQLLGEVTTRVALTQPTDTIRLEAENLTIDRASGAGGRRLKFTQD
                     TAHVTVRLARAGKPGDTVEVTLAYHGFPERGLYFVPRRNVVWSQGEATETRAWVPTYD
                     APNDKTTWEFFVQVDTGLVVLSNGRLVDVTPASGGREKIWHWSQERPASTYLYSVVAG
                     PFTVLHDQWRGIPV"
     gene            complement(757..3408)
                     /locus_tag="VLD58_11255"
     CDS             complement(757..3408)
                     /locus_tag="VLD58_11255"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSB54929.1"
                     /translation="MSPLDFERFFELSLDMLGIASVEGRYIRVNIAFQQHLGWPAGEL
                     TGQPFTAFVHPEEVEATSRELDRLTAGASTRGFQTRYRGSDGNYRLILWTAVRDAESG
                     LVFMIGRDLTEQDETEQRVRAQERRFQALIEHSADVTVLLGVDGRFKYLSPSFEAVLG
                     FPVAQWLGQVVFGLIWPDDVKLTERLFARSIGSPGVAVPFQLRLRHPAGGFRWLEGTG
                     VSYVEDPATEGIVINCRDITERKRAEEALLRSSDLLGRLAQQVPGVIYQYRLYPDGHS
                     CFPFATDAMREIYEVTPEEVREDASVVFGRLHPDDYAVVAASIERSARTLEPWRCDYR
                     VVLPVQGVRWRSGLAQPERKDDGSILWHGFISDVTEKKLAEEELRRKEAAIASSINGI
                     AMSDLAGTLTYVNRAFLDLWGYRDPAEVLGRSVAEFTESPEVAAEIVTAIQTHGAWSG
                     ELVARRPDGITLTLQTNGSLFTDSAGKPAGMLGSFVDVTESKRLQQQFLQAQKMDSVG
                     RLAGGVAHDFNNLLTVMKGYLELARLGLAPDNPVCADLSEAAKAADSAGTLTQQLLAF
                     SRKQLINPKVLNLNDVVLRVEGMLHRVLGEDIELRTVTTPKLGSVRFDPGQGEQILIN
                     LAVNARDAMPKGGTLTIETANARLDESYARTHPGTPAGDYVMLAVSDTGSGMTDEVKS
                     HLFEPFFTTKAPGSGTGLGLAMIFGAVSQNGGRIDVYSELGHGTTFRIFLPRVPAAAG
                     EEAPEETLAPPRGKETILLVEDDDRVRRLAARLLERLGYRVLAYNGGPAAIEAVRGMV
                     EPLHLLMTDVIMPVMNGQRLSEEIRLLRPGIRVLFTSGYTADVIMQHGVLEEGVEFLA
                     KPYSIGALAQRVREVLERPAAAAAIHT"
     gene            complement(3444..4517)
                     /locus_tag="VLD58_11260"
     CDS             complement(3444..4517)
                     /locus_tag="VLD58_11260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54930.1"
                     /translation="MRRLIPLVLGLLFPLALAPAAAQSPALRLRMQPVRDPMMGNEEA
                     FRLLVPHDWRTEGGLVWRSELSTLVYLQLRLSDPRGVAGLEFFPTPPFTWSMQGYPGF
                     PPGSLYLGSYVAQPMDPENFVRQLILPQLRGRVSPRVIRTEPLPKLAQEVAPSVQEAG
                     AVKQVVAARTRIEYEEGGRALEEDIYVVLVYSQVPLTPQYVWWGPDRAFGFRAEKGQL
                     DRQAPLLEAMLASLRVNRLWFAKVIQVRQMWIQNQMQAIRNAAELSRYIARTSDEISD
                     MQQQAWENKRASEERTSQAYTEYIRGVETYHDSYAGRDVHLPTGYSQVWASRDGEYIL
                     ANDVNFNPNEGGRGTWQRIGPAQ"
     gene            complement(4595..5533)
                     /locus_tag="VLD58_11265"
     CDS             complement(4595..5533)
                     /locus_tag="VLD58_11265"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase family protein"
                     /protein_id="HSB54931.1"
                     /translation="MPAKTSVLDAIGNTPLVELRRVVPEGCARIFVKVEGQNPTGSMK
                     DRMAQAMIAGAEADGRLQPGHTVVEYTGGSTGASLALVCAAKGYRLRIVTSDAFSEEK
                     LVQMAAFGAELTVLPSEGGKITRDLILRMIDTARAMSQEPHSYWTDQLRNTDSITGYA
                     TLGHEIVAQSDGPVAAFVQAIGTAASLRGTARVLTQAYPDIRIVAVEPGESAVLSGGQ
                     PGAHRIEGIGIGYIPPMWDPALPHRIIPVTTADAEAMARRLAREEGLFAGTSSGANVV
                     AAIVAGRELGPQARVVTLLVDSGLKYLSTGVYRRGP"
     gene            5624..6595
                     /locus_tag="VLD58_11270"
     CDS             5624..6595
                     /locus_tag="VLD58_11270"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSB54932.1"
                     /translation="MRILVVALEGAFDTGLAALLDAFGTANELAELGGMSVSRFEVTV
                     VGTGRRVTTAQGMTRSTVPFPLRQTPDWVVVPAISVKLPAPLVAALGAPQVAAAGRAL
                     RTWATRGAGIAAACIGTFVLAESGLLDEHESTTTWWLAPLFRQRYPAVQLDETRMIVK
                     SGKVVTAGAALSHMDLALWLIRQKSPRLAALTARYLIVDSRPTQSAYAMVDHLAHNDP
                     MVERFESWARSRLKQGFSLDDAAVAVGASKRTLARRLAGVLGRTPLSYFQELRVERAV
                     HLLRTTDESVDQIAARVGYADGVTLRTLLRKKLGRGVRELRGGVGRG"
     gene            complement(6592..7671)
                     /locus_tag="VLD58_11275"
     CDS             complement(6592..7671)
                     /locus_tag="VLD58_11275"
                     /inference="COORDINATES: protein motif:HMM:NF027875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen-binding domain-containing protein"
                     /protein_id="HSB54933.1"
                     /translation="MRLPLYLILCTATAGALSAQTDLSVGVGANTVRYSGGSSTSGSL
                     SPAFRFTGPSTYLDMGGIIGTLENNRWSSVGRATLWLASPPLFGAVRASAEGNTSGTT
                     YTDGPWTVAAHGLGEVFWSGPRGGIGLAAGASSGWIKDQSSVTAFHGRARAWYQLGRS
                     SWSLSAEPTHFLGAWFTDVTAAASLDRGPVSLSAWGSARLSGTYPNRAAGGGAIAWYV
                     LPRLALELGGGSYLPDPYQGLIGAKYLSAGVRLHSARRIPPVTTVVRDSPMVPLRQGD
                     SVLVHFRMPGARTLALAGDWDGWTQHPLTDQGNSTWTGTLRLAPGLYHFVLLVDGTDW
                     VVPAGVTRVPDGMGGFAALLTVTEP"
     gene            complement(7775..8152)
                     /locus_tag="VLD58_11280"
     CDS             complement(7775..8152)
                     /locus_tag="VLD58_11280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54934.1"
                     /translation="MTRSIHFALVALAGLVLATPALAQVPAPRLNQHASDTAKVRLAS
                     LPHATQVRGSVVTPPNRPVTPATPAVPSSGATPATPGAGGSPAVPATPATPAVPPTHT
                     TPPAPPPHPGEPTSPGHSGGHRP"
     gene            8319..8927
                     /locus_tag="VLD58_11285"
     CDS             8319..8927
                     /locus_tag="VLD58_11285"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HSB54935.1"
                     /translation="MAGFPVWVSCTSAPQAEELISLEQENDAEVIRAVLAGEVERYAV
                     LVRRYRPRYASYAARVAGSIDSGEDAMQEAFIRAYDRLAQCRDPQNFRGWFFLILRNC
                     CFAEARARRRLDGLDDATDRPELQTEEQSSAALEGEEQRRELDRAMARLTPIQREVFA
                     MKHVEGLTYEQMAERLQTTVGSLKMRMHRAYDRLREELKGYL"
     gene            8924..9562
                     /locus_tag="VLD58_11290"
     CDS             8924..9562
                     /locus_tag="VLD58_11290"
                     /inference="COORDINATES: protein motif:HMM:NF027875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoamylase early set domain-containing protein"
                     /protein_id="HSB54936.1"
                     /translation="MTGSRSYHPEVKRLLDGELSLADLAPELRAEGEEALRLLGRVDR
                     TVPTFSPWFEQQVMAAVRRRPLPMRAGWWAWLNESRPLRYRPRLALVAAALGVMALGL
                     ALRGSTPTGAPVAAAQAQTYVRFVLYAPTAHRVTLAGSFNGWDASQTPLVPTGTSGLW
                     TVTVPLPAGNHLYGFMLDDKEWLPDPSAPAVDDGFGRRNSVLTVGPQEMARS"
     gene            9559..10263
                     /locus_tag="VLD58_11295"
     CDS             9559..10263
                     /locus_tag="VLD58_11295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54937.1"
                     /translation="MKKAAMVALLLAGAHGAAAQAPVTLEGRVAQPVATQVQALADSL
                     AHAGIPGQSLLRKALEGSAKGVPDERIVAAVRAVAGQLEQSAAALATARIGTDSQAIE
                     AGAYAINAGLKGEQVAAIARSSRPPYQPAASLQSAGTLVAMGVPGSQAVSLIQDWITA
                     GRSPSEVASLPSKVQAAMSPGLSASQAAQKMSKGGGGRGAAPNPPAPNPHAGGNPGTP
                     PPRPDHPDHPDTPHRP"
     gene            10330..11163
                     /locus_tag="VLD58_11300"
     CDS             10330..11163
                     /locus_tag="VLD58_11300"
                     /inference="COORDINATES: protein motif:HMM:NF014759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease H3TH domain-containing
                     protein"
                     /protein_id="HSB54938.1"
                     /translation="MIVHLVDGTYELFRHFYGLRRFNKGKDKQYGAVAGVLHSMLEMI
                     EQGATHLGVATDHVIESFRNELWPGYKTGDGIEPVLRRQFEPLEEALQAMGVAVWPMV
                     ELEADDGLASAAHLASADSRVEKVCIWANDKDLAQSVRGDRVVQVDRRGKQIRDSAAV
                     KQKFGVSPELIPDFLALVGDAQDGYPGIPGIGQATAARLLNRHGPIEGFPPNLLGEAQ
                     ADALLFKRLATLRTDAALFADVDTLRWAGPTEAFPAWAERIGDARLLERSRKAAAGLG
                     E"
     gene            11169..12101
                     /locus_tag="VLD58_11305"
     CDS             11169..12101
                     /locus_tag="VLD58_11305"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: protein motif:HMM:NF005091.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HSB54939.1"
                     /translation="MRIAIFGAGGVGGYFGGRLAEAGEDVTFIARGKHLEAMRERGLR
                     VGSIKGDFQIHPVRATDDPASVAPVDAVLLCVKAWQIREAAEAMRPLVGGETLVVPLE
                     NGVEAPDEIAEVLGAGHAAGGLCRVLAYITGPGEIRHSAIDPSLSFGELDGTVTRRVE
                     QLRDAFARCRGVAVDVPPDIRVAMWTKFLFIAPVSGIGAVTRSPIGVFREIPETRRML
                     VAAFEEIVQLAATLGVGLPSDAVQKTLAFTDGIPADGTASMQRDLMEGRPSELEAQVG
                     AVVRLADRAGIEVPVHRFLYAALLPQERRARGGR"
     gene            12161..12496
                     /locus_tag="VLD58_11310"
     CDS             12161..12496
                     /locus_tag="VLD58_11310"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HSB54940.1"
                     /translation="MPEHSTDVIQGTLDMLILKTLSLQPLHGFGIARRIEQISRGTFK
                     VNPGSLLTALKRLERAGWLDAEWRETENARRARIYRLTRAGRRQLEEETEQWSRKVSA
                     IARLLEAES"
     gene            12498..>12870
                     /locus_tag="VLD58_11315"
     CDS             12498..>12870
                     /locus_tag="VLD58_11315"
                     /inference="COORDINATES: protein motif:HMM:NF038403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease prefix domain 1-containing protein"
                     /protein_id="HSB54941.1"
                     /translation="MHLWRQVTRGLRGLFLPAQVHRETREEVEHYLAESEAAHRAAGL
                     STDAARRAALLEVGGVEQVTEAVRDTGWEVWFEALWADLRYALRRLRHEPGFTALTAL
                     TLALGIGSSTAILGAVIPVLFR"
BASE COUNT         2001 a         4361 c         4519 g         1989 t
ORIGIN      
        1 tccaccggga taccgcgcca ctgatcgtgc agcacggtga acgggccggc gaccaccgag
       61 tagaggtagg tggaggcggg gcgttcctgg ctccagtgcc agatcttctc cctgccgccc
      121 gacgccgggg tcacatcgac caggcggccg ttggagagta ccaccagccc ggtgtcgacc
      181 tgaacgaaga attcccaggt ggtcttgtcg ttgggggcgt cgtaggtcgg cacccaggcc
      241 cgggtctcgg tggcttcgcc ctggctccac acgacgttgc gccgggggac gaagtagaga
      301 ccgcgctcgg ggaagccgtg ataggccagg gtgacctcca ccgtgtcgcc cggcttgccg
      361 gcgcgagcga gccgcaccgt cacgtgcgcc gtgtcctggg tgaacttgag cctgcggccg
      421 ccggcgccgc tggcgcgatc gatggtgagg ttctcggcct cgagccggat ggtgtcggtc
      481 ggctgggtga gcgccacccg ggtcgtcact tcgcccagca gctggcggtg cggggcatcg
      541 aagcggatat gaatcgcctg gtgcagcagg tcgaaccgtt tcggctgctc cggccaggtg
      601 cgcggcgcgt ggtattcgcc gaccactccc ggttgctgcg cggcgagagt gacggtcgcg
      661 gcggacagca gcatcattcc aattggcagg gtcttcatgg ctcatccggt gagggccgga
      721 gggcgcgccg ggatgaacgc gcagacctcg gccaggtcag gtgtggatcg ccgccgcggc
      781 tgccggccgc tcgagcacct cgcgtacccg ctgggccagt gcgccgatcg agtagggctt
      841 ggcgaggaat tctactccct cctcgagcac tccgtgctgc atgatcacgt cggcggtgta
      901 gccggatgtg aacagtactc ggatcccggg ccggaggagg cggatctcct ccgacagccg
      961 ctggccgttc atgacgggca tgatgacgtc ggtcatcagc aggtgcagcg gttcgaccat
     1021 tccccgtacc gcctcgatcg ccgcaggccc gccgttgtag gccagcaccc ggtagccgag
     1081 ccgctcgagc aaccgggcgg ccagccgccg gacccgatcg tcgtcctcca ccagcaggat
     1141 ggtctccttg ccgcggggcg gtgccaaggt ctcctcgggc gcttcctccc ccgcagccgc
     1201 cggcacccgg ggcaggaaga tacggaaggt ggtcccgtgc cccagctcgg aatacacgtc
     1261 gatgcggccg ccgttctgcg acaccgcgcc gaagatcatc gccaggccca gcccggtgcc
     1321 gcttcccggc gccttggtgg tgaagaacgg ttcgaagagg tgcgacttta cctcgtcggt
     1381 catccctgac ccggtgtcgg aaacggccag catcacgtag tcgcccgccg gcgtaccagg
     1441 atgggtgcgg gcgtacgact cgtccagccg ggcgttggcg gtctcgatcg tcagggtccc
     1501 gcccttgggc atcgcgtccc gcgcgttcac cgccaggttg atcaggatct gttccccctg
     1561 gccggggtcg aaccgcaccg atccgagctt gggcgtcgtc accgtccgca gttcgatatc
     1621 ctcacccagt acccgatgca gcatcccctc cacccgcagg accacgtcgt tcaggttgag
     1681 gaccttggga ttgatgagct gcttgcggga gaaggccagg agctgctggg tgagtgtgcc
     1741 ggcggagtcg gccgccttcg ccgcctcgga gaggtcggcg cagaccggat tgtccggcgc
     1801 cagcccgagc cgcgccagct ccaggtagcc cttcatgacc gtgagcaggt tgttgaagtc
     1861 atgggccacg ccaccggcca gccgtcccac ggagtccatc ttctgcgcct gcaggaactg
     1921 ctgctgcagc cgcttcgact cggtcacgtc cacgaaggag cccagcatgc cggccggttt
     1981 cccggccgag tcggtgaaca ggctgccgtt ggtctggagg gtgagggtga tgccatcggg
     2041 gcggcgggcc accagctcgc cggaccaggc gccgtgcgtc tggatcgccg tgacgatttc
     2101 ggcggccacc tcgggcgact ccgtgaactc ggccacggac cggcccaata cctcggcggg
     2161 gtcgcgatag ccccagagat cgaggaacgc ccgattgacg taggtgagcg ttcccgcgag
     2221 atccgacatc gcgatgccgt tgatggacga ggcgatcgcc gcttccttcc ggcgcagctc
     2281 ctcctccgcc agcttctttt cagtgacgtc gctgatgaac ccgtgccaga ggatgctgcc
     2341 atcatccttg cgctcgggct gggccagccc gctgcgccag cggaccccct gcaccgggag
     2401 caccacccgg tagtcacagc gccacggctc cagggtgcgg gccgagcgct cgatggaggc
     2461 ggccacgacg gcgtagtcgt cggggtgcaa ccggccgaac accaccgagg catcctcccg
     2521 gacctcctcg ggcgtcacct cgtagatctc gcgcatggcg tcggtggcga acgggaagca
     2581 ggagtgcccg tcgggataga gccggtactg gtagatgacc ccgggcacct gctgggccag
     2641 ccggcccagc aggtcggagc tccgcaacag cgcttcctcc gcccgcttgc gctcggtgat
     2701 atcccggcag ttgatcacaa tcccttcggt ggcgggatcc tcgacgtagc tgacccccgt
     2761 cccttcgagc cagcggaagc cgccggcggg gtgccgcagg cgaagctgga acgggaccgc
     2821 cacaccgggc gacccgatgc tccgggcgaa gagccgttcc gtcagcttca cgtcatcagg
     2881 ccagatcagg ccgaacacca cctggccgag ccactgtgcc acggggaacc cgagcaccgc
     2941 ctcgaacgac gggctcaggt acttgaacct gccgtcgacc ccgagcagca cggtgacgtc
     3001 ggcggagtgc tcgatcaggg cctggaagcg ccgctcctgg gcccggaccc gctgctccgt
     3061 ctcgtcctgt tcggtgaggt cccgcccgat catgaacacc aggccgcttt ccgcatcgcg
     3121 gaccgcagtc cacaggatca ggcggtagtt gccgtcggaa ccgcgatagc gggtctggaa
     3181 gccgcgggtg gaagcgccgg cggtgagccg gtccagctcc cgtgaggtgg cctccacctc
     3241 ctcgggatgg acgaaggccg tgaacggctg gccagtgagt tcccccgcgg gccatccgag
     3301 gtgctgctgg aaggcgatgt tgacgcggat gtaccgcccc tcgacgctcg cgatgccgag
     3361 catgtcgagc gacagctcga agaaccgctc gaagtccagt ggcgacatgc ccatccccca
     3421 gggtcccgag gcctctggcg cggctactgc gccggcccga tccgttgcca ggtccctcgg
     3481 cctccctcgt tggggttgaa gttcacgtcg ttggccagga tgtactctcc atcccgcgag
     3541 gcccagacct gggagtaccc ggtcggcagg tgcacatcac ggccagcgta gctgtcgtga
     3601 taggtctcca ccccgcggat gtactcagtg taggcctgcg aggtgcgctc ctccgacgcc
     3661 cgcttgttct cccacgcctg ctgctgcatg tcgctgatct cgtcgctggt ccgggcgatg
     3721 tagcggctca actcggcggc gttccggatc gcctgcatct ggttctggat ccacatctgc
     3781 cgtacctgga tcaccttcgc gaaccagagc cggttcaccc ggagcgacgc cagcatcgcc
     3841 tcgagcagcg gggcctgccg gtcgagctgg cccttctcgg cccggaaccc gaaggcgcgg
     3901 tcgggtcccc accagacgta ctgcggagtg agcggcacct gggagtacac cagcaccacg
     3961 tagatgtcct cctcgagggc ccggccaccc tcctcgtatt caatccgggt gcgggcggcc
     4021 accacctgct tgacggcccc ggcctcctgc acgctcggcg cgacttcctg ggccagtttc
     4081 gggagcggct cggtccggat gactcgggga gacacccgtc cgcgcagctg tggcaggatc
     4141 aactgccgta cgaagttctc cgggtccatc ggctgggcca cgtaggagcc gagatagagg
     4201 ctgccgggcg ggaagccggg atagccctgc atgctccagg tgaacggggg tgtggggaag
     4261 aactcgaggc cggcgacacc gcgcggatcg ctcaggcgga gctggagata gaccagggtc
     4321 gagagctcgg agcgccacac caggccgcct tccgtgcgcc agtcatgcgg gacgagcagg
     4381 cggaacgcct cctcattgcc catcatggga tcgcgaactg gctgcatccg gagacggagg
     4441 gcgggtgatt gggccgcggc aggggcaagc gcgagcggga acagcagacc gagcaccagc
     4501 gggatgagac ggcgcatggc aacctccggt ccatgctacg ccgccggctg ttaatcgccg
     4561 gtgaaccgga cccgaagggt tccatatggg aggctcacgg cccccgccgg tagacccccg
     4621 tactcaggta cttgagtccc gaatccacca gcagcgtcac cacccgcgcc tgtggcccga
     4681 gttcccttcc ggccacgatc gcggccacca cgttggcccc tgacgatgtc cccgcgaaga
     4741 gtccctcctc ccgcgccagc ctgcgcgcca tcgcctccgc gtcggcggtc gtcaccggaa
     4801 tgatccgatg gggcagggcc ggatcccaca tcggcgggat atacccgatg ccgatcccct
     4861 cgatccgatg cgcgcccggc tgaccacccg agaggaccgc ggactctccc ggttccaccg
     4921 cgacgatcct gatgtcgggg taggcctggg tcaggacccg cgccgtccct ctcagggaag
     4981 ccgctgtgcc gatcgcctgc acgaacgcgg cgaccgggcc atcgctctgg gccacgatct
     5041 catggccgag tgtggcgtac ccggtgatgc tgtcggtgtt gcggagctga tcggtccaat
     5101 agctgtgcgg ctcctggctc atcgcccggg cggtgtcgat catcctgagg atgaggtcgc
     5161 gcgtgatctt cccgccctcg ctcgggagca ccgtgagctc ggcgccgaac gctgccatct
     5221 ggaccagctt ctcttcgctg aacgcgtcgg aggtgacgat gcgcagacga taccctttcg
     5281 cggcgcacac cagcgccagc gaggcgccgg tgctgccacc ggtgtattcg accaccgtgt
     5341 ggccgggctg gagccgccca tcggcttcgg cccccgcgat catggcctgg gccatccggt
     5401 ccttcatgct gccggtggga ttctgtcctt caactttgac gaagatccgg gcacagccct
     5461 ccggcaccac ccgcctgagt tcgaccaggg gagtattgcc gatggcgtcg aggacactgg
     5521 ttttcgcggg catggcgcgg ctccgtggca tgggcgtcca aggtagagcc tgccctgagg
     5581 cggggctatt ggcaagagcg ccatatctga tactttattt gccatgcgaa tcctcgtggt
     5641 tgccctggag ggcgcgttcg acaccggcct cgccgccctc ctcgatgcct ttggcaccgc
     5701 caacgagctg gccgagctcg gcgggatgtc ggtgtcgcgc ttcgaggtca cggtggtggg
     5761 gaccggccgg cgggtgacga cggcccaggg aatgacccgc tccacggtgc cgttcccgct
     5821 ccggcagact ccggattggg tggtggttcc cgcgatcagc gtgaagctgc cggctccgtt
     5881 ggtggcggcg ctcggagcac cgcaggtcgc ggcggccggc cgggcgctcc ggacctgggc
     5941 cacgcggggc gccgggattg ccgccgcctg catcggcacc ttcgtgctgg ccgagtcggg
     6001 gctcctcgac gagcatgaaa gcacgaccac ctggtggctg gcgccactct tccggcagcg
     6061 ctatccggcg gtgcagctcg acgagacccg catgatcgtc aagtcgggga aggtggtgac
     6121 ggccggcgcg gcgctgagcc acatggacct ggccctctgg ctcatccgcc agaagagccc
     6181 gcgcctcgcc gcccttaccg cgcgctacct gatcgtcgac agccggccta cccaatcggc
     6241 ctacgcgatg gtcgaccacc tggcccacaa cgatccgatg gtcgaacggt tcgagagctg
     6301 ggcccggagc cggctcaagc agggattttc gctcgacgat gcggcggtgg cagtgggcgc
     6361 gagcaagcga accctcgccc gccggcttgc gggcgtgttg gggcggacgc cgctctccta
     6421 cttccaggag ctgcgggtag agcgggcggt acatctgctc aggaccacgg acgagagcgt
     6481 cgatcagatc gccgcgcgcg tgggctacgc cgacggtgtg acgctgagga cgttgctgcg
     6541 gaagaagctg gggcggggag tgcgggagct gcggggcggg gtgggacggg gctagggctc
     6601 ggtcactgtg agcagggcgg cgaatccacc catgccgtcg ggcacccggg tcactccggc
     6661 aggcaccacc cagtcggtcc catcgaccag cagcacgaag tgatagaggc ccggcgccag
     6721 cctgagagtg ccggtccagg tgctgttgcc ctgatcggtc agcgggtgct gggtccagcc
     6781 atcccagtcg ccagcgaggg ccagggtcct cgcgcccggc atccggaaat ggaccagcac
     6841 gctgtcgccc tggcggagcg gcaccatcgg gctgtcacgc accaccgtgg tcaccggcgg
     6901 gatgcggcgg gcgctgtgga gccggacgcc ggcggagaga tacttcgccc cgatcaaccc
     6961 ctgataggga tcggggaggt aactcccgcc accgagctcg agggcgagcc ggggcagcac
     7021 gtaccacgcg atcgcaccgc cgcccgccgc gcggttggga taggtgccgc tcaggcgggc
     7081 cgagccccaa gccgaaagcg agacggggcc gcgatcgagt gacgcggcgg cagtcacatc
     7141 ggtgaaccac gcgccgagga agtgagtcgg ctcggcgctg agcgaccagc tgctccggcc
     7201 aagctggtac cacgcgcggg cgcgcccgtg gaacgcggtg accgacgact gatccttgat
     7261 ccacccgctg gatgcaccgg cggcgagtcc gatacctccc cgggggccgc tccagaacac
     7321 ttcgcccagc ccgtgggctg ccacggtcca agggccatcg gtgtaggtgg ttccggacgt
     7381 gttgccttcg gcgctggccc tgacggcgcc gaacaggggc ggactggcga gccagagtgt
     7441 cgcgcggccg acgctcgacc agcggttgtt ttccagcgtg ccgatgatcc cgcccatgtc
     7501 gaggtaggtg gaggggccgg tgaaacggaa ggccggggaa agtgaaccgg aagtcgagga
     7561 gccaccggag tagcgcacgg tgtttgcccc caccccgacg gagagatcgg tctgggcgct
     7621 cagcgctccg gcggtggcgg tgcagagaat gaggtagagc ggaagccgca tcgtgctgag
     7681 aatacgtcag cccgggcggt gggccaaggc tcgaaacgga atggcgcagg cacacccgct
     7741 ggtgcgcctg cgccacaggg attccgcagc gtggctacgg ccgatgaccg ccggaatgac
     7801 cgggagacgt cggctcgccg ggatgcggcg gaggtgcagg aggcgtcgta tgggtaggcg
     7861 ggacggccgg agtagccggt gtcgcaggca ccgccggtga tccgcctgca cccggcgtgg
     7921 ccggcgtggc gcccgaggag ggaacagcgg gagtggccgg agtgaccgga cgattcggcg
     7981 gcgtcacaac cgagccgcgg acctgggtcg catgcggcag cgatgcgagg cgaaccttgg
     8041 cggtatcgga cgcgtgctga ttgagccgcg gcgcaggaac ctgcgccagc gcgggtgtgg
     8101 caagcaccag cccggccaga gcgacgaggg cgaaatggat ggaacgtgtc atgcactgtc
     8161 tccggtatga attccacctg aagagcaggg cgtaagatgg gcagtaacgg cgtcattctg
     8221 tcccctgcgg gcgcgctgac acgccccgag acagctgacg atttatttga cagccccgac
     8281 gttactccgg ttcgaaccgc gggctcttca atagccatat ggccgggttc cccgtatggg
     8341 taagttgcac atcggcgcca caagctgagg aactcatttc gctggaacag gagaacgacg
     8401 ccgaggtgat ccgggcggtg ctcgccggcg aagtcgaacg gtatgcggtg ctggtacgcc
     8461 gctaccggcc gcgctatgcc tcctacgcgg cccgtgtggc aggatcgata gattccggcg
     8521 aagacgcgat gcaggaagcc ttcatccgcg cctacgaccg gctggcccag tgccgcgacc
     8581 cgcagaattt ccggggctgg ttcttcctga ttctccgcaa ctgctgcttt gcggaggccc
     8641 gggcccggcg ccggctggat gggctggacg atgccaccga ccggcccgag ctccagaccg
     8701 aggagcagag cagcgcggcg ctcgagggag aggaacagcg gcgtgagctc gaccgcgcga
     8761 tggccaggtt gacgccgatt cagcgcgaag tcttcgcgat gaagcacgtg gaaggactga
     8821 cgtacgaaca gatggctgag cggctccaga cgacggtggg atccctcaag atgcggatgc
     8881 accgcgccta cgaccgcctg cgggaagagc tgaaggggta cttatgaccg gttcgcgatc
     8941 gtaccacccg gaggtgaagc ggctgctcga cggcgagctg tcgctggccg acctcgcgcc
     9001 cgagctgcgg gccgaggggg aagaagcgtt gcgcctgctg ggccgggtcg accggacggt
     9061 cccgacgttt tcgccgtggt tcgagcagca ggtgatggcc gcggtccgcc gccggccgct
     9121 tccgatgcgg gcggggtggt gggcctggct caatgaatcg cgcccgcttc gctaccgccc
     9181 ccggctggca ctcgtcgccg ccgcgcttgg cgtgatggca ctgggcctcg cgctccgcgg
     9241 atctaccccc acaggggcac ccgtagcggc cgcccaggcc cagacctacg tgcgtttcgt
     9301 gctgtacgcc ccgactgccc atcgcgtgac cctggcgggg agcttcaacg gctgggacgc
     9361 ttcgcagacc ccgctggtgc cgaccgggac gagcggcctc tggaccgtga ccgtgccgct
     9421 ccccgcgggc aaccacctgt acgggttcat gctggatgac aaggaatggc tgccggatcc
     9481 cagcgcgccg gccgtggacg atggctttgg ccgccgcaac agcgtgctga ccgtcggtcc
     9541 ccaggaaatg gcccggtcat gaagaaggcg gcgatggtcg cattgctgct ggccggcgcg
     9601 catggcgcgg ccgcgcaggc cccggtgaca ctcgaaggcc gggtggcaca gccggtggcg
     9661 acccaggtcc aggccctggc cgactctctc gcacacgcgg gaatcccggg acagtcgctc
     9721 ctccgcaagg cccttgaagg gagcgccaag ggcgtgcctg acgagcggat cgtggcggcg
     9781 gtgcgggccg tcgcggggca gctggagcaa tccgccgcgg cgctggcgac cgctcggatc
     9841 ggcaccgact ctcaggctat cgaagcgggt gcctacgcca tcaacgcggg tctcaaggga
     9901 gaacaggtcg cggcgatcgc ccggtccagc cggcccccgt accagcccgc cgcgtccctg
     9961 caaagcgccg ggactctggt cgccatgggc gtgccggggt cgcaggcggt ttcgctgatt
    10021 caggattgga ttaccgcggg ccgttcaccc agcgaagtag cctcccttcc gtccaaggtg
    10081 caggccgcga tgtctccggg gctctccgcc tcgcaggcgg cccagaagat gtcgaagggc
    10141 ggcggtggcc gcggggctgc tcccaacccg ccggcgccga acccgcatgc gggcggcaat
    10201 ccaggcactc ctcctccgcg ccccgaccac cccgaccatc ccgatacgcc gcaccggccc
    10261 tgagccgggc ggctccgcct ctcgtcggtt tccgcagcac ccccaccagc tcatttgtat
    10321 actacggcca tgatcgtcca tctggtcgac ggcacgtacg agctgttccg ccacttctac
    10381 gggctgcgcc gcttcaacaa ggggaaggac aagcagtacg gcgctgtcgc cggcgtgctc
    10441 cactccatgc tcgagatgat cgagcagggc gccacccacc tcggcgtcgc caccgatcac
    10501 gtcatcgagt cgttccgcaa cgagctctgg ccgggctaca aaaccggcga cgggatcgag
    10561 ccggtgctcc gccgccagtt cgaaccactc gaggaagcgc tgcaggccat gggcgtggca
    10621 gtctggccca tggtggagct ggaggcggat gacgggctcg cttcggcggc ccacctcgcg
    10681 tcggcggact cccgggtgga gaaggtctgc atctgggcca acgacaagga tctcgcccag
    10741 tcggtgcggg gtgaccgggt ggtgcaggtg gaccggcggg gcaagcagat ccgtgacagc
    10801 gccgcagtga agcagaagtt cggggtgagc cccgagctga tcccggattt cctcgcgctg
    10861 gtgggcgacg cgcaggacgg gtacccgggc atccccggaa tcggccaggc taccgcggcg
    10921 cggctgctca atcgccacgg cccgatcgag gggtttccac ccaatctgct gggcgaggca
    10981 caagccgacg cgctcctctt caagcgcctg gcgacgctcc gcaccgatgc ggcgctcttc
    11041 gccgatgtcg acaccctacg ctgggccgga ccaaccgagg cgtttcccgc ctgggcggaa
    11101 cggatcggcg atgcacgtct gctggaacgg agccgcaaag ccgcggcggg cctgggagag
    11161 tgacaccgat gcggatcgcg atcttcggcg cgggcggggt gggcggatac ttcggcggcc
    11221 ggctggcgga ggcgggcgaa gacgtcacgt tcatcgcccg ggggaagcac ctcgaggcaa
    11281 tgcgcgagcg gggcctccgg gtcggcagca tcaaggggga cttccagatc cacccggtgc
    11341 gcgccaccga tgatcccgcc agcgtggccc cggtcgacgc ggtgctgctc tgtgtaaagg
    11401 cctggcagat ccgtgaagcc gcggaggcaa tgcgcccgct cgtcggcggg gaaaccctgg
    11461 tggtgccgct cgagaacggg gtggaggcgc cggatgagat cgccgaggtc ctgggagcgg
    11521 ggcacgcggc gggcgggctc tgccgcgtgc tcgcgtatat caccgggccg ggagagatcc
    11581 ggcactccgc catcgacccg tcgctttcct tcggtgagct ggacggcacg gtgactcggc
    11641 gggtggagca gctgcgcgat gcgttcgcgc gctgccgcgg tgtggcagtc gatgtgccac
    11701 ccgacatccg ggtcgccatg tggaccaagt tcctcttcat cgccccggtg agcggcatcg
    11761 gcgcggtcac tcgttcaccc attggtgtct tccgggaaat ccccgagacc aggcgcatgc
    11821 tggtggcagc gttcgaggag atcgttcagc tcgccgcgac gctcggagtc gggctccctt
    11881 ccgacgcggt gcagaagacg ctcgccttca ccgacgggat ccccgccgat ggaaccgcgt
    11941 cgatgcagcg ggacctgatg gaagggcgcc cttcggagct cgaggcccag gtcggcgcgg
    12001 tggtccggct ggccgaccgg gccggcatcg aagtcccggt acatcgattc ctctacgccg
    12061 cgctcctgcc gcaggagcgc cgggcccggg gcggcaggta gcgactgatc ttgatgctca
    12121 catcttgaca atcaagatga gcgagcgcta ctctggtgcc atgcccgagc attcgaccga
    12181 cgtgatccag ggcaccctgg acatgctcat cctcaagacg ctcagcctcc agccgctgca
    12241 cgggttcggt atcgcccgcc ggatcgagca gatctcccgc ggcaccttca aggtcaatcc
    12301 cggctcgctc ctgaccgcac tcaagcggct ggaacgggcc gggtggctcg acgccgaatg
    12361 gcgcgagacc gagaacgccc ggcgggcccg gatctaccgc ctcacccggg cgggccgccg
    12421 gcagctcgag gaggaaaccg agcaatggtc ccgcaaggtc tccgcgatcg cccgcctgct
    12481 cgaggccgag agctgaaatg catctctggc ggcaggtgac gcgcgggctc cggggcctct
    12541 tcctccccgc gcaggtccac cgggaaaccc gggaagaagt cgagcactac ctcgccgaat
    12601 ccgaggcggc tcatcgggct gccgggctct ccaccgatgc ggcccgacgc gcggcgctgc
    12661 tcgaagtcgg cggagtcgag caggtcaccg aggcggtgcg cgacaccggc tgggaggtct
    12721 ggttcgaggc cctctgggcc gacctgcggt acgccctccg gcggctccgc cacgagccgg
    12781 gcttcaccgc actcaccgcc ctcacgctcg ccctcggcat cggctccagc actgccatcc
    12841 tgggggcggt cattccggtg ctgttccggc
//
LOCUS       DATIFF010000775         2846 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2252288, whole genome shotgun sequence.
ACCESSION   DATIFF010000775 DATIFF010000000
VERSION     DATIFF010000775.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2846
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2252288"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..207
                     /locus_tag="VLD58_11320"
     CDS             <1..207
                     /locus_tag="VLD58_11320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54942.1"
                     /translation="NAERFLRSQGKARRGGVVRIVTGRGRGGRGAPIRTRIRTLLRGM
                     REGGGPVLDYFLEDSEGSFLIRLR"
     gene            complement(159..752)
                     /locus_tag="VLD58_11325"
     CDS             complement(159..752)
                     /locus_tag="VLD58_11325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54943.1"
                     /translation="MILAAPLALAALLAATAPGVAGSLMAQDTAALEFFGFRAGAPLS
                     ELEALARSHRGRLRCARSRTDPRVSECHGTVGSAALSGAARLWISAIDSVAAVITLSA
                     PVDSARLDRWRTTIERRYGRVTPRVQGSQQMLQWVRRRRMLRLTWRDEKQGVTASVSL
                     VDGRVLDRWGLVPRPGATTDRDQRSRIRKLPSESSRK"
     gene            complement(867..1067)
                     /locus_tag="VLD58_11330"
     CDS             complement(867..1067)
                     /locus_tag="VLD58_11330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002633565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HSB54944.1"
                     /translation="MAKGTVKWFNDAKGFGFIAQEGGKDVFVHHTAIVAEGFRSLAEG
                     DSVEFEVVEGPKGLQASNVRKV"
     gene            complement(1291..1812)
                     /locus_tag="VLD58_11335"
     CDS             complement(1291..1812)
                     /locus_tag="VLD58_11335"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: protein motif:HMM:TIGR00589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HSB54945.1"
                     /translation="MHVEWSSYNSPIGALTVVECEAGPLVVEFPNRALTIKWAVRLRA
                     AVPELHIAQGPCRVTSSWLDEYFAGSSRPFPYPEHLKRWFDLSPAQVGVFKTLRKIPL
                     GETRSYEDVARATGLHPRQIGWLVSANHLAILIPCHRVVGKDGGLVGYGGGLAKKRWL
                     LDHELRAAGVVLR"
     gene            1915..2526
                     /locus_tag="VLD58_11340"
     CDS             1915..2526
                     /locus_tag="VLD58_11340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54946.1"
                     /translation="MTSPQTLVVRSFTDRAEGLSHFVLRAGEAPRLLAFDDALGCPVE
                     TALAALEWTGAVGILLDDDLLHAARLTSETAAAVIERKGQDGRRFVYLGPRLDAPPMD
                     VFEGAVLFDEPGVKAVEFTHRAHALAHFLRATAGAGALLALLGRRAPELRHLRRWLGP
                     IIQELDMPRPLVAGWFAASSAGCLFAATELEPAYRYIEVGLES"
BASE COUNT          465 a          953 c         1010 g          418 t
ORIGIN      
        1 aacgccgagc gcttcctgcg gagtcagggg aaggcgcgtc gaggcggagt ggtgcggatc
       61 gtgaccgggc ggggaagagg cgggagaggt gcgccgatcc gcacccggat ccggacgctg
      121 cttcggggaa tgagggaagg gggcgggccg gtgctggatt actttctcga agattccgaa
      181 ggaagctttc tgatccggct gcgctgatcc cggtctgttg tcgcgccggg ccgcgggacc
      241 aggccccagc ggtcgagcac gcggccatcc accaggctca ccgaggcggt gacgccctgc
      301 ttctcgtcgc gccaggtgag ccggagcatc cggcggcgac ggacccactg aagcatctgc
      361 tgactgccct gcacccgcgg ggtcacccgg ccatagcgcc gctcgatggt ggtgcgccac
      421 cggtccaggc gggccgaatc caccggtgcc gagagggtga tcaccgcggc cacgctgtcg
      481 atcgcgctga tccagaggcg ggcggccccg gagagcgccg cggagccgac ggtgccatgg
      541 cactcgctca cccgagggtc ggtgcgggag cgggcgcagc ggagccggcc ccggtgagac
      601 cgagccagcg cctcgagctc cgagagcggc gctccggccc gaaacccgaa gaactcgagc
      661 gccgccgtat cctgggccat cagcgacccc gccacaccgg gagccgtggc cgcgagaagg
      721 gcggccaggg cgagcggcgc cgccaggatc atggccgtga cctcatgggt ggagggggag
      781 acgccgaggg cccgcgccgg atcggcgagg gccccggggt ggcgagccgt tcgtgtggtc
      841 ttaagaaagg cgcggagcgc cgggggtcag accttgcgga cgttggaggc ctggagcccc
      901 ttggggccct cgaccacctc gaattctacg ctgtcgccct cggcgagcga ccggaatccc
      961 tccgccacga tggcggtgtg atgaacgaat acgtccttcc cgccttcttg cgcgatgaag
     1021 ccgaacccct tcgcgtcatt gaaccacttg accgtgccct tcgccattgc cacaacctct
     1081 tgaaatggga gcccgcaggc cccggggaaa cccccagccc tcgtggccgg gtgaagaagc
     1141 cccaaaaaaa agcgccgttc ggatcgggtc cgagcggccg gcgttgactc aagaaagcaa
     1201 aggcgggacc gagctattca tggtctaagg tcatgcgcgg cccggaaatt gtcaatacgg
     1261 ccgggtgccg gtggaccggc cggttcgagg ctaccgcagc accaccccgg cggcccggag
     1321 ctcgtggtcc aacagccacc gcttcttggc cagtccccca ccatacccca ccaggccacc
     1381 gtccttgccc accacccgat ggcacgggat gagaatggcc aggtggtttg ccgacaccag
     1441 ccagccgatc tgccggggat gcagcccggt ggcgcgggcg acgtcctcgt acgaccgggt
     1501 ttctcccagg gggatcttgc gaagggtctt gaatacgccc acttgggcgg gggagaggtc
     1561 gaaccagcgc ttcaggtgct cgggataggg gaaggggcgg gaagagccgg cgaagtattc
     1621 gtcgagccac gaggaggtga cccgacacgg tccctgggcg atgtgcagct cggggaccgc
     1681 cgcgcggagt cggacggccc acttgatcgt gagcgcccgg ttggggaact ccacgaccag
     1741 cgggcccgcc tcacactcga cgacggtcaa cgccccgatg ggcgagttgt aggacgacca
     1801 ctccacgtgc attccggggc gctcccgggg ggtgacccgg gaaaggtatc ccgggagcgg
     1861 cgcacgagcc atccacgtcc tgtcccttgg ccgggagggc cgtatattcc cctcatgaca
     1921 tccccgcaaa cgctggtggt ccggagcttc accgaccggg ccgaaggcct gtcccacttc
     1981 gtcctccggg ccggcgaagc gcccaggctg ctcgccttcg acgatgcgct cggctgcccg
     2041 gtggagaccg cgctcgcggc gttggagtgg accggcgcgg tgggcatcct cctggacgac
     2101 gacctgctgc acgcggcccg gctcaccagc gagacggccg cggcggtgat cgagcggaag
     2161 ggccaggatg gccggcggtt cgtgtatctc ggcccccggc tcgacgcccc gccgatggac
     2221 gtgttcgagg gggcggtgct cttcgacgag cccggcgtga aggcggtcga gttcacccat
     2281 cgcgcccacg ccctggccca cttcctccgg gccaccgccg gtgccggcgc cttgctggcc
     2341 ctcctgggcc ggcgcgcgcc cgagctcagg cacctgcgcc gctggctcgg gccgatcatt
     2401 caggagctcg acatgccccg gcctctggtc gccggctggt tcgccgccag ctcggcgggc
     2461 tgcctctttg ccgcgaccga gctggagccg gcctaccgct acatcgaggt cgggctggag
     2521 agctaagccg cgagttggtg gtggagacgt tgatacacat gtccacaatt gtgtggaccg
     2581 aatcggtagc gcgatggctc cgcagtgttt agaaatccac aatccggccg ccgttcggtg
     2641 gcgtaacccg aataaaatca ggcacttgcg cgattgggca ggcgccctat cttagtctcc
     2701 acgcgcccgc aggaaacgta ctgagacccc gagtcacagt ggcgaccagc aggcgggttc
     2761 gagcgggata tcaggggaga gtgccgacgc aaccaagggc tcaggcattc gttgatcctg
     2821 gtgatcaccc cggctcgaac aggtga
//
LOCUS       DATIFF010000776         1625 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_99183, whole genome shotgun sequence.
ACCESSION   DATIFF010000776 DATIFF010000000
VERSION     DATIFF010000776.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1625
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99183"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..702
                     /locus_tag="VLD58_11345"
     CDS             <1..702
                     /locus_tag="VLD58_11345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54947.1"
                     /translation="GPPMFVVSLRLRERYANGLPIRLPLGTRAEITTTGLIGSASISL
                     IVPVNQIQAALQPGDTIKGSLTQGWTDVVKEVADTLRTQVSGILSDTRTLLGSLNRTA
                     RATEDEVHRTAPEIRQTLASARAALDRLEPLLARATTTLANADSNFAGIHDSLTVLMA
                     DTRQLINHADTLTRNISDLTGDVGPDVRQTLKTMRVVSAKFEYFIDQVSRRPHRLLTG
                     VHQISRDSLLEQTGP"
     gene            699..>1625
                     /locus_tag="VLD58_11350"
     CDS             699..>1625
                     /locus_tag="VLD58_11350"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSB54948.1"
                     /translation="MKYLLYHSPGWSPGPIAEVLAAEQVKLEAVESADRIRPDHHPTA
                     YLLDGQARVGAGRETLARLKEAGVALVALGLPGELDVPADLPSDLLSGFLQSTAGPRQ
                     LLVGLRAAFQVSASALEHRRAREESAARLNELTELADIGVQLTTEKNLETLLDLILTQ
                     ARRVTHSDAGSLYIAETSPAGERRLCFKLSQNFSRPDIPFVEFSIPIDHASLAGYAAT
                     EGSPLVIEDVYTLPPEVQYSFNRSFDERYGYRTKSMLVIPMQNHHGEVIGVLQLINRK
                     RDPEAKLGDRDAEDQIIPFSAHTVKIVNALASQ"
BASE COUNT          281 a          601 c          498 g          245 t
ORIGIN      
        1 ggcccgccga tgttcgtcgt gagcctccgg ctccgcgagc gctacgccaa cggactcccc
       61 attcgcctgc ccctcggcac ccgggcggag atcaccacga ccggactcat cggtagcgcg
      121 tcgatttccc tgattgtgcc ggtgaaccag atccaggcgg ccctccagcc gggcgatacc
      181 atcaagggca gcctgacgca gggatggacc gacgtcgtca aggaagtggc cgacaccctc
      241 cgcacccagg tctccggcat cctgagcgac acccgcaccc tgctcggcag cctcaaccgc
      301 accgcccggg caaccgagga cgaggtgcac cgcaccgcgc ccgagatccg gcagacgctg
      361 gccagcgccc gggccgcgct cgaccggctg gagccactcc tggcccgtgc gacgaccacc
      421 ctcgccaacg ccgacagcaa cttcgccggg atccatgact cgctcacggt gctgatggcg
      481 gacacccggc aactgatcaa tcacgccgat accctgacgc ggaacatcag cgatctcacc
      541 ggcgatgttg gccccgatgt gcgccagacg ctcaagacca tgcgggtggt gagcgccaaa
      601 ttcgagtact tcatcgacca ggtgagccgc cgtccccatc gtctcctcac cggcgtacac
      661 cagatctcgc gcgactcgct gctggaacag accgggccgt gaagtacctc ctgtaccatt
      721 ctcccggctg gtcgccgggc ccgatcgccg aggtgctcgc cgcggagcag gtaaagctcg
      781 aagcggtcga gtcggccgac cggatccggc cggatcatca cccgaccgcg tatctgctcg
      841 acggccaggc ccgggtcggg gccggtcgcg agacgctcgc ccggctcaag gaggcaggag
      901 tcgcgctcgt cgcactcggc cttcccgggg agctggatgt tccggccgac ctcccctcgg
      961 acctgctgag cggcttcctg cagtcgaccg ctgggcctcg ccagctcctc gtgggcctcc
     1021 gcgccgcctt ccaggtctcc gcctcggccc tcgagcaccg ccgggcccgg gaagagagcg
     1081 ccgcgcgcct caacgagctg accgagctcg cggatatcgg ggtccagctc accactgaga
     1141 agaacctcga gaccctgctc gacctgatcc tcacgcaggc gcggcgggtc acccactcgg
     1201 atgccggcag cctctacatc gcggaaacca gcccggccgg ggagcggcgg ctctgcttca
     1261 agctgagcca gaacttcagc cggccggaca ttccgttcgt cgagttcagc atcccgatcg
     1321 accacgcctc cctggccggc tacgctgcca ccgagggatc gccgctggtg atcgaggacg
     1381 tgtacaccct gccgcccgag gtgcagtact cgttcaatcg ttcgtttgat gagcggtacg
     1441 gctaccgtac caagagcatg ctggtgattc cgatgcagaa tcatcacggc gaggtgatcg
     1501 gggtgctcca gctgatcaac cggaagcgcg atcccgaggc gaagctgggc gaccgcgacg
     1561 ctgaagatca gatcattccg ttcagcgccc acacggtgaa gatcgtcaat gccctcgcct
     1621 cccag
//
LOCUS       DATIFF010000777         3166 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1329873, whole genome shotgun sequence.
ACCESSION   DATIFF010000777 DATIFF010000000
VERSION     DATIFF010000777.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3166
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1329873"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..545
                     /locus_tag="VLD58_11355"
     CDS             <1..545
                     /locus_tag="VLD58_11355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSB54949.1"
                     /translation="HWKVGRGDNVGIVGLGGLGHMALKFAKAFGAHPVLFTTSPGKEQ
                     DARRLGAEDVVVTRNADELKRHAGRLDFIIDTVAAPHDLSAYLQLLRRDGTLCLVGVP
                     DRPHPSPNVAALIFRRRSLGGSLIGGIQETQEMLDFCAEHGIVSDVELIPIQKINEAY
                     ERMLKSDVKYRFVIDLGSLK"
     gene            complement(637..2184)
                     /locus_tag="VLD58_11360"
     CDS             complement(637..2184)
                     /locus_tag="VLD58_11360"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HSB54950.1"
                     /translation="MDLGRLGRALGTSLVLGTALSGRQIASWSTPRNRWDYFWQRQDA
                     VDLLVSVLLLSAVVFIVGLVLSRWEWSRSRRLHELGLVVAILSAILSQFPALNKETTL
                     LRASLLWIGAVVLIALVWRRWSDRLARGARAICLIMLPLVPILFLQILSWKPWDVREA
                     STREVPAPASGTGRPLVVFVIFDEWSWFRFAPDGVPAAEFPNARRLAERSVLVREARS
                     AGPATRYAIPRLFFERYGEIVPGNGEAKWEDTTGTRPTVDVPSIFDKVHQFGYRSSVL
                     GFYINYRSLVGPDAPDYVWSLSYVYKRTTRLEEIGLMLMRNLQHWTDPLSQAVWQPLS
                     TAVYSDSWVELLRSMRESALNSLVKEPDNTFLVLHLPLPHAPFVFNADGSFRGRYKGT
                     RLSEDTAGYNRHLRYTDRVLGEIMDTLERAGRFDQSLIVVTSDHSWRREPDSALVKLP
                     DAGLRVPLLVKWPGQKAAMVSDSTFCAMGLWPVIEAAIAPATPPVMSDSLWREISAAG
                     RRVKCRL"
     gene            complement(2184..>3166)
                     /locus_tag="VLD58_11365"
     CDS             complement(2184..>3166)
                     /locus_tag="VLD58_11365"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSB54951.1"
                     /translation="LDIWKALGQFNQMFTFPLLLNREQGWDLRSFFLGSLGGRTLEEV
                     AKAFGPVARWRPSLLLDLTLPLLLGRRVEKQAPEESRKTAAPRPGGSPDAQRANLGRL
                     RSKVRGLAEGYRPSGVWADYTATCTYDSAASAAKRELIRKYIEKASPAQVLDLGCNTG
                     EYSYLAAAAGAQVIAVDQDHDAIEMLYRRLRKDKAAISPMVADLSNPSPGIGFRNAER
                     DPLLARVESDLVLALALLHHLLVSANLSLESARDLLFDLTREHLVLEFVPTDDPMFRR
                     LLRFRSDDFSWLTLDSCRSVLAQRFTVLDEQPVPGTPRTMFFLQKRTGAA"
BASE COUNT          546 a         1073 c         1055 g          492 t
ORIGIN      
        1 ggcactggaa ggtggggagg ggcgacaacg tcggcattgt cggactgggt ggcctgggtc
       61 acatggcgct caagttcgcc aaggcgttcg gcgcccaccc ggtgctcttc accacctcgc
      121 ccggcaagga gcaggatgcc cggcgcctcg gcgccgaaga tgtggtggtg acccggaatg
      181 cggatgagct caaacggcac gccggccggc tcgacttcat catcgacacc gtcgcggccc
      241 cgcacgatct cagcgcctat ctgcaactcc tgagacgcga tgggacgctc tgcctggtgg
      301 gcgtgccgga tcggccgcat ccgtcgccca acgtggccgc cttgatcttc cgccgccgct
      361 cgctcggcgg atcgttgatc ggtggcattc aggagaccca ggagatgctc gacttctgcg
      421 ccgagcacgg gatcgtctcc gatgtcgagc tgatcccgat tcagaagatc aacgaggcct
      481 acgagcggat gctcaagagc gacgtgaagt accgcttcgt gattgatctg gggtcgttga
      541 aatagaggtc atgggtcaag ggtcaagggt cacgggtcga gcaaatagtc cttgacccgt
      601 gacccttgac cccagacccc taaacctctc gacccactac agccgacact tcaccctcct
      661 gcccgcagct gaaatctccc gccacagcga atcgctcatc actggcggtg tcgccggcgc
      721 gatggccgct tcgatcacag gccacaatcc catcgcgcag aaggtgctgt cgctcaccat
      781 cgcggccttc tggcccggcc acttcaccag cagtggcacc cggagcccgg cgtcgggcag
      841 cttgaccagc gcgctgtccg gttcccgccg ccaggagtgg tccgaggtta ccactatcag
      901 gctctggtcg aagcgtcccg cccgctccag cgtgtccatg atctcgccca gcacccggtc
      961 ggtgtaccgc aggtgacggt tgtatcccgc ggtgtcctcg gagagccggg tgcccttgta
     1021 gcgtccgcgg aaggagccgt ccgcgttgaa gacaaagggc gcgtgaggca gcgggaggtg
     1081 cagcaccagg aaggtgttgt ccggctcctt gaccagggaa ttgagcgcgc tctcccgcat
     1141 cgagcggagg agttcgaccc agctgtcgct gtagaccgcg gtcgagagcg gctgccacac
     1201 cgcctggctc agcggatcgg tccagtgctg gagattccgc atcagcatca ggccgatctc
     1261 ttccagccgg gtggtccgct tgtagacgta cgacaggctc cagacgtaat ccggcgcgtc
     1321 cggtcccacc agactccggt agttgatgta gaagccgagc accgaggagc ggtagccgaa
     1381 ctggtgcacc ttgtcgaaga tcgagggcac gtccaccgtc ggccgggtac cggttgtgtc
     1441 ctcccatttc gcttcgccgt tgccgggcac gatctcgccg taccgctcga agaagagccg
     1501 cggaatcgca tagcgcgtcg ccggccccgc cgaccgcgcc tcccgcacca gcaccgaccg
     1561 ctccgccagc cggcgggcgt tggggaactc cgccgccggg acgccatcag gggcaaagcg
     1621 gaaccacgac cactcgtcga agatcacgaa gaccacgagc ggacgcccgg tgccgctggc
     1681 cggcgccggc acctcgcggg tgctcgcctc ccgtacatcc cagggcttcc agctgaggat
     1741 ctggaggaag aggattggga ccagcggcag catgatgagg cagatggccc gcgctccccg
     1801 agccagccgg tcgctccacc gccgccagac cagggcgatg aggacgactg ctccgatcca
     1861 gagcaggctg gcccggagga gggtggtctc cttgttgagg gcgggaaact gcgagaggat
     1921 cgcgctcagg atggcgacga cgagaccgag ctcatgcagc cgccgcgaac ggctccactc
     1981 ccagcgcgag agcacgagtc cgacgatgaa caccaccgcg ctgagcagca ggaccgacac
     2041 gagcaggtcg acggcgtcct gccgctgcca gaagtagtcc cagcggttcc gcggcgtgct
     2101 ccacgaggcg atctgccggc ccgacagcgc ggtcccgagc accagcgagg ttccgagtgc
     2161 ccggcccagt cgccccaggt ccatcaggcg gccccagtgc gcttctggag aaagaacatg
     2221 gtgcgtggcg tgcccggcac cggctgctcg tccagcaccg taaagcgctg ggccagcacg
     2281 ctgcggcagg aatcgagcgt gagccagctg aagtcgtccg agcggaaccg gagcagccgt
     2341 cggaacatcg gatcgtcggt cggcacgaac tcgagcacca ggtgctcccg tgtcagatcg
     2401 aagagcaggt cgcgggccga ctcgagtgag agattggcgc tgaccagaag gtgatgcagc
     2461 agcgccaacg ccagcaccag gtccgattcc acccgtgcca gcagcggatc ccgctcggcg
     2521 ttccggaagc cgatccccgg gctggggttg gagaggtcgg cgaccatcgg cgagatcgct
     2581 gccttgtcct tgcggaggcg gcggtagagc atctcgatcg catcgtgatc ctggtccacc
     2641 gcgatcacct gcgctcccgc cgccgcggcg agatagctgt actcgccggt gttgcagccg
     2701 aggtcgagca cctgcgcggg gctggccttc tcgatgtact tcctgatgag ctcgcgcttg
     2761 gcggccgagg cggccgagtc gtaggtgcag gtggcggtgt agtcggccca gacacccgat
     2821 ggccggtatc cctcggcgag accgcggacc ttgctccgga gccggccgag attggcccgc
     2881 tgcgcgtcgg gagatccgcc cggccggggc gcggcggtct tgcggctctc ctccggcgcc
     2941 tgcttctcca cccgccgtcc cagcaacagc ggcagggtga gatcgagcag gaggctcggc
     3001 cgccagcgcg ccaccgggcc gaacgccttc gccacctctt ccagcgttct gccgccgagg
     3061 ctgccgagaa agaacgagcg caggtcccac ccctgctccc ggttgagcag cagtgggaag
     3121 gtgaacatct ggttgaactg gcccagcgcc ttccagatat cgagcc
//
LOCUS       DATIFF010000778         1004 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1022939, whole genome shotgun sequence.
ACCESSION   DATIFF010000778 DATIFF010000000
VERSION     DATIFF010000778.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1022939"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1004)
                     /locus_tag="VLD58_11370"
     CDS             complement(<1..>1004)
                     /locus_tag="VLD58_11370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54952.1"
                     /translation="LAGPLRAQVTADAPAGLPAAVIDLGSSEGARLVGGEWRTRVVHL
                     VEVDHRAPGSDLRPSGAPIRTLDIDAHAGPADFDDSQWERIPAESLEARRGNGRVSFV
                     WYRMPVTIPARVGKLDPAGMTVVLELVADDYSEIWVNGQLPVVLGQVGGPLVRGFNAP
                     NRVVLTRDARPGQRFQLAVMVANGPFSNPPPNFIWVRSATLDFFAPEQARVAQATDGS
                     VMRLDPALDALVAPGAKIEKLAGGFRFLEGPVWVRDGGYLLFSDPNANNVYRWTPNGE
                     VSIYRTKSGYAGVDIGEYHQPGSNGLALDRDGRVTIDQHGNRRVIRVERTGAVTVLAD
                     "
BASE COUNT          159 a          347 c          354 g          144 t
ORIGIN      
        1 atcggccagc accgtcactg ccccggtccg ctctacccgg atcacgcggc ggttgccatg
       61 ctgatcgatc gtcaccctgc cgtccctgtc gagcgccagc ccgttggatc cgggctgatg
      121 atactcgccg atgtccaccc cggcataacc gctcttggtc cggtagatcg agacctcccc
      181 gttgggggtc cagcgataga cgttgttggc gttcggatcg ctgaagagca gatagccgcc
      241 gtcccggacc cagacggggc cctcgaggaa gcggaagccg cccgccagtt tctcgatctt
      301 cgccccgggg gcgaccaggg catcgagcgc gggatcgagc cgcatcacgc tgccatcggt
      361 cgcctgtgcg acgcgggcct gctccggcgc aaagaagtcc agcgtggcgg accggaccca
      421 gatgaagttg ggggggggat tggagaacgg cccgttggcg accatcacgg cgagctggaa
      481 cctctgtccc ggccgggcat cgcgggtgag cacaacgcga ttcggcgcat tgaacccacg
      541 caccagaggg ccgccaacct gccccaggac gaccgggagc tggccgttga cccagatctc
      601 ggagtagtca tcggccacca gctccagcac gacggtcatt cccgcgggat cgagcttccc
      661 cacgcgagcc ggaatggtga ccggcatgcg gtaccagacg aaggaaaccc gtccgttgcc
      721 gcggcgggcc tcgaggctct cggccgggat ccgctcccat tggctgtcgt cgaagtctgc
      781 cggccccgcg tgggcgtcga tgtccagagt gcggatgggg gcgccggagg gccggagatc
      841 ggaccccggg gcccggtgat ccacctcgac gaggtgaact acccgggtgc gccactcgcc
      901 accgaccagc cgcgcgccct ccgagctgcc gaggtcgatg acggcggcgg ggaggcctgc
      961 gggcgcatcg gccgtgacct gcgcgcggag cgggccggcg aggg
//
LOCUS       DATIFF010000779         2250 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1790870, whole genome shotgun sequence.
ACCESSION   DATIFF010000779 DATIFF010000000
VERSION     DATIFF010000779.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2250
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1790870"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            144..1274
                     /locus_tag="VLD58_11375"
     CDS             144..1274
                     /locus_tag="VLD58_11375"
                     /inference="COORDINATES: protein motif:HMM:NF014090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT1/CCC1 family protein"
                     /protein_id="HSB54953.1"
                     /translation="MSEPADIARYQANLQDETDSAFLYRSFAAAEKQPQIAEVFRRLA
                     EVEEKHARFWGEQLRQAGAAVPGLKPGWRPRVLARLAKTFGVEMILPTVSGLEKGGSA
                     SYRRQPETSATAMPAEEQSHDRVLRSILKTAPGGVEGSWIARFEGRHRAIGGNALRAA
                     VLGANDGLLSNMSLVMGVAGADLAGRSILITGFAGLLAGSISMALGEWISVQSSRELY
                     QRQIAIESGELKAHPQEEMEELALIYQSKGVAPDQAKALSERLLQDPTQALDTLAREE
                     LGIDPEALGGSAWEAAISSFFLFAVGAIIPVLPFFFLSGKAGIAASLAASALGLFGIG
                     AAITLMTGRSVLVSGGRQILFGLIAAAVTFGVGKLMGVGLGG"
     gene            complement(1439..1975)
                     /locus_tag="VLD58_11380"
     CDS             complement(1439..1975)
                     /locus_tag="VLD58_11380"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HSB54954.1"
                     /translation="MKTRALPLMAAFCLMVPLAGCNRDTNPVHAERDAQGNTHVTVDN
                     QQVDRNVDRANQDMKNAGEQIKEGANKAGAAIERGANKVGNQIETKVVPAAKEALSNA
                     SITARVKSRLAQDPAINALYVNVDTNDGQVTLSGKVALPEQKAEAEQVARETDGVKAV
                     VNQLQVTGNVPAAPPSGS"
BASE COUNT          305 a          781 c          779 g          385 t
ORIGIN      
        1 gggaccggtg tgcgccgtcg ccccgccatg tcctcggacc gcccgggcat ccatccccgg
       61 gtggaccgcg ctccggtccc ggaaaacacc gctacaatcc cccacgagag ctccagttac
      121 cgatcccggc gggaggagag acgatgagcg agccggcgga catcgcgcgc taccaggcca
      181 atctccagga cgagaccgac agcgccttcc tctacaggtc gttcgcggcg gccgagaagc
      241 agccgcagat cgccgaggtg ttccggcggc tggccgaggt cgaggagaag cacgcccgct
      301 tctgggggga gcagctccgc caggccgggg ccgccgtgcc cggtctcaag ccgggatggc
      361 ggccgcgcgt gctcgcccgg ctcgcgaaga cgttcggcgt cgagatgatc ctccccaccg
      421 tgtcgggcct ggaaaaggga gggagcgcca gctaccggcg gcagcccgag acgagcgcca
      481 ccgcgatgcc ggccgaggag cagtcgcacg accgggtgct gcgctcgatc ctcaagaccg
      541 cgcccggcgg cgtcgagggg tcgtggatcg cccgcttcga ggggcggcac cgggcgatcg
      601 gcggcaatgc cctgcgcgcc gccgtgctcg gcgccaacga cggcctgctg tcgaacatga
      661 gcctggtgat gggggtggcg ggggcggatc tggccggacg gtcgatcctg atcaccggct
      721 tcgccggcct gctcgcggga tcgatctcca tggcgctcgg cgagtggatc tcggtgcaga
      781 gctcccgcga gctgtaccag cggcagatcg ccatcgaatc gggggagctc aaggcgcatc
      841 cgcaagagga gatggaggag ctggcgctga tctaccagtc caagggggtg gcgccggatc
      901 aggcgaaggc gctctccgag cggctgctcc aggaccccac gcaggcgctc gacacgctgg
      961 cccgcgagga gctggggatc gatccggagg cgctcggggg ctcggcgtgg gaggcggcga
     1021 tctcctcgtt cttcctcttc gccgtgggcg cgatcatccc cgtcctcccc ttcttcttcc
     1081 tctccggcaa ggccggcatc gccgccagcc tcgccgcctc cgcgctcggc ctcttcggca
     1141 tcggcgcggc catcaccctg atgaccggcc gcagcgtgct ggtctccggc ggccgccaga
     1201 tcctcttcgg cctgatcgcc gccgcggtca ccttcggcgt cggcaagctg atgggggtgg
     1261 ggctgggggg atagcccggg cacgaatgcc acaccgttac acacatcttt gaccgccctg
     1321 gaggggcgga tattcaccag cctggggttt caaccccagg tgtgggggtg gtggccgcgg
     1381 cccccgcctg gggttgaaac cccaggctct tcaatacccg cccttccagg gcggccccct
     1441 acgagcccga cggcggcgcc gccgggacgt tgccggtcac ctggagctga ttcacaacgg
     1501 ccttcacccc atctgtctcg cgggcgacct gctcggcctc ggccttctgc tccggcagcg
     1561 cgaccttgcc gctcagggtg acctggccgt cgttcgtatc cacgttgacg tagagggcgt
     1621 tgatcgccgg gtcctgcgcc agccggctct tcaccctggc ggtgatgctg gcgttgctca
     1681 gggcctcctt ggccgcgggg acgactttgg tctcgatctg attcccgacc ttgttcgcgc
     1741 cgcgctcgat ggcggctccg gccttgttgg ccccttcttt gatctgctcg ccggcgttct
     1801 tcatgtcctg gttggcccgg tcgacgttcc ggtcgacctg ctggttgtcg acggtgacgt
     1861 gggtattacc ctgggcgtct ctttccgcgt ggaccgggtt cgtatcgcga ttgcagccgg
     1921 ccagtgggac catcaggcag aaggccgcca tgagcggaag ggctcgcgtc ttcatgattt
     1981 gcctcctttc gggcaaaaaa aggggggagg cgggctggtc tgtggactca ggacgcctcc
     2041 ccttcaggga ggggccgcga aaggctgttt cgcgccggtg ctgcgtttac gactctccgg
     2101 ggagctaccc ccgggctgct gccggctcac cgtgccaccg gcctgcgata gaggtaattt
     2161 gcaggttttg tgccagagga ttgccgaacc ctcacccctg gcccctctcc cgacccctcc
     2221 cgccctccct caccgggaga ggggaaaccg
//
LOCUS       DATIFF010000780         1379 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2099464, whole genome shotgun sequence.
ACCESSION   DATIFF010000780 DATIFF010000000
VERSION     DATIFF010000780.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1379
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2099464"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..528
                     /locus_tag="VLD58_11385"
     CDS             <1..528
                     /locus_tag="VLD58_11385"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB54955.1"
                     /translation="DVGIVHRDLKPENIIYDSGSGVTKLLDFGIARDAELPPEERLTR
                     TGFFVGTLQYVAPEALSGELVDARADIYSLATIAYYMLSGRHPFSGRNPRELFQQLLR
                     EAPLPLNEALPGRRFPAALEAAVMRGLSRDPGQRQPSVTTFAGEFASAAAGTTEAPES
                     GLLGTLRRFMGGKKE"
     gene            534..1106
                     /gene="pyrE"
                     /locus_tag="VLD58_11390"
     CDS             534..1106
                     /gene="pyrE"
                     /locus_tag="VLD58_11390"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HSB54956.1"
                     /translation="MSATTPSDHASTIVRLTELLRQRSLTHGDFVLASGRRSTFYIDA
                     RQTTMSGEGQVLIGAAGLAALQSRSWRPRSVGGLTLGADPVAYAIAHAARLAGTAIDA
                     FTVRKQVKDHGTARRIEGCLEAGDAVVVIEDVITTGRSALDAVVAAREEGANVLGVLA
                     VIDRQEGGREAIEAAGLTVAALVTARDLGV"
     gene            1106..>1379
                     /locus_tag="VLD58_11395"
     CDS             1106..>1379
                     /locus_tag="VLD58_11395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54957.1"
                     /translation="MTTPAVSDALLVVLQLSDSFNEYWPLLARELGVPLLVRDPTADP
                     EALPTHALAVVVAAGGAETDVGPLLGRIGLPASTPLVVAGASTSHRI"
BASE COUNT          207 a          496 c          467 g          209 t
ORIGIN      
        1 gacgtcggga tcgttcaccg cgacctgaaa cccgagaaca tcatttacga ttccggcagc
       61 ggggtgacga agctgctgga cttcggcatc gcgcgcgacg cggagctgcc tcccgaggaa
      121 cgcctgaccc gcaccgggtt cttcgtcggg accctgcaat acgtggcgcc cgaagcgttg
      181 tcgggggagc tggtggacgc gcgggccgac atctacagcc tggcgacgat cgcctactac
      241 atgctctcgg gtcggcaccc cttcagcgga cgcaacccgc gggagctgtt ccagcagcta
      301 ctgcgagagg ctcccttgcc gctcaacgag gcactgccgg gccggcgctt cccggccgcc
      361 ctcgaggcgg ccgtcatgcg ggggctgagc cgcgatcccg ggcagcgcca acccagcgta
      421 acgaccttcg cgggagagtt cgccagcgcc gcggcgggta caacggaggc gccggagtcc
      481 ggcttgctgg ggacgctgcg ccgctttatg ggtggcaaga aggaatagta gtagtgagtg
      541 caactacgcc atcggatcac gcgagtacga tcgtccgact caccgagctg ctgcggcaac
      601 gatccctgac gcacggggac ttcgtgctcg cctcgggccg tcgctcgacc ttctacatcg
      661 atgcccgcca gaccaccatg tcgggcgagg ggcaggtact gatcggcgcc gcgggcctgg
      721 ccgcgctcca gtcccgtagc tggcgcccca ggtccgtcgg gggcctcacc ctgggcgcgg
      781 atcccgtggc ctatgccatc gcccacgccg cccggctcgc cggcaccgcc atcgatgcct
      841 tcacggtgcg caaacaggtg aaggaccacg gcaccgcccg ccgcatcgag gggtgcctcg
      901 aggcaggtga tgcggtggtc gtcatcgagg acgtgatcac cacgggccgg tccgcgctcg
      961 acgcggtggt ggccgcacga gaggaaggcg cgaacgtact cggcgtactc gccgtcatcg
     1021 atcgccagga aggcggccgc gaagccatcg aagccgccgg gctcacggtc gccgccctgg
     1081 taaccgcccg ggacctcggg gtgtagtgac gacgccggcc gtttccgacg ccctcctcgt
     1141 cgttcttcag ctgagcgact cgttcaacga gtactggccc ttgctggccc gggagctcgg
     1201 cgtccccctc ctcgtccgcg accccaccgc cgaccccgag gcccttccga ctcacgcact
     1261 ggcggtggta gtcgccgccg gtggggcgga aacggacgtc ggccccctgc tcgggcgcat
     1321 cggtcttccc gcgtccaccc ccctggtggt cgcgggagcc agcacctcgc atcggatcg
//
LOCUS       DATIFF010000781         1073 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1177131, whole genome shotgun sequence.
ACCESSION   DATIFF010000781 DATIFF010000000
VERSION     DATIFF010000781.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1073
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1177131"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..706)
                     /locus_tag="VLD58_11400"
     CDS             complement(<1..706)
                     /locus_tag="VLD58_11400"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015022.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0030259 - lipid glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB54958.1"
                     /translation="MYITILTTGSRGDIQPFVALGSGLQSAGHQVRIATHEPYRELVQ
                     SRGLGFGPVGGDARELLESGEGRRLLDSGGNPFTVFRELARMAEPLAVRAMRDAYEAT
                     RDSDLLITGTATFFGGEALAEATGIPLVYGGLGPMAPTQQACSMLFPALPSALGWAGP
                     LGYHWLSHQLTLLAFTGLMRSPINRARETVLGLPPRGWTISPRRFRDGPLFLYGYSQA
                     VLPRPTDWSSTQQVTGY"
BASE COUNT          187 a          375 c          367 g          144 t
ORIGIN      
        1 agtagcccgt cacctgctgt gtcgagctcc agtcggtcgg gcggggcagc accgcctggc
       61 tgtagccata gagaaacagc gggccgtccc ggaagcggcg cggcgatatg gtccatccgc
      121 gcggggggag gccgagcacc gtctcgcggg cgcgattgat tggcgagcgc atcagcccgg
      181 tgaaggccag gagggtcaac tggtggctca accagtggta ccccaggggg ccggcccacc
      241 cgagcgccga tgggagcgcc ggaaaaagca tgctgcacgc ctgctgggtc ggcgccatcg
      301 gaccgaggcc gccgtacacc agaggaatgc cggtcgcttc cgccagcgcc tcaccgccga
      361 agaacgtcgc ggtgccggtg atcagcagat cggaatcccg ggtcgcctcg tacgcatcgc
      421 gcattgcgcg gacggcgagc ggttcggcca tgcgggccag ctcgcggaag acggtgaacg
      481 ggttgccgcc cgaatccagc aacctccgac cctccccact ctccagcagc tcgcgggcgt
      541 caccccctac cgggccgaac ccgagcccac ggctctggac cagctcgcga tagggctcgt
      601 gggtggcaat gcgcacctgg tgccctgcgc tctgcagacc cgagcccagc gccacgaaag
      661 gctgaatgtc gccgcgagaa ccggtggtga gaatcgtgat gtacatgctg accctctccc
      721 tcaatggacg gagcagagac ggggagacct cgaaccggag tccgccccgc cggaacggaa
      781 cgcggcaaag ctacgggccg gcgccacgcc ggaatcacct cggagtcacc cggccgaaac
      841 tgcttgcccg actgaggctt ccacggcatc ccccccctcc ttgcgcccgg cggccgggac
      901 ggcatactac cgccggtagg cccgagcgaa ccccctgaca gacatgggat ggatagagtc
      961 gattctcagt cggccggtct tcgtcgccgg cgacacgtgc tactgctggg aagacgtcgc
     1021 gctcttcgcc gtcctgaccc accggtggcg cgagctggag cgcgaggcgg cgg
//
LOCUS       DATIFF010000782         2995 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1023167, whole genome shotgun sequence.
ACCESSION   DATIFF010000782 DATIFF010000000
VERSION     DATIFF010000782.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2995
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1023167"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(230..1642)
                     /locus_tag="VLD58_11405"
     CDS             complement(230..1642)
                     /locus_tag="VLD58_11405"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HSB54959.1"
                     /translation="MADSPPRQGKAFDRAIVDGPLGPAVWMLAWPTILQNVIGGTQGV
                     VDHALVGRFVGYTGNAAIGVGFQIFLVVMVFVNSLFTGMSVLVARFTGANEHEKVNRT
                     VYQAFLASVILCLGILAPVGWFLSPTLLDLVHAAPHVQAEALPYLRIMFVASFGMLGF
                     FMLSAALRSAGDARTPLRLGVFLTGLNIVLNVILIRGLGPVPAFGTAGAALGSVIAGA
                     VVTGTGIWLLCSGSLVVHWHRGMDWRPDWPTIRALFRFGLPTGVQGIAMNIGGVLLLR
                     FIGSLAQSAQAQAAYAVGYTELFSFITWTSVGLLGAASTVAGQNLGAGKPERSIAGVR
                     HAATIGLGGAAIVGFFFVVMPGTLLGLFGMNEPSVVAIGTQLLHFLSVSGLFITVALT
                     YTGGLQGTGDTRSPLYISIVSQIVIPLGLCTVLSSMRPLEPMDIWIAILLGHATRCGL
                     SVIRFRQGKWRGIKVELSSA"
     gene            complement(1701..>2995)
                     /locus_tag="VLD58_11410"
     CDS             complement(1701..>2995)
                     /locus_tag="VLD58_11410"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HSB54960.1"
                     /translation="LAGSETLTLRNVSDRPAATVPLLLNRLMSISGVTDGKGAALRFS
                     QDVVLFEDDSVLQVNAAQVSPPRPVAPGDSARLTIRYGGHLVGYVETGSLYIRDKVDS
                     AFTILRQDAYAFPAVGVPSARANRAMGYDHLFSFVARVTVPAGQVVAAGGEALEPVRT
                     DSLVTWTYRSVLPSSVLNVAIAPYRTLARAGLRIFYFPEDSTGARMVDSAVAGAMAHF
                     AGWYGPLGHEGSLAVIEIPEGYGSQASLAGGIIETADAFRDRRQLYQLYHELSHLWNV
                     DDRDRPSPRWNEGFATFMQWRLAAALDGWSGYDAVLDWMERRLRSECRERGQCASVPF
                     AEYGRHELTDFSYSVGDLMFQALFETLGAEAFDRAYRSFFQQHRAAGGTAADLIAAFH
                     AENPASDRIFGEWYRTTHWYERLQAGEPLRQILRGYPH"
BASE COUNT          530 a         1019 c         1065 g          381 t
ORIGIN      
        1 aggagaacga gcacggggag gcgccgtcga gcaccgtaca tcaccttgtc aaacctggct
       61 gagttcccca aaacgtacgg acgggcggga gcggtgttgt ccgggtcggg caaggcaatt
      121 gtcaggaatt ggtgggggct accctcctcc cgccaggttt gcccgatccc gcccgccaac
      181 ctcgagctcg cccccttatc gagaagggcg cgggcccgcg gacgggcggt caggcggacg
      241 acagctccac cttgatcccc cgccacttcc cctgccggaa ccggatcacg ctgagcccgc
      301 accgcgtcgc gtggcccagc aggatcgcga tccagatgtc catcggctcg agcggccgca
      361 tcgaagaaag gacggtgcag agaccgaggg ggatgacgat ctgggagacg atggagatgt
      421 agaggggcga gcgggtgtcc ccggtgccct ggaggccgcc ggtgtaggtg agcgccaccg
      481 tgatgaagag ccccgacacc gagaggaagt gcagcagctg ggtgccgatc gccacgacac
      541 tcggctcgtt catcccgaag aggccgagca gcgtccccgg catcaccacg aagaagaagc
      601 ccacgatcgc cgctccgccg agcccgatcg tcgcggcgtg gcgcaccccc gcgatgctcc
      661 gctccggctt gccggcgccg aggttctgcc ccgccacggt ggacgcggcg cccagcagcc
      721 ccaccgaggt ccaggtgatg aaggagaaga gctccgtgta tcccacggcg taggccgcct
      781 gcgcctgcgc gctctgggcc agcgagccga tgaagcgcag gagcaggacc ccgccgatgt
      841 tcatcgcgat tccctgcacc cccgtcggca gcccgaagcg gaagagcgcc ctgatcgtgg
      901 gccagtcagg acgccagtcc atgccccggt gccaatggac caccaagctg ccggagcaga
      961 gcagccagat gccggtgccc gtcaccaccg cccccgcgat caccgacccc agcgcggcgc
     1021 cggcggtgcc gaaagcgggg accggtccga gcccgcggat caggatcacg ttcaggacga
     1081 tgttgagccc ggtgaggaag acccccagac ggagcggggt gcgggcgtca ccggcggagc
     1141 ggagcgccgc gctcagcatg aagaagccca gcatgccgaa gctcgccacg aacatgatcc
     1201 ggagatacgg cagcgcctcc gcctgcacgt gcggcgcggc atgcaccagg tcgagcagcg
     1261 tgggagagag gaaccatccc accggcgcca ggatgccgag gcagagaatg acggaggcga
     1321 ggaaggcctg gtagacggtg cggttcacct tctcgtgctc gttggcgccg gtgaagcggg
     1381 ccacgaggac gctcatcccg gtgaagagcg agttcacgaa gaccatcacc accaggaaga
     1441 tctggaatcc caccccgatg gcggcgttgc cggtgtaccc gacgaagcgg ccgaccaggg
     1501 cgtggtccac gactccctgg gtaccaccga tgacgttctg gaggatcgtc ggccacgcca
     1561 gcatccagac ggcggggccg agggggccgt ccacgatggc gcggtcgaag gccttgccct
     1621 gccggggggg agaatcggcc atggaggggg agaagatcgc ccggcggggg ccagggcaca
     1681 acgggaccgc ggccggaccg tcagtgcggg tagccccgga ggatctggcg gagcggttcg
     1741 cccgcctgga gccgctcgta ccagtgcgtc gtgcggtacc actccccgaa gatccggtcg
     1801 gacgccggat tctcggcgtg gaacgccgcg atcagatcgg cggcggtccc cccggcggcg
     1861 cggtgctgct ggaagaagct gcgataggcg cggtcgaagg cctccgcgcc aagcgtctcg
     1921 aagagggcct ggaacatcag gtcaccgacg gaataggaga aatcggtgag ctcgtgccgg
     1981 ccgtactccg cgaagggcac cgaggcgcac tggccacgct cccggcattc gctccggagc
     2041 cggcgctcca tccagtcgag cacggcatca tatcccgacc atccgtcgag cgccgccgcc
     2101 aggcgccatt gcatgaacgt cgcgaacccc tcgttccacc gcggggaggg gcggtcgcgg
     2161 tcgtccacgt tccagagatg ggagagctcg tggtagagct ggtagagctg gcgccggtcg
     2221 cggaaggcgt ccgccgtctc gatgatcccc ccggcgaggc tcgcctgcga cccgtagccc
     2281 tcgggaatct cgatgaccgc gaggctgccc tcgtggccca gcggaccgta ccagccggcg
     2341 aagtgcgcca tcgccccggc caccgcgctg tccaccatcc gggcgccggt cgagtcctcc
     2401 ggaaagtaga agatgcggag ccccgcccgc gcgagcgtcc ggtagggcgc gatcgcgaca
     2461 ttgagcaccg acgacggcag cacgctccgg taggtccagg tgaccaggga atcggtgcgc
     2521 accggctcca gcgcttcgcc tcccgcggcc acgacctggc cagccgggac ggtgaccctt
     2581 gcgacgaagg agaagagatg gtcgtacccc atcgcgcgat tggcgcgggc cgacggcacg
     2641 ccgaccgccg ggaaggcgta ggcgtcctgc cggaggatgg tgaacgcgct gtccactttg
     2701 tcgcggatgt agagcgagcc cgtttccacg tagccgacca ggtgcccgcc ataccgaatc
     2761 gtcaggcgcg ccgaatcccc gggcgccacc ggccgggggg gcgacacctg cgcggcgttc
     2821 acctgcagga ccgagtcgtc ctcgaagagc acgacatcct gactgaagcg gagcgcggca
     2881 cccttcccgt cggtcacgcc ggagatgctc atcagccggt tgaggaggag cggcaccgtc
     2941 gcggcggggc gatcgctgac attccggagg gtgagcgtct cgctgccggc gaggg
//
LOCUS       DATIFF010000783         2119 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1023454, whole genome shotgun sequence.
ACCESSION   DATIFF010000783 DATIFF010000000
VERSION     DATIFF010000783.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2119
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1023454"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(108..815)
                     /gene="flgA"
                     /locus_tag="VLD58_11415"
     CDS             complement(108..815)
                     /gene="flgA"
                     /locus_tag="VLD58_11415"
                     /inference="COORDINATES: protein motif:HMM:TIGR03170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation chaperone
                     FlgA"
                     /protein_id="HSB54961.1"
                     /translation="MTSSAKAIVIAALASLASLVTPGRSHAQARLAFVGTGSVTARLS
                     ARVAEAVSREWEVDTSRVVLSWGSGSLGQVPDTSAFRLIGGEAGWFSLILDAPHGATA
                     FFRLRAGITLDQPVAAHALVPGTVLGENDIRNEPRVHWGPLPSDPEPQAGPGWVVRRP
                     IAGGDVIEGFRVAPPPVVNAGKPVRMYYNTGRVSVAIDGVALNDAAVGQPVRMRTTGR
                     VGVVAGTAVAPGEARME"
     gene            complement(799..1593)
                     /gene="flgG"
                     /locus_tag="VLD58_11420"
     CDS             complement(799..1593)
                     /gene="flgG"
                     /locus_tag="VLD58_11420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009426 - bacterial-type flagellum basal
                     body, distal rod [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HSB54962.1"
                     /translation="MNPGLRASASGMRAQQTRIDAIANNLANVNTTAFKRSRANFEDM
                     LYETLQGSQLVRYEGTETLAPIQIGRGVRLADVQRIQSQGTFETTDNPFDLAIEGDGF
                     FQIQLPNGSSAYTRDGTFTRAADTGSLVTHAGYALQPEITIPPEATQVTISPTGVVSA
                     ILNSNGQQVELGQLELVRFANPSGLLSLGGNNYQATPASGDPMSGAPMEDGFGQVVQG
                     ALESSNVEIVQEMVDMIAAQRAYEVNSKAIKTAEEMIQTVTNDLIR"
     gene            complement(1714..>2119)
                     /locus_tag="VLD58_11425"
     CDS             complement(1714..>2119)
                     /locus_tag="VLD58_11425"
                     /inference="COORDINATES: protein motif:HMM:NF018168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="flagellar basal body rod C-terminal
                     domain-containing protein"
                     /protein_id="HSB54963.1"
                     /translation="GANRLADRHGNVLLGQNGPIQIPLRYATLEVHADGDVVVDGVRL
                     DRLRLETVDDTATLLKEGFGRFIPSTPTQVVDTATTVVRQGATEDSNQDTLKGTVDLV
                     TIQRAYAANVDSLKALDSVLGTVVNEVGKVNG"
BASE COUNT          305 a          764 c          700 g          350 t
ORIGIN      
        1 cgtggccgcg ggcggagccg cggtggtcga aggcgccgcc ggcgcaccct gagccgagag
       61 ccggcccgcc gccagcaaca gaaaagagaa gatcccgcgc gtccggctca ttccatcctc
      121 gcttcgcccg gggcaaccgc ggtgccggcc accacgccga cccgcccggt ggtgcgcatc
      181 cggaccggct gccccaccgc cgcatcgttg agcgccaccc cgtcgatcgc caccgagacc
      241 ctgcctgtgt tgtagtacat gcggaccggt ttcccggcgt tcaccaccgg cggtggcgcg
      301 acccggaagc cttcgatgac gtcgccgccc gcgatcgggc gccgcaccac ccagccgggc
      361 cccgcctgcg gctcggggtc ggaagggagc gggccccagt gcacccgcgg ctcgttccga
      421 atgtcgttct cgcccagcac cgtacccggc accagcgcat gggcagccac cggctggtcc
      481 agcgtgatcc cggcccggag ccggaagaac gcggtagcgc catgaggcgc atcgagaatg
      541 agcgagaacc acccggcttc gccgccgatg aggcggaagg ccgaggtgtc gggcacctgg
      601 ccgagtgagc cactgcccca cgacaggacc acccggctgg tgtccacttc ccattcccgg
      661 ctgaccgcct ccgccacccg cgccgacagc cgggcagtga cgctcccggt gccgacgaac
      721 gcaagccgcg cctgggcgtg ggagcgcccc ggcgtgacca gcgaagcgag ggaagcgagc
      781 gcggcgatca cgatcgcctt agcggatgag gtcattggtg acggtctgga tcatttcctc
      841 ggcggtcttg atcgccttgg agttcacttc ataggcccgc tgggccgcga tcatgtccac
      901 catctcctgc acgatctcga cgttggaaga ctcgagcgcg ccctgcacca cctggccgaa
      961 gccgtcttcc atcggcgccc ccgacatcgg gtcgcccgag gccggcgtcg cctggtagtt
     1021 gttcccgccg aggctgagca ggccgctggg attcgcgaag cgcaccagct cgagctggcc
     1081 gagctccacc tgttgtccgt tgctgttgag gatcgcgctc accacgccgg tgggcgagat
     1141 cgtcacctgg gtcgcttccg gcggaatggt gatctcgggc tggagcgcgt acccggcgtg
     1201 ggtcacgagc gagccggtgt cggccgcgcg ggtgaaggtc ccgtcccggg tgtaggcgct
     1261 gctgccgttc ggcagctgga tctggaagaa cccgtcgccc tcgatcgcga ggtcgaaggg
     1321 attgtcggtg gtctcgaagg tcccctggct ctggatccgc tgcacgtcgg ccagccgcac
     1381 gccccggccg atctggatcg gcgccagcgt ctcggtgcct tcgtagcgga ccagctgcga
     1441 gccctggagc gtctcgtaca gcatgtcctc gaagttcgcc cggctccgct tgaaggccgt
     1501 ggtgttgacg ttggcgagat tgttggcgat ggcgtcgatg cgggtctgct gcgccctcat
     1561 gccgctcgcc gatgcccgaa gtcccggatt cattgctgtg tcctttgcgc ctttgagttc
     1621 cttctcggct tgcggtcagg ggtcaggggc catgccctcg accccaagcc ccagaccact
     1681 agccccaagc ccccgacccc cgacctcaag cccctagccg ttaaccttcc ccacttcgtt
     1741 caccacagtc cccagcaccg agtcgagcgc cttgagcgaa tcgacgttgg cggcataggc
     1801 ccgctggatg gtcaccaggt cgaccgtgcc cttgagcgtg tcctggttgc tgtcttcagt
     1861 cgcgccctgc cgcaccaccg tggtcgcggt gtccaccacc tgggtgggtg tcgaagggat
     1921 gaaccggccg aacccttcct tcagcagcgt ggcggtatcg tccaccgtct cgagccggag
     1981 ccggtcgagc cgcaccccgt cgaccaccac gtcgccgtcg gcatgcactt ccagggtggc
     2041 gtagcggagc gggatctgga tcggaccatt ctgccccagc agcacattgc cgtgccggtc
     2101 cgcgagtcgg ttggcgcca
//
LOCUS       DATIFF010000784         1991 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1023547, whole genome shotgun sequence.
ACCESSION   DATIFF010000784 DATIFF010000000
VERSION     DATIFF010000784.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1991
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1023547"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            123..923
                     /locus_tag="VLD58_11430"
     CDS             123..923
                     /locus_tag="VLD58_11430"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSB54964.1"
                     /translation="MPPAGKPIVFVHGLWLHTDSWHAWVERFRAAGYVPVAPGWPGTS
                     TTIEETRAQPDGVAGKGIDDVVEHYAQIIRGLEETPIVIGHSFGGLIVQRLLGQGLAV
                     AAVAIDAAPIKGVIYVPLSALRMASVALKNPANWNRAVSLTPGQFRYGFGNTLPAEES
                     AELYRRWTVPSPGRPLFEAAVANLSPRSPARVDTRNGNRGPLLLIAGGQDRTVPAVIT
                     RSTYKLYRKSPAITDYKEFADRGHSLTIDNGWHEVADAVLSWLKQHAL"
     gene            complement(1038..>1991)
                     /locus_tag="VLD58_11435"
     CDS             complement(1038..>1991)
                     /locus_tag="VLD58_11435"
                     /inference="COORDINATES: protein motif:HMM:NF014825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SEC-C metal-binding domain-containing protein"
                     /protein_id="HSB54965.1"
                     /translation="VSRYGEQALEREAEAGRHPDWAGELLLEAATAWRRAGEQERAIA
                     VLRELAASGGEEGQFARVLLAEVYFDLGRDDAARAELAKLKAAPPCSPGPCEVAAELF
                     EERGDLAAAGEWYDAAAAVLTDDELAALGGEFGWASYAAHVLLGRSRVRQLLGVPPDE
                     FDDAVRRARERSGVGAFSSADDLLAGHRGVPLGTREVRTLFWQRAEFHASRERWPALF
                     DGNGTDPIAYHRGLEDQFRRLSGRGVARVMLVPGTAVGLDRFALGTGRDPAEETTRHA
                     YMCELVDAGETITWPPPRNGRCWCGSGSKYKKCCGSPPPPP"
BASE COUNT          325 a          707 c          651 g          308 t
ORIGIN      
        1 caagtggggt gcagcagacg ggggcaccac gccggcgctc gccgtgacac agtcaacgcg
       61 tggccacact gaaccgcggg cgtctctagg ctggtatcgg cactaaacga aaagagcgag
      121 acatgccccc agcaggcaaa cccatcgtct tcgtccacgg tctttggctg cacacggact
      181 catggcatgc ctgggtggag cggttccggg cggctggtta cgtaccggtc gcaccggggt
      241 ggccgggtac ctccacaacg atcgaggaaa cccgagcgca gcccgacggc gtcgctggca
      301 aagggatcga cgatgtcgtc gagcactacg cccagatcat ccgtgggctg gaggagacac
      361 cgatcgtcat cggccactcc ttcgggggcc tcatcgtgca gaggttgctg ggacagggcc
      421 ttgctgtcgc ggcggtggcg atcgatgccg cgcccatcaa gggcgtgatc tacgttccgc
      481 tgtcagcgct gcggatggcc tcggtcgccc tgaagaaccc cgccaactgg aaccgcgcgg
      541 tttcgcttac tccaggccag ttccgttacg gtttcggcaa caccctgccg gcggaagagt
      601 ctgccgaact gtaccggcgc tggaccgttc cttcgccggg gaggcccttg tttgaagcgg
      661 ctgttgccaa cctttccccc cggtctcccg cgagggtcga tacgcgcaat gggaatcggg
      721 gacctctttt gctgatcgcc ggcggccagg accgcacagt ccctgcggta atcactaggt
      781 cgacctacaa gctctaccgt aagtcgcccg cgattaccga ctacaaggaa tttgctgacc
      841 gaggccactc actcacgatt gacaatggct ggcacgaggt tgccgacgcg gtactctcct
      901 ggctcaagca gcatgctctg tgacgaggtc atctgtagtg cggctggctc gaggcgcgcg
      961 gcgcgaaccg gccgcacagc ggaagtcgag cagcacttgt ctcgataagg taacgtcagt
     1021 gagaccaagt acgatcgtta cggtggcggc ggcgggctgc cgcagcactt cttgtacttg
     1081 gacccggaac cacaccagca ccggccatta cggggtggcg gccaggtgat cgtttcgccc
     1141 gcgtcgacca gctcgcacat gtaggcgtgc cgggtggtct cctccgcggg gtcccggccg
     1201 gtgcctaggg cgaaccggtc aagtcccacg gcggtgccgg ggacgagcat cacccgggcg
     1261 accccgcgcc cggacagccg gcggaactgg tcttccaggc cgcggtggta ggcaatcggg
     1321 tccgtcccgt tgccgtcgaa cagggccggc cagcgctcgc gactggcgtg aaactccgcg
     1381 cgttgccaga acagggttcg cacctcgcgg gtcccgagcg gcactcctcg gtggcccgcc
     1441 agaagatcgt cggcggacga gaacgctccg acgccgctcc gctcccgcgc ccggcggacg
     1501 gcatcgtcaa actcgtccgg tgggacgccg aggagctggc gcacccgcga ccggcccagc
     1561 agcacgtgtg ccgcgtaaga ggcccatccg aactccccgc cgagcgcggc cagctcgtcg
     1621 tcggtcagga ccgcggccgc ggcgtcgtac cactcccccg cagcggcaag atccccgcgc
     1681 tcttcgaaca gctcggcggc cacctcacac ggaccgggcg agcacggcgg tgcggccttg
     1741 agcttcgcca gttcggcgcg cgcggcatcg tcgcggccca ggtcgaagta cacctcggcc
     1801 agcaacaccc gagcgaactg tccctcctcg ccccccgacg cggccagctc ccgcagcacg
     1861 gcgatggccc gctcctgctc gccggcccgc cgccaggccg tcgccgcttc caagagcaac
     1921 tcgcccgccc agtcggggtg acgcccggcc tccgcctccc gctcgagcgc ctgctcgccg
     1981 tagcggctca c
//
LOCUS       DATIFF010000785         2099 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1637244, whole genome shotgun sequence.
ACCESSION   DATIFF010000785 DATIFF010000000
VERSION     DATIFF010000785.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1637244"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..472)
                     /locus_tag="VLD58_11440"
     CDS             complement(<1..472)
                     /locus_tag="VLD58_11440"
                     /inference="COORDINATES: protein motif:HMM:NF027971.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSB54966.1"
                     /translation="MSIRLTFHGAAGQVTGSMHMIEAAGARILLDAGLFQGRRFESHE
                     LNAKLPFDPTLIDAIILSHAHIDHSGRLPLLVRHGFHAPILATPATRDLCAVMLADAA
                     RIQEKDAEFLTRRGKMGPGSEPLYSLPDAVAVQDLMMGLPYRRVHNLRKHLSFEF"
     gene            complement(509..1450)
                     /locus_tag="VLD58_11445"
     CDS             complement(509..1450)
                     /locus_tag="VLD58_11445"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HSB54967.1"
                     /translation="MLLTGALLLLQAAAAPRSVAVTFDDLPVISVVASPEAARDTTTT
                     RLLAAIRKHAVPAIGFVNENKLLDTAGALVPARVTYLRQWLSAGLELGNHTWSHLDLH
                     RVTLQEYEAEIIRGDSVTRQLMTQAGRTLRYFRHPFLHTGRSLAVRDSLNQFLAGHGY
                     RVAPVTIDNSDYVFAAAYDRARTTGNAALALRIRHDYLGYMDTVTAFYQHQSQAILGR
                     ELPQILLLHANRLNADTFDELAGMLERRGYRFVTLETALQDPAYSFRDEYAGPAGITW
                     LHRWAMTAGMPGSTFRGEPEVAAWVADAATGRSTAAN"
     gene            complement(1450..2094)
                     /gene="upp"
                     /locus_tag="VLD58_11450"
     CDS             complement(1450..2094)
                     /gene="upp"
                     /locus_tag="VLD58_11450"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HSB54968.1"
                     /translation="MPHPAYPNLTVLDHPLIQHKLTLLRDKATSTRDFKQLTAEIAML
                     MAYEVTKHLPTDPVEIETPLERMTGRMVSDKKLTLVPILRAGLGMVDGVSQLLPTARV
                     GHIGLARDESSLEPMRYYAKLPGEETDRDFFILDPMLATGGSATAAVTTLKTAGARRI
                     RFLCIVAAPEGARRMLEGHPDVPVFAAALDRQLNEQGYILPGLGDAGDRLFGTR"
BASE COUNT          325 a          622 c          814 g          338 t
ORIGIN      
        1 tgaactcgaa ggagaggtgc ttgcggagat tgtgcacccg gcggtagggc aggcccatca
       61 tcaggtcctg caccgcgaca gcatcaggca gtgagtagag cggttcgctc cccggcccca
      121 tcttgccccg ccgggtcagg aactcggcgt ccttttcctg gatccgggcc gcgtcggcga
      181 gcatgacggc gcagagatca cgggtagccg gtgtggcgag gatgggggcg tgaaagccgt
      241 gacgtaccag gagcggcagc cggcccgagt gatcgatgtg ggcgtggctc aggatgatcg
      301 cgtcgatcag tgtgggatcg aacggcagct tggcgttgag ctcgtggctc tcgaaccggc
      361 ggccctgaaa gaggccggca tcgagcagaa tgcgggcgcc cgccgcctcg atcatgtgca
      421 tcgagccggt gacctgcccc gcggcgccat ggaaagtgag ccggatcgac attgagtggg
      481 ctagaggtcg ggggtcgggg gtcgagggct agttggccgc ggtagagcgg cccgtggcgg
      541 cgtccgccac ccaggccgcg acctcgggtt cgccccggaa ggtgctgccc ggcattcccg
      601 ccgtcatggc ccagcgatgg agccaggtga ttcccgccgg accggcatac tcatcgcgga
      661 agctataggc tggatcctgg agcgccgtct ccagcgtcac gaagcggtag cctcggcgtt
      721 cgagcatccc cgccagctca tcgaaggtat cggcgttgag ccggttggcg tgcagcagca
      781 gaatctgcgg cagctcgcgg ccgaggatcg cctgggactg atgctggtag aaggctgtga
      841 cggtatccat gtaccccaga tagtcgtgcc ggatccggag ggcgagcgcc gcgttgccgg
      901 tggtgcgagc ccggtcgtag gccgcggcaa agacgtagtc ggaattgtcg atggtgaccg
      961 gggcgacgcg atagccgtgc ccggcgagga actggttcag gctgtcgcgg acggccaggc
     1021 tccggccggt atggagaaac gggtgccgga agtaccggag ggtccgtccc gcctgcgtca
     1081 tgagctgccg ggtgaccgag tcgccccgaa tgatctccgc ctcgtattcc tggagggtaa
     1141 cccggtggag gtcgaggtga gaccaggtgt gattccccag ctccagtccg gccgagagcc
     1201 actgccggag gtatgtaacc cgtgccggta ccagcgcgcc cgctgtgtcg aggagtttgt
     1261 tctcgttgac gaacccgatg gccggcaccg cgtgcttccg gatggcggcg aggagccggg
     1321 tggtcgtggt gtcgcgggcg gcctccggcg aggcgacaac cgagatcacc ggcaggtcat
     1381 cgaaggtgac ggccacactc cggggcgccg ccgcggcctg cagcaggagc agcgcgccgg
     1441 tcagcagcat cagcgggtcc cgaagagccg gtcgccggcg tcgcccagtc cggggaggat
     1501 gtagccctgt tcgttgagct ggcggtcgag cgcggcggcg aagaccggga catcggggtg
     1561 gccctcgagc atgcggcggg cgccctcggg cgcggcgacg atgcagagga agcggatccg
     1621 ccgggcgccg gccgtcttga gggtcgtcac cgcggcagtg gccgacccgc cggtggcgag
     1681 catcgggtcg aggatgaaga agtcgcggtc ggtctcctcg ccggggagct tggcgtagta
     1741 gcgcatcggc tcgagtgacg actcgtcgcg cgccaggccg atgtggccca cccgtgccgt
     1801 ggggaggagc tgggagacgc cgtccaccat gccgagtccg gcgcggagaa tcggcaccag
     1861 ggtcagcttc ttgtcgctca ccatccggcc ggtcatccgt tcgagcgggg tctcgatctc
     1921 gaccgggtca gtggggaggt gcttggtgac ctcgtaggcc atgagcatcg cgatctcggc
     1981 ggtgagctgc ttgaagtcgc gggtgctggt ggccttgtcg cggagcaggg tgagcttgtg
     2041 ctggatcaga gggtgatcga gcaccgtgag gttgggatag gccgggtggg gcatgcggg
//
LOCUS       DATIFF010000786         2098 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1177823, whole genome shotgun sequence.
ACCESSION   DATIFF010000786 DATIFF010000000
VERSION     DATIFF010000786.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2098
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1177823"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            196..998
                     /locus_tag="VLD58_11455"
     CDS             join(196..529,529..998)
                     /locus_tag="VLD58_11455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012948683.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HSB54969.1"
                     /translation="MSDEVLIDELWRRLGPLLPPRPRRFRYPGRHAVNDRVVLAGIVW
                     VLRHDVPWRQLPTSFGVSGVTCWRRLRDWQAAGVWQKLHEALLAGLHAAGRLDLHAAI
                     VDSSHVHALKRGEATGPSPVNRGHAGSKHHLITNRHGVPLAVIVTAGNRHDITQLTPL
                     VEAIPPIRGRRGRPKRRPRYLLADRGYDHSAYRRQLAAHGITAIIARRGTAHGSGLGR
                     HRWPVERTLGWLHQFRWLRTRWERRADIHHALLSLACSIICLRKLRGSF"
     gene            1079..1881
                     /locus_tag="VLD58_11460"
     CDS             join(1079..1412,1412..1881)
                     /locus_tag="VLD58_11460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012948683.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HSB54970.1"
                     /translation="MLDDGLTDELWQRLAPLIPPQPRRFRYPGRRPVHDRAALTGIVF
                     VLRTGVAWRDLPATFGCSGVTCWRRLRDWQATGVWQALHERLLAELRAAGRLDLHAAL
                     IDAAHLHALKRGQQVGPSPVNRGHPGSKHHLITDRAGIPLAVALTGGNRHDVTQLLPL
                     VEAIPPIRGRRGRPKRRPRYLLADRAYDHRRYRRQLAERGITVIIARRSTPHGFGLGR
                     QRWPVERTLGWLHQFRRLRTRWERRTDIHQAFLLLACSIICLRRLHRSL"
BASE COUNT          333 a          766 c          672 g          327 t
ORIGIN      
        1 cggccagctt ccacaacccg tcctgcacca gccgctgcac aaactcctcc accacacgag
       61 cggatcacct ctgaggccaa cccacaacca catgagacac gctcttagac ctggtttcac
      121 aaagactgat caagtggtgg gcggcgtcgg cgtgtcatgc ccagcctccg gcgctgacgg
      181 tttctgatcg tcggcgtgtc cgacgaggtg ctcatcgatg agctgtggcg gcggctgggg
      241 ccgctgctcc caccccgacc gcgccggttc cgctatccgg gtcggcatgc ggtcaacgac
      301 cgggtcgtgc tggccggcat cgtctgggtg ctgcgccacg acgtgccgtg gcggcagctg
      361 ccaacatcct tcggggtgtc cggagtgacc tgctggcgac ggctgcggga ctggcaggcc
      421 gccggggtgt ggcagaagct gcacgaggcg ctgctggccg gcctgcacgc cgctggtcgg
      481 ctcgacctgc acgccgcgat cgtcgactct tcccatgtgc acgctctcaa aggggggaag
      541 cgaccggtcc cagcccggtc aaccgagggc atgccggctc aaaacatcat ctgatcacca
      601 atcggcatgg ggtgccactg gcagtgatcg tcaccgccgg gaatcggcac gacatcaccc
      661 agctgacccc gctggtcgag gcgatcccac cgatccgcgg ccgacgcggc cggccgaaac
      721 ggcggccccg ctacctgctg gctgaccgtg gctacgacca cagtgcctac cggcggcagc
      781 tcgcggccca cggcatcacc gcgatcatcg cccgccgcgg cacagcgcac ggctccggcc
      841 tgggccggca ccgctggccg gtggagcgga cgctcggctg gctgcaccag ttccgctggc
      901 tgcgcacccg gtgggaacgc cgcgccgaca tccatcacgc gctgctatcg ctggcctgtt
      961 cgatcatctg tctccgcaaa ctcagaggat cattctgaaa cgagctctaa gacctcgttt
     1021 cacaacgagt gcgtgtcggt cccacaccta atgatcaccg ggcggtagtg gtggtcgggt
     1081 gttggacgac gggctcaccg acgagctgtg gcagcggctg gcgccgctga tcccacccca
     1141 gccacggcgg ttccgctatc cgggccgccg gccggtgcac gatcgggcgg cgctgacggg
     1201 gatcgtgttc gtcctgcgca ccggggtggc ctggcgggat ctaccggcga cgttcggctg
     1261 ttcaggggtg acctgctggc ggcgactgcg ggactggcaa gccaccgggg tctggcaggc
     1321 cttgcacgag aggctgctgg ccgagctgcg cgccgccggc cggctcgacc tgcacgccgc
     1381 gctcatcgac gcagcgcatc tgcatgcgct caaagggggc agcaagttgg cccgagcccg
     1441 gtcaaccgcg gccaccccgg ctccaaacac cacctgatca ccgaccgggc cggcatcccg
     1501 cttgctgtgg ccttgaccgg cggcaaccgc cacgacgtca cccagctgct cccgctagtc
     1561 gaggcaatcc caccgatccg cggccggcgc ggccgaccga aacggcggcc ccgctacctg
     1621 ctggccgacc gtgcctacga ccaccgcaga taccgccgac agctcgccga acgcggcatc
     1681 accgtgatca tcgcccggcg cagcaccccg cacggcttcg gcctgggccg ccagcgctgg
     1741 ccggtggagc gcaccctcgg ctggctgcac cagttccgcc ggctgcgcac ccgctgggaa
     1801 cgccgcaccg acatccatca agcattcctg ttactggcct gctcgatcat ctgcctccgg
     1861 cggctccacc gctcattgtg aaacgaggtc taagactgtc tcgtaaatgc ccctggactg
     1921 atctagtgga gggtggacgg cgcccaggac atccaaccag ccctccagtg gaggaacacc
     1981 ccgctggtgc tccgcgtacg acttctctag tggaggctcg cggcggcggc gatccgttac
     2041 gagacaacct ctaggtccgt attgcccctc cagaatccgc tctcggcctc ggaagaag
//
LOCUS       DATIFF010000787         4308 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1637374, whole genome shotgun sequence.
ACCESSION   DATIFF010000787 DATIFF010000000
VERSION     DATIFF010000787.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4308
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1637374"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(151..1842)
                     /locus_tag="VLD58_11465"
     CDS             complement(151..1842)
                     /locus_tag="VLD58_11465"
                     /inference="COORDINATES: protein motif:HMM:NF015052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein
                     domain-containing protein"
                     /protein_id="HSB54971.1"
                     /translation="MSRPMDFVLALHSHLPYVLNHGRWPHGSDWICEATIDTYLPLLG
                     QLERLAHDRVAVPLTIGITPILANQLASPVYRDEQEAYFAQRLKTCAEAAESLSGTGD
                     AHLLPLARYWELHLLELQRQFRRYDGNLAEAFRKHEEAGRIELISCAATHGFLPLLSR
                     DESIRLQLSLGRAEHRRLFGKDPAGLWLPECAYRPRGPWEPMPGAPRIEDRAGIEEFV
                     AAAGYKFFFVDSHLAAAGHAFRLYGAEGGPTATGEVINSPYRAYRVAGSRGPTPVNAF
                     VRDPVASRQVWSRREGYPGDEWYLEFHKIRWPGGLKYWRVSAPGSDLGAKEEYEPARA
                     LARAAEHARHFVSLLERIGSHQPGTEAGGSPASKVIAVPFDTELFGHWWHEGVDFLGA
                     VYRELGRQRSVRPVTGSQHLGEAPADRAVHLTTGSWGANGDFSMWLNPGTEWTWPRLW
                     AIESTFWEVARPALANPSQHLILAQAAREMLLAMSSDWQFIISTGAVTDYAVKRFTEH
                     CTEAEFLISALQLDATHQSAAHTRAAELWEQDHVFPDILSAVRAALATPAPAVVG"
     gene            complement(1839..3350)
                     /locus_tag="VLD58_11470"
     CDS             complement(1839..3350)
                     /locus_tag="VLD58_11470"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR02095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004373 - glycogen (starch) synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch synthase"
                     /protein_id="HSB54972.1"
                     /translation="MSARPEVRISGEFPVPDAGMESAPFSVVHLAAEYGWLARTGGLA
                     EAVAGIASTQAAQGIPSAVIIPLHRSVRSAAPALERVAGPFQVQVGPRVEEARLFRIP
                     AEPGKARIYCLEHPYFDRAGLYGESGMDYPDNLQRWAFFCRAALEVLPRVTRTPCVLH
                     CHDWHTALAPVYLRTYHKGQPLADSIRTVVTVHNAGFQGHYPPSGMVEIGLPWELYTW
                     QYLEWHDKMNLLKGGLKFADAVTTVSPTHAHELRTPVGGFGLHDVFLWLGDRFTGIVN
                     GIDMEEWNPASDEHITANYSATDLSGKARCKAALQRSFGLPQRRRIPLFAMTARMTHQ
                     KGLELITGEYTLFMLEAQFIFLGTGEAKYEAMLKMYESRWPERISVHLGFSERLEHRL
                     MAGADIYLMPSLYEPCGLAQLRAERYGAIPIGRRVGGLADTIEDGHTGFLFDEYSSED
                     LLRVSRHVMDRYHDTPSWEGMMRNAMAKDFSWARSAEKYHAVYRRILATTAVA"
     gene            complement(3334..>4308)
                     /gene="glgP"
                     /locus_tag="VLD58_11475"
     CDS             complement(3334..>4308)
                     /gene="glgP"
                     /locus_tag="VLD58_11475"
                     /inference="COORDINATES: protein motif:HMM:TIGR02094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="HSB54973.1"
                     /translation="LKVEDVPIGHVTNGVHLPTWMSSRISRLLDKHLGEGWTERLDQP
                     GIWNAVLSLDDAELWQEHNETKRSLLTYVREEARRRWAERWKEAAHVVGAGTLISPDA
                     LVIGFARRFATYKRAALLFSDFDRLHDLLVNPWRPVQIIFAGKAHPEDGPGKEVLQQV
                     YAFTRDPRLQGRVAFIEDYEIHLAHRLVEGVDLWLNLPRVPLEACGTSGMKAGLNAVP
                     QLSTLDGWWAEGYMGQNGWAIPLSQPGQDTDRTDADHLFDLLEQEVVPMYYRRDARGL
                     PVEWISRMKHALRIAGERFTARRMVQEYATNYYAPASRGEVQSSVRPS"
BASE COUNT          661 a         1481 c         1488 g          678 t
ORIGIN      
        1 agatgcgctc gttccagtcg tggaacgggc gggctcccgg ctgctcttcg atggtgtcga
       61 gccaggggtt ttcgcgcggg ggctgataga agtggccgtg aatcacgacc gacctgcggg
      121 acatcggggg agactcggct ccggggctca ctagccgacg acggccgggg ccggagtagc
      181 cagtgccgcc cgtaccgcac tgaggatatc ggggaagacg tgatcctgct cccacagctc
      241 ggccgcgcgg gtatgggccg ccgactggtg ggtggcatcg agctggagcg ccgagatcag
      301 gaactccgcc tcggtgcagt gctcggtgaa gcgcttcacc gcgtagtcgg tcacggcacc
      361 ggtcgagatg atgaactgcc agtcggatga catggccagc agcatctcgc gggcggcctg
      421 cgccaggatc agatgctggc tggggttcgc cagcgccggc cgggccactt cccagaaggt
      481 cgactcgatg gcccagagcc tgggccaggt ccattcggtg cccgggttga gccacatgct
      541 gaagtccccg ttggcgcccc aggaaccggt agtgaggtgc accgcccgat cggccggcgc
      601 ctcgcccagg tgctggctcc cggtcaccgg acgcacgctc cgctggcggc ccagctcacg
      661 gtagaccgcg ccgaggaagt cgaccccttc gtgccaccag tggccgaaga gctcggtatc
      721 gaacggtacc gcgatcacct tcgacgcggg gctgccgccg gcctcggtcc cgggctgatg
      781 cgagccaatc cgctcgagca gcgacacgaa gtgccgcgca tgctcggctg cccgcgcgag
      841 cgcccgggcc ggttcgtact cctccttggc gccgaggtcg gagccggggg cgctgacccg
      901 ccagtacttg aggccgccgg gccagcggat cttgtggaac tcgagatacc actcgtcgcc
      961 cggatagccc tcccgccggc tccagacctg gcgggaggcc accgggtccc gaacgaacgc
     1021 gttgaccggc gtggggccgc ggctccccgc cacccgatag gcgcggtacg gcgagttgat
     1081 cacctcgccg gtggcggtgg gccccccctc ggcgccgtag agccggaatg cgtggcccgc
     1141 ggccgcgagg tggctgtcga cgaagaagaa cttgtagccc gccgcggcga cgaactcctc
     1201 gatccccgcg cgatcctcga tcctgggcgc gcccggcatc ggctcccacg gcccgcgcgg
     1261 acgataggcg cattccggga gccagaggcc cgccggatcc ttgccgaaga ggcggcgatg
     1321 ctccgcccgc cccaggctga gctggagccg gatgctttcg tcccggctga ggagcgggag
     1381 aaacccgtgg gtcgccgcgc aggagatcag ttcgatccgc ccggcttcct catgcttccg
     1441 gaacgcctcg gccaggttgc cgtcgtagcg gcggaactgg cgctggagct cgaggaggtg
     1501 cagttcccag taccgggcca gcggcagcag gtgggcatcg ccggttccac tcagcgactc
     1561 cgcggcctcg gcgcaggtct tgagccgctg ggcgaagtag gcctcctgct cgtcgcggta
     1621 gaccggactg gcgagctggt tggccaggat cggggtaatg ccgatggtga gcgggaccgc
     1681 cacccggtcg tgcgccagcc gctccagctg ccccaggagc ggcaggtagg tgtcgatcgt
     1741 ggcttcgcag atccagtcgc tgccatgggg ccagcggccg tgattgagga cgtacggcag
     1801 gtggctgtgg agcgcgagga cgaaatccat gggccggctc acgccaccgc cgtggtggcg
     1861 aggatccggc ggtacaccgc gtggtacttc tcggccgagc gggcccagct gaagtccttg
     1921 gccatggcgt tacgcatcat cccctcccac gacggcgtgt cgtgataacg atccatgacg
     1981 tgccgggaca cgcgcagcag gtcttccgag ctgtactcgt cgaacaggaa cccggtatgg
     2041 ccgtcctcga tcgtgtcggc caggccgccc acgcgccgcc cgatcgggat cgcgccgtac
     2101 cgttcggccc ggagctgtgc caggccgcag ggttcgtaga gcgacggcat caggtagatg
     2161 tccgcccccg ccatcagccg gtgctccagc cgctccgaga agccgagatg cacgctgatc
     2221 cgctcgggcc agcgcgactc gtacatcttg agcatcgcct cgtacttcgc ctcgccggtg
     2281 ccgaggaaga tgaactgggc ctcgagcatg aagagggtgt actcgccggt gatgagctcg
     2341 agccccttct ggtgggtcat ccgcgcagtc atggcgaaga gcggaatccg gcgcctctgc
     2401 ggcaacccga aactccgctg gagcgcagcc ttgcagcggg cctttccgga gaggtcggtg
     2461 gccgagtagt tggccgtgat gtgctcgtcg ctcgccgggt tccactcctc catgtcgatg
     2521 ccgttcacga tcccggtgaa gcggtcaccc agccagagga agacatcgtg cagaccgaac
     2581 ccgcccaccg gggtgcggag ctcgtgcgca tgcgtcgggc tcacggtggt cacggcgtcg
     2641 gcaaatttga gcccgccctt gagcaggttc atcttgtcgt gccactcgag gtactgccag
     2701 gtgtaaagct cccacggcaa cccgatctcg accatcccgc tcgggggata gtgcccctgg
     2761 aaccctgcgt tgtgcaccgt cacgaccgtg cggatgctgt cggccagcgg ctggcccttg
     2821 tggtaggtgc gcaggtagac cggagcgagg gcggtgtgcc agtcgtggca gtgtagcaca
     2881 cagggcgtac gggtcacccg tggcaggact tccagcgcgg cgcggcagaa gaaggcccag
     2941 cgctggagat tgtcggggta atccatcccc gactcgccgt agaggccggc gcggtcgaag
     3001 tagggatgtt cgagacagta gatccgggcc ttgcccggct ccgccgggat gcggaagagc
     3061 cgcgcctctt cgacccgcgg accgacctgc acctggaagg ggcccgccac ccgctcgagc
     3121 gcgggcgcgg cgctccgtac cgagcggtgc aggggaatga tcacggccga cgggatgccc
     3181 tgggccgcct gcgtcgacgc gatgcccgcc accgcctcgg ccaggccacc ggtgcgggcc
     3241 agccagccat actctgccgc cagatgtacc acgctgaatg gcgcgctctc catccccgca
     3301 tcggggacgg ggaactctcc cgagatccgg acctcaggac gggcggacac tcgactgtac
     3361 ctctccccgg ctcgcggggg cgtagtaatt ggtggcatac tcctgcacca tccgccgcgc
     3421 agtgaagcgc tccccggcaa tgcggagcgc gtgcttcatc cgcgagatcc actcgaccgg
     3481 caacccgcgg gcatcgcgtc tgtaatacat cggcaccacc tcctgttcca gcaggtcgaa
     3541 gaggtggtcc gcatcggtac ggtcggtatc ctgacccggc tgcgacagcg ggatcgccca
     3601 gccgttctgt cccatatagc cctcggccca ccatccgtcc agcgtggaga gctgcggcac
     3661 ggcgttgagc cccgccttca tcccgctggt gccgcaggcc tcgagcggca cccgcggcag
     3721 gttgagccag agatccaccc cttccaccag ccggtgggcc aggtggatct cgtagtcctc
     3781 gatgaaggcg acccgcccct ggagccgggg gtcgcgggtg aacgcgtaga cctgctgcag
     3841 cacttccttc cccgggccat cctccgggtg cgccttgccc gcgaagatga tctgcaccgg
     3901 ccgccaggga ttcaccagca ggtcgtgcag ccggtcgaag tcgctgaaga ggagcgccgc
     3961 ccgcttgtag gtggcgaacc ggcgggcgaa cccaatcacc aacgcatcgg ggctgatcag
     4021 ggttccggcg cccaccacgt gggccgcttc cttccaccgc tcggcccagc ggcggcgggc
     4081 ctcttcccgc acgtaggtca gcaggctccg cttggtctcg ttgtgctcct gccagagctc
     4141 ggcgtcgtcg agcgagagca ccgcgttcca gatccccggc tggtccagcc gctcggtcca
     4201 cccctcgccc aggtgcttgt cgagcagccg cgagatccgg ctcgacatcc aggtggggag
     4261 atgcaccccg ttggtgacgt gcccgatcgg cacgtcctcg accttgag
//
LOCUS       DATIFF010000788         1183 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1946155, whole genome shotgun sequence.
ACCESSION   DATIFF010000788 DATIFF010000000
VERSION     DATIFF010000788.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1946155"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..385
                     /locus_tag="VLD58_11480"
     CDS             <1..385
                     /locus_tag="VLD58_11480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54974.1"
                     /translation="TGLKGGNDLTFGRLHVIDVSDIEHPQEVAWYEPTDGGVHNVWVV
                     GDTLYLGNYQGGARVLDISGELKGDLLRQGREMSWMLTADSTGAQPHTPFAWGAVVRD
                     GNIFVPDINSGLWILRLEPKREVTP"
     gene            complement(404..931)
                     /locus_tag="VLD58_11485"
     CDS             complement(404..931)
                     /locus_tag="VLD58_11485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54975.1"
                     /translation="MRRWVTALLVTAVILALPLSGQDPTPPPAESVPAAPPAPIPPTP
                     GQERYLQGLRTAGRGVAQIKDGMGRLSRVQAGRDTTQIRQAARRLGGLCSAARGFLTS
                     GRGKMEPAAYEAPVRRPARDLVLQVDSLSLMATECQLTAGRSPGPVAAGLLTRIRAYE
                     AALAAFRTAIGLPNR"
     gene            992..>1183
                     /locus_tag="VLD58_11490"
     CDS             992..>1183
                     /locus_tag="VLD58_11490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54976.1"
                     /translation="MTVPATTRAWRMFEDRAEALSHFFARAGEAPRFIAFDDTVGCPL
                     DQALAVVEWTEAAGILHDDD"
BASE COUNT          182 a          382 c          438 g          181 t
ORIGIN      
        1 cacggggctc aagggcggca acgatctcac gttcggccgg ctgcatgtga tcgacgtgtc
       61 cgacatcgag cacccccagg aggtggcctg gtacgaaccc accgacggcg gcgtgcacaa
      121 cgtgtgggtg gtgggcgata ctctctacct cggcaactac cagggcggcg cccgggtgct
      181 cgacatctcc ggggagctca agggcgatct gctgcggcag gggcgggaga tgagctggat
      241 gctcacggcc gattcgaccg gcgcgcagcc ccatacgccg ttcgcctggg gcgccgtcgt
      301 gcgcgacggg aacatcttcg tgccggacat caattcggga ctatggattc tccggctgga
      361 gccgaagcgg gaagtgacgc cgtaacggcg gacggggacg cggttatcgg ttcgggagtc
      421 cgatcgccgt ccggaacgcg gccagcgccg cctcgtacgc ccggatgcgg gtgagcagtc
      481 cggcggcgac gggtcccggt gatctgccag ccgtcagctg gcactccgtg gccatgagcg
      541 agagcgaatc gacctggagg acgaggtccc gggcgggccg ccgcaccggc gcttcatagg
      601 cggccggctc catcttgccg cggccgctcg tcaggaagcc gcgcgcggcc gagcacaggc
      661 cgcccaggcg acgcgccgcc tggcggatct gcgtcgtatc gcgcccggcc tgcacacggc
      721 tcagacgacc catgccgtct ttgatctggg ccacccctcg accggcggtg cgcaggccct
      781 ggaggtagcg ttcctggccc ggggtggggg ggatgggagc cgggggagcg gcgggaaccg
      841 actctgcagg aggaggggtc gggtcctgcc ccgacagggg cagcgcgagg atcactgcgg
      901 tgacgaggag ggcggtaacc caacggcgca tgcgaggttc ctgcatctgg agtccggcca
      961 ctttgctcag gccatgggtt ataatctggt catgaccgtt cccgcaacta ctcgggcatg
     1021 gcgtatgttc gaggaccgcg ccgaggcgtt gagccacttc ttcgcccggg cgggtgaagc
     1081 cccccgcttc atcgccttcg acgatacggt gggatgcccc ctcgatcagg ccctggccgt
     1141 ggtggaatgg accgaggccg ccgggatcct gcatgatgac gac
//
LOCUS       DATIFF010000789         1075 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1024308, whole genome shotgun sequence.
ACCESSION   DATIFF010000789 DATIFF010000000
VERSION     DATIFF010000789.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1075
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1024308"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..748)
                     /locus_tag="VLD58_11495"
     CDS             complement(<1..748)
                     /locus_tag="VLD58_11495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSB54977.1"
                     /translation="MATAASASRFTGVDFYDSDSLLSEEERAVRDTVRQWVDERVMPI
                     IGECYVAGRFPRELVPGMAELGLFGANLPEEYGCAGLSNVAYGLIMQELERGDSGIRS
                     FASVQGALVMYPIYAFGSADQKKGWLPALAAGGEIGCFGLTEPDFGSNPGGMVTTARE
                     TADGWVLNGTKMWITNGSQATVAIIWAKTGDIGDPRSIRGFIVPTDTKGFTARDHKGK
                     LSLRASDTSELHLEDVPLPGSAVLPQSGGGK"
     gene            complement(815..>1075)
                     /locus_tag="VLD58_11500"
     CDS             complement(815..>1075)
                     /locus_tag="VLD58_11500"
                     /inference="COORDINATES: protein motif:HMM:NF021759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT-like domain-containing protein"
                     /protein_id="HSB54978.1"
                     /translation="LSRRHLAEHPWAEVEHTMLHEMVHQWQAESRLPIDHGPTFREKA
                     RAVGVLPAARRAVSRAAAPAGPRTFGSAARHGSELLERRSRE"
BASE COUNT          159 a          387 c          366 g          163 t
ORIGIN      
        1 tcttgccccc ccccgactgg ggaagcaccg cgctcccggg caggggtacg tcctcgagat
       61 gcagctcgct cgtgtccgaa gcgcggagcg agagcttgcc cttgtgatcc ctggccgtga
      121 agcccttcgt gtccgtgggc acgatgaacc cgcggatgga tctcgggtcg ccgatgtccc
      181 cggtcttcgc ccagatgatg gcgacggtgg cctgcgatcc gttggtgatc cacatcttgg
      241 tgccgttcag gacccagcca tccgcggtct cccgcgcggt cgtgaccatg cccccgggat
      301 tggatccgaa gtcgggctcc gtcagcccga agcagccgat ctctcctccc gcggcgagag
      361 ccggcagcca gcccttcttc tggtccgccg acccgaacgc gtagatgggg tacatcacca
      421 gggcgccctg caccgaggcg aatgagcgga tgccgctgtc gccccgctcg agctcctgca
      481 tgatgagccc gtaggcgacg ttgctcaggc cggcgcaccc atactcctcc ggcaggttgg
      541 cgccgaacag ccccagctcc gccatgcccg ggacgagctc ccggggaaag cgaccggcga
      601 cgtagcactc gccgatgatc ggcatcacgc gctcgtctac ccactgccgg accgtgtccc
      661 gaacggcgcg ctcctcctcg gagaggagcg agtcggaatc gtagaagtcc acgccggtga
      721 accgggacgc ggaagccgcg gtggccatgg cgagcctcgg gaatcagggt ctggcgtcta
      781 tgatagtcgc ggggcggaca cccgggcagg cgtgctactc gcgggaacgg cgctccagca
      841 gctcggagcc atgacgggcc gccgagccga aggtcctcgg cccggctggc gcggcggccc
      901 ggctcaccgc ccgccgcgcg gccggcagca cgcccacggc ccgcgccttc tcccggaagg
      961 tggggccgtg gtcgatgggc agccgggact ccgcctgcca ttgatgcacc atctcgtgca
     1021 gcatggtgtg ctcaacctcg gcccacggat gctcggccag atggcggcgg ctcag
//
LOCUS       DATIFF010000790         1115 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_255541, whole genome shotgun sequence.
ACCESSION   DATIFF010000790 DATIFF010000000
VERSION     DATIFF010000790.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1115
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_255541"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..576
                     /locus_tag="VLD58_11505"
     CDS             <1..576
                     /locus_tag="VLD58_11505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54979.1"
                     /translation="FLAAVHASWRFEGVIGLGYLSMLVVALSGIAGRYLYIHIPRSAS
                     GLELTAEEIAAERQGLIAEIAKATGLPAPQVEAVLRSDPSPTEGLGILGTLKRMVIDD
                     LTRWRAARALRRACESTYGAIRPNRKTVRRVLKLAHKEMALTQQARMLAATQQLFRYW
                     HVAHRPFAITALVAVLVHVGVVVAMGATWFW"
     gene            581..>1115
                     /locus_tag="VLD58_11510"
     CDS             581..>1115
                     /locus_tag="VLD58_11510"
                     /inference="COORDINATES: protein motif:HMM:NF014176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HSB54980.1"
                     /translation="MSRRLSLVLMIMMLTLGWSSWSNRLAAQISPGPLAKPHAELEGT
                     LKCTKCHAGGKEAMSSNCLGCHKDLGWLAERNRGYHATREVKGQSCASCHPDHAGASF
                     DLIKWPDGSRERFDHRRAGWPLLQSHAEQKCADCHNPKFRSSPAARLTPSAGAGEFVG
                     LETSCSSCHTDVHRGNLG"
BASE COUNT          171 a          397 c          371 g          176 t
ORIGIN      
        1 ttcctcgccg cggtgcacgc atcctggcgc tttgaagggg tcatcggcct gggctacctc
       61 tcgatgctgg tcgtcgccct gagtggaatc gccggccgct acctctacat ccatatcccc
      121 cgctccgcct ccggtctcga gctcaccgcc gaggagatcg cggcggagcg gcagggactg
      181 atcgcggaga tcgccaaggc caccgggctc ccggcgccgc aggtcgaggc cgtgctccgc
      241 tccgatccct cccccaccga ggggctgggc atcctgggca ccctcaagcg aatggtgatc
      301 gacgacctga cccgctggcg cgcggcccgc gcgctccgcc gggcctgcga gtcgacctac
      361 ggagcgatcc gccccaaccg gaagacggtg cggcgggtgc tcaagctcgc ccacaaggaa
      421 atggcgctga cccagcaggc ccggatgctt gcggcgacgc agcagctctt ccgctactgg
      481 cacgtggccc accgcccttt tgcgatcacc gccctggtgg cggtgctggt gcacgtcgga
      541 gtggtcgtgg cgatgggtgc cacctggttc tggtgagcgt gtgtcccggc gtctgtccct
      601 ggtcctcatg atcatgatgc tcaccctcgg ctggagcagt tggagcaacc gcctagcggc
      661 ccagatctct ccgggtccgc tggcgaagcc ccatgccgag ctggagggga cgctcaagtg
      721 caccaagtgc cacgccggtg ggaaggaagc gatgtcgtcc aactgcctcg gctgccacaa
      781 ggacctcggc tggctggcgg agcggaaccg cggctatcac gccacccggg aggtgaaagg
      841 gcagagctgc gcaagctgtc accccgatca tgccggcgcc tcgtttgacc tcatcaagtg
      901 gcccgacggg agccgggagc gcttcgatca ccgccgcgcc ggctggccgc tgctccagag
      961 ccatgcggag cagaagtgcg ccgactgcca taaccccaaa ttccgaagtt cgcccgccgc
     1021 gcggctgacc ccctcggccg gcgccggtga gttcgtaggg ctcgagacca gctgctccag
     1081 ttgccacacc gatgtgcacc ggggcaacct gggga
//
LOCUS       DATIFF010000791         1306 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1331582, whole genome shotgun sequence.
ACCESSION   DATIFF010000791 DATIFF010000000
VERSION     DATIFF010000791.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1331582"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..356)
                     /locus_tag="VLD58_11515"
     CDS             complement(<1..356)
                     /locus_tag="VLD58_11515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54981.1"
                     /translation="MDTSPPPSLLGSRLFRPSVALTGLFVLALFFALHEGRAFFLPIV
                     LVLLLHFLLSPVIRALKAARVPESLGAAAVLGGLLLALSLAGYYLAGPTREWLAQAPA
                     SVAQTQARLRRLLRPVA"
     gene            431..1177
                     /locus_tag="VLD58_11520"
     CDS             431..1177
                     /locus_tag="VLD58_11520"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HSB54982.1"
                     /translation="MAQLWQTLMSVWAWLVLGAALVLWLPVMGLLRLATLSDPGRYAV
                     GYVFRRIGPVMATLNPLWRFRTSGTPPADPRRPYVVVSNHESFADILLISHLPWEMKW
                     LSKAELFRIPVLGWLMRLAGDIPVRRGEGRSAVEALQRCREVLKNRVSVMIFPEGTRS
                     MTEDMLPFKDGAFRLAIQSGVPILPLAVSGTGTALRKHDWRFGRSVAEVRVLEPVETT
                     GLTVKDVPALRDRVRQQILDARDALRREHG"
BASE COUNT          202 a          473 c          444 g          187 t
ORIGIN      
        1 gccaccggcc tgagcagacg acggagccgg gcctgggtct gggccacgct cgcgggcgcc
       61 tgcgccagcc actcccgggt cggcccggcc aggtagtacc cggccaggct cagcgccaag
      121 agaagcccgc ccagcactgc cgccgcgccc aacgactccg ggactcgcgc cgccttgagc
      181 gcgcggatga ccggactcag caggaagtgg agcagcagga ccagcacgat cgggaggaag
      241 aacgcccgcc cttcatgcag ggcgaagaag agcgccagca cgaagagccc ggtgagcgcg
      301 accgacggcc ggaagagccg gctgcccagc agtgaaggag gtggtgacgt gtccacgatc
      361 ggcccttgtc taggtcttgg cggccccgct aaggttacgg cccggtcgac ccctttggaa
      421 taacggcggc atggcgcagc tctggcaaac cctcatgtcc gtctgggcgt ggctcgtgct
      481 gggcgccgcc ctggtcctct ggctccccgt catgggactg ctccgcctgg cgacgctgtc
      541 cgacccgggc cgctacgccg tgggttacgt gttccgaagg atcggccccg tcatggcgac
      601 gctcaatccg ctgtggcgct tccgcacctc gggcacgccg ccggccgacc cgcgccggcc
      661 ctacgtcgtc gtctcgaacc acgaatcctt cgccgacatc cttctcatca gccatctgcc
      721 ctgggagatg aagtggctct ccaaggccga gctgttcagg atcccggtcc tcggttggct
      781 catgcgcctc gccggcgaca tcccggtccg ccggggcgag gggcgaagcg cggtcgaagc
      841 gctccagcgt tgccgcgagg tcctcaagaa ccgggtctcc gtcatgatct tccccgaggg
      901 gacccggtcg atgacggagg acatgctccc gttcaaggac ggcgcgtttc gcctggcgat
      961 ccagtccggc gtgccgatcc tgccgctggc cgtgagcggc accggcaccg cgctcaggaa
     1021 gcacgactgg cgcttcggcc gctcggtcgc cgaagtccgt gtgctggaac cggtcgagac
     1081 cacggggctc acggtgaagg acgtcccggc gctccgggac cgcgtccgcc agcagatcct
     1141 cgacgcgcgt gacgcgcttc ggcgggagca cggctgatcc gggtcatgcg tccttcgcca
     1201 agcccgccgg ggcctccact cgccccaccg cgcctgccag cgccagcagc gtgagcacgt
     1261 agggcagcat caggaagaac tggtacggca ccgccagccc gagtga
//
LOCUS       DATIFF010000792         1128 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2101275, whole genome shotgun sequence.
ACCESSION   DATIFF010000792 DATIFF010000000
VERSION     DATIFF010000792.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2101275"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..927
                     /locus_tag="VLD58_11525"
     CDS             <1..927
                     /locus_tag="VLD58_11525"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSB54983.1"
                     /translation="GSKQSVFNACFTLFGPKDKVLIPSPAWVSYPQIVHLCRAEPVLV
                     PGDPEWGLKVSVKDLEQRTDKLVKGLILCSPCNPTGATYSATEIRAIAEWARANGVWV
                     IADEIYRRIYYGDGPAPSFLDLPDEYLERVVLIYGASKAYAMTGWRIGSAYAPMPIAK
                     AMAALQSQTTTGANHPAQWAAATAFTDERVEQDVARMVAAFRRRRDRVVGRFRNDVPG
                     VEFVEPTGAFYFFFRVDGVTPGHDYTGTAFCAEAMTAGVALVPGAAFGDDRWVRMSYA
                     ASDKELETALDRLMALITRLGATKPAPARQTA"
BASE COUNT          171 a          383 c          395 g          179 t
ORIGIN      
        1 gggtccaagc agtcggtctt caacgcctgc ttcacgctgt tcggcccgaa ggacaaggtg
       61 ctgattccgt ctccggcctg ggtgtcctat ccccagatcg tgcacctgtg ccgggccgag
      121 ccggtgctgg tccccggcga cccggagtgg ggcctcaagg tgagcgtgaa ggacctggag
      181 cagcgcaccg acaagctggt gaaggggctg atcctgtgct cgccctgcaa tcccacgggg
      241 gcgacctaca gcgccaccga gatccgcgcc attgccgagt gggccagggc caacggggtg
      301 tgggtcatcg ccgacgagat ctaccggcgg atctactacg gcgacggtcc cgccccctcg
      361 ttcctcgatc tgccggacga gtatctcgag cgggtcgtgc tgatctacgg ggcctccaag
      421 gcctatgcca tgaccggctg gcgcatcggg tctgcctacg ccccgatgcc gatcgccaag
      481 gcgatggcgg ccctccagtc gcagaccacg accggggcca accatcccgc ccagtgggcg
      541 gcggcgaccg cattcacgga cgagcgggtg gaacaggacg tggcccgcat ggtcgccgcg
      601 ttccgccgtc ggcgggaccg ggtggtgggg cgcttccgga acgacgtgcc gggtgtggag
      661 ttcgtcgagc cgaccggcgc attctacttc ttcttccggg tggacggtgt caccccgggg
      721 cacgactaca ccggcaccgc cttctgcgcc gaggcaatga cggcgggcgt ggcgctggtg
      781 ccgggtgcgg cgttcggcga tgatcgctgg gttcggatga gctacgccgc aagcgacaag
      841 gaactggaga cggcgctgga ccggctcatg gcgctcatca cccggctggg cgcgacgaag
      901 cccgccccgg ctcgacagac tgcgtgagtg aacgggacca gggtgaccgg cgggcgtgac
      961 tcgcgccgcc cgtcgccctc cttacctccc gatccctgat cgctacggac tgcaatcgaa
     1021 tcctgatggc cacgacgacc tggacccgcc tccggcgtgc ggtggcggcc tgcggtttta
     1081 ctccagcaac ctggattcct gccgccagcg aagggcgcgc cgaagagg
//
LOCUS       DATIFF010000793         2138 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1178990, whole genome shotgun sequence.
ACCESSION   DATIFF010000793 DATIFF010000000
VERSION     DATIFF010000793.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2138
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1178990"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1066)
                     /locus_tag="VLD58_11530"
     CDS             complement(<1..1066)
                     /locus_tag="VLD58_11530"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSB54984.1"
                     /translation="MAGIRLTFWGAAGQVTGSMHLIEAAGARVLLDAGLFQGHRAPTR
                     ELNANLPFDPRRVDAIVLSHAHIDHSGRIPLLVSRGFHGPVYSTPATRDLSAVMLADA
                     AHVQEKDFEYLSRHGRAGPASEPLYRMADAVAVQDLTIGLPYRRMLHLRKYLTLEFSD
                     AGHILGSASVDLRLSEPAAHRLVFSGDIGRTGLPIIRDPSPPEGPIDTLVVESTYADR
                     THESVGDAKQRLGELVRQVAARGGKVLVPAFALGRAQELVYSLHQLWRAKAIPEIPIF
                     VDSPLAVDVTAVFRLHPEVFDSTEPLLGGGGSVFDFPLLRYVRDVEDSKRLNTLAGPA
                     VIIAAAGMAESGRILHHLANY"
     gene            complement(1066..1710)
                     /gene="upp"
                     /locus_tag="VLD58_11535"
     CDS             complement(1066..1710)
                     /gene="upp"
                     /locus_tag="VLD58_11535"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HSB54985.1"
                     /translation="MATAAHPNLTVLAHPLIQHKLTLLRDRRTSTRDFKQLVSEIAML
                     MAYEVTKDLATQPVEIETPLERMTGRQVAGKKLTLVPILRAGLGMVDGVAQLVPSARV
                     GHIGLARDEATLRPTDYYFKIPGDEEARDFFVLDPMLATGGSAVAAVRTLKDAGARRI
                     RFLCLVAAPEGVRAMERAHPDVPVFAAALDRGLNDRGFILPGLGDAGDRLFGTR"
     gene            complement(1754..2005)
                     /locus_tag="VLD58_11540"
     CDS             complement(1754..2005)
                     /locus_tag="VLD58_11540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54986.1"
                     /translation="MLLAAPGWKINARVKPVLESADGALLRFDAPRLTPDSAYFAEPP
                     AVFVPARDGRPLRGTLRASVCAAGEAVCRLVTMRVDARS"
BASE COUNT          356 a          711 c          781 g          290 t
ORIGIN      
        1 cgtaattggc cagatggtgg aggatccggc ccgactccgc catcccggca gccgcgatga
       61 tgacggccgg tcccgccagg gtattcagcc gcttcgagtc ctcgacgtcg cggacatagc
      121 gcaggagcgg aaagtcgaac accgagccgc cgcccccgag cagcggctcg gtggagtcga
      181 acacctcggg atggagccgg aagacggccg tgacatcgac ggccagcggg ctgtcgacga
      241 agatcgggat ctccgggatc gccttcgcgc gccacagctg atgaaggctg tacaccagct
      301 cctgcgcgcg tccgagggcg aaggccggca ccaggacctt gccaccccgt gccgctacct
      361 gccggaccag ctcgcccagc cgctgcttcg cgtcgcccac cgactcgtgc gtgcgatcgg
      421 cgtaggtgga ctccacgacg agggtgtcga tcgggccctc gggcgggctc gggtcacgga
      481 tgatcggcag gccggtgcgg ccgatgtcgc cggagaagac gagccggtgg gccgccggct
      541 cgctaagtcg gaggtccacc gacgccgagc cgaggatgtg gccggcgtcg gagaactcca
      601 gcgtgagata cttgcgcagg tggagcatgc gccggtaggg gaggccgatc gtgagatcct
      661 gcaccgccac cgcgtcggcc atccggtaga gcggctcgct cgcgggcccc gcccggccgt
      721 ggcgcgagag atactcgaag tccttctcct gcacatgggc cgcgtcggcc aacatcaccg
      781 cagagaggtc ccgcgtggcc ggtgtggagt agaccgggcc gtggaacccc cggctcacca
      841 ggaggggaat gcgtccggag tgatcgatgt gcgcatggct caagacgatc gcgtccacgc
      901 gacggggatc gaagggcagg ttggcgttga gctcccgggt cggtgcgcga tggccctgga
      961 agaggccggc atcgagcagc acgcgcgccc cggccgcctc gatcaagtgc atcgagccgg
     1021 taacctggcc ggcggcgccc cagaacgtca atcggatgcc ggccatcagc gggtgccgaa
     1081 cagccggtcg ccggcgtcac ccaagccggg gagaatgaac cctctgtcgt tgagcccgcg
     1141 atccagcgcg gcggcaaaga ccgggacatc cgggtgggcc cgctccatgg cgcgcacccc
     1201 ttcgggtgcg gcgacgaggc acaggaagcg tatgcgacgc gccccggcat ccttgagcgt
     1261 ccgcacggcg gccacggcgg accccccggt ggcgagcatc gggtccagga caaagaaatc
     1321 ccgcgcttct tcgtcacccg ggatcttgaa gtagtagtcg gtggggcgaa gcgtggcttc
     1381 gtctcgtgcg agcccgatgt ggcccacgcg ggcggacggc accagctgcg ccacgccgtc
     1441 caccatcccg agaccggcgc ggaggatggg gaccagcgtc agcttcttcc cggccacctg
     1501 ccgacccgtc atccgctcga gcggagtctc gatctccacc ggctgggtag cgaggtcctt
     1561 cgtgacctcg tacgccatca gcatggcgat ctcgctgacg agctgcttga agtcgcgggt
     1621 gctggtccgc ctgtcgcgga ggagggtgag cttgtgctga atgagggggt gcgccaggac
     1681 ggtcaggttg ggatgggccg ctgtcgccat ggccccaata tgacggaggg agggagaagt
     1741 gagaagtgag agctcagctc ctcgcgtcca cgcgcatggt taccagccga cataccgcct
     1801 cgcccgccgc gcacacgctc gcgcgaaggg tgccgcggag cgggcggccg tcacgcgcgg
     1861 ggacgaacac agccggcggc tcggcgaaat acgcggagtc gggcgtgaga cgtggcgcgt
     1921 cgaaacgcag gagagcgccg tccgcggact cgagcaccgg tttcacccgg gcgttgatct
     1981 tccagcccgg tgcggccagg agcaccagac gaaaagagtg gccggccggc acggtccgaa
     2041 ccgcgagcgg ccgggcggcg tcggggtcac gcgcgggctc gcgggcgcag cctgcggcca
     2101 ggaagagcgc aaggcccgca atcctcttca ctggtcac
//
LOCUS       DATIFF010000794         1047 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_563015, whole genome shotgun sequence.
ACCESSION   DATIFF010000794 DATIFF010000000
VERSION     DATIFF010000794.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_563015"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..768
                     /gene="rapZ"
                     /locus_tag="VLD58_11545"
     CDS             <1..768
                     /gene="rapZ"
                     /locus_tag="VLD58_11545"
                     /inference="COORDINATES: protein motif:HMM:NF015620.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HSB54987.1"
                     /translation="NLPLPLLRQFLDNPLELAGGTDRIAVVTDVRAPGFAEEFPRLFA
                     EIDRERIEPRLLFLEASDEVLVRRFSETRRPHPLAADLPVIEGIRREREVLAELRARA
                     DMVLETSGWSIHEIRSQIYREFASNPGEEPGMVVSLVSFGFKHGIPYGTDLLFDVRFL
                     PNPHFVPGLREQTGQDEGVQSYLDRQPDFGELVGRLSDLLAYLLPRYRRENRSYLSVA
                     IGCTGGRHRSVAVAERLKAALEEQGWPARVIHRDISR"
     gene            842..>1047
                     /locus_tag="VLD58_11550"
     CDS             842..>1047
                     /locus_tag="VLD58_11550"
                     /inference="COORDINATES: protein motif:HMM:NF015567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54988.1"
                     /translation="MIGKLILTHGGLARELLAAANVISGSLNGFEALSLDWSDGFDEA
                     RSKVATALEHLDQGQGVLILTDMYG"
BASE COUNT          162 a          344 c          381 g          160 t
ORIGIN      
        1 aacctcccgc tgccgctgct gcgccagttc ctcgacaacc cgctggagct ggccgggggg
       61 accgaccgca tcgccgtggt caccgacgtg cgcgcccccg gcttcgccga ggaattcccg
      121 cgcctgttcg ccgagatcga ccgcgagcgg atcgagccgc ggctgctctt cctcgaagcg
      181 tcggacgagg tgctggtgcg ccgcttctcc gagacccggc gcccccatcc gctggccgcc
      241 gacctcccgg tgatcgaggg gatccgccgc gagcgggagg tgctggccga gctgcgggcc
      301 cgcgccgaca tggtgctcga gaccagcggc tggtcgatcc acgagatccg cagccagatc
      361 taccgcgagt tcgccagcaa ccccggcgag gagccgggaa tggtagtctc cctggtaagc
      421 ttcggcttca agcacggcat tccgtacggc accgacctgc tgttcgacgt gcgcttcctg
      481 cccaacccgc acttcgtgcc ggggctgcgc gagcagacgg ggcaggacga gggggtgcag
      541 tcgtacctgg accggcagcc ggacttcggc gagctggtgg ggcggctcag cgatctcctg
      601 gcgtatttac tgccgcgtta ccgccgggag aaccggagct atctctcggt ggcgatcggc
      661 tgcacggggg ggcggcaccg gtcggtggcg gtggccgaaa ggctgaaggc ggcgctggag
      721 gagcaggggt ggccggcgcg ggtgatccac cgggacatct cccgctaggg tggcccgaca
      781 ggcggaaagg aatcggaagc ccggaaagcg ggttaccagt caagggatac tgtttgagaa
      841 gatgatcggc aaattgatcc ttacccacgg tggcctcgcc cgggagctgc tggccgcggc
      901 caacgtgatc tcgggctccc tgaacggctt cgaggcgctg tcgctcgact ggagcgacgg
      961 cttcgacgag gcgcggtcca aggtggccac ggccctggag cacctggacc aggggcaggg
     1021 ggtgctcatc ctcaccgaca tgtacgg
//
LOCUS       DATIFF010000795         1129 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_408282, whole genome shotgun sequence.
ACCESSION   DATIFF010000795 DATIFF010000000
VERSION     DATIFF010000795.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_408282"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..850
                     /locus_tag="VLD58_11555"
     CDS             <1..850
                     /locus_tag="VLD58_11555"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HSB54989.1"
                     /translation="TWAVRPAPAVLLGRWDAWFQSGFDQSPRVLAFSNGDGGLEGTII
                     SNSGDYGQFWGGMEGDSFAMAHFDGSYVYLLEGRLDGDTLRGTFHAGLRSQTPFFAVR
                     STGRPHLSLPTAITRADTASPFRFRFPDLEGRTVSSDDARFRGKVVLIDIFGSWCPTC
                     HDAAPALVELYRRYHSRGLEVVGLAFEVTGDTAADAPLVRRYRDKFRLPFPLLLGGVS
                     DVEAVSAALPQLDGFTAFPTSIFLGRDGRVRRIHAGFYGPAMGAQHEALVADFRREIE
                     RLLREK"
     gene            complement(884..>1129)
                     /locus_tag="VLD58_11560"
     CDS             complement(884..>1129)
                     /locus_tag="VLD58_11560"
                     /inference="COORDINATES: protein motif:HMM:NF018257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfocyanin-like copper-binding protein"
                     /protein_id="HSB54990.1"
                     /translation="LVVMAEREKLPLEGGRPALDNAMSRAVVAGLAAGQRDLTTFTTD
                     QPGWYWMLCGVPGHALRGEWIGLKVDREATLPSVVSK"
BASE COUNT          162 a          402 c          385 g          180 t
ORIGIN      
        1 aacctgggcg gtccggcccg cgccggcggt actgctgggc cgctgggatg cctggttcca
       61 gagcggattc gaccagagcc cccgggtgct cgccttcagc aacggggacg gcgggctgga
      121 gggcaccatc atctccaact cgggcgatta cggacagttc tggggaggga tggagggcga
      181 cagcttcgcc atggcgcatt tcgatggctc gtacgtctac ctgctggaag gccggctgga
      241 cggcgacacg ctccgcggta ccttccacgc ggggctcagg agtcagacac cgttcttcgc
      301 cgtgcggagc acaggacgac cgcacctgag cctacccacc gccatcaccc gggccgacac
      361 cgccagcccg ttccgctttc ggttccccga cctcgagggg aggacggtca gttccgacga
      421 cgcccgcttc cgggggaagg tggtcctcat cgacatcttc ggcagctggt gcccgacctg
      481 tcacgatgcg gcgccggccc tggtcgagct gtaccgtcgc taccactccc gagggctcga
      541 ggtcgtcggc ctcgccttcg aagtcaccgg cgacaccgcg gcggatgctc cgctggtccg
      601 ccgctatcgc gacaagttca ggctgccctt ccccctgctg ctcggtggcg tgagcgatgt
      661 ggaggcggtg agcgccgcgc tcccccagct cgacggcttc accgccttcc cgacgagcat
      721 cttccttgga agagatgggc gggtgcggcg gattcacgcg gggttctacg ggccggcgat
      781 gggagcgcag catgaggcgc tggtcgccga tttcaggcgg gagatcgagc ggctgctgcg
      841 cgagaagtag cggggagtcg ctcccccgct cagctgccgt gcctcacttg ctgaccaccg
      901 acggcagcgt cgcctcccgg tcgaccttga gcccgatcca ctcgccgcgg agcgcgtggc
      961 cgggcacccc gcacaacatc cagtaccacc cgggctgatc cgtggtgaag gtggtcaggt
     1021 cgcgctgacc ggcggccagg ccggccacca cagcgcgact catggcgttg tcgagcgcgg
     1081 gccggccgcc ctccagcggc agcttctccc gctccgccat caccacgag
//
LOCUS       DATIFF010000796         4035 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_563049, whole genome shotgun sequence.
ACCESSION   DATIFF010000796 DATIFF010000000
VERSION     DATIFF010000796.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4035
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_563049"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..427
                     /locus_tag="VLD58_11565"
     CDS             <1..427
                     /locus_tag="VLD58_11565"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HSB54991.1"
                     /translation="PISGEFQRTFEEQRFGLPFDDAIIAMADRVNLVDVRILVTAILI
                     QREVGGNLAEVLDNLASVIRARFTIRRQLRVYTAQGRFTGYTLAVLPIIVGSVIYMLN
                     PPYMKLLFTHPMGKLMVAVAAVMQVIGYLWIRKIVDIEI"
     gene            435..1364
                     /locus_tag="VLD58_11570"
     CDS             435..1364
                     /locus_tag="VLD58_11570"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HSB54992.1"
                     /translation="MILVVAVALVALSVTFAVLFLGEMAPGRQSAVGARLAELEGADP
                     QAAETIRKRRRQLRAEKMAALLQALGERLEPGRKDIPAIRLRMLQAGFPSPSAVPIFL
                     GSRVALPIAMGFSAVTILGFLGMTSFAGLIGTAWFAALGYIAPSVYVNGRIRSRQKEM
                     QKALPDALDLLVVCVEAGLGLNQAMVRVSEEIERLSPVLSEQLALVNLEIRAGTAREE
                     AFRNMGERTGLDDIKSLMAMLIQTDRFGTSIAQALRVQADTLRTKRRQRAEEAAAKTT
                     IKLVFPLVLFIFPAMFVVILGSALIQIFEALGR"
     gene            1367..1729
                     /locus_tag="VLD58_11575"
     CDS             1367..1729
                     /locus_tag="VLD58_11575"
                     /inference="COORDINATES: protein motif:HMM:NF014678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HSB54993.1"
                     /translation="MRVVRALNRRGPVLGDRIGVADRWWPRFRGLLGRAALEPGEGLL
                     LEPCRAVHMLGMRFALDVAFLDREGVVVAAYPNLRPGARTGWHRRATRALELPAGTLA
                     ASGTREGDQIVCTEEARP"
     gene            1726..3075
                     /locus_tag="VLD58_11580"
     CDS             1726..3075
                     /locus_tag="VLD58_11580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54994.1"
                     /translation="MTASTAPAAPPAPAGEPTRPPLPETLADTGLPTEFVVDLLLKAL
                     YVQGARTGQQLMETIKLPFPFVDDQLLSLQQRRMVEVRGTSGAGRGGYMFDLTGEGRT
                     RAREALESSQYVGPAPVPLKQYREWTYRQSISRVHVARDTVRTGFRNMVIADPILEML
                     GPAINSAKSLFLYGGPGNGKTLIAETISRLLGGALFIPYAIEVDGQILVLYDPVYHHE
                     VKEPEPEATGDEPAWLKSLPEHDRRYVMVERPVVITGGELTLDQLDLQYDTYTKMYQA
                     PFQLKANGGVLILDDFGRQRTPPRDLLNRWIVPLEKRIDFLTLHTGGKFPVPFDTLLI
                     FSTNLSPHELVEEAFLRRIHYKLHVFGPTQAEYTEIFRRCCAEREIEYEDWAVPHLYK
                     EYYGRRKIIPRNCHPRDVLDHFLDMVRYLEVAPRLTPDLVDRACNSYFLDAPQEASA"
     gene            3072..3776
                     /locus_tag="VLD58_11585"
     CDS             3072..3776
                     /locus_tag="VLD58_11585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54995.1"
                     /translation="MSGTPAPDAARSEEHARHRPEVVFLHRLEALERENRRLRRYSTY
                     AFMGLAILLGLIVALVWLSGRQGAPGTVADQVAARQFILRDKTGAIRGAWGLGDDGAV
                     RLALQDPAGRPRVKVSLLQDGTSGLSFADSAGHPRAVFALLPDQTGSVAFADEGGRTR
                     SVLGISADGSANIVFADRTGATRAGLGVDEAGHSTFTLADRMGDSGAPVTESVGGEAT
                     DSQPAAKGQQPPKRKR"
BASE COUNT          613 a         1369 c         1413 g          640 t
ORIGIN      
        1 acccatctcg ggcgagttcc agcgcacgtt cgaggagcag cggttcggcc tcccgttcga
       61 cgatgccatt atcgcgatgg ccgaccgggt gaacctggtg gacgtccgca tcctggtgac
      121 tgccattctt atccagcggg aggtcggcgg taacctggcc gaggtgctcg acaacctcgc
      181 cagcgtgatc cgggcccggt tcactatccg gcgtcaactc cgggtataca cggcgcaggg
      241 gcggttcacg ggctacacgc tggccgtgct cccgatcatc gtgggctcgg tgatctacat
      301 gctcaatccg ccctacatga agctgctgtt cactcacccc atgggcaagc tgatggtggc
      361 ggttgccgcc gtcatgcagg tgatcggcta tctctggatc cgcaagatcg tggacatcga
      421 gatctgaggc ctctgtgatc ctcgtcgtcg ccgtcgcgct cgtcgctctc tcggtcacct
      481 ttgccgttct gttcctgggc gagatggctc cggggcggca gagcgccgtg ggcgccaggc
      541 tggcggagct agagggcgcc gatccccaag ccgccgagac gatccgcaag cgccgccggc
      601 agctccgagc cgaaaagatg gccgcgctgc tgcaggcctt gggcgagcgg ctcgagccgg
      661 gccggaaaga cattccggcc atccggctcc ggatgctcca ggccgggttc ccgagcccgt
      721 cggcggtgcc gatatttttg ggctctcgcg tcgcgctccc gatcgccatg ggcttcagcg
      781 cggtgacgat cctcggcttc ctcgggatga cgagctttgc gggcctgatc gggactgcct
      841 ggttcgcagc gttggggtac atcgcgccgt cggtctatgt gaacgggcgg atccgctccc
      901 gccagaagga aatgcagaag gccctgccgg atgcgctgga tctgctggtg gtctgcgtgg
      961 aggccggact agggctcaac caggccatgg tgcgggtgtc ggaggagatc gagcggctga
     1021 gcccggtgct gagcgagcag ctcgctctgg tgaacctcga gattcgggcg ggaacggccc
     1081 gggaggaagc gttccgcaac atgggggagc gcactgggct cgacgacatc aagtcgctga
     1141 tggcgatgct gatccagacc gaccgcttcg gcacctcgat cgctcaggcg ctccgggtgc
     1201 aggcggacac gctccgcacc aagcggcggc agcgggccga agaggccgcg gcgaagacga
     1261 ccatcaagct ggtcttcccc ctggtcctct tcatcttccc ggccatgttc gtggtgatcc
     1321 tgggctcggc gctcatccag atcttcgagg ccctcgggcg ctagcgatgc gcgtcgtgcg
     1381 ggccttgaac cgccgggggc cagtcctcgg cgaccggatc ggggtggccg accggtggtg
     1441 gccccggttc cggggcctcc tgggccgggc ggccctggag ccgggcgagg ggctgctgct
     1501 ggagccgtgc cgggcggtgc acatgctggg gatgcggttc gcgctcgacg tcgcgttcct
     1561 tgatcgggaa ggcgtcgtgg tcgccgcgta tccgaacctg cgccccggcg cccggaccgg
     1621 gtggcaccgc cgagcaaccc gcgcactgga gttgccggcc gggacgctgg ccgccagcgg
     1681 cacgcgcgag ggggaccaga tcgtctgtac cgaggaggca cgcccatgac cgcgagtacc
     1741 gcgcccgccg cgccgccggc accggccggc gaaccgaccc gcccgccgct tcccgagacc
     1801 ctcgcggaca ccgggctgcc gaccgagttc gtcgtagacc tgctgctaaa ggcgctgtac
     1861 gtgcagggcg cgcggaccgg gcagcagctg atggagacga tcaagctgcc gttcccgttc
     1921 gtggacgacc agctcctctc cctccagcag cggcgcatgg tcgaggtgcg cggaacgagc
     1981 ggcgccggcc gcggcggata catgttcgac ctgaccggcg agggccgcac ccgcgcccgc
     2041 gaggcgctcg agtcgagtca gtacgtcggc ccggcgccgg tcccgctcaa gcagtaccgg
     2101 gagtggactt accgccagtc gatctcccgg gtgcacgtgg cccgggatac ggtccgcacc
     2161 ggtttccgca acatggtgat tgccgatccc atcctcgaga tgctgggccc ggccatcaac
     2221 tctgccaagt ccctctttct gtacggcggg ccgggcaacg gcaagacgct catcgccgag
     2281 acgatctccc gtctcctggg cggcgcgctc ttcatcccgt acgccatcga ggtggatggc
     2341 cagatcctag tgctctacga cccggtctac caccacgagg tgaaagagcc cgagcccgag
     2401 gccacgggcg acgagccggc ctggctcaag agcctgccgg aacacgaccg ccgctacgtg
     2461 atggtggagc ggccggtggt tatcaccggc ggcgagctga cgctggacca gctcgacctg
     2521 cagtacgaca cctacacgaa gatgtaccag gcgccgttcc agctgaaggc taatgggggc
     2581 gtgctgatcc tcgacgactt cggccgccag cggacccccc cccgagacct gctcaaccgc
     2641 tggatcgtgc cgctggagaa gcggatcgac ttcctcaccc tccacacggg cggcaagttc
     2701 ccggtgccgt tcgacacgct gctgatcttc tccaccaacc tctcgcccca cgagctggtc
     2761 gaggaagcgt tcctgcgccg gattcactac aagctgcacg tgttcgggcc gacccaggcg
     2821 gagtacaccg agatcttccg ccgctgctgc gccgagcgcg agatcgaata cgaggactgg
     2881 gcggtgccgc acctgtacaa ggagtactac ggtcgccgca agatcatccc gcggaactgt
     2941 cacccgcgcg acgtgctgga ccacttcctg gacatggtcc ggtatctcga ggttgcgccg
     3001 cggctgaccc ccgatctggt ggaccgggca tgcaactcct acttcctcga cgcgccccag
     3061 gaggcttcag cgtgagcggc acgccagcgc ccgatgcggc gcgttccgag gagcatgcgc
     3121 ggcaccgccc agaggtggtg ttcctccacc ggctggaggc gctcgagcgg gagaaccggc
     3181 ggctccgccg ctacagcacc tacgcgttca tgggcctggc gatcctgctg ggcctgatcg
     3241 tggcgctggt gtggctgagc ggccggcagg gcgcacccgg caccgtcgcc gaccaggtgg
     3301 ccgcccgcca gttcatcctg cgggacaaga ccggcgccat ccgcggggcc tgggggctgg
     3361 gcgacgacgg cgcggtgcgg ctcgcgctgc aggacccggc cggccggccc cgggtcaagg
     3421 tgagcctgct gcaggacggc acgtcgggtc tctcgttcgc ggactcggcc ggacacccgc
     3481 gagccgtctt cgcgctgctg ccggaccaga cggggtcggt ggccttcgcg gacgaggggg
     3541 ggaggacgcg gagcgtgctc gggatctcgg ccgacgggtc cgcgaacatc gtctttgccg
     3601 accggacggg cgcgacccgg gcgggcctcg gcgtggacga ggccggccac agcaccttca
     3661 cgctggccga ccggatgggc gactcggggg caccggtcac cgagagcgtc gggggagagg
     3721 cgacggattc ccagccggcc gcaaaggggc agcaaccgcc caagcgcaag cgctgaaacc
     3781 tgttcggcgc agacgctggc caagggccgg cggacctcag ggtccggccg gtcctttttg
     3841 atgtaaattg gcggaccagc atagtcgagg atactcgaga tgtaccgatc aacctcactt
     3901 cttacactcg ggctgggcgc ctgcgcggcc gtggtctggg cctgcgccgt caatcccgtc
     3961 accggcaaga gcgagctctc cctggtgtcc gagtctcagg agatcgagat gggccgggag
     4021 aacgcgcagc gcgtc
//
LOCUS       DATIFF010000797         1217 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2254982, whole genome shotgun sequence.
ACCESSION   DATIFF010000797 DATIFF010000000
VERSION     DATIFF010000797.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1217
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2254982"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..945)
                     /locus_tag="VLD58_11590"
     CDS             complement(<1..945)
                     /locus_tag="VLD58_11590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54996.1"
                     /translation="MSDSIPGPEASFGELLGRLIQLVRQGASEDAAVQPAVDQLAARV
                     ARQDALIEAGIENSWAVDGDALKERLQARRVDAILVAAGADPVELLALVRALADDQAP
                     IPSTTRVRVSLLPGQLPLSYSGPRDIIPKAAPTGENRTRAADQLATMVDGILRELEKA
                     ISRNQWLAALHDAQAAARFVAGMPEDSRRMYAIALKRHLTRPVVDALIEQAYRSPEEQ
                     HRTAEVLRLAGFQAVERMVEILKQSDTVGPRAFLVEALGGMPEVEPLVVPLLKSRRGI
                     EAWLGAELAGRLHLAEAIPALTVQVEHPEERVRQAAIAA"
BASE COUNT          176 a          442 c          406 g          193 t
ORIGIN      
        1 cgccgcgatc gccgcctgac gaacccgctc ctccgggtgc tccacctgca ccgtcagcgc
       61 cggaatcgcc tcggcgaggt gcagccggcc tgcgagctcc gcgccgagcc acgcctcgat
      121 cccgcgccgg ctcttgagga gcggtaccac cagcggctcc acctccggca ttcccccgag
      181 ggcttccacc aggaaggcgc gggggcccac ggtgtcgctc tgcttgagga tctccaccat
      241 ccgctccacg gcctggaaac ccgccagcct gagcacctcc gcggtgcggt gctgttcctc
      301 gggactgcgg taggcctgct cgatcagcgc atccaccacc gggcgcgtga ggtggcgctt
      361 gagggcgatg gcgtacatcc gccgagaatc ctccggcatc cccgccacga agcgggccgc
      421 ggcctgcgca tcgtgcagcg ccgccagcca ctggttccgg ctgatcgcct tctccagctc
      481 gcgcaggatc ccgtccacca tggtggcaag ctggtcggcg gcgcgggtac gattctcacc
      541 ggtgggcgcg gccttgggga tgatgtcccg cgggccggag tagctgagcg ggagctgccc
      601 cggaaggaga ctcactcgca cgcgggtggt gctggggatg ggggcctggt catccgcgag
      661 ggcgcgcacc agggccagaa gctcgaccgg atcggcgccc gccgccacca ggatcgcgtc
      721 cacccggcgg gcctgcagac gttccttgag ggcatcaccg tccaccgccc agctgttctc
      781 gatgcccgcc tcgatcagtg catcctgccg ggccacccgg gcggcgagct ggtctaccgc
      841 gggttgtacc gccgcgtcct ccgacgcacc ctggcggacc agctggatca gccgccccag
      901 cagctcgccg aacgaggcct cggggccggg aatggagtcg gacatgggga tgagtatact
      961 tgccggagcc ttgcttgaca gcgcctgccg ggccccgtat ataccctcga cccggggagg
     1021 ttgaccggga acccctgtcc cgacaatgat cgatccatga agcttgcccg gacgcccgat
     1081 cgcaataatc tgaaccgatc ggcgatcggg gcggagcgat agcgttttgg cggtcttgca
     1141 gacgcgaatc ggcccgctcc cgtcggagcg ggccggtctt tttggtggtt cccggttccc
     1201 agtacccttc aacactc
//
LOCUS       DATIFF010000798         1296 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_716689, whole genome shotgun sequence.
ACCESSION   DATIFF010000798 DATIFF010000000
VERSION     DATIFF010000798.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_716689"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..342
                     /locus_tag="VLD58_11595"
     CDS             <1..342
                     /locus_tag="VLD58_11595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB54997.1"
                     /translation="DVAVTRTVHTDCTVNFEGRTYSVPFVLCGRRVEVRGCAEVVQVL
                     HEGQIVAEHPRASHQRLLIDPAHYDGPGDDRVAPPVPLGRMGRRLQQILRQPVEQRPL
                     DLYAALAEVAR"
     gene            339..1112
                     /gene="istB"
                     /locus_tag="VLD58_11600"
     CDS             339..1112
                     /gene="istB"
                     /locus_tag="VLD58_11600"
                     /inference="COORDINATES: protein motif:HMM:NF013828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HSB54998.1"
                     /translation="MSKTPKAPPLEVDGTREKLLRLGLGHAAEALVAELTEAAQHDRS
                     AHQVLDRLLTLELSQRDERRIRTSLRLSGLPPGMTLGEFDFAFQPSVERRQIETLATC
                     AFIREHATLLIQGPPGVGKTHLCAGLGVKAIEHGFSVAFYVLEDLLHEMRKDAAVAPQ
                     RLRRKKYFNVSYLVVDEVGFEPMSREDASLFFRLVSYRYCRGSTAITTNKSVKGWPGI
                     FAGDEALAAAILDRLLHRSVVLNIRGRSYRLQELEKLLK"
BASE COUNT          203 a          414 c          476 g          203 t
ORIGIN      
        1 gacgtggcgg tgacccgcac cgtgcacacc gactgcacgg tgaacttcga gggccggacc
       61 tacagcgtgc cgtttgtgct ctgcggccgg cgtgtggagg tccggggctg tgccgaggtg
      121 gtccaggtcc tccatgaggg gcagatcgtg gccgaacacc cgcgggccag ccaccagcgg
      181 ctcctgatcg acccggccca ctacgacggg ccgggcgacg accgggttgc cccgccggtg
      241 ccgctgggcc ggatgggccg gcggctgcag cagatcctga ggcagccggt tgagcagcgg
      301 ccgctggacc tctacgccgc cttggcggag gtggcccgat gagcaagacc cccaaggcgc
      361 cgccgctgga ggtcgatggt acccgcgaga agctgttgcg gctgggtctg ggtcacgctg
      421 cggaggccct ggtcgcggag ctgaccgagg cggcccagca cgaccgctcg gcgcaccagg
      481 tcctggaccg gctgctgacg ctggagctga gccagcgtga cgagcggcgg atccggacct
      541 cgctgcggct ctccgggctg ccgccgggga tgaccctggg cgagttcgac ttcgccttcc
      601 agccgtcggt cgagcggcgt cagatcgaga ccctggcgac ctgcgcgttc atccgggagc
      661 acgccacgct gttgatccag gggcccccgg gagtcgggaa gacccattta tgtgctggat
      721 tgggagtcaa ggccattgag catggcttct cggtggcctt ctacgtcctg gaggacctgc
      781 tgcacgagat gcgcaaggac gcggccgtgg cgccgcagcg gctgcggcgc aagaagtact
      841 tcaacgtctc gtacctggtg gtcgacgagg tcggcttcga gccgatgagc cgcgaggatg
      901 ccagcctgtt cttccggctg gtgagctacc ggtactgccg tgggagcacg gcgatcacga
      961 cgaacaagag cgtgaagggt tggccgggga tcttcgccgg ggatgaggcg ctggcggcgg
     1021 cgatcctgga tcgcctgctg caccggagcg tggttctgaa catccgtggc cggagctacc
     1081 ggcttcagga gctcgagaag ttgctgaagt gaccggcccc gcccggcggc cccgaggggc
     1141 cgccttggcg accggatttc ggcccccgag ggggccgcat gggaagacaa acgtcgcccg
     1201 gccggctcgt aaaagatcgt gtcactcaac ctcgtagaag ttcgtgtcac ttgacatgtg
     1261 caccagccac cagccagcag aaatctgccc agggag
//
LOCUS       DATIFF010000799         1630 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1486732, whole genome shotgun sequence.
ACCESSION   DATIFF010000799 DATIFF010000000
VERSION     DATIFF010000799.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1630
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1486732"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..512
                     /locus_tag="VLD58_11605"
     CDS             <1..512
                     /locus_tag="VLD58_11605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HSB54999.1"
                     /translation="DLETIAAALTIAETGHLVLATLHTNSAAESINRIIDVFPHNQQS
                     QVRAQLAFVLEGVMTQTLLPKAKGRGRVMAAEIMVATPAIRALIRDEKIHQIYSAMQS
                     GKKFGMQTMNDSLYQLYTAREVTEDECLRVSGDPNEFLRMIGQRPMEEQDIPSVGEKP
                     LRAAGATRR"
     gene            531..>1630
                     /locus_tag="VLD58_11610"
     CDS             531..>1630
                     /locus_tag="VLD58_11610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HSB55000.1"
                     /translation="MPMYEYTARNAANGQIQKGQLDVPSQSEVSNYLRKNRLLLVSVR
                     EAPKQIKLSLPGAQRIKTRDVVIFTRQFATMINAGLPLVQSLTILAQQTENKALAEIT
                     RSVVYDVESGNTLADAFSKHPRAFSDLYVNMVAAGEAGGILDTILLRLATFLEKSDAL
                     MRKVKGALVYPGVIMSVAAIAIAVLLIFVIPVFQNLFASVNLDLPLPTRIVIGLSDIL
                     IGYWWAVLGTVGAIVFAIRRYYGTSGGRKTIDSLLLRAPVLGDLLRKSAVSRFTRTLG
                     NLISSGVSILEGLEITAKTAGNMVIHDAVMASRQSIAGGDTIAAPLEKSKVFPPMVIS
                     MIAVGEQTGGLDEMLTKIADFYDEEVDVAVGAL"
BASE COUNT          288 a          530 c          557 g          255 t
ORIGIN      
        1 gggatctcga gaccatcgcc gccgcgctca cgatcgcgga gaccggccac ctcgtgctcg
       61 ccacgctcca caccaactcg gcggcggagt cgatcaaccg gatcatcgac gtcttccccc
      121 acaaccagca gtcgcaggtg cgggcgcagc tcgccttcgt gctggagggc gtgatgaccc
      181 agacgctgct gccgaaggcc aagggccggg ggcgggtgat ggcggcggag atcatggtcg
      241 cgacgccggc catccgcgcg ctgatccggg acgagaagat ccaccagatc tactccgcca
      301 tgcagtcggg caagaagttc gggatgcaga cgatgaacga ctcgctgtac cagctgtaca
      361 cggcgcgcga ggtgacggag gacgagtgcc tccgggtctc gggcgacccg aatgagttcc
      421 tccggatgat cgggcagcgg ccgatggaag agcaggacat ccccagtgtg ggggagaagc
      481 cgctccgcgc cgccggcgcc acccgccgct aggaagaggg agaccgaccg atgccgatgt
      541 acgaatacac cgcgcgcaac gccgcgaacg ggcagatcca gaagggccag ctcgacgtgc
      601 cgagccagtc cgaggtcagc aactacctgc ggaagaaccg gctgctgctg gtgagcgtcc
      661 gcgaggcgcc caagcagatc aagctgtcgt tgcccggggc gcagcgaatc aagacccgcg
      721 acgtggtgat cttcacccgc cagttcgcga ccatgatcaa cgccgggttg ccgctggtcc
      781 agtcgctcac catcctggcc cagcagaccg agaacaaggc gctcgcggag atcacccggt
      841 cggtggtcta cgacgtcgag tccggcaaca cgctggcgga cgcgttcagc aagcacccgc
      901 gggcattcag cgacctctac gtcaacatgg tggcggcggg cgaggccggc ggcattctgg
      961 acacgattct gctgcgcctg gcgaccttcc tcgagaagag cgacgcgctg atgcggaagg
     1021 tgaagggcgc gctggtctac ccgggcgtga tcatgagtgt ggccgcgatc gcgattgcgg
     1081 tgctgctcat cttcgtgatc ccggtcttcc agaacctgtt cgcgtcggtg aacctggatc
     1141 tgccgcttcc gacccggatc gtgatcggcc tgtcggatat cctgatcggc tattggtggg
     1201 cggtgctggg cacggtgggg gccatcgtct tcgccatccg gcgctactac ggcacgtccg
     1261 gcgggcgcaa gactatcgac tcgctgctgc tccgcgcccc ggtgctgggc gacctcctgc
     1321 ggaagtcggc ggtctcccgc ttcacccgga cgctgggcaa ccttatctcc tccggcgtct
     1381 cgatcctcga ggggctcgag atcaccgcca agacggcggg caacatggtc atccacgacg
     1441 cggtcatggc gtcccggcag tcgatcgccg gcggcgatac gatcgccgcc ccgctggaga
     1501 agtcgaaggt gttcccgccg atggtgatct ccatgatcgc ggtgggcgaa cagaccggcg
     1561 gcctggacga gatgctgacc aagatcgcgg acttctacga cgaagaggtg gacgtggcgg
     1621 tgggcgcgct
//
LOCUS       DATIFF010000800         1296 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2101973, whole genome shotgun sequence.
ACCESSION   DATIFF010000800 DATIFF010000000
VERSION     DATIFF010000800.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2101973"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..200)
                     /locus_tag="VLD58_11615"
     CDS             complement(<1..200)
                     /locus_tag="VLD58_11615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55001.1"
                     /translation="MHGRRLSRGLRREPQCPRLDPNVAPAPARRYPLLAPTSAIRLMP
                     SLPFRLKVPKRDEVTLAGISST"
     gene            195..890
                     /locus_tag="VLD58_11620"
     CDS             195..890
                     /locus_tag="VLD58_11620"
                     /EC_number="1.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016646 - oxidoreductase activity, acting
                     on the CH-NH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HSB55002.1"
                     /translation="MHVTIDPAILYFGTPVVLVSTTNPDGSPNLAPMSSAWWLGRSAV
                     LGFGARSHTPANLLRTRECVLNLPSVDQVAAVNRLARTTGSSPVPPHKVAMGYRHEKD
                     KFGVAGLTRVDSTIVTPPRVAECPVQLEAVLEGSFGLAESDPDRRGKLVALEVRVVRV
                     HVDPRIRMAGYEHRIDPRRWRPLIMNFCEFFGLGDVLHHSTLAEIPEDAYRPPVTAPV
                     SPAVQAAANGVAR"
     gene            complement(835..>1296)
                     /locus_tag="VLD58_11625"
     CDS             complement(835..>1296)
                     /locus_tag="VLD58_11625"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSB55003.1"
                     /translation="IDDLVTLENGRGERLRVYATPARHGPAGGDRGPVIGFLLRWVDD
                     TGHGLYLTGDSVWYEDLETIRALGPVRAVIAFAGAAKVKVAGDQPLTLTADGTVELAR
                     LFAPAPIVPVHYEGWEHFTESRADLEHAFRAAGLSEQLRWLPPGRPVTLAP"
BASE COUNT          203 a          439 c          460 g          194 t
ORIGIN      
        1 ttggtgctgg agatgccggc cagggtgacc tcatcccgct tgggcacctt gagcctgaaa
       61 ggaagcgaag gcatcagtcg aatggccgat gtcggagcaa ggagcggata tcgccgcgcc
      121 ggcgcgggtg cgacgttggg atcgaggcgc gggcactggg gctcgcgccg aagccctcga
      181 gagagacgcc gtccatgcac gttaccattg atcccgccat cctgtacttt ggcacgccgg
      241 tggtgctggt cagcaccacc aatcccgatg gatcacccaa cctcgccccg atgtcgtccg
      301 cctggtggct gggccggagc gcggtgctgg gcttcggggc ccgatcgcac actcccgcca
      361 atctgctgcg cacccgcgag tgcgtgctca acctgccatc ggtcgaccag gtggcggcgg
      421 tcaaccgcct ggcccgcacc accgggtctt ccccggtgcc gccgcacaag gtggcgatgg
      481 gctaccgcca cgagaaggac aaattcggtg tggccggcct cacccgagtg gactcgacga
      541 tagtcacccc accccgggtg gcggaatgcc cggtgcagct cgaggcggtg ctggagggga
      601 gcttcggact ggcggagagc gaccccgacc ggcggggaaa actcgtggcc ctggaggtgc
      661 gcgtggtgcg ggtgcacgtg gacccacgga tccggatggc ggggtacgaa caccggatcg
      721 atccgcgccg gtggcggccg ctcatcatga acttctgcga gttcttcggg ctgggcgacg
      781 tgttgcatca ctcgaccctg gcggagattc cggaggacgc ctaccgcccc ccggtcacgg
      841 cgccagtgtc accggccgtc caggcggcag ccaacggagt tgctcgctga gccccgccgc
      901 ccgaaacgcg tgctccaggt ccgcgcggga ctcggtgaag tgctcccagc cttcgtagtg
      961 aaccggcacg atcggcgcgg gcgcgaagag gcgcgccagc tcgaccgtgc cgtcggcggt
     1021 gagggtgagc ggctggtcgc ctgccacctt caccttggcc gcgcccgcaa aggcgatcac
     1081 cgcgcgaacc ggccccagtg cgcggatcgt ctcgaggtcc tcgtaccaga cggagtcccc
     1141 ggtgaggtag agtccgtggc cggtatcatc cacccagcgg aggaggaagc cgatcaccgg
     1201 gccgcgatcg ccgccggcag gtccatgccg ggccggggtg gcgtagacac ggagcctctc
     1261 gccccggcca ttctcgaggg tcaccaggtc gtcgat
//
LOCUS       DATIFF010000801         1643 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1179667, whole genome shotgun sequence.
ACCESSION   DATIFF010000801 DATIFF010000000
VERSION     DATIFF010000801.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1643
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1179667"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..599
                     /locus_tag="VLD58_11630"
     CDS             <1..599
                     /locus_tag="VLD58_11630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HSB55004.1"
                     /translation="FVHRPQKCVVTQRQVGQHSRSFKTALRAALREDPDVILVGEMRD
                     LETVSIAIETAETGHLVFGTLHTTTAASTIDRIIDQFPVDRQSQVRVMLAESLKGVIA
                     QVLCRRVGGGRVAAKEILLSIPAVSNLIREGKTFQIPSIMQTNRKTGMVTLNDALLEL
                     VEQKLVEPREAYLRSVEKTPFAALLKARRFDTTFLGET"
     gene            739..1545
                     /locus_tag="VLD58_11635"
     CDS             739..1545
                     /locus_tag="VLD58_11635"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmJ/YjtD family RNA methyltransferase"
                     /protein_id="HSB55005.1"
                     /translation="MSSPPILVLVAPQDIVNIGSAVRIAKNFGLTRLRLVAPEIFDPW
                     RIEGIAHNTGDLIERITIHDTLEQALADCVWSVALTARERTAKRTVYRPGAAAAELVA
                     RAETGPVALVAGREDKGLSNDELDRCHALVTIPTNPEYRSLNLAQAVAIMCYETMLAR
                     GGERRPIKPPRKPAEPASSELLERLFDDWRRALWSIEFFKTRQADHVMRSWREIIFRA
                     DLDAREASLVWAMGIEVSRFLERKGIAPAGPPPAEGDPGAAGTVPPAEAG"
BASE COUNT          273 a          570 c          560 g          240 t
ORIGIN      
        1 aattcgtcca tcggccccag aagtgcgtgg tcacccagcg gcaggtgggc caacacagcc
       61 gatccttcaa gaccgcgctc cgggcggcgc tgcgggagga cccggatgtc atcctggtag
      121 gcgagatgcg cgatctcgag acggtctcga tcgcgatcga gaccgccgag accggccacc
      181 tcgtcttcgg gacgctgcat accaccacgg ccgcctcgac catcgaccgg atcatcgacc
      241 agttcccggt ggaccggcag tcgcaggtgc gggtgatgct ggcggaatcg ctgaagggag
      301 tcatcgccca ggtgctctgc cgccgggtgg gcggggggcg ggtggccgcc aaggagatcc
      361 tgctgtccat cccggccgtc tccaacctga tccgggaggg gaagaccttc cagatcccgt
      421 ccatcatgca gaccaaccgc aagaccggca tggtgacgct caacgacgca ctactcgagc
      481 tggtggagca gaaactggtg gagccacgcg aggcctacct gcgctcggtc gagaagacgc
      541 cgttcgccgc gctgctcaag gcccggcgct tcgacacgac gttcctcggc gagacctgac
      601 cgttccacgt cctccgttcg agttcccagt tccgagttcc cagttccgca tcccggcacc
      661 gggggaatct cagcgcggcg gagcaacgaa ctgggcactg ggaaccgaac tgaacgcgga
      721 acagagtagc tttgagccat gtcctcccca ccgatcctgg tgctcgtcgc cccgcaggac
      781 atcgtcaaca tcggcagcgc cgtccggatc gcgaagaact tcggactcac ccggctgcgc
      841 ctggtggccc ccgagatttt cgatccctgg cggatcgaag ggatcgcgca caacaccggt
      901 gacctgatcg agcggatcac gatccacgac accctcgagc aggccctcgc cgactgcgtc
      961 tggtcggtgg ccctcaccgc ccgcgagcgc accgcgaaac gcacggtgta tcggcccggc
     1021 gccgcggctg cagagctcgt ggcgcgggcg gagaccgggc cggtggcgtt ggtcgccggg
     1081 cgggaagaca aggggctgtc caacgacgag ctggatcgct gtcacgccct cgtcaccatc
     1141 ccgaccaatc cggagtatcg ctcgctcaac ctggcgcagg ccgtcgccat catgtgctac
     1201 gagaccatgc tggcgcgggg cggcgagcgg cgacccatca agccgccgcg caagccggcc
     1261 gagccggcgt cctcggaact gctggagcgg ctgttcgacg actggcggcg ggccctgtgg
     1321 agcatcgagt tcttcaagac ccgccaggcc gaccacgtga tgcgctcctg gcgggagatc
     1381 atcttccggg ccgacctcga cgcgcgggag gcctccctgg tgtgggccat ggggatcgag
     1441 gtgtcgcgtt tcctggagcg aaagggcatc gccccggccg ggccgccgcc cgcggagggc
     1501 gacccggggg cggcgggcac ggtgcctccc gccgaagcgg ggtgaggtgg ccgcggctcc
     1561 caaaccgggc cggcccgcgt tagcttacgg cctcacgaca gacctacccg gagtgcgacc
     1621 gtggggcgat ccgccgcgta ctg
//
LOCUS       DATIFF010000802         2523 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1025694, whole genome shotgun sequence.
ACCESSION   DATIFF010000802 DATIFF010000000
VERSION     DATIFF010000802.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2523
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1025694"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..682)
                     /locus_tag="VLD58_11640"
     CDS             complement(<1..682)
                     /locus_tag="VLD58_11640"
                     /inference="COORDINATES: protein motif:HMM:NF014803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55006.1"
                     /translation="MSDQERTIATTISPPTWTTRDSEKLYNMSGWGQGYFRVNEAGHV
                     TVHPDGNPKRGLDLYQLALDLNAQGVGLPLLLRFSDILRSRIQALAGQFESTIKEFGY
                     DGSYTTVYPVKVNQQRHVVQEIVEFGTPHGAGLECGSKPELMAVLGLNESTNHLIVCN
                     GYKDEEFMRLALMGQKLGHTVLIVLEQLNELEVLLRVADDMGIQPTVGVRIKLASEGS
                     GRWAKSAGE"
     gene            973..1656
                     /locus_tag="VLD58_11645"
     CDS             973..1656
                     /locus_tag="VLD58_11645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55007.1"
                     /translation="MQYLTLNSVRRLPPALKLRLQVAYARAWEALTDTHQTQAAMFVT
                     RLADRLPLEEALARYVREVAVPVAMRETVRARALLSVADAVPAVPGATDSADPWQRLR
                     PDRLVEAVRRRAQWVEETTLRCRMTACLADAAVTDTHTRMAVEVAELLAESIPADEAL
                     MAYIRSFDLPARDGDSVFRAALAELAARRLPGGERPILHVTPAKPPAREIPATVPMAP
                     PAFGLRVIV"
     gene            1744..>2523
                     /locus_tag="VLD58_11650"
     CDS             1744..>2523
                     /locus_tag="VLD58_11650"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HSB55008.1"
                     /translation="MRWSYSIGRIAGTEIKVHVTFLLLLAWLAFQAYAVGGAAAALDR
                     SIFVLALFACVTLHEFGHILVARRFGVHTPDVLLLPIGGVARLERIPDEPRQELAIAL
                     GGPAVTVAIAVLLYGYLRATGFAGPFLPTDPNAGPFAPRLMVVNVVLLVFNLIPAFPM
                     DGGRVLRSLLATKLGLVRATRVAAAVGQTLAVVMGLVGLSPYGSPLLVLIAFFVFIGA
                     AAEASAVETRAAAQGLKVAQVMVTQFRTIPVHATLADAVDLL"
BASE COUNT          328 a          880 c          866 g          449 t
ORIGIN      
        1 tctctccggc gctcttggcc caccggcccg acccctcgct cgccagcttg atccggacgc
       61 ccacggtagg ctggatgccc atgtcgtcgg cgacgcgcag cagaacctcg agctcgttga
      121 gctgctccag gacgatcagt accgtgtgcc cgagcttctg acccatgagg gcgaggcgca
      181 tgaactcctc gtccttgtag ccgttgcaga cgatcagatg gttggtgctc tcgttcaggc
      241 cgagcaccgc catgagctcg ggcttgctgc cgcactcgag gccggctccg tggggcgtgc
      301 cgaactcgac gatctcctgc acgacatggc gctgctggtt caccttgacc gggtagaccg
      361 tggtgtagct cccgtcgtac ccgaattcct tgatggtgct ctcgaactgc ccggccaggg
      421 cctggatcct cgagcgcagg atatcggaga accggagcag gagcgggagg ccaacgccct
      481 gggcgttgag atcgagggcg agttgataga gatcgagccc gcgcttgggg ttgccgtcgg
      541 ggtggacggt gacgtgcccc gcctcgttga cccggaagta gccctgaccc cagccgctca
      601 tgttgtagag cttctcggag tcccgggtgg tccaggtcgg cggggagatg gtcgtggcga
      661 tggtgcgctc ctggtcgctc aaagcgtgaa aaaataacga gttaactgtg ttggcgccag
      721 cttggcggac cgccggatcg ttgcggtggc accacaaaca gccggaacgg ggcggcagcc
      781 gcgcgaggcg cgaggaggcc aggcccaact tcggggccgg tccggactcg ttgccggctc
      841 agcggttggc gccgttcggg cggtccaggc ccaaggcggc acgaagctcg cactttcccg
      901 ggttgtgcag ctgtaagcct tggcattgca gacagttgca cggctgtctc aagcttcgcc
      961 gtcgaggtca ccatgcaata cctgactctg aattccgttc gccgcctccc cccagcgctg
     1021 aagctgcggc tccaggtcgc ctatgcgcgc gcctgggagg ccctgactga tacgcaccag
     1081 acccaggccg ccatgttcgt cacccggctc gccgaccgcc tgccgctgga agaggcgctc
     1141 gcgcgctacg tccgggaagt cgcggttccg gtcgccatgc gggagacggt acgggctcgc
     1201 gcccttctgt ccgtcgccga cgcggtcccc gccgtgcccg gcgccaccga ttccgccgat
     1261 ccgtggcagc ggctccggcc cgaccggctg gtggaggccg tgcgccgccg ggcgcagtgg
     1321 gtcgaggaaa cgacgctgcg gtgccggatg accgcctgtc tggccgacgc cgccgtgacc
     1381 gacacccata cccgcatggc cgtggaggtc gccgagctgc tcgcggaatc gatccccgcg
     1441 gacgaggcgc tcatggcgta catccgcagc ttcgacctcc ctgcgcggga cggcgattcc
     1501 gtcttccgcg cggcgctggc cgagctggcc gcgcgccggc tgcccggcgg cgaacgcccc
     1561 atcctgcacg tgacgccggc gaagccgccg gctcgcgaga ttccggcgac cgtcccgatg
     1621 gcgcctcccg cgttcgggct ccgcgtgatc gtgtagcgcc gttcctcctg cggcgttccg
     1681 ggtgccgggc tccggtgtat cttcaccggg aaccggcact tcttttttcg cgggcggcgc
     1741 gtgatgcggt ggtcgtattc gatcggacga atcgccggga ccgagatcaa ggtccacgtc
     1801 accttccttc tcctcctcgc ctggttggcg ttccaggcct acgcggtcgg cggggctgcg
     1861 gccgcgctcg accgcagcat cttcgtcctc gcactcttcg cctgcgtcac gctgcacgag
     1921 ttcgggcaca ttctggtggc ccgccgcttc ggggtccaca ctccggacgt cctgctccta
     1981 ccgatcggcg gcgtcgcccg gctcgagcga attccggacg agccgcggca ggagctggcg
     2041 atcgccctcg gtgggccggc cgtgaccgtg gcgatcgcgg ttctcctgta cgggtatctg
     2101 cgcgccaccg gcttcgccgg cccgttcctg cccaccgacc cgaacgccgg gccgttcgcc
     2161 ccgcggctca tggtggtaaa cgtggtgctg ctggtgttca acctcattcc ggcgttcccc
     2221 atggacgggg gccgggtgct gcggtcgctc ctggccacca agctcggact ggtacgggcc
     2281 acgcgcgtcg ccgcggccgt gggccagacg ctggcggtgg tgatggggct ggtgggactc
     2341 tcgccctacg ggtcaccgct cctggtgctg atcgccttct tcgtcttcat cggcgccgcc
     2401 gcggaagcct cggccgtgga gacccgggcg gccgcccagg gactcaaggt ggcgcaggtg
     2461 atggtgaccc agttccgtac gatcccggtg cacgctacgc tggccgacgc cgtggacctc
     2521 ctg
//
LOCUS       DATIFF010000803         1386 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1639259, whole genome shotgun sequence.
ACCESSION   DATIFF010000803 DATIFF010000000
VERSION     DATIFF010000803.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1386
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1639259"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..76)
                     /locus_tag="VLD58_11655"
     tRNA            complement(3..76)
                     /locus_tag="VLD58_11655"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(40..42),aa:Met,seq:cat)
     gene            complement(118..405)
                     /locus_tag="VLD58_11660"
     CDS             complement(118..405)
                     /locus_tag="VLD58_11660"
                     /inference="COORDINATES: protein motif:HMM:NF016839.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HSB55009.1"
                     /translation="MTPARWAAVAALAFALYFAVQGGEYGTTHLLQLQREEAEERALV
                     AQLQQIVDSLQSAARAIQQDPRVQERVARESFGMIRKGEFLYRIVPGDSAP"
     gene            complement(402..>1386)
                     /gene="eno"
                     /locus_tag="VLD58_11665"
     CDS             complement(402..>1386)
                     /gene="eno"
                     /locus_tag="VLD58_11665"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000103948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HSB55010.1"
                     /translation="TPNKSHLGANAILAVSLAVARAAAQDCGLPLYRYLGGPMARILP
                     VPMMNILNGGAHSSNNVDAQEFMVVPIGADNFPDALRMGVEVFHSLKKVLTGMGLSTA
                     VGDEGGFAPMLPSNEAALDVVMQAIAAAGYEPGRDVAIALDVAASELFQDGEYVFKKG
                     DGSRRSAEAMVDLYAGWVDRYPIVSIEDGLAENDWPGWALLTERLHDRVQLVGDDLFV
                     TNVDRLGRGIEEGVGNAVLVKVNQIGTLTETLQCIELAKGSAYGVVISHRSGETEDTF
                     IADLAVATGAGQIKTGSASRTDRTAKYNQLLRIAEELGDLAHYPGRDLYPL"
BASE COUNT          207 a          508 c          449 g          222 t
ORIGIN      
        1 agtagcaggg gcgggactcg aacccgcgac cccggcatta tgagtgccgt gctctaacca
       61 gctgagctac cctgccagag gggcgaaaac ctagccctcc gccttgccaa actcaagtta
      121 cggcgcgctg tcacccggca cgatgcggta gagaaactcg cccttccgga tcatcccgaa
      181 ggactcgcgc gccacccgct cctgtacccg gggatcctgc tggatggccc gcgcggcgct
      241 ctggagcgag tccacgatct gctggagctg cgccaccagc gcccgttcct ccgcttcctc
      301 ccgctggagc tggaggagat gcgtggtccc gtattcgccg ccctgcacgg cgaagtagag
      361 tgcgaacgcg agggccgcta ccgccgccca gcgcgccggg gtcacagcgg gtagaggtcc
      421 cgcccgggat agtgcgccag gtcgcccagc tcctccgcga tccgcagcag ctggttgtac
      481 ttcgccgtgc ggtcggtccg gctggcgctg ccggtcttga tctggcctgc gccggtggcc
      541 acggccaggt cggcgatgaa ggtgtcctcg gtctcacccg agcgatgcga gatgaccacg
      601 ccgtacgcgc tccccttggc cagctcgatg cactggaggg tctcggtcag ggtgccgatc
      661 tggttcacct tcaccagcac cgcgttcccc acaccctctt cgattccccg gcccagccgg
      721 tcgacgttgg tgacgaagag gtcatccccc accagctgca cccggtcgtg cagccgctcg
      781 gtgagcagcg cccagccggg ccagtcgttc tccgccaacc cgtcttcgat cgacacgatc
      841 ggatagcggt ccacccaccc ggcgtacagg tccaccatcg cctcggcgct gcgccggctg
      901 ccgtcgccct tcttgaacac gtactccccg tcttggaaca gctccgaggc cgccacgtcg
      961 agcgcgatgg ccacgtcccg gcccggctcg tagcccgccg cggcgatcgc ctgcatcacc
     1021 acgtcgagcg cggcctcgtt ggagggcagc atcggcgcga agccgccctc gtcgcccacg
     1081 gcggtcgaga ggcccatgcc ggtgagcacc ttcttgagcg aatggaacac ctcgacgccc
     1141 atgcgcagcg cgtcggggaa gttgtcggcg ccgatgggca ccaccatgaa ctcctgcgcg
     1201 tccacgttgt tcgacgagtg cgcgccgccg ttcaggatgt tcatcatcgg caccgggagg
     1261 atccgggcca tcggaccgcc gaggtagcgg tacagcggca ggccgcagtc ctgcgccgcc
     1321 gcccgcgcca cggcgagcga gacggcgagg atggcattcg cgccgaggtg gctcttgttg
     1381 ggcgtg
//
LOCUS       DATIFF010000804         3344 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2255361, whole genome shotgun sequence.
ACCESSION   DATIFF010000804 DATIFF010000000
VERSION     DATIFF010000804.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3344
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2255361"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2329)
                     /locus_tag="VLD58_11670"
     CDS             complement(<1..2329)
                     /locus_tag="VLD58_11670"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB55011.1"
                     /translation="MSVPSDPFKAALADRYAIERELGRGGMATVFLAKDLRHQRQVAL
                     KLLEPRLAAEIGTERFEREIRLAARLQHPHICSVYDSGAAGDQLWFAMPFIEGESLDT
                     RLEREGTLPVDEALRIAREAALALAYAHDHGVVHRDIKPANLLLTRDGSVLVADFGIA
                     RAVATTTGAGEPTLTQSGFSPGTPAYMSPEQKAGVANVDGRSDVYSLGLVLFEMLTGT
                     RPFGGGMLEAFAQALSDPVPRVKQVRADVPAGVDVVLQRALATHPDQRYPTIAEMGND
                     LDTIARGKPLASPGGNRRRGSRRILAIGAVALLLAVLGYGLFRGRAGSDTTLLRSTAV
                     LPFADLSPDHADAYFSEGLAEELTTALAKIPGLRVAARSSAFQFRDSPIDVREVSRRL
                     HVGTVLEGSVRRNGSRIKVSAQLVNANDGYELWSEIYDRDQADVFQVQEEIARAIGAA
                     LRVRLASSVDSALRHRPTGSLQAYDLYLKGRFAINQRTDATLPEAARLFEGALALDSG
                     MARAWSGLADAKLLLPLYSGVDPKVAWPQAKAAALRAIALDSTSAEAYTSLAYGTMLN
                     EWDWAGAERAFQKAIAVDSTYPTAHHWYADFLAGRGRLDEALVQIDRARQLDPLSRII
                     PTEHGWMLLAQGRTREADSVLSEVLRIDPGFSQGLFVLAQVRIVEKRYDDAIRMVRQS
                     LATGGSSSHGSGVLIAALALSGDRPGAQAVLDSVTQQSKREYVPPFALAMAYANLGDL
                     DRAYAMLERGIAERDVLLPENFFEPLLDPIRRDPRY"
     gene            complement(2326..3075)
                     /locus_tag="VLD58_11675"
     CDS             complement(2326..3075)
                     /locus_tag="VLD58_11675"
                     /inference="COORDINATES: protein motif:HMM:NF018963.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase-like
                     domain-containing protein"
                     /protein_id="HSB55012.1"
                     /translation="MGPAVVRVGELASGTPYVPGTLDAYLHDAGGAPASEPLTLSLTR
                     FDCVTLVESCLGVARSSLAGEAPSWERFGAAIERMRYRDGRRDGYASRLHYFSEWIAD
                     GERRGLVHDLGAELGGIDDNRPLRFMTEHRQSYPALTDDKVYAAIGAMERSLDGMPRR
                     MIPTDQVRAVADRIETGDILAFATSIPGLDVTHAAMAYRDREGVMRVLHAPLSGGVVE
                     VTRTTLPEYVAAIRRATGILVARPAWGVQPS"
BASE COUNT          517 a         1158 c         1169 g          500 t
ORIGIN      
        1 gatagcgcgg gtcgcgccgg atcgggtcga gcagcggctc gaagaagttc tccggcagca
       61 gcacatcccg ctcggcgatg ccgcgctcca gcatggcgta ggcccggtcg aggtcgccca
      121 gattggcgta ggccatcgcc agggcaaacg gcgggacata ctcccgcttg ctctgctggg
      181 tgacggagtc cagcaccgcc tgtgcccccg ggcggtctcc cgacagcgcc agggccgcga
      241 tcaggacgcc gctgccgtgg ctgctcgagc cgccggtggc cagcgactgg cggaccatcc
      301 ggatcgcgtc atcgtagcgc ttctccacga ttctcacctg cgccaggacg aacagccctt
      361 gtgagaaccc cgggtcgatc cggagtacct cgctcaggac cgagtccgcc tctctggtcc
      421 ggccctgtgc caggagcatc cagccgtgct ccgtcgggat gattcgtgac agcggatcga
      481 gctgacgggc tcggtcgatc tggaccaggg cctcgtcgag ccggccccgc ccggccagga
      541 aatcggcgta ccagtggtgc gccgtgggat aggtcgagtc gaccgcgatc gccttctgga
      601 aggcccgctc cgcgccggcc cagtcccatt cgttgagcat cgtcccgtat gccagcgagg
      661 tgtaggcctc ggcactggtg ctgtcgagcg cgatggcccg cagcgccgcc gccttggcct
      721 ggggccaggc aaccttcggg tcaacgcctg agtagagtgg cagcaacagc ttggcatcgg
      781 ccagcccgga ccaggctcgt gccatccccg agtccagcgc cagcgccccc tcgaacagcc
      841 gggccgcctc gggaagagtg gcatcggtgc gctgattgat ggcgaaacga cccttgagat
      901 agagatcgta ggcctggagg cttccggtgg gacggtgtcg cagcgccgaa tcgaccgagg
      961 aggcgagccg tacccgcagc gcggcgccga tggcacgggc gatctcttcc tgcacctgaa
     1021 agacgtcggc ctggtcccgg tcgtagatct ccgaccagag ctcgtaaccg tcgttcgcgt
     1081 tgaccagctg agcgctcacc ttgatgcggc tgccgttccg gcggaccgag ccctccagca
     1141 ccgtccccac atgcagccgc cggctcacct cgcgcacgtc gattggggag tcgcggaact
     1201 ggaatgcgga ggaacgcgcc gcgacccgaa gcccggggat cttcgccagc gccgtcgtca
     1261 gctcctcggc caggccctcg ctgaagtagg catcggcatg atcggggctg agatcggcaa
     1321 acggaagcac ggcggtggag cggagcaggg tcgtatccga accggcccgc ccgcggaaga
     1381 gcccatagcc caggacggcg agcagcaacg ccacggcccc gattgccagg atgcggcgcg
     1441 agccccgccg acggttcccg cctggactcg cgaggggctt tcctcgggcg atcgtatcga
     1501 ggtcattgcc catctcggcg atggtcgggt agcgctggtc cgggtgggtg gcgagcgccc
     1561 gttgcagcac cacgtccacg ccggccggca catccgcccg gacctgcttc acgcgcggga
     1621 ccgggtcact caacgcctgc gcgaaggcct ccagcatccc tccgccgaac gggcgcgttc
     1681 ccgtcagcat ctcgaacagc accagtccca ggctgtacac gtcactccgc ccgtcgacgt
     1741 tggcgacacc cgccttctgc tcggggctca tgtacgccgg cgtgccggga gagaatccgc
     1801 tctgggtgag ggtgggctcc ccggcgcccg tggtggtagc caccgcgcgc gcgatgccga
     1861 agtcggccac cagcacgctg ccgtcgcggg tgagcagcag gttggccggc ttgatgtcgc
     1921 ggtgcaccac gccatggtcg tgggcgtagg ccagcgccag cgcggcttca cgggcgatgc
     1981 ggagcgcctc gtccaccggg agggtgccct cgcgctcgag ccgggtgtcg agcgactctc
     2041 cctcgatgaa cggcatggcg aaccagagct gatcgcccgc cgcgcccgag tcgtagaccg
     2101 agcagatgtg agggtgctgg agccgggccg cgagacggat ctcccgctcg aatcgctcgg
     2161 tcccgatctc ggcggcgagc cggggctcga gcagcttgag cgcgacctgc cgctggtgcc
     2221 ggaggtcctt cgccaggaag accgtggcca tcccgccccg gcccagctcc cgctctatgg
     2281 catagcggtc ggccagtgcg gccttgaatg gatcggaggg gacgctcacg agggctggac
     2341 gccccaggcc ggccgcgcca ccaggatgcc ggtcgcacgg cggatggcgg ccacatactc
     2401 gggcagggta gtgcgggtga cttcgaccac tccgcccgag agcggggcat ggagcacccg
     2461 catcacgccc tcgcggtcgc gataggccat cgccgcatgc gtgacgtcga gtcccgggat
     2521 cgaagtggca aatgccagga tgtcgccggt ctcgatccgg tctgccaccg cccgcacctg
     2581 gtcggtggga atcatccgcc tcggcatgcc gtcaaggctc cgttccatgg cgccgatcgc
     2641 ggcgtagacc ttgtcatcgg tcagcgcggg gtagctctgc cggtgctcgg tcatgaaccg
     2701 gagcggccgg ttgtcgtcga tgccgccgag ttcggcgccg aggtcatgca ccaggccgcg
     2761 ccgctcgccg tcagcgatcc actcgctgaa gtagtgcagg cgggaggcgt agccatcccg
     2821 ccggccgtca cggtagcgca tccgctcgat cgcggcgccg aaccgttccc acgaaggcgc
     2881 ttctcccgcg agcgagctgc gcgccacccc aaggcatgat tccaccaggg taacgcagtc
     2941 gaagcgggtg agggagaggg tgagcggctc gctcgccgga gcgccgccgg catcatggag
     3001 gtaggcgtcg agtgtgcccg gcacgtaagg cgtgccgctg gcgagttctc ctacccgcac
     3061 gaccgccggt cccatggggc gatgggccag cgccagcgac tcaccccgca gggtggcgct
     3121 ccaggacgca agccgctccc gatcgggatc gggggtcctg gtggcgctgg gttctggacg
     3181 acagaagccg agcgccgcca gcgagagcgc ggcggcctcg acgaattccc tgcgggagac
     3241 ctgccccgga ccagtcagct cggcgatccc ttttcggagg gtggggagac cagcaactgc
     3301 ctcaggaagt tagtatcgac cggcttcacc atgtgatggt cgaa
//
LOCUS       DATIFF010000805         9207 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1179868, whole genome shotgun sequence.
ACCESSION   DATIFF010000805 DATIFF010000000
VERSION     DATIFF010000805.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9207
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1179868"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..545)
                     /locus_tag="VLD58_11680"
     CDS             complement(<1..545)
                     /locus_tag="VLD58_11680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55013.1"
                     /translation="MTAAALPSRDGTPLDRFLRLFSDVRAGEGATAVILTANVFLLLS
                     SYYVIKPVREALILSSGGAEVKSYASAGQAILLLGMVPLYGLLADHLPRRRLLNVVTA
                     FFVACLIGFWALARANAPVGVPFFLWVGIFNLMVIAQFWSFANDLYTKDQGERLFPIV
                     AFGASLGAVVGSLLTSRLIPLL"
     gene            complement(542..1939)
                     /locus_tag="VLD58_11685"
     CDS             complement(542..1939)
                     /locus_tag="VLD58_11685"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSB55014.1"
                     /translation="MRTTLPVLTLLSLAAAPVVAQTATGSATLKELSTAFESVAARVA
                     PTVVQIRVTAYTPDEDSPNTASLLSPQRSTGSGVILSADGYIVTNAHVVRGGRRFLVA
                     VPRPAAAGVPGRSNLRPVSQEVPALLIGTDRETDLAVLKVDLTDLAAATLGDSDSLLP
                     GHLVMAFGSPLGLASTVTMGVVSATNRQLRDEDRMVYIQTDAPINPGNSGGPLVDASG
                     RVMGINTLILSQSGGSEGIGFAAPSNIVRAVYEQIRKWRRVRRGEIGVFAQTITPTLA
                     TRLQLARDWGVILGDVYPGSPAERAGLKVGDLVYSLDGKPMENGRQFDVDLYRKPIGQ
                     PVTLEVGRGPQRVILKVPVVERRGDPLQFSDVVTAEKNLVPRLGFLGLDLNAQVAQLI
                     PGLRADRGVVVAAVAGDASSGLRPGDVIYALDRTAIGTLAELRAGVDNLPPGATVVLQ
                     VGREGQLRFLTVILE"
     gene            complement(1936..3627)
                     /locus_tag="VLD58_11690"
     CDS             complement(1936..3627)
                     /locus_tag="VLD58_11690"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB55015.1"
                     /translation="MTPPNLIRRRSTSAPSALGGLSSGSGVSLPSEVLAQTCRRIHSV
                     GMAFAILWSVPLLLFLLVAPHVDSMPMLAAQLWPMPGAVIAGTGLVCSLLLMVVSPRF
                     SAKPELQLFLGSAFLVVTSFLFGLLEFWVPEFNRPQATFIGIAILAYSSIVPNEPGRT
                     LAVGLLAATMAPLGYLVTLMRGVQVEATWFHYLIAFLPNYMCALLAVIPAKIIRQLGH
                     QVKKARELGSYRLEELLGKGGMGEVYKASHQLLARHAAVKLIKADSLANDPDRARVMI
                     ERFRREAEASASLRSPHTISLYDFGVSSDGTFFFVMELLDGLDLESLVQRFGPLDPAR
                     VVYLLRQACESLEEAHRRGLIHRDIKPSNIFTCRMGLAVDFVKVLDFGLVKTEREHTD
                     VRLTAPNTTTGTPAYMAPEVVLGTLPADHRIDIYALGCVAYWLLTGQLVFEGGTSMQQ
                     LLRHAHDQPVPPSHRSELPIPKALDDVILAALAKNPDQRPQSAAQFGGMLLDAIPEAE
                     RWNDERAEQWWMRHHPESARPEPTCCDGLTLSKLGEGWVPTSAEPGTAALAEVTR"
     gene            complement(3704..5176)
                     /locus_tag="VLD58_11695"
     CDS             complement(3704..5176)
                     /locus_tag="VLD58_11695"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HSB55016.1"
                     /translation="MSMRFTSILLAVSLTGCAIGPSTRVTPTAPRPLAVSDSLVTPAS
                     RSFLDSLARARDSVRSDTAPPTLWKPAPLALDSTSDLPWLEVLKDPALVALVRTAVAN
                     NRELRAAVARVREYRASLGASRGDLFPQITANGSYSTNQSIFGAFPPQKFDAVRITAD
                     LSWELDFWGRLRRQAEAARFDWQGREEDRRAAVLSLVSSVALTYLQLRELDQSTVLAE
                     RTLASRQATLDLSRRRFNQGVISELDVRQFEADAAAPAVTLASVARQRAEAEHQLSLL
                     VGQEPGPIERGNSLEQAVQAIKVPDSLPGDLLLRRPDVLSAQRDWQGSTARIGVAVGN
                     RLPKFVVSGTYGTQRPDFDKLFTQNAEVYQLAGGISIPLFTGGRLINQERAARARAEQ
                     ARNRYEQAVLSAAREASDALTGLRLSRDQLAAQETQTQALRRAYALAEKRYESGVSSY
                     LEVLDAQRGLFSAELALVQVERQYLSATVQLYRALGGGWD"
     gene            complement(5173..8373)
                     /locus_tag="VLD58_11700"
     CDS             complement(5173..8373)
                     /locus_tag="VLD58_11700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0042908 - xenobiotic transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HSB55017.1"
                     /translation="MSAASTSDSTEIRYFFIRRPVLAAVLSIVVTLLGLFALLRLPVN
                     RYPLITPPAVSVSAVYPGATAEDVAQAVAAPIEQQLSGLDGLLYFKSSNSSDGALNLQ
                     VYFDINRDQDLAAVDVQNAVKLAEPQLPEAVRTNGIVVTKAQSDILFAMALYSNDSRY
                     DASYLTNYAKLYLEDEIKRIPGVGNARVFGQLEFSMLLSLDPDRLAQLGLTVGDVATA
                     VREQNTTNPAGRLGREPSPAGTQVTLPVTTEGRLSDPEQFANIILRARPDGSLVKVKD
                     VGKVTLGARNYDQVARVDGKPTTFLLVYLRTGSNALDVRKLFEQRMNELSRTFPAGVS
                     WVLPYDTTPFITESIREVVKTLAEAMLLVTLVVFVFLQSWRATLIPVLAVPVSVIGTF
                     LGLLMLGFSVNVLTLFGLVLAIGIVVDDAIVVIENVERIMSDEKVSARIAADRAMRQV
                     GGALVAIVLVLCAVFIPVAFLGGITGEMYKQFAVTIVLSVVISGMVALTLTPALCAVL
                     LEHAATPDQSTNRFFCWFNDRFGKLTTRYASGVSRILGRPKATFAAFAVILALTFVLF
                     RRTPQAFIPSEDKGFFAVAIQLPDGASKQRTEAVVSEVEKFLLADKGVRHVGALVGVD
                     ALSFSAQTNSGIIFVNLKPWEERTSADLSLDAIVGRTNMHLFGLKQTLAFAFNFPEIP
                     GLGTTSGLEMNLQARGGQTFPQFAASVQNFIGDAQKLPELAGVQTTFRADVPQLFLKV
                     DREAAKARGVALTDLFQTLQALLSTLYINDFNLYGKTYRVQAEAQAPFRQRPEDISRL
                     YVRSSKGDMVPIGALTSTEFRGGPSIQSRFNGFTSALITGVPAPGRSSGEVLNAVEKL
                     VADKYEAQGIGYGYSGQSFQERASSGQSGLVFTLGLVLVFLVLAAQYESWAIPFAVIL
                     GIPFGICGAFVGVFARGMASDVYFQVGLITVVGLAAKNAILIVEFATSLRDQGMSIVE
                     AATEAARERFRPILMTSFAFILGVLPLAIANGAGAASRRSLGTGVLFGMLTATTVGIF
                     FIPLFFATIRGLADRGLFRRRQHAVATPAVASPDAE"
     gene            complement(8370..>9207)
                     /locus_tag="VLD58_11705"
     CDS             complement(8370..>9207)
                     /locus_tag="VLD58_11705"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSB55018.1"
                     /translation="NAEANLARLKPLLADNAISRQDYDNAEAEAKQARAGVEDARAAV
                     DQARKDFEDTEVKAEIAGRVGRANLELGTRVRGSDDILTTIDVLSPVYVTFSPTGQQL
                     LDWRRDPRASRLLTPGGGAKVQAVLSDGSVLPVTGRIDFVDPVLNPATGAQQFRAAFT
                     NADRFLLPGQFVRIRVLGLQRDKAILVPQRAVIQQLGRQMVFVVGPGDTVQARDVEAT
                     GWNGDQWLIARGLTSGDRVVVDGIQKIGPGRPVHPVPLADSVNTATAMPSAPGTGTGG
                     RQ"
BASE COUNT         1518 a         3080 c         3278 g         1331 t
ORIGIN      
        1 agcagcggaa tcaggcgcga ggtcaggaga ctccccacca cggcgccgag cgacgctccg
       61 aaggccacga tcgggaagag ccgctcgccc tggtccttgg tgtagaggtc gttggcgaag
      121 gaccagaact gggcgatcac catcaggttg aagatgccga cccagagaaa gaacggcaca
      181 cccacggggg cgttggcccg cgcaagcgcc cagaagccga tcaggcaggc cacgaagaac
      241 gcggtgacca cgttgagcag gcggcggcgg gggagatgat ccgccagcag gccgtacagc
      301 ggcaccatcc ccagcagcag aattgcctgc ccggcggagg cgtaggattt gacctcggcg
      361 cccccgctgc tcaggatcag cgcctcacgc accggcttga tgacgtagta ggagctgagc
      421 aggagaaaga cgttggcggt gaggatcacc gcggtggctc cctcgcccgc ccgcacgtca
      481 ctgaagagcc ggaggaagcg gtcgagcggg gttccgtctc gcgacggcag cgcggcagcg
      541 gtcattccag gatcacggtg agaaaacgaa gctgcccttc gcggcccacc tggagcacca
      601 cggtcgcgcc cggcggcagg ttgtcgaccc ccgcgcggag ctccgccagc gtgccgatcg
      661 cggtgcggtc aagcgcgtag atcacatcac ccgggcgcag gccggacgag gcatcgccgg
      721 ccaccgccgc gaccaccacg ccccggtcgg cccggagccc cgggatgagc tgggccacct
      781 gggcgttgag atcgagcccg aggaagccga gccgaggcac caggttcttc tcggcggtga
      841 cgacatcgct gaactggagc ggatcgcccc ggcgctcgac caccggcacc ttgaggatga
      901 cgcgctgcgg accgcgtccc acctcgaggg tcaccggctg gccgatcggc ttgcggtaga
      961 ggtccacgtc gaactgccgg ccgttctcca tcggctttcc gtcgagcgag tagaccaggt
     1021 cgcccacctt gagcccggcc cgctcggcgg ggctccccgg atagacgtcg cccaggatca
     1081 cgccccagtc gcgcgccagc tggagccggg tcgcgagggt aggggtgatg gtctgggcga
     1141 agacaccgat ctcaccccta cgaacccgcc gccatttccg gatctgctcg tacaccgctc
     1201 gtacgatgtt gctgggcgcc gcaaacccga tcccctcgct cccgcccgac tgactcagga
     1261 tcagggtgtt gatccccatg acccggcccg acgcatccac cagcggtccg ccgctgttcc
     1321 cgggattgat cggggcgtcg gtctggatgt agaccatccg gtcttcgtcc cggagctggc
     1381 ggttggtggc cgacaccacg cccatcgtca cggtactggc gaggccgagg ggcgagccga
     1441 aggccatcac caggtgcccg ggaaggagcg agtcggagtc gccgagggtg gcggccgcga
     1501 gatcggtgag atcgaccttg agtaccgcga gatcggtctc gcggtcggtc ccgatgagga
     1561 gcgcgggcac ctcttgcgag accggccgga gattggagcg cccgggcacg ccggcggccg
     1621 cgggccgcgg caccgccacc aggaagcggc gcccgccccg caccacatgc gcattggtga
     1681 cgatgtagcc gtcggccgag aggatgacgc cggatccggt gctgcgctgg ggcgagagga
     1741 gcgaggcggt gttggggctg tcttcgtcag gggtgtaggc agtcacccgg atctgtacca
     1801 ccgtcggcgc cacccgggcg gccacgctct cgaacgcggt gctcagctcc ttgagcgtgg
     1861 ccgagccggt ggccgtctgg gcgacgaccg gcgccgctgc cagcgagagc agcgtgagta
     1921 ccggaagcgt cgtcctcacc gggtgacttc ggccagcgcg gcggtgccgg gctcggcgga
     1981 agtggggacc cagccttcgc ccagtttgga cagcgtgagg ccgtcgcagc aggtcggctc
     2041 cggccgggca gactcgggat gatgccgcat ccaccactgc tccgcccgct cgtcgttcca
     2101 gcgctccgct tcgggaattg cgtcgagcag catcccgccg aactgggcgg cggactgcgg
     2161 ccgctgatcg ggattcttgg ccagcgccgc gaggatgacg tcgtcgagtg ccttggggat
     2221 cggcagctcg ctccggtgcg agggcggcac cggctgatcg tgggcgtgcc ggagcagctg
     2281 ctgcatcgac gtcccgcctt cgaataccag ctggccggtc aggagccagt aggcgacgca
     2341 gccgagggcg tagatgtcta tccggtggtc ggcgggcagg gtgccgagca caacttccgg
     2401 cgccatgtag gccggggtgc cggtggtagt gttgggggcg gtgagccgga cgtcggtgtg
     2461 ctcccgctcg gtcttcacca gcccgaagtc gagcaccttc acgaagtcga ccgcgagacc
     2521 catgcggcag gtgaagatgt tcgagggctt gatgtcgcga tgaatcagcc cccggcgatg
     2581 ggcttcctcc agcgactcgc aggcctggcg cagcaggtac accacccgcg ccggatcgag
     2641 cgggccgaag cgctgaacca ggctctcgag atcgaggccg tcgagcagct ccatcacgaa
     2701 gaagaaggtg ccgtcgctgg agacgccgaa gtcgtagagg ctgatcgtgt ggggcgagcg
     2761 gagcgaggcc gaggcctccg cttcacgccg gaaccgctcg atcatgaccc gggcgcgatc
     2821 ggggtcgttc gcgagggagt cggccttgat gagcttcacc gccgcgtgcc gcgccagcag
     2881 ctggtgcgag gccttgtaga cctctcccat cccgcccttc cccagcaact cttccagccg
     2941 gtagctcccc agctcgcggg ccttcttcac ctggtggccc agctggcgga tgatcttggc
     3001 cgggatcacc gcgagcaggg cgcacatgta gttgggcagg aacgcgatca ggtagtggaa
     3061 ccaggtcgcc tcgacctgga ccccgcgcat cagggtcacg agataaccca gcggcgccat
     3121 cgtcgccgcc aacaggccca cggccagggt tcttccgggc tcgttgggga cgatcgagct
     3181 gtacgccagg atcgcgatgc cgatgaacgt ggcctggggc cggttgaatt ccggcaccca
     3241 gaactcgagc aggccgaaga ggaacgaggt gacgacgaga aaggcagagc cgaggaacag
     3301 ctgcagctcg ggcttggcgc tgaagcgggg cgacaccacc atcagcagca gggaacacac
     3361 aagcccggtc ccggcaatca cggcgcccgg catgggccag agctgggcgg ccagcatcgg
     3421 catgctatcc acatggggcg caaccagcag gaacagcagc agtggcaccg accagaggat
     3481 cgcgaaggcc atccccaccg agtggatccg tcggcaggtc tgggccagca cctcgctggg
     3541 gagactgacc cccgagccac tgctgaggcc ccccagtgcg gagggggccg aggtgctgcg
     3601 gcggcgaatc agattgggcg gcgtcattcc ggcttacctg aaggttcctt cctttagact
     3661 acggaagtgc gggagcggcg gctaggcccc cgctcgcgtc agctcagtcc cagccgcccc
     3721 ccagggcccg gtagagctgc accgtggcgc tgaggtactg ccgctccacc tgcaccaggg
     3781 cgagctcggc ggaaaagagt ccccgctgcg cgtccagcac ctcgagatag ctcgacaccc
     3841 cgctctcata gcgtttttcc gcgagggcgt aggcgcggcg cagcgcctgc gtctgggtct
     3901 cctgggccgc cagctgatcg cgcgagagcc ggagcccggt cagcgcgtca ctggcttccc
     3961 gcgccgccga caggaccgcc tgctcgtaac ggttccgcgc ttgctccgcc cgcgcccggg
     4021 cggcgcgttc ctggttgatc agccggccgc cggtgaacag cggaatcgaa atcccgccgg
     4081 cgagctgata gacctcggcg ttctgggtga agagcttgtc gaagtcgggg cgctgggtgc
     4141 cgtacgttcc gctaacgacg aatttcggga gccggttccc caccgcgacc ccgatccggg
     4201 cggtggaacc ctgccagtcg cgctgggcgc tcagcacgtc ggggcggcgg agcagcagat
     4261 cgccggggag ggagtcgggc accttgatgg cctgcaccgc ctgctccagg gaattgccgc
     4321 gctcgatcgg gccgggctcc tgtcccacca ggaggctcag ctggtgctcc gcctcggccc
     4381 gctgccgcgc gacgctggcg agcgtcacgg ccggtgccgc ggcatcggcc tcgaactggc
     4441 gcacatcgag ctcggagatc acgccctggt tgaagcggcg gcgggagagg tccagcgtcg
     4501 cctgccggga agcgagggtc cgctcggcca gcaccgtgct ctggtccagc tcacgcagct
     4561 ggagataggt gagcgcgacg ctgctcacca ggctcagcac cgcggcccgc cggtcttctt
     4621 cccgtccctg ccagtcgaag cgcgccgcct cggcctggcg ccggagccgg ccccagaagt
     4681 cgagctccca cgagaggtcg gcggtgatcc gcaccgcatc gaacttctgg ggcgggaagg
     4741 cgccgaagat cgactggttg gtgctgtagg atccgttggc cgtgatctgg gggaagagat
     4801 caccgcgcga ggcgccgagg gaggcgcggt actcccgcac ccgggccacc gcggcgcgga
     4861 gctcacgatt gttggccacc gcggtccgca ccagggccac cagcgccggg tccttgagca
     4921 cctcgagcca gggcagatcc gaggtgctgt cgagggcgag cggcgccggt ttccagagcg
     4981 tcggcggcgc ggtatccgac cggaccgagt cgcgggcccg ggccagcgag tcgaggaacg
     5041 agcgggacgc cggggtcacg aggctgtcgc tcacggccag cggccggggc gcggtggggg
     5101 tgacccgggt ggacgggccg atggcgcagc ccgtcaggct cacggcaaga aggatcgatg
     5161 tgaagcgcat actcattcgg cgtccggaga agcgaccgcc ggcgtggcaa cggcatgctg
     5221 ccggcgacgg aagagcccgc ggtcggccag accccggatc gtggcgaaga agagcgggat
     5281 gaagaagatc ccgacggtgg tggcggtgag catgccgaag agcacgccgg tgccgagcga
     5341 ccgacggctc gccgcgccgg cgccgttcgc gatggcaagc ggcagcacgc cgagaatgaa
     5401 cgcgaacgac gtcatcagga tcgggcggaa ccgctcccgg gccgcttcgg tcgccgcctc
     5461 gacgatcgac attccctggt cccgcagcga ggtggcgaac tccacgatca gaatcgcgtt
     5521 cttggccgcg agacccacca ctgtgatgag tccaacctgg aagtagacgt cgctcgccat
     5581 gccccgcgcg aagaccccga cgaacgcgcc gcagatgccg aagggaatgc cgaggatcac
     5641 ggcgaaggga atcgcccagc tctcgtactg cgccgccagc accaggaaga ccagcaccag
     5701 gcccagggtg aacaccaatc cgctctggcc gctcgaggcc cgctcctgga acgactggcc
     5761 gctgtagccg tagccgatgc cctgggcctc gtacttgtcg gccaccagct tctccaccgc
     5821 gttcagcacc tcacccgagc tccggcccgg ggccggcaca ccggtgatca gcgcggaggt
     5881 gaagccgttg aagcgcgact ggatgctggg tccgccccgg aactcggtgc tggtgagcgc
     5941 cccgatcggc accatgtcgc ccttgctgct gcggacatag agccgggaga tgtcctccgg
     6001 ccgctgccgg aacggcgcct gggcctcggc ctgcacccgg taggtcttcc cgtagaggtt
     6061 gaaatcgttg atgtacaggg tggagaggag cgcctgcagg gtctggaaga gatcggtcag
     6121 cgccaccccg cgggccttgg cggcctcgcg gtccaccttc aggaagagct gcgggacgtc
     6181 ggcccggaag gtggtctgta cccccgccag ctccggcagc ttctgggcgt cgccgatgaa
     6241 gttctgcacg ctggcggcga actgcgggaa ggtctgcccg ccccgcgcct ggagattcat
     6301 ctccaggccc gaggtggtgc cgaggcccgg gatttcgggg aagttgaagg cgaaggccag
     6361 ggtctgcttg agcccgaaga gatgcatgtt ggtacggccg acgatcgcat cgagcgagag
     6421 gtcggcgctg gtccgttcct cccagggctt caggttgacg aagatgatgc cgctgttggt
     6481 ctgggccgag aaactgaggg cgtcgacgcc caccagggcg cccacatgcc gcacgccctt
     6541 gtcggccagc aggaacttct cgacctcgct caccaccgcc tcggtccgct gcttggaggc
     6601 gccatcgggg agctggatcg ccaccgcgaa gaagcccttg tcctccgacg ggatgaacgc
     6661 ctgcggggtg cgccggaaga gcacgaaggt gagggccagg atcaccgcaa aggccgcgaa
     6721 ggtggccttg gggcgcccca ggatccggct cacgccgctg gcatagcggg tggtgagctt
     6781 cccgaaccgg tcgttgaacc agcagaagaa gcggttggtc gactggtccg gcgtagcggc
     6841 gtgctccagc agcaccgcgc agagcgccgg cgtgagcgtc agcgctacca tgccggagat
     6901 caccaccgag agcacgatgg tgacggcgaa ctgcttgtac atctcgccgg tgatgccgcc
     6961 gaggaacgcc accgggatga agacggcgca gagcaccagc acgatcgcca ccagggcgcc
     7021 gcccacctgc cgcattgccc ggtcggctgc gatcctcgcc gagaccttct cgtcggacat
     7081 gatccgttcg acgttttcga tcaccacgat cgcgtcgtcc accacgatac cgatcgccag
     7141 caccaggccg aacagggtca gcacgttcac cgagaagccc agcatcagga gcccgaggaa
     7201 ggtgccgatc accgagaccg gcaccgccag caccgggatc agggtggccc gccagctctg
     7261 gaggaagacg aacaccacca gggtcaccag cagcatcgcc tccgcgagcg tcttcaccac
     7321 ttcgcggatc gactcggtga tgaacggggt ggtgtcgtac ggcagcaccc agctcacgcc
     7381 cgcgggaaag gtccgggaga gctcgttcat ccgctgctcg aagagcttgc gtacatcgag
     7441 ggcgttggag ccggtgcgga gatagaccag caggaaggtg gtgggcttcc cgtcgacccg
     7501 ggccacctgg tcgtagttcc gggcgcccag cgtcaccttc ccgacgtcct tcaccttgac
     7561 cagcgatccg tcgggccggg cccgcaggat gatgttggcg aactgctccg gatcgctgag
     7621 ccgcccctcg gtggtgaccg gcagggtcac ctgggtgccg gccggcgagg gctcgcggcc
     7681 cagccggccg gccgggttgg tggtgttctg ttctcgcacc gccgtcgcca cgtcacccac
     7741 cgtcaggccg agctgggcca gccgatccgg atcgagggag agcagcatcg agaactcgag
     7801 ctggccgaac acccgggcgt tgccgacgcc gggaatgcgc ttgatctcgt cctcgagata
     7861 cagcttggcg tagttggtga ggtacgaggc gtcgtagcgg gaatcgttgg agtagagcgc
     7921 catcgcgaac aggatgtcgc tctgggcctt ggtcaccacg atgccgttgg tccgcaccgc
     7981 ttccggcagc tgcggctcgg ccagcttcac cgcgttctgc acgtcgaccg cggccaggtc
     8041 ctggtcgcgg ttgatgtcga aatagacctg gagattgagg gcgccgtcgg aggagttgga
     8101 cgacttgaag tagagcaacc cgtcgaggcc cgagagctgc tgctcgatcg gggccgccac
     8161 cgcctgggcc acgtcttccg ccgtggcgcc ggggtacacc gccgacacgc tcaccgcggg
     8221 cggcgtgatg agcggatagc ggttgaccgg caggcggagc agggcaaaga gcccgagcag
     8281 ggtgacgacg atggacagca ccgccgccag gaccgggcgg cggatgaaaa agtagcgaat
     8341 ctcggtggag tcgctggtcg aggcggcgct cactggcggc ctccagtgcc ggtacccggc
     8401 gcagagggca tggcagtggc ggtgttcacg ctgtcggcca gcggcaccgg gtgcaccggg
     8461 cggccgggcc cgatcttctg gatcccgtcg accaccaccc ggtctcccga ggtgagaccg
     8521 cgggcgatca gccactgatc gccgttccag ccggtggcct cgacgtcacg cgcctgcacg
     8581 gtatcgcccg ggcccaccac gaacaccatc tgccggccca gctgctgaat caccgcgcgc
     8641 tgcggcacca ggatcgcctt gtcccgctgg aggcccagca cccggatccg cacgaactga
     8701 cccggcagca ggaagcggtc ggcgttggtg aaggcggcgc ggaactgctg cgcgccggtg
     8761 gccgggttga ggaccggatc gacgaaatcg atgcggcccg tcaccggcag gaccgagccg
     8821 tcggagagca ccgcctgcac cttggcgccg ccgccgggag tgagcagccg gctggcgcgc
     8881 ggatcgcgcc gccagtcgag cagctgctgg ccggtgggac tgaaggtgac gtagaccggg
     8941 ctcaggacgt cgatggtggt gaggatgtcg tcgctcccgc gcacccgggt gcccagctcc
     9001 aggttggcgc ggcccacccg gccggcgatc tcggccttca cctcggtgtc ctcgaaatcc
     9061 ttgcgggcct ggtccaccgc ggccctggcg tcttcgactc ccgcacgcgc ctgcttggcc
     9121 tcggcttcgg cgttgtcgta gtcctgccgg gagatcgcgt tgtctgccag cagcggcttg
     9181 agccgcgcga ggttggcctc ggcgttg
//
LOCUS       DATIFF010000806         4121 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_102454, whole genome shotgun sequence.
ACCESSION   DATIFF010000806 DATIFF010000000
VERSION     DATIFF010000806.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4121
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102454"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            94..483
                     /gene="crcB"
                     /locus_tag="VLD58_11710"
     CDS             94..483
                     /gene="crcB"
                     /locus_tag="VLD58_11710"
                     /inference="COORDINATES: protein motif:HMM:TIGR00494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:1903425 - fluoride transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:1903424 - fluoride transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HSB55019.1"
                     /translation="MILLYIAFGSAAGGVLRYLLGGVVQRAAGGTFPLGTLLINITGS
                     FLLGFLYRYSADSAAISAEMRAMLTIGLCGGYTTFSSFSYESVRLLEDGQVGRAMLYV
                     GLSVVLCLAGTALGIVAGKELIALRRG"
     gene            486..827
                     /locus_tag="VLD58_11715"
     CDS             486..827
                     /locus_tag="VLD58_11715"
                     /inference="COORDINATES: protein motif:HMM:NF014677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF190 domain-containing protein"
                     /protein_id="HSB55020.1"
                     /translation="MHGMTGERVLMRIHIGERDHHEGKPLYEAIVQLLRKRGYAGATV
                     TRGIMGFGATAKLHTDKVLRLSVDLPIVVECVDSEEKIEAILPELDGMIGGGLITLEK
                     VRVIAYRGERK"
     gene            complement(981..2780)
                     /locus_tag="VLD58_11720"
     CDS             complement(981..2780)
                     /locus_tag="VLD58_11720"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSB55021.1"
                     /translation="MLAALWLLVAVPANSPDTGTSMFRGGPGHAGVYPAASGSYGGIV
                     WRLQTGGPVRSSPIVSDGVAYVGSNDGNVYAIAVDRGAIRWKYDAGSPVSSTPAVTGS
                     LVVVSAADGSVQAIAKATGRRVWRTATRPDAKLAWGYESGDTWTSSPAVVDGAVLVGS
                     GDGGLYSLDAATGKVRWRAATGGRVRSSPAVSGNQVIVGSYDGKVYAIDRTTGRERWR
                     FATQGVDFKSDTFGYDRKSVQSSPAIAGDVVFAGARDGFFYAIDLATGKQKWRVDHRI
                     SWVNCSAAIADGTVYIGSSDGAFVQALDLGTGQERWRDTVGIVWSSPTVAGNVVYTAT
                     TRGPLFAFDRQSGRELWHVLLSAGTFSSPTIAGDRLYIGNEDGAVYALDLSARAPLRR
                     MVFWDDRLEKISFLADGERMRDWFKARGYEVINSAGVTQALDPSRAAGSVIVFAQDYL
                     MPELVGTDPASGLFRQYLQAGGRVVWPGVPPEIWPRDTTDQLRILAINRHKTEQLLGV
                     SHEGANFDQRGVIRITPAGRAWGLSGWWNAPWAADSAGVSEVLAFDDQGHAAAWIKRY
                     GNAGGMFVRVTVPAVGEGSVPTYSVLQRVAERK"
     gene            2875..>4121
                     /locus_tag="VLD58_11725"
     CDS             2875..>4121
                     /locus_tag="VLD58_11725"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HSB55022.1"
                     /translation="MLRVAIAQFRPDKGEYAANLARLGEVFREVGQWPEPPGLVVAPE
                     AALTGYFLEGGVQELALSAEQLFDDLARVHRESGAPPLDIALGFYELWRNHLHNSALY
                     ASLGGPDAGIRHVHRKVFLPTYGVFDEERFVEPGRVVHAFDTRWGRCAMLVCEDAWHS
                     IMPTLAALDGAEVILVPSATPARGLAPRPGQARPANLDRWDRLAQGIAEEHGVYVIVA
                     HLVGFEGGKGFAGGSIVAGPRGTVLLQAPLFQPATVPVDLDFIEITRARAEAPLLSDL
                     QVRLPHLLKSLENGSGADDQPVVTVPAVQKPAPRRAAPLASSSSSVLEIDPELTRTWL
                     IEFLRDELIRRRKFTRAIVGISGGVDSSLVAFLAAEALGKENVIGVRMPYRTSSSESL
                     DHAQLVVDKLGIQSRTVDISAGV"
BASE COUNT          661 a         1402 c         1391 g          667 t
ORIGIN      
        1 atgcggatgt actggcatcg gaaataggcc ggaggccgga ggcgggaggc cggtgctggt
       61 cgcttcgctt cctcgggacg acacaaacga cgcatgattc ttctctacat cgcgtttggc
      121 agcgccgccg gcggggtgct ccggtatctg ctcggcggcg tggtccagcg cgccgccggc
      181 ggaaccttcc cgctcggcac actgctcatc aacatcaccg gttccttcct gctcggcttc
      241 ctctaccgct actcggccga ctccgcggcg atcagcgccg agatgcgcgc catgctcacc
      301 atcggactct gcggcggata caccaccttc agcagcttca gctacgagtc ggtgcggctg
      361 ctcgaggacg ggcaggtggg gcgggcgatg ctctatgtgg gactcagcgt ggtcctgtgc
      421 ctggcgggga cggcgctcgg aatcgtggcg ggcaaagagc tgatcgcgtt gcggcggggg
      481 tgaccatgca cggcatgact ggcgagcggg tcctgatgcg gattcacatc ggcgaacggg
      541 accaccacga ggggaagccg ctgtacgaag ccatcgtcca gctgctccgg aagcggggct
      601 acgccggcgc caccgtcacc cgcggcatca tgggcttcgg ggccaccgcg aagctccaca
      661 cggacaaggt gcttcgcctc tcggtggacc tcccgatcgt agtcgagtgt gtcgacagcg
      721 aggagaagat cgaggcgatc ctccccgagc tcgacggcat gatcggcggc gggctgatca
      781 cgctggagaa ggtgagggtg attgcgtaca ggggggagag gaagtgagag gggagaaggg
      841 tgaagggaga agtaagaagt aagaagtgag aaggggtttg ggagaccggc ggacgctcgc
      901 tccgctccca gccccttctc ccttctcact ttcacttctc acttctcact tcttacttct
      961 tacttcttac ttcttacttc tcacttcctc tccgccaccc gctgcaacac cgaatacgtc
     1021 ggcaccgacc cttcgcctac cgccggcacc gtcacccgca cgaacatccc gccggcattg
     1081 ccataccgct tgatccacgc tgccgcatgg ccctgatcgt cgaaggccag cacctcgctc
     1141 acgccggctg agtcggcggc ccagggcgca ttccaccagc ccgagagccc ccatgccctg
     1201 ccggccggcg taatccgaat gacgccgcgc tggtcgaagt tggcgccctc gtggctcacg
     1261 ccgaggagct gctcggtctt gtgccggttg atggcgagga tccggagctg gtcggtggtg
     1321 tcgcggggcc agatctcggg gggcacgccc ggccagacca ctcggccgcc ggcctggagg
     1381 tactggcgga agagaccgct cgcgggatcg gttcccacca actccggcat caggtagtcc
     1441 tgcgcaaaga cgatgacact gccggccgcg cgggaggggt cgagcgcctg ggtcacgccg
     1501 gcggagttga tcacctcgta gccgcgagcc ttgaaccagt cgcgcatccg ctcgccatcg
     1561 gccaggaagg agatcttctc gagccgatca tcccagaaca ccatccgtcg gagcggcgcc
     1621 cgggccgaaa gatccagcgc gtagaccgcg ccgtcttcgt tgccgatgta gagccggtcg
     1681 cctgcgatgg tgggagaaga gaaggtccct gccgagagca gcacatgcca gagctcgcgc
     1741 ccgctctgcc ggtcgaaggc gaagagcggc ccgcgggtag tggcggtgta gaccacgttg
     1801 cccgccaccg tgggagaact ccacacgatg cccaccgtgt cgcgccaccg ttcctggccg
     1861 gtgccgaggt cgagcgcctg gacgaaggcc ccatccgagc tgccgatata gaccgtgccg
     1921 tcggcgatcg cggccgagca gttcacccac gagatccggt gatcgacccg ccacttctgc
     1981 ttgccggtgg cgagatcgat ggcgtagaag aacccgtcgc gggcgccggc gaacaccacg
     2041 tcgcccgcaa tcgccggaga tgattggacc gacttgcggt cgtagccgaa ggtgtcggat
     2101 ttgaagtcca cgccctgggt ggcgaagcgc caccgctccc ggccggtagt acggtcgatg
     2161 gcgtagacct ttccgtcgta gctccccacg atcacctggt tgcctgatac ggccggtgag
     2221 gaacgcaccc gtccgccggt cgcggcgcgc catcgcacct tcccggtcgc ggcatccagc
     2281 gagtagagcc caccatcgcc actgcccacc agcactgcgc cgtcgaccac cgcgggtgac
     2341 gaggtccagg tgtcaccgct ctcgtagccc caggcgagct tcgcatccgg cctggtcgcg
     2401 gtgcgccaga cacgccggcc ggtcgccttc gcgatggcct gcaccgaccc atccgccgca
     2461 gagacgacca cgaggctgcc cgtcaccgcc ggcgtcgaac ttaccggcga gccggcgtcg
     2521 tacttccagc gaatcgcgcc ccggtccacc gcaattgcgt acacgttccc atcgttgctc
     2581 ccgacatacg cgactccgtc gctcacgatg ggcgaggacc gcaccgggcc gccggtctgc
     2641 agccgccaga cgatgccgcc atagctcccg ctcgccgccg ggtacactcc ggcgtggccc
     2701 gggccgccgc ggaacatgct ggtgccggtg tccggggaat tggcgggcac ggcgacgagc
     2761 agccagagag ctgccagcac gaagacctcc tggtggggtg ggttcggtcg ggtgagtcgg
     2821 ggccgctacg gggccgccat gtaaaaggat tcaccgccga gtacatttcc gcgcatgctc
     2881 agagtcgcca ttgcccagtt ccgtcccgac aagggagagt acgccgccaa cctggcccgg
     2941 ctgggtgagg tatttcgcga agtggggcag tggcccgaac cgccgggtct ggttgtggcg
     3001 cctgaagccg cgctcaccgg ctacttcctc gaaggtggcg tccaggaact ggcgctcagc
     3061 gccgagcagc tctttgacga tcttgcgcgg gtgcaccgcg agtccggggc gccgccgctc
     3121 gacatcgcgc tcggcttcta tgagctctgg cgcaatcatc tccacaattc ggcgttgtac
     3181 gcgagcctgg gcgggcccga cgccgggatc cggcatgtgc accgcaaggt gttcctgccg
     3241 acctacgggg tgttcgacga agagcggttc gtcgagccgg gccgggtggt ccacgcgttc
     3301 gacacccgct ggggccgctg cgccatgctg gtgtgcgaag atgcctggca ctcgatcatg
     3361 ccaacgctcg ccgcacttga tggcgcagag gtgatcctgg tgccgagcgc cacgcccgcg
     3421 cggggactcg cgccccggcc ggggcaggcg cgccctgcca acctcgaccg ctgggaccgg
     3481 ctggcgcagg gcatcgccga ggagcacggc gtttacgtca tcgtggcaca cctggtgggc
     3541 ttcgaaggcg ggaagggctt tgccggcgga tcgatcgtgg cggggccccg cggcacggtg
     3601 ctgctgcagg cgccgctctt tcagccggcg acggtgcccg tcgacctcga cttcatcgag
     3661 atcacccgcg cgcgcgccga ggcgccgctc ctctccgatc tccaggtgcg gctgccgcac
     3721 ctgctcaaga gcctcgagaa tggaagcggg gccgacgacc agccggtggt caccgttccc
     3781 gccgtgcaga agccggctcc ccggagagcg gctccgctcg catcatcctc gagcagcgtc
     3841 ctcgaaatcg acccggagct cacccgcacc tggctcatcg agttcctgcg cgacgagctg
     3901 atccgccgcc gtaagttcac gcgcgcgatc gtggggatct cgggcggggt cgacagctcg
     3961 ctggtggcgt tcctcgcagc cgaggcgctg ggcaaggaga acgtgatcgg ggtgcggatg
     4021 ccgtatcgca cttcgagctc ggagagcctc gatcatgccc agctggtggt cgacaagctg
     4081 gggatccaga gccgcacggt cgacatcagc gccggggtgg a
//
LOCUS       DATIFF010000807         5545 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1487398, whole genome shotgun sequence.
ACCESSION   DATIFF010000807 DATIFF010000000
VERSION     DATIFF010000807.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5545
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1487398"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1997
                     /locus_tag="VLD58_11730"
     CDS             <1..1997
                     /locus_tag="VLD58_11730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55023.1"
                     /translation="FTGPTAQAVIAKVMTTEPVSLTSQRKSVPPAVDDAVLTALQKLP
                     ADRFATAAEFALALAGGRVPGTATGAVRAAHSGPGPWRAIALGLGVLSVGLLVLALRA
                     AGRNSRAGPTVYDAVLPDSATMSFAVTSSNVAYGEPLRNISIAPAGDFAVYAARQGDS
                     TELWYRSLRDGETHRLNGTQGGTAPRLSPDGTRVAFLRGDRVMLLSLAGGEPRQLLEG
                     GSTDALGWLSNTQVGAGTDDGNKFNWIDAAGGNPRTRVIARCPFGRWIPDLARLVCSY
                     NRNGFVLDPESGAIASIRAARPDGSAGELVAGTAFYVVDRRYLVYLSTNGTLLGARFD
                     AEKQLAYRPVTLLTGLRREALGEGQFDISANGTLVYAPGIDATIGRLVTLHAAGVPQP
                     LPMESGDFQRFDLSRDRRWVAASVQGSESNELRVYDLQNGQHFTWQRGGTIRHPLWSP
                     AGDRLLYALRDSTRWAILRGAPGSGARPDTLASSTYDSFSLDPTDYQGEHLALAQSWG
                     GSVVTRFDPGAPRAAFDTLVTGARFASVSPSQKLILYQTLDGNEVIATRLDMSGRRWQ
                     LASEGVEPLWLSPTEVLYRLGIAWYLVKLNPETGEPLGPPAFWNRDSRFSDTSGWSNR
                     PSHDGGIIYVQGPSQNGSAYLRVIPDWVRQMKAAVDSAGR"
     gene            2032..2274
                     /locus_tag="VLD58_11735"
     CDS             2032..2274
                     /locus_tag="VLD58_11735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55024.1"
                     /translation="MTVGYRRFTDTEGQEWEVRDLSRSAWEFVPVQGNPGKSQRIDPP
                     GYEADPFELSEEELQRLLGKPGGPARARPSRNPFKD"
     gene            2322..3503
                     /locus_tag="VLD58_11740"
     CDS             2322..3503
                     /locus_tag="VLD58_11740"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: protein motif:HMM:NF002872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006002 - fructose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent 6-phosphofructokinase"
                     /protein_id="HSB55025.1"
                     /translation="MKRTIAILTGGGDVPGLNPAIRAITIRAVRDGHRVLGIRRGWAG
                     LVDYLPDPKADNSENVQPLSEAIVNRAGRTGGTFLHTSRTRPSHLPRERMPPHLTGYT
                     EPINDVTRDVLRNLEHMGVDVLIPIGGDDTLSYGKRLHDEGVNVVAIPKTMDNDVYGT
                     DYCIGFSTCVTRTIELTHRLRTSAGSHERFLVIEVFGRYAGFTALVPSMAGAADRCLI
                     PEHPADIEQLAELLTGDRNRNPSRYAVVLVSEGARLNTHDGMSFEGEETDMFGHRKLG
                     GIGDQVAAALKEYSGKYNRGRRIDVVSQRLGYLVRSGDPDALDSIVPMAFGNLALDLV
                     FRNQFGRLVSVHRGHYDSVPISSVTSEKKVVNVPRYYNTDRLRPIYDFDGAPLFIMTS
                     D"
     gene            3545..>5545
                     /locus_tag="VLD58_11745"
     CDS             3545..>5545
                     /locus_tag="VLD58_11745"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB55026.1"
                     /translation="MSTIEALTKALADRYRIERELGQGGMATVYLAQDLKHDRKVAVK
                     VLRPELAAMLGADRFLLEIRTTAGLQHPNILPLFDSGSADGFLYYVMPFVEGESLRDR
                     MQRERQLPVAESVAITAQVAAALAHAHERGIVHRDIKPDNIMFSSGQAVVADFGIARA
                     VGAAGGEQLTVTGMAVGTPAYMSPEQSAGESEVDGRSDLYSLASVLYEMLAGEPPFTG
                     QTAAAIISKRLAAPTPAVRVVRATVPERVDQALQRALQRTPADRFRTVTEFAEALRAE
                     SLSPRTRPSMRAALGVAGIVGALALAAAGWWALRGARVTGDLHPDVIMVLPFRVGGDP
                     AIAYLRESMLDLLNARLTGLTGPRILEPRTTLSAWRRALPSGADDLPEEESRRLAARL
                     GAGRVLLGSAIATPTELTLSGTLLRVSDGAVLANGSVAGMADSIAVLVNRLTARVLSL
                     GAGEERERLDGLAATSLEALQDYLAGQQAYRRGDYFAAMDRFGSAFRHDTTFAQAAFG
                     LVTTNPLIGTVSRVDGLLAIPTVWRLRGRLSVRDLALFRGMPFVGPNYPGPSTYAEII
                     AQAEEAAAGAPDSPEQWLQLGMSLTFYGAVASVANWRGRAVEALDRAVALDSSFTPAV
                     QARLFMASWLRDRETSRRLAALLEEPVRLGFADATMSWAAAVT"
BASE COUNT          853 a         1989 c         1845 g          858 t
ORIGIN      
        1 ccttcaccgg cccgaccgcc caggcggtca tcgccaaggt gatgaccacc gagcccgtca
       61 gcctcacgtc gcagcggaag agtgtaccac cggcggtcga cgacgcggtc ctgaccgcgc
      121 tccagaagct cccggccgac cgattcgcca ccgcggcgga attcgccctc gccctcgccg
      181 gcggcagggt ccccgggacc gcgactggtg cggttcgggc ggcccactcg ggcccggggc
      241 cgtggcgcgc catcgcgctc ggactcggcg tcctctccgt cgggttgctg gtgctggcgc
      301 tccgggcggc cggcaggaac agccgggccg gccccacggt gtacgacgcc gtgctgccgg
      361 acagcgccac gatgagtttc gcggtcacct cgtccaacgt cgcctatggt gagccgctca
      421 ggaacatctc catcgccccc gcaggcgact tcgcggtcta tgccgcccgc cagggcgact
      481 ccaccgagct ctggtatcgc agccttcgtg atggcgagac tcaccggctg aacggcaccc
      541 agggcgggac cgccccccgg ctctcacccg acggcacccg ggtcgccttc ctccggggtg
      601 accgggtcat gctcctctcg ctcgccgggg gcgagccgcg gcaactgctg gagggtggaa
      661 gcaccgatgc gctcggatgg ttgtcgaata cccaggtggg ggccgggacc gacgacggca
      721 acaagttcaa ctggatcgac gcggccggtg gaaacccccg caccagggtg atcgcccgct
      781 gccccttcgg ccgatggatt ccggacctgg cccggctggt gtgttcctac aaccgcaacg
      841 gattcgtcct cgaccccgag tcgggcgcga tcgccagcat ccgggcagcg cggcccgatg
      901 gcagcgccgg tgagcttgtg gcgggcaccg ccttctacgt ggtcgaccgc cgctacctgg
      961 tctatctcag caccaacggc acgctgctgg gcgcccggtt tgacgccgag aagcagctcg
     1021 cctatcggcc ggtgacgctc ctcacgggat tgcggcgtga ggcgctgggc gagggtcagt
     1081 tcgacatctc ggccaacggc accctggtct acgcccccgg catcgatgcg accatcggac
     1141 ggctggtgac cctgcatgcg gccggagtgc cgcaaccgct cccgatggaa agcggcgact
     1201 ttcaacgctt cgatctgagc cgggaccgcc gctgggtggc cgcctcggtc cagggcagcg
     1261 aatcgaatga actgcgggtg tacgatctcc agaatggcca gcacttcacc tggcaacggg
     1321 gtggaaccat ccgccatccg ctctggagtc ccgccggcga ccgcctgctc tacgcccttc
     1381 gggattccac ccgctgggca atcctgcgag gagcccccgg gtctggtgcc cggcccgata
     1441 ccctcgccag cagcacctat gactcgttct ccctcgatcc caccgactac cagggcgagc
     1501 acctggcgct ggcccagagc tggggcggat cggtggtcac ccgtttcgac ccgggcgccc
     1561 cgcgcgcggc attcgatacg ctggtgacgg gggcccgttt tgcctcggta tcgcccagcc
     1621 agaagctgat tctctaccag accctcgacg ggaatgaagt catcgcgacc agactcgaca
     1681 tgtccgggcg tcgctggcag ctcgcttcag agggagtcga gccgctctgg ctctcgccga
     1741 ccgaagtgct ctatcgtctg gggatcgcct ggtacctggt caagctcaat ccggaaaccg
     1801 gggaaccact cggtccacca gcgttctgga atcgtgactc gcgcttctcc gacacctcgg
     1861 ggtggtccaa ccgtccttcg cacgacggtg gcatcatcta tgttcagggt ccgtcgcaga
     1921 atggctcagc ctatcttcga gtcatccccg actgggtcag acagatgaaa gctgccgtgg
     1981 atagcgccgg ccgctgatct cgagcggcgc tggcgccgca actcatggag catgaccgtg
     2041 ggctatcgtc gcttcaccga tacggaaggc caggagtggg aggtgcgcga cctctcccgc
     2101 tcggcctggg agttcgtgcc tgtccagggt aatccaggga agagccagcg gatcgatccg
     2161 ccggggtatg aggcggatcc gttcgagctg agtgaggagg aattgcagcg gctgctggga
     2221 aagccgggcg gcccggctcg ggcccgcccg tcccggaatc ccttcaagga ctgatgccgc
     2281 ggcataccac accgtccaac cgtcttgcac agcagtgaac catgaagcgc accatcgcaa
     2341 ttctcacggg cggcggcgat gtccccggtc tcaaccccgc catccgagcc atcaccatcc
     2401 gcgcggtgcg ggatggacac cgggtcctgg gcatccggcg gggctgggct ggtctggtgg
     2461 actacctgcc cgatcccaag gccgacaaca gcgagaacgt gcagcctctc tccgaggcca
     2521 tcgtcaaccg ggccggccgg accggcggca cctttctcca tacctcgcgg acccggccca
     2581 gccacctgcc ccgcgagcgg atgccgcccc acctgaccgg ctacaccgag ccgatcaacg
     2641 acgtgacccg agacgtgctc cgcaatctgg agcacatggg cgtggacgtg ctcattccca
     2701 tcgggggcga cgataccctc agctatggca agcggctcca cgacgaaggg gtcaacgtcg
     2761 tcgccattcc caagaccatg gacaacgacg tctatggcac cgactactgc atcggattca
     2821 gtacctgtgt tacccgcacc atcgagctga ctcaccggct gcggacttcg gccgggtccc
     2881 acgagcggtt cctggtgatc gaagtcttcg ggcgatacgc cgggttcacc gccctggtgc
     2941 cctcgatggc cggcgcggcc gaccgctgcc tgattccgga acatcccgcc gacatcgagc
     3001 agctggccga gctgctgacc ggagaccgta acagaaaccc cagccgctac gcggtggtgc
     3061 tggtgtccga aggcgcgcgc ctcaacactc atgacgggat gagcttcgag ggcgaggaga
     3121 ccgacatgtt cggccaccgg aagctgggcg gaatcggcga ccaggtcgcc gcggcgctca
     3181 aggagtattc cgggaagtac aacaggggac ggcggatcga cgtggtgagc cagcggctgg
     3241 gctacctggt ccgttcaggg gatcccgacg ccctcgactc gatcgtcccg atggccttcg
     3301 gcaacctggc cctggacctg gtcttccgga accagtttgg ccgcctggtc agcgttcacc
     3361 gggggcacta cgacagcgtg ccgatctcga gcgtgacctc ggaaaagaag gtggtgaacg
     3421 tcccccgcta ctacaacacc gaccggttgc gcccgatcta tgacttcgac ggggcgccgc
     3481 tgttcatcat gaccagcgac tgagattcgt cgaccgagac caactcgaga ggtgcggtac
     3541 agccatgagc acgatcgagg cgctcacgaa ggccctcgcc gaccgctacc gcatcgagcg
     3601 cgaactcggc cagggcggca tggcaaccgt gtacctcgcc caggatctca agcatgaccg
     3661 caaggtcgcg gtcaaggtgc tacgccccga gctggccgcg atgctcggcg ccgaccgctt
     3721 tctgctggag atccggacca ccgcgggcct ccagcacccg aacatcctgc cgctcttcga
     3781 ctcgggcagc gccgacggtt tcctctatta cgtcatgccc ttcgtcgagg gcgagtcgct
     3841 gcgcgaccgg atgcagcgcg agcggcagct gccggtggcc gagagcgtcg cgatcacggc
     3901 gcaggtggcg gcagccctcg cccatgcgca cgagcgtggc atcgtccacc gcgacatcaa
     3961 gcccgacaac atcatgttct cgagcggcca ggcggtggtc gccgacttcg gcatcgcgcg
     4021 ggccgtcggc gcggccggcg gggagcagct caccgtcacc gggatggccg tcggcacgcc
     4081 ggcgtacatg agtccggagc agtcggcggg tgaatccgag gtcgatggcc gctccgacct
     4141 ctactccctc gcgagtgtgc tgtacgagat gctcgcgggc gagccgccgt tcaccggcca
     4201 gacggccgcc gcgatcatct cgaagcgcct tgccgcgccc acgcccgcgg tgcgggtggt
     4261 gcgtgcgacc gtaccggaga gggtcgacca ggcactccag cgggcgctcc agcggacacc
     4321 ggcagaccgc ttccggacgg tgacggaatt tgccgaggcc ctccgggccg agtctctgtc
     4381 gccccggacg cgtccctcga tgcgcgccgc gctgggggtg gccggaatcg tcggggcgct
     4441 tgcgctcgcc gccgccgggt ggtgggctct ccggggcgcg cgcgtcaccg gcgacctcca
     4501 tcccgacgtg atcatggtcc tgccgttccg cgtgggcggt gatccggcga tcgcgtacct
     4561 gcgcgagtcg atgctcgacc tgctgaacgc gcgcctgacc ggcctgaccg ggccgcgaat
     4621 cctcgagccc cgcaccacgc tcagcgcctg gcgccgcgcc cttccgtcag gagcggacga
     4681 cctgcccgag gaggagtccc gccgcctcgc ggcccggctc ggcgccggac gggtgctcct
     4741 cggcagcgcg atcgcgaccc cgaccgagct caccctgagc ggtaccctgc tccgggtctc
     4801 cgatggcgcc gtcctcgcca acggctcggt ggcgggaatg gccgacagca tcgcggtgct
     4861 cgtcaaccgc ctcaccgcgc gggtcctgag cctcggcgcc ggcgaggagc gcgagcggct
     4921 cgacggcctc gcggcgacgt cactagaagc gctgcaggac tacctcgccg gccagcaggc
     4981 ctatcgccgg ggcgactact tcgcggcgat ggaccgtttc ggcagcgcct tccgccacga
     5041 taccaccttc gcgcaggccg ccttcggtct cgtcaccacc aatccgctga tcgggaccgt
     5101 ctcccgggtc gacggactgc tcgcgatccc caccgtctgg cggctccgcg ggcggctgag
     5161 cgtccgcgac ctcgccctct tccgcggcat gccgttcgtc gggccgaact atcccggccc
     5221 ctcgacctac gccgagatca tcgcgcaggc ggaagaggcg gccgcgggag cacccgacag
     5281 tcccgagcag tggctgcaac tcggcatgtc gctcaccttc tacggcgccg tcgcgagcgt
     5341 ggcgaactgg cgggggcggg ccgtcgaggc gctggaccgc gcggtcgcgc tcgactcgag
     5401 cttcaccccc gcggtgcagg cgcgcctctt catggcgagc tggctgcgcg accgggagac
     5461 gagccggcgc ctggccgcac tcctcgagga gccggtgcgc ctgggcttcg cggatgcgac
     5521 gatgtcgtgg gcggccgcgg tgact
//
LOCUS       DATIFF010000808         1037 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1026171, whole genome shotgun sequence.
ACCESSION   DATIFF010000808 DATIFF010000000
VERSION     DATIFF010000808.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1026171"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..557
                     /locus_tag="VLD58_11750"
     CDS             <1..557
                     /locus_tag="VLD58_11750"
                     /inference="COORDINATES: protein motif:HMM:NF013226.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="protoheme IX farnesyltransferase"
                     /protein_id="HSB55027.1"
                     /translation="ALASNGLTGSLGFLALVSYVAAYTPLKPRSPMAMLVGAIPGSLP
                     PLMGWTAVTGRIGLGGLLLFGILFAWQMPHFLAIALFRKEEYRNAGYLALPLVRGDDA
                     TRIWMLLWTVLLVAVSVLLFPFGVAGPLYLAVAVALGGAFLVLVIRGVVRREQRAWAR
                     QTFLFSLVYLAGLFAALLLSARAH"
     gene            complement(654..726)
                     /locus_tag="VLD58_11755"
     tRNA            complement(654..726)
                     /locus_tag="VLD58_11755"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(691..693),aa:Ile,seq:cat)
BASE COUNT          133 a          364 c          352 g          188 t
ORIGIN      
        1 tggccctggc gagcaacggg ctgaccggct cactcgggtt cctggccctg gtgagctacg
       61 tcgcggcgta caccccgctc aagccgcgga gcccgatggc gatgctggtc ggggccatcc
      121 ccggttcgct cccaccgctg atgggatgga ccgcggtgac cgggcgcatc ggtctcggcg
      181 gcctccttct cttcggcatc ctcttcgcgt ggcagatgcc gcacttcctg gccatcgccc
      241 tgttccgcaa ggaggagtac cggaacgccg gttacctggc cctgccgctg gtgcgcggcg
      301 acgacgcgac ccgaatctgg atgctgctct ggacggtgtt gctcgtcgcc gtgagcgtgc
      361 tgctcttccc gttcggcgtg gcgggcccgc tctatctcgc ggtggcggtg gcgctcggcg
      421 gggcgttcct ggtgctggtc attcgcggcg tggtgcgccg cgagcagagg gcctgggcca
      481 ggcagacctt cctcttcagc ctcgtctacc tcgccgggct cttcgccgcg ctgctcctct
      541 ccgcgcgcgc ccactgagtc ggtggcgcgc tccgacgcgc ttcgacgagc gtccctctga
      601 ctgaagtttt ccggtgtccc ggacagcccg ggacaccgga cgggtgtgac gagtgggccc
      661 tccaggattc gaacctggga ccaatcggtt atgagccgac agctctgacc gctgagctaa
      721 gggcccggac ggtgaccaca tcctggtaca ccggcgccgt ccggtccaca gcggacgaaa
      781 ccttgccgcg tgacgacgga gaggggagca tcgtcctgcc gggcgccgat gagcgggctc
      841 ttgcaccgtc ctcttcgccc gcacccccgg aggacaccgg atgtcatttc acggaagact
      901 cgccgcgctg ggccttctgg tctgtgcgct gtcggccgag gcggccccga agatcaccat
      961 cgctccgatc accggcgaca agaagtcgca ggtggggagt cagatctcgg ccgcgctctg
     1021 ccggacgtac acctgcg
//
LOCUS       DATIFF010000809         1203 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2102619, whole genome shotgun sequence.
ACCESSION   DATIFF010000809 DATIFF010000000
VERSION     DATIFF010000809.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2102619"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..859
                     /locus_tag="VLD58_11760"
     CDS             <1..859
                     /locus_tag="VLD58_11760"
                     /inference="COORDINATES: protein motif:HMM:NF017733.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssF"
                     /protein_id="HSB55028.1"
                     /translation="SEPVLLTHQQYEYQVVPDARRRTTTEVFSVDEVFGVQQDATEPL
                     RFEPLFSFRHGRGGTGDLFWQAARRPSGWRLDQGTDIWLSFADLEGRTLTPGLDAITC
                     RLTCFNSDLPSRLPFGLDQGDFELPSGGPIRRITALVKPTGVIHPPLGKKQMWRLISL
                     FSLKYIAILEGGAEGLQDLLRLFNMSDNLASERQIQGIRSLSGKPVFSRVATEHGIAF
                     ARGHRVELDVDEEQFAGGGLYLFASVLERFLGLYASLNSFSQLVVRSQQRKTPLREWA
                     PRAGWKPLI"
     gene            841..>1203
                     /locus_tag="VLD58_11765"
     CDS             841..>1203
                     /locus_tag="VLD58_11765"
                     /inference="COORDINATES: protein motif:HMM:NF018675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssG"
                     /protein_id="HSB55029.1"
                     /translation="METADLIRLDPTERLLQDPTAFRFFQAIRLLERARPERGPVGGF
                     ADPAEEVARFGVPPSLAFPASEIQSLDDAEDDPARMQVNFFGLTGPLGVLPYHYTQLV
                     AERLRSKDPVLRDFFDIFH"
BASE COUNT          167 a          413 c          425 g          198 t
ORIGIN      
        1 ctcggagccg gtgctgctga cccaccagca gtacgagtac caggtggtgc ccgatgcccg
       61 gcggcgcacc acgaccgagg tgttctcggt ggacgaggtc ttcggggtgc agcaggatgc
      121 cacggagccg ctgcggttcg agccgctctt ctcgttccgc cacgggcggg gcggcaccgg
      181 cgacctgttc tggcaggcgg cgcggcggcc gagtggctgg cgtctcgacc agggaacgga
      241 catctggctt tcgttcgccg acctcgaggg gcggaccctg acgccggggc tcgatgcgat
      301 cacctgccgg ctcacctgct tcaacagcga tcttcccagc cggctcccct tcgggctgga
      361 ccagggcgac ttcgagctgc cgagcggcgg gccgatccgc cgcatcacgg cgctggtcaa
      421 gccgaccggg gtgattcatc ccccgctcgg caagaagcag atgtggcgcc tgatctcgct
      481 gttctcgctc aagtacatcg ccatcctcga gggcggggcc gaggggctgc aggacctgct
      541 ccggctcttc aacatgagcg acaacctggc gagcgagcgg cagatccagg gcatcaggag
      601 cctctccggc aagccggtct tctcccgggt ggccaccgag cacgggatcg cgttcgcgcg
      661 cgggcaccgg gtggagctgg acgtggacga ggagcagttc gccggcggcg gcctgtatct
      721 ctttgccagc gtgctggagc ggttcctggg gctgtacgcc tcgctcaaca gcttctctca
      781 gctggtggtc cgcagccagc agcgtaagac gccgctgcgc gagtgggcgc cgagggccgg
      841 atggaaaccg ctgatctgat ccgcctcgat ccgaccgagc ggctgctcca ggacccgacc
      901 gccttccgct tcttccaggc gatccggctg ctggagcggg cccggccgga gcgcggcccg
      961 gtgggcgggt ttgccgaccc cgcggaggag gtggcgcgct tcggggtgcc gccgtcgctg
     1021 gcctttcccg cgagcgagat ccagtcgctg gatgacgccg aagatgaccc ggcccggatg
     1081 caggtcaact tcttcgggct caccggcccg ctcggcgtgc tcccgtacca ctacacccag
     1141 ctggtggcgg agcggctccg gagcaaggac ccggtgctgc gcgacttctt cgacatcttc
     1201 cat
//
LOCUS       DATIFF010000810         7300 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1948768, whole genome shotgun sequence.
ACCESSION   DATIFF010000810 DATIFF010000000
VERSION     DATIFF010000810.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7300
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1948768"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(156..1499)
                     /locus_tag="VLD58_11770"
     CDS             complement(156..1499)
                     /locus_tag="VLD58_11770"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HSB55030.1"
                     /translation="MTAVPATAPAQRGRLLQILGVAFGLAVIIGNTIGVGILRTPGDV
                     AGHLPDARWFLGAWLLGGVYALLGALSLAELGAMVPESGGQYVFVRRALGEYAGFAVG
                     WSDWLSSCAAMALVTVSMGDYTAAVFPALQGKSVWFALAITTILTVIQALGIRAGDLT
                     QQISSLLKTLVLVALAGVCLAYSPSVPADAAMAPAPHVIGFSAIVLALQGVIYTYDGW
                     NGMLYFGGEVKNPGRDIPRAMAGGVLAVIAIYLLLNVAFLHVLTPARMAGQDLVAATA
                     AREIFGDRGDTVVRAILLVSLFSAANAILLIASRLPYAMSRDGMLWRGFRRVSESGTP
                     RPSLVMSALATALLLITGTFDQILALAAFFYVVCYTGSFISVFILRAREPGTPRPYKA
                     FGYPWVTGFLVIGSLAFLVGNVVSDTRNSLVELGILVASYPVFLLVQRGKAALRR"
     gene            complement(1496..2461)
                     /locus_tag="VLD58_11775"
     CDS             complement(1496..2461)
                     /locus_tag="VLD58_11775"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HSB55031.1"
                     /translation="MPILAITEQRDGSLRKVSLEVLTAARRLADQLGTTADALVLSAG
                     SVTGADQLGRYGADRVLAATHGEFSLYQPDGYSATIAEVAKGYTAVVFAATATGRDLA
                     PRVAARIGVGLATDVTEFAAEGGKIVVTRPVYAGKALQKLRLEGTPALLSIRPNTVQP
                     TESARAGTAAAAAVPGFTIRARVTGVKAPASAALDVAEAPVVVSGGRGLKEPEQFKLL
                     EDLAAAFGNAAVGASRAVVDAGWREHGAQVGQTGKTVSPGLYVAVGISGAIQHLAGMR
                     TARTIVAINRDKDAPIFKVADYGIVGDLFEIVPRLTAEVKKLKSE"
     gene            complement(2464..3213)
                     /locus_tag="VLD58_11780"
     CDS             complement(2464..3213)
                     /locus_tag="VLD58_11780"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HSB55032.1"
                     /translation="MKIAVCLKRVPDTTTKIVLGADGKAIDENGVKFVPNPYDEYAIE
                     EGLKLKEAAGAGEVVVLSLGTDAAQETLRTALAMGADRAILLQAQAPADGLEAAKALA
                     AELKAGGYDLILFGKLAVDDYNHQVGPMVGELLELPTITSIAHLGISGGTVTADREIE
                     GGIESVTCALPAVLTCDKGLNTPRLPSLKGIMAAKKKPLEVKPVSLGAGSLVSLGLSL
                     PAERKAGRIVGEGADAVPELVRLLREEAKAI"
     gene            complement(3328..5484)
                     /locus_tag="VLD58_11785"
     CDS             complement(3328..5484)
                     /locus_tag="VLD58_11785"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HSB55033.1"
                     /translation="MQRILLASTLILAASPLGAQQRDSTKRDTTVVELAPIEVVGSIL
                     PSAGPVVGSGVPARVTVLNRGDIEANEPRLLTDLLVSQAGFSSYDDLGAAAKMSLASR
                     GFFASPVVGLPQGISVFLDGIRQNEPDAAQVNFDLLPMEHLTRIELLSGTASLLGRNS
                     LGGAINLVSNQGGGPTRGELEVSGGNYKTLGTDASLSGSLGGGKWSYYAGGGYDREDG
                     WRQDTFSKQYNGFFNVGRLTERWGLRLQGYGARSRAQAAGSLPESVYQTNPDSNLTTG
                     DFEDLNNLQLAVSGYTRSPHSQLSASAYIRRHRAERFNVNQPADPDNLGKSRNRILGG
                     NVDYRVDRTVGRSKLGLRIGADGSASHADVQLFADSTKFGGSQLQTTFVKSPTWDVGA
                     FGIADLTTGPVTLSAGARYDYVRIPFRNQLDPSRDTTSSYSRLSPRGGISWTASQTLT
                     LYGSVGTSFRAPAVIELACSDENEPCPLPFALGDDPPVKPVRATTYEIGGKLIAGTSI
                     FTASAYRTDVKDDIFLFASDTAISGSTIEGFFGNLDRTRRTGLEFSVQTFVTGGHSLY
                     ANYAYTLATFQSAAEIFSIREDFGGSNAVRPGDQLPLVPNHQVKVGGSFVLPKGFFTG
                     VDGRYIGPQYLRGDEANVEPKLKGYFVADARLGWRGAGWEITAIANNLFQHKYATFGT
                     FNVNQGAGDALERFLSPGQRRLVRLVVRRNFGGDSD"
     gene            complement(5608..6174)
                     /locus_tag="VLD58_11790"
     CDS             complement(5608..6174)
                     /locus_tag="VLD58_11790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55034.1"
                     /translation="MTGQDDLDRELREIGFAPRASLGAEIRGRAARGEEPRRFAPQQR
                     RPAILAAAATVVLGLVSFAGWQTSRQRLVAVDHCCQDLDGGGTADDGVLIVSQAGVKV
                     QDLRIYEDVDRSGGYSPGDPVRFLRGGAPAVAGPVDGGETREFCCLDYDGGGPSDDAL
                     VVVGRAPDLITMAAIYERTAPGAQAKLR"
     gene            complement(6171..6752)
                     /locus_tag="VLD58_11795"
     CDS             complement(6171..6752)
                     /locus_tag="VLD58_11795"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSB55035.1"
                     /translation="MADQPGSINLPHAPTALPGHPPGGGEGVAGDWYVTYGRAVYSYV
                     RFHLPSADAAEDVTADTFLKVFRAAGQYDPARAQPQTWIFRIAQNTLRDHLRKDRVRR
                     HVPLGSMRDLVCDAPSAEERLLWEERVARLLDAVSTLAEADREIIGLRYGSGMDTADV
                     AEVLGIRESAVRTRLWRALARLRRVLDQDEEEA"
     gene            complement(6823..>7300)
                     /locus_tag="VLD58_11800"
     CDS             complement(6823..>7300)
                     /locus_tag="VLD58_11800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55036.1"
                     /translation="ESVLDIGRRQSYDPNPGASDRAVVEDDIEVTIEPQEGTYRQSEE
                     RLALGSVVAELQNHSQKPLRKYALAPGGRSYWVVYKKKDQWLSAFIAESPNRDLDRFD
                     VPTVIHPPTRAWRQSIAQWQLRGILERSRPGGADLMAEEVLPWTTCLAKGCCKVGD"
BASE COUNT         1183 a         2466 c         2517 g         1134 t
ORIGIN      
        1 aggatctcga agcgccgatc atccgccagc gcctttgcga cgcgttccag ctcctcggca
       61 cccaaccgca tcatgcgacc ccctcagcaa cggatatata gataatcatc tatgtatcga
      121 tgtcaatccc gggacccggc agcagcctgc gggggtcagc gacgcagtgc cgctttcccc
      181 cgctgcacca gcaggaagac cgggtaactg gcgaccagaa tccccagttc caccaggctg
      241 ttccgggtgt cgctcaccac gttgcccacc aggaacgcca gggacccgat gaccaggaag
      301 ccggtcaccc agggatagcc gaatgccttg tatggtcgag gagtgccggg ctcgcgcgcc
      361 cgcaggatga agactgaaat gaaggagccg gtgtaacaca ccacgtagaa gaatgccgcc
      421 agggccagga tctgatcgaa ggtgccggtg atcaggagca gcgccgtggc cagcgccgac
      481 atcaccagcg agggtcgcgg cgtgccgctc tcgctcaccc gtcggaagcc gcgccagagc
      541 atcccgtccc ggctcatggc gtagggcaac cgggaggcaa tcaggagaat cgcgttggcc
      601 gcgctgaaga ggctcaccag cagaatcgcg cggaccacgg tgtcgccccg gtcgccgaag
      661 atctcgcgcg ccgccgtcgc cgcgaccagg tcctgccccg ccatccgggc cggggtgagc
      721 acatgaagaa acgcgacgtt gagcaggagg tagatggcga tgacagcgag gaccccaccc
      781 gccatcgcgc gcgggatgtc gcggccggga ttcttcacct cgccaccgaa gtagagcatc
      841 ccgttccagc catcgtaggt gtagatcacg ccctggagcg ccagcacgat cgcgctgaac
      901 ccgatcacgt ggggagcggg cgccattgcc gcgtcggccg ggaccgacgg cgaatacgcc
      961 agacagacgc ccgccagcgc caccagcacc agggtcttga gcaggctgct gatctgctgg
     1021 gtcagatccc cggccctgat acccagcgcc tggatgactg tgaggatcgt ggtgatggcc
     1081 agcgcgaacc agacagactt gccctggagc gcggggaaca ccgccgcggt gtagtctccc
     1141 atcgagaccg tcaccagcgc catcgcggcg cagctcgaaa gccagtcgct ccagccgacc
     1201 gcgaagccgg catactcgcc cagtgcccgc cgcacgaaga cgtactgtcc gcccgattcc
     1261 ggcaccatcg cgcccagctc cgccagcgag agcgcgccca gcagcgcata gacgccgccc
     1321 agcagccagg cgccgagaaa ccagcgggca tcgggaaggt ggccggcaac atcgccgggg
     1381 gttcgcagga tgccgacacc aatggtattg ccgatgatga cggcgagccc gaaggcgacg
     1441 cccaggatct gaaggagacg gccgcgctgg gcgggggcgg ttgccgggac ggccgtcact
     1501 cggacttgag cttcttcact tcggccgtga ggcggggaac gatctcgaac aggtcaccca
     1561 cgatgccgta gtcggccacc ttgaagatcg gggcgtcctt gtcgcgattg atggcgacga
     1621 tggtgcgggc ggtgcgcatc cccgccaggt gctgaatcgc gccggagatg ccgaccgcga
     1681 cgtagagccc ggggctcacc gtcttgccgg tctggcccac ctgggcgccg tgctcccgcc
     1741 agcccgcgtc gaccaccgcg cggctcgcgc cgaccgccgc attgccgaac gccgccgcca
     1801 ggtcttccag cagcttgaac tgttccggct ccttgagacc gcggccaccg gataccacca
     1861 ccggggcctc ggccacgtcg agcgccgcac tcgcgggcgc cttcacgcct gtgacccgcg
     1921 cgcgaatcgt gaaccccggg accgcggcgg cggccgccgt gcccgccctg gccgactcgg
     1981 tgggttgtac cgtgttggga cgaatcgaca gcagggccgg cgtgccttcg agccggagct
     2041 tctggagcgc cttgcccgca tacaccggac gggtgaccac gatctttccg ccctcggcgg
     2101 cgaactcggt cacatcggtg gcgagaccga ccccgatcct ggcggccacc cgcggcgcga
     2161 gatcccgccc ggtcgcggtc gcggcgaaca ccaccgcggt gtagcccttc gccacttcgg
     2221 cgatggtggc ggagtagccg tcgggctgat agagagagaa ctctccgtga gtcgcggcga
     2281 gcacccggtc ggcgccgtag cggcccagct ggtcggcacc ggtcacgctg ccggcgctca
     2341 gcaccagggc atcggcggtg gtgcccagct gatcggccag ccggcgggcc gcggtcagga
     2401 cctcgagcga gaccttccgg agggaaccgt cgcgctgctc ggtaatggcg aggataggca
     2461 tggtcagatt gccttcgctt cttcgcggag gaggcgcacc agctcgggta cggcgtccgc
     2521 gccttcgccc acgatgcggc ccgccttgcg ctcagccggc agactcagcc ccagcgacac
     2581 cagtgagccc gcgccgagcg agaccggctt cacctcgagc ggcttcttct tggccgccat
     2641 gatgcccttg agcgacggga gacgcggcgt attgagcccc ttgtcacagg tgagcacggc
     2701 ggggagcgca caggtcacgc tttcgatgcc accctcgatc tcgcggtcgg cggtgacggt
     2761 cccgccgctg atgccgagat gcgcgatcga ggtgatcgtc ggcagctcga gcagctcgcc
     2821 taccatcggc ccgacctgat ggttgtagtc atccaccgcg agcttgccga acaggatcag
     2881 gtcgtaccca ccagccttga gctccgcggc gagcgctttc gcggcctcga gaccatcggc
     2941 gggcgcctgg gcctggagca ggatggcgcg gtcggcgccc atcgcgagcg cggtgcgcag
     3001 cgtttcctgc gcggcatcgg tgccgaggga aagcaccacg acctcgccgg cgccggcagc
     3061 ttccttgagc ttgagcccct cttcgatggc gtactcgtcg tagggattgg ggacgaactt
     3121 cacaccattc tcgtcgatcg cctttccatc ggcgccaagg acgatcttgg tggtggtatc
     3181 ggggacccgc ttgaggcaga cggcgatctt catggcaccg ggggctgtgg tcgagcccgg
     3241 cacaggagag gccggccggg cggcgagtta agctagccgg gagtctgccg gtggtctacc
     3301 gggaggtctt cggtgggctg gcccccctca gtcgctgtcc ccgccgaagt tccggcgcac
     3361 caccagccgc accagccggc gctggccggg actcaggaag cgctccagtg cgtcacccgc
     3421 gccctggttc acgttgaagg tcccgaaggt ggcgtacttg tgctggaaga ggttgttggc
     3481 gatggcggtg atctcccatc cagcccctct ccaccccagc ctggcgtcgg ccacgaagta
     3541 gcccttgagc ttcggctcca cgttggcctc gtcgccccgg agatactggg gcccgatgta
     3601 gcggccatcc acgccggtga agaagccctt cgggaggacg aagctcccgc ccactttcac
     3661 ctgatgattc ggcaccagcg gcagctggtc gcccgggcgc accgcattgc tgccgccgaa
     3721 gtcctcccgg atcgagaaga tctcggccgc gctctggaag gtggcgaggg tataggcgta
     3781 attggcgtag agcgagtgtc ccccggtcac gaacgtctgg accgagaact cgaggccggt
     3841 gcggcgggtc cggtccagat tgccgaagaa gccttcgatg gtggagccgc tgatcgccgt
     3901 atcggaagca aagaggaaga tgtcgtcctt cacatcggtg cggtacgccg aggcggtgaa
     3961 gatcgaggtc cccgcgatga gcttgccgcc gatctcgtag gtcgtcgccc ggaccggctt
     4021 caccggcggg tcgtccccca gggcgaaggg gagcgggcag ggctcgttct cgtcggaaca
     4081 ggcgagttcg atgacggctg gagcccggaa gctggtcccc accgatccgt agagcgtgag
     4141 cgtctgggac gcggtccagc tgatgccgcc ccgcgggctc agccggctgt aggagctggt
     4201 ggtatcgcgg gagggatcga gctgattgcg gaagggaatc cgcacgtagt cgtagcgcgc
     4261 ccccgccgag agcgtgactg gcccggtggt gagatccgcg atgccgaagg cgccgacgtc
     4321 ccaggtgggg ctcttcacga acgtggtctg gagctggctg ccgccgaact tggtcgaatc
     4381 ggcgaagagc tgcacatcgg cgtggctggc cgatccatcg gcgccgatcc gcaggccgag
     4441 cttgctgcgg cccacggtcc ggtcgacccg gtagtcgacg ttgccaccca ggatccggtt
     4501 ccgtgacttg ccgagattgt ccgggtcggc cggctggttg acgttgaacc gctcggcccg
     4561 gtggcggcgg atgtaggccg aagcgctgag ctgggagtgc ggcgaacggg tgtagcccga
     4621 gaccgcgagc tggagattgt tgaggtcttc gaagtcgccg gtcgtgaggt tgctgtcggg
     4681 gttcgtctgg tagacgcttt cgggaaggga gccagccgcc tgggcgcggg agcgtgctcc
     4741 gtacccctgc agcctgaggc cccaccgctc ggtgagccgg ccgacgttga agaacccgtt
     4801 gtactgcttc gagaaagtgt cctgccgcca gccatcctcc cggtcgtagc cgccgccggc
     4861 gtagtagctc cacttgccgc caccgagcga accactgagc gaggcatcgg tgccgagcgt
     4921 cttgtagttg ccgcccgaga cttccagctc tccgcgggtg ggtccgccgc cctggttcga
     4981 gaccaggttg atggcgccac cgagcgagtt gcgtccgagg agtgaggcgg tgccggagag
     5041 gagctcgatc cgggtgagat gctccatggg gagaaggtcg aaattcacct gcgcggcgtc
     5101 gggctcattc tgccggatcc cgtcgaggaa gaccgagatc ccctgcggca gccccacgac
     5161 gggcgaggcg aagaatccgc gcgatgcgag cgacatcttg gcggcggcgc cgagatcgtc
     5221 gtagctcgag aagccggcct ggctcaccag gaggtcggtg aggagccgcg gttcgttcgc
     5281 ctcgatgtcg ccccggttga gcacggtgac gcgggccggc acgccggagc ccaccaccgg
     5341 tcccgcgctc ggcaggatgg agccgaccac ctcgatcggg gccagctcga cgacggtggt
     5401 atcgcgcttg gtgctgtcac gctgctgggc accgagcggg gaggccgcga gaatcagcgt
     5461 ggacgcgagc aggatgcgtt gcattcgaat tccggaataa ttggtgtcat tccgagccgc
     5521 gtgtgcggcg aggaatccct gttcgtcaga atgcagggat ccctcgcttc gctcgggatg
     5581 acagggtgac actcgaaaca ggcgggctta gcggagtttc gcctgggcgc ccggtgcggt
     5641 ccgctcgtag atcgcggcca tggtgatcag gtccggtgcc cgcccgacca ccaccagcgc
     5701 atcgtcgctg gggccgccgc catcgtagtc gaggcagcag aactcgcggg tctcccctcc
     5761 atccaccgga cccgcaaccg cgggggcgcc gccacggaga aagcggactg gatcgccagg
     5821 cgagtagcct ccactccggt ccacatcctc atagatccgg agatcctgca ccttcacgcc
     5881 ggcctggctc acgatgagca ccccatcgtc cgcggtgccg ccgccgtcca gatcctggca
     5941 gcagtggtcc accgccacca gacgctgcct ggaggtctgc cagcccgcga acgagaccag
     6001 tccgagcacc acggtggccg cagccgccag gatcgcaggg cggcgctgct gcggggcaaa
     6061 gcggcgcggt tcctcgcccc gggccgcccg tccccggatt tcagctccca gcgatgcccg
     6121 gggcgcaaag ccgatctcgc gaagctcgcg gtcgaggtcg tcctggccgg tcacgcctcc
     6181 tcctcgtcct ggtcgagcac ccgccggagc cgcgccagcg cccgccagag ccgggtccgt
     6241 actgccgact cacgaatgcc gagcacctcg gccacgtcgg cggtgtccat cccgctcccg
     6301 taacggaggc cgatgatctc ccggtcggct tcggcgagag tgctcaccgc atcgagcagc
     6361 cgcgctaccc gttcctccca gagcagccgt tcttcggccg aaggggcgtc gcataccagg
     6421 tcgcgcatcg agcccaatgg cacgtgccgg cgcacccggt ccttccgcag gtgatcgcgg
     6481 agggtgttct gcgcgatgcg gaagatccag gtctgcggct gggcccgggc cgggtcgtac
     6541 tggcccgccg cacggaagac cttgaggaag gtgtcggcgg tgacgtcttc ggctgcgtcg
     6601 gccgatggaa gatgaaagcg gacgtaggag tagacggccc gcccataggt gacataccaa
     6661 tctcccgcaa cgccctctcc accgcccggt gggtgacccg gcagggcggt cggggcgtgc
     6721 gggagattga ttgaaccggg ctgatcagcc ataggcgggg gattatacgc gcgacgggcc
     6781 cgtgcgtcac acgggccctt ccggggcgtc acaccggccg gatcaatctc cgactttgca
     6841 gcaccccttg gcgaggcagg tggtccaggg gagcacttcc tcggccatga ggtccgcccc
     6901 gcctgggcgg cttcgctcca ggatcccgcg gagctgccac tgcgcaatcg actggcgcca
     6961 ggcgcgggtc ggaggatgga tgacggtcgg gacgtcgaac cggtccaggt cgcggttggg
     7021 agactcggcg atgaacgcgc tgagccactg gtccttcttc ttgtagacca cccagtagct
     7081 ccggccgccg ggagcgaggg cgtacttccg aagcggcttc tgggagtgat tctgcaactc
     7141 tgccaccacc gagccgagcg cgagccgctc ctccgactgg cgataggtcc cttcctgcgg
     7201 ctcgatggtg acctcgatgt cgtcctccac gacggcccgg tccgaggcgc ccgggttggg
     7261 atcgtagctc tggcggcgcc cgatatcgag caccgactcc
//
LOCUS       DATIFF010000811         1368 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_870408, whole genome shotgun sequence.
ACCESSION   DATIFF010000811 DATIFF010000000
VERSION     DATIFF010000811.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1368
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_870408"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..822
                     /locus_tag="VLD58_11805"
     CDS             <1..822
                     /locus_tag="VLD58_11805"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB55037.1"
                     /translation="SILRLIPMPPACFGGGEIRFQDQDLLAFSSDEIRGIRGNRISMI
                     FQEPMTALNPVFTVGNQMMEVFRVHRRMGRADALGNAVEMLAKVGVPAPERRIREYPY
                     QLSGGLRQRVMIAMALACRPALLLADEPTTALDVSIQAQILELMTGLKAELNTAILLI
                     THDLGVVAEITRRVAVMYTGRIMEEAPTLNLFDTPLHPYTRGLLTSIPRADASFEIDS
                     LTEIKGVVPSAAALPPGCHFEPRCPLAMDICRTQAPALEEARPGHRVACWRAAHA"
     gene            815..>1368
                     /locus_tag="VLD58_11810"
     CDS             815..>1368
                     /locus_tag="VLD58_11810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/oligopeptide/nickel ABC transporter
                     ATP-binding protein"
                     /protein_id="HSB55038.1"
                     /translation="MPELLAVRNLVKHFPVRRGFLGRRAAVVHAVDDVSFSLEENETL
                     GLVGESGCGKTTAGFSILRLIEPTSGEVWFQGENILTLAPERMRRLRRHMQIVFQDPF
                     GSLNPRLTVERVIEEPLLNHEALSGAERRERVEEALVRVGLLPEHMTRFPHEFSGGQR
                     QRICVARALVLRPRLVIGDEPVSAL"
BASE COUNT          202 a          485 c          470 g          211 t
ORIGIN      
        1 tccatcctgc ggctgatccc gatgcccccg gcgtgtttcg ggggcgggga gatccgcttc
       61 caggaccaag acctcctcgc cttcagcagc gatgagatac gggggatccg cggcaaccgc
      121 atcagcatga tcttccagga gcccatgacg gccctcaacc cggtcttcac ggtcggcaac
      181 cagatgatgg aggtcttccg ggtgcaccgc cgcatggggc gggccgatgc gctggggaat
      241 gccgtcgaga tgctcgccaa ggtgggggtg cccgccccgg agcggcggat ccgggaatac
      301 ccgtatcagc tctccggcgg cctgcgtcag cgggtcatga tcgccatggc gctcgcctgc
      361 cggccggcgc tgctgctggc cgacgagccc accacggccc tggatgtcag catccaggcc
      421 cagatcctcg aactcatgac ggggttgaaa gcggagctga acaccgccat cctgctcatc
      481 acccacgacc tcggcgtggt ggccgagatc acccggcgcg tggccgtcat gtacaccggc
      541 aggatcatgg aggaggcgcc gacgctcaat ctcttcgaca ccccgctgca cccctacacc
      601 cgcgggctgc tgacctccat cccccgggcc gatgcctcct ttgaaatcga cagtttgacc
      661 gagatcaagg gggtcgtgcc cagcgcggcg gccctcccgc cgggctgcca cttcgagccc
      721 cgctgcccgt tggccatgga catctgccgg acccaggcgc ccgcgctgga ggaggcccgg
      781 cccggccacc gggtggcctg ctggagggcg gcccatgcct gagctgctcg cggtgcgaaa
      841 cctggtcaag cacttcccgg tgcggcgggg atttttgggc cggagggcgg ccgtcgtgca
      901 cgccgtggac gacgtctcct tcagcctcga ggaaaacgaa accctggggc tggtgggtga
      961 gtcgggctgc ggcaagacca ccgccgggtt cagcatcctg cgcctgatcg agcccacctc
     1021 gggcgaggtc tggttccaag gcgagaacat cctcaccctc gcgccggagc ggatgcgccg
     1081 cctgcgccgc cacatgcaga tcgtcttcca ggacccgttc ggctcgctca atccgcgcct
     1141 gaccgtggag cgggtcatcg aggagccgct gctcaaccac gaggcgctga gcggggcgga
     1201 gcgccgcgag cgggtggagg aggcgctcgt gcgggtgggc ctgctgccgg agcacatgac
     1261 gcgcttcccg cacgagttct ccggcgggca gcgccagcgc atctgcgtcg cccgggcgct
     1321 cgtgctgcgg ccccggctcg tgatcggcga cgagccggtc tcggccct
//
LOCUS       DATIFF010000812         5106 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_564303, whole genome shotgun sequence.
ACCESSION   DATIFF010000812 DATIFF010000000
VERSION     DATIFF010000812.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5106
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_564303"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(475..954)
                     /locus_tag="VLD58_11815"
     CDS             complement(475..954)
                     /locus_tag="VLD58_11815"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSB55039.1"
                     /translation="MTRPSQDTCLRCQTPLAEGARYCHLCGVSVSAAATGEYTRYDLG
                     RFFNYAVDMLCIAGIDGYFKLVNPAFERVLGYTAVELLRTPFVQLIHPEDRTDTVAEV
                     TKLANGLETICFRNRYRCKDGSYRRLEWTSYPEPSTGLLYAVARDVTERDRADRQTA"
     gene            1133..1663
                     /locus_tag="VLD58_11820"
     CDS             1133..1663
                     /locus_tag="VLD58_11820"
                     /inference="COORDINATES: protein motif:HMM:NF015862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HSB55040.1"
                     /translation="MLSPTRLAAPVFLILAAAGASDLAAQTSSKRVMSLSAAKRIAAA
                     AEAEATRRGATVVIVVVDDGGYPLVLERLDDTQVASVDVGIAKARTSAIFRRPSKVFE
                     DQVKNGRVAALALPGAVPLQGGLPLVFEGKVVGAIGVSGNTPQEDEEIARAGASVAEA
                     ALAGRLQEARRDGGRR"
     gene            complement(1885..2577)
                     /locus_tag="VLD58_11825"
     CDS             complement(1885..2577)
                     /locus_tag="VLD58_11825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55041.1"
                     /translation="MPGFRVASVQAVLAQRFPDAVSGRGWTRGIVPSGVAALDSVLPE
                     GGFQRGRIAVWSPGPGAAALLRAACLGTVSGGERAVWIDVGHTVAGACWCEGPLLIRP
                     DGPVAGLRAAEELARSGGFGLVVLDGVDPDTTAMVRVSRAAHEGGSALVLLTRTTSLA
                     SLRLASRPLPGEYVWRRSPLGEPAAVAAVRLRIEARASGWFASTELTIPVWHDDLRLS
                     LETGYPDRRGVS"
     gene            complement(2717..3748)
                     /locus_tag="VLD58_11830"
     CDS             complement(2717..3748)
                     /locus_tag="VLD58_11830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55042.1"
                     /translation="MPAPTMVRLCWAAAALAAGLGPTGTSGLRAQTSQITEWKVPWDQ
                     SRPRDPYLDRETRVWFVGQAGNYVAWLHPASGRFKRYELDPGTLPHNLIVDAKGFVWY
                     AGNGNGTIGRLDPATGRITRFSMPDPAARDPHTLVFDRSGDIWFTVQRSNFIGKLAVA
                     TGSVRLVPVPTAGALPYGLGVDPTGRPWFVEFGSNKLATVDPATFRITEYTLPRPRAR
                     PRRIAITSDGRVWYVDYVGGMLGRFDPATGKFSEWAMPAGGSAAPYAMAADDRDRVWF
                     VETGPQPNRLVGFDTRTEKFFGETPIAESGGITVRHMVYDPGTKALWFGTDANTIGRA
                     LVPEARLVP"
     gene            3831..4754
                     /locus_tag="VLD58_11835"
     CDS             3831..4754
                     /locus_tag="VLD58_11835"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB55043.1"
                     /translation="MAITLRPGRLDDSRAVFRVFRDAVIELGTRLGVTTITGGDDPAV
                     LADLWETRRSLFDHLARTGAHFWIAESGSEAIGYARSTLRDGVLELTELFVLPGTQSA
                     GVGRELLARAFPHAGERYRLVISTPDVRALTSYLKAGCYARFPIHHFARPARPDPPAS
                     DLETEPIDDSPRALELLAQIDQSVLGFRRDPDHAWLMSARHGVFYRREGRLVGYGYTG
                     PSRGPFADPDRGPFAAFGDVDLPAMLASAERSAQPGTVFGVDVPLVNRAVVDYVLAQG
                     FRMDPFATYLMSDAPFGRFDAYVSTPPSFFV"
     gene            complement(4751..>5106)
                     /locus_tag="VLD58_11840"
     CDS             complement(4751..>5106)
                     /locus_tag="VLD58_11840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55044.1"
                     /translation="NRMEGAHCYPPAAGDACSRAGLTLPVVDYDHGQGCSVTGGYVYR
                     GAVIPDLQGVYLYGDYCEGWVRSFRFAGGQATDERDWQVLRPGGNVTSFGEDAAGELY
                     ILTSQGGVYRVVTQP"
BASE COUNT          802 a         1773 c         1788 g          743 t
ORIGIN      
        1 ccccatctac gtgtgccgac catgtgccac ggcacgtggg gtgagcgagg cagacctgat
       61 cgccagcaat gcccagttca ccaacgcgca ggccatggcg gcggcaatgg cttgggccac
      121 gaaggtcttc gtggtctgaa cggatgatgt gcaggggcgc taggcggcga gcccagtcag
      181 gtgagagatc ccggcagacg ggcggggccg gcggcggcgt tccggcctag cggcaggacc
      241 gaactccatc gcatcgagcg cttcgcgctc ctcctccggc gcatcggccc agccgttgta
      301 atcacaagtg agcactgtac tcccccaaaa aggccgagct gccggcagtc gtcctgttag
      361 gaaaacgccg ctgggtggcg gcgcgttccc cactggcgcc tgacccacgc gcacgcaacc
      421 gtcgccgact ggggcccagg cctaccgccc agccgttgcc gcctgatcag gccgtcaggc
      481 cgtctggcga tccgcccggt cccgttcggt gacgtcacgg gccacggcgt agagcagccc
      541 ggtggacggc tccgggtacg atgtccactc cagccgccgg tagctgccgt ccttgcagcg
      601 gtagcgattc cggaaacaga tggtctcgag accgttggcg agcttggtca cctccgcgac
      661 tgtgtcggtc cggtcctcag gatggatcag ctggacgaag ggggtcctca gcaactcgac
      721 cgcggtgtag cccaagaccc gctcgaaggc gggattgacc agcttgaaat agccatcgat
      781 ccccgcgatg cagagcatgt ccacggcata gttgaagaac cgacccaggt cgtagcgggt
      841 gtattccccg gtggcggccg cgctcaccga gacgccgcag aggtggcagt agcgcgcgcc
      901 ctcagccagc ggcgtctgac accgcaggca ggtgtcttgg gaaggtctcg tcatgaccgc
      961 ccctccttcc gggtctccgg agaaccggat ggacaggagc ccagccggag ccgtgtaggt
     1021 tgcgtccgga atgagtgcat cctagcccgg tctggtgcgg gccgctgccc ccctcgaacc
     1081 ttgtgacgcc aacctgcgtt ctacctcgcg tgatcaccca cacgaggttc ctatgctaag
     1141 cccgacccgc ctggccgcgc cggtcttcct gatcctcgcc gccgccggag cgtccgacct
     1201 cgctgcccag accagctcga agcgcgtcat gtcgctgtcc gccgccaaga gaatcgccgc
     1261 cgccgccgag gcggaggcga ccagacgcgg cgccacggtg gtgatcgtgg tggtggatga
     1321 cggcggctac ccgctggtgc tggagcggct ggacgacacc caggtcgcga gcgtcgatgt
     1381 gggtatcgcg aaggcgcgta cgtccgcgat cttccgacgg cccagcaagg tgttcgagga
     1441 ccaggtaaag aacgggcgag tggctgctct ggcgttgccc ggagcggtgc cgcttcaagg
     1501 agggctgccg ctcgtgttcg aggggaaggt cgtcggcgcg atcggggtga gcggaaacac
     1561 cccccaggag gacgaggaga tcgcgagggc cggagcctcg gtggcggaag cagccctcgc
     1621 cggcaggctg caggaggcac gcagggacgg cgggcggcgc tgaaacaggt ccccgcgagt
     1681 gaccctatcc accgggcgat cgagcagctg gagcggggca tcgcgtgcgg ctggcgggac
     1741 acggcgatgc tggaccacga ctccgagttc cagcgatacc gggatgagcc ggcgatactg
     1801 gagcttcggg gccgggtcga cgcggctcac gagagtaccg gtgtcgccgg cgatcgcgag
     1861 tctggcgagc cggctcggca acggtcagga gacgccgcgc cggtcgggat agcccgtctc
     1921 gagcgacaga cgcaggtcat cgtgccagac ggggatggtg agctcggtgg aggcgaacca
     1981 ccccgacgcg cgcgcctcga tgcgcagcct cactgccgcc acggcggcgg gctcgccgag
     2041 cggactccgg cgccagacgt attcgccggg tagcgggcgg gaggcgagcc ggaggctcgc
     2101 gagcgaggtg gtgcgggtga ggagcaccag cgccgagccg ccctcgtgcg cggcgcggga
     2161 gacacgcacc atcgcggtgg tgtcggggtc cacgccgtcg aggacgacga ggccgaagcc
     2221 gcccgagcgg gcgagctcct ccgcggcgcg gagccctgct accggaccgt cggggcggat
     2281 gaggaggggg ccctcgcacc agcaggcgcc ggcgacggtg tggccgacgt cgatccagac
     2341 cgctcgctcg ccgcccgata ccgtcccgag acaggcggca cggagcagcg cggccgcgcc
     2401 cggccccgga ctccagaccg cgatccgtcc gcgctggaac cccccctcag gtaggacgga
     2461 atccagagcg gcgacccccg aggggacgat gccgcgagtc cagccgcgcc cggataccgc
     2521 gtccggaaat cgttgggcca gaacggcttg aacagaggcg acgcggaaac cgggcatatg
     2581 cttctggcgg cagggcaatg aaccagctga ataccgaaca aataccgaaa ataaatgata
     2641 tggtcggaag gaaacgaggg caagactggg aggcaggaag gaggcggcgg ggaccggagc
     2701 cccggcggcg cagtgctcag ggcaccaggc gcgcctcggg cacgagcgcc cggccgatcg
     2761 tgttcgcgtc ggtgccgaac cagagcgcct tcgtgcccgg atcgtacacc atgtggcgga
     2821 ccgtgatccc gccgctttcc gcgatcggcg tctccccgaa aaacttctcc gtcctggtat
     2881 cgaagccgac gagccggttg ggctgaggac cggtctcgac gaaccagacg cgatcccggt
     2941 cgtccgccgc catggcgtac ggcgccgcgc ttccgccggc cggcatggcc cactcggaga
     3001 acttgcccgt ggcgggatcg aagcggccca gcatcccgcc gacgtagtcc acataccaca
     3061 cgcgaccgtc cgaggtgatc gcgatccgcc gagggcgggc acggggccgc ggcagcgtgt
     3121 actcggtgat cctgaacgtc gccgggtcca ccgtcgcgag cttgttgctc ccgaactcga
     3181 cgaaccaggg ccggcccgtc gggtccaccc cgaggccgta ggggagcgcg cccgcggtcg
     3241 gcactgggac gagccgcacg ctccccgtgg cgacggccag cttcccgatg aagttcgagc
     3301 gctgaacggt gaaccagatg tcgccgctcc gatcgaagac gagcgtatgg gggtcgcgcg
     3361 cggccgggtc gggcatcgag aagcgggtga tcctgccggt ggcggggtcg agccggccga
     3421 tcgtgccgtt gccgttcccc gcgtaccaca cgaagccctt cgcgtccacg atgaggttgt
     3481 gcgggagcgt gcccgggtcc agctcgtagc gcttgaacct gccgctggcc ggatggagcc
     3541 aggcgacgta gttccccgcc tgccccacga accagaccct tgtctcgcga tcgagatagg
     3601 ggtcgcgcgg gcggctctgg tcccagggga ccttccattc cgtgatctgg gaggtctggg
     3661 cgcgaaggcc gctcgtgccc gtgggcccga ggcccgcggc aagggcggca gcggcccagc
     3721 agaggcgcac catcgttgga gccggcacat ttcctccctt ctcggtccgg gatcgatgcg
     3781 gcccgccgac ctgcggtagt ctatcttgcc agcatcccaa cccgtcaacc atggccatca
     3841 ccctccggcc tggccggctc gacgattccc gggcggtctt ccgcgtcttc cgcgatgcgg
     3901 tgatcgagct cggcacccgg ctcggcgtca ccacgatcac cggcggagac gacccggccg
     3961 tcctggccga tctctgggag acgcgccggt cgttgttcga tcatctcgcc cgcaccggtg
     4021 cgcatttctg gatcgcggag tcaggcagcg aagcgatcgg ttacgcgcgc tcgaccctcc
     4081 gcgacggcgt gctcgagctc accgagctct tcgtgctgcc tgggacccag tcggccgggg
     4141 tcggccggga gctcctggcc cgggcgttcc cccacgccgg ggagcggtac cggctggtca
     4201 tctcgacgcc ggacgttcgg gcgctcacca gctatctcaa ggccgggtgc tacgcccggt
     4261 tccccatcca ccacttcgcc cggccggcac ggccggatcc gcccgcgtcc gacctggaga
     4321 ccgagccgat cgacgactcg ccccgcgcgc tcgagctgct cgcgcaaatc gaccagagcg
     4381 tgctcggctt ccggcgcgat cccgaccacg cgtggctcat gagcgcccgg catggcgtct
     4441 tctatcgccg ggagggccgg cttgtcggct atggatacac gggcccgagc aggggcccct
     4501 tcgccgaccc ggaccgcggc cccttcgcgg ccttcggcga cgtggacctc cccgccatgc
     4561 tggcctcggc ggagcgatcg gcacagcccg gcactgtgtt cggagtggat gtccccctcg
     4621 tcaaccgggc cgtggtggac tacgtcctcg cccagggttt ccgcatggat ccgttcgcca
     4681 cctacctcat gagcgacgcg ccgttcggcc gcttcgacgc gtacgtctcc accccgccgt
     4741 cgttcttcgt ctagggctgg gtgaccaccc ggtagacgcc gccttgcgag gtgaggatgt
     4801 agagctctcc cgccgcatct tccccgaagc tggtcacgtt gccacccgga cgcaggacct
     4861 gccagtcccg ctcgtcggtc gcctgcccgc cggcgaaacg gaagctccgg acccagcctt
     4921 cgcagtagtc gccgtacagg tagacgccct ggagatcggg gatgaccgcc ccgcgataga
     4981 catagccgcc ggtgaccgag cagccctgac cgtgatcgta gtccaccacg gggagtgtga
     5041 gtccggcgcg actgcaggcg tcgcccgcgg caggcggata acaatgggcg ccctccatcc
     5101 gattcc
//
LOCUS       DATIFF010000813         8220 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1334007, whole genome shotgun sequence.
ACCESSION   DATIFF010000813 DATIFF010000000
VERSION     DATIFF010000813.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8220
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1334007"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..275
                     /locus_tag="VLD58_11845"
     CDS             <1..275
                     /locus_tag="VLD58_11845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55045.1"
                     /translation="VALKGVGPWSADIYLLMALGRPDVWPPGDIALLQAMQEVKRLRQ
                     RPTHERAHRIAATWAPWRSVAARILWHQYLSRRAERRAALVAAGGP"
     gene            371..880
                     /locus_tag="VLD58_11850"
     CDS             371..880
                     /locus_tag="VLD58_11850"
                     /inference="COORDINATES: protein motif:HMM:NF021425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2127 domain-containing protein"
                     /protein_id="HSB55046.1"
                     /translation="MPAESPTVPASPSRPKGATSLRVIGLFKLAQSLLIASLALAALH
                     LIRPTVAAKVREWVDDLPFDAQQDVTRQAASWLLGLPPSAAQVLVGGTLLYALLFAVE
                     GIGLLMKKRWAEWLTVVATASFVPIEFYEQIHRPGYVKAVIIVVNLAVVYFLARHLAS
                     RPAEATEQP"
     gene            877..1182
                     /locus_tag="VLD58_11855"
     CDS             877..1182
                     /locus_tag="VLD58_11855"
                     /inference="COORDINATES: protein motif:HMM:NF009508.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI-like protein"
                     /protein_id="HSB55047.1"
                     /translation="MKHYLLIYDVIPDYVARRAQFREVHLRLGWEAVEKGELVLGGAL
                     ADPVDGAVLLFQGDSPEVAEKFARADPYVREGLVTRWRVREWTTVVGPLAANPRPVS"
     gene            1179..1739
                     /locus_tag="VLD58_11860"
     CDS             1179..1739
                     /locus_tag="VLD58_11860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55048.1"
                     /translation="MTTPEEVIRRYREGTLSTEEAAAALLPLLMEAGSLDLPLTEEDM
                     PLLDALQRLSAPPLPPAQPLSWESQLWRALPKMADHFWPQIVEQQLDRSPQCFTYVFL
                     VGSEAAAEALRLQIGSSSDHAVTVQLPDDYARASGRLFGQAPPRMVVQDDLSHWSAWL
                     LSLTPVRDAALEKLYLSDPQETPEVP"
     gene            1736..2170
                     /locus_tag="VLD58_11865"
     CDS             1736..2170
                     /locus_tag="VLD58_11865"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HSB55049.1"
                     /translation="MSADILHDFPIAVPPSRVFDAITTPAGLDQWWTARSFGAPVPGS
                     EYQLWFGPEYDWRGVVSIARPNEAFELRLSKAMVDWLGTRVGFVLSPGGNGTQVRFYH
                     SGWNSVNEHFRISSFCWAMYLRILRRYLEFGEQVPYDERLIV"
     gene            2273..2839
                     /locus_tag="VLD58_11870"
     CDS             2273..2839
                     /locus_tag="VLD58_11870"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase (NAD(P)H) activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HSB55050.1"
                     /translation="MIRILAISGSLRAGSSNTEVLRALAALAPAGVQFDLYDGLAGLP
                     HFSPDLEQPELPPPVSALRRRVADADVLLISSPEYAHGVPGSLKNALDWLVSGFEFVA
                     LPVALVNPSPHSLYAQAALLETIRTMSAELVTPEAVTIPLTGRRLSSDAILAEPALAA
                     PLGALMQTLVAAAQASRAGGRRLRGPLG"
     gene            2853..3995
                     /locus_tag="VLD58_11875"
     CDS             2853..3995
                     /locus_tag="VLD58_11875"
                     /inference="COORDINATES: protein motif:HMM:NF013215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55051.1"
                     /translation="MTPTRGGRIYSGISLSSPAGPSTASSGAPTALSSRAAEHRAAAD
                     RAGLTYVTDGVAGIRRRRAGAGWIFFDPAGSRITDPAERKRLIGLVIPPAWTDVWICP
                     DPQGHIQVTARDARGRKQYRYHPAYRAARDTSKFRRILEFSELLPMIRERVERDLQAR
                     DLTRRQILATVVRLLDKTLIRVGNSEYARENRSFGLTTLRGHHVEVKGAAMRFTFRGK
                     SGVKHSVSLTDRRLARIIQQCQDLPGQELFQYLDSSGRRQTVSSGDVNEYLREITGRD
                     VTAKDFRTWAGTMLAARELRAVGPAATQKEAEKNIVRAIDTVAERLGNTRTVCRKYYV
                     HPTVLDAYLSGIIAPEAAPPEGRRERPTAALRREEIVILQFLQETA"
     gene            3992..4351
                     /locus_tag="VLD58_11880"
     CDS             3992..4351
                     /locus_tag="VLD58_11880"
                     /inference="COORDINATES: protein motif:HMM:NF005297.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor Sui1"
                     /protein_id="HSB55052.1"
                     /translation="MKKRGSGGLVYSTSHGRMCPECRRPAEECRCRKLQSAPAGNGVV
                     RVGRETKGRKGAGVTVITGVPLAADELAALAGQLKRLCGAGGTVHQGTIEIQGDHRDR
                     VIEALRRPGWTIKRVGG"
     gene            4354..4752
                     /locus_tag="VLD58_11885"
     CDS             4354..4752
                     /locus_tag="VLD58_11885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55053.1"
                     /translation="MSRSRFLLAAFLIPVVPLAAQTRPDSLLVYPGASVRIHAPSLGA
                     GVYLGRFATARVRGTTCYGAAVILPGSEGSPSLILLKGVSRLEVDRRTNFDYAVLGLE
                     PATEEDWLPIDLGQLRVQDSACAIKGKPAG"
     gene            4817..5311
                     /locus_tag="VLD58_11890"
     CDS             4817..5311
                     /locus_tag="VLD58_11890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55054.1"
                     /translation="MTDTPAGASRTAPLLLMIIGGAVLAYGQVILAPLAPSAAWTGVL
                     DSATPGPGPGRSFPLSDASRTVTLHLHGQASGRTFSVPTGATVAPQSLAGGDTVHVLV
                     GWGTLRDLPAAINLTAGSKTVVDSAIVLREQRTQGSRVSLAGGLLLAVGLGWMVRSRR
                     QANS"
     gene            5321..5704
                     /locus_tag="VLD58_11895"
     CDS             5321..5704
                     /locus_tag="VLD58_11895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55055.1"
                     /translation="MRRSLQLSVLLLLLQLGLGALLLTRGFPYFGSRLVDGASWWELP
                     VAIYHLPAIQALSAVGLCCGFGNGMVLPSRVIGGHIPMHLSGTLLLALTNWFCWSVVT
                     LLLYWLWWVRRAPAQPAPVADQAAE"
     gene            5701..6243
                     /locus_tag="VLD58_11900"
     CDS             5701..6243
                     /locus_tag="VLD58_11900"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF018525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSB55056.1"
                     /translation="MKPRLLLLPGLFDSGPEHWQSYWERSDPFSVRVRQRDWETPARS
                     EWVETLDQAVTRYGQDVVLAAHSTSCALVAFWAHATGRKVKGALLVGPSDTEGPNYPK
                     GPTGWAPMPLAPIPFPTIVVASTDDEYVSAERAAQFAKAWGSRLVMIGAAGHINSASG
                     LGDWPAGKDLVQDLLAARGS"
     gene            6297..6956
                     /gene="can"
                     /locus_tag="VLD58_11905"
     CDS             6297..6956
                     /gene="can"
                     /locus_tag="VLD58_11905"
                     /inference="COORDINATES: protein motif:HMM:NF007756.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004089 - carbonate dehydratase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0015976 - carbon utilization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbonate dehydratase"
                     /protein_id="HSB55057.1"
                     /translation="MPEIDELFAANREWAASITRQHPTFFDDLSRQQSPKYMWIGCSD
                     SRVPANQITGLLPGEMFVHRNVGNIVVHTDLNCLTVLQFAVDVLKVEHVIVCGHYGCS
                     GVAAAYQGRPLGLIDNWLRHIQDIAELHQDVLRSFADEPTRMDGLCALNALQQAANVC
                     RTTIVQDAWKRGQNLTVHGWVYRLQDGLIRDIGFGVRTPGEVEPAYRQALDRIASKAA
                     L"
     gene            7156..7521
                     /locus_tag="VLD58_11910"
     CDS             7156..7521
                     /locus_tag="VLD58_11910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55058.1"
                     /translation="MTATSQDTKRQRATSYTSKGKSTPVANSGSLSVVWESQFDQMCH
                     AVAADDLAIKNARRYRKLMDEIVESTGCTEEEVLAHGRKVRAVLYFAQDRLTREGALR
                     HLTGKARYEYRLPPVTHAF"
     gene            7600..8154
                     /locus_tag="VLD58_11915"
     CDS             7600..8154
                     /locus_tag="VLD58_11915"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HSB55059.1"
                     /translation="MFPWQLDPDTQLRPLSTADAGTFHALVVANRRHLDRFLRWSATV
                     KTLGDARTFLEGFTARLTAGDGWHLGIWVNGALAGGLVCWYINRYSRNAELGYWLAES
                     YVGRGLVTRAAARGIEHLFQIEGLHRIEMLCGVENHASRRVAERLGFQFEGIRRQSAW
                     ITDHFADHAVYGLLRPEWKPLPSP"
BASE COUNT         1225 a         2947 c         2692 g         1356 t
ORIGIN      
        1 tcgtcgcgct taagggggtg ggtccctgga gcgccgacat ctacctgctc atggcgctgg
       61 gccggcccga cgtctggccg ccaggcgata tcgcgctgct ccaggccatg caggaggtga
      121 agcggctccg gcaacggccc acccatgaac gggcccatcg cattgcggcg acctgggcgc
      181 cctggcggtc ggtggcggcg cggatcctct ggcaccagta cttgagccgt cgggccgaac
      241 ggagggcggc gttggtggcc gcgggagggc catgaccacg ggcgtgcgga ctggcggaac
      301 cttacgggcg gggagacaat tcctgctgag agaagcgcac agcccttacc cgatccgatc
      361 cctgcacatc gtgcctgccg agtccccgac cgtccccgca tcaccgagca ggccaaaggg
      421 ggcgacctcc ctccgcgtca tcggcctctt caagctggcg cagtcgctgc tcatcgcctc
      481 gctggcactg gccgcgctcc atctcatccg ccccacggtg gccgccaagg tgcgggaatg
      541 ggtcgacgat ctgcccttcg atgcgcagca ggatgtgacc cgccaggccg ccagctggct
      601 gctgggcctt cctcccagcg cggcgcaggt gctggtcggc ggcaccctgc tctatgccct
      661 gctgttcgcg gtggaaggga tcggcctgct gatgaagaag cgctgggccg agtggctgac
      721 ggtggtggcc accgcgtcct tcgtcccgat cgagttctac gaacagatcc accgcccggg
      781 ctatgtgaag gccgtcatca tcgtggtgaa tctggcggtg gtgtacttcc tcgcccggca
      841 cctggcgagc cggcccgccg aggccacgga gcagccgtga agcactacct gcttatctac
      901 gacgtaatcc cggattacgt cgcccgccgc gcccagttcc gcgaggtaca cttgcgtctg
      961 ggctgggaag cggtcgagaa gggcgagttg gtgctgggcg gcgcgctggc cgatccggtc
     1021 gacggagcgg tccttctctt tcagggcgat tcacccgaag tggcggagaa gttcgcccgt
     1081 gccgacccgt atgtccggga agggctggtg acccggtggc gcgtccggga gtggaccacg
     1141 gtggtcggcc cgctggccgc caatcccagg ccggtgtcat gaccacaccg gaagaggtaa
     1201 ttcggcgata ccgcgagggc accctctcga ccgaggaagc cgccgcggca ctcctgccat
     1261 tgctgatgga ggcggggagc ctcgatctgc ccctcaccga ggaggacatg ccgctcctcg
     1321 acgccctcca gcgcctctcc gcgccgcccc tcccaccggc ccagccgctc agctgggagt
     1381 cgcagctctg gcgggcgctg ccaaagatgg cggaccattt ctggcctcag atcgtagagc
     1441 agcaactcga ccgaagcccg cagtgcttca cctacgtctt cctggttgga tcggaggccg
     1501 cggccgaggc cctgcggctc cagatcgggt cgagcagcga ccatgcggtc acggtccagt
     1561 tgcccgacga ctacgcccgg gcgagtggcc gtctcttcgg gcaggcgccg ccccggatgg
     1621 tcgtgcagga cgatctcagc cactggagcg cgtggctcct gtcgctcacc cccgttcggg
     1681 acgccgctct cgagaagctg tacctcagcg atccgcaaga gaccccggag gtcccgtgag
     1741 cgccgacatc ctgcacgact tccccatcgc ggtcccaccc tcccgggtgt tcgacgccat
     1801 caccaccccc gccggactcg accagtggtg gacggcccgc tccttcggcg ccccggtgcc
     1861 ggggtcggag taccagctct ggttcggccc ggagtacgac tggcgcgggg tggtttcgat
     1921 cgcccgcccc aacgaggcct tcgagctgcg gctcagcaag gcgatggtcg actggctcgg
     1981 cacccgggta ggcttcgtgc tctcgccggg cggcaatggc acccaggtgc ggttctacca
     2041 ctccgggtgg aacagcgtca acgagcactt ccggatcagc tccttctgct gggcgatgta
     2101 cctccggata ctccggcgtt atctcgaatt cggcgaacag gtgccctacg acgaacgcct
     2161 gatcgtctga caactcccgg agagatccag ccatgccaca tctcaccctg cttgccgcct
     2221 cacttggtgg tacccagctg gcgcgcttca cggcttcccc cgtcggtgcc gattgatccg
     2281 catcctcgcg atctcgggga gtctccgcgc cggctcgtcc aacaccgagg tcctgcgcgc
     2341 gctcgcagcg ctggcgccgg cgggagtcca gttcgacctg tacgacggtc tcgcggggct
     2401 gccgcatttc tccccggacc tcgaacagcc cgagctgcca cccccggtga gcgcgctgcg
     2461 ccgccgggtc gcggatgccg atgtcctgct catctcgagc ccggagtacg cccacggcgt
     2521 gcccggttcg ctcaagaatg cgctcgactg gctggtgagc gggttcgagt tcgtagcact
     2581 cccggtcgcg ctggtgaatc cctcgccgca ctcactctac gcccaggcgg ccctcctcga
     2641 gacgatcagg accatgtcgg cggagctggt gacacccgag gcggtcacca ttccgctcac
     2701 cggccggcgc ctctcgtccg acgcgattct cgccgagccg gcgctcgccg ccccgctcgg
     2761 cgcgctgatg cagacgctcg tggccgccgc ccaggccagt cgtgccggag gccgccggct
     2821 ccgcgggccg ctcggctgat cgcgccatac gcttgacccc gacccggggc gggcggatat
     2881 actccggcat cagcctctct tctcctgcgg gtccctcgac cgcctcttct ggagccccta
     2941 cggcgctttc gtcccgtgcc gcggagcacc gcgctgccgc tgatcgtgcc gggctgacct
     3001 acgtcaccga cggggttgcc ggcatccgtc gccgccgcgc cggcgcaggc tggatcttct
     3061 tcgaccccgc cggcagccgc atcaccgacc ccgccgagcg gaaacggctc atcgggctgg
     3121 tgattcctcc cgcctggacc gacgtgtgga tctgccccga cccacaggga cacatccagg
     3181 tcaccgcccg cgatgcgcgg ggccggaagc agtaccgcta tcaccccgcc taccgcgctg
     3241 cccgggacac ctcgaagttc cgccggattc tcgaattcag cgagttactc ccgatgatcc
     3301 gcgagcgggt ggagcgcgac ctccaggccc gcgacctcac ccggcggcag atcctcgcga
     3361 ccgtggtgcg gctcctcgac aagaccctca tccgggtggg gaacagcgag tacgcccggg
     3421 agaaccgctc gttcgggctc accaccctcc ggggccatca cgtcgaggtg aaaggcgccg
     3481 cgatgcggtt caccttccgc ggcaagagcg gggtgaagca ctcggtctcg ctcaccgacc
     3541 ggcgcctggc gcggatcatt cagcagtgcc aggacctgcc cggccaggag ctgttccagt
     3601 atctcgattc gagcggccgc cggcagacgg tctcctccgg cgacgtgaac gagtatctcc
     3661 gcgagatcac cggccgggat gtgaccgcca aggacttccg gacctgggcc ggcaccatgc
     3721 tcgccgcgcg cgagctccgc gccgtgggcc ccgccgccac ccagaaggag gccgagaaga
     3781 acatcgtgcg ggccatcgat accgtggccg agcggctggg gaacacccgc accgtgtgcc
     3841 gcaaatatta cgtgcacccc acggtgctcg atgcctatct ctccggcatc attgcccccg
     3901 aggcggcgcc gcccgagggc cgtcgcgagc ggcccaccgc cgcgctccgc cgcgaggaga
     3961 tcgtcatcct ccagttcctc caggagacgg cgtgaagaag cgcgggagcg gtgggctggt
     4021 gtattccacc agccatggcc ggatgtgccc cgagtgccgc cgccctgccg aggagtgccg
     4081 ctgccgcaag ctccagtcgg ccccggctgg caatggcgtg gtgcgggtcg ggcgggaaac
     4141 caagggccgc aaaggcgccg gggtcaccgt catcacaggg gtgccgctgg cggcggacga
     4201 actcgccgcc ctcgccggcc agctcaagcg gctctgcggc gccggcggca cggtgcacca
     4261 gggcaccatc gagatccagg gcgatcatcg cgaccgggtg atcgaagcgc tccgccgccc
     4321 gggatggacc atcaagcggg tgggaggctg atcgtgtcgc gaagccggtt tctcctcgca
     4381 gcattcctga taccggtagt gccgctcgcc gcgcagacca ggccggattc gctgctggtc
     4441 tatcccggcg cctccgtgcg gatccacgct ccctccctcg gcgccggcgt ctatctcggc
     4501 aggttcgcca cggccagggt ccgcggcact acatgctatg gcgcggcggt gatactgccc
     4561 ggctcggagg gatcgccctc gctgatcctg ctcaagggtg tgagccggct cgaggtggat
     4621 cgccgcacca atttcgacta cgccgtcctc gggctcgagc cggccaccga ggaggactgg
     4681 ctgccgatcg acctggggca gctccgggtc caggacagcg cctgtgccat caaggggaag
     4741 cccgccgggt gagcattgcc gcgggtgtct gcatgtcggt accttgcgcc cctgacaccc
     4801 acaccagtca ggtccgatga cagacactcc cgccggagct tcccgcaccg caccgctcct
     4861 cctgatgatc atcggcggcg ccgtgctggc ctacggccag gtgatcctcg cgccgctggc
     4921 cccatccgcg gcgtggaccg gagtcctcga ctccgccacg ccgggccccg gcccgggacg
     4981 gagctttccg ctgagtgacg ccagccgcac cgtcacgctc catctgcacg ggcaggcgag
     5041 cggccggacc ttctcggtcc ccaccggcgc caccgtggcg ccccagtcgc tcgcaggcgg
     5101 cgataccgtc cacgtgctgg tgggctgggg cacgctccgt gacctgcccg ccgcgatcaa
     5161 tctcaccgcc ggcagcaaga ccgtcgtcga ctcggcgatc gtgctgcgcg aacagcgcac
     5221 ccagggcagc cgggtctcgc tggccggagg gctcctcctg gcggtggggc tcgggtggat
     5281 ggtccggagc cgccgccagg cgaacagctg agagcatatc gtgaggcggt cgctccagct
     5341 ttcggttctg ctcctgttgc tgcagctcgg tctcggcgcc ctgctcctca cccgcggctt
     5401 cccctacttc ggctcccggc tcgtggatgg ggcgtcgtgg tgggaactgc cggtcgccat
     5461 ctaccatctc cccgcgatcc aggcgctctc cgccgtcggc ctctgctgcg gcttcggcaa
     5521 cggcatggtg ctcccatccc gggtcatcgg cggccacatc ccgatgcacc tgagcggcac
     5581 gctgctcctg gcgctcacca actggttctg ctggagcgtg gtgacccttc tcctgtactg
     5641 gctctggtgg gtgcgccggg ccccggcgca acccgctccg gttgccgatc aggcagctga
     5701 atgaagcccc gcctccttct ccttccgggt ctcttcgatt cggggcccga acactggcag
     5761 agctactggg agcgctccga tcctttctcg gtgcgggtgc ggcagcgcga ctgggagacc
     5821 cctgcacgct cggaatgggt ggaaaccctg gatcaggccg tgacccgcta cggccaggac
     5881 gtggtgctcg cggcccacag cacctcatgc gccctcgtgg cgttctgggc ccacgcaacc
     5941 gggcgcaagg tgaagggcgc cctgctcgtg ggcccgagtg ataccgaggg gccgaactat
     6001 cccaagggac ccaccgggtg ggctcccatg ccgctcgcac cgattccctt ccccaccatc
     6061 gtggtcgcca gcaccgacga cgaatacgtc tctgccgagc gtgcggccca gtttgccaag
     6121 gcgtggggca gccggctggt aatgatcggg gcagccggtc atatcaactc ggccagtggc
     6181 ctcggtgact ggccggccgg caaagacctt gtacaagacc tgcttgccgc gcggggcagt
     6241 tgacggaggg ccgggccgtt gccactgttc cgcccgtcac cagccccagg gggaacatgc
     6301 ccgagatcga tgaactgttc gccgccaacc gggaatgggc ggcgtccatc acccgccagc
     6361 accccacatt cttcgacgat ctatcccggc agcagagccc caaatacatg tggatcggct
     6421 gctcggacag ccgggtcccg gccaaccaga tcaccggcct tctcccgggc gagatgttcg
     6481 tccaccggaa tgtcggcaac atcgtggtgc acaccgacct caactgcctc accgtgctcc
     6541 agttcgcggt cgacgtgctc aaggtcgagc atgtgatcgt gtgcggccac tacggatgca
     6601 gtggtgttgc cgcggcctac cagggccggc cccttggcct catcgacaac tggctgcggc
     6661 acattcagga catcgcagaa ctccaccagg acgtcctccg gagctttgcc gatgaaccca
     6721 cccggatgga cggcctctgc gcgctgaatg cgctccagca ggctgccaac gtctgccgga
     6781 ccacgatcgt ccaggacgcc tggaaacggg gccagaacct gacggtccat ggatgggtgt
     6841 accggcttca ggatggcctc atccgggaca tcgggttcgg ggtccggact ccgggcgagg
     6901 tcgagccggc ctaccggcag gcgctggacc ggatcgcttc caaggcagcc ctgtagccag
     6961 tgtccggaca ttgagttaag ttattgtcct gcaattgatt acgatataaa tcgtgggccg
     7021 gagtcaggtc gggagaggcc gtcgcctctg cagagtggac tcgaggaggc tatctttatg
     7081 cttcgtcgga gtctcccgtt ccctgtcttg tccggcccgc catgtctctg ggggccggtt
     7141 ttcgaggaag ccgtaatgac cgctaccagc caggacacca agcgccagcg cgccacttcc
     7201 tacaccagca agggcaagag cacgccggtc gccaattcgg gctccctgtc ggtggtgtgg
     7261 gagagccagt tcgaccagat gtgccacgcg gtggccgcag acgatctcgc catcaagaat
     7321 gcgcgccgct accgcaagtt gatggatgag atcgtggagt ctaccggctg caccgaggaa
     7381 gaggtcctgg cccacggccg gaaggtccgg gcggtgctgt acttcgcgca ggaccggctg
     7441 acccgtgagg gcgccctgcg ccacctcacc ggcaaggccc ggtatgagta ccgtctgcca
     7501 ccggtgacgc acgcattctg agccccgttg ctgacgtccc ccgacccgcc ggcccacgcc
     7561 ggcgggtttt tcataggtag tcaccccgcc agaggcccca tgtttccctg gcagctcgac
     7621 cccgacaccc agctccgccc gctctccacc gccgacgccg ggacctttca cgcgctggta
     7681 gtggccaacc ggcgccacct cgatcgtttt cttcgctgga gcgccaccgt caagacgctc
     7741 ggcgatgcgc gcacttttct cgagggcttc accgcgcggc tcacagcggg cgacggctgg
     7801 catctcggta tctgggtgaa cggcgcgctg gcgggagggc tggtctgctg gtacatcaat
     7861 cgctacagtc ggaacgccga gctgggctac tggctggccg agtcgtacgt gggacgggga
     7921 ctcgtgaccc gggcggcggc ccgcgggatc gagcacctct tccagatcga ggggctccac
     7981 cggatcgaga tgctctgcgg ggtggagaac cacgcaagcc gccgggtcgc ggagcggctc
     8041 ggcttccagt tcgaagggat ccggcgccag tcggcctgga tcaccgatca ctttgccgac
     8101 cacgcggtct acggtctgct ccggcccgag tggaagccac tccccagccc ctgagcccat
     8161 gccccgcgtc ctgatccgca actttgtggt gccggccgac gtcatcgacg tcaacgggca
//
LOCUS       DATIFF010000814         1015 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_409752, whole genome shotgun sequence.
ACCESSION   DATIFF010000814 DATIFF010000000
VERSION     DATIFF010000814.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_409752"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..229)
                     /locus_tag="VLD58_11920"
     CDS             complement(<1..229)
                     /locus_tag="VLD58_11920"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB55060.1"
                     /translation="MKLTVLVPTYRRPADLSRCLKALEEQRRQPDQVVVIARGDDYDT
                     RSLLAARRPDPLSLQVVPTELPGQVAALNTGL"
     gene            complement(226..>1015)
                     /locus_tag="VLD58_11925"
     CDS             complement(226..>1015)
                     /locus_tag="VLD58_11925"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HSB55061.1"
                     /translation="FPYEVRVFSLVNAPLPFATILVAGLFLQLAGRGIKRAIPLALGV
                     GALLLSLVRSVWLAGLVGLMVYLLALPRRTLRPMVLSALLAVGFVVIAPVFLPEEMAG
                     PTVKIVHDRLLTFTDLRHDVSYKDRASFLQNVSETVLREPFGHGLGSTGVSSTLSSTG
                     GDSIRDFDNGVFAVLYSLGWVAGAVFLSAVLCTVLLGLPRRERNDDYTAKAARAVGVT
                     SLFLAFGGNVFEGVSAACLWGFAGLLVAAHQWQAANHDPEEVRA"
BASE COUNT          185 a          359 c          347 g          124 t
ORIGIN      
        1 gaaggccggt gttgagggcg gccacctgcc ccggcagctc cgtcggcacc acctggagcg
       61 acagcggatc gggccgccgc gcggccagga gactccgggt gtcgtagtcg tccccccggg
      121 cgatcaccac cacctggtcg ggttgccgcc gctgctcctc gagcgccttg aggcagcgcg
      181 acaggtccgc cgggcggcgg taggtcggca ccagtaccgt cagcttcacg cgcggacctc
      241 ctccggatcg tggttggccg cctgccattg atgcgccgcc accaagaggc ccgcgaaccc
      301 ccagaggcag gcggccgaga cgccctcgaa gacattcccg ccgaacgcga ggaagaggct
      361 ggtgaccccg accgcccggg ccgccttggc ggtgtagtca tcgttccgtt cccgccgcgg
      421 caggccgagc aggacggtac agagcacggc ggagaggaag accgctcccg ccacccagcc
      481 cagcgagtag agcaccgcga acaccccgtt gtcgaagtca cgaatcgagt cgccacccgt
      541 cgagctcagg gtcgagctca ccccggtcga gccgagtcca tggccgaacg gctcgcgcag
      601 caccgtctcg ctcacgttct ggaggaagct ggcccggtcc ttgtagctca cgtcatgcct
      661 gaggtcagtg aaggtgagga gccggtcatg cacgatcttc accgtcggtc cggccatctc
      721 ttccggcagg aagacgggtg cgatcaccac gaagccaacc gcgagcagcg ccgagagcac
      781 catgggacgc agggtgcgcc gcggcagcgc gaggaggtag accatcaggc caactagccc
      841 ggcgagccat accgagcgca ccaggctgag gagcagggcg ccgacaccga gtgccagcgg
      901 gatcgcccgc ttgatgcccc gccccgccag ctggaggaag agccccgcga ccaggatggt
      961 cgcgaagggg agcggcgcgt tcaccaggct gaagacccgc acctcataag gaaag
//
LOCUS       DATIFF010000815         1013 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1794883, whole genome shotgun sequence.
ACCESSION   DATIFF010000815 DATIFF010000000
VERSION     DATIFF010000815.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1794883"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..686)
                     /locus_tag="VLD58_11930"
     CDS             complement(<1..686)
                     /locus_tag="VLD58_11930"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helical backbone metal receptor"
                     /protein_id="HSB55062.1"
                     /translation="MRFRLPGAMLALALPACGGHAAPSSGTSLDDVGHRIALTRPARR
                     IVSLSPSTTELLFAIGAGPALVGRTRWCDYPPEAASVPSVGDGLDPNVELVVSRRPDL
                     VVLYASTGNQGIIARLDALGIASASLKLDRLDDLPRAARLLGRLAGMAPRADSLAAWY
                     QARLDSARSAGAAPERRVALVVWDNPPIVIGAGSFLTEVVALAGARNVFDDVAQPSAP
                     TGIETITARDP"
     regulatory      complement(783..893)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
BASE COUNT          164 a          355 c          358 g          136 t
ORIGIN      
        1 ggatcccgag ccgtgatggt ctcgatcccg gtgggcgccg agggctgcgc cacgtcgtcg
       61 aacacgttcc gggcgccggc cagtgccacg acctcggtga ggaagctgcc cgccccgatc
      121 acgatgggcg gattgtccca caccaccagg gccactcgcc gctccggcgc ggcgcccgcc
      181 gagcgagccg agtcgagccg cgcctgatac caggcggcga gcgaatccgc tcgcggtgcc
      241 atcccggcga ggcgccccag cagacgggcg gcccggggga gatcgtccag ccggtcgagc
      301 ttgagggagg ccgacgcgat gcccagcgca tcgaggcggg caatgatgcc ctggttgccg
      361 gtggacgcgt acagcaccac cagatcgggc cggcggctca ccaccagctc cacgttggga
      421 tcgagaccgt cgcccacgct ggggaccgag gccgcctcgg gcgggtagtc gcaccaccgg
      481 gtgcggccca ccagggcggg ccccgcgccg atcgcgaaca gcagctcggt ggtggagggg
      541 gaaagagaga cgatgcgcct ggctggccga gtcagcgcga tgcggtggcc cacgtcgtcc
      601 agcgaggttc cgctggaagg agcggcgtgg cccccgcagg cgggcagggc cagggccagc
      661 atcgcgcccg gcagcctgaa acgcaaaacg ctcactcctt tcccacggga aaggggtgag
      721 cggcagacag cgcgcccacc atccctcccg cgagggatca ccacggtggc gcgaacggga
      781 acgtctcctg gcttcgggct atcggctccc cttcccggtt tcccagtggg atcgagccga
      841 cggactgctg cccgttacag tggcggggcc gcgccggaat tgcaccggct tccggactcc
      901 gcgttcgcta gaatcgattg ctacaatacg accgagcagc ctctgggtca actcgccgag
      961 tcagaaatgg ttttctctgc ggactctgcg ccctctgcgg tgaaatctcc cga
//
LOCUS       DATIFF010000816         4899 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2103397, whole genome shotgun sequence.
ACCESSION   DATIFF010000816 DATIFF010000000
VERSION     DATIFF010000816.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4899
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2103397"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1075
                     /gene="purD"
                     /locus_tag="VLD58_11935"
     CDS             <1..1075
                     /gene="purD"
                     /locus_tag="VLD58_11935"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR00877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HSB55063.1"
                     /translation="EAPLAMGLADRLRAEGRAVFGPSRAAAEIEASKAFAKEVMASAG
                     VPTAASRAFTDLAAALKYVDAHAEPLVVKASGLAAGKGAVVCETRAEARETLRQMLGE
                     KKFGEAGSVVVIEEFMPGEELSVLAISNGREVELLPAAQDHKRLGEGDTGPNTGGMGA
                     YSPVALGTPALLERVRNEVLYPTLREMEKRGARYNGVLYAGLMIGPDGVPRVVEFNCR
                     LGDPETQVVVPLVEGGLTDCFYRVARGESPGALAVSRSSAVTTVLAARGYPDHPEKGA
                     AITLPDTLPRGVTIFHAGTTRDDTGVLRVSGGRVLNVTAVAPQFTEAQGMSRAAAESV
                     QYAGRIFRGDIGWREAKRQGAGV"
     gene            1189..1587
                     /locus_tag="VLD58_11940"
     CDS             1189..1587
                     /locus_tag="VLD58_11940"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HSB55064.1"
                     /translation="MLSRPTGVLVLTLSLAGLACSSSTDYGSGGGGSNPPPPSDVAIV
                     SGAEFKTNTAFNPNPFTAALNGGASVTVKWGNGDGTTHKLLANGASPAFSSGNIAPGQ
                     TFSATFTAAGTYAYHCTIHPNMVGSIVVNP"
     gene            1918..2547
                     /locus_tag="VLD58_11945"
     CDS             1918..2547
                     /locus_tag="VLD58_11945"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSB55065.1"
                     /translation="MSDTTPTQIEFENLLTPVLPAAYRAALHFTRSPADAEDAVQQAS
                     LQAWRAFRTFTGGTNFRAWFLCIVTNVCRSEFRRQSRTPLALAFDDPGTEGLPLSDVL
                     ADETELSPEGAVISQLDAAEIQAALLGLPEEYRTVATLYFVDDLSYQEIAAAVQCPIG
                     TVRSRLHRGRKMLMRQLWALAEERGIVAAQAEEVEDFSEYFAEETLRVA"
     gene            complement(2552..>4899)
                     /locus_tag="VLD58_11950"
     CDS             complement(2552..>4899)
                     /locus_tag="VLD58_11950"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB55066.1"
                     /translation="VMPYVEGESLRVRLVREGRLPPGEVIRLMADVTDALAYAHGKGI
                     IHRDIKPDNILLAGRHALVTDFGVAKAVSAATLAQRDLTIGVALGTPAYMAPEQATAS
                     PNLDQRVDVYALGVVAYELLTGHPPFDRSTAQAILTAHVMDRPVPLAQHRPDISPTLA
                     AIVDRCLAKHPEDRWQSAEQLLRQLEPLATPSGGTTPAAVMPVARRIRPNRWVLGGVA
                     AAFLLAAGYFVARPRPVLLGMSGAQRQITFTGQVSGAALSPDGELLAFVADSAGQSRL
                     MLQDLRGGQAIQLSTSLRFDYPSWSGDGSEIRCFTFDGPRGVLRRVPRLGGPARDMPV
                     PFWSALSPAGDRLAFLPQGGSALVIRNLATGDSAMTPLSPGWWHSIPTWSLDGERIAW
                     ASTPQSGSGLNRIWTMIVRQMKPVVVVEDSVMMGAPGWSGDGSALYFLRGRERVVDLM
                     RLPLDRQGKAAAPPELIRAGLTAGLPQTYIAFQPPPSVSADGKQLVYTQRQEWSNVGV
                     VDLGGGGATRPPRALTTGSASWEGARLSPDQKSVAAERTETDGLSLQVLSLSGGETKE
                     VGRLIEPGGLSWSPRGDALVVAAIERGSGRGLRFFPLNGAQSRAVAPGAVGDTPEWIS
                     DTLLVVPRVGNRTLISVDPKSGKVSPLANMDTTGWMFFPRRSPDGRRIAVAWNKGKGD
                     QRVYVFGPNDSAGTPIGTGLFNPASWSADGRTVYLVSGGFLADSSRIVAATADGRGQR
                     LLAVFPYSLEPVDVSADGRRAILIMHEQRADAWSIRFGPKR"
BASE COUNT          802 a         1712 c         1646 g          739 t
ORIGIN      
        1 ggaggctccg ctcgccatgg ggttggccga ccggctccgg gccgaagggc gtgcggtctt
       61 cgggccgagc cgcgccgccg ccgaaatcga ggcctccaag gcctttgcca aggaagtgat
      121 ggccagtgcc ggcgtgccca ccgcggccag ccgcgccttc accgacctcg ccgccgccct
      181 caagtacgtc gatgcccacg ccgagccgct ggtggtgaag gcctcgggcc tcgcggcggg
      241 caagggcgca gtggtctgtg agacccgcgc tgaggcgcgc gaaaccctcc gacagatgct
      301 gggcgagaag aagttcggcg aggccggcag tgtggtcgtc atcgaggagt tcatgccggg
      361 cgaggagctc tcggtcctcg ccatcagcaa cgggcgggag gtcgaactgc ttcccgcggc
      421 ccaggaccac aagcggctgg gcgaaggcga caccggcccc aacaccggcg gcatgggcgc
      481 ctacagtccg gtggcgctcg gcaccccggc gctgctggag cgggtccgga acgaggtgct
      541 gtatcccaca ctcagagaga tggagaagcg gggggctcga tacaacggag tgctgtatgc
      601 ggggctgatg atcgggccgg atggggtgcc gcgggtggtc gagttcaact gccggctggg
      661 cgaccccgag acccaggtgg tggtgccgct ggtcgaggga gggctcactg actgctttta
      721 ccgggttgcc cggggagaat cgccgggagc cctcgcggtt tcgcgctcga gtgcggtgac
      781 tacggtactc gcggcccgtg gttatccgga tcaccccgag aagggggcgg cgatcaccct
      841 gcctgacacg ctgcccagag gcgtgacgat ctttcacgcc gggacgactc gcgatgatac
      901 aggtgtgttg cgggtgagtg gcggacgcgt cctcaacgtc accgcggtcg cgccgcagtt
      961 caccgaagcg cagggaatga gccgggccgc cgcggagtca gtacagtacg ccggccgcat
     1021 tttccgcgga gacatcggct ggcgtgaggc aaagcggcag ggcgcggggg tgtgatcgac
     1081 gaccttccgc gctgagaccc gcctgcctca ctctgtagcg tccccgcctg acccgtcgcc
     1141 gggcccgacc acacatcacc cgcagcgcgc tcccgaagga gtggtctcat gctctcccgc
     1201 cccaccggag ttctggttct caccttgtct cttgcaggtc tcgcctgttc ctccagcacc
     1261 gactatggat cgggtggcgg tggctcgaat ccgccgccgc cttctgacgt cgccatcgtg
     1321 agcggagccg agttcaagac caataccgct ttcaacccca acccgttcac cgctgcgctc
     1381 aatggcggcg cctcggtcac ggtgaaatgg ggcaacgggg acgggaccac ccacaagctc
     1441 ctggccaacg gtgcgagccc tgccttctcc agtggcaaca tcgcgccggg ccagacgttc
     1501 tccgccacat tcacggcggc agggacctac gcctaccact gcaccattca cccgaacatg
     1561 gttggcagca tagtggtgaa cccataggaa cgaagtcgaa gggcgcagat gaggccgttc
     1621 tccgcggccc tctgcgcctc cgcgcctccg cggtggaccg cgcccaaacc aggtcccgat
     1681 cccaacgccc cgttcccaac agattgggaa tcctcacaag ggattgggac cgctcgcgaa
     1741 ctccgtgagg catgggaccg gactcacacc gcctcgtaag ccaatattcg acaagaactt
     1801 gaagcaccac tgccagctca cgaaacgagt tggcaccgca tctgccttac cagtggccag
     1861 cggcgatcgg cgccgaacga gtccacggac ggatgaccac tggcgaggaa ggctgacatg
     1921 tcggacacca cccccaccca gatcgagttc gagaacctgc tgaccccggt cctgcccgcg
     1981 gcctatcgcg cggcgctcca tttcacccgg agcccggccg acgccgagga tgcggtgcag
     2041 caggcctccc tccaggcgtg gcgcgcgttc cggaccttca ccggtggaac caacttccgg
     2101 gcctggttcc tctgcatcgt caccaacgtc tgccgctccg agttccgccg gcagtcacgc
     2161 accccgctgg cccttgcctt tgacgatccc ggcaccgagg gcctgccgct ctccgatgtg
     2221 ctggccgacg aaaccgagct ctcccccgag ggcgccgtga tcagccagct tgacgccgcc
     2281 gagatccagg ccgcgctcct gggcctcccc gaggagtacc gcaccgtcgc gaccctctac
     2341 ttcgtcgacg acctctccta ccaggagatt gccgccgcgg tgcagtgccc catcggcacg
     2401 gtacgctccc ggctccatcg cggccgcaag atgctgatgc ggcagctctg ggccctggcg
     2461 gaagagcggg gaatcgtggc ggcgcaggcg gaagaggtcg aggacttcag cgagtacttc
     2521 gccgaagaga ccctgcgggt ggcgtgaaga gtcagcgttt cgggccgaag cggatgctcc
     2581 acgcgtcggc ccgctgttcg tgcatgatga ggatggcgcg ccttccatcg gcgctgacat
     2641 cgaccggttc gaggctgtag ggaaataccg cgagcagccg ttggcccctg ccgtccgcgg
     2701 tggccgccac gatgcggctc gagtcggcca ggaatccccc gctcaccaga tatacagtgc
     2761 ggccgtcggc cgaccagctc gccggattga agagcccggt cccgatcggc gtcccggccg
     2821 agtcgttggg cccgaagacg tagacccgct ggtctccctt tcccttgttc catgccactg
     2881 caatccgtct cccatcgggc gaacgccggg gaaagaacat ccacccggtg gtatccatgt
     2941 tcgcgagcgg cgagaccttc ccggacttcg ggtcaaccga gatcagggtc cgattgccca
     3001 cccgtggaac caccagcagc gtgtcgctga tccattcggg tgtgtcgccc accgctccgg
     3061 gcgcgacggc ccgggactgt gccccattga gcggaaagaa ccggagcccg cgaccgctcc
     3121 cgcgctcgat ggccgccacg accagcgcat ctcctcgcgg cgaccaggac agtccgcccg
     3181 gttcgatgag ccggcccact tccttcgtct cgccgccaga gagggagaga acctgaagac
     3241 tcaggccgtc cgtctcggtc cgctccgccg ccacactctt ctggtcgggc gaaagccgcg
     3301 ccccttccca tgacgcggat ccggtggtca gcgcgcgtgg cggcctggta gcccctcccc
     3361 cgccgagatc cactaccccg acgttggacc actcctgtcg ctgggtgtac accagctgct
     3421 tgccatcggc cgagaccgac ggcggaggct gaaaagcgat gtaggtctgg gggagaccgg
     3481 cggtgagtcc cgcgcggatc agctccggcg gtgctgcggc cttgccctga cgatcgagcg
     3541 gaagccgcat gagatcgacg acccgctccc tgccgcggag gaagtagagg gccgatccgt
     3601 cgcccgacca tcccggtgcg cccatcatca cgctgtcttc caccaccacg acgggcttca
     3661 tctggcggac gatcatcgtc cagatgcggt tgagccccga tcccgattgc ggcgtcgagg
     3721 cccaggcgat ccgctcgcca tcgagcgacc aggtcgggat actgtgccac catcccggcg
     3781 ataacggcgt catcgccgag tctccggtcg caaggttgcg gatgacgagc gcagatcctc
     3841 cctggggcag gaacgcgagc cgatcaccgg ccggactcag cgctgaccag aacggcaccg
     3901 gcatgtcccg cgccgggccc cccagccgcg gcactcgacg cagcacacca cggggcccgt
     3961 cgaaggtgaa gcagcggatt tcggagccgt cgcccgacca gctgggatag tcgaatcgaa
     4021 gcgaggtgga gagctgaatc gcctgcccgc cgcgcaggtc ctgaagcatc agccggctct
     4081 ggcccgcgct gtcggccacg aacgcgagca gctcgccgtc gggggagagg gcggcgccgc
     4141 tcacctggcc ggtgaaggtg atctgccgct gggccccgct catgccgagc agcaccgggc
     4201 ggggccgcgc gacgaagtat ccggcagcga gcaggaacgc tgccgccact ccacccagca
     4261 cccagcgatt cggccggatc cgccgggcca ccggcatcac cgccgcggga gtggtgccgc
     4321 cgctgggcgt cgccagcggc tcgagctgcc ggagcagctg ctccgcgctc tgccaccggt
     4381 cctcgggatg cttggcgagg caacggtcga cgatggccgc gagcgtgggc gagatatcag
     4441 ggcgatgttg cgccagcggc accggtcggt ccatcacgtg cgcggtgaga atggcctggg
     4501 cggtggagcg gtcgaacggc ggatgccccg tgagcagctc gtaggccaca acgccgaggg
     4561 cgtagacgtc gacccgctga tcgaggttgg gagaggcggt ggcctgttcc ggcgccatgt
     4621 acgccggcgt gccgagcgcc acgccgatgg tgaggtcgcg ctgggcgaga gtcgcagcac
     4681 tcaccgcctt ggccacgccg aagtcggtca ccagcgcgtg gcggccggca aggagaatgt
     4741 tgtcgggctt gatgtcgcgg tggatgatcc ccttgccgtg ggcgtaggcc agcgcgtcgg
     4801 tcacgtcggc catcaggcgg atcacctcgc ccggcgggag gcgcccctcg cggaccagcc
     4861 ggacccggag cgattctccc tcgacgtacg gcatgacca
//
LOCUS       DATIFF010000817         1583 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_718286, whole genome shotgun sequence.
ACCESSION   DATIFF010000817 DATIFF010000000
VERSION     DATIFF010000817.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_718286"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..667
                     /locus_tag="VLD58_11955"
     CDS             <1..667
                     /locus_tag="VLD58_11955"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HSB55067.1"
                     /translation="AVTGPPGMMPVPQSPVAGSEPVPGCPRRGGPLTQWLGRTLLRLG
                     GWRVEGRLPDEPRFVLIVAPHTSNWDFILGLLAMFTIGIRLSWLGKHSIFRFPIVGLL
                     RWLGGEPVDRRVHHGIVEAAIDRFRSRRQWVLGIAPEGTRKRVEQWKTGFYLIAVGAD
                     VPILPVAFDYSRRVVDLGTLFRPTGDQEADIPAIRARYRKEMARHPENFVEPEGRSTA
                     PGG"
     gene            771..>1583
                     /locus_tag="VLD58_11960"
     CDS             771..>1583
                     /locus_tag="VLD58_11960"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HSB55068.1"
                     /translation="MTTLASSRAYTDGAAAPAVWARPDPALAAAGIEGEFVVARVRVL
                     AMALLMMAPTWNVIHHPGDPVHIAGFSVTLAATCAAVGIWLLLRRGRWWPWIGFSSSA
                     LDVSMVSLALTSFLIVGSPMVALNSKVTFEMYFLAIVATSLRYDARVCIVSGLLAMGE
                     YGGLWAYAAATHNLYDPVYVSDSGPYSPVDHSTRLTLLGIATILSVTIVRRAQRLLYL
                     ASRDRLTGLFNRGHFDRALGAAMESAARSGQPLSLALLDIDYFKQINDEYGHT"
BASE COUNT          211 a          568 c          534 g          270 t
ORIGIN      
        1 cgcggtgacc gggcctcccg gaatgatgcc ggtgccgcaa tcccccgtcg ccggatcgga
       61 gccggtcccc ggctgccccc ggcgcggcgg cccccttacc cagtggctgg gtcgcacgct
      121 cctccgactc ggcggctggc gggtcgaggg caggcttccg gacgaacccc ggttcgtgct
      181 catcgtggcg ccccatacct cgaactggga cttcatcctc ggcctgctgg ccatgttcac
      241 gatcgggatc aggctcagct ggctgggaaa gcactcgatc ttccgcttcc cgatcgtggg
      301 cctcctgcgc tggcttggcg gcgagccggt ggatcgccgc gtgcaccacg gcatcgtgga
      361 agcggccatc gaccgattca ggtcgcggcg acaatgggtg ctggggatcg ctccggaggg
      421 aacccgcaag cgggtggagc agtggaagac gggcttctac ctgatcgcgg tcggggcgga
      481 cgtgccgatc ctcccggttg ccttcgatta ctcacggcgt gtcgtcgacc tggggacgct
      541 gttccggccg accggcgatc aggaggcgga catcccggcc attcgggccc gctaccggaa
      601 ggagatggcg cgccatccgg agaactttgt ggaaccggaa gggcggtcca ccgccccggg
      661 agggtgatga ccgcggcttg tggtgaaccc gccgcctgcg gtgaagctca ccacggaggc
      721 acggagggcg tagcggttga ccccgggcgc gagggccgcc attgtcccgc atgaccacgc
      781 ttgcctcctc ccgcgcatac accgacggcg ccgctgcgcc ggcggtctgg gcgcggccgg
      841 atccggcgct cgccgccgcg ggcatcgagg gagagttcgt cgtcgcccgc gtgcgggtgc
      901 tcgcgatggc gctcctgatg atggccccta cctggaacgt catccaccac cccggggatc
      961 cggtccacat cgccggattc tctgtgaccc tggccgcgac ctgcgcggcg gtggggatct
     1021 ggctgctgct gcggcggggg cgctggtggc cctggatcgg cttcagctcg agcgcgctgg
     1081 acgtctccat ggtcagcctc gcgctgacga gcttcctcat cgtcggctcc ccgatggtgg
     1141 cgctcaactc gaaggtcacc ttcgagatgt acttcctggc catcgtcgcc acgagcctcc
     1201 gttacgacgc ccgcgtctgc atcgtgtccg gcctcctggc catgggcgag tatggcggcc
     1261 tctgggccta cgccgcggcg acgcacaacc tgtacgaccc ggtgtacgtg agcgactcgg
     1321 ggccctattc gcccgtggac cattccactc gcctcaccct gctggggatc gccacgatcc
     1381 tgtccgtcac gatcgtccgc cgcgcccagc ggctcctcta cctcgcctcg cgcgaccggc
     1441 tcaccggcct cttcaatcgt ggccacttcg accgggccct cggcgcggcg atggaaagcg
     1501 ccgcccgcag cggccagccg ctgtcgctgg ccctgctcga tatcgattac ttcaagcaga
     1561 tcaacgatga gtacggccac acc
//
LOCUS       DATIFF010000818         2920 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_564969, whole genome shotgun sequence.
ACCESSION   DATIFF010000818 DATIFF010000000
VERSION     DATIFF010000818.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2920)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2920
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_564969"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(107..1822)
                     /locus_tag="VLD58_11965"
     CDS             complement(107..1822)
                     /locus_tag="VLD58_11965"
                     /inference="COORDINATES: protein motif:HMM:TIGR00757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HSB55069.1"
                     /translation="MKREILINGSQRETRVAILEDDRLVELLVDRPDHRRTVGDIYLG
                     RVEAVLPGIQAAFVDIGQEKSAFLHASDLLEPDEDEEPDEEPEDDAEAEVVEGAGEPV
                     TEEEGGERRTGWRGGRDRRRRGRTGRGAAEAPAGNGGQQGNPEGRQREISSRRALPNI
                     QDILKKGQTLPVQVTKEPIGSKGCRVTAQISLPGRFLVYMPYASKVGVSRKIESREQR
                     AKLREMVSKLLPKDAGGVIVRTVAEGVTEEHFRREIDSLLALWRKVNRKKTFVRRAPA
                     LLQRETSLTRGIIRDLFSAKVDALHVDSKELYNEIEGYLSQIDPELIARVQFYTEATP
                     LFDKFDIEAEIRDLFKARVELPTGGSLVIQPTEALVSIDVNTGRYTGKKDPEKTILRT
                     NLEAAREIARQIRLRDIGGIIVCDFIDMETRSNRDKVLQELRTHLGRDRARTKALAVS
                     ELGLVEMTRQRVRPSLWHSMTTDCPTCGGTGRVFTPEVVARRLERALKRAGHEHRERQ
                     LTVRLHPEVALYLLEEEPRLLQTLSKLTGVDLELRDDPMMRLDEFRLMSRPAGRDVTD
                     IYAVA"
     gene            complement(1990..>2920)
                     /locus_tag="VLD58_11970"
     CDS             complement(1990..>2920)
                     /locus_tag="VLD58_11970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSB55070.1"
                     /translation="TSPIVEFGTDEQRRKYVPLLAAGRVLGGFGLTEPGAGSDAGGTA
                     TTAIDKGDHYLLNGSKIFITHAGVGEIFSVTARTEPSTGHRGITSLIVTKDTVDLDQA
                     RTLGVGHAADLPKIAGVRAGKKEDKMGWRASDTRELIFENAVVPKENVLGQPGQGFVN
                     FLKTLDAGRIGIAALSLGIAEGAYEEALRYAGQRKQFGRPIGSFQGVSFQLADMATEI
                     EAGTHLLYHAAWLKQNGRPFKKEAAMAKLYCSELAMRVTTKAVQIFGGYGYTTDYPVE
                     RMMRDAKVCEIGEGTSEIQRIVIGRQILGQIVD"
BASE COUNT          394 a         1051 c          969 g          506 t
ORIGIN      
        1 gggacggcgg gacggcggga cggcgggacg gcgggacggc gggacgaagc gaggggatac
       61 tcgattgggt gtcggatcgc caggtgggcg gagccctcga cccctcctac gccaccgcgt
      121 agatgtccgt cacgtcccgc cccgccggcc ggctcatcag gcggaactcg tccagccgca
      181 tcatcgggtc gtcccggagc tcgagatcca ccccggtcag cttggacagg gtctgaagca
      241 gccggggctc ctcctccagc aggtagagcg ccacctccgg gtgcagccgc accgtgagct
      301 ggcgctcccg gtgctcgtgg ccggcccgct tgagggcgcg ctccagccgc cgggccacca
      361 cctcgggcgt gaacacccgg ccggtcccgc cgcaggtggg acagtcggtg gtcatcgagt
      421 gccacagcga cgggcggacc cgctgccggg tcatctccac cagccccagc tccgacacgg
      481 ccagcgcctt ggtccgggcc cggtcgcggc ccaggtgggt ccggagctcc tggagcacct
      541 tgtcccggtt ggaccgggtc tccatgtcga tgaagtcgca gacgatgatc ccgccgatgt
      601 cacgcagccg gatctgccgg gcgatctccc gcgccgcctc caggttggtg cggaggatgg
      661 tcttttccgg gtccttcttg ccggtgtacc ggccggtgtt gacgtcgatg ctcaccagcg
      721 cctcggtcgg ctggatcacc agcgagccgc cggtgggcag ctccacccgg gccttgaaca
      781 ggtcccggat ctcggcctcg atgtcgaact tgtcgaacag cggcgtggct tcggtgtaga
      841 actgcacccg cgcgatcagc tccggatcga tctggctcag gtacccctcg atctcgttgt
      901 agagctcctt cgagtccacg tgcagcgcgt ccaccttggc gctgaacaga tcgcggatga
      961 tcccccgggt gaggctggtc tcccgctgca gcagcgccgg cgcccggcgc acgaaggtct
     1021 tcttccggtt gaccttgcgc cacagggcca ggagcgagtc gatctcccgg cggaagtgct
     1081 cctcggtgac cccttcggcc accgtccgca cgatcacccc gccggcgtcc ttgggcagga
     1141 gcttggagac catctcccgc agcttggccc gctgctcccg gctctcgatc ttgcgactga
     1201 ccccgacctt ggaggcgtac ggcatgtaca ccaggaaccg cccggggagg gagatctggg
     1261 cggtgacccg gcaccccttg ctgccgatcg gctccttggt gacctggacc gggagggtct
     1321 gacccttctt gaggatgtcc tggatgttgg ggagcgcccg ccgggaggag atctcgcgct
     1381 gccgtccctc gggattgccc tgttgcccgc cgttccccgc cggcgcctcc gcggcgcccc
     1441 ggccggtccg gccccggcgc cgccggtccc gcccgccccg ccacccggtc cgccgctccc
     1501 cgccctcctc ctcggtcacg ggctccccgg cgccctcgac cacttcggcc tcggcgtcgt
     1561 cctccggttc ctcgtcgggc tcctcgtctt cgtcgggttc cagcaggtcg gaggcgtgga
     1621 ggaaggcgct cttctcctgg ccgatgtcca cgaacgcggc ctggatgccg gggaggaccg
     1681 cctccacccg gccgaggtag atgtctccca ccgttcggcg atgatccggg cggtcgacca
     1741 gcagctccac caggcgatcg tcttcgagga tggccacgcg ggtttcccgc tggctcccat
     1801 tgatcaggat ctcgcgtttc aaaatgctcg acctcggccg tggatcaggc tcgttctgtc
     1861 acgagaaacg cgcctgctgc ggcgagtctg cccggggaga cgagacggag caatgccaac
     1921 aggaaggcgc gtcgccgatg gccgggaagt atatatgggg caagaacaac gcgctatcag
     1981 ccccagccgt cagtctacga tctgtcccag gatctgccgg ccgatgacga tccgctggat
     2041 ctcgctggtt ccctctccga tctcgcacac cttggcgtcc cgcatcatcc gctccaccgg
     2101 atagtcggtg gtgtagccgt accccccaaa gatctggacc gccttggtgg tgacccgcat
     2161 cgccagctcg gagcagtaga gcttagccat ggccgcctcc ttcttgaacg gccggccgtt
     2221 ctgcttgagc caagcggcgt gatagaggag atgggtcccg gcctcgatct cggtcgccat
     2281 gtcggccagc tggaaactga ccccctggaa gctcccgatc ggccggccga actgcttccg
     2341 ctgcccggcg tagcgcaacg cctcctcgta ggccccttcc gcgattccca gcgacagagc
     2401 cgcgatcccg atccggccgg cgtcgagggt cttgaggaag ttgacgaacc cctgccccgg
     2461 ctggcccagc acgttctcct tgggcaccac cgcgttctcg aagatgagct cccgggtatc
     2521 gctggcccgc cagcccatct tgtcttcctt cttgccggcc cggacccccg cgatcttggg
     2581 caggtcggcc gcgtggccca cgccgagcgt ccgcgcctgg tccaggtcca ccgtgtcctt
     2641 ggtgacgatg aggctggtga tcccccggtg gccggtgctc ggctcggtcc gggcggtgac
     2701 cgagaagatc tcgcccacgc cggcgtgggt gatgaagatc ttggacccgt tgagcaggta
     2761 gtgatcgccc ttgtcgatgg cggtcgtggc ggtgccgccg gcgtcactgc cggcgcccgg
     2821 ctcggtgagg ccgaacccgc ccagcacgcg ccccgcggcc aggagcggga catacttgcg
     2881 tcgctgctcg tccgtgccga actcgacgat gggggaggtg
//
LOCUS       DATIFF010000819         2392 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1488651, whole genome shotgun sequence.
ACCESSION   DATIFF010000819 DATIFF010000000
VERSION     DATIFF010000819.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2392
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1488651"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..711
                     /locus_tag="VLD58_11975"
     CDS             <1..711
                     /locus_tag="VLD58_11975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55071.1"
                     /translation="IGLGALGVFAVGMAVIFVARRVIAKVKTVAESSDPITIPLAFVP
                     FRLDGSRLGTFDQAVLMRKSPKEVSALHLSVQLADSAGAARLAGCGLLARFTEKPGGD
                     GAVLTDADFTCVKPDSVAPAGAEPFGRVVFQPGDLTARLFVPADVARHFHRDMIDIRV
                     DASADSLAQAADSIADAAGRAADSMGEAASRMADSISSLHERQADSIREAALRMADSM
                     RQRAHVLRDSIRASLRRP"
     gene            720..1325
                     /locus_tag="VLD58_11980"
     CDS             720..1325
                     /locus_tag="VLD58_11980"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HSB55072.1"
                     /translation="MLLVLDNYDSFTYNLVQYAGELGAEPVVYRNDALTPDEALALEP
                     AAIIVSPGPCTPREAGISVPLVRAAAGRVPVLGVCLGHQAIGAAFGGAVVRADRIMHG
                     KTTDVVHHGRDLFAGLPSPLRVMRYHSLVVSPQGFPAELEVTAWSADRPPGSEIMALR
                     HRSLPVFGVQFHPESIGTSEGRKLLANFLELAGISVGAVSR"
     gene            1506..>2392
                     /locus_tag="VLD58_11985"
     CDS             1506..>2392
                     /locus_tag="VLD58_11985"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HSB55073.1"
                     /translation="MPSGTNATKYIFVTGGVVSSLGKGIAAASLGRLLVERGLSVTMQ
                     KFDPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDRSLSQQNNITTGRIYQ
                     SVINKERRGEYLGSTVQVIPHITDEIKNAIRRTAPGHDVVITEIGGTVGDIESLPFLE
                     AIRQFRQEVGRDNALFMHLTLVPYIAAAGELKTKPTQHSVRELMQIGIQPDILVCRSE
                     QPVSADIKRKIALFCNVEFGAVVESPDVRTIYEIPLRFQEQGFDRVVCERLNLETKEP
                     DLTAWKAMTDKILRPVDRVR"
BASE COUNT          356 a          872 c          771 g          393 t
ORIGIN      
        1 atcgggctgg gcgccctcgg cgtcttcgcc gtcgggatgg ccgtcatctt cgttgcccgc
       61 agggtgatcg cgaaggtgaa gacggtcgcg gaaagcagcg acccgatcac catcccgctg
      121 gcgttcgttc ccttccgcct cgacgggagc cggctgggga cgttcgacca ggccgtgctg
      181 atgcgcaagt cacccaagga ggtgagcgcc ctgcacctga gcgtgcagct cgccgactcg
      241 gccggcgcgg cccggctcgc cggctgcggt ctcctcgccc ggttcaccga gaaaccgggg
      301 ggagacggcg ccgtgctcac cgacgccgac ttcacctgcg tcaagccgga ctcggtggcg
      361 ccggccggcg ccgagccctt tggccgggtg gtctttcagc cgggagacct cactgcacgg
      421 ctcttcgtcc cggccgacgt ggcccggcac tttcaccgcg atatgatcga cattcgggtg
      481 gacgcctcgg ccgattcgct cgcccaggcc gccgattcca tcgccgacgc cgccggccgg
      541 gcggccgatt cgatgggcga ggccgcgtcc cgcatggccg attccatctc ctccctgcac
      601 gagcgccagg ctgactcgat ccgggaggct gcgcttcgca tggcggactc gatgcgccag
      661 cgggcccacg tcctgcgcga ttcgatccgc gcctccctcc gccgtccctg agcgccccga
      721 tgctcctggt cctcgacaac tacgacagct tcacgtacaa cctggtccag tacgcgggcg
      781 agttgggcgc cgagccggtg gtctaccgga acgacgcgct cacgccggac gaggcgctgg
      841 cgctggagcc ggcggcgatc atcgtgtcgc cgggcccgtg cacgccgcgg gaggcgggca
      901 tctcggtgcc gctcgtgcgg gccgcggccg ggcgggtgcc ggtactgggc gtctgcctcg
      961 gccaccaggc catcggcgcc gccttcggcg gcgccgtggt gcgcgccgac cgcatcatgc
     1021 acggcaagac gaccgacgtc gtgcaccacg gccgggacct cttcgcgggg ctgccctcgc
     1081 cgctccgggt catgcgctat cactcgctcg tggtctcacc gcagggcttt cccgccgagc
     1141 tcgaggtgac cgcctggtcg gccgaccgcc cgcccgggag cgagatcatg gccctcaggc
     1201 accgctccct cccggtgttc ggggtgcaat tccaccccga gtccatcggg acgtcggagg
     1261 ggcggaagct gctggccaat ttccttgagc ttgcgggcat aagtgttgga gctgttagcc
     1321 gttagccatt agccgttagc ccttggcaca acttttgact ccgcagcccc cgctggttac
     1381 cttcggtgat gcgccaccga agcgtcttct cggctccacc cgtttcccat tctagccccg
     1441 cgtgtcccct gaccggtgct gctccggtcc gcgcccaccg gcccttttct taagagggag
     1501 ctctcatgcc cagcgggacc aacgcgacca agtacatctt cgtgaccggc ggcgtcgtct
     1561 cctccctcgg gaagggcatc gccgccgctt cgttggggcg gctgttggtg gagcgcgggt
     1621 tgagcgtgac gatgcagaag ttcgacccct acatcaacgt cgatcccggc acgatgtcgc
     1681 cgttccagca cggcgaggtc ttcgtcaccg acgacggcgc ggaaacggac ctcgacctcg
     1741 gccactacga acgcttcatc gatcgctccc tctcccagca gaacaacatc accaccggcc
     1801 ggatctacca gagcgtcatc aacaaggagc gccggggcga gtatctcggc tccaccgtcc
     1861 aggtcatccc ccacatcacc gacgagatca agaacgccat ccgccgcacc gcgccggggc
     1921 acgacgtcgt gatcacggag atcggcggga cggtgggcga catcgagtcg ctgccgttcc
     1981 tcgaggcgat ccgccagttc cgccaggaag tgggccgcga caacgcgctc ttcatgcacc
     2041 tcacgctggt gccctacatc gccgcggccg gcgagctcaa gaccaagccc acccagcact
     2101 cggtgcggga gctgatgcag atcgggatcc agcccgacat cctggtgtgc cggagcgagc
     2161 agcccgtctc cgccgacatc aagcggaaga tcgcgctctt ctgcaacgtc gagttcggcg
     2221 ccgtggtcga gagccccgac gtccgcacga tctacgagat cccgctgcgc ttccaggaac
     2281 agggcttcga ccgcgtggtg tgcgagcgcc tcaacctcga gaccaaggag cccgatctca
     2341 ccgcctggaa ggcgatgacc gacaagattc tccgcccggt ggaccgggtg cg
//
LOCUS       DATIFF010000820         4929 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_103733, whole genome shotgun sequence.
ACCESSION   DATIFF010000820 DATIFF010000000
VERSION     DATIFF010000820.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4929)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4929)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4929
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103733"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1939)
                     /locus_tag="VLD58_11990"
     CDS             complement(<1..1939)
                     /locus_tag="VLD58_11990"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HSB55074.1"
                     /translation="MTGTLPDIAPDFRALLERHADRLDLEQIDRALRFSASAHRGQKR
                     MSGEDFIQHSIAVAKTLVEQQLDSTSIIAALLHDVVEDSSIRTEDIAREFGPEVAGIV
                     DGLTKIASLTFRSSAEQQVENYRKLLLSIAKDARVIIIKLADRLHNMRTLDPLPPEKR
                     VRIATETREIYAPLAHRFGMAGIKAELEDLTFKYLEPEDYRSLVQQVAAKRAEREQVI
                     LKLKVPLEHELKSAGISWFDVTGRPKHLWSIYQKMKKRNKPFDEIYDLMAVRVTVKSV
                     QECYHVLGIIHHNWTPLQERIKDYIASPKSNAYQSLHTTIFGPGGHLFEVQIRTQEMH
                     RTAEYGIAAHWLYKSDGKKSEIEAHFGWFRQLLELQQDAHTPEEFLEFLKVDLYQDEI
                     FVFTPKGDVKQLPKGATPIDFAFMVHSDVGMRCQGSKVNGRIAPLHRELKNGDTVEVL
                     TGPTPRPSRDWLAHVKTARARHKIKAWIRHQEDQEAQELGHELLQRETRRRRLATPEP
                     DQLDKAAMSLGLAEGRLLEIGLGRGDVTIMQVIRAIYPELPPDDLQEPKPSVIGRVID
                     RLRLGSGIKIQGLSGLMVRYAQCCQPVPGDAVVGYVTQGRGISIHRADCPNLLTLSGE
                     GRRVEIDWQESKGEAFAVRLAV"
     gene            complement(2067..3599)
                     /locus_tag="VLD58_11995"
     CDS             complement(2067..3599)
                     /locus_tag="VLD58_11995"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSB55075.1"
                     /translation="MGSRLLGLLLAGSALTGWVGGEIVNNPNSGAEADWAETILASAK
                     GTSPLMCALASRSVDGRFGWGGYGPPGMEDTSAALRWVYHRKPTEDAVPALVAGLSDQ
                     DACVQSISARLLARIDAPSATRGILQALASSTAATRIAASVSLGLGGVEAGLNPLIER
                     LRDGTSEVRAVAAWALGALDNGRAVPPLREVLRDGAAPVRAAAATALGRLDDSSAVNG
                     LARLLKSDPDERVRLAAAQALGRLGARSSSEALSAGLGDKSAAVRRACAWALGNLGIP
                     ETGPAVAKAMDDADWEVREMATWAVVQLGKGASVTALGRRATTDERAEVRRTAAWGLG
                     SIEDRAAVEPLVTVLRSDRDRDVRRMAAWGLGQLDDQRGVTALTAALQDSSSDVRGVA
                     AWALGQIKPDRAPPALIAAVRDSDRDVRKRAAWALGKIEDPASVKSLRDAMRDPDGEV
                     RKTVLWALSQMDDEAARDAIVEQLKSDDPAVRADAARSLGHMRQNPWPWPSPMPMPRP
                     FP"
     gene            complement(3715..>4929)
                     /locus_tag="VLD58_12000"
     CDS             complement(3715..>4929)
                     /locus_tag="VLD58_12000"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSB55076.1"
                     /translation="RLRIESERACDDLVLGTGTRASEYADHLLQILRAVPRSPVPAAV
                     LPFAERGEFEGRVLAILEANAHREPASRRGAVTVTSLVVLLVAPLALLAPVRRVAPPP
                     TPTEQWSAGLLSPGSNRAVQDSSVRSQPSVRQRPTAREKASPTPDPAGVAPSTEPIKP
                     AVESVPVAPDTGDGSTVVRSLISALNDTVAAVRENAAYSLGRLGAASAVPTLARLVER
                     DPAASVREMSAWALGTLRGREGLSGLVAAVQRDTSASVRATGVWALAQLDLDGAIPAL
                     TAALRDKAVEVRSRAAWAIGSIRPATVPPALLQLGSDTSVEVRRRAAWAMGQIRDSAA
                     VPALSQLVQDPAKDVREAAFWALGNQEGSAAEAALLKALQAPDPALRAQAARALSGAR
                     NRPWPWPWPWPR"
BASE COUNT          763 a         1707 c         1685 g          774 t
ORIGIN      
        1 tcaccgccag ccgcacggcg aacgcctcgc ccttcgattc ctgccagtcg atctcgaccc
       61 gccgcccctc gccggaaagc gtcagcaggt tgggacagtc ggcacggtga atcgagatgc
      121 cgcgtccctg agtcacgtac ccgacgacgg catcgccggg gaccggctgg cagcactggg
      181 catagcgtac catcagaccg gagagtccct ggatcttgat gcccgaaccg agccggagcc
      241 ggtcgatgac ccgcccgatc acactgggct tgggctcctg cagatcgtcc ggcggcagct
      301 cgggatagat cgcgcggatg acctgcatga tggtgacatc gccgcggccc aggccgattt
      361 cgagcaggcg cccttcggcg agacccagac tcatcgcggc cttgtcgagc tggtccggct
      421 cgggcgtcgc cagccggcgg cggcgggtct cacgctgcag cagctcgtgt cccagctcct
      481 gcgcctcctg gtcctcctga tgccggatcc aggccttgat cttgtggcgg gcccgcgccg
      541 tcttcacgtg ggcgagccag tcgcggctgg gccggggcgt gggaccggtg aggacctcga
      601 cggtgtcgcc gttcttgagc tcgcggtgga gcggcgcaat ccggccgttc accttgctgc
      661 cctgacagcg catcccgacg tcgctgtgca ccatgaacgc gaagtcgatg ggagtcgcac
      721 ccttgggcag ctgcttgacg tctcccttgg gcgtgaagac gaagatctcg tcctggtaga
      781 gatcgacctt gaggaactcc aggaattcct cgggagtgtg cgcgtcctgc tggagttcca
      841 gcagctggcg gaaccagccg aagtgagcct cgatctcgct cttcttgccg tcgctcttgt
      901 agagccagtg cgccgcgatg ccgtattcgg cggtgcggtg catctcctga gtccggatct
      961 gcacctcgaa gaggtgcccg cccggcccga agatcgtggt atgcagcgac tggtaggcgt
     1021 tcgacttggg actcgcgatg tagtccttga tccgctcctg caacggggtc cagttgtggt
     1081 gaatgatgcc caggacgtga tagcactcct ggaccgattt caccgtcacc cgcaccgcca
     1141 tcaggtcgta gatctcgtcg aacggcttgt tgcgcttctt catcttctgg tagatcgacc
     1201 agagatgctt gggccgcccg gtcacgtcga accaggagat cccggccgac ttgagctcgt
     1261 gctccagcgg aaccttgagc ttgaggatga cctgctcccg ctcggcgcgc ttcgccgcga
     1321 cctgctgcac cagcgagcgg tagtcctccg gctcgaggta cttgaaggtg aggtcctcga
     1381 gctccgcctt gatgccggcc ataccgaagc ggtgcgccag cggggcgtag atctcgcggg
     1441 tttcggtggc gatccggacc cgcttctcgg gtgggagcgg gtcgagggtc cgcatgttgt
     1501 ggagccggtc ggccagcttg atgatgatga cccgggcgtc cttggcgatc gacaggagca
     1561 gcttgcggta gttttcgacc tgctgctccg ccgaggaacg gaaggtcagg ctggcgatct
     1621 tggtgagccc gtcgacgatg cccgcgacct cggggccgaa ttcccgggcg atgtcctcgg
     1681 tgcggatcga ggagtcttcg accacatcgt gcaacagggc ggcgatgatc gaggtggagt
     1741 cgagctgctg ctccaccagg gtcttggcca ccgcaatcga gtgctggatg aagtcctcgc
     1801 ccgacatgcg cttctggccc cggtgggccg aggcgctgaa ccggagggcg cgatcgatct
     1861 gctcgagatc cagccggtcg gcatggcgct cgaggagggc gcggaaatcc ggtgcgatgt
     1921 cgggcagcgt tccagtcaca gccatccctc tcggggagca cacaaccccc gcccctcggc
     1981 cagacgaccg gggggagggg ctcagggtgt actctaaacc taattccgca ccaccggggc
     2041 agaattggca agagggagcc cccggttcag gggaatggcc ggggcatcgg catcggcgag
     2101 ggccagggcc acgggttctg ccgcatgtga cccagggaac gggccgcgtc ggcgcgaaca
     2161 gcgggatcat cgcttttgag ttgctccacg atggcatccc gggcggcctc gtcatccatc
     2221 tgtgacaggg cccagagcac agtcttccgc acctccccat ccgggtcgcg catggcgtcc
     2281 ctgagggatt tcaccgaggc ggggtcctcg atcttgccga gggcccacgc ggcccgcttg
     2341 cggacgtccc ggtcggagtc gcgcaccgcg gcgatcagcg ccggcggagc gcgatccggc
     2401 ttgatctggc ccaacgccca ggccgctacc ccccggacat cggaggaact gtcctgaagg
     2461 gcggcggtca gcgcggtgac accgcgctgg tcgtccagct gccccaaccc ccacgccgcc
     2521 atccgtcgca catcacggtc tcgatcgctt cgaaggaccg tcacgagcgg ctcgacggcc
     2581 gcccggtcct cgatcgaacc cagaccccag gccgcggtcc gccggacctc ggcccgctcg
     2641 tcggtggtgg cgcggcggcc cagggccgta accgatgcgc ccttgcccag ctgcaccacg
     2701 gcccaggtgg ccatttcgcg cacttcccag tcggcgtcgt ccatcgcctt ggccactgcc
     2761 ggacccgtct cgggaatccc cagattgccc agtgcccagg cgcatgcccg gcgcaccgcg
     2821 gcgctcttgt cgcccagacc ggcactcagc gcctcgctgc tgctccgggc cccgagccgg
     2881 cccagggcct gtgccgctgc cagccgcacc cgctcatcgg gatcagactt gagcagccgg
     2941 gcgaggccat tcaccgcgga ggaatcgtcg agacgtccca gcgcggttgc cgccgccgct
     3001 cggactggcg cggcgccatc tcgcaggacc tcacggagcg gcggcacggc ccggccgttg
     3061 tcgagcgcac ccagggccca ggcggcgact gcccgtacct ccgaagtccc atccctgagg
     3121 cgttcgatca gcggattgag tcccgcttcg acacctccaa ggcccaacga tacggaagcg
     3181 gcgatccggg ttgcggcagt gctggaagcc agggcctgaa ggatccctcg cgtggccgag
     3241 ggagcgtcga tccgggccag aagccgggcg gatatggact ggacgcaggc atcctgatcg
     3301 gagaggccgg caacgagtgc cggcaccgca tcctcggtcg gcttccggtg gtagacccag
     3361 cgcaacgcgg cactggtgtc ctccatcccc ggcggaccat agccgcccca gccgaaccgg
     3421 ccatcaaccg accgcgacgc cagcgcgcac atcagcggtg aggtgccctt ggccgaggcc
     3481 aggatcgtct cggcccaatc cgcctcggca ccggagttgg ggttgttcac gatctcgcca
     3541 ccgacccacc cggtcagggc gcttcctgcc agcagcaggc ccagcagtct cgatcccatt
     3601 cgtatcctcc ccatgagtat tcctccggca gaagtcagtg ctgaattttc agcactcgcg
     3661 atagaactga ggcccgggtc cggtccgaac ccgggcgcgt tgagctgacg ggcgctatct
     3721 aggccagggc cagggccacg gccacgggcg attgcgggcg ccgctcagcg cccgcgccgc
     3781 ctgcgcccgg agcgccggat cgggcgcctg gagcgccttg agcaatgccg cctcggcggc
     3841 gctcccctcc tggttgccca gcgcccagaa ggcggcctcg cggacatcct tcgcggggtc
     3901 ctgcaccagc tgactcagcg ccggcactgc ggccgagtcg cgaatctggc ccatggccca
     3961 ggcagcgcgc cgccgcacct cgaccgaagt gtcgctcccc agctgaagca gcgcgggcgg
     4021 cacggtggcg ggacgaatgg aaccgatggc ccacgcagcc cgggaacgga cctcgaccgc
     4081 cttgtcgcgc aacgccgcgg tgagtgccgg gatggcccca tcgaggtcga gctgggccag
     4141 ggcccagacc ccagttgcgc gcacggaggc cgaggtatcg cgctgaacgg cggcgacgag
     4201 gccactcagg ccttcacggc ctcgcagggt gccaagcgcc caggcgctca tctcacgcac
     4261 gctggcggcg gggtcgcgtt cgaccaggcg cgccagcgtg ggcacggccg atgcggcgcc
     4321 gagccgaccg agtgagtagg ccgcgttctc ccgaaccgct gccacagtgt cgttcagggc
     4381 gctgatgagc gagcgaacca ccgtactgcc gtcgccggta tcgggggcga ccggcacgga
     4441 ctcgaccgca ggcttgatgg gctcggtgga aggcgccaca ccggcaggat ccggcgtcgg
     4501 tgacgccttc tcccgggccg tgggacgctg acgcacgctg ggctgagacc ggacactcga
     4561 gtcctggacg gcgcggttcg aaccgggact gagcagtcct gccgaccact gctccgttgg
     4621 cgttggcggc ggcgccaccc ggcgcaccgg agcgaggagt gccaggggcg ccaccagcag
     4681 gaccacgagc gaagtcacgg tgactgcgcc acggcgagag gcgggttcgc gatgagcgtt
     4741 ggcttcgagg atcgcgagga cccggccttc gaactcgccc cgttcggcaa agggaagcac
     4801 tgcggcaggc accggagagc gtgggaccgc ccgcaggatc tggagcaggt gatcggcata
     4861 ctcggaggct ctggtacccg tccccagcac caggtcatcg caggcgcgct cgctttcgat
     4921 ccggagccg
//
LOCUS       DATIFF010000821         1048 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1181615, whole genome shotgun sequence.
ACCESSION   DATIFF010000821 DATIFF010000000
VERSION     DATIFF010000821.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1181615"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1048
                     /locus_tag="VLD58_12005"
     CDS             <1..>1048
                     /locus_tag="VLD58_12005"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSB55077.1"
                     /translation="ILLASALQAQDLIAIKAGQLVDVDRGEVRANQIILVRGERIESV
                     QAAGAAVPRGATVIDLSGYTVSPGLIDCHTHIADAIQTASVADALTYSQAQIAFIGVR
                     QARSTLMAGFTAVRDVGTFRAFVDAALRNAINDGTVPGPRMKVAGAYITVSSGGGEVT
                     GLAPDVILPPDFRRGVANSATEVRQRVRELLNGGADFIKIIATGAVLAPGTEPGAPEY
                     TEEEIRAAVDEAANYGTFVAAHAHGAEGIKRAVRAGVRSIEHGSLADDEALALMKEHG
                     TWLVADIWNGDYIDSVGTRDHWSEEILRKNRETTETQRSAFRKAVTLGVHIAYGTDSG
                     VYPHGLNAAQLPYMV"
BASE COUNT          179 a          368 c          350 g          151 t
ORIGIN      
        1 gatcctcctc gcatcggccc ttcaggccca ggacctgatc gccatcaagg ccggacaact
       61 ggtggatgtc gaccggggtg aggtccgggc caaccagatc atcctggtcc ggggcgagcg
      121 gatcgagtcg gtgcaggccg caggggccgc cgtgccgcgc ggcgccaccg tcatcgacct
      181 gagcggctac accgtgagcc ccggcctgat cgactgccat acacatatcg ccgatgccat
      241 ccagaccgcc agcgtggccg acgccctcac ctactcccag gcacagatcg ctttcatcgg
      301 ggtgcggcag gcgcgctcga ccctgatggc cgggttcacc gccgtgcgcg atgtcggcac
      361 cttccgggcc ttcgtggacg ccgcgctccg gaacgccatc aacgacggca ccgtgccggg
      421 tccccgcatg aaggtggccg gcgcctacat caccgtatca tccggcggag gtgaagtgac
      481 cggcctcgcg cccgacgtga tcctgccgcc tgacttccgt cgtggcgtgg ccaactcggc
      541 caccgaggtg cgccagcggg tgcgcgagct cctcaatggc ggggccgatt tcatcaagat
      601 catcgcgacc ggcgcggtcc tggcgcccgg caccgagccc ggcgcgccgg agtacaccga
      661 agaggagatc agggcggccg tcgacgaggc ggccaactac ggcaccttcg tggccgcgca
      721 cgcccacgga gccgaaggca tcaagagggc ggtccgggcc ggggtgcgtt cgatcgagca
      781 cggttccctc gccgacgacg aagccctggc cctgatgaag gagcacggca cctggctggt
      841 agccgatatc tggaacggcg actacatcga ctcggtcggc acccgggatc actggtccga
      901 ggagatcctc cggaagaacc gggaaactac ggagacccag cggagcgcct tccggaaggc
      961 tgtcactctc ggggtgcata tcgcgtacgg caccgacagc ggagtctatc cccatgggct
     1021 caacgcggcc cagcttccgt acatggtg
//
LOCUS       DATIFF010000822         1843 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_103894, whole genome shotgun sequence.
ACCESSION   DATIFF010000822 DATIFF010000000
VERSION     DATIFF010000822.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103894"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..248
                     /locus_tag="VLD58_12010"
     CDS             <1..248
                     /locus_tag="VLD58_12010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55078.1"
                     /translation="LQLVRGDRLPPGSSVSVRIGAESRRVVSVPREAVGAEGYALVWD
                     SNRTTLRQVTLGGRLPGDRVEVVSGLAPGEKLIRTGP"
     gene            245..>1843
                     /locus_tag="VLD58_12015"
     CDS             245..>1843
                     /locus_tag="VLD58_12015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55079.1"
                     /translation="MSERPRLRPDLVFVEQTYRGELSFIVKDPTTHKYFRFRPVEIAV
                     MRALDGARTAAEAAAALGEQGIRVSGAAVGKFADKLKNMGLCERTLRERSVLLMERVR
                     AQRRQRLGKGPFRGELLRLRWSMGDPDRFMDRTIPWLRFCFTRRFVIFSIVLFAVYFL
                     ILAMRWPQFSAALDDLYHLRLSGGDFAILWLTSAVIIAFHELGHGYTCKHFGGHVHEM
                     GAMLFYFEPAFFCNVNDAWTFPELRARLWVTAAGSWIQMVLAGFAAILWWMAAPGTVL
                     GQIGLFGVLMGGITTVLMNLNPLVPLDGYYALSDWLEVPNLRQRALAYLGWTVKARLL
                     RLDLPMPAADEREQRIFLAYGAFAAVYIGSIFLLVGGLVYGWLSQALGAVGIAIFAFA
                     VWLMARDGLRSWGRNLVQAWQEWRARVTERGARRSRRAAGAGVLLAVLLLGAIVHLPI
                     TVAGPFEVMPAARVALVAPDSGVVFQVLGTEGSLVSAGTPVIRIRNLALEREAEASTR
                     AADSLGIRETQARARGAEGEAARLA"
BASE COUNT          236 a          601 c          672 g          334 t
ORIGIN      
        1 tgctccagct ggttcggggc gaccggctgc cccccggcag cagcgtgagc gtacggattg
       61 gtgcggagag ccgtcgagtg gtcagcgtgc cccgggaggc ggtcggcgcc gaaggctacg
      121 ccctggtctg ggattcgaac cgcaccacgc tccggcaagt caccctgggt gggcgccttc
      181 ccggcgatcg ggtggaggtg gtgagcggcc tggcgccggg cgagaagctg atccggaccg
      241 gcccgtgagc gagcggcccc gcctacgccc ggatctcgtg ttcgtcgagc agacctaccg
      301 aggcgagctg agcttcatcg tcaaggatcc caccacccac aagtacttcc gcttccgccc
      361 ggtggagatc gccgtgatgc gggcgctgga tggcgcgagg accgccgcgg aagcggccgc
      421 ggcgctcggg gagcagggca tccgggtcag cggcgccgcg gtcggcaaat tcgccgacaa
      481 gctcaagaac atggggctct gtgagcgtac ccttcgggag cgctcggtgc tgctcatgga
      541 gcgggtccgc gctcaacggc ggcagcggct cgggaaggga ccattccgag gcgaattgct
      601 gcggctccgc tggtccatgg gcgatcctga ccggttcatg gaccggacca tcccgtggct
      661 gcggttctgc ttcacccgcc gctttgtaat cttctcgatc gtgctcttcg cggtgtactt
      721 cctgattctc gcgatgcgct ggccccagtt ctcggcagcg ctggacgacc tctaccatct
      781 ccggctgtca ggcggcgact tcgcgatcct ctggctcacc agcgccgtga tcatcgcgtt
      841 tcacgagctg ggccacgggt acacctgcaa gcatttcgga gggcatgtgc acgagatggg
      901 tgcgatgctc ttctacttcg agccggcgtt cttctgcaac gtgaacgacg cgtggacctt
      961 tcccgagttg cgcgcccgtc tctgggtgac cgcagcgggt tcctggatcc agatggtgct
     1021 ggcaggcttc gccgcgatcc tctggtggat ggccgcgccg gggacggtgc tcggccaaat
     1081 cgggctcttt ggagtcctga tgggcgggat taccacggtg ttgatgaacc tcaaccccct
     1141 ggtcccgctc gacgggtatt acgcgctgag cgactggctg gaggtgccga acctgcggca
     1201 gcgcgcgctg gcatacctgg gatggacggt gaaggcgcgc ctgctccgac tcgacctgcc
     1261 gatgcccgcc gcggacgagc gggagcaacg gatctttctc gcctacggcg ccttcgccgc
     1321 ggtctacatc ggctccatct tcctgctggt tggtggcctg gtctatggct ggctgtccca
     1381 ggcgctcggc gccgtcggga tcgcgatctt cgccttcgcg gtctggctga tggctcgcga
     1441 cgggctgcgc tcctggggcc ggaacctggt gcaggcgtgg caggagtggc gggcgcgggt
     1501 gacggagcgg ggggctcggc gctcccgccg ggccgccggc gcgggcgtgc tcctggcggt
     1561 gctgctgctg ggtgccatcg tgcatctgcc gatcaccgtc gccggtccgt tcgaggtgat
     1621 gccggcggcc cgtgtcgcgc tggtcgcgcc cgattcggga gtggttttcc aagtgctcgg
     1681 gacggaaggc tcgctggtga gcgcggggac gcccgtgatc cggatccgga atctcgccct
     1741 cgagcgcgag gccgaggcct cgacccgcgc cgcggactca ctggggattc gggagaccca
     1801 agcccgtgcc cgcggcgccg agggcgaagc ggcgcgcctt gcg
//
LOCUS       DATIFF010000823        10494 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_871451, whole genome shotgun sequence.
ACCESSION   DATIFF010000823 DATIFF010000000
VERSION     DATIFF010000823.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10494
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_871451"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2210)
                     /locus_tag="VLD58_12020"
     CDS             complement(<1..2210)
                     /locus_tag="VLD58_12020"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /protein_id="HSB55080.1"
                     /translation="MPLLPLLLALAGAPADTVRVVLVATTDLHGYATDWDYLQNSPWP
                     GGLSRAVSVVDSLRLKYPGQVLVVDAGDALQGSIFAAYYGRETRRDPHPVIEAMNLMG
                     YDAATPGDHDFDFGVDRFQQALAGASFPFVSANLRVLPADTLFFKSYVVVNRNGVRVA
                     ITGFTTPAAMVLDGDKLKGRMRVDRIEPRVDAVLREMRQDADFTVVLSHSGIDGGASY
                     DTTGVGGENVSARIAAGALKPDLVVVGHSHKDVVDTVIGGVHFVQPRPEGRSLAVVYL
                     SFVPKGAGLELARVKAERIPLEDVRPSERVQRRLLDPHRAVLGWVATRVGESERRLAM
                     AAGRVEDVPAMRFIHEVQRRTARADLSAASVPDTKAMLDEGDITAGEVFRIYPAENTL
                     RAIRISGAQLKAYLEQSARYFYADSTGLVATNRFVPPANYDVIGGAAYTIDLSRPMGQ
                     RITRLEVKGRPVAPADSFTLALPSSRQLGLGNFAMLAGAPVVYDKGEFIRDLLAADIR
                     RRHTLLRTDFNGADWSLAPAELAKKARSIFVKDVVAGPEPVAETPPPLNLPVGPNAKE
                     LARRDSILREQDKAEAAARVTLVTMKLPAEPGAGKNLTRLVADAYMNALRADLSIVRS
                     DEVGDRLPAGPLTAQQIAAALPGRSRMMVIPVTGAELEDILEHVVESESPCCEVAGVT
                     VEFDPKAKPMERVKKVRLPGGKSIDRKRTYQLAVSEKVIEGDVFTLGATDCTPG"
     gene            2342..2719
                     /locus_tag="VLD58_12025"
     CDS             2342..2719
                     /locus_tag="VLD58_12025"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSB55081.1"
                     /translation="MAPDPATLDLLTALAESTRLRIVNCLAAAPLFVSELQEILEIPQ
                     PTVSRHLRVLRDAGLVRDTPIAQYVLYRLRRPPEPQGRVLSAVLDAAQQERMLVGERA
                     DAMARSRRHARHRIALDTEERPA"
     gene            2716..3423
                     /locus_tag="VLD58_12030"
     CDS             2716..3423
                     /locus_tag="VLD58_12030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB55082.1"
                     /translation="MSHRILVVDDEPDITALVAYHLAKAGYRVSTAANGPDALKAARE
                     EKPDIVILDVMLPGVSGYDVLAELRRRDETREVGVILLTARREEPDRIRGLSLGADDY
                     LTKPFSPAELALRVNGLLRRLSAPSVSSGSTLAAGPISIERSGHRVSVEGKEIELTAT
                     EYKLLLTLVERRGRVQTRPQLLETVWEAQPDIQTRTVDMHVQRLRTKLGPAGELIETV
                     RGFGYRFRSAERGSRRA"
     gene            3420..5150
                     /locus_tag="VLD58_12035"
     CDS             3420..5150
                     /locus_tag="VLD58_12035"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB55083.1"
                     /translation="MNFAGRLILGILAVIVVVIVTLVTSAELSLRQKLEDDIRNTLER
                     EARLIAQALPADSLAWQAAVEDLARTSQLRVTLIDREGRVLAESDEPAEAVPRIENHK
                     ARPEVAAAIEGKVGSSRRVSATVNRPLLYVAIPGGPGVVRVAAPLLGVDEIIRRTQTS
                     IIDAAGIALLLGLLLAFVAGRSVARPLNGIREAARAIADGATPHFPHSGVPDIDGVVR
                     SLRDMHVQLDERFNQIKRERAESAALVESMAEGVIASDDRGHIVTANAAARRLLGYDP
                     DENLPALDQLFRVKAAREMVDALLAGRTAPERELELDGHTILLSGRALAHGGALLVLH
                     DVTDLRRLEIVRRDFVANVSHELKTPLTSISGYAETLVNDPPDAEMSRRFLNVILANA
                     RRMQRLVDGLLDLSRIESGGWRPEPESLEATTVAREVWALMADRAAQREVGFDIQIEP
                     GAERVHADPDAFRQVLTNLLDNALRYTPAGGKITLRMRREAEGIRVGVKDTGAGITSE
                     HLGRIFERFYRADSARSRDEGGTGLGLAIVKHLVEAHDGRVEARSEVGKGTEIISWFP
                     DPTGAVVAKL"
     gene            5314..5736
                     /locus_tag="VLD58_12040"
     CDS             5314..5736
                     /locus_tag="VLD58_12040"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HSB55084.1"
                     /translation="MITHAGGATATVAFCLVLLLIPATRHLGVVAGSANIISHLLVQG
                     LKRTVVRQRPTITLPEIVALAPFPDHFSFPSGHACASMAVAMAVLLDTPLAGIPLLVV
                     ALGVGASRFYLRVHYLTDVVVGHALGATTAVLLTQSLS"
     gene            complement(5661..6833)
                     /locus_tag="VLD58_12045"
     CDS             complement(5661..6833)
                     /locus_tag="VLD58_12045"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HSB55085.1"
                     /translation="MHITFATDTFLPEINGVTTVLAQMRDGLRARGHQVRVLAPDYGT
                     PLPDESGILRLGAVPAPGYQQVRLSWPWFRGLSRWLDGGHPDVIHAVTEGPLGLYGRS
                     YARRRGIPLVTSFHTDFPRYAGHYLGRFAVRPTQAYLRYFHNAARLTQTPSEVTRDEL
                     HRLGIPRAEVWGRGVDTSWFRPSRRSESRRTELGATTGKTLILHVGRLALEKSVDTLV
                     GAFTEAREQLGDRGVFCVAGDGPKAAWVRQALPWARHLGFLDREVLADLFADADLFVF
                     PSATETCGLVALEALASGVPVIGANAGGVKENLREGLTGMLVTPRDARGFARAITLLA
                     VDPDQRRAMGEAARAFAVGRDWARELDQLEAAYERLCVRRTAVVAPSAWPTTTSVR"
     gene            7015..7851
                     /locus_tag="VLD58_12050"
     CDS             7015..7851
                     /locus_tag="VLD58_12050"
                     /inference="COORDINATES: protein motif:HMM:NF013811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HSB55086.1"
                     /translation="MRARVKKMILVVIDGLRPDAITPEHLPVLHGLLRRGWRAGTAVT
                     VRPSVTVAALTSLAAGVSPERHGLTNASLQSMGKIRGLKPLPQELRRLGVDTTVFTSQ
                     LSGSARWVAGALLRLGGVTRLLPTPPAPGVMLDGAMAHIERNPSPELVVLYLNDADVA
                     GHAWGWMSPAYLQAARTIDLALERLEQVAEDPDTLVILTADHGGGGVLPQDHDHPHPV
                     NEGIPLGMVGGRVIPGLVSPDPVRLLDIPPTVLHGFGGTAPAEYEGRVLHEAFMTELV
                     WA"
     gene            7848..8015
                     /locus_tag="VLD58_12055"
     CDS             7848..8015
                     /locus_tag="VLD58_12055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55087.1"
                     /translation="MKQKPAAGSGTTGSSGSGGNRPSSAEAAQAGLAALLASEDLLFR
                     DPFADFTPSAR"
     gene            8161..9237
                     /locus_tag="VLD58_12060"
     CDS             8161..9237
                     /locus_tag="VLD58_12060"
                     /inference="COORDINATES: protein motif:HMM:NF019042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HSB55088.1"
                     /translation="MSRSALGASLIATLAVAVATATPLLAQSPTVTISGVGYAQYLYQ
                     LKEDSSFSGNGHQNNFDVTRAYLNAVGKFPAGLTTRVTIDLDGRKAASNQLSIRLKYA
                     YLAWTPEKSPLTFKLGEIHTPLLDWEEALWDYRMQGTMALERAGYVSSSDFGAGIDGN
                     WGYDKVNMQVGVYNGENYSGAPGDQRKDLMGRVSVKLMNTDMAGRGGGLRVSAYAQYG
                     KPTTGGRRERYLGMVSYKSKMLTLAGEIAATRDSVTGGTFSGTAVTPAANKTGRIYSV
                     FGVLNVPQSKWGVIGRVDITDPQTGDATNDRLTRIIGGVSYQVNPNLRLLADVDNVSR
                     QGGNYANGFNATRSTGYFQAQFTF"
     gene            9267..10313
                     /gene="pstS"
                     /locus_tag="VLD58_12065"
     CDS             9267..10313
                     /gene="pstS"
                     /locus_tag="VLD58_12065"
                     /inference="COORDINATES: protein motif:HMM:NF008171.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HSB55089.1"
                     /translation="MQRITRALALLAGAVLATPAVAQVALTGAGATFPNPIYSKWFDA
                     YNKKTGVQINYQSVGSGAGIRQYTEGTVDFGASDGPMSNDQMNAVQGQVYHIPTVMGA
                     VVLTWNLPALGDTQLKLDGAAIADIFLGHITKWNDKRISSLNPGVNLPNADIIVVHRS
                     DGSGTSYIFTDYLSKVSGEWKEKVGYNTSVNWPVGLGGKGNEGVTQQVKQVEGTIGYV
                     ELIYAVANKLPYAAVKNQAGSYVQPSLQSVTAAAASAKFDKNTDFRVSITNAPGKDSY
                     PISSFTWLLVHPDLKDAGKAKAIKDFLSWMITPEAQQMATGLQYAALPAEVTKLITDR
                     LKTLKAGGKLIAMN"
BASE COUNT         1759 a         3553 c         3561 g         1621 t
ORIGIN      
        1 ttccccggag tacagtcggt tgcgccgagg gtgaagacat cgccctcgat gaccttctcg
       61 ctcaccgcga gctggtaggt gcgcttgcgg tcgatcgatt tgccacccgg caggcggacc
      121 ttcttcaccc gctccatcgg cttggccttg gggtcgaact cgacggtgac accggccact
      181 tcgcagcagg gcgactcgga ctccaccacg tgctcgagga tgtcctcgag ctcggcgccg
      241 gtcaccggga tcaccatcat cctgctccga ccgggaaggg ccgcggcgat ctgctgggcg
      301 gtcagcggac cggcgggaag gcggtcgccc acctcgtcgc ttcgaacgat cgagaggtcg
      361 gcccggagcg cgttcatgta ggcatccgcc accaggcggg tcaggttctt tccggcaccc
      421 ggttcggccg ggagcttcat cgtcaccagc gtgacacggg cagcggcctc ggccttgtcc
      481 tgctcccgca ggatcgaatc gcgccgggcc agctccttgg cgttgggccc caccggcagg
      541 ttgagcggcg gcggggtttc ggccacgggc tccggcccag ccaccacgtc cttcacgaag
      601 atcgagcgcg ccttcttcgc gagctcggcg ggcgcgagcg accagtcggc cccattgaag
      661 tcggtgcgga gcagtgtgtg ccgccggcgg atatcggccg ccagcaggtc acggatgaat
      721 tcgcccttgt cgtacaccac cggagcgccg gccagcatgg cgaagttgcc cagcccgagc
      781 tgacgcgaac tcggcagcgc cagggtgaag gaatcggccg gggcgacggg acggcccttc
      841 acctcgaggc gggtgatgcg ctgccccatg gggcggctga ggtcgatggt gtaggccgcg
      901 ccgccgatca cgtcatagtt ggccggcggc acgaagcgat tggtggcgac caggccggtg
      961 gaatcggcgt agaagtagcg ggcggactgt tcgaggtacg ccttgagctg agcgcccgaa
     1021 atgcggatcg cgcgcagggt gttctcggcg ggatagatcc ggaatacctc gccagcggtg
     1081 atgtcaccct cgtccagcat ggccttggta tcgggcaccg aggccgcgga cagatcggcg
     1141 cgggcggtgc ggcgctggac ctcgtggatg aagcgcatcg cgggcacgtc ttccacccgg
     1201 ccggcggcca tggcaagccg ccgctcgctc tcgcccaccc gggttgcgac ccagccgagc
     1261 acggcgcgat ggggatcgag cagccggcgc tggacccgct ccgacggacg gacatcctcg
     1321 agcggaatcc gctcggcctt gacccgcgcg agctcgagac cggcgccctt gggaacgaag
     1381 ctcaggtaca ccaccgcgag cgagcggcct tcgggccggg gctgcacgaa atgcaccccg
     1441 cctatcacgg tgtcgaccac atccttgtgc gagtggccca ccacgacaag gtcgggcttg
     1501 agcgcaccag ccgcgatccg ggcactcacg ttctccccgc cgacgccggt ggtgtcgtag
     1561 ctcgccccac catcgatccc gctgtgagag agtaccacgg tgaagtcggc atcctggcgc
     1621 atctcccgca gcaccgcgtc gacccgcggc tcgatccggt ccactcgcat ccggcccttg
     1681 agcttgtcgc catccagcac catcgcggcc ggcgtggtga agccggtgat cgcgacccgg
     1741 accccattcc ggttcacgac gacatacgac ttgaagaaga gtgtgtcggc cgggaggacc
     1801 cggaggttgg cgctgacaaa cgggaaggag gcgcccgcga gcgcctgctg aaaacggtcg
     1861 accccgaagt cgaagtcatg atcgcccggc gtggcggcat cgtagcccat gaggttcatg
     1921 gcctcgatca ccggatgcgg gtcacgcctg gtctcgcgcc cgtaataggc ggcgaagatg
     1981 ctcccctgca gcgcgtcgcc cgcgtccacc accagcacct gtccgggata cttgagccgg
     2041 agcgaatcga ccacgctgac tgcgcggctc aatccccccg gccacgggct gttctggagg
     2101 tagtcccagt ccgtcgcata cccatgcaga tccgtggtcg cgaccagcac gacccggacg
     2161 gtatcggccg gcgcacccgc aagcgccagc agcaatggaa gtagtggcat ggcaacaata
     2221 tccgggcccg ggccggaccg gcgcaatggt gttggtcaca atcccgcaac gggccgtgat
     2281 cagaccgtca cattggcgcg cttgcgcctg ctggcggggc cgtttattcg ttttggcgaa
     2341 tatggcaccc gaccccgcca ccctcgacct gctcacggcc ctcgccgagt ccacccggct
     2401 ccggatcgtg aactgtctgg cggcggcccc gctcttcgtg tcggagctcc aggagatcct
     2461 ggagattcca cagcccacgg tctcgcgcca cctccgggtg ctgcgggacg ccggcctggt
     2521 ccgtgacacc cccatcgccc agtacgtgct ctatcgcctg cgccggcccc cggaaccgca
     2581 gggccgggta ctcagtgcgg tgctcgatgc cgcgcaacag gaacggatgc tggttgggga
     2641 gcgggcggac gccatggccc ggagccgccg gcacgcccgc caccgcattg ccttggatac
     2701 cgaggaacgg cccgcatgag tcatcgcatc ctggtggtcg acgacgagcc ggatatcacc
     2761 gcgctggtgg cctatcacct ggccaaggcg ggatatcggg tctccaccgc ggcgaacggt
     2821 cccgacgccc tcaaggctgc gcgcgaggag aagcccgaca tcgtgatcct cgacgtgatg
     2881 ctgccgggcg tctcgggcta cgatgtgctg gcggagctgc gccggcggga cgagacccgc
     2941 gaggtcggcg tgatcctgtt gaccgcgcgc cgggaggaac ccgaccggat ccgcggcctc
     3001 tccctcggcg ccgacgacta cctcaccaag ccgttctccc cggccgaact cgcgctgcgg
     3061 gtgaacggcc tgctgcggcg gctctcggct ccctcggtct cgagcgggtc gaccctggcg
     3121 gccgggccga tctcgatcga acggtcgggc caccgggtct cggtcgaggg gaaggagatc
     3181 gagctcaccg ccaccgagta caagctgctg ctcacgctgg tggagcggcg cgggcgggtg
     3241 cagacccggc cgcagctgct ggagacggtg tgggaagccc agcccgacat tcagacgcgg
     3301 accgtcgaca tgcatgtgca gcggctccgg accaagctgg gccccgccgg cgagctgatc
     3361 gagacggtcc ggggcttcgg ctaccgcttc cgctccgctg aacgggggag ccgccgcgca
     3421 tgaacttcgc gggccgcctg atcctcggaa tcctcgcggt tatcgtcgtc gtcatcgtga
     3481 ccctggtgac cagcgccgag ttgtcgctcc ggcagaagct ggaggacgac atccggaaca
     3541 cgctcgagcg cgaggcccgc ctgatcgcgc aggcgctccc ggccgattca ctggcctggc
     3601 aggccgcggt tgaggacctg gcccgcacca gtcagctccg ggtaacgctc atcgaccgcg
     3661 agggacgagt gctggccgag agcgatgagc cggcggaggc ggttccccgg atcgagaatc
     3721 acaaggctcg ccccgaagtg gcggccgcca tcgagggcaa ggtggggtcg agccgccggg
     3781 tgagcgcgac ggtgaaccgg ccgctcctgt atgtcgcgat tcccggcggg cccggggtgg
     3841 tgcgggtggc agcaccactg ctgggagtgg acgagatcat ccggcgaacc cagacctcga
     3901 tcatcgatgc ggccggcatc gcgctcctgc tgggattact gctggccttc gtggcgggac
     3961 ggtcggtcgc gcggccactc aacggcatcc gtgaagccgc acgggccatc gccgatggcg
     4021 ccacgccgca tttcccccac tcgggggtcc ccgacatcga tggggtggtc cgctcgctcc
     4081 gcgacatgca cgtgcagctc gacgagcgct tcaaccagat caagcgggaa cgggccgaat
     4141 cggccgcgct ggtggagtcg atggcagagg gggtcatcgc ctcggacgac cgggggcaca
     4201 tcgtcaccgc caacgcggcg gcacgccggc tcctgggcta cgatccggac gagaatctcc
     4261 ccgcgctcga ccagctgttc cgggtgaagg cagcgcggga gatggtcgac gcgctcctcg
     4321 ccggccgcac ggcgccggaa agggaactgg agctcgacgg ccacaccatt cttctctcgg
     4381 gccgggccct ggcgcacggc ggcgcgctgc tggtgctgca cgacgtcacc gatctccggc
     4441 gtctggagat cgtccggcgc gacttcgtgg ccaacgtctc gcacgaactc aagacgccgc
     4501 tcacctcgat ctccggttat gccgagacgc tggtgaatga cccgcccgac gccgagatga
     4561 gccgccggtt cctcaatgtg attctggcga atgcccggcg gatgcagcga ctggtggacg
     4621 ggctcctgga tctttcgcgg atcgaatcgg gaggatggag gccggagccg gaatcgctcg
     4681 aggcgaccac agtggcccgc gaagtctggg ccctcatggc cgatcgtgcg gcccagcgcg
     4741 aagtgggctt cgacatccag atcgagcccg gagccgaacg ggtccacgcc gatcccgatg
     4801 ccttccgcca ggtgctgacc aacctgctcg acaacgcgct ccgctacacg ccggcgggcg
     4861 gcaagatcac cctccggatg cggcgcgagg cggagggaat ccgcgtcggc gtgaaggaca
     4921 ccggcgcggg gatcaccagc gaacacctcg gccgcatctt cgagcgcttc taccgggccg
     4981 actccgcccg ctcacgcgac gaaggaggca ccggactcgg cctcgcgatc gtgaagcacc
     5041 tggtggaggc gcatgacggg cgggtcgagg cccggagcga ggtcggcaaa ggcaccgaaa
     5101 tcatctcctg gttcccggac ccgaccggag cggtcgtggc gaagttgtga caggaaggtg
     5161 cattgacggt gatcgcgggc tgcgatcatt gattcaaagg caccggagga aagactgaaa
     5221 gccttgtggc agcgggtcag cctgaccgac agaagggcaa tgatggcgat ggcggaccgg
     5281 gaggcgccgg tctggctgga ccgaggtttc cgcgtgataa ctcatgccgg cggggccacc
     5341 gcaacggtgg cgttctgcct ggtgttgctg ctgatcccgg ccacccgcca tctcggcgtg
     5401 gtggccggtt ccgcaaacat catctcccac ctgctggtac aggggctcaa gcggacggtg
     5461 gttcgccagc gaccgacgat cacgctgccc gagatcgtgg cactggcacc cttccccgac
     5521 catttctcgt tcccatcggg acacgcctgt gcttcgatgg ccgtggcgat ggcggtgctg
     5581 ctcgacacgc cgctcgcagg gattcccctg ctcgtggttg cactcggggt gggagcctcg
     5641 cggttctacc tccgggtcca ctacctcact gatgtggtgg tgggccacgc gctgggtgcc
     5701 acgaccgcag tcctcctcac acagagcctc tcgtaggctg cctcgagctg gtccagttcc
     5761 cgggcccagt cccgccccac cgcaaaggca cgcgccgctt cgcccatcgc gcgacgctga
     5821 tcaggatcca ccgcgaggag cgtgatcgcc cgggcgaacc cgcgggcatc gcgcggcgtc
     5881 acaagcattc ccgtgagacc ctcccgcagg ttctccttca ccccgccggc gttcgcgcca
     5941 atgaccggta cgcccgaagc cagtgcttcg agcgcgacca gaccgcaggt ctcggtggcc
     6001 gagggaaaga cgaacaggtc ggcatcggca aagagatcgg ccagcacctc gcgatcgaga
     6061 aagccgaggt gccgggccca gggaagtgcc tgacgaaccc aggccgcctt gggcccgtct
     6121 cccgcgacac agaacacccc gcgatcgccc agctgctccc gcgcctcggt gaatgcgcca
     6181 accagcgtat cgacgctctt ctcgagcgcg agccgtccca cgtgcaggat cagcgtcttg
     6241 ccggtggtgg cgccgagttc ggtgcgacgg ctctccgaac gccgggaggg gcggaaccag
     6301 gaggtgtcga ctccgcgtcc ccagacttcg gcccggggaa ttcccagccg gtgcaattcg
     6361 tcccgggtga cctcactcgg ggtctgcgtc aggcgggcgg cgttgtggaa gtagcgcagg
     6421 tacgcctggg tgggccgcac cgcgaatcgg ccgaggtagt gcccggcgta ccgggggaag
     6481 tcggtatgaa acgaggtgac cagaggaatc ccgcggcgac gggcgtaact ccgcccatag
     6541 aggccgagcg gaccctcggt gaccgcgtga atgacatcgg ggtggccgcc atcgagccaa
     6601 cgggagagac cgcggaacca gggccaggag agccggacct gctggtatcc gggcgcaggc
     6661 acggcgccga gtcgcaggat gccggattca tccgggagcg gcgtgccgta gtccggcgcg
     6721 agtacccgca cctgatggcc gcgggcgcgc aggccatcgc gcatctgggc caggaccgtg
     6781 gtgacgccgt tgatctcagg caggaaggtg tcggtggcaa aggtgatgtg catggtctga
     6841 agcgtgcctc gcggcagtca cctcgccgtg acaggcgcgt cacggttctg caatcaacct
     6901 ccagctcctt gtggcgattg gggatcgatg tgtcgcagtc ggtatcaccg gatcattgaa
     6961 cggtgacatt gcggcggcac tgttcgcgca ccaacgggcc cgaggagacc ctacgtgaga
     7021 gcacgcgtca agaagatgat cctggtggtg atcgacggac tgcgtcccga tgccattact
     7081 cccgagcacc tgccggtcct gcatggcctg ctccggcggg gctggcgggc cgggacggca
     7141 gtgacggtgc ggcccagtgt gacggtcgcg gcactcacct cgctggcggc cggcgtgtcg
     7201 cctgagaggc atgggctgac caatgcgtct cttcagagca tggggaagat ccggggcctc
     7261 aagccgctcc ctcaggagct ccggcggctt ggcgtcgata ccaccgtgtt cacctcgcaa
     7321 ctctcgggat ctgcgagatg ggtggcggga gccctgcttc ggttaggcgg ggtgaccagg
     7381 ctgcttccca cgcctcccgc gccaggtgtc atgctggatg gggccatggc tcatatcgag
     7441 aggaacccga gccccgagct cgtcgttctc tacctgaacg atgcagacgt ggcggggcac
     7501 gcctggggct ggatgagccc ggcctatctc caggcagcgc gtacgatcga cctggcgctg
     7561 gagcggttgg agcaggtggc ggaggatccc gacacgctgg tgatcctgac ggcggaccat
     7621 ggtggaggcg gggtgctgcc ccaggaccac gatcatccgc atccggtcaa cgaagggatc
     7681 ccgttaggga tggtgggtgg tcgggttatc cccgggctgg tgtcgccgga ccccgtgcgg
     7741 ttgctggaca taccgccgac ggtgctgcac gggtttggtg gcacggcgcc tgcggaatat
     7801 gaaggacgcg tactccacga agcctttatg acggagctgg tatgggcatg aagcagaaac
     7861 ccgccgcagg gagcgggacc acggggtcgt cagggagcgg agggaaccga ccgtcctccg
     7921 ccgaggccgc ccaggcaggg ctggccgcgc tgctcgcctc cgaagacctc ctcttccggg
     7981 atcccttcgc cgatttcacg ccgagcgccc gctaaatcgc gctcggtgtg cctctcacgg
     8041 gggcacgtta cacctctgtt acttccggtg ggagcgttcg tgacgtgaat ccgcgttcgt
     8101 tgggccgtcg gaaggaggca cctccgcctc tttccgcgac tcactcgacg aggacgtctc
     8161 atgtctcgca gtgccctggg cgcttcgctg atcgctaccc tcgcggtggc cgtcgcgacc
     8221 gccacccccc tgctggccca gtcccccacg gtcaccatca gcggcgtcgg atacgcccag
     8281 tacctgtacc agctgaagga agactcgagc ttcagcggga acggacacca gaacaacttc
     8341 gatgtcaccc gcgcctatct gaacgcggtg ggcaagtttc cggctggcct caccacccgg
     8401 gtgaccatcg acctggacgg ccgcaaggcc gcgagcaacc agctctcgat ccgcctcaag
     8461 tacgcctacc tcgcatggac ccccgagaag agcccactga ccttcaagct gggtgagatc
     8521 cacaccccgc tgctcgactg ggaagaggcg ctctgggact accggatgca gggcaccatg
     8581 gcgctcgagc gggccgggta cgtctcctcg tcggacttcg gcgcggggat cgacggcaac
     8641 tggggctacg acaaggtcaa catgcaggtg ggcgtctaca acggcgagaa ctacagcggc
     8701 gcaccgggcg accagcggaa ggacctgatg ggccgggtgt cggtgaaact catgaacacc
     8761 gacatggcgg gccggggggg cgggctccgg gtgtccgcct atgcccagta cggcaagccc
     8821 acgaccggcg ggcggcggga gcgttacctc gggatggtgt cgtacaagtc gaagatgctg
     8881 accctggccg gtgagatcgc ggccacccgg gacagcgtca ccggcgggac cttcagcggc
     8941 acggccgtca cgcccgcggc caacaagacc ggcaggatct acagcgtctt cggcgtcctc
     9001 aacgtgcccc agagcaagtg gggcgtcatc ggccgggtgg acatcaccga cccccagacc
     9061 ggcgatgcca ccaatgatcg ccttacccga atcatcggcg gcgtgagcta ccaggtgaac
     9121 cccaacctgc gcctcctcgc cgacgtcgac aacgtctctc gccagggtgg caactacgcc
     9181 aacggcttca acgccacccg gtcgaccggc tacttccagg cccagttcac cttctgacca
     9241 gatccatgtc tcgagggaga ttcccaatgc agcgtatcac ccgggctctt gccctgcttg
     9301 ccggcgccgt gctggccacc cccgcggtgg cccaggtggc cctcaccggg gccggcgcca
     9361 cgttccccaa tccgatctac agcaagtggt tcgacgccta caacaagaag accggcgtcc
     9421 agatcaacta ccagtcggtg ggctcgggcg cgggcatccg ccagtacacc gagggcacgg
     9481 tcgacttcgg cgcgtcggac ggcccgatga gcaacgacca gatgaacgcc gtgcagggcc
     9541 aggtctacca catcccgacc gtgatgggcg ccgtggtgct gacctggaac ctgcccgcgc
     9601 tgggcgacac ccagctcaag ctcgatggcg ccgcgatcgc ggacatcttc ctgggccaca
     9661 tcaccaagtg gaatgacaag cggatcagct cgctcaatcc gggcgtcaac ctccccaacg
     9721 ccgacatcat cgtggtccac cgctcggacg ggtccggcac cagctacatc ttcaccgact
     9781 acctgagcaa ggtctcggga gagtggaagg agaaggtggg ctacaacacc tcggtgaact
     9841 ggccggtcgg gctgggtggc aagggcaacg agggcgtgac ccagcaggtg aagcaggtcg
     9901 agggcaccat cgggtacgtc gagctgatct acgccgtggc caacaagctg ccctacgcgg
     9961 cggtgaagaa ccaggccggg agctatgtcc agccgtcgct ccagagcgtg accgccgccg
    10021 cggcgtcggc caagttcgac aagaacaccg acttccgggt ttcgatcacc aatgcgccgg
    10081 gcaaggactc gtacccgatt tcatccttca cctggctgct ggtccatccc gacctgaagg
    10141 acgcgggcaa ggccaaggcg ataaaggact tcctgagctg gatgatcacc cccgaggcgc
    10201 agcagatggc gaccgggctc cagtacgccg ccctgccggc agaggtgacc aaattgatca
    10261 ccgatcggct caagacgctc aaggccggcg ggaagctcat cgccatgaac tgaggggcga
    10321 aactccgcag gccgacggcg ccgccggggg ttgaattccc tggcggcgcc ttcctttagg
    10381 ggccgggggc gacgtcccgc tgctcgtgac ccgtccgtta cacatccgtg accgtccctg
    10441 atcctgcccc cggtacactc ccgccatgac ttcaaccacg gtggacccgg cttc
//
LOCUS       DATIFF010000824         3146 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_103925, whole genome shotgun sequence.
ACCESSION   DATIFF010000824 DATIFF010000000
VERSION     DATIFF010000824.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3146
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103925"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(12..1457)
                     /locus_tag="VLD58_12070"
     CDS             complement(12..1457)
                     /locus_tag="VLD58_12070"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSB55090.1"
                     /translation="MMTKSAAVAAPRLLLVDDDEEACRLLAEVLGRESYHVSRALSAR
                     EALKLVDEDGPFDAVLTDLRMPEASGLDLLADLRKRDPEALVLVLTAFGDGAGAAEAI
                     RAGAYDFISKPYDLAELRQTLSRALERRQLVADRQSGAMPLPTSAGKPTPTGGLVGHS
                     PAIIKVMKQVARVAPTHATVLITGETGTGKELVARTIHHFSERADKRMVAVNCSALAE
                     GLLESELFGHVRGAFTGAVSNRAGLFREADHGTVFLDEIGDISPGLQARLLRVLQEQE
                     IVPVGAEQPIKVDVRVIAATHRDLPTLVQERKFREDLYYRLNVVTIHLPPLRERRQDI
                     PLLIDHFLTTLAVRHGRGPVAMDPGAQALLLAHDWPGNVRELENVLERALVLAEIDVI
                     GPEHLPESVRSARAEPAVSGENDMDNMETTTTAEPETELVSLDELDRRHVFRVLAAMG
                     GNREDSARILGISRRTLTRMIQRWGWKPGAK"
     gene            complement(1454..2911)
                     /locus_tag="VLD58_12075"
     CDS             complement(1454..2911)
                     /locus_tag="VLD58_12075"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB55091.1"
                     /translation="MKLTLSRRMALLTAVLALLLVTGSTEIGLRLSERARLDDLEVES
                     VDLATTLADYLTRIAPTGEVSALFVGLGGWSRRHITETTAIVFIIDGDQLVPVAASDS
                     TFDLAPSEFDRRALIEGRPIAWFRADATPPSEEVAVPLGGRDPYGVLHIRVSTGRLTE
                     WARTERRRALLLALAAAILLAIGVALLSMRWVGRPLAALSGAMAGAHGGAEGSPEAKE
                     VGPPEFRLVARKYNELRNALVQRQRESEARAALLSLEERARNYDRLAQAEEIAAAFAH
                     EIGTPLNTMNGHLQLMKEDLRLAGDREGQERVGLLLAQLDRVAKIVRGRLERGGWPAP
                     ARDSVELEVVAQRMLRFLQPSLDAAGVRPVLVQRSNGTRVVARGDSDLVEQILLNLLK
                     NAIEALPPGGQITVTTGAGDEGAFIRIADNGPGLSAETRSQLFQPFVTSKAQGTGLGL
                     AVSRRLARTLGGELSLVPAERGTCWQLTLPLDEAA"
     gene            2963..>3146
                     /locus_tag="VLD58_12080"
     CDS             2963..>3146
                     /locus_tag="VLD58_12080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55092.1"
                     /translation="MNPLEHFLSQHGLVALLLLATVEGDLSILVGGVLAHLGILPLPG
                     VILAGAVGNLAGDVGWF"
BASE COUNT          481 a         1118 c         1041 g          506 t
ORIGIN      
        1 tcgacccaag cctatttcgc tcccggcttc cacccccacc gctggatcat ccgcgtcagg
       61 gtccggcgcg aaattcccag aattctggcg gagtcttccc ggttcccgcc catcgccgcg
      121 agtacccgga agacgtgacg gcgatcgagc tcgtcgaggc tcaccagttc ggtttccggc
      181 tcggcagtgg tcgtcgtttc catgttgtcc atgtcattct ctcccgagac cgccggctcg
      241 gcccgcgcgc tgcggacgct ctccggcaga tgttctggcc cgatgacatc gatctccgcc
      301 agcaccagcg cccgctccag cacgttctcc agttcccgca cattccccgg ccaatcgtgc
      361 gccagcagca aggcctgcgc gccggggtcc atcgccaccg ggccgcgccc atgccgcacc
      421 gccagagtgg tgaggaaatg atcgatcagg agcgggatgt cctgccgccg ttcccggagt
      481 ggcggcaagt ggatcgtcac cacgttgagg cggtagtaga ggtcctcccg gaacttccgc
      541 tcctgcacca gggtggggag atcccggtgg gtcgcggcga tcacccgcac atcgaccttg
      601 atgggttgct ccgcaccgac cggcacgatc tcctgctcct gcagcacccg gaggagccgg
      661 gcctgcagtc cgggagatat gtccccgatc tcgtcgagga agacggtgcc atggtcggcc
      721 tcgcgaaaaa ggccggcccg gttgctcacc gccccggtga acgcgccccg cacgtgaccg
      781 aagagctcgc tttcgaggag cccctccgcc agcgccgagc agttcacggc gaccatccgc
      841 ttgtcagccc gctccgagaa atggtggatc gtgcgggcga ccagctcctt gccggtgccg
      901 gtctcgccgg tgatgagcac cgtcgcgtgg gtcggcgcca cccgggccac ctgcttcatc
      961 accttgatga tcgcggggct gtggcccacc agcccgccgg tgggcgtggg cttgcccgcg
     1021 gaggtgggga gaggcatggc ccccgattgc cggtcggcga cgagctgccg ccgttccagc
     1081 gcccgtgaga gcgtctggcg cagctcggcc aggtcgtacg gcttgctgat gaagtcgtag
     1141 gctcccgcgc ggatcgcttc ggcggcgccg gccccgtcac cgaaggccgt gagcacgagc
     1201 accagcgcct cgggatcccg cttgcggaga tccgcgagga ggtcgagccc gctcgcctcc
     1261 ggcatccgga gatcggtgag cacggcgtcg aaggggccgt cctcatcgac cagcttgagc
     1321 gcctcccggg ccgagagggc ccgcgacacg tgatacgact cgcgccccaa cacctccgcg
     1381 aggaggcggc aggcttcttc gtcgtcatcg acgagcagca ggcgaggggc ggcgacagca
     1441 gcggatttcg tcatcatgca gcctcatcta gcggcagcgt cagctgccag caggtaccac
     1501 gttccgcggg aaccagcgac agctcgccac ccagggtgcg cgccagccgc cggctcaccg
     1561 cgaggccaag gcccgtgccc tgcgccttgg aggtgacgaa cggctggaac agctggctcc
     1621 gcgtttcggc ggagagaccg gggccgttgt cggcgatgcg gatgaatgct ccttcatcgc
     1681 cggcgccggt cgtcaccgtg atctggcctc cggggggcag ggcctcgatc gcattcttga
     1741 gcaggttgag caggatctgt tcaaccagat cgctgtcccc gcgggccacc accctggtgc
     1801 cgttactcct ctggaccagc accggccgta ccccggcggc atccagcgac ggctggagga
     1861 acctgagcat gcgctgggcc acgacctcga gctccaccga atcgcgcgcc ggtgcgggcc
     1921 agccaccccg ctccagccgg cctcgaacga tcttcgccac ccggtccagc tgagccagca
     1981 gcagcccaac cctctcctgg ccctcgcggt caccagccag ccggagatct tccttcatca
     2041 gctggaggtg accgttcatc gtattgagcg gggtaccgat ctcgtgggcg aaggcggccg
     2101 caatctcttc cgcctgcgcc agccggtcgt agttccgggc ccgctcctcg agggagagca
     2161 gggcggccct ggcctcgctt tcccgctggc gctgcaccag ggcattgcgg agctcgttgt
     2221 acttccgggc caccagccgg aactccggag gccccacctc cttggcctcc ggcgacccct
     2281 cggctccacc gtgggcgcca gccatggcgc cgctcagggc ggccagcggc cgtccgaccc
     2341 agcgcatgct caggagtgca acccctatgg ctaaaagaat cgcggcggcc agcgcgagta
     2401 acaacgctcg ccgccgttcg gtgcgggccc actcggtcag ccggccggtg gagacccgga
     2461 tgtggagaac tccgtaagga tcccggcccc ccagtggcac cgctacttcc tccgagggcg
     2521 gggtcgcgtc agcccggaac caggcaatcg gccggccttc gatgagggca cggcggtcga
     2581 actcggaagg ggcaaggtcg aaggtgctgt cgctcgccgc gactggaacc agctggtccc
     2641 catcaattat gaagacaatc gccgtggtct cggtgatgtg ccgccgggac cacccgccaa
     2701 gccccacgaa cagcgccgac acctcgccgg tcggggcaat gcgggtgagg tagtcggcga
     2761 gcgtggtggc caggtcgacc gactcgactt cgagatcgtc gagccgggcg cgctccgaca
     2821 gccgaagtcc gatttcggtg gacccggtga ccaggagcag tgccagcacc gcagtgagca
     2881 gtgccatccg gcgggagagt gtgagtttca tcgcgcggag aggggtatac ttggggccgt
     2941 ccggcctgtc aattcacgtg ccatgaatcc gctcgaacac tttctctccc agcacggcct
     3001 ggtcgccctg cttctactcg ccaccgtcga aggcgatctc agcatcctcg tcgggggggt
     3061 gctggctcac ctgggcatcc tgccgctccc gggcgtcatc ctcgcgggcg cggtagggaa
     3121 tctcgcgggc gacgtgggct ggttcg
//
LOCUS       DATIFF010000825         3271 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2104070, whole genome shotgun sequence.
ACCESSION   DATIFF010000825 DATIFF010000000
VERSION     DATIFF010000825.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3271
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2104070"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..632
                     /locus_tag="VLD58_12085"
     CDS             <1..632
                     /locus_tag="VLD58_12085"
                     /inference="COORDINATES: protein motif:HMM:NF014625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PIG-L deacetylase family protein"
                     /protein_id="HSB55093.1"
                     /translation="GGALKVLCLGAHSDDVEIGCGGAMLDLLRTRPKTQVRWVVFSAS
                     GLRAREAYQSARRFLGPRAAESVILHEFRDGFFPAEFTQVKEAFQAVARGFEPDLVFT
                     HRREDRHQDHRTVSDLTWNHFRNQVVLEYEIPKWDGDLGSPNCFIPLSASAMRRKVDL
                     LMKGFATQRSKDWFDEDTFRGLARLRGVECRAPSGYAEAFYSRKVALAW"
     gene            complement(643..1827)
                     /gene="lhgO"
                     /locus_tag="VLD58_12090"
     CDS             complement(643..1827)
                     /gene="lhgO"
                     /locus_tag="VLD58_12090"
                     /EC_number="1.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-2-hydroxyglutarate oxidase"
                     /protein_id="HSB55094.1"
                     /translation="MQDVIVIGGGAVGMATALSLAETHGQRVLVLEAEARLASHQTGH
                     NSGVIHSGLYYKPGSLKATLCRGGLDAMYRFCEEESIPHRRCGKLVVAVREDELPRLK
                     TLEERGIANGVTLKRLQAAEIRDYEPEITGIAGLWVEETGVVHYPTVVEAMAKKIANR
                     GGEVRTSARVTGIRRDGNAHVVETAAGEFRGTRLVNCGGLQCDRITRMAGIEPGVRIV
                     PFRGEYYVLKAERAHLVKGLIYPVPDPALPFLGVHFTRGIDDVVEAGPNAVLAMRREG
                     YTWKDISLRDIADWAAFPGFWKMARVQWRNGLSEVHRSLSRARFLQSLQALLPALTDG
                     DITPGGSGVRAQAVDQNGKLLDDFHLQVSPGMVHVLNAPSPAATASLAIGGVVAKRLM
                     ES"
     gene            1908..3014
                     /locus_tag="VLD58_12095"
     CDS             1908..3014
                     /locus_tag="VLD58_12095"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB55095.1"
                     /translation="MKLADRTIRALHIFTPARAGGLESVVEMLLPGLAQRGVAVAASA
                     VIGAGEAEPPCLGVLRAAGLPVEVHRLGARAYGSELRAHRAIIAGFHANLVHTHGYRA
                     DVLGGLAAGPQLPRVATVHGFTGGDWKNRLYEWLQVRAYRRFDGVVAVSRLLRDQLQR
                     RGVGAGRLELIPNAFQAQPLASRAEARAALGLRADGLIIGWVGRFSREKAPDLFLRAA
                     AAIPGARFALVGDGPEREALQVLANQLGIAGRVDWPGLVAGAGRYYRAFDAFVLSSRT
                     EGTPIALFEAMAAQVPVVATAVGGVPEVIDRATGHLVPPEQPTALAEAIGAILAEPAA
                     ATALAANARQKVDRDYALLPWIDRYRELYARVLG"
     gene            3011..>3271
                     /locus_tag="VLD58_12100"
     CDS             3011..>3271
                     /locus_tag="VLD58_12100"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB55096.1"
                     /translation="MIETVALGLVLLPPGLMLYAYGLYPGLVRAVGWLRPAAPTPGDP
                     PEWPMISIVAPAYNEEKAIARLIESLLAIDYPADRRQILILSD"
BASE COUNT          479 a         1090 c         1135 g          567 t
ORIGIN      
        1 ggggcggagc gctcaaggtg ctctgtctcg gggcccattc cgacgatgtc gaaatcggct
       61 gcggcggcgc gatgctggat ctgctccgca cccggcccaa gacccaggtc cgctgggtgg
      121 tgttcagcgc ctcgggtctc cgcgccaggg aggcctacca gagcgccaga cggttcctcg
      181 gcccccgcgc cgccgagtcg gtgattctcc acgaattccg tgacgggttc ttcccggccg
      241 agttcaccca ggtgaaagag gccttccagg ccgttgcccg tggtttcgag cccgacctgg
      301 tattcaccca ccggcgcgaa gaccggcacc aggaccatcg cacggtgtcg gatctcacct
      361 ggaaccactt ccgcaatcag gtggtgctgg agtacgagat tcccaagtgg gatggcgacc
      421 tgggctcgcc caactgcttc atccccctct cggcctcggc gatgcgccgc aaggtggacc
      481 tgctgatgaa ggggttcgcg acccagcgga gcaaggactg gtttgacgaa gataccttcc
      541 gcgggctcgc ccggctgcgc ggtgtggaat gccgcgcacc gagcggatat gccgaggcct
      601 tctacagccg caaggtggcg ctggcctggt agccgacgcc gctcagctct ccatcagacg
      661 cttggctacc acacccccga tcgccagcga ggccgttgcc gccggtgagg gggcgttgag
      721 cacatgcacc atcccgggcg agacctgaag gtggaagtcg tcgagcagct tgccgttctg
      781 gtccacggcc tgggcccgga cgccactgcc gcccggtgtg atgtccccgt cggtgagcgc
      841 cggcagcagc gcctgcagcg actggaggaa acgggcccgg ctgagcgagc gatgcacctc
      901 gctgagcccg ttgcgccact ggactcgcgc catcttccag aagccgggga atgccgccca
      961 gtccgcgatg tcgcgaagcg agatgtcttt ccaggtgtac ccctcgcgcc gcatcgccag
     1021 gacggcgttg ggcccggctt ctaccacatc gtcgattccg cgagtgaagt ggacgccgag
     1081 gaagggaagg gccgggtcgg gaacggggta gatcagcccc ttcacgaggt gagcccgctc
     1141 ggccttgagc acgtagtact cgccccggaa cggcacgatc cgcacacctg gttcgatgcc
     1201 ggccatgcgg gtgatgcggt cgcactggag cccgccgcag ttgaccagac gggtgccccg
     1261 gaattctccc gcggcggtct cgacgacatg ggcgttgccg tcgcggcgga tcccggtgac
     1321 acgcgcgctg gtgcggacct cgccgccccg gttggcgatc ttcttcgcca tggcctccac
     1381 cacggtgggg tagtgcacca ccccggtctc ctcgacccag aggcccgcga tgccggtaat
     1441 ctcgggttcg tagtcccgga tctcggcggc ctggagccgc ttgagcgtga cgccattggc
     1501 aatgccgcgc tcctcgagag tcttgagccg cggcagctcg tcctcgcgca ccgcgaccac
     1561 cagcttgccg cagcgacgat ggggaatgct ctcctcctcg cagaagcggt acatcgcgtc
     1621 gaggccgccg cggcagaggg ttgccttgag cgagccgggc ttgtagtaga ggcccgagtg
     1681 gatgacgccg ctgttgtggc cggtctggtg gctggcgaga cgcgcttcgg cctcgagcac
     1741 cagcacccgc tggccgtggg tctcggcgag ggaaagcgcg gtggccatgc cgacggcgcc
     1801 gccaccgatg acgatcacat cctgcattgg tttgacctcg gggagtgagc gcgaataccc
     1861 ttggctgaga gcaggaaggg tgccaaggtc gcgggcaaca cgggagggtg aagctggccg
     1921 acaggactat ccgagcgctt catatattca cccccgcgcg ggccggcggt ctcgagagtg
     1981 tggtcgagat gctgctgccc gggctggccc agcgcggcgt cgcggttgcc gcctccgctg
     2041 tcattggcgc tggggaagcc gagccgcctt gtctcggggt gctgcgggct gccggcctcc
     2101 cggtggaggt gcatcgcctc ggtgctcgcg cctacggaag cgaactgcgt gcccatcgcg
     2161 cgatcatcgc gggcttccat gccaacctgg tgcatactca cggttaccgg gccgatgtgc
     2221 tgggtggcct cgcggcgggg ccacaactcc cgcgggtagc cacggtgcac ggattcaccg
     2281 ggggcgactg gaagaaccgg ttgtacgagt ggctccaggt gcgagcctat cgcaggttcg
     2341 acggtgtggt ggcggtctcc cgcctgctcc gtgatcagct gcagcgccgc ggggttggcg
     2401 ccggccggct cgagctgatt cccaacgcct tccaggctca accattggca agccgcgccg
     2461 aggctcgcgc cgcgctaggc ctgcgggccg acggtctcat cattggctgg gtgggacggt
     2521 tctcccggga gaaggctccc gacctgtttc tgcgcgcggc ggcagccatt ccgggagcgc
     2581 ggttcgcgct cgtgggagat ggaccggagc gcgaggctct ccaggttctg gcgaaccagc
     2641 tcggtatcgc tgggcgggtg gattggcccg gtctcgtggc cggtgccggc cggtactatc
     2701 gcgccttcga tgcctttgtg ctcagctccc gcaccgaggg gacaccgatc gccctgttcg
     2761 aagcgatggc ggctcaagtg ccggtcgtgg ccaccgccgt cggtggggtt ccggaagtca
     2821 tcgatcgagc gaccgggcac ctggtccctc cggagcagcc gactgctctg gccgaggcta
     2881 tcggcgcgat cctggcggaa cctgccgccg ccacggccct cgcggcgaat gcccgtcaga
     2941 aagtggaccg tgactacgcg ttgttgccct ggatcgaccg ctatcgtgag ctctatgccc
     3001 gggtactcgg atgattgaga cagtcgccct tggtctggtg ctgctgcctc ccggactgat
     3061 gttgtacgcc tatggactct acccgggcct ggtacgggcg gtgggctggc tgcgtcccgc
     3121 cgcaccgacg ccgggggatc ccccggaatg gccgatgatc agcatcgtgg cgccggccta
     3181 taacgaagag aaggccatcg cccgcctgat cgagagtctc cttgcgatcg actatcccgc
     3241 cgatcggcgc cagatcctga ttctctccga c
//
LOCUS       DATIFF010000826         6086 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_259031, whole genome shotgun sequence.
ACCESSION   DATIFF010000826 DATIFF010000000
VERSION     DATIFF010000826.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6086
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_259031"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..625)
                     /locus_tag="VLD58_12105"
     CDS             complement(<1..625)
                     /locus_tag="VLD58_12105"
                     /inference="COORDINATES: protein motif:HMM:TIGR00924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015333 - peptide:proton symporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide:H+ symporter"
                     /protein_id="HSB55097.1"
                     /translation="MTSPTAIPDAKGAGPAAHDSAFFGHPRGLSTLFFTEMWERFSYY
                     GMRAILILFMTASVAQGGLGFDASKGGLILGTYAGMVYLMSVPGGWLADKFLGLRRAV
                     LYGGVVIMAGHIALAVPSVPSFYLGLGLVIIGTGLLKPNISAMVGSLYTPEDHRRDAG
                     FSIYYMGINTGAFISPLVVGWLAQSPSWKGILSSMGIAPETSWHWGFG"
     gene            complement(659..1747)
                     /locus_tag="VLD58_12110"
     CDS             complement(659..1747)
                     /locus_tag="VLD58_12110"
                     /inference="COORDINATES: protein motif:HMM:NF018024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1028 domain-containing protein"
                     /protein_id="HSB55098.1"
                     /translation="MNVSLAAGTGMQRAVLRSWQRWLCLAAIPLYLSPFTFQVLAGQQ
                     QPLAPPPHFQKLAHTYSIVAYDPATGDLGVAVESKFPNVGGIVPWGQAGVGAVATQSL
                     GNTAYGEKGLELISQGATAEEALRIIMRSDTMLQDRQVGMVDAQGNSASFTGTRTFDW
                     AGGRVGGTPGGKLGGKGEVIVGKTYAAQANIMVSDQTVKNLAETFEKSTGSLADRLMA
                     ALKAGQAGGGDRRGMQSAALLVVRKNGGYLGANDRFIDIRVYDAKDPIAELERLLALH
                     KLHFFPSEAADLIAITPAIVRQLEPILLREPAGQPEKWLKAAQGKANDVFLAALRDFM
                     YWENYDVRVRMDGKIDRVVLDDILRKRQ"
     gene            complement(1744..2322)
                     /locus_tag="VLD58_12115"
     CDS             complement(1744..2322)
                     /locus_tag="VLD58_12115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55099.1"
                     /translation="MFEGLKARLERILADHTVPGEPRQRAALLHSALVEAKVAVAAMR
                     DALTATERQLASERKQLEDAERRGRLAAQIPDPETVQVAEQFAVRHRERVSILDKKLE
                     VQREELALTQREIDQMTAELKQLRTTGTPAGGTTAAQEAAWRDLESAGGVRPDTDVDG
                     DLLKHQISRQQMDAAVEAQLEHLKKKLGKERE"
     gene            2411..2896
                     /locus_tag="VLD58_12120"
     CDS             2411..2896
                     /locus_tag="VLD58_12120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55100.1"
                     /translation="MRRSLLVTGLALLSACGPPRGGGACGLTAIAGATMLLQEFGVAG
                     QTLGDPPTSLPPHLVARVAVGPAFDAVVGRTADSGWVIGIDGDVPPNIKPGFGVLVLD
                     PAGKARGVMVYESDPIQGAPTIGKLSIDTLMLPLIGIQLDPARVEDPRCPLFPDSVIQ
                     R"
     gene            2893..3648
                     /locus_tag="VLD58_12125"
     CDS             2893..3648
                     /locus_tag="VLD58_12125"
                     /inference="COORDINATES: protein motif:HMM:NF019342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HSB55101.1"
                     /translation="MSAPRIGITGTTRHYAGADRSTVNAAYVRSVIAGGGIPLVLPPL
                     LGDAYAAEILEVLDGLVLSGGEDVDPAHYGEEAHPTVRSNIDPLRDAQEMTLYRLARE
                     RALPVLAICRGIQLVNVALGGSLWQDLPSDKPDGLPHNQPDGRDARTHPVEVIPDSRL
                     ARALGATRFEVNSFHHQSIRELAPGLVVTARAPDGEIEGIESAPGDPWLLAVQWHPEE
                     FHAHDTAPDHGLFAALVTECRRRAGSESALSRS"
     gene            complement(3670..4350)
                     /locus_tag="VLD58_12130"
     CDS             complement(3670..4350)
                     /locus_tag="VLD58_12130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55102.1"
                     /translation="MILANMRGRLKAGDLQLVLLLLSRGSAVRRAALEQRLEREGPDP
                     LLDTPELAEGLLAVRTMMVPSEVLFFYVMVRHTLLQAGVAERDVADYLAALLLEFGQR
                     DRAQRVDWNDDQSHRYLVDIVSDLEASQGARRFRVLLHLGNYALWLAGLFPHYIEARR
                     IRRGGPDLTYYDSLGRRGYAMASDHELADRFQLEGVLSTAAERFPTIRSALNDLSERV
                     LFPSRELH"
     gene            4553..>6086
                     /locus_tag="VLD58_12135"
     CDS             4553..>6086
                     /locus_tag="VLD58_12135"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB55103.1"
                     /translation="MESANRDSGDAGFEPVLATILQSGQPLLRPVEGGTILGVPLLGR
                     RALLGAIALRLDRQAEDDDLRRLQAMGAIASVALEGARLVEMMDQSRQRWDEAIDAVS
                     LALCLLDRGGRVERVNRGFTELLSLTPVTAAGRPWQAVLPREWHEAVSRALLNRGTEE
                     ELRLRDQSIAVTAFQSSPGDPGRVVLLFENTTDRRLLQDRLLQSVKLSAIGQLIAGVA
                     HDLNNPLTSVVGFADFLAEAADVPPRIREPLRVIQQEAERASNIVKNLLSFARRQESR
                     QTASIQPILEATVGLFRNQLSGDEIALELELAPDLPTLELNPNQIQQVFVNLIQNAAQ
                     AIQSTGRPGTIRVITRRWMDGIAIEVTDDGPGMAPEHAAQAFEPFFTTKPDGQGTGLG
                     LSISQGIVKEHGGRITLATRFGAGSTFTIELPGRVRPSAEPIAPPPPPVTRPLEVLVL
                     DDEPHILHYIRSTLEAWGHTVATASDGQAGLERAIAEPFDLIISDLRMPRLGGREFYE
                     ALL"
BASE COUNT          953 a         2164 c         1967 g         1002 t
ORIGIN      
        1 ccccgaagcc ccagtgccag ctggtttcgg gcgcgatgcc catgctggag aggatcccct
       61 tccagctggg gctctgcgcc aaccatccca ccaccagggg cgagatgaag gctccggtgt
      121 tgatgcccat gtaatagatg gagaagcccg catcccgccg gtgatcctcc ggggtgtaca
      181 gcgagcccac catggcgctg atgttgggct tgaggagccc agtgccgatg atcaccaggc
      241 caaggccgag atagaacgag ggcaccgagg gaaccgcgag cgcgatgtgc cccgccatga
      301 tcaccacgcc gccgtagagc accgcccggc ggagccccag gaacttgtcg gccagccagc
      361 cacccggcac cgacatgagg tacaccatgc cggcgtaggt gcccagaatc aggccgccct
      421 tgctggcatc gaagcccagg ccgccctggg cgacgctggc ggtcatgaag aggatgagga
      481 tcgcccgcat cccgtagtag ctgaaccgct cccacatctc ggtgaagaag agcgtggaga
      541 gcccgcgcgg atgcccgaag aacgccgaat cgtgggcggc aggcccggcg cccttggcgt
      601 cgggaatcgc ggtggggctg gtcatcgttg ccaagagagt gactcctgga atggggtgtt
      661 actgtcgttt cctgaggatg tcgtccagca cgacgcggtc gatcttcccg tccatccgga
      721 cccgcacgtc gtagttctcc cagtacatga agtcccgcag ggcggccagg aacacatcgt
      781 tggcttttcc ctgcgccgct ttcagccact tctccggctg gcctgccggc tcacgaagca
      841 agatcggttc cagctgccgc acgatggccg gcgtgatggc aatgagatca gccgcctcgg
      901 aaggaaagaa gtgcagcttg tgaagggcca gcagacgttc cagttcggcg atcggatcct
      961 tggcgtcata gacccggatg tcgatgaacc ggtcgttggc gccgagatag ccgccgttct
     1021 tccgcaccac cagcagggca gccgactgca tgccccggcg gtccccgccg cccgcctgcc
     1081 ctgccttgag cgccgccatc agccggtcgg ccagcgagcc ggtgctcttc tcgaaggtct
     1141 cggccaggtt cttcaccgtc tggtccgaca ccatgatgtt ggcctgcgcg gcgtaggtct
     1201 tcccgacgat cacctcgccc ttgccgccga gcttgccgcc cggtgtgccg ccaacccgcc
     1261 cgccggccca gtcgaacgtc cgggtcccgg tgaagctggc cgagttaccc tgcgcatcca
     1321 ccatcccgac ctggcggtcc tgcagcatgg tgtcgctccg catgatgatg cggagcgcct
     1381 cctcggccgt ggcgccctgc gagatcagct ccagtccctt ctcgccatag gccgtgttgc
     1441 cgaggctctg ggtcgccacc gcgcccacgc ccgcctgtcc ccacggcacg attccgccca
     1501 cgttggggaa tttggattcg accgccacgc cgagatcgcc ggtagccgga tcgtacgcga
     1561 cgatgctgta ggtgtgagcc agcttctgga aatgcggagg tggagcgagg ggctgctgct
     1621 ggcctgcgag tacctggaac gtgaaggggg agagatatag cggaatcgcg gcgaggcaga
     1681 gccatcgttg ccacgatcga agcacggctc gctgcattcc ggttcccgcg gcaaggctca
     1741 cgttcactcc cgctcttttc cgagtttctt cttgagatgc tcgagctgcg cctcgacggc
     1801 agcatccatc tgctggcgcg agatctggtg cttgagcagg tcgccgtcga cgtcggtgtc
     1861 tggccgcacc ccacccgcgc tctcgaggtc ccgccaggcg gcctcctgcg cagccgtagt
     1921 cccgccggcc ggtgttcccg tcgtcctgag ctgcttgagt tcggcggtca tctgatcgat
     1981 ttcccgctgg gtcagcgcca gttcttcccg ctgcacctcg agcttcttgt cgagaatcga
     2041 gacccgttcg cggtgccgga ccgcgaactg ttccgccacc tgcaccgtct cgggatcggg
     2101 gatctgggcc gccagccgcc cgcggcgctc ggcgtcttcc agctgtttcc gttcggaggc
     2161 gagttgccgc tcggtggcgg tcagcgcgtc ccgcatggct gccaccgcca ccttggcctc
     2221 gaccagggcg gaatggagaa gcgcggcgcg ctgccggggc tcacccggca cggtatggtc
     2281 ggcgaggatt ctctcgagcc gggccttcag cccttcgaac accgtggggt tgtcccattc
     2341 ggggaattgt ccgaatggta cggatcgtcc ggaggggcgt caaggaagcc ggaccgttaa
     2401 cttgttgcac atgcgacgtt cccttctggt gactggtctc gccctgctct cggcctgcgg
     2461 cccccctcgt ggcggggggg cctgcgggct cactgccatc gccggcgcca ccatgctgct
     2521 gcaggaattc ggggtggccg gccagacgct cggagatccc ccaaccagcc tgccgccgca
     2581 tctggtggcc cgggtggccg tgggcccggc cttcgatgcc gtcgtcggcc gcaccgccga
     2641 cagcggttgg gtgatcggca tcgatggcga cgtcccgccg aacatcaagc ccggcttcgg
     2701 agtcctggtg ctcgatcccg ccggcaaggc ccgcggggtc atggtctacg agtccgatcc
     2761 gatccagggc gcgccgacga tcggcaagtt gtccatcgat actctgatgc ttccgctcat
     2821 cggcattcag ctcgacccgg cccgggtcga ggatccccgc tgcccgctct ttcccgacag
     2881 tgtgatccag cgatgagcgc tccccgcatc ggcatcaccg gcaccacccg gcactacgcc
     2941 ggcgccgacc gcagtaccgt caacgccgcc tacgtccgtt cggtcatcgc cgggggcggc
     3001 attccactgg tcctcccgcc gctcctcggc gatgcctatg ccgccgagat cctcgaagtg
     3061 ctcgacggcc tggtgctgag cggcggcgaa gatgtcgatc cggcgcacta tggggaagag
     3121 gcgcacccga ccgtgcggag caatatcgat cccctgcgcg atgcccagga gatgacgctc
     3181 taccggctcg cccgggaacg ggccctcccg gtgctcgcca tctgccgtgg catccagctg
     3241 gtgaacgtgg ccctgggcgg ctccctctgg caggacctgc cgagcgacaa gcccgatggc
     3301 ctgccccaca accagcccga tggtcgcgac gcccgcaccc atccagtaga agtaattccc
     3361 gattcccggc tggcccgggc gctcggcgcc acccgcttcg aggtcaacag cttccatcac
     3421 cagtcgattc gggagctcgc acccgggctg gtggtcaccg cccgggcgcc cgacggcgag
     3481 atcgaaggca tcgaatccgc gcccggcgat ccctggctgc tcgccgtcca gtggcatccg
     3541 gaggaatttc acgcccacga taccgcaccg gaccacgggc tcttcgcggc gctcgttacc
     3601 gagtgccgcc gccgggccgg gagcgaatcc gcgctgagcc ggagctagtc ccgcccgcgg
     3661 ggtgtcccgt cagtgcagtt ccctcgacgg aaagagcacc cgctccgaca gatcgttgag
     3721 cgccgaccgg atggtgggaa accgctccgc cgcggtagag agcaccccct cgagctggaa
     3781 gcggtcggcg agctcatgat ccgaggccat ggcatagccc cggcgaccaa gggagtcgta
     3841 ataggtcagg tcgggcccgc cgcgacggat ccgccgggcc tcgatataat gagggaacag
     3901 ccccgccagc cacagcgcgt agttgcccag atgcagcagg acccggaagc ggcgggcccc
     3961 ctggctggct tcgagatcgc tgacaatatc gacgaggtaa cggtgcgact ggtcgtcgtt
     4021 ccagtccacc cgctgggccc ggtcccgctg cccgaactcg agcagcagcg ccgccaggta
     4081 gtcggccaca tcccgctcgg cgacgcccgc ctgcagcagc gtgtggcgga ccatgacgta
     4141 gaagaagagc acttcgctcg gcaccatcat ggtgcgcacc gcgagcaggc cttcggcgag
     4201 ctcgggtgtg tcgagcaggg ggtcaggacc ttcccgctcg agccgctgtt ccagcgcggc
     4261 gcgccgcacc gccgagcccc ggctcaagag cagcagcacc agctgcaggt ctccggcctt
     4321 caggcggcca cgcatgttcg cgaggatcat gtcgtctcct tccgaagctg aatcggctcc
     4381 aaccctgcgg gacaccgtac cgaccgacgc gctgtccagt gtggtggcat tcgcgcgggc
     4441 cctgaccggc acgttgcgcc ctctatcact actcgaccga ctggtacagg aagtcaaggc
     4501 atttttcggg cccgtgcctg tggcggcgat caccgtcgat cagcagggag ccgtggagag
     4561 tgctaacagg gactccggcg acgccggatt cgagccggtc ctcgccacca tcctccagtc
     4621 cggccagccc ctgctccgcc cggtggaggg cggaaccatc ctcggcgtgc ccctgctcgg
     4681 aagacgcgcc ctccttgggg cgattgcact tcggctcgac cgtcaggccg aggacgacga
     4741 cctccgccgg ctccaggcga tgggcgcgat cgcgagtgtc gcgctcgagg gagcccggct
     4801 ggtggagatg atggatcaga gccggcagcg ctgggatgaa gcgatcgacg cggtaagcct
     4861 ggcgctctgc ctcctcgacc gcggcggccg ggtcgaacgg gtgaatcgcg gcttcaccga
     4921 gctgctctcg ctcaccccgg ttacagccgc cggccggccc tggcaggccg tcctcccgcg
     4981 cgagtggcac gaggcggtct cccgcgcgct cctcaatcgg ggcaccgagg aggaactgcg
     5041 gctccgcgac cagtcgattg cggtcaccgc cttccagagt tcgcccggcg atccgggccg
     5101 ggtggtgctc ctcttcgaga acaccaccga tcgccggctc ctgcaggatc gcctgctgca
     5161 gtcggtgaag ctctccgcca tcggccagct gatcgccggc gtggcccacg acctcaacaa
     5221 tccactcacc tcggtcgtgg gcttcgcgga cttcctcgcc gaggcggccg acgtgccgcc
     5281 ccggatccgg gaaccgctcc gggtgattca gcaggaagcc gagcgtgcct cgaacatcgt
     5341 gaagaacctg ctcagcttcg cccggcggca ggaaagccgg cagactgcct ccatccagcc
     5401 gatcctcgag gcaaccgtcg gtctcttccg caatcagctg agtggcgacg agatcgcgct
     5461 cgagctggag ctggcgcccg acctgcccac cctcgagctc aatccgaacc agatccagca
     5521 ggtcttcgtc aacctgatcc agaatgccgc ccaggccatt caatcgaccg ggcgccccgg
     5581 cactatccgg gtcatcactc ggcgctggat ggacggtatc gccatcgaag tcaccgacga
     5641 tggacccggc atggctccgg agcacgcggc ccaggcattc gagcccttct tcaccaccaa
     5701 gccggacggc cagggcaccg gactcggcct gtcgatcagt cagggcatcg tgaaggaaca
     5761 tggcgggcgc atcaccctgg cgacccggtt cggcgccggc tccaccttca ctatcgagct
     5821 cccgggccgg gtccgccctt cggcagagcc gatcgcgccg ccaccgccgc cggtcacccg
     5881 gcccctggag gtgctggttc tcgacgacga gcctcacatc ctgcactaca tccggtcgac
     5941 gctcgaggcc tggggccaca ccgtagccac cgcgtcggat ggccaggccg gactcgagcg
     6001 cgcgatcgcg gagcctttcg acctgatcat ctccgatctc cggatgcccc ggctgggcgg
     6061 gcgcgagttc tacgaagcgc tgcttg
//
LOCUS       DATIFF010000827         1537 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_411305, whole genome shotgun sequence.
ACCESSION   DATIFF010000827 DATIFF010000000
VERSION     DATIFF010000827.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_411305"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..198
                     /locus_tag="VLD58_12140"
     CDS             <1..198
                     /locus_tag="VLD58_12140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55104.1"
                     /translation="PRAAVISVGRNNYGHPAAETLRRLDARGTDVRRTDRDGEIHVAT
                     DGATMTVRSKARAVTYALRNQ"
     gene            246..1274
                     /gene="fbp"
                     /locus_tag="VLD58_12145"
     CDS             246..1274
                     /gene="fbp"
                     /locus_tag="VLD58_12145"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HSB55105.1"
                     /translation="MTTIETFILDQESKYPEATGELSNLLYDIALATKIITAAIRRAG
                     LVNILGGVGSVNVQGEEQQKLDVFANETIKNCLKHTGRVCVMGSEEDEDIIPIPPEYP
                     AGKYAVLFDPLDGSSNIDVNAAVGTIFSIYRRVSLEGRGTARDVLQPGCRQVAAGYVM
                     YGSSTMLVYTTGQGVHGFTLDPTIGEFLLSHPRIVTPRIGHYYSVNESNFGRWEKGVQ
                     AAVRALKGDLPDIVKPKNCRYAGSLVADFHRNLIAGGIFLYPGDTKNPRGKLRLLYEA
                     SPMAYIAEQAEGSATDGLNRILDIVPESLHQRTPLIIGSREDVGFVADTIRRAAGRTS
                     APVSTPAL"
     gene            1271..>1537
                     /locus_tag="VLD58_12150"
     CDS             1271..>1537
                     /locus_tag="VLD58_12150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HSB55106.1"
                     /translation="MTTVYGPGDWTGDPEADVGRPGAFPFTRGVHPGMYTSRLWTMRQ
                     YAGFGTAEETNERFRKLLDAGQTGLSVAFDLPTQMGYDADHPQAL"
BASE COUNT          277 a          549 c          497 g          214 t
ORIGIN      
        1 cccagggcgg ccgtgatctc ggtggggcgc aacaactacg gccacccggc cgcggagacc
       61 ctgaggcggc tggacgcgcg ggggaccgac gtgcggcgca ccgaccggga cggcgagatc
      121 cacgtggcca cggacggagc cacgatgacg gtgcgcagca aggccagagc cgtgacgtac
      181 gcactgcgca atcagtgaac ggtaaaccgc gaaccgggtg aggctccgtg ctccacaact
      241 cgtccgtgac caccatcgag accttcatcc tcgaccagga gagcaagtac ccggaggcca
      301 cgggcgagct ctcgaacctc ctctacgaca tcgcgctggc caccaagatc atcaccgccg
      361 ccatccgccg cgcgggcctg gtgaacatcc tcgggggcgt ggggtcggtc aacgtccagg
      421 gagaggagca gcagaagctg gacgtcttcg ccaacgagac cataaagaac tgtctcaagc
      481 acaccgggcg ggtgtgcgtg atggggtccg aggaagacga ggacatcatc cccatcccgc
      541 ccgagtatcc cgcgggcaag tacgccgtgc tgttcgatcc gctggacggc tcctccaaca
      601 tcgacgtcaa cgcggcggtc ggcaccatct tcagcatcta tcgccgggtg agcctcgagg
      661 ggcggggcac cgcgcgggac gtgctccagc cggggtgccg gcaggtcgcc gcgggatacg
      721 tgatgtacgg ctcgagcacc atgctggtgt acaccaccgg acagggggtc cacggcttca
      781 ctctcgatcc cacgatcggc gagtttctcc tctcgcaccc gcggatcgtc acgccccgga
      841 tcggccacta ctacagcgtg aacgagtcga acttcggccg ctgggagaag ggcgtgcagg
      901 ccgccgttcg cgcgctcaag ggcgatctgc ccgacatcgt gaagccgaag aactgccgct
      961 atgccggatc gctcgtggcg gacttccatc gcaacctcat tgccggcggg atctttctct
     1021 atccgggcga caccaagaat ccccgcggca agctgcggct gctctacgag gccagcccca
     1081 tggcctacat cgccgagcag gcggagggct ccgccaccga cggcctcaac cgcattctcg
     1141 acatcgtgcc cgaaagcctg caccagcgca cgccgctcat catcggctcc cgggaagacg
     1201 tcggcttcgt cgccgacacc atccgccggg ccgccggacg gacctccgca ccggtctcca
     1261 cgcccgcgct gtgacgacgg tctacggccc cggcgactgg accggggacc ccgaagcaga
     1321 cgtcggccgg ccgggcgcgt tcccgttcac gcgcggcgtc catcccggca tgtacaccag
     1381 ccggctctgg accatgcgcc agtatgccgg cttcggcacc gcggaggaga ccaacgagcg
     1441 gttccggaag ctgctcgacg ccgggcagac gggactctcg gtggcgttcg atctcccgac
     1501 ccagatgggc tacgacgccg accatccgca ggccctc
//
LOCUS       DATIFF010000828         2040 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1028531, whole genome shotgun sequence.
ACCESSION   DATIFF010000828 DATIFF010000000
VERSION     DATIFF010000828.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1028531"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2040)
                     /gene="treY"
                     /locus_tag="VLD58_12155"
     CDS             complement(<1..>2040)
                     /gene="treY"
                     /locus_tag="VLD58_12155"
                     /EC_number="5.4.99.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR02401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047470 - (1,4)-alpha-D-glucan
                     1-alpha-D-glucosylmutase activity [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose synthase"
                     /protein_id="HSB55107.1"
                     /translation="INSLAAIRVEDRDVFEEAHALTFQFLARGMVHGLRIDHPDGLFD
                     PSAYFLRLQERYFLDQARKLAGDAVDEASWPAVSEALLRRWRAEAGSDPSSPLRRALW
                     VVVEKIQGGKERIPDDWAVHGTTGYRFANLTTGVLVDASAGREFTDIYEKFIGHPIRF
                     ESLLVEKKKQVMAVSMSSEINGLARELNRISEMNRRTRDFTLNSIRRALIGFIAHFPV
                     YRTYVSSAPGVDERDAHYIQWTIARARVADPTTNASLFQWLEDMLLKRYPDHLPLAER
                     QVMLHFAMKLQQITGPVMAKGLEDTVFYVYNRLVALNEVGGEPEHFGTSVDTFHHRNI
                     ERARDFPAALLASSTHDTKRSEDVRARLVVLSEMPGEWRRALESWRKLNAIHRTELAG
                     KPAPSGNDEYLLYQIILGVWPMGEMDMAQLPAFRARIREYMLKAIREAKVHTSWTNPD
                     PDYEDATLRFVDRVLDPGVSRVFFDQARQLKERLERSGQVNSLVQAALKLASPGVPDL
                     YQGCELWDLSLVDPDNRRPVDFQLRDGLLSELLRQHASAPVSVARDTWAHPADGRCKL
                     LLTTMMLRLRQAHPELFRRGGYEPLEVDGIAAARSLAFARRLGDEAVVVAAPRLVTRA
                     LRAGLGPVYGSTRMRLPTDLAGRRFRNVVTGVRLQPLEGGLALGPLFTDFPVAVLE"
BASE COUNT          309 a          708 c          713 g          310 t
ORIGIN      
        1 ctccaggacc gccaccggga agtcggtgaa cagcggcccc agggccagac ccccctcgag
       61 cggctgcagg cgcaccccgg tgaccacgtt ccggaagcgc cgcccggcga ggtcggtggg
      121 gagccgcatg cgcgtcgaac cgtaaaccgg accgagtccg gcgcggagag cgcgggtgac
      181 cagccgcggc gcggcgacca ccaccgcctc gtcacccagc ctgcgagcga aggccagcga
      241 ccgggccgcg gcgatgccgt ccacctccag cggctcgtag ccgccgcgcc ggaacagctc
      301 ggggtgggcc tgccggagcc ggagcatcat cgtggtcaac agcaatttgc agcgtccgtc
      361 tgccgggtgt gcccaggtgt cgcgggccac gctcaccggt gccgaggcgt gctgccggag
      421 cagctcggag agcagcccgt cccggagctg gaagtccact ggacggcggt tgtccgggtc
      481 caccagcgac agatcccaga gctcgcagcc ctggtacagg tccggcacgc cggggctggc
      541 gagcttcagc gcagcctgca ccagcgagtt cacctggccc gaccgctcca gccgctcctt
      601 gagctgtcgc gcctggtcga agaagacgcg gctcaccccc gggtcgagca cgcggtccac
      661 gaagcggagc gtggcgtcct cgtagtccgg gtcggggttg gtccagctgg tgtggacctt
      721 cgcctcgcgg attgccttga gcatgtactc gcggatccgg gcccggaacg ccggcagctg
      781 cgccatgtcc atctcaccca tcggccagac gccgagaatg atctggtaca gcaggtactc
      841 gtcgttcccg gagggcgcgg gcttgccggc gagctcggtc cggtggatgg cgttgagctt
      901 ccgccagctc tccagcgcgc ggcgccactc acccggcatc tccgagagca ccaccaggcg
      961 ggcccggacg tcctcgctcc gcttggtgtc gtgggtggag ctggcgagca gggccgccgg
     1021 gaagtcacgg gcgcgctcga tgttccggtg atggaaggtg tccacgctgg tcccgaagtg
     1081 ctccggctcc ccgcccacct cgttgagcgc caccaggcgg ttgtagacgt agaagacggt
     1141 gtcctccagc cccttcgcca tcaccggccc ggtgatctgc tggagcttca tggcgaagtg
     1201 cagcatgacc tggcgctcgg cgagcgggag gtgatcggga taccgcttga gcagcatgtc
     1261 ctcgagccac tggaacagcg aggcattggt ggtcgggtcc gccacccggg cccgggcgat
     1321 ggtccactgg atgtagtgcg cgtcgcgctc gtcgacgccg ggagcggacg agacgtaggt
     1381 ccggtacacc gggaagtggg cgatgaagcc gatgagcgcc cgccggatgg agttgagggt
     1441 gaagtcgcgg gtgcgccggt tcatctccga gatccggttc agctcgcggg ccaggccgtt
     1501 gatctcgctc gacatgctca ccgccatcac ctgcttcttc ttctccacca gcagcgactc
     1561 gaagcggatc gggtgaccga tgaacttctc gtagatgtcg gtgaactccc gccccgcgga
     1621 ggcgtccacc agcaccccgg tggtgaggtt cgcgaagcga tagccggtgg tgccgtgcac
     1681 cgcccagtcg tcggggatgc gctccttccc gccctggatc ttctccacca ccacccagag
     1741 cgcgcggcgg agcggcgagc tcggatcgga ccccgcctcc gctcgccagc gccggagcag
     1801 cgcctcgctc accgcgggcc agctcgcctc gtccaccgcg tcgccggcga gctttcgcgc
     1861 ctggtccaga aagtaccttt cctgaagccg gaggaagtag gcgctcggat cgaacagccc
     1921 atcggggtgg tcgatccgca gcccgtgcac catgccccgg gcgaggaact ggaaagtgag
     1981 cgcgtgcgcc tcctcgaaga cgtcgcggtc ctcgacccgg atggcggcga ggctgttgat
//
LOCUS       DATIFF010000829         6041 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1182427, whole genome shotgun sequence.
ACCESSION   DATIFF010000829 DATIFF010000000
VERSION     DATIFF010000829.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6041
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1182427"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(35..1162)
                     /gene="hppD"
                     /locus_tag="VLD58_12160"
     CDS             complement(35..1162)
                     /gene="hppD"
                     /locus_tag="VLD58_12160"
                     /EC_number="1.13.11.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003868 - 4-hydroxyphenylpyruvate
                     dioxygenase activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylpyruvate dioxygenase"
                     /protein_id="HSB55108.1"
                     /translation="MATQVLSSADPQTADPFPINGTDFVEFYVGNAKQASHYYRSAFG
                     FQLAGYRGPETGVRDRASYLLVQDKVRFVLTSALGPDSAIAEHHKRHGDGVRDLALWV
                     DDCRRSFEYAVAHGAVVVQEPTVLKDEQGEVVMAAIRTYGDTIHSLVERRNYQGLFLP
                     GFKPMTSRYQPAPVGLKYVDHCVGNVELGKMNEWVGFYERVMGFKNLISFDDKDISTE
                     YSALMSKVMSSGNERIKFPINEPAEGKKKSQIDEYLEFYHGPGVQHVAIATDNIIATV
                     SALRERGVEFLTVPGAYYDTVLDRVGEIDENLEPLRELGILIDRDDEGYLLHIFTKPV
                     QDRPTVFYEIIQRKGAKSFDKGNFKALFEAIEREQAARGNL"
     gene            1267..2166
                     /locus_tag="VLD58_12165"
     CDS             1267..2166
                     /locus_tag="VLD58_12165"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HSB55109.1"
                     /translation="MDINQIELRHLRYFTILAQELHFGRAATRLGIAQPPLSQQIQRL
                     EAALGTRLLDRTSRRVRLTDAGAAFLVEAERVLAGVETAVEAARRTGRGESGELRVAF
                     AATVMFLALPEIIREFRLRFPRVHLDLREMPTGPQLTALRDGDIDIGFVREPRPDPDL
                     EIVTVMREPLRIAVNRSHPLAARPTLAVRDLANEPFVLFPADLAPGLHAQVMALCRAA
                     GFSPRVVEESRELYTSVSLVEAGVGVSILPASVEKLGWRGVRYRPIPSAGAETRIAAA
                     WRKDRVRPVIDAFMGVVGKLVPA"
     gene            2264..2818
                     /locus_tag="VLD58_12170"
     CDS             2264..2818
                     /locus_tag="VLD58_12170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55110.1"
                     /translation="MRHSIAARAACRPHTWAACLLALVLLFVTGTPLRLESQVSFGVG
                     ASLQKVSHRAWGYRFIGSAVDVAVRTSPSTNFTFGVQALGHDEGTEVDPLHLRTAEIG
                     MQWVAGRGELLHLAIGFHAGAYLLSEYDATYGGPILSLTARLSLHPVRGVGLFVSPLG
                     RAFGGERGGSTYGVSFGVLLGTNH"
     gene            2839..3063
                     /locus_tag="VLD58_12175"
     CDS             2839..3063
                     /locus_tag="VLD58_12175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55111.1"
                     /translation="MRIRPIVREVYRPHQLALLFCWCWAQAARSRVVELGLATGIGLF
                     ELDVDSEDNNGGGGTSYGLALGIQLRGDGW"
     gene            complement(3074..5308)
                     /locus_tag="VLD58_12180"
     CDS             complement(3074..5308)
                     /locus_tag="VLD58_12180"
                     /inference="COORDINATES: protein motif:HMM:NF013727.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015616 - DNA translocase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HSB55112.1"
                     /translation="MSDEGRRHLGAIVALVAGSFVGLTLLPVHLTGGIGEWLGSTLWN
                     VLGIGALGFPLLGLGLGLAGFDRLPRLDMKRTAVLVIGLTVLVPFLVGVVTEYTPSAP
                     EYLAGRLTGWLPGLLSYYIVKAIGVAGGVLLGFALLSALTIATIAWHPLTRLARPTSG
                     AAAAPVTTTRRVSSPATALQAGAATGPEEEDHPVFPPPPRREKKARKAAKAAGDLPIG
                     DPTDETQLPPIELLTPPPAQDRDAGQAELDRLGQVLLETLKTFKVEGSIAGRTTGPVV
                     TQFEVVPAPGVKVGRIASLADDMAITMRAQSIRVAPIPGKGAVGVEIPNPNARMVTLR
                     ELVEAPEWEASRAVLPIALGRDLEGKPVIADLAKMPHLLIAGATGSGKSVAINTIITS
                     LVYRYTPKQLRFLMVDPKMVELSMYNALPHMRHKVVTNNSDAATVLKWGVIEMNRRYE
                     LLHANGARNMADFNRKADEGKPLRKPPKPKPTIASISAEAEPSAPEAVDDEVYRDGPL
                     PLIVMIVDELADLMMTVQGEVETPLAILAQKARAIGIHLILATQRPSVNVLTGLIKAN
                     FPSRIAFRVASKVDSRTILDQNGAEALLGNGDMLFLPPGKSEPMRLQGAYIATEETER
                     VMQWYEQRRDVRAAQPAATPSSEEDILALMRALEAEEEGGSGGGYEGERDPLFRDAAE
                     VCVQNQGGSTSLLQRRLSIGYGRAARIIDQLHMAGILGPQPPGSSKPREVLIGIDQID
                     EYCG"
     gene            complement(5305..>6041)
                     /locus_tag="VLD58_12185"
     CDS             complement(5305..>6041)
                     /locus_tag="VLD58_12185"
                     /inference="COORDINATES: protein motif:HMM:NF015962.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="2-phosphosulfolactate phosphatase"
                     /protein_id="HSB55113.1"
                     /translation="AAGLTPGEVQGRTVFVIDILRAGTTMCAALTHGARAVVPVASTE
                     EALRLASTLGADETVLAGERNALQIPGFALGNSPREMTPEVVRGKTVIMTTSNGTGAL
                     LTVASSPQVYLACAANFSAASSRAHEAWERKEDLLIVCAGREGRFALDDAYCAGRLVE
                     TAMGGGRGRKGLNDAAIATLDLVRRYGRKWERPLSSSRAGRELVELGFKDDVADAAQV
                     DAYPVLAQFHNRRVTVVAPAPQAPAP"
BASE COUNT          917 a         2025 c         2064 g         1035 t
ORIGIN      
        1 cggggcatct ggcccagcgt gtggtagaaa ggcattagag gttcccccgc gcagcctgtt
       61 cccgctcgat cgcctcgaac agcgccttga agttgccctt gtcgaagctc ttggcgccct
      121 tccgctggat gatctcgtag aacaccgtcg gacggtcctg caccggcttg gtgaagatat
      181 ggagcaggta cccctcgtcg tcccggtcga tcaggatgcc gagctcgcgg agcggctcga
      241 gattctcgtc gatctccccg acccggtcga gcacggtgtc gtagtaggcc cccggcacgg
      301 tcaggaattc gaccccccgt tcgcggagcg cgctcaccgt ggcaatgatg ttgtcggtcg
      361 cgatggcgac gtgctgcact cccgggccgt gatagaactc caggtactcg tcgatctggg
      421 acttcttctt gccctcggcc ggctcgttga tcgggaactt gatccgctcg ttgccgctcg
      481 acatcacctt cgacatcagg gccgagtatt cggtggagat gtccttgtcg tcgaacgaaa
      541 tcaggttctt gaagcccatc acccgctcgt agaagcccac ccactcgttc atcttgccga
      601 gttcgacgtt gccgacacag tggtcgacgt atttgaggcc gaccggcgcg ggctggtaac
      661 ggctggtcat gggcttgaag ccggggagga agaggccctg gtagttccgg cgttcgacca
      721 ggctgtggat agtgtcgcca taggtgcgga tggcggccat caccacttcg ccctgctcgt
      781 ccttgagcac ggtcggctcc tggaccacga ccgccccgtg agccacggcg tactcgaatg
      841 agcggcggca atcatcgacc cagagggcca ggtctctcac cccgtcccca tgccgcttgt
      901 gatgctcggc gatggcagaa tcagggccga gggcggaggt caggacgaaa cggaccttgt
      961 cctgaaccag cagatagctg gcgcggtcgc ggaccccggt ctcgggaccg cggtagccgg
     1021 ccagctggaa gccgaaggcg ctgcggtagt agtggctcgc ctgcttggcg ttgccgacgt
     1081 agaactcgac aaagtcggtc ccgttgatcg gaaacggatc ggcagtctgg ggatcggcgg
     1141 aggagagaac ctgagtcgcc atggggaggc tccggacgat gtaaggtgtc acggctcaac
     1201 agcttgccaa attagccgtc ggataccaat atgtccaata tcattaatcg gcgtaattga
     1261 tactacatgg atatcaatca gatcgaactc cgccacctgc gctacttcac tatcctcgcg
     1321 caggagctcc acttcgggcg cgccgccacc cgcctcggca tcgcccagcc tcccctctcc
     1381 cagcagatcc agcggctcga ggccgccctc ggcacccggc tcctcgaccg caccagccgc
     1441 cgagtcagac tgaccgacgc gggtgccgca ttcctggtcg aggcagaacg ggtgctggca
     1501 ggcgtggaga ccgcggtgga agcggcccgg agaaccgggc gaggggaatc gggagagctc
     1561 cgggtggcct ttgccgcgac ggtgatgttc ctggccctgc ccgagatcat ccgggaattt
     1621 cgcctccgct tcccgcgggt gcacctcgac ttgcgggaaa tgccgaccgg gccgcagctg
     1681 accgcgctcc gagacggcga catcgatatc ggctttgtgc gcgagccgcg gccggatcct
     1741 gatctcgaga tcgtcacggt gatgcgggag ccgctccgga ttgcggtcaa ccgcagtcat
     1801 cccctggccg cccgtccgac tctcgcggtg agggacctgg ccaacgagcc gttcgtcctc
     1861 ttccccgccg acctcgcccc gggactccac gcacaggtga tggcgctctg ccgggccgcg
     1921 gggttctctc cccgggtggt ggaggaaagc cgcgagctct acaccagcgt gagcctcgtc
     1981 gaagcgggcg tcggcgtgtc catcctcccg gcgtcggtcg agaagctggg gtggcggggg
     2041 gtacgctacc gcccgatccc ctcggcaggg gcggagaccc gtatcgccgc cgcgtggcgg
     2101 aaggaccggg tgcgcccggt gatcgatgca ttcatgggag tggtgggaaa gctggtcccc
     2161 gcctgaaaca cccttccccg atgggggatc cggtcggcac aggagatgcc tgacaagtcc
     2221 tgtgcgggtg ctggtcggct cgactgggga gggttctgcg tccatgcgac actcaatcgc
     2281 cgcgcgcgca gcgtgtcgtc cacacacatg ggcggcctgt cttctcgcgc tcgtcctgct
     2341 cttcgtgaca gggacgccac tgcgcctcga atcccaggtg tcgttcgggg tcggggccag
     2401 cctccagaaa gtctcgcacc gcgcctgggg ctaccgattc atcggctccg ctgtggacgt
     2461 ggcggtacgc acctccccat ccaccaactt caccttcggg gtccaggccc tcgggcatga
     2521 cgaaggcacc gaggtggatc cccttcacct ccggaccgcc gagatcggga tgcagtgggt
     2581 ggcggggcgc ggcgagctac tccacctggc gatcgggttc catgcggggg cgtacctgtt
     2641 gagcgagtac gatgcgacgt acggcggtcc gatcctgtcg ctgaccgccc ggctcagcct
     2701 ccatccggtg agaggcgtgg gactcttcgt gtcgccgctg ggccgggcgt tcggcggaga
     2761 gcggggtggc tccacctatg gcgtgagctt cggcgtgctg ctgggaacca accactgagc
     2821 cgtgaggccc ttggatccat gcgaatccgt ccgatcgtcc gggaggtgta ccggccgcac
     2881 cagctcgccc tcctcttctg ttggtgctgg gcgcaagccg cccggagccg ggtggtcgag
     2941 ctgggactcg ccacgggcat tggcctcttc gagctcgacg tggacagtga ggacaacaac
     3001 ggcggcgggg ggacttccta cggactcgcg ctcggcattc agcttcgcgg cgacggatgg
     3061 tgagggtgat gccctagccg cagtattcgt cgatctggtc gattccgatc aggacctcgc
     3121 ggggcttgct tgaacccggc ggctggggac cgaggatacc ggccatgtgg agctgatcga
     3181 tgatgcgggc cgcccggccg tagccgatcg agagccgccg ctgcagcagg gaagtcgacc
     3241 caccctggtt ctgcacgcac acctcggcgg catcgcggaa gagcgggtcg cgctccccct
     3301 cgtagccgcc cccgctgccg ccttcctcct cggcctcgag cgcccgcatc aacgccagga
     3361 tgtcttcttc actcgagggg gtggcggcgg gctgggccgc ccggacatcc cgccgctgtt
     3421 cgtaccattg catcacccgt tcggtctctt cggtggcgat gtatgcgccc tgcagccgca
     3481 tcggctcgct cttgccgggc gggaggaaca gcatgtcgcc gttgccgagc agcgcctcgg
     3541 caccgttctg atccaggatg gtgcggctgt cgaccttgga ggcgacccgg aaggcgatcc
     3601 ggctcgggaa gttggccttg atgagaccgg tgagcacgtt caccgagggc cgctgggtcg
     3661 caaggatcag gtggatcccg atcgcccggg ccttctgcgc caggatcgcg agcggggtct
     3721 cgacctcgcc ctgcaccgtc atcatcaggt cggcgagttc gtcgacgatc atcacgatga
     3781 gcggcagggg gccgtcgcgg tacacctcat cgtccacggc ctcgggcgcc gaaggttcgg
     3841 cctcggcact gatcgaggcg atggtcggct tgggcttggg cggcttgcgg agcggcttcc
     3901 cttcgtcggc cttgcggttg aagtcggcca tgttgcgggc gccattggcg tgcagcagct
     3961 catagcgccg gttcatctcg atcacgcccc acttgagcac ggtggcggcg tcgctgttgt
     4021 tggtcaccac cttgtgccgc atgtggggga gcgcgttgta catcgagagc tccaccatct
     4081 tcggatccac catcaggaac cggagctgct tcggggtata gcggtacacc aggctggtga
     4141 tgatcgtgtt gatggcgacc gacttgcccg agccggtggc gcccgcgatc aggaggtgcg
     4201 gcatcttggc caggtccgcg atgaccggct tgccttcgag atcgcggccc agcgcgatcg
     4261 gcagcaccgc tcgcgaggcc tcccactccg gggcctccac cagctcgcgc agcgtcacca
     4321 tccgggcgtt ggggttggga atctcgacgc ccacggcgcc cttccccgga atcggagcca
     4381 cccggatcga ctgggcccgc atggtgatgg ccatgtcgtc cgccagcgac gcgatgcgcc
     4441 ccaccttcac accgggcgcc gggaccacct cgaactgagt gaccaccgga ccggtggttc
     4501 gccccgcgat gctcccctcg accttgaagg tcttgagtgt ctccagcagc acctgcccca
     4561 gccgatcgag ctcggcctgg ccggcatcgc gatcctgcgc cggcggtggc gtgagcagct
     4621 cgatcggcgg gagctgggtc tcgtcggttg gatcgccgat gggcagatca cccgccgcct
     4681 ttgccgcctt cctggccttc ttttcccgcc tgggcggagg cgggaagacg ggatgatcct
     4741 cttcctccgg cccagtcgcc gctccggcct gaagcgccgt ggcgggagac gagacacgcc
     4801 tggtggtcgt cacgggagcc gcggcggccc cactggtggg cctggcgagc cgggtcagcg
     4861 gatgccacgc gatcgtcgca atcgtcagcg cagagagcag cgcaaaaccg agcagcaccc
     4921 cgccggccac gccgattgcc ttgacgatgt agtaggagag aaggccgggg agccagcccg
     4981 tgaggcggcc ggccaggtac tcgggagcgc tgggtgtgta ttcggtgacc acgcccacga
     5041 ggaatgggac cagcactgtg agcccgatga ccagcaccgc ggtgcgcttc atgtcgagcc
     5101 gcggcaaccg gtcgaatccc gcgagcccca gtcccagccc cagcagcgga aagccgagcg
     5161 cgccaatgcc gaggacattc cagagggtgc tgccgagcca ctcaccgatt ccgccggtca
     5221 ggtgcaccgg cagcagcgtc agcccgacaa agctgccggc gaccagcgcc acgatggcgc
     5281 ccagatgacg gcggccctcg tcgctcacgg cgcgggggcc tgcggggcgg gagccacgac
     5341 cgtcacccgc cggttgtgga attgcgccag caccgggtag gcatcgacct gggcggcatc
     5401 ggccacatca tccttgaagc ccagttccac cagttcgcgg ccggcgcggc tggacgagag
     5461 cgggcgttcc cacttgcgac cgtaccggcg caccagatcg agggtcgcga tcgcggcatc
     5521 gttgagcccc ttgcggcccc gtccgccgcc catggccgtc tccaccagcc ggccggcgca
     5581 ataggcgtcg tcgagcgcga agcggccctc ccggccggca cacacgatca gcaggtcttc
     5641 cttccgttcc cacgcctcgt gggcgcggct gctcgcggcc gagaagttgg cggcgcaggc
     5701 gagatagacc tgggggctgc tcgcgaccgt gagcagcgcg ccggtgccgt tgctggtcgt
     5761 catgatcacg gtcttgcccc ggacgacctc cggcgtcatc tcgcggggcg agttgcccag
     5821 cgcgaagccc gggatctgga gcgcgttgcg ctcgccggcc agcacggttt catccgcgcc
     5881 gagggtggag gccagccgca gcgcctcttc ggtgctcgcg accggtacca cggcgcgggc
     5941 cccgtgggtg agggccgcgc acatggtggt gccggcccgg agaatgtcga tgacgaagac
     6001 ggtccggccc tggacctcac cgggggtgag gccggcggcg g
//
LOCUS       DATIFF010000830         2095 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_719600, whole genome shotgun sequence.
ACCESSION   DATIFF010000830 DATIFF010000000
VERSION     DATIFF010000830.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2095
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_719600"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..453
                     /locus_tag="VLD58_12190"
     CDS             <1..453
                     /locus_tag="VLD58_12190"
                     /inference="COORDINATES: protein motif:HMM:NF037003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55114.1"
                     /translation="VGVVGWGGAPHASRLTPDEQYSHITLWSLLAAPLLLGNDLTRLD
                     PFTLSLLTNDEVIAVDQDPLGRAARRVYDRDGWQVWVRPLADGRKAAGIFNLDSTFRS
                     FSLDPAELQLEAGAALRDLWRQREAGTLTSGYRISVPAHGVVLLGVGK"
     gene            complement(487..>2095)
                     /locus_tag="VLD58_12195"
     CDS             complement(487..>2095)
                     /locus_tag="VLD58_12195"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSB55115.1"
                     /translation="KLPGMLYASIERAPTLGGVLVRFDDAAARKVPGVRAVKAVTAGV
                     HQGVAVLADDTWSALRGRAQLKIEWAPGSAAQFDSEQYLSKLPTMLEGHRYPVRAEGD
                     AAAALSASAKRHSATYLFPFQAHAPLETQNCTAHVLADRAELWVPTQTDVRTLAMAAR
                     VTGLPEEKITLHPMLMGGGFGRRLFADFVAEAVQLSKETRRPVQVLWSRQDDMRFGYF
                     QPATIERFEAGLTAGGSLTSLVHHSSASDLTIYDIHGGRNIWDDPPKAPRAENSYAED
                     GSPWGAFDTPYVFPSLLVDCVDVTSPVPVGPWRAVEYPSTVFGRESFLDELAEMMGKD
                     PIELRLSLLPDDPAPAGRRPLDRSRLRAVLADVRTRSGWGKPLPQSSDRTWGRGVAVN
                     VYHRGTYLAMVAEVSVARDYSDLRVHRIVAAVDCGLALNPLGIAGQTESAVTWGLSAA
                     LAGKMNFRNGAGVESSYRDFQVMTIDRMPVVETHILPSDAEPRGYGEHPVPLVAPAVA
                     NAVFAATGRRVRELPITPERLAAARET"
BASE COUNT          321 a          724 c          726 g          324 t
ORIGIN      
        1 gttggggtgg tcgggtgggg cggcgcgccg catgcctcgc ggctcactcc ggacgaacag
       61 tacagtcaca tcaccctgtg gagcctgctc gcggcgccac tcctgctggg caacgatctc
      121 accaggctcg acccgttcac cctgagcctg ctcaccaacg acgaggtcat cgcggtcgat
      181 caggacccgc tgggccgcgc cgcccggcgg gtgtacgacc gggacggatg gcaggtctgg
      241 gtgcgcccgc tggccgacgg ccgcaaggcc gccgggatct tcaatctcga ctcaaccttc
      301 cgctcgtttt cgctggatcc ggcggagtta cagctggagg cgggagcggc gctccgggac
      361 ctgtggcgcc agcgcgaggc gggaacactc acttccggct atcgcatctc ggtgccggct
      421 catggggtgg tcctgctggg agtcggcaag tagcgctacg ggcgcagatg cctggggtgg
      481 tgcgtgtcag gtctcccggg ccgcggccag cctttccggc gtaatcggca actcgcgcac
      541 ccgtctcccg gtcgccgcga agaccgcatt ggccaccgcc ggcgccacca gcggcaccgg
      601 atgctcgccg tatccgcgcg gttcggcgtc gctcggcagg atatgggtct cgaccacggg
      661 catccggtcg atcgtcatca cctggaagtc gcggtagctg ctctccaccc cggccccatt
      721 cctgaaattc attttccccg cgagcgccgc cgagaggccc caggtcactg cgctctcggt
      781 ctggccggcg atgccgagcg gattgagggc gaggccgcaa tccaccgcgg ccacgatccg
      841 gtgcacccgg agatccgagt agtcccgcgc cacgctcacc tcggcaacca tcgcgaggta
      901 ggtacctcgg tgatagacgt tcaccgcgac accgcgtccc caggtccggt cggaggactg
      961 cggcagcggc ttcccccagc ctgatctggt ccgcacatcg gcaaggactg cgcggagccg
     1021 gctccgatcg aggggccggc ggccggcggg cgccggatcg tccggcagca gcgagagccg
     1081 cagctcgatc ggatccttgc ccatcatctc ggccagctcg tcgaggaacg attcccgccc
     1141 gaagacggtg gagggatact ccaccgcccg ccacgggccg accggcaccg ggctggtcac
     1201 gtcgacacaa tcgaccagca gcgacggaaa gacgtagggg gtgtcgaacg ctccccaggg
     1261 gcttccatcc tcggcatagg aattctcggc ccggggcgcc ttgggcggat cgtcccagat
     1321 gttccgcccg ccgtgaatgt cgtagatggt gaggtccgag gcggaagagt ggtgcaccag
     1381 cgaggtcaga ctaccccctg cggtgagccc tgcctcgaag cgctcaatcg tcgccggctg
     1441 gaagtagccg aagcgcatgt cgtcctggcg gctccacagc acctgcaccg gccgtcgcgt
     1501 ttctttcgag agctgcaccg cctcggcgac aaagtcggcg aagagccgcc ggccgaaccc
     1561 gccgcccatc agcatgggat gcagggtgat cttctcttcg ggaagccccg tcacccgggc
     1621 cgccatggcc agcgtccgca catcggtctg ggttggcacc cagagctcgg cgcggtcggc
     1681 caggacgtgc gcggtgcagt tctgggtctc gagtggagcg tgagcctgga agggaaagag
     1741 gtaggtggcg gagtggcgtt tggccgaggc gctcagcgcc gcggcggcat cgccttcggc
     1801 acggacggga tagcggtgcc cctcgagcat cgtggggagc ttggagaggt actgctccga
     1861 gtcgaactgg gcggcggaac cgggggccca ctcgatcttg agctgggccc gtccccgtag
     1921 cgccgaccag gtgtcgtcgg ccaggacggc aactccctga tggacgcccg ctgtcaccgc
     1981 cttcaccgcg cgtacccccg gaaccttgcg ggccgccgcg tcatcgaagc gcaccagcac
     2041 gccgccgaga gtgggggcgc gctcgatcga ggcgtagagc atccccggca gcttc
//
LOCUS       DATIFF010000831         2177 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1028664, whole genome shotgun sequence.
ACCESSION   DATIFF010000831 DATIFF010000000
VERSION     DATIFF010000831.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2177
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1028664"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..920)
                     /locus_tag="VLD58_12200"
     CDS             complement(<1..920)
                     /locus_tag="VLD58_12200"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HSB55116.1"
                     /translation="MVRLFTLGGLALERDGQLLDGIANRKVLLALLALVAAERGIGRD
                     KLVAYLWPDSDESRGRNNLKQSLFGLRRELGAPVVVSSGGTLRLDPAAVSCDLADFEA
                     AVAAGDLATAAELYRGPFLDGFYLAERSELEHWMEGERYRLHRMYSEVLRGLGNEAET
                     EGDSAGAVRWWRLAAATEPYSAPVALGAMRALVAAGDRAGALEHARLYQSALRDEMGL
                     PPEPSVSQFAESLRAASPHGPRLTGGQEEATPLSPSLLLPALADGPIAVPAAPRRLRF
                     GWLTLVIPVLAALAVAVAVQVFRGSRSVPAV"
     gene            complement(993..1670)
                     /locus_tag="VLD58_12205"
     CDS             complement(993..1670)
                     /locus_tag="VLD58_12205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55117.1"
                     /translation="MSWKPTLKQSSRLLLACALVAATACQEKTGALTPEQQQRLDAEG
                     IVRRADDLIFRYTHDAGTREAGWEERRASIIVTRQSVIIHKNEKLGLEITPRTRRFVQ
                     VRRDGQRVRISAGGGGSAESGSGESGRHVPPNHLAKPGGGGSTRLDGPSCGRFLHWKA
                     PRGLRGRSPARNTECKNGGKNGCRASGSRAVLERTVRLLGQCQGRENRLPDHPTVYSG
                     IHYLQDG"
     gene            complement(1781..>2177)
                     /locus_tag="VLD58_12210"
     CDS             complement(1781..>2177)
                     /locus_tag="VLD58_12210"
                     /inference="COORDINATES: protein motif:HMM:NF014864.4"
                     /note="regulates arginine biosynthesis when complexed with
                     arginine by binding at site that overlap the promotors of
                     the arginine biosynthesis genes; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="arginine repressor"
                     /protein_id="HSB55118.1"
                     /translation="TRAIRTQEELAEALSAEGWEVTQSSVSRDIAALRLIKVEGAYRR
                     PSSVVVPADPDERRIADGVLTVEPAGEALVVLHTPPGEANRVAVALDRLAWPDVVGTI
                     AGDDTIFLAVKDGPAQRRVMGEVRKLTSG"
BASE COUNT          345 a          782 c          717 g          333 t
ORIGIN      
        1 actgcgggga ctgaccgtga accccggaac acctggaccg ctacggccac ggccagtgcg
       61 gccagcacgg gaatgacgag cgtcagccag ccgaaccgca gtcggcgcgg cgcagcgggt
      121 acagcgatag ggccatcggc cagggccggc aggagaagcg atggagacag gggggtcgct
      181 tcctcctgtc ccccggtgag gcgaggtccg tgcgggctgg ctgctcgaag agactcggcg
      241 aactgactga cggagggctc ggggggcagc cccatctcat ccctgagcgc cgactggtag
      301 agccgggcat gttccaatgc gccggccctg tcgccggccg caacgagcgc ccgcatcgcg
      361 ccgagcgcga cgggagcgct gtacggttcg gtcgccgccg ccaggcgcca ccagcggacg
      421 gcaccagccg agtcaccctc ggtttcggcc tcattaccaa gtccccgcaa gacctcgctg
      481 tacatgcggt gaagccggta ccgctcccct tccatccagt gttcgagctc cgagcgctcg
      541 gccagataga agccgtccag gaagggcccc cggtagagct cggcagcggt ggcaaggtct
      601 cccgcggcca cggcagcctc gaaatcagcc agatcgcagg agacggcggc aggatcgagc
      661 cgaagggtgc cgccggagga gacgaccacc ggcgccccga gctcccggcg caggccgaag
      721 agcgactgtt tgaggttgtt acggccccgc gactcgtcgc tgtcgggcca gaggtaggcg
      781 accagcttgt cacgaccgat cccccgctcg gccgcgacca gcgccaggag ggcgagcaac
      841 accttgcggt tggcaatgcc gtccagcagc tggccgtcgc gctccagcgc gaggccgccg
      901 agggtgaaca ggcgaaccat ggaacctgcc ggatgggtct ataaccgaaa actaaccgcg
      961 ggatatccgc gtgtcgctat gttagccggc cctcaaccat cctgcaaata atgaattccg
     1021 gaatataccg tggggtgatc cggcagccgg ttctcgcggc cttggcactg gccgagaagt
     1081 cgcaccgtac gctccagcac cgcgcgactt ccgctcgctc ggcatccgtt ctttccgccg
     1141 ttcttacatt cggtattccg cgccggcgat cgcccgcgca agcctcgtgg ggctttccag
     1201 tgcaaaaagc ggccgcagga ggggccgtca agacgggtcg agccgccccc accaggtttc
     1261 gcgaggtggt tcggcggaac gtggcggcct gactcaccgc ttccgctctc cgccgagccc
     1321 ccgccacccg cgctgatccg cacccgctgc ccatctcgcc gtacctggac gaagcgccgc
     1381 gtgcgcgggg tgatctccag tccgagcttc tcgttcttat ggatgatgac gctctgcctg
     1441 gtcacgatga tggaagccct gcgctcttcc catcctgcct cccgggtgcc ggcgtcgtgc
     1501 gtgtagcgga agatcagatc gtccgcccga cgcacgatgc cctccgcatc gagccgctgc
     1561 tgctgctcgg gcgtcagcgc gccggtcttc tcctggcatg cggttgcggc caccagcgcg
     1621 caggcgagga gaaggcggct cgattgcttc aaggttggct tccaggacat tgcaggttcc
     1681 tcgtggccag gacttcgcgg agtcatcccg agcgaagcgg aggagccatg cgccgggtct
     1741 tggccccttc gctgcgctca gggtgactcg atgtcggcca tcacccgctc gtcagcttcc
     1801 gcacctcacc catcacccgc cgctgcgcgg gaccgtcctt caccgccagg aatatggtgt
     1861 cgtcgcccgc gatggtcccg acgacgtcgg gccacgccag gcggtcgagc gccaccgcca
     1921 cgcggttggc ctcgccgggt ggcgtatgga gcacgacgag cgcctcgccc gcgggctcca
     1981 ccgtcagcac gccgtcggcg atccgccgct cgtcgggatc ggccggcacc accaccgacg
     2041 agggccggcg atacgcgccc tccaccttaa tcagccgcag cgccgcgatg tcgcggctca
     2101 ccgacgactg cgtcacctcc cacccctcgg ccgacagcgc ctcggccagc tcttcctggg
     2161 tgcggatggc ccgggtg
//
LOCUS       DATIFF010000832         2423 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1028719, whole genome shotgun sequence.
ACCESSION   DATIFF010000832 DATIFF010000000
VERSION     DATIFF010000832.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2423
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1028719"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..702
                     /locus_tag="VLD58_12215"
     CDS             <1..702
                     /locus_tag="VLD58_12215"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSB55119.1"
                     /translation="HGKLLNAGQTCVAPDYALVPEAEAEGFAAAFAEQASRLYPRLLD
                     NPDYTSIVSGPHRERLAALVEDARAKGARVIEINPAGEDFGRQPGRKFPPTLLLGTTD
                     EMTVMQREIFGPILPVRPYRDIAEAIAYINARPRPLALYYFDEDRERQRTVLAHTTSG
                     GVSINDTLLQYLQEDLPFGGIGSSGMGAYHGREGFLLFSHCKAVFRQSRLNLADLLRP
                     PYKERVATLVAALMR"
     gene            719..1468
                     /locus_tag="VLD58_12220"
     CDS             719..1468
                     /locus_tag="VLD58_12220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55120.1"
                     /translation="MRRLVLFGAPVLLGLVNLAHPVLAPPVYDAVLGHLPWWVRLHLL
                     NLALFPLFALAGWLLLRDVKNAAATVSRVALAVFVPLYCGFDAAIGIGTGVLVEQARQ
                     LPAAQTATASHMIDGYWGSGALQGLAVAGSIAWVASMLAAAVALSAPDRRRLTAIAAV
                     VVFGITGWARSQLFQAHGSPTIRPAWWLVTIATALLMAAVARPRAPAALLALAGSLFG
                     ATHVPPTGPMGAACFLGAAALLEHGSDRTDA"
     gene            complement(1536..2051)
                     /locus_tag="VLD58_12225"
     CDS             complement(1536..2051)
                     /locus_tag="VLD58_12225"
                     /inference="COORDINATES: protein motif:HMM:NF018232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1097 domain-containing protein"
                     /protein_id="HSB55121.1"
                     /translation="MSQLVALSVSIGVLGGIATILYLKVGLLIWAGFIAWACFFHAGG
                     DANAFKTTVVCNLFGAVCAWVAALLILSPMTAALSTPVWAGIIVGLTVFVLCLGAHIK
                     AFSSIPASVYGYASVFAFLLGNMSENMTKEKLMSGSMANALILVFVSMLIGAIFGMVS
                     GKVGAALTKKA"
     gene            2212..>2423
                     /locus_tag="VLD58_12230"
     CDS             2212..>2423
                     /locus_tag="VLD58_12230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55122.1"
                     /translation="MTRSRPLLAAFFRAMLPLMLAAAPVAAQQRPDPGKPGDEAVRRA
                     VEYLRINTTNPPGNEDQAMRFFARILA"
BASE COUNT          383 a          866 c          803 g          371 t
ORIGIN      
        1 cacggcaagc tcctgaacgc gggccagacc tgcgtcgccc ccgactacgc gctggtcccg
       61 gaggcagagg ccgagggctt cgccgccgcc ttcgccgagc aggcgtcccg gctgtacccc
      121 cgcctgctcg acaatcccga ctacacctcc atcgtgagcg ggccgcatcg cgagcggctc
      181 gcggcgctgg tcgaggacgc ccgggccaag ggcgcgaggg tcatcgagat caatcccgcc
      241 ggcgaggact tcggacggca gccgggccgc aagtttcctc ccacgctcct gctcggcacc
      301 accgacgaga tgacggtcat gcagcgcgag atcttcgggc cgatcctgcc ggtgcggccc
      361 taccgggaca tcgccgaggc gatcgcctac atcaacgccc ggccccggcc gctggcgctg
      421 tactatttcg acgaagaccg ggagcggcag cggacggtgc tcgcccacac cacctccggc
      481 ggcgtgagca tcaacgacac cctgctccaa tacctccagg aagacctgcc gttcggcggc
      541 atcgggtcga gcgggatggg cgcctaccac ggacgggagg ggttcctgct gttcagccac
      601 tgcaaggcgg tgttccggca gtcgaggctc aacctcgccg acctgctccg cccgccctac
      661 aaggagcggg tcgcaaccct cgtcgcggcg ctcatgcggt gaggggaagg cgcaaccgat
      721 gcgacgcctg gtcctgttcg gcgcgcccgt actgctcggg ctggtcaacc tggcccaccc
      781 ggtgctcgcc cctcccgtct acgacgcggt gctcgggcac ctgccctggt gggtgcggct
      841 ccatctcctc aacctcgcgc tcttcccgct gttcgcgctc gccggctggc tgcttctccg
      901 ggacgtcaag aacgccgccg ccaccgtgag ccgggttgcg ctggcggtct tcgtaccgct
      961 ctactgcggg ttcgacgccg ccatcgggat cggaaccgga gtgctggtcg agcaggcccg
     1021 gcaactgccg gccgcccaga ctgcgaccgc cagccacatg attgacggct actgggggag
     1081 tggcgccctg cagggactcg cggtcgcggg atcgatcgcc tgggtggcga gcatgctggc
     1141 ggcggcggtc gccctcagcg ctccggatcg ccgccggctc acggccatcg cggccgtcgt
     1201 ggtcttcggc atcaccggct gggcccggag ccagttgttc caagcccacg gcagcccgac
     1261 catccggcct gcatggtggt tggtgacgat cgccacggcg ctgctcatgg ccgccgtcgc
     1321 cagaccccgc gcccccgcgg ccctgctcgc attggcgggg tccttgttcg gggccaccca
     1381 cgtgcctccc accggcccga tgggcgcggc ctgctttctc ggggccgcgg ccctgctcga
     1441 gcacggctcc gatcgaacgg atgcttgaag gatggagacc aagggcgtcc ccgcgccggg
     1501 cccacgggcc cggcgtgggg gtgccgcaag ctgcgtcagg ccttcttggt gagggcggct
     1561 ccgaccttgc cggagaccat cccgaaaatc gccccgatca gcatcgagac gaacaccagg
     1621 atgagcgcgt tcgccatgct gccggacatg agcttctcct tcgtcatgtt ctcggacatg
     1681 ttcccgagca ggaaggcgaa cacggacgca tagccgtaca cgctggccgg gatgctcgaa
     1741 aaggccttga tgtgggcccc caggcagagc acgaacaccg tgaggccgac gatgatgccg
     1801 gcccagaccg gcgtggacaa cgcggcagtc atgggagaca ggatgagcag cgcggccacc
     1861 caggcgcaga ccgccccgaa caggttgcag acgaccgtgg tcttgaaggc gttggcgtcg
     1921 ccgcccgcat ggaagaagca cgcccacgcg atgaacccgg cccagatgag caggcccacc
     1981 ttgaggtaca gaattgttgc gattcccccc aggaccccga tactgaccga cagcgcgacg
     2041 agttgcgaca tcgtgatgcc tccctcgtgt tgactgagcc ggatgcgtga cgcatcacac
     2101 cccgggctcg ggggagtgat ggcgtcggaa acgtctaagg ggcaggtttc atgtagcact
     2161 tggggaccgg attgtcaaat cttgatccac cttcgacata ggaagtcctc gatgacccgc
     2221 agccgcccgc tgcttgccgc cttctttcgt gcaatgctcc cactcatgct ggcagcggcc
     2281 cccgtcgccg cccagcagcg cccggacccg ggcaagccgg gggacgaggc ggtccggcga
     2341 gcggtagagt acctgcggat caacaccacg aatccgccgg gcaacgagga ccaggccatg
     2401 cggttctttg cccgcatcct ggc
//
LOCUS       DATIFF010000833         2257 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_259791, whole genome shotgun sequence.
ACCESSION   DATIFF010000833 DATIFF010000000
VERSION     DATIFF010000833.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2257
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_259791"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..334
                     /locus_tag="VLD58_12235"
     CDS             <1..334
                     /locus_tag="VLD58_12235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type IV pili twitching motility protein PilT"
                     /protein_id="HSB55123.1"
                     /translation="GVITQTLLQRSRGKGRCMACEIMVATPAIRALIRDDKVHQIYSA
                     LQSGKKHGMQTMVDALYQLYMNREVSKEERLRAAPDANEFLRAIGEKPLEELAIGAME
                     KASPAGRR"
     gene            356..1564
                     /locus_tag="VLD58_12240"
     CDS             356..1564
                     /locus_tag="VLD58_12240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HSB55124.1"
                     /translation="MAVFEYTAKNATSGQILKGTMDVPSRDEVIAFIRKNRMILVSVR
                     EQPAQLTLRIPGTGGIKTRDVVIFTRQFATMINAGLPLVQSLTILAQQTENKALKDVT
                     KQVVYDVEAGNTLADALGKHPRAFTDLYVNMVAAGEAGGILDTILLRLATFLEKNDAL
                     VRKVKGAMVYPAVIISVAVIAIAVLLIFVIPTFQSMFASVQMELPLPTRIVIGASRIL
                     TRYWYFIIGAIVLVVFSFRSYYSTPAGRKAIDGAMLRAPIIGDLLRKSAVSRFTRTLG
                     TLISSGVSILDGLEITAKTAGNRVIHDAVMSSRQSIAGGETIAGPLQASGVFPPMVIS
                     MISVGEQTGGLDEMLAKIADFYDSEVDVAVSALLSLMEPIMIVVLGVIVGGMVVAMYL
                     PIFDMVNAVQ"
     gene            1597..2211
                     /locus_tag="VLD58_12245"
     CDS             1597..2211
                     /locus_tag="VLD58_12245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55125.1"
                     /translation="MNRAAQGLIFAGLAVGMAASLQAQDAAPRTHAVELTLAAGFFQP
                     TGTSGTTGGSTPILLTRRPAPAGSLHLSFNPPSGVFAVDFSGGYAPEGLRQQAAGAAG
                     KSHTNLSFASAKLMIGRSPRKPGVSYLIGAGFGIEHRKKSVLDPAVSATNAGPAVSAM
                     IRIPIDGQVGLRLDAEDLIYQADWGYGKKTRNDFILSAGLSIAW"
BASE COUNT          379 a          777 c          738 g          363 t
ORIGIN      
        1 gggggtcatc acccagacgc tgctgcagcg ttcccgcggc aaggggcgct gcatggcgtg
       61 cgagatcatg gtcgccacgc ccgccatccg ggcgctgatc cgcgacgaca aggtgcacca
      121 gatctactcc gcgctccagt ccggcaagaa gcacgggatg cagacgatgg tggacgcgct
      181 ctatcagctg tacatgaacc gggaagtgtc caaggaggag cgtctccgcg ccgcgccgga
      241 cgcgaacgag ttcctgcgcg ccatcggcga gaagccgctc gaggaactgg cgatcggagc
      301 gatggaaaag gcgagtccag ccggccgccg ttaaccggga cagaggatac cagccatggc
      361 cgtattcgag tacaccgcga agaacgccac cagcgggcag atcctgaagg gcacgatgga
      421 cgtcccctcg cgggacgagg tcatcgcgtt catccggaag aaccggatga ttctggtgag
      481 cgtccgggag cagcccgccc agctcaccct caggattcca ggcaccggcg ggatcaagac
      541 gcgcgacgtc gtgatcttca cccgccagtt cgccacgatg atcaacgccg gcctgccgct
      601 ggtgcagtcg ctcaccattc tggcccagca gaccgagaac aaggcgctca aggacgtcac
      661 caagcaggtg gtgtacgacg tcgaggccgg caacacgctg gccgacgccc tcggcaagca
      721 ccccagggcg ttcaccgacc tctacgtcaa catggtggcg gcgggtgagg cgggcggtat
      781 cctggacacg attctcctcc ggctggccac cttcctcgag aagaacgacg ccctggtgcg
      841 caaggtgaag ggcgccatgg tgtacccggc ggtgatcatc agcgtcgccg tgatcgcgat
      901 cgcggtgctc ctcatcttcg tcatcccgac gttccagtcg atgttcgcct cggtgcagat
      961 ggagctcccg ctgcccaccc ggatcgtcat cggcgcctcc cgcatcctca cgcggtactg
     1021 gtacttcatc atcggcgcga tcgtgctggt ggtgttctcc ttccggtcct actacagcac
     1081 gccggcgggg cggaaggcca tcgacggcgc gatgctccgc gcccccatca tcggcgacct
     1141 gctccggaag tccgccgtca gccgcttcac gcggaccctg ggcaccctga tctcgtcggg
     1201 cgtgtcgatc ctcgacggtc tcgagatcac cgccaagacg gccggcaacc gggtgatcca
     1261 cgacgcagtc atgagctccc ggcagtccat cgccggcggc gagacgatcg ccggaccgct
     1321 gcaggcctcg ggcgtcttcc cgccgatggt catctcgatg atctccgtcg gcgagcagac
     1381 cggcggcctc gacgagatgc tggccaagat cgccgatttc tacgattccg aagtggacgt
     1441 ggcggtgagc gcgctgctgt cgctcatgga gccgatcatg atcgtggtgc ttggtgtcat
     1501 cgtcggcggc atggtcgttg ccatgtacct gccgatcttc gacatggtca acgcggtcca
     1561 gtaatcgggc atctcagcgc ccgggaaggg tcgttcatga atcgcgctgc acagggactg
     1621 attttcgcgg ggctcgcggt cggcatggcg gcgtcgctcc aggcgcagga cgccgccccg
     1681 cgcacccatg cggttgagct caccctcgcg gccggcttct tccagccgac cggtaccagc
     1741 ggcaccacgg gggggagcac tccgatcctg ctcacccggc gcccggcgcc ggcggggagt
     1801 ctgcacctct cgttcaaccc cccgtccggc gtcttcgccg tcgatttttc gggggggtac
     1861 gcgcccgagg ggctccgcca gcaggcggct ggcgcggccg ggaagtcgca tacgaacctc
     1921 tcctttgcca gcgccaagct catgatcggg cgctcgcccc ggaaacccgg cgtgtcgtac
     1981 ctgatcggcg ccggcttcgg gatcgagcac cgcaagaaga gcgtcctcga cccggcggtg
     2041 agcgccacca acgcgggccc ggcggtgagt gccatgatcc ggattcccat cgacgggcag
     2101 gtcggactgc gcctcgatgc cgaggacctg atctaccagg ccgactgggg ctatggaaag
     2161 aagacccgca acgacttcat cctgagcgcg ggcctcagca tcgcctggta gctccgcgcc
     2221 cggccgacac cacgcccggc tccctgcgag gggggcc
//
LOCUS       DATIFF010000834         2001 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_411787, whole genome shotgun sequence.
ACCESSION   DATIFF010000834 DATIFF010000000
VERSION     DATIFF010000834.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2001
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_411787"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..355
                     /locus_tag="VLD58_12250"
     CDS             <1..355
                     /locus_tag="VLD58_12250"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB55126.1"
                     /translation="TWLVIRKDTKESVGSVGFGGGPDEDGGVMIGYATYPNVEGRGFA
                     TEAAGELARWALAQPGVTRVCASLPPENERAIRVAEKLGMKRVGTVWEEDLDEVLLYA
                     LQAGKSEKGEVTSKK"
     gene            complement(396..1952)
                     /locus_tag="VLD58_12255"
     CDS             complement(396..1952)
                     /locus_tag="VLD58_12255"
                     /inference="COORDINATES: protein motif:HMM:TIGR00924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HSB55127.1"
                     /translation="MATAAAPTSAQPVAVPADHGFFGHPRGLSTLFFTEFWERFSYYG
                     MRAILILFMTAPLAVGGLAFDTAKAGVIYGTYTALVYLTALPGGWLADRFLGQRRATL
                     YGGVLIMLGHICLAVPALTSFYLGLGSIVCGTGLLKPNVSTMVGKLYGAEDGRRDAGF
                     SIFYMGINLGALVSPFVCGWLAQSEQFRRILHGVGLRPESAWHWGFAAAAVGMFFGIL
                     QYLAGWKYLGNAGMNPVVPDDPAEQARNRRRLRNGVVGLLALVAGIAVVGRLGIVHVT
                     PEGLGRAFGVGLVAVTVLFFAGLLGAPGWTSGERKRLITILVLFLAAAIFWAVFEQQG
                     STLNLFAERSTDNRVFGIGFPASWFQSAEPIFIVLLAPAFAWLWVRLGKRDPSSPAKF
                     AVGLVFVAAGFGVLAVAARLASTGVKVSPLWLTTTYLLETIGELCLSPVGLSAMTKLA
                     PARVAGLMMGVWFLADAVGNYLGGRVASLYEAVALPILFSGVALFALAAGVGLALLVK
                     PIARMLASEK"
BASE COUNT          380 a          686 c          680 g          255 t
ORIGIN      
        1 gacctggctg gtgatccgaa aggatacgaa agaatccgtc ggctcggtcg ggttcggcgg
       61 cgggcccgac gaggacgggg gggtgatgat cggctacgcc acctacccaa atgtcgaggg
      121 ccgcgggttc gcgaccgagg ccgcggggga gctggcccgc tgggccctgg cgcaacccgg
      181 cgtcacgcgc gtctgcgcca gcctgccgcc ggagaacgag cgcgccatcc gggtcgcgga
      241 aaagctgggc atgaagcggg tggggacggt gtgggaggag gacctggatg aggtgctgct
      301 gtacgccttg caagcgggga agagtgagaa gggagaggtg acgagcaaga agtgagaagg
      361 aagacgcgcc ctgctcactt cttccgtctc acgtatcact tctcgctcgc cagcatcctc
      421 gcgatgggct tcaccagcag cgccagtccc acccccgccg ccagcgcgaa caaggccacc
      481 ccgctgaaca ggatcggcag cgcaactgcc tcgtacagac tcgccacccg cccgcccagg
      541 tagttcccca ccgcgtccgc caggaaccag acccccatca tgagcccggc cacccgggcc
      601 ggcgcgagct tggtcatggc gctcaggccg actgggctca gacacagctc gccgatggtc
      661 tccagaaggt aggtcgtcgt gagccagagc gggctcacct tcacccccgt cgaagccagt
      721 ctggcggcga cggcgaggac cccgaatccc gcggcaacga aaaccagccc gaccgcgaat
      781 ttcgccgggc tcgacgggtc ccgcttcccc agccgcaccc acagccaggc gaaagccgga
      841 gcaagcagaa cgatgaaaat cggctcggcc gactggaacc agctggcggg gaatccgatc
      901 ccgaacaccc ggttgtcggt gctccgctcg gcgaacaggt tgagcgtcga gccctgctgc
      961 tcgaataccg cccagaagat cgccgccgcg agaaagagca cgaggatcgt gatcagccgc
     1021 ttccgctccc cgctggtcca cccgggcgcg cccaggaggc ctgcgaagaa gagaacggtc
     1081 acggcgacca ggcccacgcc gaacgcgcgg cccaacccct cgggcgtcac gtggacgatc
     1141 ccgagccgcc ccacgaccgc gatgccggcg acgagcgcca gcaggccgac gacgccgttc
     1201 cggagccggc gacgattgcg ggcctgctcc gccggatcgt cgggcaccac cgggttcatg
     1261 ccggcgttgc ccagatactt ccagccggcg agatactgca ggatgccgaa gaacatcccc
     1321 accgctgcgg ccgcgaagcc ccaatgccac gccgactccg gtcggagccc cactccgtgg
     1381 aggatcctgc ggaactgttc actctgcgcg agccagccgc agacgaacgg cgataccagt
     1441 gcaccgaggt tgattcccat atagaagatc gagaagccgg cgtcccggcg cccgtcctcg
     1501 gcaccgtaca gcttcccgac catcgtgctc acgttcggct tgagcagccc ggtgccgcag
     1561 acgatgctgc cgagccctag atagaagctg gtcaaggcgg gcacggcgag gcagatgtgg
     1621 cccagcatga tcagcacccc gccgtacagc gtcgcgcggc gctggccgag gaagcggtcg
     1681 gccagccacc cgcccggcag cgcggtgaga tagaccaggg ccgtgtaggt gccgtagatc
     1741 acgccggcct tggccgtgtc gaacgcgagc ccgccgacgg cgagcggcgc cgtcatgaac
     1801 aggatgagaa tggcccgcat cccgtagtag ctgaaccgct cccagaactc ggtgaagaag
     1861 agcgtcgaga ggccgcgggg atggccgaag aaaccgtggt cggcggggac ggcgacgggc
     1921 tgagcgctgg tcggggcggc ggcggtggcc aagcgatcgc tcctcaggtt cgatggttct
     1981 tcaggatgtc gtccagcacg a
//
LOCUS       DATIFF010000835         4293 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1182862, whole genome shotgun sequence.
ACCESSION   DATIFF010000835 DATIFF010000000
VERSION     DATIFF010000835.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4293
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1182862"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..1226
                     /locus_tag="VLD58_12260"
     CDS             171..1226
                     /locus_tag="VLD58_12260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55128.1"
                     /translation="MENWLRQALDDAREAIRLDSANYNAYGELLDGLALAGDQGEART
                     VYDASRRAYPGSHYLAHLFIKRLEPRWGGSYEAMNAFAAEIAADSLINPRLRTFLGAA
                     ENDIADMAIGRDSIMMALRHANASLRYGPELYYLVDRGHANAHFGDYARAITDLNAVL
                     AQWPHFVPALENHAEAISYSAFYVRGGERSIVLKELISQYQLILSLEPANTWARNGLK
                     DALYELATCPEFAPECGNSQAGVVSVVQSVWRDIRWLLGYLGVAGFISWRAYLRWAKS
                     GFYLPRYVHLIALLALLTIGYIQRLWVLTGAPMTLRRWVVTATLPLLVYILFIGLGGA
                     RHAQQARAPAPPAPRKP"
     gene            complement(1238..1492)
                     /locus_tag="VLD58_12265"
     CDS             complement(1238..1492)
                     /locus_tag="VLD58_12265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55129.1"
                     /translation="MSQSTVSIATLAPVPDEPAHFDGPSLPPPPPHLAQGAKGLGPLP
                     GASLRVSTLPQRYLLVALIPVVLGVLFTLVSLMVRWPGVP"
     gene            complement(1489..2244)
                     /locus_tag="VLD58_12270"
     CDS             complement(1489..2244)
                     /locus_tag="VLD58_12270"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HSB55130.1"
                     /translation="MPRVIRASAASLCGPTRGRNEDMAVLGGRCVRDASYAMDWVREG
                     ATRPFLAGVLDGLGGHQGGDQASALVAERLAATVWRWWTGCSAQELSDGLVQTLTDAH
                     RELAELGREDPTKAGCGTTCTAMVASAEALVLLHVGDSRCYRRRDGLWKQLTQDHSVA
                     MPDGTGQRITRLIYAVGADLPELPPDMVEDLTEKCFPGDVYLLMSDGVLAAAGEDRFE
                     AACNAESAERILELALANGGPDNATVVRLELAE"
     gene            complement(2247..2915)
                     /locus_tag="VLD58_12275"
     CDS             complement(2247..2915)
                     /locus_tag="VLD58_12275"
                     /inference="COORDINATES: protein motif:HMM:NF012708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HSB55131.1"
                     /translation="MLTLAPCPHCASRVPDDGAFCDSCGKQLAACPTCGELAKPGEKC
                     VKHGVSATVRPSLAPGPQPSTAPVVGPTVMPPPRSRGGAAPAPVVPPAPVQPAGPSHG
                     AQATTVQQLARRLRLVIASGEPLAPLEVDSGTVVGRGDGPFAVLLDQFHNKGVSRRHC
                     QFQRTPTGGWTITDLAGKGSTWVSPDGSFATGPMTPNGTVPLEAGRDQVRIGLLTFRV
                     EAIP"
     gene            complement(2909..>4293)
                     /locus_tag="VLD58_12280"
     CDS             complement(2909..>4293)
                     /locus_tag="VLD58_12280"
                     /inference="COORDINATES: protein motif:HMM:NF012234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSB55132.1"
                     /translation="QTSGRVNDAIDRARGGVLFIDEAHQMADAGGNTFQREILNTMLP
                     RLENERGQFLCVLGGYTSSLPAVLALDQGMASRFPEHYRIQLNNYDADTLSSIYLTMA
                     RDATKTLTPEAEQRMRQLMRLLRRWALPAFANARGAREFLNACIARQVARVGADPSAD
                     RNLLIEDDIKLPRSATGKSPEAALAEAEQKLSALVGQPQLRSVINRLRGNLLLWRAEL
                     EEGADVAPPLEHILLQGSPGTGKTTVARIMGSLLYGLGMLPRPHVEEVRGTELIKGIQ
                     GAAAQAVRELVERAIGGVLFLDEVSGLIGQPQGVDVARELLPHLVDAKGRFVMIVAGY
                     PHVVDGFLKLDDGLARRFGTVLELEDYSPEEVHGIAERAAKDAGLTLTPEANAALLAL
                     LKSPRAAELLPSRNAGMAHTLISAMRDRLASRLAPRLAQNLGAVSTEERRTILAEDVP
                     AGFDARGNAC"
BASE COUNT          659 a         1569 c         1403 g          662 t
ORIGIN      
        1 ccttcgcgga ccctgatacc gccgttggaa ccgcgctcac gcgctggatg acagccgttc
       61 cgggatcggc ccgggcacgg tccgctctgg cgacctggca cctcgccaag gcttgggccg
      121 cccggggcga cggatcaggc agtagcgtct ctcccagcgc agcagccgag atggaaaact
      181 ggcttcgaca ggcgctggat gatgcccgcg aggccatccg actcgactcc gccaactaca
      241 acgcctatgg tgaactgctg gacgggctgg cactggccgg cgaccagggc gaggctcgca
      301 cggtgtacga cgcctcgcgg cgggcctatc ccggcagcca ttacctggcc cacctgttca
      361 tcaagcggct cgagccccgc tggggcggca gctacgaggc gatgaatgcc ttcgccgccg
      421 aaatcgcggc cgacagcctc atcaatcccc ggcttcgcac ctttcttggc gccgccgaaa
      481 atgacatcgc cgatatggca atcggccgcg acagcatcat gatggccctc cggcatgcca
      541 atgcctcact caggtacgga ccggagctct actacctcgt cgaccgggga cacgccaacg
      601 cccacttcgg cgactacgcc cgagccatca ccgacctcaa cgcggtgctg gcccagtggc
      661 cgcatttcgt cccagcgctg gaaaaccacg ccgaggcgat ttcctactcg gccttctacg
      721 tccgcggcgg cgagcgcagc atcgtcctca aggagctcat cagccagtat cagctgatac
      781 tctccctcga acccgccaac acctgggccc ggaatgggct caaggacgcc ctctacgaac
      841 tcgcgacctg tcccgagttc gctcccgagt gcggcaacag tcaggcgggc gtggtcagcg
      901 tggtgcagtc ggtatggcgg gacatccgct ggctgctggg ctacctcgga gtcgcggggt
      961 tcatcagctg gcgggcctac ctgcggtggg cgaagagtgg attctacctg cccaggtacg
     1021 tccacctcat cgcgctgctg gcgctgctca cgatcggcta catccagcgc ctctgggtgc
     1081 tgacgggcgc gcctatgacg ctccggcgat gggtcgtgac cgccactctc cccctgctgg
     1141 tctacatcct cttcatcggc cttggcggag cccgtcacgc gcagcaggcc cgggcaccgg
     1201 cacctcctgc gccacgcaaa ccatagcccg gcgccactca gggcacgccg ggccagcgca
     1261 ccatcagcga caccagggtg aacagcacgc ccagcaccac aggaatcagg gcgaccagca
     1321 gatagcgctg cggcagcgtg gacacccgga gcgaggcccc gggcagcggt ccgagtccct
     1381 tggcgccctg cgccaggtgt ggtggcggcg gcgggagcga cggcccgtcg aagtgcgccg
     1441 gttcgtccgg caccggcgcc agggtcgcta tcgagacagt tgattggctc attcggccag
     1501 ctccagtcgt accacggtgg cattgtcggg accgccattc gccagcgcaa gctccaggat
     1561 gcgctcggcg ctctccgcat tgcacgctgc ttcgaaccga tcctctcccg ccgcggcgag
     1621 caccccgtca ctcatcagca gatacacgtc gccggggaag cacttctcgg tgagatcctc
     1681 gaccatgtcg ggtggcagtt ccggcaggtc ggcgccgacg gcgtagatca ggcgggtgat
     1741 gcgctgcccg gtgccatcgg gcatggcgac cgagtgatcc tgggtgagct gcttccacag
     1801 gccgtcgcgc cggcgatagc agcggctgtc ccccacatgc agcagcacca gcgcctcggc
     1861 cgacgccacc atcgcggtgc aggtcgtccc gcaacccgcc ttggtgggat cttcccgccc
     1921 caactcggcc agctcccggt gcgcgtcggt caacgtctgc accagcccgt ccgacagctc
     1981 ctgggccgag cacccagtcc accagcgcca cacggtcgcg gccagccgct ccgcgacgag
     2041 ggcactcgcc tggtcgccgc cctggtgtcc gccgaggccg tcgagcacgc cggcgagaaa
     2101 agggcgggtg gcgccctcgc gcacccaatc catcgcgtag ctggcatccc gcacacaccg
     2161 tccacccagc accgccatgt cttcattgcg gccgcgggtc ggtccgcaga gcgatgcggc
     2221 gctggcgcga atgacccgcg gcatcgtcat gggatggcct cgacccggaa ggtgaggagc
     2281 ccgatccgga cctggtcgcg gccagcctcg agcggcacgg ttccgttcgg cgtcatgggg
     2341 ccggtggcga agctgccgtc ggggctcacc caggtgctgc ctttccccgc gagatcggtg
     2401 atggtccatc ctccagtcgg cgtccgctga aactggcagt gccttcgcga cacacccttg
     2461 ttgtggaact gatcgagcag gacggcgaag ggaccatcgc cgcgccccac caccgttccg
     2521 gaatcgacct cgagcggcgc cagcggttca ccgctggcaa tcaccagccg gagccggcgc
     2581 gccagctgct gcaccgtggt ggcctgagcg ccgtggctcg gaccggcggg ttgcaccggc
     2641 gctggcggca ctactggagc cggcgccgct ccacctctgg agcgaggcgg cggcatcacg
     2701 gttgggccca ccaccggcgc cgtcgacggt tgcggacccg gcgccagcga cggccgtacc
     2761 gtcgcgctca ccccatgctt gacgcacttc tcacccggct tggccagctc gccgcaggtg
     2821 gggcaggccg cgagctgctt gccgcagctg tcacaaaacg ccccgtcatc cggcacccgg
     2881 ctggcgcaat ggggacacgg cgccagcgtc agcatgcatt cccccgggcg tcgaacccgg
     2941 ccggcacatc ctcggcgaga atggtccgcc gctcctcggt agacaccgcg cccaggttct
     3001 gcgccagccg cggcgccagt cggctcgcga gacggtcgcg catcgcgctg atcagggtat
     3061 gcgccatccc ggcgttccgg ctcggcagga gctctgcagc gcggggactc ttgagcagcg
     3121 ccaggagtgc ggcattggcc tctggcgtca gcgtgaggcc cgcgtccttc gccgcccgct
     3181 cggcaatgcc gtgcacttcc tcgggcgagt agtcctccag ctcgagcacc gtcccgaagc
     3241 gccgggccag tccgtcatcc agcttgagga agccatccac cacgtgcggg taccccgcca
     3301 cgatcatcac gaagcgtccc ttggcatcga ccagatgggg gagcagctcg cgcgccacat
     3361 cgacgccctg cggctggccg atgagcccgc tcacctcgtc gaggaagagt accccgccga
     3421 tcgcccgctc gaccagctcg cgcaccgcct gggcagccgc gccctggatc cccttgatga
     3481 gctccgtgcc gcgcacctcc tccacgtgcg gccggggcag catgccgagt ccgtagagca
     3541 gtgagcccat gatccgggcg acggtggtct tgccggttcc cggactgccc tggaggagga
     3601 tatgctcgag cggcggagcc acatcggccc cctcctcgag ctcggcccgc cagaggagca
     3661 gattgcctct cagccggttg atcacgctcc gaagctgcgg ctgtcccacc agcgccgaga
     3721 gcttctgctc cgcttcggcc agggcagctt cgggactctt gccggtcgcc gagcggggca
     3781 gcttgatgtc gtcctcgatc agcaggttcc gatcggccga gggatcggcg ccgacgcggg
     3841 ccacctggcg ggcgatgcag gcgttcagga attcccgggc gccccgcgca ttggcaaagg
     3901 ccgggagggc ccagcgccgc agcaggcgca tgagctgccg catccgctgc tccgcctcgg
     3961 gcgtgagcgt cttggtcgca tcacgcgcca tggtgaggta gatcgacgag agcgtgtcgg
     4021 cgtcgtagtt gttgagctga atccggtagt gctccgggaa ccggctcgcc attccctgat
     4081 cgagcgccag caccgccgga aggctcgagg tgtaaccccc caggacgcag aggaactgtc
     4141 cccgctcgtt ctcgagccgg ggcagcatgg tgttgaggat ctcccgctgg aaggtgttcc
     4201 cgcccgcgtc tgccatctgg tgggcttcgt cgatgaagag caccccgccc cgggcccggt
     4261 cgatcgcgtc gttcacccgg cccgacgtct ggc
//
LOCUS       DATIFF010000836         2273 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_566919, whole genome shotgun sequence.
ACCESSION   DATIFF010000836 DATIFF010000000
VERSION     DATIFF010000836.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2273
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_566919"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1220
                     /locus_tag="VLD58_12285"
     CDS             <1..1220
                     /locus_tag="VLD58_12285"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB55133.1"
                     /translation="SLATNEAMLRQAQKMEAIGQLAGGVAHDFNNILGAIMMQASLAQ
                     GEPGGSAELTEALEEIRHAAERGANLTRQLLLFSRKQVIQPRVLDLNEVVTSLARMLQ
                     RMLGEDVRMELILHPGPLCNRADAGMIDQVLMNLAVNARDAMPGGGRLIIETLVEDLT
                     SGDSDLPEVLPGKYASMKVSDTGTGIAPEALPHIFEPFFTTKAVGKGTGLGLATAFGI
                     VQQHRGTMRVTSSPGKGTTFEVLLPLTAPETDQEEAVAAPASRRKVAGQIMVVEDDTV
                     VRNLLRQALEREGYRVLSAAHGPEALRLWQDRRARLDLLLTDIVMPEGISGPELAARL
                     QAQDSTLKVIYTSGYTADLAPRGLRLEEGVNFLQKPVALDHLLETVGRVLDGPARNQR
                     GPTDSAGVPRQPE"
     gene            complement(1183..2091)
                     /locus_tag="VLD58_12290"
     CDS             complement(1183..2091)
                     /locus_tag="VLD58_12290"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSB55134.1"
                     /translation="MLLALLALLSAPDTAVVRDVQVAPDEILRTTSIGSGEPVVFIPG
                     IFGGAFGFRHVTSRLAEMGYRCVVVEPLAFGSSSHPSKADYSFAAQADRIGQVLDSLG
                     VTSALIVAQSSGAAMAYRLAYRRPELLRGILSIEGGPAETPATPGLKHALRFGGFLTK
                     LFVGPGTIRSRVRHDLIENSGDTTWVTSAVLDEYTVGQASDVHGTIDALRAMSKAQEP
                     ESLRDRLHEARIPIRLLVGSVDHPAGIKEDGLTQLHQSLVDFAVDSVAGSGQYVGEEQ
                     PQAVIDAVLRLAEASTPVVVVHPPNQ"
BASE COUNT          389 a          736 c          808 g          340 t
ORIGIN      
        1 gttcgctcgc gaccaacgag gcgatgctgc ggcaggccca gaagatggag gcgatcggcc
       61 agttggccgg cggcgtcgcg cacgacttca ataacattct cggcgccatc atgatgcagg
      121 ccagcctggc ccagggcgag cccgggggat cggccgagct gaccgaggcg ctcgaggaga
      181 tccgccacgc ggccgagcgg ggggccaatc tcaccaggca gctgctgctc ttcagccgga
      241 agcaggtgat ccagccgcga gtgctcgatc tcaatgaggt ggtgacgagc cttgcccgga
      301 tgctgcaacg gatgctcggg gaagacgtcc gcatggagct gatccttcat ccggggccgc
      361 tctgcaacag ggccgacgcc ggcatgatcg atcaggtgct catgaatctc gcggtgaacg
      421 cgcgcgatgc gatgccgggc gggggccggc tgatcatcga gacgctcgtg gaggacctta
      481 cctccggtga ctccgacctc ccggaggtgc tccccgggaa gtatgccagc atgaaggtgt
      541 cggacacggg caccggcatt gccccggagg ctctgcctca catcttcgag ccgttcttca
      601 ccaccaaggc tgtggggaag ggcaccgggc ttgggctggc caccgcgttc ggtatcgtgc
      661 agcagcatcg aggcacgatg cgggtgacca gctcgccggg gaagggcacg accttcgaag
      721 tcctgctccc actcaccgcg ccggagaccg atcaggagga agccgtcgct gcgcccgcgt
      781 cgcggcgaaa ggttgccggg cagatcatgg tggtggagga cgatacggtg gtgcggaacc
      841 tgttgcggca ggcgctggaa cgggaaggct accgggtgct gtccgcggcg catggccccg
      901 aggcgctccg cctctggcag gaccggaggg cccggctgga cctgctgctg accgatatcg
      961 tgatgcccga gggcatctca gggccggaac tcgcggcccg gctgcaggcg caggattcca
     1021 ctctcaaggt gatctacacc agcggataca ccgccgacct cgcgccccgc ggcctccggc
     1081 tcgaggaagg ggtgaacttc ctgcagaagc cggtggcgct ggatcacctg ctcgagacgg
     1141 ttggccgagt gctcgacggg cccgcgagga accagcgcgg gcctactgat tcggcgggtg
     1201 taccacgaca accggagtag aggcctcggc cagccggagc accgcgtcga tcacggcctg
     1261 aggttgctcc tcgcccacgt actgccccga cccggcgacg ctgtccactg caaaatccac
     1321 cagcgactga tgcagctggg tcagtccatc ttccttgatg ccggcggggt ggtccaccga
     1381 gcccaccagc aggcggatgg ggattctcgc ctcgtgcagc cggtcgcgga gcgactcggg
     1441 ttcctgggcc ttcgacatgg cccgcagcgc gtcgatggtg ccgtgcacat ccgaggcctg
     1501 accgacagtg tattcgtcga gcacagccga ggtcacccag gtggtgtcgc ccgaattctc
     1561 gatcaggtcg tgtcgcaccc gcgagcggat ggtgccgggc cccacgaaca gcttggtgag
     1621 aaagccgccg aagcggaggg cgtgcttgag gcccggcgtg gccggggttt cggccgggcc
     1681 gccttctata gaaaggattc cccggagcaa ttccgggcgg cggtacgcca gccggtaggc
     1741 catggcggcc ccgctcgact gcgccacgat gagggcgctg gtgaccccga gactgtcgag
     1801 cacctggcca atgcgatcgg cctgggcggc gaaggagtag tcggccttgg acggatggga
     1861 cgacgagccg aaggcgagcg gctccaccac cacgcagcga tagcccatct cggccaatcg
     1921 gctggtgacg tgacggaatc cgaaggcgcc gccgaagatg ccgggaatga agaccaccgg
     1981 ctcacccgag ccgatggagg tggtgcggag aatctcgtcg ggggcgacct gcacgtcccg
     2041 cacgacggcg gtgtcaggcg cagacagcag cgccaggaga gcgagaagca cggggagttc
     2101 cttgcgcccg gagcgggcgt ggggcgggag gtcgagccgc gggtgatcgc aatctacccc
     2161 gttgccgccc cggcactagg tccctcgtgt catcctgatc ttttggacta ggcctcgagc
     2221 acccgcctgg ccgccgccac cgcacgcgcg acatcatgct cggtagtacg cca
//
LOCUS       DATIFF010000837         1312 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_105635, whole genome shotgun sequence.
ACCESSION   DATIFF010000837 DATIFF010000000
VERSION     DATIFF010000837.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1312
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105635"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..378)
                     /locus_tag="VLD58_12295"
     CDS             complement(<1..378)
                     /locus_tag="VLD58_12295"
                     /EC_number="1.-.-.-"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: protein motif:HMM:NF013412.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HSB55135.1"
                     /translation="MSDKLGFHEGERLVQRQAGVEDEARRLERIYRATIPPAAAEFLA
                     EQRLAVAGSVDAAGQVWASLLAGPPGSFRAVDERTVRISARPLAADPLRETVMRGGWV
                     GLLVLDPATRRRIRLNGVARLDAD"
     gene            complement(402..866)
                     /locus_tag="VLD58_12300"
     CDS             complement(402..866)
                     /locus_tag="VLD58_12300"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSB55136.1"
                     /translation="MDAATHTLPVGHVGLSVRDLDRSRDFYVRALGLKVVGQQEAQGT
                     RFAFLGDGERVTLTLWEQAAERFGDPRGAGAGLQHLAFEVPTASELEDVRRRLEALGA
                     GFAYEGVVPHAEGATSGGLYFTDPDGIRLEIYAPSGVHGHVPVTGAPTCGFF"
     gene            979..>1312
                     /locus_tag="VLD58_12305"
     CDS             979..>1312
                     /locus_tag="VLD58_12305"
                     /inference="COORDINATES: protein motif:HMM:NF018984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABATE domain-containing protein"
                     /protein_id="HSB55137.1"
                     /translation="MIPKVPRRVPEDPPMLFVGNLGWVDFVNTRYAGRTGPVEALTGP
                     AAVARWLKAAGMRTEPDGTGAVTRAPRLLAEAFRLRAALLETAVALSSGRPVPDPALE
                     AINRVLRAG"
BASE COUNT          210 a          470 c          435 g          197 t
ORIGIN      
        1 gtctgcgtcc agcctcgcca caccgttgag ccggatgcgg cggcgtgtgg ccggatcgag
       61 caccagcagc ccaacccacc cgccgcgcat cacggtctcc cgaagtggat ctgcggccag
      121 agggcgagcg ctgatccgga ccgtcctctc gtccaccgcc cggaacgagc ctggcggtcc
      181 cgccaggagg gaggcccaaa cctgccccgc ggcgtcaacc gatcccgcca ccgccagccg
      241 ctgctcggcc aggaactccg ccgccgctgg aggtatcgtg gcccgataga tccgctcaag
      301 ccggcgggcc tcatcctcga cgccagcctg gcgctggacc aggcgctcgc cctcgtggaa
      361 ccccagtttg tcgctcacgt tgcctccccc ggccaccccc gtcagaagaa gccgcaggtg
      421 ggagctccgg ttaccggcac gtgtccgtga acgcccgacg gcgcgtagat ctcgagccga
      481 atgccgtcag ggtcggtgaa gtacaggccg ccggatgtgg ccccttcggc atgagggacg
      541 acgccctcgt aggcaaaacc ggcgccgagc gcctccagtc gccgcctgac gtcctcgagc
      601 tccgacgccg tgggcacctc gaacgccaga tgctgcaggc ccgcgcctgc tccgcgagga
      661 tcgccgaagc gctccgcagc ctgttcccag agagtcaggg tgaccctctc gccgtcaccc
      721 aggaaagcga aacgggtgcc ctgcgcctcc tgctggccga ccaccttcag accgagagcg
      781 cggacgtaga aatcgcgcga ccggtcgagg tctcggaccg acagcccaac gtggccgacc
      841 ggcagcgtgt gcgtggcagc atccatggct cctccggggt tcttgtttcg tttatatcta
      901 actaaacagc tatacgctag gcataataat ggagtgacat accttgtcaa ctgccatgtt
      961 gaagggtaga atcccggcat gatccccaag gttcccaggc gggtcccgga ggatcccccg
     1021 atgctcttcg tgggcaatct cgggtgggtc gacttcgtga atacgaggta cgccgggcgc
     1081 accgggccgg tggaggccct gacgggccca gcggcggtgg cgcgatggct gaaggccgcc
     1141 ggtatgcgga cggagcccga cgggacgggc gccgtgactc gagccccccg cctgctcgcc
     1201 gaagcgttcc ggctccgggc cgcgttgctc gagacggccg tggcgctgtc ctcgggccgg
     1261 ccggttccgg acccggcgct cgaggcgatc aaccgggtac ttcgggcggg cg
//
LOCUS       DATIFF010000838         1091 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_105701, whole genome shotgun sequence.
ACCESSION   DATIFF010000838 DATIFF010000000
VERSION     DATIFF010000838.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105701"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..643)
                     /locus_tag="VLD58_12310"
     CDS             complement(<1..643)
                     /locus_tag="VLD58_12310"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSB55138.1"
                     /translation="MTTSGHAPETVLVTGGGGFLGRAVVRALTARGDRVRTYSRRPHP
                     ELAPMPVEQVLGDIADRQALESACRGVDAVYHTAAKPPPWGVYRDYHRTNVTGTLNVI
                     AACRRNKVPRLIHTSTPSVIFDGRDLEGVDESVPYPPRYTAHYPMTKAAAEKAVVTAG
                     KEDLATIVLRPHEIWGPEDPHFVPRILARAGRLRRIGNGRNRVDTTYIDNAAEA"
     gene            complement(640..>1091)
                     /locus_tag="VLD58_12315"
     CDS             complement(640..>1091)
                     /locus_tag="VLD58_12315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55139.1"
                     /translation="HRMGDLGWMDRKGRIWFCGRKSHRVTTAGGPLYTIPCESIFNTH
                     PLVYRSALVGIGSPNHQAPVICIELKKTKKRINRKTVRTELLHLASQHEITREIKIIL
                     FRDSFPVDIRHNAKIFREQLSDWAARKVKPAVKPAATRRGRETGDRR"
BASE COUNT          142 a          332 c          409 g          208 t
ORIGIN      
        1 gggcttcggc ggcgttgtcg atgtaggtcg tgtcgacccg gttgcggccg tttccgatgc
       61 gccgcagcct gccggcgcgg gccaggatgc gcgggacgaa gtgcgggtcc tcggggcccc
      121 agatctcatg cggcctgaga acgatggtgg cgagatcctc cttcccggct gtgaccacgg
      181 ccttttcggc cgcggccttg gtcatggggt agtgtgcggt gtagcgcggc gggtagggca
      241 cggactcatc cacgccttcg aggtcgcggc cgtcgaatat cacgctgggg gtgctggtgt
      301 ggatgagccg ggggaccttg ttccggcggc aggcggcgat cacgttcagc gtgcccgtga
      361 cattggtgcg gtggtagtcg cggtagacgc cccagggcgg cggtttggcc gccgtgtggt
      421 agacggcgtc gacccctcgg caggcgctct ccagggcctg ccggtcggcg atgtcgccca
      481 ggacctgctc gaccggcatg ggcgccagct ccgggtgggg tctgcgggag taggtgcgca
      541 cgcgatcgcc gcgggcggtc agcgcacgca cgacggcgcg gccgagaaaa ccgccgccgc
      601 ccgtaaccag gacggtttcg ggcgcgtgcc cggaggtcgt catcggcgat cccccgtttc
      661 gcggccgcgt cgcgtggccg ccggcttgac tgccggtttg accttccggg ccgcccagtc
      721 cgacagctgt tcacggaaga tcttggcgtt gtggcggatg tcgaccggga atgaatcgcg
      781 gaagagaatg attttgatct cccgcgtgat ctcgtgctgc gaggccaggt ggagcagctc
      841 cgtccggacg gttttgcggt tgatccgctt ctttgttttt ttcagctcga tgcagatcac
      901 cggggcctgg tggttcgggg agccgatgcc aaccagcgcg ctgcgataga ccagggggtg
      961 ggtgttgaaa atggattcgc aggggatcgt gtagagcggc ccaccggcgg tggtcacgcg
     1021 gtggcttttt cgcccgcaga accagatgcg ccccttccgg tccatccacc ccagatcgcc
     1081 catgcggtgc c
//
LOCUS       DATIFF010000839         1042 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1029617, whole genome shotgun sequence.
ACCESSION   DATIFF010000839 DATIFF010000000
VERSION     DATIFF010000839.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1042
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1029617"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1028)
                     /locus_tag="VLD58_12320"
     CDS             complement(<1..1028)
                     /locus_tag="VLD58_12320"
                     /inference="COORDINATES: protein motif:HMM:NF012431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSB55140.1"
                     /translation="MEDISELAEKVREAFHIATEGRPGPVLIDVPKDVQNQKAEWVGG
                     AAGRRGSGRPDRSHSRPPARAAAPTAEGVAAAAQLIDEAERPLLLVGHGVILAGAYVE
                     VRTLAEKTGIPVITTLLGISAFPESHPLHLGLAGMHGEVHVNRAIQQADLLIGIGLRF
                     DDRVTGNTAGFAPRARIIHVDLDPAEIGKNVAVELGITGDARDVAIRLLDAVAPRDCE
                     EWRAEIRSFQRGRREQYRGDMAPETILTAIREVTGGRAMIVSDVGQHQMWVAKHYPYT
                     RPNSHITSGGLGTMGFAVPAAMGVHFARPDHPVWAISGDGGFQMNMQEIATMVQEGIP
                     VKMAIFNNG"
BASE COUNT          153 a          384 c          328 g          177 t
ORIGIN      
        1 ccgttgttga agatcgccat cttcaccggg atcccttcct gcaccatcgt ggcgatctcc
       61 tgcatgttca tctggaagcc gccgtctccc gagatggccc agaccggatg atccggtcgg
      121 gcgaagtgca cgcccattgc cgcgggaacc gcgaagccca tcgtgcccag cccgcccgac
      181 gtgatgtgac tgttcggccg ggtgtaggga tagtgcttgg ccacccacat ctggtgctgc
      241 cccacatccg agacgatcat cgcccgccct cccgttacct cgcggatggc tgtcaggatc
      301 gtctcggggg ccatgtcccc ccggtactgc tcgcgccgcc ctcgctggaa gctgcggatc
      361 tccgcccgcc attcctcgca gtcccggggc gccaccgcat cgagcagcct gatggcgacg
      421 tcgcgggcgt ctccggtgat cccgagctcg accgccacgt tcttgccgat ctcggccgga
      481 tcgagatcca cgtggatgat cctggcgcgc ggggcgaacc cggcggtatt acccgtcacg
      541 cggtcatcga agcgcaggcc aatcccgatc agcaggtccg cctgctgaat ggcgcgattc
      601 acgtgcacct cgccatgcat gccggccaac ccgagatgca gcgggtgaga ctcgggaaag
      661 gcgctgatcc cgagcagcgt ggtgatcacc gggatcccgg tcttctccgc cagggtccga
      721 acctccacgt aggcgccagc gaggatcaca ccgtgcccga ccagcagcag cggccgctcg
      781 gcctcgtcga tcagttgggc ggcggcggcc acaccctcgg ccgtcggggc tgctgcccga
      841 gcggggggcc gggaatgcga gcggtccggc cggccgctgc cccgccggcc ggcggcccct
      901 ccgacccact cggccttctg attctgcaca tccttgggta cgtcgatcag aaccgggccg
      961 ggacgcccct cggtggcgat gtgaaacgcc tcacgcacct tctcggccag ctcgctgatg
     1021 tcttccacca gcacgctgtg ct
//
LOCUS       DATIFF010000840         1540 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_720675, whole genome shotgun sequence.
ACCESSION   DATIFF010000840 DATIFF010000000
VERSION     DATIFF010000840.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_720675"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            179..748
                     /locus_tag="VLD58_12325"
     CDS             179..748
                     /locus_tag="VLD58_12325"
                     /inference="COORDINATES: protein motif:HMM:NF024135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin domain-containing protein"
                     /protein_id="HSB55141.1"
                     /translation="MTKVLIVYGSAYGQTTRIARRFADRLEENGIHTVVVNGATLPPE
                     IQMEQFDGFVVAGSVRYGRHQRYLEKFVRQYHGGFGHRPSAFISVCGAMSSKQPEGAV
                     EARKYRLAFFKRTGWSPQFDQSFAGGLPYTQYGVLTRMMMKAISRRTGGPVDTSRDWD
                     FTDWKQVDQFALDFAHALVGSVPAALVHA"
     gene            complement(802..>1540)
                     /locus_tag="VLD58_12330"
     CDS             complement(802..>1540)
                     /locus_tag="VLD58_12330"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSB55142.1"
                     /translation="SLAERLFPDRDPIGQQVAWTGDVLRFIPVSGKWRTVVGVVGDTK
                     DGGLDAEARNVMFLPFAQEQIFAGGLVIRAQTSPDALAAAATRLVRGIVPTDPIENVM
                     TIAQIRDQSVAPRRLNAMLVSSFGILALIIAAVGIAGVLAFSVNARTSEIGIRMSLGA
                     DSGMVERMILAEGGVLLVLGLAGGLAGALLGSQMIRGLLFGVAPHDPVTLTGVGVTMA
                     TIGLLACWLPARKAASIDPAIAMRHQT"
BASE COUNT          254 a          541 c          511 g          234 t
ORIGIN      
        1 attggggtag tcggcgccgc catgctcccg gcctgggtgg ccatcggagc gatcgccgca
       61 ctcctggcca acctcacgat cgaagttgag cggaccgaag tgaccgagcc ggccctggtt
      121 tcgactcccc aggcgtagtc gggctcggcg cccgggaaag acccggaggg aggaacccat
      181 gacgaaagtc ctgattgttt acggcagcgc ctacggtcag accaccagga tcgctcggcg
      241 cttcgcggac cggctggagg agaatgggat ccacacggtg gtcgtcaacg gggcaaccct
      301 gccgccggag atccagatgg agcagttcga cggcttcgtg gtggcgggat cggtacgcta
      361 cgggaggcac cagcgctacc tcgagaagtt cgtccggcag taccacggcg ggttcggcca
      421 tcggccatcc gccttcatct ccgtctgcgg cgcgatgagc agcaagcagc ccgagggcgc
      481 tgtggaagcc cggaagtacc ggctcgcctt cttcaaacgg accggctgga gtccacagtt
      541 cgaccagtcg ttcgccgggg gactgcccta cacgcagtac ggggtgctca cccgcatgat
      601 gatgaaggcg atcagccggc gcactggcgg gccggtcgac accagccggg actgggattt
      661 caccgactgg aagcaggttg atcagttcgc gctcgacttt gcccacgccc tcgtgggtag
      721 cgttcccgcg gcgctggttc acgcctgagt agttgccgat gggtgggcag cgcgggccat
      781 cctcccgcgc cgcccgccgg ttcaggtctg atgcctcatg gcgatggcgg gatcgatgct
      841 cgccgccttc cgcgccggaa gccagcaggc gaggagcccg atcgtcgcca tggtcacccc
      901 gacgcccgtc agggtgacgg gatcgtgcgg cgccaccccg aagagcagcc cccggatcat
      961 ctgagagccg agaagcgccc ccgccagccc gcccgcgaga cccagcacca gcagcacccc
     1021 gccctcggcc aggatcatcc gctccaccat tccgctgtcg gcacccaggc tcatccggat
     1081 gccgatttcg ctggtccggg cattcaccga gaaggccagc accccggcga tccccaccgc
     1141 tgcgatgatc agcgccagga ttccgaagga tgataccagc atcgcgttga gccggcgggg
     1201 cgcgacgctc tggtcccgga tctgggcgat ggtcatcacg ttctcgatcg ggtcggtggg
     1261 cacgatgccc cgcaccagcc gggtggccgc ggcggccagc gcgtcgggcg aggtctgcgc
     1321 ccggatcacc aggccgcccg cgaagatctg ctcctgcgca aacggcagga acatcacgtt
     1381 ccgcgcctcg gcatcgagcc cgccgtcctt ggtgtctcct accaccccga ccacggtgcg
     1441 ccacttcccg ctcaccggaa tgaaacggag cacgtcgccg gtccacgcca cctgctggcc
     1501 gatcgggtcg cggtcgggga agagccgctc tgccaggctc
//
LOCUS       DATIFF010000841         1504 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1951780, whole genome shotgun sequence.
ACCESSION   DATIFF010000841 DATIFF010000000
VERSION     DATIFF010000841.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1951780"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..229)
                     /locus_tag="VLD58_12335"
     CDS             complement(<1..229)
                     /locus_tag="VLD58_12335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55143.1"
                     /translation="MGLSDFEPVVLASGEWSIRDRRSGEIMHPGLGPRRESELLYVEQ
                     TRLVERLTASGSAPVRVLDVGLGAATNALAVI"
     gene            complement(220..1320)
                     /gene="tgt"
                     /locus_tag="VLD58_12340"
     CDS             complement(220..1320)
                     /gene="tgt"
                     /locus_tag="VLD58_12340"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: protein motif:HMM:TIGR00430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HSB55144.1"
                     /translation="MRFTLERTDGLARAGVLHTRRGDVPTPVFMPVATHAAFRHVSVD
                     EAGEAGARILLGNTYHLMLRPGREVFERLGGIHRFMGWDGCVLTDSGGYQIFSLPEDR
                     EITERGAHFRSFHDNSRQLLSPESSIAMQQALGSDIMMVLDVVHDARADLEPAREAME
                     RTHRWAVRSLEAAQVRDTGQALFGIVQGGIHPELRDASVAFLTGLPFHGFAIGGLAVG
                     EEKPHRDAMTARVAGRLPGDRPRYLMGVGTPLDLVEAVERGVDMFDCIIPTKMAQQGY
                     AYTFQGLLRITRMVHRLEEVPLDPHCDCFTCRRHGRAYVHHLMRGKHALGSRLLSIHN
                     LRHYQVLMGRMREAILAGRYAALVREMRALWG"
BASE COUNT          220 a          551 c          512 g          221 t
ORIGIN      
        1 cgatgaccgc cagggcgttg gtcgccgcgc cgagccccac gtcgagcacg cggaccggcg
       61 ccgaaccgga cgcggtcagc cgttcgacca ggcgcgtctg ctccacgtac agcagctccg
      121 actcgcgtct cggcccgagg ccggggtgca tgatctcccc cgagcggcga tcccggatgc
      181 tccattcgcc actggcgagc accaccggct cgaagtcgct cagccccaca gcgctcgcat
      241 ctcccggacc agagccgcgt agcgcccggc gaggatcgcc tcccgcatcc ggcccatcag
      301 cacctggtag tgccggaggt tgtggatcga aagcagccgg ctcccgagcg cgtgcttgcc
      361 tcgcatcagg tggtggacgt aggcccgccc gtgccggcgg caggtgaagc agtcgcagtg
      421 gggatcgagc ggaacctcct ccagccggtg gaccatccgg gtgattcgaa ggaggccctg
      481 aaaggtgtag gcgtagccct gctgcgccat cttggtgggg atgatgcagt cgaacatgtc
      541 aacgccccgc tccaccgcct cgaccaggtc gagtggtgtt cccacgccca tcaggtagcg
      601 gggcctgtcc cctggtagcc gtccggccac ccgagcggtc atcgcgtccc ggtgtggctt
      661 ctcctccccc accgcgagcc caccgatggc gaagccgtga aacggaagcc cggtgaggaa
      721 ggcgacgctc gcgtcccgga gctcggggtg gatcccgccc tgcacgatgc cgaagagcgc
      781 ctgaccggtg tcccggacct gcgccgcctc gaggctccgg accgcccagc ggtgcgtgcg
      841 ctccatcgcc tcgcgcgccg gctcgaggtc ggcccgcgca tcgtggacca cgtcgagcac
      901 catcatgatg tccgagccga gcgcctgctg catcgcgatg ctgctttcgg gcgagagcag
      961 ctggcggctg ttgtcgtgga agctccggaa gtgggcgccg cgctcggtga tctcccggtc
     1021 ctcgggaagg ctgaagatct ggtagccgcc cgagtcggtc agcacgcagc catcccaccc
     1081 catgaagcgg tggatgccgc ccagccgctc gaagacctcc cggccgggcc gcagcatcag
     1141 gtggtaggtg ttgcccagga ggatgcgcgc gccggcctca ccggcctcgt cgacgctcac
     1201 gtggcggaac gcggcgtggg tggccaccgg catgaagacc ggcgtcggga cgtccccccg
     1261 ccgggtgtgc agcacgccgg cccgggcgag gccatccgtc cgctcgaggg tgaatcgcaa
     1321 ggtgctcaat gccggaagac accctgcccc agcggcggcg gtgacgccag cgcacgcgct
     1381 gctagggtgc ctccgttccg atgcctgccc tcgccgatct cctcccgccc gagccgacct
     1441 ccgacccgga catgctgctg gagcgcttcc tggcctgggt gcagagcacc ggtctgaccc
     1501 tcta
//
LOCUS       DATIFF010000842         3653 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_105840, whole genome shotgun sequence.
ACCESSION   DATIFF010000842 DATIFF010000000
VERSION     DATIFF010000842.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3653
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105840"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..284)
                     /locus_tag="VLD58_12345"
     CDS             complement(<1..284)
                     /locus_tag="VLD58_12345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55145.1"
                     /translation="MGLKQTVVLAIDELALSKLGEDFRLAGRRGVAGLQQEFAVKMAD
                     LRADLAKGLINEKDWRAQAQRVGTAFNNEIVAKMDGLKERIERLGPALKDA"
     gene            complement(375..1001)
                     /locus_tag="VLD58_12350"
     CDS             complement(375..1001)
                     /locus_tag="VLD58_12350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55146.1"
                     /translation="MGTLHLTPQAQLDATQRILRADVAARRGDIGNVDAAILGHDIGW
                     VEYRGRSYDVPPVPYREGLVLMALGDELRRLAPDPDVMPSGDVLEQVLVLLSNLLDTM
                     GRCVRPPWWRRLAARLRLPLAPWRPFDDAEGNEVAALLAFFANRRTRSGVRGSMSRTA
                     LPRYQRTWPITSPPSPGPIPVGWWAARRAVFAITKSATRRSTTTRSAA"
     gene            complement(1110..2012)
                     /locus_tag="VLD58_12355"
     CDS             complement(1110..2012)
                     /locus_tag="VLD58_12355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55147.1"
                     /translation="MGTINRFAFTEAIRQMGDAEVWINELFSVAGGWRSLGAKEGAIT
                     EAQSWTQNALTAPEHTGGIPHKLQYVLASMAVTIPIIAGHPDLWDIISPTGAPYGVGS
                     SPSDAKELSMFLVPRIEVPEGVGLSYTTPAGMSDPADNWTARQYPPNSSGNATVASIT
                     GKTAGVRQRITITFTSATAFTVVGSASGSLGTGTLGTPFTSTAIDFTATAGAQPQAAG
                     DVKYIMVEAFAGEGWSPAAPVNALFFPRCSISHGDVGRPYEQLGKSVVPVTIQPMFYA
                     SGPAGKQVYVRGDPVYHGYTTFKI"
     gene            complement(2028..2528)
                     /locus_tag="VLD58_12360"
     CDS             complement(2028..2528)
                     /locus_tag="VLD58_12360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55148.1"
                     /translation="MSNVRLVPLWTAILARLNTADARAVMRGDRTFLAHEDYGTKTGP
                     EGEPWGRQVVMPPSGLAGVLWDEVAAGTHRAVSFNLLTEMNDYTAPGYNVAVALEQLQ
                     DLGYTQLQEWNPGPLPLADPIVLPTLALHRVRSPQPVPEWDEATNMWWMSSAWRCEAA
                     RVMALT"
     gene            complement(2525..2983)
                     /locus_tag="VLD58_12365"
     CDS             complement(2525..2983)
                     /locus_tag="VLD58_12365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55149.1"
                     /translation="MVNIFPKGELEGVLEALREIERDTTTKLHQVATYTGIRAVETVK
                     SLTAEMRPPARKPNGEWTGPRRAHPGHWADITGILVNSYYAVATIIRPGQVDLEMGNT
                     ASYAQKLEDKDNYWVLEGVAAKGGPVEQALAQAVAALAPDWKLTSEGSYG"
     gene            complement(2983..3360)
                     /locus_tag="VLD58_12370"
     CDS             complement(2983..3360)
                     /locus_tag="VLD58_12370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55150.1"
                     /translation="MATLGTPGDLGYPDRLRIVKPGTGGVQNPTTGEWTAAPVQVVYD
                     GAAAFYDTGAALRRTRDGRVVEAWECEAYLPPAAEKAGVLATIRPDQPCTLEWADGSR
                     SSAEVIRARRIDAVVELTRLVAL"
     gene            complement(3360..>3653)
                     /locus_tag="VLD58_12375"
     CDS             complement(3360..>3653)
                     /locus_tag="VLD58_12375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55151.1"
                     /translation="AEDALGLTGTTYTGALAERAKLAVARQVNRIVAEPGDPFLLSHT
                     RGAESKTWDSRAAATAKTVPLDPYAILIVEALAREAAGEDEGSYLLVPTLRWR"
BASE COUNT          510 a         1285 c         1243 g          615 t
ORIGIN      
        1 gcatccttga gggccgggcc gagccgttcg atccgctctt tcaacccgtc catcttggcg
       61 acgatttcgt tgttgaatgc cgtgccgacc cgctgagcct gggcgcgcca gtccttttcg
      121 ttgatgaggc ccttcgccaa gtcggctcgg aggtcggcca tcttgaccgc gaactcctgc
      181 tggagcccgg ccacgccccg gcgaccggcc agccggaagt cctcccccag cttcgagagg
      241 gcgagttcgt caatggcgag gacgacggtc tgcttcaggc ccatcggtcg tctcctacaa
      301 gccgagcgcg cggtagatgc ggtcgttcca tgcggcctcc gcgccgggtg cttccgcctg
      361 cggcaccggg cggatcatgc ggcggagcgt gtcgtggtcg agcgccgcgt tgccgatttg
      421 gtaatggcga aaacagcacg gcgcgccgcc caccatccaa cagggatagg tccgggcgaa
      481 ggcggcgagg tgatcggcca cgtccgttgg tagcggggga gtgccgtcct cgacatcgaa
      541 ccgcgcacgc cggatcgtgt ccggcggttg gcaaaaaaag cgagcagcgc ggccacctcg
      601 ttgccttcgg cgtcatcgaa gggtcgccag ggcgcgagcg ggagccggag ccgggcggcg
      661 agccgccgcc accacggcgg gcgcacgcac cggcccatcg tgtcgagcag attgctgagc
      721 aagacgagga cctgctccaa cacgtcgccg ctcggcatca catcggggtc gggggcaagc
      781 cgccggagtt cgtccccgag cgccatcagc accaacccct cccggtaggg gacgggcggc
      841 acgtcgtagc tccggcctcg gtactccacc cacccgatgt cgtgcccgag gatcgcggca
      901 tccacgttcc cgatgtcccc acgccgagcg gcgacatcgg cccggagaat ccgctgcgtc
      961 gcgtcgagtt gcgcctgcgg agttaggtgc agcgtgccca tcggtggtcc tcagtggcaa
     1021 ggcgcggccc cgcgcccctc cgtggggcac agatgccgcg ccgagttatg ggagccagtg
     1081 ccgttgaccg gctcccaagt ggaagcgtcc taaatcttga aggtggtgta gccgtggtac
     1141 accgggtcgc cacggacgta gacctgcttg cccgccgggc cgctggcgta gaacatcggc
     1201 tgaatcgtga ccgggaccac gctcttgccg agttgctcgt aggggcgtcc cacgtcgccg
     1261 tggctgatag agcagcgggg gaagaacagc gcgttgaccg gcgcggcggg ggaccagccc
     1321 tcgcccgcga acgcctcgac catgatgtac ttcacgtccc cggcggcctg cggctgcgcc
     1381 ccggcggtcg cggtgaagtc aatcgcggtg ctggtgaacg gggtgccgag cgtgccggtg
     1441 cccaggctgc cgctcgcgct cccgacgacg gtgaacgcgg tggcgctggt gaaagtgatc
     1501 gtgatgcgct ggcggacacc cgccgtcttc ccggtgatgc tggcgacggt cgcgttgccg
     1561 ctgctgttgg gcgggtactg ccgcgccgtc cagttgtccg ccgggtcact cattccggca
     1621 ggcgtggtgt agctcagccc gaccccctcg gggacttcga tgcgcggcac caggaacatg
     1681 gagagttcct tggcgtcgga ggggctggag ccgacgccgt agggtgcccc ggtcggggag
     1741 atgatgtccc acaggtccgg gtgcccggcg atgatcggga tggtgaccgc catgctggcg
     1801 agcacatact ggagtttgtg ggggatgccc ccggtgtgct ccggcgcggt gagcgcgttc
     1861 tgggtccacg actgggcctc ggtgatcgcg ccctctttcg cgcccagcga gcgccatccg
     1921 cccgccacgc tgaacaactc gttgatccag acttcggcgt cgcccatctg gcggatggct
     1981 tcagtgaagg cgaagcggtt gatagttccc attggtcagc ccccggatta ggtaagcgcc
     2041 atcacccgcg cagcttcaca gcgccacgca ctcgacatcc accacatatt cgtcgcctca
     2101 tcccactctg gcaccggctg gggtgaccgc acccggtgga gcgcgagcgt cggcaacact
     2161 atcggatcgg cgaggggcag cgggccgggg ttccactcct gcaactgcgt gtaccccagg
     2221 tcttgcaact gctccagcgc gaccgccacg ttgtagcccg gcgcggtata gtcgttcatc
     2281 tcggtcagga ggttgaacga gaccgcccgg tgcgttccgg cggcgacctc atcccagagc
     2341 acccccgcca acccgctcgg cggcatgacg acctgccgcc cccacggctc cccttccggc
     2401 cccgtcttcg tgccgtagtc ctcatgggcg aggaaggtcc ggtcgccgcg catcaccgct
     2461 cgcgcatcgg cggtgttgag ccgggcgagg atcgcggtcc agagcggcac caggcggacg
     2521 ttgctcaccc gtagctcccc tcactggtca gcttccagtc gggggcgagc gccgcgacgg
     2581 cttgcgcgag cgcctgctcg accggcccac ccttcgccgc gaccccttcg aggacccagt
     2641 agttgtcctt gtcctctagc ttctgggcat agctcgcggt gttgcccatt tcgaggtcca
     2701 cttggccggg ccggatgatg gtggcgacgg cgtagtagct gttgaccagg atgccggtga
     2761 tgtcggccca gtggcccgga tgcgcccgcc gggggccggt ccactcgccg ttcggcttcc
     2821 gggccggagg ccgcatctcg gcggtcaggg acttcaccgt ctcgaccgcc cggatgccgg
     2881 tgtaggtcgc cacctggtgc agcttcgtgg tggtgtcccg ctcaatctcc cgcagggcct
     2941 ctaggacccc ttcgagttca cccttcggga agatgttgac catcagagcg ccaccagtcg
     3001 ggtgagttcc accaccgcgt ctatccgccg cgcccggatt acttccgcgc tgctccggct
     3061 cccgtccgcc cactccagcg tgcagggttg gtcgggccgg atcgtcgcca acacgcccgc
     3121 cttttccgcc gccgggggca ggtaggcttc acactcccag gcttccacta cgcgcccatc
     3181 ccgcgtccgg cggagcgcgg ccccggtgtc atagaacgcc gccgccccgt cgtagacgac
     3241 ctggaccggc gcggcggtcc actcgcccgt ggtcgggttc tgcacgccgc ccgtgcccgg
     3301 cttgacgatg cggagccggt cgggatagcc caggtcccca ggagtgccga gcgtcgccat
     3361 cagcgccacc gtagggtggg aaccaggagg tacgacccct catcctcacc cgctgcttcg
     3421 cgcgcgagcg cctccacgat caggatggcg taggggtcga gcggcaccgt cttcgcggtc
     3481 gcggcggccc ggctatccca ggtcttcgat tccgcgcctc gcgtgtgact caggaggaac
     3541 gggtcgcccg gctcggccac gatccggttg acctgccggg ccaccgccag cttggcccgc
     3601 tccgccaggg ctccggtgta cgtcgtcccg gtgagcccga gcgcgtcctc cgc
//
LOCUS       DATIFF010000843         1318 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1951966, whole genome shotgun sequence.
ACCESSION   DATIFF010000843 DATIFF010000000
VERSION     DATIFF010000843.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1318
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1951966"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..920)
                     /locus_tag="VLD58_12380"
     CDS             complement(<1..920)
                     /locus_tag="VLD58_12380"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB55152.1"
                     /translation="MTRSPAALLLRGLHKSYADVHAVAGLDLEVAPGECFGLLGPNGA
                     GKTTTIEICEGLTRPDIGQVEVLGLRWDQAESTLRRRIGVSLQETQFSEKLTVEETIR
                     LFRSFYEAGPAVETLLEQVQLVEKRRGRVGQLSGGQRQRLALALALVGDPELLFLDEP
                     TTGLDPQSRRQLWDLIAGLKAMGRTVILTTHYMEEAERLCDRVAVVDHGRVIAEGTPR
                     ELIASLGADQVVELTVSDPAGTASECRNLAGVLDVRIEAATLTLRVTRMHETLPQLLA
                     RLREQGTELHELRTHAPTLEDVFVSLTGRHL"
     gene            complement(952..1230)
                     /locus_tag="VLD58_12385"
     CDS             complement(952..1230)
                     /locus_tag="VLD58_12385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55153.1"
                     /translation="MLLMDRENLLKPGWSHVLSTTNDLAELDALRRRVEAPPRALHRR
                     PHRPHLDLKLEARERALADPGVRVFETTRDLIRFWHEARRAHGIVRRA"
BASE COUNT          200 a          456 c          462 g          200 t
ORIGIN      
        1 aggtgcctcc cggtgagcga gacgaagacg tcttcgagtg tcggcgcgtg ggtcctgagc
       61 tcgtgcaact cggtgccctg ctcccggagt cgggccagga gctgcggcag ggtctcgtgc
      121 atccgcgtca cccgaagggt gagggtggcg gcttcgattc gcacgtccag cacgcccgcg
      181 agattccggc actccgaggc cgtccccgcc ggatcgctga ccgtcagctc caccacctgg
      241 tcggctccca gcgatgcaat cagctcccgc ggcgtcccct cggcgatcac ccggccgtgg
      301 tcgacgaccg ccacccggtc gcacaggcgc tcggcctcct ccatgtaatg ggtagtgagg
      361 atgaccgtgc ggcccatcgc cttgagcccg gcgatcaggt cccacagctg gcggcgggat
      421 tggggatcga gcccggttgt cggctcgtcc aggaagagga gctccggatc gcccaccagg
      481 gccagcgcca gcgccaggcg ctgccgctgc ccgccggaaa gctgcccgac ccgcccccgg
      541 cgcttctcaa cgagctgtac ctgctccagg agagtctcca ccgccgggcc ggcctcatag
      601 aagctccgga acagtcggat cgtctcttcg accgtgagct tctcggagaa ctgggtttcc
      661 tgcagcgaga caccgatccg gcgccggagg gtggattccg cctgatccca gcgcagaccc
      721 agcacctcca cctggccaat gtccggccgg gtgaggcctt cgcagatctc gatcgtcgtg
      781 gtctttcccg cgccgttcgg gccgagcagg ccaaagcatt cgccgggagc cacttccagg
      841 tcgagcccgg caacggcgtg gacgtccgca tatgacttgt ggaggccccg gagcaggagg
      901 gctgctggag agcgagtcat cggtctcccg gtcgaatcgg ggaaggggtg ctcaggcccg
      961 ccgcacgatg ccgtgggccc gccgggcctc atgccagaac cgaatcagat cgcgggtcgt
     1021 ctcgaacacg cgcacgcccg gatcggccag cgcccgctcg cgcgcctcga gcttgaggtc
     1081 caggtgcggc cggtgcggcc gccgatgcag cgcccggggc ggggcttcca cccggcggcg
     1141 gagcgcgtcg agctcggcca ggtcgttcgt ggtggagagc acgtgcgacc agccgggctt
     1201 cagcaggttc tcgcgatcca tcaggagcat gcgggaggta gggtcaggga tcggggaccg
     1261 gggatcaggg atcgggcgcg ctcacgtgca agcaagttaa tggcgcctcg acagcccg
//
LOCUS       DATIFF010000844         1373 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1952022, whole genome shotgun sequence.
ACCESSION   DATIFF010000844 DATIFF010000000
VERSION     DATIFF010000844.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1373)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1373
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1952022"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..383
                     /locus_tag="VLD58_12390"
     CDS             <1..383
                     /locus_tag="VLD58_12390"
                     /inference="COORDINATES: protein motif:HMM:NF015415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55154.1"
                     /translation="MTEDELLTDILLPGMGRNAAAYVSFDQAASGYAIVGCCVSLGRK
                     RATISDISVAYTGLSDVAFLAPAFDQVVGTKGDMATVEKAAQEAVADLEIAGDVHAPA
                     DYRRHLAVVAAKRAVQQAYERAGR"
     gene            471..1073
                     /locus_tag="VLD58_12395"
     CDS             471..1073
                     /locus_tag="VLD58_12395"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HSB55155.1"
                     /translation="MYALLLAAGESHRFGENKLLAPLHGRPLIAHTAAAVAEAITGGI
                     LAGGVAVVPSGATELAWPLDTAGLTLVENPDPAAGLARSLRLGLAAVEAACPTAGAAL
                     VLLADQPGVRIDVIARLVAAWRAEGRSVRPRYLETPDQPGHPVLVDRSLWPLVRELEG
                     DTGLGPALAARPDAVTVVEVGGRNPDVDTPEDLRQLEESG"
     gene            1073..>1373
                     /locus_tag="VLD58_12400"
     CDS             1073..>1373
                     /locus_tag="VLD58_12400"
                     /inference="COORDINATES: protein motif:HMM:NF017999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HSB55156.1"
                     /translation="MRLSFSGMPEVPAPLADVWPRIINPHFVARHGPGVESVAVLDLR
                     HFKVITGFGVGSIRLRFGIDVELLEVNPPNYFTMKCRGKAPGSAVEVTAELALEIL"
BASE COUNT          207 a          465 c          489 g          212 t
ORIGIN      
        1 agatgaccga ggacgagcta ctcaccgaca tcctgcttcc cggcatgggc cgcaacgcgg
       61 cggcctacgt cagcttcgac caggccgcct ccggctacgc catcgtcggc tgctgcgtga
      121 gcctgggccg caagcgcgcc acgatctcgg acatcagcgt ggcctacacc ggcctgagcg
      181 acgtggcgtt cctggctccg gccttcgacc aggtcgtcgg caccaagggg gacatggcga
      241 cggtggaaaa agcggcccag gaggcggtgg ccgacctcga gatcgccggg gacgtccatg
      301 cccccgccga ctaccgcagg cacctcgcgg tggtggcggc gaagcgggcg gtgcagcagg
      361 cgtatgagag ggcgggacgg taggcggtga gttcccagtt cccagttccc ggttcccaaa
      421 ggagccctgc acctttcaca gcactgggaa ctgggaactc ggaactggcg gtgtacgccc
      481 tgctcctcgc agccggcgag agccaccgat tcggcgagaa caagctgctc gccccgttgc
      541 acgggcgtcc gctgatagcc cacaccgcgg cggcggttgc cgaggcgatc acgggcggga
      601 tcctggccgg cggcgtcgcg gtagtacctt cgggggcgac ggagctcgcc tggccgctcg
      661 acacggcagg cctcaccctg gtcgagaacc ccgatccggc cgcagggctc gcccgctcgc
      721 tccggttggg ccttgccgcc gtggaggcgg cctgccccac ggcgggcgcg gccctggtct
      781 tgctggcaga tcagcccgga gtccggatcg atgtcatcgc ccggctcgtg gctgcatggc
      841 gtgcggaggg tcggagcgtc aggccccgct accttgaaac gccggatcag ccgggacacc
      901 cggtcctggt ggaccggtcg ctgtggcctc tggtccgcga gctggaggga gacaccggac
      961 tcggtccggc gctcgcggcc cggccggatg cggtaaccgt cgtggaagtg ggcggccgaa
     1021 atccggacgt ggacactccg gaggacctcc gccaactcga ggaatctggc tgatgcggct
     1081 cagcttctct ggcatgccgg aagtgcccgc cccgctcgcg gatgtctggc cccggatcat
     1141 caacccgcac ttcgtggcca ggcatggccc cggcgtggag tcggtggcgg tgctggacct
     1201 gcgtcatttc aaggtgatca ccggattcgg cgtcggatcg atcaggcttc gcttcgggat
     1261 cgacgtagag ctgctcgaag tgaatccgcc caactacttc accatgaagt gccgcgggaa
     1321 ggcccccgga tcggccgtcg aggtgaccgc cgagctggcg ctcgagatcc tgg
//
LOCUS       DATIFF010000845         1761 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_873721, whole genome shotgun sequence.
ACCESSION   DATIFF010000845 DATIFF010000000
VERSION     DATIFF010000845.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1761)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1761)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1761
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_873721"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            164..1573
                     /locus_tag="VLD58_12405"
     CDS             164..1573
                     /locus_tag="VLD58_12405"
                     /inference="COORDINATES: protein motif:HMM:NF013707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSB55157.1"
                     /translation="MPRMGEDLHRFLRTELMPGVWCPGCGHGNVLRGIATALDRQHRD
                     LDRVVCVGGIGCAGRSPFYLNTSAMHTTHGRALAFATGLKTARPDLTVLVTMGDGDAA
                     AIGGNHFIHACRRNLDLTAIIYNNGTYGMTGGQQAPTTPSGMRSTTTPLGAIEQPFDI
                     SELARAAGASYVARTTTFDFEELPTYIAEAIAHPGFAVVEVLTQCPTYFGRLNHLGDP
                     ATMLDYERDLTFPVEPMTRDQVAGQLPVGRFRQEIRPEFTNRYAALCDRARAAAEKET
                     ALAEAEPTGEMRALPHDPYQVRFSGAGGQGVILAGVLLADAACAEGLQAVHTQSYGPE
                     ARGGACKSEVVLSSEEIAFPEVDRPDAVVCLSAEAMRKYPALAGSLRLVEERACMDQP
                     PAEHDIVLPVVRAAVEAGGELAVNVVALGALAALTGIASREAILMALRRRVRPEALPL
                     NQRALEAGFRLGAAATAPV"
BASE COUNT          272 a          602 c          619 g          268 t
ORIGIN      
        1 gagctcaacc tcggccagct ggtcggaccg atccgggcgg cggtggaggg gcggacgcga
       61 gtcgtggcac tcaaccgcgc ggatggcctg gtcttcactc ccgacgagat cgccggatcg
      121 attcagcgct cgctcgagaa acattcggtc gcggaggccc atcatgccta gaatgggcga
      181 agacctgcac cgcttccttc gcaccgagct gatgccgggg gtgtggtgcc ccggatgcgg
      241 gcacggcaac gtgctgcgcg gcatcgccac ggcgctggat cggcagcacc gggacctgga
      301 ccgggtggtt tgcgtgggcg ggatcggttg cgccggacgg tcgccgttct acctcaacac
      361 ttcggcgatg cacaccaccc acggccgggc gctggcgttc gcgacagggc tcaagaccgc
      421 ccgccccgac ctcacggtgc tggtcacgat gggcgacggc gacgccgcgg ccatcggcgg
      481 taaccacttc atccacgcct gccgccggaa tctggacctc accgccatca tctataacaa
      541 tggcacctac ggtatgaccg gcgggcagca ggcgcccacc actccgtcgg ggatgcgctc
      601 taccaccacc ccactcggcg cgatcgagca gcccttcgac atctcggagc tggcccgcgc
      661 cgccggcgca agctacgtcg cccggaccac gacgttcgat ttcgaggagc tgccgaccta
      721 catcgccgag gccatcgccc atcccggctt tgccgtggtc gaggtgctga cccagtgtcc
      781 gacctatttc gggcggctca accacctggg cgatcctgcg accatgctcg actacgagcg
      841 ggacctcacc ttcccggtcg agccgatgac ccgggaccag gtggcggggc agcttcccgt
      901 cggccggttc cgccaggaga tccggccgga gttcaccaac cgctatgcgg ccctgtgcga
      961 ccgggcccgt gcggcagcgg agaaggagac agcgttagca gaggcggaac cgacggggga
     1021 gatgcgggcg ctgcctcacg atccctacca ggtacggttc tcgggcgcag ggggccaggg
     1081 cgtcattctc gccggcgtcc tgctggccga cgccgcctgt gccgaagggc tgcaggcagt
     1141 gcacacccag agctacggcc cggaggcgag aggcggcgcg tgcaagtcgg aggtggtgct
     1201 ctcgagcgaa gagatcgcct tccccgaggt ggaccgaccc gatgcagtgg tctgcctctc
     1261 ggcggaggcc atgcgcaaat acccggccct ggccggcagt cttcggctgg tggaagagcg
     1321 ggcctgcatg gaccagccgc cggccgagca tgacatcgtg ctgccggtgg tccgggcggc
     1381 ggtcgaggct ggcggcgagc tggcggtcaa tgtcgtggcc ctcggcgccc tggccgcatt
     1441 gaccgggatc gcttcccgcg aggccatcct catggcactg cggcggcggg tccggcccga
     1501 ggcgttgcca ctcaaccagc gggcgctgga agcagggttc cggctggggg ctgcggcaac
     1561 cgcgccggtt tgagcgtcaa ctgataggga gtgggccggc acctgactgc tcagcaagtg
     1621 agcccggtgc cggccctgct cattccaggt gccccgttcc ggcgggctac ctcggcgtga
     1681 acccatgccg cgcaagctgg tccgccgaca tgtggatcac atcgatgtgg agcggaatcg
     1741 gcttaagcgg cgcatcggtc g
//
LOCUS       DATIFF010000846         1871 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_567544, whole genome shotgun sequence.
ACCESSION   DATIFF010000846 DATIFF010000000
VERSION     DATIFF010000846.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1871
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_567544"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(111..803)
                     /locus_tag="VLD58_12410"
     CDS             complement(111..803)
                     /locus_tag="VLD58_12410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB55158.1"
                     /translation="MLEATDLRKIYRGGDGNPIEVLAGADLAVGRGEFVAIVGASGAG
                     KSTLLHLLGALDRPTSGTVRLDGEAYNELTPAELARVRNRKLGFVFQFHHLLREFTAL
                     ENVMLPLLVAGASEAEARSRAEQLLARVGLAGRMTHRPSALSGGEQQRTAVARALATD
                     PVVVLADEPSGNLDHGHSELLHDLFAGLAREFETALVVVTHNRLLAARADRVLSLESG
                     RLVPLSGVESMP"
     gene            complement(825..>1871)
                     /locus_tag="VLD58_12415"
     CDS             complement(825..>1871)
                     /locus_tag="VLD58_12415"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSB55159.1"
                     /translation="TFGAGLRMDDWPRVLAEVRKEPGVVAAAPEVISQAGISAGHDYG
                     EGVNVLGFDPDTGSRSVTTFPQSIRKGDLSFRPTHADVDGAILLGTRLAGRLNVYPGD
                     VVTLVPVTQAKVNPALGVAVPKFWKFEVTGLFDTGMFQYDNQFVVMSRKMAQQFTGLG
                     DAVSGIAVRVTNPDLAPEIGRRLEDRLGYPYRTLDWQTQNASLFSALELEKLAMGLII
                     FFIMVVAAFNIVGTLTMVVADKTREIGILQAMGLTAPSVARIFLAQGAIIGLVGTALG
                     LVGGLVVSYVVDRSGWIRINPAVYFIDHLPVHVEALDVLVVVLTSLAIAVLATLYPSR
                     SAARLTPVEAIRHD"
BASE COUNT          292 a          691 c          619 g          269 t
ORIGIN      
        1 gcccttctcc gcggcgcagc gctcgcagag atgcagcgtc gtgacctgtt cgttcacgat
       61 ctgggtgagg tgaaccaccg cgtcccgctc gtggcagcta tcgcattcca tcagggcatc
      121 gactccacgc cggagagcgg caccaggcgc ccgctctcga ggctcaacac ccggtccgcc
      181 cgggccgcaa gcaggcgatt gtgggtcacg accacgagcg cggtctcgaa ctcccgcgcg
      241 aggcccgcga agagatcgtg cagcagctcg ctgtgcccgt ggtcgaggtt gccggacggc
      301 tcgtccgcga gcaccaccac cgggtccgtg gccagcgccc gggccaccgc ggtccgctgc
      361 tgctccccgc ccgagagcgc cgacgggcgg tgggtcatgc ggcccgccag gcccacccgg
      421 gccagcagct gctccgcccg ggaacgggcc tccgcctccg atgccccggc gacgaggagc
      481 gggagcatca cgttctcgag cgcggtgaac tcgcgcagca ggtggtggaa ctggaagacg
      541 aacccgagct ttcggttccg cacccgggcc agctcggccg gcgtcagctc gttgtacgcc
      601 tcgccgtcga gccgcaccgt ccccgaggtc ggccggtcca gggcgccgag caggtgcagg
      661 agcgtgctct tgcccgcacc gctcgccccc acgatggcga cgaactcgcc ccgacccacg
      721 gccaggtcgg ccccggcgag cacctcgatc gggttgccgt cgccgccccg gtagatcttc
      781 cgcaggtccg ttgcctcgag catcgccacg gctttccccc gccctcagtc gtgccggatc
      841 gcctcgaccg gggtgagccg ggcggccgag cgcgaaggat agagggtcgc gagcacggcg
      901 atcgccaggc tcgtgagaac gaccacgagg acgtccagcg cctcgacgtg caccgggagg
      961 tggtcgatga agtacaccgc ggggttgatc cggatccacc cggagcggtc cacgacgtag
     1021 gaaaccacca ggcccccgac gagcccgagc gccgtcccca ccagcccgat gatggctccc
     1081 tgcgccagga agatccgcgc caccgacggc gcggtgaggc ccatcgcctg gaggatcccg
     1141 atctcccgcg tcttgtccgc caccaccatg gtcagcgttc ccacgatgtt gaaagccgcc
     1201 accaccatga tgaagaaaat aatcagcccc atcgccagct tctcgagctc cagagcgctg
     1261 aacaggctcg cgttctgcgt ctgccagtcg agcgtccggt acgggtatcc tagccggtcc
     1321 tccagccgcc ggccgatctc gggcgcgaga tcggggttgg tcacgcgcac ggcgatgccg
     1381 gagacggcgt cccccaagcc ggtgaactgc tgcgccatct tccgggacat gacgacgaac
     1441 tggttgtcgt actggaacat gcccgtgtcg aagaggccgg tgacctcgaa cttccagaac
     1501 ttcggtaccg ccactcccag cgccgggttc accttggcct gggtgaccgg caccagcgtg
     1561 accacgtcgc cggggtacac gttgagccgg ccggcgagcc gggtccccag caggatagcg
     1621 ccgtccacgt cggcgtgggt cgggcggaac gacaggtcgc cctttctgat cgactggggg
     1681 aacgtcgtga ccgaacggct gcccgtgtcc ggatcgaagc cgaggacgtt cactccctcg
     1741 ccgtaatcgt gcccggcgct gatgcccgcc tggctgatca cctctggcgc cgcggcgacg
     1801 acccccggct ccttccggac ctccgccagt acccggggcc agtcgtccat gcggagaccg
     1861 gcgccgaagg t
//
LOCUS       DATIFF010000847         2078 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2106366, whole genome shotgun sequence.
ACCESSION   DATIFF010000847 DATIFF010000000
VERSION     DATIFF010000847.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2078
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2106366"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..248
                     /locus_tag="VLD58_12420"
     CDS             <1..248
                     /locus_tag="VLD58_12420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55160.1"
                     /translation="FVVDISEQFSRKMESIRCYASQFDGARAAGEIFPTGQDLYSLVE
                     TQNAHYGSLIRTRYGEPFYTDETLKIEDVVALEGQSM"
     gene            284..1465
                     /locus_tag="VLD58_12425"
     CDS             284..1465
                     /locus_tag="VLD58_12425"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HSB55161.1"
                     /translation="MSSDPIYLDHAATTPVRPEVREAMLPFLGGEMFGNPSSGHRFGR
                     AVRAAVEKARNEVAEALGVQPYEIVFTSGGTEADNLAVLGASLHARSQGRPMIAAVAA
                     TEHKAILAAAHEVAHMGGREVLLPVEANGLLRTSALDETLAQRPSVVSAMWVNNETGV
                     IQPVEEIGARCRNAGVPFHSDLVQAFGKVALKLADLPIDFATVSGHKIGGPKGVGALA
                     IRRGSKLAPLQHGGGQQSGVRPGTENVPGIIGLGCAAALAMREQAAELARLDRLRDLL
                     LERLRAHVSDLRVTAESAPRAPHILNIQSPGGDGESILAQLDLAGIAASSGSACTTGS
                     VEPSHVLTAMAVPRDHALSAVRLSLGRETTEAELERVAPEFARAVEKSRRLAAALGRV
                     G"
     gene            1462..>2078
                     /gene="mnmA"
                     /locus_tag="VLD58_12430"
     CDS             1462..>2078
                     /gene="mnmA"
                     /locus_tag="VLD58_12430"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF015042.4"
                     /note="catalyzes a sulfuration reaction to synthesize
                     2-thiouridine at the U34 position of tRNAs; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HSB55162.1"
                     /translation="MSRERVLVAMSGGVDSSVAAAALVEQGYDVVGATMKLFCYGDSV
                     PDRPCCSLDSINDARDVAHRLGIPHYVLNLEDRFGRQVIDNFVAEYARGRTPIPCVRC
                     NSFTKFRDLLAHADALGCDGIATGHYAIARDGALYRGRDRAKDQSYFLWGIPGAVVAR
                     MRTPVGEMTKSETRALARRLGLSTADKPESVEICFVPDDDYVGVLR"
BASE COUNT          317 a          738 c          715 g          308 t
ORIGIN      
        1 cgttcgtggt cgacatcagc gagcagttct cccgcaagat ggaatcaatc cgctgttacg
       61 cgagccagtt cgacggggct cgcgcggccg gtgaaatctt ccccaccggt caggacctct
      121 actcgctggt ggagacccag aacgcccact acggctcgtt gatccgcacc cgctacggtg
      181 agcctttcta taccgacgag accctcaaga tcgaagacgt ggtggcgctc gagggtcaga
      241 gcatgtagca cgttgggcgt ggaacccgac tattttcccc gccatgagtt ccgacccgat
      301 ctacctcgac cacgctgcca ccaccccggt ccgccccgag gtccgggagg ccatgctgcc
      361 attcctgggc ggggagatgt tcggcaaccc gtcgagcggc caccgcttcg ggcgggcggt
      421 ccgggcggca gtggaaaagg cccggaatga ggtggccgag gcgctgggcg tccagcctta
      481 cgaaatcgtg ttcacctctg gcggcaccga ggccgacaac ctcgcggtgc tgggcgcctc
      541 gctccacgcc aggtcgcagg gccggcccat gatcgccgcg gtggccgcca ccgagcacaa
      601 ggcgatcctc gcggcggccc atgaggtcgc ccacatgggc ggacgtgagg tgctgcttcc
      661 ggtggaggca aacgggctcc ttcggacgtc cgcactcgac gagacactgg cccagcgacc
      721 gtcggtggtc tcggcaatgt gggtcaacaa cgagaccggc gtcatccagc cggttgagga
      781 gatcggcgcc cgttgccgca acgccggggt gccctttcac tccgacctgg tacaggcctt
      841 cggcaaggtg gcgctgaagc tcgccgacct gccgatcgac tttgccacgg tttccggtca
      901 caagatcggc gggcccaagg gcgtgggcgc cctggcgatc cgccgcgggt ccaagctcgc
      961 accgctccag cacggcgggg gccagcagtc cggggtccgg cccggcaccg aaaacgtgcc
     1021 cggcatcatc ggcctgggat gcgcggcggc gctggccatg cgggagcagg ccgcagaact
     1081 cgcgcggctg gaccggctgc gcgacctgct gctcgaacgg ctccgcgccc acgtaagcga
     1141 ccttcgcgtc accgctgaat cggctccgcg ggcgccgcac atcctcaaca tccagtcccc
     1201 cggcggcgac ggcgaatcga tccttgccca gctcgacctg gcgggcatcg ccgcgtcgag
     1261 cgggtcggcc tgcaccaccg gcagcgtcga gccctcccac gtcctcaccg ccatggcggt
     1321 tccccgcgac cacgccctga gcgcggtgcg cctgagcctt ggccgcgaga cgaccgaagc
     1381 ggaactcgag cgcgtggcgc cggagtttgc ccgggcggtg gagaagagtc gccggctcgc
     1441 cgcggccctc gggagggtgg gatgagccgc gagcgggtgc tggtggccat gtcgggaggg
     1501 gtggacagct cggtggcggc cgcggccctg gtggagcagg gctacgacgt cgtgggcgct
     1561 accatgaagc tcttctgcta cggcgactcg gtccccgacc gcccctgctg ctcgctcgac
     1621 tcgatcaacg acgcgcggga cgtggcccac cggctcggga tcccgcacta cgtgctcaac
     1681 ctcgaggatc ggttcggacg gcaggtgatc gacaacttcg tcgccgagta cgcccgaggg
     1741 cggacgccga tcccctgcgt ccgctgcaac tcgttcacca agttccgcga cctcctcgcg
     1801 cacgccgacg cgctcggctg cgacgggatc gcgaccggtc actacgcgat cgcgcgggac
     1861 ggcgcgctct accggggccg cgaccgggcc aaggaccaga gctacttcct ctggggcatc
     1921 ccgggcgcgg tggtggcccg gatgcgcacg cccgtgggtg agatgaccaa gagcgagacc
     1981 cgggccctcg cgcgccggct cgggctctcg accgccgaca agccggaatc ggtcgagatc
     2041 tgcttcgtcc ccgacgacga ttacgtcggc gtgctccg
//
LOCUS       DATIFF010000848         3797 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_874033, whole genome shotgun sequence.
ACCESSION   DATIFF010000848 DATIFF010000000
VERSION     DATIFF010000848.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3797
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_874033"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1706
                     /locus_tag="VLD58_12435"
     CDS             <1..1706
                     /locus_tag="VLD58_12435"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSB55163.1"
                     /translation="TDAKGSVEYLNPVAEQLLGAPTSELAGRHISDVLSLVHEQTRDP
                     LENPVETCLREGRIVGRSNLSLLVRPDGREFAIDDSAAPIRDAEGDVIGAVLVFHDVS
                     RARTLARQLAHQASHDFLTGLVNRHEFERRVGRALQRSQQEAVTHALCFLDLDQFKVV
                     NDTCGHGAGDELLRQLANALQKKVRRRDTLARLGGDEFGVLLEHCPPGQATRVAHELL
                     EAVQEFRFVWEGKPFALGVSIGVVPITGESESLAVVLRDADAACYAAKERGRNRVHFY
                     EPNDAAMALRQGEMQWVSRITSALEENRFRLYGQAIVPLVPRQGERARVEVLLRMVER
                     NGDLIAPGAFIPAAERYNLMGAVDRWVVKEVVSLYATHQASGWQPIASINLSGASLGD
                     PSMLPYVRDQLARHDLSPESLCFEITETAAIANLGLAAHFIRELKGMGCWFALDDFGS
                     GMSSFAYLQSLPVDSLKIAGAFLRHIETDPVEYAMVEAIHRVGHVMRLKTVAEGVESL
                     DTLETLRRIGVDYAQGYAIAEPRPLEELVALAINPGRAAERPRTTSHPSTTPRPRQAS
                     V"
     gene            complement(1703..3124)
                     /locus_tag="VLD58_12440"
     CDS             complement(1703..3124)
                     /locus_tag="VLD58_12440"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HSB55164.1"
                     /translation="MNLGRLAFPALRWRPATGFSHEDGAIDEALRLGVGGFIVFGVPG
                     ARADEIGRLTEELRRRAGRPLLIGSDLERGAGQQARRLTEIPPPGALASLGDDEVVHW
                     AGATTAREALSIGINWVFAPDADLDIEPRNPIVQTRSFGADPALVARNVSLWVKGCQE
                     EGALACAKHYPGHGRTTADSHNVMPTVKAPFEELAATDLRPFAAAVNSGVASVMTAHV
                     AFPSWDPSGAPATRSRTILEYLRATLGFEGLVVTDAFIMEGARAGLSEAQAAANSIAV
                     GCDILLYPGDLPGTLMALERAVTDGGLPAARIEAALSRYQRALDRIAAPSASPGTATL
                     TYRDVAMRLLERGLTRGPLPELSGGIELAVVDDDVGGWYAPGPSDYVIRWLARHGVHE
                     RFGGKRVVLAFAEPRAAKGRPGFGPASLERLGELAKDAALIVLFAHPRLVAELPGNCP
                     VLVAWHRQRLMQETVAEWLANRV"
     gene            complement(3121..>3797)
                     /locus_tag="VLD58_12445"
     CDS             complement(3121..>3797)
                     /locus_tag="VLD58_12445"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: protein motif:HMM:NF015647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HSB55165.1"
                     /translation="VPMADVLLFGHPDHGRVLLNIGGMANFTHVPRRALEIGTLACDT
                     GPGVAVIDAVARLVDPTLGFDVDGRLARRGRADETVLAKLLADPFFAARPPKSTGRER
                     FGPDYARALHREVPGVDGVATAVELTARTIADAIRRFAPDAPEVIGSGGGMRHPVLVE
                     RLTTLLKAAGVPLLNFDDLFFTGGAKEAVAFALLGYLCIHGQPGNLPSATGASGSRIL
                     GQITPA"
BASE COUNT          613 a         1335 c         1313 g          536 t
ORIGIN      
        1 ggaccgatgc caagggctcg gtcgagtatc tcaatccggt ggcggaacag ctgctgggcg
       61 cgcccacgtc ggagctcgcg ggccgccaca tctcggacgt gctctcgctg gtgcacgagc
      121 agacccgcga tccgctggaa aatccggtcg agacctgcct ccgcgaaggg cggatcgtgg
      181 ggcgctccaa cctctcactc ctggtccgcc cggatggccg cgagttcgcc atcgacgaca
      241 gcgcggcccc gattcgggac gccgaaggcg atgtcatcgg cgcggtgctg gtgttccatg
      301 acgtgagccg ggcccggacc ctggcccgcc agctggccca ccaggcttcg cacgacttcc
      361 tcaccggcct ggtcaatcgc cacgagttcg agcggcgggt gggtcgggcg ctccagcggt
      421 cgcagcagga agcggtcacc cacgccctct gcttcctgga cctggaccag ttcaaggtgg
      481 tcaacgacac ctgcggccat ggcgccggcg acgagctgct ccggcagctg gcgaacgcgc
      541 tccagaagaa ggtgcgccgc cgcgatacac tcgcccgcct cggcggcgat gagttcggag
      601 tgttactgga gcattgtccg ccgggccagg ccacgcgggt ggcgcacgag ctgctggagg
      661 cggtacagga gttccgcttc gtgtgggaag gcaagccgtt cgcgctgggc gtgagcatcg
      721 gcgtggtgcc gatcaccggc gagagcgaga gcctggcggt ggtgctgcgc gatgccgacg
      781 cggcctgcta cgccgccaag gagcggggcc gcaaccgggt ccatttctac gaacccaacg
      841 acgccgccat ggcgctccgc cagggcgaga tgcagtgggt cagccgcatc acctcggcgc
      901 tcgaggaaaa ccggttccgg ctctacgggc aggccatcgt gccgctggtg ccgcgccagg
      961 gcgaacgggc ccgggtcgag gtgctgctcc gcatggtgga acggaacggc gatctcatcg
     1021 cgccgggcgc gttcatcccg gcggcggagc ggtacaacct gatgggcgcg gtggaccgct
     1081 gggtggtgaa ggaagtggtc tcgctctacg ccacccacca ggccagcggc tggcagccga
     1141 ttgcctcgat caatctctcg ggcgcctcgc tcggcgaccc cagcatgctc ccctacgtgc
     1201 gcgaccagct ggcccggcac gatctctcgc ccgaatcact ctgcttcgag atcaccgaaa
     1261 cagccgcgat cgcgaacctg ggactggcgg cgcatttcat ccgcgagctc aaggggatgg
     1321 gctgctggtt cgcgctggat gacttcggca gtggaatgtc gtccttcgcc tacctccaga
     1381 gcctaccggt cgattcactc aagatcgccg gggcgttcct gcgccacatc gagaccgatc
     1441 cggtcgagta cgcgatggtg gaggcgattc accgggtggg ccacgtgatg cggctcaaga
     1501 cagtggcgga aggggtggag agtctcgaca cgctggagac cctccggagg atcggggtgg
     1561 actacgccca gggctacgcg attgccgagc ccaggccact cgaggagctg gtggcgctcg
     1621 ccatcaaccc gggccgggcg gcggaacgcc cgcgcacgac gtcacacccg tcgaccaccc
     1681 cgcggccacg gcaggcgagc gtctagaccc ggttcgccag ccactccgcc acggtctcct
     1741 gcatgagccg ctggcggtgc caggccacca gcaccggaca gttaccggga agttccgcca
     1801 ccagcctcgg gtgcgcgaac agcacgatca gcgcggcgtc cttcgccagc tcgcctagac
     1861 gctcgagact cgccggcccg aacccgggcc gccccttggc cgcccgcggt tccgcaaagg
     1921 ccagcaccac ccgcttcccg ccgaatcgtt cgtgcacgcc gtgccgcgcc agccagcgaa
     1981 tgacgtagtc gcttgggcca ggcgcatacc atccgccgac gtcgtcatcc accacagcca
     2041 gctcgatccc gccggaaagc tcggggagcg gcccgcgggt gaggccgcgc tccagcagcc
     2101 gcatggcgac atcgcggtag gtgagcgtgg ccgtgccggg tgacgcggat ggtgccgcga
     2161 tgcgatccag cgcgcgctga taccggctga gcgccgcctc gatccgcgcg gccggcagcc
     2221 cgccatcggt caccgcccgc tcgagcgcca tcagagtgcc gggcaggtcg cctggataga
     2281 gcaggatgtc acagcccacc gcgatcgagt tggccgcagc ctgggcctcg ctaagtccgg
     2341 cgcgcgcccc ttccatgatg aaggcatcgg tcaccaccag gccctcgaag ccgagcgtgg
     2401 cgcggaggta ctcgagaata gtgcggctgc gggtggcggg ggccccgctc ggatcccagg
     2461 aggggaaagc cacgtgggcg gtcatgaccg aggccacacc cgagttcacc gccgcagcga
     2521 atggcctgag atcggtcgcg gccagctcct cgaacggcgc cttcaccgtc ggcatcacgt
     2581 tgtgcgagtc ggccgtggtg cggccatgcc ccgggtaatg cttggcgcag gccagcgccc
     2641 cctcttcctg acaccccttc acccagagcg agacattccg ggccaccaga gccgggtcgg
     2701 cgccgaacga ccgggtctgg acgatcggat tgcgcggctc gatatcgaga tcggcatcgg
     2761 gcgcgaagac ccagttgatc ccgatgctca acgcctcccg cgccgtcgtg gctccggccc
     2821 agtggaccac ctcgtcatcg cccagcgacg cgagtgcccc cggcggtggg atctcggtga
     2881 gccggcgagc ctgctgcccc gccccgcgct ccaggtcgga gccgatcagg agcggccggc
     2941 ccgcccgccg ccggagttcc tccgtgagcc ggccgatctc gtcggctcgg gcgccgggaa
     3001 cgccgaagac gatgaacccc ccgacaccga gccggagcgc ctcgtcgatc gcgccatctt
     3061 cgtgggaaaa gccggtagcg ggtcgccacc ggagcgcggg aaaggcaagc cgccccaggt
     3121 tcatgcgggc gtgatctgtc cgagaatgcg ggagccgctc gcgccggtgg cggagggaag
     3181 attcccgggc tggccgtgga tgcagaggta gcccaagagc gcaaaggcaa ccgcttcctt
     3241 ggcgccgccg gtgaagaaca ggtcgtcgaa attgagaagc ggcacgcccg cggctttgag
     3301 aagcgtggtc agacgctcga ccagcaccgg atgacgcatt cccccgccgg agccgatcac
     3361 ctcgggcgca tccggtgcaa aacgccgaat cgcgtcggcg atggtccgcg ccgtcagctc
     3421 gacggccgtg gcgacaccat ccacgccggg aacctcacgg tggagcgccc tggcatagtc
     3481 cggcccgaat cgctcccgcc cggtgctctt ggggggccgg gccgcgaaga acgggtcggc
     3541 gaggagtttc gcgagcacgg tctcgtccgc tcttccccgc cgtgcaagcc ggccgtccac
     3601 atcgaagccg agcgtgggat cgaccagccg ggccacggcg tcgatcacgg ccacgcccgg
     3661 accggtgtcg catgcgagcg tccctatctc gagcgcccga cgcggcacat gggtgaagtt
     3721 ggccatgccc ccgatgttga gcaggacccg cccgtgatcg ggatgaccga agagcaggac
     3781 atcggccatc ggcacta
//
LOCUS       DATIFF010000849         1079 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_874055, whole genome shotgun sequence.
ACCESSION   DATIFF010000849 DATIFF010000000
VERSION     DATIFF010000849.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_874055"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            175..726
                     /locus_tag="VLD58_12450"
     CDS             175..726
                     /locus_tag="VLD58_12450"
                     /inference="COORDINATES: protein motif:HMM:TIGR01670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase family protein"
                     /protein_id="HSB55166.1"
                     /translation="MIDPAVAGRIKLLGLDVDGVVTNNAIYLGLVNDQRIEFKQFDIQ
                     DGLAMGLARRMGMVLAWVSGRYSDATVLRATELHIEELIQDRGARKVPGMTEMLLRLG
                     IGWDEVAFLGDDLADIPVLRRVGLPMAVSNAVDEVKALAAYTTTARGGEGAVREAIEA
                     LFRAQGRWDAAVKTYLEDRGEAW"
     gene            723..>1079
                     /gene="lptC"
                     /locus_tag="VLD58_12455"
     CDS             723..>1079
                     /gene="lptC"
                     /locus_tag="VLD58_12455"
                     /inference="COORDINATES: protein motif:HMM:TIGR04409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HSB55167.1"
                     /translation="MRARLLLVATGFAAVLACREVGVRPTTTMTAADSADQILETMDF
                     NLTTDGVRRTRVIADTAYLYETTQLARLKKVKVTFYDVSGVERSTVIGDSGIYQMREG
                     SMETWGHVVGTTPDGKK"
BASE COUNT          189 a          334 c          387 g          169 t
ORIGIN      
        1 cgcgggagcg ggcgggttct ttctcgaaac ccatcccgca cccgagctgg ccttgagcga
       61 tgccgcgacc cagtggccgc tgcacgagct cgaagaactg atgcgccgga ccctcgagat
      121 atggcatgcc gcgcgggcgg gattctccgc cggagcgccg cgggaccggg gcacatgatc
      181 gacccggccg tcgccggacg gatcaagctg ctgggcctcg atgtggatgg cgtggtcacc
      241 aacaacgcca tctatctcgg cctggtgaac gaccagcgga tcgagttcaa gcagttcgac
      301 atccaggacg gcctcgcgat ggggctggcc cgccggatgg ggatggtgct cgcatgggtg
      361 agcggtcggt actccgacgc tacggtactc cgcgccaccg agctccacat cgaagagctg
      421 atccaggaca ggggcgcccg caaggtcccc ggcatgaccg agatgctcct ccgcctcggc
      481 attggctggg acgaggtcgc gttcctcggg gatgatctgg ccgatatccc ggtgctgcgg
      541 cgggtgggtt tgccgatggc ggtttcgaat gcggtcgacg aagtgaaggc gctggcggcc
      601 tacaccacca cggcgagggg cggggaaggg gcggtgcggg aagcgatcga ggccctgttc
      661 cgggcccagg gccgctggga cgccgccgtg aagacctatc tcgaggatcg gggagaagcg
      721 tggtgagagc tcgtctgctg ctggtagcca ccggatttgc cgcagtcctc gcctgccgcg
      781 aggtcggcgt ccgacccacg accaccatga ccgcggcgga ttcggccgac cagatcctcg
      841 agacgatgga cttcaacctg accaccgacg gggtgcggcg gacgcgggtg attgccgaca
      901 cggcatatct ctatgagacc acccagcttg cccgtctcaa gaaggtgaag gtcaccttct
      961 acgacgtgag cggggtcgag cgctcgaccg tgatcggcga ttcgggcatc tatcagatgc
     1021 gcgaaggctc gatggaaacg tggggccacg tggtggggac cacacccgac ggcaagaag
//
LOCUS       DATIFF010000850         1057 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_261346, whole genome shotgun sequence.
ACCESSION   DATIFF010000850 DATIFF010000000
VERSION     DATIFF010000850.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261346"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..654)
                     /locus_tag="VLD58_12460"
     CDS             complement(67..654)
                     /locus_tag="VLD58_12460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003155741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HSB55168.1"
                     /translation="MSTADQTLGLQKDALAQAGCERLFSDTASGSRADRPGLDEALDF
                     LRPGDTLVVWRLDRLGRSLRHLIDTLGALDQRGIGFRSLQEQIDTTTSGGKLVFHVFG
                     ALAEFERDLIRERTQAGLEAARARGRRGGRPKALDPRKAAIAQALYNDKTNAIADICR
                     TLRISRATLYRSITPGPQRARPETVPPEPAPADAT"
     gene            complement(700..897)
                     /locus_tag="VLD58_12465"
     CDS             complement(700..897)
                     /locus_tag="VLD58_12465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55169.1"
                     /translation="MASDEQKRRLLKAKIAVALRDELGRVPTSKEIEQVFLLTRVMYK
                     AVLGLHYRRKEQRRTGQLAIF"
BASE COUNT          162 a          325 c          392 g          178 t
ORIGIN      
        1 ccgctggtcg gaggcggggg gcgtcagctc ggtgagatgt tcgtccgacg tgtgtcgagt
       61 cacggatcat gttgcgtccg ccggtgccgg ctcgggcggg accgtctccg gccgggcccg
      121 ctgcgggccc ggggtgatgg accggtacag ggtggcccgg gagatgcgca gggtgcggca
      181 gatgtcggcg atcgcgttgg tcttgtcgtt gtacagcgcc tgggcgatcg ccgccttccg
      241 tgggtccagg gccttggggc gacccccgcg ccggccgcgg gcgcgcgcgg cctcgagccc
      301 ggcctgggtg cgttcgcgga tgaggtcgcg ttcgaactcg gcgagggcgc cgaagacgtg
      361 gaagaccagc ttgccgccgc tggtggtggt gtcgatctgt tcctgcaggg accggaagcc
      421 gatgccccgc tggtccaaag ctccgagcgt gtcgatgagg tgacgcagcg agcggcccag
      481 ccggtccagc cgccagacga cgagggtgtc cccggggcgc aggaagtcca gcgcctcgtc
      541 cagcccgggg cgatcggcgc gggagccgct ggcggtgtcg ctgaacagtc gctcgcaccc
      601 ggcctgggcc agggcgtctt tctgcaggcc gagggtctgg tcggcggtgg acacccgggc
      661 gtagcaacga gcatgacggt ggtcgcagcg ggaggccggc tagaagatcg ctagctggcc
      721 ggtgcgccgc tgctcctttc tgcggtagtg caggcccagc acggccttgt acatcacccg
      781 ggtcagcagg aacacctgct cgatctcctt cgacgtgggc acccggccga gctcgtcccg
      841 cagcgccacg gcgatcttcg ccttgagcag tcgccgcttc tgttcatcac tcgccatact
      901 cgataattat ctcaaaagac gtcgagaaag tcaagaagcg gaacataggt ttagagatgg
      961 gttatcagac ggaacggcag gcacgacggc gggagcgaaa ctgagatgcc agggccgtct
     1021 catatacctt cgtttatgaa acgacctcga ggtagcg
//
LOCUS       DATIFF010000851         1083 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1491634, whole genome shotgun sequence.
ACCESSION   DATIFF010000851 DATIFF010000000
VERSION     DATIFF010000851.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1491634"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..936)
                     /locus_tag="VLD58_12470"
     CDS             complement(<1..936)
                     /locus_tag="VLD58_12470"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HSB55170.1"
                     /translation="MIRGNRLAYEWYPRWSGPNTRHGLGAMAKATTGELALLVEASDR
                     RVAYEDFAAQYIPPWRNDSLRSKIRLEDLAAHQSGLATEDFGTPQGGWQQPYFKHPEW
                     RFRIALGDVPIVYPPGTRYNYAGSGYYVLAYALTAALHNAPYHDIPTLLRERIMRPMG
                     VPDADWQLSYGQSYPMDGMTLYAMGSGASYTARAAARVGQLILDHGRWGTQQLLDSAL
                     VAWSIRPATVPLPADEGGYRRPPSTQGGGWSVNARASWPEVPRDAIAGMGTGHEIILV
                     VPSLDLVMVRMGKALSSDADFGPVLRDRLFAPLMRA"
BASE COUNT          168 a          375 c          376 g          164 t
ORIGIN      
        1 cgcgcgcatg agcggcgcga agagacggtc gcgcaggacc gggccgaagt cggcgtccga
       61 cgacaaggcc tttcccatcc ggaccatcac cagatcgagg ctcgggacga ccaggatgat
      121 ctcgtgtccc gtgcccatgc cggcgatggc gtcacggggc acctccggcc agctcgcccg
      181 tgcattcacc gaccagccgc cgccctgcgt cgagggaggg cgccggtagc cgccctcgtc
      241 cgccggcaga ggaacggtgg cggggcggat actccaggcg acgagggcgg aatccagcag
      301 ctgctgtgtc ccccacctcc cgtggtccag gatcaactgt cctacccgcg ctgccgctcg
      361 ggcggtgtac gaggcgccgc tgcccatggc atagagcgtc atcccgtcca tggggtagga
      421 ctgcccgtaa ctcagctgcc aatcggcatc gggcacgccc atcggtcgca tgatgcgctc
      481 ccggagcagc gtcgggatgt cgtggtacgg cgcattgtgc aaggcggccg tgagcgcgta
      541 ggcgaggacg tagtatcccg atccggcgta gttgtaccgg gtgcccggcg gatacacgat
      601 cggcacatct cccagagcga ttctgaatcg ccactcggga tgcttgaagt agggctgctg
      661 ccaccctcct tggggggtgc cgaaatcctc ggtggccaga ccggactggt gggcggcgag
      721 gtcctcgagc cggatcttcg agcggagtga gtcgttgcgc cagggcggga tgtactgggc
      781 tgcgaaatcc tcgtacgcga cccgccggtc gctggcctcg acgaggagcg ccaactcacc
      841 cgtcgtcgcc ttggccatcg cacccaggcc gtggcgggtg ttgggccccg accaccgcgg
      901 gtaccactcg taagcgaggc ggttgccccg gatcacgagg aacgcctcag tccccgccgc
      961 tgccagggaa tcacgcagac tgtcgagccg ggcgcgattc agcccctcgt cctcgggagc
     1021 tgcggtgctc cacgctacgc cgggcctcgg tctcccccga agccggcgag cggcccgagc
     1081 cgc
//
LOCUS       DATIFF010000852         1892 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1952611, whole genome shotgun sequence.
ACCESSION   DATIFF010000852 DATIFF010000000
VERSION     DATIFF010000852.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1952611"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..573)
                     /locus_tag="VLD58_12475"
     CDS             complement(<1..573)
                     /locus_tag="VLD58_12475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55171.1"
                     /translation="MSPGVPSISAVLLALTVGARTGEKPLVQVAGPCATVFKAQVCTW
                     AKTKGNNLVEAGAVVPLASIENAPADQAMVWPPAAAAVIDMPEPVPHQGGLTQLTMYW
                     EAGGHPPAPFLTPHFDFHFYTVAASERAAMDCKDVSKPASLPAAYGLPDVPLPPEMAQ
                     MTGVPALIGVCVPQMGMHALLQSEIERKDAF"
     gene            complement(733..805)
                     /locus_tag="VLD58_12480"
     tRNA            complement(733..805)
                     /locus_tag="VLD58_12480"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(770..772),aa:Ile,seq:cat)
     gene            complement(942..>1892)
                     /locus_tag="VLD58_12485"
     CDS             complement(942..>1892)
                     /locus_tag="VLD58_12485"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HSB55172.1"
                     /translation="GDAMLDVYLAGEVDRISPEAPVPVVTVRQRRVALGGAGNVAANV
                     AAIGAECRLVAPIGDDARGDSLRSELAQHRLSDAWLVVVPERPTTSKTRVVARGQQVV
                     RIDEEVDDPVPDRSAQALIAALERAMADADALLIEDYNKGALTPAVIERAMAVARRRG
                     VPVVVDPKFRHFFAYRGATVFKPNRRELEQAMGAALDLAHPDALPAVLDRLGVDNLLL
                     TLGAEGMGLLTKDRQLTRIPALAREVYDVSGAGDTVTAWVGTALAAGATVREAAEVAT
                     YAAGIEVGKAGVSTVSPAEVVAAYDAAQDQVGRLRRSGLL"
BASE COUNT          295 a          648 c          653 g          296 t
ORIGIN      
        1 gaacgcgtcc ttgcgctcga tctccgactg gaggagtgcg tgcatcccca tctgcggaac
       61 gcaaacgccg atcagcgcgg gcacgcccgt catctgggcc atctccggcg gtagtgggac
      121 gtcggggagg ccgtacgcgg ccgggaggga ggccggcttg ctcacgtcct tgcagtccat
      181 tgccgcccgc tcggaggcgg cgactgtata gaagtgaaag tcgaaatgcg gcgtcaggaa
      241 cggggccggc gggtgtccac cggcttccca gtacatggtg agttgggtga ggccgccctg
      301 gtggggcacg ggttccggca tgtcgatcac cgcggcagcg gcgggcggcc acaccatcgc
      361 ctggtcggcg ggcgcattct cgatacttgc cagcggcacc accgctccgg cctcgaccag
      421 attgtttccc ttggtcttgg cccaggtgca tacctgtgct ttgaagacag tggcgcatgg
      481 tcccgccacc tgcacgagag gcttttcgcc cgtgcgggcg cccacggtga gcgccagcag
      541 gacggcggaa atgctcggga cacctgggga catggtgctc ctttggttgt gagtggaaga
      601 gcgggctcgt ggctgggccc tggagcaaag agactgtaac cggacgaggt ggagacccgc
      661 cggtggtctc aatcgtcact gagcgacccc gcgcctgacc gggaagccgc aggcggtaca
      721 tcgctatccg aatgggccct ccaggatttg aacctgggac cgacggatta tgagtccgct
      781 gctctaacca ctgagctaag ggcccgattg cgagggggaa gatataacgc tcgggaggag
      841 cattgcggat tgcggattgg ggattgcgga ttgtcccgtg ggggcccacg ggtccgaaaa
      901 tgcacatgtc caatccccaa tccgcaatcg tcaatccgca atcacagcag cccgctcctc
      961 cgcagccgcc ccacctgatc ctgcgcggca tcgtaggccg caacgacctc cgccgggctg
     1021 acggtggata cgccggcctt gccgacctcg atgccggcgg cataggtggc cacctcagcc
     1081 gcctcgcgca cggtcgcgcc cgcggccagc gcggtgccca cccaggccgt gacggtgtcg
     1141 cccgcgccgg agacgtcgta cacctcgcgg gccagcgccg gaatgcgggt cagctgccgg
     1201 tccttggtca gcaatcccat cccctcggcg ccgagggtga ggagcaggtt gtccacgccg
     1261 agccggtcga gcacggcggg cagtgcgtcg ggatgcgcca ggtcgagcgc cgcgcccatc
     1321 gcctgctcga gctcccggcg gttgggcttg aacaccgtgg ccccgcgata cgcgaagaaa
     1381 tggcggaatt tggggtcgac gaccaccggc acgccgcgtc gtcgcgccac ggccatcgcc
     1441 cgctcgatca ccgcgggggt gagtgcgccc ttgttgtagt cctcgatcag cagtgcgtcg
     1501 gcatcggcca tggcccgctc caaggccgcg atcagcgcct gggccgaacg gtccggcacg
     1561 ggatcgtcca cttcctcgtc gatgcggact acctgctggc cacgggccac cacgcgggtc
     1621 ttggacgtgg tgggccgctc gggcaccacc acgagccagg cgtcgctgag ccggtgctgg
     1681 gcgagctcac tgcgcaacga gtcgccgcgc gcgtcgtccc cgatcggcgc taccagccgg
     1741 cattcggcgc cgatcgccgc cacgttggcc gcgacgttgc ccgcaccgcc gagcgccacc
     1801 cggcgctggc gcaccgtgac gaccgggacc ggtgcctcgg gcgagatccg gtccacctcg
     1861 ccggccagat acacgtccaa catcgcgtcg cc
//
LOCUS       DATIFF010000853         5117 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1798419, whole genome shotgun sequence.
ACCESSION   DATIFF010000853 DATIFF010000000
VERSION     DATIFF010000853.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5117
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1798419"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..391)
                     /locus_tag="VLD58_12490"
     CDS             complement(<1..391)
                     /locus_tag="VLD58_12490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyceraldehyde 3-phosphate dehydrogenase
                     NAD-binding domain-containing protein"
                     /protein_id="HSB55173.1"
                     /translation="MPIKVAINGFGRIGRNVLRAAKKLGAKELDFVAVNDLTDTRTLA
                     HLLTYDSVHGRFAGTVEARQDALVVDGDSIKVFAQKDPAALPWKDLGVDIVLESTGLF
                     TDREKAAKHLEGGARKVVISAPGKKEDI"
     gene            complement(428..1174)
                     /locus_tag="VLD58_12495"
     CDS             complement(428..1174)
                     /locus_tag="VLD58_12495"
                     /inference="COORDINATES: protein motif:HMM:NF012383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HSB55174.1"
                     /translation="MRRFAEALATLERAERWLLPGACLLCQEVASATDADPLVCDLCL
                     GRLRRLSHPQCSRCGEPHGGLTEPCRVCADWPTAFGPVRSAVWLDDQARSVIHHLKYG
                     GWRRVADSLGRLMLPVLEAPMDAVLAPIPLSSRRLRRRGYNQAEALAQALGRLSGRLV
                     RTDLLRRTRETPTQTTLAPEARQANVHAAFEVPPPVHSLLRKSGFPVILIDDVFTTGA
                     TLRSAASALLEGGTKRVGAVTFARALPPLG"
     gene            complement(1158..1961)
                     /locus_tag="VLD58_12500"
     CDS             complement(1158..1961)
                     /locus_tag="VLD58_12500"
                     /inference="COORDINATES: protein motif:HMM:NF020090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55175.1"
                     /translation="MIGGKTRVFAILGDPVAHSLSPAMHNAAFRALGLDAVYVALRAA
                     AADVPALLSVLARAGGGGNVTVPHKELAAAAVTHPTPRVSALGACNTYWGNGAEVHGD
                     NTDVDGILTALEQLEAPATAWLIAGTGGGARAAVAAAVTAKAKVAIRSRDTGRRREFE
                     TWASGQGAVIVTGGDCDVLINSTPLGLKPGDHLPLALDLAPRAQVAFDMVYCRGETAW
                     VRQMRQEGLRAADGRVMLVAQGAAAFRRWFPDEVPPTEVMRAAVNEALR"
     gene            complement(1948..2421)
                     /locus_tag="VLD58_12505"
     CDS             complement(1948..2421)
                     /locus_tag="VLD58_12505"
                     /inference="COORDINATES: protein motif:HMM:NF013607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight protein arginine
                     phosphatase"
                     /protein_id="HSB55176.1"
                     /translation="MTHILLVCTGNTCRSPLAEALLRKKLAERSVDGVEVSSAGTGAW
                     DGAPASEGAYLVALEHGLDLSAHRARLLTRELVGSADVVLTMARHHRARVEQLGTGIQ
                     AHLLGEYAGRTGAEAEVRDPFGGDLEGYRETFIELDAMLGGVVERLERERLGDRR"
     gene            complement(2445..3149)
                     /gene="ispD"
                     /locus_tag="VLD58_12510"
     CDS             complement(2445..3149)
                     /gene="ispD"
                     /locus_tag="VLD58_12510"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: protein motif:HMM:NF013308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HSB55177.1"
                     /translation="MPRDIGVVIVAAGQGSRMGGGTPKQYRDLAGIPMLLRSLRPFTA
                     HPDVEHVVVVLPPGDVAAPPPWLAGLIGGSLSLVAGGAERSDSVSHGLSALPGHCAIV
                     LVHDAARPLVDRPTIDRVVAVARSGAGAVPAIPLGDTLKEAAPDDPALRIRGTVPRER
                     LWRAQTPQGFSRPLLEEAYARARGEGVRGTDDAMLLERLGATVRLVPGSSLNFKVTTD
                     EDFRLAELVVRSRSEE"
     gene            complement(3139..4512)
                     /gene="radA"
                     /locus_tag="VLD58_12515"
     CDS             complement(3139..4512)
                     /gene="radA"
                     /locus_tag="VLD58_12515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HSB55178.1"
                     /translation="MAKPRSVYRCTDCGHDHPKWVGKCEACGAWNTVAEEPIAVARGG
                     GASGRVRGAGITPGGAPPARLRDIAESRLVRWSTGLPELDFVLGSGIVPGSMTLVGGE
                     PGIGKSTLLLQAAARLEASGRKVLYASGEESPEQIRLRASRLEEDAGPVHVLGETRLE
                     AILDSAQTLGADLLILDSIQTVYTDALESAPGNVGQVRECAARLMRFAKETGAAVMVV
                     GHVTKGGGIAGPKTLEHIVDTVLYFEGEATLDHRLLRATKNRFGSVDEIGVFSMTGHG
                     LEPVANPSALFLAARATGSAGSAVTALMEGTRPMLVEVQALAARSGFGTPQRVATGLD
                     HKRLAVLLAVLERRGGTSFADLDVFVQVTAGVRLTEPGSDLAVAAALLSSVLNRPAPP
                     DALFLGELGLGGEVRPIGGLERRLVEAARLGFRRVFVSGRTGTNVSGLTLIGLDHVEG
                     LVQALAA"
     gene            complement(4505..>5117)
                     /locus_tag="VLD58_12520"
     CDS             complement(4505..>5117)
                     /locus_tag="VLD58_12520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DnaB-like helicase C-terminal domain-containing
                     protein"
                     /protein_id="HSB55179.1"
                     /translation="LCAEARVDSQRVRRGTLSDTDFTMLARAAGVLSSCPVWIDDTPA
                     LTLLEMRSKARRLKMENDLGVIVVDYLQLMRSPAYAENRVQEISDISRSLKALARELE
                     VPVIALSQLSRASEQRGGERKPILSDLRDSGAIEQDADIVLFIHRPEMYEQIDKDGNS
                     NEGKAELIVAKHRNGPTGTVDLYFHKQFTRFSSLSEREEPEYG"
BASE COUNT          820 a         1754 c         1796 g          747 t
ORIGIN      
        1 tgatgtcttc cttcttgccc ggggcggaga tcaccacctt gcgggcgccg ccctcgaggt
       61 gcttggccgc cttctcccgg tcagtgaaga ggccggtgga ctcgagcacg atgtcgaccc
      121 cgagatcctt ccagggcagc gccgccggat ccttctgagc gaagaccttg atgctgtcgc
      181 cgtccaccac caaggcgtct tgccgggcct ccaccgtccc ggcaaagcgg ccgtgcaccg
      241 agtcgtatgt cagcaggtgc gccagcgttc tggtgtcggt caggtcgttg accgcgacga
      301 agtccagctc cttcgccccc agcttcttgg cggcgcgaag cacattccgg ccgatccggc
      361 cgaatccatt gatggcaact ttgattggca ttccggctcc agctggtgat tggcccactg
      421 gcgatggcta tcccaaaggc ggcaaagctc gcgcaaaggt aaccgcaccc acgcgtttcg
      481 ttccaccctc caggagcgcc gaggccgccg atcgcagggt tgccccggtg gtgaacacat
      541 catcaatcag gatgaccggg aatcccgact tgcgaaggag ggagtggacc ggaggaggta
      601 cttcgaaggc ggcatgcacg ttagcctgac gggcttcagg cgccagggtg gtctgggtag
      661 gggtttcccg agtgcggcgc aggagatcgg tgcggaccag gcgtccgctc agacgcccga
      721 gcgcctgggc cagcgcttcg gcctggttgt agccgcgccg gcggagccgc ctggatgaca
      781 gcggaatcgg ggccagcacc gcgtccatgg gcgcctccag cactggaagc atcaggcggc
      841 caagcgagtc cgcgacccga cgccagccac cgtacttgag atgatgaatg accgagcggg
      901 cctgatcatc cagccacacg gcgctccgga ccggcccaaa ggcagtcggc cagtcagcgc
      961 agacgcggca aggctccgtc agcccgccgt ggggttcgcc gcaacggctg cattgaggat
     1021 gggaaagccg ccgaaggcgg ccgaggcata gatcgcagac caggggatcg gcatcggtcg
     1081 cactggcgac ctcctgacac agcaggcagg cgccgggaag cagccaccgc tcggcccgct
     1141 cgagggtcgc gagtgcctca gcgaagcgcc tcattgaccg cggcgcgcat gacttccgtg
     1201 gggggcactt cgtcggggaa ccagcggcgg aacgccgccg ccccctgcgc caccagcatc
     1261 acccggccgt cggccgcgcg gagcccctcc tgtcgcatct gccgcaccca ggccgtctca
     1321 cccctgcagt agaccatgtc gaacgccacc tgggcccgcg gggcgaggtc gagcgccagc
     1381 ggaagatgat cgccgggttt gaggcccagg ggtgtggagt tgatgagcac atcgcagtcg
     1441 cccccggtca cgatcacggc accctgcccg ctggcccagg tctcgaattc ccgccgtcgt
     1501 cccgtatcac gggagcggat ggcgaccttc gccttcgcgg tcacggccgc tgccaccgct
     1561 gcccgggcgc caccgccagt gccggcgatg agccaggcag tggcaggcgc ttccagctgt
     1621 tcgagggcgg tcaggatgcc gtcgacgtcg gtgttgtcgc catgcacctc ggcgccgttg
     1681 ccccaatagg tgttgcaggc gcccaaagcc gatacccttg gcgtgggatg ggtgactgcg
     1741 gcggcggcga gttccttgtg cggcacggtg acattgccgc cgccaccagc gcgcgcgagg
     1801 acagagagga gcgcgggaac gtcagcggcc gcggcccgga gggccacgta gacggcatcc
     1861 aggccgaggg cccggaaggc cgcgttgtgc atcgcggggg agagggaatg cgcgacggga
     1921 tcgccaagga tggcgaagac ccgggtctta ccgccgatca cccagccgct cgcgttcgag
     1981 gcgttcgacc acgccgccca gcatggcgtc gagctcgatg aaggtctcgc ggtacccctc
     2041 gaggtcgcca ccgaacgggt cgcgtacctc ggcctcggcg ccggtgcggc cggcatactc
     2101 gccgagcagg tgggcctgga tgccggtacc gagttgctcc acccgggccc ggtggtggcg
     2161 cgccatggtg aggaccacat cggccgaccc gaccagttcc cgggtcagca gccgggcgcg
     2221 gtgggccgag agatcgagcc catgctccag cgccacgagg tatgcccctt cgctggccgg
     2281 ggcgccatcc caggcgccgg tccctgcgga ggaaacctcc acgccatcca cactccgctc
     2341 ggcgagcttc ttcctgagca gagcctccgc cagcgggctc cgacaggtgt tgccggtgca
     2401 gacgagcagg atatgggtca tggtctttgg ttcgggctca ccggtcactc ctcgctcctg
     2461 ctccgcacca ccagctccgc cagccgaaag tcctcgtcgg tggtgacctt gaagttaagc
     2521 gaagagccgg gaaccagccg aacggtggct cctaaccgtt cgagcagcat ggcgtcgtcc
     2581 gtgccgcgaa ccccctcacc ccgggcccgg gcatacgcct cctcgaggag cggccgggag
     2641 aagccctgcg gggtctgagc ccgccagagc cgctcccgcg gcacggtgcc gcgaatcctg
     2701 agggcgggat cgtcgggagc cgcctccttc agggtgtcgc cgaggggaat ggcgggcaca
     2761 gcccccgccc cgctccgtgc caccgcgacg acccggtcga tcgtcgggcg atcgaccagg
     2821 ggacgggcgg cgtcatgcac cagcacgatg gcgcagtggc cggggagcgc cgagaggccg
     2881 tgggaaaccg agtcgctccg ctcggcgccg ccggcgacca ggctcagcga cccgccgatg
     2941 agtccggcga gccatggagg cggggccgcc acatcgcccg gagggaggac gacgaccaca
     3001 tgctcgacat cgggatgggc ggtgaacggc cggagggaac ggagcagcat cgggatgccg
     3061 gcaagatcgc gatactgctt gggcgttccc ccgcccatgc gggagccctg ccccgcggcg
     3121 acgatgacta cgccgatgtc acgcggcaag cgcctgcacc agcccttcga cgtgatcgag
     3181 gccgatgagg gtgaggccgc tgacgttggt cccggtccgg cccgagacga agacccgccg
     3241 gaacccgagg cgggccgcct cgaccaggcg gcgctcgaga ccaccgatgg ggcggacctc
     3301 cccacccaga ccgagttcgc ccaggaagag ggcgtccggc ggcgccgggc ggttgagcac
     3361 cgaagagagc agcgccgccg ccactgcgag atcggagcca ggctccgtga gccggacccc
     3421 ggccgtcacc tggacgaaga catcgaggtc cgcgaacgag gtaccaccgc ggcgctcgag
     3481 caccgcgagg agtactgcga ggcgcttgtg atcgaggccc gtggccaccc gctgcggggt
     3541 gccgaacccg ctccgggccg ccagcgcctg cacttccacc agcatgggcc tggtgccttc
     3601 catgagggcg gtgaccgcgc tgccggcgct gccggtggcg cgcgcggcca ggaagagggc
     3661 cgacgggttg gcgacgggct cgaggccatg accggtcatg gagaagacgc cgatctcgtc
     3721 gaccgagccg aagcggttct tggtggcccg gaggagccga tgatcgaggg tcgcctcgcc
     3781 ctcgaagtag aggacggtgt cgacgatgtg ttccagggtc ttggggccgg cgatgccacc
     3841 gcccttggtg acgtggccga ccaccatgac cgcggccccg gtttccttgg caaagcgcat
     3901 cagccgggcg gcgcattcgc gcacctggcc aacgttgccg ggcgcacttt ccagggcgtc
     3961 ggtatagacc gtctggatcg agtcgaggat gaggaggtcg gcgccgagcg tctgggctga
     4021 atcgagaatg gcttcgaggc gggtctcacc gagcacgtgc accggaccgg catcctcttc
     4081 cagccgggaa gcgcggagcc ggatctgctc cggggactcc tcgccgctgg cgtatagcac
     4141 cttgcgaccg ctggcctcga gccgggcggc tgcctgaagg agaagggtgg acttgccgat
     4201 gcccggctcg ccgccaacca gcgtcatgct gccggggaca atgccggagc ccagaacgaa
     4261 gtcgagctcc gggagcccag tggaccagcg caccaggcgg ctctcggcga tatcacgcag
     4321 ccgggcgggt ggcgcgcccc caggtgtaat tcccgctcca cgtacccggc cgctggcgcc
     4381 cccgccccgc gccaccgcga tgggttcttc ggcgacggtg ttccaggcgc cgcacgcttc
     4441 acacttgccg acccatttgg gatggtcatg gccgcaatcg gtgcagcgat agaccgaccg
     4501 cggcttagcc atactcgggc tcctcccgct cgctcagact cgagaaacgg gtgaactgct
     4561 tgtggaagta gagatcgacc gtgccggtcg ggccgttacg gtgcttcgct acgatcagct
     4621 cggccttgcc ttcgttgctg ttgccgtcct tgtcgatctg ctcgtacatc tcgggccggt
     4681 ggatgaagag cacgatgtcg gcatcctgct cgatggcgcc ggagtcgcgc aggtcggaga
     4741 ggatgggttt tcgttcgcca ccccgctgct cggaagcgcg ggagagctgc gacagggcga
     4801 tcaccggcac ttccagctcg cgggccagcg ccttgagcga acgggagatg tcggaaatct
     4861 cctgcacccg gttctcggca taggcggggc tccgcatcag ctggaggtag tccaccacga
     4921 tgacccccag gtcgttctcc atcttgaggc gccgggcctt ggagcgcatc tcgaggagcg
     4981 tgagcgccgg cgtgtcgtcg atccagaccg ggcagctcga cagcacaccc gccgcgcgcg
     5041 cgagcatggt gaagtcggtg tcggacaggg tgccccgccg cacccgctga ctgtccaccc
     5101 gcgcctcggc gcagagc
//
LOCUS       DATIFF010000854         5402 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1491791, whole genome shotgun sequence.
ACCESSION   DATIFF010000854 DATIFF010000000
VERSION     DATIFF010000854.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5402
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1491791"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2282)
                     /gene="mgtA"
                     /locus_tag="VLD58_12525"
     CDS             complement(<1..2282)
                     /gene="mgtA"
                     /locus_tag="VLD58_12525"
                     /EC_number="7.2.2.14"
                     /inference="COORDINATES: protein motif:HMM:TIGR01524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015444 - P-type magnesium transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium-translocating P-type ATPase"
                     /protein_id="HSB55180.1"
                     /translation="MRRLDCDRSGLSSERAARRLVLAGPNEVREQRPLTRFRVLLRQL
                     RSPLLLLLVVAAGVALLSREWLDAAIVLVIVAATVGVGYSREYSAQSAAAALRARLST
                     RARVVRDGEPRPVPITEVVPGDIVLLSAGSLVPGDGIILEAKDFFLSEAVLTGESFPV
                     EKGPGSSTASAPLAERDNCIFLGTNVRSGTACCLVVRTGAATEFGTIAGRLAARRPDT
                     EFDRGTRRFGYLLTVAMLVLVLIVFVAHVMRGRPPAETLLFALALAVGLSPELLPAIL
                     SVNLAHGARSMADRGVLVRRLEAIENLGSMDVLCTDKTGTLTEGVVQLGGAYDAEGRP
                     SSRVLEYAALNAALETGLANPLDDAILTAHHPDLTSVRKLGEVPFDFVRRRVSVVLAA
                     PEGAILIAKGAVSEMLDGCSHTGDGALLDPEGMARVRRQVDAWYEQGVRVLGVASRVM
                     PAQEAYGRDDERGMTLTGLVTFLDQPKEGAGEALAQLRRLGVAVKLITGDNQRVGQYV
                     ARLVGMPVDQVITGAELDRLNDEALWHAAERTQLFAEVDPNQKERIIRALRTTGHVVG
                     FMGDGVNDAPAMFAADTSLSVDQAVDVAREAADFVLLERDLDVIRRGIEEGRRTFANT
                     LKYVQTTTSANLGNMISMAFASLFLPFLPLLPGQVLLNNFLSDIPAIGLAGDNVDLEM
                     VDRPRRWDIRMIGRFMVQFGLLSAAFDFLTFGLLLRVFHALATEFRTAWFIESLLTEL
                     VIALVVRTRRPFYRSRPGRVL"
     gene            complement(2366..3544)
                     /locus_tag="VLD58_12530"
     CDS             complement(2366..3544)
                     /locus_tag="VLD58_12530"
                     /inference="COORDINATES: protein motif:HMM:NF037526.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host attachment protein"
                     /protein_id="HSB55181.1"
                     /translation="MTATHLSSPAEVVTQSVFNLLPTIEADRPIVLSLYLRLEANDRI
                     RNGFRVAVKDAIRQFEASGDYGVRPHDEREALNRDLKRITAHLDVIAGLPHTPGLALF
                     ACERLGLFEVIPLPRVFQTRLLCGTRPRLAEALSVLQGFHRILVAAVDRTHTRFFEVT
                     AFGAGEVACLTMPATRGGKFHSDRADAPGFGEHDFHNRMREERHRRAAAVADQLARLA
                     AEAPCQGVVLAGPLRTTSEMTRFLPRKLATMLLGIVPLNPTAITAAEIREAALTLRAE
                     HLKSEEAKLVGEVKDGMGTGWAVNGLGQTLHALNVGQARTLVIPLGQSVGGYRCSVSG
                     RLAVAPADCAGEGDPVPVPDLISEALEEALAQRVEVAILEDPRLATQIDGMAALLRFR
                     "
     gene            3755..4345
                     /locus_tag="VLD58_12535"
     CDS             3755..4345
                     /locus_tag="VLD58_12535"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HSB55182.1"
                     /translation="MTTLLHEAGAIGTIYHRRAVRDYLPDPIPEATVRTLLEAAVQAP
                     TAMHLEPWTFVVVQDKSRLARYSERAKALLKEEIHHSTHNPVAALAARLADPDFNIFY
                     NAGTLILICGKPMGQFVTADCWLAAENLMLAACALGLGSCCIGLAIPALDTREVREEL
                     GIPAGVSVVAPIIVGIPAEEPPVVPRKPPEILAWMR"
     gene            complement(4358..4621)
                     /locus_tag="VLD58_12540"
     CDS             complement(4358..4621)
                     /locus_tag="VLD58_12540"
                     /inference="COORDINATES: protein motif:HMM:NF012759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantetheine-binding protein"
                     /protein_id="HSB55183.1"
                     /translation="MTRDEIRQGVLNALLSVVPEAKPAEIDPATSLRDQLDIDSMDFI
                     NFIATLDQTLGVDVPESEYGRMATLESSVDYLASRLGVPVSSG"
     gene            complement(4618..>5402)
                     /locus_tag="VLD58_12545"
     CDS             complement(4618..>5402)
                     /locus_tag="VLD58_12545"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HSB55184.1"
                     /translation="AAEKGVDLATIHGSGEGGTILREDVEAAANAVAGAGVEDRSARM
                     RRAIAAAMTRSKREIPHFYLLSTIDFGPASAWLTRFNGERKPAERLLPAVLLLKATAL
                     ALSEFPELNARWQNDRVEPAEAVHIGVATSLRGGGLVLPALHHVNRLALPELMVELRG
                     LVQRARSGTLRSSDLTDGTITVTSLGERSADLVLGVIYPPQTAIVGFGAVVERPWVVG
                     GSVTPRPVVTASLAADHRASDGHRGGAFLAAIDRLLQTPEGL"
BASE COUNT          888 a         1898 c         1816 g          800 t
ORIGIN      
        1 agcacccgcc ccggccggct ccggtagaac ggccgccgag tgcggaccac cagcgcgatc
       61 accagctcgg tcagcagcga ttcgatgaac caggcggtgc gaaactccgt ggccaacgcg
      121 tgaaagaccc ggagcaggag cccgaaggtc aggaaatcga acgcggcgct caggagcccg
      181 aactgcacca tgaagcggcc gatcatgcgg atatcccagc gacggggacg atccaccatc
      241 tcgaggtcga cgttgtcgcc ggccagcccg atggccggga tatcggagag gaagttgttg
      301 agcaggacct gccccggcag cagcggaagg aacgggagga acagcgaggc aaacgccatg
      361 ctgatcatgt tgccgagatt ggcgctggtc gtggtctgga cgtacttgag tgtgttggca
      421 aaggtgcggc ggccctcctc gatgccccgg cggatcacat cgagatcacg ctccagcagc
      481 acgaagtcgg cagcctcccg ggccacgtcc accgcctggt ccaccgagag gctcgtgtcc
      541 gcggcgaaca tcgcgggggc atcgttcacc ccgtcgccca tgaacccgac cacgtggccg
      601 gtcgttcgca gggcccggat gatccgttcc ttctggttgg gatccacctc ggcaaagagc
      661 tgggtccgct cggccgcatg ccacagcgcc tcgtcgttga gccggtcgag ctccgccccg
      721 gtgatcacct ggtccaccgg catccctacc agtcgggcaa cgtactggcc cacccgctgg
      781 ttgtcgcccg tgatcagttt gaccgccaca cccaggcgcc ggagctgcgc cagtgcttca
      841 cccgccccct ccttgggctg gtcgaggaag gtcacgagac cggtgagggt catgcctcgc
      901 tcgtcatcgc gcccgtacgc ctcctgcgcg ggcatcactc gcgaagccac gccgaggacc
      961 cggaccccct gctcgtacca ggcatccacc tggcgccgca cccgggccat cccttccggg
     1021 tcgagcagcg cgccatcacc ggtatggctg cacccgtcga gcatctcgga gacggccccc
     1081 ttggcaatca ggatcgctcc ctcgggagcc gcgagcacga cactcacccg gcgccgcacg
     1141 aagtcgaacg gcacctcgcc cagctttcgg accgaggtca gatcggggtg gtgcgccgtc
     1201 aggatcgcat cgtcgagcgg attggcaagc ccggtctcga gcgcggcatt gagggcggcg
     1261 tactcgagca ccctggagga cggccgccct tccgcgtcgt aggcgccccc cagctggacc
     1321 accccctcgg tgagggtgcc ggtcttgtcg gtgcagagca cgtccatgct gccgaggttc
     1381 tcgatggcct cgagccgccg gaccagcacg ccgcgatcgg ccatggagcg ggcgccgtgg
     1441 gccaggttga cgctgaggat cgccggcagg agctcgggac tcagcccgac ggccagcgcc
     1501 agcgcgaaca gcagggtttc ggctggcggc cgcccgcgca tcacgtgcgc cacgaagacg
     1561 atgaggacca gcaccagcat ggcgacggtg aggagatagc cgaaacggcg tgtgccccgg
     1621 tcgaactcgg tgtccggacg ccgcgccgcc agccgcccgg cgatggtccc gaattcggtg
     1681 gcggcgccgg tgcggaccac caggcagcag gcggtcccgc tccggacgtt ggtgccgagg
     1741 aagatgcagt tgtcccgctc ggccagcggc gcggaagccg tcgagctgcc ggggcccttt
     1801 tctaccggga agctctcccc ggtcagcacc gcctcactca ggaagaaatc cttcgcttcg
     1861 aggatgatcc cgtcgcctgg caccaggctg ccggccgaga gcaggacgat gtcgcctgga
     1921 accacctcgg taatgggaac cgggcggggt tcgccgtcgc gcaccaccct ggcgcgggtg
     1981 ctgagccggg cccgcagggc cgcggccgcc gactgggcgc tgtattcccg ggagtagccg
     2041 acccctacgg tggcggccac gatgacgaga acgatcgcgg cgtcgagcca ctcgcggctg
     2101 aggagcgcga cgccggccgc caccaccagg aggagcagca ggggactcct caactggcgc
     2161 agcagcaccc gaaaccgggt aagcggccgc tgctcccgca cctcgttggg tcccgcgagc
     2221 acgagccggc gggccgcgcg ttccgacgag aggccgctcc tgtcgcagtc gagccgtcgc
     2281 atcacctcgg ccggagagag cgaccagtag tcgggtatcg agtccgtctc cgcctccttc
     2341 ggtggccgga gtgaagtgcg ggcggctaac ggaagcggag cagcgccgcc atcccgtcga
     2401 tctgggtggc gagcctggga tcttccagga tcgcaacctc gacccgctgc gccagcgcct
     2461 cctccagcgc ctcgctgatg agatccggca ccggaaccgg gtcaccctcg ccggcgcaat
     2521 cggcaggggc cacggccagc cggcccgaca cgctgcagcg gtacccgccg accgactgcc
     2581 ccaacgggat caccagggta cgagcctgcc ccacattcag cgcgtgcagc gtctgcccca
     2641 gaccattcac ggcccagccg gttcccatcc cgtctttcac ttcaccgacc agcttcgcct
     2701 cctccgactt gagatgctcg gcccggaggg tcagcgcggc ctcgcggatt tccgcggccg
     2761 tgatcgcggt gggattgagg gggacgatgc ccaggagcat cgtggccagc ttgcgaggga
     2821 ggaagcgggt catctcgctg gtggtgcgaa gcggtcccgc cagcaccaca ccctgacagg
     2881 gcgcttccgc ggccagccgg gccagctgat cggccacagc ggcggcccgg cggtggcgct
     2941 cttccctcat ccgattgtgg aagtcgtgtt cgccaaagcc gggggcatcg gcccgatcgc
     3001 tgtggaactt ccctccccgt gtggccggca tggtcaggca cgccacttcg cccgcgccaa
     3061 aggcggtgac ttcgaagaac cgggtgtggg tccggtcgac cgcggcgacg agaatccggt
     3121 gaaatccctg gagtacgctc agcgcttcgg caagccgcgg ccgggtgcca cacagcagcc
     3181 gggtctggaa cacccgggga agaggaatga cctcgaacag gcccagacgc tcacacgcga
     3241 acaacgcgag accgggcgtg tgaggcaggc cggcgatgac gtcgagatgc gccgtgatcc
     3301 gcttgaggtc gcggttcaac gcctcccgct catcgtgggg cctcacgcca tagtctcccg
     3361 acgcctcgaa ctgacggatg gcgtccttga ccgcgacccg gaacccgttg cggatccggt
     3421 cattcgcctc caggcgcagg tagagactca acacgatcgg gcggtcggcc tcgatggtcg
     3481 gcagcaggtt gaagacggac tgggtgacga cttcggcggg cgaggaaaga tgtgtggcgg
     3541 tcacagcggc ctcctactga tgacgcaagg cactggcggg ggcctggcgc tcgggccagg
     3601 cggtctacct cggctacaag atggcatgga ggggttgaac cgagactgag cagccggtga
     3661 aacccggttc atccggcggc atacggctgt catcgggggt tcacccgatc ctcagatcct
     3721 ggggggtatc gtcaatcgga aatcgggagg ccctatgacc acactgctgc atgaggccgg
     3781 cgcgatcggg accatttatc accggcgtgc cgtgcgcgac tatctgccgg accccatccc
     3841 ggaagccacc gtccgcaccc tgctcgaagc ggcggtccag gccccgaccg cgatgcacct
     3901 cgagccatgg accttcgtcg tcgtccagga caagtcccgc ctggcgcgct actccgagcg
     3961 ggccaaggcg ctcctcaaag aggagatcca ccactcgacg cacaatccgg tcgcggcgct
     4021 cgcggcgaga ctggccgacc cggacttcaa catcttctac aatgccggca ctctgatact
     4081 gatctgcggc aagccgatgg gtcagttcgt caccgcggac tgctggctcg ccgccgagaa
     4141 cctgatgctg gccgcctgtg cgctgggcct ggggagctgc tgcatcgggc tcgctattcc
     4201 cgccctggac acgcgggagg tgcgggagga actcggcatt cccgccggcg tatcggtggt
     4261 ggctccgatc attgtgggca tccccgccga agaaccccca gtggtccccc gcaagccgcc
     4321 ggagatcctg gcctggatgc gctgaggctg gctcgcctca gccggacgaa accggcacgc
     4381 cgagccgcga cgccaggtag tcgacgctgc tctcgagcgt cgccatccgg ccatactccg
     4441 attccggcac atcgacaccc agggtctggt caagggtcgc gatgaagttg atgaaatcca
     4501 tcgaatcgat gtcgagctga tcccggaggg atgttgcggg gtcgatctcc gccggtttcg
     4561 cttccggcac gaccgacagc aacgcgttca gcactccctg cctgatctcg tcccgcgtca
     4621 tagtccctcc ggtgtctgca gcaggcggtc gatggccgcg aggaaggccc cgccgcggtg
     4681 cccatcgctg gcccggtgat cagcggcgag tgaggcggtg accaccggac gcggggtcac
     4741 gctgccaccc accacccatg gccgctcgac caccgcgccg aacccgacga tcgcggtctg
     4801 cggcgggtag atcacaccga gcaccaggtc ggcgctccgc tcgcccaggc tcgtcacggt
     4861 gatggtgcca tcggtcaggt cggaactgcg gagcgttccc gagcgggccc gctggaccag
     4921 gccgcgcagc tccaccatga gttcgggcag ggccaggcga ttcacgtggt gcagcgccgg
     4981 cagcaccagc ccgccccccc ggagcgaagt cgcgaccccg atgtgcaccg cctccgctgg
     5041 ctcgacccgg tcgttctgcc agcgggcgtt gagctcgggg aactccgaca gcgccagcgc
     5101 ggtcgccttg aggagcagca ccgccgggag cagccgctcg gccggcttcc gctccccgtt
     5161 gaaccgggtg agccaggcgc tggccgggcc gaagtcgatg gtgctgagca ggtagaagtg
     5221 gggaatctcc cgcttcgagc gagtcatcgc ggcggcgatg gcccgccgca tccgggcgct
     5281 ccggtcttcc accccggcgc cagccaccgc attcgctgca gcttcgacgt cttcgcggag
     5341 gatcgttccc ccttctcccg acccgtggat agtggcgaga tcgacgccct tctccgctgc
     5401 ca
//
LOCUS       DATIFF010000855         1952 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1337555, whole genome shotgun sequence.
ACCESSION   DATIFF010000855 DATIFF010000000
VERSION     DATIFF010000855.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1952
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1337555"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..898
                     /locus_tag="VLD58_12550"
     CDS             <1..898
                     /locus_tag="VLD58_12550"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="isomerizing glutamine--fructose-6-phosphate
                     transaminase"
                     /protein_id="HSB55185.1"
                     /translation="EYMLEEMARVPVEVEYASEFRYRNPVVDPKTLVIGISQSGETAD
                     TLAAIREAKRRGARTVGVVNVVGSTIAREVDGGIYLHAGPEVGVASTKAFTSQVAALA
                     LISLRIARLRNFSILQGRQFIHALSRLPEQMADILARSVDIERLAERFLATTHNALYL
                     GRGVNFPVALEGALKLKEISYIHAEGYPAAEMKHGPIALIDENMPVVFIAPKDAVHSK
                     IVSNIEEVKARGGKVIALVNSGDAEIERLADATFTIPETLDVLTPILTSIPLQLLSYY
                     VAVRRGCNVDQPRNLAKSVTVE"
     gene            complement(989..1882)
                     /locus_tag="VLD58_12555"
     CDS             complement(989..1882)
                     /locus_tag="VLD58_12555"
                     /inference="COORDINATES: protein motif:HMM:NF024874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSB55186.1"
                     /translation="MATGPLRTRLSFARRYAGATLRDRRQSRCPIASAPFRPAPEGWP
                     DDRATFAWLGHATVLGNFYGTWVLTDPALETRIGVGRGMAKLGPRRLVAPALGPRELP
                     PIDLLLLSHAHMDHTDLGTLGRLSRDVRVIVQPGNRDLVRRFRRVDELAWGDRLGFGD
                     LEIESVEVKHWGARMITDRHRGYGGYVLRKAGRTVLFAGDTAYTTALAPLGRRGPIDL
                     AILPIGAYDPWIYNHASPEQAWRMARDMGARHVLPVHHSTFRLSREPADEPVARLLAA
                     AGPDRHRVAITRVGETWVLPE"
BASE COUNT          301 a          686 c          682 g          283 t
ORIGIN      
        1 cgaatacatg ctcgaggaga tggcccgggt cccggtagag gtcgagtacg cgtcggagtt
       61 ccgctaccgg aatccggtcg tcgacccgaa gacgctggtc atcgggatct cccagtcggg
      121 cgagacggcc gacaccctag ccgccatccg cgaagcgaag cgccgtggcg cgcggaccgt
      181 gggcgtggtg aacgtggtcg gctcgaccat cgcccgcgag gtggatggcg gcatctacct
      241 ccatgcgggc ccggaggtcg gggtcgccag caccaaggcg ttcaccagcc aggtggccgc
      301 gctggcgctg atctctctca gaatcgcgcg gctcaggaac ttcagcatcc tccagggccg
      361 gcagttcatc catgctttga gccggctccc ggagcagatg gccgacatcc tcgcccgctc
      421 ggtggacatc gagcgcctgg ccgagcggtt cctggccacc acgcacaatg ccttgtatct
      481 gggccgcggg gtgaatttcc ccgtggcgct cgagggcgcg ctcaagctga aggagatctc
      541 gtacatccac gccgagggct atcccgcggc ggagatgaag cacgggccca tcgcgctgat
      601 cgacgaaaac atgccggtag tgttcatcgc cccgaaggac gccgtccact ccaagatcgt
      661 gtccaacatc gaggaggtga aggcacgggg cgggaaggtg atcgccctgg tgaacagcgg
      721 cgacgcggag atcgagcgcc tcgccgacgc cacgttcacc atccccgaaa cgctggacgt
      781 cctgaccccg atcctgacca gcatcccgtt gcagctgctc tcgtactacg tggcggtgcg
      841 gcggggctgc aatgtggatc agccgagaaa cctggccaag tcggtgacgg tggagtagcg
      901 ggcgaaccat aacgccccca catcggcatc gatttggtct gtgcttccgc ccccgggctt
      961 cccgcccggg ggcgcgttgc ttgggaggct actccggcag gacccaggtc tccccgaccc
     1021 gggtgatggc cacgcgatgc cggtcgggac cggccgcggc caggagccgc gcgaccggct
     1081 cgtcggccgg ctcgcggctc agccggaagg tcgagtggtg caccggcagc acgtgccgcg
     1141 cgcccatgtc ccgggccatg cgccaggcct gctcgggcga ggcgtggttg tagatccacg
     1201 ggtcgtacgc gccgatcggc aggatcgcga ggtcgatcgg gccccggcgg ccgagcggcg
     1261 cgagcgccgt ggtgtaggcg gtgtcgccgg cgaacaggac cgtccgcccc gccttgcgga
     1321 ggacgtagcc gccatacccc cggtgccggt ccgtgatcat ccgcgccccc cagtgcttga
     1381 cctcgaccga ctcgatctcg agatccccga acccgagccg gtcgccccag gccagctcgt
     1441 caacccgccg gaaccgccgc accaggtcgc ggttccccgg ctggacgatc actcgcacgt
     1501 cgcgcgaaag ccgcccgagc gtgcccaggt cggtgtgatc catgtgcgcg tgggagagga
     1561 gcagcagatc gatgggcggg agctcccggg gtcccagggc cggcgccacc agccgccgtg
     1621 ggccgagctt ggccatgccc cgccccacgc cgatccgggt ctcgagcgcc gggtccgtca
     1681 ggacccaagt gccatagaag ttgcccagca ccgtggcgtg acccagccag gcgaaggtgg
     1741 cccggtcgtc cggccatccc tccggcgccg ggcggaacgg cgccgacgcg atggggcagc
     1801 ggctctggcg tcggtcgcgc agcgtggcgc ccgcgtagcg gcgcgcgaag gagagtctcg
     1861 tcctcaaggg tcccgttgcc atcgtcctcc cgtcgtgcgg agcggagtta acttaaaccg
     1921 ccttcgaccc ggccccggtt ccccgcgggc cg
//
LOCUS       DATIFF010000856         4957 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_261610, whole genome shotgun sequence.
ACCESSION   DATIFF010000856 DATIFF010000000
VERSION     DATIFF010000856.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4957
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261610"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1999)
                     /gene="leuS"
                     /locus_tag="VLD58_12560"
     CDS             complement(<1..1999)
                     /gene="leuS"
                     /locus_tag="VLD58_12560"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HSB55187.1"
                     /translation="MSDTPSDAYRPDQVEAKWRTRWAERGTNQPNLDTPKRPFYNLMM
                     FPYPSAEGLHVGNMFAFTGADVYGRYKRLTGFDVFTPMGYDAFGIHSENYALRIGTHP
                     GVLIPQNIRNFRRQLEGMGGMFDWSHSLSTTDPAYYKWTQWLFLQLFKAGKAYKKKAA
                     VNWCPVDKTVLANEQVENGRCERCGALVEQRFLEQWFFRITEYADRLLNNLAKLDWSD
                     TTLTAQRNWLGRSEGAEIDFEVSGKRGERIKVFTTRPDTLFGATFMVLAPEHPLVAKL
                     TTPERKAEVDAYVKAAAAQDLVSRKTGSRDKAGVFIGATAVNPATGKPIPVWIADYVL
                     MEYGTGAIMAVPAHDERDFEFASRFGLEIVRVLGPAGSVGVALPAPSAAEVETEGFVL
                     VNSSHFDGRPAEAAKRSVTEWLATKGLGKAVVQYRLHDWCISRQRYWGPPIPIIYCEG
                     CGPVAVPEKDLPVILPDIPDFRPDDSGISPLARHEEWYYVPCPKCGKRARRETDVSDT
                     FLDSAWYFLRYPSTEFDDRPFDQKRTETWCPVTSYIGGNEHAVLHLLYSRFLTMVLHD
                     LGHLKFEEPFARFRAHGLIVKDGSKMSKSRGNVVIPDEYIAQWGADTFRLYLMFLGPF
                     QEGGDFRDAGISGPRRFLDRVWGLVGEASGESGDELSKDIVV"
     gene            2142..3434
                     /locus_tag="VLD58_12565"
     CDS             2142..3434
                     /locus_tag="VLD58_12565"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098561 - methyl accepting chemotaxis
                     protein complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HSB55188.1"
                     /translation="MADQRRKFVRSIYLASAGLLTLLGGLEVVVFWLFGSDGFAPGRF
                     WIAAAAALGGYLILAALIIIFTVSWLRRNILRPLGNTIVVASRVAEGDLTVSLSSAGA
                     GDANSMTQAVGLMVSQLRTLVAAIRTSAQEAAAMAQEISSSTQEMSASTEEVSGTCND
                     LTDRATKQAAVVRAAAQDGDRILQIAQTLAVSAGEAADRNAALARLARDHRDELDASS
                     SELQRLAEEIEKGAEEAAALAAASEEIEKFVTQTKAIARQTHMLALNAGIEAARAGEE
                     GKGFAVVAEEVRKLAGQAAQAATQTSETVQLVQERVATARDRLLRLARGGQAARATAH
                     KAAEGLARVADEAHQTDEWGRQISKSSGEVRSLIEGIALRMAEVSSGTEDVAAAAQEI
                     AASAEELSASTEQVAGSAHALSETAQGLFGRVGTFKVE"
     gene            complement(3571..4530)
                     /locus_tag="VLD58_12570"
     CDS             complement(3571..4530)
                     /locus_tag="VLD58_12570"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HSB55189.1"
                     /translation="MEEFAGLRHLFQTQEPVSIVPAPAALLREIGLRATIDHRVLVPV
                     TGEESAALADTAESLGAEVVRLMVHPGDSVEPELLERWLREPAIDSLALVHSEPSTGV
                     LAPLEAIAGVMQRHPDLVLFVDAVDSLGATPIRTDLWGLDFVLAASDGPLGLPPGLAF
                     ATASPRLLARTHGLQGRGVMLDYRTHHTAAAEGTLVAELPPMLGPHLVRRLRELEGDG
                     LEALWNRYAHAAAMLAEWVNGRKDLSLVAREGRRSPTVSCFRLEDSRPATGVADRLGA
                     LGWTVGITLMEGWVGLQVEHVGEAAIERMPALLTAMEEALRPG"
     gene            complement(4539..>4957)
                     /locus_tag="VLD58_12575"
     CDS             complement(4539..>4957)
                     /locus_tag="VLD58_12575"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HSB55190.1"
                     /translation="FVRRHLGDPDTGSRLPEYDRFSAYLNFDNGSGRIRGIYLQGNTG
                     ARPIFESLLAPWADLGANHVTIAATGSTDHISFVAVGLPGFQFIQDPLDYDSRVHHSH
                     LDTADYLVEEDLKQSAAVMASVVYHLAMRDSLVPRH"
BASE COUNT          826 a         1654 c         1711 g          766 t
ORIGIN      
        1 gcaccacgat gtccttgctg agctcatcgc cgctctcgcc cgaggcctcg cccaccaacc
       61 cccagacccg gtccaggaac cgccgaggac cgctgatacc ggcatcgcgg aagtcgcccc
      121 cttcctggaa cgggcccagg aacatcaggt acagccggaa ggtatcggcg ccccactgcg
      181 cgatatactc gtcgggaatg acgacgttgc cgcgcgactt cgacatcttc gagccgtcct
      241 tgacgatcag cccgtgggcc cggaaccgcg cgaagggctc ctcgaacttg agatgcccca
      301 gatcgtgcag caccatcgtc aggaagcggg aatagagcag gtgaagcacc gcatgctcgt
      361 tgccgccgat gtagctggtg accgggcacc aggtctcggt ccgcttctgg tcgaagggcc
      421 ggtcgtcgaa ctcggtgctg ggatagcgca ggaagtacca ggcgctgtcc aggaaggtat
      481 ccgagacgtc ggtctcacgc ctggcccgct tcccgcactt cgggcagggg acgtagtacc
      541 actcctcgtg ccgtgccagc ggcgagatgc cgctgtcgtc gggacggaaa tcgggaatgt
      601 cgggcaggat gaccggcagg tccttctccg gcaccgccac cggaccgcag ccctcgcagt
      661 agatgatcgg aatcggcggg ccccagtagc gctggcgcga gatgcaccag tcgtggagcc
      721 ggtactgaac gacggccttg cccaatccct tcgtcgccag ccactcggtg accgagcgct
      781 tggccgcctc cgccgggcgg ccatcgaagt ggctcgagtt caccagcacg aagccttcgg
      841 tctcgacctc ggcggcgctg ggcgcaggca gcgcaacccc gaccgaaccg gccggcccga
      901 gcacccgcac aatttccagt ccgaacctgg aggcaaactc gaagtcgcgc tcgtcatggg
      961 ccggtaccgc catgatggcg ccggtgccgt actccatcag cacatagtcg gcgatccaca
     1021 ctggaatcgg cttgccggta gccggattga ccgccgtggc tccgatgaac acaccggcct
     1081 tgtcccgcga accggtcttc cgcgagacca ggtcctgcgc cgccgccgcc ttcacgtagg
     1141 catcgacctc agccttccgt tcgggcgtcg tgagcttcgc caccagggga tgctccggcg
     1201 ccagcaccat gaacgtggcg ccgaacagcg tgtcggggcg ggtggtgaag accttgattc
     1261 gctcgccacg cttcccgctc acctcgaagt cgatctcggc gccctcgctc cgccccagcc
     1321 agttgcgctg ggccgtcaac gtggtgtcag accagtcgag cttcgccagg ttgttgagca
     1381 gccggtcggc gtactcggtg atccggaaga accactgctc caggaagcgc tgctccacaa
     1441 gggccccgca gcgctcgcat cggccgttct cgacctgctc gttggccagc accgtcttgt
     1501 cgaccgggca ccagttgacc gcagccttct tcttgtaggc cttccccgcc ttgaagagct
     1561 ggaggaaaag ccactgggtc cacttgtagt aggccggatc ggtggtgctg agcgaatggc
     1621 tccagtcgaa catcccgccc atgccctcga gctggcggcg gaagttgcgg atgttctgcg
     1681 gaatcagcac cccggggtgg gtgccgatcc tgagggcgta gttctcgctg tggatgccga
     1741 aggcgtcgta gcccatcggg gtgaagacgt cgaacccggt gagccgcttg tagcggccat
     1801 agacgtcggc cccggtgaac gcgaacatgt tccccacatg cagcccttcg gccgaggggt
     1861 aggggaacat catcaggttg tagaaggggc gcttcggggt gtcgagattg ggctggttgg
     1921 tgccccgctc ggcccagcgg gtacgccact tggcctcgac ctggtcgggg cggtaggcgt
     1981 cagagggtgt atcgctcata ggggcaggaa tttagactcg gacgggaggt ggcgacagga
     2041 tcggcgattc cggggccgtt ctggcccgac ctgcccgctt gccccagccc gccccgagga
     2101 cctaacttcc agcctccatt tcacttaccc aaacgagacc gatggctgac cagcgacgga
     2161 agttcgtccg cagcatctac ctcgcgtcag ccgggctgct gaccctgctc gggggcctcg
     2221 aggtcgtggt cttctggctg ttcggctccg acggatttgc gccgggccgc ttctggattg
     2281 ccgccgccgc cgccctgggc ggctacctca ttctcgccgc gctgatcatc attttcaccg
     2341 tcagctggct ccgccggaac atcctccgtc ctctgggcaa caccatcgtg gtggcgagcc
     2401 gggtggccga gggcgacctg accgtgtcgc tctcctccgc cggtgcgggg gacgccaaca
     2461 gcatgaccca ggcggtcggg ctgatggtga gccagctgcg gacactggtc gccgcgatcc
     2521 ggaccagcgc ccaggaagcg gccgcgatgg cgcaggagat ctcgagctcc acccaggaga
     2581 tgagcgcctc gaccgaggag gtctccggga cctgcaacga cctgacggac cgtgccacca
     2641 aacaggcggc ggtggtgcgt gccgcggcgc aggatggcga ccggatcctc cagatcgccc
     2701 agaccctcgc ggtgagcgcg ggagaggcgg ccgaccgtaa cgccgccctg gcccgcctgg
     2761 cgcgggatca ccgcgacgag ctggacgcga gttcgagcga gttgcagcgg ctggcggagg
     2821 agatcgagaa gggcgcggag gaggcggccg ccctggccgc ggcgtccgaa gaaatcgaga
     2881 agttcgtcac ccagaccaag gcgatcgcgc ggcagaccca catgctggcg ctcaatgccg
     2941 gtatcgaggc ggcccgcgcc ggcgaggagg gcaaagggtt cgccgtggtc gccgaagagg
     3001 tccgcaaact ggcgggccag gcggcccagg ccgcaaccca gaccagcgag acggtccagc
     3061 tggtgcagga acgggtggcg acggcccggg accgactgct ccgcctggcg cggggcggcc
     3121 aggcggcgcg cgcaacggcc cacaaggcgg ccgaggggct cgcgcgggtg gcagacgagg
     3181 cgcaccagac cgacgagtgg gggcggcaga tctccaagtc gtcgggcgag gtgcggagcc
     3241 tgatcgaagg aatcgcgctg cggatggccg aggtgtcgag cgggacggag gatgtcgcgg
     3301 cggcggcgca ggagatcgcg gcgagcgcgg aggagctttc ggcctcgacg gagcaggtgg
     3361 cgggttcggc gcatgcgctg tcggagacgg cgcaggggtt gtttggccgg gtcgggacgt
     3421 tcaaggtcga gtaggaagac gggctgcgtt ttcccgccgc tgcccgcgtc ttgcaggtcc
     3481 cacagatcgc ccgccctccg ctgatattcc ccctatgggg ggcggagccc tcagggcatc
     3541 gattcgcttc ccggccggcc cggtctcctc ctaacccggt cgcagcgcct cctccatcgc
     3601 cgtcagcagc gcgggcattc gttcgatggc ggcctccccg acatgctcca cctgcaggcc
     3661 cacccagccc tccatcagcg taatcccgac ggtccatccg agtgcgccca ggcgatccgc
     3721 gacccccgtt gccgggcgtg aatcctccag ccggaagcag ctcaccgtgg gagaccgccg
     3781 cccctctctc gccaccagcg acaggtcctt tcgcccattc acccactccg cgagcatcgc
     3841 agccgcgtgg gcatagcggt tccacagcgc ctcgagcccg tcgccttcca gctccctgag
     3901 tcgccgcacg aggtggggtc cgagcatcgg cggcagctcc gccaccagtg tgccttcggc
     3961 cgccgcagtg tgatgagtcc ggtaatccag catcacgccc cgtccctgca atccgtgggt
     4021 cctcgcgagg agacgaggcg atgcggtggc gaaggcgaga ccgggaggga gcccgagagg
     4081 gccatcagag gctgcgagga cgaagtcgag gccccagaga tcggtgcgaa tgggggtggc
     4141 gccgagtgag tcgacggcat cgacaaacaa caccaggtcg gggtgacgct gcatcacacc
     4201 ggcaatcgcc tcgagcgggg ccagtacgcc ggtactcggc tccgagtgca ccagcgccag
     4261 gctgtcgatg gccggctcgc gaagccagcg ctcgagcagc tcgggctcga cactatctcc
     4321 ggggtgcacc atgaggcgca cgacttcggc gccgagtgac tcggcggtgt ccgcgagcgc
     4381 agcgctttcc tcgccggtga cggggacgag cacccggtga tcgatggtgg cgcggagacc
     4441 aatttcccgg agcagcgcgg ccggggcagg cacgatcgat accggctcct gggtctggaa
     4501 caggtgtctg agtccggcga attcctccac cgctcgcctc agtgccgggg aacgaggctg
     4561 tcgcgcatgg ccaggtgata caccaccgat gccatgacgg ccgcgctctg cttgagatcc
     4621 tcctcgacca ggtagtcggc ggtgtcgagg tgactgtgat gcacccgcga gtcgtagtcg
     4681 agcggatcct ggatgaactg gaagccaggc aggcccacgg ccacgaacga gatgtggtcg
     4741 gtcgagccgg tggcggcgat ggtcacatga ttggcgccca gatcggccca gggcgcgagc
     4801 aacgactcga agatcgggcg cgcgccggtg tttccctgga gatagatccc gcggatccgg
     4861 ccggagccgt tgtcgaagtt gagataagcg gagaaccgat catactcggg gagacgggac
     4921 ccggtgtcgg gatcgccgag atggcgccgg acgaagc
//
LOCUS       DATIFF010000857         1987 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2107060, whole genome shotgun sequence.
ACCESSION   DATIFF010000857 DATIFF010000000
VERSION     DATIFF010000857.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1987
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2107060"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            170..1258
                     /locus_tag="VLD58_12580"
     CDS             170..1258
                     /locus_tag="VLD58_12580"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HSB55191.1"
                     /translation="MTDVTPVADAGPAPERRVGIRSPVLTCLVVLAGLYTLYFARPFL
                     LPLTVAVLLDLLLSPVVRGLKRARVPSPVGAALVILGLLGALGLAGYGLAEPAQSWLA
                     RGPSSLREAQHKLHSLKAPLEWISRTAEQVEQAAAVPDDPQRPEVVLKGPSVTSQMFG
                     TTRSLIAGALQVIILAYFLLAADDLFLEKLVKGLPQFGDKRKAVAIARQTETAISSYL
                     FTAALVNLGAGLSVAAAMTLIGMPNALLWGGLTALAEFVPYLGALGMVITLSLAALVT
                     FDSLGHALLVPAAYLAINFLQVNVVSPKVFGHRLALNPVAILVGLAFWWRIWGLPGAL
                     VAVPVIATLKICCDHIERFRPVGEFLGR"
     gene            complement(1290..1505)
                     /locus_tag="VLD58_12585"
     CDS             complement(1290..1505)
                     /locus_tag="VLD58_12585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55192.1"
                     /translation="MRPLTIAGIILIAFGVFVLLRGASFTSRRDVLKVGDVKVTADEQ
                     RALPPWTGWLAVVAGGALAVAGARRRS"
     gene            complement(1719..>1987)
                     /locus_tag="VLD58_12590"
     CDS             complement(1719..>1987)
                     /locus_tag="VLD58_12590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55193.1"
                     /translation="GPFISAGALASAFGVTGGAAAAGAIVGGASGAVAGALSRAGFTE
                     EEADYYGGALEQGGILVTVDTNGRVETDAVATILSQYGGHAYVR"
BASE COUNT          287 a          706 c          669 g          325 t
ORIGIN      
        1 ctaccacgcc gtggcgggga gaaggaccca acggatctga cgcgccctct ccgcagtcgg
       61 ccgaagctgc ttcgggtccc ggcgccggat taccggcgcc gggactcggg cgctcggtcg
      121 ggtgatggga agccacctga ccgcggagtg atgatatgac gagcgtcgta tgacggacgt
      181 gacgccggtt gccgacgccg ggccggcgcc ggagcgacgg gtcggcatcc gctccccggt
      241 gctcacctgt ctcgtggtgc tcgccggcct ctacacgctc tactttgccc gcccctttct
      301 ccttcccctc acggtcgccg tactgctcga tctcctgctc agccccgtgg tccgcgggct
      361 caagcgcgca cgggtgccct ccccggtcgg cgcggccctg gtgatcctgg gcctcctcgg
      421 cgcacttggc cttgccggct atgggctcgc ggagccggcc cagagctggt tggcaagggg
      481 gcccagcagt ctgcgcgagg cccagcacaa gctgcactcg ttgaaggcgc cgctggaatg
      541 gatcagccgc acggcggaac aggttgagca ggcggcggca gtccccgacg accctcaaag
      601 gcccgaagtc gtcctgaagg gacccagcgt cacgtcccag atgttcggca cgacgcggag
      661 cctgatcgcg ggtgcgctcc aggtcatcat cctggcctat ttcctactcg ccgccgacga
      721 tctgttccta gaaaagctgg tcaaagggct tccgcagttc ggcgacaagc gaaaggctgt
      781 cgcgatcgcg cggcagaccg agactgccat ctccagctac ctcttcacgg cggcgctggt
      841 gaacctcgga gcgggcctgt cggtggcggc ggcgatgacg ctcatcggca tgcccaacgc
      901 actgctctgg ggcggcctca cggccctggc cgaatttgtg ccctacctcg gcgccctcgg
      961 gatggtgatt acgctctcgt tggccgcgct cgtgaccttt gactccctag gtcacgcgct
     1021 cctcgtgccc gcagcgtacc tcgccatcaa cttcctccag gtcaacgtgg tgagtccgaa
     1081 agtgttcgga catcgcctgg cgctgaaccc ggtcgccatt ctggtcgggc tggccttctg
     1141 gtggcggatt tggggccttc cgggcgcgct cgtcgccgtg ccggtgatcg ccacgctcaa
     1201 gatctgctgc gaccatatcg agcggttccg gcccgtcgga gagttcctgg gtcggtagcg
     1261 tcggcacccg cgggctcgcc agtcgggcgt cagctccgcc gccgcgcccc ggccacggcc
     1321 agggcgccgc cggccaccac ggcaagccat ccggtccaag gcgggagcgc tcgctgctcg
     1381 tccgcggtga ctttgacgtc gccgaccttg agcacgtcac gccgggatgt aaagctcgcc
     1441 ccccgaagga ggacgaacac accaaaggcg atcagaatga ttccggcaat ggtgagtgga
     1501 cgcatgagcg ctccgaatcg gacggggtaa ggtgggggcc ggcgccgggt gtgcccgcgg
     1561 gtcgacaccc gcgggggcgg catcaggatc tgcggccagc tgccggtgcg accggcggtc
     1621 gccggggttc tcacgtggac aggaccgtga ggagcccggc gcccaccggt gcacgggcgc
     1681 tcaccacctc catggtcact gggcgccctg gccgtggctc agcggacata ggcatgcccg
     1741 ccgtactgcg agaggatggt ggccaccgcg tctgtctcta ctcggccgtt ggtgtcgacc
     1801 gtcaccagga tgccaccctg ctcgagggcc ccaccgtagt agtccgcctc ctcctccgtg
     1861 aacccggccc gggacagcgc acccgctact gcacccgagg ccccacccac gattgcccca
     1921 gctgcagcgg cgccgccggt cacgccgaat gccgaggcga gggcgcctgc gctgatgaag
     1981 ggcccaa
//
LOCUS       DATIFF010000858         1347 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1491874, whole genome shotgun sequence.
ACCESSION   DATIFF010000858 DATIFF010000000
VERSION     DATIFF010000858.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1491874"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..723)
                     /locus_tag="VLD58_12595"
     CDS             complement(<1..723)
                     /locus_tag="VLD58_12595"
                     /inference="COORDINATES: protein motif:HMM:NF024371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3857 domain-containing protein"
                     /protein_id="HSB55194.1"
                     /translation="MRAAAAVMMAMGLGTVTTGPAPSRLSPRAQTPVVLPDTIYRLAV
                     DSTKYPTESFIYLLDDGVLRYEADGRGSRTYRQVVQVMKENAVDRWAEFSFRFQPRHQ
                     RLTVNWVRVVKPGGEVISDRPGISQDADVPAAMGDPSYVEEKVRRLSMPNVRPGTLVD
                     YSYTLEELEPYRRGDFFAPWTVNPGLPVRRSRLVLDTPAGFTPRVSAKNLDFKPVTVT
                     QGGRQITTWATQDVPKVEPEPFA"
     gene            complement(820..>1347)
                     /locus_tag="VLD58_12600"
     CDS             complement(820..>1347)
                     /locus_tag="VLD58_12600"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S16 family serine protease"
                     /protein_id="HSB55195.1"
                     /translation="LTGQLGDVMKESARAALSWVRAEAERLGIDPRFFDQNDLHMHVP
                     AGAIPKDGPSAGVTMATALISAMSGRPARHDMAMTGEITLRGRVLPIGGLKEKILGAV
                     RAGITSMVIPKENEPDLEDLPDVVRGRIQVHPVQELGEVLALTLRGASFREGRLLFGE
                     ESPRDVQPLSAAYQH"
BASE COUNT          211 a          462 c          468 g          206 t
ORIGIN      
        1 ggcgaacggc tccggctcca ccttgggcac atcctgggtc gcccaggtcg tgatctgccg
       61 gccgccctgg gtgacggtaa cgggcttgaa atcgagattc ttcgcggaga cgcggggggt
      121 gaagccggcc ggcgtgtcca gcaccaggcg ggagcggcgc acggggaggc cgggattcac
      181 cgtccagggg gcgaagaagt cgccccggcg atacggctcc agctcctcca gggtgtaact
      241 gtagtccacc agcgttccgg gccggacgtt cggcatcgag agccggcgca ccttctcctc
      301 gacgtaggac gggtcaccca tggcggcggg cacgtccgcg tcctgggaga tgccgggccg
      361 gtcgctgatc acctcgccgc cgggcttcac cacccgcacc cagttcaccg tgagccgctg
      421 gtggcggggc tggaagcgga acgagaactc cgcccagcga tccaccgcgt tctccttcat
      481 cacctggacg acctgtcggt aggtgcggct gccccggccg tcggcctcat atctcagcac
      541 accgtcatcg aggagataga tgaacgactc ggtggggtac ttcgtcgagt cgacggcgag
      601 ccggtagatc gtgtcgggca gaacgacggg cgtctgggct ctgggggaca ggcgggacgg
      661 ggcgggcccc gtggtcacgg ttcccaggcc catcgccatc atgacggcag cggctgcgcg
      721 caccgcgaat ctccggagaa tcaggtgccg aaagctacac ggtccgcggg agagggcgaa
      781 tcctcccgcg gaccgctgga gcgaaaccgg gcgtcccgct cagtgctggt aggccgccga
      841 cagcggctgc acgtccctcg ggctctcctc cccgaagagc agccgcccct cacggaatga
      901 cgccccccgc agggtgagcg ccagcacctc gcccagctcc tggaccggat ggacctggat
      961 tcggccccgg accacatcgg gaaggtcctc gagatcgggc tcgttctcct tcggaatcac
     1021 catgctggtg atcccggccc gtacggcgcc cagaatcttc tccttgagcc cgccgatcgg
     1081 caatacgcgg ccgcggaggg tgatctctcc cgtcatggcc atatcgtgtc gggccggccg
     1141 gcccgacatg gcggagatga gcgcggtggc catcgtgacg ccggcggacg gaccgtcctt
     1201 cggaatcgcg ccggccggga catgcatgtg caggtcgttt tggtcgaaga agcgcgggtc
     1261 gattcccagg cgctcggcct cggcgcgcac ccacgacagc gcggcgcggg ccgactcttt
     1321 catcacgtcg ccaagctgcc ccgtgag
//
LOCUS       DATIFF010000859         1107 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_413515, whole genome shotgun sequence.
ACCESSION   DATIFF010000859 DATIFF010000000
VERSION     DATIFF010000859.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_413515"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..459)
                     /locus_tag="VLD58_12605"
     CDS             complement(<1..459)
                     /locus_tag="VLD58_12605"
                     /inference="COORDINATES: protein motif:HMM:NF016635.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2 N-terminal
                     domain-containing protein"
                     /protein_id="HSB55196.1"
                     /translation="MRVYEIAKEVGIPNKDLIAKIRALGLEVNNHMSSLDADDVARIK
                     RSLEKERQSVAQPQQTQRLAPGGTVLRRRSSGERPGDGPVDDHSADREPMRRSEPERH
                     AATSGTAPAPTAGPAPVIRRRVVAEEPPTAAPGASSSPARPVVRAPETPVT"
BASE COUNT          142 a          375 c          398 g          192 t
ORIGIN      
        1 cgtgaccggg gtttcggggg cgcgcacgac gggcctcgcc ggggagcttg acgcacccgg
       61 cgccgcggtc ggtggttctt cggcaacgac acggcgacga atcactggcg cgggcccggc
      121 ggtcggcgcc ggcgctgtcc ccgaggtggc cgcgtgccgc tcgggctcgc tgcgccgcat
      181 cggttcgcgg tcggcgctgt ggtcgtccac gggtccgtcc cccggccgtt cgccgctaga
      241 tcgccggcga agcaccgtac ccccgggggc caagcgctga gtttgctgcg gctgcgccac
      301 cgactgcctc tccttctcca gcgagcgctt gatgcgagca acatcgtcgg catcgagtga
      361 agacatatgg ttgttcactt cgagaccgag cgctcggatc ttggcgatga ggtccttgtt
      421 ggggatcccc acctctttcg caatctcata gacgcgcatc ttcgctccgg tcgtccttct
      481 tcttcgtcgc cttgatccga gggggcattt ctacagtgtc tccatccgca aggccagggg
      541 cgttttgacc agcgttttgg aggggttgat cccccggatt gtcgtggatc ggtgacactt
      601 gggacacgat ctgggccaca tcggccgcgc cgatcggcct gcgaaagctt cgggatagcc
      661 cggctaccgt cacgcacgcc gggtcggggt gaacgtaggc gccgcggccg ggtcggcgac
      721 cggggcgccg caccgcaggt gcctcgcccg gcggcaccgc ctgcgcctcc gcaagagcgg
      781 aggcggtccc ggtagaccgg tcaggccagg tcgcgggcca ggtcgcgggc caggtcgcgg
      841 gatcgatcac cagccggggg ccctcggggt gcccacctcc cgtctggaac accagccgca
      901 cgagctcgcg ctgcggcgcg cgcttccggc agccggtgca ggtccggaga ggaatgtggc
      961 cggtcaggac gacacctccg agagccagct gatcgcgcgc tggcgaagcc gcgcgaggtc
     1021 tcccatgtcg atcccggtcg tggtcgcgat cgcctcgatc ggcgtcttga tcaggtcctc
     1081 gggcgagtgg atgttcgcgg tggcgag
//
LOCUS       DATIFF010000860         1263 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_413611, whole genome shotgun sequence.
ACCESSION   DATIFF010000860 DATIFF010000000
VERSION     DATIFF010000860.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_413611"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1227
                     /locus_tag="VLD58_12610"
     CDS             <1..1227
                     /locus_tag="VLD58_12610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55197.1"
                     /translation="DLAVLREKYGVPVARGPKDLREIPQYFGRAAAAREYGAYDIEIL
                     AEINNAPKQPWEAVRREADYYRQSGADLIDLGCTPGVAFPALGEMVRELCAAGMRVSI
                     DSFDRDEIRTAVAAGAELVLSVNGSNLSVVEDLRGTGTRVVAIPDFGTGIDTLEPTLN
                     ALERARVPYLIDPIIEPIGFGFMASLERYAEIHRRYPRAGQLMGVGNITELTSADSTG
                     VNALLIAVCQELGVTAVLTTEVIPWARGAVREIDVARRLMYHAVTQKTLPKGVDDRLV
                     TLKDPRVLAYTETELRELQARVTDPNYRIFADGATITVFNHERFVRGTDIHEIFDQLG
                     VKEASHAFYLGKELMKARVAITLGKTYRQEGQLAWGYLTPPEEPRREHVKLTMRKRGR
                     GGDRTSRRRGGPRRGD"
BASE COUNT          220 a          431 c          433 g          179 t
ORIGIN      
        1 gacctggcgg tgctgcggga gaagtacggc gtgcccgtgg cccggggccc gaaggacctg
       61 cgcgagatcc cgcagtactt cggccgggcg gcggcagccc gggagtacgg cgcctacgac
      121 atcgagattc tggccgagat caacaacgca ccgaagcagc cctgggaagc ggtccgtcgg
      181 gaggcggact actaccgcca gtccggcgcc gacctgatcg acctgggatg cacgcccggg
      241 gtggcctttc cggcgctggg cgagatggtt cgtgagctct gcgcggcggg aatgcgggtg
      301 agcatcgatt cctttgaccg cgacgagatc cggactgcag tcgccgccgg cgccgagctg
      361 gtgttgagcg tgaacggttc caatctgtcc gtggtggagg acctgcgcgg caccggcacc
      421 cgggtcgtgg ccatccccga tttcggaacg gggatcgaca ccctggagcc caccctgaac
      481 gcgctcgagc gggcacgcgt gccctatctg atcgacccga tcatcgagcc catcggcttc
      541 gggttcatgg cctcgctgga gcgctacgcc gagatccatc gccgctaccc ccgggcggga
      601 cagctcatgg gggtcggcaa catcacggaa ctcaccagcg ccgacagcac cggagtgaac
      661 gcgctgctga tcgcggtgtg ccaggagctc ggcgtgacgg cggtcctcac caccgaggtg
      721 atcccctggg cccgcggggc cgtccgggaa atcgacgtag cccggcggct gatgtatcac
      781 gcggtgaccc agaagaccct gcccaaaggc gtggacgacc ggctcgtcac gctcaaggac
      841 ccgcgcgtcc tggcgtacac cgaaacagag ctgcgcgagc tgcaggccag ggtgaccgat
      901 ccgaattacc ggatctttgc cgacggcgcc accatcacgg tgttcaacca cgagcgcttc
      961 gtgcgcggca ccgacatcca cgagatcttc gaccagctcg gcgtgaagga ggcctctcac
     1021 gcgttctatc tcggcaagga gctgatgaag gccagggtcg cgatcaccct cggcaagacc
     1081 taccggcagg aaggccagct cgcctggggg tacctcaccc caccggagga acctcgccgg
     1141 gagcacgtca agctcaccat gcgcaagcgc gggcgaggtg gcgaccggac ctcccgccgc
     1201 cgaggcggac cgcggagggg cgactaggat gacgccgctc cccctggtcc acgagctgct
     1261 ccc
//
LOCUS       DATIFF010000861         1431 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1031008, whole genome shotgun sequence.
ACCESSION   DATIFF010000861 DATIFF010000000
VERSION     DATIFF010000861.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1431
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1031008"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..321)
                     /locus_tag="VLD58_12615"
     CDS             complement(<1..321)
                     /locus_tag="VLD58_12615"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HSB55198.1"
                     /translation="MTTTPLEARVRSTLRAIPDYPKPGIVFQDITPVLADGPLFREVI
                     EALAQPFRTAGVTHVLGIEARGFILGGAVAHQVSAGFVPIRKKGKLPFKRVTIGYSLE
                     YGIDE"
     gene            complement(318..590)
                     /locus_tag="VLD58_12620"
     CDS             complement(318..590)
                     /locus_tag="VLD58_12620"
                     /inference="COORDINATES: protein motif:HMM:NF012911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HSB55199.1"
                     /translation="MTSRFLIAGEVQGVGFRWYVARHARALGLSGFARNLPDGRVEVV
                     ADGPDAGALARLEALLRAGPAHARVTGVVREDGINAALPPGSFDIR"
     gene            complement(587..1228)
                     /locus_tag="VLD58_12625"
     CDS             complement(587..1228)
                     /locus_tag="VLD58_12625"
                     /inference="COORDINATES: protein motif:HMM:NF008102.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HSB55200.1"
                     /translation="MDLLRRFIDVFLHLDTHLSQVIAQYGTGTHLILFLIVFCETGLV
                     VTPFLPGDSLLFAAGTFAALGALDLWLVVLLLIVAAVLGDTVNYWAGAYVGPRAFSGN
                     VRFLKREYLERTQAFYERHGGKTIILARFVPIIRTFAPFVAGIGAMSYPRFIAYNVVG
                     VVLWVGLFVLGGYFFGNIPAVRQNFTLVILAIIAISVLPIAVEAVRGWRSRPA"
     gene            complement(1246..>1431)
                     /locus_tag="VLD58_12630"
     CDS             complement(1246..>1431)
                     /locus_tag="VLD58_12630"
                     /inference="COORDINATES: protein motif:HMM:NF013315.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HSB55201.1"
                     /translation="ASPEIPAPLVEQLAPGGRMVIPLGDRANQTLTLVRREGDELLTS
                     TVADVRFVPLLGEFGFR"
BASE COUNT          248 a          510 c          487 g          186 t
ORIGIN      
        1 ttcgtcgatg ccgtattcca gcgagtaacc gatggtgacc cgcttgaacg gcagcttgcc
       61 cttcttgcgg atcggcacga agccggccga gacttgatgc gccaccgcgc cgccgaggat
      121 gaagccgcgg gcctcgatcc cgagcacgtg agtcaccccc gccgttcgga acggctgcgc
      181 cagggcctcg atcacctcgc ggaacagcgg cccgtcggcg agcaccgggg taatgtcctg
      241 aaagacgatc cccggcttgg gatagtcggg aatcgcccgc agcgtggacc gtacccgcgc
      301 ctccagtggt gtcgtcgtca tcggatatcg aagctccctg gcggcagcgc cgcgttgatc
      361 ccgtcctccc gtaccactcc ggtcacccgc gcgtgagccg gccccgcccg cagcagcgcc
      421 tcgagccgcg cgagcgcccc ggcgtccggc ccgtccgcca cgacctcgac ccgtccgtcg
      481 ggaagatttc gggcgaaccc cgacagcccc agggcccggg catgacgggc cacgtaccag
      541 cggaatccca cgccctgcac ctcgcccgcg atcaggaacc ggctggtcac gccggccggc
      601 tccgccaccc ccggaccgcc tcgaccgcga tcggcagcac cgagatcgcg atgatggcga
      661 ggatgaccag ggtgaagttc tgccgcaccg cggggatgtt gccgaagaag tatccgccca
      721 gcacgaacag cccgacccac agcaccaccc cgaccacgtt gtacgcgatg aaccggggat
      781 agctcatcgc cccgatgccc gccacgaacg gcgcgaaggt gcggatgatg gggacgaagc
      841 gcgccaggat gatcgtcttc ccgccgtgcc gctcgtagaa cgcctgggtg cgctccaggt
      901 actcccgctt gaggaaccgc acgttgccgc tgaacgcccg cggcccgacg taggcgccgg
      961 cccagtagtt caccgtgtcg cccaggacgg cggccacgat gagcaggagc accaccagcc
     1021 acaggtcgag cgcgccgagc gcggcgaagg tgccggccgc gaacaggagc gagtcccccg
     1081 gcaggaacgg cgtcaccacc agtcccgtct cgcagaagac gatgaggaac aggatgaggt
     1141 gggtcccggt tccgtactgg gcgatcacct ggctgaggtg ggtgtccagg tggaggaaga
     1201 cgtcgatgaa gcggcgcagc agatccatgc aggtctctcc ggcggctagc ggaagccgaa
     1261 ctcgccgagc aggggcacga agcggacgtc cgccaccgtg ctggtgagaa gctcgtcgcc
     1321 ctcgcggcgc acgagcgtca gggtctgatt ggcgcggtct ccgaggggga tgaccatccg
     1381 gccgccgggg gcgagctgct ccaccagcgg ggccgggatc tcgggcgagg c
//
LOCUS       DATIFF010000862         2161 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1953176, whole genome shotgun sequence.
ACCESSION   DATIFF010000862 DATIFF010000000
VERSION     DATIFF010000862.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2161
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1953176"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1107
                     /locus_tag="VLD58_12635"
     CDS             <1..1107
                     /locus_tag="VLD58_12635"
                     /inference="COORDINATES: protein motif:HMM:TIGR03592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidC/Oxa1 family insertase periplasmic-domain
                     containing protein"
                     /protein_id="HSB55202.1"
                     /translation="GGTLLVGMGPGLRNTEADSVEHARELGVVVKDTKATLTRFGKLK
                     LGQSQAFSGPFEWVAVKSKYFVTALLAVDSTGSGRNGGIAGANAAATDTAMRTTTGAA
                     ISVGLPVAAAGGFRFQAYVGPLEYPRLRAIGHDFDDVNPYGWPGFRTIIRPVALGARS
                     LLVWLHDSLGLAYGFGLILFGIVIRIVLWPLNQKAMRSTMAMQAIQPIMKEIQEKYKS
                     DPQRQQQEMFKLYKEHNVNPLGGCWPMLLPWPILLAFFFVFQNTIELRGAPFLWLPDL
                     SRPDPIYVIPVLMGLSMYVLSKIGQIGMEPNPQMKMMLYMMPGMMTLLFIRFASGLNL
                     YYTVMNLASLPQQWMLSKERMKRMPPAPPPAPRK"
     gene            1132..>2161
                     /gene="mnmE"
                     /locus_tag="VLD58_12640"
     CDS             1132..>2161
                     /gene="mnmE"
                     /locus_tag="VLD58_12640"
                     /inference="COORDINATES: protein motif:HMM:TIGR00450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HSB55203.1"
                     /translation="MLSDPIAALATAPGRSALAVVRLSGTGAMEVAGRVVRGGVSPAS
                     SPERTARLVTFQATDGSPIDRGLVTVFRAPHSFTGEDLVEFSCHGGLLVSAELLGALY
                     SAGARQAAPGEFTRRAVLNGKLDLLQAEAVADLIEATAPAQRRAALHQLDGGLSRRLL
                     AMREALLDLLALLAYDIDFPEEDDGPVPTSRLRSALDEASKSVARLLATAPAGERLRE
                     GALVVLAGRPNTGKSSLFNAILGYERALVTEIPGTTRDAIEAATTVRGWPVRLADTAG
                     LRDADDRIERLGIEVSRRYLAAADLILLCVEAGETISQGEREFASAPNVLLARTKCDL
                     AEVQSLQDL"
BASE COUNT          328 a          734 c          753 g          346 t
ORIGIN      
        1 gggggaacgc tcctcgtcgg catggggccg ggactccgga acaccgaggc cgacagcgtc
       61 gagcacgccc gcgagctggg cgtcgtggtg aaggacacca aggcgacgct cacccgcttc
      121 gggaagctca agctcggcca gtcgcaggcg ttcagcggcc cgttcgagtg ggtggccgtc
      181 aagtcgaagt acttcgtgac ggcgctcctc gcggtggatt cgaccgggag cggccggaac
      241 ggggggatcg cgggggcgaa cgccgcggcc accgacaccg ccatgcggac cacgaccggc
      301 gccgcgatca gcgtcggact cccggtggcc gcggccggcg gcttccgctt ccaggcgtac
      361 gtggggccgc tggagtaccc gaggcttcgc gcgatcgggc acgatttcga cgacgtcaat
      421 ccgtacgggt ggcccggctt ccggacgatc atccggccgg tggcgctcgg ggcacgttcg
      481 ctcctggtgt ggctgcatga cagcctgggc ctggcctacg gattcgggct gatcctgttc
      541 ggcatcgtca tccggatcgt cctgtggccg ctcaaccaga aagccatgcg ctccacgatg
      601 gccatgcagg ccatccagcc gatcatgaag gagatccagg agaagtacaa gagcgacccg
      661 cagcgacagc agcaggagat gttcaagctc tacaaggagc acaacgtcaa tccgctgggt
      721 ggctgctggc cgatgctgct gccatggccg atcctgctgg ccttcttctt cgtcttccag
      781 aacacgatcg agctgcgggg ggcgccgttc ctctggcttc ccgacctttc gcgacccgac
      841 ccgatctacg tgattccggt gctgatgggg ctgtcgatgt acgtgttgag caaaatcggc
      901 cagatcggca tggagcccaa tccccagatg aagatgatgc tctacatgat gccggggatg
      961 atgaccctgc tcttcatccg gttcgcctcc gggctcaatc tgtattacac cgtgatgaac
     1021 cttgcgagcc tgccgcagca gtggatgctc tccaaggagc ggatgaagcg gatgcccccg
     1081 gcgcccccac ccgcgccgag gaagtagccg agggcggcgc cgggatccgg aatgctctcc
     1141 gacccgatcg ccgcgctggc gacggcgccg ggcaggtcgg cgctggcggt cgtgcggctc
     1201 tcgggcacgg gtgcgatgga ggtagcgggc cgcgtggtgc ggggtggggt ctcgccggcc
     1261 agctccccag aacgaacggc gcgtctggtc acctttcagg ccaccgacgg gagtcccatc
     1321 gaccgggggc tggtcaccgt cttccgcgcc ccgcacagct tcaccggcga agatctcgtc
     1381 gaattctcct gtcatggcgg cctgctcgtc tccgcggagc tcctcggcgc cctgtattcc
     1441 gccggcgccc ggcaggccgc tcccggagag ttcacccgcc gggcggtgct caatggcaag
     1501 ctcgatctcc tgcaagccga agcggtcgcg gacctgatcg aggcgacggc tccggcgcag
     1561 cgccgggccg cgctccacca gctggacggg ggcctttccc gccggctcct cgcgatgcgg
     1621 gaggccctgc tcgacctgct cgcgctgctc gcctacgaca tcgacttccc cgaagaggac
     1681 gacggtccgg tgcccaccag caggctccgg tcggcgctcg atgaagcctc caagtcggtc
     1741 gcacgcctcc tcgccaccgc gccggcgggg gagcggctgc gggagggggc cctggtggtg
     1801 ctggccggac gcccgaacac gggaaagtcc tccctcttca acgcgatcct ggggtacgag
     1861 cgagctctcg tcaccgagat ccccggaacg acgcgcgatg cgatcgaggc cgccacgacc
     1921 gtgcgggggt ggccggtgcg cctggcggac accgccgggc tccgtgacgc ggatgaccgg
     1981 atcgagcgtc tcggcatcga ggtgagccgg cgctacctcg ccgcggcgga tctgatcctt
     2041 ctttgcgtgg aggcgggtga gacgatctcc cagggcgagc gggagttcgc ctcggctccc
     2101 aacgtgctcc tggcgcgcac caagtgcgac ctggcggagg tgcaatccct gcaggacctg
     2161 g
//
LOCUS       DATIFF010000863         1070 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1031207, whole genome shotgun sequence.
ACCESSION   DATIFF010000863 DATIFF010000000
VERSION     DATIFF010000863.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1031207"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..812
                     /locus_tag="VLD58_12645"
     CDS             <1..812
                     /locus_tag="VLD58_12645"
                     /inference="COORDINATES: protein motif:HMM:NF013132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HSB55204.1"
                     /translation="ASAPVAILTVVAAWWLGPRFIFPVPPAQRVPAIPGGMALVERER
                     KAMGRLSPREWRALAIFGLVLFLWATDRFQQRWFGLELGASVAAMIGVVIALAPRIGV
                     IEWGDTDIPWHLMVFSAGAYAGGLALEGTGAAKWGVDRIFGGLSLGGIAFGWAYAAVL
                     AIMLYSHLLSTSKTVRTVIMIPAIIMLSRRLGWDPAALALPAAFTIDWVIGLPISGKP
                     NVILFGTNQYSAKDNLKYGLAVCTFGFGLLLLAGATWFHWLGLVPAFAARP"
     gene            909..1070
                     /locus_tag="VLD58_12650"
                     /pseudo
     CDS             909..1070
                     /locus_tag="VLD58_12650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000183325.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
BASE COUNT          138 a          393 c          361 g          178 t
ORIGIN      
        1 tcgcctcggc cccggtcgcg atcctgacgg tcgtggcggc gtggtggctc gggccccggt
       61 tcatcttccc tgttccaccg gcccagcggg tcccggccat tcccgggggg atggccctcg
      121 tggagcggga gcgcaaggcg atgggccggc tgagtccgcg cgagtggcgg gcgctcgcga
      181 tcttcggcct ggtgctcttc ctctgggcca ccgaccggtt ccagcagcgc tggttcgggc
      241 tggagctcgg cgcctccgtc gccgcgatga tcggcgtggt catcgccctc gcaccgcgaa
      301 tcggcgtgat cgagtggggc gacaccgaca tcccctggca cctcatggta ttcagcgccg
      361 gggcctacgc ggggggactc gcgctcgagg ggaccggagc cgccaaatgg ggcgtggacc
      421 ggatctttgg cgggctctcg ctcggaggca tcgccttcgg ctgggcatac gcggccgtcc
      481 ttgccatcat gctctacagc cacctcctgt ccacctcgaa gacggtcagg acggtcatca
      541 tgatcccggc gatcatcatg ctgtcccgcc ggctcggctg ggacccggcg gcgctggcgc
      601 tcccggcggc cttcacgatc gactgggtga tcggactccc catcagcggg aagcccaacg
      661 tcatcctctt cggcacgaac cagtactccg cgaaggacaa tctgaagtac ggcctcgccg
      721 tctgcacttt cggcttcgga ctgctgctgc tggcgggggc cacctggttc cactggctgg
      781 gactggtccc cgccttcgcc gcgcgaccct gagcggggcg ggggcccccc ggggagcgcg
      841 gcgaacaccc ggtccccggc gggcgccccc ggctggtaga tttccggccg atgacccgtt
      901 ccggccacat cgcgctcgcc ggcaggccca acgtcggcaa gtcgtccctc ctcaacgcgc
      961 tcgtgggaca gaaggcactc gcccgtacgt ccgacacgcc cgggcggacg caagagctca
     1021 acttcttcac cgccgacggc ccgctcacca tcgtcgacat gcccgggtac
//
LOCUS       DATIFF010000864        12014 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1338337, whole genome shotgun sequence.
ACCESSION   DATIFF010000864 DATIFF010000000
VERSION     DATIFF010000864.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 12014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12014
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1338337"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..541
                     /locus_tag="VLD58_12655"
     CDS             <1..541
                     /locus_tag="VLD58_12655"
                     /inference="COORDINATES: protein motif:HMM:NF012457.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="HSB55205.1"
                     /translation="WPTFPVADFDLIRTPIDWLGINYYTRAVTRDDPTDWPVRAGRVR
                     QPQHTYTAMDWEVYPQALTDILLWVRQRYGSMPVYITENGAAFSDPPFADGTVDDPLR
                     VQYYREHLLAAHRAMTQGVDLRGYFAWSLLDNFEWSAGYAKRFGLVAVDRETQRRTPK
                     ASARFYTEVIRSDGAVLGR"
     gene            complement(496..4377)
                     /locus_tag="VLD58_12660"
     CDS             complement(496..4377)
                     /locus_tag="VLD58_12660"
                     /inference="COORDINATES: protein motif:HMM:NF028476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55206.1"
                     /translation="MGPRAQLLSNGRYHTLVTGSGAGRSMLGEIALTRWSADRTRDAD
                     GFFLYVRDLATGRAWGAGLQPVALEPDGWRARSGPGRAELVRTDEGVETRLDCCVDPN
                     HDIEYRLLTLVNRSRGPLQLEVTSYVEVALNHPAADAAHPAFSKLFVQTEYLSREQGL
                     LARRRPRSPEEKPIYLGHTLRLVGYQPVGQLEWETDRARFIGRGKSTANPAALAGKAP
                     LSGTVGSVLDPCCAIRRKLIIPSGGVARLVASLAAGYEREQVIAALDPWRVMQLPTIF
                     AEARRADLARLEDAQFSGTERRRLPQLTGAMAYGSPLATSGAPLPPASELASGDLRTI
                     GLSGTLPLLVAHLEGTGDGATANYLARLANYWRAGGIGVDLLVLHQSDKSDLLLPRSG
                     PGRHLGITIAKPGTKLPPELRRLAERSARLVVKGALPAETGAESLSEPVVATATLAVR
                     TGKEERLPASEALTHFNGAGGFASDGTEYVIRLPLDAEGHRRPPLAWTNVIANDEIGC
                     LTSDGGFGYTWSANSRENRLTPWSNDPISDPAGEAIYLRDEDRRAFWSPTPGPAPGAG
                     DYEVRHGFGYSLTRHQSQELEQEVLTFVPQRDGVKLVRVRATNRSTTRRRLSFFAYAE
                     WVLGVIPADTRRYVVTTRDQSTGAILAVNPHNGEFSTRVAFAALLTQPGNRQVEWTAD
                     RGQFLGQGGSVASPLAVRELRQLDGQAGEGYDPCAAFRLPVEMAPGATIECVFALGQT
                     ANREEALALVRKYQNPGAVDRALEQVRGFWRDTLGRVQVETPSPAIDLMLNGWLAYQN
                     LACRVWARSAFYQSGGAFGFRDQLQDAAALIYLDPELTRRQILLHAGHQFAEGDVLHW
                     WHPPADKGIRTRFSDDLLWLPYITAGYIRHTGDASVLDAQAPFVAARLLNEGEDEVFL
                     HPTTAGSADVYSHCCRALDRSLTRGVHGLPLMGTGDWNDGMNRVGREGKGESVWLGFF
                     LYHILEIFLPWCDKRGDAARAAKYRGYQAKLAAALNSEGWDGEWYRRAWYDNGAPIGS
                     SASDECRIDAIAQAWAILSRVAPAPKAEQALDSLEKHLVAEGDGIIRLLTPAFDRTPQ
                     DPGYIKGYLPGVRENGGQYTHGALWAVRALAEAGRGERAARLLEMLSPVSHGADAGAV
                     DVYRVEPYVIAADVYGVAPHLGRGGWTWYTGSAGWMFRVGLESILGLTMHQGEWLELR
                     PCVPREWPGFTIRYRVPGTETSYRISVKQGGGLPTQAALDGTALGVVDGAVRIPLSPD
                     GRRHEVKVELGPDVGPRYRPSTAPSERMTSV"
     gene            complement(4402..7539)
                     /locus_tag="VLD58_12665"
     CDS             complement(4402..7539)
                     /locus_tag="VLD58_12665"
                     /inference="COORDINATES: protein motif:HMM:NF012956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="discoidin domain-containing protein"
                     /protein_id="HSB55207.1"
                     /translation="MIVPVLLLASLLAQRDSTGPRLVDGFEDARLWSAHPADGVKASV
                     HSDRGHTGRGLRLDFDFQGGGGYAIARRTLPLDLPPNYALSFWIRGRALVNTLEFKLI
                     DGSGENVWWYTERDRPFSGEWQRVTIRRRQISFAWGPLGGGELSHAAALELVVTAGQG
                     GGRGSVWFDDLVLTPLPPPGRNTRAPVARATAALPRYGAGNAVDGDSTTAWRAAAKPV
                     DLTVDFGEPREFGGISLAWLEGNGARDYNVLLSGTGAAWEVIRKVRGGNGGRDDLFLP
                     NKEGRYLRLQMLRPEGETGYGLREITLLPVEVGESLNAFWTTVSKGAPQGTYPRYFSG
                     RRAYWTVVGLDSAREEALINEDGAIEAGKGLFSVEPFLADSGRLYSWADARTKTALAE
                     GDLPLPSVTWTLPGLELTVSAFAIGPASSSSVVARYRVRNTSPTARAPTLYLAVRPFQ
                     VNPPWQFLNTPGGAAKIESLEWGGQRLKVNGDRLVIPFTAPAQVAATTYDGGEIVSHL
                     RDGRLPATTSVRDGFGAASGALAWSFRLAPGDTATAAIEIPLTTSLRANLAPGSLRLL
                     DQAEAETIGWWEEALNRATIRLPAAGDHLARTIRSTLGWIMVNRDEASIQPGSRSYER
                     SWIRDGSLTSAALLRFGHPEMVRDFIRWYAAHLYADGKVPCCVDRRGADPVPEHDSHG
                     EFIYLVMEYWRHTGDTTLLASMWPRVLKAAGYIDSLRQTHRTPEYQDSAKRVFWGLLP
                     PSISHEGYSAKPMHSYWDDFFALRGLKDAAAMALVLHHDEKAARLGAMRDEFRRDLLA
                     SLERVRAEKRIEYLPGAADLGDFDATSTTIALTPVGEQANLPADALRQTFERYWQQAS
                     VRWSSDTTWEAYTPYELRSVGALLRLFGRERALTLLNHFLDDQEPPGWNQWPEVVWRD
                     RRAPKFIGDSPHTWVGSDFLRSASDLFAYEEESDSSLVIAAGVDQRWLADSGVAVRGV
                     STWWGPLSYTMRQDGERVVFHLDGGLTVPPGGVRLVAPAMAGLRQVTVNGGRATLDGG
                     SLRLRSVPADVIFEY"
     gene            complement(7536..8357)
                     /locus_tag="VLD58_12670"
     CDS             complement(7536..8357)
                     /locus_tag="VLD58_12670"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HSB55208.1"
                     /translation="MNARVRSLLLHLMLLAAAFLAAAPLLWMVSASLMRTGEANTSPP
                     PLLPSQPTLEHYRALFTSLSLGRYLLNSLIIAVGGTLMGVFITAMAGYAFAKLRFPGR
                     QPVFKALLAGMVIPGQVAMLPMFLLLREMGLINTLFGAMIPVLAPIYAIFLVRQYAQT
                     IPDDLLDAARIDGAGEFLIFRTVVLPSIAPVLATLGVFTFLSAWNDFMWPLIVLSDDA
                     RYTLPVALANLAGEHVLDVELMMGGAVVTVLPVFIAFLFLQRYYIQGIMTGSVKG"
     gene            complement(8354..9244)
                     /locus_tag="VLD58_12675"
     CDS             complement(8354..9244)
                     /locus_tag="VLD58_12675"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HSB55209.1"
                     /translation="MSSVTARAEARAGWAFVAPGLLLIGIFFAIPVLGAFLLSFTDFD
                     IYSIGDPASTRFVGLRNYTELLANPLFWTALKNTLYFVVVGGPLSALTSLVAALLVHS
                     KLVRGKPFFRAAFFAPWVTTLVAVALVWRYLYHPHYGPINALLGVFGIGPIDWLGSPA
                     WSMPAIILLSVWKNFGYNMLVFLAGLQSIPEELYEAAQLDGAGGWQRFRHVTVPMLGP
                     TFVFVGVVTMIAAFQIFSEPYVMTQGGPLKSTTTLVLFMYEEGFRWWRLGIAAAIAVV
                     LFLLTLAGTLLQLRLRNEPL"
     gene            complement(9241..10512)
                     /locus_tag="VLD58_12680"
     CDS             complement(9241..10512)
                     /locus_tag="VLD58_12680"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HSB55210.1"
                     /translation="MTLSWRGALLCLLGAGCRSAATEGTTLRFWAFGREGEVVQELVR
                     GFEAEHPGVRVRVQQIPWTAAHEKLLTAHVGRATPDIAQLGNTWIPEMVTLGALEPLQ
                     HLQAGSTVSEANNYPGIWATNVVDGALYGIPWYVDTRVLFYRKDLLAQAGYREMPKDW
                     TGWLAAMRAIRRLGGPGKYAIFLPMNEWPPQAILGLQQGSPLVSDSGYGVFRQPAFAR
                     AFDFLLALYRDSLAPPVRGNEIANLYQEFSRGTFAMYITGPWNLGEFRRRLPAELKHA
                     WGTAALPGPGGPDSGVSLAGGSSLVIFRNSPNQKLAWDLIEYLARPEQQIRFYRLTGD
                     LPARREAWSDPALASDSEAQAFRVQLARAVPTPMIPEWELVTTKLMDQTEAAVRGGTS
                     PEAALSTLDAQVDRLLERRRFLLARRRVERQ"
     gene            complement(10509..>12014)
                     /locus_tag="VLD58_12685"
     CDS             complement(10509..>12014)
                     /locus_tag="VLD58_12685"
                     /inference="COORDINATES: protein motif:HMM:NF021596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucoamylase family protein"
                     /protein_id="HSB55211.1"
                     /translation="GIHLLTPKAAGILTGACGRQHRSPMRLSPASRLLPLLLLCIACT
                     SAYSPPAAPPADGPRAQALLDTLEQRTFDFFWERSDPATGLTPDRWPNETFSSIAAVG
                     FALTAYPVGAERGYITRTQAAERTLATLRWFWQAPQGPDPSGTAGYQGFFYHFLTMPG
                     GARFRDVELSTVDTGLLMMGVLFCREYYDGTDVTETGIRATADSLYRRVNWTWAQRTP
                     PRINMGWKPEDPNGGWQPLDWMGYNEAMLVYLLALGSPTHTIDSTAWAAWSNTYTWGT
                     FRGQSHLGFAPLFGHHYTHVWVDFRGIQDPYMQGKGIDYFENSRRATLAQRSYAVANP
                     MGWIDYGANIWGLSASDGPADVTLDFNGASRRFFTYAARGASFNEVRDDGTIAPTAAA
                     GSLAFAPEIVLPALVAMRERYGDDLFGQYGFLDAFNPSFRYSGQATAGKVVAGKGWFD
                     TDYLGIDQGPIIAMIANYRSDLVWKHMRASPYLIRGLRRAGFRGGWLDRAP"
BASE COUNT         1947 a         4118 c         4159 g         1790 t
ORIGIN      
        1 ctggcccact ttcccggtgg ccgacttcga tctcatccgg acgccgattg actggctcgg
       61 catcaactac tacacccggg ccgtcacccg ggatgacccc accgactggc cggtgcgcgc
      121 cggccgggtg cgccaaccgc agcataccta taccgccatg gactgggagg tctatcccca
      181 ggccctcacc gatatcctgc tctgggtgcg gcagcgctac gggtccatgc cggtctacat
      241 caccgagaac ggcgcggcct tctcggatcc acccttcgcc gacggcacgg tcgacgatcc
      301 gctccgggtg cagtattacc gcgagcacct gctggcagcc catcgcgcca tgacgcaggg
      361 cgtcgacctg cgcggctact tcgcctggtc actgctcgac aatttcgagt ggagcgcggg
      421 ctacgccaaa cgtttcggcc tggtcgcggt cgaccgcgaa acccagcggc gcactcccaa
      481 ggcgagcgcc cggttttaca ccgaggtcat ccgctccgac ggcgcggtac tggggcgata
      541 gcgcggcccc acgtcgggac ccagctccac cttcacctcg tggcgccgac catcgggaga
      601 cagcgggatc cgcaccgcgc catccaccac gccgagcgcc gtgccgtcga gcgcggcctg
      661 ggttggaagt cctccgccct gcttcacgct gattcgataa ctggtctcgg tcccgggaac
      721 gcgatagcgg atggtgaacc cgggccattc ccgcggtaca cagggcctca gctccagcca
      781 ctcaccctgg tgcatggtca gccccaggat cgactccagt cccacccgga acatccatcc
      841 cgccgaaccg gtataccagg tccatccgcc ccggccgagg tgcggtgcaa caccgtagac
      901 gtcggccgcg atgacgtagg gttctactcg atacacatcc accgcaccgg catcggcgcc
      961 gtgggaaacc gggctcagca tctcgagcag ccgcgccgcg cgctctcccc ggccggcctc
     1021 ggccagggcc cgcaccgccc agagcgcgcc atgggtgtac tggccgccgt tttcgcgcac
     1081 gccgggtaga tagcctttga tgtatcctgg atcctgcggg gtgcggtcga acgccggcgt
     1141 aagcagccgg atgataccgt cgccctcggc tacgagatgc ttctcgagcg agtctagcgc
     1201 ctgctccgcc ttcggcgccg gcgccactcg cgagaggatg gcccaggcct gcgcgatcgc
     1261 gtcgattctg cattcgtcgc tcgcgctgga gccgatcggg gcgccgttgt cgtaccatgc
     1321 ccggcggtac cactccccat cccacccttc gctgttgagc gccgccgcga gcttcgcctg
     1381 gtagccgcgg tacttcgcgg cccgagccgc gtcgccccgc ttatcgcacc agggcaggaa
     1441 gatctcgagg atatggtaga ggaagaagcc gagccagacg ctttcgcctt tgccctcgcg
     1501 gcccacccgg ttcatcccgt cgttccagtc gcccgtcccc atcagcggaa ggccatgcac
     1561 cccgcgggtg agtgagcggt cgagcgcccg gcagcagtgg ctgtagacgt cggccgaccc
     1621 ggcggtggtg ggatgaagaa agacctcgtc ttcgccctcg ttgaggaggc gggccgccac
     1681 gaaaggcgcc tgcgcatcca gcacgctggc atcgccggtg tgccggatgt agcccgcggt
     1741 gatgtagggg agccagagga ggtcgtcgct gaaccgggtc cggatgccct tgtcggccgg
     1801 cgggtgccac cagtggagca catcgccctc ggcgaactgg tgccccgcgt ggagcaggat
     1861 ctgccggcgg gtgagctcgg gatcgaggta gatcagcgcg gcggcgtcct gcagctggtc
     1921 gcggaagccg aaggcaccac ccgactggta gaaggccgaa cgggcccaga cccggcaggc
     1981 gaggttctgg taggcgagcc acccgttgag catcaggtcg atcgcgggtg aaggcgtttc
     2041 cacctggacc cggcccagcg tgtcgcgcca gaaaccacgc acctgctcca gggcccgatc
     2101 gacggcgccg gggttctggt acttccgcac cagcgccaat gcctcttcgc ggttggcggt
     2161 ctgacccagc gcaaagacgc actcgatggt ggcgcccggc gccatctcga ccggaagccg
     2221 gaacgcggcg caggggtcgt aaccttcacc ggcctggccg tcgagctgac ggagctcccg
     2281 cacggccagc ggcgacgcca cgctgccgcc ctggcccagg aactggcccc ggtccgcggt
     2341 ccattccacc tggcggttgc caggctgtgt cagtagcgcg gcaaaggcga cccgggtcga
     2401 gaactctccg ttgtgcggat tcacggcgag gatcgcgccg gtcgactgat cgcgggtagt
     2461 caccacgtag cggcgggtat ccgccggaat cacccccagc acccactcgg catacgcgaa
     2521 gaaggacagc cgccggcggg tcgtggaacg gttcgtggcc cggacccgca ccagcttcac
     2581 gccgtcccgc tggggcacga aggtgaggac ctcctgttcc agctcctggc tctgatgcct
     2641 ggtcagggag tagccgaagc catgacgcac ctcgtagtca ccggcaccgg gtgcgggacc
     2701 cggggtcggc gaccagaacg cgcggcggtc ctcgtcccgc agatagatcg cctccccggc
     2761 gggatcggat atcggatcgt tggaccaggg ggtgagccgg ttctcccggc tgttggccga
     2821 ccaggtgtag ccgaagccgc cgtcactggt gaggcacccg atctcgtcgt ttgcgatcac
     2881 attggtccat gcgagcggcg ggcgccgatg cccttccgcg tccagcggga gccggatgac
     2941 gtactcggta ccgtcggagg cgaagccgcc agcgccattg aagtgagtga gtgcctcgct
     3001 ggccggaagg cgctcttcct tgccggtccg caccgcgagg gttgccgtgg ccacgaccgg
     3061 ctcgctcagc gattccgcac cggtctcggc cgggagcgcc cccttcacca ccagccgggc
     3121 cgagcgttcg gcgaggcgcc gcaactcggg aggaagcttc gtccccggct tcgctatggt
     3181 gatgccaagg tggcggcccg ggccggagcg ggggagcagg aggtcgctct tgtcggactg
     3241 gtgcaggacc aggagatcca cgccgatacc gcccgcccgc cagtagttgg caagcctggc
     3301 gaggtagtta gcggtggcac cgtcgcccgt gccctcgagg tgggcgacca ggagcggaag
     3361 ggttccgctg agcccgatgg tgcggaggtc gccgctggcc agctcgctgg ccggagggag
     3421 cggtgcaccg gaggtcgcca gcggtgagcc gtacgccatc gcgccggtga gctgcggcaa
     3481 ccgccgccgt tcggtgcccg agaactgggc atcctccagc cgcgcgaggt cggcccgccg
     3541 ggcctcggcg aagatggtcg ggagttgcat cacccgccac ggatcgagcg cggcgatgac
     3601 ctgctcccgc tcgtagcccg cggcgagcga ggcgaccagg cgcgccaccc cgccgctcgg
     3661 gatgatcagc tttcggcgga tcgcgcagca gggatcgagt acgctcccga cggtgccgga
     3721 gagcggcgcc ttgcccgcga gcgctgccgg gttggcggtg ctcttcccgc ggccgatgaa
     3781 gcgggcccgg tcggtctccc attccagctg gcccaccggt tggtagccca ccaggcgcag
     3841 ggtgtggccg aggtagatgg gcttctcctc cgggctccgg ggacgccgcc gggcaaggag
     3901 cccctgctcg cgggagagat actcggtctg gacgaagagc ttggagaagg ccgggtgggc
     3961 cgcgtcggcg gccggatgat tgagcgccac ctcgacgtag ctcgtcactt cgagctggag
     4021 cggtccccgg ctccggttga ccagggtcag cagccggtac tcgatgtcgt ggttcgggtc
     4081 gacgcagcag tcgagccggg tctccacgcc ctcgtcggtg cgcaccagct cggcccgtcc
     4141 cggcccggag cgcgcccgcc acccgtcggg ctcgagcgcg acgggctgca ggccggcgcc
     4201 ccaggcccgg ccagtcgcca ggtcgcggac atacaggaag aatccgtcgg catcgcgggt
     4261 gcgatcggcg gaccagcggg tcagggcgat ttcgcccagc atcgacctgc cggcgcccga
     4321 tccggttacc agggtgtgat accggccgtt cgacagcagc tgggcacgcg gtcccatcgt
     4381 cagttctgcc tccagagcat ttcagtactc gaaaatcacg tctgccggga cactgcgaag
     4441 ccggagcgaa cctccatcca gcgttgcgcg gccgccattc accgtcacct gcctgagccc
     4501 tgccatcgcg ggcgcgacca gccgtactcc ccctggtgga accgtgagcc cgccgtcgag
     4561 atggaacacc actcgctcgc catcctgccg catggtatag gaaaggggtc cccaccaggt
     4621 gctcacgccg cgaaccgcca ctccggagtc tgccagccag cgctggtcca cacccgccgc
     4681 gatcaccagc gaactgtccg actcttcctc ataggcaaag aggtccgagg ccgaacggag
     4741 aaaatccgac cccacccagg tgtggggaga gtcgccgatg aatttcgggg cccgccggtc
     4801 tcgccagacg acctcgggcc actggttcca tcctggcggt tcctggtcgt cgagaaaatg
     4861 gttcagcagc gtgagcgccc gctcccgccc gaagaggcgg aggagtgcgc cgaccgaacg
     4921 cagttcgtac ggggtgtacg cttcccaggt ggtatcgctg ctccagcgca cactcgcctg
     4981 ttgccagtag cgctcgaagg tctgtctgag cgcgtcggcc gggagatttg cctgctcacc
     5041 cacgggggtc agggcaatcg tggtcgaggt ggcgtcgaag tcgcccaggt ccgccgcgcc
     5101 gggaaggtat tcgatccgtt tctcggccct cacccgttcc agcgacgcca gcagatcacg
     5161 gcggaactca tcccgcatgg ctccgagccg ggcggctttc tcgtcgtggt gcagcacgag
     5221 agccatcgcg gccgcgtcct tgagcccgcg cagcgcgaag aaatcatccc agtacgaatg
     5281 catcggcttg gctgagtatc cctcgtgact gatcgagggc ggcagcagtc cccagaacac
     5341 ccgcttggcc gagtcctgat actccggagt gcgatgggtc tgccgcagcg aatcgatgta
     5401 accggcggcc ttgagcaccc tgggccacat cgacgcgagc agggtggtat cgccggtgtg
     5461 gcgccagtac tccatcacca ggtagatgaa ctcgccgtgg ctgtcatgct ccggcaccgg
     5521 gtcggcgccg cgccggtcga cgcagcaggg caccttgccg tcggcataga gatgggccgc
     5581 gtaccaccgg atgaagtccc gcaccatctc cggatgtccg aagcgaagca gcgccgccga
     5641 cgtcagcgac ccgtcccgga tccaggagcg ctcgtaggag cgcgagccgg gctggatcga
     5701 ggcctcgtcc cggttgacca tgatccagcc gagggtgctc cggatggtgc gggccaggtg
     5761 atcaccggcc gcgggcaacc tgatcgtggc gcgattgagc gcctcttccc accacccgat
     5821 ggtctcggct tcggcctgat cgaggagccg aagcgagccc ggcgccaggt tggcccggag
     5881 cgaggtagtc agcggaatct cgatcgccgc ggtggcggtg tctcccggag cgagccggaa
     5941 agaccaggcc agcgcgcccg acgcggcgcc gaacccgtcg cgcacgctgg tcgttgccgg
     6001 caggcggccg tcccgcaggt gggagacgat ttcgccgccg tcataggtcg tagccgccac
     6061 ctgtgccgga gcggtgaacg gaatgaccag ccggtcgcca ttcaccttga gtctctggcc
     6121 gccccactcc agcgactcga tcttcgcggc cccgcccggc gtgttgagaa actgccaggg
     6181 gggattcacc tggaagggac ggaccgcgag gtagagcgtc ggcgcgcgcg ccgtgggcga
     6241 ggtgttgcgg actcgatacc gcgccaccac cgatgagctc gacgccggtc cgatcgcaaa
     6301 ggcgctgacc gtgagctcga ggccgggcag ggtccaggtc accgaaggaa gggggagatc
     6361 tccttctgcg agcgcggttt tggtcctggc atcggcccag gagtagagcc gccccgagtc
     6421 ggccagaaac ggttcgaccg agaagagtcc cttgcccgcc tcgatcgccc catcctcgtt
     6481 gatcagcgct tcttcccggg ccgagtcgag tcccacgacc gtccagtagg cccgccgccc
     6541 gctgaagtag cgtggatagg tgccctgcgg cgcgcctttg ctgaccgtgg tccagaaggc
     6601 gttgagcgat tctcccacct cgaccgggag aagggtgatc tccctgagtc cgtaaccggt
     6661 ctccccctcg ggccggagca tctgcagccg gaggtagcgc ccttccttgt tggggaggaa
     6721 gaggtcgtcc cggccgccat tgccgccccg gaccttcctg atcacctccc acgccgcgcc
     6781 ggtcccgctc aggagcacgt tgtagtcccg cgcaccgttc ccctcgagcc aggcgaggga
     6841 aatcccgccg aattcccgcg gctctccgaa gtcgaccgtc aggtcaaccg gcttggcggc
     6901 cgcgcgccac gcggtggtgc tgtccccatc cacggcgttt cccgccccgt agcgcgggag
     6961 cgccgcagtg gctcgcgcca ccggcgcccg ggtgttgcgg ccgggcgggg gtagcggggt
     7021 gagcaccaga tcgtcgaacc agacactccc ccgtcccccg ccctggccag cagtgaccac
     7081 cagctccagt gccgccgcgt gggagagctc accaccgccc agcgggcccc acgcgaacga
     7141 gatctgacgc cggcgaatgg tgacccgctg ccactcgccg ctgaacggcc ggtcccgctc
     7201 ggtgtaccac cagacgttct cgccgctccc gtcgatcagc ttgaactcga gcgtgttgac
     7261 cagggccctg ccccggatcc agaacgagag ggcgtagttg ggcggcaggt cgagcggcag
     7321 ggtgcgccgc gcgatggcgt agcccccacc accctggaag tcgaagtcga gccgcaaccc
     7381 tcgtccggtg tgcccccggt cgctgtggac ggaggccttg accccgtccg cggggtgggc
     7441 gctccacagt ctcgcatcct cgaacccgtc caccagccgc ggaccggtcg agtcgcgctg
     7501 cgccagcagc gaggcgagca gcaggaccgg cacgatcatc ccttcacgct gcccgtcatg
     7561 atgccctgga tgtagtagcg ctggaggaac aggaaggcga tgaagaccgg cagcaccgtg
     7621 accaccgcgc cacccatcat gagctccacg tcgagcacgt gctcgccggc gagattggcc
     7681 agggccacgg gcagggtgta gcgggcatcg tcgctcagga cgatgagcgg ccacatgaaa
     7741 tcgttccagg cgctcaggaa ggtgaagaca ccgagcgttg cgaggaccgg ggcgatcgac
     7801 gggagaacga cggtgcggaa gatgaggaac tctcccgcgc cgtcgatccg cgcggcgtcc
     7861 agcaggtcgt cggggatggt ctgggcgtac tgccgcacca ggaagatcgc gtagatcggc
     7921 gccagaaccg gtatcatcgc cccgaagagg gtgttgatca ggcccatctc gcggagcagg
     7981 aggaacatcg ggagcatcgc gacctgcccc ggaatcacca tcccggccag caacgccttg
     8041 aacaccggct gccgcccggg gaagcggagc ttggcaaagg cgtatcccgc catggccgtg
     8101 atgaacacgc ccatcaacgt gccaccgacc gcgatgatca ggctgttgag caggtaccgg
     8161 cccaggctga gcgaggtgaa cagcgcccgg tagtgttcca gcgtcggctg gcttggcagg
     8221 agcggcgggg gcgaggtgtt cgcctcgccg gtgcgcatca gcgaggccga caccatccac
     8281 aggagcgggg ccgccgccag aaaggccgcg gcgagcagca tcaggtgcag cagcagcgag
     8341 cggacccggg cgttcacagc ggctcgttcc gcagccggag ctggagcagc gtgccggcca
     8401 gggtgaggag gaagaggacc accgcgatgg ccgccgcgat gccgagccgc caccagcgga
     8461 acccttcctc gtacatgaac agcaccaggg tggtggtgct cttgagcgga ccgccctgcg
     8521 tcatgacgta cggttcgctg aagatctgga aggcggcgat catcgtcacc acccccacga
     8581 agacgaacgt cgggcccagc atggggacgg tgacgtgccg gaaccgctgc catccgcccg
     8641 cgccgtcgag ctgcgccgcc tcgtacagct cctccggaat gctctgcagc cccgcgagga
     8701 agaccagcat gttgtagccg aagttcttcc agaccgagag caggatgatc gccggcatgc
     8761 tccacgccgg gctgccaagc cagtcgatcg gcccgatgcc gaagacgccg agcagggcgt
     8821 tgatcggccc gtagtggggg tgatacaggt agcgccacac cagcgccacc gcgaccaggg
     8881 tggtgaccca cggcgcgaag aaggcagccc ggaagaaggg cttcccgcgc accagcttcg
     8941 agtgcaccag cagggccgcc accagcgacg tcagcgccga gagcggcccg ccgaccacca
     9001 cgaagtagag cgtgttcttg agcgcggtcc agaagagcgg gttggccagg agctcagtgt
     9061 agttccggag ccccacgaag cgggtactcg ccgggtcgcc gatcgagtag atgtcgaagt
     9121 cggtgaagga gaggagaaat gcgcccagca ccgggatggc gaagaagatc ccgatgagca
     9181 ggagccccgg cgccacgaag gcccacccgg cccgcgcctc cgcccgtgcc gtgaccgaac
     9241 tcactggcgc tccacccggc ggcgggcgag gagaaagcgc cgccgttcca gcagccggtc
     9301 cacctgggcg tccagggtgc tgagggctgc ttccggcgac gtcccgcccc tcaccgcggc
     9361 ctcggtctgg tccatgagct tggtggtgac cagctcccac tccgggatca tcggcgtggg
     9421 caccgcacgc gcaagctgaa cccggaatgc ctgtgcctcg ctgtcggagg cgagcgccgg
     9481 atcactccag gcctcccgcc gcgcggggag gtcgccggtg agccgataga acctgatctg
     9541 ctgctccggc cgcgcgagat actcgatcag gtcccaggcc agcttctggt tgggagaatt
     9601 gcggaagatc acgaggctcg agccgcccgc cagcgacacg cccgaatcgg gcccgcccgg
     9661 accgggcaac gccgccgtgc cccacgcatg cttgagctcg gccggaaggc ggcggcgaaa
     9721 ctcgcccaga ttccacgggc cggtgatgta catcgcgaag gtgccgcggc tgaactcctg
     9781 gtagaggttc gcgatctcgt tgccgcgcac cggcggcgcc aggctgtcgc ggtagagcgc
     9841 caggagaaag tcgaacgcgc gggcaaaggc cggctgccgg aagacgccgt atcccgagtc
     9901 gcttaccagc ggcgagccct gctgcagccc gaggatggcc tgtggcggcc actcgttcat
     9961 tggcaggaag atggcgtact tgcccgggcc acccagccgc cggatcgccc gcatggccgc
    10021 gagccagccg gtccagtctt tcggcatttc ccggtagccg gcctgcgcca gcaggtcctt
    10081 tctatagaag aggacccggg tgtcgacata ccacggaatc ccgtagaggg cgccgtccac
    10141 cacgttggtg gcccagatcc cgggatagtt gttcgcctcg gacaccgtcg agccggcctg
    10201 gagatgctgg agcggctcca gcgccccaag cgtcaccatc tcgggaatcc aggtgttgcc
    10261 gagctgcgcg atgtcgggtg tcgcccggcc gacgtgcgcg gtgagaagct tctcgtgcgc
    10321 cgcggtccag ggaatctgct ggacccgcac ccggacgccg gggtgctccg cctcgaagcc
    10381 ccgcaccagc tcctgcacca cttcgccctc gcggccgaag gcccagaacc ggagcgtggt
    10441 gccctccgtg gcggccgacc ggcagccggc cccgagcagg cagagcaggg caccccgcca
    10501 gctcaatgtc atggggcccg gtccagccac ccgccgcgga atcccgcccg gcgcagaccg
    10561 cggatcaggt agggactggc ccgcatgtgc ttccacacca ggtcggagcg gtaattcgcg
    10621 atcatggcga tgatcggacc ctggtcgatg ccgaggtagt cggtgtcgaa ccagcccttg
    10681 cccgcgacca ccttgcccgc ggtggcctgg ccgctgtagc ggaacgaggg attgaaggcg
    10741 tcgaggaaac cgtactggcc gaacagatcg tcgccatagc gttcccgcat cgcgaccagt
    10801 gccgggagca cgatctccgg cgcgaacgcc agggaaccgg cggcggccgt cggggcgatg
    10861 gtaccgtcgt cccgcacttc attgaacgag gcgccccgcg cggcataggt gaagaagcgg
    10921 cggctcgcac cgttgaagtc gagggtgacg tcggcggggc cgtcgctggc cgaaaggccc
    10981 cagatgttgg ccccgtagtc gatccagccc atcgggttcg ccaccgcgta gctccgctgt
    11041 gccagcgtgg cccggcggct gttctcgaag tagtcgatcc ccttgccctg catgtaggga
    11101 tcctggattc cgcggaagtc gacccagacg tgggtgtagt gatgtccgaa gaggggcgcg
    11161 aagccgaggt gggactggcc gcggaaggtg ccccatgtgt aggtgttgct ccacgcggcc
    11221 caggcggtgg agtcgatggt gtgggtcggc gagccgaggg cgagcagata caccagcatc
    11281 gcctcgttgt agcccatcca gtcgagcggc tgccacccgc cgttcgggtc ctccggtttc
    11341 caccccatgt tgatgcgggg tggggtgcgc tgggcccagg tccagttcac ccggcggtag
    11401 agcgagtcgg cggtggcccg gatgcccgtc tcggtcacgt cggtgccgtc gtagtactcc
    11461 cggcagaaga gcacgcccat catgaggagc ccggtgtcga cggtggagag ctccacgtcg
    11521 cggaagcggg cgcctccggg cattgtcagg aagtgataga agaagccctg gtagccggcg
    11581 gtccccgacg gatcggggcc ctgtggcgcc tgccagaacc agcgcagcgt ggccagggtg
    11641 cgttccgccg cctgggtccg ggtgatgtag ccccgctcgg cgccgaccgg gtaggcggtg
    11701 agcgcgaagc ccaccgcggc gatgctggaa aaggtctcgt tgggccagcg gtcaggggtg
    11761 aggccggtgg ccgggtcgct tcgttcccag aagaaatcga aggtcctctg ttcgagggtg
    11821 tcgagcagcg cctgggcccg gggaccatct gcgggagggg ctgccggcgg gctgtacgcg
    11881 ctggtgcagg cgatgcagag gagcagcagc ggcagcaatc ggctggcggg ggagaggcgc
    11941 attggcgagc ggtgctgccg gccgcaggca cccgtgagga tgcctgcggc cttgggggtc
    12001 agaaggtgta ttcc
//
LOCUS       DATIFF010000865         1744 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1031499, whole genome shotgun sequence.
ACCESSION   DATIFF010000865 DATIFF010000000
VERSION     DATIFF010000865.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1744
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1031499"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..908
                     /locus_tag="VLD58_12690"
     CDS             <1..908
                     /locus_tag="VLD58_12690"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HSB55212.1"
                     /translation="EGFLASANQQPIDPRVDPRYLGANWYPPWRAMRINQLLRADSAA
                     TPDDMRRWQTDPGSPAADILVPAFLTAAARYPGRDSLQQAAALLAQWDRRYTRENTRA
                     VLYDAAVRALQELLWDELRPGRDLGPPSLAITVTLLSDPANPWWDNHASAAVEDRDAI
                     LAEALERALRETITRYGAPDAGGWRWARVRQANIYHLLGIRGLSALGIPVQGGPSTLN
                     PSSGWGGFGPSWRMVVQLGPEVHGWGTYPGGQSGNPASSRYTDRLDAWRDGTLDSLRF
                     PRTAAALQGRVLSDLTLEPQERTPR"
     gene            905..1276
                     /locus_tag="VLD58_12695"
     CDS             905..1276
                     /locus_tag="VLD58_12695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55213.1"
                     /translation="MTAAVVLFLAMGLATWAAGWWGVLLAGALWGLLRRRPSVAGLAA
                     GAAWLSLFALDGPIGAFRRLAARLGGILGVPGWALILVTLLYPILLAWSAARLSRALR
                     PAQGKRAPDPFRAGAESEARG"
     gene            complement(1273..1671)
                     /locus_tag="VLD58_12700"
     CDS             complement(1273..1671)
                     /locus_tag="VLD58_12700"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSB55214.1"
                     /translation="MPTTFQKLAPVLLVPEIAPCLPFWTERLGFQQVAEVPGPDGAAQ
                     FSMLIKDGVEVMYQTWASVERESPEAARGARGHSIALYIDVADLDEVDRALAGIPRVA
                     DRKRTFYGTEEFTVREPAGNPVTFAMRVED"
BASE COUNT          253 a          617 c          600 g          274 t
ORIGIN      
        1 tggagggatt cctcgcctcc gccaaccagc agccgatcga cccgagggtg gatccgcgct
       61 atctcggcgc gaactggtac ccaccctggc gggcgatgcg gatcaaccag ctgctccggg
      121 ccgactccgc agccactccc gatgacatgc gccgctggca gaccgaccct ggcagccccg
      181 cggcggatat ccttgtgccg gctttcctga cggcagccgc gcgctacccc gggcgagact
      241 cgctgcagca ggccgcggcg ctgttggccc aatgggatcg tcgctatacc cgcgagaaca
      301 cccgcgccgt gctgtacgac gccgccgtcc gcgcgcttca ggaactcctg tgggacgagc
      361 tccggcccgg ccgcgacctc ggacctccca gcctggcgat caccgtcact ctgttgagcg
      421 acccggcgaa tccctggtgg gacaatcacg cctcggccgc ggtggaagac cgggacgcga
      481 tcctggccga agcactggag cgggcgctgc gggaaacgat cacgcgctat ggcgcccccg
      541 atgcgggagg gtggcgctgg gcccgggtgc ggcaggcgaa catctaccac ctccttggca
      601 tacgaggcct ctccgccctt ggcatcccgg tccagggcgg gccgtccacg ctgaaccctt
      661 caagtggttg gggcggcttc ggcccgagct ggagaatggt cgttcagctc gggcctgagg
      721 ttcacgggtg gggcacttac ccgggtgggc agtccggaaa cccggccagc tccaggtata
      781 ccgaccggct ggacgcctgg cgagacggca cgctcgactc gctgcgcttc ccccggaccg
      841 cggcggcgct tcagggaagg gtgttgagcg atctcaccct ggagccgcag gagcggacgc
      901 cacgatgacc gcggccgtgg tgctgttcct tgcgatgggc ctcgccacct gggccgcggg
      961 atggtggggt gtgctcctgg ccggcgcgct ctggggcctg ctgcgtcgcc ggccgtccgt
     1021 cgccgggctc gcggcgggcg cggcatggct cagcctcttc gctctcgatg ggccgatcgg
     1081 ggcgttccgg agacttgccg cgcggctggg cggcatcctc ggcgtccccg gatgggccct
     1141 gatcctcgtg accctgctgt accccatcct gctggcatgg agcgcggccc gcctcagccg
     1201 ggctctccgc cccgcgcagg ggaagagagc gcccgatcca tttcgagcag gggctgagtc
     1261 cgaggcacgg ggctagtcct caacccgcat cgcgaaggtc accgggttcc cggccggctc
     1321 gcgcaccgtg aactcctcgg tgccgtagaa tgtccgcttc cggtcggcca cgcgcgggat
     1381 gcccgccaga gcgcggtcca cctcgtcgag atccgccaca tcgatgtaga gggcgatcga
     1441 atggccacgc gcgccacgcg cggcctccgg agactcccgc tccacactcg cccaggtctg
     1501 atacatcact tccacaccgt ccttgatcag catcgagaac tgggcggctc cgtccgggcc
     1561 tggcacctcg gccacctgct ggaagcccag gcgctcggtc cagaacggaa ggcagggggc
     1621 tatttcgggc accagcagga caggggcgag cttctggaac gtggttggca cggcggcctc
     1681 ctgtgagggg cggcctcgag gcgccgccgg ttagtctaat taagactaca tgaatagtat
     1741 caat
//
LOCUS       DATIFF010000866         1024 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1492821, whole genome shotgun sequence.
ACCESSION   DATIFF010000866 DATIFF010000000
VERSION     DATIFF010000866.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1492821"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..836
                     /locus_tag="VLD58_12705"
     CDS             <1..836
                     /locus_tag="VLD58_12705"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HSB55215.1"
                     /translation="RVRTPLGARQGARFTGWVTPSLILVCLIAYGFQGFPVNGLSQSS
                     TNLFTFRFQLLGLGAIQDQGSVQLVGLATGDEYYRLITAAFLHVGIVHIAFNMIALYV
                     LGTPVERIFGWPRYLALWVTCAVGGNTLVYLVDGLDANGVGASTAIFGLFAAYFLMAR
                     RVGADTTQIVILIVINLVLSFLPGFNISWLGHLGGLGTGVVLGAVFVYVKDRRGWIHL
                     PVALALCGAFVLGAVVKTEAIGLDASRIQRIVGAGPIAGPIAGPVPPASTVPGVTSPH
                     P"
BASE COUNT          140 a          375 c          334 g          175 t
ORIGIN      
        1 gccgggtcag gaccccgctc ggggcgcggc aaggggcccg cttcaccggc tgggtgacgc
       61 cctcgctcat cctggtgtgc ctgatcgcct acgggttcca gggcttcccg gtcaacgggc
      121 tcagccagag cagcaccaac ctgttcacct tccgattcca gctgctgggc ttaggcgcca
      181 ttcaggacca aggaagcgtc cagctggtcg ggctggcgac cggcgacgag tattaccggc
      241 tgatcaccgc ggcattcctg cacgtcggca tcgtgcacat cgcgttcaac atgatcgccc
      301 tttacgtgct cggcactccg gtggagcgga tcttcggctg gccccggtat ctcgcgctct
      361 gggtgacctg cgcggtcggc gggaacactc tcgtgtacct ggtggacggc ctggacgcca
      421 acggggtcgg cgcctccacc gcgatcttcg ggctgttcgc cgcctacttc ctgatggccc
      481 ggcgggtggg tgcggacacg acgcagatcg tcatactcat tgtgatcaac ctcgtgctct
      541 cgttcctgcc cgggttcaac atcagctggt tggggcacct gggcgggctg ggcaccggag
      601 tcgtgctggg cgccgtattc gtctacgtca aggaccgccg cggctggatc cacctcccgg
      661 tcgcgctcgc cctgtgcggc gcgttcgtcc tcggcgcggt ggtgaagacc gaagccatcg
      721 gcctggacgc gtcacgcatc cagcgcatcg tcggcgccgg cccgatcgcc ggcccgatcg
      781 ccggccccgt ccccccagcg agcaccgttc ccggcgtgac cagcccgcac ccgtagccgc
      841 tccagacctt ccgcgaccgt gcgcgggtcg gcgccaagca tgcgccggga caagacgaca
      901 agatggcccc gctggccgcc cttcccatcc gggacgacga cgtcgagttc caggctgcgc
      961 agcccgacca gtccgcgccg gttgaccgac cgggcggata tgcgccgcac gtccctccac
     1021 ggca
//
LOCUS       DATIFF010000867         1215 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_875534, whole genome shotgun sequence.
ACCESSION   DATIFF010000867 DATIFF010000000
VERSION     DATIFF010000867.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_875534"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            153..>1215
                     /locus_tag="VLD58_12710"
     CDS             153..>1215
                     /locus_tag="VLD58_12710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HSB55216.1"
                     /translation="MIDDHYRSPLGTRYASPAMQRLWGERHRIGLWRRVWLALAETER
                     ELGLPIPDEALAQMRAHLDDADLAAAAEYERRFRHDVMAHVHQFGDQAPAARPFLHLG
                     ATSAFVTDNADVLVMREGLRLLLGRLLGTLDALGTFARRHAGMPCLAYTHFQPAQLTT
                     VGKRATLWMQDLALDVEELVHRLETIRLRGCKGTTGTQASFLELFKGDHAKVRQLERR
                     IAERLGVPRVYPVTGQTYSRKGDSVVLDVLSGIAQSSAKMATDLRLLQHEGELLEPFE
                     TEQIGSSAMAYKRNPMRAERICGLARFVIGLAANTANTAATQWLERTLDDSANRRLTL
                     PEGFLATDAILVLAENISRG"
BASE COUNT          194 a          412 c          438 g          171 t
ORIGIN      
        1 cgcaccgggg acgtcatcgt gggtatgaac cggcggccga tcacctcggc cgatgacgta
       61 cgggaggtgg tcgaaggcct ccgggcgcgg caaccggtgc gggtcttcat cgaacgggag
      121 ggcagcctgg tctacaccga cctcgagttc cgatgatcga cgaccactac cgctccccgc
      181 tgggcacccg ctatgcctcg ccggccatgc agcggctctg gggcgagcgg caccggatcg
      241 ggctgtggcg ccgggtgtgg ctggcgctgg ccgaaaccga gcgggaactg ggcctcccga
      301 tcccggacga ggcgctggcc cagatgcggg cgcatctgga cgatgcggat ctggccgccg
      361 cggcggaata cgagcggcgc ttccgccacg atgtcatggc ccatgtgcac cagttcgggg
      421 atcaggcccc ggcggcgcga cccttcctgc acctgggcgc caccagcgcc ttcgtgaccg
      481 acaacgcgga cgtgctggtg atgcgcgagg ggttgcggct gctgctggga cggctgctcg
      541 gcaccctcga cgcgctgggg acgttcgccc ggcggcacgc cgggatgccg tgcctggcct
      601 acacccactt ccagccggcc cagctcacca cggttggcaa gcgggcgaca ctgtggatgc
      661 aggacctggc gctggacgtg gaagagctgg tgcaccggct ggagacgatc cggctgcgcg
      721 gctgcaaggg aacgaccggg acgcaggcca gcttcctcga gctgttcaag ggggatcacg
      781 ccaaggtgcg ccaactggag cggcgcatcg cggagcggct gggcgtaccg cgggtctacc
      841 cggtcaccgg acagacctac agtcgcaaag gcgacagcgt ggtgctggac gtcctctcgg
      901 ggatcgccca gtcatcggcc aagatggcga ccgacctgcg gctgctgcag cacgagggcg
      961 aactgctcga gccgttcgag acggagcaga tcgggtcgag cgcgatggcc tacaagcgca
     1021 acccgatgcg cgcggagcgg atctgcggcc tggcgcgatt cgtcatcggc ctcgccgcca
     1081 acactgccaa taccgccgcc actcaatggc tggagcgcac cctggacgac tcggccaacc
     1141 gccggctcac cctgccggag gggttcctcg ctaccgacgc gatcctggtg ctggccgaga
     1201 acatctcgcg gggac
//
LOCUS       DATIFF010000868         4575 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_722919, whole genome shotgun sequence.
ACCESSION   DATIFF010000868 DATIFF010000000
VERSION     DATIFF010000868.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4575
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_722919"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..832)
                     /locus_tag="VLD58_12715"
     CDS             complement(<1..832)
                     /locus_tag="VLD58_12715"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSB55217.1"
                     /translation="MLTVGCAPSLPGPSGARPIAVRPDTLWSPPAQRARPELPAPEAR
                     RDLPPEIAARRAALTLEDVIALALEGSPSARESWANARSQAATYGATRGAWFPTVQGT
                     GTVTRLKTAAILGRNAVTQTVYQPSASFTYLLLDLGGRSGQVRAAREALVAANWTHNS
                     TLQNVVATAAAAYFDYTAAKALLSAQRAVVAQADTNLAAAEERRRVGVATIADVLQAR
                     TALAQARLDLQTVEGNLLTTRGALAVATGFPANLEYDVDTTIVERDLSVVTDSVEALI
                     A"
     gene            complement(986..3997)
                     /locus_tag="VLD58_12720"
     CDS             complement(986..3997)
                     /locus_tag="VLD58_12720"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSB55218.1"
                     /translation="MISWAAERPAVIWASAVALVLAGALALARLPVATKPYVELPRLT
                     VSMNWPGASAELVETYLGSPIEAAIQSVRGIRKITSESGESYLSLDIELEPGTDVRLS
                     RLGILERLELLRPDFPAGSGDLQVSNYVPEGLDEEPLLSATLYGPYTAGTLEDLVERQ
                     IKPRLNAVPGVAGVSSMGGALVGVAVAYQPERLRQLGIEPSALSEALARAREVQAIGV
                     ERGGATERQVVLRDTPEALEQLGELPVRGAGSRVHRLADLATIRMEEDNQDRFFRVNG
                     EPAVMMRIARLPGADAIRTARDVRAVLDELRPALPAGIRFQVLSDESIRLGEQLGDLG
                     RRGAIAFAGVLLVLAIALRAPRAVILVLTSAAVAVAGTTLGLYLLNIPANLLTLAGLG
                     MGVGILVQNGLIVVDRLRTAPDTVEGRADAGRRITPAVLGSTLTTAVVLFPFLYLQGD
                     ARAAFMPFAAAFSMALGWSVVTSVVMIPALGKGHGVHEVRWPRLRRWYLRVAITMLRW
                     RWVTIGATTVMLAGLSYVFAVKVPRSSFAGWWNQRTTLSARVDFPSGSDPGSIDQSVK
                     ELERIVVGREGVENVQAQGTANGGYVIVTFDDAAAYTAIPLAMQEELTQRAVLIGGAA
                     VSVSGRGPGFYNGAGVGSSANFRVKILGYSFAGVEQLAIDLKQRLERIPRVKSVDINA
                     AGFWFGQERASDVTLVPNRALLAGYGLDATQFAQAVSREVGGAAGRQRFSLGDKEVWL
                     SLKTEGARARTLDQLREARVPNPRNIPVRVGDLATVEERAALARISRENQQYVRVLSY
                     EFRGPQKLANRTHEAFMKSISVPAGYTVSDEYFGWQDDESQKGLWLVFAIGLVLVVLT
                     VAMVFDSVWGAAMVFLSLPIALGGVIAAFWIAKEAFTREAAVGVILVIGLAVNQSILL
                     VDGVLQRSKATQGGRSAVSPRTVIAACRDRVGMIVLITLTTLASPLPLAVGTEAQDLF
                     GAIALALVGGTVAGTIGALFLVPPLLLRRTS"
     gene            complement(3994..>4575)
                     /locus_tag="VLD58_12725"
     CDS             complement(3994..>4575)
                     /locus_tag="VLD58_12725"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSB55219.1"
                     /translation="GADTEQRRTLSEMGVVAVLSVLLMFLVLAGEFASFSTPLLVMLT
                     VPLAGVGGVVVLWLTGQSLNAVSLIGMVVMIGLADNDAVVKLDAIRRFREEGHPIREA
                     VLLGGRQRLRAIAMTSLTTIVGVLPLVFGWGSGGELYQPLAAGVIGGSVTATLVTFFL
                     LPTAYSVVEHRAERRAAVRQQLAEPGALGETTG"
BASE COUNT          765 a         1598 c         1559 g          653 t
ORIGIN      
        1 ctgcaatcag cgcttcgaca ctatcggtga ctaccgagag atcccgctcc acgatcgtgg
       61 tatcgacatc gtactccagg ttggccggaa acccggtcgc caccgcgagc gcaccgcggg
      121 tggtgaggag attcccttcg acggtctgga gatcgagacg cgcctgcgcc agcgcggtgc
      181 gcgcctggag cacatcggcg atggtggcga ccccgacccg ccggcgctcc tccgccgcgg
      241 cgaggttggt atcggcctgc gccaccaccg cgcgctgggc cgagagcagc gccttggccg
      301 cggtgtaatc gaagtaggcc gccgccgcgg tggcgacgac attctgcagc gtgctgttgt
      361 gggtccagtt ggccgcaacc agcgcttcgc gggccgcccg gacctgaccg ctccgcccac
      421 ccagatccag gagcaggtag gtgaatgacg cgctcggctg gtatacggtc tgggttaccg
      481 cattgcggcc caggatcgcg gcggtcttga gccgggtgac ggtcccggtg ccctggacgg
      541 tggggaacca tgccccccgg gtcgcgccgt acgtggcggc ctgcgaccgc gcattggccc
      601 agctctcccg cgcgctcgga cttccctcca gcgccagcgc tatcacatcc tcgagggtca
      661 gcgccgcacg ccgggccgcg atctcaggcg gcaggtcgcg ccgcgcctcg ggcgccggca
      721 gttccggccg ggcgcgttgg gccggcgggc tccagagtgt atcgggacgg actgcaatcg
      781 gacgggcacc ggagggacca ggcagggacg gagcgcatcc cacggtcagc atgagcagca
      841 atccagtggc acggcaggaa ccgttaagac gagacatatg cactctttac gtggattgcc
      901 ggcggaacgt tgacaacgta gccgctccgc cggagaggcg cgaattgtaa cgcgggaggg
      961 cttgttcgac cttggaggtc gggaactagc tcgtgcggcg gaggagcagc ggcgggacga
     1021 ggaagagggc gccgatggtg ccggcgacag tgccgcccac cagcgcgaga gcgatggccc
     1081 cgaagagatc ctgcgcctcg gtgccgactg cgagaggaag gggactggcc agggttgtaa
     1141 gggtgatgag aacgatcatg ccgacccggt cccggcacgc cgcgataacg gttctgggac
     1201 tgaccgccga gcggccgcct tgggtggctt tgctccgctg gagcactcca tcgaccagga
     1261 gaatcgactg attgacggca agcccgatca ccagaatcac gccgaccgcc gcctcccggg
     1321 tgaaggcctc cttggcgatc cagaacgccg cgatcactcc cccgagcgcg atcggcaggc
     1381 tcaggaagac catcgccgcg ccccacaccg agtcgaacac catcgccacc gtgagcacca
     1441 ccagcaccag tccgatggca aagaccagcc agaggccctt ctggctttcg tcatcctgcc
     1501 agccgaagta ctcgtcgctg acggtgtacc ctgccggcac cgaaatcgac ttcatgaatg
     1561 cttcgtgggt gcggttggcg agcttctggg gaccacggaa ctcgtagctc agcactcgca
     1621 catactgctg gttctcccgg ctgatccggg ccagggcagc gcgttcctcc acggtggcga
     1681 ggtcgcccac ccgtaccggg atgttgcgcg gattggggac ccgcgcttcc cgcagctggt
     1741 cgagggtgcg ggcccgggcg ccttcggtct tgagcgagag ccacacctcc ttgtctccca
     1801 gcgagaagcg ctgccgtccc gccgctcccc ccacttcccg ggacaccgcc tgtgcgaact
     1861 gggtggcatc gaggccatag ccggccagga gggcccggtt cggcaccagg gtgacatcgc
     1921 tggcccgctc ctgcccgaac cagaatccag cggcgttgat atcgaccgac ttcacccggg
     1981 gaatccgctc cagccgctgc ttgagatcga tggcgagctg ctccacgccg gcgaacgaat
     2041 atcccaggat cttcaccctg aagtttgccg agctgccgac cccggctccg ttgtagaagc
     2101 ctggcccccg gccgctcacg ctcaccgccg cgccgccgat gagcaccgcg cgctgggtga
     2161 gttcctcctg catcgcgagc ggaatggcgg tgtaggcggc ggcgtcatcg aaggtgacaa
     2221 tgacataccc gccgttggcg gtaccctgcg cctgcacatt ctccacgccc tcgcgtccca
     2281 ccacgattcg ctcgagctcc ttgacgctct gatcgatgct gcccggatcc gagccgctgg
     2341 gaaaatcgac ccgggccgag agggtggtgc gctggttcca ccacccggca aaactcgagc
     2401 ggggcacctt caccgcaaag acatagctca ggccggcaag catcaccgtg gttgcgccga
     2461 tcgtgaccca gcgccaccgt agcatcgtga tcgccacccg caggtaccag cgccgcagcc
     2521 ggggccagcg gacctcgtgc acgccgtggc ctttgccaag cgccgggatc atcaccaccg
     2581 aggtgacaac cgaccaaccg agggccatgc tgaacgccgc ggcgaacggc atgaacgccg
     2641 ctcgcgcgtc gccctggaga tagaggaagg gaaagagcac caccgcggtg gtgagagtcg
     2701 agccgagcac cgccggcgtg atccgccgcc cggcatccgc ccgtccttcg accgtatccg
     2761 gcgcggtccg gagccggtcg accacgatca gcccgttctg caccaggatc cccacgccca
     2821 tgccgagtcc ggcgagggtc aggaggttgg caggaatatt gaggaggtag agcccgagcg
     2881 tggtgcctgc aacggcgact gcggcactgg tgagcaccag gatgacggcg cggggcgccc
     2941 ggagggcgat cgcgagaacc agcagcaccc cggcaaaggc gatcgccccc cgccggccca
     3001 gatcgccgag ttgctcgccc aggcggatgc tctcatcgct cagcacctgg aagcggattc
     3061 ccgccggcag cgccgggcgg agctcgtcga gcacggcccg cacgtcacgc gcggtgcgga
     3121 tggcatcggc gccgggcagc cgggcgatgc gcatcatgac cgcgggttcg ccattcacgc
     3181 ggaagaaccg gtcctggttg tcctcctcca tgcggatcgt ggcgagatcg gccagccggt
     3241 gcacccgcga accggcgccc cgcaccggga gctcgcccag ctgctccagc gcctcgggtg
     3301 tgtcccgcaa taccacctgc cgctcggtgg ccccgccccg ctccaccccg atggcttgca
     3361 cctcgcgcgc gcgggccagt gcctcactca gcgccgaggg ctcgatgccg agctgccgga
     3421 gccgctcggg ctggtaggcc accgccacgc ccaccagtgc gccgcccatc gagctgaccc
     3481 cggcaacccc gggcactgcg ttgagccgcg gcttgatctg gcgctccacc aggtcctcga
     3541 gcgtgccggc ggtatacggt ccgtacaggg tggcgctgag gagtggttcc tcgtccagtc
     3601 cttcggggac gtagttgctg acctggaggt cgccggaacc ggcggggaag tcggggcgca
     3661 gcagctcgag ccgctcgagg atgccgaggc gcgaaagccg gacatcggtg ccgggctcca
     3721 gctcgatgtc aagcgagaga tagctctccc ccgattcgct ggtgatcttg cggatgccgc
     3781 ggaccgactg gatcgcggcc tcgatcggac tgccgagata ggtctccacc agctcggccg
     3841 aggcgccggg ccagttcatc gagacggtga ggcggggaag ctcgacgtag ggcttggtgg
     3901 cgaccggcag ccgggccagc gcgagagcgc cggccaggac cagggcgacg gcgctggccc
     3961 agatgacggc tggacgctca gcggcccagg agatcatccg gtggtctcgc ccagcgcgcc
     4021 cggctccgcg agctgctgac gcaccgccgc gcgccgctcg gcccgatgtt ctaccactga
     4081 atacgccgtg ggcaggagga agaaggtcac cagcgtagcc gtgaccgatc cgccgatgac
     4141 tccggccgcg agcggttgat acagctcgcc gccactgccc cacccgaaga cgaggggcag
     4201 cacgccgacg atggtcgtga gcgatgtcat cgcgatggcg cggagccgct gccgcccgcc
     4261 caggagcacc gcctcgcgga tggggtggcc ctcttcgcgg aagcggcgga tcgcgtccag
     4321 tttcaccacc gcatcgttgt cggccaggcc gatcatcacg accatgccga tcagcgagac
     4381 cgcgttgagg ctctggccgg taagccagag caccaccacg ccgccgacac cggcgagcgg
     4441 cacggtcagc atcaccagga gcggggtgct gaaggaggcg aattcaccgg cgagcaccag
     4501 gaacatgagc agcaccgaga gcacggccac cacgcccatc tcggagaggg tgcggcgctg
     4561 ttcggtgtcg gcccc
//
LOCUS       DATIFF010000869         1179 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1493028, whole genome shotgun sequence.
ACCESSION   DATIFF010000869 DATIFF010000000
VERSION     DATIFF010000869.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1493028"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(235..966)
                     /locus_tag="VLD58_12730"
     CDS             complement(235..966)
                     /locus_tag="VLD58_12730"
                     /inference="COORDINATES: protein motif:HMM:NF014619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase family protein"
                     /protein_id="HSB55220.1"
                     /translation="MGDAAVPRLELGEWANRYGLVAGITTRHGGFSLGLWSEEATGAV
                     MTRWRAFRKAFEPRFPTLVLGHQVHGTDVRWHQALPAGWLVLEGVDGHATGQPGVLLA
                     ITVADCIPIYLAAPEKGAIALLHAGWRGVAGGVLEQGVGILSERSGTARRDIVMHCGI
                     GICGNCYEVGYEVAEKLNGRPGAAGQSFVDLRSILAARAGNLGIREVTISTFCTAHHQ
                     ERFFSHRASGGRDGRMVAYLGRPLA"
BASE COUNT          202 a          437 c          360 g          180 t
ORIGIN      
        1 cgcgcgcagt cctccaccgt cacgcgccgc tcggggtccg tcgcgggcca atcaatgcgc
       61 acttggacga gcggccgatt cggcgtgccg cccagacgaa tgtcggccag atcgagcccc
      121 agttcctcga gacgggcccg aaaagcctcc accaaggtgt cggtgagcat aaaaaaaagc
      181 gcgggccgaa cttcgcccgc ttcgaaggtg aatgtagccc cccctccggg ggtgtcaagc
      241 caaaggccgc cccaggtacg ccaccatgcg cccgtccctt ccccctgagg cacggtgtga
      301 gaagaaccgc tcctggtggt gcgcggtgca aaaggttgag atcgtgacct cgcgaatccc
      361 gagattgcca gcgcgagcgg cgaggatgga tcgcaggtcc acgaagctct ggccggccgc
      421 tccggggcga ccgttgagct tctccgcgac ttcataacct acttcataac agttgccaca
      481 aatgcctatg ccacagtgca ttacgatatc cctcctggcg gtcccagaac gctccgacag
      541 gattcccaca ccctgctcca gcacgccacc ggccacaccc cgccacccgg cgtgcaacaa
      601 ggcgatcgca cccttctcgg gagccgccag gtagatcgga atgcagtctg ccaccgtgat
      661 cgcgagcagc actcccggct gcccggtggc atggccgtcc accccttcga gcaccaacca
      721 tcccgctggc agggcttggt gccagcgcac gtcggtgccg tgcacctggt gccccagcac
      781 gagggtcggg aatcgtggct cgaacgcctt gcggaaggcc cgccagcgcg tcatcaccgc
      841 tccggtcgcc tcttcgctcc atagaccgag ggagaagccg ccgtgccgcg tggtgatccc
      901 cgccacgaga ccgtagcggt tggcccattc gcccagctcg agtcgcggga cggccgcatc
      961 acccaccggc ccctcgatca caagtccggc cgccagcggc ccgcgttggg cggctattgc
     1021 gcccggagcc ggctcagtgt ccatcctcgc gccgctcgat ctgggcgccg agcgcccgca
     1081 gccgctcgtc gatgcgctcg tagccgcgct cgatctggcc cacgttgtgg atcaccgaat
     1141 cgccttcggc ggcgagggcg gcgagcagca tcgccatgc
//
LOCUS       DATIFF010000870         2355 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_107929, whole genome shotgun sequence.
ACCESSION   DATIFF010000870 DATIFF010000000
VERSION     DATIFF010000870.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2355
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107929"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(107..1483)
                     /locus_tag="VLD58_12735"
     CDS             complement(107..1483)
                     /locus_tag="VLD58_12735"
                     /inference="COORDINATES: protein motif:HMM:NF039907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HSB55221.1"
                     /translation="MKDRLSDALRAARADYTEIRLERTWASAVAFRGSRLEGATSAVE
                     VGGMVRCLNRGKGWGIATFTGAERLPAMVSQAHELSLALPLDAPIRLADIPIRQGDYF
                     SDLDGDVREISLGEKRALLERLNQEMLAADRRITDTLATYDDRVTERWLANSDGLLLY
                     DLRPEVRLSAGAVAREESFLERAFESWSARGGWRSVQEIDHLFRQAARRALTLLSAPR
                     VRAGTYPVILDPRLAATLVHYTLGHLSEADALGRNPDADSLMRPGNRVGSDLLTVGDD
                     GSASSLTGSLAFDDEGAPTQNTLLVQHGVLVGRLHTRETAARAGVRPTGSARASSFRS
                     VPEARLTNTYLANGRGTLEDLLRGIRYGIYCCDAMGGESHLGRFGITAGWGQVIRDGQ
                     LAEMVKPMVLAGDLAETLQRIDAVAGDFRWSHLASSCSRPESGAISVAEGAPHIRIDG
                     VSVGGETT"
     gene            complement(1485..2003)
                     /locus_tag="VLD58_12740"
     CDS             complement(1485..2003)
                     /locus_tag="VLD58_12740"
                     /inference="COORDINATES: protein motif:HMM:NF012383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HSB55222.1"
                     /translation="MKRPAPQSQPRGVLEIDWPFFGELTRALALKVAREFQPEVVLGI
                     AKAGVIPGVVVASILQVEFASMAVTRRDAGSEPILVAGPPTTIRGRRVLLVDETCDTG
                     STFKLALNEVRSLKPSEVRTAVSFKTGPYKPDFHAFETDNLIILPWDREIIEGDQLVM
                     RPDYVKWIKGNG"
     gene            2120..>2355
                     /locus_tag="VLD58_12745"
     CDS             2120..>2355
                     /locus_tag="VLD58_12745"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSB55223.1"
                     /translation="MGFWRRLFGGDQKNLKPQRLDYLNEALALERQGDYESALTSYRL
                     ALRDNANDPRILQNMAIAFTKTGQLDEAIRHYRRA"
BASE COUNT          378 a          772 c          837 g          368 t
ORIGIN      
        1 gaggccggct tcccggcggt gaagcgcaca ctggtggtct cgtcgctctt ctcggccgca
       61 tcggcgaggg tagtgcgacg ggcggcgagt tcgatgagcg gggcgatcat gtggtctctc
      121 cgcccaccga gaccccatcg atgcgaatgt ggggcgcgcc ctcggccacg gagatggcgc
      181 cgctctcggg ccgggagcag ctgctggcga ggtgggacca gcggaaatct cccgcgaccg
      241 catcgatccg ctggagtgtc tcggcaagat caccggccag gaccatcggc ttcaccatct
      301 cggccagctg gccgtcgcgg atcacctggc cccacccggc ggtgatgccg aagcggccga
      361 gatggctttc gccgcccatc gcgtcgcagc aatagatgcc gtagcggatg ccgcggagga
      421 ggtcctcgag ggtgccgcgg ccgttggcga gataggtgtt ggtgaggcgc gcttcgggca
      481 ccgagcggaa ggaactggcc cgggcgctcc cggtcggacg caccccggcg cgggcagcgg
      541 tctcgcgagt gtgcagccgt cccaccagca cgccgtgctg caccagcagg gtgttctggg
      601 tcggcgcccc ttcatcatcg aacgccagtg agccggtgag gctcgaggcg ctgccgtcgt
      661 ctcccacggt gaggaggtcg gatccgaccc ggttaccggg acgcatcagc gaatcggcat
      721 cgggattccg gcccagcgca tcggcttcgc tcaggtgtcc cagggtgtag tgcaccagcg
      781 tggcggcgag acggggatcg agaatgacgg ggtaggtgcc ggcccgcacc cgtggcgccg
      841 agagcagcgt cagcgcgcgg cgagcggcct ggcggaagag gtggtcgatc tcctgcacgc
      901 tccgccagcc gccccgggcc gaccaggact cgaaggcccg ctcgaggaag ctctcctccc
      961 gcgccacggc gccggcggag agccggacct cggggcggag atcgtagagg aggagtccgt
     1021 cggagttcgc gagccagcgt tcggtgacac gatcgtcgta ggtggcaagg gtgtcggtga
     1081 tgcgccggtc ggcggcaagc atctcctggt tgagccgctc cagcagggcc cgcttctcgc
     1141 ccagggaaat ctcgcgcaca tcgccgtcga gatcggagaa atagtcgccc tggcggatcg
     1201 ggatgtcggc gagccggatg ggcgcatcga gcgggagggc gagcgagagc tcgtgggcct
     1261 gcgacaccat ggccgggagc cgttccgccc cggtgaaggt ggcgatgccc cagcccttgc
     1321 cccggttgag acagcgaacc atcccgccca cctcgacggc gctggtggcg ccctcgagcc
     1381 ggctgccgcg gaaggcgacg gcagacgccc aggtgcgttc gaggcggatt tcggtgtaat
     1441 cggcccgggc cgcgcggagc gcgtcggaca gccggtcctt cacgctaacc gttccccttg
     1501 atccacttca cgtagtcggg gcgcatcacc agctgatcgc cctcgatgat ctcacggtcc
     1561 cagggcagga tgatgagatt gtcggtctcg aaggcgtgga agtcgggctt gtagggcccg
     1621 gtcttgaagg agacggcggt ccgcacctcg ctcggcttga gggagcggac ctcgttcagg
     1681 gccagcttga aggtggaccc ggtatcgcag gtctcgtcga ccagcagcac ccggcggccg
     1741 cgtatggtcg tcggtggacc cgccaccagg atcggctcgc tccccgcgtc ccggcgggtc
     1801 acggccatcg aagcgaactc cacctggagg atggacgcga ccaccacccc cgggatgact
     1861 ccggccttgg cgattccgag aaccacctcg ggctggaact cgcgggccac cttgagggcc
     1921 agggcgcgag tgagctcgcc gaagaagggc cagtcgatct cgagaacacc gcggggctgg
     1981 gactgtgggg cgggacgttt catggcccct aacctatccg ccccttcgtg gcccttcaac
     2041 tgtgcgttgc ggcccacttt aggcaggact atcttagggt caacctaccc tccttgacgc
     2101 caaggatcgt gctccgcaaa tgggtttctg gcggcggttg ttcggcggcg accagaagaa
     2161 tctgaagccg cagcggcttg actacctcaa tgaagcgctg gcgctggaac gtcagggaga
     2221 ctacgagtcg gccctgactt cctatcggct tgcgctgcgc gacaatgcca acgacccacg
     2281 catcctccag aacatggcca tcgcttttac caagaccggc cagctggacg aggccatccg
     2341 gcactaccgg cgggc
//
LOCUS       DATIFF010000871         4542 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_414749, whole genome shotgun sequence.
ACCESSION   DATIFF010000871 DATIFF010000000
VERSION     DATIFF010000871.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4542
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_414749"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..835
                     /gene="rsmA"
                     /locus_tag="VLD58_12750"
     CDS             <1..835
                     /gene="rsmA"
                     /locus_tag="VLD58_12750"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: protein motif:HMM:TIGR00755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HSB55224.1"
                     /translation="ACFLRPPASGLRPSNPSIVLTPKKRLGQHFLHDPNILGRIAEAL
                     EIQPGDTVLEIGPGPGGLTAQLYRRTDRLIAIEKDSDLVPTLRTRFPAMELIEGDALD
                     LDWHALTGPGPVLITGNIPYNITSPLLELALTPPRPARIVFLVQREVADRVASPPGHR
                     EYGALSVGVQSVARVERLFTVPAGAFRPRPKVDSAVLRLTPLDAPLIGDQDVAAFRRF
                     VVGLFGFRRKQLGRGLRVLTDAPAETVQGWLGRAGLDPAFRPEVLSPADFVRLFRAAT
                     D"
     gene            905..1525
                     /locus_tag="VLD58_12755"
     CDS             905..1525
                     /locus_tag="VLD58_12755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA];
                     GO_process: GO:0051775 - response to redox state [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensing transcriptional repressor Rex"
                     /protein_id="HSB55225.1"
                     /translation="MRKIAESTVRRLSLYLRFLEDFEEQGMETVSSEALASRGGTTSA
                     QVRKDLSFFGSFGKRGLGYSVAELVRRLREILGLGRTYRVAMIGAGKIGSALVQYRGF
                     KQRGFDIVAIFDADSSKVGRNWNGLTVRDVKELEAELKRQTVDIAVIVTPADAAQAVA
                     DKVVGLGVKAILNFAPIQLVVPDDVVVKTVNLALELETLSYALTNR"
     gene            complement(1529..4219)
                     /locus_tag="VLD58_12760"
     CDS             complement(1529..4219)
                     /locus_tag="VLD58_12760"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB55226.1"
                     /translation="MSILAQLRTRLEAIVRRAGVDQESAEELRFHLDMETAKLERAGL
                     TPAEARRRARLALGGVGKTLDAVRDERGTNWLEHLPQDLRYAARRLRRSPGFSLVATL
                     TLALGIGANTAIYSVVDGVLLRALPFTDANRLVLVWETDRKSGTTREPASWPDYVDLA
                     ARSRTLDGSAAFTGSEVTLTPADGPPVRVSGMSVSQTFFPLVGVRPLLGRLFAAEDDR
                     PSGPSVVVLGEALWRTGFAADPGIVGRTIRINDHDFQVIGVVGHGADFGLDQVHARAA
                     YHGPYSGTGDVGLWMPLQAHEATWPRETHPFFMLGRLAPGSAVVDAQRELEQIALELE
                     QSYPRSNAARGVHLEAFEEVVFGPSRPMMLLLLGAVALVLLVACVNVANLLLVRGAVR
                     AREIAVRGTLGAGRRRIGQQCLVESVLLAVVGGVAGIGLAFLGLKLLLALAPADIPRV
                     SEVGLNSRVLLTTLLVSVAVGLTFGMVPTIQAFHVDLMSTIRGESPGATTTPAARRFR
                     AGLVIAELALSVSLVIGAGLLIRSFWSVLQVNPGFQAEGVVKAEYQLPVSRYPENYRI
                     WPAWKEVHDFDRRLLEAVRAIPGVTDAAVANANPLDAGFTNSFVVPGREAEARDWPEI
                     SIRIVTPSYFTTLGVPLVNGRGLSDGDDAAAPMVAVINQASARRFFAGTDPLGQHINF
                     WGASRLIVGVVGDERIHGLTDPVPPAVYLPTGQAPRSSVVFARVKGDPHRFVEPLRRA
                     VLTADPALAVYAAEPLTTTLGASQGQRRFAVLVLGAFAAVTFLLALVGIHGVLSYTTS
                     QRTREIGIRMALGATHRGIAGLVLQDGLKLALAGTAIGLVAGAATARFLGGMLYEVGT
                     LDPPTYLMAGLATVGLALVAVWLPARRAARLSPGSCLRTE"
     gene            complement(4216..>4542)
                     /locus_tag="VLD58_12765"
     CDS             complement(4216..>4542)
                     /locus_tag="VLD58_12765"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HSB55227.1"
                     /translation="DLLQGTMELLILKTISVEPMHGWGITQRIELVSRNVLQVNQGSL
                     YPALERLKRKGWIRSEWRLTENNRRARFYHLTVSGRRQLERERETWQRASAAVNCILE
                     WAGGLP"
BASE COUNT          724 a         1567 c         1582 g          669 t
ORIGIN      
        1 ggcgtgcttc ctccggcctc ccgcctccgg cctccggccc tctaacccgt ccatcgtgct
       61 aacccccaag aaacgtctcg gccagcactt cctccacgat cccaacatcc tgggccggat
      121 cgcggaggcg ctggagatcc agcccggcga cacggtgctc gagatcggcc cggggcccgg
      181 cggtctcacc gctcagctct atcggcggac cgatcgcctg atcgcgatcg agaaggacag
      241 cgatctcgtt cccaccctgc gcacccgctt tcccgccatg gagctgatcg agggcgacgc
      301 gctcgatctc gactggcatg ctctcaccgg tcccggaccg gtactgatca cggggaacat
      361 tccctacaac atcacttccc ccctgctcga gctggccctc actccgcctc ggccggccag
      421 gatcgtgttc ctggtccagc gggaggtggc cgaccgggtt gcctcgcccc cgggccacag
      481 ggagtacggc gcactgagcg tgggcgtaca atcggtcgcc agggtggagc ggctcttcac
      541 cgtgccggcg ggggccttca ggccgcgccc caaggtcgac tccgcggtgc ttcggctgac
      601 cccgctcgac gcgcccctga tcggcgacca ggacgtggcc gccttccggc gattcgtggt
      661 ggggctgttc ggatttcggc gcaaacagct ggggcgcggg ctccgcgtac tcacggacgc
      721 gccggcggag acggtgcagg ggtggcttgg ccgggcagga ctggatccgg ccttccggcc
      781 cgaggtgctc tcgcccgccg atttcgtccg gctgtttcgg gccgcgacgg actgatcgcg
      841 ggggcggagt gcctaccgcg gacgggacgg tggggctaga tttgtgaaat ctttcacaat
      901 acccatgcgc aagatcgctg aatccaccgt ccgccggctc tcgctctatc tccgcttcct
      961 cgaggacttc gaggagcagg ggatggaaac cgtcagttcc gaggcgctgg cgtcgcgcgg
     1021 cgggaccacc tccgcgcagg ttcggaagga cctctccttc ttcggctcct tcggcaagcg
     1081 cggcctcggg tacagcgtgg ccgagctggt gcggcggctc cgcgagatcc tggggctggg
     1141 acggacctac cgggtggcga tgatcggcgc gggcaagatc ggcagcgcgc tggtgcagta
     1201 ccgcggcttc aagcagcgcg gcttcgacat cgtcgcgatc ttcgatgccg acagcagcaa
     1261 ggtcgggcgg aactggaacg gtctcacggt gcgggacgtg aaggagctcg aggccgaact
     1321 caagcgccag accgtggaca tcgcggtgat cgtgacgcca gccgacgcgg cccaggccgt
     1381 ggccgacaag gtggtcgggc tcggggtgaa ggcgatcctc aatttcgccc cgatccagct
     1441 cgtggttccc gatgacgtgg tagtgaagac ggtgaacctg gcgctggagc tggagacgct
     1501 gagctacgcg ctcaccaacc gctagccgct actccgtcct gagacacgag ccgggcgaaa
     1561 gccgcgccgc cctccgggcc ggcagccaca cggcgacgag cgccagcccc accgtcgcga
     1621 ggcccgccat caggtaggtc ggcggatcca gagtccccac ttcgtagagc atcccgccga
     1681 ggaacctcgc cgtcgccgcc ccggcaacca gcccgattgc cgtccccgcc agcgccagct
     1741 tgagtccgtc ctgcagtacc agcccggcaa ttccgcggtg ggtagcgcca agcgccattc
     1801 tgatgccgat ctcacgggtc cgctgcgagg tggtgtagct caggactcca tgaatgccca
     1861 ccagcgccag caggaaggtc accgctgcaa aggcgcccag caccagcacc gcgaagcggc
     1921 gctgtccctg tgaggcgcca agcgttgtcg tcagcggttc agcggcatag acagccaggg
     1981 ccggatcggc ggtgagcacc gcccggcgga gcggttcgac gaagcgatgc gggtcgccct
     2041 tcacccgcgc gaacaccacg ctcgagcgcg gcgcctggcc ggtcgggagg tacactgccg
     2101 gcgggaccgg atcggtgagg ccgtggatcc gctcgtcgcc caccacaccc acgatgaggc
     2161 gtgacgctcc ccagaagttg atgtgctgcc ccagcggatc cgttcccgcg aagaagcgcc
     2221 gggcggaggc ctggttgatg accgcgacca tgggggccgc ggcatcgtcc ccgtcgctca
     2281 gcccgcggcc gttcaccagc ggcacaccca gagtcgtgaa gtaggatggt gtgacgatcc
     2341 ggatcgagat ctcgggccag tcccgcgcct cggcttcccg ccccgggact acgaacgagt
     2401 tggtgaaccc ggcgtcgagc gggttggcgt tggcgacggc cgcgtccgtg actcccggaa
     2461 tggcccgcac cgcctcgagc agccgccggt cgaagtcgtg cacttccttc caggccggcc
     2521 agatccggta gttctcgggg taccgcgaga ccggcagctg atactccgcc ttgaccacgc
     2581 cctcagcctg gaatcccgga ttcacctgca gcaccgacca gaagctgcgg atcagcaggc
     2641 ccgcgccgat caccaggctc accgaaagcg ccagttccgc gatgacgagc ccggcgcgga
     2701 accggcgagc cgcgggcgta gtggtcgctc ccggagactc gccccggatg gtgctcatca
     2761 ggtcgacgtg gaaggcctgg atcgtgggga ccatgccgaa ggtgaggccg acggcgaccg
     2821 acaccagcag cgtggtgagc aggacccggg aattgagccc gacttcgctg actctcggga
     2881 tgtccgcggg agccagcgcc agcaggagct tgagcccgag gaaggccagg ccgatcccgg
     2941 ctaccccgcc caccacggca agcagtaccg actcgaccag gcactgctgt ccgatgcgcc
     3001 ggcggcccgc acccagggtt ccccgtaccg cgatctcccg ggcgcggacc gcgccgcgga
     3061 ccaggagcag gttggcgacg ttgacgcacg ccaccagcag gaccagcgcc accgcaccca
     3121 ggaggagcag catcatcggc cggctgggac cgaagaccac ctcttcgaag gcctcgaggt
     3181 ggaccccgcg cgccgcgttg gaccggggat agctctgctc cagctccagc gcgatctgct
     3241 ccagctcgcg ctgcgcgtcg actaccgcgc ttcccggggc cagccgtccc agcatgaaga
     3301 agggatgggt ttcgcgaggc caggtggctt cgtgggcctg gagcggcatc cagagaccga
     3361 cgtcgccggt tccggagtag gggccatggt aggcggcgcg ggcatgcacc tggtcgaggc
     3421 cgaaatcggc gccatgcccc accacgccga tgacctggaa atcgtgatcg ttgatccgga
     3481 tggtgcggcc gacgatcccg ggatcggcgg cgaacccggt gcgccagagc gcttccccca
     3541 ggaccaccac cgacggaccg gagggccggt catcctcggc ggcgaaaagc cggccgagca
     3601 gggggcgtac cccaaccagc gggaagaagg tctgggagac cgacatcccg gagacccgga
     3661 ccggggggcc gtcggcgggg gtcagggtga cctcgctgcc ggtgaaggcg gcgctgccgt
     3721 cgagtgtgcg gctccgcgct gccaggtcca catagtcggg ccacgaggcg ggctcacggg
     3781 tcgtcccact cttccggtcg gtctcccaca cgaggaccag gcgattggcg tcggtgaagg
     3841 gcagggcccg gagcagcacg ccgtcgacca cgctgtagat ggccgtgttg gccccgatgc
     3901 cgagcgccag cgtcagcgtg gcgaccaggg agaagccagg ggagcggcgc aaccggcgcg
     3961 cggcgtagcg gaggtcctgg ggcagatgtt cgagccagtt ggtgccccgc tcgtcgcgga
     4021 cggcatccag cgtctttccc acaccgccaa gcgccagccg ggcccggcgc cgggcttcgg
     4081 caggcgtgag gccggcgcgt tccagcttgg cggtctccat gtcgagatgg aatcgcaact
     4141 cctccgccga ctcctggtcc accccggctc gccggacgat ggcttcgagg cgagtgcgca
     4201 gctgggcgag aatgctcatg ggaggcctcc ggcccattcg aggatgcagt tcacggcggc
     4261 cgaggcgcgc tgccaggtct cccgctcccg ttcgagctgg cggcggcccg agacggtcag
     4321 gtgatagaag cgggctcggc ggttgttctc ggtgagccgc cattcggagc ggatccatcc
     4381 tttccgcttg aggcgctcga gggcggggta gagggatccc tggttcacct ggagcacatt
     4441 gcgggagacc agctcgatgc gctgggtgat gccccagcca tgcatcggtt cgaccgagat
     4501 ggtcttgagg atgaggagct ccatggtgcc ctggagcaga tc
//
LOCUS       DATIFF010000872         4064 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1799905, whole genome shotgun sequence.
ACCESSION   DATIFF010000872 DATIFF010000000
VERSION     DATIFF010000872.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4064
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1799905"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..466)
                     /locus_tag="VLD58_12770"
     CDS             complement(<1..466)
                     /locus_tag="VLD58_12770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55228.1"
                     /translation="MSWKRSIGALLLLALTACGGNQRLQQEVDAWLVQYNQTYQQLSY
                     AANQADWQSQTHIVEGDTTNAARTRAAKGDLAKFVGSVGNIEKIRGYLKRADRLTPLQ
                     VAQLNMMLFYAGDSPGLVPEVVKQRIAAETEQTEKLYGFGFTLKGKPLTPNDI"
     gene            569..1465
                     /locus_tag="VLD58_12775"
     CDS             569..1465
                     /locus_tag="VLD58_12775"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSB55229.1"
                     /translation="MPRTTLLAVLVLAGSASLAAAQNPDSVTFTRQRLAEGLYLLQGS
                     GGNIALSAGKDGVFLIDDDEQPLTAKLKAAVAGVSTGPIRFVINTHWHGDHTGSNAAL
                     GAEGTIIVAQENVRQRMSRDQVNKVFKMTVPASPAVALPVVTFGETMTLYLNGDTVDI
                     IHARAAHTDGDAIIHFRKANVIHAGDTFFNGLYPYIDVGSGGSLDGMIDATDKILSMA
                     DDQTKIIPGHGPLGNRAQLKGYRDMLAAVRLRFSRARGQGLTAEQVVNANLLADYDST
                     WGKGWLTPAQFAAITYAAVPRP"
     gene            complement(1587..2249)
                     /locus_tag="VLD58_12780"
     CDS             complement(1587..2249)
                     /locus_tag="VLD58_12780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55230.1"
                     /translation="MPSNMFTVLSVLAFLGTAGLVLLGLTVAVWGAVRHNGVLLRHSL
                     QGIGTVALVYGLVLTAVSLVSQERVLPPGAEKYFCELDCHLAYSVAGAEPIRTAAGGN
                     TTWAVRLRTRFDERTISPRRSREAPLWPNPRSLALVGSDGRWYAESAELAAALAERST
                     PITKELKPGESYTTVLTFVLPPGVKPSKLDVAEDVFVNRLIIGHEASFLHRPVLLSVA
                     AG"
     gene            complement(2269..3423)
                     /locus_tag="VLD58_12785"
     CDS             complement(2269..3423)
                     /locus_tag="VLD58_12785"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSB55231.1"
                     /translation="MPRCDVLVVGAGLAGLWTARRLAGAGLHVVLVDGRARVDQQIRT
                     TGIFVRRTLEDFDLPEDCFGPVVQRVVLYSPGRRSQVLDSPHPEFRVGRMGPLYRRLL
                     DEARAAGVEWRPRTRCTGIGAGDEPVVKLTGKGSSTLSPRFIIGADGARSRVAGWLGL
                     DQNREWIAGVEEVYTGVPLEGPAVFHCLLSTELAPGYLAWMVHDGEEVHLGVGGHPDR
                     FDPARALERLKAEPPVPVDWGRAKLVDRRGGLIPVGGVLPRIANRRGLLVGDAAGAVS
                     PLTAGGLDPCVRLSDLAARVTVDLLESGDPSALAPYEGGSFRRRFASRLMLRRLLSGL
                     ERPWLLEGATALLRLPPFERVARKVFFGRGSFPDVPGWIPGRRITRSAVA"
     gene            complement(3410..>4064)
                     /gene="uppS"
                     /locus_tag="VLD58_12790"
     CDS             complement(3410..>4064)
                     /gene="uppS"
                     /locus_tag="VLD58_12790"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="polyprenyl diphosphate synthase"
                     /protein_id="HSB55232.1"
                     /translation="RPRARGHEAGAAAVRRAVRAAADQGVGILTLYAFSSDNWRRPRA
                     EVDSLMGLFLEHFRTQAAECRERGIRLTAVGRRDRLPLPLRAAIGAAERATSGGQRLW
                     LRIAIDYSSRDLLLRAARRMNERTATRERFAAELGAVQHDRRPAPDVDLLIRTGGERR
                     LSDFLLWEAAYAELLFSDIAWPDFTENDMALALADFRTRERRFGGLDRSAGDRDAAV"
BASE COUNT          669 a         1446 c         1363 g          586 t
ORIGIN      
        1 cgatgtcgtt cggggtgagc ggctttccct tgagggtgaa gccgaagccg tagagcttct
       61 cggtctgctc cgtctccgcc gcgatccgct gcttgaccac ctcgggcacc agcccggggc
      121 tgtcaccggc gtagaagagc atcatgttga gctgggccac ctggagcggc gtgaggcggt
      181 cggcccgctt gagatagccg cggatcttct cgatgttccc gacactcccc acgaacttcg
      241 ccaggtcacc cttggccgcc cgggtacgcg ccgcgttggt ggtgtcgccc tcgacgatgt
      301 gggtctgcga ctgccagtcc gcctggttcg cggcgtagga gagctgctga taggtctggt
      361 tgtactgcac cagccaggca tccacttcct gctggaggcg ctggttgccg ccgcaggcgg
      421 tgagagccag gaggagcagc gcgccgatcg agcgtttcca ggacatcggg aacccgcggg
      481 tagaggaccg cggtaatgta acggcgggat gcgctagatt aggaccttcc ttgtccccaa
      541 tccgatcgac ctgcctcagg gagcgttcat gccccgcacc acgctgctcg ctgtccttgt
      601 ccttgccggc tccgcctcgc tcgccgcggc ccagaacccc gactcggtca ccttcacgcg
      661 gcagcgtctg gccgaaggcc tctacctgct ccagggttca ggaggaaaca tcgccctctc
      721 cgccgggaag gacggggtgt ttctcatcga tgacgacgag cagccgctca cggccaagct
      781 caaggcggcg gtcgccggtg tctccaccgg gccgatccgc ttcgtcatca acacccactg
      841 gcatggcgac cataccggca gcaacgccgc cctcggcgcg gaggggacga tcatcgtggc
      901 gcaggagaac gtgcgccagc ggatgagccg cgatcaggtc aacaaggtgt tcaagatgac
      961 cgtgccggct tctcccgccg tggccctccc ggtggtcacc ttcggcgaga cgatgacgct
     1021 ctatctcaac ggagacaccg tcgacatcat ccacgccagg gcggcccaca ccgatggcga
     1081 tgccatcatc cacttccgga aggccaacgt catccatgcc ggcgacacct tcttcaacgg
     1141 cctgtatccc tacatcgacg tcggctccgg cggttccctc gacggcatga tcgacgcgac
     1201 cgacaagatt ctctcgatgg cggacgacca gacgaaaatc atccccggcc acggcccgct
     1261 ggggaaccgg gcccagctca aaggctatcg cgacatgctg gcggcagtgc ggctccgatt
     1321 ctcccgggcc cggggccagg gcctgaccgc cgaacaggtg gtgaacgcca atctgctcgc
     1381 ggactacgat tcgacctggg gcaagggatg gctcactccg gcgcagttcg ccgcgatcac
     1441 ttacgccgcg gtgccgcgtc cataggcagg aaacagctta ccacagattt tcaccgatgc
     1501 ttacggatga acaggaccgg ttgactgctc ggcaaccctc cagttcatcg gtgtccatcg
     1561 gtgctcatct gtggtatgca gttggtttag ccagccgcca cgcttagcaa taccggccgg
     1621 tggagaaaac tcgcctcgtg cccgatgatc agccggttca cgaacacatc ctccgccacg
     1681 tcgagcttgg acggcttgac cccgggcggc agcacgaagg tgagcaccgt ggtgtacgac
     1741 tcgcccggct tgagttcctt cgtgatcggg gtcgagcgct cggccagcgc tgccgccagt
     1801 tcggccgact cggcgtacca ccgcccatcg gaacccacca gcgcgagact gcggggattg
     1861 ggccagagcg gcgcctcccg gctccgccga ggcgagatgg tccgctcgtc gaaccgggtc
     1921 cgtagccgta ccgcccaggt cgtgttcccg cctgcagcgg tcctgatcgg ctccgccccc
     1981 gccacactgt aggccaggtg gcagtcgagc tcgcagaagt acttctccgc tcccggcggg
     2041 agcacccgct cctggctcac caggctcacc gctgtcagta ccagtccata caccagcgcc
     2101 acggtaccga tcccctggag actgtgccgc aggagcaccc cgttgtgccg gaccgcgccc
     2161 cagacggcaa cggtgagacc gagcaggacc aggccggcgg tgccgaggaa ggcaagcacg
     2221 gagaggacgg tgaacatgtt ggacggcatc agggcatcct cctgggagtc aggcgacggc
     2281 tgaccgggta atccggcgcc cggggatcca gccgggcaca tcgggaaacg agccgcgtcc
     2341 gaagaagacc ttccgggcca cccgctcgaa gggcggcaga cgaaggagcg cggtggcgcc
     2401 ttccaggagc caggggcgtt cgagtcccga caggagccga cggagcatga gccgcgaggc
     2461 gaagcggcgg cgaaaggatc ctccctcgta gggagccagc gcggaggggt ccccgctctc
     2521 gagcagatcc acggtgacgc gcgccgcgag atccgaaagc cgcacacagg gatcgagccc
     2581 gccggcggtc aggggcgaga cggcgcccgc cgcgtcgccg accaggaggc cgcgccggtt
     2641 cgcgattctc ggcaagacac cacctaccgg gatcagcccg ccccggcggt cgaccagctt
     2701 cgcccggccc cagtcgaccg gcaccggcgg ctccgccttg agccgctcga gcgcccgagc
     2761 cggatcgaac cggtcgggat gaccgcccac gccgaggtgc acttcttccc cgtcatgcac
     2821 catccaggcg agatagcccg gcgccagctc ggtcgagagg aggcagtgaa agacggccgg
     2881 cccctcgagc ggcacaccgg tgtagacctc ctcgaccccc gcgatccact cgcggttctg
     2941 gtcgaggccg agccaaccgg cgacgcgcga ccgggcgccg tcggcgccga tgatgaaccg
     3001 gggcgagagg gtggagctgc ccttccccgt cagcttcacg accggctcgt cgccggcgcc
     3061 gatcccggtg caccgggtac gcggccgcca ctcgaccccg gcggcgcggg cctcgtccag
     3121 gagccgccgg tacagcggcc ccatgcgccc gacccggaac tccgggtggg ggctgtcgag
     3181 cacctggctc cggcgcccgg gcgagtagag caccacccgc tgcaccaccg gcccgaaaca
     3241 gtcctccggc agatcgaagt cctcgagggt gcggcggacg aagatcccgg tggtgcggat
     3301 ctgctggtcc acccgggccc ggccgtccac cagcacgaca tggagccccg cccccgccag
     3361 ccggcgcgcg gtccagagac cggccagtcc cgcgcccacc accagtacat cacaccgcgg
     3421 catcgcggtc tcccgcggac cggtccaggc caccaaagcg ccgttcccgg gtcctgaagt
     3481 cggccagagc gagcgccatg tcattctcgg tgaagtcggg ccacgcgatg tcgctgaaca
     3541 ggagttcggc gtaggcggct tcccagagga ggaaatcgct caggcggcgt tccccgccgg
     3601 tgcggatcag gagatcgacg tcgggcgcgg ggcgccggtc gtgctggacc gcccccagct
     3661 ccgcggcgaa tcgctcgcgg gtggcggtcc gctcgttcat ccgtcgcgcg gcgcggagca
     3721 gcaggtcgcg ggaggagtag tcgatggcaa tccgaagcca gagccgctgg ccgccactgg
     3781 tggcgcgttc ggcggcgccg atggcagccc ggagcggcag cggcagccgg tcgcgccggc
     3841 ccaccgcggt gagcctgatc ccccgctccc ggcactcggc cgcctgggta cggaagtgct
     3901 cgaggaagag acccatgaga gagtcgacct cggcccgcgg gcggcgccag ttgtcgctcg
     3961 agaaggcgta gagggtgagg atcccgacac cctgatcggc cgcggcccgt accgcccgcc
     4021 gcacagcggc ggcgccggct tcgtgtcctc gcgcgcgggg ccgc
//
LOCUS       DATIFF010000873         1526 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1954228, whole genome shotgun sequence.
ACCESSION   DATIFF010000873 DATIFF010000000
VERSION     DATIFF010000873.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1526
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1954228"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(159..1151)
                     /locus_tag="VLD58_12795"
     CDS             complement(159..1151)
                     /locus_tag="VLD58_12795"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSB55233.1"
                     /translation="MTVSRLARMASLILAVLLLPMTLEAQPQGKVVRIGLLDIGASNP
                     SSDVRWKALRDRLRELGFVEGQNVAFESRWGNGQMDRLPGLAAELVNLKVDVMVTAGG
                     ESVLAAKRVSSSIPIVMATCPDPVRLGLVASLARPGGNVTGVISLNADLAGKRLELLK
                     QVVPRVARVVVLRDPDNRSSEFSVLDAERVAKPLGVVIHSVDARGQKEFDAAFLAMKR
                     ARADAVILGVNTPFIAHRRRLAELAVSHRLPMMAPAREYAAAGALVSYGTDYPDQFRR
                     AAMYVDKILKGARPADLPIEQPTKFELVINLKTARALGLTIPPSVLGRADDLIQ"
     gene            1264..>1526
                     /locus_tag="VLD58_12800"
     CDS             1264..>1526
                     /locus_tag="VLD58_12800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55234.1"
                     /translation="MPDQLSRGYRAVETLYHAYLTGLILTVVSRRGAAAAGELVFRTF
                     RRQHLEKFLPGLEKLGLSKLPPAVACAQYHYLSNHLGGVRVEY"
BASE COUNT          254 a          510 c          521 g          241 t
ORIGIN      
        1 aagcatcccg gggcgcttga gatcatccac gtagcggccc gcgcccgtga ggagccgccg
       61 gtcttccttt cgcagcggcg aggcgccgat caggtcctgg ggcggggtca cgggaggagt
      121 gtattacgca caggccggat cgcgccagcg atccaggcct actggatcag atcgtctgcc
      181 cgtcccagca ccgacggcgg gatggtcaat ccgagcgccc gggccgtctt gaggttgatc
      241 accagctcga acttggtggg ttgctcgatg gggagatcgg cgggtcgagc gcccttgagg
      301 atcttgtcca cgtacatggc ggcccgtcgg aactggtccg gatagtcggt gccgtagctg
      361 acgagggctc ccgccgccgc gtactcccgc gcgggcgcca tcatgggcag ccggtgcgac
      421 accgcaagct cggcgagacg ccggcggtga gcgatgaagg gcgtgttcac gcccaggatg
      481 acggcgtcgg cgcgggcccg cttcatggcc aggaaggcag catcgaactc cttctgacct
      541 ctcgcgtcga cgctgtgtat caccaccccc agaggctttg ccaccctctc cgcgtcgagc
      601 acggagaact cggaggaacg gttgtcggga tcgcggagga cgacgacgcg cgcgacgcgc
      661 gggaccacct gcttgagaag ctccagccgt ttgccggcca ggtcggcgtt gagcgagatc
      721 acccccgtca catttccacc cggccgggcc aggctggcca cgagtcccag ccgcacggga
      781 tcagggcagg ttgccatgac gatggggatc gagctggaga ctcgcttggc ggcgaggacg
      841 gattcgccgc ccgccgtcac catgacgtcg accttgaggt tgacgagctc ggcggcgagg
      901 cccggcagtc gatccatctg tccgttcccc caccgggact cgaaggcgac attctggccc
      961 tccacgaatc ccagctctcg cagccggtcg cgcagcgcct tccagcggac gtcgctcgat
     1021 ggattggagg cgccgatgtc cagcagaccg atccgcacca ccttcccctg cggctgtgcc
     1081 tcgagggtca tcgggaggag gagaacagcc aggatcagag aggccatgcg agcgaggcgt
     1141 gacaccgtca tgccgacctc cggatcgaga tgcaagcggc acagcatagc gtgacgaccg
     1201 acggccagaa agggcgaatt cgacgggcgc cccccagggc agttcccggc gtaagatgtc
     1261 gccgtgccag atcagctctc ccggggctac cgggcggtcg aaaccctcta ccacgcctat
     1321 ctcaccgggc tcatcctgac cgtggtgagt cggcggggag ccgccgccgc cggcgagctc
     1381 gtgttccgca cctttcgccg ccagcatctg gagaagtttc tgcccggcct cgagaagctg
     1441 ggtctctcga agctgccgcc cgcggtggcg tgcgcgcagt accactacct ctcgaatcac
     1501 ctgggcgggg tgcgggtgga gtacat
//
LOCUS       DATIFF010000874         1317 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1800217, whole genome shotgun sequence.
ACCESSION   DATIFF010000874 DATIFF010000000
VERSION     DATIFF010000874.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1800217"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..299)
                     /locus_tag="VLD58_12805"
     CDS             complement(<1..299)
                     /locus_tag="VLD58_12805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55235.1"
                     /translation="MSMLKHAKIPAIAVAALLTAVVPGQAVAQGGVNLVPWAGVYIPT
                     KNSISDLDNALSRDVSVMGGARLTFWGTGMLGFEAVGGYAPAKITGETINETNTNL"
     gene            complement(442..750)
                     /locus_tag="VLD58_12810"
     CDS             complement(442..750)
                     /locus_tag="VLD58_12810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55236.1"
                     /translation="MPRGDKSAYSGKQKRQAEHIEEGYERRGVSKREAQRRAWATVNK
                     ETGGGKKSGSGRGKKTSKSSSRKGGRLGGRASASRPKSARSASARKAAATRKRRSRGR
                     "
     gene            complement(1052..>1317)
                     /locus_tag="VLD58_12815"
     CDS             complement(1052..>1317)
                     /locus_tag="VLD58_12815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55237.1"
                     /translation="TLLRALEPESVVVYGVATDLAVKHTIEGLLRHWPRAELLLVTDA
                     VRSFSTEEADRLLTSWRERGIHLVGAADMLSRPEVEGGIGRGV"
BASE COUNT          201 a          454 c          446 g          216 t
ORIGIN      
        1 aggttggtgt tggtctcgtt gatcgtttcc ccggtgatct tggcaggcgc gtaaccgccg
       61 accgcctcga accccagcat accggtgccc cagaaggtga gacgggcacc tcccatgacg
      121 ctcacgtccc ggctcagggc gttatcgagg tccgagatcg agttcttggt cgggatgtac
      181 acgccggccc acggcaccag gttgacaccg ccttgcgcca cggcctggcc gggcacgacg
      241 gcggtgagca gggcggcgac tgcgatcgcc ggaatcttcg catgcttcag catcgacata
      301 cgcactcctt gaggaacagt gccggccgcc cggtgaagct cagcggcgcc ggacgacgcc
      361 cggcacccgc acactgcctc gaatgggccc gcggcgctgt gaagcagggt ggccggcgga
      421 tgtgaaccca gtcacgcgca ctcaacggcc gcgcgaccgc cgcttccggg tggcggccgc
      481 cttccgagcc gaggcggacc gggccgattt cggccgcgag gccgatgccc ggcccccgag
      541 gcggccgccc ttcctcgacg agctcttcga tgtcttcttc ccgcggcccg acccgctctt
      601 cttgccgcca ccggtctcct tgttgaccgt cgcccatgcg cgccgctgcg cctcgcgctt
      661 ggacacgccg cgccgctcat agccctcttc gatgtgctcg gcctggcgtt tctgcttgcc
      721 gctgtaggcc gatttgtctc cgcgaggcat ggaccctctc cgtcgtgagt gatgccggaa
      781 catcgagccc tggcgcgggg cggaccgtgt ggaaggtcac agtcgagatc gggaaaggtg
      841 ggtggaacgg gcacgaatgc ccgttcccgc gagatggttt tgaagaaagg ggatgggatg
      901 ggatatacag cgggagcagg gggctgaacg gcgcatccgg ccgctgagca gggggctcag
      961 ggttggttcg gacgtctcgc aagtgccatc cggccatgct cccactactc acgcaagata
     1021 gaccgtccga aaggcggtgc tgtgcgttgg atcacacccc ccggccgatc cctccctcga
     1081 cctccgggcg cgacagcatg tccgccgcgc ccaccagatg gatgccccgc tcgcgccagc
     1141 tcgtcagcag gcgatccgcc tcctcggtgg aaaacgagcg gacggcgtcg gtgacgagca
     1201 gcaactcggc ccgcggccag tgccgcagga gtccctcgat ggtgtgcttg acggcgaggt
     1261 ccgtggcgac gccgtatacg acgaccgact cgggctccag cgcgcgcagc agcgtgg
//
LOCUS       DATIFF010000875         2916 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_415327, whole genome shotgun sequence.
ACCESSION   DATIFF010000875 DATIFF010000000
VERSION     DATIFF010000875.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2916
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_415327"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..281)
                     /locus_tag="VLD58_12820"
     CDS             complement(<1..281)
                     /locus_tag="VLD58_12820"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004185 - serine-type carboxypeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HSB55238.1"
                     /translation="MRRGLAVLLALAAAAEPAGAQSIAKRVEAVMARPEFAHAFFGVE
                     FYDLDAGKAVYRLNGDRFFTPASTTKLLTVGTALELLGSDYRFHTRIYRT"
     gene            complement(281..787)
                     /locus_tag="VLD58_12825"
     CDS             complement(281..787)
                     /locus_tag="VLD58_12825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55239.1"
                     /translation="MRFELKPITASGIPGALQKAERYRLLNDPSAAESICLDILEVDP
                     QNQPALVMLLLTRSDQFPVTMAAGAARAREVLPRLADEYKRAYYAGVIHERLAKALLH
                     SGRPGSSPMAYDEFRAAMECYEQAEPLRPAGNDEARLRWNTCARTLNSTPHLVPRGEE
                     RFEPMLEE"
     gene            complement(806..1561)
                     /locus_tag="VLD58_12830"
     CDS             complement(806..1561)
                     /locus_tag="VLD58_12830"
                     /inference="COORDINATES: protein motif:HMM:NF009052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HSB55240.1"
                     /translation="MTAATFRIWRGEAGQGAFTDYPTEVSEGMVVLDAVHQIQAEQAG
                     DLAVRWNCKAGKCGSCSAEINGQPRLMCMTRLNELDLAKPVTVEPMRAFPHHRDLVTD
                     VSWNYRVKQQIRKFTPRAADAADGTWRMDQEDVDRVQEFRKCIECFLCQDVCHVLRDH
                     QLHEEFIGPRYLVYTAALEMHPLDTLDRREELRKAHGIGYCNITKCCTKVCPEGITIT
                     DNAIIPLKERVMDHAFDPIVKLVGLIKGTVPGP"
     gene            complement(1558..>2916)
                     /locus_tag="VLD58_12835"
     CDS             complement(1558..>2916)
                     /locus_tag="VLD58_12835"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HSB55241.1"
                     /translation="GIDVFMEYTIQRLLKDGGRIAGAFGYHRPTGKFVLFRTKAVVLA
                     TGGIGKAYAITSNSWEYTGDGHSLALWAGADLMDMEFVQFHPTGMVWPPSVRGILVTE
                     GVRGDGGTLKNAKGERFMFRYIPEFFRAETAETEEEADRWYTDKKGARRTPDLLPRDE
                     VARAINAEVKAGRGSPHGGVFLDIAWIREKIPKAAEHIRKKLPSMYHQFKQLADIDIT
                     TTPMEIGPTTHYIMGGIRVDGDTQMSTVPGLFAAGEAAAGLHGANRLGGNSLSDLLVF
                     GKRAGEYAARFAKDHAPLVPDAGEVNESVREALAPFERPGGENPYAVQHDLQAMMQDL
                     VGIVRKEGEMARAVDGLAALRKRAERVGVTGHREYNPGWHTALDLENLLTVSEAIVTA
                     ALARKESRGGHFRDDFPGKDAGYATFNFVLRRGPSGGMDLAREPIPPMRPELAQIIEE
                     MK"
BASE COUNT          400 a         1008 c         1014 g          494 t
ORIGIN      
        1 gtccggtaga tccgggtatg aaagcggtag tcggagccca ggagctcgag ggcggtcccg
       61 acggtgagca gcttggtggt cgaggcggga gtgaagaacc ggtcgccgtt caggcgatag
      121 accgccttgc ccgcgtcgag atcgtagaac tcgacgccga agaaggcatg ggcgaactcg
      181 gggcgcgcca tcacggcctc gacccgtttc gcgatggact gggcgccggc cggctccgcg
      241 gcggcggcca gggccagcag gacggcgagg ccgcggcgca tcattcctcc agcatcggct
      301 cgaaccgctc ctcgccgcgc gggacgaggt ggggcgtgga gttgagcgtc cgggcgcagg
      361 tgttccagcg cagccgggcc tcgtcgttcc ccgccgggcg gagcggctcg gcctgctcgt
      421 agcactccat cgccgcgcgg aactcgtcgt acgccatcgg cgagctgccg ggccgtcccg
      481 aatggaggag cgccttggcc agccgttcgt ggatcacccc ggcgtagtag gcccgcttgt
      541 actcgtccgc caggcgggga agcacctcgc gggcccgcgc cgcgccggcc gccatcgtca
      601 cgggaaactg gtcgctccgg gtgagcagca gcatcaccag cgcgggctgg ttctgcggat
      661 ccacctcgag gatgtcgagg cagatgctct ccgccgcgga cgggtcgttg agcagtcggt
      721 agcgttcggc cttctgcagg gcgccgggaa tccccgacgc ggtgatgggc ttgagctcga
      781 agcgcatggc gtccaccggc cggggtcagg gccccggcac ggtccccttg atgagtccca
      841 ccagcttgac gatcggatcg aaggcgtggt ccatcacccg ctccttgagc gggatgatcg
      901 cgttgtcggt gatcgtgatg ccctcgggac agaccttcgt gcagcacttg gtgatgttgc
      961 agtacccgat cccgtgcgcc ttccggagct cctcccggcg gtcgagggtg tcgagcggat
     1021 gcatctcgag cgccgccgtg tagaccaggt accgcggccc gatgaactcc tcgtggagct
     1081 ggtggtcccg gagcacgtgg cagacgtcct ggcagaggaa acactcgatg cacttccgga
     1141 actcctgcac ccggtccacg tcttcctggt ccattcgcca ggtcccgtcg gccgcgtccg
     1201 ccgcccgggg ggtgaacttc cggatctgct gcttgacgcg gtagttccag ctcacgtcgg
     1261 tcaccaggtc gcggtggtgc gggaaggccc gcatcggctc caccgtcacc ggtttggcca
     1321 gatccagctc gttgagccgg gtcatgcaca tgaggcgcgg ctggccgttg atctcggccg
     1381 agcaggagcc gcacttgccc gccttgcagt tccagcgcac ggccaggtcg ccggcctgct
     1441 cggcctggat ctggtggacg gcgtcgagca ccaccatccc ctcggacacc tcggtcgggt
     1501 agtccgtgaa ggcgccctgg cccgcctcgc cgcgccagat ccggaaggtg gcggccgtca
     1561 tttcatctcc tcgatgatct gcgcgagctc ggggcgcatc ggtggaatcg gctcgcgcgc
     1621 caggtccatg ccgccggagg ggccccgccg gagcacgaaa ttgaacgtgg catagccggc
     1681 gtccttgccg gggaagtcgt cgcggaagtg tcccccgcgg ctctccttcc gggccagcgc
     1741 ggcggtgacg atggcttcgg acacggtgag gaggttctcc aggtcgagcg ccgtgtgcca
     1801 gccgggattg tattcccggt ggccggtgac tcccacccgc tcggcccgct tccggagcgc
     1861 ggcgagcccg tcaaccgcgc gggccatctc cccttccttg cgcacgatcc cgacgagatc
     1921 ctgcatcatg gcctggaggt cgtgctggac cgcgtagggg ttctccccgc cgggccgttc
     1981 gaacggggcg agcgcctcgc gcaccgactc gttcacctcg cccgcatcgg ggacgagcgg
     2041 ggcgtgatcc ttcgcgaacc gcgccgcgta ctcgccggcc cgcttcccga agacgaggag
     2101 gtccgagagg gaattgccgc cgagccggtt ggcgccgtgg agccccgcgg cggcctcgcc
     2161 ggccgcgaag aggcccggca ccgtgctcat ctgggtatca ccgtccacgc ggattccgcc
     2221 catgatgtag tgggtggtcg gcccgatctc catcggggtg gtcgtgatgt cgatgtcggc
     2281 gagctgcttg aactggtgat acatgctcgg cagcttcttg cggatatgct cggccgcctt
     2341 cggaatcttc tccctgatcc aggcgatgtc gaggaacacc ccgccgtgcg ggctgccccg
     2401 tccggccttg acctcggcgt tgatggcccg cgccacctcg tcccgcggca ggaggtccgg
     2461 cgtccgccgg gcgcccttct tgtccgtgta ccagcggtct gcctcttcct cggtctcggc
     2521 cgtctccgcc cggaagaact ccgggatgta ccggaacatg aagcgctcgc ccttggcgtt
     2581 cttcagcgtg ccgccgtcgc cccggacgcc ctcggtcacc aggatcccgc ggacgctcgg
     2641 cggccagacc atcccggtcg ggtggaactg gacgaactcc atgtccatga ggtcggcgcc
     2701 ggcccacagc gccagcgagt ggccgtcgcc cgtgtactcc cacgagttcg aggtgatcgc
     2761 gtaggctttg ccgatcccgc cggtggccag cacgaccgcc ttggtccgga agagcacgaa
     2821 cttcccggtg ggccggtggt agccgaaagc ccccgcgatg cggccgccgt ccttcaggag
     2881 ccgctggatc gtgtactcca tgaacacgtc gatgcc
//
LOCUS       DATIFF010000876         2447 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_570355, whole genome shotgun sequence.
ACCESSION   DATIFF010000876 DATIFF010000000
VERSION     DATIFF010000876.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2447
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_570355"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..199
                     /locus_tag="VLD58_12840"
     CDS             <1..199
                     /locus_tag="VLD58_12840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55242.1"
                     /translation="AQELGVTSVMVTHDVRGAFRVANRLALLTGGKIVMQGTPEEFHA
                     SKHPKVKEFLERDFDTPSFAA"
     gene            207..1112
                     /locus_tag="VLD58_12845"
     CDS             207..1112
                     /locus_tag="VLD58_12845"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HSB55243.1"
                     /translation="MELRYGREAIVGALVIIAVAIFVGGTMWLSGRSLGRRHLVKAGF
                     RSAAGLKRASPVTVSGVTVGRVEKIELAQPGKVIVSMSLRPDIKPKKDAKAYIASVTF
                     VGDYVIQFEPGDSAAPFPADSVVPGLMRSDIGGRAAALSDRAESLMVGLKYFANEQTA
                     QDLRASLKAFQGTMTEFQKTLRGFSDPKTGAGPEITRTMQSLQQLSTRLDTTLADPAV
                     AGILRNTDTLTRDLAGMTRQFTAVSSRLDTLLNGVNQGRGTMGKLTTDSTLYYELRDL
                     SAAMKGLVAELQKNPGKLGITVKVF"
     gene            1135..1734
                     /locus_tag="VLD58_12850"
     CDS             1135..1734
                     /locus_tag="VLD58_12850"
                     /inference="COORDINATES: protein motif:HMM:NF024724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HSB55244.1"
                     /translation="MPTFDPSRRLSARFDQAFAYASLLHASQTRKGSRTPYIAHLMGV
                     AALVLEDGGSEDEAIAGLLHDAVEDHPRDGHTEEEIRLLFGERVLRIVLGCTDAFEHP
                     KPSWKKRKVDYLQHLAAAPADVRRVSAADKLHNARAMLHDYRHQGERLWRRFHAGKKD
                     QLWYYRSLVDVLKKGHRPGPLVRELERVVFELEQAVAGR"
     gene            1779..>2447
                     /locus_tag="VLD58_12855"
     CDS             1779..>2447
                     /locus_tag="VLD58_12855"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSB55245.1"
                     /translation="MLSVTLLGTGAACPSIERNVAGLAVAREGETLLFDCGEGTQRQM
                     MRYGVSFAFREIFFTHYHADHMLGVTGLMRTMGLQDRTLPVTLYGPRGAERILGAAIG
                     LGIERNRFPIEIREIAPGDRIAREEYDIVVFPTDHRADTVGYALAEHTRLGRFNPELA
                     RELGVPEGPLWGKLHKGETVELPDGRRVGPADLVGQPRRGRTVVYTGDTRPSPSVVEA
                     ARGAD"
BASE COUNT          403 a          826 c          875 g          343 t
ORIGIN      
        1 cgcgcaggag ctgggcgtga cgagcgtgat ggtgacgcac gacgtgcggg gcgcgttccg
       61 tgtcgccaac cggctggcgc tgctcaccgg cgggaagatc gtgatgcagg ggacgccgga
      121 ggagtttcac gcatccaagc acccgaaggt gaaggagttc ctggagcgcg acttcgacac
      181 tccctcattc gccgcttgag cccatcatgg aactgcgcta cggacgggaa gcgatcgtcg
      241 gagccctcgt gatcatcgcg gtcgcgatct tcgtgggtgg caccatgtgg ctcagcggcc
      301 ggagtctcgg caggcgccac ctggtgaagg cggggttcag gagcgccgcg gggttgaagc
      361 gggcttcgcc ggtcacggtc tcgggagtga cggtggggcg ggtggagaag atcgagctgg
      421 cgcagccggg caaggtgatc gtgtcgatga gcctgcgtcc ggacatcaag ccgaaaaagg
      481 acgcgaaggc ctacatcgcc tcggtgacct tcgtgggcga ttacgtgatc cagttcgagc
      541 cgggggacag cgcggcgccg ttccccgccg actcggtggt gcccggcttg atgaggagcg
      601 acatcggcgg ccgcgccgcc gcgctcagcg accgggccga aagcctcatg gtcgggctca
      661 agtatttcgc caacgagcaa acggcccagg acctccgcgc gtcgctcaag gcgtttcagg
      721 gcacgatgac ggagttccag aagacgctcc ggggcttcag cgatcccaag accggggccg
      781 ggcccgagat cacgcgcacg atgcagtcgc tccagcagct gagcacgcgg ctcgacacca
      841 cgctggcgga ccccgccgtg gccggcattc tccgcaacac cgacacgctc acccgcgacc
      901 tcgccggcat gacccgccag ttcacggcgg tcagctcccg gctcgatacc ctcctgaacg
      961 gcgtcaacca gggccggggc accatgggca agctcacgac cgacagcacc ctgtattacg
     1021 agctccggga cctctccgca gcgatgaagg gactggtggc cgagctgcag aagaacccgg
     1081 ggaagctggg aatcacggtg aaggtgttct gagcatccgc ggcctgccgt cgccatgccg
     1141 accttcgacc cgagccgccg cctctccgcc cgcttcgacc aggcgttcgc gtacgccagc
     1201 ctgctccacg ccagccagac ccggaagggc agccgcacgc cgtacatcgc ccatctgatg
     1261 ggcgtcgcgg cactggtgct ggaggacggc ggcagcgagg acgaggcgat cgccgggctg
     1321 ctgcacgacg cggtggagga ccacccccgc gacggacaca ccgaggagga gatccggctc
     1381 ctcttcggcg aacgggtgct ccgcatcgtg ctcggctgca ccgatgcgtt cgagcacccg
     1441 aagccctcct ggaagaagcg caaggtcgac tatctccaac atctcgctgc cgccccggcc
     1501 gacgtgcgcc gggtctccgc cgcggacaag ctgcacaacg cccgcgcgat gctgcacgac
     1561 taccggcacc agggcgagcg cctctggcgc cggttccacg cgggcaagaa ggaccagctc
     1621 tggtactacc ggagcctggt ggacgtgctg aagaaagggc accgcccggg gccgttggtc
     1681 cgggagctgg agcgggtggt cttcgagctc gagcaggcgg tcgcggggcg gtgagaacgg
     1741 agaagtgagg acttcatcct tctcccttat cttcgggcat gctttcggtc accctcctgg
     1801 gcaccggcgc cgcctgcccc agcatcgagc gcaacgtcgc ggggctcgcg gtcgcgcgcg
     1861 agggcgagac gctgcttttc gactgcggcg agggcaccca gcgccagatg atgcgctacg
     1921 gggtgagctt cgcgttccgc gagatcttct tcacccacta ccacgcggac cacatgctcg
     1981 gggtgaccgg gctgatgcgg acgatggggc tccaggaccg cacgctgccg gtgacgctct
     2041 acggcccgcg cggcgcggag cggatcctcg gcgccgcgat cggcctcggc atcgagcgga
     2101 accggttccc gatcgagatc agggagatcg cccccggcga ccggatcgcg cgggaggaat
     2161 acgacatcgt cgtattcccc accgaccacc gcgcggacac cgtgggctac gcgttggcgg
     2221 agcacacccg gctcggccgg ttcaacccgg agctggcccg ggagctgggg gtgccggagg
     2281 ggccactctg ggggaagctc cacaagggcg agacggtgga gctgcccgac ggccgccggg
     2341 tggggccggc ggacctggtg ggccagccgc gccggggccg gaccgtcgtc tacacgggcg
     2401 acacccgccc gtcgcccagc gtggtggagg ccgcgcgtgg cgcggat
//
LOCUS       DATIFF010000877         1601 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_570451, whole genome shotgun sequence.
ACCESSION   DATIFF010000877 DATIFF010000000
VERSION     DATIFF010000877.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1601
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_570451"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1067)
                     /locus_tag="VLD58_12860"
     CDS             complement(<1..1067)
                     /locus_tag="VLD58_12860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HSB55246.1"
                     /translation="MTHRSDTSGAQPAPAADGYQPDQVEAKWQARWTERRTNETDLDG
                     ATRPFYNLMMFPYPSAEGLHVGNMFAFTGADAYGRFKRLRGWNVFEPIGFDAFGIHSE
                     NYAIKLGINPAELIPRNIENFRRQLRRIGGMFDWRHELSTTDPGYYKWTQWIFLQLFK
                     AGKAYKKAAPVNWCPSCKTVLANEQVINGACERCGTPVEQRTLEQWFFRISDYAQRLL
                     DDLDDKAKMDWSESTTTAQRNWLGRSEGAEIEFPLEHDRAIRVYTTRPDTLFGATFMV
                     LAPEHPLVPELTTAAQRDAVEAYRRLVASKDLVARKVGEREKTGVFTGAFAKNPANGR
                     MIPVWIADYVLMEYGTGAIMAV"
     gene            1204..>1601
                     /locus_tag="VLD58_12865"
     CDS             1204..>1601
                     /locus_tag="VLD58_12865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55247.1"
                     /translation="MRTARLMTLGLVLAVPPAAAQLPRGARFDVVVSRGLRREAVTGR
                     VFVILARDSAPEPRLQAGGVISVPFFGKDVEALRPGTPVVVDRAALGYPLRSLDRLPP
                     GDYYVQALLSPYTKFVRADGHTIWAHMDGW"
BASE COUNT          239 a          536 c          548 g          278 t
ORIGIN      
        1 accgccatga tggcgccggt cccgtactcc atcagcacgt agtcggcgat ccacaccggg
       61 atcatccggc cgttggcggg gttcttcgcg aacgcgcccg tgaagacgcc ggtcttctca
      121 cgctcgccca ccttgcgggc gacgaggtcc ttggaggcga ccaagcggcg ataggcctcg
      181 accgcatccc gctgcgcggc ggtggtaagc tccggcacca gcgggtgctc cggcgccagc
      241 accatgaacg tggcgccgaa cagggtgtcg gggcgggtgg tgtacacccg gatggcccgg
      301 tcgtgctcca acgggaactc gatttccgcc ccttccgagc ggccgagcca gttacgctgg
      361 gcggtggtag tggactccga ccagtccatc ttggccttgt cgtccagatc gtcgagcaat
      421 cgctgggcgt agtcgctgat ccggaagaac cactgctcga gggtccgctg ctccaccggc
      481 gtgccgcacc gctcgcacgc gccattgatg acctgctcgt tggccaggac cgtcttgcag
      541 ctcgggcacc agttgaccgg cgcggccttc ttgtacgcct ttcccgcctt gaacagctgg
      601 aggaagatcc actgggtcca cttgtagtag ccggggtccg tcgtggagag ctcgtggcgc
      661 cagtcgaaca tcccgccgat acgccggagc tgccggcgga agttctcgat gtttcgcgga
      721 atcagctcgg ccgggttgat ccccagcttg atcgcgtagt tctcgctgtg gatgccgaac
      781 gcgtcgaagc cgatcggctc gaagacgttc cagcccctga gccgcttgaa ccgcccgtat
      841 gcgtccgctc cggtgaaggc gaacatgttc ccgacgtgga gcccctcggc cgagggatag
      901 gggaacatca tcaggttgta gaacggcctc gttgcaccgt cgagatcggt ctcgttggtg
      961 cgacgctccg tccaccgcgc ctgccacttg gcctccacct ggtcgggttg atagccgtcg
     1021 gcggccggcg cgggttgggc gccggaggtg tcggagcggt gggtcacagg gtcgccggtc
     1081 ggcatgggcc tgagggaaac gggacggtgt aaatgtagcc gcgccgcagg gttagcgcca
     1141 aggcagcgcc tcgcgacagg atcgattatc atgccgggca tcctcgaata aggccgagcc
     1201 cgcatgcgca ccgcgcgcct catgaccctc gggttggtgc ttgccgtccc gcccgccgcc
     1261 gcccaactcc cgcggggcgc caggttcgac gtcgtagtct cacgagggct ccggcgagaa
     1321 gcggtcaccg gccgggtgtt cgtcatcctg gcgcgggaca gcgcgcccga gccgcggctc
     1381 caggccggcg gcgtgatcag tgtgccgttc ttcggcaagg acgtcgaggc tctccggccg
     1441 ggcacccccg tcgtggtgga ccgggcggcg ctgggctatc cgcttcgctc gctggaccgg
     1501 ctgccgccag gcgactacta cgtccaggcg ctcctgagcc catacacgaa attcgtccgg
     1561 gcagacgggc acacgatctg ggcccacatg gacggatggg a
//
LOCUS       DATIFF010000878         1099 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_415492, whole genome shotgun sequence.
ACCESSION   DATIFF010000878 DATIFF010000000
VERSION     DATIFF010000878.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_415492"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(167..>1099)
                     /locus_tag="VLD58_12870"
     CDS             complement(167..>1099)
                     /locus_tag="VLD58_12870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55248.1"
                     /translation="EKIALRSELEVEDTKVEGGESGGEVALEQAYLDYRFSEAFTLRA
                     GLVLAPIGILNETHEPPTFNGVARPAFDTEVIPATWRDIGIGAVGAIPAAQGLSYRVY
                     LVNGLKADGFAGGTGIRGGRQEGKEASFANPSLTGRVEWARPGLRIAGSFWYGGSAAQ
                     DSILGSGSFAAPVLLLSADGRYDVGPVAFRAEVARITIADAGAINTRFGTDVGRRIDG
                     GYLEGALNLLALAAPGTTQRLNVFVRHERYDLHAAVPAQTVANPAYARRLTTLGLAWK
                     PLWNVVFKADYQFRRNRAHAGEDEVFALGAGWQF"
BASE COUNT          179 a          390 c          370 g          160 t
ORIGIN      
        1 atccggtaga ccggcgggcc ggccccatcg agactgtcac tctgcacttg ctgaccgaag
       61 atccgctcca gcgaggccgc aagcttcttt ggagacgcgg actgcgcggc cgcgcccggc
      121 atggcggcaa gcatcaccaa cgcaaccggc agcaggacgg accgcatcag aactgccagc
      181 ccgcgccgag ggcgaacacc tcatcctcgc cggcatgggc ccggttgcgg cggaactggt
      241 agtcagcctt gaagaccacg ttccagagcg gcttccatgc caggccgagt gtcgtcaggc
      301 ggcgggcgta ggcgggattg gcgacggtct gcgccggcac cgccgcgtgc aggtcgtagc
      361 gttcgtgccg cacgaagaca ttgagtcgct gcgtcgtgcc cggtgcggcg agggcgagca
      421 ggttgagcgc accctcgagg tagcccccgt cgatgcgacg accgacgtcg gtgccgaagc
      481 gggtgttgat cgcgccggca tcggcgatcg tgatgcgcgc gacttccgct cggaacgcga
      541 ccgggccgac atcgtaccgg ccatccgccg agagcagcag gaccggcgcc gcaaagctgc
      601 cgctgccgag gatcgaatcc tgggcggcgc tgccgccata ccagaaggag cctgcgattc
      661 gcagtcccgg acgcgcccat tcgacccgcc cggtgagcga ggggttcgcg aagctcgctt
      721 ccttcccctc ctggcggcca ccgcgaatgc cggtgcctcc cgcgaaccca tccgccttga
      781 gaccgttgac caggtacacc cgatagctga gcccctgcgc agcggggatc gcccccaccg
      841 caccgatgcc gatgtcccgc caggtcgcgg ggatcacctc ggtatcgaag gccggccgcg
      901 ccacgccgtt gaaggtgggg ggctcgtggg tctcgttgag gatgccgatc ggggcgagca
      961 ccagcccggc gcgcaaggtg aacgcctcac tgaaccggta gtcgaggtag gcctgctcca
     1021 gggcgacttc acccccggac tccccaccct cgaccttggt gtcctcgacc tccaattccg
     1081 agcggagcgc gatcttctc
//
LOCUS       DATIFF010000879         5615 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_570624, whole genome shotgun sequence.
ACCESSION   DATIFF010000879 DATIFF010000000
VERSION     DATIFF010000879.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5615
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_570624"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..452
                     /locus_tag="VLD58_12875"
     CDS             <1..452
                     /locus_tag="VLD58_12875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55249.1"
                     /translation="SHGDYVHHHPHGHTPEAHPHDPDRTPVNWLDRHLGEWRGYRALR
                     PLLIGVVHGLAGSAAVALLVLATIQDPRWGLLYLAIFGLGTVLGMMLITLVVALPFAY
                     THRYGPRINLGLRLASGALSLGFGLLLAWEIGVVQGLFGGSPSWMPH"
     gene            complement(460..2169)
                     /locus_tag="VLD58_12880"
     CDS             complement(460..2169)
                     /locus_tag="VLD58_12880"
                     /inference="COORDINATES: protein motif:HMM:NF044955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2207 domain-containing protein"
                     /protein_id="HSB55250.1"
                     /translation="MKRLIGLFLILVLAPPLAAQRSLAIRQFDATILVNKDGTIDVTE
                     TITVHFTGSWNGIYRTIPVEYRTPQGFNWTLRLDFLGATAGPEARALKVESSRERHYL
                     KYKIWVPGAANATHTINLHYRASNGLRFFADHDELYWNITGDEWDVPIEAASAEIQLP
                     AGATGLRAIAFNGAYGSTSRDAVIDTAGTIVRVRMPKGLGFHEGLTAVVGWDKGLIPE
                     PTRAQVAAGFLASNWPLIVPILVFMGMIVLWYQVGRDPRRLPIVVQYEPPSGLTPAEA
                     GTLLDESADMRDITATVVDLAVRGHLKIEERDEDVLFGLFKKKDFVFHRLDGPATPPL
                     EAHERAVYSGIFGALRDVRLSELENQFYKHLPGIQDNIFSRLVNRGLYRSRPDKVKGY
                     WAAGGVVLGMVIVFGGIAIAPKFNLTPLPFLVAGALSGLILVLFGQIMPSRTVGGART
                     LEKVLGFEEFLRRVDGERFERVVKTPEMFEKYLPFAMAFKVERRWAHAFQDIYREPPQ
                     WYVGSTGYRGGFDMGSFSSRLSDMSTRAASTMASSPRSSGGSGFSGGSSGGGGGGGGG
                     GGF"
     gene            complement(2166..2723)
                     /locus_tag="VLD58_12885"
     CDS             complement(2166..2723)
                     /locus_tag="VLD58_12885"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HSB55251.1"
                     /translation="MGLAVVVLLLIVVAGVLIYNSLASLRQLAANAWADIDVQLKRRH
                     DLVPNLVAVVKGHAGYERGTLEKVVEARNRAAAAGGPAQAGVAERELAGSVRQLVALA
                     EAYPDLKAGQSFLELQRSLTEIEDHVQEARRYYNAVVRDLNTRIAQFPVNLIAGPMGF
                     RPREFFGLADESEQASPSVDLGGKP"
     gene            complement(2816..4273)
                     /locus_tag="VLD58_12890"
     CDS             complement(2816..4273)
                     /locus_tag="VLD58_12890"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HSB55252.1"
                     /translation="MRKLSGLPIAVAALGLVLAGCASETPITPRAQYLQPERAALSAG
                     TSYLILGRGNKLPANLESLVTEAGGAVVSTIPAIGVAVATSASPDFSTRAAAGAGIES
                     VAEDQVVQWISPNERVIEAGEVSGEDVGQSSHGNNETFFNLQWAPRAVHAPEAWDAGH
                     IGTGVRVAVLDGGLNNLHIDLNGSVDVAHSRSFVSGFAFNQDVGTFSHATHVAGIIAA
                     QDDGVGTIGIAPGATIIGVKVLHNGSGSFSAVISGMIYAATSIADGGAGANVINMSLG
                     GNFDRQGRGAAQLANALSRAATYAYQHGVTVIASAGNDAIDLDHTDNLITVPAQSTNV
                     ISVAATGPVGFAVGYPNGATDFSRPASYTNFGQSAISFAAPGGDFALPGNALCTLPRI
                     PAGTLTTNCWVFDMVISPASINGSNSGYSFAAGTSMAAPIVAGVAALIIEKNGGSMSP
                     AQVKAALLHSADDLGKPGNDDFYGRGFVNAARAVQ"
     gene            complement(4416..4934)
                     /locus_tag="VLD58_12895"
     CDS             complement(4416..4934)
                     /locus_tag="VLD58_12895"
                     /inference="COORDINATES: protein motif:HMM:NF025701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease complex subunit PrcB family protein"
                     /protein_id="HSB55253.1"
                     /translation="MISSRRLLTLPFVLLAACQAEDHADPGRNLGGNQGTEVPLTRFS
                     ASARGFVQYSGIRAPRQGVVRDSTGWRQLWDEIHANATPAPELPPVDFSRDMVIVAAL
                     GGQPTGGYDVLLKSAVLDDTALTIAVATRHPGAGCILTQAETSPVDLATAPRHEGAVR
                     FVESQEETSCGS"
     gene            5099..>5615
                     /locus_tag="VLD58_12900"
     CDS             5099..>5615
                     /locus_tag="VLD58_12900"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSB55254.1"
                     /translation="MHRPLERFCQLAALLALTATTTQAQMSPMFRGNPAHTGVSAAPL
                     FRGQGGVYWRFRTGGAVRSSPAVTGDRVYAGSGDGYLYAINRATGRLIWRYAAGDAVT
                     ASPAVAAGLVIAATHQGRIFAVRAASGRLVWSRQTGPALPLNTYPAGGWDIWAGSAVV
                     SGTTVVIGGPDG"
BASE COUNT          902 a         1894 c         1906 g          913 t
ORIGIN      
        1 acagtcacgg cgactatgtg caccatcatc ctcatggtca cactcccgag gcccatcccc
       61 acgaccctga ccgtaccccg gtcaactggc tcgaccgcca cctcggcgag tggcgtggct
      121 accgggcgct gcgcccgctc ctgatcgggg tggtacatgg gctggcgggt tcggcggcgg
      181 tcgccctcct ggtgctggcc acgatccagg acccgcgctg gggcctgctc tacctggcga
      241 tcttcggact cggcacggtg ctgggcatga tgttgatcac gctggtggtg gcgctgccct
      301 tcgcctacac ccatcggtat gggccccgga tcaatctggg actccgcctc gcctccggcg
      361 ccttgagcct cggctttggt ctcctgctgg cgtgggagat cggtgtggtc cagggactct
      421 tcggcggatc gccgagctgg atgccccact gaccgggcgc tagaagcccc cgcccccacc
      481 gcctcccccg cccccgccgg aagacccgcc actgaaccct gagccgcccg agctccgggg
      541 cgaggatgcc atcgtgctcg ccgccctcgt cgacatgtcc gacagccggc tcgagaacga
      601 tcccatgtcg aaccctcccc tgtagccggt gctcccgacg taccactgag gcggctcgcg
      661 gtagatgtcc tggaaggcat gggcccatcg gcgctccacc ttgaaggcca tggcaaacgg
      721 caggtacttc tcgaacatct ccggcgtttt caccacccgc tcgaagcgct ccccgtccac
      781 ccgccgcagg aactcctcga agcccagcac cttctccagc gtccgggcgc cacccaccgt
      841 gcgcgacggc atgatctgcc cgaacaggac caggatgagc ccgctcagtg cacccgcgac
      901 caggaacggg agcggcgtca ggttgaattt cggcgcgatc gcgatcccgc cgaagacaat
      961 caccatcccg agcaccaccc cgccggcggc ccagtatccc ttcaccttgt cgggacggct
     1021 tcggtagagg ccgcgattca ccagccgcga gaagatgttg tcctggatac cgggcaggtg
     1081 cttgtagaac tggttttcca gttccgagag gcggacatcg cgcagggcgc cgaagatgcc
     1141 gctgtacacc gcgcgttcgt gggcctcgag cggcggggtg gcaggaccat cgagccggtg
     1201 aaagacgaag tccttcttct tgaagaggcc gaagagcaca tcctcgtccc gctcctcgat
     1261 cttgagatgg ccccgcactg cgaggtcgac gacggtggcc gtgatgtcgc gcatgtcggc
     1321 cgactcgtcg aggagggtcc ctgcctccgc cggggtcagg ccgctggggg gctcgtactg
     1381 cacgacgatc gggagccgcc gcgggtcacg ccccacctga taccagagca cgatcattcc
     1441 catgaacacc aggatgggga cgatcagcgg ccagttgctg gcgaggaagc ccgccgcaac
     1501 ctgggccctg gtgggctccg gaatgagccc cttgtcccac cccacgaccg cggtgagccc
     1561 ttcgtgaaag ccgagcccct tcggcatcct gacccggaca atcgtcccgg ccgtgtcgat
     1621 caccgcatcg cgggaggtcg agccgtacgc gccgttgaag gcgatggccc gaagcccggt
     1681 ggcgccggcc ggcagctgga tctccgcgct ggccgcctcg atcggcacgt cccactcgtc
     1741 accggtgatg ttccagtaga gctcatcgtg atcggcgaag aagcggagcc cgttgctggc
     1801 ccggtagtgc aggttgatcg tgtgggtcgc gttcgccgcc cccggtaccc agatcttgta
     1861 cttgagatag tgccgctcgc gcgagctctc gaccttgagc gccctggctt cgggcccggc
     1921 ggtggcgccg aggaagtcga gccggagagt ccagttgaaa ccctggggtg tgcggtactc
     1981 gacgggaatg gtgcggtaga tcccgttcca cgatccggtg aagtgaaccg tgattgtctc
     2041 ggtgacgtcg atcgtcccat ccttgttgac caggatggtg gcgtcgaact ggcggatggc
     2101 gagcgagcgc tgggccgcga gcggcggcgc cagcacgagg atcaggaaga gcccgatgag
     2161 ccgcttcatg gcttgcctcc caggtcgacc gagggcgacg cctgctcgct ttcatcggcc
     2221 aggccgaaga actcccgggg gcggaatccc atcggcccgg cgatcaggtt gaccgggaac
     2281 tgggcgatgc gggtattgag gtcgcggacc acggcgttat agtagcgccg tgcttcctgg
     2341 acgtgatctt cgatctcggt gagactccgc tggagctcga ggaagctctg cccggccttg
     2401 aggtcgggat atgcctccgc cagcgccacc agctgccgca ccgacccggc cagttcccgc
     2461 tcggccacgc ccgcctgggc cgggccaccc gcggcagcgg cccggttccg ggcctccacc
     2521 actttctcga gcgttccgcg ttcgtacccg gcgtggcctt tcacgacagc gaccaggttg
     2581 gggaccaggt catgccggcg cttgagctgc acgtcgatgt cggcccaggc attggcggcg
     2641 agctgacgga gactcgccag gctgttgtag atgaggacac cggcgaccac gatcaggagc
     2701 aggaccacga cggcgaggcc catgggcaat cctctcgagc ggtgcgggac gcctgaaggc
     2761 taacgaaagg ggccccggaa cggggcccct tggtgctgcg gagactgcgc ccggcctact
     2821 gcacggcccg cgcggcgttg acgaagccgc ggccgtagaa gtcgtcgtta cccggcttgc
     2881 cgagatcgtc ggccgaatgg agcaacgccg ccttgacctg ggccggggac atcgagccgc
     2941 cgttcttctc gatgatgagc gcggccacgc cggccacgat gggcgccgcc atgctggtgc
     3001 ccgccgcgaa cgagtagccc gagttactgc cgttgatgct ggccgggctg atcaccatgt
     3061 cgaacaccca gcagttggtg gtcagcgtgc cggcgggaat gcgcggcagg gtgcagaggg
     3121 cgttgcccgg cagcgcgaaa tcgccgcccg gggcggcaaa gctgatcgcc gactggccga
     3181 agttggtgta cgacgctggc cgggaaaaat ccgtggcgcc gttgggatag ccaaccgcga
     3241 agccgaccgg gccggtggcc gcgaccgaaa tcacgttggt ggactgcgcc ggcaccgtga
     3301 tgaggttgtc ggtgtgatcg aggtcgatgg cgtcgtttcc cgccgaggcg atcaccgtca
     3361 ctccgtgctg gtaggcgtag gtggcggcgc ggctcagggc attcgcgagc tgggctgcgc
     3421 cccgcccctg ccggtcgaag ttaccgccca ggctcatgtt gatgacgttg gctccggcgc
     3481 cgccgtcggc gatcgaggtg gcggcataga tcatcccgga gatcaccgcg ctgaacgacc
     3541 cgctgccgtt gtgcagcacc ttcaccccga tgatggtggc gcccggcgcg atgccgatgg
     3601 tgccgacacc gtcatcctgg gccgcgatga tgcccgccac gtgggtggcg tgggagaagg
     3661 tgccgacatc ctggttgaac gcgaaacccg aaacgaagga gcgggagtgg gccacgtcga
     3721 cgctgccgtt gaggtcgatg tgcaggttgt tgagcccgcc atcgagcacc gccacccgga
     3781 ccccggtacc gatgtgtccg gcatcccacg cctcgggcgc gtgcaccgcc ctgggcgccc
     3841 actggaggtt gaagaaggtc tcgttgttgc cgtggctcga ctggcccacg tcctcaccgg
     3901 agacctcgcc cgcctcgatc acccgttcgt tcgggctgat ccactgaacc acctggtctt
     3961 cggcgaccga ttcgatgccc gcgcctgccg ccgccctggt gctgaagtcg ggactcgccg
     4021 acgtcgccac cgcgaccccg atggcgggaa tggtgctcac cactgctcca cccgcctcag
     4081 tcacgaggga ttcgaggttg gccggcagct tgttgccccg gccgaggatc agataggagg
     4141 tgccggcact gagcgcggcc cgttccggct ggaggtactg tgccctgggc gtgatgggcg
     4201 tctcggaggc gcacccggcc agaacgagac ccagcgcggc cacggcgatc ggaagaccag
     4261 agagctttcg caagcagacc tccagagggt gggggcggac cacggtcgca ctcgcgccgg
     4321 agagggagag caccgaagag acgccatcta ttgtgtgcgg gggagcggcc cctaatgtcg
     4381 gggccgctgg tcaatccggc aagaggcctg tcgggtcagg atccgcagga ggtttcctcc
     4441 tgcgactcga caaatcggac tgcgccctcg tggcgcggcg ccgtggcaag atcgaccggg
     4501 ctggtttcgg cctgggtaag aatacagccc gccccgggat gcctggtggc gaccgcgatc
     4561 gtcagggcgg tgtcgtccag gaccgcgctc ttgagcaaaa cgtcataacc gccagttggc
     4621 tggcctccga gagcggcgac aatgaccatg tcccgactga agtcgactgg aggaagttcg
     4681 ggtgcgggag tggcgttcgc gtgaatttca tcccacagct gccgccaccc ggtggaatcc
     4741 cgaacaacgc cctgccgcgg cgccctgatt ccactgtact gcacgaaccc cctggcgctt
     4801 gcactgaacc gggtcagcgg cacctcggta ccctgattcc cgccgaggtt cctgcccgga
     4861 tcggcgtgat cttcggcctg acatgcggcg aggaggacga atggcagcgt gagcaggcgg
     4921 cgagaggaga tcatgggagg cctcgcggaa acgaacggga cgacggactc gctcccgaat
     4981 gtgggaccgg ggttccgcga ctgcaatacc acaccagaag tagcagtcat ggaaccggta
     5041 cccgacccgt tcgtacagag tctcgcccgc ctgacccagc gacccggagc actctcgcat
     5101 gcatcgcccg cttgaacgtt tctgccagct cgcggcactt ctcgcgctca ccgcgacgac
     5161 cactcaggct cagatgagcc cgatgttccg gggaaatcca gcgcataccg gcgtgtctgc
     5221 tgcgccgctc ttccggggcc agggcggagt ctactggcga ttccggaccg gtggagccgt
     5281 gcgaagctct ccggcagtca cgggagaccg ggtgtacgcc ggcagcggcg acggatacct
     5341 ctacgccatc aaccgtgcga ccggccgcct gatctggcgc tatgccgcgg gcgacgcggt
     5401 gacagcctcc cccgccgtgg cggctggtct ggtgatcgcc gccacccacc aagggcgaat
     5461 cttcgcggtg cgggcggcca gcggccggct ggtctggtcg cggcagacgg gcccggccct
     5521 cccactcaac acctatcccg ccggcggatg ggacatctgg gccggctccg cagtggtgag
     5581 cgggaccacc gtggtgatcg ggggaccgga tggga
//
LOCUS       DATIFF010000880         1587 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_109097, whole genome shotgun sequence.
ACCESSION   DATIFF010000880 DATIFF010000000
VERSION     DATIFF010000880.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109097"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            4..99
                     /locus_tag="VLD58_12905"
     CDS             4..99
                     /locus_tag="VLD58_12905"
                     /inference="COORDINATES: protein motif:HMM:NF018161.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55255.1"
                     /translation="MEKQKEGKKKMKQLGQVEIPQEAFLAVLQVE"
     gene            96..1085
                     /gene="waaF"
                     /locus_tag="VLD58_12910"
     CDS             96..1085
                     /gene="waaF"
                     /locus_tag="VLD58_12910"
                     /inference="COORDINATES: protein motif:HMM:TIGR02195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HSB55256.1"
                     /translation="MTGHTLVIQTAFLGDVVLTLPLIQQLADQFGPVDVVVTPEAEPL
                     ATGQPAVRRAIVYDKRGADRGVAGFRKMARLLRAKRYQRAFLPHRSLRSALLVRQAGV
                     PERTGFAGGIAGLLHTRSVARAETGHESERLAALAPAPAPVAAPWLVLGSTDRERAAA
                     WLTASGIGPPYVVLAPGARWATKRWPGFPALAREFEHPVVVIGGPDDRAAASAIVAAA
                     PNGRSAAGELSLLQSAALIERAALVVSNDSVALHLAVALGRPVLGVAGPTGPASGFEP
                     PPGAGGIVAHPELACRPCSRHGHDRCPLGHHRCMTELEPATVLSAVTAALTHL"
     gene            1187..>1587
                     /locus_tag="VLD58_12915"
     CDS             1187..>1587
                     /locus_tag="VLD58_12915"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HSB55257.1"
                     /translation="MRFIVGIDLGGTNIVSGCVSEDGSVLHGVRSVPTGAEEGPDAVV
                     RRIIQAAKESMAELKKAMPDAELIGIGVGAPGPLDTKSGIVLLTPNLGWVNMPLRARL
                     QEGLGLKTALDNDANCAILGEWWQGAARNTR"
BASE COUNT          237 a          598 c          516 g          236 t
ORIGIN      
        1 ctgctggaga agcagaagga aggtaagaag aagatgaagc agctcgggca ggtggaaatc
       61 ccgcaggagg cgttcctggc ggtgctgcag gtcgaatgac cgggcatacc ctcgtcatcc
      121 agacggcctt tctgggcgac gtcgtcctca cccttcctct cattcagcag ctggcggatc
      181 agttcggccc ggtggatgtc gtggtcaccc ccgaggccga gccgctcgcc acgggacagc
      241 ccgcggtccg gcgggccatc gtctacgaca agcgcggcgc cgacaggggc gtggccggtt
      301 tccggaagat ggcccggctg ctgcgcgcca agcgctacca gcgtgccttc cttccccatc
      361 gatccctgcg ctcggcgctg ctggtgcgcc aggcgggggt tcccgagaga accgggttcg
      421 ccggaggcat cgccggcctg ctgcacactc gcagcgtggc acgagcggag accggtcacg
      481 agagcgagcg gctcgccgcg ctcgcacctg cccctgcgcc ggtcgccgca ccctggctgg
      541 tgctcggctc caccgatcgg gagcgcgccg cggcctggct gaccgccagc ggcatcggac
      601 cgccttatgt cgtcctcgct cctggcgccc gctgggccac caagcgctgg ccgggttttc
      661 ccgccttggc ccgcgagttc gagcacccgg tcgtggtgat cggcgggccg gacgatcgcg
      721 ccgccgcgag tgccatcgtg gccgcggcgc ccaacgggcg gagcgcagcc ggcgagctct
      781 cgttgctgca atccgcggcc ctcattgagc gggcagcgct ggtagtcagc aacgattccg
      841 tggcgctgca cctggccgtc gcactgggcc ggccagtact cggtgtggcc ggtccgaccg
      901 gccccgcatc cggcttcgag ccaccccccg gcgccggcgg catcgtcgcc caccccgagc
      961 tagcctgtcg cccctgctcc cgccacggac acgaccgctg cccgctcggg caccaccgct
     1021 gcatgacaga gctggaaccc gccacggtgc tctccgctgt aacggctgcc ctcacgcatc
     1081 tgtagtcgcc ccaagccccc aagccccaag gccacactcg acccccgcct cccgtcgttc
     1141 tatcattact gccagtcaac ctccccagcc cctgtccccg acccacatgc gattcatcgt
     1201 cggcatagac ctcggcggca ccaacatcgt ctccggctgc gtctcggagg acggctcggt
     1261 gctgcacggt gtgcgctctg tccccaccgg cgccgaggaa ggacccgacg ccgtggttcg
     1321 ccggatcatc caggcggcca aggagagcat ggccgagctc aagaaggcga tgccggacgc
     1381 cgagctgatc ggcatcggcg tcggagcacc aggcccgctc gacaccaagt ccggcatcgt
     1441 gctcctcacc ccgaatctcg gctgggtgaa catgcccctc cgggcccggc tccaggaggg
     1501 cctcggtctc aagaccgcgc tcgacaacga cgccaactgc gccatcctgg gtgagtggtg
     1561 gcagggcgcg gcacgcaata ccaggaa
//
LOCUS       DATIFF010000881         1614 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_415877, whole genome shotgun sequence.
ACCESSION   DATIFF010000881 DATIFF010000000
VERSION     DATIFF010000881.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_415877"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..518)
                     /locus_tag="VLD58_12920"
     CDS             complement(<1..518)
                     /locus_tag="VLD58_12920"
                     /inference="COORDINATES: protein motif:HMM:NF012550.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HSB55258.1"
                     /translation="MPGRTLFGKLWDAHLVYQNEGGPGLLYVDLHLVHEVTSPQAFEG
                     LRLAGRRVRRPDLTIATVDHNVPTGDRSLPIADPISRRQVDFLIENARAYGIELYDLS
                     SSRQGIVHVIGPELGATQPGMTIVCGDSHTSTHGAFGALAFGIGTSDVEHVLATQTVL
                     FPRPRTMEARFSG"
     gene            complement(520..>1614)
                     /gene="ilvC"
                     /locus_tag="VLD58_12925"
     CDS             complement(520..>1614)
                     /gene="ilvC"
                     /locus_tag="VLD58_12925"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: protein motif:HMM:NF004017.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HSB55259.1"
                     /translation="LPMTAQSDRATPGPRIYYDRDADPSRLKGRTIAIIGYGSQGHAH
                     ALNLRDSGARVVVGLRPGGNSWKKAEAAGLQVVSVADAARAADVIMMLVPDQDGRTIY
                     DESVAPVLSKGKTLMFAHGFNIHFKEIAPPADVDVSMIAPKSPGHLVRSEFEGGRGVP
                     GLVAIHQDASGQALANALAYAAGIGCTRAGVIETSFREETETDLFGEQAVLCGGATAL
                     IKAGFETLVAAGYRPEMAYFECLHELKLIVDLIYRGGLGFMRYSISDTAEYGDYTRGP
                     RIVTDETRAEMKRILTEIQTGSFAKEWLAEHRSGGKNFARMRQADANHQIEVVGRQLR
                     AMMPWSEEGKAKAAAAEAPRVGAPTPAPVG"
BASE COUNT          259 a          536 c          550 g          269 t
ORIGIN      
        1 ccgctgaagc gcgcttccat cgtgcgggga cggggaaaga gcaccgtctg ggtggcgagc
       61 acatgctcga cgtcgcttgt gccgatgccg aaggccaggg cgccaaaggc gccgtgggta
      121 ctggtgtggg aatcgccgca gacgatcgtc atcccgggct gggtggcgcc cagttcggga
      181 ccgatcacgt gcacgatgcc ctggcgcgag gaggagagat cgtagagctc gatgccgtag
      241 gcccgggcat tctcgatcag gaaatccacc tggcggcggg agatcgggtc ggcgatcgga
      301 aggctccggt cgccggtcgg cacgttgtgg tcgaccgtgg cgatggtgag atcgggacgg
      361 cgcacccgcc ggccggccag gcgcagacct tcgaacgcct ggggcgaagt gacttcatgc
      421 accaggtgga gatccacgta aagcaggccg ggcccaccct cgttctgata aacgaggtgg
      481 gcatcccaga gcttgccgaa gagagtcctg ccgggcatct cagcccaccg gcgccggcgt
      541 gggagcaccc acgcgcggcg cttcggccgc agccgctttg gccttcccct cttccgacca
      601 aggcatcatg gcgcggagct gccggcccac cacctcgatc tggtggttgg cgtcggcctg
      661 ccgcatccgg gcaaagttct tcccgccact gcggtgctcg gccagccact cctttgcgaa
      721 gctcccggtc tggatctcgg tcaggatccg cttcatctcg gcccgggtct cgtcggtgac
      781 gatccgcggc ccacgggtat aatcgccgta ttccgcggta tcgctgatcg agtagcgcat
      841 gaagccgagc ccgccacgat agatcaggtc gacgatcagc ttgagctcgt ggagacactc
      901 gaagtatgcc atctcgggac gatagccggc cgccaccagg gtctcgaaac ccgccttgat
      961 gagcgcggtg gcgccgccgc agagtacggc ctgctcgccg aagaggtcgg tttcggtctc
     1021 ttcccggaac gaggtctcga tcacgccggc gcgggtgcag ccaatgcccg cggcatacgc
     1081 cagcgcattc gccagggcct gaccgctggc atcctgatga atcgccacca gcccgggaac
     1141 gccacgacca ccctcgaact cgctccggac caggtgcccc ggcgacttgg gcgcgatcat
     1201 cgagacgtcg acgtcggccg gcggggcgat ttccttgaaa tggatgttga acccgtgggc
     1261 gaacatcagg gtcttgccct tgctcaggac cggcgccacc gactcgtcat agatggtgcg
     1321 gccgtcctgg tcgggcacca gcatcatgat gacgtccgcg gccctggcgg cgtcggccac
     1381 cgagacgacc tggagcccgg ccgcttcggc cttcttccag ctgttgcctc ccggacggag
     1441 gccgacgacg accctggcgc cgctatcccg cagattgagg gcgtgcgcat ggccctggct
     1501 gccgtagccg atgatcgcga tcgtccgacc cttgagccgg ctggggtcgg cgtcccggtc
     1561 atagtagatc ctcgggccgg gagtggcgcg gtcgctctga gcagtcatcg gaag
//
LOCUS       DATIFF010000882         2909 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1340158, whole genome shotgun sequence.
ACCESSION   DATIFF010000882 DATIFF010000000
VERSION     DATIFF010000882.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2909)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2909)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2909
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1340158"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1226)
                     /locus_tag="VLD58_12930"
     CDS             complement(<1..1226)
                     /locus_tag="VLD58_12930"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB55260.1"
                     /translation="MTAPSELFGRLQAALGSQYRLERELGHGGMGVVFLARDTTLDRP
                     VAVKVVHPDLAVHASITQRFLAEARMIARLRHPSIVAIHTAGETTGVFYYVMDYVPGE
                     SLRQRLTREGRLPIDEVIRIVADLADALNAAGKAGLVHRDVKPENILLDQASGRAMLA
                     DFGIARAMAADADGVRTGQGVAVGTPTYMSPEQAAGDSVDTRSDLYALAVVAYEMLAG
                     RPPFRAQTAAAVATMHLAERPVAVGSLRSGVPAALSEAIMRALAKDPADRWQTGAEFR
                     EAVLSDRVGVRPSRTGSRRWAYAMVAAAAAVALLVGLAFRPSGPPRGVNPRHSILVLP
                     FDNLRQDPAVDWLRDGSVNMLALNLSQWTDLTVVDHERLHDLLERRKVDNRQPVGLEM
                     ARRLARDAGVWTVALG"
     gene            1421..2272
                     /locus_tag="VLD58_12935"
     CDS             1421..2272
                     /locus_tag="VLD58_12935"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSB55261.1"
                     /translation="MPATLVSSPPRPPLIAAVLRPEERTRVEAAGTGWFSLVHGETIP
                     DAIRSVRERPVDAVLLSVHRCGGELDALGHLVRGFPGIPTVALVSRHDAEGSEALLHL
                     GASGVRQVVDVTGPEGWHRLRQILGQPVTRDVARIQQPVLLALGDIPPDTRLFFEALI
                     RLAPDMPTARQLAERVGVRCTTLMSRFGRSGLPSPKSYLAAMRLVHAALFFERPGYTV
                     ADVAYRLDYSSPQSFGRHVRTLLGITSSELRRRFPFEQAVGRFIEVMIEPYREVWPGF
                     RPLVRKD"
     gene            complement(2395..>2909)
                     /gene="pyrE"
                     /locus_tag="VLD58_12940"
     CDS             complement(2395..>2909)
                     /gene="pyrE"
                     /locus_tag="VLD58_12940"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HSB55262.1"
                     /translation="VKRGRFVLASGRTSSFYVDCRLTTMSAEGLVLIGRLGLEAIREQ
                     GWAPRGVGGLTMGADPVAYAVAARSAAAPPILDGFSVRKEAKAHGTGRRVEGNFASGD
                     PVVVVEDVITTGGSALKAIEAIREEGGVVLGILAVVDREEGGRATLEAAGHSVVALTT
                     ATRLGLRSEK"
BASE COUNT          406 a         1070 c          960 g          473 t
ORIGIN      
        1 tcgcccagcg ccacggtcca gacgccggca tcccgcgcca gccgccgtgc catctcgagg
       61 ccgaccggct ggcggttgtc caccttgcgg cgctccagca ggtcgtgcag ccgctcgtga
      121 tcgaccacgg tgagatcggt ccactgcgac aggttgagcg ccagcatgtt gacgctgccg
      181 tcgcggagcc agtccaccgc cggatcctgc cgcaggttgt cgaacggcag caccaggatc
      241 gagtggcgtg gattgacgcc ccggggcggg cccgagggcc ggaacgccag gccgaccagg
      301 agcgccacgg ccgccgcggc tgcgaccatg gcgtacgccc agcggcgcga gccggtgcgt
      361 gagggccgga cgccgacccg gtcggagagc accgcctcgc ggaattccgc gccggtctgc
      421 cagcgatcgg cgggatcctt ggcgagcgcc cgcatgatgg cctcgctgag cgccgcgggc
      481 acgccgctgc gcagcgagcc caccgcgacc ggccgctcgg ccaggtgcat cgtcgccacc
      541 gcggccgcgg tctgggcccg gaagggcggc cgaccggcga gcatttcgta ggcgaccacc
      601 gcaagggcgt agagatcgct ccgggtgtcg acgctgtcgc cggcggcctg ctccggactc
      661 atgtaggtgg gggttcccac cgccacgccc tggccggtgc ggacgccgtc tgcgtcggcc
      721 gccatggccc gcgcaatgcc gaagtccgcc agcatcgccc ggcccgaggc ctgatcgagc
      781 aggatgttct ccggcttcac gtcgcggtgc accaggcccg ccttgccggc ggcgttgagc
      841 gcgtcggcga ggtcggccac gatccggatc acctcatcga tcggcagacg cccttcgcgg
      901 gtgagccgct gccggaggct ctcccccggc acgtagtcca tcacgtagta gaagacgccg
      961 gtggtctcgc cggcagtgtg gatggcgacg atactggggt gccggagccg cgcgatcatc
     1021 cgtgcttcgg ccaggaagcg ctgggtgatg ctggcatgga ccgcgagatc ggggtgcacc
     1081 accttcacgg cgaccgggcg gtcgagggtg gtgtcccgcg ccaggaagac cacgcccatc
     1141 ccgccatgcc ccagctcccg ctcgagtcga tactgcgacc cgagcgccgc ctgcaaccgg
     1201 ccaaagagct ccgaaggcgc cgtcacgcgg aatccgtgga agttgtgcta gggtaagata
     1261 gggccgcctc aggggacgag tcaccccgac gtgaatggac ggatcctgat ctgattagga
     1321 cgcttttggc cccgggatgg ttgcagggtg cgccacgggt ggcttgaccg gaggttgagc
     1381 atcccttcct aggttcgggc cgtcctctcg ggagccgccc gtgcctgcca ccctggtctc
     1441 ttcgccaccc cgcccgccgc tcatcgccgc ggtcctccgc ccggaggaac ggacccgggt
     1501 ggaagccgcc ggcaccgggt ggttctccct ggtccacggc gaaacgatcc ccgacgccat
     1561 ccgctcggta cgggaacgcc cggtcgacgc ggtactgctc tcggtacacc gctgtggcgg
     1621 ggagctcgac gcgctgggcc acctggtgcg cgggttcccc ggcatcccta ccgtcgccct
     1681 ggtaagccgc cacgatgccg agggctccga agcgctgctc cacctcggcg ccagcggcgt
     1741 acgccaggta gtcgatgtca ccggccccga gggctggcac cgtctccgcc agattctcgg
     1801 gcaaccggtg acgcgagatg tcgcccggat tcagcagccg gtgctgctcg ccctcggtga
     1861 tatcccacct gatacgcggc tcttcttcga ggcgctgatc cgcctcgccc ctgacatgcc
     1921 gaccgcgcgg cagctggccg aacgggtggg ggtgcgctgc accacgctca tgagccgctt
     1981 cggacgctcg gggcttccct cacccaagag ctacctcgcc gccatgcggc tggttcacgc
     2041 cgcactcttc ttcgaacgcc ccggttacac cgtggcagac gtggcgtacc ggctggatta
     2101 ttcctcgccc cagagctttg gccgccacgt gcgcaccctg ctcggcatca ccagctccga
     2161 gctccggcgc cgctttccct tcgagcaggc cgtgggtcgg ttcatcgaag tgatgatcga
     2221 gccgtaccgg gaggtgtggc cgggattccg gccgctggtg cggaaggact aggtgggtct
     2281 cagctggctg ggcgactgcg gggaaggcgc tacacgggag tgtactcctc ctaactcctt
     2341 actcctactt tctcccttct cccttctccc ttcttacttc ttacttctcc cttctcactt
     2401 ctcactcctt aacccgagcc tcgtggcagt cgtcagcgct actacgctgt gcccggcagc
     2461 ctcgagcgtg gcccgtcctc cttcctcgcg gtccaccact gccaggatac ccagcaccac
     2521 cccgccctcc tcccggattg cctcgattgc cttgagggct gagccgcccg tggtgatcac
     2581 atcctcgacc accaccacag gatcgccgga ggcgaagttc ccttcgaccc ggcggcccgt
     2641 gccgtgcgcc ttggcctcct tgcgtacgct gaacccgtcc agaatcggtg gcgccgccgc
     2701 gcttcgggct gccacggcgt aggccaccgg gtcggcgccc atcgtcaggc cgcccacgcc
     2761 gcggggcgcc catccctgtt cccggatggc ttcgagtccc agccggccga tgagcaccag
     2821 cccttccgcc gacatcgtgg tcaggcggca atcgacgtag aaactggagg tgcggcctga
     2881 ggcgaggaca aaccggccgc gcttcaccg
//
LOCUS       DATIFF010000883         1347 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1955448, whole genome shotgun sequence.
ACCESSION   DATIFF010000883 DATIFF010000000
VERSION     DATIFF010000883.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1955448"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1324)
                     /locus_tag="VLD58_12945"
     CDS             complement(<1..1324)
                     /locus_tag="VLD58_12945"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HSB55263.1"
                     /translation="MLPLLLPALLCAQSAPDTNYAGAIRYIDAAARELLTEDGTPGLA
                     LALVADGEIIGVKTYGYADLGTRAPVLPDTRFLAGSVSKAFTAVALLQLQEEGLVDVA
                     RPVADYLPWFKVRSRFPAITLHHLLTHTAGLPRDRSDLPSSPYTALALRDREMAAAPG
                     SRFAYSNIGYQLLSLVIEEVEGRPFAEAIRRRVLEPTGMTRSQAEVTQAARLTSATGY
                     QYLYDDRPPAPGDPLVAASWGEYSAGDANIITTAPDLARFLVGLLAQGGEGTQRLLQP
                     VSFARMVQRTVPAPELGPAAFYGYGVILGMRNGDPVLWHSGAVAGFRSMLLGDADERV
                     GVVVLMNGPGNPRRLAEYALDVLIAKRRARPFPPVLETPSSEIIPNAGEYAGRFTDSA
                     GVVVEVQRDGARLWLIDGARRIPLLRGGEPDQLFARDSAWARFPVRFGR"
BASE COUNT          253 a          442 c          466 g          186 t
ORIGIN      
        1 gccgcccgaa gcgtaccgga aagcgcgccc aggccgagtc gcgggcgaag agttgatccg
       61 gttcgccacc tcgcagcagg ggaatgcggc gtgctccatc gatgagccag agcctggcgc
      121 catcacgctg gacctcgaca accacacccg cgctgtcggt gaaccgaccg gcatactcgc
      181 cggcatttgg aataatctcg gatgacggcg tctccagcac tggagggaat ggccgtgccc
      241 gccgctttgc gatcagcaca tcgagcgcat actcggccag gcggcgcgga ttgccagggc
      301 cgttcatcag caccaccacc cccacccgct catcggcgtc gcccagcagc atcgaacgga
      361 acccggcaac ggcgccgctg tgccaaagca ccggatcgcc gtttcgcatc ccgagaatga
      421 cgccatagcc gtagaaggcg gcaggcccga gttcaggagc gggaacggtg cgctgaacca
      481 tgcgggcgaa gctcaccggc tggagcaagc gctgagtgcc ctcaccaccc tgagcgagga
      541 gaccgacgag gaaccgggcg aggtcgggag cggtggtaat gatgttggcg tcaccggcgc
      601 tgtactcccc ccaggaagcg gcaaccagcg gatcgccggg cgcgggcgga cgatcgtcgt
      661 agaggtactg atatcccgtc gcgctggtga gccgggccgc ctgggtcacc tcggcctgac
      721 tccgcgtcat gcccgtcggc tcgagcaccc ggcgccggat tgcctcggcg aagggacgac
      781 cctcgacctc ctcgatcacc aggctcaaca gctgataccc gatgttggaa taggcgaacc
      841 ggctgcccgg agcggcggcc atctcccgat cccggagcgc cagcgcggta tagggcgaac
      901 tgggcagatc gctccggtcg cgcgggaggc ccgcggtatg ggtcagcagg tgatgcaggg
      961 tgatggcggg aaagcgggac cggaccttga accaggggag atagtcagcg accgggcggg
     1021 ccacatccac cagtccctct tcctgtagtt gaagcagcgc caccgcggtg aacgccttcg
     1081 agacggatcc ggcgaggaac cgggtatcgg gcagcaccgg agccctggtg ccgaggtcgg
     1141 catagccgta ggtcttcacg ccgatgatct cgccgtcggc gacgagggcc agcgccagcc
     1201 cgggagtgcc gtcctccgtg agcagctccc gcgcagcggc atcgatgtac ctgatggcgc
     1261 cggcgtagtt tgtgtcaggc gccgactggg cgcaaagcag cgcaggaagg aggagcggga
     1321 gcacgctcat acgcggtgtt acaaaca
//
LOCUS       DATIFF010000884         1126 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2262928, whole genome shotgun sequence.
ACCESSION   DATIFF010000884 DATIFF010000000
VERSION     DATIFF010000884.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2262928"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            114..872
                     /gene="rlmB"
                     /locus_tag="VLD58_12950"
     CDS             114..872
                     /gene="rlmB"
                     /locus_tag="VLD58_12950"
                     /inference="COORDINATES: protein motif:HMM:TIGR00186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HSB55264.1"
                     /translation="MPIPEPVETIVGRNAILEVLRAGRRRCLRLFVAEGAELRGSGVE
                     LVERAAAAGIPVERVARARLTEDGRSHAVSAEVEPYPYSDLAEILERVGASGEPALVL
                     LLDAVQDPQNLGTLLRTAEAVGVHGVILPYRQSVGVTPAVVRASSGASEHLLVGRENL
                     ARAMSTLKEQGAWMVGLDMAPQAERLDQVDLRRPLGLVVGSEGSGLRRLVRESCDVLA
                     RLPMRGRVGSLNAAVAGSVALYAAWLQRASGGAH"
     gene            950..1021
                     /locus_tag="VLD58_12955"
     tRNA            950..1021
                     /locus_tag="VLD58_12955"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:982..984,aa:Thr,seq:tgt)
BASE COUNT          168 a          316 c          453 g          189 t
ORIGIN      
        1 cgagcaaggg atcgcgctcg aggacggcaa ggacggcacg cgctggtcga tcggctgaga
       61 gctgaccgcg accgcgggcg gcggacggcc gagggccgga gtcctcgtct gaaatgccaa
      121 tcccagagcc agtcgagacg atcgtagggc ggaatgccat cctcgaagtg ctgcgcgccg
      181 ggcgacggcg ttgtctccgg ctgttcgtcg ccgagggggc cgagctgcgc ggctcggggg
      241 tcgagctcgt cgaacgggcg gcggcggcgg ggatcccggt ggagcgagtc gccagggcgc
      301 gcctgaccga ggatggccgg tcccatgcgg tgtcggccga ggtcgagccc tatccttaca
      361 gcgatctggc cgagatcctc gagcgagtcg gggccagcgg cgagccggcc ctggtgctgt
      421 tgctcgacgc cgtgcaggat ccccagaacc tggggacctt gctgcgcacg gccgaggcgg
      481 tgggcgtaca cggggtgatc ctgccgtacc ggcaaagtgt gggagtgacg ccggcggtgg
      541 tgcgggcttc ctccggtgcg agcgagcatc tgctggtggg gcgggagaat ctggcccggg
      601 cgatgagcac gttgaaggaa caaggggcct ggatggtcgg gctggacatg gcgccgcagg
      661 ctgagcggct ggaccaggtg gacctgcgtc gccccttggg gctggttgtc ggaagcgaag
      721 ggtcgggcct gcgccgcctg gtgcgcgaat cctgcgacgt gctggcgcgg ctgccgatgc
      781 gggggcgggt cggatcgctg aatgcggcgg tcgccgggtc ggtggcgctg tatgcggcct
      841 ggttacagcg ggcctcgggg ggcgctcatt gacgctcctg gggaatcctg ataccatggc
      901 ggttcggctg gaccgtcgcg ccgggggtag gggcgcgttt ttgacgtgtg ccgacgtagc
      961 tcaacggaag agcaaccgcc ttgtaagcgg taggttatgg gttcgattcc catcgtcggc
     1021 ttgttagtcg gatagtttgg tagtcagtta gtcgccaccg gcgaattggc gataaggcta
     1081 taggactgcg agactaacac accaagcacg ggcggttacc caagtg
//
LOCUS       DATIFF010000885         4573 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1494818, whole genome shotgun sequence.
ACCESSION   DATIFF010000885 DATIFF010000000
VERSION     DATIFF010000885.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4573
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1494818"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1064
                     /locus_tag="VLD58_12960"
     CDS             <1..1064
                     /locus_tag="VLD58_12960"
                     /inference="COORDINATES: protein motif:HMM:NF012973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009306 - protein secretion [Evidence IEA];
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA];
                     GO_process: GO:0071978 - bacterial-type
                     flagellum-dependent swarming motility [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HSB55265.1"
                     /translation="AEPAPIKDLLQVEPLEVEVGYALVPLVDEAQKGDLLQRIGLMRK
                     QLALELGIIVPPARIRDNIQLPATEYAIKLRGVRVASGEVLPRYLLALDTAGLASPID
                     GIRTTDPSFGLPAVWITPDRRVEAEANGYSVVEPQTVLSTHLMETIKHHAADLLSRQN
                     VRELLDALKETHPALVDDTIPAKLSLGSVHRVLQRLLREGIPIRDLALILETLSDGAE
                     VTKDPEALTEQVRRTLSTVLVQIFDDGDGSISGITMGPRLEAALMGLFSPRPAREGGR
                     GIEPEELTSALRSLNDLMNRYKRDGQYRPLITPPALRIGVRRLVEPVLPHLPVLSLGE
                     LPAQTPIHSLATWELSRAA"
     gene            1054..1929
                     /locus_tag="VLD58_12965"
     CDS             1054..1929
                     /locus_tag="VLD58_12965"
                     /inference="COORDINATES: protein motif:HMM:NF012662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55266.1"
                     /translation="MPLESFIGPAVDALLAQARQRLGAEAEIIAVRTLRHGAGLTQYQ
                     VIAGDAESAAAERRRMTPDGGGHPLLTSAPGPEHFAQRRQEGGPRVLAFVGPTGVGKT
                     TTIAKLGTHPEFLRPGRIGFLCLDTYRVGAVEQIKTYGEIAGIPVEVIYESADLPNAM
                     RRLSDRDLILVDTPGRSPRLQGDTQQVRQWLMQLAPHETHLVLPAGLQPEQVRRAIAA
                     YRAQGATHLLATKLDEAPDDWSLFDAAAEARMPMRWLSDGQDVPRDLKAAAPRLLAAV
                     AALRVTSNERTEVVA"
     gene            1926..2753
                     /locus_tag="VLD58_12970"
     CDS             1926..2753
                     /locus_tag="VLD58_12970"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSB55267.1"
                     /translation="MNDQAAQLRAMMAGLRREPVPPAGPPTIVIGSGKGGVGKSVVSA
                     LLAQRLAAEGRRVLLVDGSQNLGNQHVLFGVHRGATLEHLLADAVSPRELLVNVNENL
                     FLLPADSGAESLHGLGALDRARLHHRLSVLYNDFEVVIVDSGAGIDSVMRVCTMGATR
                     LILVTLPEPAALTDAYATLKIVHAQLKDLPVDVLINRVEDAREGPQAFERLATAAERF
                     LHRPVRYLGAIWEDDEIRRAVRAPGRVATGLGPGPNSDLLTTVLERLEVPAPARTAE"
     gene            2750..3559
                     /locus_tag="VLD58_12975"
     CDS             2750..3559
                     /locus_tag="VLD58_12975"
                     /inference="COORDINATES: protein motif:HMM:NF005413.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliA/WhiG family RNA polymerase sigma factor"
                     /protein_id="HSB55268.1"
                     /translation="MRPQEEGQPMATTATPTTMTDALWQKYRATGDPDARSQLLDRYL
                     GLVHHVARQVAARVSDVVEVDDLVSAGTLGLVQALEAFDLSRGLAFSTYAMRRIRGSI
                     LDELRSRDWVPRSVRSKGRQLATAIAQLENRLGRAPEPSEVAKALSIDMETYWRWREE
                     VDGAVLVSLDGSVSSENTESATLAETLSDATAERPGDAVTQEETVANLRHAIGMLPPK
                     ERTVLALYYYEELNLRQIAEVLHVTESRVSQIRTQALKRLRQRMSPAGDVA"
     gene            3556..4146
                     /locus_tag="VLD58_12980"
     CDS             3556..4146
                     /locus_tag="VLD58_12980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55269.1"
                     /translation="MNPRLRWVLLAFLAGFVLLSLIPALPGLWQSLAAVDLSAVATVA
                     TEQSDLLLGTAAALLAVVLGLNVRRRIRRQQASAFSDALSRSTASKQARGAAMVNSPR
                     RAVKPAARAPRRPAPPASELEVKIRAGATKGERIPALARRHGISIDAVRAALGDSLPE
                     AAARPGSSFRARQQRLPAKPPAALQPVRRNPYGALA"
     gene            4236..>4573
                     /locus_tag="VLD58_12985"
     CDS             4236..>4573
                     /locus_tag="VLD58_12985"
                     /inference="COORDINATES: protein motif:HMM:TIGR03506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein"
                     /protein_id="HSB55270.1"
                     /translation="MGLNALKSTAQTLSFYTRLQALTANNLANSDTEGFKADVMSARL
                     IGDATFPVPVTKTDLSQGTMTSTGRPLDLGLEGPGFFVLQTDQGERLSRGGAMALDGA
                     NRLADRHGNVL"
BASE COUNT          716 a         1656 c         1532 g          669 t
ORIGIN      
        1 cggccgagcc ggcgccgatc aaggacctgc tgcaggtgga gccgctcgag gtcgaggtgg
       61 ggtacgcgct ggtgccgctg gtggacgaag cccagaaggg cgacctgctg cagcggatcg
      121 gcctgatgcg caagcagctc gcgctcgagc tcggcatcat cgtgccgccg gcgcggatcc
      181 gcgacaacat ccagctcccc gccaccgagt acgccatcaa gctccgcggc gtccgggtgg
      241 cgtcgggtga agtgctgccc cgctatctcc tcgcgctcga taccgccggc ctggcctcgc
      301 cgatcgacgg gatccggacc accgacccga gcttcgggct cccggcagtg tggatcacgc
      361 ccgaccgcag ggtggaggcg gaggccaacg gctacagcgt ggtcgagccg cagaccgtgc
      421 tctcgaccca cctgatggag acgatcaagc accacgccgc ggatctcctc tcgcgccaga
      481 acgtgcgcga gctgctcgac gcgctcaagg aaacccatcc ggccctggtg gacgacacca
      541 tcccggccaa gctctcgctc gggagcgtgc accgggtgct ccagcggctg ctccgcgaag
      601 gcatcccgat ccgcgacctg gcgctcattc tcgagaccct gtcggacggc gccgaggtca
      661 ccaaggatcc ggaagcgctc accgaacagg tgcgccgcac cctcagcacc gtgctggtcc
      721 agatcttcga cgatggcgac gggagcatca gcggcatcac catgggcccc cggctcgagg
      781 cggcgctcat ggggctcttc agcccgcgcc ccgcccgcga aggcggccgc ggcatcgagc
      841 cggaagagct gacctcggcg ctccgctcgc tcaacgatct catgaaccgc tacaagcgcg
      901 acggccagta ccgtccgctg atcaccccgc cggcgctccg gatcggtgtc cgccgcctgg
      961 tggaaccggt gctgccacac ctgccggtgc tgtcgctggg cgaactgccg gcccagacac
     1021 ccattcacag tctcgcaacc tgggagctct cccgtgccgc ttgagtcctt catcggcccc
     1081 gcggtggatg cgctgctcgc gcaggcccgc cagcgccttg gcgccgaagc cgaaattatc
     1141 gcggtccgca ccctccgcca cggcgcgggc cttacccagt accaggtcat cgccggcgat
     1201 gccgagtcgg ccgcggccga gcgccgccgc atgacgccgg acgggggcgg gcatccgctc
     1261 ctcaccagcg cgccgggtcc cgagcacttc gcgcagcgcc gccaggaggg cgggccgcgg
     1321 gtcctcgcct ttgtcggccc gaccggggtg gggaagacca ccacgatcgc caagctcggc
     1381 acccatcccg aatttctccg cccgggccgg atcgggttcc tctgcctcga cacctatcgg
     1441 gtgggcgcgg tggagcagat caagacctat ggcgagatcg cggggattcc ggtcgaggtg
     1501 atctacgagt cggccgacct gcctaacgca atgcgccgcc tctccgaccg ggacctcatc
     1561 ctggtcgata ccccgggccg gagtccgcgg ctccagggcg acacccagca ggtgcgccaa
     1621 tggctgatgc agctggcgcc gcacgagacc catctggtcc tccccgccgg cctccagccg
     1681 gagcaggtgc gccgcgccat tgccgcgtac cgggcccagg gcgccaccca tctcctcgcg
     1741 accaagctcg acgaagcgcc ggatgactgg tcgctcttcg atgctgccgc cgaggcgcgg
     1801 atgccgatgc gctggctgtc ggatggccag gacgtcccgc gcgacctcaa ggcggcggcg
     1861 ccgagactcc tcgccgcggt ggccgcgctg cgggtcacct cgaacgaacg caccgaggtg
     1921 gtggcgtgaa cgaccaggcc gcacagctcc gcgccatgat ggcggggctt cgccgcgaac
     1981 ccgtcccgcc ggcggggccg ccgaccatcg tgatcggcag cggcaagggc ggcgtgggca
     2041 agtcggtggt gagcgccctg ctggcgcagc ggctcgcggc cgaaggccgg cgggtgctgc
     2101 tggtcgacgg cagccagaat ctcggcaacc agcatgtcct cttcggggtt catcggggtg
     2161 cgacgctcga acatctgctc gcggacgcgg tgagcccgcg cgaactcctg gtgaacgtca
     2221 atgaaaatct ctttctcctt cccgccgaca gcggggcgga gagtctccac ggcctcggcg
     2281 cgctcgaccg ggcccggctc catcatcgcc tcagcgttct ctacaatgac ttcgaagttg
     2341 tcattgtcga cagtggcgct ggtatcgaca gtgtcatgcg ggtctgcacc atgggcgcga
     2401 cccggctgat tctcgtcacg ctgccggagc ccgccgcgct gaccgacgca tacgccaccc
     2461 tgaaaattgt gcatgcccag ctgaaggatt tgccggttga tgtactgatc aaccgggtgg
     2521 aagacgcccg cgaaggcccg caagcctttg aaagactcgc gaccgcggcg gaacgcttcc
     2581 tgcacagacc ggtcaggtat ctcggagcaa tctgggaaga cgacgaaatc cggcgcgcgg
     2641 tgcgcgcccc gggcagggta gccaccggtc tcggccccgg tccgaactcc gatctcctga
     2701 ccacggtcct cgaacgactc gaggtccctg ctccggcgag gacagccgaa tgagacccca
     2761 ggaagaaggc cagccgatgg cgacgaccgc gactcccacc acgatgaccg acgcgctctg
     2821 gcagaagtac cgcgccaccg gtgatcccga cgcccgcagt cagctgctcg accgctacct
     2881 cggcctggtg catcacgtgg cccggcaggt cgcggcgcgg gtctccgacg tggtcgaagt
     2941 cgatgatctg gtcagtgccg gcacgctcgg cctggtgcag gcgctcgagg cgttcgatct
     3001 ctcccgcggt ctcgcgttca gcacctacgc gatgcggcgg atccgcggct cgattctcga
     3061 cgagctccgc agccgtgact gggtcccgcg ttcggtccgt tccaagggcc gtcagctcgc
     3121 caccgccatt gcccagctgg agaaccggtt gggtcgggcg ccggagccaa gcgaagtggc
     3181 caaggctctc tcgatcgaca tggagaccta ctggcgctgg cgggaagagg tcgatggcgc
     3241 ggtgctggtc tcgctggatg gctcggtctc gagcgagaac accgagtcgg ccacgctggc
     3301 cgagaccctg agcgacgcca cggccgagcg gccgggcgat gcggtgaccc aggaggaaac
     3361 ggtcgccaac ctgcgccacg ccatcgggat gctgcctccc aaggaacgca ccgtcctggc
     3421 gctgtactac tacgaagagc tgaacctccg ccagatcgcc gaagtgctgc atgtgaccga
     3481 gtcgcgggtc tcccagatcc ggacccaggc gctcaagcgg ctccgccagc ggatgtcgcc
     3541 cgcgggagac gtggcatgaa cccgcggcta cggtgggtac tgctcgcatt cctggcgggc
     3601 ttcgtcctgc tctcgctcat cccggcgctg ccgggactct ggcagtcgct cgcggccgtc
     3661 gatctctccg ccgtcgcgac cgtggccacc gagcagagcg atctcctgct cgggaccgct
     3721 gcggcgctgc tcgccgtggt gctggggctg aatgtgcgcc gccggatccg gcggcagcag
     3781 gcatcggcgt tcagcgacgc gctcagccgg agcactgcca gcaagcaggc gaggggcgct
     3841 gcgatggtga actcgccccg gcgggcagtg aagccggcgg cccgcgcgcc gcgccgccca
     3901 gcgccgcccg cctcggagct cgaagtgaag atccgggcgg gagccaccaa gggtgagcgc
     3961 attcccgcgc tggcccgccg gcatgggatc tcgatcgatg cggtgcgggc cgcgctgggc
     4021 gattcgttgc ccgaggctgc cgcccgaccg ggcagttctt tccgggcccg ccagcagcgg
     4081 ctaccggcaa agccgcccgc cgccctccag cccgtccgca gaaaccctta cggcgccttg
     4141 gcttagctcg gcctgtccga gggcatgacg attgcccttg tgtgcccctg acgatccctg
     4201 ccggtcactt cgaccggcac cacctgtgag gaacgatggg gctcaacgca ctcaagagca
     4261 cggcgcagac cctcagcttc tacaccaggc tgcaggcgct caccgccaac aacctcgcca
     4321 acagcgacac ggaaggcttc aaggccgacg tgatgtcggc ccggctcatc ggcgacgcca
     4381 cctttccggt tccggtcacg aagaccgacc tgtcgcaggg caccatgacc agcaccggcc
     4441 ggccgctcga tctcgggctc gaaggtcccg gctttttcgt gctgcagacc gaccagggcg
     4501 aacggctgag ccggggcggc gcgatggcgc tcgacggcgc caaccgactc gcggaccggc
     4561 acggcaatgt gct
//
LOCUS       DATIFF010000886         1393 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1647179, whole genome shotgun sequence.
ACCESSION   DATIFF010000886 DATIFF010000000
VERSION     DATIFF010000886.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1393
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1647179"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(20..565)
                     /locus_tag="VLD58_12990"
     CDS             complement(20..565)
                     /locus_tag="VLD58_12990"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: protein motif:HMM:NF013222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HSB55271.1"
                     /translation="MTEIPGWTLFPTPIGGCAIAWREATVIGVQLPERDDHATRARMR
                     RRWPGACESAPPEAVRAVIGALTDLLEGKAADLSALPLPFEQVPAFNRQVYEIARGIP
                     AGQTLSYGEVAKRLGDVSLARAVGQALGQNPWPLIVPCHRVVGADGRPGGFSGGAGTP
                     TKLRLLAIEGVLPGDQRSLFD"
     gene            640..1104
                     /locus_tag="VLD58_12995"
     CDS             640..1104
                     /locus_tag="VLD58_12995"
                     /inference="COORDINATES: protein motif:HMM:NF016955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerB family tellurite resistance protein"
                     /protein_id="HSB55272.1"
                     /translation="MLDAIRHFVARRMTPAGSPGATRRAVPEVQLAACALLLELAHAD
                     SEFSASERTHIEQALVRHFGVDEAAARELIDLAESERAGSIDHFQFTRLINEQYDLGQ
                     KMVLAEVMWGVILADGTIAEHEAYLVRKLANLLNLEPGYLAAARRSASGEQA"
     gene            1112..>1393
                     /locus_tag="VLD58_13000"
     CDS             1112..>1393
                     /locus_tag="VLD58_13000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSB55273.1"
                     /translation="MPDSLRLTYIGGPTILIEWRGLRLLTDPTFDPPGTSYPTPAYTL
                     HKTLGPAISAEKLGPVDAVLLSHDHHFDNLDHAGRALLPLARQVLTTRAG"
BASE COUNT          220 a          542 c          421 g          210 t
ORIGIN      
        1 gaaccctgaa ggccggtttt cagtcgaaga gtgaccgctg gtcccccggc aggaccccct
       61 cgatcgccag cagtctcagc ttggtcggcg ttcccgctcc gccggagaac cctcctggac
      121 gtccgtcggc cccgaccacc cggtgacatg gcacgatcag gggccaggga ttctgtccca
      181 gcgcctgtcc cacggcccgc gcgagactca catcaccgag ccgcttcgcc acctcgccgt
      241 agctgagcgt ctgacccgca ggaatgcccc gcgcgatctc gtatacctgc cgattgaacg
      301 ccggcacctg ctcgaacggc agcggcagcg ccgagaggtc ggcggccttg ccttcgagca
      361 gatcggtgag cgccccgatc accgcccgca ccgcctcggg cggggcagac tcgcacgcgc
      421 cgggccagcg ccgccgcatc cgcgcccgcg tggcatggtc atcccgctcc gggagctgaa
      481 ccccgatcac ggttgcttcg cgccacgcga tggcgcatcc gccgatcggt gtgggaaaga
      541 gggtccagcc gggaatctca gtcatacgct cacctgtgcc gtcttgccgg tcgcgccgat
      601 gtgccccacc ttgcaggaaa gctagcccgg gaccactcga tgctcgatgc catccgtcac
      661 ttcgttgccc gccgcatgac gccggccggt tcgcccggcg ccacccgccg cgcggtgccc
      721 gaggtgcagc tcgccgcctg cgccctgctg ctggagctcg cccatgcgga cagcgagttc
      781 tccgccagcg agcggaccca catcgagcag gccctggtgc ggcacttcgg ggtcgacgaa
      841 gccgcggccc gggagctgat cgacctggcg gaatcggagc gcgccggctc gatcgaccat
      901 ttccagttca cccgcctcat caacgagcag tatgacctgg gccagaagat ggtcctggcc
      961 gaggtgatgt ggggcgtgat cctggctgac ggcaccatcg ccgaacatga ggcctacctg
     1021 gtacggaagc tcgcgaacct gctcaacctc gagccgggct accttgcggc tgcccgccgg
     1081 tcggccagcg gagagcaggc ctgaccgcca catgcccgat tcactccggc tgacctacat
     1141 cggcggtccg acgatcctga tcgaatggcg cggactccgg ctcctcaccg atcctacctt
     1201 cgatcctccc ggcaccagct acccaacacc ggcctacacc ctccacaaga ccctcggccc
     1261 cgcgatatcg gccgagaagc tcggccccgt cgacgcggtt ctcctgagcc acgatcacca
     1321 cttcgacaac ctcgaccacg ccggccgcgc cctgctgccc cttgcgcgcc aagtcctgac
     1381 cacccgggcc ggc
//
LOCUS       DATIFF010000887         6559 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_109915, whole genome shotgun sequence.
ACCESSION   DATIFF010000887 DATIFF010000000
VERSION     DATIFF010000887.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6559
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109915"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(313..1452)
                     /locus_tag="VLD58_13005"
     CDS             complement(313..1452)
                     /locus_tag="VLD58_13005"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSB55274.1"
                     /translation="MPDTREIRTFLEPGHLALEGRATAFARETIATRPESADDDAARR
                     DARELLRLLGQGGWLKPIFDLDLRGCCLMREALGAASPLADAVFALQGLGTTPLLLRG
                     SPAQKARWLDQIAAGEVMTAFAMTEPEAGSDVAAISTRARRDGSGFVLDGRKTLISNA
                     GIADLYAVFASTDPAAGPKGMSCFLVPADTPGLHFAGAQVLSAPHPLGELRFESCRVP
                     AEALVGEEGRGYGIGLAALDRLRPTVAAAACGMAARALEESLAHVKRRQQFGKPLAEF
                     QLVQQKLARMATDLSAARLLVYRAAYEKDQGQERITIEAAMAKAFATEMAQRAVDDAV
                     QLIGGRGVLASHPVDRLYRAVRALRIYEGTTEIQQLIIAGELLKS"
     gene            complement(1453..2277)
                     /locus_tag="VLD58_13010"
     CDS             complement(1453..2277)
                     /locus_tag="VLD58_13010"
                     /inference="COORDINATES: protein motif:HMM:NF006107.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase family protein"
                     /protein_id="HSB55275.1"
                     /translation="MDQLECMRMTLAPKSFLYSVDSASSVATITLNRPERLNALTFEI
                     YTELRDTFRALDTEPGVRAIIITGAGRAFCTGGDVEDIIGALFSRDYDGLLEFTRLTC
                     DLILSIRQCRRPVIAALNGTVAGAGAVIAAASDFRIAAESAKIAFLFTRVGLAGADMG
                     AAWLLPRLVGLGHATELLMLGDFISAERAVQIGLYNRVVPGDRLMAEATEYAARLARG
                     PSAALGVTKESLNQEASMDLVSALEAEARAQAACMQNPNFREAYEAFRAKREARFE"
     gene            complement(2352..2750)
                     /locus_tag="VLD58_13015"
     CDS             complement(2352..2750)
                     /locus_tag="VLD58_13015"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HSB55276.1"
                     /translation="MSRYEIINPEALGAPRGFNHGLLAAAGGRVLFVAGQIARDQAGR
                     MASDFVGQFDRALGNVLTVVHKAGGTAADLGRLTIYVTDMGQYRSNLKALGEVYRRHM
                     GNHYPAMALVEVSALVDPEALVEIEATGVV"
     gene            complement(2747..3517)
                     /locus_tag="VLD58_13020"
     CDS             complement(2747..3517)
                     /locus_tag="VLD58_13020"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSB55277.1"
                     /translation="MSGLAGRVAIVTGAGRGIGAATARALAEEGCQVVVAARSRDQIE
                     AIASELTSAGHSALAVVCDVTSEESVLAMAQRAATLGPIALLVNNAGIAASMPIVRTS
                     LEDWNRVMAVNATGAFLCTRAVLPGMLERRWGRIVNVASTAGLHGARYIATYSAAKHA
                     LMGFTRSAAAEVEGTGVTVNAVCPGFVDTEMTAETLDRIVSKTGRSRAEALAAALASA
                     GQTRLVTAQEVARAVVTLAADSTTPPNGREVILTGTDS"
     gene            complement(3514..4239)
                     /locus_tag="VLD58_13025"
     CDS             complement(3514..4239)
                     /locus_tag="VLD58_13025"
                     /inference="COORDINATES: protein motif:HMM:NF014670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HSB55278.1"
                     /translation="MTWVEARDTAGPRTVAILPVGAVEAHGPHLPLETDVIIAQAMAR
                     AGADRLARRKIPTVILPALSYTAAGFARGFPGTISLRPETVSATIVDIAASLQQQGYR
                     VLAIANAHLDPAHLASLEATAEEIRRSGTLTVVFPNLTRKPWGSRLSEEFKSGACHAG
                     QFETSIVLAERPDLVREAARAGLPANPVSISQAIREGKQSFEEAGGPLAYFGFPADAT
                     AAEGRATIEILGTILADAVESSP"
     gene            4298..5827
                     /locus_tag="VLD58_13030"
     CDS             4298..5827
                     /locus_tag="VLD58_13030"
                     /inference="COORDINATES: protein motif:HMM:TIGR02262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016405 - CoA-ligase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoate-CoA ligase family protein"
                     /protein_id="HSB55279.1"
                     /translation="MTLDPPVQLNIAEYFLDARVREGRGDRTAIITGSARLSYGQVQA
                     LANRYANLLRAAGVLPEQRVIIALPDGPEFVAALFGTLKIGAVVVMVNPELKPEAIEY
                     FFDYSRASVVLVAAERADAFRAASGRATHHPQLLVVGGGDWDSRLSALPDSFENFPTH
                     RDDPAIWLFSGGTTGKPKAAVQPHRSFVNTAECYARHVLQYTENDVTLSVPKLFFGYA
                     TGSNLLFPFAAGAATVLFDDRCTADMIFTQVARHRPTILIAVPTMINQMVSHPDAARQ
                     DFSSLRLATSAGEGLPEALHARWDQTFGVPLLDGLGTAEMWHIFLSNRVGRVRRGTLG
                     EVVPGFEIRVIDEEGRELPNGEMGLLSVRGGSRALGYWQQHEKSQLAFRGEWVVSGDL
                     VCRDSDGYFTYGGRADELLKVSGKWLSATEVEGCLLQHPLVSQVAVVGVTDAAGLVKP
                     HAYVIPRERRDGLAEELKAFVRDRLEPYKCPREMTFVDSLPTTHLGKVDRGKLRASPT
                     Q"
     gene            complement(5849..>6559)
                     /locus_tag="VLD58_13035"
     CDS             complement(5849..>6559)
                     /locus_tag="VLD58_13035"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HSB55280.1"
                     /translation="DAAVFAPLHGPEGWLFVVADGVGGQPGGALASETAVTTLVDYLG
                     QAAACFNRIEPDKEHEILEELEAAVQAAHRRVSEHGHGASRSVVAGPATTLTMALLVW
                     PRAYIVHVGDSRAFYLRKGRLKQLTRNQTTGEYMVDVGAWTEEQASKAPIGGSLVSAI
                     GASEMTPSIGLVDLQPGDSLLLCTDGLTRHVSDERIAELLARTTDADTACRELVDEAL
                     AGGGHDNVTVVLARMVPG"
BASE COUNT         1002 a         2318 c         2184 g         1055 t
ORIGIN      
        1 cgcccgccag gggaccatgg ccggaaccca ggtgcgctcc gccagcttga gccggccggc
       61 atcgagggga ctgaaccagt gcgaccgtgc cgcctctgcc tgggtcggcg gagtcgtctt
      121 cgggatttcg tgcttgatca cgggttcagg atgccacatg tcgtgtgaag cccgattcca
      181 tgatagggtc aatctgcgcc tcaacacaga ggcacagaga acacagagaa ctgcaggaga
      241 actacaaagg tctttctcct gttgttctct gtgccctctg tgcctctgtg ttgaagttgc
      301 tgttgaatcg gttcagctct tgagcagctc gcccgcgatg atcaactgct ggatctcggt
      361 cgtcccctcg tagatccgaa gcgcccgcac cgcgcggtac agccggtcca ccgggtggct
      421 tgccagcacc ccgcgccccc cgatgagctg caccgcatcg tccaccgctc gttgcgccat
      481 ctcggtggcg aacgccttgg ccatcgccgc ctcgatcgtg atccgctcct ggccctggtc
      541 cttctcgtat gcggcccgat agaccagcag gcgcgctgcc gagaggtcgg tcgccatccg
      601 ggccagcttc tgctgcacca gctgaaactc ggcgagcggt ttcccgaatt gctgccgccg
      661 tttcacatga gccagcgact cctcgagtgc ccgtgccgcc atgccgcacg ccgcggccgc
      721 taccgtcggc cgcagccggt cgagtgccgc gagcccgatc ccgtacccgc ggccctcctc
      781 gcccaccagc gcctccgccg ggacccggca gctctcgaat cggagttccc cgagcggatg
      841 cggggcgctc aggacctggg cccccgcgaa gtgaagaccc ggcgtgtcgg cggggaccag
      901 gaagcagctc attcccttgg ggcccgccgc cgggtcggtc gaggcgaaga cggcgtagag
      961 gtccgcgatg ccggcgttgg agatgagtgt cttcctgcca tcgaggacga agccggaacc
     1021 gtcccgccgg gcccgggtcg agatcgccgc gacatcggag cctgcctccg gctccgtcat
     1081 cgcaaaggcc gtcatcacct cgccggcggc gatctggtcg agccagcgtg ccttctgcgc
     1141 cggcgacccg cggagcaaca gcggcgtggt gccgagtccc tggagcgcga agaccgcatc
     1201 ggcgaggggc gaggcggcgc ccaacgcctc gcgcatcagg cagcaacccc gcaggtcgag
     1261 atcgaagatc ggcttgagcc accctccctg cccgaggagg cggagcagtt cccgcgcgtc
     1321 acggcgcgcg gcgtcatcat cggccgactc ggggcgggtc gcgatggtct cccgcgcaaa
     1381 ggccgtggcg cgcccctcga gggcgagatg ccctggctcg agaaaggtgc ggatctccct
     1441 ggtatcgggc atctactcga acctcgcctc gcgcttggcg cgaaaggctt cgtaggcttc
     1501 gcgaaagttg gggttctgca tgcaggccgc ctgggcccgc gcctcggcct ccagggcgga
     1561 gaccagatcc atcgacgctt cctgattgag cgattccttg gtgacgccga gcgctgccga
     1621 tggcccgcgc gccagccggg cggcgtactc ggtggcctcg gccatgagcc ggtcgcccgg
     1681 caccacccgg ttgtagagtc cgatctggac cgcccgctcc gccgagatga agtcgcccag
     1741 catcaagagt tcggtggcgt gtcccagacc taccagccgg gggaggagcc aggccgcgcc
     1801 catatcggcg cccgccaggc caacgcgggt aaagaggaag gcgatcttgg cgctctcggc
     1861 ggcgattcga aagtcgctgg ccgccgcgat gacggcgccg gccccagcca cggtgccgtt
     1921 gagcgccgcg attaccggcc ggcgacactg ccggatggag agaatcaggt cgcaggtgag
     1981 ccgggtgaac tcgagcagcc cgtcgtagtc acgggagaac aacgccccga tgatgtcctc
     2041 gacgtcaccc ccggtacaga aggcgcggcc tgcgccggtg atgataatgg cccgcacgcc
     2101 gggttcggtg tcgagcgcac ggaacgtgtc ccgcaactcg gtgtagatct cgaaggtcag
     2161 cgcattcagc cgctccggcc gattgagcgt gatggtcgcg acggagctcg ccgagtcgac
     2221 agaatagagg aaagacttcg gggccaaagt catgcgcata cactccagtt gatccatttt
     2281 gcgggcgcgc aggcggtatc cctccgggcg ctcggcgccc gaccgccttg ccgccttgcc
     2341 gctttgccgc ctcaaaccac ccccgtcgcc tcgatctcga ccagggcctc gggatccacc
     2401 agcgccgaca cctcgaccag cgccatcgcc gggtaatgat tgcccatgtg ccgccgatac
     2461 acctcgccca gcgccttgag gttcgagcga tactgcccca tgtccgtcac gtagatagtc
     2521 agacgcccaa ggtcggccgc ggtcccaccg gccttgtgaa ccaccgtgag cacattcccc
     2581 agcgcccggt cgaactggcc tacgaagtcg ctggccatcc gccccgcctg gtcccgcgcg
     2641 atctgccccg ccacgaagag cacccggccc ccggcggcgg ccaggagccc atggttgaag
     2701 cctcggggag cgccgagcgc ctcgggattg atgatttcgt atcggctcac gagtcggtcc
     2761 cggtcaggat cacttcgcga ccattgggag gggtggtcga gtcggctgcc aaagttacta
     2821 cggcccgggc aacttcctgc gccgtgacca gccgggtctg accggcagag gccagcgcgg
     2881 ccgcgagggc ctcggcccgg ctccgcccag tcttgctcac gatccggtcc agggtctccg
     2941 ccgtcatctc ggtgtcgacg aatccgggac agaccgcgtt gaccgtgacc ccggtgcctt
     3001 cgacctcggc cgcggcggaa cgggtgaagc ccatcagcgc atgcttggcc gcgctgtagg
     3061 tcgcgatgta cctggcgcca tgcagccccg ccgtcgatgc cacgttcacg atccgtcccc
     3121 accggcgctc cagcatgccg ggcagcaccg cgcgggtaca aaggaaggcg ccggtggcat
     3181 tcaccgccat cacgcgattc cagtcctcca gtgaagtccg cacgatcggc atcgaggcgg
     3241 caataccggc attgttaacc agcagcgcga tgggacccag cgtcgcggcc cgttgggcca
     3301 ttgccagcac gctctcctcg ctggtcacgt cgcacaccac cgcgagtgcc gagtggccgg
     3361 cagaggtgag ctcggacgca atcgcctcga tctggtcgcg gctgcgtgcc gccaccacaa
     3421 cctggcagcc ttcctccgcc agcgccctgg ccgtggccgc gccgatcccg cgcccggcgc
     3481 cggtcacgat ggcgactcta ccggcgagcc cgctcacggc gaggactcga ccgcgtcagc
     3541 gaggatcgtc cccaggatct cgatcgtggc ccggccctcg gcggcggttg catcggcggg
     3601 gaatccgaaa taggccagcg gcccgccggc ttcctcgaat gattgtttcc cttcgcgaat
     3661 cgcctgggag atcgagaccg gattggctgg caacccggca cgcgcggcct cccggaccag
     3721 gtcggggcgc tccgcgagca cgatcgaagt ctcgaactgg ccggcgtggc aggcgccgct
     3781 cttgaactcc tcgctcaggc ggctgcccca gggcttcctg gtcaggttgg ggaagaccac
     3841 ggtcagggtg ccggaacggc gaatctcttc ggccgttgcc tcgagcgatg cgagatgagc
     3901 cggatcgaga tgggcgttgg cgatggcgag cacccggtag ccctgttgct ggagacttgc
     3961 agcgatatcc acgatggtcg ctgagacggt ttccggccgg agggagatgg tcccggggaa
     4021 gccccgggcg aatccggctg cagtgtaact gagcgcgggc aggatcaccg tcgggatctt
     4081 gcggcgcgcc aggcggtctg cccccgcccg ggccatggcc tgggcaatga tgacgtcggt
     4141 ctcgagcggg agatgcgggc cgtgggcctc cacggcgccc accggcagga ttgcgacggt
     4201 gcgaggcccg gcggtatctc gggcctcgac ccaggtcatt gcggcgagcg tcggtacagt
     4261 tattgtgtcc tcaccgtctt ccttcgggac gtccaccatg acgctggacc cgccggtgca
     4321 gttgaatatc gcggagtact tcctcgatgc ccgcgtgcgg gaggggcggg gggaccggac
     4381 tgcaatcatc accggtagcg cgcgcctgag ttatggccag gtccaggcgc tggcgaaccg
     4441 ctacgccaat ctgctgcggg ccgccggcgt gctcccggag cagcgggtga tcatcgccct
     4501 gcccgacggt ccggagtttg tggcggcgct cttcggtact ctcaagatcg gcgccgtcgt
     4561 ggtcatggtc aacccggaac tcaagcccga ggccatcgag tacttcttcg actacagccg
     4621 ggccagtgtc gtcctggttg ccgcggagcg ggccgacgcc ttcagggctg cctcagggag
     4681 ggcgacgcac catccccaac tgctggtcgt aggcggcggc gattgggatt ccaggctcag
     4741 cgcgctgccc gactccttcg agaacttccc cacccaccgt gacgacccgg ccatctggct
     4801 cttctccggc gggaccaccg gcaagcccaa ggccgcggtg cagccccacc gctccttcgt
     4861 caatacggcg gaatgctacg cccgccatgt gctgcagtac accgagaacg atgtgaccct
     4921 gtcggtgccc aagctcttct tcggctacgc caccgggtcc aacctgctgt tcccctttgc
     4981 cgccggcgcc gccacggtcc tgttcgacga ccgctgcacc gccgacatga ttttcaccca
     5041 ggtcgcccgg caccggccca ccatcctgat cgcggtgccc accatgatca accagatggt
     5101 gagtcacccc gatgccgcgc ggcaggattt ctcctcgctc cggctggcca cctccgccgg
     5161 agaaggactg cccgaggcgc tgcacgcccg ctgggaccag accttcgggg tgccgctgct
     5221 cgatggactc ggcaccgccg agatgtggca catcttcctc agcaaccgag tgggacgggt
     5281 ccgccgaggt acgctgggtg aagtagtgcc cggcttcgaa atccgggtga tcgatgagga
     5341 gggcagggaa ctccccaacg gtgagatggg actcctctcg gtgcgcggcg gatcgcgcgc
     5401 cctcggctac tggcagcagc acgagaagag ccagctggcg ttccggggcg agtgggtggt
     5461 ctcgggcgat ctcgtctgcc gcgattccga cgggtacttc acctacggcg gtcgagccga
     5521 cgagctgctc aaggtctcgg ggaagtggct ctccgcgacc gaagtggagg gctgcctgct
     5581 gcagcatccg ctggtgtcgc aggtggcggt ggtgggtgtg accgacgctg ccggcctggt
     5641 gaagccccat gcctacgtca ttcccaggga acgccgcgac ggcctcgcgg aagaactcaa
     5701 ggccttcgtg cgcgaccggc tggagcccta caagtgtccc cgcgagatga ccttcgtcga
     5761 ttccctgccg accacccacc tgggcaaggt ggaccggggc aagctccgag cgagcccgac
     5821 gcagtgaaag gcctcgcggg ggccggtctc agcccgggac catccgcgcc agcaccaccg
     5881 tgacgttgtc gtggcccccg cccgcgagtg cctcgtccac cagctcgcgg cacgccgtgt
     5941 ccgcgtcggt cgtccgggcc agcagctcgg cgatgcgctc gtccgacacg tgccgggtga
     6001 gcccgtcggt gcagagcagg aggctgtccc ccggctggag gtccaccagc ccgatcgaag
     6061 gggtcatctc gctcgcgccg atggcgctca ccagggagcc cccgatcggc gccttgctgg
     6121 cctgctcctc ggtccaggcg ccgacgtcca ccatgtactc cccggtggtc tggttccggg
     6181 tgagctgctt gaggcggccc ttccggagat agaacgcccg gctgtcgccg acgtggacga
     6241 tgtaggccct gggccacacc agcaacgcca tcgtgagcgt ggtggcgggc cccgccacca
     6301 cgctccggct cgcgccgtgg ccatgctcgc tcacccgccg gtgtgccgcc tggaccgcgg
     6361 cctcgagctc ctcgaggatc tcgtgctcct tgtccggctc gatccggttg aagcaggccg
     6421 cggcctgccc gaggtagtcc accagcgtgg tgaccgccgt ctcgctcgcc agcgcgcccc
     6481 caggctgccc gcccactccg tcggcgacga cgaagagcca gccttccggg ccgtgcaggg
     6541 gggcgaacac cgccgcgtc
//
LOCUS       DATIFF010000888         2107 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_571805, whole genome shotgun sequence.
ACCESSION   DATIFF010000888 DATIFF010000000
VERSION     DATIFF010000888.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2107
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_571805"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..804)
                     /locus_tag="VLD58_13040"
     CDS             complement(<1..804)
                     /locus_tag="VLD58_13040"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB55281.1"
                     /translation="MSDLKQRLTTALAGRYAVEGLAGEGGMATVFRATDIKHQRPVAI
                     KVLRPELAATIGSERFLREIELSARLQHPHILPLYDSGDAGGFLYYVMPFVEGESLRD
                     RLNRERKVPFEQAVTLLREIASALGYAHAQGIVHRDIKPENILLSGGHAVVADFGIAR
                     ALRVASGGQQMTGLGFAIGTPAYMSPEQATASEVDGRSDQYSLACVFYEMVSGQAPFS
                     GPTVQAVLTQSLTGPRPKLSRLTRTTPPEADAPLQRALASDPGTRFPTVQ"
     gene            989..>2107
                     /locus_tag="VLD58_13045"
     CDS             989..>2107
                     /locus_tag="VLD58_13045"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB55282.1"
                     /translation="MSQLILQALAVGPRDSAELLRALSDRASLPNHWDPNALDAILRR
                     LMQRGFVEAHWELRGGAGGRRYHLTRLGEQRLALAPPDPDGSLAAESEWVTRSLVDSY
                     GVIRPLGRGATGAVYLALDRVLQRYVAVKVLQRQLAQDPAMRERFLREARTNAGLAHP
                     AIVPVFGMVASADLVFFVMQYVPGDSLGALLRERGKLPAQEACRILAELAGALDYAHR
                     QRVVHRDVKPENILIHRDTGMPMLTDFGVARAISFDAMHTSEQKAERELFWGTPHFMS
                     PEQISGEDNLDGRSDLYALGALGYTMLTGRPPFEGHGPVEIAARQLTMTPPALGELAP
                     ESPEALVHAITRCLARNPGDRWQDGRSLREALIGAGVLA"
BASE COUNT          330 a          682 c          755 g          340 t
ORIGIN      
        1 ctgcaccgtg ggaaagcggg tgcccggatc cgacgccagg gcccgctgca gtggcgcgtc
       61 ggcttcggga ggcgtcgtgc gggtgagcct gctcagcttc gggcgcgggc cggtgaggct
      121 ctgggtgagc acggcctgca ctgtgggccc tgagaacggc gcctggcccg agaccatctc
      181 gtagaagacg caggccagcg aatactgatc gctccgccca tcgacctcgc tggcggtcgc
      241 ctgctcggga ctcatgtagg ccggcgtgcc gatggcgaat ccgagccccg tcatctgctg
      301 tccgccggaa gcgacccgaa gggcacgggc gatgccgaaa tcggcgacca ccgcgtggcc
      361 gcccgagagc aggatgttct cgggcttgat gtcacggtgg acgattccct gggcatgcgc
      421 gtagcccagg gcgctcgcga tttcgcggag gagggtgacc gcctgctcga agggaacctt
      481 gcgctcccgg ttgagccggt cgcgcagcga ctctccttcg acgaacggca tcacatagta
      541 gaggaaaccg cccgcgtcgc cggaatcata gagcggcagg atgtgaggat gctgcagccg
      601 ggccgagagt tcgatctccc ggaggaaccg ctccgagccg atcgtagccg cgagttccgg
      661 ccgcagcacc ttgatggcga ccgggcgctg atgcttgatg tcggtggcgc gaaagaccgt
      721 ggccattccg ccttcaccag ccaggccttc caccgcataa cggccggcca gggccgtagt
      781 caggcgctgt ttcaggtcac tcatcgatgt gccaggtcgg gacatcagaa ggtaccgggg
      841 gactggtgca gggggaagcc aaaacgtctc tctgggcacg accggttttc cgactttctc
      901 gtcgcatcgc gaactctggg aaaccgctgc agccgggcga cgtaggtaag gtatgacgcc
      961 atttgtaacg tcatctcggc agaagaccgt gagccagctg atcctccagg ccctcgcagt
     1021 ggggccgcgg gattcggctg agctgttgcg ggcgttgtca gatcgcgcca gcctgccgaa
     1081 ccattgggat cccaacgcac tcgatgccat tctccgccga ctgatgcagc ggggattcgt
     1141 ggaagcgcac tgggaattgc ggggcggcgc cggcgggcga cggtatcatc tgacccgtct
     1201 gggagagcag cggctggcgc tggcgccgcc cgatccggat gggagcctgg ccgccgaatc
     1261 ggagtgggtc acccgatcgc tggtcgacag ctacggcgtg atccggccgc tgggccgggg
     1321 cgccaccggt gcggtgtatc tcgcgctcga ccgcgtgctc cagcgctacg tcgccgtgaa
     1381 agtgctgcag cgccagctgg cgcaggatcc ggcgatgcgg gagcgcttcc tgcgcgaggc
     1441 ccgtaccaac gccgggctgg cccaccccgc catcgtgccg gtgttcggca tggtggcctc
     1501 cgccgatctc gtcttcttcg tgatgcagta tgtgccgggc gattccctcg gcgcgctgtt
     1561 gcgggaacgg ggcaagctgc cggcccagga ggcctgccgg attctggccg agcttgccgg
     1621 ggcgctcgac tacgcccacc gccagcgggt ggtgcaccgg gacgtgaagc cggagaacat
     1681 cctgatccat cgcgataccg ggatgccgat gctcaccgac ttcggggtgg cccgggccat
     1741 ctccttcgac gcgatgcaca ccagcgagca gaaagcggag cgggaactct tctggggcac
     1801 gccccacttc atgtcgccgg agcagatctc gggagaggac aacctcgacg gccggagcga
     1861 tctctacgcg ctgggcgcgc tgggctacac catgctgacc ggccgccccc cgttcgaggg
     1921 ccacggtccg gtcgagatcg cggcgcggca gcttaccatg acgccgccgg cgctcggtga
     1981 gctcgcgccc gagtcaccgg aagcgctggt gcacgcgatt acccgctgcc tggcgcggaa
     2041 tccgggagat cgctggcagg acggacgttc gctgcgggag gcgctgatcg gggcgggggt
     2101 gctggcg
//
LOCUS       DATIFF010000889         2485 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1495300, whole genome shotgun sequence.
ACCESSION   DATIFF010000889 DATIFF010000000
VERSION     DATIFF010000889.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2485
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1495300"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            219..>2485
                     /locus_tag="VLD58_13050"
     CDS             219..>2485
                     /locus_tag="VLD58_13050"
                     /inference="COORDINATES: protein motif:HMM:NF013239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIM-barrel domain-containing protein"
                     /protein_id="HSB55283.1"
                     /translation="MCALSGKWRLFFAGLVAAACAAGIGDAARAEVRRFSFPSGSSYL
                     IVEFLDDDLVHFEVSGMGPGPAASAPILTTPQVLKTDYAGPSSLSQSGPGGSILETPE
                     VRVAINPGTLCATVGDRSRNLELTTICPLNLAQEWKGLTIAPGSMQHVYGLGEQFLTP
                     GDPDGDWTGRVRAPGDSFGNQMVNFGGGAAGNAQIPVMYAVGPEGANYALFLDHLYKQ
                     RWDFSGSPWRVETWGDQIRWYVLTGPNLPDLRQDFMELTGRPPVPPKKMFGLWISEYG
                     YDNWQELEGKLTSLRAEKFPVDGFVLDLQWFGGVTASSDQSNMGRVTWDTTRFPNPAA
                     KLARYQSDEGIGILVIEESYVSKGLAEHADLAGRGFLVRAGCATCPPVYLTGNPWWGQ
                     GGMLDWTQDAAGDYWHDLKRQALIADGVLGHWIDLGEPEMYDPTDWVAGVLPGKHGQA
                     DYHNLYSFKWAESIARGYARHGVPRRPFMMARSGAAGIQRFGVGMWSGDIGSNLANLA
                     THLNTQLHMAMSGLDYYGSDIGGFHRGALGGGNLDEMYTRWFATGMLFDVPGRPHTEN
                     LCNCKETAPDRIGHKPSNLFNARLRYELTPYVYALAHRAYLAGEPVMPPLVHYYQNDM
                     AVRELGGEKLLGRDLLVATVTNAGATARDVYLPAGDWIDFHSNQWLHSGGQTFPAQPV
                     VQNGIFRLPMYARAGAIIPKMFVDDQTMNVAGKRTDGTTRGELILRVFASAAPTSFTL
                     YEDDGESVAYQTGGVR"
BASE COUNT          393 a          854 c          856 g          382 t
ORIGIN      
        1 ggttgcccgc tcatgtactg cgcgccggtg gacctcggtc accggtgcat gcgctggtgg
       61 ctgcggtggc gggggcgggt tcccggctga gggtcggctg aaagccttga gttcctggga
      121 caccacgaag ccggcgcccc gttgctcggc gagcgatgtc ttgcgacctc agcagcgaca
      181 gcggtgcgag acctgctggt gagggcagga ggggcagcat gtgtgcgctt tcagggaagt
      241 ggcggctgtt cttcgccggg ctcgtcgcgg cggcctgcgc ggcaggcatt ggcgacgccg
      301 ctcgggcgga ggtccggcgg ttctcgtttc catccggcag tagctacctg atcgtcgagt
      361 tcctggacga cgatctcgtt cacttcgaag tctcggggat ggggccgggc cccgccgcgt
      421 cggccccgat cctcaccacg ccccaggtcc tcaagaccga ctacgctggt ccgagcagcc
      481 tgtcccagtc cgggcccggg gggagcatcc tggagacgcc cgaggtccgc gtggccatca
      541 atccgggaac cctgtgcgcg acggtgggcg acaggtccag gaacctggag ctgacgacga
      601 tctgccccct caacctcgcc caggaatgga aggggctgac gatcgcaccg gggagcatgc
      661 agcacgtcta cggcctcggc gagcagttcc tcacgccggg cgatcccgac ggcgactgga
      721 cggggagggt gcgcgcgccg ggcgacagct tcggcaacca gatggtgaat ttcggcggag
      781 gcgccgccgg caacgcgcag atccccgtca tgtacgcggt cggccccgag ggcgccaact
      841 acgccctctt cctcgatcac ctctacaagc agcgctggga cttctcgggg tctccctggc
      901 gggtggagac ctggggcgac cagatccgct ggtacgtcct gaccggcccc aacctgcccg
      961 atctgcggca ggacttcatg gagctgaccg gccggccgcc ggttccgccg aagaagatgt
     1021 tcggcctgtg gatctcggag tatggctacg acaactggca ggagctggag ggcaagctca
     1081 ccagcctgcg cgccgagaag ttcccggtgg acggcttcgt cctcgacctg cagtggttcg
     1141 gcggcgtcac cgccagctcc gaccagagca acatgggccg ggtcacgtgg gacacgaccc
     1201 gcttccccaa tcccgcggcc aagctcgccc gctaccagag cgacgagggg atcggcatcc
     1261 tcgtcatcga ggagtcctac gtgagcaagg gtctggccga gcacgccgac ctggccggcc
     1321 gcggctttct cgtccgggcc ggctgcgcca cctgcccgcc ggtgtacctc accggcaacc
     1381 cctggtgggg ccagggcggc atgctggact ggacgcagga tgcggccggc gactactggc
     1441 acgatctcaa gcgccaggcg ctgatcgccg acggcgtcct cggccactgg atcgatctcg
     1501 gcgaaccgga gatgtacgac ccgaccgact gggtggcggg cgtcctgccc ggcaagcacg
     1561 gacaggccga ctaccacaac ctctacagtt tcaagtgggc ggagagcatc gcccgcggct
     1621 acgcccgcca cggcgtgccg cggcggccgt tcatgatggc gcggtccggc gcggccggca
     1681 tccagcgctt cggcgtcggc atgtggtcgg gcgacatcgg ctccaacctc gccaacctcg
     1741 cgacccatct gaacacccag ttgcacatgg cgatgtcggg tctcgactac tacgggtccg
     1801 acatcggcgg cttccaccgc ggcgccctgg ggggcggcaa tctcgatgag atgtacaccc
     1861 ggtggttcgc caccgggatg ctcttcgacg tgccgggacg gccccacacc gagaacctgt
     1921 gcaactgcaa ggagacggcg ccggatcgca tcggccacaa gccgagcaac ctgttcaacg
     1981 cccgcctgcg ctacgagctg acgccgtacg tgtacgcgct ggcgcaccgc gcctacctgg
     2041 ccggcgagcc ggtcatgccg ccgctcgtcc attactatca gaacgacatg gccgtgcgcg
     2101 agctgggggg cgagaagctc ctcggtcgcg atctgctcgt cgccaccgtg accaacgccg
     2161 gcgcgaccgc gcgggacgta tacctacccg ccggcgactg gatcgacttc cactcgaacc
     2221 agtggctgca cagcggcggc caaacgttcc cggcgcagcc ggtggtccag aacgggatct
     2281 tccggctccc gatgtatgcg cgggcgggcg cgatcatccc caagatgttc gtcgatgacc
     2341 agaccatgaa tgttgccggc aagcgcacgg acgggaccac gcggggcgag ctgatcctcc
     2401 gggtcttcgc gtcggcggca ccgacctcgt tcacgctgta cgaggacgac ggcgagagcg
     2461 tcgcctatca gaccggcggg gtgcg
//
LOCUS       DATIFF010000890         1423 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_571887, whole genome shotgun sequence.
ACCESSION   DATIFF010000890 DATIFF010000000
VERSION     DATIFF010000890.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1423
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_571887"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            298..>1423
                     /gene="asnB"
                     /locus_tag="VLD58_13055"
     CDS             298..>1423
                     /gene="asnB"
                     /locus_tag="VLD58_13055"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HSB55284.1"
                     /translation="MCGIVAMFSRRGPVSRDALERATRVLHHRGPDGQRIWISPDGTV
                     GLGHARLSIIDLAHGQQPIASEDDRTHIVANGEFYDFESIQRGLESRGHHLRTHSDSE
                     IALHLYEELGTHSLHQLRGEFAFAIWDAAHHTLFAARDRFGIKPLFYAEHDGIIYLAS
                     EVKALFAAGVPARWDGEMVIRGVDVSGSPHRTIYHGVQQVPPGHYLLVTERHLQLACY
                     WDFHYPTAGSQPRRSDGEYAEEFRAALDEAVRLRLRADVPVGCYLSGGLDSCAVLGLA
                     ARHHPEPIHAFTLTFERAEYDEGPIATEMARHCGARFYPIPIRQDDLADHFADATAQT
                     ETFCLNAHGVAKYLLSRAVRDAGYKVVLTGEGSDEILGGYA"
BASE COUNT          235 a          521 c          458 g          209 t
ORIGIN      
        1 tcgacgccgg ccggatgacc gccaagggat acggtcccac caagccggtg gccgacaaca
       61 agacggttgc tggacgcgcc gccaaccgcc gggtggagct gaccaggacc aactaggctg
      121 gaccgggcgc gcaaagccca gttgaagtgc accacagagc ccccgtcggc cttgcggccg
      181 gcggggcatc gtccacgatc ggctgtgggg gtcgaggggt cacgggtcaa cagccctcga
      241 cccttgaccc ccgaccttta tcccgtacac tcagccaccc ccaaccgtca ggcccccatg
      301 tgcggcatcg tcgcgatgtt ctcccgacgc ggtcccgtct cccgcgacgc gctggagcgg
      361 gccacccggg tgctccatca ccgcggcccc gatggccagc gcatctggat ctcccctgac
      421 ggcacggtcg ggctggggca cgcccggctc agcatcatcg acctcgccca cgggcagcag
      481 cccatcgcga gcgaagacga ccgcacccac attgtcgcca acggcgagtt ctacgacttc
      541 gagtcgatcc agcggggact cgagtcgcgg ggccatcacc tccgcaccca ctccgacagc
      601 gagatcgcgc tccacctcta cgaggagctg ggcacccact cgctgcacca gctccggggc
      661 gagttcgcct ttgcaatctg ggacgcggcg caccacaccc tcttcgccgc ccgcgaccgg
      721 ttcggcatca agccactctt ctacgccgag cacgacggga tcatctacct cgcatcggag
      781 gtgaaggcgc tcttcgcggc cggagtgccg gcacggtggg acggggagat ggtgattcgt
      841 ggcgtcgatg tcagcggcag tccccatcgc accatctatc acggggtgca gcaggtcccg
      901 ccgggtcact acctgctggt caccgaacgg catctccagc tcgcctgcta ctgggacttc
      961 cactacccga ctgcgggaag ccagccgcgc cgctccgatg gcgagtacgc cgaggagttc
     1021 cgcgcggcgc tggacgaggc ggtccggctc cggctccggg ccgatgtgcc ggtagggtgc
     1081 tacctgagcg gcgggctcga cagctgcgcg gtgctggggc tggcagcgcg gcatcatccc
     1141 gagccgatcc acgccttcac gctgaccttc gaacgggcgg agtacgacga aggccccatc
     1201 gccaccgaga tggcgcggca ctgcggcgcc aggttctatc ccatcccgat ccggcaggat
     1261 gatctcgccg atcacttcgc cgacgccacg gcccagaccg agaccttctg cctcaacgct
     1321 cacggcgtcg ccaagtacct gctgagccgc gcggtgcggg atgccgggta caaagtggtg
     1381 ctcaccggcg aggggtcgga cgagatcctg ggaggttacg ccc
//
LOCUS       DATIFF010000891         1238 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1495377, whole genome shotgun sequence.
ACCESSION   DATIFF010000891 DATIFF010000000
VERSION     DATIFF010000891.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1238
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1495377"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..826)
                     /gene="rsmH"
                     /locus_tag="VLD58_13060"
     CDS             complement(<1..826)
                     /gene="rsmH"
                     /locus_tag="VLD58_13060"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: protein motif:HMM:NF013919.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HSB55285.1"
                     /translation="MTDASAYHVPVLAERVLEAAGGARRAVDATLGGGGHSALLRSRG
                     IEVLAIDRDPDALAAAQARLGHEGITYIQGAYGDEPALEAVARFQPDFILMDLGVSSH
                     QLDREERGFSFRPGAPLDMRMEQEGASAADVLNESSEQELRTIFADYGDEPRAAALAR
                     EVVRRRAKEDFATSDHLVNAIRAVLGPRSGPGDFARLFQAVRIAVNDELEGLGRALPA
                     FRDALTPGGRLAVISYHSGEDRLVKHSFQEWSRSCVCPPGAPLCTCRGRALGRLEPR"
     gene            complement(899..973)
                     /locus_tag="VLD58_13065"
     tRNA            complement(899..973)
                     /locus_tag="VLD58_13065"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(936..938),aa:Asp,seq:gtc)
BASE COUNT          204 a          440 c          413 g          181 t
ORIGIN      
        1 tccggggttc gagccggccc agcgctcgcc cgcggcaggt gcacagcggg gcgccggggg
       61 gacacacgca gctccggctc cactcctgaa agctgtgctt caccagccga tcttcccctg
      121 aatgataact gataacggcc aatctcccac cgggggtaag cgcgtcgcgg aaggccggga
      181 gggcccggcc gaggccctcg agctcatcgt tgaccgcgat ccgcaccgcc tggaagagcc
      241 gggcgaagtc ccccggcccg ctccgggggc caaggacggc ccggatggcg ttcaccaggt
      301 ggtcgctggt ggcgaaatcc tccttcgccc tccgccgcac cacctcccgc gccagcgccg
      361 cggcccgcgg ttcgtcccca tagtcagcga agatggtccg gagttcctgc tccgaggact
      421 cattgaggac atccgccgcc gatgccccct cctgctccat ccgcatgtcg agcggagcac
      481 ctggccggaa actgaacccg cgctcttccc ggtcgagctg gtgggaagag acgccgagat
      541 ccatcaggat gaagtcgggc tggaagcggg cgacggcctc gagcgcaggc tcgtccccgt
      601 acgcgccctg gatgtaggtg atcccttcat gacccagccg tgcctgggcg gccgccagcg
      661 catcgggatc gcggtcgatc gccagcactt cgatgccgcg gcttcggagc agcgccgaat
      721 gcccgccgcc acccagcgtg gcatccaccg cccgccgggc accccccgcc gcctcgagca
      781 cgcgctcggc gagaactggg acgtggtagg cggaggcgtc tgtcatgagc ggcacgatcc
      841 tggaaaacga gacaccccgc ctgcctgaag cgggcggggt gcgcggtccg gattggagcg
      901 gggctgacgg ggctcgaacc cgcgacctcc gcagtgacag tgcggcactc taaccaagct
      961 gagctacagc cccagaacgc gggccgagaa tatagagaca atggccccgg aacggtagct
     1021 gtaaccccgt tctgtcattc cgagccgccg agcggctcgg aatgaccgcg gggccgtcac
     1081 ttgcagtaga tcttgatcat cgaggcggtc cgcggcttga gcgacgtgag atatccaacc
     1141 agctgcttgt aaaccttctc gttgcccgcg ccctgcggcg tcgcgatgta cggagccgcg
     1201 gcggtgaggg ccccatcggc ctcggcctcg agcgcgtc
//
LOCUS       DATIFF010000892         1682 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1956546, whole genome shotgun sequence.
ACCESSION   DATIFF010000892 DATIFF010000000
VERSION     DATIFF010000892.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1682
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1956546"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..426
                     /locus_tag="VLD58_13070"
     CDS             <1..426
                     /locus_tag="VLD58_13070"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSB55286.1"
                     /translation="DGAAAAWRRFRLPQSPREAMVRLGVGGMVEFRRARSLEVLSESG
                     DPFDLIFLDGDHRLETVVAEIPLALRRLRPGGLVLLHDFFPGLRALWPDGKVIDGPER
                     AVRRLRRAGWPIAARPLGDLPWPTKQGTSRTSLAVLGRA"
     gene            complement(476..907)
                     /locus_tag="VLD58_13075"
     CDS             complement(476..907)
                     /locus_tag="VLD58_13075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55287.1"
                     /translation="MREQNLKALTTLLEEAAAASSGGYRLTSRSIVGDPTRPIFNDPA
                     LLAEWLVEAGGVLVPSAVTEQEAKDLLHRKPEALFARVPEVSEGSWFREGLRRIASDS
                     PSGSLDDEEEPILCLKGTHRWGVGSSGAASGSGGVASPPAL"
     gene            complement(1144..1602)
                     /locus_tag="VLD58_13080"
     CDS             complement(1144..1602)
                     /locus_tag="VLD58_13080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55288.1"
                     /translation="MRIRDSLLLLATLTAVACGGDGGTSPTGPANVAGTWSFEAHGLT
                     TAGSDVKCGITGSLQMAQEGTLVSGSYIIDRITCTSPAGTEVLPGPWGGSIVNGTVEG
                     NTVHFHFDTDDVDQHGTVSGNRISGTCTWRYEVDGGGYLTLTGNWSATRT"
BASE COUNT          251 a          595 c          556 g          280 t
ORIGIN      
        1 gacggggccg ccgccgcgtg gcgtcggttc cgcctgcccc agtcgccgcg ggaggcgatg
       61 gtgcggctcg gtgtcggcgg gatggtggag ttccggcggg cccgctcgct cgaggtgttg
      121 tcagagtcgg gcgacccgtt cgacctgatc tttctcgacg gcgaccaccg gctcgagacg
      181 gtggtcgcgg agatcccgct ggcgctccgg cggctccgtc cgggcgggct ggtgttgctg
      241 cacgatttct ttcccggcct ccgtgccctc tggccggacg gcaaggtgat cgacggaccc
      301 gagcgcgcgg tgcggcggct ccggcgcgcc ggctggccga tcgcggcccg gccgctgggc
      361 gacctgccct ggcccaccaa gcaggggacg tcgcggacga gcctggcggt gctggggcga
      421 gcgtaaaccg ccggcggccg cgggaccgcg gccgcaggag gaagtgagcg atcgatcaga
      481 gagccggtgg tgacgcgacg ccgccgctac cggaagctgc gccggatgaa ccgacgcccc
      541 accggtgggt ccccttcaga cacaggatcg gctcctcctc gtcatcgaga cttccggagg
      601 gactgtcact ggcgatccgg cgcaaaccct cccggaacca gcttccctcc gacacctcgg
      661 gcaccctggc gaacagcgcc tccggcttcc ggtggaggag atccttcgcc tcctgctcgg
      721 tgaccgcgct cggcaccagg acgccgccgg cctcgaccag ccactcggcc agcagcgcgg
      781 ggtcgttgaa gatgggacgg gtgggatccc cgacgatgct ccgactggtg agccggtagc
      841 cgccgctgga ggccgcggcg gcctcctcga gcaaggtcgt caatgccttc agattctgct
      901 cgcgcataac tcctccgatt tcaccgccgc cgttgatgcc cggcggatat gctactgcca
      961 tgattctgaa gcgggggtga aaaggcgcgt gaatctttgc tcatcgcgga ccctcgcggc
     1021 gcgggctccg ggtctccaaa cgcgaaagcc accgtccggc gagcggcggt ggccatgcgt
     1081 tggttgcctg tggtgccgtg ctgcagtgca ccgcgtagga tcgaacctac aacggattcc
     1141 ggttcacgta cgcgttgccg accagttgcc cgtaagcgtc aagtacccgc cgccgtcaac
     1201 ctcgtagcgc caggtgcagg tcccgctgat gcggttgccc gaaaccgtgc cgtgctggtc
     1261 gacatcatcg gtgtcgaagt gaaaatggac cgtgttcccc tccacggtcc cattcacgat
     1321 cgaaccgccc cacggccccg gcagcacctc ggttcccgcc ggcgatgtgc aggtaatcct
     1381 atcgatgata tagctaccgc tcaccagagt gccctcttgt gccatctgca gactgccggt
     1441 gatcccacac ttcacgtctg accccgctgt cgtcaaaccg tgcgcctcga agctccaggt
     1501 acccgccacg ttcgccggtc cggttggtga cgtacctccg tcgccgccac aggcgactgc
     1561 ggtcagggtt gccaggagca gcagcgagtc tcggatacgc atttgcgcct cctcacccga
     1621 gccccgccct ctgcccgtgt cccgcacaac gcgctcgggc cagcgccaaa gtacaaacaa
     1681 gc
//
LOCUS       DATIFF010000893         1161 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1188538, whole genome shotgun sequence.
ACCESSION   DATIFF010000893 DATIFF010000000
VERSION     DATIFF010000893.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1188538"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..242)
                     /locus_tag="VLD58_13085"
     CDS             complement(<1..242)
                     /locus_tag="VLD58_13085"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:NF013915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase family
                     protein"
                     /protein_id="HSB55289.1"
                     /translation="MTIYPFILHLGPLEITGYGIMMMVGFLMGGWLITLQLRERGLYE
                     EYAADITVAAVVGGIIGAKVWYWAVNGGSLFSRGGLV"
     gene            complement(239..>1161)
                     /gene="tsaD"
                     /locus_tag="VLD58_13090"
     CDS             complement(239..>1161)
                     /gene="tsaD"
                     /locus_tag="VLD58_13090"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:TIGR03723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HSB55290.1"
                     /translation="ELASRAHLATLGPVIDQALAEGGVSLDELGSIAVTAGPGLVGAL
                     LVGVMYAKTLALQLDIPLIGVHHLEGHLFAAALEQPDVAPPFVALLVSGGHTLLLDVR
                     AWGQYRLLGSTRDDAAGEAFDKVATLLGLGYPGGPAIERLAALGQPGRYRFPRPMLAA
                     LADEGADRFAFSFSGLKTALLRAVRGSDDLERDRADLARGFQDAVLEVLVEKAALAVE
                     LLGHPTLVLGGGVACNRALRETAARRLGGVARVVSASNRLNTDNAAMIGAAGLFRLHH
                     GERSGPDLEPRADLPFPGLAADPLLQGSVR"
BASE COUNT          189 a          418 c          401 g          153 t
ORIGIN      
        1 accagaccgc cacgggagaa caggctgcct ccgttcactg cccagtacca cactttggcg
       61 ccgatgatcc cgcccacgac cgccgccacc gtgatatcgg ccgcgtactc ctcgtagagg
      121 ccgcgttccc gcagctgcag ggtgatgagc cacccgccca tgaggaatcc caccatcatc
      181 atgatgccgt agccggtgat ctccagcggg ccgagatgga gaatgaacgg ataaatcgtc
      241 atcggacgct tccctgcagg agaggatcgg ctgcgaggcc ggggaacggg aggtcggcgc
      301 ggggctccag gtcgggcccg ctgcgctcgc cgtggtgaag ccggaacagc ccggcggcac
      361 cgatcatggc cgcgttgtcg gtgttgagcc ggttggatgc gctcacaacc cgcgcgaccc
      421 cgccgaggcg ccgcgcggct gtctcgcgga gggcgcggtt gcacgccacc ccgccgccca
      481 acaccagggt cggatggccc agaagctcca ccgccagcgc ggccttctcg accaggacct
      541 cgagcacggc gtcctggaag ccccgggcca gatcggcccg gtcgcgctcc aggtcgtcgc
      601 tgccgcgcac cgcccggagc agggcggtct tgagcccgct gaaggagaag gcgaagcggt
      661 cggcgccttc atccgccagc gcggccagca tcggccgcgg gaagcgatac cgtccgggct
      721 ggcccagcgc ggcgaggcgc tcgatcgccg gtccgcccgg gtaacccagt ccgagcaggg
      781 tggcgacctt gtcgaacgcc tcgccggccg cgtcatcccg ggtggacccg agcagacggt
      841 actgccccca ggctcgaacg tcgagcagga gggtgtgtcc cccgctcacc aggagcgcca
      901 cgaagggagg agcgacgtcg ggctgctcca gcgccgcggc aaagagatgg ccttccagat
      961 ggtgcacccc gatgagggga atgtcgagct ggagcgcgag cgtctttgcg tacatgactc
     1021 ccaccagcag ggctcccacc agtcccgggc cggcggtcac ggcgatgctg cccagctcgt
     1081 ccaggctgac cccgccttcg gccagcgcct gatcgatcac cgggcccagg gttgcgagat
     1141 gggcccgact ggccagctcc g
//
LOCUS       DATIFF010000894         1268 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_417523, whole genome shotgun sequence.
ACCESSION   DATIFF010000894 DATIFF010000000
VERSION     DATIFF010000894.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1268
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_417523"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..>1268)
                     /locus_tag="VLD58_13095"
     CDS             complement(64..>1268)
                     /locus_tag="VLD58_13095"
                     /inference="COORDINATES: protein motif:HMM:NF015644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UPF0182 family protein"
                     /protein_id="HSB55291.1"
                     /translation="RLLLAARFGSSKILLSQDITNDSRVLYYRHVMARARKALPFLRF
                     DRDPYLVVAADGTLKWILDAYTLSDAYPYAQRLGDGTTYMRNSVKLVIDAYDGSLKAY
                     LSAPADPLIRTWARIFPGIFLPLDSMPADLRAHIRYPDDIYRVQTALYTTYHMDAPED
                     FYHREDQWQIPTVVDSGATVPFMRHIVMRLPEESKAEFIYMVPFTPRGKDNLAAWMVA
                     RNDGAEYGKLRVYRLSRQSLVYGPTQIENRINQDTEISRQISLWDQRGSQVLRGDLLV
                     IPIERALLYVQPLYLQAEGGRIPELKRVVVAYQNQVVMEETLDRALVTLFGGEAARSP
                     AAVPADSTAAPAAAAPVRPAESLVEEARRHYDAAIAAQRAGDWSRYGEEIRRLGEVLQ
                     RLGAARRP"
BASE COUNT          204 a          422 c          442 g          200 t
ORIGIN      
        1 atccgggttg gcgccgctcc ggcggaccca aggctccatc accggggcgc ccgcgctcgg
       61 gactcaggga cgccgggcag cccccaaccg ctggagaacc tcgcccaggc gccgaatctc
      121 ctcaccatac cgcgaccagt ccccggcccg ctgcgcggcg atcgccgcgt cgtagtggcg
      181 ccgggcctcc tcgaccagac tctcggctgg ccgaaccggc gccgccgccg cgggcgccgc
      241 ggtgctgtcg gccggaaccg ccgccgggct ccgggcggct tccccgccga acagggtcac
      301 gagggcccgg tccagcgtct cctccatcac cacctggttc tggtaggcca ccacgacccg
      361 cttgagctcg ggaatccggc cgccttcggc ctggaggtag agcggctgga cgtagagcag
      421 cgcccgctcg atcggaatga ccaggagatc accccggagt acctgcgatc cgcgctggtc
      481 ccagagcgag atctggcgcg agatctcggt gtcctggttg atccggttct cgatctgcgt
      541 cggcccgtac accaggctct gccgcgacag ccggtacacc cgcagcttcc cgtactccgc
      601 gccgtcgttc cgcgccacca tccaggccgc caggttgtcc ttcccccgcg gggtgaaggg
      661 caccatgtag atgaactcgg ccttggattc ctcggggagc cgcatgacga tgtgtcgcat
      721 gaacggcacc gtggcaccgg agtcgaccac ggtggggatc tgccactggt cctcccggtg
      781 gtagaaatcc tccggggcgt ccatatggta ggtggtatag agggcggttt ggacccggta
      841 aatgtcatcc ggataccgga tgtgcgctct caggtcggcg ggcatgctgt ccaggggaag
      901 gaagatgccg ggaaagatgc gagcccaggt ccggatcagc gggtcggccg gcgcgctcag
      961 gtaggccttc agcgatccgt cgtacgcgtc gatgacgagc ttgacgctgt tccgcatgta
     1021 ggtggtgccg tcgccgagcc gctgggcata gggataggcg tccgaaaggg tgtaggcatc
     1081 gaggatccac ttgagggtgc cgtccgccgc aacgacgaga tacgggtcgc gatcgaaccg
     1141 gaggaacggc agcgccttcc gggcccgggc catgacatgg cggtaataca gcacccggct
     1201 gtcattggtg atgtcctgcg agaggaggat cttcgaggag ccgaaccggg cggcgaggag
     1261 aaggcggc
//
LOCUS       DATIFF010000895         1687 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1648333, whole genome shotgun sequence.
ACCESSION   DATIFF010000895 DATIFF010000000
VERSION     DATIFF010000895.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1648333"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..294)
                     /locus_tag="VLD58_13100"
     CDS             complement(<1..294)
                     /locus_tag="VLD58_13100"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HSB55292.1"
                     /translation="MTAAPVVPVKPPEVEELVDEYLHRPIARRIVDLLVHTPITPNQI
                     TLVAALVGVIAGVLMALSVGRPDRLLLSGLLLFAAVVLDCCDGQLARRKKISST"
     gene            complement(305..1033)
                     /locus_tag="VLD58_13105"
     CDS             complement(305..1033)
                     /locus_tag="VLD58_13105"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocholine cytidylyltransferase family
                     protein"
                     /protein_id="HSB55293.1"
                     /translation="MDYQAVILAAGTGTRLRPLTENTPKCLLDVGGQTILARQLERIA
                     AAGITRAVIVTGYLADQVEEHLQRHPPRIEVALAPNPDFATTGNCMSVLAARPQLTGR
                     GMVLCDGDVVLTGDALRRLVQLTTPCGLLLDTETRLGEEEMKAQLDERGTVRRLSKQV
                     NPAEAAGESIGVQKVGGPALPILWATLEAMRDSGDTSGYYEDAFQRMMQAGVTFQTVS
                     IGHHEWTEIDDLADLEDARARFAR"
     gene            complement(1148..>1687)
                     /locus_tag="VLD58_13110"
     CDS             complement(1148..>1687)
                     /locus_tag="VLD58_13110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55294.1"
                     /translation="IGSSNKCLHGVAGAAFVIARPEIWSETEHVRPRSMYLDLRRYRA
                     AQKENGQTPFTPSVPAVVALETALHELEDQGGVAARRANYHALNGRLRAGLIGLGLKL
                     RFDGSSGAASLTVAQLPPGISFDSLYQDLRVRGFLVYRGKGPLSHDCFLIANMGDISL
                     ETIDRFLETLADIAELPVR"
BASE COUNT          274 a          547 c          604 g          262 t
ORIGIN      
        1 ggtagaggag atcttcttgc ggcgggcgag ctggccgtcg cagcaatcca gcaccaccgc
       61 ggcaaagagc aggaggccgg agagaagcag ccgatccggt cggcccacgc tcagggccat
      121 gagaacgccg gcgatgaccc cgacgagggc ggcgacgagc gtgatctggt taggggtgat
      181 gggggtgtgg accagcagat ccacgatacg ccgggcgata ggacggtgga ggtactcgtc
      241 gaccagctct tcgacttcgg gcggcttgac cgggacgacc ggtgcggccg tcatcgaccc
      301 cggttcacct ggcgaacctt gcccgggcgt cttcgaggtc ggcgaggtca tcaatctccg
      361 tccattcgtg gtgaccaatt gaaacggtct ggaaggtaac gccggcctgc atcatccgct
      421 gaaaggcgtc ctcgtagtag ccgctggtat cgccgctgtc gcgcatggcc tcgagcgtcg
      481 cccagagaat ggggagcgcc gggcctccga ccttctgcac cccgatcgat tctccggccg
      541 cctcggccgg gttcacctgc ttggagaggc gccgcacggt gccccgttca tcgagctggg
      601 ccttcatctc ctcctccccc agccgggtct cggtgtcgag caggagaccg cagggcgtgg
      661 tgagctgcac cagccggcgg agcgcgtcac cggtgaggac cacgtcgccg tcgcagagca
      721 ccatgccacg gccggtcagc tgcggccggg ccgcgagcac gctcatgcag ttgccggtgg
      781 tcgcgaagtc gggattgggc gcgagggcga cctcgatccg gggcgggtgg cgctggagat
      841 gctcctcgac ctggtcggcg agatagccgg tcacgatcac cgcccgggtg atccccgccg
      901 ccgcgatccg ctcgagctgg cgcgcgagga tcgtctgtcc ccccacgtcg agcaggcact
      961 tgggggtgtt ctcggtgagc gggcggaggc gggtgccggt gccggcggcg agaatgacag
     1021 cctggtagtc catgcgccaa cctgtgggag gtgaaaagcg aaaagtgaaa cggaaccgga
     1081 gcctatgctc gattcacgtc tcacttttca ctcgggtcca agaagctgta ccaggctcaa
     1141 cgcccggtca acgcaccggc agttcggcga tgtccgccag ggtctccagg aaacgatcga
     1201 tcgtctccag gctgatgtcg cccatgttgg cgatcaggaa gcagtcgtgc gagagcggcc
     1261 ccttgccccg gtagaccagg aagccgcgca cccgcaggtc ctggtagagc gagtcgaacg
     1321 agatgcccgg gggcagttgc gccacggtga gcgacgcggc cccgctcgac ccgtcgaacc
     1381 ggagcttgag ccccagcccg atgaggccgg cccggagccg gccattgagc gcgtgatagt
     1441 tggcccggcg ggcggcgacc ccaccctggt cttccagctc gtgcagcgcg gtctcgagcg
     1501 ccaccaccgc cggcaccgac ggggtgaacg gggtctggcc gttctccttc tgcgccgcgc
     1561 gatagcggcg gaggtcgagg tacatcgagc ggggccggac atgctcggtc tcgctccaga
     1621 tctcgggccg ggcgatcacg aaggcggccc cggcgacgcc gtggaggcac ttgttggagc
     1681 tgccgat
//
LOCUS       DATIFF010000896         1121 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_265858, whole genome shotgun sequence.
ACCESSION   DATIFF010000896 DATIFF010000000
VERSION     DATIFF010000896.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_265858"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..407
                     /locus_tag="VLD58_13115"
     CDS             <1..407
                     /locus_tag="VLD58_13115"
                     /inference="COORDINATES: protein motif:HMM:NF013300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004560 - alpha-L-fucosidase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-L-fucosidase"
                     /protein_id="HSB55295.1"
                     /translation="GNLLLNVGPRPDGTFPDESVERLRAMGQWMAVNGEAIRGTTASP
                     FAHAPFRATSKPNRLYLFLPEWPASPLLVPGLRTPVRQATLLADPGRSPLSCVQTDAG
                     MTVTLPVAAPAQVWPVVSLEFDQAPTFTGEPR"
     gene            446..>1121
                     /locus_tag="VLD58_13120"
     CDS             446..>1121
                     /locus_tag="VLD58_13120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HSB55296.1"
                     /translation="MRIALLAAIAGTFACAGRGAGGPDAARLHARAQAVTITRDDWGI
                     AHVHGKTDADAVFGMVYAQAEDDFNRVETNYLNSLGRLAEAEGEGVTVQDLRQKLFMN
                     PDTLKAQYAASPEWLRQLMDAWADGLNYYLATHPDVKPRVITRFEPWMALSFTEGSIG
                     GDIERVSTAELAAFYGDSATQQPPRGGDGELAEPSGSNGIAFAPAITRDHHALLWINP
                     HTSFYFR"
BASE COUNT          179 a          404 c          368 g          170 t
ORIGIN      
        1 gcggaaacct gctgctcaac gtgggccccc ggcccgatgg caccttcccc gacgagagcg
       61 tcgagcggtt gcgcgccatg ggacagtgga tggcagtgaa cggcgaagcg attcggggaa
      121 ccaccgcctc gccgtttgcg cacgcgccgt tccgcgccac ctcgaagccg aaccggctgt
      181 atctctttct tcccgagtgg ccggcctctc cgctgctcgt tccgggcctc cggactccgg
      241 tgcgtcaggc gacgctcctc gccgacccgg ggcggagtcc gctcagctgc gtccagaccg
      301 atgccggcat gactgtcacc ctccccgtgg ctgctcccgc ccaggtctgg ccggtggtga
      361 gcctcgagtt cgaccaggcg cccacattca ccggagagcc ccggtgacgc atcgctatcg
      421 ccatcctcct ggagtgcatc agggaatgag aatcgcactg ctcgctgcca tcgccggaac
      481 cttcgcctgt gccggccgcg gggccggcgg ccccgatgcc gcccgcctgc acgcccgagc
      541 ccaggccgtg acgatcaccc gcgatgactg gggtatcgcc cacgtgcacg ggaagaccga
      601 cgccgacgcg gtcttcggca tggtctacgc ccaggcggag gatgacttca accgggtcga
      661 gaccaactac ctcaactccc tgggccgcct ggcggaggcc gagggagagg gagtgacggt
      721 gcaggacctc cggcagaagt tgttcatgaa cccggatacc ctcaaggcgc agtacgcggc
      781 gagcccggag tggctccgtc aattgatgga tgcctgggcc gacgggctga actactacct
      841 ggcgacgcat cccgacgtga agccgcgggt gatcacgcgg ttcgaaccct ggatggcgct
      901 gtcgttcacc gagggcagca tcggcggcga catcgagcgc gtcagcaccg ccgagctggc
      961 ggcgttctac ggcgacagcg ccacgcaaca gccgccgcgc ggcggcgacg gcgaactggc
     1021 cgagcccagc ggctccaacg gcatcgcgtt cgcgccggcg atcacgcggg accatcacgc
     1081 gctgttgtgg atcaacccgc acacctcgtt ctacttccgc t
//
LOCUS       DATIFF010000897         4737 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1496205, whole genome shotgun sequence.
ACCESSION   DATIFF010000897 DATIFF010000000
VERSION     DATIFF010000897.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4737
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1496205"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..846)
                     /locus_tag="VLD58_13125"
     CDS             complement(<1..846)
                     /locus_tag="VLD58_13125"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSB55297.1"
                     /translation="MATITELTPFINGAHLPLDRRRTDAIRNPFSDQAEVNAAQGTAA
                     DLELAIAAAQSGFAAMKAMPRHARRDLLVRIADVLTRERQSLGTELAKSCGKPITQAL
                     GEVDRAVMTFSFAADEARRFGGEMVPLDVDPRTVGYTGLVHRFPVGPISAITPFNFPL
                     NLLAHKVAPAIAVGSALVVKPPPQCPQLAFRLGQIMAECGLPAGAYNVLHLPIPVAEQ
                     LATDPRFAMLTFTGSPTVGWHLKNVAGKKKVCLELGGNAAAVVHEDAPDLDWTASRLA
                     LGAFAY"
     gene            914..1921
                     /locus_tag="VLD58_13130"
     CDS             914..1921
                     /locus_tag="VLD58_13130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55298.1"
                     /translation="MKPRFLALGGGVVLVLGSLAGMWASAGQAEQRERDRADAALARS
                     AAAFLSVVVPPGPANGYDPARLLASVNNLARASFWPGGFQLALGSVPLLPDTIGLIPV
                     PDSLLRRLDEDRAPVVVRHAAVRAALVPFLDRDRFGMLGWAAAWETVPDSVPSPSAMT
                     LSVLTVVGLLLLLVVQWRPSLMQRRLPLFVAAGAVLILLAVDLRSSVQQTMADAAALR
                     VMTLKRLIEVAATAPGVRQAMLPEIAVGVRVRPVTDTAASTGAVRTDKVTGEVLAVAA
                     TPRTGGSLELALLPEQEGRRRLDRFLALLMGTGLLGLLLMAATMRYSSGTTGNTPLGT
                     A"
     gene            1918..3453
                     /locus_tag="VLD58_13135"
     CDS             1918..3453
                     /locus_tag="VLD58_13135"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB55299.1"
                     /translation="MTATEHTETDAGLGLIGSVAKLLNTGLGAEETLSLVAEALRKGL
                     GSEQVQLWLREPNATTLRAITAPRAPGAPRTSRSFAVLPEAGPETFRLPLLHEGERLG
                     MLEFLPLPAPAATQRILPIVADIIAPFLASIELSEDLAYEVALRSREIEEQRRFITQV
                     IDSLPVGLYVVDRDYRIQIWNRKRELGTQGLRRDEVVGRPVFEVLTRQPPGRLREEFD
                     EVFQTGQARQLELEVGIGGEPKYYRISKIPMRQDGETISHVITIGEDVTEGHVAQQRI
                     LQSEKLAAIGQLAAGIMHEINNPLATIGACVAALENRIADTVPSAQQASVREYLEIID
                     KEVQRCEGIVDGLLDFSRPKGKAKGPVNVSTILEDTLFLLKHHERFRKIEVTRELGEQ
                     LPSVFANAEQLIQVFMAIMLNALDAMEEGGSLMVRSHTNSVHADEVVVEIEDTGAGIP
                     RSELPKIFEPFFTTKPPGRGTGLGLSVCYGIVAEHGGRIEADSQPGRGSVFRVYLPLQ
                     GRE"
     gene            3609..4277
                     /locus_tag="VLD58_13140"
     CDS             3609..4277
                     /locus_tag="VLD58_13140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSB55300.1"
                     /translation="MKILVVEDDRTVGQYVLRGLQEQGFQADLVPDGTEALNASSHGN
                     YDLIVLDLRLPGMTGFEVLRTLRDRGNTTPVLVLTAQDAVDFKVQALRSGADDYVTKP
                     FAFEELLARVEALGRRPKQIAPKSLRVADLELDVGTREVTRAGRRLELTPKEYAVLEY
                     LMRHVGRVMSRTLITEYAWDYHFDPGTNIVDVVINRLRKKVDAGQSQRLIHTVRGVGY
                     VIKA"
     gene            4378..>4737
                     /locus_tag="VLD58_13145"
     CDS             4378..>4737
                     /locus_tag="VLD58_13145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55301.1"
                     /translation="MSSIRSRLTLGYAIALLVSVGAFGGALYFERQRSSIRELDARLS
                     LEGTLAAQYFVTFQQQIGQTLQPDQTPTLAINQVGGYLSAVQDHVVIFDPDRGPIYRN
                     ATASRVFSGPALLQLGAI"
BASE COUNT          739 a         1560 c         1662 g          776 t
ORIGIN      
        1 ataggcaaag gcgcccagtg ccagacgtga ggcggtccag tcgagatcgg gcgcgtcctc
       61 gtgcacgacg gccgcggcgt tgccgcccag ctcgaggcac accttcttct tccctgccac
      121 gttcttgagg tgccagccga ccgtcgggct gccggtgaag gtgagcatgg cgaaccgggg
      181 atcggtcgcg agctgttccg ccaccggaat tgggagatgc agcacgttgt aggcgccggc
      241 gggaaggccg cactcggcca tgatctgtcc cagccggaag gcgagctggg ggcattgcgg
      301 cggcggcttc accaccaggg cgctgccgac cgcgatggcc ggggccactt tgtgggccag
      361 caggttgagc ggaaaattga acggggtgat ggcgctgatc gggccgaccg ggaaacgatg
      421 caccagcccg gtgtaaccga cggtgcgggg atcgacatcg agcggcacca tctcgccccc
      481 gaatcggcgg gcttcgtcgg cggcgaagga gaaggtcatg accgcccggt cgacctcgcc
      541 cagggcttga gtgatcggct tgccgcagct cttcgccagc tcagtgccga gggactggcg
      601 ctcccgggta agcacgtcgg caatccggac gaggaggtcg cgccgggcgt ggcgtggcat
      661 ggctttcatc gcggcaaagc ctgactgcgc cgcggcgatg gccaactcca ggtccgcagc
      721 cgttccctgg gccgcattga cttcggcctg atcggagaaa ggattccgga tcgcgtcggt
      781 gcgccgccgg tcgagcggaa ggtgcgcgcc gttgatgaag ggcgtaagct cggtaatggt
      841 cgccattgag gtgtcccggt tcgttccgag ttaaacttac tcccttcatg tccaatcatg
      901 agcggagcgg gtggtgaagc cccgattcct cgccctgggc gggggcgtcg tgctggtgct
      961 cggctcgctg gccggcatgt gggcgagcgc aggccaggcg gagcagcgcg agcgcgaccg
     1021 ggcggatgcc gccctggctc ggagcgcggc ggccttcctc tcggtggtgg tcccgcccgg
     1081 ccccgccaac ggctacgatc cggcgcggct cctcgcctcg gtcaacaacc ttgcccgggc
     1141 ctccttctgg cccggcggct ttcagctggc actcggctcg gtgccgctgc ttcccgacac
     1201 gattggtctc attccggttc cggactcgct gctccgcagg ctcgatgaag accgggcgcc
     1261 ggtggtggtg cgccatgccg cggtgcgtgc cgccctggtg ccgtttctcg accgggaccg
     1321 ctttggcatg ctcggctggg ccgcggcgtg ggagaccgtg ccggactcgg taccctcgcc
     1381 atccgcgatg acgctgagcg tcctgaccgt ggtggggctg ctcctgctcc tggtggtgca
     1441 gtggcgaccg agtctcatgc agcggaggtt gccgctcttc gtggcggcag gtgcggtgct
     1501 gatcctgctc gccgtcgacc tccgttcgag tgtgcagcag acgatggccg acgctgcggc
     1561 gctccgggtg atgaccctca agcggctgat cgaggtggcg gccacggcgc cgggtgtgcg
     1621 ccaggcgatg ctcccggaga tcgcggtcgg ggttcgggtg cggccagtga ccgatacggc
     1681 ggccagcacg ggcgccgtcc gaaccgacaa ggtcaccggt gaggtactgg cagtcgccgc
     1741 cacgccacgg accgggggat cgcttgagct ggcgctcttg ccggagcagg aaggacgccg
     1801 gcggctggac cggtttctgg cgctcctgat ggggaccggc ctcctcgggc tgctcctgat
     1861 ggccgcgacc atgcgatatt ccagcggtac caccggcaac acccctctgg gaaccgcatg
     1921 accgctaccg aacacaccga gacagacgcc ggcctgggat tgatcggctc ggtcgcgaag
     1981 ctcctcaata ccgggctggg cgcggaagag acgctctcgc tcgtggccga ggcgcttcgc
     2041 aaggggctgg gctcggagca ggtccagctc tggctccggg aaccgaacgc aaccacgctc
     2101 cgggccatca ccgcgccccg ggcgccgggc gcgccccgca ccagccggtc gttcgcggtg
     2161 ctgccggagg ccgggcccga gaccttccgg ctgccgctcc tgcacgaagg ggagcggctg
     2221 gggatgctcg agttcctgcc gctgccggcg ccggcggcaa cccagcggat cctccccatc
     2281 gtcgccgaca tcatcgctcc cttcctcgcc tcgatcgagc tgtcggaaga cctggcctat
     2341 gaggtggcgc tccggtcgcg cgagatcgag gagcagcggc gcttcatcac gcaggtgatc
     2401 gacagtctcc cggtggggct gtatgtcgtc gaccgcgatt accggatcca gatctggaac
     2461 cggaagcggg agctggggac ccagggtctc cggcgggacg aggtggtggg acggccggtc
     2521 ttcgaggtgc tcacccgcca gccccccggc cgcctgcggg aggagttcga cgaggtcttc
     2581 cagaccgggc aggcccgcca gctcgaactc gaagtcggga tcgggggcga gcccaagtac
     2641 taccggatca gcaagatccc gatgcggcag gatggcgaga ccatcagcca cgtgatcacc
     2701 atcggcgagg acgtcaccga gggccacgtg gcgcagcagc ggattctgca gagcgagaag
     2761 ctcgccgcca tcggccagct cgcggccggc atcatgcacg agatcaacaa cccgctcgcg
     2821 accatcgggg cctgcgtggc ggcgctggag aaccggatcg ccgacaccgt gccatcggcc
     2881 cagcaggcct cggtgcggga gtatctcgag atcatcgaca aggaagtgca gcgctgcgag
     2941 gggatcgtgg acgggctgct cgatttcagc cgtcccaagg gcaaggccaa gggcccggtc
     3001 aacgtctcca ccatcctgga agacaccctc ttcctgctca agcatcacga gcgcttccgg
     3061 aagatcgagg tcacccgcga gcttggcgag cagctcccgt cggtctttgc caacgcggag
     3121 cagttgatcc aggtattcat ggcgatcatg ctgaacgcgc tcgacgccat ggaagagggc
     3181 ggcagtctga tggtgcgctc ccacaccaac tcggtccacg cggatgaagt ggtggtggag
     3241 atcgaggaca ccggcgcggg cattccccgg tcggagctgc ccaagatctt cgagccgttc
     3301 ttcaccacca agccaccggg gcgcggcacc ggtctcgggc tgtcggtctg ctacggcatc
     3361 gtggcggagc atggcgggcg gatcgaagcg gacagccagc cggggcgggg atcggtgttc
     3421 cgggtgtatc tcccgttgca ggggcgggag taggcctttg gcctttggcc tttggccgtt
     3481 agccattagc cgttagccgt tagcaagagc atgtgatgct ggttcatcat cgatggtctg
     3541 ccccaagccg gaatcgctaa tggctaacgg ccaacggcta gtggccagac cacctactcg
     3601 cccttcgaat gaaaatcctc gtcgtcgaag acgaccgcac cgtcggccag tacgtgctgc
     3661 gcgggctcca ggagcagggc tttcaggccg acctggtgcc cgatggcacg gaggcgctca
     3721 acgccagctc ccacggcaac tacgatctca tcgtgctgga cctccggctg cctgggatga
     3781 ccggcttcga ggtgttgcgc acgcttcggg accgggggaa caccacgccg gtgctggtgc
     3841 tgaccgcgca ggatgcggtc gacttcaagg tgcaggcgct ccgctccggc gcggacgact
     3901 acgtcaccaa gccgttcgcc ttcgaggagc tgctggcgcg ggtcgaggcg ctgggccggc
     3961 ggcccaagca gatcgcgccc aagagcctcc gggtggccga tctcgagctc gacgtcggga
     4021 cccgtgaggt gacccgggcc ggccgccggc tcgaactcac gcccaaggag tatgcggtgc
     4081 tcgagtacct gatgcggcat gtgggccggg tcatgtcccg caccctcatc accgagtacg
     4141 cctgggacta tcatttcgac cccgggacca acatcgtgga cgtggtgatc aatcggctcc
     4201 gcaagaaggt ggatgccgga cagtcacagc ggctgatcca cacggtgcgg ggggtggggt
     4261 atgtcatcaa ggcttagacc ggaggccgga ggccggaggc gggcggagac tggagccctg
     4321 gctccaagcc cgctccggcc tgcgccggcc accggcctcc agcctccggc ctagtatatg
     4381 tcctccattc gcagcaggct caccctcggc tacgccatcg ccctcctggt ttcggtgggc
     4441 gccttcgggg gcgcgctgta cttcgagcgg cagcggtcga gcatccggga actggatgcc
     4501 cggttgagcc tcgaggggac tctcgccgcc cagtacttcg tcaccttcca gcagcagatc
     4561 ggccagaccc ttcagcccga ccagacgccg accctcgcca tcaatcaggt gggtgggtat
     4621 ctgagcgcgg tgcaggatca tgtcgtcatc ttcgatcccg accgcggccc gatctaccgg
     4681 aacgcgaccg cgagccgagt gttcagtggc ccggcgctgc tccagcttgg agccatc
//
LOCUS       DATIFF010000898         1227 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1802909, whole genome shotgun sequence.
ACCESSION   DATIFF010000898 DATIFF010000000
VERSION     DATIFF010000898.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1802909"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1227
                     /locus_tag="VLD58_13150"
     CDS             <1..>1227
                     /locus_tag="VLD58_13150"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HSB55302.1"
                     /translation="LATLPALLGSLDRLADAIVQAADEVLGGQHRDQFIVDVYQAGAG
                     TSHNMNCNEVLANRANELLGGERGTYTPVHPNDHVNMAQSTNDVIPTAMRLAALATLP
                     ALLGSLDRLAEVLLAKGDAFDHIVKSGRTHLQDATPIRLGQEFRAYGRTVARHRVKLE
                     QAAEWLRELNIGGTAVGTGINAEPEYPRLMVAHLREMTGLHLEEGKDRVQLMQSMGDV
                     ATFSGALRAYVLDLQKIANDIRLLASGPRTGLAEIVLPAVQPGSSIMPGKVNPSIAEM
                     VNQVCYQAVGLDLTVAMAAEAGQLELNVMMPVITHNIVFAMIIVGNASRVLADKCVAG
                     IEPDEAQCAYWLERSPALVTALAPEIGYAEAAKLAKEALATGLTVRELVLKKKLLEGA
                     KRDAVLDLRAMTELGVP"
BASE COUNT          213 a          418 c          434 g          162 t
ORIGIN      
        1 ctggcgacgc tcccggcgct gctgggctcg ctcgaccggc tggccgacgc catcgtccag
       61 gccgccgacg aagtgctcgg cggccagcac cgcgaccagt tcatcgtaga cgtctaccag
      121 gcgggcgcgg gcaccagcca caacatgaac tgcaacgagg tcctggccaa ccgggcgaac
      181 gagctgctgg gcggcgagcg ggggacctac acgccggtgc acccgaacga tcacgtcaac
      241 atggcgcaga gcaccaacga cgtgatcccc acggcgatga ggctcgccgc gctggcgacg
      301 ctcccggcgc tgctgggctc gctcgaccgg ctggccgagg tcctgctcgc caaaggcgat
      361 gcgttcgatc acatcgtgaa atccgggcgg acgcacctcc aggatgcgac gcccatccgc
      421 ctcggccagg agttccgcgc ctacggccgg accgtggccc ggcaccgggt gaagctggag
      481 caggcggcgg agtggctgcg ggagctgaac atcggcggca ccgcggtggg gacggggatc
      541 aatgcggagc cggagtaccc ccgcctcatg gtcgcccacc tccgcgagat gaccgggctg
      601 cacctcgagg aggggaagga ccgcgtccag ctgatgcagt ccatgggcga cgtggccacc
      661 ttcagcggag cgctccgggc ctacgtgctg gacctccaga agatcgccaa cgacatccga
      721 ctgctcgcat cggggccgcg aaccgggctc gccgagatcg tgcttccggc ggtgcagccc
      781 gggtcgagca tcatgcccgg caaagtgaac ccgtcgatcg ccgagatggt gaaccaggtg
      841 tgctaccagg ccgtcggcct cgacctcacg gtggcgatgg cggccgaggc gggacagctg
      901 gagctgaacg tgatgatgcc ggtgatcacg cacaacatcg tgttcgcgat gatcatcgtg
      961 ggcaacgcga gccgcgtgct ggcggacaag tgcgtggccg gcatcgagcc ggacgaagcc
     1021 cagtgcgcct actggctcga gcgcagccca gcgctcgtca cggcgctcgc ccccgagatc
     1081 ggctacgcgg aggccgccaa actggccaag gaggcgctgg cgaccggtct cacggttcgc
     1141 gagctggtcc tcaagaagaa gctcctcgag ggggcgaagc gcgatgccgt actcgatctc
     1201 cgggccatga ccgagctggg cgtgccc
//
LOCUS       DATIFF010000899         7648 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2264819, whole genome shotgun sequence.
ACCESSION   DATIFF010000899 DATIFF010000000
VERSION     DATIFF010000899.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7648
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2264819"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..607
                     /locus_tag="VLD58_13155"
     CDS             <1..607
                     /locus_tag="VLD58_13155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HSB55303.1"
                     /translation="AAEAGVDDFLAQATPEAKLELIRKHQAGGRLVAMTGDGTNDAPA
                     LAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLLEIVETGKQMLITRGALTTFSIAND
                     VAKYFAIIPAAFATTYPVLKALNIMGLATPESAILSAVIFNALVIVFLVPLALRGVKY
                     RPIGAAKLLRNNLLVYGLGGILVPFAGIKLIDMMLVALHLV"
     gene            612..1193
                     /gene="kdpC"
                     /locus_tag="VLD58_13160"
     CDS             612..1193
                     /gene="kdpC"
                     /locus_tag="VLD58_13160"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpC"
                     /protein_id="HSB55304.1"
                     /translation="MRTLVRPAIMSLVALTLITGLVYPTAVTGIAALLFHHQAEGSLI
                     MRGDSAIGSELIGQSFTGPQYFWSRPSATGPVPYNGAASSGSNLGPTNPAQLEAVKGR
                     VEALKAADPGNTTPIPIDLVTASASGLDPHITPAAAEYQVSRVARARGLTEDSIRAVV
                     RRFTRARTLGILGEPTVVVLPLNLALDGRKPAP"
     gene            1198..3894
                     /locus_tag="VLD58_13165"
     CDS             1198..3894
                     /locus_tag="VLD58_13165"
                     /inference="COORDINATES: protein motif:HMM:NF014728.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase KdpD"
                     /protein_id="HSB55305.1"
                     /translation="MTEPRPSPEQLLARIREEEARAARGRLKIFFGANPGVGKTFAML
                     EEARAKRVEGMDVVVGLVETHGRAETAAQLQGLEQLPRLTLEHRGVTLTEFDLDAALA
                     RRPTLLLVDELAHTNAPGLRHERRWQDVEDLLAAGISVYTTLNVQHLESLNDVVAQIT
                     GVQVRETVPDSVFDGADDVELADLTPEDLLRRMQQGKVYLAEQAERAGEGFFRKGNLI
                     ALRELALRRVAERVDAQMRGYMRDHGIREVWPAGERVLVAVSDHAAAARLVRAGRRIA
                     STLKCDWIVLHVETPGTAGLSDAGRARLVETLQLAEEAGAETVTVPGRQVAEEILSYA
                     AAHNVTRILAGKPTGSSWRARLLGSTVDRLLRGSGDVDVYVITGDAGENEDRRRPVVA
                     PRVAPAREYRFALATVAVCTLVGWLVLRHLSTTDVSMIYLLGSMVVASRCGRGPSLLA
                     AGLSIAVFDFVFVPPYYTFAVSDFSYVLTFGTMLVVALLISGYTLRIREQAQLARDRE
                     HRTAALYALSRDLGQSRGREDVVVTARKHLGESFGSTAQVLAPGAGGELELLNPIATA
                     PVIDEKELSVADWAFRRGELAGSGTATLPGATALHLPLSGASGVVGVLALWSPDLGRF
                     QDPSERHLLETFAGQVGVALERVTLEEKTRQARLEVEAERLRTSLLSSLSHDLRTPLG
                     VITGAASSLRDNSSLTPEARLELLESIVEESQRMNRLIRNLLDMIRVETGSLQVQKEW
                     QPLEDAVGVSLIRLGERLQSHPVSVQLPPDLPLVPLDAVLLEQVFINLLENAAKYTPD
                     GSPIEISAVASPGVVTVSVADRGPGLPPGGEERVFEKFYRGEDAPPGKGVGLGLTIAR
                     GIVTAHGGRIWAETRPEGGAVFRFTLPLTGTAPPPIPVEEVA"
     gene            3911..4606
                     /locus_tag="VLD58_13170"
     CDS             3911..4606
                     /locus_tag="VLD58_13170"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB55306.1"
                     /translation="MPSPTVLLIEDEPQMRRFLRAALGNQPYELIEAPTAREGMAQAA
                     GRNPDLILLDLGLPDLDGLTVTREIRSWSRTPIIVISARGQEQDKVAALDAGADDYLT
                     KPFGVEELLARMRVALRHAALRVGGPAEPVFEAFGVKVDLARRQVFRSGVEVHLTPLE
                     YNLLQELIRHAGKVLTHRHLLREVWGVNAINHTHYLRVYITQLRHKLEQDPAQPKLLQ
                     TETGVGYRLRTDG"
     gene            complement(4582..5046)
                     /locus_tag="VLD58_13175"
     CDS             complement(4582..5046)
                     /locus_tag="VLD58_13175"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HSB55307.1"
                     /translation="MTSFVATSSVSIDAPRERIWRALTDRNDIRKYMFGTEATSEWTE
                     GSSISWRGEWKGKRYEDKGVVLKVIEPRLLAYSHFSPLSGLPDEPENYHVVNIELAGL
                     QPTWVTVTQDGNPTESARKHSEENWSQMLGSLKRYLEAENRISTPHPSVRSL"
     gene            complement(5159..7003)
                     /locus_tag="VLD58_13180"
     CDS             complement(5159..7003)
                     /locus_tag="VLD58_13180"
                     /EC_number="1.5.1.20"
                     /EC_number="2.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional homocysteine
                     S-methyltransferase/methylenetetrahydrofolate reductase"
                     /protein_id="HSB55308.1"
                     /translation="MNRLRELIADGRTHVFDGAMGTMLYARGVFLNVCYDELALRQPD
                     LIRDIHREYVKAGAELLETNTFGANPVKLATHGLAGDTEKINAAAARLAREAAEDRAA
                     VAGAIGPLGIRIEPYGETSHEEACAAFARQVDGLLQGGVDGFILETFSDVDEIRAAID
                     AVRSRTDLPIIAQMTVGIDGKTYYGTDPETFGPALQLMGADVVGVNCSVGPHGVLEVV
                     EHLARVVTVPISAQPNAGLPRDVGDRKIYMASPEYMAEYGRRIVEAGARFIGGCCGTT
                     PEHIKALTGFVKSVAPRHSASYAAMPSVVRMAEPVPFAERSNFAAKIARGEFVTSVEI
                     VPPKGVDPRPMFDQVRELKAAGVDAVNVPDGPRAQSRMGALLSGLLIQREVGLEPVVH
                     YACRDRNLLGMLSDLLGAAASGIRNLLIVTGDPPKMGPYPDATAVFDIDSIGLTNLVN
                     RLNRGLDPGGNALGGKTSFVLGVGVNPASPDPDRELRRFAWKVEAGAEFAMTQPVFDL
                     DQLDRFLDKTAHHKLPIIAGIWPLVSLRNAEFLANEVPGVTVPKIVLDRMRAASAKGK
                     EEGLAEGVRIAQEMVRAARTRVCGVQVAAPMGRANVALEVIRAAGTTR"
     gene            complement(7000..>7648)
                     /locus_tag="VLD58_13185"
     CDS             complement(7000..>7648)
                     /locus_tag="VLD58_13185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="vitamin B12 dependent-methionine synthase
                     activation domain-containing protein"
                     /protein_id="HSB55309.1"
                     /translation="LFKDDSRKDIAAIVHTLRQQSRRAAGRHNLALADFIAPVESGVP
                     DYLGLFAVTSGHGLEKLVAEFESQHDDYNAILAKALADRLAEAFAERLHERVRREYWG
                     YAPAESLDNDALIHEKYQGVRPAPGYPACPDHTEKETIFRLLDAETCAGIHLTESMAM
                     TPASSVSGYYFWRPESQYFGVGKLGKDQVEEYAERKDLPLAVVERWLAPNLAYTR"
BASE COUNT         1165 a         2625 c         2598 g         1260 t
ORIGIN      
        1 cgccgccgag gctggcgtcg atgacttcct ggcccaggcg acgccggaag ccaagctgga
       61 actgatccgg aagcatcagg ccggcggccg gctggtggcc atgaccggcg acgggaccaa
      121 cgatgccccg gcgctggccc aggccgacgt ggccgtggcg atgaactccg ggacccaggc
      181 ggccaaggag gccggcaaca tggtggacct ggactccaat cccaccaagc tgctggagat
      241 cgtcgagacc gggaagcaga tgctgatcac gcgcggggca ctcaccacgt tcagcatcgc
      301 caacgacgtg gccaagtact tcgccatcat tccggcggct ttcgctacca cctatccggt
      361 gctcaaggcg ctcaacatca tgggcctggc caccccggag agcgcgatcc tctccgccgt
      421 gatcttcaac gccctggtca tcgtcttcct ggtgcccctc gccctgcggg gcgtgaagta
      481 ccgtccgatc ggcgcggcga agctgctgcg caacaacctg ctggtctacg gcctgggcgg
      541 gatattggtg cccttcgccg gcatcaagct gatcgatatg atgctggtcg cccttcacct
      601 ggtctgagtg tatgcgcacc ctggtccgtc ctgcgatcat gtccctggtc gcgctcacgc
      661 tgatcaccgg cctggtctat cccaccgctg tcaccggcat tgcggccctg ctgttccacc
      721 accaggccga gggcagcctg atcatgcggg gtgattcggc catcggctcg gagctgatcg
      781 ggcagtcgtt caccgggcca cagtacttct ggtcccggcc ttcggccacc ggtccggtgc
      841 cgtacaatgg agccgcttcg agcgggtcga acctgggtcc caccaacccg gcccagcttg
      901 aggccgtgaa gggcagggtc gaagccctca aggccgccga tcccggcaac accacgccga
      961 tcccaatcga cctggtaacc gcctcggcga gcgggctcga tccccacatc acgccggctg
     1021 ccgcggagta ccaggtgtcc cgcgtggccc gcgcccgcgg tctcacggaa gattccatcc
     1081 gggcagtggt gcggcgcttc acccgggccc gtaccctggg gatcctggga gagccgacgg
     1141 tggtcgtcct tccgctcaac cttgcgctcg atggtcggaa gccggcacca tagtggcatg
     1201 accgagccgc gccccagtcc cgagcagctg ctcgcccgta ttcgcgagga ggaggctcgc
     1261 gcggcccggg gccggctcaa gatcttcttc ggcgccaatc ccggcgtcgg caagaccttc
     1321 gccatgctgg aagaggcccg cgccaagcgg gtcgaaggca tggacgtcgt ggtgggcctg
     1381 gtagagactc acggccgggc cgagacggcg gcgcagctcc agggcctgga acagctcccc
     1441 cgccttaccc tggagcaccg gggagtaacc ctcaccgaat tcgatctcga cgcggcgcta
     1501 gcccgccggc ccaccctgct tttggtggat gagctggccc acaccaacgc gcccggcttg
     1561 cgccacgagc gccgctggca ggacgtcgaa gacctcctcg ccgccggcat ctcggtctac
     1621 accaccctca acgtccagca cctcgagagc ctgaacgacg tcgtcgccca gatcaccggc
     1681 gtccaggtcc gggagaccgt gccggactcg gtcttcgatg gcgccgacga cgtggagctg
     1741 gcggacctca cccccgagga cctgttgcgc cggatgcagc agggcaaggt ctatctcgcc
     1801 gagcaggcgg aacgggccgg agaagggttc ttccgaaaag gcaatctcat cgccctgcgc
     1861 gagctggccc tgcgccgggt ggccgagcgg gtcgatgccc agatgcgcgg ctacatgcgc
     1921 gatcacggga tccgggaggt gtggcccgcg ggcgaacggg tgctggtggc ggtgagcgat
     1981 catgccgcgg cggcccggct ggtgcgggcc ggccgccgca tcgcctccac cctcaagtgc
     2041 gactggatcg tcctccacgt ggagactcct ggtaccgccg gcctcagcga cgcgggccgg
     2101 gcgcgactgg tggaaacgct ccagctggcg gaggaggccg gcgccgagac cgtgacggtt
     2161 cccggccggc aggtggcgga ggagatcctg tcgtacgctg ccgcccacaa cgtcacccgg
     2221 atcctggctg ggaagccgac cggcagctcc tggcgggctc ggctgctggg gtccacggtc
     2281 gaccggctgc tgcgcggcag cggcgacgtg gacgtgtatg tgatcaccgg tgacgccggc
     2341 gagaacgaag accgccgccg gccggtggtt gcccctcgtg tcgctccggc acgcgagtac
     2401 cggttcgccc tggctacggt ggcggtctgc accctggtgg gctggctggt cctccggcac
     2461 ctcagcacca ccgatgtgtc catgatctac ctgctcggct cgatggtggt ggcgtcgcgc
     2521 tgcggccggg gcccgtcgct gctggcggcg ggactgagca tcgccgtctt cgatttcgtg
     2581 tttgtcccac cctactacac cttcgcggtt tccgacttca gctacgtgct gacgttcggc
     2641 acgatgctgg tggttgccct cctgatcagc ggatacaccc tgcgcatccg ggagcaggcg
     2701 cagctggcgc gggaccgcga gcaccgcacc gccgcgctct acgccttgag ccgcgacctg
     2761 ggtcagagcc gcgggcggga ggatgtggtg gtcacggccc ggaaacacct gggtgaaagc
     2821 ttcggcagca cggcacaggt attggccccg ggggccggcg gagaactcga gctgctcaat
     2881 cccattgcga cggccccggt cattgacgag aaggagctga gtgtggccga ctgggcattt
     2941 cgccggggcg agctggcggg atcggggaca gccaccctcc ccggggccac cgcactgcac
     3001 ctgccgttga gcggcgccag cggggtcgtc ggggtcctgg cgctctggtc gccagacctc
     3061 gggcgcttcc aggacccgtc cgagcgccac ctgctggaga ccttcgcggg acaggtcggc
     3121 gttgccctcg agcgggtgac gctcgaagag aagacccgtc aggcccgcct cgaggtggag
     3181 gccgagcggc tcaggacgtc gctgctgagc tcgctgtcgc acgatctgcg cacccctctc
     3241 ggcgtaatca ccggggcggc cagcagtctg cgggacaaca gctcgctcac cccggaagcc
     3301 cggctcgagc tgctcgagtc gatcgtggaa gagtcccagc ggatgaaccg gctgatccgc
     3361 aacctgctcg atatgatccg ggtcgagacc ggctcgttgc aggtccagaa ggagtggcag
     3421 ccgctggagg acgcggtcgg agtgtcgctg atccggctgg gagaacggct tcagtcgcac
     3481 ccggtgtcgg tgcagctccc accggatctc ccgctggtgc cgctggacgc cgtgctgctg
     3541 gagcaggtgt tcatcaacct gctggagaac gccgccaagt acactccgga cgggtcgccg
     3601 atcgaaatct ctgcggtggc atcacccggg gtggtgacgg tctcggtcgc cgaccggggc
     3661 cccggactgc cgccgggcgg ggaggagcgg gtgttcgaga agttctaccg gggtgaggat
     3721 gcgccacccg gcaaaggggt gggcctcggt ctcacgatcg cacgagggat cgtgaccgcg
     3781 catggtggcc gcatctgggc cgagactcgt ccggagggtg gggcggtgtt ccggttcacc
     3841 ctgcccctca ccggcactgc tcctccacca atcccggtcg aggaggtcgc ctgattaccc
     3901 ttgagcctcg atgccctcgc ccaccgtcct gctgattgaa gacgaacccc agatgcgccg
     3961 gttcctccgg gccgcactgg ggaatcagcc ctacgaactg atcgaagcgc cgacggccag
     4021 ggaagggatg gcgcaggccg ccggccgcaa ccccgacctg atcctgctcg atctcggcct
     4081 gccggacctc gacggcctca ccgtcacccg ggagatccgg agttggtcgc gcacgcccat
     4141 catagtcatc tccgccaggg ggcaggaaca ggacaaggtc gccgcgctcg atgccggcgc
     4201 ggacgactac ctcaccaagc cgttcggcgt ggaggaactc ctcgcccgaa tgcgagtagc
     4261 gctgcgccac gccgccctga gggtgggcgg cccggccgag ccggtattcg aggcgttcgg
     4321 ggtgaaggtg gatctggcca ggcggcaggt gttccggagc ggggtagagg tgcatctcac
     4381 gccgctcgag tacaacctcc tgcaggagct gatccgtcac gcggggaagg tgctgaccca
     4441 ccgccacctc ctcagggagg tctggggagt caatgcgatc aaccacaccc actatctgcg
     4501 ggtctacatc acccagctcc ggcacaaact cgagcaggat cccgcccagc cgaagctgct
     4561 tcagaccgaa accggtgtcg gctacaggct ccgtaccgat gggtgagggg tactgatccg
     4621 gttctcagcc tcgaggtagc gcttgaggct ccccagcatc tggctccagt tctcttccga
     4681 gtgcttccgg gcgctttcgg tcgggttgcc gtcctgggtg acggtgaccc aggtgggctg
     4741 gagaccggcg agctcgatgt tcaccacgtg gtagttctct ggctcgtccg gaagcccgct
     4801 gagcgggctg aagtggctgt acgccagcaa tctcggttcg atgaccttga gcaccacgcc
     4861 cttgtcctcg tagcgctttc ccttccactc gcccctccag ctgatactgc tgccctcggt
     4921 ccactcggag gtggcctcgg ttccaaacat gtacttccgg atatcgttcc ggtcggtcag
     4981 cgcgcgccag atccgctccc gcggcgcgtc gatggagacc gaactggtgg ctacaaacga
     5041 agtcatggcg cgagtccctt gagtcagaga ggcacactga cacgaggaca atgtatagtc
     5101 gggtcaggta acgggagtgt cgatagtggc tcgcccccaa gggggtactc cgggatcctc
     5161 accgggtagt ccccgccgcc cggatcacct cgagtgccac attggcccgc cccatcgggg
     5221 ccgcgacctg gacaccgcac actctggtcc gcgccgcccg caccatttcc tgcgcgatcc
     5281 gcaccccctc ggccagcccc tcctccttgc ccttggccga ggccgcgcgc atccggtcga
     5341 gcacgatttt cggaaccgtt acacccggca cttcgttggc gaggaactcg gcattccgga
     5401 gagacaccag cggccagatt cccgcgataa tcgggagctt gtggtgggcg gtcttgtcca
     5461 ggaaacgatc cagctgatcg agatcgaaca ccggctgggt catcgcgaac tcggccccgg
     5521 cctccacctt ccaggcaaaa cggcggagtt cccggtccgg gtcgggcgat gccggattga
     5581 cgccgacgcc cagcacgaag ctggtcttgc cgccgagcgc gttgccgccg gggtcgaggc
     5641 cgcggttgag ccgattcacc aggttggtga gaccgatgct gtcgatgtcg aacacggcgg
     5701 tggcatcggg atagggcccc atcttgggcg ggtcgcccgt gacgatcagc aggttgcgga
     5761 tcccgctcgc ggccgcgccg agcaggtcgg acagcatgcc gagcaggttc cggtcgcggc
     5821 aggcatagtg caccaccggc tcgagcccga cctcgcgctg gatcagaagc ccggagagga
     5881 gcgctcccat ccggctctgg gcccggggac catcgggcac gttgaccgca tcgacgcccg
     5941 ccgccttgag ctcgcgcacc tggtcgaaca tcgggcgagg gtcgacgccc ttgggcggga
     6001 cgatttcgac cgaggtgacg aactcgcccc gggcgatctt ggccgcgaag ttcgaccgct
     6061 cggcgaacgg caccggctcg gccatcctca ccaccgaggg catcgcggcg tagctcgcgc
     6121 tgtggcgcgg ggctacgctc ttcacgaatc cggtcagcgc cttgatgtgc tccggtgtgg
     6181 tgccgcagca tccgccgatg aagcgggcgc ccgcctcgac gatccggcgg ccgtactccg
     6241 ccatgtactc cgggctcgcc atgtagatct tgcggtcgcc cacatcgcgc gggaggccgg
     6301 cgttgggctg ggccgagatc ggcacggtga ccacccgcgc caggtgctcg accacctcca
     6361 gcacgccgtg ggggccaacc gagcaattca cgcccaccac gtcggcgccc atcagctgga
     6421 gcgcgggccc gaaggtctcc gggtcggtgc cgtagtaggt cttcccgtcg atgcccaccg
     6481 tcatctgcgc gatgatcggg aggtcggtcc ggctccgcac cgcgtcgatc gcggcgcgga
     6541 tctcgtcgac atcgctgaag gtctcgagga tgaacccgtc gactccgccc tgcagcagtc
     6601 catccacctg gcgggcgaag gcagcgcagg cctcctcgtg cgaggtctcg ccgtacggtt
     6661 cgatccggat gcccagcggg ccgatggcgc cggccaccgc ggcgcggtct tccgccgcct
     6721 cgcgggccag gcgggccgcc gcggcgttga tcttctcggt gtctcccgcc aggccgtggg
     6781 tggcgagctt caccgggttg gcgccgaagg tgttggtctc cagcagctcc gctcccgcct
     6841 tcacgtactc gcggtggatg tcgcgaatga ggtcgggctg cctgagcgcc agctcgtcgt
     6901 agcagacgtt gaggaagacg ccgcgggcat agagcatcgt gcccatggcg ccgtcgaata
     6961 cgtgggtgcg cccgtcggcg atgagctccc ggagccggtt catcgcgtgt acgccagatt
     7021 gggagcgagc caccgttcca cgacggccaa cgggagatcc tttcgttccg cgtactcttc
     7081 cacctggtcc ttcccgagct tgcccacgcc gaagtactgg ctctccggcc gccagaagta
     7141 gtagccgctc accgacgacg ccggcgtcat cgccatgctc tcggtgaggt ggatcccggc
     7201 gcaggtctcg gcgtcgagca gccggaagat ggtctctttc tcggtatggt cggggcaggc
     7261 ggggtagcct ggcgccggtc ggacgccctg gtacttctcg tgaatcaggg cgtcgttgtc
     7321 gagcgattcc gcgggggcgt agccccagta ctcccgccgc acccgctcgt gcagccgttc
     7381 ggcgaatgcc tccgcgagcc ggtcggcgag cgccttggca aggatcgcgt tgtagtcgtc
     7441 gtgctgcgac tcgaactcgg cgaccagctt ctccaggccg tgaccggacg tcaccgcgaa
     7501 gagaccgagg tagtcgggca ccccgctctc gaccggggcg atgaagtcgg ccagggcgag
     7561 gttgtgccgc ccggcggccc gccggctctg ctgccggagg gtgtgtacga tggcggcgat
     7621 gtccttccgg ctgtcatcct tgaagagc
//
LOCUS       DATIFF010000900         1368 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_878930, whole genome shotgun sequence.
ACCESSION   DATIFF010000900 DATIFF010000000
VERSION     DATIFF010000900.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1368
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_878930"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..285
                     /locus_tag="VLD58_13190"
     CDS             <1..285
                     /locus_tag="VLD58_13190"
                     /inference="COORDINATES: protein motif:HMM:NF012579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HSB55310.1"
                     /translation="GIGHGIAIPHAKVATVQQLWLVCGSHPGVDFDALDGAPVRLFFL
                     LVGPESAAGQHVKALSRIARLVRREEVREALMRAASPEEFNQLLVEAEER"
     gene            282..>1368
                     /gene="aspS"
                     /locus_tag="VLD58_13195"
     CDS             282..>1368
                     /gene="aspS"
                     /locus_tag="VLD58_13195"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: protein motif:HMM:NF001750.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HSB55311.1"
                     /translation="MTVATAMRSHRCGSLRREHAGLSVRLGGWVHRVRDLGGVIFIDL
                     RDRDGLVQLSFDPKTTSREVIALAGTLGQETVILVEGKVELRPESARDSALASREVEV
                     KVASLKVVGPAVTPSIPVARKEGEELPAEELRLKYRILDLRRPELQQNLQMRHRLLQR
                     ARQVLTDLDFLEIETPILTKPTPEGARDYLVPSRVHPGEFYALPQSPQIYKQLLMVAG
                     YDRYFQIARCFRDEDLRADRQPEFTQIDIEASFVAAADVEGYIERILVALWDEAGQLA
                     EVPFPRLPWREAMERFGIDKPDLRYGFEIQDLTGMLKADAADFVRTALAGGGRLRGIV
                     APGGGSASRKELDQLAAVAKSAKAGGLI"
BASE COUNT          213 a          449 c          491 g          215 t
ORIGIN      
        1 ggcatcgggc acgggatcgc cataccccat gccaaggtcg ccacggtgca gcagctctgg
       61 ctggtgtgtg gcagtcatcc cggtgtcgac ttcgatgcgc tcgacggggc gccggtgcgg
      121 ctcttctttc tgctggtcgg ccctgagagc gcggccggcc agcacgtcaa ggcgctgtcc
      181 cgcatcgccc ggctggtgcg ccgggaagag gtgcgcgagg ccctgatgcg ggcggcgtcg
      241 cccgaggaat tcaaccagtt gctcgtcgag gccgaagaac gatgaccgtc gcaaccgcga
      301 tgcgcagtca ccgctgcggg agtctccgcc gggaacatgc cgggctgtcc gtccgcctgg
      361 gcggatgggt gcaccgggtg cgggacctgg ggggtgtgat cttcatcgac ctgcgcgacc
      421 gcgacggcct ggtgcagctc tcgttcgatc ccaagaccac ctcgcgcgag gtgatcgcgc
      481 tggcggggac gctgggccag gagaccgtca tcctggtcga ggggaaggtt gagctgcgtc
      541 ccgagtcggc ccgggactcg gcgctcgcgt cccgcgaggt cgaggtgaag gtggcgagcc
      601 tcaaggtggt gggcccggcc gtgacgccga gcattcccgt ggcccgcaag gaaggggagg
      661 aactgcctgc ggaggagctc cgcctcaagt accggatcct ggacctccgc cggccggagc
      721 tgcagcagaa tctccagatg cggcaccggc tgcttcagcg ggcacgccag gtgctgaccg
      781 acctcgactt cctcgagatc gagaccccga tcctcaccaa gcccactcct gaaggggccc
      841 gcgactacct ggtgccgagc cgggtgcatc cgggggaatt ctacgcgctg ccccaatcgc
      901 cccagatcta caagcagctg ctgatggtgg cggggtacga ccgctacttc cagatcgcgc
      961 gctgcttccg ggacgaggat ctccgcgccg accggcagcc ggagttcacc cagatcgaca
     1021 tcgaggcatc attcgttgcc gcggcggatg tcgagggcta catcgaacgg atcctggtgg
     1081 cgctctggga tgaggccggt caactcgcag aggtgccctt cccgcggctt ccctggcgcg
     1141 aagcgatgga gcggttcggc atcgacaagc cggacctccg ctatggcttc gagatccagg
     1201 atctgaccgg catgctcaag gctgacgccg ccgacttcgt tcggacggcc ctcgccggag
     1261 gaggccgact ccgcggcatc gtggcgccgg gtggcggaag cgccagccgc aaggagctcg
     1321 atcagctcgc ggcggtcgcc aagagcgcca aggcgggggg gttgatct
//
LOCUS       DATIFF010000901         1390 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1189206, whole genome shotgun sequence.
ACCESSION   DATIFF010000901 DATIFF010000000
VERSION     DATIFF010000901.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1390
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1189206"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            116..976
                     /gene="accD"
                     /locus_tag="VLD58_13200"
     CDS             116..976
                     /gene="accD"
                     /locus_tag="VLD58_13200"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HSB55312.1"
                     /translation="MAWFKKERKPRISQRTKLEIPKDAWERCESCGHVDIRERFERAL
                     NVCPECGHHRRFTAEEYIELLTDSGTWRELFGNLRSQDPLHFENYAERLVTAEKKAGG
                     ADAIYTGFGRLDGLAYHLGVMNFGFMGGSMGSVVGEKIARLARRSAEKRVPLVIVCTS
                     GGARMQEGVFSLMQMAKTSAAIAQLYQLSVPYISILTNPTTGGVSASFAMQGDVILAE
                     PGAVIGFAGQRVIKQTIGQDLPEGFQTAEFLLEKGQIDDVVPRASLRETTARLLRHMR
                     GQRLVEESAE"
     gene            complement(1032..>1390)
                     /locus_tag="VLD58_13205"
     CDS             complement(1032..>1390)
                     /locus_tag="VLD58_13205"
                     /inference="COORDINATES: protein motif:HMM:NF015639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HSB55313.1"
                     /translation="ATRLNRKGCKCPFYTGAEGGCRVYPDRPLICHLFPIDIIEHEED
                     ETYWWVLFGACEEVAKGKLQGRVEEARALAREIDRRMPDALRRSFMSDADAAVFEPVF
                     YDHPIHYLLPLTPPAE"
BASE COUNT          224 a          456 c          481 g          229 t
ORIGIN      
        1 cgggcttgca ttccgggtcg cctgggagtc gcgaaagagc ggctatgccg agatctgaca
       61 acgagttagc tgtcaaggcc tagcggcatg cgaaggattg cgccagattg ccgcaatggc
      121 atggttcaag aaggagcgca agccgcggat cagccagcgg accaaactcg agattcccaa
      181 ggacgcctgg gaacgctgcg agtcgtgcgg tcacgtggac atccgcgagc gcttcgagcg
      241 ggccttgaac gtctgccccg aatgcggcca tcaccggcgc ttcacggccg aggagtacat
      301 cgagctcctc accgacagcg gcacgtggcg tgagctcttc ggcaacctcc ggtcgcagga
      361 tccccttcac ttcgagaatt acgccgagcg cctcgtcacc gccgaaaaga aggcgggggg
      421 cgccgacgcc atttacaccg gcttcggccg gctggacggg ctggcgtatc accttggcgt
      481 gatgaacttc gggttcatgg gcggatcgat ggggtcggtg gtgggcgaga agatcgcccg
      541 gctggcccgc cgctcggccg agaagcgcgt tccgctggtc attgtctgca cctccggcgg
      601 cgcccggatg caggagggtg tcttctccct catgcagatg gccaagacct ccgccgcgat
      661 cgcccagctc taccagctct cggtcccgta catctccatt ctcaccaacc ccaccaccgg
      721 cggcgtctcc gcctcgttcg cgatgcaggg cgacgtgatc ctggccgagc cgggcgcggt
      781 gatcgggttc gcggggcagc gcgtcatcaa gcagaccatc gggcaggatt tgccggaggg
      841 cttccagacc gcggagttcc tgctcgagaa ggggcagatc gacgacgtcg tcccgcgggc
      901 ctcgctgcgg gagaccaccg cccggctcct tcggcacatg cgcgggcagc ggctggtgga
      961 ggagtcggcg gagtagtgcc gcccccgggt cgtgtccagc tatccgcccc gccgaagtcg
     1021 gcggggcttc gtcattctgc cggcggggtc agcggcagca ggtagtggat cgggtggtcg
     1081 tagaagaccg gctcgaagac cgcggcgtcg gcgtcggaca tgaatgagcg cctgagtgcg
     1141 tccggcatgc ggcggtcgat ctcgcgggcg agcgcgcggg cctcctcgac ccggccctgg
     1201 agcttcccct tcgccacctc ctcgcaggca ccgaacagga cccaccagta ggtctcgtcc
     1261 tcctcgtgtt caatgatgtc gatcgggaag aggtggcaga tcagcggccg gtcggggtac
     1321 acgcggcagc cgccctccgc accggtgtag aaggggcact tgcacccctt gcggttcagc
     1381 cgggtcgccg
//
LOCUS       DATIFF010000902         1770 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_266552, whole genome shotgun sequence.
ACCESSION   DATIFF010000902 DATIFF010000000
VERSION     DATIFF010000902.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_266552"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1138
                     /locus_tag="VLD58_13210"
     CDS             <1..1138
                     /locus_tag="VLD58_13210"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HSB55314.1"
                     /translation="PRLAPLLTLVIAPMAAAQTGVPAPGGTLLGVVQDSATGRPLGLA
                     LLTVQGREARVFASESGRFSLSGLPAGEVTIRVSQIGFRAATLRLVLDTRANAPAGAP
                     LVVRLARQAFRLPEIVVVGDACPTVEHLEESGESGTILDEAFTNAERLLALERDYPYS
                     GAFQRLTTLLDETQSRVGGWVDTVRYDSRRLRGYRKGEVVEMSRRADRSDVANYFTTS
                     DIAREEFRRNHCFWFAGRDSLSGFQAFRIDFAPRTSVKTADWAGSLLIDSATMVLLRS
                     ESHLVNLPTRSTFASAVCRVLYRQLAPTLAHEFQAQCVSTVRRNPPIVVERWLLVDFS
                     FLGRTPVGTDTTGAAHPPPGSPFPPGTPSSVMARKSRTSSSSRP"
     gene            complement(1048..>1770)
                     /locus_tag="VLD58_13215"
     CDS             complement(1048..>1770)
                     /locus_tag="VLD58_13215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HSB55315.1"
                     /translation="GLNAEAAYPAKMVAHLRAITGLDLREAQDRIQLMQSMGDVATMS
                     GAVRAFVLDLNKIANDVRLLASGPRTGFAEILLPAVQPGSSIMPGKVNPSIAEMVNQV
                     CFQVLGLDTTVAMAAEAGQLQLNVMMPVITHNMVFGLMILAAAVRVFDERCVRGIEAD
                     AAQCAHWLERSPALVTALAPKIGYAESARLAKEAIATGLTVRELVVKKQLLQGRELEE
                     VLDLRAMTELGVPGGKGLPGGG"
BASE COUNT          256 a          642 c          602 g          270 t
ORIGIN      
        1 tccgcgactc gctcccctgc tcacactggt gatcgccccg atggccgccg cccagacggg
       61 ggtgccggca ccgggcggca ccctcctggg agtggtgcag gacagcgcga ccggccggcc
      121 gctgggcctc gcgttgctga ccgtgcaggg gcgcgaggcg cgcgtcttcg cgtcggaatc
      181 gggacgcttc agcctttccg gacttcccgc cggcgaggtc accattcgcg tcagccagat
      241 cggcttccgc gcagccacgc tccgactggt gctcgacacc cgcgcgaacg ctccggccgg
      301 ggcgccgctc gtcgtgcggc tggcccggca ggccttccgg cttcccgaga tcgtcgtggt
      361 gggggacgcc tgccccacgg tggagcacct ggaagagagc ggcgagagcg gcacgatcct
      421 cgacgaggcc ttcaccaacg ccgagcggct cctggccctc gagcgggact acccgtacag
      481 cggggcgttc cagcgcctga ccacgctgct cgacgaaacc cagtcgcggg tcggcggctg
      541 ggtggacacg gtcagatacg acagccggcg gctccggggg taccggaagg gcgaggtggt
      601 ggaaatgtcg cggcgggcgg accgctccga cgtcgccaac tacttcacca cctcggacat
      661 cgcgcgggag gaattccgcc gcaaccactg cttctggttc gccgggcgcg acagcctgag
      721 cggattccag gcgttccgga tcgacttcgc gccgcggacc tcggtgaaga cggcggactg
      781 ggcgggctcg ctgctgatcg actcggcgac gatggtgctg ctccggtcgg aatcccacct
      841 ggtcaacctg ccgacgcgca gcaccttcgc ctcggcggtc tgccgggtgc tttaccggca
      901 gctggcgccg accctcgccc acgaattcca ggcccagtgc gtttccaccg tgcggcgcaa
      961 cccgccgatc gtggtcgagc ggtggctgct ggtggacttc agctttctgg gccggacgcc
     1021 cgtgggaacc gacaccacgg gagccgctca ccccccgccg ggcagtccct tccctcccgg
     1081 aaccccgagc tccgtcatgg cccgcaaatc gaggacctcc tcgagctccc ggccctgaag
     1141 cagctgcttc ttcaccacca gctccctgac cgtcaacccc gtcgcgatcg cctccttcgc
     1201 gagccgggcc gattcggcgt agccgatctt cggcgcgagc gcggtgacca gcgcggggct
     1261 ccgctcgagc cagtgcgcgc actgggccgc gtcggcctcg atgcccctca cgcagcgctc
     1321 gtcgaagacc cggaccgccg cggccaggat catcaacccg aacaccatgt tgtgggtgat
     1381 caccggcatc atcacgttga gctgaagctg gccggcctcc gccgccatcg ccaccgtggt
     1441 gtcgaggcca agcacctgga agcagacctg gttcaccatt tcggcgatcg agggattcac
     1501 cttgccgggc atgatgctcg agccgggctg gaccgcgggg aggaggatct ccgcgaaccc
     1561 ggtgcggggg ccggaggcga gcaaccgcac gtcgttggcg atcttgttga ggtcgagcac
     1621 gaacgcgcgg acggccccgc tcatcgtggc gacgtcaccc atggactgca tgagctggat
     1681 gcgatcctgg gcctcccgga gatcgaggcc ggtgatggcg cgcaggtggg ccaccatctt
     1741 cgccgggtac gccgcctcgg cattcagccc
//
LOCUS       DATIFF010000903         1037 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1649114, whole genome shotgun sequence.
ACCESSION   DATIFF010000903 DATIFF010000000
VERSION     DATIFF010000903.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1649114"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..221
                     /locus_tag="VLD58_13220"
     CDS             <1..221
                     /locus_tag="VLD58_13220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55316.1"
                     /translation="QPDRGHQEYQERESSIAEPAQPAGGHESIQPAVTDRTMIRVTVL
                     AAETRVRYMIGPGSSSRHRSRDMSAEIN"
     gene            221..880
                     /locus_tag="VLD58_13225"
     CDS             221..880
                     /locus_tag="VLD58_13225"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HSB55317.1"
                     /translation="MWRARRAVILAVLVALALSLLLSSPVHARMLVLFTQAEGVIRQH
                     PVLGIGVFVLLAIVSAMLMFVSSVVLIPVAIYVWGPLVCALLLWVGWFLGGMLSYAIG
                     RYLGRPVVDRMVRPETLARYEAYARKASAFVPIVLLQLAIPSDTAGYLFGMVRVPLRL
                     YLVALALAEIPYAIGAVYLGTSFLERRIVPLLLLGAAGIGLSLLAYRSVHRGEAGARA
                     G"
BASE COUNT          133 a          354 c          359 g          191 t
ORIGIN      
        1 agcaacccga ccgcggccac caggagtacc aggagcgcga gagcagcatt gcggagccgg
       61 cgcaaccagc gggtgggcat gagtcaattc agcccgccgt gaccgatcgc accatgatcc
      121 gcgtcacggt ccttgccgcc gagacccgag ttcggtatat gatcgggccg ggttcgtcgt
      181 cacgccatcg gagccgcgac atgagcgctg agatcaattg atgtggcggg cgcggcgggc
      241 ggtcatcctc gcggtgctgg tggcgctcgc cctgagcctc ctgctcagct ccccggtgca
      301 cgcccggatg ctcgtcctgt tcacccaggc ggaaggggtg atccggcagc acccggtcct
      361 cggcatcggc gtcttcgtcc tgctggccat cgtctcggcg atgctgatgt tcgtctccag
      421 cgtggtgctg atcccggtgg caatctacgt ctggggcccg ctggtctgcg ctctcctcct
      481 ctgggttggc tggtttctcg gcgggatgct gtcctacgcc atcggccgct acctgggccg
      541 cccggtggtg gatcggatgg tccgccccga gaccctggcc cgctacgagg cgtacgcgcg
      601 aaaagcgtcg gcattcgtcc cgatcgtgct gctccaactg gcgatcccct ccgatacggc
      661 cggctacctg ttcgggatgg tgcgagtacc gctccggctc tacctggttg ccctggcgct
      721 ggcggagatt ccctatgcca tcggggcggt gtacctgggc accagtttcc tggagcgccg
      781 gatcgtgccc ctgctgctgc tcggcgcggc ggggatcgga ctgagcctgc tggcatatcg
      841 gtcggtgcac cggggagaag cgggggcgcg ggccggctga tcccgccgct ccggtgaccc
      901 ggggcacaga agcccgtcgt ccggcaggcc actgtgcacc atgcatcgac cggcggtggg
      961 actcgcggcg ttcctcgtac tcgcctgttc ggaccgatcc gagcgccagg tggcgatgga
     1021 tccggccccg ccctcga
//
LOCUS       DATIFF010000904         1649 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_418431, whole genome shotgun sequence.
ACCESSION   DATIFF010000904 DATIFF010000000
VERSION     DATIFF010000904.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_418431"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(6..1583)
                     /locus_tag="VLD58_13230"
     CDS             complement(6..1583)
                     /locus_tag="VLD58_13230"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HSB55318.1"
                     /translation="MRIQSPLAPTTLRSGVWLSLVIPALLQAQTSAPLKSAAGTITPA
                     DIKQRIFVIADDSMMGRDTPSPGLEKTAQYVADQFKKFGLKPGGENGTWFQRYTISRR
                     RIDPAQSHVGFMIHGKHVHAELARDARFSFGTVPSKEIMAPVVLLGGAYSAEDVRKLE
                     VRGKIVLVVIDYSKPLPSSTLSVLQGLAAGGAAGVVTLSNRDSATFARMVGGTPPTRS
                     GVDGLNDGIPPVVEVHQRILGDILSEAGIRPDEIRASGTLITRAIPDLTIGIGLKDEV
                     LSSATAPNTIGILEGSDPKLKNEYLVFSAHMDHVGVAGPNGTGGCSARGADSICNGAD
                     DDGSGTVGVVELAEAFSRPGARPKRSVIFMTVSGEEKGLYGSSYFTSNPTIPISQMVA
                     DLNIDMIGRNWPDTIVAIGKEHSDLGQTLNRIAGEHKNLNMAPIDDRWPEENFYYRSD
                     HFNFARNGVPILFFFNGVHPDYHQVSDSPDKIDTDKMSRILQLLFYLGQDVANNPARP
                     KWNPESYEKIVQKKPAA"
BASE COUNT          256 a          516 c          567 g          310 t
ORIGIN      
        1 ctttcctacg ccgccggctt cttctgtacg atcttctcgt agctctccgg gttccatttc
       61 ggccgggccg ggttattggc cacgtcctgc ccgagataga agagcagctg gaggatccgg
      121 ctcatcttgt cggtgtcgat cttgtcgggg ctgtcgctca cctggtgata gtccgggtgc
      181 accccgttga agaagaacag gatcgggacg ccgttcctgg cgaagttgaa gtggtcggag
      241 cggtaataga agttctcctc cggccagcgg tcgtcgatcg gggccatgtt gaggttcttg
      301 tgttcgcccg cgatgcggtt gagggtctgg ccgaggtcgc tgtgctcctt gccgatcgcc
      361 acgatggtgt cgggccagtt gcggccgatc atgtcgatgt tgaggtcggc caccatctgg
      421 ctgatcggaa tggtcgggtt ggaggtgaag tagctgctgc cgtagagccc cttctcctcg
      481 ccgctcaccg tcatgaagat caccgaccgc ttgggccggg cccccggccg gctgaacgcc
      541 tccgccagct ccaccacgcc caccgtgccc gagccgtcgt catccgcccc gttgcagatg
      601 ctgtcggccc cgcgggcgct gcagcctccg gtgccgttcg gccccgccac gcccacgtgg
      661 tccatgtgag ccgagaagac caggtactcg ttcttgagct tgggatcgga cccctcgagg
      721 atgccgatcg tattcggcgc agtagcgctg ctcagcacct cgtccttgag cccgatgccg
      781 atggtgagat cgggaatcgc gcgggtgatg agcgtgcccg acgcccggat ctcgtccggg
      841 cggataccgg cctcgctcag gatgtcaccc agtatccgct ggtgcacctc gaccaccggc
      901 gggatcccgt cattgagccc gtccacccct gaacgggtcg gcggcgtgcc gccgaccatg
      961 cgggcgaagg tcgccgagtc acgattgctg agggtgacga cgccggcggc gccaccggcc
     1021 gcgaggccct ggagcaccga gagggtggac gaagggagcg gtttgctgta gtcgatcacc
     1081 accagcacga tcttgccgcg cacttcgagc ttccgcacgt cctcggccga gtaggcgcca
     1141 cccaggagca ccaccggcgc catgatctcc ttcgacggca cggtgccgaa gctgaagcgc
     1201 gcgtcgcggg cgagctcggc gtgtacatgc ttcccgtgaa tcatgaagcc gacgtgcgac
     1261 tgggcggggt cgatccggcg gcgcgagatg gtgtagcgct ggaaccaggt gccgttctcg
     1321 ccgccgggct tgagcccgaa cttcttgaac tgatcggcca cgtattgcgc ggtcttctcg
     1381 aggccgggac tgggcgtgtc gcggcccatc atggagtcgt cggcgatgac gaagatccgc
     1441 tgcttgatgt cggcgggcgt gatggtgccg gccgccgact tgagcggggc cgaggtctgc
     1501 gcctgcagca gcgcgggtat gacgagcgat agccagacac ccgaacggag agtagtgggt
     1561 gcgagtggcg actgaatacg catcgaaggt ccgtgtgagg agatgtaaag gttatccggc
     1621 gccggaaaag ataagcgccc ggccgcatg
//
LOCUS       DATIFF010000905         1294 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2112144, whole genome shotgun sequence.
ACCESSION   DATIFF010000905 DATIFF010000000
VERSION     DATIFF010000905.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1294
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2112144"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..886
                     /locus_tag="VLD58_13235"
     CDS             <1..886
                     /locus_tag="VLD58_13235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55319.1"
                     /translation="ILDTARGDVYVWGQRKRLDDESRRGGRGPLRALELISRDFLLAR
                     PDRAKRLVVSCPKGKFPLGGGMIATPSLSADGEGVYPHSYERLGVQRGYHITALGIDP
                     HPRRTTKREATIQVVCGLGLVPNSSPHRTVFVRRHQTNAAVSRCPTGQYLFSGGFQRT
                     NFTTPRRTFGGNYITESRAISPTAWQVRAGAVGHDGGELTAIAYCARSPAPLITEVSA
                     SVPLPGWQSATATTPQCPPGLRLTAGGFSFNGSRDAFFAAGWINPDDTWSATGFGYFG
                     PAPALTAYGYCLAVSDAV"
     gene            1003..>1294
                     /locus_tag="VLD58_13240"
     CDS             1003..>1294
                     /locus_tag="VLD58_13240"
                     /inference="COORDINATES: protein motif:HMM:NF014998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004144 - diacylglycerol O-acyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0045017 - glycerolipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="wax ester/triacylglycerol synthase
                     domain-containing protein"
                     /protein_id="HSB55320.1"
                     /translation="MSAHRMSNADAAWLHMDRPTNLMVVNALMWFEEPVDFDRAREIY
                     RLRMVDHFPPFRQRIAEPRLGIGAPTWVDDPHFDLDLHLHRRALPAPGDQAAL"
BASE COUNT          203 a          482 c          417 g          192 t
ORIGIN      
        1 catccttgac accgccaggg gagacgtcta cgtgtggggg caacgcaaac gcctcgatga
       61 tgagtcccgg cgcggcggcc gcggccccct cagggcgctg gagctcatca gcagggactt
      121 cttgctcgcc cgccccgacc gggccaagcg gctcgtggtt agctgcccga aggggaagtt
      181 cccgctcggg ggcggcatga tcgccacccc atcgctaagc gccgacggcg agggcgtcta
      241 cccgcactcc tacgagcgcc tcggagtcca gcgcggctac cacatcactg cactcggcat
      301 cgaccctcac ccccggcgca cgaccaagcg cgaggcgacg atccaggtcg tctgcggcct
      361 ggggctggtc ccgaacagct ccccgcacag gaccgtcttc gtcaggcggc atcagaccaa
      421 cgccgcggtc tcccgctgcc cgaccgggca gtacctgttc tccggagggt tccagcgaac
      481 caacttcacc acccccagga ggaccttcgg cggcaactac atcaccgagt cacgggcgat
      541 ctccccgacc gcctggcagg tgagggcagg cgccgtcggc catgacggag gggagctcac
      601 ggcgatcgcc tactgcgcaa ggagcccggc cccgctgatc accgaggtct ctgcctccgt
      661 gccgctgcca ggctggcagt ccgcgactgc gacgaccccg cagtgcccgc ccggcctccg
      721 cctgaccgct ggggggttca gcttcaacgg atcgcgcgat gcgttcttcg ccgccggctg
      781 gatcaacccc gacgacacct ggtcggccac gggcttcggc tacttcggcc cggctcccgc
      841 cctgaccgcc tacggttatt gcctggcggt cagcgacgcg gtctgaccac ccgcgattca
      901 tccctcctcg tccatgtcgc acaggctgcg gtacgtgagc gagcgctcag cggaagcggc
      961 gtccggcgtg gacggcgtac gatcgctgca aggaaggaca cgatgagcgc acaccgcatg
     1021 agtaacgccg acgcggcgtg gttgcacatg gaccggccga ccaacctgat ggtggtcaac
     1081 gcgctgatgt ggtttgagga accggtcgat ttcgaccgtg cgcgcgagat ctaccgcctg
     1141 cgcatggtgg accatttccc gcccttccgc cagcgcatcg ccgagccgag gctggggatc
     1201 ggcgccccga cctgggtgga cgacccgcac ttcgaccttg acctgcacct gcatcgccgg
     1261 gcgctcccgg caccggggga ccaggccgcg ctcc
//
LOCUS       DATIFF010000906        18411 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_111872, whole genome shotgun sequence.
ACCESSION   DATIFF010000906 DATIFF010000000
VERSION     DATIFF010000906.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 18411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18411
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111872"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2413
                     /locus_tag="VLD58_13245"
     CDS             <1..2413
                     /locus_tag="VLD58_13245"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55321.1"
                     /translation="EQAMGERALDARTDVYALGAMTYEMLVGDPPFTGSTAQAIVAKV
                     LTEEPAGIVQRRRTVPPAVEAAVLTALQKLPADRWASAKEFADALDGTGTPHYMSPEQ
                     AMGDRELTPRSDVYALGAMTYEMLLGEPPFTGPTAQSIVAKVMTEKPAPPSARRDRIA
                     PAVEDVVLTALEKLPADRFATAAEFGAALLGTGTEARPARTTATAARAGRPSIRSTAL
                     YAALGLAVLLAAWGWLRPTPATVTSRQRVMLWRRSFGSVLSPGVSRIATQAAIAPDGS
                     SIVFSDPTSENALLMHKARNEAEARPISGTEGGVSPFFSPDGRWIGFIAGTRLRKAPV
                     EGGPPITIASDVNPIYPTAAWLDDGTIVYVSINSEFRRVSSDGGAGTPVGKKDEHATD
                     NSGLVAPLPGSRGVLFTSCPGNCSVSSSVFVFDFAADSARLLVPDAAGAWYAPTGHLL
                     YTDRGGSLFAARFDPKSLKLGSGAIPVIEDVLPGSFTMSASGSALYAVATGGALTSEL
                     VWVSRDGRAVPVDSSWRKDFQYPALSPDGKSVAVSVRDETIQIWIRRADGTRQKLTDS
                     GSVNWRPAWTSDGRSIVFLSNRSGAGQGGYDAYQVPVDGSAAPALLEDWAYGLWEAER
                     SSDGQWLVFRADEAGNIGRIRGRRLSGDTTVVPLVVGKALVNNVALSPDGHWLAYMSD
                     ATGRREVYVTPFPAATSTHLVSRDGGSEPRWGRSGRELFFKSGNYLMAVPITSSTAFV
                     AGTPVPLFSVAGFRSARNRQQYDVAPDGQHFIMIREPENDRPENLVYAENWLAELEAK
                     VKARR"
     gene            2410..3321
                     /locus_tag="VLD58_13250"
     CDS             2410..3321
                     /locus_tag="VLD58_13250"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55322.1"
                     /translation="MNGMPPVFLDEPAVKRLLSYRELIPAISRALADLSAGHVVQPVR
                     SIIPVAQHQGFFGVMPAYAGALGAKLVTFYPGNQGIPTHHAMILLFRPETGEPIAVMD
                     GRLITEMRTAAASAAASQVLARPDAGVLALLGSGVQAESHLEALRQVRPIREVRVWSP
                     RNAKAFAERHAVRLAATVEEAVRGADLVVVATSSRQPVLRGSWITPGAHVNAVGATRP
                     DWRELHDDLVTTARLFVDSREAAVRESGDVIAAGKPPVEIGEVINGTQPGRQNAVEVT
                     LFKSVGVGVEDVVSADLVYRAHLASSR"
     gene            3318..5633
                     /locus_tag="VLD58_13255"
     CDS             3318..5633
                     /locus_tag="VLD58_13255"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB55323.1"
                     /translation="MTASHEPARPVDRIAAALADRYRIERELGQGGMATVYLAHDLKH
                     DRAVAIKILRGDVSALLGAERFLAEIRTTARLRHPNILPLFDSGRVDGTSDLLYYVMP
                     FVEGESLRDRLDREKQLPIPDALRITHEVASALEYAHRQGVVHRDIKPENILLEGGHA
                     LLADFGIAKATAPDANLRLTETGSRIGTPLYMSPEQSAGESDLDGRSDLYSLASVLYE
                     MLAGRPPFIGATAEAVLVQRFTQVPPRVTEQRPEVPAPVDAAIRRALARDPEERPQSI
                     ERFAALLEAPPAQATEARSIAVLPFENMSADPENAYFGDGIAEEVINALTRVQGLRVA
                     ARTSAFSFRGKREDLRVIGDKLNVATVLEGSVRKSGNRLRITAQLISVHDGYHLWSER
                     YDRELTDIFVIQDEIAAAIAGKLQLTFAPPTVEAVKATSAEVQAYELIVRGRALSNQR
                     GRAILTAIACFEQAVALAPNSSAAHTGLGQAYRVKAQYGLGSTAECLPRAITSLRRAL
                     ELDPGNAEAIGHYGTLSATVDADSTSAIGYWERALAMDPRLSEIRALYAGWGLAIMGE
                     GREDARALSEIRRALSDDPLNPICSTISTIMLSTLGRLDEAVTEARRGIALDPTAFAP
                     RYALVWALTWSRRGSEALAAAEEVMETFGRHPWLLHVLPGIYRQLGDERRAQATYDEL
                     MARAVTAPVTHWSRSVAACYMGKLDEALEHALTSARNRDSIGPIWFRWPDIERLQAHP
                     RYGEVLAALSSRPVIEGLEDPATYDALWGRT"
     gene            5618..6598
                     /locus_tag="VLD58_13260"
     CDS             5618..6598
                     /locus_tag="VLD58_13260"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HSB55324.1"
                     /translation="MGAHMMLDPVRPVSLPEIREARERIAGTVVRTPLIRLPLGPDAP
                     DIRLKLENLQPINAYKLRGAANAVAMLSESERRQGVWTISAGNAGQGVAWAARSAGIP
                     CTVVVIETAPTAKLERMRALGATLVPVPHEVAWTALETRTHPGVSGTFIHPFDEHNFI
                     AGHGTMGLEILEDAPDTAAVIASIGGGGLLTGIGSALKAIKPDIKLWGAEPETAAPMT
                     RSLAMGSPQEFPDWKPTFVDGAGGRSVFPRMWERMRPLIDGTIVVTLEETRQAMRLMA
                     EKARVISEGAGALPLAAALTGKAGRGPIVAVVSGGNIDLAKFADLIGATA"
     gene            6645..8480
                     /locus_tag="VLD58_13265"
     CDS             6645..8480
                     /locus_tag="VLD58_13265"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HSB55325.1"
                     /translation="MTHLRWMTACALLAMPLPHHPGQSADTFPRVVPNENRVSGGQLR
                     GDTLEIHLEVRMATWRPEADSGPAIEVAALAEEGHEPQIPGPLIRVPSGTIIAATVAN
                     RLGDSTIAVHGLVSHPAERDDSLVLHPGESTRVSFAAGVPGTYLYHAVLGNRTRPTEE
                     RETLTGAFVVDPVTGSPPDRIMVINIWGTPVDSTTYRNALAINGRSWPWTERIDATMG
                     DSIRWRVINGSIRPHPMHLHGFFFRVDGLGDGIRDKTLPLPARPMAVTQTLLPFETTA
                     MTWVPDRPGHWLFHCHIGFHVTPDARFESPVPGNHDRMAHDPRVHMAGLIIGIVIHPA
                     DQSAVSSRHARRLHLFIQEGPRQGRAARGLGYVLQRGVRPPASDSIGSGSSPLVLTRG
                     EPTDIVVQNRLREPAAIHWHGIELESYSDGVPGWSGSGSQLAPSIAPGDSFVARLTLP
                     RAGTFIYHTHMNDIEQLTSGLYGGLVVLEPGRRFDARRDHLFVAGWDGDAEPLHLLVN
                     GDSLPAPLDLSAGVPHRIRLVNIGAAGQLPFSIYRDTSLVTWTALARDGADLPPVQRT
                     AGRSSALVDVGETRDFTFLPQPGEYRLVVGDLAHPLWSQHLKVRP"
     gene            8675..10855
                     /locus_tag="VLD58_13270"
     CDS             8675..10855
                     /locus_tag="VLD58_13270"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HSB55326.1"
                     /translation="MGGTEILATALGDRYRIERPLGAGGMATVYLATDLKHDRQVALT
                     ASSTEERMIRSPRWFLYAWAMLLSAPLGAQQPFTLEHARKLVGVGGVELSPDGRTAVV
                     SVSRPNYQTDRSEAELYAVDVASGSSRQLTFARRTVGLPRFAPDGKTLAFLSPDSSGE
                     GQIWLMPMSGGEPRRLTTHPTGVEHFAWRPDGRAIAYAAADEAPRRDGEAKHLTTFEV
                     GAQDLFLRENIQPQHIWVIDLDSTTGRRVTSGSWSLEFVLPPSSPPSALSWSPDGSEI
                     AFVAVVAPESGKLDSVHVQVVNVATGAIRSLNDARRFQNNPVFSPDGSMVAYWWPREG
                     RGDLVWENEVWVAPANGGPGRSLTRAIDRNLFGAQWMPDGKSLLVAGNDRAGVGAWIQ
                     PLDGAARRLDLGDLVVNGAFGYDITVAAKSPVIAFTATSPDRPSELYVMDTPAAKPRR
                     LTDFNGWARDVAWGSMERITWKSDALEPDGVVVYPPGFQRSRQYPLVLLIHGGPQAAS
                     KLQFSALAQLMAAEGWVVFQPNYRGSDNLGNTHMAAIIGDAGAGPGRDVMSGVALLRK
                     RPYIDPKHTAVTGWSYGGYMTSWLIGNYPDEWQAAMAGAPVTSWEDQYNFGDGSVTVR
                     YLFGGSPWTGGRIQAYREQSPITYATKIKTPTLVMSNMEDFRVPPTQAFQLYRAMKDN
                     GVETEFIGFKGRTHASSDPVNSRERARLWVDWLKRHLGQTAATP"
     gene            11275..14238
                     /locus_tag="VLD58_13275"
     CDS             11275..14238
                     /locus_tag="VLD58_13275"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB55327.1"
                     /translation="MPFHFFHPNIAGGSLSPWTGTDLGIVSRRVHAITRGLGWTLAIL
                     GIAGTTGWLLAHGKLAQPAAGFPPDSLIEPVAIFIIGLGLVSAAAGRARGPALAGAAI
                     ICFGVAALIRQIFHVGPEALLRDPGAAPGTLVPLSVPVSSALLFLTAGVGLIGLALPM
                     RLDRSRLAAGTFGAILAVLSLGLIAVRLMWRPDAQGSLLVGSSVLLLAASLLLGSCLG
                     LITWSSDPDTASTPWVPLTLGVACLATSLFLWRALVAYEQDQIRELTRVASHTARLQI
                     EQQVNAATKVLSRIARFSPRSRVKENSAVALTRDVDGLRGIVWLDSAYHVIQVRPQTI
                     DSAELRMDLERLLPGEMDTIASESQPVHYFTLSRPNGVAIALPYCGEARCSGYQVGIF
                     DSERLLEPALADSGSGFIHAVAQQRRTIVSPPGRVLLPVEWTQHSRYAIGNIQWDLVT
                     WPSDQTLNRLRSGLPDLLLLLGLLVSTLLPLAIRLGQMNLTRARLAERVRVNLALETA
                     TDGIWEWDVTTGNARRSAALWRHLGYNPGAMSTGADPWSSLIHPNDQTRVMNALSDHL
                     SGLTQTFEARYRIRGHAGDWHWVIDRGRVVERSPTGQPRRVLGISADVTDRQRADEAL
                     AASERRFRASFDSAAQVLLLLDADGRVLEANHAALDFTKLDLPALRGLPLWELPCWRD
                     GAEAAGEVRADVLEALEGAPVRRELELVDAKGEVLLLELLISPIHDAGGQVFQLLADG
                     RDITVRRRAEDVLREVESLTTMGRMAARVAHEINNPLAGIQNAFLLIKDAVPADHPHR
                     AYVGAVEREIARIAGVTRQLYETYRPEQNGAHGTSVTGLVSDAVALLEQINRGTGVKI
                     DVNLTGVPGTVRLPEAILRQALYNLVQNAVEASPPGGVVEVVATVDAGVFILRVRDRG
                     PGIPAEIRERVFEPFFTTKSATVRTGGMGLGLSLVGRSVQALGGHVEIHDRDGGGTEF
                     VVRLPIPPVTPKVFA"
     gene            14235..14966
                     /locus_tag="VLD58_13280"
     CDS             14235..14966
                     /locus_tag="VLD58_13280"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB55328.1"
                     /translation="MSQGRILLADDEPTFLNSTADLLRREGYVCDTVSDGVSALAKVE
                     ANPYDLLITDLEMPGNSDLGLVRAIAASRGGLPVLVITGVPSVRSAMACVELPVAAYL
                     LKPVVFGDLLPRVETAVSRFRSWQAMQQAEQRLTEWRRDYEHVANGAGAPGTGIDVFL
                     SLTLRNVMGSLTDLQQLGRALSGKPVEEHPCQLLNCPRGAQLQEAVRETIRVLEETKH
                     AFKSKALGELRHKLELMLELDGIRP"
     gene            15200..15829
                     /locus_tag="VLD58_13285"
     CDS             15200..15829
                     /locus_tag="VLD58_13285"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HSB55329.1"
                     /translation="MSQHTTLRLTFAVLIVAGAGPAHAFAQSSSTTVGVYGGLYSPLG
                     SDPRLSTVGTQVDRNNSFVGGARLNYWGPGVLGLELEGGLTPAKVDVAGAPINRSRNQ
                     DILTVALRLMAGVSPAVSPLGFHLGVGPAFIRRNSDAFQQSGSLSRFGIVAGGGFRFP
                     IASRLHLRFDAEDYIYGGKLGSDSKTWNDLVLSAGLGVQLGGRTSGYDR"
     gene            15840..16049
                     /locus_tag="VLD58_13290"
     CDS             15840..16049
                     /locus_tag="VLD58_13290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HSB55330.1"
                     /translation="MNWHEIQGRWTEMRGRVRERWGKLTDDDLDVVAGKRDQLIGVLQ
                     QRYGQTVDQIEEQVNEFERRVFARL"
     gene            16093..16605
                     /locus_tag="VLD58_13295"
     CDS             16093..16605
                     /locus_tag="VLD58_13295"
                     /inference="COORDINATES: protein motif:HMM:NF017758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF892 family protein"
                     /protein_id="HSB55331.1"
                     /translation="MSLDSMRDLLVRELRDLYSAGTMVLKALPALASAVTTRPLRELL
                     VDHSHEAETQLDRLESIFASLGSDPWGLRCRGMEGLVEESVVLLTEHGDQTVREAAIA
                     AEALRIGHFLLAGYQSACRHARNLWLDPLVEPLTVTLAEIQSITAQLTTLAEQMTPTQ
                     ALAEASGREA"
     gene            complement(16857..18191)
                     /locus_tag="VLD58_13300"
     CDS             complement(16857..18191)
                     /locus_tag="VLD58_13300"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSB55332.1"
                     /translation="MPNKPNRRDFVSTMAAGVGLFHIVPRHVLGRGYRAPSDTLNVAC
                     IGVGGMGRNDVRGMEGENLVAFADVDWNAADDAFRTYPKARRYKDYRELLDREAKNID
                     AVTVSTPDHNHAAAAMLALKAGKHVYCQKPLARTLGEVRSLMQEAARRPKQCTQMGNQ
                     GHTFEGCRVIREWVEAGVIGPVREVHYWTNRPIWAQGIDRPTALHVPPPTLDWNLWLG
                     PAPERPYNPAYAPFSWRGWWDFGTGALGDMACHGMDAAFWGLDLRYPTRIIPETTKQY
                     TETAPKSSRIEYRFPARNGRGEVKVVWRDGGLWPPRPEGLPDGTNWPPEEIGGQMWVG
                     DTGAILAGMYGENPRLLDAKRDAELKANPVPQKYERSPGVYAEWIRAMKGGAPNLSTF
                     AGHAGPLTEMVLLGCVAVRLGQPIDVDPEKGSIAQTVPDEWLKPVYRKGWTL"
BASE COUNT         2864 a         6404 c         6241 g         2902 t
ORIGIN      
        1 cgagcaggcc atgggcgagc gcgccctcga cgcacgcacc gacgtctacg ccctcggcgc
       61 catgacgtac gagatgctcg tcggcgaccc gccgttcacg ggcagcaccg cgcaggccat
      121 cgtcgcgaag gtgctcaccg aggagccggc cgggatcgtg cagcggcgac gcaccgtgcc
      181 gccggcggtg gaggccgcgg tgctcaccgc gctgcagaag ctgccggccg accgctgggc
      241 gagcgcgaag gagttcgccg acgccctcga cggcaccggc acgccgcact acatgagccc
      301 cgagcaggcg atgggcgacc gcgagcttac tccacgcagc gatgtctacg cgctgggcgc
      361 gatgacctac gagatgctgc tgggcgagcc gccgttcacc ggcccgaccg cgcagtcgat
      421 cgtcgccaag gtgatgaccg agaagcccgc tccgccgagc gcccggcgcg accggattgc
      481 gccggcggtc gaggacgtgg tgctgaccgc gctggagaag ctgccggccg accgctttgc
      541 cacggcggcg gagttcggcg cggcgctgct cggaaccggc accgaggcgc ggccagcccg
      601 cacgacggct accgcggcac gggccggccg gccgtcgatc cgttccacgg cgctgtacgc
      661 agccctggga ctcgcggtgc tcctcgccgc gtggggctgg cttcgcccca cgcccgccac
      721 cgtaaccagc cgccagcgcg tgatgctctg gcggcgctcc ttcggatcgg tgctctcgcc
      781 cggggtctcc cgcatcgcga cccaggccgc gatcgcgccg gatggctcca gcatcgtctt
      841 cagcgatccg acgagcgaga acgcgctgct gatgcacaag gcccggaacg aagccgaggc
      901 ccggccgatt tcgggaaccg agggcggagt ctcgcctttc ttctcccctg atggccgctg
      961 gatcggcttc atcgcaggta cccggctcag gaaggcgccg gtggaggggg gaccgccgat
     1021 cacgatcgcc agcgacgtga acccgatcta cccgaccgcc gcgtggctcg acgatggaac
     1081 catcgtctat gtcagcatca actcggagtt ccgccgggtg tccagcgacg gaggagccgg
     1141 cacgccggtc gggaagaagg acgaacatgc gaccgacaat tccggcctgg tggcgccgct
     1201 gccggggagc cggggcgtgc tgttcaccag ctgccccggg aactgctcgg tctcctcgtc
     1261 ggtgttcgtg ttcgacttcg ccgccgacag cgcccggctg ctcgtccctg acgccgccgg
     1321 cgcctggtat gccccgaccg ggcacctgct ctacaccgac cggggcggat cgttgttcgc
     1381 cgcccgcttc gacccgaaga gcctcaagct gggctccggc gccatcccgg taatcgagga
     1441 cgtgctgccg gggagcttca ccatgtccgc ctccggcagc gcgctctacg ccgttgccac
     1501 tggaggcgcc ctcacctccg agctggtctg ggtttcgcga gacgggcggg cggtcccggt
     1561 cgattcgagc tggcgcaagg actttcagta cccggccctg tcgcccgacg ggaagtcggt
     1621 ggccgtgagc gtacgggacg agaccatcca gatctggatc cggcgcgccg atggcacccg
     1681 gcagaagctg accgacagcg ggtcggtgaa ctggcggccg gcctggacgt ccgacggccg
     1741 ctccatcgtc ttcctgtcga accgctccgg cgccgggcag ggtggatacg acgcctacca
     1801 ggtgccggtg gacgggagcg ccgctccggc tctgctggaa gactgggcct acggtctctg
     1861 ggaggcagag cgttcgtccg acgggcagtg gctcgtattc cgggccgacg aggccggcaa
     1921 catcggacgg atccgtggcc ggcggctcag cggcgacacg acggtggtcc ccctggtcgt
     1981 gggcaaggcg ctggtcaaca acgtcgcgct ctctcccgat ggacactggc tggcatacat
     2041 gtcggatgcg accgggcgga gagaggtcta cgtgactccc ttcccggcgg cgacctcgac
     2101 ccatctggtg tcgagggacg gcggcagcga accgcgctgg ggccgcagtg gccgggaact
     2161 cttcttcaag tcgggcaact acctgatggc ggtgccgatc acctccagca ccgccttcgt
     2221 ggccggcacc cccgtcccgc tcttctccgt cgccgggttt cgctcggcgc ggaatcggca
     2281 gcagtacgac gtggcccccg acggccagca cttcatcatg atccgggaac ccgagaacga
     2341 ccggcccgag aatctcgtct acgccgaaaa ctggttggca gaactcgagg cgaaggtgaa
     2401 ggcacggcga tgaacggcat gccgccggta ttcctggacg agccggcggt gaaacgcctg
     2461 ctttcctacc gggaactgat ccccgccatc tcccgcgccc tggccgatct ctcggcgggt
     2521 cacgtggtcc agccagtgcg gagcatcatt ccggtggcgc agcatcaggg cttcttcggc
     2581 gtcatgccgg cctacgccgg cgcactcggc gccaagctgg tcacgttcta tcccggcaat
     2641 cagggcatcc cgacccatca cgcgatgatc ctgctcttcc ggcccgagac cggcgagccg
     2701 atcgcggtca tggatggccg gctcatcacg gaaatgcgga cggcggccgc cagcgcggca
     2761 gcgagtcagg tgctcgcgcg tcccgatgct ggcgtgctcg cgctgcttgg ctcgggtgtg
     2821 caggccgaga gtcatctgga ggcgctccgt caggtgcgcc cgattcggga agtgcgggtg
     2881 tggagtcccc ggaacgcaaa ggcgtttgcc gaacgacacg ccgtgcgcct ggcggcgacg
     2941 gtggaagaag cggtgcgcgg agccgatctc gtggtggtcg ccaccagctc ccgccagccg
     3001 gtgcttcgcg gaagctggat cacccccggg gcacacgtga acgccgtcgg cgccacccgg
     3061 cccgactggc gcgagctgca tgacgacctg gtcaccaccg cccggctgtt cgtcgattcc
     3121 cgcgaggcgg cagtgcggga atccggcgat gtgatcgcgg cggggaagcc gccggtcgag
     3181 atcggcgaag tgatcaacgg cacccagccc ggccggcaga acgccgtcga ggtcaccctg
     3241 ttcaagtcgg tcggcgtcgg ggtggaagac gtcgtgtccg ccgatctggt gtaccgggcg
     3301 cacctggcgt cctcgcgatg acggcctcgc acgagccggc ccggccggtc gaccgcatcg
     3361 ctgccgccct tgccgatcgc taccgcatcg agcgggaact gggccagggc ggcatggcca
     3421 cggtctacct cgcccatgac ctcaagcacg accgtgcggt ggccatcaag atcctgcggg
     3481 gtgacgtctc cgccctgctc ggcgccgagc gcttcctggc cgagatccgc accaccgcga
     3541 ggctccggca tccgaacatc ctgccgctgt tcgacagcgg ccgggtggac gggaccagcg
     3601 acctgctcta ctacgtcatg ccgtttgtcg agggagaatc gctgcgcgat cggctcgacc
     3661 gtgagaagca gctgcccatc cccgatgcgc tccgcatcac ccacgaggtc gcgagcgccc
     3721 tcgagtatgc ccaccggcag ggtgtggtgc accgcgacat caagccagag aacatcctgc
     3781 tggaaggtgg acacgccctc ctggccgact tcggcatcgc aaaggcgacg gccccggatg
     3841 ccaacctgcg gctcaccgag accggctcgc ggatcggcac gccgctctac atgagcccgg
     3901 agcagtcggc cggcgaatcc gatctggacg gccggagcga tctctacagc ctggcctcgg
     3961 tgctctacga gatgctcgcg ggccggccac cgttcatcgg ggccaccgcc gaggcggtgc
     4021 tggtgcagcg gttcacccaa gtgccgccga gagtgacgga gcagcgaccg gaggtgccgg
     4081 ccccggtgga tgccgccatc aggcgggcgc ttgcccgcga ccccgaggag cggccccaga
     4141 gcatcgagcg gttcgccgcg ctgctggagg cgccgccggc gcaggccacc gaggcccggt
     4201 cgatcgccgt gctgccgttc gagaacatga gcgccgatcc ggagaatgcg tacttcggcg
     4261 atgggattgc ggaggaggtc atcaacgcgc tcacccgggt gcagggactg cgggttgcgg
     4321 cccgcacctc ggccttctcg ttccggggca agcgggaaga cctccgggtc atcggcgaca
     4381 agctcaatgt cgccaccgtg ctggagggaa gtgtccggaa gtcgggaaac cggctccgca
     4441 tcactgccca gctcatctcg gtccatgatg gctatcatct ctggtcggaa cggtatgatc
     4501 gggagctgac cgacatcttc gtcatccagg acgagatcgc ggccgcaatt gctggcaagc
     4561 tccagctcac cttcgcgccc cccacagtcg aggcggtgaa ggccacctcg gcggaggtgc
     4621 aggcctacga gctcatcgtg cggggccggg cgctctcgaa ccagcggggc cgcgcgatcc
     4681 tcaccgccat cgcctgtttc gaacaggccg ttgccctggc ccccaactcc tcggcggcgc
     4741 acacaggcct gggccaggcg taccgggtga aggcccagta tggactgggc tccaccgcgg
     4801 agtgcctgcc ccgtgcgatc acgtcgcttc gccgcgccct cgagctcgat cccggcaacg
     4861 ccgaagccat cggccactac gggaccctga gcgcgacggt cgatgccgac agcaccagcg
     4921 ccatcggata ctgggagcgg gccctggcca tggatccgcg gctctccgag atccgggcgc
     4981 tgtatgccgg ctggggtctc gccatcatgg gcgaggggcg ggaggatgcc cgggcgttga
     5041 gcgagatccg ccgggccctg agtgacgatc cgctcaaccc gatctgctcc accatcagca
     5101 ccatcatgct gagcacgctg ggccggctcg acgaggcggt gaccgaggcg cgccgcggga
     5161 ttgcgctgga tccgacggcc ttcgccccac gctacgcgct ggtctgggcc ctcacctggt
     5221 ccaggcgggg gagcgaggcc ctcgccgcgg cggaggaggt gatggagacc ttcggccggc
     5281 atccatggct gctgcatgtg ctgccgggga tctatcgtca gctgggtgac gagcggcgcg
     5341 cgcaggcaac ctacgacgag ctgatggcgc gggcggtgac cgcgccggtg acccactgga
     5401 gccggtcggt ggcggcgtgc tatatgggga agctggacga ggcgctggag cacgccctca
     5461 cctcggcccg gaatcgggac tccatcgggc cgatctggtt ccgctggccc gacatcgagc
     5521 gcctgcaggc ccatccacgc tacggcgagg tcctggcggc gctcagcagc cgcccggtca
     5581 tcgaaggact ggaagacccg gcaacctacg acgcgctgtg ggggcgcaca tgatgctcga
     5641 tccggttcgc ccggtctcgc tcccggagat ccgcgaggcg cgcgagcgga tcgccggcac
     5701 cgttgtccgc acccccctga ttcgcctgcc gcttggacca gacgctcccg atatccggct
     5761 caagctggag aatctccagc cgatcaacgc ctacaagctg cgcggcgcgg cgaatgcggt
     5821 tgccatgctc tcggagtcgg agcggcggca gggtgtctgg accatcagcg ccgggaacgc
     5881 gggacagggc gtggcctggg ccgcccgctc ggcgggcatt ccctgcaccg tggtagtgat
     5941 cgagacggcg cccaccgcca agctcgagcg gatgcgggcg ctcggcgcca cgctcgtccc
     6001 cgttccccac gaagtggcgt ggaccgcgct cgagacccgc acccatcccg gcgtgagcgg
     6061 gacgttcatc cacccgtttg atgagcacaa cttcatcgcg ggacatggga cgatgggcct
     6121 cgaaatcctg gaagacgcgc ccgatacggc cgcggtgatc gccagtatcg gcggtggcgg
     6181 gttgctcacg gggatcggca gcgctcttaa ggctatcaag ccagacatca agctgtgggg
     6241 tgcggagccg gaaacggcgg cgcccatgac tcgctcgctc gccatgggat ctccccagga
     6301 gttccccgat tggaagccga cgttcgtcga cggagcgggc gggcggagcg tgttcccgcg
     6361 gatgtgggag cggatgcggc cgctcatcga tggcacgatc gtcgtcaccc tcgaagagac
     6421 gcggcaggcc atgcgcctca tggcggagaa ggcgcgggtg atcagcgaag gcgcaggagc
     6481 tctgccgctc gccgcagcgc tgaccgggaa ggccggccgg gggccgatcg tggccgtcgt
     6541 gagcggcggg aatatcgatc tggcgaagtt cgccgacctc atcggggcca ccgcgtgatg
     6601 gcgaccctgt cgcacctcac ctccgacccg ggacctccgc gccgatgacc cacctccgat
     6661 ggatgaccgc atgtgcgttg ctggccatgc cccttccgca tcacccggga cagtccgccg
     6721 acacctttcc acgggtcgtg ccgaacgaga accgggtctc cggcgggcag cttcgcggcg
     6781 acaccctcga aatccatctc gaggttcgga tggccacctg gcgccccgag gcggacagcg
     6841 ggccggccat cgaggttgcg gcgctggcgg aggaaggcca cgagccccag atcccggggc
     6901 cgctcatccg ggtgccgagc gggaccatca tcgccgcaac ggtcgcgaac cggctgggcg
     6961 actccaccat cgccgtgcac ggcctggtat cccaccccgc ggagcgggac gacagcctgg
     7021 tgctgcatcc gggcgagtcg acccgggtct ccttcgccgc cggcgtgcct ggcacctacc
     7081 tgtatcacgc tgtcctggga aatcgcacga gacccacgga ggagcgtgaa acgctcacgg
     7141 gagcgttcgt ggtggacccc gtgacaggat caccgccgga ccggatcatg gtgatcaaca
     7201 tctggggaac cccggtcgac tcgaccacct accggaacgc gctggccatc aacggccgct
     7261 cgtggccctg gaccgagcgg atcgacgcca cgatgggaga cagcatccgc tggcgggtga
     7321 tcaacggctc gatccgtcct cacccgatgc acctgcacgg gttcttcttc cgggtggacg
     7381 gactgggtga cggcatccgg gacaagacgc tcccgcttcc ggcgcggccg atggccgtca
     7441 cccagacgct gctgcccttc gagaccacgg cgatgacctg ggtccccgac cggccgggcc
     7501 actggctctt ccattgccac atcggcttcc acgtcacgcc ggatgcccgc ttcgagtcac
     7561 cggtgcccgg aaatcatgat cggatggccc acgaccctcg ggtccacatg gcaggcctga
     7621 tcatcgggat cgtgatacat ccggcggatc agtccgcggt gtcgtcgcgc cacgcccgcc
     7681 ggctgcacct gttcatccag gaggggccgc ggcaaggccg agccgcgcgc ggcctcgggt
     7741 acgttctcca gcgaggcgtg cggccacccg cctccgattc gatcggcagc ggcagttcgc
     7801 cgctggtgct cacccggggc gagcccaccg acatcgtggt gcagaatcga ctgcgcgaac
     7861 cggcggcgat acactggcat gggatcgagc tggagagcta ctcggacggg gtgccgggat
     7921 ggagcgggag cggcagccag ctcgcgcctt cgatcgcccc gggtgattcc ttcgtggcgc
     7981 gcctgaccct gccccgggcc gggaccttca tttaccacac ccacatgaac gatatcgagc
     8041 agctcacctc cggcctctat ggcgggctgg tggtgctgga gccgggccgc cggttcgacg
     8101 cccggcgtga ccacctgttc gtggccgggt gggacggcga tgccgagccg ctgcatctgc
     8161 tggtgaatgg cgactcgctg ccggcgcctc tggatctctc cgccggagta ccccaccgca
     8221 ttcgcctggt gaacatcggc gcggccggcc agcttccgtt ctccatctac cgcgacacct
     8281 cgctggtgac ctggacggcg ctggccaggg atggcgccga ccttccgccg gtccagcgga
     8341 ccgccggacg ctcgtcggca ctggtcgatg tgggagagac ccgggatttc accttcctgc
     8401 cccagccggg cgagtaccgg ctggtcgtgg gcgatctcgc ccaccccctc tggtcccagc
     8461 atctgaaggt ccggccatga gccgcgccgg ataatcgagc cactctctgg cggaccccga
     8521 ccgcaagtcg tgaccgagag ttgcattgca ggcatcgcca acgccgactg cagtcccccg
     8581 gttcaccgcg gaccactcgt gccgcggcgc tgcagcattc atgaatccaa gggacgccgc
     8641 acagcgcgga gcggccggcg aacaaggaga gacgatgggc ggcaccgaaa tcctcgccac
     8701 cgcactcggc gatcgctatc gcatcgaacg gccgctcggc gcgggaggga tggccaccgt
     8761 ctacctcgcc accgacctca agcatgaccg ccaggtggcc ctcactgcct cttccacgga
     8821 ggaacgcatg atccggtcac cacggtggtt cctctacgcc tgggccatgc tgctgtccgc
     8881 accgctcggc gcccagcagc cgttcacgct cgagcacgcc cgcaagctgg tcggagtggg
     8941 cggtgtggag ttgagccccg acggacgcac cgcggtggtg agcgtcagcc ggcccaacta
     9001 ccagaccgac cggagcgagg ccgagctgta cgcggtggac gtcgcgagcg ggagcagcag
     9061 gcagctcacc ttcgcgcgcc ggacggtggg cctgccgcgc ttcgcccccg acgggaagac
     9121 gctcgcgttt ctctcacccg acagctccgg tgagggccag atctggctca tgccgatgag
     9181 cgggggcgag ccccggcggc tcaccactca tcccaccggc gtggagcact tcgcgtggcg
     9241 gcccgatgga cgggccatcg cctacgcggc ggccgacgaa gcccccaggc gcgacggcga
     9301 ggcgaagcac ctcaccacct tcgaggtcgg ggcccaggac ctcttcctgc gggagaacat
     9361 ccagccgcag cacatctggg tcatcgacct cgacagtacc accggccggc gggtgaccag
     9421 cgggagctgg tcactcgagt tcgtacttcc gccttcaagt ccgccgtcgg ccctgagctg
     9481 gtcgcccgat ggcagtgaga tcgccttcgt cgcggtggtg gcgccggaga gcggcaagct
     9541 ggattcggtg cacgtccagg tcgtcaacgt ggccaccggc gcgatccgtt ccctcaacga
     9601 cgcgcggcgg tttcagaaca acccggtgtt ctcgcccgac ggcagcatgg tggcctactg
     9661 gtggccccgc gagggccggg gcgacctggt ctgggagaat gaagtgtggg tggcgccggc
     9721 taacgggggg ccgggccgga gcctgacccg ggcgatcgac cgcaatctct tcggggcgca
     9781 gtggatgccg gacggcaagt cgttgctggt cgcgggcaac gatcgcgcgg gcgtgggcgc
     9841 ctggatccag ccgctcgacg gcgccgcccg ccggctcgat ctcggagacc tggtggtgaa
     9901 cggcgccttc ggctatgaca tcaccgtggc ggcgaagagt cccgtcatcg ccttcaccgc
     9961 cacatcgccc gaccgcccct cggagcttta cgtcatggat actccagccg ccaagccgag
    10021 gcggctgacc gacttcaatg gttgggccag ggatgtggct tggggatcca tggaacggat
    10081 cacctggaag tcggatgccc tggagcccga cggtgtcgtg gtctatcccc ccggcttcca
    10141 gcgctcacgc cagtatccgc tggtgctcct gatccacggc ggtccgcagg ccgcctccaa
    10201 gctgcagttc tcggccctgg cccagctcat ggcggcggaa ggctgggtcg tattccagcc
    10261 taactaccgc ggcagcgaca acctcggcaa cacccatatg gccgcgatca tcggcgatgc
    10321 cggggccggg cccggacggg atgtcatgag cggcgttgcc ctgctccgca agcggccgta
    10381 catcgacccg aaacacaccg cggtgaccgg ctggtcgtac ggcggctaca tgaccagctg
    10441 gctgatcggg aactaccccg acgaatggca ggcagccatg gcgggcgcgc cggtgaccag
    10501 ctgggaagat caatacaact tcggcgacgg cagcgtcacg gtgcgctatc tgttcggcgg
    10561 ctcgccctgg accggcgggc gaatccaggc ctaccgggag cagtcgccca tcacctacgc
    10621 cacgaagatc aagacgccca cactggtgat gtcgaacatg gaggacttcc gggtgccgcc
    10681 gacccaggcc tttcagctct accgggcgat gaaggacaac ggggtggaaa ccgagttcat
    10741 cggattcaag ggacggaccc acgccagcag tgatccggtc aactcgcgcg agcgggcccg
    10801 gctgtgggtc gactggctca agcggcatct gggccagacc gcggcaacgc cctagcacaa
    10861 cggcccgggc cagtctccac cccatgggag aacggacccg ggcctcgctt cgctcgcctg
    10921 ctcctgcagt gacacatacc agggtatcgt gcgcggttct cccctgaggg agaaacaaaa
    10981 agggcgcact atcgcttccg cgattccgtg cgcccgctgc tggagagtcg tttctccccc
    11041 gcacgagcaa ggccggccac caccggccat actggcgtgt ggagtctagt cacatcctga
    11101 cgggcgggtc ggtgaggcaa gtcacgttga ccgtcagcgg accgacctgt atactgccaa
    11161 gcagtggtcc cggaacggga tcgtcggccg cggcaatggg ccgccttgtc gagcggattg
    11221 aaagaatccg cgagtcgaag gcacgaatgg agccctcagc atcgggccac attcgtgcct
    11281 tttcatttct ttcatccgaa catcgctgga ggcagtctgt caccctggac cggcacggat
    11341 ctcgggatcg tcagccgacg ggttcacgcc atcacccgcg ggctaggctg gacgcttgcg
    11401 attctcggca tcgccggcac cactggctgg ctcctcgcgc acggcaagct tgcccagccg
    11461 gccgcgggct ttcctcccga ttccctgatc gagccggtcg ccatcttcat catcggcctc
    11521 ggcctggtga gcgccgcggc cggccgcgcg cggggcccgg cgctcgcggg ggcggcgatc
    11581 atctgtttcg gcgtcgccgc cctgatccgc cagatcttcc atgtcgggcc agaggcgctg
    11641 ctccgcgatc cgggcgccgc gcctggtaca ctggttccgc tctcggttcc ggtctcgagc
    11701 gcgctgctct tcctcacggc cggcgtcggg ctcatcggcc tggcgctgcc gatgcggctc
    11761 gaccgcagcc ggctcgccgc cggcacgttc ggagcgatcc tcgccgtcct gagccttggg
    11821 ctcatcgcgg tgcgcctcat gtggcgcccc gatgcccagg gaagcctgct ggtcggctcc
    11881 tcggttctcc tcctcgccgc gagcctgctg ctcggttcct gcctcggcct catcacctgg
    11941 agcagcgacc ctgacaccgc ctccacgccg tgggtgccgc tcacactggg cgtcgcctgc
    12001 cttgcgacat cgctattcct ctggcgcgca ctggtcgcct acgagcagga ccagatccgc
    12061 gagctcaccc gggtggcctc ccacaccgcg cggctccaga tcgaacagca ggtcaatgcc
    12121 gccaccaagg tgctgagccg gatcgcgcgc ttctcgcccc ggagccgcgt gaaggaaaac
    12181 agtgccgtgg cgctcacccg cgacgtcgat ggcctccgcg gcatcgtgtg gctcgactcg
    12241 gcctaccacg tgatccaggt ccggccccag acgatcgatt cggccgaatt gcggatggac
    12301 ctcgaacggc tcctcccggg cgaaatggac accatcgcct ccgagtcgca gccggtgcac
    12361 tacttcacct tgagccggcc caacggggtc gccatcgctc ttccttattg tggcgaggcg
    12421 cgctgcagcg gataccaggt tggcatcttc gattccgaac ggctgctgga gccggccctg
    12481 gccgatagcg ggagcgggtt cattcatgcc gttgcccagc agcgtcgcac catcgtctcc
    12541 ccgcccggac gggtgctgct gccggtggaa tggacccagc attcccggta cgccatcggc
    12601 aacatccagt gggacctggt gacctggccc agtgaccaga ccctcaaccg gctccgctcc
    12661 ggcctgcccg atctgctgct cctcctcggg ctcctggtct cgaccctgct cccgctcgcg
    12721 atccgtctcg gccagatgaa cctcacccgg gcgcggctgg ccgagcgggt ccgggtcaat
    12781 ctcgccctcg aaaccgcgac cgacggcatc tgggagtggg acgtgaccac cggaaacgcc
    12841 cgccggagcg ccgcgctctg gcggcacctc ggctacaacc ccggcgcgat gagtaccggc
    12901 gccgacccgt ggtcgtccct gattcacccg aacgatcaga cccgggtgat gaacgccctg
    12961 tccgatcacc tctccggcct gacccagacg ttcgaggcgc gctaccgcat ccgcggtcac
    13021 gccggcgact ggcactgggt gatcgaccgc gggcgcgtgg tcgagcgcag tcccaccgga
    13081 cagccacgcc gggtgctggg tatcagcgcc gatgtgaccg accgccagcg ggccgacgag
    13141 gcgctggccg cgagcgagcg gcgcttccgc gcgtccttcg acagcgcggc ccaggtgctg
    13201 ctgctgctcg acgccgatgg gcgggtcctc gaggccaatc acgcggcgct cgatttcacc
    13261 aagctggatc tgccggcgct ccggggcctg ccgctctggg aactgccgtg ctggcgcgac
    13321 ggcgccgagg cggccgggga ggtgcgggcc gacgtgctgg aggcgctgga aggcgccccg
    13381 gtgcgccgcg aactcgagct ggtcgacgcc aagggcgagg tgctcctgct cgaactcctg
    13441 atttcgccga ttcacgacgc gggcggccag gtctttcagc tgctcgccga tggccgggac
    13501 atcacggtgc gcagacgggc cgaggacgtg ctgcgggaag tggaatcgct gaccacgatg
    13561 gggcggatgg cggcgcgggt cgcgcacgaa atcaacaacc cgctcgccgg gatccagaac
    13621 gcgttcctgc tcatcaagga tgcggtcccg gccgaccacc cccatcgcgc ctatgtgggc
    13681 gcggtcgaac gggagatcgc gcggatcgcc ggggtgaccc gccagctcta tgagacctat
    13741 cgccccgagc agaacggggc gcacggtacc tcggtcaccg gcctcgtatc cgacgcggtg
    13801 gcgctgctgg agcagatcaa ccgcggcacc ggcgtcaaga tcgatgtcaa tctcaccggc
    13861 gtgcccggca cggtgcggct gcccgaggcc atccttcgcc aggcgctcta caatctggtc
    13921 cagaacgcgg tcgaggcatc tccgcccggt ggcgtggtgg aggtcgtggc cacggtcgat
    13981 gccggcgtat tcatcctgcg ggtgcgcgat cggggccccg gaatccctgc cgaaatccgg
    14041 gaacgggtct tcgagccgtt cttcaccacc aagtccgcca cggtgcgtac cggcgggatg
    14101 gggttgggcc tgtcgctcgt cggccgctcg gtccaggcac tcggcggcca cgtcgagatt
    14161 cacgaccggg atggcggggg caccgagttc gtggtgcggc tcccgattcc cccggtgaca
    14221 cccaaggtgt tcgcatgagt cagggccgca ttctgctcgc ggatgacgag ccgaccttcc
    14281 tgaattccac cgccgatctg ctgcggcgcg agggctatgt ctgtgacacg gtgtccgacg
    14341 gcgtctccgc gctggccaaa gtcgaggcca atccctacga cctgctgatt accgacctcg
    14401 agatgccggg caacagcgac cttggactgg tccgcgccat cgccgcctcg cgcggcgggc
    14461 ttccggtgct ggtgatcacc ggcgttccct cggtccggtc ggccatggcg tgcgtggagc
    14521 tcccggttgc ggcctatctc ctgaagccgg tcgtgttcgg cgacctcctc cccagggtgg
    14581 agaccgcggt cagccgattc cgctcctggc aggcgatgca gcaggcggag cagcggctca
    14641 ccgagtggcg gcgtgactac gagcacgtcg ccaacggggc gggcgccccg ggcaccggca
    14701 tcgacgtgtt cctgtcgctc acgcttcgga acgtgatggg ttccctcacc gacctgcagc
    14761 agctgggccg ggcgctgtcg gggaagccgg tggaggagca tccctgccag ctcctcaact
    14821 gcccgcgcgg cgcacagctg caggaggcgg tgcgggaaac catccgcgtg ctggaggaaa
    14881 ccaagcacgc gttcaaatcg aaggcgctgg gagagctgcg tcacaagctc gagctgatgc
    14941 tcgagctgga cggaatccgc ccctgactgg tgtgatcgac ggcacatcca gccgccgggg
    15001 tggttggtag gttgcgcgtg caggccatac agagcccggg gtcttccggg caccttggcg
    15061 gatgaggttc gcgactcatc agtcgaaggc gcgactggtc ccacgtacgg ggaaccacgc
    15121 gccttttttc atttcctggc ctgctgcagt catagatgag ggcggcgccg gtccggctgc
    15181 cggagaggag cgcaattgta tgtcgcagca taccacactc cgtttgacct tcgccgtgct
    15241 gatcgtggcc ggcgcggggc cggcgcatgc ctttgcccag agcagcagca ccacagtcgg
    15301 ggtctacggc gggctctact cgcccctggg aagtgatcct cgcctgagta cggtgggaac
    15361 gcaggtcgat cgcaacaaca gtttcgtcgg gggcgcccgt ctcaactact ggggtcccgg
    15421 ggtgctgggg ctcgagctgg agggcgggct cactccggcg aaagtcgacg tcgccggggc
    15481 gccgatcaac cggagcagga accaggacat cctgaccgtg gcgctccggc tgatggccgg
    15541 cgtgagtccg gcggtgtctc cgctgggatt tcatctcggc gtcggtccgg cgttcatccg
    15601 ccgcaacagt gacgcgttcc agcagagcgg cagtctgagc cgcttcggga tcgtggccgg
    15661 tggcggtttc cggtttccca tcgccagccg gctgcatctc cggttcgacg cggaagacta
    15721 catctacggg ggaaagctcg gttccgacag caagacctgg aacgacctgg tgttgtcggc
    15781 cggcctggga gtacagctcg gcgggcggac ctccggatac gaccgatagg agaacgatca
    15841 tgaactggca cgaaatacag ggccgctgga ccgaaatgcg cggccgggtg cgggaacgat
    15901 ggggcaagtt gaccgatgac gatctcgacg tggtcgccgg caaacgcgac cagctgatcg
    15961 gcgtgctgca acagcgctac ggacagacgg tggatcagat cgaggagcag gtcaacgagt
    16021 tcgaacggcg ggtctttgcc cgactgtagc accgacgggc ccggaccggc ccgccaacct
    16081 cggagtactg cgatgtccct ggattcgatg cgggatctgc tggtgcgaga gctgcgcgac
    16141 ctgtacagcg cggggaccat ggtcctcaag gcgcttccgg ccctcgcgtc ggccgtcacc
    16201 acccggccac tccgggagtt gctggtggat cattcgcacg aagccgagac ccagctggac
    16261 cgtctggaat cgatcttcgc gtcgctcggc agcgacccct gggggctgcg ctgccgcggg
    16321 atggagggat tggtcgagga aagcgtcgtg ctcctcaccg agcacggcga ccagacggtg
    16381 cgcgaggcgg cgatcgcggc ggaagccctg cggatcgggc atttcctgct cgcaggctat
    16441 caatccgcct gccgccatgc gcggaacctg tggctcgacc cgctggtcga gccgctgacg
    16501 gtgacgctgg cggagatcca gtccatcacc gcccaactca cgactctggc agaacaaatg
    16561 acgccgaccc aggccctggc ggaagcctcg ggccgggagg cgtagcagaa ccgcacgtcc
    16621 gcgatgcgcc gccggagcga actcaactcc gcggccaccg cactcttccc cgtaccaccg
    16681 cttgccacca gaaggggacc ggcgtccgac ggcgccggtc tcctcccccc ttttttggcc
    16741 attagccgtt agccattagc caccaggcca attcgatgtc aggcgacttc ggggccagac
    16801 tcggcttatt ggctcttcct cacggctaac ggctaacggc caacggcctc tcacctctag
    16861 agtgtccatc ctttccggta caccggcttg agccactcgt ccgggaccgt ctgggcgatg
    16921 ctgcccttct ccggatcgac atcgatgggc tgacccaggc gcaccgccac acatccgagc
    16981 agcaccatct cggtgagcgg gccggcgtga ccggcgaagg tcgacaggtt tggcgccccg
    17041 cctttcatgg ccctgatcca ctcggcatac accccgggag agcgctcgta cttctgcggt
    17101 accgggttgg ccttgagctc ggcgtcgcgc ttggcgtcga ggagccgggg attctccccg
    17161 tacatgccgg ccaggatcgc gccggtgtct ccaacccaca tctgtccacc gatttcctcc
    17221 ggcggccagt tggtgccatc gggcaggccc tcgggccgcg gcggccagag tccgccgtcg
    17281 cgccagacca ccttgacctc gccgcgcccg ttccgcgccg ggaagcgata ctcgatccgc
    17341 gaggacttgg gtgcggtctc ggtgtactgc ttggtggtct ccggaatgat ccgggtggga
    17401 tacctcaggt cgaggcccca gaaggccgcg tccatgccgt ggcacgccat gtcgcccagc
    17461 gcaccggtgc cgaaatccca ccagccgcgc cagctgaacg gcgcgtaggc cggattgtac
    17521 ggccgctccg gcgccgggcc gagccagaga ttccagtcga gagtcggggg cgggacgtgg
    17581 agcgcggtcg gacggtcgat gccctgggcc cagatcgggc ggttggtcca gtagtgcacc
    17641 tcccgcaccg ggccgatgac gccggcctcg acccactcgc ggattacccg gcacccttcg
    17701 aaggtgtggc cctggttgcc catctgggtg cactgcttcg gccggcgggc ggcctcctgc
    17761 atcagcgagc ggacttcgcc cagggtccgc gccagcggct tctggcagta gacgtgcttg
    17821 ccggccttga gggccagcat cgccgcggcc gcgtgattgt ggtcgggcgt cgagacggtc
    17881 actgcatcga tgttcttcgc ctcccggtcc agcagctcgc gataatcctt gtagcgccgg
    17941 gccttgggat aggtccggaa ggcgtcgtcg gccgcattcc agtcgacatc ggcaaaggcg
    18001 accagattct ccccttccat tccgcgcacg tcgttccgcc ccatcccccc gacgccgatg
    18061 cacgccacgt tgagcgtatc gctcggcgcc cggtaccccc gtcccagcac gtggcggggc
    18121 acgatgtgaa agagacccac cccggccgcc atggtggaga cgaagtcgcg acgattgggt
    18181 ttgttcggca tgctctgcct ttgcggttcg gttgtttcgg gaactgcata cacagatgaa
    18241 caggatgaga acggatgcac cggtctctgc cgggcaccgc cccgcaggat ctcatctcag
    18301 acgtcagtag cgaatcagaa tcggtaaatc cgtcccgtat gctggcgact atgctcctgg
    18361 cacaggcaca ccaacccttg cacggagacc agcatccgta cccatcggtg g
//
LOCUS       DATIFF010000907         1059 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2265660, whole genome shotgun sequence.
ACCESSION   DATIFF010000907 DATIFF010000000
VERSION     DATIFF010000907.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2265660"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..491
                     /locus_tag="VLD58_13305"
     CDS             <1..491
                     /locus_tag="VLD58_13305"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSB55333.1"
                     /translation="TVPADQLEGLKVGTSVSFAVAGVGDLEGRITRINPAVDPATRQV
                     RLTVGVPNTGGRLLAGLFADGRVATSTRKSIVAPSGAVDRRGIRPFVVRLKSGRVERV
                     EVQLGLIDEAHEQMEIQSGLAPGDTLLLGGARGLSPGTVVRVGSPAELTGSQAATVPA
                     KE"
     gene            495..>1059
                     /locus_tag="VLD58_13310"
     CDS             495..>1059
                     /locus_tag="VLD58_13310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSB55334.1"
                     /translation="MLISDFAIRRPVITVVSMLALSVFGIVALLKLKTDEFPDVAPPF
                     VSVGIPYPGGSPDVVEREVLEPVEEVIASISGVKKMQGSAQDGFAQITIEFQFDKPLL
                     EATQDIRDAISTIRADLPEEMKEPIIKKLSDTDRPIVSLALSSETLSAAELTRLADPG
                     IARELRSLGGVAEVNVLGKHERELTVLL"
BASE COUNT          168 a          364 c          378 g          149 t
ORIGIN      
        1 gaacggtccc cgccgatcag ctcgaagggc tcaaggtcgg aaccagcgtc agcttcgcgg
       61 tggccggggt gggcgacctc gagggcagga tcacccgcat caacccggcg gtcgatcccg
      121 ccacgcggca ggtgcgcctg acggtcgggg tccccaacac cggcgggcgg ctcctggcgg
      181 ggctgttcgc ggacggccgc gtggccacca gcacccggaa gagcatcgtc gcgcccagcg
      241 gcgcggtgga ccggcgcggc atccggccct tcgtggtgcg gctcaagagc ggccgggtgg
      301 aacgggtgga ggtgcagctc gggctcatcg acgaggccca cgagcagatg gagatccaga
      361 gcggactcgc cccgggagac accctgctcc tcggcggcgc ccgcggcctc tcccccggta
      421 ccgtggtgcg ggtgggaagt ccggcggaac tcaccggcag ccaggcggcc accgtgccgg
      481 ccaaggagta ggccatgctc atctccgatt tcgcgatccg gcggccggtc atcaccgtcg
      541 tgagcatgct ggcgctgtcg gtgttcggga tcgtggcgct gctcaagctc aagaccgacg
      601 agttccccga cgtggcgccg ccgttcgtct cggtcggcat tccctacccc ggcggctcac
      661 ccgacgtggt ggagcgcgag gtgctggaac cggtcgagga ggtcatcgcc tcgatcagcg
      721 gcgtcaagaa gatgcagggc tcggcccagg acggctttgc ccagatcacc atcgagttcc
      781 agttcgacaa gccgctgctc gaagcgaccc aggatatccg cgacgccatc tccaccatcc
      841 gggcggacct gccggaggag atgaaggaac ccatcatcaa gaagctgtcg gacaccgatc
      901 gacccatcgt gtcgctggcg ctctcgtcgg aaacgctgag cgccgcggag ctgacccgcc
      961 tggccgaccc cggcatcgcc cgggagctgc gctccctggg aggcgtggcc gaggtgaacg
     1021 tgctgggcaa gcacgagcgg gagctgacgg tcctgctcc
//
LOCUS       DATIFF010000908         2000 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_418878, whole genome shotgun sequence.
ACCESSION   DATIFF010000908 DATIFF010000000
VERSION     DATIFF010000908.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2000
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_418878"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..181)
                     /locus_tag="VLD58_13315"
     CDS             complement(<1..181)
                     /locus_tag="VLD58_13315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55335.1"
                     /translation="MSVVPLPERRERLAAIDVGSNSIRLLVAEVGPHSGITVIDEVKE
                     QPRLAAGVAQTGRLDP"
     gene            complement(183..896)
                     /gene="phoU"
                     /locus_tag="VLD58_13320"
     CDS             complement(183..896)
                     /gene="phoU"
                     /locus_tag="VLD58_13320"
                     /inference="COORDINATES: protein motif:HMM:TIGR02135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HSB55336.1"
                     /translation="MSLDIHRHFHDELSHVKVRLLTMSGEAEAALGLAVEALLERDPD
                     KAHRVIVGDRVIDSMEVEIEEQCINLLALQQPMARDLRMLTSALKIANDLERVGDHAV
                     NIAQSAERLTQSRPIAPEPEIVEMARLARDMLSDALEAFIRGDAAAGREVCRRDDKVD
                     QLHRSVFRILLTHMMEDPHMIGAGMELFLVSRNLERVADLATNIAEDVVVLVEGKSIK
                     HHAEDRGEPRASGATRVPV"
     gene            complement(893..1741)
                     /gene="pstB"
                     /locus_tag="VLD58_13325"
     CDS             complement(893..1741)
                     /gene="pstB"
                     /locus_tag="VLD58_13325"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HSB55337.1"
                     /translation="MSVGVRPRPAPVVIPRATLAPRPPQAREPERGGPAVDVREFSFW
                     YGSRQVLRNLTFALERKAVTAIIGPSGCGKSTFLRSINRLNDLIPGVRHAGDILLEGR
                     SVFGPAADLVTLRQRVGMVFQRPNPFPKSIFDNVAFGPALNRLVPRRDLPDLVERCLR
                     QAALWDEVKDRLEEPGTGLSGGQQQRLCIARALGNQPEVLLMDEPCSALDPIATQRVE
                     ELIVELKRDYTIVIVTHNMQQAARVSDFTGFFDRGELIEFSETERLFTTPVHERTEAY
                     ITGRFG"
     gene            complement(1738..>2000)
                     /gene="pstB"
                     /locus_tag="VLD58_13330"
     CDS             complement(1738..>2000)
                     /gene="pstB"
                     /locus_tag="VLD58_13330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979518.1"
                     /note="ATP-binding protein; PstABCS is an ATP dependent
                     phosphate uptake system which is responsible for inorganic
                     phosphate uptake during phosphate starvation; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HSB55338.1"
                     /translation="PDVVLLDEPTASLDPQGTQRIEELLFELKESFSILIVTHNMQQA
                     ARVSDTTTFFYLGTMVETGPTRQIFTAPRNEQTEAYITGRFG"
BASE COUNT          286 a          668 c          721 g          325 t
ORIGIN      
        1 tggggtcgag ccggccggtc tgcgccacgc cggcggcgag gcgcggctgc tccttcactt
       61 cgtcgatgac ggtgatgccg gagtggggtc cgacctccgc gaccagcagc cggatcgaat
      121 tggagccgac gtcaatcgcc gccagccgct cgcggcgctc gggaaggggg acgacgctca
      181 tgtcagaccg gtacccgggt tgcgccggag gcgcggggct cgccccggtc ctcggcgtga
      241 tgcttgatcg acttgccttc gacgaggacg accacgtctt cggcgatgtt ggtggccagg
      301 tcggccaccc gctcgaggtt ccggctcacc aggaagagct ccatcccggc gccgatcatg
      361 tgggggtcct ccatcatgtg ggtcaggagg attcggaaca ccgatcggtg gagctggtcc
      421 accttgtcgt cccggcggca gacctcccgc ccggcggccg cgtcgccccg gatgaacgcc
      481 tcgagggcgt ccgagagcat gtcccgcgcg agccgggcca tctcgacgat ctcgggctcg
      541 ggggcgatcg gccggctctg ggtgagccgc tcggccgact gggcgatgtt gaccgcgtgg
      601 tcgcccaccc gctcgagatc gttggcgatc ttgagcgccg aggtgagcat ccggaggtcc
      661 cgggccatcg gctgctggag ggcgaggagg ttgatgcact gctcctcgat ctccacttcc
      721 atgctgtcga tgacccggtc gcccacgatg acccggtggg ccttgtcggg gtcccgctcc
      781 agcagggcct cgaccgccag tccgagggcc gcttccgcct cgcccgacat ggtgagcagg
      841 cgcaccttga cgtggctcag ctcgtcgtgg aagtggcggt ggatatccag gctcatccga
      901 atctcccggt gatgtaggcc tcggtccgct cgtggaccgg ggtagtgaag agccgctcgg
      961 tctcgctgaa ctcgatcagc tcgccccggt cgaagaagcc ggtgaaatcc gacacccgcg
     1021 ccgcctgctg catgttatgg gtgacgatca cgatcgtgta gtcccgcttc agctcgacga
     1081 tcagctcctc gacccgctgg gtggcgatcg ggtcgagggc agagcagggc tcgtccatca
     1141 ggagcacctc gggctggttc cccagggccc gggcgatgca gagccgctgc tgctggccgc
     1201 cggagaggcc ggtgccgggc tcctccagcc ggtccttcac ttcgtcccag agggcagcct
     1261 gccggagaca gcgctccacc aggtcgggca ggtcgcggcg gggcaccagg cggttgagcg
     1321 cggggccgaa ggccacgttg tcgaagatgc tcttaggaaa cgggttgggg cgctggaaca
     1381 ccatccccac ccgctgccgc agggtcacca gatcggccgc gggaccgaac accgaccggc
     1441 cctccagcag tatatcgccg gcgtggcgga cgccggggat gaggtcgtta agccggttga
     1501 tcgaccggag gaaggtggat ttcccgcacc ccgacggtcc gatgatcgcg gtgaccgcct
     1561 tccgctcgag cgcgaaggtg aggttccgga gcacctgccg gctgccgtac cagaagctga
     1621 actcccgcac gtccaccgcg gggccgcccc gctccggctc ccgggcctgg ggcggccggg
     1681 gagccagggt ggcccgggga atcaccacgg gggcgggccg gggccgcacg ccgacgctca
     1741 tccgaacctc ccggtgatgt aggcctcggt ctgctcgttc ctcggggcgg tgaagatctg
     1801 ccgggtgggc ccggtctcga ccatggtccc gaggtagaag aaggtggtgg tgtccgacac
     1861 ccgcgccgcc tgctgcatgt tgtgggtcac gatgaggatg ctgaagctct ccttgagctc
     1921 gaacagcagc tcctcgatcc gctgggtccc ctggggatcg agcgacgcgg tcggctcgtc
     1981 gagcagcacg acgtcggggc
//
LOCUS       DATIFF010000909         1454 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_418933, whole genome shotgun sequence.
ACCESSION   DATIFF010000909 DATIFF010000000
VERSION     DATIFF010000909.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1454)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1454)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1454
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_418933"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1284
                     /locus_tag="VLD58_13335"
     CDS             <1..1284
                     /locus_tag="VLD58_13335"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HSB55339.1"
                     /translation="VTVIGALSYAELAAMMPKAGGQYVFLREGLSPAAGFLYGWTLFA
                     VIQTGTIAAVAVAFARFLSVLVPGVSPDVFLPLGQLRLPGASDAIQLGLSPQRVVAIL
                     SILFLTVINVRGVRLGAAIQTVFSVAKVGALVVLVIFGLTFFRRPEIAAANFANFWGT
                     GDWTLAIIPALGAASVGSLFSSDAWNNVTFAAAEVQNPSRNVPLALGLGTLTVSLLYI
                     LSNVAYLNILPFAGDPNGADALARGIQHAAQDRVGTAAIEVAMGSAAATVMAIAILFS
                     TFGCNNGLILSGPRVYWAMARDRLFFEGAGRLHPVYRTPVAGLAFQAIWASVLCVSGT
                     YGQLLDYVIFAALVFYFLTAVALFRLRRLRPDLPRPVKAFGYPVLPALYMLAVGALMV
                     ILLFEKPLYTWPGLLIVATGIPVYLLWRRSGSAVR"
BASE COUNT          169 a          516 c          501 g          268 t
ORIGIN      
        1 gtcaccgtga tcggcgcgct ctcctacgcc gagctggcgg cgatgatgcc gaaggcgggc
       61 ggccagtacg tgttcctccg ggaagggctc tcgccggcgg cgggctttct ctacggctgg
      121 accctgttcg cggtgatcca gaccggcacc atcgccgcgg tggccgtggc gttcgcccgg
      181 ttcctcagcg tgctcgttcc cggcgtcagc ccggacgtct tcctgccgct gggccagctc
      241 cggctgcccg gggcttccga cgcgatccag ctcgggctct cgccccagag ggtcgtggcg
      301 atcctctcga tcctgttcct caccgtcatc aacgtgcgcg gcgtcaggct gggtgccgcg
      361 atccagacgg tgttcagcgt ggccaaggtg ggggcgctcg tggtgctggt gatcttcgga
      421 ctcaccttct tccggcggcc cgagatcgcg gcggcgaact tcgccaactt ctggggcacc
      481 ggcgactgga cgctcgcgat cattccggcg ctgggtgccg caagcgtggg ctcgctcttc
      541 tccagcgacg cctggaacaa cgtgaccttc gccgcggccg aggtgcagaa cccgagccgc
      601 aacgtgcccc tggcgctcgg cctcgggacg ctcacggtga gcctgctgta tatcctgagc
      661 aacgtcgcct acctcaacat cctccccttc gccggcgacc cgaacggagc cgacgccctg
      721 gcccgcggca tccagcacgc tgcccaggac cgggtgggca ccgctgccat cgaggttgcc
      781 atgggctcgg cggcggccac cgtgatggcg atcgccatcc tcttctccac cttcgggtgc
      841 aacaacgggc tgatcctgtc ggggccccgg gtctactggg cgatggcgcg ggaccggctg
      901 ttcttcgagg gcgccggccg gctgcatccg gtctaccgga ccccggtggc gggcctggcc
      961 ttccaggcga tctgggcctc cgtgttgtgc gtgagcggga cgtacgggca gctgctcgac
     1021 tacgtcatct tcgccgcgct ggtcttctac ttcctcaccg cggtggcgct cttccggctc
     1081 cgccgcctcc ggcccgacct gccccggccg gtcaaggcat tcgggtaccc ggtgctcccg
     1141 gcgctctaca tgctggcggt gggggcgctg atggtaatcc tgctgttcga gaagccgctg
     1201 tatacctggc cggggctgct catcgtggcg acgggcattc cggtgtacct gctctggcgc
     1261 cggtcgggct cggccgttcg ctgaggggga gccgaaaagc cgtcctgcgc ccacgccgcg
     1321 atcgggtcac ggggtgggct cgaggtactc gtcgcttcgc ttgggacaag tcaccgccgg
     1381 atcggcggcg atcgtgaacg gtctaccgga gcgcccgctc cgccagctgg agcagctggg
     1441 cgtcgctcat ggcc
//
LOCUS       DATIFF010000910         1801 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_880236, whole genome shotgun sequence.
ACCESSION   DATIFF010000910 DATIFF010000000
VERSION     DATIFF010000910.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1801
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_880236"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..980
                     /locus_tag="VLD58_13340"
     CDS             30..980
                     /locus_tag="VLD58_13340"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HSB55340.1"
                     /translation="MPSLGKDLTGLEHLSAEQIQLILDTAEPFKEVSERPIKKVPALR
                     GKTIVNLFFEASTRTRISFEFAEKRLSADTVNVAPGISSVSKGETLVDTARNLEAMRI
                     DMVVIRHHASGSAEFLGRRIRSNVINAGDGKHEHPTQALLDLLTLRDRFGRIAGLKVA
                     ICGDVLHSRVARSNIWGLQKLGAEVAVCGPPSLVPREMAQLGVTVLTRIEDAIAWADA
                     LNVLRLQLERMTGGFIPSLREYNRVFGVTRERLERAGRDVVIMHPGPMNRGVEIDSDV
                     ADGPFSLILPQVTNGVAIRMAVLYLLTGGAPDWQQQGGGE"
     gene            977..>1801
                     /locus_tag="VLD58_13345"
     CDS             977..>1801
                     /locus_tag="VLD58_13345"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HSB55341.1"
                     /translation="MTRPILIQGGRVIDPSRSSDGIADVYLRDGRVAAVGRGIVGEDG
                     VRVIDATGKVVAPGLIDLHVHLREPGQEDLETVATGAMAAAAGGFTAVCAMPNTDPVL
                     DNQGAIGFVISQAQKAGKARVYPIGTISLGQKGEKLAEIGELIGAGAVAVSDDGRPVM
                     SSHLMRTALEYARTFGIPIADHCEDLALAQGGAMHEGVVSTRLGLKGIPAAAEEIMVA
                     RDILLAELTGGHVHLCHMSTRGSVELIRWAKQKGLRVTAEATPHHFTLTHERCLGYD"
BASE COUNT          290 a          585 c          663 g          263 t
ORIGIN      
        1 gaggccatcc ggaggccggg gtgacggcgg tgccctcgct cggcaaggac ctgaccggcc
       61 tggagcacct ctcggccgag cagatccagc tcatcctgga tacggccgag ccgttcaagg
      121 aagtgagcga gcggccgatc aagaaggttc cggcgctccg gggcaagacg atcgtcaacc
      181 tgttcttcga ggcgtccacc cgcacccgga tctccttcga gttcgccgag aagcggctct
      241 ccgccgacac ggtgaacgtc gcgccgggga tcagctcggt ctcgaagggc gagacgctgg
      301 tagacactgc ccggaacctc gaggcgatgc ggatcgacat ggtggtgatc cgccatcacg
      361 cctcgggctc ggccgaattc ctcggccggc ggatccgctc caacgtcatc aacgccggcg
      421 acggcaagca tgagcacccc acccaggcac tgctcgacct gctcacgctg cgggaccgct
      481 tcgggcggat cgccggactc aaggtggcca tctgcggtga cgtactgcac agccgggtgg
      541 cccgcagcaa catctggggc ctgcagaagc ttggcgccga ggtggcggtg tgcggcccgc
      601 ccagcctggt gcccagggag atggcccagc tcggcgtgac ggtcctgacg cggatcgagg
      661 acgcgatcgc ctgggccgac gcgctgaacg tgctccggct gcagctcgag cgcatgaccg
      721 gcgggttcat cccctcgctc cgcgaataca atcgggtttt cggggtgacc cgcgagcggc
      781 tggaacgggc cgggcgggat gttgtgatca tgcaccccgg accgatgaac cggggcgtgg
      841 agatcgacag cgacgtggcg gacggtccct tcagcctgat tctgccgcag gtgaccaacg
      901 gcgtcgccat ccggatggcg gtgctctatc tgctcaccgg cggcgcgccc gactggcagc
      961 agcagggagg tggggagtga cgcgcccgat cctgattcag ggcggccggg tgatcgaccc
     1021 gtcgcgcagc agcgacggaa tcgcggatgt gtatctccgg gacgggcggg ttgcagcggt
     1081 ggggcggggg atcgtgggtg aggacggggt gcgggtcatc gacgcgacgg gcaaggtggt
     1141 cgcgcccggc ctcatcgacc tgcacgtgca cctccgcgag cccggtcagg aggacctgga
     1201 gacggtggcg accggcgcca tggcggcggc ggccggcggg ttcacggcgg tctgcgccat
     1261 gcccaatacg gatccggtgc tcgacaacca gggggccatc ggattcgtga tcagtcaggc
     1321 ccagaaggcg gggaaggccc gggtctatcc gatcggcacc atctccctgg gccagaaggg
     1381 cgagaagctg gcggaaattg gcgagctgat cggggcgggc gctgtggcgg tgagcgacga
     1441 cggcaggccg gtcatgtcga gccacctgat gcggaccgcg ctcgagtacg ccaggacctt
     1501 cggcattccc atcgcggacc actgcgagga cctggcgctg gctcagggcg gcgcgatgca
     1561 cgagggggtg gtgtccaccc ggcttggcct caaggggatc ccggcggccg ccgaggagat
     1621 catggtcgcg cgagacatcc tcctggccga gctgaccggc ggccacgtgc acctctgcca
     1681 catgtccacc cgcggctcgg tcgagctgat tcggtgggcc aagcagaagg ggcttcgggt
     1741 gaccgccgag gcgacgccgc atcacttcac cctcacccat gagcgctgcc tcggctacga
     1801 c
//
LOCUS       DATIFF010000911         3246 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_419384, whole genome shotgun sequence.
ACCESSION   DATIFF010000911 DATIFF010000000
VERSION     DATIFF010000911.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3246
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_419384"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            357..1196
                     /locus_tag="VLD58_13350"
     CDS             357..1196
                     /locus_tag="VLD58_13350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloprotease HtpX"
                     /protein_id="HSB55342.1"
                     /translation="MNNLKTAVLMAGLVALLMAAGQLLGGTNGLILGSILGLGMNFVM
                     FFFSDKLVLRMYGAQVVTREQAPELYQLVDRLRQRAGLPMPVVAVAPHEQPNAFATGR
                     SPERAVVAVTTGILKAMPQEELEGVIAHELAHVKNRDMLISTIAAGIAGMIGNLPWLL
                     MFAGGSRDDDGRHPLMDLAMVILAPLAAMLIQFAISRQREFEADRVGAEILGRPLPLA
                     RALRRLDYMAQRIPMEVAPAAAPLAQVNPLAAMGGGITRWFSTHPPTEERVARLEAMA
                     LGR"
     gene            1197..2144
                     /locus_tag="VLD58_13355"
     CDS             1197..2144
                     /locus_tag="VLD58_13355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HSB55343.1"
                     /translation="MAQHTTEVWVVFGLVVAGLLILDLGVLNRRSHVLSTKESLSWSA
                     GIISLALLFGAYLGWRSGWHSGLEFYTGYLIELSLSVDNLFVFLLIFQYFGVPDKQQP
                     RVLKWGIFGAMVMRGIMILAGALLLQRFTWIVYVFGGILVVTGIRMFSGGDTRIEPEK
                     NPLVRLARRIFPVCNDYREEHFLVRDAHHKWMATPLLLVLLVVEWSDLVFAIDSIPAV
                     FAVTRDPFIVYSSNLFAIMGLRALYFVLSGAMDRFHFLKPAVACILIFVGLKMVGSAW
                     FHLPTVASLAVIVLTLTAGVVLSLLRPKTAPKAASPAGP"
     gene            2178..2963
                     /locus_tag="VLD58_13360"
     CDS             2178..2963
                     /locus_tag="VLD58_13360"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSB55344.1"
                     /translation="MTDLWSGTTALITGASRGIGAAFADALAARGANLILVARNAGTL
                     EPVAERARRLGQSVQVLPDDLEDPAAPARLVEAIERLGLTVDHLINNAGIGPNGLFHG
                     QPPETHLPTIAVNVRAVVDLSARLLPGMVARRRGGLINIASTSAWQGLKWLPVYSGSK
                     AFVVTWSEAVWTGLRGTGVRCCCVSPGPVDTGFFEANRLDVAVPAWAMQSAEAVVRRA
                     LAAYQRDRCHTITFLPFRLLAWSTRLAPRSLAARLGSWYAAPQ"
     gene            3022..>3246
                     /locus_tag="VLD58_13365"
     CDS             3022..>3246
                     /locus_tag="VLD58_13365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55345.1"
                     /translation="MIWLLAGCLMASCARPPLPEASEARPNDNRRAAGQLHGDTLDLE
                     LELRSAIWRPELDAGEGLPVLAFSEPRGPAL"
BASE COUNT          458 a         1108 c         1081 g          599 t
ORIGIN      
        1 ctggatggag cgtcactctg cttctgccgt cggttccgct ggagcaggag accggcctcc
       61 gctttcgcga ggtgttccac accagcaatg gcggcatcag agtacggggg ctcaccacct
      121 tcgccggcga aactggccgg acttgattca gggtcaccgg tccaatacaa ttccggcgtc
      181 gataggggag tagcttatcc gcccccgggc ggacggctgc atcgtcaaca ctgttgcgcc
      241 tcggcgcagc acggtgcacc cgggctggtg accgcaagat caccttccag agcgagacct
      301 tcgtcggggc gcgagccccc gcgaaggctc gctctttgtt ttttctggag gatgtgatga
      361 acaacctgaa gaccgcggta ttgatggccg gactggtcgc cctgctcatg gctgcgggtc
      421 agctgctggg cgggaccaac ggcctgatcc tgggctcgat cctcgggctc gggatgaact
      481 ttgtaatgtt cttcttctcc gacaagctgg tgctccggat gtacggcgcc caggtggtga
      541 cacgggaaca ggcgcccgag ctctaccagc tggtggaccg cctgcgccag cgggccggac
      601 tgccgatgcc ggtcgtagcc gtggccccgc atgagcaacc caacgccttc gccaccggca
      661 ggagccccga gcgcgccgtg gtggcggtga ccaccgggat cctcaaggca atgccgcagg
      721 aggagctgga aggcgtgatc gcccatgagc tggcgcacgt caagaaccgg gacatgctga
      781 tcagcaccat cgcagcgggg atcgccggca tgatcggcaa cctgccgtgg ctcctgatgt
      841 tcgcgggcgg gtcgcgggac gatgacggcc gccaccccct gatggacctc gcgatggtga
      901 tcctggcgcc gctcgcggcg atgctgatcc agttcgcgat ctcgcggcag cgcgagttcg
      961 aggcggaccg ggtcggcgcc gagatcctgg gccgcccgct gccgctcgcg agggcgctcc
     1021 gccggctgga ctacatggcg cagcggatcc cgatggaggt cgcccccgcc gcggcgccgc
     1081 tggcgcaggt caatccgctc gcggcgatgg gcgggggaat cacccgctgg ttcagcaccc
     1141 atccgcccac cgaagagcgg gtggcgcggc ttgaagccat ggcgctcggt cgctgagtgg
     1201 cgcagcacac gaccgaagtc tgggttgtct tcggcctggt ggtggccggg ctcctgatcc
     1261 tcgacctggg agtcctcaac cgccggtccc atgtcctctc cacaaaggaa tcgctctcct
     1321 ggagcgccgg gatcatctcc ctggcgctcc tcttcggggc ctacctcggc tggcggagcg
     1381 gatggcattc ggggctggag ttctataccg gctatctcat cgagttgtcg ctcagcgtcg
     1441 acaacctctt cgtcttcctg ctgatcttcc agtacttcgg ggttcccgac aagcagcagc
     1501 cgcgggtcct caagtggggc atcttcgggg cgatggtcat gcgcgggatc atgatcctgg
     1561 ccggggcgct cctgctccag cggttcacct ggatcgtgta tgtcttcggc ggcatcctgg
     1621 tggtcaccgg catcaggatg ttttcgggcg gcgacacccg gatcgagccg gagaagaacc
     1681 cgctggtgcg actggcgcgg cggatctttc cggtgtgcaa cgactaccgg gaagaacatt
     1741 tcctggtgcg ggatgcccat cacaagtgga tggccacgcc gctcctgctg gtgctgctgg
     1801 tggtggagtg gagcgacctg gtcttcgcca tcgacagcat cccggcggtc ttcgcggtca
     1861 cccgcgatcc gttcatcgtc tactcgtcga acctcttcgc catcatgggg ctcagggccc
     1921 tctacttcgt gctctccggc gcgatggacc ggttccattt cctcaagccc gcggtggcgt
     1981 gcatcctcat cttcgtcggg ctcaagatgg tgggctcggc gtggttccac ctgccgaccg
     2041 tggcctcgct cgcggtgatc gtcctgacgc tgaccgccgg cgtggtgctg tcgctcctcc
     2101 gtcccaagac agccccaaag gcggcgagtc cagcggggcc atagcggatc tgggccggtc
     2161 gtcgcaactt atccgcgatg accgacctct ggtccggcac caccgccctg atcaccggcg
     2221 cctcacgcgg catcggtgcg gcgtttgccg atgccctggc ggcgcggggt gccaacctca
     2281 tcctggtcgc gcggaacgcc gggacgctcg agccggtggc ggaacgggcc cgccggctgg
     2341 gccagtcggt gcaggttctc cccgatgatc tggaggatcc cgctgcgccg gcgcgcctgg
     2401 tggaagccat cgagcggctg ggccttaccg tcgatcacct gatcaacaat gccgggatcg
     2461 gtcccaatgg cctcttccac gggcagcctc cagaaactca tctcccgacc attgcggtga
     2521 atgtccgcgc cgtggtcgat ctctccgccc gtctgcttcc cggtatggtc gcccgtcggc
     2581 ggggcggcct catcaacatc gcctccactt cggcctggca ggggctcaag tggcttccgg
     2641 tctactccgg cagcaaggct tttgtagtca catggagtga agcggtgtgg accggcctcc
     2701 gcggcaccgg ggtgcgatgc tgctgcgtct ctcccggccc agtggatacc ggcttcttcg
     2761 aggccaaccg cctggacgtc gcggtgccgg cctgggcgat gcagagcgcc gaggcggtgg
     2821 tgcgccgcgc cctggcggca taccagcggg atcgctgtca cacgatcacc ttcctgccgt
     2881 ttcgcctgct ggcctggagc acccgcctgg cgccccgttc gctggccgca cggcttggct
     2941 cctggtacgc cgccccacaa taagagcgga gttcaccgtg ccgagacccg cttgatcggc
     3001 cgcccccgac ggcctgcgcc ggtgatctgg ctcctcgccg gctgcctcat ggcgagttgc
     3061 gcccgaccgc ctcttcccga ggcttccgag gcgcgaccca acgacaatcg ccgtgcggcc
     3121 ggacagctgc atggcgacac gctggatctc gagctcgagc ttcggagcgc catctggcgc
     3181 cccgaactgg atgccggcga aggcctgccg gtgctcgcgt tttccgagcc gcgcggcccg
     3241 gccctc
//
LOCUS       DATIFF010000912         8943 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_112741, whole genome shotgun sequence.
ACCESSION   DATIFF010000912 DATIFF010000000
VERSION     DATIFF010000912.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8943
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112741"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..438)
                     /locus_tag="VLD58_13370"
     CDS             complement(<1..438)
                     /locus_tag="VLD58_13370"
                     /inference="COORDINATES: protein motif:HMM:NF024852.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HSB55346.1"
                     /translation="MTQSITRLEPRDRTGSRTWNIFVAGGTGAIGRRVLPLLVEAGHQ
                     VTAVGRTPERRGELAKLGARPADTNLFDLASVRRSLGDAEVIINLATAVPPGFRVLIP
                     RAWREMDRVRREVSANLVAAAIAGGRVERLVQEAFAPIYPDRGD"
     gene            607..1476
                     /gene="sigJ"
                     /locus_tag="VLD58_13375"
     CDS             607..1476
                     /gene="sigJ"
                     /locus_tag="VLD58_13375"
                     /inference="COORDINATES: protein motif:HMM:NF007214.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor SigJ"
                     /protein_id="HSB55347.1"
                     /translation="MEIFQRHRARLFGIAYRMLGSVQDAEDVLQEAYLRWHSSDPATL
                     RNAEAWLVAVTTRLSIDRLRRATTEREAYLGTWLPEPIASGPDTTADRHAELVSDLSV
                     AFLLMLERLAPEERAAFLLREVFDSDYAEIARVLERSEAACRQLVHRARERVRGGRPR
                     FSVPAETRERLLERLLAALERGDQRELLALVAPGATFDADGGGRVSAMRRQVQGAERI
                     VRMMLGFERKGRGLVRHSVAWVNGEPAVLTHAGENLLFTTSVETDGEQFLAFYRVLNP
                     DKLRHLVRREPDA"
     gene            complement(1483..2898)
                     /locus_tag="VLD58_13380"
     CDS             complement(1483..2898)
                     /locus_tag="VLD58_13380"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HSB55348.1"
                     /translation="MSLGSSFLEQVNQAFDKAASFTRHDTTLLANIKACKNVFYTSFP
                     IKRDDGRIEVMHAWRAEHSHHKLPTKGGIRFAPDVDAEEVQALAALMTYKCALVDVPF
                     GSAKGGIRLNAKLYSPSELERITRRYAFELVRKNFIGPGLDVPAPDMGTSSREMAWIA
                     DTYSQLKSGELDALGCVTAKPVSQGGIRGRTEATGRGVFYGVREVVSVAEDMKALGLS
                     TGLAGKRVVVQGLGNVGYHAAKFFQEGGAIIVGLAESEGAIANPKGLDIEQVMAHRKE
                     RKSLVGVPGSTALARREDALELDCDILIPAALERQITGENAPRVKAKIVVEAANGPTT
                     PEADEVLAKKGAMVIPDAYINAGGVTVSYFEWVKNLGHVRFGRMSKRFEQGAYGRLLE
                     AVEGVTGRKFTAAEADRITHGASEEDLVNSGLEETMVTAYHPIREVWKQHGGNIDMRT
                     AGMIVAIDKVAASYEQLGIFP"
     gene            complement(2987..4156)
                     /locus_tag="VLD58_13385"
     CDS             complement(2987..4156)
                     /locus_tag="VLD58_13385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55349.1"
                     /translation="MQSIGINLHLSYFRTVYGTGWETIVKPRLTALGVRHVRDAGTVE
                     ASDDWMQTVYGRMNELGSARIKFNLILKPAEGSTDYTRADHLDRLIQYAGASVESFEG
                     LNEHDLSGRTNWVTEVRSFQKAIHAKLKSDARTAGLPLFGPAMAHPVNAPRVGDLSAY
                     MNYGALHPYPGGSRPLATVSTHISYGRSINGSRPLVVTETGYHTAQHWDGDHPHIAED
                     AEARYVPRLYLDYFTAGFARTYLYELIDEGTSDTLREERFGLLRTDGTPKPAYASLRN
                     LITVLADPGPAFTPRGLSFTLSGDTTNVRRLLLAKRDGRFYLVLWHDAFSWDLATLRT
                     TPPSAKPVTLTLASAAGRIRTIAVLQSDQPAGEWTGATEVALVVPDSPLVIEITP"
     gene            complement(4417..5733)
                     /locus_tag="VLD58_13390"
     CDS             complement(4417..5733)
                     /locus_tag="VLD58_13390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55350.1"
                     /translation="MRPHPVPATASLLLSLTMVSACGDATDPALKLESQPSLVLAPAR
                     SADAFVQSIGINTHISYFRTAYGTGWATIIRPRLLALGIRHVRDAGTVVTSDGWMSTV
                     YGRMRELSDSGVKFNLILRPADGSTDYQSTAHFSRLLTYAGSSVESFEGLNEHDLSGR
                     ANWVAEVRAFQQAAWRALKADSRSAALPVYGPSMAHPIDAPLVGDLSGYLDGGALHPY
                     PGGQRPMAAVSTHVTYGRKISGTKPLMASESGYHDALLWSGSHPGVSEAAMGRYAPRL
                     ALDYFNAGLTRSYLYELIDEGTSVSEREQAFGLLHADGTPKPAYTSLKNLITLLADPG
                     PAFATSSLSYELSGDTTNVRRLLLEKRNGRFYLVLWHDAFSFDQITKTTAAPSAKKVT
                     LRLAGTASRIRTWEPLSSTTATKDSPAVASIGLTVPDSPLVVEVTP"
     gene            5857..6963
                     /locus_tag="VLD58_13395"
     CDS             5857..6963
                     /locus_tag="VLD58_13395"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HSB55351.1"
                     /translation="MMRYRRMPIEIESPEETGYASIACNLAESSMPDRVLGDLGLELD
                     FNRLVLLYGDHRGHPGLRELLAAEGGCEPGQVLLTPGAAGALFIVSTTLLSPGDHLVV
                     LRPNYATNIETPRAIGCDISFVDLTFERGWRYTAEDITRVCTPRTRLVSITAPHNPTG
                     ALLDRETLSQLARLVESRGAWLLVDETYRDLSPTAPPPLATTLSERVISVASLSKAYG
                     LPGLRLGWLITRDRGLNEQFLAAKEQMVITGAVIDEEIGYRVYRRRREALPAIAREVA
                     RGRKAVADWMAGEQRMEWVEPGGGVVAFPRIRLDAKVDVARFYARLNGEFRTWVGPGH
                     WFEQDDRYMRIGFGWPGPEELRQGLVNISRALGE"
     gene            6966..8420
                     /locus_tag="VLD58_13400"
     CDS             6966..8420
                     /locus_tag="VLD58_13400"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HSB55352.1"
                     /translation="MGDEMLARLRELERAVRPLEPGSARRRQLRKAAVARGEQFLRKV
                     KTARAFHEGDEASGLMVAPIGERGISIEQALDLIDECVVRPGGLPASGGHLAYIPGSA
                     VYHSALADYLAAVTNKYAGISFTGPGPVRMEQMLVRWTADLVGYPAGAGGHLASGGSI
                     ATLAALATARDAHRLKGADLPSCVAYLTTQAHHCIEKALRLAGLAEVQLRYVEMDERY
                     RMRPEALAQAIAADRGEGRKPWIVIAAAGTTDTGAVDPLDAIGVIAKREQCWYHVDAA
                     YGGYFLLTQHGRTLLKGIERSDSTVLDPHKGLFIPFGVGIVLVRDVRPLAETHSYTGH
                     YMQDALQDQHEISPADLSPELSKHFRALRMWLPLVLEGTRPFAAALEEKLLLARYFRE
                     RVGRLGFETGPEPDLSIVTFRWAPPGVTLERANQLNQAIVDGIRRDGRVFLSSTMLDG
                     RFTIRLAVLNFRTHRASIDLALRVLEEQIAALSD"
     gene            complement(8426..>8943)
                     /locus_tag="VLD58_13405"
     CDS             complement(8426..>8943)
                     /locus_tag="VLD58_13405"
                     /inference="COORDINATES: protein motif:HMM:NF042530.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF6596 domain-containing protein"
                     /protein_id="HSB55353.1"
                     /translation="SESRRPARSAGDGELVLLEDQDRSLWNRELIAEGTGLVERALGS
                     ARAGRYALQAAIAAVHSEAATPAATDWAQIVGLYELLLRQDPSPVIGLNRAVAVSMRD
                     GPAAGLALVDEIIATGELDDYHLAHSARAELCRRLGQVEAARASYQRALALVRQEPER
                     RFLRRRLASLT"
BASE COUNT         1370 a         2946 c         3138 g         1489 t
ORIGIN      
        1 gtcaccccga tcgggataga tcggcgcgaa cgcttcctgc accagccgct ccaccctgcc
       61 gccggcaatc gcggctgcga cgaggttggc cgagacttcc cgcctgaccc ggtccatttc
      121 ccgccaggcc cgcgggatca acacccggaa ccccggtggg accgcggtcg cgaggttgat
      181 gatgacctcg gcatccccca gcgaccgcct gaccgaggca aggtcgaaca ggttggtatc
      241 ggccgggcgg gcgccgagct tcgcgagttc cccgcgccgc tccggggtcc gccccaccgc
      301 ggtgacctgg tgccccgcct cgacgagcag tggcagcacc cttcgcccga tggctccggt
      361 gcccccggcc acaaagatgt tccaggtgcg actgccggtc cggtcgcggg gttcgagtcg
      421 cgtgatggat tgtgtcatgt gccgatctcc tgagcctgtg gtccgtctca cccgcctgct
      481 gagcaagacg gacgagcccg gcagctgtga ccgctgcctg gttgtcacac ccgcgcggtt
      541 cgcccgtcta ttgtgcatga acgccggggc ggtcggatga gttcggaata cagacaggat
      601 caggggatgg aaatattcca gcggcaccgg gcgcggttgt tcgggatcgc gtaccggatg
      661 ctggggtcgg tgcaggatgc agaggatgtc ctccaggagg cctacctccg ctggcattcc
      721 agcgaccctg cgacgttgag gaatgcggag gcctggctgg tggcggttac cacccgcctc
      781 agtatcgacc ggctgcgccg cgccaccacc gagcgggaag cctatctcgg cacctggctg
      841 ccggagccga tcgcgagcgg gcccgacacg accgcggacc ggcacgccga actcgtctcc
      901 gacctctcgg tggcattcct gctgatgctc gaacgcctcg cgccggagga gcgggccgcc
      961 ttcctgctgc gcgaggtgtt cgacagcgac tacgccgaga ttgcgcgggt gctggagcgg
     1021 agtgaggcgg cctgccggca gctggtgcac agggcacggg agcgggtccg gggagggcgg
     1081 ccccgcttca gcgtgccggc ggagacccgg gagcgactgc tcgagcgcct gcttgccgcg
     1141 ctggaacggg gagaccagcg ggaactgctg gcgctggtgg caccgggggc caccttcgac
     1201 gccgacgggg gcgggagggt gtcggccatg cggaggcagg tgcagggcgc cgagcggatc
     1261 gtgcggatga tgctgggctt cgaacggaag ggccgggggc tggtccgcca cagcgtggca
     1321 tgggtgaatg gcgaacccgc cgtgctcacc catgccggag aaaacctcct gttcaccacc
     1381 tcggtggaaa ccgacgggga acagtttctc gccttctacc gggtgctcaa cccggacaag
     1441 ctgcggcacc tggtccggcg ggagccggac gcctgattcg gctcagggga agatgccgag
     1501 ctgttcgtag ctggcggcga ccttgtcgat cgccacgatc atccccgcgg tccgcatgtc
     1561 gatgttgcca ccgtgctgtt tccagacctc gcggatcggg tggtaggcgg tgaccatggt
     1621 ctcttccagt ccggagttga ccaggtcttc ctcgctggcg ccgtgggtga tccggtcggc
     1681 ttcggcggcc gtgaacttgc ggccggttac cccttccacc gcctcgagga gcctgccgta
     1741 ggcgccctgc tcgaaccgct tcgacatccg gccgaagcgc acgtggccca ggttcttcac
     1801 ccactcgaag tagctcaccg tcacgccccc ggcattgatg taggcgtcgg gaatcaccat
     1861 cgcgcccttt ttcgccagga cttcgtcggc ctcgggagtg gtcggcccgt tggcggcttc
     1921 taccacgatc ttcgccttga cccggggcgc gttctcgccg gtgatctgcc gctcgagcgc
     1981 ggcgggaatc aggatgtcgc agtcgagctc cagcgcatct tcccgccggg ccagcgcggt
     2041 gctgccggga accccgacca ggctcttccg ctccttccgg tgggccatga cctgctcgat
     2101 gtcgaggccc ttcgggttgg cgatcgcgcc ctccgactcc gccagcccga cgatgatggc
     2161 tcccccttcc tggaagaatt tggccgcgtg gtatccgacg ttgccgagtc cctgcaccac
     2221 cacccgcttc ccggcgagcc cggtagagag gcccaatgcc ttcatgtcct cggccaccga
     2281 gaccacttca cgcacgccgt agaacactcc gcgcccggtg gcttcggtgc ggccccggat
     2341 gccgccctgg ctcaccggtt tggcggtgac gcagcccagc gcgtcgagct cgccgctctt
     2401 gagctggctg taggtgtcgg cgatccaggc catttcccgc gaactggtgc ccatgtcggg
     2461 cgcggggaca tcgaggccgg ggccgatgaa gttcttgcgg accagctcga aggcgtagcg
     2521 gcgggtgatc cgctccagct cggaggggga gtacagcttg gcgttgagcc ggatcccgcc
     2581 cttggcgctg ccgaaaggca cgtccaccag ggcgcacttg taggtcatca gcgccgcgag
     2641 cgcctggacc tcttcggcgt cgacatcggg cgcaaagcgg atcccgccct tggtcgggag
     2701 cttatggtga ctgtgctcgg cgcgccaggc atgcatcacc tcgatgcggc cgtcatcgcg
     2761 cttgatgggg aagctggtgt agaagacatt cttgcacgcc ttgatgttgg cgagcagcgt
     2821 cgtatcatgc cgcgtgaagc tggcggcctt gtcgaaggcc tggttgacct gctcgaggaa
     2881 actcgaaccg agggacatgc ccatctcctg aatctggcgg gacaggatcg cgagggtccg
     2941 ggagtgatac cccggcccgc ggtcctgcgc cagtgggccg cccgattcag ggggtaatct
     3001 cgatgacgag ggggctgtcc gggacgacca gggccacctc cgtggccccg gtccactccc
     3061 cggctggctg atccgactgg agcaccgcga tcgtgcggat ccggcccgcc gcgctggcaa
     3121 gcgtgagggt caccggcttg gcgctgggcg gggtggtgcg cagggtcgcg aggtcccacg
     3181 agaaggcgtc gtgccagagg accaggtaga agcgtccatc ccgcttcgcg aggagcaggc
     3241 gccgcacgtt ggtggtgtcg ccgctcaggg tgaagctcag cccacgcggg gtgaaggcag
     3301 gtcccgggtc ggccaacacg gtgatgagat tccggagcga agcataggcc ggcttgggcg
     3361 tgccgtcggt ccggaggagc ccgaaccgtt cttcccgcag ggtgtcgctg gttccctcgt
     3421 cgatcagctc gtacaggtaa gtccgggcaa agccggccgt gaagtagtcg agatagagcc
     3481 gcggcacgta gcgggcctcg gcgtcttcgg cgatgtgggg atggtcgccg tcccagtgct
     3541 gagcggtgtg atagccggtc tcggtgacca ccagcggccg gcttccgttg atgctccggc
     3601 cgtaggagat gtgggtcgac acggtcgcga gcggccggga gccgccggga tagggatgca
     3661 gcgccccgta gttcatgtag gcgctcaagt ccccgactct gggcgcattg accggatggg
     3721 ccatcgccgg accgaagagg ggaaggccgg cggtgcgggc atcgctcttg agcttggcgt
     3781 gaatcgcctt ctgaaagctg cgcacctccg tcacccagtt ggtccggccg gagagatcgt
     3841 gttcgttgag gccctcgaag ctctccaccg aggcgccggc atactggatc agccggtcga
     3901 ggtggtcggc ccgggtgtag tcggtgctac cctccgccgg cttgaggatg aggttgaact
     3961 tgatccgggc ggagcccagc tcgttcatgc ggccgtagac ggtctgcatc cagtcgtcgc
     4021 tggcttccac cgttcctgcg tcccgcacgt ggcgaacacc cagcgcggtg aggcggggct
     4081 tcacgatggt ctcccacccc gttccgtaga cggtccggaa gtaactcagg tggagattga
     4141 tgccgatcga ctgcacgaac gcatcggagc tctttgcggc cagttctaca ccgggcggcg
     4201 ggcctgacgc ctggccggag gcatcggtcg gggcgggggc ggcacaggag atatgcacag
     4261 agagagacgc cccgaggagc actcggcctt gccacttgag atgtaagcgc atgcgcgaag
     4321 ctaccaggag atacctccgg aggacggtgc ccggggtcac taccgccgga gacatgaagt
     4381 gttacgcgac gagcaagtag gtttttcgcg caggcgctac ggagtcactt cgacgaccag
     4441 cgggctgtcc ggcaccgtga ggccgatcga ggcgacggcg gggctatcct tggtcgcggt
     4501 ggtggagctg agcggctccc aggtgcggat ccgggacgcg gtgccggcca gccggagggt
     4561 caccttcttg gcgctgggcg ccgccgtggt cttcgtgatc tggtcgaacg agaaggcatc
     4621 atgccagagc accaggtaga agcgcccgtt ccgcttctcg agcagcagcc ggcggacgtt
     4681 ggtggtgtcg ccgctcagct cgtaactcag gctcgaggtg gcgaacgccg ggcccgggtc
     4741 ggcgagcagg gtgatcaggt tcttgaggga ggtataggct ggcttgggtg tgccgtcggc
     4801 atggagcagc ccgaacgcct gctcccgctc gctcaccgat gttccctcgt cgatgagctc
     4861 gtagaggtag cttcgggtga gaccggcatt gaaatagtcc agggccaggc gaggtgcgta
     4921 gcgtcccatc gccgcctcgc tcacgcccgg atgggagccg ctccagagca gggcatcgtg
     4981 atagccgctt tccgaggcca tcagcggctt ggtcccgctg atcttgcggc cgtaggtaac
     5041 atgggtcgag acggcggcca tcggccgctg cccgcccggg tacggatgca aggcgccgcc
     5101 gtcgagatag ccgctcaggt cgcccaccag cggcgcgtcg atggggtggg ccatgctggg
     5161 tccgtacacc ggcagggcgg cgctccggct gtcggccttg agtgcccgcc aggccgcctg
     5221 ctgaaaggcg cggacctcgg ccacccagtt ggcgcggccg gagaggtcgt gctcgttgag
     5281 tccctcgaag ctctccaccg aggagccggc ataggtgagc agccggctga aatgcgcggt
     5341 gctctggtag tcggtgctgc cgtccgccgg ccggaggatc agattgaact tcaccccgga
     5401 gtccgacagc tcccgcatcc gtccgtacac cgtcgacatc cagccatcgc tggtgacgac
     5461 cgtgccggca tcgcgcacat gccggatgcc gagcgcgagc agcctggggc ggatgatggt
     5521 cgcccacccg gtgccgtagg cggtgcggaa gtagctgatg tgggtgttga tcccgatcga
     5581 ctggacgaag gcgtcggcgc tccgggccgg cgccagcacc aatgacggct gggactcgag
     5641 cttgagtgcg gggtcggttg cgtcgccgca ggcgctcacc atggtgagcg aaagcagcag
     5701 ggatgcggta gcagggacag ggtgtggtct catgccggta ctatcgaccg ctccctctca
     5761 cggatgagag atgatttcag gacaagatat ggtagctcgc cagtgtggta gtattccgcg
     5821 tccttactgt gcgggaatgg tccagggaaa ggtcggatga tgcgctaccg ccggatgccg
     5881 atcgagatcg agtcccccga ggaaaccggg tacgccagca tcgcgtgcaa cctggccgaa
     5941 agctcgatgc ccgaccgggt gctcggggac ctgggcctcg agctcgactt caaccggctg
     6001 gtgctgctct atggagatca ccgggggcat cccggccttc gcgagctgct tgcagcggag
     6061 ggtggctgtg agcctggtca ggtactgctg acgccgggtg cggccggcgc cctcttcatc
     6121 gtctcgacca cgctgctcag ccctggcgat cacctggtgg tgctccggcc caactacgcc
     6181 accaacatcg agacgccccg cgccatcggt tgcgacatct cgttcgtcga tctcaccttc
     6241 gagcgcggct ggcgctacac cgccgaagac atcacgcgcg tgtgcactcc gcggaccagg
     6301 ctggtgagca tcaccgcgcc ccacaatccc accggagcgt tgcttgaccg cgagaccctg
     6361 agccagctgg cgcgcctggt cgagtcacga ggagcctggc tgctggtcga cgagacgtat
     6421 cgcgatcttt cgcccacggc gcctccgccc ctggctacca ccctgagcga acgggtcatc
     6481 agcgtcgcct ccctctccaa ggcctatggc cttccgggcc tcagactcgg ctggctcatt
     6541 acccgtgacc gtggcctcaa tgagcagttc ctcgcggcca aggagcagat ggtgattacc
     6601 ggggcggtga tcgacgagga gatcgggtat cgggtctacc ggcgccggcg ggaggcattg
     6661 cctgcgatcg cccgggaggt ggctcgaggc cggaaggctg tggccgactg gatggcaggc
     6721 gagcagagga tggagtgggt ggaaccgggt ggaggcgtgg tggcgtttcc ccgcatccgg
     6781 ctcgatgcga aggtcgatgt ggcacgcttc tatgcccggc tcaacggcga gttcaggacc
     6841 tgggtcggtc cggggcactg gttcgagcag gatgaccgct acatgcgcat cgggttcggg
     6901 tggcccggcc cggaggaact gcggcagggt ctcgtgaaca tttcacgcgc gctcggggaa
     6961 tgacgatggg cgatgagatg ctggctcggc tccgtgaact ggagcgtgcg gtgcggcccc
     7021 tcgagcccgg cagtgcccgg cggcgccagc tccgcaaggc cgcggtggcg cggggcgagc
     7081 aattcctccg caaggtgaag acggcgaggg ccttccatga gggcgacgag gcgagcgggc
     7141 tgatggtggc ccctatcggg gaacggggca tttccatcga gcaggcgctc gacctgatcg
     7201 acgagtgcgt cgtccgcccc ggcggcctgc cggccagcgg cggccacctg gcgtatatcc
     7261 cgggctccgc cgtctatcac tccgcgctgg ctgactacct cgcggccgtc accaacaagt
     7321 atgccggcat ctcgttcacc ggacccggcc cggtgcggat ggagcagatg ctggtgcgct
     7381 ggaccgccga cctggtgggt tacccggccg gagcgggcgg gcaccttgcc tcgggcggaa
     7441 gcattgccac actcgcggca ctggccacgg cccgggatgc gcaccgcctc aagggcgccg
     7501 acctccccag ctgcgtcgcc tacctgacca cgcaggcgca ccactgcatc gaaaaggcgc
     7561 tccggctcgc gggcctcgcc gaggtgcagc tccgctacgt ggaaatggac gagcgctatc
     7621 gcatgcgccc cgaggcgctg gcccaggcga tcgccgccga ccgcggtgag gggaggaaac
     7681 cctggatcgt gatcgccgcg gcaggcacca ccgacaccgg cgcggtcgat ccgctggacg
     7741 ccatcggggt gatcgcgaag cgggagcagt gctggtatca cgtcgacgcg gcctacggcg
     7801 ggtacttcct gctgacccag cacggccgca cgctgctcaa ggggattgaa cggagcgact
     7861 cgaccgtact ggacccccac aagggactgt tcattccctt cggggtgggc attgtgctgg
     7921 tgcgcgatgt ccggccgctg gccgagacgc acagctacac cgggcactac atgcaggacg
     7981 cactccagga ccagcacgag atctccccgg ccgatctttc tcccgagctg tccaagcatt
     8041 tccgggcgct ccgcatgtgg ctgccgctgg tgctcgaagg cacccgtccc ttcgcggcgg
     8101 cgctggagga gaagctcctg ctggcgcgct atttccggga gcgggtgggg cggctcgggt
     8161 tcgagaccgg tcccgaaccc gatctctcga tcgtgacctt ccggtgggcg cccccgggtg
     8221 tgacgctcga acgggccaac cagctcaacc aggcgattgt cgatggaatc cggcgggacg
     8281 ggcgggtctt cctctcatcg accatgctcg acggccggtt caccatccgg ctggcggtgc
     8341 tcaacttccg cacccatcgc gcctcgatcg acctggcact ccgggtgctg gaggaacaga
     8401 tcgccgcact cagcgactga ccccgtcagg tcaacgaagc cagccgccgg cgcaggaagc
     8461 ggcgttccgg ttcctgccgc accagcgcca gcgcccgctg gtagctcgcc cgcgccgcct
     8521 cgacctgtcc cagccggcgg cacaactccg cccgcgcgga gtgggccagg tgatagtcgt
     8581 cgagctcccc ggtggcgatg atctcgtcga ccagcgcgag tcccgcggcc ggcccatccc
     8641 gcatgctcac ggccaccgcg cgattgagcc cgatgaccgg cgagggatcc tgccggagca
     8701 gcagctcgta caaacccacg atctgggccc agtcggtggc cgcgggagta gccgcctccg
     8761 aatgcaccgc ggcaatcgcc gcctggagag cgtagcgacc cgctcgcgcc gatccgagcg
     8821 cccgttcgac cagtcccgtc ccctccgcga tcagctcccg gttccacagg gaacggtcct
     8881 ggtcttccag caggaccagc tcgccatcgc cggcgctccg ggctggccgt ctcgactccg
     8941 aga
//
LOCUS       DATIFF010000913         3015 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1804713, whole genome shotgun sequence.
ACCESSION   DATIFF010000913 DATIFF010000000
VERSION     DATIFF010000913.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3015
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1804713"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..507
                     /locus_tag="VLD58_13410"
     CDS             <1..507
                     /locus_tag="VLD58_13410"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSB55354.1"
                     /translation="NVDTASRRLNQVAFGYRAYSSSDIASESSQTFKVVSRFHRAIAV
                     ISVMASAIFLLCIMLLKVEERRRDAAVMRFTGISARTIFGALLLEAILVAALGSIMGV
                     GLAAAASATTNAYYQRFFDTALVFSVITGGIVRFSVLLSLGLGLAAGALAAWRLASTR
                     PLVLWGRG"
     gene            504..1685
                     /locus_tag="VLD58_13415"
     CDS             504..1685
                     /locus_tag="VLD58_13415"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSB55355.1"
                     /translation="MTALRNLLRHPIRSGLALAGIAITTAMLLDMVLLAGGIERSFER
                     MLMVRGFQIRISPKGTLPFDTEATIPGVTSLLQAIRSDSAVDRAGPMVGASVYSRRGD
                     TLITLFGYGIEAGAQGVYQVEEGTDLTPDDRDGLLISAPAAAQLGARIGDTVTLVGRL
                     DPQAAAGAIEHRLVVRARVKWLYDYRGQASVGTSLPVMQDLVRLRTEDRVSAVLVRVK
                     RESEVEQVTRDLRARFPMLEVNSVADMVVHFRQRLVYFRQLSYILGSISLVVTVLLVS
                     TLMTITVNERLGEIATLRAIGISRWSILKGVMLEGATLTIAGGLLGSALGTVTAKFLD
                     RILTSFPGLPAAISFFVPYTQSLVLAAIVLVITGVAAGVYPALLAARAPIAATLRTEA
                     T"
     gene            1682..2365
                     /locus_tag="VLD58_13420"
     CDS             1682..2365
                     /locus_tag="VLD58_13420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB55356.1"
                     /translation="MSVVARARELRKDYPMNGETVHALRGVSLDIHQGDYAAIVGPSG
                     CGKSTLLQLLGGIDTPSSGSVEIMGQHLEAMNDRDLTRLRLTRIGFVFQRFHLLPVLS
                     AEENIELPLAEAGMGRAERKARARELLGYVGLAGRGSHRATQLSGGEMQRVAIARALA
                     NRPALILADEPTGELDAKTGRSILDLFGRLVGDGVTLVVVTHDEKLAGEAGRVVHMLD
                     GEIVDDVRR"
     gene            2365..>3015
                     /locus_tag="VLD58_13425"
     CDS             2365..>3015
                     /locus_tag="VLD58_13425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55357.1"
                     /translation="MLTILAFRQLFVNKGRSLLLLLGYGLGVGVMIVLLSVGQAMVDQ
                     SKDVSLIGGGELTVLPQGIDIEAMRTGGLSGLFFGIDRARFLTRQLLGGERNAALVRT
                     VSPVIENKLIYLRKRGGEPVAVRAGAEIPSRASAVGAGLNVIAGEWNDSPADSQWVAP
                     TAEQLYHELDRFHLPPTADSSWGEWHYFNFAASRDEWWYVTYLIGGSIPNGRWGGRL"
BASE COUNT          431 a         1002 c         1077 g          505 t
ORIGIN      
        1 aacgttgata ctgcgagccg gcggctcaac caggtcgcct tcggttaccg ggcctactcc
       61 tcaagcgaca ttgccagcga aagctcccag accttcaagg tggtgagccg ctttcaccgc
      121 gccattgccg tcatctcggt catggcgagc gcgatcttcc tgctctgcat catgctcctc
      181 aaggttgaag agcgccggcg cgacgccgcg gtcatgcggt tcaccgggat cagcgcccgc
      241 acaatattcg gcgccctcct cctcgaggcg atcctggtcg cggcactggg ctcgatcatg
      301 ggtgtcgggc tggccgccgc ggcgagcgcc acgaccaacg cctactacca gcgcttcttc
      361 gacaccgcgc tggtcttctc ggtgatcacc ggcgggatcg tgcggttcag cgtgctgctc
      421 tcgctcgggc tgggcctcgc ggccggggcg ctggcggcct ggcgtctggc gagcacccgg
      481 ccgctggtgt tgtgggggcg gggatgaccg cgctcaggaa cctcctccgc cacccgatcc
      541 gctcgggcct cgcgctcgcg ggcatcgcga tcaccacggc gatgctgctc gacatggtgc
      601 tgctggccgg cggcatcgaa cgctccttcg agcggatgct gatggtgcgc ggcttccaga
      661 tacggatctc gcccaagggc acgctgccgt tcgataccga ggcgaccatt ccgggggtga
      721 cctcgctgct ccaggccatc cggtccgaca gcgccgtcga ccgggccggg ccgatggtcg
      781 gcgcctcggt ctacagccgc cggggcgaca ccctgatcac cctcttcggc tacggcatcg
      841 aggccggggc gcaaggcgtc taccaggtcg aggaagggac ggacctgaca ccggacgatc
      901 gcgacgggct cctcatcagc gcgccggcgg cggcccaact gggcgccagg ataggcgaca
      961 cggtcaccct ggtgggccgg ctcgatccgc aggcggccgc gggggcgatc gagcatcggc
     1021 tggtggtgcg ggcgcgggtg aagtggctct atgactaccg gggccaggcc tcggtcggga
     1081 cgtcgctccc cgtgatgcag gacctggtcc ggctccggac ggaggatcgg gtgtcggcgg
     1141 tgctggtgcg ggtgaagcgg gagtcggagg tcgagcaggt cacccgcgac ctccgggccc
     1201 gcttcccgat gctcgaggtg aacagcgtcg ccgacatggt ggtgcacttc cggcagcggc
     1261 tggtctactt ccgccagctc tcctacatcc tcggcagcat cagcctggtg gtgacggtgc
     1321 tgctggtgtc gaccctgatg accatcacgg tgaacgagcg cctcggcgag atcgcgacgc
     1381 tccgcgccat cggcatctcg cgctggagca tcctcaaggg cgtgatgctc gaaggggcca
     1441 cgctcaccat cgcgggcggg ctcctggggt cggcgctcgg cactgtgacc gcgaagttcc
     1501 tcgaccggat cctcacctcc ttcccgggtc tcccggctgc catctccttc ttcgtgccct
     1561 atacccagag tctggtcctc gcggccatcg tgctggtgat caccggggtg gccgcgggcg
     1621 tgtatcccgc gctcctcgcg gcccgcgccc cgatcgcggc gacgctccgg acggaggcca
     1681 catgagcgtg gtcgccaggg cccgcgagct ccgcaaggac tatccgatga atggcgagac
     1741 ggtgcacgcg cttcggggcg tgtcactcga cattcaccag ggcgactacg ccgccatcgt
     1801 cggcccctcg gggtgcggca agtcgaccct gctccagctg ctgggcggga tcgatacgcc
     1861 gtcgagcggc agcgtcgaga tcatgggcca gcatctcgag gcgatgaacg accgggacct
     1921 gacccggctc cggctcaccc ggatcggctt cgtcttccag cgctttcacc tgctgccggt
     1981 gctgtcggcc gaggagaaca tcgagctgcc gctggcggag gcggggatgg gccgggccga
     2041 gcggaaggcg agggcgcgcg agctgctggg gtatgtggga ttggcggggc gtgggagtca
     2101 ccgcgctacc cagttgtcag gcggagaaat gcagcgggta gcgatcgcgc gggcgctggc
     2161 gaaccgcccc gcgctcatcc tggccgacga accgaccggt gagctcgacg cgaagaccgg
     2221 gcgcagtatc ctcgacctct tcgggcggct ggtgggagac ggcgtcaccc tggtggtggt
     2281 aacccacgac gagaagctgg cgggcgaggc cgggcgggtg gtgcacatgc tggatggcga
     2341 gatcgtggac gacgtgcggc gctgatgctc accatcctgg ccttccgtca gctcttcgtg
     2401 aacaaggggc gatcgctcct gctcctgctc ggctacggcc tgggcgtggg ggtgatgatc
     2461 gtgctgctct cggtggggca ggcgatggtc gaccagtcga aggatgtgtc gctcatcggg
     2521 ggcggcgagc tgaccgtgct cccgcagggg atcgacatcg aggcgatgcg gaccggcgga
     2581 ctgagcgggc tcttcttcgg catcgaccgg gcccgcttcc tcacccggca actcctgggt
     2641 ggggaacgca acgccgctct ggtgcgcacc gtgtcgccgg tgatcgagaa caagctgatc
     2701 tacctgcgga agcgcggcgg tgagccggtc gcggtgcggg ccggagccga gattccgagt
     2761 cgcgccagcg cggtaggcgc ggggctcaat gtgatcgcgg gagaatggaa tgactcgccg
     2821 gccgactcgc agtgggtcgc ccccactgct gagcaactct accacgagct cgaccgcttt
     2881 catctgccgc ccactgccga ctcgagctgg ggcgagtggc actacttcaa tttcgccgcc
     2941 tcccgggacg agtggtggta cgtcacctat ctcatcggcg gatcgatacc caacggaagg
     3001 tggggcggcc ggctc
//
LOCUS       DATIFF010000914         1711 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_574630, whole genome shotgun sequence.
ACCESSION   DATIFF010000914 DATIFF010000000
VERSION     DATIFF010000914.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_574630"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1042)
                     /locus_tag="VLD58_13430"
     CDS             complement(<1..1042)
                     /locus_tag="VLD58_13430"
                     /inference="COORDINATES: protein motif:HMM:NF024181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /protein_id="HSB55358.1"
                     /translation="MRTLQKALLGLGLALGAAGCSNYLSAPDVTNDPTKVTVLTKPGP
                     LYIAIQEAGPPQREGQLARLAAEYTQQVAGFSRQQIGFDTYNAKPSDVDPYFTAIYGT
                     NNTLNGGGGLLDIHKMQQLGHKVNDSLYIGIGKVYEALYIGLAADMFGDIPYREAADS
                     TILAPHFDPQLQIYADLQTQLDSAITIFLTATGPTNAGGSADGSELIYGGRSAAQLQA
                     VYTAVAHSLKARLYLHTAETDPTAYAKALAEVPLGISDPVDDFLWFHDGTPNGASIWW
                     QFMSARGDIAPAAAFLAVAGRLAAVDDSSRIQFYFTPALDTVKADTLPDGSEKPLGFF
                     GFRPGGTVKMPTA"
     gene            complement(1072..>1711)
                     /locus_tag="VLD58_13435"
     CDS             complement(1072..>1711)
                     /locus_tag="VLD58_13435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55359.1"
                     /translation="IGASGYPELDFDNTYILADPNPDWTGSVRTNFRIGKLSLGGLLD
                     VRAGGVAYNGTKGALQHFGVAQITADTRNAAPVVFGTGYYPANADPTNPGHAVAGPGV
                     GLAVPLDQGYWQNIGSVFNGNDAAFLEPGHFVKLREISLGYTLDQPWVSRSLGFSSIE
                     LRVAGRNLTSWNDYTGVDPETSLLGAVTPVQGLNYFNNPQSRSWSFSLTLNR"
BASE COUNT          255 a          536 c          629 g          291 t
ORIGIN      
        1 aggcggttgg catcttgacg gtcccgcctg gccggaagcc gaagaagccg aggggcttct
       61 ccgagccgtc gggcaacgtg tccgccttga cggtatccag ggcgggggtg aaatagaact
      121 ggatgcggga gctgtcgtct accgccgcca gccgtcccgc cacggccagg aacgcggccg
      181 cgggggcgat gtcgccgcgg gccgacatga actgccacca gatgctggcg ccgttcggcg
      241 tgccgtcgtg gaaccagagg aagtcgtcga ccggatcgct gatcccgagc gggacctccg
      301 cgagcgcctt ggcgtaggcg gtcggatcgg tctcggccgt gtgcaggtag agccgggcct
      361 tgagcgagtg cgccacggcg gtgtagaccg cctgcagctg ggccgcgctc cggccgccgt
      421 agatcagctc actgccgtcc gcgctgccgc cggcgttggt ggggccggtg gccgtgagga
      481 agatggtgat cgccgaatcg agctgcgtct gcaggtcggc gtagatctgc agctgcggat
      541 cgaagtgcgg cgccaggatg gtcgagtcgg ccgcctcgcg gtaggggatg tccccgaaca
      601 tgtcggccgc gaggccgatg tacagcgcct cgtagacctt cccgatcccg atgtagagcg
      661 agtcgttcac cttgtgcccg agctgctgca tcttgtggat gtcgagcagc ccgccgccgc
      721 cgttgagcgt gttgttcgtg ccgtaaatgg cggtgaagta cggatccacg tcgctcggct
      781 tggcgttgta ggtgtcgaac ccgatctgct gccggctaaa gccggcgacc tgctgggtgt
      841 actcagcggc caaccgcgcg agctggcctt cgcgctgcgg cggtcccgcc tcctgaatgg
      901 cgatatagag cggcccgggt ttcgtgagca ccgtgacctt ggtcgggtca ttggtcacgt
      961 ccggagccga gaggtagttg ctgcagccgg ccgccccaag ggcgaggccg aggccgagca
     1021 gcgccttctg caacgtgcgc atgggctcag ttctcctggt aggcgccggc atcagcggtt
     1081 gagggtgagc gagaaggacc acgaccggct ctgggggtta ttgaagtagt tgagcccctg
     1141 gaccggcgtg acggcgccca agagcgacgt ctccggatcc acaccggtgt aatcgttcca
     1201 gctcgtcaga ttgcgtccgg ccacccggag ctcgatggag ctgaacccga gcgagcggct
     1261 gacccacggc tggtcgagcg tgtacccgag ggagatctcg cgcagcttca cgaaatgtcc
     1321 cggctcgagg aacgccgcgt cgttgccgtt gaacacgctg ccgatgttct gccagtagcc
     1381 ctgatccagc ggcacggcca gcccgacccc cggcccggcg accgcgtggc ccgggttggt
     1441 gggatccgcg ttcgcggggt aatagccggt cccgaagacc accggggccg cgttgcgggt
     1501 gtcggccgtg atctgcgcga cgccgaagtg ctggagcgcg cccttggtgc cgttgtaggc
     1561 cacgccaccg gcgcggacgt cgagcagccc gcccagcgag agcttcccga tccggaagtt
     1621 ggtccggacc gagccggtcc agtcggggtt cgggtcggcg aggatgtagg tgttgtcgaa
     1681 gtccagctcg ggatagccgc tggcgccgat g
//
LOCUS       DATIFF010000915         4989 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_574689, whole genome shotgun sequence.
ACCESSION   DATIFF010000915 DATIFF010000000
VERSION     DATIFF010000915.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4989)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4989)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4989
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_574689"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            105..1001
                     /locus_tag="VLD58_13440"
     CDS             105..1001
                     /locus_tag="VLD58_13440"
                     /inference="COORDINATES: protein motif:HMM:NF021507.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiester glycosidase family protein"
                     /protein_id="HSB55360.1"
                     /translation="MRTRRHLAALLTLFAGGSAAPVVPVTFDTGQGPLRLAQSEPGEL
                     AWTAAWERGAGGLEWTELRMRGRGEVRRTRVVVARVDPGSFVISLENGMAPGGLMPVW
                     TLDRAPAGAALAFNAGMFANDGAWGWVVHRGQEYRAPRRGPLAAAVIVDRAGRVRLAG
                     DAEVDSLRAANRLGGVVEAFQSYPALLREGELPNLLEVTSPDIDLEHRDARLALGVDR
                     EGRLLLALTRFDALGPSLGSVPFGLTIPEMARVMRALGANSAVALDGGISAQLLLRDG
                     GGEVHRWEGFRPVPLGMSVVPK"
     gene            complement(1092..2072)
                     /locus_tag="VLD58_13445"
     CDS             complement(1092..2072)
                     /locus_tag="VLD58_13445"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing response regulator"
                     /protein_id="HSB55361.1"
                     /translation="MPETEVTGSSGLPELPGHRHRRIVMVVEDNPDDALLLSVLLEEL
                     PGDPCRLLRASSLEQALQLTGQVRPEVILLDLNLPDTTGIESLTRLHEHCPEIPIIVL
                     TGDDDERLAMAAVRSGAQDYLVKGRVDSWTLIRTIRHSHERHRLMTELEIARQQEAHR
                     ATHDALTGLPNRVLYFDRLSHAIAQATRRRERLAVLYLDLDGFKPVNDGHGHATGDEV
                     LIQVSQRLSNGVRRSDTLARLGGDEFAVLFEKIPERGVAESLVLSLRMLFKDPIQVGE
                     HAFPIGFSAGLAIFPDDGRNPDGLLSVADAAMYREKSSRPARRAVELRVI"
     gene            complement(2087..2533)
                     /locus_tag="VLD58_13450"
     CDS             complement(2087..2533)
                     /locus_tag="VLD58_13450"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSB55362.1"
                     /translation="MNLETMIRRPIDILVVDDSEDAVVLTREAFEATEALRIAHVAGD
                     GMEALRYLRHEAPFERVRRPGLILLDLNMPGLNGIETLRAIKRDPALRHIPVIVLTVS
                     DQPSDIRAAYAEGAAGYVRKPDDFEAFAGVVRELQDYWTLVCRLPS"
     gene            complement(2530..4740)
                     /locus_tag="VLD58_13455"
     CDS             complement(2530..4740)
                     /locus_tag="VLD58_13455"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSB55363.1"
                     /translation="MLLLGGAILARCRRALGARRFGMAAGALAALIGLLTLVEDFVHV
                     DLGIDTLLAPDRGTDSLFPGRMSLFMAVGTVLLGTGAALASRPRKRGRLDSTERLALG
                     GLLLGLGTLLGHIYHTRFLVQLDPSYGSIAPGSTAGLIAGSLALLLLHPTGPLMSLVS
                     STSFAGREARRLGFMYAPLLLAVAALLTSWESAGAITDGEASALRTLVFLLAMLAFGW
                     RAFRDLDRAEFSLNRALKSGEKIRTELQAEVMQRTTALTATSLKAEAARAQLQAVMES
                     APDLVAAIDSDFNYVVANRAYMAAFRDDHASGAQRRAWERALAGERFTSEDELAQPDG
                     SACIYERSFGPVKDGRGHVIGAVGLLRNITARRALEHEASASRRLLETVLHHSPAGVF
                     VKEANGRYLLANQVFGRMTGLAPTAIPGCTDEDLFVHTVAEQARTSDLWALEHGAPHE
                     REVVLDVPDGGQRSFLVSKAPMPDGQGGWWICGVATDITERKLAEAALQRSELDLAGR
                     NKDLETLLHVISHDLKEPLRSIESFSSLLTTRHAGQLDPKGLDFLERVVKATGRLGQL
                     LTEIQLLSRARRAEPAQAQVDGREVVQEVLERLDSAIREASATVQVEGELPRLKVERV
                     WATQALYNLVANALKFRRPGAPVEIRVAAWQKDGLAGFQVLDRGPGVPPDQSERIFQL
                     FQRGVGREIPGTGAGLAIVRQIAERHGGRAWVEPRQGGGSVFTVTFAAEEGRAA"
     gene            complement(4647..>4989)
                     /locus_tag="VLD58_13460"
     CDS             complement(4647..>4989)
                     /locus_tag="VLD58_13460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55364.1"
                     /translation="TSGPTLPTPILWDVRQVLTLREVLPVAGRQIRLDGLPTRSGLKH
                     QFRTVATGLGLLLGLLGATMLAGWWIGAAPAVRPTLPWPCCSSAGPSWPGAGAPSAPA
                     ASGWRPAHWQP"
BASE COUNT          755 a         1705 c         1747 g          782 t
ORIGIN      
        1 aaggacaagg atatggcggc atcgatgcgg ctgtcgcagc tgatgagcat ggagaccatg
       61 aaggagtgca agaagtactc gaagaacaac aacgacgacg acgaatgagg actcgccgcc
      121 acctcgctgc cctcctgacc ctcttcgccg ggggttcggc cgcgccggtc gtgccggtca
      181 ccttcgacac cggccagggt ccgctgcggc tggcccagtc ggagccggga gagctggcgt
      241 ggacggcagc gtgggagcgt ggtgccggtg ggctcgagtg gaccgagctc cggatgcggg
      301 gccgcggaga ggtccgtcgc acccgggtgg tggtcgcccg ggttgatccg gggtcgttcg
      361 tgatttcgct cgaaaacggg atggcgccgg gcgggttgat gccggtctgg accctcgacc
      421 gggcgccggc gggcgccgcg ctggcgttca acgcgggaat gttcgccaac gacggtgcct
      481 ggggctgggt cgtgcaccgc ggccaggagt accgcgcgcc caggcgaggc ccgctggccg
      541 cagccgtgat cgtggaccgt gcgggacgag tgcggctggc cggcgatgcg gaagtcgatt
      601 cgctacgcgc cgcgaaccgg ctcggtggcg tggtagaggc gttccagtcc taccccgcgc
      661 tcctcaggga gggcgagctg ccgaacctcc tcgaagtcac ctcgcctgac atcgatctcg
      721 aacatcgaga cgcgcggctg gcgctcgggg tcgaccgcga agggcgcctc ctcctggcgc
      781 tcacccgctt cgatgcgctg ggcccgtcgc tcggctcggt gcccttcggc ctcaccattc
      841 ccgagatggc ccgggtgatg cgcgcgctgg gcgccaactc ggcagtggcg ctcgatggcg
      901 gtatttcagc tcagctgttg ctgcgagatg ggggcggcga ggtacaccgc tgggaggggt
      961 tccggccggt gccgctgggg atgagcgtgg tgccgaagtg aggagcgaga agtaagaagt
     1021 gagaagggag aagggtgaag ggagagtcga caacttctcc cttctccctt ctcccttctc
     1081 ccttctcccc tctagatcac ccgcagctcc accgcccgcc gtgccggccg cgacgatttc
     1141 tcccggtaca tcgccgcatc cgccacgctc aggagcccgt cagggtttct cccgtcgtcc
     1201 gggaagatgg cgagcccggc gctgaacccg atcgggaagg catgctcgcc cacctggatc
     1261 ggatccttga agagcatccg gagcgacagc accagcgact ccgccacgcc ccgctcgggg
     1321 atcttttcga acagcaccgc gaattcgtcg ccgcccagcc gcgccagcgt gtcgcttcgg
     1381 cgcaccccat tcgagagccg ctggctcacc tggatcagga cttcgtcgcc ggtggcgtgt
     1441 ccgtgaccgt cgttgaccgg cttgaagccg tcgaggtcga gatacagcac cgccagtcgc
     1501 tcccgccggc gggtcgcctg cgcgatggcg tgggagagcc ggtcgaaata gagcacccgg
     1561 ttgggaaggc cggtgagcgc gtcgtgagtg gcacggtggg cctcctgctg ccgggctatt
     1621 tcaagctcgg tcatcaaccg gtggcgttcg tgcgagtgac ggattgtgcg gatcagagtc
     1681 cagctgtcga cccttccctt caccagataa tcctgcgccc cgctccgaac cgcggccatg
     1741 gccagccgct cgtcgtcatc gccggtcagc acgatgatcg ggatctcggg acagtgctcg
     1801 tgcagccggg tcaggctctc gatgccggtg gtgtcgggga ggttgaggtc gagcaggatc
     1861 acctcgggcc gcacctggcc ggtgagctgg agggcctgct ccagcgagct ggcgcggagg
     1921 agccggcagg gatcgcccgg cagttcctcg agcagtacgc tgaggagcag cgcgtcatcg
     1981 gggttgtcct cgaccaccat cacaatccgg cggtgccggt ggcccggcag ctcgggcagc
     2041 ccggaggagc cggtgacttc ggtctccggc attgcgctct cgtccatcat gaggggagcc
     2101 tgcagacgag ggtccaatag tcctgcagct cccgcaccac accggcgaag gcttcgaagt
     2161 cgtccggttt gcgtacatag ccggccgcgc cttcggcgta ggccgcacgg atgtcggacg
     2221 gctggtcgct caccgtgagc acgatgaccg ggatgtgccg gagggccgga tcgcgtttga
     2281 tggcgcgcag ggtctcgatg ccgttgaggc ccggcatgtt gaggtccagg aggatgagtc
     2341 cggggcgccg gacccgctcg aacggggcct catgccgcag gtacctgagc gcttccattc
     2401 cgtcacccgc cacgtgcgca atccggagcg cctcggttgc ctcgaacgct tcccgggtga
     2461 ggaccaccgc atcctcgctg tcgtccacca ccaggatgtc gatcgggcgg cggatcatcg
     2521 tctcgaggtt catgcggccc gtccttcttc cgcggcgaag gtcacggtga acaccgaccc
     2581 cccaccctgt ctcggctcga cccacgcccg gccgccatgc cgctcggcga tctggcggac
     2641 gatcgcgagt ccggcgccgg tgccggggat ttcccgcccc accccgcgct ggaagagctg
     2701 gaagatccgc tcggactggt cgggcggcac gccgggtccc cggtccagca cctggaagcc
     2761 ggcgagcccg tccttctgcc aggccgccac gcgaatctcc accggcgcac ccggccggcg
     2821 gaacttgagg gcgttcgcca ccaggttgta cagcgcctgg gtcgcccaca cccgctccac
     2881 cttgagcctc ggcagttcac cttccacctg gacggtggca ctcgcctcgc gaatcgcgct
     2941 gtccagccgc tccaggacct cctgcaccac ttcccgccca tccacctgtg cctgggccgg
     3001 ctccgcgcgg cgggcccgcg agagcagctg gatttcggtg aggagctgac ccagccgtcc
     3061 cgtcgccttg accacccgct ccaggaaatc gagtcccttg ggatcgagct gacccgcgtg
     3121 ccgggtggtg aggagactcg agaagctctc gatcgaccgg agcggctcct tgagatcgtg
     3181 ggagatcaca tggagcagcg tctccaggtc cttgttgcgg ccggccaggt cgagctcgct
     3241 ccgctggagc gccgcctccg ccagcttccg ctcggtgatg tcggtggcga cgccgcagat
     3301 ccaccagccg ccctgcccgt ccggcatcgg cgctttggaa accaggaaac tccgctgtcc
     3361 gccgtccggc acatcgagca cgacctcgcg ctcgtgtggg gcgccgtgct cgagcgccca
     3421 cagatccgag gtccgagcct gttccgctac ggtgtgaacg aacaggtctt cgtcggtgca
     3481 accagggatc gccgtgggcg cgaggccggt catccgtccg aatacctggt tggcgagcag
     3541 atagcggccg ttggcttcct tgacgaagac gcccgccggg ctgtggtgca ggaccgtttc
     3601 gaggagccgc cggctcgccg aggcttcatg ctccagtgcc ctgcgcgcgg tgatgttccg
     3661 cagcaggccg accgcgccga tcacgtgacc ccgaccgtcc ttcaccggac cgaaggaccg
     3721 ttcgtagatg caggccgacc cgtccggctg cgccagctcg tcttccgagg tgaaccgctc
     3781 gcctgccagg gcccgctccc atgcccggcg ctgtgccccg ctcgcatggt cgtcgcggaa
     3841 cgccgccatg taggcccggt tcgccaccac gtagttgaag tcggagtcga tcgcggcgac
     3901 caggtcgggc gcgctttcca tcacggcctg gagctgtgcc cgcgccgcct ccgccttgag
     3961 cgacgtggca gtcagcgccg tggtccgctg catcacctcg gcctggagct cggtgcggat
     4021 cttctctccg ctcttgagcg cccggttcag gctgaactcg gcccggtcga ggtcgcggaa
     4081 cgcccgccag ccgaacgcca gcatggccag caggaacacc agggtgcgga gcgccgaggc
     4141 ttcgccgtcg gtgatcgcgc cggcagactc ccacgaggtg agcagcgccg cgaccgcgag
     4201 caggagcggg gcgtacatga accccaggcg gcgggcttcg cgtcccgcaa aggaggtcga
     4261 gctcaccagg ctcatcagcg gccccgttgg atggagcagc aggagagcca gagagccggc
     4321 gatgaggccg gcggtggaac ctggcgcaat cgacccgtag ctcgggtcca gctgcaccag
     4381 gaaccgggtg tggtagatgt ggccgagcag ggtcccgaga ccgagcagaa ggccgccgag
     4441 ggccagccgt tcggtgctgt cgaggcggcc ccgcttccgc ggtcgcgagg ccagtgccgc
     4501 gccggtgccg agcagcactg tgccgacagc catgaagagc gacatgcggc cgggaaagag
     4561 agagtctgtc ccccgatccg gcgccagcag ggtgtcgata cccaggtcca cgtggacgaa
     4621 gtcctcgacc agggtgagga ggccgatcag ggctgccagt gcgccggccg ccatcccgaa
     4681 gcggcgggcg ccgagggcgc gccggcaccg ggccaggatg gccccgccga ggagcagcat
     4741 ggccagggca gcgttggcct caccgccggc gccgcgccaa tccaccaacc ggccagcatg
     4801 gtggccccga gcaggcccag cagcaggccg aggccggtgg ccacggtccg gaactggtgc
     4861 ttgagccccg atcgggtcgg aagtccgtcc agcctgatct ggcgacccgc caccggtaga
     4921 acctcgcgca gggtaaggac ttgtctcacg tcccagagta tcggcgtggg gagggttgga
     4981 cctgaggtt
//
LOCUS       DATIFF010000916         2188 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1191066, whole genome shotgun sequence.
ACCESSION   DATIFF010000916 DATIFF010000000
VERSION     DATIFF010000916.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2188
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1191066"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..1554
                     /locus_tag="VLD58_13465"
     CDS             133..1554
                     /locus_tag="VLD58_13465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HSB55365.1"
                     /translation="MTSTRIERDPLGEKPVPSDALYGIQTLRAAENFPISGLRPLPAF
                     VDAVVWIKRSAALTHKETGRLEPALADAIVRAADEVLGGHHRDQFIVDVYQAGAGTSH
                     NMNVNEVLANRANEMLGKPRGGYAPVHPNDHVNMAQSTNDVIPTAMRLAVLATLPATL
                     AALDRLARALLGRGQAFDGIVKSGRTHLQDATPIRLGQEFTAYGHTVQRHRDKLAQAA
                     DWLRDMNIGGTAVGTGINAEREYPGLMVKHLRQVSGLDLREGADRVQLMQSMGDVATL
                     SGTFRAYVLDLNKIANDLRLLASGPRTGLAEILLPAVQPGSSIMPGKVNPSIAEMVNQ
                     VCYQALGLDTTVALAAEAGQLELNVMMPVITHNIVFGLIIVGNATRVLAERCVDGIEA
                     DERQCAYWLERSPALVTALAPKIGYAEAAKLAKEAIATGLTVKELVIKKGLLQGRDLE
                     EVLDLRAMTEIGIPGGKALPGGG"
     gene            1648..2106
                     /locus_tag="VLD58_13470"
     CDS             1648..2106
                     /locus_tag="VLD58_13470"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HSB55366.1"
                     /translation="MRITTWTEYSLIISLHLARRGAAGSGPVAAREIAETERLPGDYV
                     EQILLRLRRAGLVESVRGAKGGYFLAKEPQSISMRDIMTASEHQTFEMNCATHPVDSE
                     RCAPSSGCTIRPVWQALQQRVDDLLAGISLADLLKEEPQVQDLVAIEPAS"
BASE COUNT          360 a          775 c          724 g          329 t
ORIGIN      
        1 acgccgccga aatctcccgg aaatggtcgc tcatcggttg tcgcccccct tccgggccgg
       61 tatcattccg ccactcgcac ggcggcgcgg gccgcgcgcc gcggacttca actcgggacc
      121 gtccggcatc ctatgaccag cacccgcatc gagcgcgatc cgctcggcga aaagcccgtc
      181 ccctccgacg cgctctacgg catccagaca ctccgcgccg cggagaactt ccccatctcg
      241 ggcctccgtc cgctcccggc cttcgtggac gcggtcgtgt ggatcaagcg gtcggcggcg
      301 ctcacccaca aggaaaccgg acgcctggag ccggcgctcg cggacgccat cgtgcgggcc
      361 gccgacgagg tgctcggcgg gcaccaccgg gatcagttca tcgtggacgt gtaccaggcg
      421 ggcgcgggca cgagccacaa catgaacgtt aacgaagtgc tcgccaaccg cgccaacgag
      481 atgctcggca agccgcgcgg cgggtacgcg cccgtgcacc ccaacgatca cgtcaacatg
      541 gcgcagagca ccaacgacgt gattcccacc gccatgcgcc tcgcggtgct ggccacgctc
      601 ccggccacgc tcgcggcgct cgaccggctc gcccgtgcgc tcctcggccg cggccaggcg
      661 ttcgacggca tcgtgaaatc gggccggacc cacctgcagg acgccacccc gatccggctc
      721 ggccaggagt tcaccgccta cggccacacg gtgcagcggc accgcgacaa gctggcgcag
      781 gcggccgact ggctgcgcga catgaatatc gggggcacgg ccgtcggcac cggcatcaac
      841 gccgagcggg agtatccggg gctcatggtg aagcacctgc gccaggtgag cgggctcgat
      901 ctgcgcgagg gcgcggaccg tgtccagctc atgcagtcca tgggtgacgt ggctaccctg
      961 agcggcacct tccgtgccta cgtcctcgat ctcaacaaga tcgccaacga cctccggctg
     1021 ctcgcgtcgg gcccgcgcac cgggctcgcc gaaatcctgc tgcccgcggt gcagccggga
     1081 tcgagcatca tgcccggcaa ggtgaacccg tccattgccg aaatggtgaa ccaggtgtgc
     1141 taccaggccc tgggcctgga caccacggtg gcgctggccg ccgaggcggg gcagctcgag
     1201 ctcaacgtga tgatgccggt catcacccac aacatcgtgt tcgggttgat catcgtgggc
     1261 aacgcgacgc gcgtgctggc cgagcgctgc gtggacggca tcgaggccga cgagcgccag
     1321 tgcgcctact ggctggagcg gagcccggcg ctggtcacgg cgctcgcgcc gaagatcggg
     1381 tatgccgagg cggccaagct cgccaaggag gccatcgcca ccggcctgac ggtcaaggaa
     1441 ctcgtgatca agaaggggct gctgcagggc cgggatctgg aggaggtcct cgacctgcgg
     1501 gccatgacgg agatcggcat ccccggcggc aaggccctgc cgggcggtgg atgaagagtc
     1561 cgggaattcc ggaggaaggc caggcacggg gtaaattggg acttttccct gttccatttc
     1621 cctggcgccg accacatatt atcgcccatg cggatcacga cctggacgga atacagcctg
     1681 attatctccc tgcatctcgc ccgccggggc gctgccggga gtggccccgt ggcggcccgc
     1741 gagatcgcgg agactgagcg gttgccgggc gattacgtcg agcagattct cctccggctc
     1801 cggcgcgccg gcctcgtcga gagcgtacgc ggcgccaagg gcgggtactt cctcgccaag
     1861 gagccgcagt ccatctcgat gcgcgatatc atgaccgcct cggagcatca gaccttcgag
     1921 atgaactgtg ccacccatcc ggtggacagc gagcgctgcg ctccctccag cggctgcacc
     1981 attcgtccgg tgtggcaggc gctgcagcag cgggtcgacg atctcctcgc cggtatctcc
     2041 ctggccgacc tgctcaagga agagccgcag gtccaggatc tcgtcgccat cgagccagcc
     2101 agctgacacg gtgggcatcc acccggcgcc cggcctcgtg ccgggcgttt ttgttttgtc
     2161 gccgggcagc ttcccagttg actctcca
//
LOCUS       DATIFF010000917         1843 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_268312, whole genome shotgun sequence.
ACCESSION   DATIFF010000917 DATIFF010000000
VERSION     DATIFF010000917.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_268312"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..645)
                     /locus_tag="VLD58_13475"
     CDS             complement(<1..645)
                     /locus_tag="VLD58_13475"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSB55367.1"
                     /translation="MHPVLILRYGQRRLPLSEGAVAIGRLEECDILLEGTEISRRHAR
                     IVATPEGPLLVDRSRFGTLLNGSLVVAPSLLQAGDVILVGSYDLHVEFGEASPRPAEH
                     GGLRRQLGLWRRRYGLAELFGTVALIAAALLVQRVTGMVILAALAGSLAEAAWFYAVL
                     LGRETRQERRTARLGGFVPRPLRELGRDLLLEFGAAERVDGLLLRPACLGLGLAW"
     gene            complement(662..1081)
                     /locus_tag="VLD58_13480"
     CDS             complement(662..1081)
                     /locus_tag="VLD58_13480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55368.1"
                     /translation="MTGRTPGQEDPVRDYLRRSGAPYSVVAQGLRGLVENWERVVEQV
                     EAGYALGLDDYLNDMDGRQLLQNALDLAPDEVREAFLPRVRTADARIRPVLTPAGHCL
                     WGSIVAEDEQWIEEVNWWYFEKPRNPGPRLKQELDAS"
     gene            complement(1078..1548)
                     /locus_tag="VLD58_13485"
     CDS             complement(1078..1548)
                     /locus_tag="VLD58_13485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55369.1"
                     /translation="MDQRRLIRLALALVVAAGVWLTQQYRGRWGTPVPPQSPPASQSA
                     APASPASAGEAGHPEVGFRNAGHLHQHYQKHGAEFGRISEAEYLRRAQELRDRPAGGD
                     ILEAVRADGVITRFDRASGAFLAFDRDLTIRTFFQPNDGERYFKRQLARGRSDS"
     gene            complement(1548..>1843)
                     /locus_tag="VLD58_13490"
     CDS             complement(1548..>1843)
                     /locus_tag="VLD58_13490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55370.1"
                     /translation="TTARLDQAVDSVVTRDGVTEIHLSSRGTMVMPADLAITLTNAAG
                     KVEIRTVALPVDMWNLGSRFVYRIRTDATVRKVEVDPDADLPDIDRSNNRWAH"
BASE COUNT          290 a          679 c          612 g          262 t
ORIGIN      
        1 ccacgccagg cccagaccca gacacgcagg cctgagcagc aggccgtcca cccgttccgc
       61 cgcgccaaat tccaggagca ggtcccggcc cagctcccga agcggtcgcg gcacgaaccc
      121 acccagacgg gcggtgcgcc gctcctgccg cgtctcccgg ccgagcagca cggcgtagaa
      181 ccaggcggct tcggccagac ttccagccag ggccgcgaga atcaccatcc cggtgacccg
      241 ttgcaccagg agcgccgcgg cgatcagcgc gaccgtaccg aacagctcgg ccaggccgta
      301 gcgcctgcgc cagagcccaa gctgccgccg cagtcctccg tgctcggccg gacgcgggga
      361 ggcctcaccg aactcgacgt ggagatcata ggagccgacc aggatcacgt cgccggcctg
      421 gagcagcgac ggggcgacca ccagcgagcc gttgagcagc gtcccgaagc ggctccggtc
      481 gaccagcagc ggcccctcgg gtgtggcgac gatgcgcgcg tggcgacggg aaatctccgt
      541 gccctcgagc aggatatcac actcttcgag gcggccgatg gcgaccgctc cctcgctcag
      601 cggaagccgg cgctggccat aacggagaat cagcacaggg tgcatgatgc cgtactcgac
      661 ctcaggaagc gtcgagctcc tgcttgaggc gcggaccagg gttccgcggc ttctcgaagt
      721 accaccagtt cacttcctcg atccactgct cgtcttcggc cacgatgctc ccccagagac
      781 agtgcccggc cggcgtgagc accggacgga tccgcgcgtc ggcggtgcgc acccggggca
      841 gaaaggcctc gcggacctca tcgggcgcga ggtcgagggc gttctgcagg agctgccggc
      901 cgtccatgtc gttgagatag tcgtcgaggc cgagggcata gcctgcctcc acctgctcga
      961 ccacccgctc ccagttctcc accaggccgc ggagcccctg cgccaccacc gagtagggcg
     1021 cgccgctccg gcggagatag tcgcgaaccg ggtcttcctg gccgggagtg cgccctgtca
     1081 tgagtcgctc cgtccccgcg cgagctgtcg cttgaagtag cgctcgccgt cgttgggctg
     1141 gaaaaaggtc cgaatcgtca ggtcacggtc aaaggccagg aaggccccgc tcgcccggtc
     1201 gaaccgggtg atcaccccgt ctgcccgcac cgcctccagt atatctccac cggcgggccg
     1261 gtcgcgcaac tcctgcgccc gccgcaggta ctccgcctcg ctgatccggc cgaactccgc
     1321 cccgtgcttc tggtagtgct ggtgcaggtg ccccgcgttc cggaacccga cctcggggtg
     1381 ccctgcctcc ccggccgacg ccggagatgc cggcgccgcc gactgggacg cgggcggtga
     1441 ctgaggcggg accggtgtcc cccagcgtcc ccggtactgc tgcgtaagcc agacgcccgc
     1501 ggcgacaacc agcgccagcg ccagccggat caggcggcgc tggtccatca gtgggcccag
     1561 cggttattgc tccggtcgat gtcggggagg tccgcgtcgg gatcgacctc gaccttccgt
     1621 accgtggcgt cggtccggat ccggtagacg aagcgggacc cgaggttcca catgtcgacc
     1681 gggagcgcca cggtcctgat ctccaccttc ccggccgcat tggtgagggt gatcgcgaga
     1741 tcggccggca tgaccatggt gccccggctc gagagatgga tctccgtcac gccgtcccgg
     1801 gtcaccaccg agtcgaccgc ctgatccagc ctcgcggtgg tga
//
LOCUS       DATIFF010000918         1128 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1344036, whole genome shotgun sequence.
ACCESSION   DATIFF010000918 DATIFF010000000
VERSION     DATIFF010000918.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1344036"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..295
                     /locus_tag="VLD58_13495"
     CDS             <1..295
                     /locus_tag="VLD58_13495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55371.1"
                     /translation="IAVFAQRYGMTPAGERRAHYYVQESVGIATGFLLAALHHAGLVA
                     LTHTPNPMGFLADLLERPANERPVMLVVTGYPAPDARVPVLRRKSLEDIATFR"
     gene            857..>1128
                     /locus_tag="VLD58_13500"
     CDS             857..>1128
                     /locus_tag="VLD58_13500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSB55372.1"
                     /translation="MAFTSLKLHPSLLKGIRELGFVRPTPIQADAIPPALEGRDVLAC
                     AMTGSGKTAAFILPILQRLIDRPRGTTRALVLTPTRELAAQILEDL"
BASE COUNT          185 a          443 c          348 g          152 t
ORIGIN      
        1 catcgccgtc ttcgcccagc gctacgggat gaccccagcc ggagagcgtc gggcccacta
       61 ctacgtccag gagtccgtcg ggatcgccac cggcttcctc ctggccgcgc tgcaccacgc
      121 cggcctggtg gcgctcaccc acacccccaa cccgatgggc ttcctggccg atctgctgga
      181 gcgcccggcc aacgagcgac cggtcatgct ggtggtgact ggctatccgg caccggatgc
      241 ccgggtgccg gtgctccgcc gcaagtcgct ggaggatatc gccaccttcc gctgaactcg
      301 cggtcaggag caccggggcg ggcgtggtcg tggacgccga agcgccaggc gagccccgcc
      361 tcgaaggccg caaacccggg cccaaatccc gagggaaaat ggatgcgggc accaagcgcg
      421 agacagcagg tccgatccca tcgtggcgcg acccacggag aacgagctcc gcccgacggc
      481 ccaggggagg gccgcctcac cgttcatcgc tcccgcgaca cccagtgccg tggtcactcg
      541 cctcatcgca tccagagccg gtaccatcgt tcctccgctc gagccacccc gggcacccac
      601 ctgcggagcc caaagagcat gccgagcacg aacagaacgg acagtgtgta tccggcgatc
      661 gcgattctgg cgagcggtag aaggaagcgc gagactggga ccaggtcggc cggcatgacc
      721 ccatagtggc gccccgccgt gccctgcgcg tgacttgcac tgaggagatc gccgcctgcc
      781 gcccagcgcc gccgcccccc tccatggtat agtcctccca cacccgccgt ccctacgcgt
      841 cctctcagga gattccgtgg cgttcacctc gctcaagctc caccccagtc tcctgaaggg
      901 catccgggag ctcggcttcg tccggcccac cccgatccag gccgacgcca tcccgcccgc
      961 gctcgagggg cgcgacgtac tggcctgcgc catgacgggg agcggcaaga ccgccgcctt
     1021 catcctgccg atcctccagc ggctgatcga ccggccgcgc ggcaccaccc gcgcgctggt
     1081 gctcaccccc acccgggaac tcgccgccca gatcctggag gacctgaa
//
LOCUS       DATIFF010000919         2829 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1805217, whole genome shotgun sequence.
ACCESSION   DATIFF010000919 DATIFF010000000
VERSION     DATIFF010000919.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2829
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1805217"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..462)
                     /locus_tag="VLD58_13505"
     CDS             complement(<1..462)
                     /locus_tag="VLD58_13505"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HSB55373.1"
                     /translation="MLSQTAEYALRAVLYIARGRPVAPPCSVEQLAEALGVPRNYLSK
                     TLHQLARAGVLDSTRGRGGGFRLARSPERIRLIEVVRPFDDIGEGRRCLLGRGACSDR
                     AACEAHESWKPVAERVAAYFREKTVAEVMNGGMAGRRDPRRRVSRDASYQPP"
     gene            661..1089
                     /locus_tag="VLD58_13510"
     CDS             661..1089
                     /locus_tag="VLD58_13510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55374.1"
                     /translation="MPRPALALWSVPLLLLAGCGGDRSATPGAAQADPAAAAPPAAAT
                     VTSSDPRAGIFLTKGCPQCHTISALGIKSPAEIGPDLTYAYTDVQSRFSMKLEEFLHN
                     PTGTMQVVLSSQISLSPAERDSVIGILKGIHERGEDEKKE"
     gene            1126..>2829
                     /gene="nosZ"
                     /locus_tag="VLD58_13515"
     CDS             1126..>2829
                     /gene="nosZ"
                     /locus_tag="VLD58_13515"
                     /EC_number="1.7.2.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR04246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050304 - nitrous-oxide reductase activity
                     [Evidence IEA];
                     GO_process: GO:0019333 - denitrification pathway [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-dependent nitrous-oxide reductase"
                     /protein_id="HSB55375.1"
                     /translation="MTRRLLPLVLLAAAACAPSTPQAGGSAGGRLADARDAAQRTFVE
                     PGKLDEFYLFYSGGHSGQVYVAGVPSMRHIATIPVFAPYPATGYGFDQESKKMLGQYT
                     WGDVHHPALSKTKGDYDGRWLFVNDNANNRLARIDLRDFKTKQILGPIPNSSGNHGSA
                     FVTENTEYALVASRFSIPLPRGTYAPLSKYATDYHGMVSGVKIDSATGTMSVGWQIIT
                     PPFNWDLASTGKEISRDWGVWSSYNTERATGRLEVTASQKDRDYLAFVNWRKAADAAA
                     AGKGKMMDGVRVLDPRDIPGAIYLVPLAKSPHGADFSPDGRYVVGSGKLAPYTTVYDF
                     QKFLAAVEKNDVVGDEDGIPVLKYEDIKVAEVPVGLGPLHTQFDDQGYAYTSMFIESV
                     ITKWKLGPFDGNDSALVVAKIPVHFSVGHLVVAGGDTRHPVGKYLVSMNKLSKGRHLN
                     VGPSQPESSQLIDITGSGMSMLYEAYTEPEPHFAQLIKADLLKPIEVYPKAENKDPHA
                     IWAAADGKITRSGKTVEVNLFAIRSYFSPGEIEVQQGDSVVIHMTNAEQERDMLHGLG
                     IA"
BASE COUNT          496 a          995 c          928 g          410 t
ORIGIN      
        1 ggggggttgg taggaggcgt cccggctcac cctcctccgg gggtcccgcc gtcccgccat
       61 cccgccattc atcacctccg ccaccgtctt ctcccggaag taggccgcca cccgctccgc
      121 caccggcttc cagctctcgt gcgcctcgca ggcggcccgg tcggagcagg ccccccggcc
      181 cagcagacag cgccgtccct ccccgatgtc gtcgaacggc cgcaccacct cgatcagccg
      241 gatccgctcc gggctccggg ccaggcggaa gccgcccccc cgcccgcggg tcgagtcgag
      301 cacgcccgcc cgggccagct ggtgcagggt cttggagagg tagttccggg gcacgcccag
      361 ggcttcggcc agctgctcga ccgagcaggg cggggcgacg gggcggccgc gggcgatgta
      421 gagcacggcg cggagggcgt attcagccgt ctgggagagc atgggcggga tctttcagcg
      481 ggcattaatc ataatttcat gaacatatga cgattataga cccgcgtccc gcccgaggga
      541 aggggagacg ccggcgagcg gaccgcatga agcgactctc acgaaggctt cacgagggct
      601 caagattcgc cgcataggtt gcccccggaa cccctgacac cgccacatcg gagaccacga
      661 atgccgcgtc ccgctctcgc cctctggtcc gtccctctgc tgctgctcgc cgggtgcggc
      721 ggcgaccggt ccgcgacccc gggcgcggcc caggccgacc ccgccgccgc ggcgccccca
      781 gcggccgcca cggtgacctc gagcgatccg cgggccggaa tcttcctgac caaggggtgt
      841 ccgcagtgcc acaccatctc ggccctgggg atcaagtccc cggccgagat cggtcccgat
      901 ctcacctacg cgtacaccga cgtgcagagc cggttcagca tgaagctgga ggagttcctc
      961 cacaacccga ccggcaccat gcaggtggtg ctcagctcgc agatctcgct cagccccgcc
     1021 gagcgggact cggtgatcgg gatcctgaag gggattcacg agcggggcga agacgagaag
     1081 aaggagtagc gcatgtccac cgtccatcag ccgaaggagt cctcgatgac ccgccgtctg
     1141 ctgcccctgg tgctgctggc cgccgcggcc tgcgcgccct ccacgcccca ggccggcggc
     1201 tccgccggcg gccgtctggc cgatgcccgc gatgccgccc agcggacctt cgtcgagccg
     1261 ggaaagctcg acgagttcta cctcttctac agcggcgggc actccggcca ggtctacgtg
     1321 gccggcgtcc cctcgatgcg ccacatcgct accatcccgg tcttcgcgcc ctatccggcc
     1381 accggctacg ggttcgacca ggagagcaag aagatgctgg gccagtacac ctggggcgac
     1441 gtgcatcacc cggcgctgtc caagaccaag ggcgactacg acgggcgctg gctgttcgtc
     1501 aacgacaacg cgaacaaccg cctggcgcgg atcgacctgc gggacttcaa gaccaagcag
     1561 atcctgggac ccatccccaa ttcgagcggc aaccacggct cggcgttcgt gaccgagaac
     1621 accgagtacg cgctggtcgc gagtcggttc tcgatcccgc tgccgcgggg cacctacgcc
     1681 ccgctgagca agtacgcgac cgattatcac ggcatggtga gcggggtcaa gatcgacagc
     1741 gccaccggca ccatgagcgt aggctggcag atcatcaccc cgcccttcaa ctgggacctg
     1801 gcgtccaccg ggaaggagat ctcccgagac tggggcgtgt ggagctcgta caataccgag
     1861 cgcgccaccg gacggctgga ggtgaccgcg agtcagaagg atcgcgacta cctggcgttc
     1921 gtcaactggc ggaaggcggc ggacgccgcg gcggccggca aggggaagat gatggacggg
     1981 gtccgggtcc tcgatccccg ggacattccc ggcgccattt atctggtccc tctggcgaag
     2041 agcccccacg gggcggactt ctcgcccgac gggcgctacg tggtgggcag cggcaagctg
     2101 gccccgtaca ccacggtcta cgacttccag aaattcctcg ccgcggtcga gaagaacgac
     2161 gtggtgggcg acgaggacgg catcccggtc ctcaagtacg aggacatcaa ggtggccgag
     2221 gtgccggtgg gcctgggccc gctacatacc cagttcgacg accagggcta cgcctatacg
     2281 tcgatgttca tcgagtcggt gatcaccaag tggaagctgg ggccgttcga cggcaacgac
     2341 tccgcgctgg tggtagccaa gatcccggtg cacttctcgg tgggccacct ggtggtcgcg
     2401 ggtggcgaca cccggcaccc ggtgggcaag tacctggtct cgatgaacaa gctctccaaa
     2461 ggccgtcacc tgaacgtggg gccctcgcag ccggagtcga gccagctcat cgacatcacc
     2521 ggttccggga tgagcatgct gtacgaagcc tacaccgagc cggagccgca cttcgcccag
     2581 ctgatcaagg ccgacctgct caagccgatc gaggtgtatc ccaaagcgga gaacaaggac
     2641 ccgcacgcca tctgggccgc ggccgacggg aagatcaccc gcagcggcaa gacggtggag
     2701 gtgaacctgt tcgccatccg ctcctacttc tcacccggcg agatcgaggt gcagcagggt
     2761 gactcggtcg tcatccacat gaccaacgcg gagcaggagc gcgacatgct ccacggcctc
     2821 ggcatcgcg
//
LOCUS       DATIFF010000920         2720 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_268546, whole genome shotgun sequence.
ACCESSION   DATIFF010000920 DATIFF010000000
VERSION     DATIFF010000920.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2720
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_268546"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..742)
                     /locus_tag="VLD58_13520"
     CDS             complement(<1..742)
                     /locus_tag="VLD58_13520"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSB55376.1"
                     /translation="MKVLVTGATGFVGSHLVDALRQRHVEVTALVRSAAKARSLEGHG
                     VRLVSGDLHDAKALERAAAAQDVIFHVAGLVAARNEAEFLRTNREGTAGLLEAATRAG
                     ARRFVLVSSMAAGGPSAPGRPRTGAESPQPVTAYGRSKLAAEELVRASGVPWTIIRPP
                     MVYGPGDREVLKVFRLARLGIAPVFGAGTQELSAVHGADLARALVAAALAERAIGRLY
                     YACHPETFTSAAFVRSVGAAVGRAVRVLR"
     gene            complement(739..1857)
                     /locus_tag="VLD58_13525"
     CDS             complement(739..1857)
                     /locus_tag="VLD58_13525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55377.1"
                     /translation="MRVRPARSPTDLKRFIDLPYRLHARDPLWVPPLRRDVATLLSRT
                     KNPFFDHAEAEYFLAERDGAVVGRIAAVHNRLHNETHGDRVGFFGFFECIDDRAVADA
                     LLAVAADWLRPRGLDTLRGPASFSVNDECGLLVDGFDTPPTLMMPHNPRYYPALLESA
                     GFVKAKDLWCFEGTDPAGAAGERLVRATDLVKRRFGITVRPLNMRDFDGDVARIKRLY
                     NVGWEKNWGFVPMTDREIDHLAEQFKPVVVPELVLFAEKDGEVVGFAIAMPDLNTAFR
                     GNRSGAFLPGLIRVLWMLKTRRIHRLRVLLLGALPEYRGKGVDALLYATIWRNGNANA
                     IHWGEAGWILEDNPAMIAGMVKLGWKHYKTYRLYDRPL"
     gene            complement(1866..>2720)
                     /locus_tag="VLD58_13530"
     CDS             complement(1866..>2720)
                     /locus_tag="VLD58_13530"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSB55378.1"
                     /translation="GYQANLGLISGLVGRGEVVYLDTLDHASIVDGAKMSYGETERFN
                     HGDLAGLERKLERDRSGRPSMIVVDGVYSMEGDIADIPGLLRVARKHGAVLAVDDAPS
                     IGVLGPNGDGTAAHFGLADELDIIAGTFSKSLASIGGFVAAPESVIHYLRHHSRPLMF
                     TASLPPANTAGVLAALEVLQREPERRDQLWANTRRLHEGFRSLGFDIGPTETPIVPVL
                     IGPMEKTFLMWRKLFDAGVFTNPVAPPAVAPSQCRLRTSLMATHTFEQIDYALEAFAR
                     IGRELGVI"
BASE COUNT          439 a          936 c          954 g          391 t
ORIGIN      
        1 cgcgaagcac ccgcaccgct cgacccaccg ccgcgccgac ggagcgcacg aaggccgcgc
       61 tggtgaaggt ctcggggtgg cacgcgtagt agagccgccc gatcgcgcgc tcggcgagag
      121 cggccgccac cagcgcccgg gccaggtccg cgccgtggac ggcggagagc tcttgggttc
      181 cagcaccgaa caccggggcg atgccgaggc gggcaaggcg gaagaccttg agcacctccc
      241 ggtccccggg gccgtacacc atcgggggcc ggatgatggt ccaaggcacg ccactggccc
      301 gcacaagctc ctccgccgcc agcttgctgc ggccgtaggc cgtaaccggc tgcggggact
      361 ccgcgcccgt gcggggccgt ccgggagcgg aggggccacc tgcggccatc gaggaaacca
      421 gcacgaaccg acgagcaccg gcgcgggtgg cggcctcgag caatcctgcc gtcccctccc
      481 ggttggtgcg gagaaactcg gcttcgttcc gggctgcgac caggcccgcg acatggaaga
      541 tgacatcctg ggccgccgct gcgcgctcga gcgccttggc atcgtgcagg tcgccggaga
      601 ccagacgcac tccgtggccc tcgaggctgc gcgccttggc ggcggagcgc accagggccg
      661 tcacctcgac gtgccgctgg cgaagcgcgt cgaccaggtg gctgcccacg aacccggtcg
      721 cgcccgtgac cagcaccttc atagcggccg atcgtagagg cggtaggtct tgtagtgctt
      781 ccagccgagc ttcaccatgc cggcgatcat ggcggggtta tcctccagaa tccagccggc
      841 ctccccccag tgaatcgcgt tggcgttgcc gttccgccag atggttgcgt agagcagggc
      901 atccacgccc ttgccgcggt actccggcag cgcgcccagc agcagcaccc gcagccggtg
      961 gatccggcgg gtcttgagca tccagagcac ccgaatcagc ccgggcagga atgcgccgga
     1021 gcggttgccc cggaaggcgg tgttaaggtc gggcatggcg atcgcaaagc cgacgacctc
     1081 gccgtccttc tccgcgaaga gcacgagctc gggaaccacg acgggcttga actgctccgc
     1141 cagatggtcg atttcgcggt cggtcatggg gacaaagccc cagttcttct cccagcccac
     1201 gttgtagagc cgcttgatcc gcgcgacgtc gccgtcgaaa tcccgcatgt tgagcgggcg
     1261 cacggtaatg ccgaatcggc gcttcaccag atccgtggcg cgcaccaggc gttcgcctgc
     1321 agcgccggcg gggtcggtcc cctcgaagca ccacaggtcc ttcgccttca caaacccggc
     1381 gctctccagc agggccgggt agtagcgtgg attgtgcggc atcatgaggg tgggcggcgt
     1441 gtcgaacccg tccaccagca ggccgcattc gtcgttgact gagaaggacg ccggtccgcg
     1501 cagcgtgtcc aggcccctcg ggcggagcca gtcggccgcc accgcgagga gggcgtcggc
     1561 gacggcccgg tcatcaatac attcgaagaa gccgaagaac cccacgcggt cgccgtgggt
     1621 ctcgttgtgc aggcggttgt gcaccgcggc gatccggccg acaaccgccc cgtcccgctc
     1681 ggccagaaag tactccgcct cggcatggtc gaagaagggg ttcttggtgc gcgaaaggag
     1741 agtcgccacg tcccgacgca gcggcgggac ccagagcggg tcccgcgcgt gaagtcggta
     1801 gggcagatcg atgaagcgct tgaggtcggt cgggctgcgc gccggacgga cgcgcacggc
     1861 agcggtcaga tgacccccag ctcccgtccg atacgggcaa aggcttcgag cgcgtagtcg
     1921 atctgctcga acgtgtgcgt cgccatgaga ctggtccgga gccggcactg cgacggcgcc
     1981 accgcgggcg gggcgaccgg gttggtgaac acgccggcgt cgaacagctt ccgccacata
     2041 aggaaggtct tttccatcgg gccgatgagc accggcacga tcggggtctc ggtcgggccg
     2101 atgtcgaacc cgaggctgcg gaatccctcg tgcaggcgcc gcgtgttggc ccagagctgg
     2161 tctcgccgct ccggctcccg ctgcagcact tcgagcgcgg ccagcacgcc ggctgtgttg
     2221 gccggaggca gcgacgccgt gaacatcaag gggcggctgt ggtgccggag gtaatggatc
     2281 acgctctcgg gcgcggccac gaatccgccg atggacgcca gcgacttcga gaacgtgccc
     2341 gcgatgatgt ccagctcgtc ggccaggccg aagtgggcgg ccgtaccgtc gccgttgggc
     2401 ccaaggacgc cgatggaagg ggcgtcgtcc acggcgagca cggccccgtg cttccgcgcc
     2461 acgcgcagca ggccggggat gtcggcgatg tcgccttcca tcgagtacac cccatccacc
     2521 acgatcatcg agggacggcc cgaacggtcc cgctctagct tgcgttcgag gccggccaga
     2581 tcgccgtggt tgaagcgctc ggtctcgccg taggacatct tggcgccgtc cacgatggat
     2641 gcgtggtcga gcgtgtcgag gtagaccacc tcgccccggc caaccagccc cgagatgagc
     2701 cccaggttgg cctggtagcc
//
LOCUS       DATIFF010000921         2380 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2114166, whole genome shotgun sequence.
ACCESSION   DATIFF010000921 DATIFF010000000
VERSION     DATIFF010000921.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2380
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2114166"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            234..695
                     /locus_tag="VLD58_13535"
     CDS             234..695
                     /locus_tag="VLD58_13535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55379.1"
                     /translation="MSRSWGAPRALLVAACTAALVGCSSFTPTNDTPYTPPAEYRKWF
                     DETQACSGLTGDFDRIKWFVVDGTEFDCPSGKCVGRWNSDHDIFIASSWVDNELVVRH
                     EMLHDLIGHPGHPDPPFGSPCPLTWASWHATDTTSAAVAGRLAALPGQNID"
     gene            complement(818..>2380)
                     /locus_tag="VLD58_13540"
     CDS             complement(818..>2380)
                     /locus_tag="VLD58_13540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55380.1"
                     /translation="LVSGAAVIYALWRSPRDPLVYIGLLAVVVGISLNYVYLPLRAAQ
                     FPPINEGEPIGFFSQALKDVLNRVQYGKPPILELGQPNLGRQAPFFAQLANFWQYFNW
                     QFARDWGQWAGIATALFVGLGLVGLYTLWKNDRRAGWAAILLLGTLTVALVFYMNFKY
                     GFSQYPDKPDLPREVRERDYFFLGSFSAYGVFVALGLGAVMQSLAEMTGGGGGAGGAR
                     RWALVSPVLALAIIPILGNRVTASRAHETLARDFAVDLLESVEPYGILITAGDNDTFP
                     LWYAQEVEGVRQDVTLANLSLMNTRWHLQQLRRRKTPDFDPSRAAALWRNRTWPKPED
                     PVLALSAHELDSLPEAMRVPEKGGLQIDSLTIAFGQDYLLLQDLATIFLIKQNLGKRP
                     IYFSLSDGGYPDQTLGLSAYLVGEGMVRKLMPRPVVPNDSIVLSTGLGYVDLPRTEQL
                     LWHAYHWQAAARDRPRGWVDIPSSSILSLYAIVYAGTADAMRKQGDSTLAARADSVAR
                     AVQREIRKRELE"
BASE COUNT          372 a          836 c          824 g          348 t
ORIGIN      
        1 cgccgggcgc cattatcgcc gtcttccggg cccgcgggag ccggggaata ccactctggt
       61 cgtgctgtgt taagtattgt cacagagcga gttagtgacg cgcacctcgc gccgtgcatg
      121 aggttgctcc gccgcgcggt ccgctccctg cagatgattg cactcggtca ggccgcgcgt
      181 ttcccgcgtt ccctctcccg cggccgcctt ccacgccagg taccggaggc cgcatgtcga
      241 gaagctgggg cgccccgcgc gcgctcctcg tcgccgcgtg caccgccgcc ctcgtcggct
      301 gcagctcgtt cacgcccacc aacgacacgc cctacactcc gcccgccgag taccggaaat
      361 ggttcgacga gacccaggcc tgctccggcc tcacgggcga cttcgatcgc atcaagtggt
      421 tcgtggtgga cgggaccgag ttcgattgcc cgagcgggaa atgcgtgggg cggtggaaca
      481 gcgatcacga catcttcatc gccagcagct gggtggacaa cgagctggtg gtgcggcacg
      541 agatgctgca cgacctgatc gggcacccgg ggcacccgga cccgccgttc gggagcccgt
      601 gcccgctcac ctgggcgagc tggcacgcga ccgatacgac ctcggcggcc gtggcgggca
      661 ggctggcggc gctgccggga cagaacatcg actgacacgg cgcgaacggt gaacgccgga
      721 gaacgagcag ggggctccgc cgatcggcag agcccccttt caccgttcac cgcccacctg
      781 tcaggccgac cgctccggcc gacggctcag gccgcctcta ctccagctcc cgcttccgga
      841 tctcccgctg caccgcccgc gccaccgagt ccgcccgcgc cgccagcgtc gagtcgccct
      901 gcttgcgcat ggcgtcggcc gtgccggcgt acacgatggc gtacaacgag aggatggacg
      961 acgaaggtat gtccacccag ccgcggggcc ggtcgcgcgc cgccgcctgc cagtgatagg
     1021 cgtgccacag gagctgctcg gtccggggca ggtccacata gcccagcccc gtgctcagca
     1081 cgatgctgtc gttgggcacg accggccggg gcatgagctt ccgcaccatg ccctcgccca
     1141 cgagatacgc cgacagcccc agggtctggt cgggatagcc gccgtcgctc aggctgaagt
     1201 agatgggccg cttccccagg ttctgcttga tcaggaagat cgtggccagg tcctggagca
     1261 gcaggtagtc ctggccgaac gcgatggtca ggctgtcgat ctggagcccg cccttctcgg
     1321 gtacccgcat cgcctccggc aggctgtcca gctcgtgcgc gctgagcgcg aggacggggt
     1381 cctccggctt gggccaggtc cgattgcgcc agagcgcggc ggcgcggctc gggtcgaagt
     1441 cgggcgtctt ccggcggcga agctgctgga gatgccagcg ggtgttcatg agcgacaggt
     1501 tcgccagcgt gacgtcctgc cgcacgcctt ccacctcctg cgcgtaccag agggggaagg
     1561 tgtcgttgtc gcccgcggtg atcaggatcc cgtacggctc caccgactcg agcagatcca
     1621 cggcgaagtc gcgggcgagg gtctcgtgcg cccggctcgc ggtgacccgg ttgccgagta
     1681 tgggaatgat ggcgagcgcc agcaccgggc tcacgagcgc ccagcgccgg gcgcccccgg
     1741 cgccgcctcc gccccccgtc atctccgcca gcgactgcat caccgctccc agccccagcg
     1801 ccacgaagac gccgtaggcg gagaaggagc ccaggaagaa gtagtcgcgc tcgcggacct
     1861 cgcggggcag gtccggcttg tccgggtact gggagaagcc gtacttgaag ttcatgtaga
     1921 agacgagcgc caccgtgagc gtgccgagca gcaggatggc ggcccagccg gcccggcggt
     1981 cgttcttcca cagggtgtag agccccacca ggcccaggcc cacgaagagc gcggtggcga
     2041 tgccggccca ctgcccccag tcgcgcgcga actgccagtt gaagtactgc cagaagttgg
     2101 cgagctgggc gaagaagggc gcctgccgcc cgaggttggg ctggcccagc tcgaggatgg
     2161 gcggcttccc gtactgcacc cggttgagca cgtccttgag cgcctggctg aagaacccga
     2221 tcggctcgcc ctcgttgatc ggcgggaact gcgcggcgcg gagcggcagg tagacgtagt
     2281 tgagcgagat gccgaccacc accgccagca ggccgatgta gaccagcggg tcgcggggcg
     2341 agcgccagag cgcgtagatc acggccgcgc ccgagaccaa
//
LOCUS       DATIFF010000922         2762 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1038024, whole genome shotgun sequence.
ACCESSION   DATIFF010000922 DATIFF010000000
VERSION     DATIFF010000922.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2762
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1038024"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..869
                     /locus_tag="VLD58_13545"
     CDS             <1..869
                     /locus_tag="VLD58_13545"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Na+:solute symporter"
                     /protein_id="HSB55381.1"
                     /translation="ASTIIYPTLADVHAAFPNIPATMLGNDIAYPAMLRVLPAGFLGL
                     MIAGMLAAYRSTIETHLNWGTSYLVHDFYRRFLKPGEDEQHYVMVGRLVTALLMLVAT
                     GFTLVLDSARQAFDLMLSVGAGTGLLYLLRWFWWRVNAWSEIAAMVSSFLVAVGFLLA
                     NRAGHAVPSHIALIASVVITTVIWMTTALLTEPTARTQLVQFYRLVRPAGAGWGTIPA
                     EAGVTASPDSLAQSLLGWVLGIAFVYSALFGTGSFLYGRQGQALMWLVVFVVSGAGLL
                     RLVPKMWVKSGG"
     gene            complement(866..1954)
                     /locus_tag="VLD58_13550"
     CDS             complement(866..1954)
                     /locus_tag="VLD58_13550"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside phosphotransferase family
                     protein"
                     /protein_id="HSB55382.1"
                     /translation="MSAPSPGLDILAAYGLESAEVTPAPGGHINLSWMVAPGRYLLQR
                     INPRVFPNGSLVLENVANVTGHLARAARRLGLADPERRVLRLVRTRDGRAGVQDDDGV
                     CWRLLHYIEGARSFEQVTSGALAEQAGKAFGLFQRLLADYDGPPLGEAIPGFHDTRRR
                     LERLESVSHHDMAGRAGSVPNELRFVARREEYAEVLPPLVASGALPRRVVHNDAKVAN
                     VLFDRQTGEALAVVDLDTVMPGTLLSDVGDLLRSAGSTAAEDERDLSRVVLSPGHIER
                     LLAGFLSEAGEILTASERELLIFAGILLTFEQGVRFLSDYLQGDVYYRTTRPHHNLER
                     AQAQFRLVECFEAERRALEQWVSDFRGA"
     gene            complement(1951..>2762)
                     /locus_tag="VLD58_13555"
     CDS             complement(1951..>2762)
                     /locus_tag="VLD58_13555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55383.1"
                     /translation="GATLMDYSVYDAVQAGFERVVFVIRPEMQEVFDAAIGSRYAQRL
                     PVSAVSQRLEDLPPGFTLSGDRTKPWGTGQALLAARAAVTGSFAVLNADDFYGREALV
                     EVAGFLRTPAASETFAVVGYRLEQTASSEGGVNRALLELDRKGSLSHIVEVKNLTLAS
                     PGRFRGEVDSEPRIVPADALVSMNLWGLTSAIFPRLERGFEAFLERNPGPRSEYYLPE
                     AIQEMLSEGGVTVKVLPTQSRWCGMTHPGDRPRVEQFLRERVEAGEYPAEL"
BASE COUNT          437 a          969 c          913 g          443 t
ORIGIN      
        1 tcgcctcgac gatcatctac ccgaccctgg ccgacgtgca cgccgccttt cccaacatcc
       61 cggccacgat gctggggaac gacatcgcct accccgcgat gctccgggtc ctcccggccg
      121 gcttcctcgg cctcatgatc gccgggatgc tcgccgccta ccggtccacc atcgagaccc
      181 acctcaactg gggcaccagc tacctggtgc acgacttcta ccgccgcttc ctcaaacccg
      241 gtgaagacga gcagcactac gtgatggtgg gccggctggt caccgcgctg ctgatgctgg
      301 tcgcgaccgg cttcaccctg gtactcgaca gcgcccgtca ggcctttgac ctgatgctgt
      361 cggtcggcgc gggcaccggc ctgctctacc tccttcgctg gttctggtgg cgcgtcaatg
      421 cctggagcga aatcgcggcg atggtctcga gcttcctggt ggcggtgggc ttcctgctcg
      481 ccaatcgcgc ggggcatgcc gtcccgtccc acattgccct catcgcgagc gtcgtcatca
      541 ccacggtgat ctggatgacg acggcactgc tgaccgagcc gactgcacgc acccagctgg
      601 tccagttcta ccggctggtc cgccccgccg gcgccggctg ggggaccatc cccgccgagg
      661 cgggggtgac cgcctcgcct gacagcctgg cgcaatccct gctcggctgg gtgctgggga
      721 tcgccttcgt ctattcggcg ctgttcggaa ccggcagctt cctgtacggg cgccagggcc
      781 aggcgctgat gtggctggtg gtattcgtgg tgagcggcgc cggactgctg cgcctggtgc
      841 cgaagatgtg ggtaaagagc ggaggctagg cgccccggaa gtcgctgacc cactgctcca
      901 gggcgcggcg ctcggcctcg aagcattcga ccaggcggaa ctgcgcctgg gcccgctcga
      961 gattgtggtg gggtcgggtg gtgcggtagt agacgtcgcc ctgcaggtag tcgctgagaa
     1021 accggacgcc ctgctcgaaa gtgagcagga tccctgcgaa gatcagcagc tcccgttcgg
     1081 aggcggtgag aatctccccc gcctccgaga ggaatcccgc cagcagccgt tcgatgtgcc
     1141 cgggtgagag caccacgcgc gacaggtccc gttcatcctc ggccgccgtg ctccccgccg
     1201 accggagcag gtctcccaca tcactgagca acgtgccggg catcaccgtg tcgagatcga
     1261 ccacggcgag cgcttctccg gtctgccgat cgaacaggac gtttgccacc ttggcatcgt
     1321 tgtgcaccac ccgccggggc aatgcgccgc tcgcgaccag gggcggaagc acctcggcgt
     1381 attcttcgcg ccgagcgacg aaccggagct cgttaggcac actgcctgcc cgtccggcca
     1441 tgtcgtgatg cgagacggat tcaagccgct ccaggcgccg gcgagtgtcg tggaacccgg
     1501 ggatggcctc accgagcggc ggcccgtcat agtcggccag cagccgctga aagagaccga
     1561 aggccttccc ggcctgctcc gccagcgccc ccgatgtcac ctgctcgaag ctccgcgcgc
     1621 cctcgatgta atggagcagg cgccagcaca ccccatcgtc atcctgcact ccagctcgac
     1681 cgtcccgggt gcgcaccagg cgcagcaccc gccgctccgg gtcggcgagc cccagcctcc
     1741 tggcggcccg ggcgaggtgc ccggttacgt tggcgacgtt ttcaaggacg agggagccgt
     1801 tcgggaagac cctggggttg atgcgctgaa ggagataccg tccgggcgcg accatccagg
     1861 agaggttgat gtgaccgccc ggagcgggcg ttacctccgc gctttcgaga ccgtaggccg
     1921 cgaggatatc gaggccggga ctgggcgcac tcacagctcg gcaggatact cgccggcttc
     1981 gacgcgctcg cggaggaact gctcgaccct gggccggtcg ccaggatggg tcatcccgca
     2041 ccagcggctc tgggtcggca ggaccttcac ggtaacgcct ccctccgaga gcatctcctg
     2101 aatcgcttcc gggaggtagt actccgagcg gggcccgggg ttgcgctcga gaaaggcctc
     2161 gaagccccgc tcgagccggg ggaagatcgc cgaggtgagt ccccagagat tcatggagac
     2221 cagcgcgtcg gcggggacga tccggggctc ggagtcgact tcaccccgaa agcgtcccgg
     2281 cgaagcgagc gtcaggttct tcacttccac gatgtgcgac agagagcctt tgcggtccag
     2341 ttccagcagc gcccggttca ccccgccttc gctgctcgcc gtctgttcca gccggtatcc
     2401 caccaccgcg aaggtctcgc tggcggcagg cgtgcggaga aaaccagcca cctcgaccag
     2461 ggcctcgcgg ccgtagaaat catcggcgtt gagcaccgcg aaggagccgg tgaccgcggc
     2521 acgggcggcc agcagcgcct ggccggtgcc ccacggcttg gtgcggtcac cggacaaagt
     2581 gaaccccggg ggcagatcct cgagccgctg gctcaccgcg gacaccggaa gccgctgggc
     2641 gtaccgggag ccgatggccg cgtcgaatac ctcctgcatc tccggacgga tcacgaagac
     2701 gacccgctcg aagccggcct ggaccgcatc gtagaccgag tagtccatca gggtcgcgcc
     2761 cc
//
LOCUS       DATIFF010000923         1782 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1499379, whole genome shotgun sequence.
ACCESSION   DATIFF010000923 DATIFF010000000
VERSION     DATIFF010000923.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1499379"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            366..1553
                     /locus_tag="VLD58_13560"
     CDS             366..1553
                     /locus_tag="VLD58_13560"
                     /inference="COORDINATES: protein motif:HMM:NF024940.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSB55384.1"
                     /translation="MNDELAARHRAIGLRLAGRPVKQICSALGRSEAWFHKWWGRYLQ
                     AGPDGLYDLTRAHHHVAQRVSPELERAILSIRRRLQAHASPATRYSLTGAPAIRAELK
                     ALGIRPLPCERTIERVLQRHGVTAPRVRLAPLLPRQDYPGPQARASNQLHEVDLVGPV
                     YLKGRSHRYYIWVGKDAFDGAACLRLANSRRMDEVLAFLGECWKDLGLPEQVQLDNAR
                     ELSGWGPAARRLSRVIRLCLHFGVEPVFIPAGEPQFNGGVENFNGWFQPRLFDRRYAR
                     PGDLRRELARLQEAVNMQHVHPRLGGRTPAQHRRGLRLRKLPASFVVPTGRLKLAVGR
                     VTFIRRVSPAGTVSVLSQSYRVGKRHRGLYLRLVVDTGRGWLTAYLNGRVLKRWPYKL
                     LND"
BASE COUNT          271 a          631 c          588 g          292 t
ORIGIN      
        1 gtagtcgtcc accgtatgca tgtcctcgcc tccgcacggg tgggagattc ccgagggaat
       61 ccaccctacg gaggaggggg ctacggtggg tccaaattac ttgaccatcg gggcctcagg
      121 tgggcccgga ttgcttgacc actgccatca ccgcgatctt cggttgctgc gaaccgacag
      181 ctcatcgtag agctttttcc gacagctcat cgtagagctt cgcgcttccc ggaccgacag
      241 gtcatcgtgg agatccctgg cggcaccggc acaccttccc gggactcggc cttttgcccg
      301 gtcaccagcc gggcctaaaa cgtcctccgc gggcaaccgc cagcggccgc accgcggagg
      361 acaccatgaa tgacgaactc gcggcgcgcc accgcgccat cggtctccgc ctcgccggcc
      421 ggcccgtcaa gcagatctgc tcggccctgg gccgctccga ggcctggttc cacaagtggt
      481 ggggccgcta cctgcaggcc ggccctgacg gcctctacga cctgacgcgc gctcaccatc
      541 acgtcgccca gcgcgtctcg cccgagctgg aacgggccat cctttccatc cgtcggcggc
      601 ttcaggccca tgcctcgccg gccacccgct acagcctgac cggagccccg gccatccgcg
      661 ccgaactcaa ggccctgggg atccgcccac tcccgtgcga gcggaccatc gagcgcgtgc
      721 tccagcgcca cggcgtgacc gcgccgcggg tccgcctcgc cccgctactg ccgcgccagg
      781 actatcccgg tccgcaggcc cgggcctcca accagctcca cgaggtcgat ctggtcgggc
      841 cggtctacct caagggccgc agtcaccgct actacatctg ggtcggcaag gatgccttcg
      901 acggcgccgc ctgcctgcgc ctggccaact ctcgccgcat ggacgaggtc ctcgccttcc
      961 tcggcgagtg ctggaaggac ctcggtctcc ccgagcaggt ccagctcgac aacgctcgcg
     1021 agctgtccgg ctgggggccg gcggcacgcc gcctgtcgcg ggtcatccgg ctctgcctgc
     1081 acttcggcgt cgagccggtg ttcatcccgg ccggggagcc gcagttcaac ggcggggtgg
     1141 agaacttcaa cggctggttc cagccgcggc tgttcgaccg ccgctacgcg aggccgggcg
     1201 acctgcggcg ggagctggcg cggctgcagg aggcggtcaa tatgcaacac gtccacccgc
     1261 ggctgggggg ccggacgccg gcacagcatc gccggggcct gcggctgcgg aagctgcccg
     1321 cgagcttcgt ggtgccgacg gggcgcctga agctggcagt cggacgtgtg accttcatcc
     1381 ggcgggtgag cccggccggg acggtgagcg tgctcagcca gtcgtatcgg gtgggcaagc
     1441 ggcatcgggg gctgtacctg cggctggtgg tggacaccgg gcgtgggtgg ctgacggcgt
     1501 acctgaacgg tcgcgtgctg aagcgctggc cctacaagct cctgaacgac taaccgacac
     1561 ctaaacccgc ggccgctggc ggtccccacc gacattcaag gaggtgatga ggtggcggaa
     1621 gaaataacca ccgggctcta cgatgagctg tcggttcgca ccttgttttt ccagggattc
     1681 gcgagactcg gcggagcttt tcgacctccg cgaacacgct atgagatcgc gaaagcctca
     1741 cgaaactctg atttcctcgg gaaattgtgg ctcggctttg gc
//
LOCUS       DATIFF010000924         1649 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_269639, whole genome shotgun sequence.
ACCESSION   DATIFF010000924 DATIFF010000000
VERSION     DATIFF010000924.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_269639"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..373
                     /locus_tag="VLD58_13565"
     CDS             <1..373
                     /locus_tag="VLD58_13565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55385.1"
                     /translation="PLFRYLTVRNILIGGPMTRSTLFDRLNQELEAFGKKAQSALDEG
                     KLQIELLRLRRKQDNAARDLGLMVHRRERGGEVDQRRIDALLLRLDDHAAEITRLEAQ
                     VQEARRQRSERRAQPTAPTEV"
     gene            complement(370..1074)
                     /locus_tag="VLD58_13570"
     CDS             complement(370..1074)
                     /locus_tag="VLD58_13570"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HSB55386.1"
                     /translation="MPRPSVIAHRGASGYEYENSRAAFRRALMLDADGVELDVHATSD
                     GAIIVHHDPEIPGVGPIGCLTRDQARQLRLRNGELLPLLSDILDLVGDKDVWVEVKSL
                     PEQHDHQLLSALDAGPAPERYAVHGFDHRIIRRLGERRPGLRRGILLTARLDDPISAM
                     AGVGATTLWQEWTQVDQDLVTRVHAAGSTVIAWTVNEIGDLERMARLGVDGLCGNYPD
                     RIRVAIAARVEEGSRV"
     gene            1131..>1649
                     /locus_tag="VLD58_13575"
     CDS             1131..>1649
                     /locus_tag="VLD58_13575"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSB55387.1"
                     /translation="MSPSPVPESSGDPALVAAYRAGDERAATELVRRHAPAIGRFLYS
                     SGAFAGDIEDLVQETLFRAFRGLDRWRAESSFRSWLFTIAGNLMRDAYRRRKGRQLVP
                     LDDRDLPDRADPHAELAAGELEERVRVEIGRLPRLQREVFLLRAQEGAAYEDIAAALG
                     TTPGAARVHYHHA"
BASE COUNT          252 a          575 c          579 g          243 t
ORIGIN      
        1 cccccttttt cgctatctta cggtcaggaa catcctcatc ggaggcccca tgaccaggtc
       61 caccctgttc gaccggctca accaggagct cgaggcgttc ggcaagaagg cccaatccgc
      121 gctcgacgag ggcaagcttc agatcgagct gctccgactc cggcgaaagc aggacaatgc
      181 ggcacgggat ctgggcctga tggtccatcg acgggagcgg ggcggggagg tggaccagcg
      241 tcgcatcgac gccctgctgc ttcggctgga cgatcacgcg gcggagatca cccggctgga
      301 ggcgcaggtg caggaggccc gccgtcagcg ctccgagcgg cgcgcccagc ccacggcccc
      361 gaccgaggtc tagacccggg agccttcctc gacccgcgcg gcgatggcca cccggattcg
      421 gtccgggtag ttgccgcaca acccgtccac ccccagccgg gccatccgct ccaggtctcc
      481 gatctcgttc accgtccagg cgatcacggt ggagccggcg gcatgcaccc gggtcaccag
      541 atcctgatcg acctgggtcc actcctgcca caacgtcgtg gcgccgacgc cggccatcgc
      601 gctgatcggg tcatccagac gggcggtcag gaggatgccg cggcggaggc cgggccgccg
      661 ttcgcccagg cgccggatga ttcgatggtc gaagccgtgg acggcgtagc gctcgggggc
      721 cgggccggca tccaacgccg agagcagctg gtggtcgtgc tgctcgggca gggacttcac
      781 ctctacccag acgtccttgt cgccaaccag gtcgaggata tcggacagca gagggagcaa
      841 ctccccgttt cgaagccgga gctggcgtgc ctggtcccga gtgaggcacc cgatcggtcc
      901 gaccccgggg atctccgggt cgtggtggac gatgatcgcc ccgtcgctgg tggcgtgcac
      961 gtcgagctcg accccatcgg cgtccagcat cagcgcccgg cggaacgcgg cgcgggagtt
     1021 ctcgtattca tatcctgagg cgccgcgatg ggcgatcacg ctagggcgtg gcatggcgct
     1081 aagatagcgc cgcttaacga aatcggacac ccgacgtcag ccacatccgg atgagtccct
     1141 cccccgtgcc ggagtcttcg ggcgatcccg ccctggtcgc cgcctaccgg gccggggacg
     1201 agcgggcggc caccgagctg gtccggcgcc acgcgccggc aatcggccgg ttcctctaca
     1261 gttcgggggc gttcgccggt gacatcgagg acctggtgca ggagacgctg ttccgcgcgt
     1321 tccggggcct cgaccggtgg cgggccgaat cctccttccg gagctggctc ttcaccatcg
     1381 ctggcaacct gatgcgggac gcctaccggc gtcggaaagg tcggcaactg gtgccgctgg
     1441 acgaccggga tctgcccgac cgggccgatc cccacgccga gctcgccgcg ggggagctgg
     1501 aggagcgggt gcgggtggag atcggcaggc tgccccgtct gcagcgggag gtcttcctgc
     1561 tccgggccca ggagggcgcc gcgtacgagg acatcgccgc ggcgctcggc accacccccg
     1621 gggcggccag ggtgcattac catcacgcg
//
LOCUS       DATIFF010000925         1011 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_421401, whole genome shotgun sequence.
ACCESSION   DATIFF010000925 DATIFF010000000
VERSION     DATIFF010000925.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421401"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1011
                     /locus_tag="VLD58_13580"
     CDS             <1..>1011
                     /locus_tag="VLD58_13580"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB55388.1"
                     /translation="VGRETQRVRRDGTLLDVSISTAPLRDARGEIVGVSAAYVDLTTR
                     IKLEEQLRQSQKMEAIGRLAGGIAHDFNNILTAILGFAGRVSQAMPPDDPRQADLREI
                     ITSGESAAGLTKQLLTFSRPHAVVPRVVEVGDVARGMEAMLRRVLGERVDLRLALAPD
                     CGRVRVDPHHLEQVLLNLCINAKDAMPRGGRLVIETAPVDLEHAYVDQHADLLPGSYV
                     MLAVSDTGIGMDRDTQARIFEPFFTTKGPGVGTGLGLATVYGIVRHAGGSILVYSEPG
                     RGSTFKVYLRRTEDSLTPPPPPTPAPPMAPAVGQRILVVEDNPSVRALVTALLEDEGY
                     RVT"
BASE COUNT          165 a          343 c          346 g          157 t
ORIGIN      
        1 gtgggccgtg aaactcagcg ggtacggcgg gatggcaccc tgctcgacgt ctccatctcg
       61 accgcgccgc tgcgcgacgc tcgaggtgaa atcgtcggtg tgtcggcggc gtatgtcgac
      121 ctgacgaccc gcatcaagct cgaggagcaa ctgcggcaat cccagaagat ggaggccatc
      181 gggcgcctcg ccggcggcat cgcgcacgat ttcaacaaca tccttaccgc gatcctgggg
      241 tttgccggcc gggtgagcca agccatgccg ccggatgatc cccgccaggc ggacctccgt
      301 gagatcatca cgagcgggga gagcgctgcc gggcttacca agcagcttct caccttcagc
      361 cggccgcacg ccgtggtgcc gcgggtggtg gaggtgggcg acgtcgcccg cgggatggag
      421 gcgatgctcc ggcgggtgct gggcgagcga gtcgatctcc gcctggctct cgctcccgac
      481 tgcggtcggg tccgggtcga cccccatcac ctggaacagg tcctcctcaa cctgtgcatc
      541 aacgcgaagg atgcgatgcc gcgcggcgga cggctggtca tcgagaccgc tccggtggac
      601 ctggagcatg cctacgtcga ccagcacgcc gacctgctgc cgggctccta cgtcatgctg
      661 gccgtgagcg acaccggaat cggcatggac cgagataccc aggcgcggat cttcgagccc
      721 ttcttcacca cgaagggccc tggcgtgggc accggactcg ggctggcgac ggtttacgga
      781 atcgtccgcc atgccggcgg cagcatcctg gtctacagcg agccgggtag gggctccacg
      841 ttcaaggtct atttgcgcag gaccgaggac agcctgacgc cgccaccccc gccgacgccg
      901 gcacccccga tggcacccgc ggtcggtcaa cgaatccttg tcgtggagga caacccgtcg
      961 gtacgcgcgc tggtgacggc gctgctggag gacgaaggct accgggtcac c
//
LOCUS       DATIFF010000926         1023 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2268231, whole genome shotgun sequence.
ACCESSION   DATIFF010000926 DATIFF010000000
VERSION     DATIFF010000926.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2268231"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1023)
                     /locus_tag="VLD58_13585"
     CDS             complement(<1..>1023)
                     /locus_tag="VLD58_13585"
                     /inference="COORDINATES: protein motif:HMM:NF040218.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55389.1"
                     /translation="LQQGALDVDAAGWDQYTGYGLIRSAESMTSAAIITTPPVLAVSP
                     ASRRDSADAGASGVRNDSATVSLSGTNASTTAWTASKKAAWITLTTASGTGSGKVRWS
                     RSAASLSAGLYIDTITVTASGATGSPASVVDSFVVKLVTTPLTIAVSPTSRWDSVRTG
                     FSGLVYDSATVSLSGMGASTAVWSATHSKSWLVISNPSGTGSGQLRWTSNPSGLLAGL
                     YVDTLVVSLSGAAGSPTRIVDTLKITDKVTATGTKGRKTVSNGSSKGNSVTEPDSALV
                     VADRETWQAATTAPWIELVTSGGIGDGMVRWNVHLERAAWGISSDSIVVTAGQGTARR
                     VLLVID"
BASE COUNT          157 a          359 c          350 g          157 t
ORIGIN      
        1 tagtcgatca ccagcagaac ccgccgtgcc gtgccctgtc ccgccgtcac cacgatggaa
       61 tccgaggaaa tgccccaggc ggcgcgctcg agatggacgt tccagcgcac catcccgtcg
      121 ccgatcccgc cgctggtgac cagttcgatc cagggggccg tggtcgcggc ctgccacgtc
      181 tcgcgatcgg ccaccaccag cgcggagtcg ggctcggtga ctgaattgcc cttcgagctc
      241 ccattggaaa ccgtcttccg ccccttggtg ccagtagccg tgaccttgtc ggtgatcttc
      301 agcgtgtcca cgatccgcgt cggtgaaccg gccgccccgg agagcgagac gacgagcgtg
      361 tcgacgtaga gcccggccag gagcccgctc gggttggagg tccagcgaag ctgtccgctc
      421 ccggtccccg aggggttgga gatcaccagc cacgacttcg agtgggtggc gctccagacg
      481 gccgtcgagg cccccatccc gctgagcgag acggtcgccg aatcgtagac cagcccgctg
      541 aagccggtgc gaaccgaatc ccaccggctg gtcggggaga ccgcgatggt gagcggcgtc
      601 gtcaccagct tgaccacgaa ggaatccacc acggaagcgg gactgccggt ggcgcccgag
      661 gcggtgacgg tgatcgtgtc gatgtagagg cccgccgaga ggctggcggc gctccggctc
      721 cagcggacct tcccgctgcc ggtgccgctg gcggtcgtca gcgtgatcca cgccgccttc
      781 ttcgaggcgg tccaggctgt ggtggaggcg ttcgtcccac tcaggctcac ggtcgcggag
      841 tcattccgga cgcccgaagc tccggcgtcg gccgaatccc ggcgcgaggc ggggctcacc
      901 gcaagcaccg gtggcgtggt gatgatggcg gcagacgtca tcgactccgc cgagcggatc
      961 agcccgtacc cggtgtactg atcccacccc gcggcgtcca cgtcgagcgc gccctgctgc
     1021 agc
//
LOCUS       DATIFF010000927         3657 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2115303, whole genome shotgun sequence.
ACCESSION   DATIFF010000927 DATIFF010000000
VERSION     DATIFF010000927.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3657)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3657)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3657
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2115303"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1554)
                     /locus_tag="VLD58_13590"
     CDS             complement(<1..1554)
                     /locus_tag="VLD58_13590"
                     /inference="COORDINATES: protein motif:HMM:NF012632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55390.1"
                     /translation="MTRRSPYLNAATTLLVGALLTTCTTELAPTGAIVVRLDKGAAWP
                     DTLAVAEIASLAVSVTGPDQQVVTGVTLVWGSTDSSVVTVTGAATALHAVVTSRRTGE
                     AAIVVRVAQTGFEPVELRAPLVVRERGADSLLSVGDVDTIGLALQRVDPSFLTGATVT
                     WGSSDPSVVGVSALASDSTRAVITGRFSGTAQVTAAVQNQLGRSTFQLPVTVLPLEIS
                     ELPAWAPTVNRTNTAAFAVQVKDALGRIRTGVKVQWHSTNETAFTVDSLGTVVGKSRG
                     GGELVASVGVAPFQVVEHRAPLQVTEKWRAVTAGGDHTCAIAALDGTGYCWGSNAQGQ
                     LGLGFAASALGQAAVPRTIATSHKFTELEAGAAHSCGREGVQTRLCWGARDRGAVGDG
                     VCIPGGMGSTCFPSVESPVTIVSGGIVGGVQVRLDQLIVGGTFSCIVTVNGGSGSFAS
                     RDLRCWGTADDFGRGISFPGSGFADSAVILQPGLSGDADVTDVSTGGVHLCTRTDDIW
                     WVRCMGINDH"
     gene            complement(1575..2744)
                     /locus_tag="VLD58_13595"
     CDS             complement(1575..2744)
                     /locus_tag="VLD58_13595"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HSB55391.1"
                     /translation="MRAVAGLMLVTVAAAPLAGQRMSRMPVEAANLVVQVLASGGDDE
                     EVGAGIVVAASNRIVIATAAHVVRAAQQGGSVRVVFQFARNDTVEAKVDQVDRELDLA
                     VLSLARDGRSPIQFAFDRGGDPGALEIGGLVVPLGCPERRCWEPPVSGDRVISASSRR
                     VRFESFFVSPGSSGGALFNQQWEVVGLVTEKNTQDGIAVGMSEVADRLRKWGYAVQLG
                     PTRIPRAGYRTRLSLVGLAPTSGDLTQSGRWPSGRLALLLRGQERIGWHLTAIRLAPQ
                     DLKVTGGMVGTSVALRAGRLGIAPFGEVGVARVNGRFNAGSYFIQGANGPVAVPIWQT
                     VTNDVIGVGVGADLEFLIAPHIAVSGLVGHWSFRTDAPLPSLPDVFVGAGLKLAF"
     gene            complement(2741..>3657)
                     /locus_tag="VLD58_13600"
     CDS             complement(2741..>3657)
                     /locus_tag="VLD58_13600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55392.1"
                     /translation="GVLLALAAVVLWKGSQPVARAPVHAEFRAQGVWLRLGGATAPWD
                     RALTLGSLGISGLEEVSLPAQGKNPARTVATPTLFLKAVHPDSGGISIDPIRLPAGNV
                     IAVRTTGSAGLVQLTIGDSLPPIPVSVSGPIVVSLPDEPADTIPFRIDQIQLAAPRGA
                     LDFELGFADVGPARPLVPLEVIGVSFQDVNRFRDEEQASDQAVSTIESGTFGLGVGNR
                     AAHTLTKGEDLPLHGFRGAIRDVAVDSQAVALTLEGTVDSLPASLGSIPSKLQVFWSA
                     HPVASGGAGLVYLALFVLVGLYWKRGTR"
BASE COUNT          589 a         1351 c         1215 g          502 t
ORIGIN      
        1 gtggtcgttg atgcccatgc accggaccca ccagatatcg tcggtccggg tacagagatg
       61 gacgccgccg gtcgagacgt cggtgacgtc ggcatccccc gagaggcccg gctgcagaat
      121 cactgccgag tcggcaaacc cagacccagg gaaggatatc ccccggccga agtcgtctgc
      181 cgttccccag caccgcaagt ctcggctggc gaaactcccc gagccgccgt tgaccgtgac
      241 gatgcagctg aacgtgccgc cgacgatcag ctgatccagc cggacctgca ctccgcctac
      301 gatcccaccg ctcacgatgg tcacgggcga ttccaccgag gggaagcagg tggagcccat
      361 gccaccgggg atgcacacgc cgtcccctac cgccccgcga tccctcgcac cccagcagag
      421 ccgggtctgg accccctcgc gcccgcagct gtgcgccgcg cctgcctcga gctccgtgaa
      481 cttgtgcgac gtggcgatgg tgcgcggcac ggctgcctgg ccgagcgcgc tcgccgcgaa
      541 gcccaacccc aactgcccct gggcgttgct gccccagcag taacccgtgc cgtccagcgc
      601 cgcgatcgcg caggtatggt cccccccggc ggtgaccgcc cgccactttt cggtcacctg
      661 gagtggcgcg cgatgttcga cgacctgaaa cggcgcgact ccgacactgg ccaccagctc
      721 gccccccccg cggctcttgc ccaccacggt gccgagcgaa tcgaccgtga acgccgtctc
      781 gttggtggag tgccactgca ccttgacccc ggtcctgatc cggcccagcg cgtccttcac
      841 ttgcaccgcg aacgccgccg tgttggtccg gttgaccgtc ggcgcccatg ccggcaactc
      901 gctgatctcg agcgggagca cggtcaccgg tagctgaaac gtcgagcggc cgagctggtt
      961 ctggaccgcc gcggtgacct gcgccgtgcc gctgaaccgc ccggtgatca cggcccgggt
     1021 ggaatccgac gccagggcgg agacgccgac gacggaagga tcgctcgagc cccaggtcac
     1081 ggtggcgccc gtgaggaagc tcgggtctac gcgctgcagt gccaggccga tcgtgtccac
     1141 gtcgcccacg ctcagcaacg aatcggcgcc ccgttcccgg acgacgagcg gcgcccgcag
     1201 ctcgacgggc tcgaaaccgg tctgggcgac ccgcaccacg atcgcggcct ctccggtgcg
     1261 tcgactggtg acgacggcgt gcagggccgt cgcggcgccg gtcacggtca ccaccgagga
     1321 atcggtggag ccccacacca gcgtgacgcc agtgacgacc tgctggtcag ggcccgtgac
     1381 agacacggcc agcgaggcga tttccgccac cgccagggtg tccggccagg cggcgccttt
     1441 gtcgagacgc accacgatcg ccccggtggg cgccagctca gtggtgcagg tggtcagcag
     1501 cgccccgacg agcagcgtcg tcgcagcgtt caggtacggc gatcgtctgg tcatgaatcg
     1561 agcgtgcctc tgggttagaa ggcgagcttg aggcccgccc cgacgaacac gtcgggaagc
     1621 gacggcagcg gcgcatcggt gcggaagctc caatgtccca cgagccctga gacggcgatg
     1681 tggggggcga tcaggaactc caggtccgcc ccgacgccga cgccgatcac gtcgttggtc
     1741 accgtctgcc agatggggac cgccaccggt ccattcgcgc cctggatgaa gtagctcccg
     1801 gcattgaagc gtccgttcac ccgggcgacg ccgacctccc cgaacggcgc gatcccgagc
     1861 cgtccggccc ggagcgcgac gctggtcccc accatgcctc cggtcacctt caggtcctgc
     1921 ggcgcgagac ggatggccgt caggtgccat ccgatccgct cctggccccg gagcaggagc
     1981 gcgagtcgcc cactcggcca ccggcccgat tgggtcaggt cgcccgaggt cggcgccagc
     2041 ccgaccagac tgaggcgagt gcggtacccg gcacggggga tgcgcgtcgg accgagctgg
     2101 acggcatagc cccatttccg caaccggtcg gccacctcgc tcatgccgac cgcgatgccg
     2161 tcctgggtgt tcttttcggt caccagcccc accacctccc actgctggtt gaacagcgcg
     2221 ccccccgagc tccccgggct cacgaagaac gactcgaagc gcacccggcg cgagctcgcg
     2281 ctgatcacgc ggtcaccgct caccggtggt tcccagcagc gccgctcggg gcaccccagc
     2341 ggcaccacca ggccaccgat ctcgagcgcc ccagggtctc ctccgcggtc gaacgcgaat
     2401 tgaatgggag agcgtccatc acgcgccagg ctcagcaccg ccaggtcaag ctcgcggtcc
     2461 acctggtcga cctttgcctc gacggtgtcg ttgcgggcga actggaacac cacccggacg
     2521 cttccgccct gctgggccgc gcggaccacg tgggccgcgg tcgcgatgac gattcgattg
     2581 gatgccgcga ccacgatacc ggccccgacc tcctcgtcat cccccccgct ggccagcacc
     2641 tggaccacca ggttggcggc ctccactggc atgcgtgaca tccgctggcc cgccagcggg
     2701 gcagccgcga cagtgaccag catcagaccg gcgaccgctc tcatcgtgtg cccctcttcc
     2761 agtagagccc gaccagaacg aacagcgcga gatagacgag gccggcgccg ccagaggcca
     2821 cgggatgcgc cgaccagaag acctgcagct tgctcgggat cgagccgagc gaggcgggca
     2881 gggaatcgac ggtgccctcg agagtgaggg ccacggcctg ggagtcgacc gcgacgtcgc
     2941 ggatcgcgcc gcggaagccg tgtaggggca ggtcctcccc cttcgtcagg gtatgagcag
     3001 cccggttgcc gacgccgagt ccgaatgtgc cgctctcgat ggtcgacacc gcctgatcgc
     3061 tggcctgctc ctcgtcgcgg aaccgattga cgtcctggaa gctcacgccg atgacctcga
     3121 gcggtaccag gggacgcgcc ggccccacgt ccgcgaagcc cagctcgaaa tcgagcgctc
     3181 cgcggggagc cgcgagctgg atctgatcga tgcggaacgg aatcgtgtcc gccggctcgt
     3241 ccggcaggct cacgacgatc ggcccgctca ccgacacggg gatgggcggg agcgagtctc
     3301 cgatggtcag ctgcaccagg ccggcggacc cggtggtccg cacggcgatc acgttgcccg
     3361 ccgggaggcg aatcgggtcg atgctgatcc cgccggaatc cgggtgaacc gccttgagga
     3421 acaaggtcgg cgtggcgacg gtgcgcgcgg ggttcttgcc ctgggcggga agcgagactt
     3481 cctcgagacc cgagatcccg agggatccca gggtcagcgc gcggtcccat ggcgccgtcg
     3541 cgccccccag ccggagccac acgccttgcg cgcggaactc ggcatggacg ggtgcacgcg
     3601 ccaccggctg cgagcccttc cagagcacga ccgcggccag agccaggagc acacccc
//
LOCUS       DATIFF010000928         1092 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1961207, whole genome shotgun sequence.
ACCESSION   DATIFF010000928 DATIFF010000000
VERSION     DATIFF010000928.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1961207"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..229
                     /locus_tag="VLD58_13605"
     CDS             <1..229
                     /locus_tag="VLD58_13605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55393.1"
                     /translation="QDRVLYATDFALREGDPAAAARSLQETHNRDWAFFARGDPMAYA
                     GHPTRGLALPDGVLRKIFRENALRWLPGLAA"
     gene            complement(314..835)
                     /locus_tag="VLD58_13610"
                     /pseudo
     CDS             complement(314..835)
                     /locus_tag="VLD58_13610"
                     /inference="COORDINATES: protein motif:HMM:NF019542.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid pRiA4b ORF-3 family protein"
BASE COUNT          172 a          387 c          377 g          156 t
ORIGIN      
        1 ccaggaccgc gtcctctacg cgaccgactt cgccctccgc gagggcgacc cggcggccgc
       61 ggcgcggtcg ctccaggaga ctcacaaccg cgattgggcc ttcttcgccc gcggcgaccc
      121 gatggcgtac gcgggccacc cgacgcgggg gctggccctc cccgacgggg tcctgcggaa
      181 gatcttccgc gagaacgccc tgcgctggct ccccggactc gctgcgtgag cggacgcccc
      241 gggctcgaat caggcgcttg ggggcgggtc ggccgcgccc ggcccgattc gatggcggaa
      301 aaggccagcc ctctcatcga tccggacggc ccacgtcctg gaccgaaccg gcgccggacc
      361 gggccggatc acgccgcgcg cgagcgctcg cggtccagcg cttcggccca tctctcttgg
      421 gcgaggcgca gacgcacgag gcgccgggcc tcggcccgcc gacgcagacc gggtacgctt
      481 gcttcgactc cgcctcgaga ccgtgctcga tccgcacctc atgttgccac cggtcgccga
      541 agtcctactc ggagaggaac cgttcgttgc agcggaactg aaagtcgatg agccgaacct
      601 ggcgtgcatc ctgagagacc ccgaggccac cctcccggct gacgccatag tcccggccgt
      661 ggatgcgaaa gcggtggaga tgggtgtcgg tccagccgaa ggcgatctgg atgatgtcgt
      721 ggaactgggc gagtgagcgg tcactgcgga ccaggagccg ccgcccgatc aaggggctga
      781 tctggcggat ccagagatga aactggtaga tcggagaatc ggtcggattg gccatgacct
      841 ggaacagcgt aaccgaggcc gggcccgacg gtcagcaccc ggtttggccc ggtctccaag
      901 ttcaccggca agacgatgga ccgtcccggc tgaaacaagc tcacgcagag catcgaggcc
      961 gggaaggagt cggcgatcgt cgtctggcgg ctcgatcgtt tgcaggcagc gccgatccta
     1021 ccgaccctcg cctgacgcct ccgcctggtg ctgcgcctcc ggtggccgcc cctcggcggc
     1081 cccggtcgcc ga
//
LOCUS       DATIFF010000929         3696 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2115704, whole genome shotgun sequence.
ACCESSION   DATIFF010000929 DATIFF010000000
VERSION     DATIFF010000929.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3696
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2115704"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..553)
                     /locus_tag="VLD58_13615"
     CDS             complement(<1..553)
                     /locus_tag="VLD58_13615"
                     /inference="COORDINATES: protein motif:HMM:NF014389.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HSB55394.1"
                     /translation="MAPETPVIAATLDTVTRIVVVAALAYAAVVALTHWAVRRRSIGP
                     FGPWPRLVRRISDPVLLPLERRVIRLGGNPQDAPLWLLGGVIVGGLVLVSLVRWLIGM
                     ALNLTALAGAGPRIWLHVAVGGVFSLLMAAIFVRVIASWFGISPYARWMRPLVLLTDW
                     LIEPIRRFLPPVGMIDLSPMVAWL"
     gene            complement(543..998)
                     /locus_tag="VLD58_13620"
     CDS             complement(543..998)
                     /locus_tag="VLD58_13620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55395.1"
                     /translation="MRHRAVGVLLAALWAASGCGGGANPEARPAAARARTGPEADADA
                     LGREVFELVDRAVDYRGSHRGRPAGSLRQMGVDSLTPATARVLVSVEREPVVTVQFRR
                     TDSREIVACRGDSHILEEATLNGGRFTLMCTSRSGAQRPMQVGGLDDGS"
     gene            complement(995..1972)
                     /locus_tag="VLD58_13625"
     CDS             complement(995..1972)
                     /locus_tag="VLD58_13625"
                     /EC_number="1.14.19.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045300 - acyl-[acyl-carrier-protein]
                     desaturase activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP desaturase"
                     /protein_id="HSB55396.1"
                     /translation="MSTPTASERELAAKMEVLRDLEDRVRELMESHERKRELWYPSEL
                     LGPDPDTCPDEFHGRLRAQAEGIPDPVRAALALNMLTEEGLPHFHRLLAVYLGDSSYW
                     RLWNNLWTAEEDRHGAVLHDYCRDTRLFDQRKIEEMQFEYLRRGFHPEWDKDPYRVFV
                     YTTVQERATQFSHSETGRIVAEYEPRLGEVLSHVAKDEARHYAFYRSVFEEILQRDPD
                     QALHSAAFILPAIDMPGVTMPGFKELADVIRRTGIYGPRDYLRIVQEQIRYWKIESLQ
                     GLGELGRKAQEKIMEIPARLKRIAEHMETRSRSKTFSFEVVFNREFAME"
     gene            complement(2084..2503)
                     /locus_tag="VLD58_13630"
     CDS             complement(2084..2503)
                     /locus_tag="VLD58_13630"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB55397.1"
                     /translation="MSELTIREMEQDGDFAAWYSELLEQEEDPSGWSGTLDQRYLILS
                     NEIGDWIGGLRYWLRGGVAHLVDVVVLPQERHRGHAHRLLAAFEQRAVDSGAHLAEFW
                     TDDNRSEGLLAALGWRRIFERDNYVGRRRWALMEKSL"
     gene            2728..3186
                     /locus_tag="VLD58_13635"
     CDS             2728..3186
                     /locus_tag="VLD58_13635"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HSB55398.1"
                     /translation="MAETAPGTDAAARPVVVRCVFCQTPNRVDLARLAAGPKCGNCNR
                     PIRLDRPIPVGEDSFDQTIAGASVPVVVDCYADWCGPCRVMAPTLDDFAQRHAGEVLV
                     VKLDTDASPTLSTRLGIRGIPTLIAFLQGKERGRHVGIADLRTLEKLAGV"
     gene            complement(3196..>3696)
                     /locus_tag="VLD58_13640"
     CDS             complement(3196..>3696)
                     /locus_tag="VLD58_13640"
                     /inference="COORDINATES: protein motif:HMM:NF015563.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HSB55399.1"
                     /translation="GGLGLGGTAEGLVEGFRSMAFAALLIGFARGIYVVLEQGQIVDT
                     IVHGLFAPVAGLPVTLSALGMMGVHTLVHFPVPSTSGQAVLTLPLLVPLSDLIGLSRQ
                     VTVLAYQYGAGLCEILTPTNGALMAMLAAAGVTFEGWLRFALPLFVLLGLLAAVAIGT
                     GVAVGV"
BASE COUNT          592 a         1279 c         1300 g          525 t
ORIGIN      
        1 ccagccaggc caccatgggg ctgagatcga tcatcccgac cggtgggagg aaacggcgga
       61 tcggctcgat cagccagtcg gtcaggagca ccagcggccg catccagcgg gcatagggcg
      121 agatcccgaa ccaggacgcg atcacccgga cgaagatggc tgccatgagc aggctgaaga
      181 ccccgcccac cgcgacgtgg agccagatcc gagggccggc ccccgccagc gcggtcaggt
      241 tcaaggccat gccgatcaac caccggacca ggcttaccag caccagccct ccgacgatca
      301 ctccgccgag gagccagagc ggggcgtcct gggggttgcc accgaggcgg atcacccggc
      361 gttccagtgg gagcaggacg gggtcgctga tccggcgcac caggcggggc caggggccga
      421 aggggccgat gctgcgccgg cggaccgccc agtgggtgag cgcgacgacg gccgcgtagg
      481 ccagggcggc gaccacgacg atgcgggtga cggtgtcgag cgtggcggcg atcacgggcg
      541 tctcaggagc catcgtcgag gcccccgacc tgcatggggc gctgggctcc cgagcgggag
      601 gtgcacatga gggtgaagcg gccgccgttc agggtggctt cctcgaggat atggctgtct
      661 ccacggcagg cgacgatctc gcggctgtcg gtgcggcgga actgcaccgt gaccaccggc
      721 tcccgctcga cgctcaccag gacccgggcg gtggcggggg tcaggctgtc cacgcccatc
      781 tgccggaggg agccggccgg ccttccgcgg tgggaccccc ggtagtccac ggcgcggtcc
      841 accagctcga acacctcccg gccgagcgcg tcggcatcgg cctcggggcc ggtgcgcgcg
      901 cgtgcggcgg cggggcgagc ctccgggttg gcgccgccgc cgcaaccgct ggcggcccag
      961 agggccgcga gcagcacccc gacggcccgg tgcctcattc catcgcgaat tcgcggttga
     1021 acacgacctc gaaactgaag gtcttggagc ggctccgggt ttccatgtgc tcggcgatcc
     1081 gcttgagccg ggccgggatc tccatgatct tctcctgcgc cttccgcccc agctcgccca
     1141 ggccctgcag gctctcgatc ttccagtacc ggatctgctc ctgcacgatc cggagatagt
     1201 cgcgcggacc gtagatcccg gtccggcgga tcacgtcggc cagctccttg aaccccggca
     1261 tggtgacgcc gggcatgtcg atcgccggga ggatgaaggc cgccgaatgg agcgcctgat
     1321 cggggtcgcg ctggaggatc tcctcgaaga ccgagcggta gaacgcgtaa tgccgggcct
     1381 cgtccttggc gacgtggctg agcacctccc ccagccgggg ctcgtattcc gcgacgatgc
     1441 gcccggtctc gctgtgggag aactgggtgg cccgctcctg caccgtggtg tagacgaaga
     1501 cccggtaggg atccttgtcc cactccgggt ggaagccgcg gcggaggtac tcgaactgca
     1561 tctcctcgat cttgcgctga tcgaagagtc gggtatccct gcagtagtcg tgcagcaccg
     1621 cgccgtgccg gtcttcctcg gcggtccaaa gattgttcca cagccgccag tagctggagt
     1681 cgccgaggta gacggccagc agccggtgga agtggggcag cccctcttcg gtcagcatgt
     1741 tgagggcgag ggcggcccgg accgggtcgg ggatgccctc cgcctgggcc cgcaggcggc
     1801 cgtggaactc gtcggggcag gtgtcgggat cggggccaag gagctcggac ggataccaaa
     1861 gttcccgctt ccgctcgtgc gactccatga gctcgcggac ccggtcctcg aggtcccgga
     1921 ggacttccat cttggctgcg agctcccgct ccgaggcggt gggcgtgctc atgacgttcc
     1981 tcgtgacggg tgagtctgcc accaacacat cggaccagcc tctaaagata gcggggctgg
     2041 tccggggaac gccacgagcg tgatgctccg cggggagccg ggcctagagc gacttctcca
     2101 tgagggccca gcggcgccgg ccgacgtaat tatcgcgctc gaagatccgc cgccagccga
     2161 gcgcggccag aagtccctcc gagcggttgt cgtcggtcca gaactcggcc aggtgggcgc
     2221 cggaatcgac cgcgcgctgc tcgaaggcgg ccagaagccg gtgggcgtgg ccccgatgcc
     2281 tctcctgcgg caggacaacc acgtccacca gatgggccac cccgccccgg agccagtagc
     2341 gcaggccccc gatccagtcg ccgatctcgt tgctgagaat gaggtaacgc tggtccaggg
     2401 tgcctgacca gccggagggg tcctcctcct gctcgagcag ctcggagtac caggcggcga
     2461 aatcgccgtc ctgttccatt tcgcggatgg tgagctcgct catgctgcct gccttccagg
     2521 gggacgactc aacggatatg caactgtagt gccatctgcg actggcatct gtgaacacgg
     2581 tcacccggac ggcgcgccgg cggccacacg ctccctggca taaccatcgg cggggccggc
     2641 gaagttcctg aatccgacgt tgcctgcccg gcccgggccg ctaccttgag aagacaccgg
     2701 cacccggccg gcaccagaga ggatcgcatg gccgagaccg ccccaggaac cgatgccgcc
     2761 gcacgcccgg tcgtggtgcg atgcgtcttc tgccagaccc cgaaccgggt cgacctcgcg
     2821 cgactcgccg ccgggcccaa gtgtggcaac tgcaaccggc cgatccggct cgaccgcccg
     2881 atccccgtgg gggaggactc cttcgaccag accatcgccg gggcgtcggt gccggtggtg
     2941 gtggactgct acgccgattg gtgcggtccc tgccgggtga tggccccgac gctcgatgat
     3001 ttcgcccagc ggcacgccgg cgaggtcctg gtcgtcaagc tggacaccga tgccagtcct
     3061 accctgagta cgcggctcgg catccggggg attcctaccc tgatcgcctt cctccagggg
     3121 aaggagcggg ggcggcacgt cgggatcgcc gacctgcgca ccctggagaa gctggccggc
     3181 gtctaggccg ggcggtcaga ccccgaccgc taccccggtc ccgatcgcca cggcggcgag
     3241 caggccgagg agcacgaaga gcggcagcgc gaaccgcagc catccctcga aggtcacccc
     3301 ggcggccgca agcatcgcca tcagcgctcc gttggtcggc gtgaggatct cgcacagacc
     3361 ggcgccgtac tggtaggcca gcacggtcac ctggcgggac agcccgatca ggtcggacag
     3421 cgggacgagc agcggcaggg tgagcacggc ctggccgctg gtgctgggca ccgggaagtg
     3481 caccagggtg tggaccccca tcatccccag cgcggacagg gtcaccggga gcccggccac
     3541 cggagcgaac aggccgtgga cgatggtgtc cacgatctgg ccctgctcga gcaccacata
     3601 gatccctcgg gcgaatccga tcaggagcgc ggcgaacgcc atcgaccgga acccttcgac
     3661 gagtccctcg gcggtgcccc ccagaccgag gccccc
//
LOCUS       DATIFF010000930        10664 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1346214, whole genome shotgun sequence.
ACCESSION   DATIFF010000930 DATIFF010000000
VERSION     DATIFF010000930.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 10664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10664
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1346214"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..105)
                     /locus_tag="VLD58_13645"
     CDS             complement(<1..105)
                     /locus_tag="VLD58_13645"
                     /inference="COORDINATES: protein motif:HMM:NF013205.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HSB55400.1"
                     /translation="MFVDHVSIRVTAGTGGSGAASFARFKFKPKGGPDG"
     gene            complement(250..891)
                     /locus_tag="VLD58_13650"
     CDS             complement(250..891)
                     /locus_tag="VLD58_13650"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSB55401.1"
                     /translation="MAKQDNLDGTTLHLVRFAAAIAQGYEPELRERAAACKTGQVPPV
                     WVEEMILQSVLMVGYPRALVAFGLWRKASRLSAAAQDPEAEYTNVAEWTRRGEETCGV
                     VYGPNYRRLRENVRELHPALDLWMITEGYGRTMSRPGLDLLRRELCTVAQTAVLEVPR
                     QLHSHLRGALHAGATFGQVEAVLSVVNPLLSYDQWKRVKEMWTTVRDGWEPEE"
     gene            complement(940..1953)
                     /locus_tag="VLD58_13655"
     CDS             complement(940..1953)
                     /locus_tag="VLD58_13655"
                     /inference="COORDINATES: protein motif:HMM:NF017864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HSB55402.1"
                     /translation="MNADFRVEATRGNLVESVHRVSLAVVDASGALRASAGNPDLFTF
                     WRSAAKPFQVMPVLADGAADRAGFTVKEVALACASHSSEPAHVETALGMLRKLGLDEG
                     SLACGPHVPLSPAVAESVLRQGVTMTPAWCNCSGKHAAMLALAQAHGWPARGYEALGH
                     PVQERILTEICRWTDLRPDQLGLGVDGCTAVSVALPLRAMALAYARYGVSKEPAAVRL
                     KDAVASHPLMIAGEGRLCTDLLAATSGRVFAKVGADGVYSAMIPAAGLGLALKVEDGD
                     MRSSAPALVAILLWLGTVTDLGFDPSALPGTVLRHAALPTINTRGVETGMLRATGTPR
                     DFA"
     gene            1983..3488
                     /locus_tag="VLD58_13660"
     CDS             1983..3488
                     /locus_tag="VLD58_13660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55403.1"
                     /translation="MLRTCLRAGLVLLAAGPLAAQASPYISRDDPRLPAFEHLIALGD
                     VADPSPMIRPFRRIDAVRALDSALAGGEARDTALINELRSAWTEDTAEARWEVEARAG
                     GQAYTEGRRDPLHLAGRRRVRPYLELRLQANFDPLVLVSRPAIEPRVTDDPDWPGRKD
                     LKIAGRHSEAYLSAQFKYIRLLYGQMDQNWGPVTLPGIPLSDYGYPRPAFGFEVGNRR
                     FRLTSQASTLADVTDTAGVVTHRYFFAHRAALQVTRRFDLALWETVVLSGVDRSFDGR
                     YRNPVTLLLLANEYGLGDQGNVLLGFDAHWRVGRRTTLQAQLGLDDIQYQNRGSSTRY
                     PDRYAFTIQGTGPLSGRIAWRALYTQASSLAFRTFHATDAFTDQGVGLGRNFADNDQV
                     TLSLTAPIRRRWLVTPELTLLRQGEGRLDLPVPPSGTAEAGNTPEIFIGTVERTWRAA
                     LGVSGSEGPLALQANAGLHYIDNAGNVSGRSRTRFVGRIQATLGLVRGGHF"
     gene            3488..4477
                     /locus_tag="VLD58_13665"
     CDS             3488..4477
                     /locus_tag="VLD58_13665"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HSB55404.1"
                     /translation="MTGFSRGRLEALVTGMRGRQIVVVGDAMLDRYLLGDTERISPEA
                     PVPVVMVQERRTALGGAANVAANVAALGASCRLVGVTGDDRDGEALREAMQRSGLESR
                     WLLSVPKRPTTTKTRVVARGQQVVRIDEEDDAPLPQAMLDQLTGLALEAIADADALLL
                     EDYDKGVMAPSLIQAVMDAAKRRKIPTVVDPKFRSFFQYHGATLFKPNRRELGTALPG
                     IDLGSAHDLIAAADRLEVEHLLLTLGAGGMVLVTRGGKPAPLVVESIAREVYDVSGAG
                     DTVTAWAGAVLAAGGTAAEAAGIANLAASVEVAKAGVATVSPAEVIEAYQLLE"
     gene            complement(4484..7300)
                     /locus_tag="VLD58_13670"
     CDS             complement(4484..7300)
                     /locus_tag="VLD58_13670"
                     /inference="COORDINATES: protein motif:HMM:NF015140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007154 - cell communication [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Calx-beta domain-containing protein"
                     /protein_id="HSB55405.1"
                     /translation="MGTARLQGWLALLLVAGGLVAACGSPTDPPSNSNRDLLVRRWSF
                     TTMAVGATGEVPVGSERVQVGGTVTETMDFGPLILAPAGRGPIAKADVFGSEDGSTYW
                     AGVEAPNPGSLNPGDVIGNASSYLQFQYFKKTEPNAELRLVVTQANLEAIDGNPGPLL
                     PQECPWHQAGGSFADCRRVMWGWVDFHASAFSFFNQQEFFKAGGFADISGWRGAFDYD
                     AYTVGQSGVRFWDRSSFEFDPDVDGTGGGHAIARLAGPITLSIPLASVPVGQEFYVTA
                     QVKASALNHRQRESYLSSYLRDPAASHGLEWSYSGVEPVETPTTLPAPPPPLQAANCA
                     GGSTGAGSIQFDSTAFLQPELLGAGATVLVSRTGGTGGMVSARLSTANGSAADGSDYS
                     AVSTYVVFADGESGTRAVRIPIINDNTGEPTENLSVTLSEPAGCATLGSPSTATITIL
                     DDDNPVAPATYTLGGNVSGLTGSGLVVTNIGTNLSVGNGPFTFGLQYQAGNNYNVQVL
                     TQPTGPTQFCTVANGAGTFTDHDVTDVAVTCQTPAPVGSLDSTYGTNGRANIPGIGAA
                     IALALQSDGKAVVVGQTFAARFTTTGIPDSSFGGTGVVSVNFSGNVLDRVQGLALQAD
                     GKIVVVGFARVGTQNDFGLARLTTTGTLDGSFGTGGKVTTDFNGTTDQAFTALVQPDG
                     KLVVIGDAGTTGALGLDNDFAVVRYQANGAIDSTFGLNGKVMTNIGGRTDLAYAGALQ
                     PDGKIVIGGRVADGGGDNPDVGLVRYQPSGSPDSAFGTAGIVRTDLAATSWDEVSELV
                     LQPDGRILVSVQAQVGGTFDYMVARYTAAGTLDLGFGSGGVATVAFGTQNDFARSLAL
                     QADGSIVVVGNTQLTTLDFGVARLTSGGVLDQTFAAGGKLTVDFFNAADLAEAVAIQA
                     DGRIVVAGSAVNSGAGVGLARIVP"
     gene            7427..7500
                     /locus_tag="VLD58_13675"
     tRNA            7427..7500
                     /locus_tag="VLD58_13675"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7461..7463,aa:Val,seq:cac)
     gene            complement(7638..8261)
                     /locus_tag="VLD58_13680"
     CDS             complement(7638..8261)
                     /locus_tag="VLD58_13680"
                     /inference="COORDINATES: protein motif:HMM:NF025343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HSB55406.1"
                     /translation="MPGRKASEETRREQIIKAAYEVAARKGIDGLTVRLVAVKARLST
                     GLVLFHFKSKDQLVVALLDWLLSTTTVLHIGPEIQAIGAPLDRLLALLRQEMDRLSRE
                     PRRIRLFFEFWALGARHAQIGTRMRAELARYREAFRPMAQAVLEAEPERFPHVTADGL
                     AGVAVSFIKGCAVQSMIDPEHFDIHEYLIAAEGLLGQLAPPAKSGIE"
     gene            complement(8358..9134)
                     /gene="nuoB"
                     /locus_tag="VLD58_13685"
     CDS             complement(8358..9134)
                     /gene="nuoB"
                     /locus_tag="VLD58_13685"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF005012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HSB55407.1"
                     /translation="MLDFLRTRWAQGTRTSPFPDGDPGFPERFRGRPLLDPLRCDGGC
                     QECAARVPSDVLIVGSDGRALLDTGACLFSPEEASRCQHGAVSYSVDHRLAARSRQDL
                     VTPTGELPVIAALESKTRALFGRSLRLRSVAAGSCNGCEAELVALGNVVFDMARFGVQ
                     FVASPRHADGLVLTGAVSRNMRDAVYRVYEAIPEPKLVIAVGACAINGGPFRGSPEVD
                     DGVPADLPVDLWIPGCPPHPLTVLDGLLRLLGRLEGAIAS"
     gene            complement(9134..>10664)
                     /locus_tag="VLD58_13690"
     CDS             complement(9134..>10664)
                     /locus_tag="VLD58_13690"
                     /inference="COORDINATES: protein motif:HMM:NF012566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55408.1"
                     /translation="GTRGRGAMSTFDGLGLRNRRAISLAAVPREDVPRFRDTIIAAVR
                     GGWRLVALFGSPEPGGRTLIVAVLAQDERGQLGAVSAIVDGRYPALTPECPEAHLFER
                     ELAEQCGILPDGHPWLKPVRRHPADHRSGTVVGPIDREAYPFLQFRGDEVHEVAVGPV
                     HAGIIEPGHFRFQAHGEDVLFLEIMLGYQHRGVERLLETRRWPDAVLVAESIAGDTVI
                     GHASAACGAIEALARSRKTPRAQTVRGIALELERLANHIGDLGAIAGDIAYQPAASYF
                     GRMRGECLNLLMTLSGNRYGRGLIRPGGTLFDIPPAMAGEMRSRLEVLSAELEPVAHL
                     MLKNASVQARLEGVGVVPRQTCLDLGLVGVAARACEVPRDVRHDHPYGVFRFAHIPVA
                     TAWAGDVLARTLVRWLEVQRSLEFVVDQLGSLPRGAAQVECASLRPNELVVSLEEGWR
                     GEIAHIVMTDDRGDVRRHKVVDPSFHNWSALAAAMPGNQISDFPLCNKSFNLSYAGHD
                     L"
BASE COUNT         1734 a         3702 c         3603 g         1625 t
ORIGIN      
        1 gccgtcgggg ccgcccttgg gcttgaactt gaagcgggca aaggacgcgg ctccgctgcc
       61 gccggtgccg gcggtgacgc ggatggagac gtggtcaacg aacatcaggc ggccaaacgg
      121 taaggcggca aagcggcaag gcggcaaggc ggccgcattc cccactactt gccatgaagc
      181 ctcgcgccag gtgcgcccgg tctcgcacgg gagcactgac cgctttgccg ctttgccgcc
      241 ttgccgcctt cattcttccg gctcccatcc atccctcaca gtcgtccaca tttctttgac
      301 ccgcttccac tgatcatacg acagcagggg gttcaccacc gagagcaccg cctcgacctg
      361 cccgaacgtg gcgcccgcat ggagcgcgcc gcggaggtgc gagtgcagct gccgcggtac
      421 ctcgagcacc gccgtctggg ccacggtgca gagttcccgc cggagcaggt cgagccctgg
      481 ccgggacatg gtgcggccgt agccctcggt gatcatccag agatcgagcg cgggatgcag
      541 ctcgcgcaca ttctcccgga gccggcggta attggggccg tagaccacgc cgcaggtttc
      601 ctcaccgcgc cgagtccatt cggccacgtt ggtgtactcc gcctcgggat cctgggccgc
      661 ggccgagaga cggctggctt tgcgccagag gccgaacgcg accagggctc gcgggtagcc
      721 gaccatgagt accgactgga ggatcatctc ctccacccag actggcggca cctgcccggt
      781 cttgcacgcc gcggcccgct cccgaagttc cggctcgtag ccctgggcga tcgcggcagc
      841 gaagcgcacc aggtggagcg tggtaccgtc gaggttgtcc tgcttcgcca tgagtctaag
      901 tcccttccct gccgtggccc gaaccgggcc gacgcagccc taagcgaaat cgcgcggagt
      961 tcccgtcgcc cggagcatgc cggtttcgac cccgcgggta ttgatggtcg gcaacgccgc
     1021 gtgccgcagc acagttccgg ggagtgccga gggatcgaac cccaggtcgg tcaccgtccc
     1081 gagccacaac agtatcgcca ccagcgccgg agccgaactc cgcatgtccc cgtcctccac
     1141 cttcagtgcc aggccgagcc cggccgcggg gatcatggcg ctgtataccc cgtcggcgcc
     1201 gaccttggca aatacccgtc cgctggtcgc ggcgaggaga tcggtgcaga gccgcccttc
     1261 acctgcgatc atcaacggat gggacgcgac cgcgtccttg agacgcaccg ccgccggctc
     1321 cttcgacacc ccgtaccggg cgtaggccag cgccatggcc cgaagcggca acgcgaccga
     1381 cactgcggtg cagccatcga cgcccagtcc cagctggtcc ggccggaggt cggtccagcg
     1441 gcagatctcg gtgaggatcc gctcctgcac cgggtgcccc agagcctcat acccccgggc
     1501 gggccacccg tgcgcctgcg ccagcgccag catggcggcg tgcttgccgg agcagttgca
     1561 ccaggcgggc gtcatcgtca cgccctgacg gagcaccgac tcggccaccg ccggcgagag
     1621 cgggacatgg ggcccacagg ccagcgaccc ttcgtcgagg cccagcttcc gaagcattcc
     1681 cagggcggtc tcgacgtgcg ccggctcgct cgaatgcgag gcgcaggcca gggccacttc
     1741 ctttaccgtg aatccggcgc ggtctgcggc gccatcggca agcaccggca tcacctggaa
     1801 cggcttggcg gcggagcgcc agaaggtgaa gaggtcgggg ttgccagccg aggcgcggag
     1861 ggcgcccgag gcgtcgacga ccgccagcga gactcgatgg accgactcga ccaggttccc
     1921 ccgggtggct tcgacccgga aatccgcatt catggcgcgc aagataacgc tatcttggtc
     1981 cgatgcttcg cacctgcctc agagccggcc tggtcctcct ggccgcgggg ccgctcgcgg
     2041 cccaggcgtc cccctacatc tcccgcgatg atccgcggct ccccgccttc gagcatctga
     2101 tcgcgctcgg cgatgtggcg gatcccagcc cgatgatccg ccccttccgc cgcatcgacg
     2161 cggtccgggc gctggattcg gcgctggccg gcggggaggc ccgagacacc gctctcatca
     2221 atgagctccg ttcggcctgg accgaagaca ccgcagaggc gcgctgggag gtagaggcgc
     2281 gggcgggggg acaggcgtac accgaaggac ggcgcgaccc gctgcacctg gcggggagac
     2341 ggcgggtcag gccgtacctc gaactccggc ttcaggccaa cttcgacccg ctggtgctgg
     2401 tgagccgccc ggcaatcgag ccccgggtga cggacgatcc cgactggccc ggccgcaagg
     2461 acctcaagat cgccggccgg cacagcgagg cctatctctc ggcccagttc aaatacatcc
     2521 ggctgctcta cggtcagatg gaccagaact ggggaccggt gaccctgccg ggaattccgc
     2581 tcagtgacta cggctatccc cgccctgcct tcgggttcga ggtggggaac cggcggttcc
     2641 gactcacgag ccaggccagc actctcgctg atgtaactga taccgccggt gtcgtcaccc
     2701 accgctattt ctttgcccac cgcgccgcgc ttcaggtgac acgccggttc gacctggcgc
     2761 tctgggagac ggtggtactc tccggggtgg atcgttcgtt cgatggacgg taccgcaatc
     2821 cggtgaccct cctgctcctg gccaacgagt atggcctggg agaccagggc aatgtgctgc
     2881 tgggcttcga tgcccactgg cgggtcggcc ggcgcacaac cctccaggcc cagctcggcc
     2941 tcgacgatat ccagtaccag aatcgcggta gttccacccg gtatccggac cgctacgctt
     3001 tcactatcca gggcaccggg ccgctgtctg gccggatcgc gtggcgggcc ctgtataccc
     3061 aggcctcaag cctcgccttc cgaaccttcc acgccaccga cgcattcacc gaccaggggg
     3121 tcgggttggg acgcaacttt gccgacaatg atcaggtgac cctgagcctg acggccccca
     3181 tacggcggcg gtggctggtg accccggaac tcaccctgct gcgccagggg gaggggcggc
     3241 tcgacctgcc ggtcccgccg agcggtaccg ctgaagctgg gaatacgccc gagatcttca
     3301 tcggcacagt ggagcgcacc tggcgcgcgg cgctcggggt aagcggcagc gaaggaccgc
     3361 tggcgctcca ggccaacgcg gggctccact acatcgataa cgccggcaac gtcagcggcc
     3421 ggagccggac gagattcgtc ggacggatcc aggccaccct gggtctggtt cgcggaggac
     3481 acttctagtg acgggatttt cacggggccg gctcgaagca ttggtgaccg gaatgcgggg
     3541 ccggcagatt gtggtcgtgg gcgacgcgat gctcgaccgc tatctgctgg gcgacaccga
     3601 acggatctca cccgaggcgc cggtacctgt ggtcatggtg caggaacgcc gcacggcgct
     3661 gggcggagcg gccaacgtcg cggccaacgt cgccgcgctg ggcgccagct gccggctggt
     3721 gggcgtgacc ggcgatgacc gcgacggcga ggcgctgcgc gaagcgatgc agcgctccgg
     3781 gctcgagagc cgctggctcc tgagcgtgcc aaagcgaccg accaccacca agacccgggt
     3841 ggtggcacgg gggcaacagg tggtgcggat cgacgaggaa gacgacgcgc cgttgccgca
     3901 ggcgatgctc gaccagctca ccggcctcgc gctcgaggcg attgcggatg ccgacgcgct
     3961 gctgctcgag gactatgaca agggtgtgat ggcgccgtcc ctgatccagg cggtgatgga
     4021 cgctgccaag cgccgcaaga tccccactgt ggtcgacccc aagttccgct ccttcttcca
     4081 gtaccacgga gccaccctct tcaaacccaa ccgccgcgaa ctcggcaccg cccttcccgg
     4141 catcgacctt gggtcggccc acgacctgat tgcggcggcg gacaggctcg aggtggagca
     4201 cctgctcctc accctgggcg ccggcggcat ggtgctggtg acccggggag ggaagccggc
     4261 gccgctggtg gtcgagagca tcgcacggga ggtgtacgat gtctcgggcg cgggcgacac
     4321 ggtcacggcg tgggccggtg cggtgctcgc cgccgggggc accgcggccg aagcggcggg
     4381 catcgcgaac ctggccgcga gcgtggaggt ggcgaaggcc ggcgtcgcga ccgtctcgcc
     4441 ggccgaagtg atcgaggcgt accagctgct tgagtagtgc ggatcagggt acgatccgcg
     4501 ccagtcccac gcccgctccc gagttgacgg cactccctgc caccacaatc ctcccgtcgg
     4561 cctggatggc caccgcctcg gcgaggtcgg cggcgttgaa gaagtccacc gtcagcttgc
     4621 ccccggcggc aaaggtctga tcgagcactc caccgctggt cagccgcgcg acgccgaagt
     4681 cgagggtggt gagctgggtg ttccccacca ccacgatgct gccgtcggcc tggagggcca
     4741 ggctgcgggc gaagtcgttc tgggttccaa aggccacggt cgctaccccg cccgagccga
     4801 agcccagatc gagcgtgccg gcggcggtat agcgcgccac catgtagtcg aaggtgcctc
     4861 cgacctgcgc ctgcaccgac accaggatcc tgccatcggg ctggagcacc agctcggaga
     4921 cttcatccca gctggtggcc gcgaggtcag tgcgcacgat gccggccgtg ccaaaggcag
     4981 agtcgggcga gccgcttggc tggtagcgca ccaggcccac atcgggattg tcgccgccgc
     5041 catcggccac ccggccgccg atcacgatct tcccgtcggg ctggagcgcg ccggcgtagg
     5101 cgaggtcggt gcggccgccg atgttggtca tgaccttgcc gttcaagcca aaggtcgagt
     5161 cgatcgcgcc gttcgcctgg taccgcacca ccgcgaaatc gttgtcgaga cccagcgcgc
     5221 cagtggtgcc cgcgtcgccg atgaccacca gcttcccgtc gggctgcacc agggcggtga
     5281 aggcctggtc ggtggtgccg ttgaagtcgg tggtcacctt gccgccggtc ccgaagctgc
     5341 catcgagggt accggtggtg gtcagccgcg ccagcccgaa gtcgttctgg gtccccaccc
     5401 gcgcgaatcc caccaccacg atcttgccgt cggcttgaag ggcgagtccc tgcacccggt
     5461 cgagcacatt gccgctgaag ttcacgctca ccacaccggt ccccccgaag ctgctgtcgg
     5521 gaataccggt ggtggtgaag cgggcggcga aggtctgtcc aaccaccacc gccttgccgt
     5581 cggattgcag cgccagcgcg atggcggcgc cgatcccggg gatgtttgcc ctcccgttgg
     5641 tgccgtaggt tgaatccagg gagccgaccg gcgctggcgt ctggcaggtc accgcaacgt
     5701 cggtgacatc gtgatcggtg aaggtcccgg ccccgttggc gacggtacag aactgggtcg
     5761 ggccggtggg ctgagtcagg acctgaacgt tgtagttgtt cccggcctga tactgcaggc
     5821 cgaaggtgaa gggtccgttc cccacggaga gattggttcc gatgttggtg acgacaagac
     5881 cgctccccgt gagtccgctg acgttgccgc caagggtgta cgtcgccggg gcgaccggat
     5941 tgtcgtcgtc gagaatcgtg atggtggcgg tggagggtga gccgagggtg gcgcagccgg
     6001 cgggctcgga cagagtcacg ctgagattct cggtcggctc gccggtgttg tcgttgatga
     6061 tcgggatccg caccgcccgg gtgccactct caccgtcggc gaataccacg taggtggaca
     6121 cggcggagta atccgacccg tcggccgcgc ttccgttggc ggtgctgagt ctggcgctca
     6181 ccatgccgcc ggtcccgccg gtacgggaga ccagtactgt cgcgccggcg ccgaggagtt
     6241 cgggctggag gaaggcggtg gaatcgaact ggatcgaccc ggccccggtg gagccgccgg
     6301 cacaattcgc cgcctggagc ggaggtggag gcgccgggag ggtggttggt gtctccaccg
     6361 gttccacgcc gctgtagctc cattccagtc cgtggctggc ggccggatcg cgcaggtagg
     6421 acgacaggta ggactcccgc tggcggtggt tgagcgcgga ggccttcacc tgcgccgtca
     6481 cgtagaactc ctggcctacc gggacggagg ccaggggaat gctcagggtg atcggacccg
     6541 ccagccgcgc gatggcgtgc ccgcccccgg tgccgtccac gtcgggatcg aactcgaaac
     6601 tcgaacggtc ccagaaccgc accccgctct gaccgacggt gtaggcgtcg tagtcgaagg
     6661 ccccccgcca cccgctgatg tcggcgaagc cgcccgcctt gaagaactcc tgctgattga
     6721 agaacgagaa ggcggaggca tgaaagtcca cccaacccca catgacgcgg cggcaatcgg
     6781 cgaagctgcc cccggcctga tgccaggggc attcctgggg cagcagcggt ccagggttgc
     6841 cgtcaatcgc ctccaggttc gcctgggtca ccaccagccg cagctcggcg ttgggctcgg
     6901 tcttcttgaa gtactggaac tggaggtagc tggaggcatt tccaatcacg tcgccggggt
     6961 tgaggctccc cggattgggg gcctcgacgc cggcccagta ggtcgatccg tcttcgcttc
     7021 cgaagacatc ggccttggcg atcggtcccc ggccggctgg cgcgagaatg agagggccga
     7081 aatccatcgt ctcggtgacc gtgccaccga cctgcacccg ctcgctgccg accggcacct
     7141 cgccggtggc gccgacggcc atcgtggtga acgaccagcg ccgtaccagt agatcccgat
     7201 tggagttgga aggggggtcg gtgggggacc cgcaggcggc gacgaggccg ccagccacca
     7261 gcaggagagc gagccaaccc tggagtcttg cagtgcccat cgatccctcc cgcgagtgtc
     7321 catgaccgct ttccttcaca tggcgtcgaa ggggggcggg actggacacc ggggcctggg
     7381 agggttgcct taaccccctg ctacatgata ggttatccgc ccctcagggc gattagctca
     7441 gctggttaga gcgcgcgcct cacatgcgcg aggtcggggg ttcgagcccc tcatcgccca
     7501 tctcgaaact gccagcgcct cttcgatgat cacatcggag aggcgcggtg ctttcggggc
     7561 gtgggtgagg ggccgggagc gccgaggtgg gcggctcgcc cctcgcatgc cgtcgccgcc
     7621 ttcgcccagg gatgcagcta ttcgatcccg ctcttcgcgg gcggcgcgag ttgtcccagc
     7681 aacccctccg cggcgatcag gtactcgtgg atgtcgaagt gctcgggatc gatcatggat
     7741 tgcaccgcgc agcccttgat gaagctgacg gccacacccg ccagcccatc cgcggtgacg
     7801 tgagggaacc gttcgggctc ggcttccagc actgcctggg ccatgggccg gaaggcttcc
     7861 cgataccgcg ccagctccgc gcgcatcctg gttccgatct gcgcgtgacg cgcccccagg
     7921 gcccagaact cgaagaacag acggatccgt ctcggctccc gcgacaggcg gtccatctcc
     7981 tggcgcaaca gggccagcag gcggtccaac ggcgccccga tggcctggat ctcggggccg
     8041 atatgcagca cggtagtggt gctgagcagc caatccagaa gcgcgacgac cagctgatcc
     8101 ttcgacttga agtgaaagag caccaggccg gtgctcaggc gggccttcac cgccaccagc
     8161 cgcacggtca ggccgtcgat tcccttgcgg gcggccacct cataggccgc cttgatgatc
     8221 tgttcccgcc gagtctcttc cgaagcctta cgtccgggca tggcatcctc tgtccacggg
     8281 tttcaagggc gagtcccgat caaggctggc gccacaccca gccgttcaat tcacggtggc
     8341 attgaacgcg ttgccactca ggaggcgatc gccccctcca gccggccaag gagtcgcagc
     8401 agcccatcca gcaccgtcag gggatggggg ggacatcccg gaatccacag gtcgaccggc
     8461 aggtcggccg gaacgccatc gtccacttcc gggcttcccc ggaacggccc cccattgatc
     8521 gcgcaggcgc cgacggcgat caccagcttc ggttcgggaa tcgcttcgta cacccggtag
     8581 accgcatcgc gcatgttccg gctgacggcc cccgtgagga ccagcccgtc tgcgtgtcgg
     8641 ggcgaggcga cgaattgcac gccgaaccgc gccatgtcga acaccacatt gccgagcgct
     8701 accagctcgg cctcacagcc gttgcagctc cctgccgcga cggagcggag cctgagcgac
     8761 ctgccgaaca gggcccgggt cttcgactcg agcgcggcga tcaccggcaa ctcgccggtc
     8821 ggcgtcacga ggtcctgccg gctccgcgca gccagccggt gatccaccga gtacgagacg
     8881 gcaccatgct ggcaccgcga cgcctcttca ggtgaaaaaa ggcacgcccc ggtgtcgagc
     8941 aacgcccggc catccgaccc gacaatcagg acatccgacg gcacccgtgc ggcgcactcc
     9001 tggcacccgc cgtcgcagcg gagcggatcg agcagcggac gaccccggaa tcgttcggga
     9061 aacccgggat ccccatccgg aaagggcgag gtgcgagtgc cttgcgccca tcgagtacgg
     9121 agaaagtcca gcatcagagg tcatgccccg cgtaggagag gttgaagctc ttgttgcaca
     9181 gcgggaagtc cgagatctgg ttgccgggca tcgccgccgc caaagcgctc cagttatgga
     9241 acgacgggtc gaccaccttg tgacgccgga cgtccccccg gtcatcggtc atgacgatgt
     9301 gtgcgatctc gccccgccaa ccctcctcca gcgagacgac cagctcgttc ggccgcaggg
     9361 aggcgcactc cacctgcgcc gccccccgcg gcaggctgcc cagctgatcg accacgaact
     9421 cgagcgaccg ctggacctcg agccagcgca ccagggtgcg ggcgaggacg tctccggccc
     9481 aggccgtggc caccggaatg tgcgcgaagc ggaagacccc gtaaggatgg tcgtgccgga
     9541 catcgcgagg cacctcacac gcgcgggcag ccaccccgac cagtcccaga tcgaggcagg
     9601 tctgacgtgg caccacgcca acgccctcga gacgggcctg caccgaggcg ttcttgagca
     9661 tcaggtgcgc caccggctcc agctcggccg acagcacctc cagcctcgac cgcatctccc
     9721 cggccatggc cggcgggatg tcgaacaggg tgccgcccgg ccggatgagt cctctgccgt
     9781 agcggttgcc ggagagcgtc atcaggaggt tgagacactc cccgcgcatc cggccgaagt
     9841 aggacgccgc cggttggtag gcgatgtcgc cggcgatcgc gccgagatct ccgatgtggt
     9901 tggccaggcg ctcgagttcg agcgcgatcc cgcggacggt ctgggcccgg ggggtcttcc
     9961 tgctgcgggc cagggcctcg atggcgccgc acgccgcact cgcgtgaccg atcacggtat
    10021 cgccggcgat cgattccgcc accagcaccg cgtcgggcca cctgcgggtc tccagcagcc
    10081 gctccacgcc gcggtgctga tagcccagca tgatttccag aaagagcacg tcctcgccgt
    10141 gggcctgaaa gcggaagtgc cccggctcga tgatgcccgc atgcacaggg cccacggcca
    10201 cctcgtggac ctcgtcgccc cggaactgga gaaacggata cgcttcccga tcgatcggtc
    10261 ccacgaccgt gccgctccga tgatcggccg gatgacggcg gaccggcttg agccagggat
    10321 ggccgtcggg caggatccca cactgctcgg cgagctcgcg ctcgaagaga tgcgcctccg
    10381 ggcactccgg cgtgagggcg ggataccggc cgtccacaat ggccgagacc gcgccgagtt
    10441 ggccgcgctc gtcctgggcc agcacggcga caatcagggt ccgacccccg ggctccggcg
    10501 atccgaacag cgcgacgaga cgccaccctc ctcgcaccgc cgcaatgatg gtatcccgga
    10561 accggggcac atcctctctt ggcaccgcag cgagcgaaat cgcgcggcgg ttgcgcaggc
    10621 cgaggccgtc gaacgtgctc atggcgccac gaccccgagt ccct
//
LOCUS       DATIFF010000931         1522 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_577359, whole genome shotgun sequence.
ACCESSION   DATIFF010000931 DATIFF010000000
VERSION     DATIFF010000931.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_577359"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..393)
                     /locus_tag="VLD58_13695"
     CDS             complement(<1..393)
                     /locus_tag="VLD58_13695"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HSB55409.1"
                     /translation="MPRFAANLGYLFTERPLIERVDAAAAAGFKAVELQFPYDVPAAQ
                     MKAVIARNKLTILGVNTPPGEREGEFGLAAVPGREKDFAALFARALDYITAIGGSAIH
                     CLAGKVAVEQRPAAERVFIDNLTRAADLA"
     gene            complement(395..535)
                     /locus_tag="VLD58_13700"
     CDS             complement(395..535)
                     /locus_tag="VLD58_13700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55410.1"
                     /translation="MSSRIHPLTLALALGWSSPLVGQVPDWVNQILIAADLPVSTFTE
                     GP"
     gene            complement(673..>1522)
                     /locus_tag="VLD58_13705"
     CDS             complement(673..>1522)
                     /locus_tag="VLD58_13705"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB55411.1"
                     /translation="TLTTLTQALGTRYVIEREIAQGGMATVYLARDLQRASPAAIKVM
                     HPRLAEELGPERFLREFAVVGAMTHPLVVPLYDSGITGTLLYYVMPYVEGETLYERLR
                     RERRLPLEDALQITHDVAAALGYAHGRGVLHRDVKPENILLAARRALVADFGLARAIG
                     ATDSQKLTRTGLIVGTVFYMSPEQLLEARDLDQRADIYSLGCLLYEMLTGEPPFTGPT
                     LKELVARILRAPPPSARRLNPGVPEAVDQAISRALAKSAAERFATMGEFSAALPPPPI
                     RPEPGK"
BASE COUNT          246 a          482 c          546 g          248 t
ORIGIN      
        1 ggccagatcg gcggcacgcg tgagattgtc gatgaacacg cgctcggccg ccgggcgctg
       61 ctcgaccgca accttcccgg ccaggcaatg gatcgcactg ccgccgatcg ccgtgatgta
      121 atcaagcgca cgcgcgaaca gcgccgcaaa atccttctcg cggccgggca ccgccgcaag
      181 tccgaactcg ccctcgcgct cgcccggcgg cgtgttgacg ccaaggatcg taagcttgtt
      241 acgcgcgatt accgccttca tttgggcagc cggcacgtca tagggaaatt gcagttcgac
      301 cgccttgaag ccggcggcgg ccgccgcatc gacgcgctcg atcagcgggc gctcggtgaa
      361 caggtagccc agattggcgg cgaaacgcgg catgtcatgg cccttctgtg aaagtgctca
      421 ccggcaggtc cgcggcgatc aggatctggt tcacccagtc gggcacctga cctaccagcg
      481 ggctgctcca gccgagcgcc agggccaggg tcagcggatg gattcgggat gacatctgtc
      541 gttccttgga ggtgacctcc aagaagatac tatcgcgccg ccactctgag gtggggcagg
      601 cagggggtgg ggttgctggc cggggggccg agcctgccgg gagcaggccc gggggggctt
      661 acgaggcccg catcacttcc ccggttccgg ccggatcggc gggggtggga gcgcggcgga
      721 gaattcgccc atggtcgcaa agcgttcggc ggcggacttg gcaagcgctc ggctgatggc
      781 ctggtcgacc gcctcgggca cgcccgggtt gaggcggcgg gccgagggag gcggggcgcg
      841 caggatccgg gcgaccagct ccttgagcgt cggtccggtg aagggcggct caccggtcag
      901 catctcgtag aggaggcatc ccaggctgta gatgtcggcc cgctgatcga ggtcgcgcgc
      961 ctcgagcagc tgctccgggc tcatgtaaaa cacggtgccg acgatgaggc ctgtacgggt
     1021 gagcttctgg gagtccgtag cgccgatggc tcgggccagc ccgaagtcgg cgaccaacgc
     1081 gcgcctggcc gcgaggagga tgttctcggg cttgacgtca cggtgcagca ccccccgccc
     1141 gtgggcgtat cccagggccg cggcgacgtc gtgggtgatc tggagggcgt cctcgagcgg
     1201 cagtcgtctt tcacgccgca ggcgctcata cagcgtttcc ccttcgacat agggcatgac
     1261 gtaatagagg agggttcccg tgatacccga atcgtatagc gggacgacca gcggatgggt
     1321 catggcgcct acgaccgcga actcgcgaag aaaccgctcg gggcccagct cttccgccag
     1381 cctggggtgc atgaccttga tggctgccgg cgatgcccgt tggaggtcgc gcgcgagata
     1441 gacggtcgcc atcccaccct gggcgatctc gcgctcgatc acataccggg tgcccagggc
     1501 ctgggtcagt gttgtcaatg tc
//
LOCUS       DATIFF010000932         1297 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1039877, whole genome shotgun sequence.
ACCESSION   DATIFF010000932 DATIFF010000000
VERSION     DATIFF010000932.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1039877"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..935
                     /gene="hrcA"
                     /locus_tag="VLD58_13710"
     CDS             <1..935
                     /gene="hrcA"
                     /locus_tag="VLD58_13710"
                     /inference="COORDINATES: protein motif:HMM:TIGR00331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HSB55412.1"
                     /translation="QRFPLGVSSATIRNTMSELEEKGFLYHPHTSAGRIPTDRAYRWY
                     VDNLTRLSPPSSADQQVLQAELSPSRSVLEEILRRAAQVLGVLTQELGVAVAPALDSA
                     LLERLDLVKVSSDRLLLVFHLRSGAVRSIFVQVPGTMAADAVQRVAQTLNERLGGLSL
                     QEIRASLAERLRDADRSAHERELLNIFLEEGEEIFGLSSGAESVVLGSAQMLAGQPEF
                     ASSGRIRDLLDLTERRDLLRQALSARRSSGLTITIGGENPDSRFAGFTLVTSAYRSGD
                     LAGVIGVLGPTRMPYDKIIGLVDHTSRLVEGLME"
     gene            932..>1297
                     /locus_tag="VLD58_13715"
     CDS             932..>1297
                     /locus_tag="VLD58_13715"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HSB55413.1"
                     /translation="MSEFYELLGVARDASEAEIKKAYRKLAMEYHPDRNKASDAEAKF
                     KEITEAYEVLKDPERRASYDRYGKAGLGGAGAAGYGGFHHVDLAEALNIFMRDFGGFE
                     SMFGGGGQRAEARRGQDIRV"
BASE COUNT          206 a          425 c          462 g          204 t
ORIGIN      
        1 cccagcggtt cccgctcggc gtgtcctcgg ccaccatccg gaacacgatg agtgagctgg
       61 aggagaaggg gttcctctat cacccgcaca cttccgccgg tcgcatcccc acagaccggg
      121 cgtaccgctg gtatgtcgac aacctgaccc ggctctctcc gcccagctcg gccgaccagc
      181 aggtgctcca ggccgagctg tcgccctcgc gcagcgtgct ggaagagatt ctgcggcggg
      241 ccgcacaggt gcttggcgtg ctgacccagg agctgggtgt ggcggtggct cccgccctcg
      301 actccgcgct gctggagcgg ctggacctgg tgaaggtctc ttccgaccgc ctgctcctcg
      361 tgtttcatct caggagcggc gcggtgcgga gcatctttgt gcaggtcccc ggaaccatgg
      421 cggccgacgc ggtgcagcgg gttgcgcaga ccctcaacga gcgcctgggc gggctgtcgc
      481 tgcaggagat ccgcgcctcg ctggccgaac ggctgcggga tgcggatcgg tcggcccatg
      541 agcgggagct gctgaacatc ttcctcgagg agggcgagga gatcttcggc ttgtcgagcg
      601 gcgccgagtc ggtggtgctg ggcagcgcgc agatgctggc gggccagccg gagttcgcct
      661 ccagcgggcg gatccgggac ctgctcgacc tcaccgaacg gcgtgacctg ctgcggcagg
      721 ccctgtcagc ccggcggagc agcggcctga ctatcaccat cggcggagag aacccggaca
      781 gccggttcgc cggcttcacc ctcgtgacct cggcctaccg ctccggcgac ctggccggag
      841 tgatcggggt cctgggtccc acccgcatgc cctatgacaa gatcatcggc ctggtggatc
      901 acaccagccg cctggtggaa ggactgatgg agtgagcgag ttctacgaac tgctgggcgt
      961 ggcgcgggac gcgtccgagg ccgagatcaa gaaggcctat cggaagctcg cgatggaata
     1021 ccatcccgac cggaacaagg cttccgacgc ggaagccaag ttcaaggaga tcaccgaagc
     1081 gtacgaggtc ctcaaggacc ccgaacggcg cgcgagctac gatcgctacg gcaaggccgg
     1141 actgggtggc gccggggcgg ccggctacgg cggcttccat cacgtggacc tcgccgaggc
     1201 gctcaacatc ttcatgcgcg acttcggcgg cttcgagtcg atgttcggcg gcggtggcca
     1261 gcgggccgag gcgcggaggg gacaggacat ccgggtg
//
LOCUS       DATIFF010000933         1423 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_115783, whole genome shotgun sequence.
ACCESSION   DATIFF010000933 DATIFF010000000
VERSION     DATIFF010000933.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1423
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115783"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1103
                     /gene="bchZ"
                     /locus_tag="VLD58_13720"
     CDS             <1..1103
                     /gene="bchZ"
                     /locus_tag="VLD58_13720"
                     /EC_number="1.3.7.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR02014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030494 - bacteriochlorophyll biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="chlorophyllide a reductase subunit Z"
                     /protein_id="HSB55414.1"
                     /translation="PRTIDEDQWQAANRAMFWLWTEYGLKKGVRPDRRPRAPGAKPRV
                     NIIGPAYGTFNLPSDLAEIRRLIEGIGAEINLVFPLGSHLAEVPRLVDGDVNVVMYRE
                     FGRLLCEALEVPYLQAPIGLHSTTRFLRTLGELLGLDPEPFIEREKHTTIKPLWDLWR
                     SVTQDFFATASFGIVANETYARGVRHFLEEELGLPCTFAIARRPGAKTDNAGVRQAIR
                     EKPPLVLFGSYNERMYLSEVGGRGVYIPASFPGAIIRRHTGTPFMGYSGATHLVQEVC
                     NALFDALFHILPLGTDLDKVEPTPARATDSLPWDDAAKQRLDELVDQQPVLVRISAAK
                     RLRDKAERDARRRGDARVTLGHLQEAGIGVTH"
     gene            complement(1100..>1423)
                     /locus_tag="VLD58_13725"
     CDS             complement(1100..>1423)
                     /locus_tag="VLD58_13725"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSB55415.1"
                     /translation="GSTLEPDRCALYQRFFQSERHAHDVLTMMADWSLTELRADLPRV
                     PCPVHLVAGRRDHWVPLRLLRRLSRSIPHCTFTELGGGHLHHEESPAEAAALIERAAR
                     TAGLL"
BASE COUNT          233 a          468 c          516 g          206 t
ORIGIN      
        1 tcccccgcac gatcgacgag gaccaatggc aggcggccaa ccgcgcgatg ttctggctgt
       61 ggaccgagta cggcctcaag aagggagtcc gccccgaccg gaggccgcgc gctcccggcg
      121 ccaagccgcg ggtcaacatc atcggtccgg cctacgggac cttcaacctg ccctcggatt
      181 tggccgagat ccggcgcctg atcgaaggga tcggcgccga gatcaacctg gtcttccccc
      241 tgggtagcca cctcgcggag gtgccgcggc tggtggacgg cgatgtgaac gtggtgatgt
      301 accgggagtt cggccggctg ctgtgtgagg cgctggaggt accctacctg caggccccga
      361 tcggcctcca ttcgaccacc agattcctgc ggaccctggg ggagctgctg ggactcgacc
      421 ccgagccgtt catcgagcgc gagaagcaca ccaccatcaa gccgctctgg gacctctggc
      481 ggagcgtcac ccaggacttc tttgccacgg ccagcttcgg catcgtggcc aacgagacct
      541 acgcccgcgg cgtccgccac ttcctcgaag aggagctggg gttgccgtgc accttcgcga
      601 tcgcgcggag gccaggcgcc aagaccgaca atgccggggt ccggcaggcc atccgggaga
      661 agccaccgct ggtgctgttc gggagctaca acgagcggat gtacctgtcg gaggtcggag
      721 gccgcggagt gtacatcccg gcgtccttcc ccggcgcgat catccgccgg cataccggca
      781 cgccgttcat gggctattcc ggggcgaccc acctggtgca ggaggtgtgc aacgcgctgt
      841 tcgacgcgct gttccacatc ctgccgctgg ggaccgacct cgacaaggtg gagccgaccc
      901 ccgcccgcgc gaccgacagt ctcccctggg acgatgcggc caagcagcgg ttggacgagc
      961 tggtggatca gcagccggtg ctggtccgga tctcggcggc caagcggctt cgcgacaagg
     1021 ccgagcgcga tgcgcggcgc cggggtgatg cgcgggtcac gctgggccac ctgcaggagg
     1081 ccggaatcgg agtgacgcac tagaggagac cggccgtccg ggccgcccgt tcgatcaatg
     1141 cggcggcctc ggccggtgac tcctcgtgat gcaggtgccc gccgccaagc tccgtgaagg
     1201 tgcagtgggg aatggagcgg gagagccgcc ggagcagacg caggggtacc cagtgatcgc
     1261 gccggccggc cacgaggtgc acggggcagg gtacgcgggg caggtcggca cgaagctcgg
     1321 tgagcgacca gtcggccatc atggtgagca cgtcgtgggc atgccgctcg gactggaaga
     1381 atcgctggta gagggcgcac cggtcgggct cgagggtgga gcc
//
LOCUS       DATIFF010000934         1375 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_730998, whole genome shotgun sequence.
ACCESSION   DATIFF010000934 DATIFF010000000
VERSION     DATIFF010000934.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1375
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_730998"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..982)
                     /locus_tag="VLD58_13730"
     CDS             complement(<1..982)
                     /locus_tag="VLD58_13730"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB55416.1"
                     /translation="MRLMGRSPQSHHGLRILHMVVPGTAGGLETVVRLLARSQRDGGS
                     LPIVSTVVESDPGAHPFIAALRAEGTEVRAVRVNPRAYLAEWRALFRLCRHERPDVVH
                     THGARSDVIGGLAARVAQSRWISTAHGFTGGDTKNRLYERLQMAAYRRADAVAAVSEP
                     LRKKLAQRGVPERRLHLVRNAWSAGSSPLPRLEARGRLGLPPDRPVLGWVGRLSREKG
                     LDLLIDAVARLDDPRVMVAVVGDGAERPALQAQAAALGLGDRIRWHGPLPEAAPLFSA
                     FDLYVLSSRTEGTPMVLFEAMAAGVPIVAARVGGVPDILDAEAGWLVTPDD"
BASE COUNT          229 a          505 c          438 g          203 t
ORIGIN      
        1 cgtcgtccgg cgtcacgagc cagccggcct cggcgtcgag gatgtcgggc accccgccca
       61 cgcgggcagc cacgatcggc actccggcag ccatcgcctc gaacagcacc atcggtgtcc
      121 cctcggttcg cgaactcaaa acgtacaggt cgaacgccga aaacagcgga gccgcttccg
      181 gcagcgggcc atgccaccgg atccggtcgc cgaggccgag ggccgccgcc tgagcctgca
      241 gggccggcct ctccgctccg tcgcccacca cggccaccat gacccgggga tcgtccagcc
      301 gggccaccgc gtcgatcagc agatcgagtc ccttctcccg actcaatcga cctacccagc
      361 ccagtaccgg ccggtcgggc ggaagaccca gccggccccg ggcctcgagg cgcggcaagg
      421 gagacgagcc ggcgctccag gcgttgcgga ctagatggag ccgccgctcc ggcacgcctc
      481 gctgcgccag cttcttcctg agcggttcgg acaccgcggc cactgcatcc gcccgccggt
      541 aggcggccat ctgcagccgc tcatacaacc ggttcttggt gtcgccgccg gtgaaaccgt
      601 gggccgtgct gatccagcga ctttgcgcca cgcgcgcggc aagtccgccg atcacatccg
      661 agcgcgcacc atgcgtgtgg accacgtccg ggcgctcatg ccggcagagc cggaacagcg
      721 cccgccactc cgcgaggtac gcccgcggat tgacccgaac cgcccggacc tcggtccctt
      781 ccgcccgcag tgcggctatg aacggatgcg cgccgggatc ggattccacc accgtgctaa
      841 cgatcgggag acttccacca tcgcgctgtg atcgggcgag caatcgcacg acggtctcga
      901 gaccgcctgc ggtgccggga accaccatgt gaagtatgcg aagtccgtgg tgggattgtg
      961 gcgaccgacc catgaggcgc attttcgagc aatgtttgtg ccagcgacaa gtgcatgcgg
     1021 gagaacgatg ataccctcac acaatgaccc gtggtatcct tcccaccgca acggccccgc
     1081 ccagcgctcg atggcgtcgc tgatatggtg cggctggccc ggtgtgtaag gtatcggctc
     1141 cccgcccgaa tgcgcgcgac ctcggccgat tcgagcccgg cccgcgcccg cactatccgc
     1201 gtggcgagag tcctgtccgt tcatgaatcc gtctcccgga gaaatcccgg gagcgggtcg
     1261 gttgcgtctg cagcagttcc gggcggcgtg aacgccccga agggaaccgc ctaccgccta
     1321 tggaaggaac ccgctcaatg actgagtggc gcgcccgcga tctgttcggc catgc
//
LOCUS       DATIFF010000935         1218 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_883558, whole genome shotgun sequence.
ACCESSION   DATIFF010000935 DATIFF010000000
VERSION     DATIFF010000935.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_883558"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..592)
                     /locus_tag="VLD58_13735"
     CDS             complement(<1..592)
                     /locus_tag="VLD58_13735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HSB55417.1"
                     /translation="MFKKVLIANRGEIALRVIRACRELGLETVAVYSEADRESLHVRF
                     ADDDVCIGPAPSRQSYLRIPSLIAAAEITGADAIHPGYGFLAENAEFAETCRASNITF
                     IGPTGEQIRQMGDKATARRLAQEAGVPTVPGSPGTIEDPEEALAFAQEIGFPVIIKAT
                     AGGGGKGMRIATDADQFVQLFGLAQNEALAAFGNGSV"
     gene            complement(592..>1218)
                     /locus_tag="VLD58_13740"
     CDS             complement(592..>1218)
                     /locus_tag="VLD58_13740"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HSB55418.1"
                     /translation="NISQREVGSDTLSFGAALRHVLRQDPDVILIGEIRDAETLDTAL
                     KAADTGHLVFSTLHTTDATQTINRVISFYPPYQHQEIRMLLATALQAIVSLRLVPRAD
                     GRGRVPAAEVLVNTAAVADNMRDIEKALNIPDLIAEGTVSYGMQSFDQSLMKWFKEGM
                     ISYESALFYSSNPSEFALRVSGVDSASDRKFSEITGDAGAARSLDLTP"
BASE COUNT          174 a          422 c          429 g          193 t
ORIGIN      
        1 agaccgagcc gttgccgaac gccgccagcg cctcgttctg cgccaggccg aagagctgca
       61 cgaactggtc ggcgtcggtg gcgatccgca tccccttgcc gccaccgccc gcggtggcct
      121 tgatgatgac cgggaagccg atctcctggg cgaacgccag cgcctcctcg gggtcctcga
      181 tcgtgcccgg ggagcccggc accgtcggca cgccggcctc ctgggccagc cgccgcgccg
      241 tcgccttgtc gcccatctgc cggatctgct cgccggtggg cccgatgaag gtgatgttgg
      301 acgcgcggca ggtctcggcg aactccgcgt tctccgccag gaacccgtac cccggatgga
      361 tggcgtccgc cccggtgatc tcggccgcgg cgatgaggct ggggatccgg aggtacgact
      421 gccggctggg cgccggcccg atgcacacat cgtcgtcggc gaagcggacg tggagcgact
      481 cgcggtcggc ctcgctgtag accgccaccg tctccaggcc cagctcgcga cacgcgcgga
      541 tcacccgcag ggcgatctcc ccgcggttgg cgatcagcac cttcttgaac atcagggcgt
      601 caggtccagc gagcgcgcgg cgccggcgtc tcccgtgatc tcggagaact tccggtcgga
      661 ggccgagtcg acgccggaca cccgaagggc gaactcgctc ggattggagg agtagaacag
      721 cgcgctctcg taggagatca tcccctcctt gaaccacttc atcagggact ggtcgaacga
      781 ctgcatcccg tacgacaccg tgccctcggc gatgaggtcc gggatgttga gcgccttttc
      841 gatgtcccgc atgttgtcgg ccaccgcggc agtgttgacc agcacctccg ccgccggcac
      901 ccggccccgg ccgtcggccc ggggcaccag ccgcagcgac acgatggcct ggagcgcggt
      961 cgccagcagc atccggatct cctggtgctg gtacgggggg tagaaggaga tgacccggtt
     1021 gatggtctgg gtggcgtcgg tcgtgtgcag ggtggagaag accaggtgcc cggtgtcggc
     1081 ggccttgagc gcggtgtcga gggtctccgc gtcgcggatc tcgccgatca ggatcacgtc
     1141 ggggtcctgc cgcagcacgt gccgcagcgc ggccccgaac gagagggtgt cgctccccac
     1201 ctcgcgctgg gagatgtt
//
LOCUS       DATIFF010000936         2057 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1962393, whole genome shotgun sequence.
ACCESSION   DATIFF010000936 DATIFF010000000
VERSION     DATIFF010000936.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2057
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1962393"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..336
                     /locus_tag="VLD58_13745"
     CDS             <1..336
                     /locus_tag="VLD58_13745"
                     /inference="COORDINATES: protein motif:HMM:NF015658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF305 domain-containing protein"
                     /protein_id="HSB55419.1"
                     /translation="NWLTERGQAAPDPAAAPGHHAGGGQEMLMPGMLTGEQMARLAAA
                     KGAEFDRLFLQLMIQHHQGALTMVKTLFGTQGAAQETPTFRYASGVDTDQRFEIERME
                     KLLARETRP"
     gene            333..>2057
                     /locus_tag="VLD58_13750"
     CDS             333..>2057
                     /locus_tag="VLD58_13750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55420.1"
                     /translation="MTSAPWRLLIVAQALLLLPAGLRAQANAAAGQGPSTADPRASLK
                     AGFDDAGEAIEGFRLLAHRPPPPSFFDAATAGKNEFVNADIAFQGNYIFLGNYYGLQV
                     WDMSNPKEPVLRTSFVCPGGQNDPSVYRNLLFLSVEETSARVDCGREGVTDSVSADRF
                     RGVRIFDISDLDHPRQVAAIQTCRGSHTHTLVTDPKDPDNVYIYVSETSVVRSGSELA
                     GCSGKGPDEDPNTSLFKIDIIQVPLAAPQDARIVASPRLFADSSGNIAGLWKGGDHGE
                     GTQTTTVTNMCHDITVYQAVGLAAGACSGNGILLDVSDPVHPKRVAEVSDPNFSYWHS
                     ATFNNDATKVLFTDEWGGGAEPHCRASDPPKWGADAVFTLSHDTLSPAGYYKLPAVQS
                     DLENCVAHDGSLIPVPGRDILVQAWYQGGISVVDFTDAAHPAEIAYFDRGPLDPEKLG
                     EGGGYWSAYWYNGYIVGSEITRGLDLLELAPTAQLSQNEIDAARQVKLDAFNPQHQPR
                     FEWPASFVLARAYLDQLERGHGLAKNRVSSVAKTLKQAETQRGTKQGGTLTRLAADLE
                     RDAGRSSDP"
BASE COUNT          347 a          717 c          718 g          275 t
ORIGIN      
        1 aactggctca cggagcgggg ccaggccgct cccgacccgg ccgcggcccc cgggcatcat
       61 gccggcggcg ggcaggagat gctcatgccg gggatgctga ccggtgagca gatggcccgg
      121 ctcgccgcgg cgaagggcgc cgagttcgac cggctgttcc tgcagctcat gatccagcac
      181 caccaggggg ccctcacgat ggttaagacg ctgttcggca cgcagggcgc ggcccaggag
      241 acgcctacct tccgctacgc gtcgggggtg gacaccgacc agcgcttcga gatcgagcgc
      301 atggagaaac tgctggccag ggagaccaga ccatgacatc cgcaccgtgg cgcctgctca
      361 tcgtagcgca ggcgctgctg ctcctgcctg ccggcctccg cgcccaggcc aacgcggccg
      421 ccggccaggg gccgagcacc gcggacccgc gggcgagcct gaaggcggga ttcgacgatg
      481 ccggcgaggc gatcgagggc ttccggctgc tggctcaccg cccgccgccg ccgagcttct
      541 tcgacgccgc gaccgccggc aagaacgagt tcgtgaacgc cgatatcgca ttccagggga
      601 actacatctt cctcggcaac tactacgggc tccaggtctg ggacatgtcg aacccgaagg
      661 agccggtgct gcggacgtcg ttcgtgtgtc ccggcggcca gaacgacccc tcggtctacc
      721 ggaacctgct cttcctctcg gtcgaggaga ccagcgcgcg ggtggactgc gggcgagaag
      781 gcgtgacgga cagcgtgagc gcggaccgat tccggggcgt gcggatcttc gacatcagcg
      841 atctcgacca cccccggcag gtggccgcaa tccagacctg ccgcggctcg cacacgcaca
      901 ccctggtcac cgacccgaag gacccggaca acgtctacat ctacgtctcg gagacgagcg
      961 tagtgcgctc gggcagcgag ctggcgggat gctcggggaa gggcccggac gaggacccga
     1021 acacctccct gttcaagatc gacatcatcc aggtgccgct ggccgcgccg caggacgccc
     1081 ggatcgtggc ctcgccccgg ctcttcgccg actcgagcgg caacatcgcg ggcctctgga
     1141 aaggcgggga tcacggggag gggacccaga ccacgaccgt gaccaacatg tgccacgaca
     1201 tcacggtgta ccaggcggtg ggactggcgg cgggcgcctg ctccggcaac ggcatcctgc
     1261 tcgacgtcag cgacccggtc cacccgaagc gggtcgccga ggtgagcgac cccaacttct
     1321 cctactggca ctcggccacc ttcaacaacg atgccacgaa ggtcctcttc accgacgagt
     1381 ggggcggcgg ggcggagccc cactgccgcg ccagcgaccc gccgaagtgg ggcgcggacg
     1441 cggtgttcac cctgtcgcac gacacgctct cgcccgccgg ctactacaag ctgccggcgg
     1501 tccagtcgga cctggagaat tgcgtcgccc acgacggctc gctcattccc gtgccggggc
     1561 gggacatcct ggtgcaggcc tggtatcagg ggggcatctc ggtcgtcgac ttcaccgatg
     1621 ccgcgcaccc ggccgagatc gcctacttcg accgcggtcc gctggatccg gagaagctgg
     1681 gggagggcgg cggctactgg tccgcctact ggtacaacgg gtacatcgtg gggtccgaga
     1741 taacccgggg gctcgacctc ctggagctgg cgcccaccgc ccagctgtcg cagaacgaga
     1801 tcgacgcggc caggcaggtg aagctggacg ccttcaaccc ccagcatcag ccccgattcg
     1861 agtggccggc gagcttcgtg ctggcgcggg cctatctgga ccagctggag cgcggccacg
     1921 gcctcgcgaa gaaccgcgtg tcgagcgtgg cgaagacgct caagcaggcg gagacgcagc
     1981 ggggcacgaa gcagggaggc acgctgaccc ggctggcggc cgacctggag cgggacgcgg
     2041 gccggtcgag cgatccg
//
LOCUS       DATIFF010000937         1062 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_116317, whole genome shotgun sequence.
ACCESSION   DATIFF010000937 DATIFF010000000
VERSION     DATIFF010000937.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116317"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1062)
                     /locus_tag="VLD58_13755"
     CDS             complement(<1..>1062)
                     /locus_tag="VLD58_13755"
                     /inference="COORDINATES: protein motif:HMM:NF036827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HSB55421.1"
                     /translation="LSTPRAAALVAGLVLLVPFAIGVVGRVNLAFPADYLRWSPSQQL
                     VGIIPGWLASVAVRTVGTAGGVLVGVFALSALGILTIGWHPLAILRAGGGPAGEAGEE
                     DGRARRAPRPAKPVTAEAAEPVAAGVVAVAARDKPEKPERQRRPKPGPAPRAPAAPLP
                     EGVLIPPPELLTAPTSDELDPGTEEIEAMGQRLVQTLETFRVGGTIADRTVGPVVTRY
                     ELEPGPGVKVGRIAGLADDLALAMKARSLRIVAPIPGKARVGIEVPNPRARMVTIREL
                     VDNARFRTPGRILPVVLGRDLEGQEVYDDLAKMPHLLIAGATGSGKSVCINAIITSLI
                     YSHPPDRLQMLMVDPKMVEL"
BASE COUNT          162 a          397 c          354 g          149 t
ORIGIN      
        1 agctccacca tcttcggatc caccatcagc atctgcagcc ggtcgggggg atgcgagtag
       61 atcaggctgg tgatgatggc gttgatgcag acagatttcc ccgaccccgt cgcaccggcg
      121 atgagcagat gcggcatctt ggcgaggtcg tcgtacacct cctgcccctc gaggtcacga
      181 cccagcacca ccggcaggat gcgccctggc gtgcgaaacc gggcgttgtc caccagctcc
      241 cggatcgtga ccatccgggc ccgcggattg ggcacttcga tgcccacgcg cgctttgccg
      301 ggaatcggag ccacgatgcg caggctgcgc gccttcatcg ctagggcgag atcgtcggcc
      361 agccccgcga tccgtcccac cttcaccccc ggccccggct cgagctcgta gcgagtgacc
      421 actggcccca ccgtgcggtc ggcgatggta cccccgacgc ggaacgtctc gagggtctgc
      481 accaggcgct gacccatcgc ctcgatctct tcggttccgg gatccagctc atcggaggtg
      541 ggtgcggtca ggagctccgg cggggggatc aacacgccct cggggagtgg ggcggcggga
      601 gcacgcggcg caggtcccgg cttgggacgg cgctgtcgtt ccggtttctc cggtttgtcc
      661 cgtgcggcaa ccgccacgac gcccgccgcc acaggctcgg ccgcctcggc cgtcaccggc
      721 ttcgccggcc gcggcgcacg ccgggcgcgc ccatcttcct ctcccgcttc ccccgccggc
      781 ccgccaccgg cgcggagaat ggcgagcgga tgccatccga tcgtcaggat gccgagcgcg
      841 gagagcgcga acaccccgac caggacaccg cccgccgtac cgacggtgcg caccgccacg
      901 ctcgccagcc accccgggat aatcccgacg agctgctggg acgggctcca tcgcaggtaa
      961 tcggcgggga acgcgagatt cacgcgcccc acgactccga tggcgaacgg cacgagcaac
     1021 accaggccgg cgaccagggc cgcggctcgc ggcgtcgaga gc
//
LOCUS       DATIFF010000938         1168 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_423382, whole genome shotgun sequence.
ACCESSION   DATIFF010000938 DATIFF010000000
VERSION     DATIFF010000938.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1168
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_423382"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            207..>1168
                     /locus_tag="VLD58_13760"
     CDS             207..>1168
                     /locus_tag="VLD58_13760"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HSB55422.1"
                     /translation="MALLLIPAAGAALAARQYEPGPKLAPGVFLAEVPEGGPSAESQA
                     RSDVLQPRIVGGNATTIAEWPWQAAVTLNPDLFSGNGFDRQFCGGSLVAPTIVVTAAH
                     CVFNFSSGSFYPPSEQASITGRTTLSNSSQGQETAWSTYYVFVDSSGQPLFNPNTLEW
                     DVVFARLSSPSPASNSTPIQIAGANEAASWAPGNENAWATGWGSILFGGPKNDTLREV
                     NIDRIADSTCGAASSYGGDFHPETMVCAGEILGGQDTCQGDSGGPLVTPIGGGAFRLI
                     GDTSFGNGCALPNFPGVYGRVAEDPICSALQSGIQDVAGMNVVGA"
BASE COUNT          183 a          388 c          406 g          191 t
ORIGIN      
        1 catgttcgag cgcggctgag gcgcgagata gggaggcggc cgctgcgcca gccacctcta
       61 ggtggttttc ccggaggcaa gaaacggtgc tgggccgcga tgacccggcc tggtggagcg
      121 agacgattgg gttgggaatg aagagcttcg gtgatggagc agtgggggtt cggaggtgct
      181 tcctcctcgc gtcaggggcg gcgcttgtgg cgctactgct gatcccggcg gccggcgccg
      241 ctctcgcagc caggcagtac gagccgggac ccaagctcgc gccaggcgta ttcctggctg
      301 aggtgcccga gggtgggccg tcagccgagt cccaggcccg ctcggatgtt ctgcagccgc
      361 ggatcgtcgg cggcaacgcg accacgatcg cggagtggcc gtggcaggcg gcggtcaccc
      421 tcaatcccga cttgttctct ggaaatggct tcgaccggca gttctgcggg ggctcgctgg
      481 tggcgcccac gatcgtcgtc accgcggcgc actgcgtctt caacttcagc agcggctcct
      541 tctacccgcc cagcgaacag gcgtcgatca ccgggcgaac cacgctctcc aactcgagcc
      601 aggggcagga gaccgcttgg agtacctact acgtgttcgt cgacagctcg ggccagccgc
      661 tgttcaatcc gaacaccctc gagtgggacg tcgtcttcgc ccggctcagc tcgccttcgc
      721 ccgcctcgaa ctccaccccg atccagatcg ccggcgccaa cgaggccgcc tcctgggcgc
      781 ccggcaacga gaacgcctgg gccaccggct ggggcagcat cttgttcggc ggtcccaaga
      841 acgacaccct tcgcgaggtg aacatcgaca ggatcgccga ttcaacctgc ggcgcggcgt
      901 cctcctacgg cggcgatttc caccccgaga cgatggtctg cgccggggag atattgggag
      961 gccaggacac ctgccagggc gacagcggcg gccccctggt gaccccgatc ggcggcgggg
     1021 cgttcaggct gatcggtgat acgagcttcg gcaacggctg tgcgctgccc aacttccccg
     1081 gggtctatgg gcgggtggcg gaagacccga tctgcagcgc ccttcagagc ggcatccaag
     1141 atgtcgccgg catgaacgtg gtcggggc
//
LOCUS       DATIFF010000939         1784 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_884535, whole genome shotgun sequence.
ACCESSION   DATIFF010000939 DATIFF010000000
VERSION     DATIFF010000939.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_884535"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1048
                     /locus_tag="VLD58_13765"
     CDS             <1..1048
                     /locus_tag="VLD58_13765"
                     /inference="COORDINATES: protein motif:HMM:NF027964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="saccharopine dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HSB55423.1"
                     /translation="PDHLPSFLADKGDWGGRLRTVRLDVTDPIAVRETLGGHAAVMSA
                     IPYYYNGPMARAAVEAGCHFADLGGNTEIVLEQKKLHDEALRKGLSIVPDCGLAPGMV
                     NILAAEGIRRLDRADQVRVYVGGLPQHPEPPLNYQIVYSLEGALDYYTTPSWVLRGGK
                     PVQVDALSELEPVEFPAPVGTLEAFHTGGGISTLPFAYEGKVDVMEYKTLRYPGHAAI
                     MRPIRELGLLDLKPVDVKGKTVVPRDLFIAAVHPKLHRPLGQDLVALQVLVTGQKGGK
                     PARIHFRLIDRYDAEHGISAMMRTTGYSLSITGQMQADGRITMKGVHTPDEAMPFAPY
                     VAELAKRGIRIEEL"
     gene            1095..1628
                     /locus_tag="VLD58_13770"
     CDS             1095..1628
                     /locus_tag="VLD58_13770"
                     /inference="COORDINATES: protein motif:HMM:NF025946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HSB55424.1"
                     /translation="MLDFRNLWDNALTFEAFLASTTQHRGLWEGIYTIARLPGWAVDA
                     VPAGAERKLLVIAEDWCGDASSTIPILAKLTDTVPGLELRILLRDQHPEVMDRYLTNG
                     SRSIPIVIALDAQFRELGHWGPRPRALQAWVMENRGKVPKAELYPRVRQWYARDRGET
                     TIREVLETAGLAVAKVA"
BASE COUNT          292 a          611 c          615 g          266 t
ORIGIN      
        1 cccggaccac cttccgtcct tcctggcgga caagggcgac tggggcgggc ggctccgaac
       61 ggtgcggctc gacgtgaccg atcccatcgc cgtccgggag acgctcggcg gccacgccgc
      121 cgtgatgagc gcaatcccct actactacaa cgggcccatg gccagggccg cggtcgaggc
      181 cgggtgccat tttgccgacc tcggcggcaa caccgagatc gtgctggagc agaagaagct
      241 gcacgacgag gcgctgcgga aggggctctc catcgttccc gactgcggac tcgcccccgg
      301 catggtcaac attctggccg ccgaagggat ccggcggctc gaccgggccg accaggtgcg
      361 ggtgtacgtc ggcggccttc cccagcaccc cgagcctccg ctcaactacc agatcgtgta
      421 ctcgctcgag ggcgccctcg actactacac cacgccgagc tgggtgctgc gaggcggcaa
      481 gccggtgcag gtggacgcgc tcagcgagct cgagccggtc gagttcccgg ccccggtcgg
      541 gacgctcgag gctttccaca ccggcggcgg catcagcacg ctccccttcg cctacgaggg
      601 gaaggtggac gtcatggagt acaagaccct ccgctatccg gggcacgcgg cgatcatgcg
      661 gccgatccgg gagctgggcc tgctcgacct caagccggtg gacgtgaagg gaaagacggt
      721 cgttccgcgc gacctcttca tcgcggcggt gcaccccaag ctgcaccggc cgctgggcca
      781 ggacctcgtg gcactccagg tcctggtgac cgggcagaag ggcggaaagc cggcgcggat
      841 ccacttccgg ctgatcgacc ggtacgacgc ggagcacggc atcagcgcca tgatgcgcac
      901 caccggctac tcgctgtcga tcacggggca gatgcaggcc gacgggcgca tcaccatgaa
      961 gggcgtgcac acgcccgacg aggcgatgcc gttcgcaccg tacgtcgcgg agctggcgaa
     1021 gcggggcatc cggatcgagg aactgtagga gggggccggg tgttacctac ccgactcgca
     1081 tccgcggcgg agacatgctc gatttcagga atttgtggga caatgcgctg accttcgagg
     1141 ccttcctggc ctcgaccacg cagcaccgcg gactgtggga aggcatctac accatcgccc
     1201 ggctgcccgg gtgggccgtt gacgcggtgc cggcgggcgc cgagcggaag ctcctggtga
     1261 tcgcggagga ctggtgcggc gacgcctcga gcaccatccc cattctcgcc aaactgaccg
     1321 acacggtccc gggtctcgag cttcggattc tgctccgtga tcagcatccc gaggtcatgg
     1381 accggtacct gaccaacggc tctcgctcga ttccgatcgt catcgcgctc gacgcgcagt
     1441 ttcgcgagct ggggcactgg ggtccgcgcc cgcgcgcgct gcaggcgtgg gtgatggaga
     1501 accggggcaa ggtgccgaag gccgagctgt acccgcgggt gcgccagtgg tacgcgcgcg
     1561 accggggcga gacgaccatt cgcgaggtgc tcgagaccgc ggggctggcc gtcgccaagg
     1621 tggcgtgagc tagaacatcc agccgctgcc caccgagatg ttggccccct cggggccgcc
     1681 ggccagattg aacgtgaaga tcgtggaccg caggattcgc agcgccaccc cgccgcctcc
     1741 gctgaccttc atcccgtccg tggtcagctt gaacgattcc cgct
//
LOCUS       DATIFF010000940         3042 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_272041, whole genome shotgun sequence.
ACCESSION   DATIFF010000940 DATIFF010000000
VERSION     DATIFF010000940.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3042
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_272041"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            214..1473
                     /locus_tag="VLD58_13775"
     CDS             214..1473
                     /locus_tag="VLD58_13775"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HSB55425.1"
                     /translation="MNTSTTPIFVGIDISKAHLDTATRPGHLVGRHANDPAGIAALVA
                     RLKPLAPALVVVEATGGLELPLLAALQVAAIPVAAINPRQARDFAKATGRLAKTDRID
                     AEVLAHFAEAVRPAVRPLPSAKVQALDALLSRRRQLLEMQVMESNRLGTCSDPTVRAG
                     LERHLAWLKAEVADIPVAAINPRQARDFAKALGRWAKTDRIDAEVLAHFAEAVRPATR
                     PLPPAEVRALDALLSRRQQLLEMQVMESNRLGTCSDPTVRAGLERHLAWLKTEVTDAD
                     RLLAEAVQASPAWRGKDELLRSIPGLGPVTSLTLLAALPELGHLGGGALSALVGLAPF
                     ADDSGTRRGGRHVRGGRAAVRRVLYLAALSAVRHNPPLKAFRDRLAARGKRAKVILTA
                     VARKLLVIANAVIRTGRRWEPELAMAR"
     gene            complement(1537..2456)
                     /locus_tag="VLD58_13780"
                     /pseudo
     CDS             complement(1537..2456)
                     /locus_tag="VLD58_13780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611833.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
     gene            2679..>3042
                     /locus_tag="VLD58_13785"
     CDS             2679..>3042
                     /locus_tag="VLD58_13785"
                     /inference="COORDINATES: protein motif:HMM:NF024673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HSB55426.1"
                     /translation="MICRATGWPRSSVYHDAAPAADEGRLRRALGRLAAQWPTYGYRR
                     LTVMLRREGWSVNGKRVRRLMAEMGLKREAPVRRRRTTDSHHDFPRYPNLVERLEVTR
                     PDQVWVADITYIRLREEFV"
BASE COUNT          480 a         1089 c         1013 g          460 t
ORIGIN      
        1 gccccttgta tgtttcctgt gccgcttgtc gagcggccat aacatgggga tggagctggc
       61 aagccgttgc ccctttggct cgccctgcga ggccgtaaaa aagcgcgggc cgccgcctcc
      121 ctcctctccc gaccccatcc cgaacagtca cctggccacc aggccgaata acaaggacgg
      181 gacacgccgg gatcgctcct aaatttgaca tccatgaata ccagcactac accgatcttc
      241 gtcggcatcg atatctccaa ggcccatctc gatacggcca ccaggcccgg acatctggtg
      301 ggccgccacg ccaatgaccc ggccggcatc gccgccctgg tcgcccgact caaaccgctg
      361 gccccggccc tggtcgtcgt cgaggccacc ggcgggctag aattgcccct gctcgccgcg
      421 ctgcaggtgg ctgctatccc ggtcgccgcg atcaaccccc gccaggcccg cgacttcgcc
      481 aaggccaccg ggcggctggc caagaccgac cgcatcgacg ccgaggtcct ggcccacttc
      541 gccgaggccg tccggcccgc cgtccggccc ttgccctcag ccaaggtgca ggccctggat
      601 gccctgctgt cccgacgccg gcagctgctg gagatgcagg tcatggaatc caaccgcctg
      661 ggcacgtgct ccgacccgac agtgcgggcc gggctggagc ggcacctcgc ctggctgaag
      721 gccgaggtcg ccgacatccc ggtcgccgcg atcaatcccc gccaggcccg cgacttcgcc
      781 aaggccctcg gacggtgggc gaagaccgat cgcatcgatg cggaggtcct ggcccacttc
      841 gccgaggccg tccgacccgc cacacggccc ttgcccccgg ccgaagtgcg ggccctggac
      901 gccctgctgt ctcgccgcca gcaactgctg gagatgcagg tcatggaatc caaccgcctg
      961 ggcacctgct ccgacccgac ggtgcgggcc ggcctggagc ggcacctggc ctggctgaaa
     1021 accgaggtca ccgacgccga ccggctcctg gccgaggcgg tccaggccag cccagcctgg
     1081 cgcggaaagg atgagctgtt gcggagcatt cccggcctgg gaccggtcac gagcctgacg
     1141 ctcttggccg cgttgccgga gctggggcac ctcggcgggg gcgcgctgtc ggccctcgtg
     1201 ggcctggccc cgttcgccga cgacagcggc acgcgtcgcg gcggccggca tgtccggggt
     1261 ggtcgggcgg cggtgcgccg cgtactgtac ctggcggcgt tgtcagcggt tcgtcacaac
     1321 ccgcccctga aggcgttccg ggatcggctg gcggcgcggg ggaagagggc gaaagtgatc
     1381 ctgacggcgg tcgctcgcaa gctgctggtg atcgccaacg cggtcatccg caccggccgg
     1441 cggtgggagc cggagttggc gatggcgcgc taacgatcac cgctcgatcc cgcgctcaaa
     1501 ccgggccctc gggccttgac tcggaacaca gtcgcttttt ccctcgaccc ggtcgaggct
     1561 cgctaccact cgctccacac gccccttcag gaccagtccc gaagcggcca gtggtggccg
     1621 cccatcgtcg tcaaggcgct gcgcaccgcg gcacagtagc cccgcaccgc cttggcctcc
     1681 gggtcgtcgc ggccctcgac cttgcgctcg atcggccgca cgccccggac ccgcttcttc
     1741 aattgcttct tggcgtggcg gtcggcctcg aagatcggtt tggccgcctc acgcaggtag
     1801 tgaaagtgac aaagctgatg gggcacaccg ggcagagcct tcttcacggc cttgcggatc
     1861 gagtcctgcc catcggagac cacgcctgta atcggcacct tcaacgcgtt ctggacctga
     1921 ccgatcagca cggccaggtc atcctgggtc gaggagagca ggcccttggc caagaggatc
     1981 tcgccgctca ggcagtcgcg taggacccag aggacctcgt ggccgacgtc gggttgcagg
     2041 ccgtcgatcg ccaggatgac gcggccttcg gcggcgggga tccgttgcag ccgccggtcc
     2101 tcagccagcg acagggccaa caactcgtca tagcgatcca ggagattagt cacgctccgc
     2161 gggcagaggg ccacgccccg gcgaatcaac tcggcatgga tctcaggaac gctgcggtgc
     2221 tgatcgtagc ggagttgccc gatcgtagcg atgacgtcga ggccgaactc gtgctggggc
     2281 agcgcgagtc gcccctcggt ctcggggcgg accgaccggc cgcagcgtgc gcagtcccgg
     2341 tcacgacagc gccgcacctg aactaccaac cgaaccgggc cgtccagggt gacgacggta
     2401 cggcgattgg tgtaagcggc ccagagaggt cggccgcact cggggcattc ggtgatcagg
     2461 gtggtaagag ccacttgctg agacggtaca gggcgggcgg tccgtcgggc catcggtgca
     2521 actccacggg cgaacggact cccgcgtcgt aaccgatgcc gacataacga tcaagggaat
     2581 tttgccgccc taggaaaaat agcctcggcc ttgctcccct cggccctgag gcgcgacggg
     2641 aggtcatcct gacgctggcg gccgagtacc cggtccgctt gatctgccgg gcgacgggct
     2701 ggccccgcag cagcgtctac cacgacgccg ccccggccgc cgacgagggg cgacttcggc
     2761 gtgcgctcgg gcggctggcc gcccagtggc cgacctacgg ctatcgacgg ctgacggtca
     2821 tgctccgacg cgaaggctgg tcggtcaacg ggaagcgagt ccggcgcttg atggccgaga
     2881 tgggcctgaa gcgcgaggcc cctgtacgcc ggcggcggac gaccgacagc caccacgact
     2941 tcccccgcta ccccaacctg gtcgagcgcc tggaggtcac ccgccccgat caggtgtggg
     3001 tcgctgatat cacatacatc cggctccggg aggagttcgt ct
//
LOCUS       DATIFF010000941         5514 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1502220, whole genome shotgun sequence.
ACCESSION   DATIFF010000941 DATIFF010000000
VERSION     DATIFF010000941.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5514
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1502220"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1236)
                     /locus_tag="VLD58_13790"
     CDS             complement(<1..1236)
                     /locus_tag="VLD58_13790"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HSB55427.1"
                     /translation="MWLLSALPRISGWIVHSMHRVTAIEGAVPRAGPALLVANHPSGL
                     IDPLVVSVAAERPVRWLAKSTLVFHPLLGWLFRAAGCIPVYRRQDDPTQMDRNLDAFR
                     AAVDVLAAGNAVAMFPEGISHHSPGLAPMKTGAARLALSASAAIGGPIPIIPIGVIYR
                     DAPTFRSEAGVVVGQPIEWWDLASREAEDRAAAQELTERIGAGLANVTRDLDTWADQA
                     IVEHAAAVLAAQSPGGTAPPSWIARGSAMLTRMDEAHDPALPALRQRLRAHSRALKRL
                     ELSPAELAANAQPRIPRYWRGWRVPLAAFTWSIGRLWTWPPYRATGALATRLAPDQDT
                     LGTFKAAIGIVLFTVWIGLTSVLVGRTAGTLWGWLALPACTALAFLTLRLEEARQRAR
                     TAQRISTWRARKSEVLEQLR"
     gene            complement(1362..2894)
                     /locus_tag="VLD58_13795"
     CDS             complement(1362..2894)
                     /locus_tag="VLD58_13795"
                     /inference="COORDINATES: protein motif:HMM:TIGR00225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HSB55428.1"
                     /translation="MPSRSSRLLFALAPVAAVAFVAGRASVGDGERLFRAVFSVVARD
                     AVDSIPEDRLYELAARGLVASLDDPYAGLQPRDEFAKFSRNQLGNSYGGLGLRITKAR
                     GGLAVFRVIPGGPAEQAGVARGDRILAVNDSSAAEWDVPRASQSLTGTPGTPVTVTFE
                     RARDRQRYSRQFTRAVIHPPAVPFVAMLPGSVGYLPLQRFSDQSAGDVAAALAQLRAA
                     GAQRLVMDLRGNPGGDLQQAAQLAGLFVGVGKPVVRVQYRRFADTLEAANGPLLAPSL
                     PMAVLVDSNSASASEIVAGALQDYDRALVVGTTSFGKGLVQGVYRLEDGWVLRLTSGH
                     WYTPSGRLIQKTAADSIPRSDRPVFHSIGGRTVLGGGGITPDIEVANPITPPAEQALA
                     RQLSVKGREASAVLDRYGEELERQVAPGFTVRAEWRGEAVRRLRQAGVTMDDSLVTQG
                     SGLLDRLLESRIGLFTDTDSTAFLRSFTADPQLGQALDLLRQARDQSGLYAVAARVHR
                     EG"
     gene            3112..4155
                     /locus_tag="VLD58_13800"
     CDS             3112..4155
                     /locus_tag="VLD58_13800"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HSB55429.1"
                     /translation="MALLDTAHQRASFLILLLGIGLLIALAPFMSGLVGGLVLYVIFA
                     PAHRWLNRRIPARLSAGLVVVLALVILVVPTISFAGLVANQAQNIATGVIRGPLLDRL
                     SELRFGEFELGPRLAGLGEKIVSWIGAGAFGLLGTATRIGLNLTLALFITFYLLLSGG
                     GAAWSVVKPYIPFSAASADILRDRFRDVTVSTVIGTGLIACTQGGLVAIGFWVTGISN
                     ALFWGLVTVVFAILPVVGAGLVWGPGAITLLLDHRYGAAAVLIVLGIVVVGNVDVLIR
                     PMIFRRYAQIHPLVTLVGAIGGVGYFGLLGILIGPLAVSYFFELIRMYQAEYLPGGEP
                     IPAQATTSTESSP"
     gene            4152..5243
                     /locus_tag="VLD58_13805"
     CDS             4152..5243
                     /locus_tag="VLD58_13805"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase"
                     /protein_id="HSB55430.1"
                     /translation="MTTEAPRKDPRMLVKDPDGLNTGPPPGLLTDPITPTAILFTRSH
                     APVPHVDAASYRLRVSGLVRNPLELSLADLAGFARREETATLICAGLRRSELEAVRPV
                     PGELLWGAEPVGTGVWSGVPLREVLAQAQVMGPASHVEFIGLDQVERGGKVFGFGGSV
                     PLEKATGTEVLLADRLNNLPLPAEHGFPLRALVPGYYGARSVKWLGEIVVREGGSANY
                     FQTQAYRVLATPRSDDPRAVRDGTELGELVLNSVISAPESGARVPPGRCVMSGWAIGP
                     GGQALARVEVSPDGGSSWSEAQVLPADGDFAWRHWRATVNLTSGRHTLVVRAFDKKGR
                     GQPAELAEVWNVKGYANNAWHRVAVTAAD"
     gene            5292..>5514
                     /locus_tag="VLD58_13810"
     CDS             5292..>5514
                     /locus_tag="VLD58_13810"
                     /inference="COORDINATES: protein motif:HMM:NF012506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HSB55431.1"
                     /translation="MSAGTPEPTRGLDNVIALSSTVCRLSAEDGRLAYRGYDVRTLGE
                     QSTWEETACLLVLGTLPTSAELRLFSNQVK"
BASE COUNT          828 a         1893 c         1910 g          883 t
ORIGIN      
        1 ccgtaactgt tccagcacct cggattttct cgctcgccag gtcgatatcc tctgggcagt
       61 ccgcgcccgc tgccgcgcct cttccagccg gagcgtgagg aacgccagtg ccgtgcaggc
      121 cgggagcgcg agccagcccc acagcgttcc cgccgtccgt ccgaccaaca ccgaggtcag
      181 cccgatccag acggtgaaaa gcacgatgcc gatcgccgcc ttgaaggtgc ccagggtatc
      241 ctgatccggg gcgagcctcg tggcgagcgc gccggtggcg cgatagggcg gccaggtcca
      301 caggcggccg atactccagg tgaatgcggc gagcggaacc cgccagccgc gccagtatcg
      361 gggaatgcgc ggctgggcgt tggcggcgag ctctgccggc gagagttcca gccgtttgag
      421 ggcgcgggag tgggcccgga gccgctgccg cagcgccgga agggcgggat cgtgcgcctc
      481 gtccatacgg gtaagcattg cgctcccccg cgcaatccag gacggcggcg ccgtccctcc
      541 cggcgactgg gcggcgagca ccgccgccgc gtgctccacg atggcctgat cggcccaggt
      601 atcgaggtcg cgcgtgacat tcgcgagccc ggcgccaatc cgctccgtga gttcctgcgc
      661 cgcggcccga tcctccgcct cgcggctggc aaggtcccac cactcgatgg gttggcccac
      721 cacgacgccg gcctcggagc ggaaggtcgg ggcgtcgcgg tagatcaccc cgatgggaat
      781 aatggggatc ggcccgccga tcgccgcgct ggccgacagc gcgagcctcg ccgcaccggt
      841 cttcatcggg gcgagcccgg ggctgtggtg actgatccct tcggggaaca tggcaactgc
      901 gttccccgcc gcgagcacgt cgactgcagc gcggaaggca tcgaggttgc ggtccatctg
      961 tgtgggatca tcctggcgac ggtagaccgg aatgcatccc gccgcgcgga agagccagcc
     1021 cagcagcgga tgaaagacga gggtggattt ggcgagccag cgaaccgggc gctccgcggc
     1081 aacggaaacg accaggggat ctatcaaccc gctcggatga tttgccacca ggagggccgg
     1141 gccggcgcgc ggcaccgccc cttcgatggc ggtgacccgg tgcatgctgt gtacgatcca
     1201 gccgctgatg cggggcaggg cggagaggag ccacatgcct cgtaactaag gcggcaaggc
     1261 ggcaaagcgg caaggcggcc aggaagacac gaagggtgag tctcccgagg gactcaccct
     1321 tcgcattcag cttgcgcttt gccgccttgc cgcctgcccg tctatccctc ccggtgcacc
     1381 ctcgccgcga ccgcgtacag ccccgactgg tcccgcgcct gccgcagcag atccagcgcc
     1441 tggcccagtt gcgggtcggc agtgaaggaa cggaggaacg cggtcgagtc ggtgtcagtg
     1501 aagagcccga tgcgggactc gagcagccgg tcgaggaggc ccgacccctg ggtcaccagg
     1561 gaatcgtcca tggtgacacc tgcctggcgg aggcgccgca ccgcttcgcc gcgccactcg
     1621 gcccgaaccg tgaaaccggg agcgacctga cgctccagct cctcgccata gcgatcgagc
     1681 actgccgacg cctcgcggcc cttcacggag agctgacggg ccagggcctg ctcggcgggc
     1741 ggggtgatgg gattcgccac ctcgatgtcg ggcgtgatgc cgccgccgcc cagcaccgtg
     1801 cggccgccga tcgagtggaa gacgggacgg tcactccgcg ggatcgagtc ggccgcggtc
     1861 ttctggatca gccggccgct cggggtgtac cagtgtccgc tggtgagccg caggacccag
     1921 ccgtcctcca gccggtagac gccctggacc aagcccttgc cgaacgaggt ggtgcccacc
     1981 accagcgcgc gatcgtagtc ctggagtgcg cctgccacga tttcggacgc cgaggcggaa
     2041 ttgctgtcga ccagcaccgc catcggaagc gagggagcga gcagcgggcc gttggccgcc
     2101 tcgagcgtgt cggcgaaccg gcgatactgt acccggacca ccggcttgcc gaccccgacg
     2161 aacaatcccg ccagctgcgc cgcctgctgc agatccccgc cggggtttcc gcgcaggtcc
     2221 atcaccaggc gctgcgcccc ggccgcgcgg agctgcgcca gcgcggccgc gacatcgccg
     2281 gccgattgat cactgaaccg ctgcagcggg agatagccta ccgatccggg gagcatcgcc
     2341 acgaacggga ctgccggcgg gtgaatgacg gcgcgggtga actggcggga gtagcgctgc
     2401 cggtcgcggg ctcgctcgaa ggtgacggta accggcgtgc ccggggtgcc ggtgagcgac
     2461 tgcgaggctc gcggcacatc ccattcggcg gcactgctgt cgttcaccgc caggatccgg
     2521 tcgccccggg ccaccccggc ctgctcggcg gggccaccgg gaatcacgcg aaagaccgcg
     2581 agccccccgc gggccttggt gatccgaagc ccgaggccgc catagctgtt gcccagctgg
     2641 ttccggctga acttggcgaa ctcgtcccga ggctggagtc cggcgtaggg atcgtcgagg
     2701 ctcgccacca ggccgcgggc tgcgagctcg tagagccggt cttccgggat gctgtcgacc
     2761 gcatcacgcg cgaccacgct gaacaccgcc cggaacaacc gttccccatc cccaacgctg
     2821 gcgcggccgg cgacgaaggc cacggcggcg acgggggcaa gcgcaaagag aagtcggctg
     2881 gacctgctcg gcatcgggcc tccggcttgg aatcggaatg gaacagactg tgggaccact
     2941 ccttacgtgc ccgactcggg aaagatgcaa tccgggcccc aggcgtcggt tcggtgctgg
     3001 cccgcaccat cgacccatcc aggcccgggg ggaagtgcaa tatcttcttg ccccgtctaa
     3061 gcttgtccat cctgatggcg tcgtattctc agccctttcg cgcccagagt catggccctt
     3121 ctcgataccg cgcatcagcg cgcctccttc ctgatcctcc tgctggggat cggactgctc
     3181 atcgccctcg ccccgttcat gagcggcctc gtgggtggac tggtgctcta cgtcatcttt
     3241 gcgccagccc accgctggct caaccgccgg atacctgccc gcctctcggc cggactggtg
     3301 gtggtgctcg cgctggtgat cctggtggtg ccgaccattt cattcgctgg attggtggcg
     3361 aatcaggccc agaacattgc caccggggtg attcgggggc cgctcctcga ccgcctctcg
     3421 gaactcaggt tcggcgagtt cgagctgggc ccgcgccttg ccggtctcgg cgagaagatc
     3481 gtgagctgga tcggcgccgg cgcgttcggg ttgctgggca cggccacgcg gatcggcctc
     3541 aacctcacgc tggcgctgtt catcaccttc tacctgctgc tctctggcgg tggggcggcc
     3601 tggtcggtgg tgaagccgta catcccgttc tcggccgcca gcgccgacat cctgcgtgac
     3661 cggttccggg acgtcacggt ctcgaccgtc atcggtaccg ggctcatcgc ctgtactcag
     3721 ggcgggctgg tggcgatcgg gttctgggtg acggggattt ccaacgcgct cttctgggga
     3781 ctcgtgacag tggtcttcgc gatcctgcca gtggtcgggg ctgggctggt gtggggacca
     3841 ggcgcaatca cgctgctgct cgaccatcgc tacggagcgg ccgcggtgct gatcgttctt
     3901 ggcatcgtgg tggtggggaa tgtcgatgtc ctgatccggc cgatgatctt ccggcgctac
     3961 gcccagatcc acccgctggt gacgctggtc ggcgcgatcg gcggggtagg gtattttggt
     4021 ctgctcggca tcctgatcgg gccgctggcg gtgtcgtact tcttcgaact catccggatg
     4081 taccaggcag agtacctgcc gggcggtgag ccaattcccg cccaagcgac cacgtcgacc
     4141 gagtcctctc catgaccact gaggcgcccc ggaaggatcc gcgtatgctg gtgaaggacc
     4201 ccgacggcct caacacgggg ccgccgccgg gtctcctgac cgatcccatc acgccgacgg
     4261 ccatcctgtt cacccggagc catgcgccgg tgccccatgt ggacgccgcc agctaccgtc
     4321 tccgggtatc gggtctggtc cgcaatccgc tcgagctctc gctggccgat ctcgccgggt
     4381 tcgctcggcg ggaggagacc gccaccctca tctgcgccgg tctccgccgt tcggagctgg
     4441 aagcggtccg cccggtgcct ggcgagctcc tgtggggcgc cgagccggtg gggacgggcg
     4501 tctggtccgg tgtgcccctc cgcgaggtgc tggcgcaggc ccaagtcatg gggcccgcct
     4561 cgcacgtcga gttcatcggc ctcgaccagg tggagcgcgg ggggaaggtg ttcgggttcg
     4621 gcggctcggt gccgctcgag aaggcgaccg gtaccgaggt gctgcttgcc gaccggctca
     4681 acaaccttcc gctccccgcc gagcatggct ttccgctccg ggcgctggtg ccggggtact
     4741 atggagcccg cagcgtgaaa tggctgggag agatcgtggt ccgcgagggc ggctcggcca
     4801 actacttcca gacccaggcc tatcgagtgc tcgcgacccc gcggagtgac gatccccgcg
     4861 ctgtccgaga cggcaccgag ctgggcgagc tggtgctcaa ttccgtgatc agcgcgccgg
     4921 agtctggcgc cagggtaccg cctggaaggt gcgttatgtc cgggtgggcc atcggcccag
     4981 gaggacaggc gcttgcccga gtggaagtct cacccgacgg cggctccagc tggagcgaag
     5041 cccaggtcct gcctgccgac ggcgactttg cctggcgcca ctggcgggcg acggtcaacc
     5101 tgacgtcggg acggcatacc ctcgtggtcc gtgccttcga caagaaaggt cgcggacagc
     5161 cggccgaact ggcggaggtc tggaatgtga agggatacgc caacaacgcc tggcaccggg
     5221 tggccgtcac cgcagccgat tgacgtcggc tcaccgcgat ataaccttcg gcaccttttc
     5281 cgcatccccg catgagcgcc ggaacacccg agccgacccg cgggctcgac aacgtcatcg
     5341 cgctttcctc gaccgtctgc cgcctctccg cggaagacgg tcggctggcc tatcgggggt
     5401 acgacgtccg caccctcggc gagcagtcga cctgggagga gaccgcctgc ctcctggtgc
     5461 ttggcacgct gccgaccagc gcggagctcc ggctgttcag caatcaggtg aagg
//
LOCUS       DATIFF010000942         2372 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1963500, whole genome shotgun sequence.
ACCESSION   DATIFF010000942 DATIFF010000000
VERSION     DATIFF010000942.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2372
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1963500"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1529
                     /locus_tag="VLD58_13815"
     CDS             <1..1529
                     /locus_tag="VLD58_13815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HSB55432.1"
                     /translation="RVKAESAKEQQAGRRQFEGGPVPTKYFDMLRRPEDRDPRGFIIP
                     SDQPDFLTATKFVNALIKSGVTVHRATSAFTVGGKSYPAGSYVVKSAQAYRPHVLDMF
                     EPQDYPNDIRYPGAPPVAPYDNAGYTLAMQMGVKYDRILDGFDGPFVKLDGPIAKPPV
                     TVALGSGQAYLIDRRINDAFLAVNRLLAAKQPVQVTTQPMAANGTTYPAGTWYVPAAA
                     QSTEILRKLADEKGLPAVAVNSAGATAPVRPVRVGLWDQYGGSMPSGWLRYMFEQFEF
                     PFEVVYPQRLDAGNLNSQFDVLVFVSGGIPAPPSGNEVSGFFRGGTQPATDLPDEFKG
                     WTGRVTVEKTIPQLKSFLENGGRIVAIGSSISLAQHLGLPVGNHLVERTSQGVVRPLP
                     REKFYVPASLLEVAVDNTAPSALGMGSRAIVMFDESPVMELEPDAPMRGVRPVAWFDS
                     ATPLRSGWAWGQTFLEGGIAAAEATVGKGTLYLFGPEITFRSQPHGTYKFLFNAIYGR
                     "
     gene            1661..>2372
                     /locus_tag="VLD58_13820"
     CDS             1661..>2372
                     /locus_tag="VLD58_13820"
                     /inference="COORDINATES: protein motif:HMM:NF012350.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-transporting P-type ATPase"
                     /protein_id="HSB55433.1"
                     /translation="MPTVSPSPEPTARPASELAAAQVLAELATAPAGLSTAEAARRLA
                     VTGPNVLPARGERPAARIVREQLANPLVLILLAALVVAQALGERLDALVILLIVVINL
                     VLGFWQEFRAERALSTLSRLLDQRATLRRDGVTLDLPAREVVPGDIVELEIGDIVPAD
                     LRLLEVTGLECDESILTGEALPVLADGFTEGRRIFANTIKYVLMGTSSNFGNMFSAAG
                     AFLFLSFLPMLPSQILLNN"
BASE COUNT          361 a          834 c          791 g          386 t
ORIGIN      
        1 acagggtcaa ggcggagtcg gcgaaggagc agcaggcggg ccggcgacag ttcgagggcg
       61 gtccggtgcc gacgaagtat ttcgacatgc tccgccgccc cgaggaccgg gacccgcggg
      121 gcttcatcat cccgagcgac cagcccgact tcctgacggc caccaagttc gtcaacgcgc
      181 tcatcaagtc cggggtgacg gtccatcggg ccacctcggc gttcaccgtc ggcgggaagt
      241 cgtatccggc cggatcctac gtggtgaagt cggcgcaggc ctaccggccc cacgtcctcg
      301 acatgttcga gccccaggat tacccgaatg acatccgcta tcccggcgcg ccgccggtgg
      361 ccccgtacga caacgcgggc tacaccctag cgatgcagat gggggtcaag tacgaccgta
      421 tcctcgacgg cttcgatgga ccgttcgtca agctcgacgg cccgatcgcc aagccgccgg
      481 tcacggtggc gctcggcagc gggcaggcat acctgatcga ccggcggatc aacgatgcct
      541 tcctcgcggt caaccgcctg ctcgccgcga agcagccggt gcaggtcacg acccagccga
      601 tggcggcgaa cggcaccacg taccccgccg gcacctggta cgtgcccgcc gccgcccagt
      661 ccaccgagat cctccgcaag ctggccgacg agaagggact cccggccgtc gccgtgaatt
      721 cggcgggcgc caccgcgccg gtccggccgg tgcgagtggg gctctgggac cagtacggcg
      781 gctcgatgcc gtccggctgg ctccgttaca tgttcgagca gttcgaattc ccctttgagg
      841 tggtctatcc gcagcgcctc gacgcgggga atctcaattc gcagttcgat gtcctggtct
      901 tcgtgagcgg aggcattccc gccccgccct cggggaacga ggtcagcggg ttcttccggg
      961 gcggcaccca gcccgccacc gaccttcccg acgaattcaa ggggtggacc ggccgggtga
     1021 cggtcgagaa gacgatcccc cagctgaaga gtttcctcga gaacggcggc cggatcgtcg
     1081 cgatcgggag ctcgatctcc ctggcccagc acctgggcct tccggtgggg aaccacctgg
     1141 tcgagcgcac ctcccagggg gtcgtgaggc ccctgccgcg cgagaagttc tacgtcccgg
     1201 cctcgctcct cgaggttgcg gtggacaaca ccgccccgtc ggcgctcggg atgggaagcc
     1261 gggccatcgt catgttcgat gagagcccgg tgatggagct cgagcccgac gctccgatgc
     1321 ggggggtgcg gccggtggcc tggttcgact cggcgacacc gctccggagc ggctgggcgt
     1381 ggggacagac cttcctcgag ggaggaatcg ccgccgccga agcgacggtg ggcaagggga
     1441 cgctctacct gttcggcccc gagatcacct tccgttcgca gccgcacggc acgtacaagt
     1501 tcctgttcaa cgcgatttac gggcggtagg aagggcggga agtcggaagg acggtaggac
     1561 ggtactacga cggtacgcga gacgtgtacc gtcttaccgt cttaccgtct tgccgtcttg
     1621 ccgtcttacc gtccgtctac cctcgtcgcg tccaggttcc atgcccacgg tgtcgccctc
     1681 tccggaaccg actgcccgcc ccgcctcgga gctggcggcg gcgcaggtgc tggcagaact
     1741 cgccaccgct ccagccgggc tctccacggc agaagccgcg cgccggctcg cggtcaccgg
     1801 gcccaacgtc ctgcccgccc gtggggagcg gcctgcagct cgcatcgtgc gggagcaact
     1861 ggccaacccg ctcgtcctca tcctcctcgc ggcgctggta gtcgcccagg cgctgggcga
     1921 gcggctggac gcgctcgtga tcctgctgat cgtggtgatc aacctcgtgc tcggcttctg
     1981 gcaggagttc cgggccgagc gggcgctgag caccctgtcc cggctcctgg accagcgcgc
     2041 gaccctgcgc cgggacggcg tcacgctcga cctccccgcg cgggaagtcg tccccggaga
     2101 catcgtcgag ctggagatcg gcgacatcgt cccggccgac ctgcggctgc tggaggtgac
     2161 cggcctggag tgcgacgagt cgatcctgac cggtgaggct ctgcccgtgc tggcggacgg
     2221 tttcaccgag ggccggcgga tcttcgccaa caccatcaag tacgtcctga tgggcacgtc
     2281 cagcaatttc gggaacatgt tctccgccgc cggcgcgttc ctgttcctgt ccttcctgcc
     2341 gatgctgccc tcacagatcc tgctcaacaa cc
//
LOCUS       DATIFF010000943         3976 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_272387, whole genome shotgun sequence.
ACCESSION   DATIFF010000943 DATIFF010000000
VERSION     DATIFF010000943.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3976)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3976)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3976
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_272387"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1356)
                     /locus_tag="VLD58_13825"
     CDS             complement(<1..1356)
                     /locus_tag="VLD58_13825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase"
                     /protein_id="HSB55434.1"
                     /translation="MRRTPALLFLVAAALVSLRPAPLSARQADPALLAALHWRPIGPF
                     RGGRTKAAAGVPSRPSVFYIGAVNGGVWKTTDYGRTWRPIFDQQPTGSIGAIAVAPSN
                     PDVLYVGSGEGLQRPDLSTGDGVYKSTDAGATWTHLGLRDGQQIPQIAVDPRSPDRLF
                     VAVLGHPYGPNEERGIFRSTDGGRTFEKVLYRNENTGGVDVVLDPANPDIVYAVLWEA
                     RQAPWENGAFSGPGSGLYKSVDGGTTWRQLGGGLPTFEKDGLGRIGVTVAPSDPRRLY
                     ATVAVRGGGFLYRSDDAGESWRRVSEDGRIAGRPDDFAEVKVDPANPDIVYTASVVTW
                     KSTDGGKSWTGIRGAPGGDDYHRIWINPLDPKIILIAADQGAIVTVNGGETWSSWYNQ
                     PTAQFYHVSADNAFPYRVCGGQQESGSACVASRGNDGQITGREWHPVGVEEYGYAAPD
                     PL"
     gene            1455..2288
                     /locus_tag="VLD58_13830"
     CDS             1455..2288
                     /locus_tag="VLD58_13830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55435.1"
                     /translation="MRPLIALALLFIPAAALPQGSIPDGTFMAGLRYFESGKGLLPFD
                     KRVYGANFYVGTTRYMNLELHLGFPMPHPAAEFPLDCVFRQLGGGTVGRMHLEARIDA
                     GTIGAYYPMGSGYDKPGRWAVGTYAVICQSGEKKLDVGDFNIVASEEEERPFQSAGGR
                     VIRVRTFAGARGFTPENEGAYSSTFDASSLRGVGLSIEVSHKAIRDITGVRFSCVFWN
                     SRGVIGETGVRDVMQPGHTTEKFSIWTGFDTPGRWPPGRYNVECRELGKQLFQTQFDV
                     R"
     gene            complement(2304..2849)
                     /gene="msrA"
                     /locus_tag="VLD58_13835"
     CDS             complement(2304..2849)
                     /gene="msrA"
                     /locus_tag="VLD58_13835"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HSB55436.1"
                     /translation="MTERATFAGGCFWCLEAVFLPLRGVSRVVSGYTGGNTPNPSYQA
                     VCSGMTGHAEAIEISFDPAVISYRTLLELFFAFHDPTTLDRQGPDEGTQYRSAIFAHS
                     REQAETARAVIAGLDAEGVFPDPIVTEVCTAGPFYSAESYHQDYYRRNPDRAYCRAMI
                     GPKVAKLRSRYRELLRSAPDR"
     gene            complement(2868..>3976)
                     /locus_tag="VLD58_13840"
     CDS             complement(2868..>3976)
                     /locus_tag="VLD58_13840"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HSB55437.1"
                     /translation="LFAGELTWAEKGAALYFNSGNHGETHFYRLDLATKQIRPITKGP
                     RAVRRLSLNETTGTMAYAGNDFTHPDEIFIAKQDGSGERRLTGVNDATLERLTMMPVE
                     RMTYKGADGWDVDGFLVKPVGWQPGKKYPMILNIHGGPAGMYGVDWYHEFHVYSGMGW
                     AVFFTNPRGSTGYGHRFERGINLQWGGNDFVDIMKGVDAVLAANSWIDTTRLGVTGGS
                     YGGYMTNWIVGHTDRFKAAVTLRSISNFISDDGTRDGAYGHADDFGGDIFQKQDLFWD
                     RSPIKYVQNVKTPILILHSDNDYRVPIEQGEQWFRALRHFGKTAEIVFFPRENHNLTR
                     TGEPKHLVESLDWQVWWFQRYLEGRTDLPAPNRR"
BASE COUNT          598 a         1308 c         1412 g          658 t
ORIGIN      
        1 gagggggtcg ggcgcggcgt agccgtactc ctcgacaccg accgggtgcc actcgcgtcc
       61 ggtgatctgt ccgtcgttgc cccggctcgc gacgcaggcg gagccgctct cctgctgccc
      121 cccgcagacc cggtagggga aggcgttgtc ggcgctcacg tggtagaact gcgcggtggg
      181 ctggttgtac cagctgctcc aggtctcgcc gccgttcacg gtgacgatgg cgccctggtc
      241 ggcggcgatg aggatgatct tcggatcgag cgggttgatc cagatgcggt ggtagtcatc
      301 gccaccgggt gcgccgcgga tgccagtcca gctcttcccg ccgtcggtgg acttccaggt
      361 gacgacgctc gcggtataga cgatgtcggg gttggccggg tccaccttca cttcggcgaa
      421 gtcgtcgggc cgcccggcga tgcggccgtc ctcggagacc cggcgccagc tctcccccgc
      481 gtcgtcggag cggtagagga agccgccgcc ccgcacggca acggtggcgt agagccgccg
      541 cgggtcactg ggcgccaccg tcaccccgat ccggccgagg ccgtccttct cgaaggtggg
      601 gaggccgccg ccgagctggc gccaggtggt gccgccgtcc accgacttgt acagtccgct
      661 ccccggcccg ctgaaggcgc cattctccca gggcgcctgc cgcgcctccc agaggacggc
      721 atagacgatg tccgggttgg cggggtcgag cacgacgtcc acgccgccgg tattctcgtt
      781 ccggtagagc accttctcga aggtccggcc cccgtcggtc gagcggaaga tgccgcgctc
      841 ctcgttaggt ccgtaggggt gccccaggac ggcgacgaaa aggcggtcgg gagagcgcgg
      901 gtccaccgcg atctggggga tctgctggcc gtcccgcagc ccgagatggg tccaggtggc
      961 gcccgcgtcg gtggatttgt acacgccgtc gccggtggag agatcggggc gctggagccc
     1021 ctcgccgctc cccacgtaga ggacgtccgg gttcgagggc gcgacggcga tggcgccgat
     1081 ggagccggtg ggctgctggt cgaagatggg gcgccaggtc cggccgtagt cggtggtctt
     1141 ccagaccccg ccattcaccg cgccgatgta aaagacgctc ggccgcgacg gcacccccgc
     1201 ggccgccttg gtgcgcccgc cgcggaaggg gccgatggga cgccagtgaa gggcggcgag
     1261 gagcgcgggg tccgcctggc gggcggaaag cggagccggc cggagcgata cgagggcggc
     1321 cgcgacgagg aagaggaggg caggggttcg gcgcacgatc ggatcctggg gggtcgggtg
     1381 gcgggaagtt atctcccccc gcctcgcggc gcgccccgcg cgcggtagat tcgggcagga
     1441 ggtgattccc cccaatgcgc ccactcatcg cactggctct gctcttcatc cccgccgccg
     1501 ccctcccgca gggctccatt cccgacggca ccttcatggc cggcctccgc tatttcgaga
     1561 gcggcaaggg gctgctcccg ttcgacaagc gcgtctacgg cgccaacttc tacgtcggca
     1621 ccacccggta catgaacctc gagctccacc tcggcttccc catgccccac ccggccgcgg
     1681 aattcccgct cgactgcgtg ttccgtcagc tcggtggcgg aaccgtcggc cggatgcacc
     1741 tcgaggcccg gatcgacgcg ggtacgatcg gcgcgtacta cccgatgggc agcgggtacg
     1801 acaagccggg gcggtgggcc gtcggcacct acgcggtcat ctgccagagc ggagagaaga
     1861 aactcgatgt cggggacttc aatatcgtcg ccagcgagga ggaagagcga cccttccaga
     1921 gcgcgggggg ccgggtgatc agggtcagga ccttcgccgg ggcacgcggc ttcaccccgg
     1981 agaatgaggg ggcgtacagc agcaccttcg atgcctcgtc gctccgcggg gtgggcctct
     2041 cgatcgaggt gagccacaag gcgattcgcg acatcaccgg ggtccggttc agctgcgtct
     2101 tctggaattc ccggggggtg atcggggaga ccggtgtgcg cgacgtgatg caacccgggc
     2161 acaccaccga gaagttcagc atctggaccg gcttcgacac gccgggccga tggccgccgg
     2221 ggcgctacaa cgtcgagtgc cgtgagctcg gaaagcagct cttccagacg cagttcgacg
     2281 tgcgctgatc ggggccggct tctctagcgg tccggcgccg accggagcag ctcgcggtag
     2341 cggctccgga gcttcgccac cttggggccg atcatcgccc tgcagtacgc cctgtcggga
     2401 ttccgccggt agtagtcctg gtggtacgac tcggcggaat agaagggtcc cgccgtacag
     2461 acctccgtca cgatcggatc gggaaagaca ccctccgcgt ccagtccggc gatcaccgct
     2521 cgcgccgtct cggcctgctc ccgcgaatgg gcgaagatcg cggagcggta ctgggttccc
     2581 tcgtcgggcc cctggcggtc gagcgtggtc gggtcgtgga aggcgaagaa gagctcgagg
     2641 agggtccggt aggaaatgac cgccgggtcg aaggagattt cgatcgcctc ggcgtggccc
     2701 gtcatgcccg agcagaccgc ctggtagctt gggttcgggg tattcccgcc ggtatatccg
     2761 gagacgacgc gactcacccc tcggagcggg agaaagaccg cctccaggca ccagaagcaa
     2821 ccgccggcga aggtggcgcg ctcggtcacg ggtccggacc cggtcatcta gcgacggttc
     2881 ggggccggga gatcggtcct tccctccagg tatcgctgga accaccagac ctgccagtcg
     2941 aggctctcga cgaggtgctt cggctccccg gtccgggtca ggttgtggtt ttccctgggg
     3001 aagaagacga tctcggcggt cttcccgaag tgccggaggg cgcggaacca ctgctccccc
     3061 tgctcgatcg gcacccggta gtcgttgtcg gagtggagga tcaggatcgg cgtcttcacg
     3121 ttctgcacgt acttgatcgg ggagcgatcc cagaacaggt cctgcttctg gaagatgtca
     3181 ccgccgaaat catcggcgtg gccgtaggcg ccgtcgcggg tgccgtcgtc gctgatgaag
     3241 ttggagatgc tccgcagcgt caccgccgcc ttgaagcggt cggtatggcc cacgatccag
     3301 ttggtcatgt agccgccata gctcccgccg gtaacgccga gccgggtggt gtcaatccat
     3361 gagttggcgg ccagcaccgc gtccacgccc ttcatgatgt cgacgaagtc attcccgccc
     3421 cactgcaggt tgatcccccg ctcgaaccgg tgcccgtagc cggtcgagcc gcgcggattg
     3481 gtgaagaaga cggcccaccc catcccgctg tacacatgga actcgtggta ccagtccacg
     3541 ccatacatcc cggcgggtcc gccgtggatg ttgaggatca tcgggtactt cttcccgggc
     3601 tgccagccga cgggcttcac caggaagccg tccacgtccc agccgtcggc ccccttgtag
     3661 gtcatccgct cgaccggcat catcgtcagg cgctcgagcg tggcgtcgtt gacgccggtg
     3721 agtcggcgct cgccggagcc gtcctgcttc gcgatgaaga tctcatcggg gtgggtgaag
     3781 tcgttcccgg cgtaggccat ggtgccggtg gtctcgttga gcgagagccg gcgaacggcg
     3841 cgggggcctt tcgtgatggg ccggatctgc ttcgtggcga ggtcgaggcg atagaagtgg
     3901 gtctcgccgt ggtttcccga attgaaatag agcgcggcgc ccttctcggc ccaggtgagc
     3961 tcgccggcga agagat
//
LOCUS       DATIFF010000944         2279 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1041693, whole genome shotgun sequence.
ACCESSION   DATIFF010000944 DATIFF010000000
VERSION     DATIFF010000944.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1041693"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            116..499
                     /locus_tag="VLD58_13845"
     CDS             116..499
                     /locus_tag="VLD58_13845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55438.1"
                     /translation="MTGLPDEVYRFLYQHIDSVEQLEVLLLVRRSPGRSWSAADVARD
                     LYSHPSSIAQRFASLLGAGLLRESAPGFFQYAPRSAELDQTVGRLDEVYRERRVAVIS
                     LIASKPIENVKAFSDAFRIRKKKEE"
     gene            499..756
                     /locus_tag="VLD58_13850"
     CDS             499..756
                     /locus_tag="VLD58_13850"
                     /inference="COORDINATES: protein motif:HMM:NF039620.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5985 family protein"
                     /protein_id="HSB55439.1"
                     /translation="MAAAVYVLCALTSLACAVLLLRGWVQRRVRLLLWSGLGFVGFAL
                     GNAVLVVDLVILPEQDLALLRNLPVLAGLAVLVYGLVWDTQ"
     gene            753..1061
                     /locus_tag="VLD58_13855"
     CDS             753..1061
                     /locus_tag="VLD58_13855"
                     /inference="COORDINATES: protein motif:HMM:NF039620.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5985 family protein"
                     /protein_id="HSB55440.1"
                     /translation="MTRASLLVEVISGAIVMGYGVCALFFLRFWRRTHDRLFLVFSLA
                     FWLLALQRLALVLTEPVEEWRTGLYLVRFFAFLLILGAIIDKNRATERAGLAAGPEPE
                     "
     gene            complement(1074..1223)
                     /locus_tag="VLD58_13860"
     CDS             complement(1074..1223)
                     /locus_tag="VLD58_13860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55441.1"
                     /translation="MTQPEAVEMILHKASRECPMIEPHRREICGLIRERLRRQGHPPP
                     SAPTP"
     gene            complement(1220..1894)
                     /locus_tag="VLD58_13865"
     CDS             complement(1220..1894)
                     /locus_tag="VLD58_13865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55442.1"
                     /translation="MVRPLLLALLCLAGRAASAPAQFEVQGFLGSSVSLPSPLRVSQE
                     GQPDLSFTAHWATRPMLDTWYYAGRVAVWKGNRGWLFDFTHHKVYLTNAPPEIQKFRI
                     TNGMNMFTLSRGFRRGNLSYAIGAGPVITFPISRVRGRKLEGDRGFLGGYFLSGGHVM
                     ASATRRFPVAGGLFVSLDGRASASYVRVPVAGGHASVPNLALHIHGGLGYLLGPPPAA
                     PKEHQP"
     gene            complement(1902..>2279)
                     /locus_tag="VLD58_13870"
     CDS             complement(1902..>2279)
                     /locus_tag="VLD58_13870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55443.1"
                     /translation="AQHFPIARTGISSFVPHTEAPVHEARGREARLRSDFDYLYPDIE
                     PGVWHPVELLINRVAAMLYGDRAKAGSITGARLLRDDHFEFRGASPRPAGLPAELSRL
                     SDAGIEPEQAARDIADRRLPPRP"
BASE COUNT          328 a          753 c          825 g          373 t
ORIGIN      
        1 gtccagcgca tcatccaccg ccatggcggc cgggtctggg ccgagggcat ggtgggacag
       61 ggcgccacgt tccacttcac gatcggtcgg gttcgggcgt gagtcggctc gcctgatgac
      121 cggcctcccc gacgaggtct atcggttcct ctaccagcac atcgactcgg tcgagcagct
      181 cgaagtcctg ctgctggtgc gccgctcccc cgggcgaagc tggtccgcgg cggacgtggc
      241 ccgcgatctg tacagtcacc cgagctccat cgcccagcgg ttcgccagtc tgctgggggc
      301 gggcctcctt cgggagagcg cgccgggatt cttccagtac gccccccgca gcgccgagct
      361 ggatcaaacg gtggggcgtc tggacgaggt gtaccgggag cgacgggtcg cggtgatctc
      421 gctcatcgcg tccaagccga tcgagaacgt gaaggcgttc tccgacgcgt tccgtatccg
      481 gaagaagaag gaggagtgat ggcggccgcg gtctacgtgc tctgtgcgct gaccagcctg
      541 gcatgcgcgg tgctcctgct ccgagggtgg gtccagcgcc gggtccggct gctgctctgg
      601 agcgggctgg gcttcgtggg gttcgcgctg ggcaacgcgg tgctggtagt ggatctcgtg
      661 attcttcccg agcaggacct ggccctgctg cgcaacctgc cggtgctcgc cggcctggcg
      721 gtgctggtat acggtctcgt gtgggatacc caatgactcg cgccagcctg ctcgtcgagg
      781 tgatctcggg cgccatcgtg atgggctacg gcgtctgcgc tctgttcttc ctgcgcttct
      841 ggcggcggac gcacgaccgg ttgttcctgg tgttctcgct cgccttctgg ctgctggccc
      901 tccagcgact ggcgctcgtc ctcaccgagc cggtggagga gtggcggacc ggcctctacc
      961 tggtccggtt cttcgccttc ctgctgatcc tgggcgccat catcgacaag aaccgggcga
     1021 ccgaacgggc cggactcgcc gccggccccg aaccggagta ggagcagcgg gcctcagggg
     1081 gtcggggccg acggcggagg atgcccctgg cgccgcagcc gctcgcggat gaggccgcag
     1141 atctcgcggc ggtggggctc gatcatgggg cactcgcggc tcgccttgtg gagaatcatc
     1201 tccaccgcct cgggctgggt catggttgat gctccttcgg ggcggccggc gggggaccga
     1261 ggagatatcc caggccgcca tggatgtgca gggccaaatt gggcacggac gcgtgaccgc
     1321 ccgcgaccgg cacgcggacg tacgaggccg acgcccggcc gtccaggctc acgaacaacc
     1381 cgcccgcaac gggaaaccgc cgggtcgcgc tggccatgac gtggccgccc gacaggaagt
     1441 agccgccgag gaagccccgg tcgccttcca gcttccggcc ccgcacccgg ctgatgggaa
     1501 acgtgatcac cggcccggcg ccgatcgcgt agctcagatt gccccgacgg aatccccggc
     1561 tcagcgtgaa catgttcatg ccgttcgtga tccggaattt ctggatctcg ggcggcgcgt
     1621 tggtgagata gaccttgtgg tgagtgaagt cgaacagcca gccgcggttc cccttccaca
     1681 ccgccacgcg tccggcgtaa taccacgtgt ccagcatggg ccgggtggcc cagtgcgccg
     1741 tgaacgagag gtcgggctgt ccctcctggg acacgcgcaa cggcgacggc aggctcaccg
     1801 aggagccgag gaagccctgg acctcgaact gtgcgggggc cgatgccgct cgtccggcca
     1861 gacagagcag ggcgaggaga agggggcgga ccatggaggc tctaggggcg gggtgggagc
     1921 cgccggtcgg caatgtcgcg cgcggcctgc tcgggctcga tgccggcgtc gctcaggcgg
     1981 ctcaactctg cgggcaggcc ggccgggcgg ggtgaagccc cgcggaactc gaagtgatcg
     2041 tcccgcagca gccgcgcgcc ggtgatggac ccggccttcg cgcggtcgcc gtacagcatg
     2101 gctgccaccc ggttgatcag cagctcgacc gggtgccaca ccccaggctc gatgtcgggg
     2161 tacagatagt cgaaatcgga acgcagcctg gcctcacgcc ctcgcgcttc gtgcaccggc
     2221 gcctccgtgt gggggacgaa ggaggatata ccggtccggg cgatcgggaa atgctgcgc
//
LOCUS       DATIFF010000945         3012 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_579352, whole genome shotgun sequence.
ACCESSION   DATIFF010000945 DATIFF010000000
VERSION     DATIFF010000945.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3012
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_579352"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2960)
                     /locus_tag="VLD58_13875"
     CDS             complement(<1..2960)
                     /locus_tag="VLD58_13875"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HSB55444.1"
                     /translation="MFPHLHVHSWFSFQAGVSSPEVLCRAAAARGFSTLACTDTNGVY
                     GAVEFQQTALAHGLRPILGAHLVAGEQETLALATDERGWAALCRAITAIHWTGRRSGG
                     QELHAGAFQLANQLAADRDGLILLSSDIKLIDQVARLSGSRDLYAELKPGKERHAVGA
                     AAKRLGIPAVVTGAVMFANPEEWQTHQLRVAIARNAAISSVNQDTKGARDSWLRPVAE
                     LARHFPDCPDALARAADIAERCQYRIPVGNRVISPRFACPDDAFERLRAMAYAGAERR
                     YGTIAPITRDRLEHELAIIGAKRFADYFLVVHDIVQHGPTHCGRGSVANSIVSYALGI
                     THVDPLGSGLLFERFLNPERKDPPDIDLDFPWDERDDILAWVFRKYPHPRAAMVANHN
                     CFRLRGALREVAKAHGRPPGEIREITRRFPWFMEEESIGEVLEKHPNFGQLELPKVWQ
                     ELARMAQPLVGVPRHLSLHPGGVVIVPQALTDYVPVEPAAKVLEHNADLTVPVIQFEK
                     DGAEDCGLVKIDLLGNRSLAVIRDAIAEVKTNTGIEIDYTSSDPEDDEPTRALFRTGQ
                     TMGVFYTESPASRLLCAKSRADTFDLLVLNTSIIRPASNTFIRIYLERLHGAPYQPLD
                     PSLRDTLAETFGVMVYQEDVVNVCATFAGMPLSSGDGLRKALSKKRPVKQLAAYAEEF
                     FAGAARLGRDTETAKRVWAMVMSFAGYSFCKGHSCSYIRVAQHSCFLRANHPAEFMAA
                     VLANGGGFYHPFAYVAESMRMGLTVHPPDVNASRFRTTGRGREVRIGFQFIKGLSDGA
                     VEAIEAGRRPFTSFDDFRRRTSLRHDDLRLLIQVGAFDSIAGGMTRPMLLWTVDAEAN
                     SEPGARDQELQFGPLARQSTGSPRLREYSVERRRRTEYELLGFTTDSHPMDLFRDELA
                     RLRITLSVDLARHVGKTVVCCGMLTTSKPVHTAKDEPMEFATFDDGTGLIEAVLFPKV
                     YHDRGHVLFDQGPF"
BASE COUNT          491 a          949 c         1093 g          479 t
ORIGIN      
        1 atgaaggggc cctggtcgaa tagaacgtgc ccccgatcgt gatagacctt cgggaagagc
       61 accgcctcga tgagccccgt gccgtcatcg aatgtcgcga actccatcgg ctcgtccttg
      121 gcggtatgca ccggtttgga agtggtgagc attccgcagc acaccaccgt cttcccgacg
      181 tgccgtgcga gatcgacgct gagagtgatg cggagccggg ccagctcgtc ccggaagaga
      241 tccatggggt ggctgtcggt ggtgaagccg agcagctcgt actcggtgcg gcggcggcgc
      301 tccacgctgt actcgcggag gcggggcgaa ccagtggact ggcgggccag cggaccgaat
      361 tgaagttcct ggtcccgggc accgggttcc gagttggcct cggcatcgac cgtccacagc
      421 agcatcggcc gggtcatccc gccagcgatc gagtcgaagg cgccgacctg gatcagcagg
      481 cggaggtcat cgtggcgcag gctggtgcgg cggcgaaagt cgtcgaagga ggtgaatggc
      541 cgccggcccg cctctatcgc ctccaccgca ccatccgaca accccttgat gaactggaac
      601 ccgatccgca cctcgcgccc cctgccggtg gtgcggaagc ggctggcgtt cacatcgggg
      661 ggatgcacgg tgaggcccat ccgcatcgat tcggcgacgt aggcaaaggg gtgatagaac
      721 ccgccgccgt tggccagcac cgccgccatg aactccgcgg ggtgattggc gcggagaaag
      781 caggagtgct gcgccaccct gatgtaggag caggagtgcc ccttgcagaa gctgtagccc
      841 gcgaacgaca tcaccatcgc ccacacccgc ttggcggtct cggtatcgcg ccccagccgg
      901 gcggcgccgg caaaaaactc ctcggcgtag gccgcgagct gtttcaccgg ccgcttcttg
      961 gagagcgcct tccggagccc gtcaccggag gagagtggca tccccgcgaa ggtggcgcag
     1021 acgttcacca cgtcctcctg gtagaccatg acgccgaagg tctcggccag ggtgtcgcgc
     1081 agcgagggat cgagcggctg atagggcgcg ccgtgcagcc gctcgagata gatccggatg
     1141 aaggtgttgg aggctggccg gatgatgctg gtattgagca ccagcaggtc gaaggtgtcg
     1201 gcccgggact tggcgcagag gagccgggag gcggggctct cggtatagaa gacgcccatc
     1261 gtctggccgg tgcggaagag cgccctggtg ggctcgtcgt cctccgggtc gctcgaggtg
     1321 tagtcgatct cgatgccggt gttggtcttc acctccgcga tcgcatcgcg gatcaccgcc
     1381 agggagcggt tgccgagcag atcgatcttc accagtccgc agtcttcggc gccgtccttc
     1441 tcgaactgga tcaccggcac ggtgagatcg gcgttgtgct cgagcacctt ggccgccggc
     1501 tccaccggga cgtagtcggt gagcgcctgg ggcacgatga ccacaccgcc ggggtggagc
     1561 gagaggtgcc gcggcactcc caccagcggc tgcgccatgc gggccagctc ctgccagacc
     1621 ttcggcagct cgagctggcc gaagttgggg tgcttctcca gcacctcgcc gatcgattcc
     1681 tcctccatga accaggggaa gcggcgggtg atctcgcgga tctcgcccgg cgggcggccg
     1741 tgcgccttgg cgacttcgcg gagcgcgccc cggagccgga agcagttgtg gttcgccacc
     1801 atcgcggcgc ggggatgggg atacttccgg aacacccagg cgagaatgtc gtcccgctcg
     1861 tcccagggaa aatcgaggtc gatatcggga ggatccttcc gctcgggatt gagaaagcgc
     1921 tcgaagagga ggcccgaccc cagcgggtcg acgtgggtga tgccgagggc gtaactcacg
     1981 atcgagttgg cgacggagcc gcgcccgcag tgggtgggcc cgtgctgcac gatgtcgtgc
     2041 accaccagga agtagtcggc gaaccgcttg gcgccgatga tggcgagttc gtgctccagc
     2101 cggtcgcggg tgatcggcgc gatggtgccg tagcgccgct cggcgccggc ataggccatg
     2161 gcgcggagcc gctcgaaggc gtcgtcgggg caggcaaagc ggggcgagat gacgcggttc
     2221 cccaccggga tccggtactg gcagcgctcg gcgatgtcgg cggcgcgggc gagcgcgtcg
     2281 gggcagtcgg ggaaatgccg ggccagctcc gcgaccggac ggagccagga gtcgcgggcg
     2341 cccttggtgt cctgattcac actcgagatc gcggcgttcc gcgcgatggc cacccgcagc
     2401 tggtgggtct gccactcttc cgggttggcg aacatcaccg cgccggtcac cacggcggga
     2461 atacccaacc gcttcgccgc ggctcccacc gcgtggcgtt ccttccccgg cttcagctcg
     2521 gcgtagaggt cgcgagagcc cgagagccgg gcgacctggt cgatcagctt gatgtcggag
     2581 gaaaggagaa tcagcccgtc gcgatcggct gcaagctggt tggcaagttg aaatgcgcct
     2641 gcgtggagtt cctgaccgcc tgaccgtctg cctgtccagt ggatcgccgt gatcgcccgg
     2701 cagagcgcgg cccagccccg ttcgtcggtg gcgagcgcca gcgtttcctg ttcacccgcg
     2761 accaggtgcg cgccgaggat ggggcggagg ccgtgcgcga gagcggtctg ctggaattcg
     2821 acggcgccgt ataccccgtt ggtgtcggtg caggcgagtg tgctgaatcc acgcgccgcc
     2881 gcggcccggc agaggacctc agggctcgag accccggcct ggaaggagaa ccaggagtgg
     2941 acgtggaggt gggggaacat cggtcaaggg tcgcgagtca agggtcgtgg gtcgcattcg
     3001 ccgaatcaga cc
//
LOCUS       DATIFF010000946         1450 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2117983, whole genome shotgun sequence.
ACCESSION   DATIFF010000946 DATIFF010000000
VERSION     DATIFF010000946.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2117983"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..763
                     /locus_tag="VLD58_13880"
     CDS             <1..763
                     /locus_tag="VLD58_13880"
                     /inference="COORDINATES: protein motif:HMM:NF013974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55445.1"
                     /translation="GESPLPVIAPATPAGCFDSAVEAVRVAVRYRTPVILLSDTFLAN
                     SSEPWRIPSTAELPEIDPRFAEGPNADGEFLPYLRDKIGARPWAIPGTPGLQHRIGGL
                     EKEDGSGNISYDPGNHARMTALRAQKLESLAAEIADLAVDADEGAELLVLGWGSTYGV
                     VRATARRIRERGIPIALAHLRHLNPLPANTGEVVRAYPKVLVPELNTGQLSRILRSEF
                     LVDVRSYNKVEGMPILADDLEPVILEMLGKEEASE"
     gene            760..>1450
                     /locus_tag="VLD58_13885"
     CDS             760..>1450
                     /locus_tag="VLD58_13885"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HSB55446.1"
                     /translation="MSGNGGTPAALTKKQFQSDQETRWCPGCGDYAILANVQGLMPEL
                     GVPPERIVFVSGIGCAGRFVYYMDTYGMHGIHGRAPALATGLAASRPELSVWVVTGDG
                     DSLSIGGNHLIHALRRNVPIKILLFNNQIYGLTKGQYSPTSEMGKVTKSTPFGSQDHP
                     FNPLALALGAEATFVARAVDTDKKHVAEVLRAAAEHEGAAFVEIYQNCNVFNDGAFDA
                     LREKETRKRNMI"
BASE COUNT          237 a          520 c          492 g          201 t
ORIGIN      
        1 tggggagtcg ccgctgccgg tgatcgcgcc ggccacaccg gccggctgct tcgacagcgc
       61 ggtcgaggcg gtgcgggtgg cggttcgcta ccggaccccg gtgatcctgc tcagcgacac
      121 cttcctcgcc aactcctcag agccctggcg gatcccgagc accgccgagc tgccggagat
      181 cgacccccgc ttcgccgagg gcccgaatgc cgacggcgag ttcctgccct acctccgtga
      241 caagatcggc gcccgtccct gggcgatccc cggcactccc gggctccagc accggatcgg
      301 gggcctggag aaggaggacg gcagcggcaa catcagctac gaccccggga accacgcccg
      361 gatgaccgct ctgcgggcgc agaagctcga gagcctggcg gccgagatcg cggacctcgc
      421 ggtcgacgcc gacgagggag ccgagctgct ggtactcgga tgggggtcga cctacggggt
      481 cgtgcgggcg accgcgcgcc ggatccggga gcgcgggatc ccgatcgccc tcgcccacct
      541 gcgccacctc aacccgctgc ccgccaacac cggagaggtc gtccgcgcct acccgaaggt
      601 cctggtgccg gagctgaaca ccggccagct ctcgcgcatc cttcgctccg agttcctggt
      661 cgacgtccgc agctacaaca aggtcgaggg gatgccgatc ctggccgacg acctggagcc
      721 ggtgatcctc gagatgctgg gcaaggaaga ggcgtccgaa tgagcggcaa cggcggtacc
      781 ccggcggcgc tgaccaagaa gcaattccag tccgaccagg agacgcgctg gtgcccgggc
      841 tgcggcgact acgcgatcct cgccaacgtg caggggctga tgccggagct gggggtcccg
      901 ccggagcgga tcgtcttcgt ctccgggatc ggctgtgccg ggcgcttcgt ctactacatg
      961 gacacctacg ggatgcacgg gatccacggc cgcgccccgg cgctggccac cgggctcgcc
     1021 gcgtcgcggc cggagctgtc ggtgtgggtg gtcacgggcg acggcgactc gctgtcgatc
     1081 ggcggcaacc acctgatcca tgccctgcgc cgcaacgtgc cgatcaagat cctgctcttc
     1141 aacaaccaga tctacgggct caccaagggc cagtactcgc ccacttccga gatgggcaag
     1201 gtcaccaagt ccacgccgtt cggctcccag gaccatccct tcaacccgct ggcgctggcg
     1261 cttggcgccg aggccacctt cgtggcccgc gcggtggaca ccgacaagaa gcacgtggcc
     1321 gaggtgctgc gggccgcggc ggagcacgag ggcgccgcct tcgtcgagat ctaccagaac
     1381 tgcaacgtct tcaacgacgg cgccttcgat gccctgcgcg agaaggagac ccgcaagcgc
     1441 aacatgatcg
//
LOCUS       DATIFF010000947         1316 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_885281, whole genome shotgun sequence.
ACCESSION   DATIFF010000947 DATIFF010000000
VERSION     DATIFF010000947.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1316
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_885281"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..399)
                     /locus_tag="VLD58_13890"
     CDS             complement(<1..399)
                     /locus_tag="VLD58_13890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015351969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSB55447.1"
                     /translation="MTAPVFRERFFQGRVVFVTGGSSGINLGLAEAFGRAGARLAING
                     RNAEKLAAAVDGLRAGGVVAEGYAADVRDYQVLEGALSKAVTALGPIDVLVCGAAGNF
                     PAPAMAMSPNGFKAVVDIDLLGTFNACRAAF"
     gene            complement(478..1194)
                     /locus_tag="VLD58_13895"
     CDS             complement(478..1194)
                     /locus_tag="VLD58_13895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55448.1"
                     /translation="MNPPGVEHKLRLRALRFSWIKDVVQAVAFTAAGIWAIYTFWYRE
                     KYLPRVTEANVSAHVQLERLGEKDGTQALRITVSMENPGPAPARILGSTLIARGWRVL
                     STPPKERPRPAPNSPLERGAVTWIDRTLESHPDVLFNSVAVPESFDGVSNATVRPGGR
                     SEEETVLFLRADSYPYVTVEAQVAWLPLAHPLRKECYALIAQEDGSVSASVRSTAAQG
                     APPGNCRLSTTTASATIALR"
BASE COUNT          211 a          470 c          453 g          182 t
ORIGIN      
        1 gaaggcagcc cggcaggcgt tgaaggtgcc cagcagatcg atgtccacca ccgccttgaa
       61 gccgttgggg gacatcgcca tcgccggcgc cggaaaattc cccgccgcgc cgcacaccag
      121 cacgtcgatc ggccccagcg cggtgaccgc cttcgagagc gcaccctcca gcacctggta
      181 gtcgcgcacg tcggccgcat acccctcggc gacgacgccc ccggcacgca ggccgtccac
      241 cgccgccgca agcttctccg cgttgcggcc attgattgcc agcctggcgc ccgcgcggcc
      301 gaacgcctcg gcaaggccca ggttgatgcc gctcgagcca ccggtgacga acaccacccg
      361 cccctggaag aacctctcgc gaaagaccgg cgcagtcatg cgggtgcccg agcactctcc
      421 cgagccggac gcactgcgcg catccctccg gctgccccgt ccaggaccag tcggggttca
      481 gcggagcgcg atcgtggccg aggcagtggt ggtgctcagc cggcagttcc ccggtggcgc
      541 tccctgggcc gcggtcgacc tcaccgaggc gctgaccgat ccgtcttcct gggcgatgag
      601 ggcgtagcac tccttccgca acggatgggc cagcggcagc caggccacct gggcctccac
      661 ggtcacgtac gggtagctgt cggcgcggag gaagaggacc gtctcctcct cggagcgacc
      721 gccgggccgc acggtggcgt tgctcacgcc atcgaaggac tcgggcaccg cgacggagtt
      781 gaagagcaca tcgggatgcg actcgagcgt ccggtcgatc caggtgacgg cgccccgctc
      841 cagcggagaa ttcggcgccg gcctcgggcg ctccttgggc ggagtggaaa gcacccgcca
      901 gccccgggcg atgagcgtgc ttcccaggat gcgcgccgga gccggaccgg ggttctccat
      961 cgacacggtg atgcgaaggg cctgggtccc gtccttctct ccgagccgct ccagctggac
     1021 gtgcgccgag acgttcgcct cggtgacacg cggcaggtac ttctcccggt accagaacgt
     1081 gtagatggcc cagattccgg ctgcggtgaa ggcgacggcc tgcaccacgt ccttgatcca
     1141 cgagaaccgg agcgcccgga ggcggagctt gtgctccacc ccgggcgggt tcatgtcggt
     1201 gggcagggga gtctccggag tacgcacggg tgacaggcta gcagcagggt caccgggcag
     1261 acgacaacga gggtggtcca accgtcatcg ccgagtggtc gcaggcgtca gcgacg
//
LOCUS       DATIFF010000948         3026 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1809816, whole genome shotgun sequence.
ACCESSION   DATIFF010000948 DATIFF010000000
VERSION     DATIFF010000948.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3026
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1809816"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2617)
                     /locus_tag="VLD58_13900"
     CDS             complement(<1..2617)
                     /locus_tag="VLD58_13900"
                     /inference="COORDINATES: protein motif:HMM:NF044287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSB55449.1"
                     /translation="MPPRYFLRCLGTPELRSPGGEPVRFRTRKHMALLAFLAVEPRHH
                     HRRERLADLLWPDASPTEGRHSLATALSVIRGKLGPKTFESTRETVRFVAPDLEVDLD
                     RLARGDVLGDDLTPPLEMGGFLDDFEVSRAPEFALWRELRRAHWLPAIRRAFIVLMDR
                     CRRTGDFTTIETLADRLLGLDELSEDAIRAKMEGRAFAGDRMSALRIFQQWRRKLEEE
                     LGATPSELVEGMALRLRQRSLEPPGTAHIPTVPTDQWRDRAFVGRGSQYRVAYEHWEH
                     TRDSQGRHLLLLGDSGVGKTTLAERLVTATGLEGAVSSRVQCYEVEREIPYAAIGTLV
                     RGMLDRPGASGTPPEWLAELARTVPAVAQRYPNLPPARESEGEAARLRLTEAVHQLAS
                     AVAEEHPLILVVDDVHLADDASVAVLHLVMRSTQEQRIMVVLSAREPELARSPNASRL
                     KEVRHALALQPVELPPLTEEEMGQVVAALAEAHDCQLSPAVRRALLRASAGIPMIVEL
                     LFDDWRTHGDQCLALAIGAMTVDAEGTTAQDLFRQIVDRVVHNLSDVARAVLNLAAIL
                     GERLNDLPMYELVDLTLAQTLAGMSELTTMRILRDGGRDLEFRNELLRGYAYLSVPSP
                     HRRALHGLIADRLIAAEAKGETVRGLMLAWHCYRAGRTAEAKPYLLRGSREALHRGAS
                     FETELALRSAMDGLGGDHLARATLLLTEALQEQGRWHESLTALRALTTWPEHHHLASS
                     ALALRAEVGGAENREHYRRLLDQTIALLELPGDLEAKLPAVHTAARLVWLLPGERDLV
                     ARIDGLRPLAQTPSAKACVTSSTMTITWACKGMVEAGALRAVAAQVSEECAQAELENG
                     FRFGLENTRSCLDASL"
     gene            2816..>3026
                     /locus_tag="VLD58_13905"
     CDS             2816..>3026
                     /locus_tag="VLD58_13905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55450.1"
                     /translation="MRRLLAPVTALAMLAACNADLTDNGGGGGGGGGGPSVNRYTELS
                     SSLEDAAESEVSMMTIGVPGLPLSFP"
BASE COUNT          470 a         1036 c         1034 g          486 t
ORIGIN      
        1 caaggcttgc gtccaagcag cttctcgtat tctcgagtcc gaagcggaag ccgttttcga
       61 gctcggcttg ggcacactcc tcgcttacct gcgcggctac cgccctcagc gctccagctt
      121 cgaccattcc tttgcaggcc caggtgatgg tcatggtcga ggaagtgacg caggcctttg
      181 cagatggcgt ttgtgcgagg gggcgcagcc cgtctatccg cgcgacgaga tccctctcac
      241 ccgggagcaa ccacacaagg cgcgcggcgg tgtggacggc agggagcttg gcctcaaggt
      301 ctccgggtag ttccaatagg gcgattgtct ggtccaggag acgccgatag tgctcccggt
      361 tctccgcccc gccaacctcg gccctaagcg ctagcgctga gctggcaaga tgatggtgct
      421 cgggccaggt agtgagcgct ctcagcgcag tgagtgactc atgccacctg ccttgttctt
      481 gaagcgcctc ggtaaggagc agtgttgctc ttgccagatg gtctcccccg agtccgtcca
      541 tggcacttcg gagggccagc tccgtctcaa atgatgcacc acggtgaagg gcttcccgcg
      601 agccacgaag caggtatggc ttcgcttctg cggttcgacc cgcgcgatag cagtgccacg
      661 caagcatcag cccacgcacc gtctcgccct tcgcctcggc cgcaatcaac cggtccgcga
      721 tcaagccgtg cagcgcccgc cggtgcggtg aggggaccga gaggtacgca tacccacgca
      781 acagctcgtt gcggaactcg agatccctcc cgccatcccg caggatccgc atggtggtga
      841 gctcggacat ccccgccagc gtctgcgcca acgtcaggtc caccagctca tacatcggca
      901 gatcattcaa ccgctcgccc aggatcgccg cgaggttgag caccgcccgc gccacatcac
      961 tcaggttgtg taccacccgg tccacgatct gccggaagag atcctgggcc gtggtcccct
     1021 cggcgtcgac ggtcatcgcc ccgatcgcaa gggcgaggca ctgatccccg tgcgtgcgcc
     1081 agtcgtcgaa gaggagctcc acgatcattg gaatgccggc ggaggcgcgc agcagcgccc
     1141 ggcgcaccgc gggcgagagc tggcagtcgt gtgcctccgc cagcgcggcg acgacctggc
     1201 ccatctcctc ctcggtgagt ggtggcagtt cgaccggctg cagcgccagc gcgtgccgca
     1261 cttccttgag ccggctggcg ttgggcgaac gcgccagctc cggttcccgg gcggagagca
     1321 cgaccatgat gcgctgctcc tgggtgctgc gcatgaccag gtgcagcacc gcgacgctgg
     1381 catcgtcggc gagatggacg tcgtccacca ccaggatcag ggggtgttcc tccgcgaccg
     1441 cgctcgccag ctgatgcacc gcctccgtga gccggagccg cgccgcctcg ccttcactct
     1501 cgcgggcggg cggaagattg ggatagcgct gtgccacggc gggcaccgtg cgcgccagct
     1561 cggccagcca ttcggggggc gtgccgctcg cgccgggccg gtcgagcatg ccccgcacca
     1621 gggttccgat cgccgcgtag gggatctccc gctcgacctc gtaacactgg acccggctcg
     1681 agaccgcgcc ttcgaggccg gtggcggtca ccagccgctc ggccagggtg gtcttgccga
     1741 cgcccgaatc acccagcagc agcagatgcc ggccctggga gtcgcgggtg tgctcccaat
     1801 gctcataggc aacccgatac tgggagccgc gtcccacgaa ggcccggtcg cgccactggt
     1861 cggtgggtac ggtcgggatg tgggccgtcc cgggtggctc gaggcttcgc tggcggagcc
     1921 ggagggccat gccttcgacc agctcggacg gtgtggcccc aagctcctcc tcgagcttcc
     1981 ggcgccactg ctggaagatc cggagggccg acatccggtc gccggcgaag gcccgtccct
     2041 ccatcttggc ccggatcgcg tcctcgctca gctcgtccag accgagcagg cggtcggcca
     2101 gggtttcgat ggtggtgaag tcaccggtgc ggcggcaccg gtccatgagc acgatgaacg
     2161 cccggcggat ggcggggagc cagtgggccc ggcggagctc ccgccagagc gcgaattccg
     2221 gcgcgcggga gacctcgaag tcatccagga acccgcccat ctcgagcggc ggggtcaggt
     2281 cgtcgcccag cacatcgccg cgggccagcc ggtccaggtc gacctcgaga tcgggcgcga
     2341 caaagcgcac tgtctcccgg gtgctctcga atgtcttggg gccgagcttg ccgcggatga
     2401 ccgacagggc tgtggcgagg gaatgccgtc cctccgtcgg tgaggcgtcg ggccagagga
     2461 ggtcggccag ccgctcgcgc cgatggtggt gccgcggctc caccgccaga aacgccagga
     2521 gcgccatgtg cttcctggtg cggaagcgga caggctcacc tccgggcgat cgcagctcgg
     2581 gcgtgcccag acagcggagg aaatagcgag gcggcatggc ctcaggagta cgacacgagt
     2641 gtcaaccgac catcaaaccg gcgggccccg cggggcctga cgggccgccg cgtgaccggg
     2701 cgcgcgactc ccaaacggga acgtatgacg tggggcatgg ctgactatgc ggcgtcctct
     2761 ggagcgctgc aagggtctcc cgctaccttt cggtatccct acccgcgagt ccaccgtgcg
     2821 ccgcctccta gctcctgtca ccgccctggc catgctggcc gcctgcaatg ccgatctgac
     2881 cgacaacggt ggcggcgggg gcggtggtgg cggtgggccg agcgtcaacc gctataccga
     2941 actctcgagt tcgctggagg atgcggcgga gtcggaggtg tcgatgatga cgatcggggt
     3001 gccgggactg ccgctttcgt tcccgg
//
LOCUS       DATIFF010000949         2496 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1964264, whole genome shotgun sequence.
ACCESSION   DATIFF010000949 DATIFF010000000
VERSION     DATIFF010000949.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2496
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1964264"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1342)
                     /locus_tag="VLD58_13910"
     CDS             complement(<1..1342)
                     /locus_tag="VLD58_13910"
                     /inference="COORDINATES: protein motif:HMM:TIGR00225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HSB55451.1"
                     /translation="MKQRWGVIGLVAVISFLSGGWLLQRGVAAGGNVYQQARLFDDVL
                     SHVHNYYVDSIGETDLYDKATNGMLEELKDPYSVLLTGDDYKSLTEQTSGNYAGLGIQ
                     IDVRDGWITVVAPLPDTPAERAGIQTGDQIIEVDGKSTEGWKNDQAVKALRGEPGSKI
                     ALEVRRAGFADPIPYDLTRATIHIRSVPRGTLFDGGVGYISLNPVAETSAEELRDEVT
                     AMRAKGMKSMVLDLRLNPGGLLDQGVKVAELFLDKGQEVVSTRGRARGSSREFYDDIR
                     QPWPDLPIVVLVNEGTASAAEIIAGALQDHDRAVVVGAPTFGKGLVQTLFPLGDGVAL
                     KLTTARWYTPSGRTIQRVARNEEDQLEQAEAAGVNPAASDSAIRLRPVFHTDGGRVVR
                     GGGGIVPDIVVRPDTLTTAERDFAKALGSKLPVYRDVLTTYALELKRSKAIQNES"
     gene            complement(1371..2006)
                     /gene="tmk"
                     /locus_tag="VLD58_13915"
     CDS             complement(1371..2006)
                     /gene="tmk"
                     /locus_tag="VLD58_13915"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HSB55452.1"
                     /translation="MSGFFLVVEGAEGAGKSTLVEGLVARLRSAGIDPVSVREPGSTP
                     AAEAIRAAFLDPDHPLGPNTELLYVTAARAHLVQNVIRPALAAGRVVVSDRYDLSTHA
                     YQAAGRGLDPDRVAYVNQVATGGLRPHLTLVLDIPPELGRARQKAGGKGRDRLELEDP
                     RFHERVAAAYLAATGAGVRHLDGTAPPASVLDAAWGELVRTAPETFRKGGV"
     gene            complement(2003..2356)
                     /locus_tag="VLD58_13920"
     CDS             complement(2003..2356)
                     /locus_tag="VLD58_13920"
                     /inference="COORDINATES: protein motif:HMM:NF017902.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF family regulator"
                     /protein_id="HSB55453.1"
                     /translation="MIWDKAQELGRLIGQTPEYQALRRAETNLREDKETQAKLDQIQR
                     LARQVDQLVAQGQMPDQPTAEAYETAVRDLEASGTGQAYVVARANFEKLMTKVNQQIG
                     EGMEKGATSSIITLS"
BASE COUNT          355 a          915 c          801 g          425 t
ORIGIN      
        1 agctctcgtt ctggatggcc ttgctccgct tgagctcaag agcatacgtc gtgagcacgt
       61 cgcgatagac ggggagcttg gagccgaggg ccttggcgaa gtcgcgctcc gccgtggtca
      121 gcgtatcggg ccggaccacg atgtccggga cgatgccgcc gccaccccgc accacgcggc
      181 cgccatcggt gtgaaagacc gggcggaggc ggatggcgga atcggaagcg gcggggttga
      241 cgccggccgc ttccgcctgc tccagctggt cctcctcgtt cctggccacg cgctggatcg
      301 tacgcccgct gggcgtgtac caccgcgccg tggtgagctt gagggccacg ccatcgccca
      361 gggggaagag cgtctgcacc agccccttcc cgaacgtcgg agcgcccacc accaccgccc
      421 ggtcatggtc ctggagcgcg ccggcgatga tttccgccgc gctcgcggta ccctcgttca
      481 ccagtacgac gatcggcagg tccggccagg gctggcgaat gtcgtcgtag aactcccggc
      541 tcgacccgcg cgcccggccc cgcgtcgaga cgacctcctg ccctttgtcg aggaagagct
      601 ccgccacctt gacgccctgg tcgagcaggc cgccggggtt cagccggaga tcgagcacca
      661 tggacttcat ccccttggcc cgcatcgcgg tgacctcgtc gcgcagctcc tccgcggagg
      721 tctccgccac cgggttcagg gagatgtagc cgacgccgcc gtcgaacagc gtgccgcgcg
      781 gcaccgaacg gatgtggatc gtggcccggg tcaggtcgta ggggatcgga tctgcgaatc
      841 cggcccggcg gacctccagc gcgatcttgc tcccgggctc gccgcgcaac gccttgaccg
      901 cctgatcgtt cttccaaccc tcggtggact tgccgtccac ctcgatgatc tggtcaccgg
      961 tctggattcc ggcccgctcg gccggagtgt cggggagggg cgcgacgacc gtgatccagc
     1021 cgtcgcgcac gtcgatctgg atgccaagac cggcgtagtt gcccgaggtc tgctcggtga
     1081 gggacttgta gtcgtcgccg gtgagcagta ccgagtaggg atccttgagc tcctcgagca
     1141 tcccgttggt ggccttgtcg tacaggtcgg tctcgccgat cgagtccacg tagtagttgt
     1201 gcacgtggga caggacgtcg tcgaacagtc gcgcctgctg gtagacgttg cccccggccg
     1261 cgacgccccg ctgcaagagc cagccgccgc tcaggaagga gatcaccgct accagcccga
     1321 tcacgcccca gcgctgcttc atacgcacgt cctccgagcc ctcggtgcgg ctacacgccg
     1381 ccctttcgaa aggtttccgg cgccgttctg accagctcgc cccaggcggc atcgagcacg
     1441 gacgcgggcg gcgccgtccc atccaaatgt cgcacccccg cgccggtcgc cgctagatag
     1501 gcggctgcca cccgctcgtg aaaccggggg tcctccagct ccagcctgtc gcggcccttg
     1561 ccgccggcct tctgccgggc ccgaccaagc tccgggggga tgtcgagtac cagcgtcagg
     1621 tgtggccgga gccctccagt cgccacctgg ttcacatagg ccactctgtc cggatcaagc
     1681 cctctgccag ccgcctgata ggcatgggtg gacaggtcgt accggtcgct gaccaccacc
     1741 cggcccgccg ccagcgccgg ccggatgaca ttctgcacta agtgggcccg cgctgcggta
     1801 acgtacagaa gctccgtatt gggaccgagc gggtggtccg ggtcgaggaa agcggcccgg
     1861 atcgcctccg ccgccggggt gctcccgggc tcccgcacgc tgaccggatc aatccccgca
     1921 gatcgcagcc gggccacgag cccctccacc agcgtggact tgccggcccc ctccgctccc
     1981 tcgacgacca ggaagaaccc gctcacgaga gggtgatgat gctgctcgtc gccccttttt
     2041 ccattccctc gccgatctgc tgattgacct tggtcatcag cttctcaaaa ttggcgcggg
     2101 cgacgacgta ggcctggccg gtaccgctcg cctcgaggtc ccggaccgcc gtttcgtagg
     2161 cctccgcggt cggctggtcg ggcatctgcc cctgcgccac cagctggtcc acctgccgcg
     2221 ccaggcgttg gatctggtcg agcttggcct gcgtctcctt gtcttcgcgg agattcgttt
     2281 ccgcccgtct gagcgcctgg tactccggcg tctgcccgat gagccggccc agctcctgcg
     2341 ccttgtccca gatcacggtc tcttgctcct ccgcgcgaac aggtagcgct cgcgcccgaa
     2401 aaggtccacg ccgacttcaa tgccagtcca gccgagcctt cgcgcgagcg cggccaccgc
     2461 ctgcgcccgg ctcgcgtcca cctcgagcgc gatcca
//
LOCUS       DATIFF010000950         2891 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1810148, whole genome shotgun sequence.
ACCESSION   DATIFF010000950 DATIFF010000000
VERSION     DATIFF010000950.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2891)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2891)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2891
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1810148"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1599)
                     /locus_tag="VLD58_13925"
     CDS             complement(<1..1599)
                     /locus_tag="VLD58_13925"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HSB55454.1"
                     /translation="MKVGIIGAGPAGLYLAILLKRDDPSHQVTVYERNRLQDTFGFGV
                     VFSDQTLENVGEADHETNQAMEAAAATWDAIEIHFGGTVIRTTGHRFSGLGRQTMLEL
                     LAARASSLGVELQFEREIRNPAECGPADLIVAADGVGSLVREQLAEQFRPQIDWRQNR
                     FVWLGTTRPFPAFTFYFKASPAGLWRTHAYQYAPGRSTFIVEATESTWQASGLGANDE
                     PATVAYLSELFREELEGHPLIANRSIWRRFPTVRNASWRAGNVVLLGDAAHTAHFSVG
                     SGTKLAMEDAIALAGALKERRIVPEALAAYEASRRPAVESLQRAAQASLEWFESAERY
                     QALDPLQFAFNLLTRSLRITHENLRLRDPGLVERVDRWYAEQATVQSGQAIPADRVPP
                     PLFTPYRIRELVLPNRVVVSSMCQYRAEDGLPNDWHMVHLGSRAIGGAGLVMTEMTDV
                     SREGRISPGCCGMYRPEHVDGWRRIVEFVHRESEAKIGVQLGHAGRKGSTRRLWEGDN
                     EPLPEGNWPLIAPSAIPYFPHSQVP"
     gene            complement(1596..>2891)
                     /locus_tag="VLD58_13930"
     CDS             complement(1596..>2891)
                     /locus_tag="VLD58_13930"
                     /inference="COORDINATES: protein motif:HMM:NF012927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55455.1"
                     /translation="ATEDGLVTPEVLAWYERFAQGQPGALVVEATGIRDIPSGPLLRI
                     GHDRFVPGLARLVETVRKASGGRTRLFIQILDFLRIRRRPEPGRYFREFLSLTEAHRA
                     RFTGSDEAIREALAALPESEWPTVLSPRELESLQHGERERVTDTALPHLRELPRVLPD
                     LFAGAARRAEAAGFDGVELHYAHAYTMASFLSGLNDRDDGYGGNRENRVRLPLEVYYA
                     VRQAVGRGFVVGCRFLTDECIAGGSGVPDASWFGTEFARAGMDFLSLSRGGKFEDARQ
                     PRIGWARYPYTGRSGYECMPTVRSDQRGPFGRNREAAQAVRNAVRRSGFSTPVVMTGG
                     ISTFEQAEELIGAGVADVIGSARQSLADPDWFLKLRLGLGAEIRRCVFTNYCEGLDQV
                     HKQVTCKLWDHVDLERPGTELSEDGRRRLVAPAWTPGAR"
BASE COUNT          444 a          992 c          995 g          460 t
ORIGIN      
        1 gggcacctgg ctgtgcggaa agtaggggat ggcggacggg gcgatcagcg gccagttccc
       61 ctcggggagc ggctcgttgt ccccctccca gagccgccgg gtggagccct tccggccggc
      121 atggccgagc tggaccccga tcttcgcctc gctctcgcgg tgcacgaact ccacgatccg
      181 gcgccatccg tccacgtgct ccgggcgata catcccgcag cagccgggtg agatccgccc
      241 ctcccggctg acgtcggtca tctcggtcat caccagcccc gcgcccccga tcgcccggct
      301 gccgaggtgg accatgtgcc agtcgttggg aagaccgtcc tccgcgcggt actgacacat
      361 ggaggagacc accacccggt tcggcagcac cagctcgcgg atccggtagg gtgtgaacag
      421 cggtggcggc acccggtcgg ctggaatcgc ctgcccgctc tgcacggtgg cctgctccgc
      481 gtaccaccgg tctacccgct ccaccagtcc gggatcgcgg agccggaggt tctcgtgggt
      541 gatgcggaga ctgcgagtga gaaggttgaa ggcgaactgc agcggatcca gcgcttggta
      601 gcgctccgcc gactcgaacc attcgaggct ggcctgggcc gcgcgctgca gactctccac
      661 cgctggcctg cggctggcct cgtatgcagc gagggcctcc ggtacgattc gccgttcctt
      721 gagcgctccg gccagggcga tcgcatcttc catcgccagc ttggtgccgg agcccaccga
      781 gaaatgggcg gtgtgggccg cgtcgcccag cagcaccaca ttgccggccc gccagctggc
      841 attgcgcacc gtggggaacc gccgccagat ggaccggttg gcgatcaggg gatggccttc
      901 gagctcctcc cggaacagct cgctcaggta ggcgacggtc gccggctcgt cgttggcgcc
      961 gagtccgctt gcctgccagg tcgattcggt tgcctcgacg atgaaagtcg agcggccggg
     1021 agcgtactgg taggcgtggg tgcgccagag cccggcgggc gaggccttga aatagaaggt
     1081 gaatgcgggg aaagggcggg tagtgccgag ccagacgaag cggttctggc gccaatcgat
     1141 ctgggggcgg aactgttccg ccagttgctc ccggacgagg ctgccgacgc cgtcggccgc
     1201 aacgatgaga tcggccgggc cgcattcggc cgggttccgg atttcgcgtt cgaattggag
     1261 ttcaacgcca agggaacttg cccgggcggc gagcagctcc agcatggtct ggcgcccgag
     1321 gccggagaag cggtgaccgg tggtgcggat gaccgtgccg ccaaagtgaa tctcgatggc
     1381 gtcccaggtg gccgcggccg cctccatcgc ctggttggtc tcgtggtcgg cctcgcccac
     1441 gttctccagc gtctgatcgg agaagaccac cccgaaaccg aaggtgtcct gcaaccggtt
     1501 ccgctcgtac accgtcacct ggtggctcgg atcgtcccgc ttgagcagga ttgcgaggta
     1561 caacccggcc ggtcccgccc cgatgatgcc gactttcacc gggctcccgg ggtccaggca
     1621 ggggccacca gccggcgacg tccatcctcc gagagctcgg tcccggggcg ctccaggtcg
     1681 acatggtccc agagcttgca ggtcacctgc ttgtgcacct ggtcgagtcc ttcgcagtag
     1741 ttggtaaaga cgcagcgccg gatctcggcg cccagcccga gacggagctt gagaaaccag
     1801 tcggggtcgg caaggctctg acgtgcggag cctatcacat cggctacgcc ggcgccgatc
     1861 aactcttcgg cttgctcgaa ggtcgagatg ccgccggtca tcaccacagg ggtactgaac
     1921 cccgaccggc gaacggcgtt gcgcacggcc tgggccgcct cacggttccg cccgaagggc
     1981 ccccgttggt ccgagcggac cgtcggcatg cattcgtagc cactccgccc ggtgtacgga
     2041 tagcgggccc agccgatcct gggttgcctg gcgtcctcga acttgcctcc ccgggagagc
     2101 gagaggaagt ccatgcccgc tcgggcgaat tcagtgccga accagctcgc gtccggcact
     2161 ccgcttccgc cggcgatgca ctcgtcggtc aggaaccggc acccgaccac gaacccgcgg
     2221 ccgacagcct gccggaccgc gtagtacacc tcgagcggga gccggacccg gttctctcga
     2281 ttgccgccat agccatcgtc gcggtcgttc aaccctgaca ggaacgacgc catggtgtag
     2341 gcgtgggcgt agtgcagctc cacgccgtcg aacccggcgg cctcggcccg ccgcgccgcg
     2401 ccggcgaaga ggtccggcaa tactcgggga agttcgcgga ggtggggcag ggcggtgtcc
     2461 gtgacccgtt cccgttcgcc gtgttgcagg ctctccagct cccgcggcga gagcaccgtg
     2521 ggccactccg actctggcag agcggccagc gcctcccgaa tggcttcgtc gctgccggtg
     2581 aagcgagccc ggtgcgcctc cgtgagactc agaaactcac ggaagtatcg ccccggctcg
     2641 ggccgccggc ggatccggag gaaatccagg atctggatga agagccgggt ccggccgccg
     2701 ctcgccttcc gcaccgtttc caccaggcgg gccaggccgg ggacaaagcg atcatggccg
     2761 atgcggagga gcggcccgct cgggatgtcg cggatgccgg tcgcttcgac caccagcgct
     2821 ccgggctgtc cctgtgcgaa gcgctcgtac caggccagga cttcgggggt gacgagccca
     2881 tcttccgtcg c
//
LOCUS       DATIFF010000951         1117 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_118426, whole genome shotgun sequence.
ACCESSION   DATIFF010000951 DATIFF010000000
VERSION     DATIFF010000951.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118426"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1051)
                     /locus_tag="VLD58_13935"
     CDS             complement(<1..1051)
                     /locus_tag="VLD58_13935"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase/oxidase"
                     /protein_id="HSB55456.1"
                     /translation="MAQLAAHPADLLVIGGGITGAGIARDAAMRGLRTILVDQHDLGF
                     GTSSRSSRLIHGGLRYLEEGDLKLVFEALRERKVLLTTAPHLVRPLPFTFPVHQGDRV
                     PLWKLWAGIWLYDLLAAFRNVRWHRLLGKRSLLRQEPMLRERGLVGGVQYYDAQCDDA
                     RLVLATVRSAMQHGALVANYATVEDLIRTDGQIRGARVRDMLDDSTGVVHAQVVVNAT
                     GPWCDRVRRLEDPAATPLLRPTKGAHVMVRRERLGNASAITLTSPIDGRVMFVLPWGD
                     FSYIGTTDTDTTESPDEVRASPADVIYLLRSANAAFPNARLTEEDVLSTWAGLRPLIA
                     PEAFVGASQVPREHLI"
BASE COUNT          185 a          370 c          399 g          163 t
ORIGIN      
        1 ggatcaggtg ttcgcgggga acctgcgagg cgccgacaaa ggcctcgggg gcgatcagcg
       61 gacggagtcc cgcccaggtc gacagcacgt cctcctcggt gagtcgggcg ttgggaaagg
      121 cggcgttggc ggagcggagc aggtagatga cgtcggccgg agaggcgcgg acctcatcgg
      181 ggctctcggt cgtgtcggta tcagtggtcc cgatatagga aaaatcgccc cagggaagca
      241 cgaacatcac ccgcccgtcg atcggggagg tgagggtgat ggcggaggcg tttcccagcc
      301 gctcccgccg caccatcaca tgcgcgccct tggtcggccg gaggagcggg gtggccgcgg
      361 gatcctcgag ccgacggacc cggtcgcacc agggaccggt ggcgttgacc accacctgag
      421 catgcaccac gccggtgctg tcgtcgagca tgtcacggac ccgggcgccc cgaatctggc
      481 cgtcggtgcg gatcaggtct tcgaccgtgg catagttggc caccagtgcg ccatgctgca
      541 tggcggagcg tacggtggcg agcaccagcc gggcatcatc gcactgggcg tcatagtact
      601 ggaccccgcc gaccaggccg cgttcccgga gcatcggctc ctgccggagc aggctccgct
      661 tgccgagcaa ccgatgccac cgcacattgc ggaaggcggc cagcaggtcg tagagccaga
      721 ttccggccca gagtttccag agcggcacgc ggtcgccctg gtggaccgga aaggtgaacg
      781 gcaacgggcg caccaggtgc ggggccgtcg tcagcagtac cttgcgttcg cggagggctt
      841 caaacaccag cttgaggtcg ccctcctcga ggtagcgcag gccgccatgg atcaggcggc
      901 tggaccgtga gctggtgccg aatcccaggt cgtgttgatc aaccaggatc gtccggaggc
      961 cgcgcatcgc ggcgtcccgg gcaatcccgg cgcccgtgat cccaccgcca atgaccagca
     1021 ggtcggcggg atgcgccgcg agctgtgcca ccgaggaccg atgtccgatc tcacgcgcgg
     1081 gtcgcccccg cccgtcctct atctcccgcg tccgagc
//
LOCUS       DATIFF010000952         2991 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2118633, whole genome shotgun sequence.
ACCESSION   DATIFF010000952 DATIFF010000000
VERSION     DATIFF010000952.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2991
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2118633"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VLD58_13940"
     CDS             <1..184
                     /locus_tag="VLD58_13940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55457.1"
                     /translation="SLEEVSQLLWAAQGITDEHGYRTAPSAGALYPLEIYLLVGAVDG
                     LETGTYKYLPSGHQDS"
     gene            complement(191..2527)
                     /locus_tag="VLD58_13945"
     CDS             complement(191..2527)
                     /locus_tag="VLD58_13945"
                     /inference="COORDINATES: protein motif:HMM:NF044877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55458.1"
                     /translation="MMAVMTAQPPLPLAPGGARPVSAAAAIIEDDDGGRVFVHGNLAY
                     AWDAGDTAARRFAAVSLVRIKAATQLQVGAAFAVKPASVRRWEARFADAGVAGLLAER
                     KGPKRKSKLIAATVAAIARLRDGGASYRAIAAATGVSQGSVRAALLLADADGDTEQPC
                     APAGSEDFLQSEPGSEPEPQPEPGSEPEVEMECPAAVSDEPPAPGRAPVLADPVDRAG
                     ERALAAFGLIPYAPPIFTGCARAPLAGLLLGLPALAGTGLLATAHDVYGELPNGFYSL
                     DTMLCESVFRALLGEARAEGATRIDPPALGRVLGLDRAPEVKTIRRKIGLLAAVGKAG
                     EWIAAMAARQVAARPEQAAVCYVDGHVRAYQGTRKIAKTHVPRLKFPAPATVETWVCD
                     AAGDPLLVVLAEPAASLAGELRRLIPQLRALVGDERRVLVGFDRGGWSPALFADLDAA
                     GFDTLTWRKGKIADIDETMFVECCHIDEHGRTHTWRLADTEVELDIAEGPRQGQTFGM
                     RQISLLDTAGTRQIHILTTRSDLTPGEIGYRMGSRWRQENHYRYARIHFDLDSHDTYR
                     ATDDDPTRMVPNPAKKPAYAQVEKARRALHSAETASDAALLAAHSPQPGTSVLLTNAM
                     IDTINADVHAAEQALAVALAAHQAIPARLPLSQVNPGQQVLDTETKLIHHAIRIAAYN
                     TMRSLARTILTATGYTRADDEAHTLIRTALAGSGDIIPDTATNTLHVRLDPLSAPRHT
                     AAIAELCHALNDTDTVYPGTDLTLRYSIKSHRRPHTNY"
     gene            complement(2735..>2991)
                     /locus_tag="VLD58_13950"
     CDS             complement(2735..>2991)
                     /locus_tag="VLD58_13950"
                     /inference="COORDINATES: protein motif:HMM:NF017774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HSB55459.1"
                     /translation="GDEITVVFERPPSPPIQSSSVMVVHAPKAAANSADDEIVRLVRA
                     DTRPQEIRVVTSDNTLINRVNAAGASVYPAERFRNLIDPP"
BASE COUNT          451 a          978 c         1071 g          491 t
ORIGIN      
        1 gtcgctggaa gaagtctccc aattgttgtg ggcagcccag ggcatcaccg acgaacacgg
       61 ttacagaacg gctccttcag ccggagcgct ttatccgctg gaaatttacc tgctggtcgg
      121 cgcggtggat ggcctcgaaa ctggcaccta taaatacctg ccatccggac accaggactc
      181 ctgatatagc tcagtaattg gtgtgcggtc gtcggtggga tttgatgctg tagcgcaggg
      241 tcaggtcggt gccggggtag acggtgtcgg tgtcgttgag ggcgtggcag agttcggcga
      301 tggcggcggt gtggcggggc gcggacagtg ggtcgagccg gacgtgcagg gtgttggtgg
      361 cggtgtcggg gatgatgtcg ccggagccgg ccagcgcggt gcggatcaag gtgtgggctt
      421 cgtcgtcggc gcgggtgtag ccggtggcgg tgaggatcgt gcgggccagc gatcgcatgg
      481 tgttgtaggc ggcgatgcgg atggcgtggt ggatcaactt ggtttcggtg tcgaggacct
      541 gctggccggg attgacctgc gacaacggca gccgggcggg gatcgcctga tgggcggcca
      601 gcgccacggc gagtgcctgc tcggcggcgt gcacgtcggc gttgatggtg tcgatcatcg
      661 cgttggtcag cagcaccgag gttcccggtt gcggcgagtg ggcggccagc agcgcggcgt
      721 cgctagcggt ttcggcagaa tgcagtgccc ggcgggcctt ttcgacctgg gcgtaggcgg
      781 gctttttggc cgggttgggc accatccggg tcgggtcgtc gtcggtggcg cggtaggtgt
      841 catgggagtc gaggtcgaaa tggatgcgcg cgtagcggta gtggttctct tggcgccagc
      901 gcgagcccat ccggtagccg atctcacccg gcgtcaggtc ggagcgggtg gtcaggatgt
      961 ggatctggcg ggtaccggcg gtgtcgagca ggctgatctg gcgcatgccg aacgtctggc
     1021 cctggcgtgg cccctcggcg atgtccaact cgacctcggt gtcggccagg cgccaggtat
     1081 gagttctgcc gtgctcgtcg atatggcagc actcgacgaa catggtctcg tcgatgtcgg
     1141 cgatcttgcc cttgcgccag gttagggtgt cgaacccggc cgcgtccagg tcggcgaaca
     1201 gcgccgggga ccagccgccg cggtcgaacc cgaccagcac ccggcgctcg tcgccgacca
     1261 gggcgcgcag ttgggggatc aaccggcgca gctcgccggc cagcgaggcg gccggttcgg
     1321 ccagcaccac cagcagcgga tccccggccg catcgcacac ccaggtctcc accgtggccg
     1381 gggccgggaa tttcagcctg ggcacatggg ttttggcgat cttgcgggtg ccctgatagg
     1441 cgcgcacatg cccgtcgacg tagcacaccg cggcctgctc ggggcgcgcg gccacctgcc
     1501 gggccgccat cgcggcgatc cactcgccgg ccttgcccac cgcggccagc agcccgatct
     1561 tgcggcggat cgtcttgacc tcgggggcgc ggtccaaccc cagcacccgg cccagggcgg
     1621 gcgggtcgat ccgggtggcg ccctccgcgc gggcctcacc gagcagggcg cggaacacac
     1681 tctcgcacaa catggtatcc agcgagtaga acccattggg caactcgccg tacacatcgt
     1741 gagcggtggc cagcagcccg gtgcccgcca acgcgggcaa ccccagcaac agtcccgcca
     1801 gcggggctcg ggcgcacccg gtaaatatcg gcggcgcgta cgggatcagc ccgaacgccg
     1861 ccaacgcccg ctcaccggcg cggtcgaccg gatcggccaa caccggcgcc ctcccgggcg
     1921 caggcggctc atcggaaacc gctgcgggac actccatctc aacctcgggc tcggacccgg
     1981 gctccggctg cggttctggc tctgacccgg gctccgactg gagaaaatcc tccgagcctg
     2041 ctggggcgca cggctgctcg gtatcgccgt cggcgtcggc cagcagcaac gcggcgcgga
     2101 cgctgccctg cgacaccccg gttgccgcgg cgatggcgcg gtaggacgcc ccaccatcgc
     2161 gcagccgagc gatggccgcg accgtggcgg cgatcagttt cgacttgcgt ttgggccctt
     2221 tgcgttcggc gagcaacccg gccaccccgg catcggcgaa ccgcgcctcc cagcgccgca
     2281 cgctggccgg tttcaccgcg aacgccgcgc ccacctgcag ctgggtggcg gccttgatcc
     2341 gcaccagcga caccgccgcg aaccggcgcg ccgcggtgtc gccggcgtcc caggcatagg
     2401 ccaggttgcc gtgcacgaac acccgcccgc cgtcgtcgtc ctcgatgatc gccgcggccg
     2461 cgctgaccgg gcgcgcgccg cccggcgcca gcggcagggg cggctgcgcg gtcatcacgg
     2521 ccatcatcca ccaccccagg aatcgcgaga aatagctcta tctattatcg agcattgcga
     2581 cccgaactgc gcagcgacac accgggaaat ccgcagatca aagcacagaa ttaccgatcg
     2641 ggcaccgact ccgtgtcagg agtcctgggg ttaagagcgt ggcttgttgg tcggcgtcga
     2701 ggactgcatg gactcgctgt tccgcgtggg cttcctacgg cggatcgatg aggttgcgga
     2761 acctctccgc cgggtagacg gatgcacccg cggcattgac acgattgatc agcgtgttat
     2821 ccgaagtcac gacccggatc tcctgcggtc gggtatcggc ccgcaccagc cggacgatct
     2881 catcgtcggc cgagttcgcg gcagccttag gcgcatgcac gaccatgacc gacgatgatt
     2941 ggattggcgg cgatggcggc cgctcgaaca ccactgtgat ttcatcaccc t
//
LOCUS       DATIFF010000953         1253 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1196557, whole genome shotgun sequence.
ACCESSION   DATIFF010000953 DATIFF010000000
VERSION     DATIFF010000953.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1196557"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            85..>1253
                     /locus_tag="VLD58_13955"
     CDS             85..>1253
                     /locus_tag="VLD58_13955"
                     /inference="COORDINATES: protein motif:HMM:TIGR00924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HSB55460.1"
                     /translation="MATATAPSRPASDAPLDTRFFGHPRGLATLFFTEMWERFSYYGM
                     RALLILFMTAPVAAGELGFDTAKAGPIYALYVSSVYLLSLPGGWLADQVLGLRPAVFV
                     GGVIIMAGHICLALPSLTTFYLGLVLIAAGTGFLKPNVSVLVGKLYAPDDVRRDAGYS
                     LFYMGINTGAFVAPLITGWLAQGDGFKRILTSFGFAPESSWHWGFGAAAVGMFCGLVQ
                     YTLGGKYLAEDGRRPVRPSDPVAAARMDRQMRLVGFGLLAAVALAVVLVTTGVVPVDP
                     EAISRSFKWVLIGVTVGFFGWLLLIARWTPEERKRLVVVAVLFVAATVFWMAYEQAGS
                     TLNLFAERNTSNVLLGHGFPASWYQSLPPLFVITFAAVFAALWLRLGARNPSSTA"
BASE COUNT          154 a          436 c          429 g          234 t
ORIGIN      
        1 cattcgcggc cgggctcccg cgagctcggc ccgacctaac tccccattct ttttgccccc
       61 cgtccaccgg taggagagtc gatcttggca accgcgaccg ccccatcccg tcccgcatcc
      121 gacgccccgc tcgacacccg cttcttcggg catccgcgcg ggctcgccac gcttttcttc
      181 accgagatgt gggagcgctt cagctactac ggcatgcgcg cgctgctcat cctcttcatg
      241 accgcgccgg tggcggccgg agagctgggc ttcgataccg ccaaggcagg accgatctac
      301 gcgctctatg tcagctcggt ctacctgctc tccctccccg gcggctggct ggccgaccag
      361 gtgctggggc tccggccagc ggtgttcgtg ggcggcgtga tcatcatggc gggccacatc
      421 tgcctggcgc tcccctcgct gaccacgttc tacctcgggc tggtgctgat cgcggcgggc
      481 accgggttcc tcaagccgaa cgtcagcgtc ctggtgggca agctctacgc gcccgacgac
      541 gtccggcggg acgccggata ctcgctcttc tacatgggga tcaacaccgg ggccttcgtg
      601 gcgcccctga tcaccgggtg gctggcccag ggcgacgggt tcaagcggat cctgacgtcg
      661 ttcggattcg ccccggagag ctcgtggcac tggggcttcg gcgcggccgc ggtagggatg
      721 ttctgcgggc tggtgcagta caccctcggg ggcaagtacc tggctgaaga cggccgccgt
      781 ccggtccggc ccagcgaccc ggtggccgcg gcccggatgg accggcagat gcggctggtt
      841 ggcttcggcc tcctggccgc ggtggcgctc gccgtcgtgc tggtgacaac cggagtggtg
      901 ccggtcgacc ccgaggcgat ctcccgcagc ttcaaatggg tgctgatcgg cgtgaccgtc
      961 gggttcttcg gctggctgtt gctgatcgcc aggtggacac ccgaggagcg gaagcggctg
     1021 gtggtggtgg cggtgctgtt cgtggcggcg acggtgttct ggatggccta cgagcaggcc
     1081 ggctcgactc tcaacctctt cgccgagcgg aacaccagca acgtgctctt ggggcacggc
     1141 ttcccggcga gctggtacca gtcgctgccg ccgctgttcg tcatcacctt cgcggcggtg
     1201 ttcgcggcgc tctggctccg gttgggggcg cggaacccct ccagcaccgc caa
//
LOCUS       DATIFF010000954         1430 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_733959, whole genome shotgun sequence.
ACCESSION   DATIFF010000954 DATIFF010000000
VERSION     DATIFF010000954.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1430
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_733959"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(295..1026)
                     /gene="istB"
                     /locus_tag="VLD58_13960"
     CDS             complement(295..1026)
                     /gene="istB"
                     /locus_tag="VLD58_13960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_043766072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HSB55461.1"
                     /translation="MERPDLIAMMAELSLSGMRAAYDEVMRDGLKRQRSVPQILGDLL
                     AAEVAEKKARSIRYQLGAAKLPLTKTLAEFDFTANPVNQALVRDLHDGGFLTTQRNAV
                     CIGGPGTGKTHICIAITANCVRRGARARFFNVIDLVNRLEAETRAGQAGKLADQLTRV
                     DLVVLDELGYLPFSQSGGQLLFHLISKLYSRTSVLITSNLGFAEWPSVFGGDAKMTTA
                     LLDRLTHHCDILETGNESWRFKNRS"
     gene            complement(1136..1430)
                     /locus_tag="VLD58_13965"
                     /pseudo
     CDS             complement(1136..1430)
                     /locus_tag="VLD58_13965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608154.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS21 family transposase"
BASE COUNT          218 a          460 c          520 g          232 t
ORIGIN      
        1 cgccaaccgc tcaatagggc gggtcatccg tctcatccgg tgggagcatc ggcccgtggt
       61 ttgtaatcac ccctggccca tcgctcgacc ggttcggccg gctgtcaatc gacttcgaac
      121 ttccggccag catcggcgtc caatacccag ccactcttct ggttgcagag cccgttgtcc
      181 agggagtccg caggagggtc ccgcgcgcgc cgcggagtgc cctcatggct gacgcagcgg
      241 ggtgcgtggg agggagcccc cctgggcaac gagcgggagg gggctgggga agggtcagga
      301 gcggttcttg aaccgccagc tctcgttccc ggtctcgagg atgtcgcagt gatgggtgag
      361 ccggtcgagc aaggcggtgg tcatcttggc gtcgccgccg aacaccgacg gccattcggc
      421 gaagccgaga ttgctggtga tgagcaccga ggtacgggag tacagcttgc tgatcaggtg
      481 gaacagtagc tggccgccac tctgggagaa cggtaggtag ccgagttcgt cgagcaccac
      541 gagatcgacc cgggtgagct ggtcggcaag ctttccggcc tgcccagccc gggtttcagc
      601 ctccagccgg ttcaccaggt cgatgacgtt gaagaagcgg gcgcgggcac cgcggcgcac
      661 acagttggcc gtgatggcga tgcagatgtg tgtcttgcca gtgccggggc cgccgatgca
      721 cacggcgttg cgctgggtcg tcaggaagcc gccgtcgtgt aggtcgcgca ccagggcctg
      781 gttgacgggg ttggcggtga agtcgaactc ggccaaggtc ttggtcagcg gcagcttggc
      841 ggccccgagc tgatagcgga tggaacgcgc tttcttctcc gccacctccg ccgcgagcag
      901 gtcgccgagg atctgcggaa ccgagcgctg ccgcttcagc ccgtcgcgca tcacctcgtc
      961 gtaggcggcg cgcatgcccg acaggctcag ctccgccatc atcgcgatca gatcaggccg
     1021 ctccatggcc ggcctccggg gcggcgcgca ggcggtcgta acgggcgcag tcggcggccg
     1081 gctcgatcgt cagcgtcaag gcggccggca ccgccaccgg agctggccgc gtgacgtcgt
     1141 ggcggcgggc gagaatgttc aggatcacgt cgcggccaca ggggccgtcc gtcagcgcct
     1201 cgtggcacgc cgcctcgacc gcgtccaggc cgtcagtgag gatggcgcca aggatggcca
     1261 cgaactgccg gtcggcgtca ttggaacgcc ccagccgggc cctcaccttg gtcagggccg
     1321 gcggcagctc ccactcccgg aacggcgctc cgttgcgcag cgcccccggc ttgcgggcga
     1381 ggatcggcag gtagtggagc gggttgtaga tcgtgccatc gtggccgaag
//
LOCUS       DATIFF010000955         3470 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1349533, whole genome shotgun sequence.
ACCESSION   DATIFF010000955 DATIFF010000000
VERSION     DATIFF010000955.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3470
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1349533"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..447)
                     /locus_tag="VLD58_13970"
     CDS             complement(<1..447)
                     /locus_tag="VLD58_13970"
                     /inference="COORDINATES: protein motif:HMM:NF024827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiheme c-type cytochrome"
                     /protein_id="HSB55462.1"
                     /translation="MAAGLFALIAASACTDTVYRDRAPFNPPPDAASGFLGYYTAAEQ
                     QTTCGNCHVDHQADWAKHGHSEAWASLQASGHAAGYCYGCHGVSQNGNAVDTAAGINK
                     VNDKAYYDVQCENCHGPGETHVKTPDANTSPLARVNADTLGDPANPN"
     gene            complement(771..1424)
                     /locus_tag="VLD58_13975"
     CDS             complement(771..1424)
                     /locus_tag="VLD58_13975"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016471 - vacuolar proton-transporting
                     V-type ATPase complex [Evidence IEA];
                     GO_function: GO:0008553 - P-type proton-exporting
                     transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="V-type ATP synthase subunit D"
                     /protein_id="HSB55463.1"
                     /translation="MSTERLAPTRLNLIRAERRLERVEKGAALLRRKREALVTELFRL
                     ARPAAGARKLIEDGARRGYTRLLGALATRGRAGLRPLAWPERDLQVEIRAAQIWGVPV
                     ASITSRPPLVRTIAARTVAPPSAGPTVAAAAAEFERLTEMLLDAATREMLIRRLGEAL
                     ARASRQVHTLERRLTPALEHQMASVRRTLEEREREEHLRLKHLRRLHGVRSVEQSPR"
     gene            complement(1421..2803)
                     /locus_tag="VLD58_13980"
     CDS             complement(1421..2803)
                     /locus_tag="VLD58_13980"
                     /inference="COORDINATES: protein motif:HMM:NF003235.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="V-type ATP synthase subunit B"
                     /protein_id="HSB55464.1"
                     /translation="MTTLARTYLGAQSAGGPLIYLRATPRVAQGEWVSITSPGQPVRR
                     GQVIDAGESVTVVQVLEETIGLTPARAAITLTGDVATAVVGKELLGRTLNGMGAPLDG
                     LPAPVGEGVRPIWAAPLNPARRARPADFIETGISAIDGMNTLVRGQKLPVFSGPGLPA
                     LELASQIVEGARAPRGEPFAVVFVGIGITARERQSFTERFAQSGAAERSVLYFNEARD
                     PTIERLLAPRVALAEAEFLAFEAGLHVLVVIADMTPYCEALREIATAREEIPGRRGYP
                     GYMYTDLASIYERAGLITGRPGSVTQIPIVTMPDDDITHPIPDLTGYITEGQVVLSRE
                     LHRRGIFPPIDVLPSLSRLMNAGIGKGRTVPEHREWADQLYAVYTRGREARLMAAIVG
                     EAGLAESDRRSLGFATRFEEEFVRQGGQRRTLTETLAEGWRLLETLPREDLTRISDNT
                     WSARHGVPAT"
     gene            complement(2800..>3470)
                     /locus_tag="VLD58_13985"
     CDS             complement(2800..>3470)
                     /locus_tag="VLD58_13985"
                     /inference="COORDINATES: protein motif:HMM:NF012236.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55465.1"
                     /translation="LGKFYERAGRVRALGEPAREGVLTLISAVSPPGGDFSEPVTQAS
                     LRVAGALWALDPALAHQRQFPAVDWETSYSLHAGHTDPWFAEHAGKEWPALRRDTLEL
                     LQRERELREIAGLIGPEALQDKDRLLLEAARLVRETVLGQSAFDPNDALSPINKTYQL
                     ALLARQAYQGGLAALDRGAVFDHLNLAPLRRAIAAVRWAPVAELDSRIADATRAVQQI
                     GAGS"
BASE COUNT          497 a         1174 c         1208 g          591 t
ORIGIN      
        1 attcgggttc gccggatcgc ccagggtatc ggcattcacg cgggcgagtg gcgaggtgtt
       61 ggcgtccgga gtcttgacgt gggtttctcc ggggccatgg cagttctcgc actgcacgtc
      121 gtagtaggcc ttgtcgttga ccttgttgat gcccgcggcg gtatcgaccg cgttgccgtt
      181 ctggctgacg ccgtggcagc cgtagcagta cccggccgcg tgccccgacg cctggaggct
      241 ggcccaggcc tcggagtggc cgtgcttggc ccagtcggcc tggtggtcga cgtggcagtt
      301 gccgcaggtg gtctgttgct ccgcggccgt gtagtagccg aggaatccgc tggcggcatc
      361 aggtggagga ttgaacgggg cgcggtcgcg atagaccgtg tccgtacagg ctgaggcggc
      421 aatcagggcg aagagccctg ccgccaatcg aagatgggta cccaacgaag atctgcgcat
      481 ggtctgcccc gtggaagtac ggtagtgcac ctacagtatc gctcgcattt taatgcgcaa
      541 gactatttgg aatgagagtc ccttcaaatc tcctctgggc ctattgttag agcggcgaga
      601 tgaggtctct cccttggaca attttgtccg accttcatgc attcttccca attgcaggct
      661 gaattcgtgc tccttcgcga cccccggctg cccgctccgc gaccccggca accagtggct
      721 ccgtaggact acggggaccg attatcggtc tacatcgagc tgacgggccc tcacctcgga
      781 ctctgctcga ccgacctaac tccatgcagc cgccggagat gcttgagccg gagatgctcc
      841 tcccgctccc gctcctccag ggtccggcgc acgcttgcca tctggtgctc cagggccgga
      901 gtcagccggc gttccagcgt gtgaacctga cgggatgccc gggccagggc ctcgcccagc
      961 ctccggatca gcatttcacg ggttgccgcg tccagcagca tctcggtcag ccgctcgaac
     1021 tcggccgccg ccgccgccac ggtcggcccc gcgctggggg gcgccacggt ccgggcggct
     1081 atggtgcgga ccagcggcgg acggctggtg atgctggcga ccggcacacc ccagatctgg
     1141 gctgcccgga tttccacctg aagatcccgt tccggccatg ccagcggccg aagacccgcc
     1201 cggccccggg ttgccagggc gccgagcagc ctggtgtacc cgcggcgcgc cccgtcttcg
     1261 atcagcttgc gggctccggc ggccggtcgg gcgaggcgaa agagctcggt gaccagggcc
     1321 tcacgcttgc gccggaggag tgcggcgccc ttttccaccc gttccagtcg gcgttcggcg
     1381 cggatcagat tgagccgggt gggggcgagg cgttcggtgc tcatgtggcc ggaacgccgt
     1441 gacgcgcgga ccaggtgttg tccgatatcc gggtcaggtc ttcgcgcggg agcgtctcga
     1501 gcaaccgcca tccttcggcc agggtctcgg tgagggtccg ccgctgacct ccctgccgga
     1561 cgaactcctc ttcgaaccgg gtggcgaacc cgagcgagcg gcggtcggat tccgccaggc
     1621 ccgcttcacc cacgatcgcc gccatgagcc gggcttcgcg gccgcgggtg tacaccgcat
     1681 agagctggtc ggcccactcc cggtgttccg gcaccgtccg gcctttgccg atcccggcgt
     1741 tcatcaggcg tgacagcgaa gggagcacat cgatcggcgg gaagattccg cgccggtgga
     1801 gctcccgcga cagtacgacc tgtccctcgg tgatgtagcc ggtcaagtcg ggtatcggat
     1861 gggtgatatc atcgtccggc atggtcacga tggggatctg ggtgaccgag ccgggccgcc
     1921 cggtgatgag ccccgccctt tcgtagatgc tcgcgagatc ggtgtacatg tatcccggat
     1981 agccgcgccg gcccggaatc tcctcccgcg ccgtcgcgat ttcgcggagc gcctcgcagt
     2041 agggcgtcat atcggcgatc actaccaaca cgtgcagtcc cgcctcgaag gccaggaact
     2101 cggcctcggc cagggccacc ctgggcgcca gcagccgttc gatggtgggg tcgcgggctt
     2161 cgttgaagta gagcacgctc cgctcggccg ccccgctctg ggcaaagcgt tcggtgaacg
     2221 actgccgctc ccgggcggtg atgccgatgc ccacgaagac cacggcgaag ggttcgcccc
     2281 gcggggcccg ggcgccttcg acgatctggg aggcgagctc gagtgccggg agtccggggc
     2341 cggagaagac cgggagcttc tgtccccgga ccagcgtgtt catgccgtcg atggccgaga
     2401 tcccggtctc aatgaagtca gcggggcggg cccggcgggc ggggttgagt ggggcagccc
     2461 agatcgggcg cacgccttcg ccgacgggcg cgggcagccc atcgagcggc gcacccattc
     2521 cattgagcgt ccgtcccagc agctccttcc ccacgacggc ggtggcgacg tcgccggtca
     2581 gcgtgatggc ggcccgggct ggtgtgagtc cgatcgtttc ctccagcacc tgcaccaccg
     2641 tcaccgattc gcccgcatcg atgacctggc cgcgccggac gggctgaccc ggcgaggtga
     2701 tactcaccca ttcgccctgg gcgaccctgg gcgtggcccg gaggtagatg agggggccgc
     2761 cggcggactg ggcgccgaga taggtgcggg cgagtgtggt catgagcccg ctccgatctg
     2821 ctggactgcg cgggttgcgt cggcgatccg gctgtcgagt tccgctaccg gcgcccagcg
     2881 caccgccgca atcgcgcgcc ggagtggcgc cagattgagg tggtcgaaca ctgcgccccg
     2941 atcgagcgcg gccaggccgc cttgataggc ctggcgtgcg agcagcgcca actggtaggt
     3001 cttgttgatc ggggagagcg cgtcattcgg atcgaaggcg ctctggccca ggacggtctc
     3061 ccgcaccagg cgtgcggctt cgagcagcag ccggtccttg tcctggaggg cctccggtcc
     3121 gatgagcccg gcgatctcgc gcagctcccg ttcccgctgc agcagctcca gggtatcgcg
     3181 ccggagcgcc ggccactcct tgcccgcatg ctcggcgaac caggggtcgg tgtggccggc
     3241 atgcagggag tagctcgtct cccaatcgac cgcggggaac tggcgctggt gggccagcgc
     3301 cggatccaag gcccacagtg cgcccgccac tctgagcgag gcctgggtga cgggctcgga
     3361 gaagtcaccc cccggcggtg acaccgcgct gatcagggtg agcacccctt cccgcgccgg
     3421 ctcgcccagc gcacgcaccc ggcccgcccg ttcgtagaac ttgcccaacc
//
LOCUS       DATIFF010000956         1721 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_886448, whole genome shotgun sequence.
ACCESSION   DATIFF010000956 DATIFF010000000
VERSION     DATIFF010000956.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1721
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_886448"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            156..908
                     /gene="hisF"
                     /locus_tag="VLD58_13990"
     CDS             156..908
                     /gene="hisF"
                     /locus_tag="VLD58_13990"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR00735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HSB55466.1"
                     /translation="MLARRIIPCLDVADGRVVKGVHFQSLRDAGDPVEQAARYDREGA
                     DELIFLDISASHEDRETMLEMVAHVAETIFIPFTVGGGIRSVEDAGRALRAGADKVAV
                     NTAAVRDPSLVRRLADSFGSQCVVAAVDVRRNGTGWQVYITGGRDATTLDGIEWMATL
                     EELGAGEILLTSMDRDGTQKGYDLDLLRAASRRVRIPVIASGGAGKLADLADALEAGA
                     HGVLAASIFHYQGCSLPEARAFLKQRGFPVRP"
     gene            911..>1721
                     /locus_tag="VLD58_13995"
     CDS             911..>1721
                     /locus_tag="VLD58_13995"
                     /inference="COORDINATES: protein motif:HMM:NF016906.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NosD domain-containing protein"
                     /protein_id="HSB55467.1"
                     /translation="MRPLLVAVGAVLALPAWFLEGRQGGMAAGRQALAALPPGRFAAA
                     VRCIRVDKPNTQVSGEVKICPGRYRIPDPNERGVLVVTGSNTRIDLTGVTLESGGAQA
                     AEFSGIGILSLRGDSISIRGGRIKGYRFGVRLEGGRGHRVSGVDLSGSRSQALRSSAG
                     NFDPRDWLNIASPDTFEMYGAGLYLKRTSGVLVTGVIARGSQNGIGLFETRESMLADN
                     DVSGNTGWGIHLWKSSHNTIVRNQASRNVRCESDTYRRGCDSAALLLREQSD"
BASE COUNT          266 a          589 c          580 g          286 t
ORIGIN      
        1 gggagaaggg agaagggaga agggagaagg gagaagggct ccctgaagcg attcacccgg
       61 cgacgctgac gacaagctac tttcaaggca acttcttact tcttacttct tacttctcac
      121 ttcttacttc tcccttctcc cttctccctc ttcgaatgct cgcccgccgc atcatcccct
      181 gcctcgacgt cgccgatggg cgcgtggtca agggcgtcca cttccagtcg ctccgcgatg
      241 cgggtgaccc ggtggagcag gccgcgcgct acgaccgcga gggtgcggac gagctgatct
      301 tcctcgacat ctccgccagc cacgaggacc gggagaccat gctcgagatg gtggctcacg
      361 tggcggagac gatcttcatc ccgttcaccg tgggcggcgg aatccggtcg gtagaggatg
      421 cgggccgcgc cctccgcgcc ggggccgaca aggtggcggt caacaccgcc gcggtgcgcg
      481 atccgtcgct ggtgcgccgc ctggccgaca gcttcggcag ccagtgcgtg gtggccgcgg
      541 tcgacgtgcg gcgcaacggg accgggtggc aggtctacat caccggcggc cgggatgcca
      601 ccactctcga cgggatcgag tggatggcca cgctcgaaga gctgggagct ggagagatcc
      661 tgctcacctc gatggaccgg gatggcactc agaagggcta cgacctcgac ctgctccggg
      721 ccgcctcgcg gcgggtgcgg attccggtca ttgcctccgg cggcgcgggc aagctcgccg
      781 acctggccga tgcgctcgag gccggcgccc acggcgtcct ggcggcctcg atcttccatt
      841 accagggctg ttccctgccc gaagcgcgtg ccttcctcaa gcagcgcggg ttcccggtgc
      901 ggccatgacg atgcgcccgc tgctggttgc cgttggagca gttctcgcct tgccggcctg
      961 gttccttgag gggcggcaag gcggcatggc ggcagggcgg caggcactgg ctgctttgcc
     1021 gcctggccgc tttgccgctg ccgtcaggtg catccgcgtc gacaagccca acacccaggt
     1081 gagcggcgag gtgaagatct gccccggccg ttaccgcatc cccgatccca acgagcgcgg
     1141 cgtgctggtc gtgaccggga gcaacacccg catcgacctc accggcgtca ctctggaaag
     1201 cggcggcgcg caggccgcgg agttctccgg catcggcatt ctctcgctcc ggggcgacag
     1261 tatctcgatc cggggcgggc gtatcaaggg ctatcgtttc ggggtccggc tggagggagg
     1321 gcggggtcac cgcgtttcgg gggtcgatct ctcgggctca cgcagtcagg cgctccgctc
     1381 gagcgccggc aatttcgatc cccgcgactg gctcaacatc gcgagccccg acaccttcga
     1441 gatgtacggc gccggcctct atctcaagcg caccagcggc gtgctggtca ccggtgtcat
     1501 cgcccgcggc agccagaacg gcatcgggct cttcgagacc cgcgagagca tgctggccga
     1561 caacgacgtc tccggcaaca ccggctgggg catccacctg tggaagtcgt cccacaacac
     1621 catcgtccgc aatcaggcaa gccggaacgt ccgctgcgag agcgacacct atcgccgcgg
     1681 ctgcgacagc gccgccctgc tcctgcggga gcagagcgac t
//
LOCUS       DATIFF010000957         1960 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2272823, whole genome shotgun sequence.
ACCESSION   DATIFF010000957 DATIFF010000000
VERSION     DATIFF010000957.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2272823"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..241
                     /locus_tag="VLD58_14000"
     CDS             <1..241
                     /locus_tag="VLD58_14000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55468.1"
                     /translation="LFFRCLLSLAGRPAPADPRAVVENTGALVGFDPAPLLRVLACRA
                     APATTLATRDFEAYLDAVDRTARFTDQLQLGDQHP"
     gene            238..804
                     /locus_tag="VLD58_14005"
     CDS             238..804
                     /locus_tag="VLD58_14005"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HSB55469.1"
                     /translation="MTRTRLSASALLGAALLLTGCGYNTMQSLDEQINQAQGQIQTQL
                     QRRADLVPNLVNTVKGITKQEDTVFISIANARARLSGAVQARDVEGMAAANDQLSAGL
                     GRLLAISENYPELRSSENFKQLQDQLEGTENRIAVARTDYNTAVGQFNAYVRRFPYNL
                     TAKVFGLDKPRPYFQAQAGTKEPPKVQF"
     gene            complement(829..1752)
                     /locus_tag="VLD58_14010"
     CDS             complement(829..1752)
                     /locus_tag="VLD58_14010"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HSB55470.1"
                     /translation="MSKRRWTILLVPQGSGTSRAVELSWGAVKLAGAVAVVLAVAAVL
                     LGSATMARRVDLSRTAHLEDENARLAQELGELHARVTTLADTLSRISKRDGKIRLLAN
                     LEPIDPQVQAAGIGGPAAPASPGGLATPLLRKAADVKVDVNALIRRANLLASSFSAAE
                     DSLAAHTSRLAATPSIIPTQGWLSSAFSAMREHPILHVARPHEGIDVSAPMGTPIEAP
                     AAGVVRSTGWEAGYGNTIEIDHGFGIVTRFAHASRILVRQGQHVQRGERIALVGNTGL
                     TTGPHLHYEVHVNGRPVDPLRYVMPDGVVTD"
BASE COUNT          326 a          682 c          657 g          295 t
ORIGIN      
        1 gctcttcttt cgctgcctgc tctcgctcgc gggccggccc gcgccggccg acccccgagc
       61 ggtcgttgag aataccggag cgctcgttgg gttcgacccg gcgccgctgc tccgggtgct
      121 cgcgtgccgg gcggcgccgg ccacgaccct cgcaacgcgc gatttcgagg cctacctcga
      181 cgccgtcgac cgcacggctc gcttcaccga ccaactccag ctcggagacc agcatccatg
      241 acccggaccc ggctgtcggc ttcggcgctg ctcggcgccg cgctgcttct cacgggatgc
      301 ggctataaca cgatgcaatc cctggacgag cagatcaacc aggcccaggg acagatccag
      361 acccagcttc aacggcgggc cgatctcgtc cccaacctgg tgaacacggt caaggggatc
      421 accaagcagg aagacaccgt gttcatctcg atcgccaatg cgcgtgcgcg gctctcgggt
      481 gcggtacagg cgcgggatgt ggaggggatg gcagcggcga acgaccagct aagcgccggg
      541 ctcggccggc tgctggcgat ctccgagaac tacccggagc ttcgctccag cgaaaacttc
      601 aagcagctcc aggaccagtt ggaagggacg gaaaaccgga tcgcggtggc gcggaccgac
      661 tacaacacgg cggtggggca gttcaacgcc tacgtgcgcc gcttccccta caacctcacg
      721 gccaaggtgt tcggcctgga caagccccgg ccgtacttcc aggcgcaggc gggtacgaag
      781 gagcccccga aggtgcaatt ctaggccgga ggggccgccg gcccgccgtc agtcggtgac
      841 gacgccgtcc ggcattacgt agcgcagggg gtccaccggt ctgccgttga cgtgcacctc
      901 gtagtggagg tgcggaccgg tggtgagccc cgtgttcccc accagggcga tgcgctcgcc
      961 ccgctggacg tgctggccct ggcgcaccag gatccgcgag gcatgggcga accgggtgac
     1021 gatgccgaac ccgtggtcga tctcgatggt gttcccgtag cccgcctccc accccgtgga
     1081 ccgcacgacc cctgccgccg gtgcttcgat cggcgtgccc atcggagccg acacgtcgat
     1141 gccctcgtgc ggacgggcga cgtgcaggat cggatgctcc cgcatcgccg agaaggcgct
     1201 ggagagccag ccctgagtcg ggatgatgga gggagtggcc gccaaacggc tggtgtgcgc
     1261 ggcgaggctg tcctccgccg cactgaacga cgacgccagc agattggctc gccggatcaa
     1321 cgcgttcacg tccaccttca cgtcggccgc cttccgcagc agcggcgtcg cgagaccccc
     1381 cggggatgcc ggcgcggccg gcccgccgat gccggccgcc tgcacttgcg ggtcgatcgg
     1441 ctcgaggttg gcgagcagcc ggatttttcc gtcgcgcttg gagatccggg agagggtgtc
     1501 cgcgagggtc gtgacccgcg cgtgcagctc gcccagctcc tgcgccaagc gggcgttctc
     1561 gtcctccaag tgtgccgtcc tcgacaggtc cacgcggcgg gccatcgtgg cagaaccgag
     1621 gagtaccgca gccacggcaa gcaccaccgc caccgcgccg gcgagcttca ccgctcccca
     1681 tgacagctcg accgcccgtg aggtccccga accctggggc acgagcagga tggtccagcg
     1741 acgcttagac atcacccgac gatccggctt tcaggaacag tgacactcgc gactcctgac
     1801 tggctggctc gaaaggcggc tcgggccgcc tctgggattt cagacttggg cgcccgggaa
     1861 agtaggctaa agtcgtgccc ggcgaaaggc ttgtcaacct acggcggcga tcggctaacc
     1921 atttgacacg caagcggttt gacaccaagg agcctaagtg
//
LOCUS       DATIFF010000958         1100 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2119475, whole genome shotgun sequence.
ACCESSION   DATIFF010000958 DATIFF010000000
VERSION     DATIFF010000958.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2119475"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..499
                     /locus_tag="VLD58_14015"
     CDS             <1..499
                     /locus_tag="VLD58_14015"
                     /inference="COORDINATES: protein motif:HMM:NF025806.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cell division FtsA domain-containing protein"
                     /protein_id="HSB55471.1"
                     /translation="QHDAERLKERHGAGFEPLVPESDMIELPSTPGQGPRTAQRRVLA
                     HIMHMRLQEVLEYALDEVTRAGYHQRLPAGVVLTGGGAQTPGIVELAREVFAMPARIG
                     VPGQRLRGLADSVESPRMAVPAGLVLYGARQVAMSGGFGTGTRRSPAVEKVLAPVKRW
                     LQDFF"
     gene            521..>1100
                     /locus_tag="VLD58_14020"
     CDS             521..>1100
                     /locus_tag="VLD58_14020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HSB55472.1"
                     /translation="MIFELEESGVQTARMKVVGVGGGGGNAVNRMIEDQLGGVEFISV
                     NTDAQALAMSKSDVKIQIGRKLTRGLGAGARPEIGRQAIEENRDEVAAAVQGADMVFV
                     TCGMGGGTGTGAAPVVAQMARESGALTVGIVTKPFLFEGRRRMKQAEGGINELRKNVD
                     TMIVVPNERLLAVVGKGIPFQDSLKKTDEVLLQ"
BASE COUNT          187 a          337 c          432 g          144 t
ORIGIN      
        1 ccagcatgac gcggagcggc tcaaggagcg gcatggcgcg ggcttcgagc cgctggtgcc
       61 ggagagcgac atgatcgagc tgcccagcac gccgggccag ggcccgcgca ccgcgcaacg
      121 ccgggtgctg gcgcacatca tgcacatgcg gctccaggaa gtcctggagt acgcgctcga
      181 cgaagtgacg cgcgcaggct atcatcagcg cttacccgcg ggagtcgtcc tcacgggtgg
      241 cggggcgcag acgccgggaa tcgtggagct ggcccgggag gtcttcgcca tgccggcacg
      301 catcggggtg ccgggacagc ggctgcgcgg tctggcggac agcgtcgaat caccgcgaat
      361 ggcggtaccg gccggactgg tgctctacgg ggccaggcag gtcgcgatga gcggcggctt
      421 cggaacggga acccgcaggt cgccggcagt ggagaaggtg ctcgctcccg tgaagcggtg
      481 gctccaggac ttcttctgag tcggcccggg ggaacgaacg atgatctttg agctggaaga
      541 gagcggcgtc cagacggcgc ggatgaaggt ggtcggagtc gggggcggcg gcggcaacgc
      601 cgtcaaccgg atgatcgagg accagctcgg cggggtcgag ttcatctcgg tcaacaccga
      661 cgcccaggcc ctcgcgatgt cgaaatccga cgtcaagatc cagatcggcc gcaagctgac
      721 ccgcgggctg ggcgcggggg cccggcccga gatcggccgc caggcgatcg aggagaaccg
      781 ggacgaggtg gccgcggcgg tccagggggc cgacatggtc ttcgtgacct gcggcatggg
      841 tggcggcacc ggcacggggg cggcgccggt cgtggcccag atggcccggg aatccggggc
      901 gctcaccgtc ggcatcgtga ccaagccctt cctgttcgag ggccgccggc ggatgaagca
      961 ggccgagggt gggatcaacg agctgcgcaa gaacgtggac accatgatcg tggtcccgaa
     1021 cgagcggctg ctcgcggtgg tcgggaaggg gatccccttc caggactcgc tcaagaagac
     1081 cgacgaggtg ctgctccagg
//
LOCUS       DATIFF010000959         1209 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1504429, whole genome shotgun sequence.
ACCESSION   DATIFF010000959 DATIFF010000000
VERSION     DATIFF010000959.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1209
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1504429"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..321)
                     /locus_tag="VLD58_14025"
     CDS             complement(<1..321)
                     /locus_tag="VLD58_14025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55473.1"
                     /translation="MTSRILALAVLVPLTVEAQAAPPLERLVPRFTAMTAILGYEQAV
                     ADTIASLIPGARRDAQGNVTVALGAQPVTLVACRMGEPGYVVGNIRDDGWLTLRRVGP
                     LPDTL"
     gene            complement(415..>1209)
                     /locus_tag="VLD58_14030"
     CDS             complement(415..>1209)
                     /locus_tag="VLD58_14030"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSB55474.1"
                     /translation="VVGRLLRELPAGSRPLVFTKCGLVWDEANRMAPPRQTLEPASIR
                     RECEASLRRLGVERIDLYQFHWPDESGTEIEDSWEEMGRLIAEGKVRFGAVSNFDVGL
                     LTRCEHIGHVASLQPPFSPIRRAAAAEVIPWCVRHDTGVIVYSPMQAGILTDDFDAER
                     IRRMADDDWRHGSTEFQSPKLERNLALRDALRPVARRHGTTVQAVAVAWTLAWPGVSG
                     AIVGARSPKQVDGWIGAANLVLEPADLDEIAAAIDRTGAGQGPARP"
BASE COUNT          190 a          437 c          406 g          176 t
ORIGIN      
        1 cagcgtatcc ggcagcggcc ccacccggcg cagcgtgagc cagccgtcat cccggatgtt
       61 ccccacgacg tatccgggct cgcccatccg gcaggcaacc agggtgactg gctgcgctcc
      121 cagcgccacg gtcacgttgc cctgcgcgtc ccggcgggcg ccgggaatca gggaggctat
      181 agtgtccgcc acagcctgct cgtaccccag gatcgcggtc atcgccgtaa accgcgggac
      241 cagtcgctcc aggggtggag ccgcctgggc ctcgaccgtc aggggaacca gcacggcgag
      301 agccagaatc ctcgatgtca ttggtcggcc tggatagtga aggaagccgc tgcgttgcac
      361 atgcgggagg aagtgtctcg gcgtggtccg cttgtcactc cgtgaccggg atcatcatgg
      421 ccgcgccggc ccctgcccgg cgccggtccg gtcgatggcc gccgcgatct cgtccaggtc
      481 ggccggctcg agcacaagat tcgccgcgcc gatccagcca tccacctgct ttgggctccg
      541 ggcaccgaca atggccccgg agacgcccgg ccatgcgagt gtccaggcga ccgccaccgc
      601 ctgcaccgtg gtgccgtgac gtcgggcgac ggggcggagc gcgtcacgca gcgccaggtt
      661 gcgctccagc ttgggcgact ggaactcggt ggagccgtgc cgccagtcgt cgtccgccat
      721 gcggcggatc cgctccgcgt cgaagtcgtc ggtcaggatt cccgcctgca tcgggctgta
      781 gacgatcaca ccggtatcgt gacggacaca ccaggggatg acctcggccg ccgcggcccg
      841 ccggatcggg gagaacggcg gctgcaggga agccacatgg ccgatgtgct cacaccgggt
      901 cagcaggcca acgtcgaagt tggagacggc gccgaagcgc acctttccct cggcaatcag
      961 ccggcccatc tcctcccacg agtcctcgat ctccgttccg gactcgtccg gccagtggaa
     1021 ctggtagaga tcgatccgct ccacgccgag ccgcctgagc gaggcctcac attcgcgacg
     1081 gatcgacgcc ggctcgaggg tctgccgcgg cggggccatc cggttcgctt cgtcccacac
     1141 cagcccgcac ttggtgaaga cgagcggccg cgaaccggcc ggcagctccc gaaggagccg
     1201 gcctaccac
//
LOCUS       DATIFF010000960         4470 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2272977, whole genome shotgun sequence.
ACCESSION   DATIFF010000960 DATIFF010000000
VERSION     DATIFF010000960.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4470
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2272977"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1696
                     /locus_tag="VLD58_14035"
     CDS             <1..1696
                     /locus_tag="VLD58_14035"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HSB55475.1"
                     /translation="EKRVEDDSRDRLPRWYADNGYIDFQVLGDTLVPDSTTGKALLKL
                     TVDEGQAYQIGNIDIQGNRRFSSEELKAYIPFEGHQPFNRSEWESATEKVSNLYANNG
                     YIYARVDPIETRRTAEDGTQYLDLSWIIREGAPATINKVEIVGNDITHERVIREAIVL
                     LPGDLFNRELLIRSYQNISNLGFFQQPLPAPDVRPAANGIDVDVVFRVEEKRTGNINF
                     GASLGQGTGVGGFLGLEEPNLFGRGKKGQLRWQFGANINDFTLSYTDPAIRDSRVSGT
                     LTLFDSRQTFIVGDLGQRQQLGGEVRIGFPFLGSRYTRIFGSYGLQRINYTQGSEDLR
                     RRFACSDCTRSTVGAALLRDTRIGLPFPVAGTYFNLGGELNGGFLGGTSDYQKIDLEG
                     RWYAPLGTVGGGGQLGQGVQFVLGLTAKSGFIFGDAGPFFTELYSMGGVQFGIPLRGY
                     NEFSITPNGYDPNASSGQASVNAFGKSFAAFTVEAGARISGALYVDTFLDAGNIYRTA
                     RQYDPTRLFRGAGFGAAVVSPLGPLGIDIAYGFDKVDVFGRPAPGWQLHFKLGNTF"
     gene            1728..2321
                     /locus_tag="VLD58_14040"
     CDS             1728..2321
                     /locus_tag="VLD58_14040"
                     /inference="COORDINATES: protein motif:HMM:NF015871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HSB55476.1"
                     /translation="MKLVVHRTWIGLVLAAVLVAVPSAAQQKPAAKPSQPKPSTADAE
                     GSGATRIGFVNIQAILKATPGYAKAESTFAKELDGYRSEVQKLQAGLDSAAQDFEAQS
                     AVLSPTQRTQRRKDLEAQQEKLQQRTQELQQKAATRERELLDPIQARVNSVIEGIRAA
                     GNYAIIFDVSAPGNGIVTGDKSLDLTQRVLQQLQASK"
     gene            2413..2841
                     /gene="fabZ"
                     /locus_tag="VLD58_14045"
     CDS             2413..2841
                     /gene="fabZ"
                     /locus_tag="VLD58_14045"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: protein motif:HMM:TIGR01750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HSB55477.1"
                     /translation="MDIERILSVLPHRYPFLLVDRILEVDGATRIVGLKNVTINEPFF
                     QGHFPGHPIMPGVLIVEAMAQVGGCLVMGTIERPETKVVYFMALDRVRFRRPVRPGDQ
                     LRLEVEVLQVRGPTCRLKGIATVDGKVAAEAEMMAQVVDR"
     gene            2845..3885
                     /locus_tag="VLD58_14050"
     CDS             2845..3885
                     /locus_tag="VLD58_14050"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: protein motif:HMM:NF014645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HSB55478.1"
                     /translation="MARRGDTHRLLRWLWTSRRPEARLSRLALLPASALYRGAMAARA
                     AGYRRGWFAVRDLPAPCVAVGNLTLGGSGKSAIAAWIAQHYADQGIRPALLVPGGTSA
                     DVLVQRHAVPAALVLGDRDPVPAAERAVAQGAQVLVLDDAYQRLDVHRDLNLAVVAAE
                     TTRAVRWALPAGPWREGWAALRRADGAIVTRKRATLEAAQTLAREIEQEIRGPVALAY
                     LGLRHLEGLVSGTRQPASVLAGKRVVAASGIADPDAFVAQTKATGAAVQVATWKDQPD
                     YRDEDVAWLAHAARRADHVVITEKDAVKLRDRWPHRVPEPLVAVLELAWEGGGEAIAA
                     ALDAVVTPVDRL"
     gene            3917..>4470
                     /locus_tag="VLD58_14055"
     CDS             3917..>4470
                     /locus_tag="VLD58_14055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase dimerization
                     domain-containing protein"
                     /protein_id="HSB55479.1"
                     /translation="MTTTTPQSVPLIRPERDRFLAEENPFEAMMSRFDFAAQKLSLDP
                     GLYQVLRAPEKQVIVAVPYLKDAGGVEVLTGYRVLHNRARGPAKGGIRFDLGVTLDEV
                     KALAAWMTWKCAVVNIPFGGSKGGVVCDPSQLSNAELERITRRCTSAIIETLGPDSDV
                     PAPDVNTNERVMAWVMDTYSMHVR"
BASE COUNT          724 a         1548 c         1548 g          650 t
ORIGIN      
        1 cgagaagcgg gtcgaggacg acagtcggga ccggctgccc cggtggtacg ccgacaacgg
       61 ctacatcgac tttcaggtcc tgggcgacac gctcgtcccc gattccacga ccggcaaggc
      121 gctgctcaag ctcaccgtgg acgagggaca ggcctaccag atcggcaaca tcgacatcca
      181 ggggaaccgg cgcttctcgt cggaggagct caaggcctac atcccgttcg aggggcatca
      241 gccgttcaac cggtcggaat gggagagcgc caccgagaag gtatcgaacc tctacgcgaa
      301 caacggctac atctacgccc gcgtcgaccc gatcgagacc cggcggacgg cggaggacgg
      361 tacccagtac ctcgatctgt cctggatcat ccgggagggt gcgccggcca cgatcaacaa
      421 ggtcgagatc gtcggcaacg acatcaccca cgagcgggtg atccgcgagg ccatcgtgct
      481 cctgccgggc gacctcttca accgcgagct cctgatccgg tcgtaccaga acatcagcaa
      541 cctgggtttc ttccagcaac cccttccggc gccggacgtg cgaccggcgg ctaacgggat
      601 cgatgtggac gtcgtcttcc gggtcgaaga gaagcggacc ggcaacatca acttcggcgc
      661 ctcgctgggg cagggcaccg gggtgggcgg atttctcggg ctggaggagc cgaacctctt
      721 cggccgcggc aagaagggcc agctccgctg gcagttcggc gccaacatca acgacttcac
      781 gctctcctac accgacccgg cgatccgtga cagccgcgtc tccggaacgc tgacgctgtt
      841 cgactccagg cagacgttca tcgtcggcga cctcggccag cgccagcagc ttggcggcga
      901 ggtacgcatc ggcttcccgt tcctggggtc ccgctatacc cgcatcttcg gctcgtacgg
      961 actacagcgg atcaactaca cccagggatc ggaggacctg cgccgccgct tcgcctgcag
     1021 cgactgtacc cgatccaccg tcggggcggc ccttctgcgg gacacccgga tcgggctgcc
     1081 ctttcctgtg gccggcacct acttcaatct gggcggcgag ctcaacggcg gattcctggg
     1141 cggcaccagc gactaccaga agatcgatct cgaggggcgg tggtacgcgc ccctcgggac
     1201 cgtgggcggg ggggggcagc tgggccaggg cgtccagttc gtcctcggcc tcaccgccaa
     1261 gtccggcttc atcttcggcg acgccggtcc gttcttcacg gagctatatt cgatgggcgg
     1321 cgtgcagttc gggatcccgc tccggggcta caacgagttc tcgatcacgc ccaacggcta
     1381 cgatcccaac gccagcagcg gccaggccag cgtgaacgcc ttcggcaagt cgttcgcggc
     1441 gttcacggtc gaggcgggcg cccggatcag cggtgcgctc tacgtggaca cgttcctcga
     1501 tgcgggcaac atctaccgga cggctcgcca gtacgatcca acccggctct tccgcggcgc
     1561 gggattcggg gcggcggtgg tgtcgccgct cgggccgctc gggatcgaca tcgcgtacgg
     1621 cttcgacaag gtggacgtat tcgggcggcc cgccccggga tggcaactgc acttcaagct
     1681 gggcaacacc ttctgagcag gacgcacctt cagagcggga gcggagcatg aagcttgtcg
     1741 ttcatcgtac ctggatcggg ctcgtcctgg cggccgtgct ggtcgcggtc ccctcggccg
     1801 cccagcagaa gccggcggcg aagcccagcc agccgaagcc ctccaccgcg gatgccgagg
     1861 gctcgggtgc cacccggatc ggcttcgtga acatccaggc gatcctcaag gcgacgcccg
     1921 gctacgccaa ggccgaatcg accttcgcga aggagctgga cggctaccgg tcggaggtgc
     1981 agaagctcca ggccggactc gactcggcgg ctcaggattt cgaggcccag tcggcggtcc
     2041 tgagcccgac ccagcggacc cagcggcgga aggatctcga ggcgcagcag gagaagctgc
     2101 agcagcgcac ccaggagctc cagcagaagg ccgcgacccg ggagcgggag ctgctggatc
     2161 cgatccaggc cagggtgaac agcgtcatcg aggggatccg cgctgcgggc aactacgcga
     2221 tcatcttcga cgtgagcgcc cccggcaacg gcatcgtgac gggggacaag tcgctggatc
     2281 tcacccagcg ggtactccag cagctgcaag cctcgaagta agtcgcgcgt gcgcgcagcc
     2341 cgatgtaccc ggccaggcgg tcgccgacgc agtcggcggc cgcctgtcgt ctaaggaccc
     2401 acgggccttc ctatggacat cgagcgcatc ctctccgtcc ttccccaccg ttatccgttc
     2461 ctgctcgtgg accggattct cgaggtggat ggcgcaaccc gcatcgtcgg gctcaagaac
     2521 gtcaccatca acgagccctt cttccagggt cattttcccg gtcatcccat catgccgggc
     2581 gtgctcatcg tcgaggcgat ggcccaggtc ggcggctgcc tcgtgatggg gaccatcgag
     2641 cgcccggaga ccaaggtggt ctacttcatg gccctggatc gggtccgctt ccgccgcccg
     2701 gtccgcccgg gcgatcagct gcgcctcgag gtcgaggtgc tccaggtacg cggacccacc
     2761 tgtcgcctga agggcatcgc cacggtcgac ggcaaggtcg ccgccgaggc cgagatgatg
     2821 gcccaagtcg tggatcgctg acgcatggcc cggcgcggcg acacccaccg gctgctgcgc
     2881 tggctctgga ccagccgccg gcctgaagcg cgcctctcgc ggctggcgct gctgccggcg
     2941 tccgcgctct accgcggggc gatggccgcg cgcgcagccg ggtaccggcg tggctggttc
     3001 gcggttcgag acctccccgc gccgtgtgtt gccgtgggga acctgacgct gggcggctcg
     3061 ggcaagagcg cgatcgccgc gtggatagca cagcattacg ccgaccaggg catccggccc
     3121 gcgctcctgg tgcccggggg aacctcggcc gacgtgctgg tgcagcgcca cgccgtgccg
     3181 gccgcgctgg tgctcggcga ccgcgacccg gtcccggcgg cagagcgcgc cgtggcgcag
     3241 ggcgcccagg tgctggtgct cgacgacgcg taccagcggc tcgatgtcca ccgcgacctc
     3301 aacctcgcgg tggtcgcggc ggagacgaca cgggccgtgc gatgggcgct gccggcaggg
     3361 ccgtggcgcg agggctgggc ggcgctccgg cgcgccgacg gcgcgatcgt gacccggaag
     3421 cgggccaccc ttgaggcggc gcagacgctg gcgcgcgaga tcgagcagga gatccggggc
     3481 ccggtggccc tggcgtatct cgggctccgg cacctcgagg ggctggtgag cggcacccgg
     3541 caaccggcca gcgtgctcgc cgggaagcgg gtcgtggcgg cgtccggcat cgccgatccc
     3601 gacgcgttcg tagcgcagac caaggccacc ggcgccgcgg tgcaggtggc cacctggaag
     3661 gaccagccgg actaccgcga cgaggacgtc gcctggctgg cgcacgcggc ccggcgggcg
     3721 gaccacgtcg tgatcaccga gaaggacgcc gtgaagctgc gcgaccgatg gccccaccgg
     3781 gtgccggaac cgctggtggc ggtgctggag ctcgcctggg agggcggcgg ggaggcgatc
     3841 gccgcggcgc tggacgcggt cgtcaccccc gtggaccgac tctaaccgag agagcccgga
     3901 gcaacccgga gacaccatga ccaccaccac gccccaaagc gttccgctca ttcgccccga
     3961 aagggaccgc ttcctcgccg aggagaaccc gttcgaggcg atgatgtccc gcttcgactt
     4021 cgccgcccag aagctgagtc tcgatcccgg actctaccag gtgctccgcg cgcccgagaa
     4081 gcaggtcatc gtcgccgtcc cgtacctgaa ggacgccggc ggggtcgagg tgctcaccgg
     4141 ctaccgggtc ctgcacaacc gggcgcgagg cccggccaag ggaggcatcc gcttcgatct
     4201 gggcgtgacc ctggacgagg tcaaggcgct ggccgcctgg atgacctgga agtgcgcggt
     4261 ggtcaacatc ccgttcggcg ggtccaaggg cggcgtcgtc tgcgacccga gccagctctc
     4321 gaacgcggag ctggagcgga tcacgcggcg gtgcacctcg gccatcatcg agaccctcgg
     4381 accggactcg gacgtcccgg cgcccgacgt gaacaccaac gagcgggtga tggcctgggt
     4441 catggacacc tactcgatgc acgtgcggca
//
LOCUS       DATIFF010000961         1196 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_580981, whole genome shotgun sequence.
ACCESSION   DATIFF010000961 DATIFF010000000
VERSION     DATIFF010000961.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1196
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_580981"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..254)
                     /locus_tag="VLD58_14060"
     CDS             complement(<1..254)
                     /locus_tag="VLD58_14060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55480.1"
                     /translation="MKQALNESVGRVIAGAASLLPGFVALLVALTTAALVGWLMAFVV
                     RRFLRGIDFDSRVNRIGLSGLAELAPGKSPTLLLARTTLWL"
     gene            complement(289..>1196)
                     /locus_tag="VLD58_14065"
     CDS             complement(289..>1196)
                     /locus_tag="VLD58_14065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55481.1"
                     /translation="GARGSAIVGSDPATISAEALRRLVEPVLDGVDLVTPLYLRRRYE
                     GLLLSAVVAPLLRALYGYRILYPIGADFGFSARMIEQQIQLPSTGREGIPVWLTSDAA
                     TAGFRLAQAHLGIALPAQRDPPEVSAAVAQVLGPLFLDLERKAPSWQKVRGSQAVPTL
                     GTARVMVDEPPPVDLSRMIETFGLGFRNLQGVWGAVLPPAALLELKRLSGMAPAEFRL
                     PDELWARIVYDFALAHRLRLMSRDHLLKAMTPIYLAWVASYANEVGTAPAVAVEYRLE
                     RLGATFEAQKPYLMSRWRWPDRFQP"
BASE COUNT          199 a          412 c          429 g          156 t
ORIGIN      
        1 agccagaggg tggtgcgggc caggaggagc gtcgggctct tgcccggggc cagctcggcc
       61 aggccggaga ggccgatccg gttgacccgg ctgtcgaagt cgattccgcg caggaaccgc
      121 ctcacgacga aggccatcag ccagccgacc agggcggcag tggtcagggc gacgagcagg
      181 gcaacgaagc cgggcaggag actcgccgct ccggcgatca cccgtcccac cgactcgttc
      241 agggcctgct tcacttgctc ccacattgcg ggctccttcc ctcggcggtc atggttggaa
      301 ccgatcgggc catcgccacc gggacatgag gtagggcttc tgggcctcga aggtggctcc
      361 aagtcgctcc aggcgatact cgactgccac cgcgggggcg gtgccgacct cgttcgcgta
      421 cgacgccacc caagccaggt agatcggcgt catcgccttg agcaggtggt ctcggctcat
      481 cagtcggagc cggtgcgcca gggcgaaatc gtagacgatc cgggcccaga gctcgtccgg
      541 cagccggaac tccgccgggg ccatgccaga gaggcgtttg agctcgagga gcgcggcggg
      601 cggcagcacc gcgccccaca ccccctgcag gttccggaag ccgagcccga aggtctcgat
      661 catccgactc aggtccaccg ggggcggctc gtccaccatc acgcgggccg tgcccagggt
      721 aggcaccgcc tgcgatcctc gcaccttctg ccaggagggc gccttccgct ccaggtcgag
      781 aaacaggggg ccgaggacct gggccacggc cgcgctcacc tcgggcggat cgcgctgagc
      841 cggcagcgcg atgcccaagt gcgcctgggc cagccggaag ccggcggtcg cggcgtcgct
      901 ggtgagccag accgggatcc cttcgcggcc tgtggacggc agctggatct gctgctcgat
      961 catccgggcc gagaagccga agtcggcccc gatgggatac aggatccggt agccgtaaag
     1021 cgcgcgaagg aggggggcga ccacggcgct cagcagaagc ccctcgtacc gacgccggag
     1081 atagagcggg gtcaccagat cgaccccatc gaggaccggc tccaccagcc ggcggagggc
     1141 ctccgcgctg atcgtggcgg gatcggagcc gacaatggcg gacccgcgtg ctcccg
//
LOCUS       DATIFF010000962         1204 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1811386, whole genome shotgun sequence.
ACCESSION   DATIFF010000962 DATIFF010000000
VERSION     DATIFF010000962.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1204
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1811386"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1204)
                     /locus_tag="VLD58_14070"
     CDS             complement(<1..>1204)
                     /locus_tag="VLD58_14070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55482.1"
                     /translation="LPAVSSGTEEALRRSHPVRVVLSFLAAAVVTLAIVFLVVRQFGL
                     HDWVFYGANVLMALGLPIILATGYFERKRAEARATGRIMSPAASGVHRLFTWKKAIRG
                     GFLAFAALAVAVIIYTGMRLLGIGPVGTLVASGKLNETDKLLVADFENHTADASLGPS
                     ITEAFRIDLGQTPVVRILTTSQVSDGLRRMQKEVTTPVTGDLARELATREGAKAVVTG
                     EISTIGKSYVLVARILGAGDGTELVALRETAESDAGIVAALDRLAGRVRERIGESLKT
                     IRGGESLEQVTTSSLEALRLYTEGSKLNDNGEPGRAVPLLEQAVALDSGFAMGWRKLA
                     VAVGNAGGGLDRVTEATSRAYQHRDRLTEIERQLTIAYYYSQVDWDLSKADAAYRKVL
                     AIYPDHFIA"
BASE COUNT          194 a          416 c          389 g          205 t
ORIGIN      
        1 ggcgatgaag tgatcgggat agatggccag gactttccgg taggcggcat cggccttgga
       61 gaggtcccag tccacctggc tgtagtaata ggcgatggtg agttgtcgct cgatctccgt
      121 cagacggtcg cggtgctgat atgctcggga ggtggcctcc gtgacccggt cgagaccccc
      181 gccggcgttg cccaccgcca ccgcgagctt gcgccacccc atcgcgaagc cggaatcgag
      241 tgccaccgcc tgctccagca gcggcaccgc gcggccgggt tctccattgt cattcagctt
      301 gctgccctcg gtgtacagcc gcagcgcctc gagagaagag gtggtgacct gctccagcga
      361 ctcaccgccc cggatggttt tgagcgactc gccgattcgc tcccgcactc tgccggccag
      421 ccggtcgagt gcggccacga tgccggcatc gctctcggcg gtttcccgga gtgccaccag
      481 ttcggtgcca tcaccggcgc cgagaatgcg ggccaccagc acgtagctct tgccgatggt
      541 gctgatctca cccgtcacga cggccttggc gccttcgcgg gtcgccagtt cgcgagccag
      601 gtcgccggtc accggtgtgg tcacttcctt ctgcatccgg cgcagcccat cgctgacctg
      661 cgaggtcgtc agaatccgca ccaccggcgt ctggcccagg tcgatccgga acgcctcggt
      721 tatcgaaggg ccaagactcg catctgctgt gtgattctcg aagtcggcga ccagcagttt
      781 gtcggtctcg ttcagcttgc ccgaggcgac cagggttccc accggtccga tgcccagcag
      841 ccgcatgccg gtgtagatga tgaccgccac cgccagggcc gcaaatgcga ggaagcctcc
      901 ccgaatcgcc ttcttccagg tgaacaggcg gtgcacaccg ctggcggccg gcgacatgat
      961 gcgcccggtg gcccgggcct cggcccgttt ccgctcgaag tagccggtcg ccagaatgat
     1021 cgggaggccg agcgccatca ggacgttggc gccgtagaag acccagtcgt gcaggccgaa
     1081 ctggcgcacc accaggaaca cgatggcgag agttaccacc gcggccgcga ggaaactcag
     1141 taccacccgg accgggtggc tgcggcggag cgcctcctcg gttccactcg acaccgccgg
     1201 cagc
//
LOCUS       DATIFF010000963         1413 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1811582, whole genome shotgun sequence.
ACCESSION   DATIFF010000963 DATIFF010000000
VERSION     DATIFF010000963.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1413
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1811582"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..429
                     /locus_tag="VLD58_14075"
     CDS             <1..429
                     /locus_tag="VLD58_14075"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSB55483.1"
                     /translation="SCALAILMIPMVMRTTEELIKLVPNSLREAALALGYSRWRTSLS
                     IVLRTALPGIVTGTLLSVARVAGETAPLLLTALGSQYFSLNLNQPMAALPLTVFQYAI
                     GPYEEWHQFAWAAALVLILVVLVLSVGARLATRRRFTLNG"
     gene            422..1189
                     /gene="pstB"
                     /locus_tag="VLD58_14080"
     CDS             422..1189
                     /gene="pstB"
                     /locus_tag="VLD58_14080"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HSB55484.1"
                     /translation="MAEAPVRLRAEKLTAVYGKFTAVKNVSLAFPANTVSALIGPSGC
                     GKSTFLRTLNRMHELTEGGWTTGQVLLDGADIYDSKVSPMQLRRRIGMVFQKPAPFPT
                     MSIYDNVAAGLRINGRLARGELDTVVELSLRQAALWDEVKDRLKTSAMALSGGQQQRL
                     CIARTIAPRPDVVLLDEPTASLDPAGTQRIEELVFELKREFTIVIVTHNMQQAARVSD
                     TTTFFYMGTMVETGPTRQLFTAPREERTEAYITGRFG"
     gene            1195..>1413
                     /locus_tag="VLD58_14085"
     CDS             1195..>1413
                     /locus_tag="VLD58_14085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55485.1"
                     /translation="MTPDRPAPAPNTDVAQAAVPAQPAIPLLRTTLTRRSASVPPAEP
                     AQTAIAARDFRFSYGGAALTLKGITLEVP"
BASE COUNT          220 a          516 c          465 g          212 t
ORIGIN      
        1 agctgcgccc tggcgatcct catgatcccg atggtgatgc gcaccaccga ggagctgatc
       61 aagctggtgc cgaactcgct ccgtgaggcg gcgctcgcgc tgggctattc ccggtggcgc
      121 accagcctga gcatcgtcct ccgcaccgcg ctgcccggca tcgtgaccgg caccctgctc
      181 tcggtggccc gagtggccgg cgagacggcg cccctgctcc tcacggcgct cggcagccag
      241 tacttctcgc tcaacctcaa tcagccgatg gcggcgctgc cactcaccgt cttccagtat
      301 gccatcgggc cctatgagga gtggcaccag ttcgcctggg ccgcggccct ggtgctgatc
      361 ctcgtggtgc tggtgctcag cgtgggcgca cggctcgcaa cccgccggcg gttcaccctc
      421 aatggctgag gcgccggtgc ggctccgggc cgagaagctc accgcggtgt acggcaaatt
      481 caccgcggtg aagaacgtct ccctggcctt ccccgccaac acggtcagcg ccctgatcgg
      541 tccctcgggg tgcggcaagt cgacgtttct ccggaccctc aaccggatgc acgagctcac
      601 cgaaggcggc tggaccaccg gccaggtgct gctggacggg gccgacatct acgactccaa
      661 ggtgagcccg atgcagctcc gccgccgcat cggcatggta ttccagaagc ccgccccgtt
      721 tcccacgatg tcgatctacg acaatgtggc ggcggggctc cggatcaacg gcaggctcgc
      781 ccggggcgag ctggacacgg tggtggaact gtcgctccgg caggcggcgc tctgggacga
      841 ggtgaaggac cggctcaaga ccagcgcgat ggcgctctcg ggcgggcagc agcagcggct
      901 ctgtatcgcg cggaccatcg cgccccgacc cgacgtggtc ctgctggacg agccgaccgc
      961 gtcgctcgat cccgccggga cccagcggat cgaggagctg gtattcgagc tcaagcgcga
     1021 gttcacgatc gtgatcgtga cccacaacat gcagcaggcc gcgcgggtga gcgacacgac
     1081 gaccttcttc tacatgggca cgatggtcga gaccggtccc acccggcagc tgttcaccgc
     1141 cccccgggaa gagcggacgg aagcctacat tacgggacgc ttcggatgag caccatgacc
     1201 ccagaccgac cggcgccggc gccgaacacc gacgtggccc aggctgccgt ccccgcgcag
     1261 ccggccatcc ccctgctgcg cacgacactc acccggcgct ccgcctccgt gccgcccgcg
     1321 gagccggcgc agacggcgat cgccgcgcgt gacttccgct tctcctacgg cggcgcggcg
     1381 ctgacgctca aggggatcac gctggaggtg ccg
//
LOCUS       DATIFF010000964         1107 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_119675, whole genome shotgun sequence.
ACCESSION   DATIFF010000964 DATIFF010000000
VERSION     DATIFF010000964.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119675"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1107
                     /locus_tag="VLD58_14090"
     CDS             <1..>1107
                     /locus_tag="VLD58_14090"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB55486.1"
                     /translation="VLHPELSLSLGSERFLREIQIAARLQHPHIVPLYDSGAAGDLLY
                     YVMPFVEGESLRQRLERSPQLPLEEAVQLARAVASALDYAHRQQIVHRDIKPENVMLH
                     EGEAVVTDFGIAKAVSAAVSGSLTQTGTAVGTPSYMSPEQASGEPELDARSDIYSLGA
                     MLYEMIGGVAPFAGPTIQAIIAKLFTEPAAPLREQRPDVPDWLDSAVMKALAKQPAGR
                     YATASQFAQALTWPSGTSTPPGMRTASAAAKSIAVLPFVNMSNDPENEYFSDGIAEEI
                     INALTKIQALRVASRTSSFAFKGKSEDIGEIGRKLKVATVLEGSVRKAGSKLRVTAQL
                     VNVADGYHLWSERYDRQLEDVFAIQDEIAENIVRA"
BASE COUNT          195 a          375 c          376 g          161 t
ORIGIN      
        1 gtgctccatc ccgagctctc gctgagcctg ggctcggagc gcttcctccg tgaaatccag
       61 atcgccgccc ggctccagca tccgcatatc gtgccgctct acgactcggg tgccgccggt
      121 gacctgctct actacgtgat gcccttcgtg gagggagaat cgctccggca gcggctggag
      181 cgcagccccc agctcccgct ggaggaggcg gttcagctgg cccgggcagt ggcctcggcg
      241 ctcgactacg cccatcgcca gcagatcgtg caccgggaca tcaagcccga aaacgtgatg
      301 ctgcatgagg gagaggccgt cgtcaccgac ttcgggatcg ccaaggcggt gagcgccgcg
      361 gtctccggaa gcctgaccca gaccgggacc gcggtgggga cgccatccta tatgagcccg
      421 gaacaggcgt ccggggaacc ggagctcgac gcccggagcg acatctattc cctgggcgcg
      481 atgctctacg agatgatcgg cggcgtggcc cctttcgcgg ggccgacgat ccaggccatc
      541 atcgccaagc tgttcaccga gccggccgcc ccgctccggg agcagcggcc cgacgtgccg
      601 gactggctgg attcggcggt aatgaaggcc ctggccaagc agccggccgg acgctatgcg
      661 acggcgagcc agttcgccca ggcgctgacc tggcccagcg gcacctccac gccgcccggc
      721 atgcggaccg cctcggcggc ggccaagtcc atcgcggtgc tgccgttcgt caacatgagc
      781 aacgatccgg aaaacgagta tttcagcgac ggcatcgccg aggagatcat caacgcactc
      841 accaagatcc aggcgctgcg ggtggcctca cggacctctt cgttcgcgtt caagggcaag
      901 agcgaggaca tcggcgagat cgggcggaag ctcaaggtcg ccacggtgct ggaggggagc
      961 gtgcgcaagg cgggcagcaa gctccgcgtc acggcccagc tggtgaacgt ggcggacggc
     1021 tatcacctct ggtccgagcg gtacgaccgg cagctggagg acgtgttcgc catccaggac
     1081 gagatcgccg aaaacatcgt gcgggcc
//
LOCUS       DATIFF010000965         1296 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_887201, whole genome shotgun sequence.
ACCESSION   DATIFF010000965 DATIFF010000000
VERSION     DATIFF010000965.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_887201"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(198..1182)
                     /locus_tag="VLD58_14095"
                     /pseudo
     CDS             complement(198..1182)
                     /locus_tag="VLD58_14095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011728598.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
BASE COUNT          204 a          440 c          454 g          198 t
ORIGIN      
        1 aaggccagca cgcaagagca ctccccccaa caccagaagt agcgggtcca tcaagatcgg
       61 ctggagacgg ggggccagag cagctagtgc tccgtaactg acgtcgtttg tatcttgcgg
      121 tggtgcgggt cggtggcctt ggcgatgacg gtgtcagggt ccttggtcca ggtgaacggt
      181 gcgcagcggt catttcaggc gtcgatgaac cgctcgatgg cggcgatgag gtcggcgacc
      241 gtggggaagc tgccgcggcg cagcgcctga cgggtggtga tcgagaagga cgcctccacc
      301 agattcagcc aggaccctga ggtcggcgtg aagtgcaggt gcaggcgggg atgccgcttg
      361 agccagaccc ggacggcggg atgcttgtgg gtggcgtagt tgtcgaccac gacgtgcagt
      421 tcgcagcgcg gataggcgcc ggcgacctgc ttgaggaacg ccaagaactc ctgatggcgg
      481 tgccggtcgg tgcaggcctc ggccaccttg ccggtggcca cttccagcgc ggcgaacagg
      541 gtcgtggtgc cgtgccggcg gtagtcgaag ctggccgcct cggggtggcc ggcggacggg
      601 cagcaccggc gcagtccgct ccagggcctg cagctgcggt ttctcgtcca cgcagagcac
      661 caccgccttc tccggtggat gcagatagag cccgacgacg tcgcggatct tgccctccag
      721 ctgcggatcg gtggggaact tgaacgtctc cgcgtgcccg ggctgcacgt cgaagcggtg
      781 ccagatccgg gcggtcgtgg cgtgtgagag cggtgtcccc tccgcggcca gccgctccgc
      841 cagcagccgc gacgaccagt gcgtcacgcc gtactcagtg ggtggctcgg tcagcgtcag
      901 ctccagcacc cgatcccgca gcgcctccgg cagcggcgac ggtttccccg gccgtggctc
      961 atcctcaagt ccggccaggc cctgctcggc ggagcggcgc cgccaggtga ccaccgtcgg
     1021 ctcggcgcag ctcacttggg cagcgatctg cttgcccggc actccgtcgg cggccagcag
     1081 cacgatccgg gcccgctcga ccacccgggc cggcacgccc ttgctccgcg cccggcgctg
     1141 cagctcccgg cgatcagcct ccggcacctc cacgatgcac acccgattcg ccatgaacca
     1201 tcgtcacgcc accattcaaa aacatcaacg atcaccgcga cggagcacta gcgagaccgg
     1261 ctcctcgggg gcacccacgt tcaccggggt ggcaga
//
LOCUS       DATIFF010000966         1147 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1350660, whole genome shotgun sequence.
ACCESSION   DATIFF010000966 DATIFF010000000
VERSION     DATIFF010000966.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1147
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1350660"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            145..1137
                     /locus_tag="VLD58_14100"
     CDS             145..1137
                     /locus_tag="VLD58_14100"
                     /inference="COORDINATES: protein motif:HMM:TIGR02824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase"
                     /protein_id="HSB55487.1"
                     /translation="MRAIVHTAPGGPEVLALQEVPTPTPGPGQIRVRVCAAGLNRADL
                     LQRRGAYAAPPGWPANIPGLEYAGEVEALGEGVTRWRPGDHVMGLVGGGAHAEFVVVH
                     QDEVIRVPDGLGFIEAAAIPEAFLTGWDALVTRGRLGAGERVLLHAVGSGLGTAMILL
                     ARRLGATILGTSRTPAKLAQAKAMGLDAGIDTSAGSFRAAIDPPVNVVIDVLGGPAFA
                     DNLAVLAPRGRLVMLGFLQGPLVETSLEPVLRKRLEVVGSVMRTRGLEERIALVTEFS
                     RRVLPWFEGEDRIRPVIGATFPMTAVAEAHRAMEANEPFGKIVLTWQEAGSSKQ"
BASE COUNT          173 a          354 c          449 g          171 t
ORIGIN      
        1 aggccggtgc gttcctgcga ggtgtccttg ctctgggcgg ccagggtcga ggcggtcagg
       61 gcggctgcga cgagcgctgc gagcgggacg cgacgggcga acgacatgcc tagtctccat
      121 tgaaagggat cggataagat agccatgcgc gccattgtcc atactgcccc tggcggcccc
      181 gaggtccttg ccctgcagga ggtcccgacg ccgactcccg gaccgggaca gatccgggtg
      241 cgggtctgtg ccgccggcct gaatcgcgcc gacctgctcc agcgccgagg cgcctatgcg
      301 gccccgccag gctggccggc gaacatcccc ggcctcgaat acgccggcga agtcgaagcg
      361 ctcggtgagg gtgtgacgcg atggcgcccg ggagaccacg tgatgggtct cgtgggcgga
      421 ggggctcacg ccgaattcgt cgtggtgcac caggacgaag tgatccgggt ccccgacggt
      481 ctcggcttca tcgaggcggc ggccattccc gaagcgttcc tgacgggatg ggacgcgctg
      541 gtgacgcgag ggcggctcgg ggccggggag cgggtgctgc tccatgcggt ggggagcggg
      601 ctcggcacgg ccatgatcct cctggccagg cggctcggcg ccacgattct ggggacttcg
      661 cgcacgcccg ccaagctggc gcaggcgaag gcgatgggac tcgacgccgg gatcgacacc
      721 tcggctgggt cgttccgggc cgcgatcgat ccgcccgtga acgtcgtcat cgacgtgctg
      781 ggcggaccgg cgttcgcgga caacctagcg gtgctcgcgc cgcgcgggcg gctggtgatg
      841 ctgggcttcc tgcagggacc gctggtggag accagcctgg aaccggtgtt gcggaagcgg
      901 ctcgaggtag tcgggtcggt gatgcggacg cggggcctgg aggaacggat cgcgctggtc
      961 accgaattca gccgccgggt gctcccctgg ttcgagggcg aggaccggat ccggccggtg
     1021 atcggagcca ccttcccgat gaccgccgtg gcggaggccc accgggccat ggaggcgaac
     1081 gagccgttcg ggaagatcgt gttgacgtgg caggaggcag gaagcagtaa gcagtaagca
     1141 gtaagca
//
LOCUS       DATIFF010000967         2244 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_887588, whole genome shotgun sequence.
ACCESSION   DATIFF010000967 DATIFF010000000
VERSION     DATIFF010000967.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2244
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_887588"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..454
                     /locus_tag="VLD58_14105"
     CDS             <1..454
                     /locus_tag="VLD58_14105"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF017200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="S16 family serine protease"
                     /protein_id="HSB55488.1"
                     /translation="LSWARSHVSQLGVRSDYWETSDLHVHVPAGAIPKDGPSAGVTLV
                     TALVSLMTQRPVRADLAMTGEVTLTGRVLPVGGIKEKVLAARRAGIKVVIIPKRNEKN
                     LIEDVPAQAREGMTFHLVDSVDQVLNLALEEPIPKDNRVRESLLQAQN"
     gene            527..1258
                     /locus_tag="VLD58_14110"
     CDS             527..1258
                     /locus_tag="VLD58_14110"
                     /EC_number="4.2.2.n1"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HSB55489.1"
                     /translation="MARLLEPARLVLSKGLLAALAVLSGLVLVPDAGADTYRLVDGSG
                     VVHLTNAPADPRYRNLPAGSGSATGWLRMTETSRSLYASEIREISKRHGVDPGLVESV
                     IRAESAFNPTAVSRAGARGLMQLMPKTAIALGVRDSFNPRENIEGGVRHLRYLLDRYP
                     GNVALAVAAYNAGEGAVDAHRGIPPYPETQQYVYRVLRGGGGGGAVWTGGSAVSPRSV
                     YRYAGPNGSVTYSNLPPGSRLTVSR"
     gene            complement(1371..1802)
                     /locus_tag="VLD58_14115"
     CDS             complement(1371..1802)
                     /locus_tag="VLD58_14115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55490.1"
                     /translation="MSRYFDVRTTVLLVVGYGILAEEEDRPIAYELKRAISARREGAN
                     DRSAVVVTDMWMLNQEMAEMFPAVGIGGPAVNAFTAQIYEDLPVAFTRDQQVFIQMNR
                     ERGKRAALWGMDQRGTREAAELFVKEGLLDRFLELVWPRSA"
     gene            complement(1802..>2244)
                     /locus_tag="VLD58_14120"
     CDS             complement(1802..>2244)
                     /locus_tag="VLD58_14120"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HSB55491.1"
                     /translation="LTAAARRLGLGTLVTEQYPKGLGHTLQEVRDTLPAGVQPLEKVA
                     FSCLGADAFRSQLTSTGARQLLLAGIEAHVCVLMSALDLLADGYTVHVVADAVTSRTQ
                     ANWRLAMAQLRQAGAVVTTTETVLFQLLRQADTDDFRELARLIR"
BASE COUNT          353 a          777 c          777 g          337 t
ORIGIN      
        1 cctctcctgg gcccgctccc acgtctcgca gctgggggtg cggtcggact actgggagac
       61 gtcggacctg cacgtccacg tgccggccgg cgccattccg aaagacggtc cctccgcggg
      121 cgtcacgctg gtgacggcac tggtttccct gatgactcag cggccggtcc gggcggacct
      181 cgccatgacg ggggaggtga cactaactgg ccgggtgctg ccggtaggcg gcatcaagga
      241 gaaggtgctt gccgcccggc gcgccgggat caaggtggtc atcattccga aaagaaacga
      301 gaaaaacctc attgaggacg ttccggccca ggctcgcgag ggaatgacct tccatctggt
      361 cgattccgtg gaccaggtgc tcaatctggc cctcgaggag ccgattccga aggacaaccg
      421 ggtcagggag tcgctgctcc aggcccagaa ctgatacaca agtagctgga aaagaagtgg
      481 aagaggccgc ccaagccggg cggcctcttc atcttcgggc tcccccgtgg cacgcctctt
      541 ggagccagca cgtctcgtgc tctccaaagg cctgctcgcc gcgttggcag ttctgtccgg
      601 gctggtgctg gtccccgatg cgggggcgga tacctatcgc ctggtagatg gctcgggggt
      661 cgtgcacctg accaacgctc ccgccgatcc ccgctaccgc aacctgccag cgggctccgg
      721 gtcggcgacc ggttggctgc gcatgaccga gacctcgcgg agcctctacg ccagcgagat
      781 ccgcgagatc tccaagcgcc acggggtgga cccggggctg gtcgagtccg tgatccgcgc
      841 cgagtccgcc ttcaacccca ccgccgtctc ccgcgcgggt gcacgaggct tgatgcagct
      901 gatgcccaag accgcgatcg ccctcggcgt gcgcgactcc ttcaatccga gggagaacat
      961 cgagggaggt gtgcggcacc tgcgctacct gctcgaccgg tatccgggca acgtcgcgct
     1021 cgcggtggcg gcctacaacg ccggcgaggg cgcggtggac gcccaccgcg gcatcccacc
     1081 gtacccggag acgcagcagt acgtgtaccg cgtgctccgg ggtggtggag gcggcggtgc
     1141 cgtctggacc ggtggcagcg cggtgagccc gcgctcggtc taccgctatg ccgggccgaa
     1201 cggctcggtc acctacagca acctgccgcc gggcagccgc ctcaccgtct cccgctaggg
     1261 cctctcccga acctcggccc gaggcgactc gcgcatgagg acacggaagt acggcacccg
     1321 ggccagcgcg tctgcggagc tcacgagcag cggcgagaga cggcggccgg tcaggcggag
     1381 cgtggccaga cgagctcgag gaagcggtcc agcagtccct ccttcacgaa gagctccgcc
     1441 gcctcgcgcg tgccgcgctg atccatgccc cacagcgcgg cccgcttgcc gcgctcccgg
     1501 ttcatctgga tgaatacctg ctgatcccgt gtgaacgcga ccggcagatc ttcgtagatc
     1561 tgggcggtga acgcgttgac cgcaggcccg ccgatgccca ccgcgggaaa catctcggcc
     1621 atctcctggt tgagcatcca catgtcggtc accaccaccg cgctgcggtc gttcgccccc
     1681 tcgcgccgtg cgctgatcgc gcgcttgagc tcgtaggcga tcggtcgatc ctcctcctcg
     1741 gcgaggatgc cgtacccgac caccagaagc acggtggtgc ggacgtcgaa gtagcgggac
     1801 atcagcggat cagccgcgcc agctcccgga aatcgtcggt atcggcctgc cgcagcagct
     1861 ggaagagcac ggtctcggtg gtggtcacca ccgcgccggc ctggcggagc tgggccatgg
     1921 ccaggcgcca gttggcctgg gtgcgcgagg tgaccgcgtc ggccacgacg tggacggtgt
     1981 agccgtccgc gagcaggtcg agcgccgaca tcagcacgca cacgtgggcc tcgatgccgg
     2041 ccaggagcag ctggcgcgcc ccggtggagg tgagctggct gcggaaggcg tccgcgccca
     2101 ggcaggagaa ggcgaccttc tcgagcggct gcacaccggc cggcagggtg tcccggacct
     2161 cctggagggt gtgacccagg cccttcgggt actgctcggt gacgagcgtg cccagcccga
     2221 ggcgccgcgc cgccgcggtc agga
//
LOCUS       DATIFF010000968         2744 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1198273, whole genome shotgun sequence.
ACCESSION   DATIFF010000968 DATIFF010000000
VERSION     DATIFF010000968.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2744
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1198273"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..463)
                     /locus_tag="VLD58_14125"
     CDS             complement(<1..463)
                     /locus_tag="VLD58_14125"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55492.1"
                     /translation="MNLLLGALAEGFLFTALALGLYLSWRIYAILDLTVDGAFALGAS
                     ACAALLMLNVNPLVATAVGGLAGSGAGIITGLLCTRLRINASLAGVLVSTGFYSITLV
                     ILGGGTLSLADASSVMTGAGKLGEMLGLPALFDLMGTTVTAEGVVTVFVMAA"
     gene            complement(468..1715)
                     /locus_tag="VLD58_14130"
     CDS             complement(468..1715)
                     /locus_tag="VLD58_14130"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HSB55493.1"
                     /translation="MKISAVRGGGSALVTLEGRLDREWAEQLSGTLERLVQQGVRSLR
                     LDFSQVTYISSAGMQVLGRWHLELASLRGEVRMESIPAAVQQAFDSAGWRPPERGGTG
                     GQVLTPHEHRKSSWHSQSDLSACGSYEHATINPEGKLTCRLHGNPDRLTAQGIGPADV
                     STVAFPEGAFGLGLGAIGKTWEDASSRIGELIAVNGSIAVFPTDGARTPDYFAQGEQH
                     GAPPEAVFATGLSCTGSFSHLVRFSPRPDAEAIPLSELASVALDATGGRMAGVVIAAE
                     CAGATGVRIRRSPGAGKALSYDLPAVRDWLLFSPDRIHVTTTAIVAGVVARSPKGPLA
                     AHLRPLAPTGRLMGHLHAAVFSYHPLPQRTVELTALLGTLFGTRNLRDVLHLLSDDRS
                     DSGVPESEFMRGVAWAGPIHEVV"
     gene            complement(1896..2690)
                     /locus_tag="VLD58_14135"
     CDS             complement(1896..2690)
                     /locus_tag="VLD58_14135"
                     /inference="COORDINATES: protein motif:HMM:NF014336.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S1/P1 nuclease"
                     /protein_id="HSB55494.1"
                     /translation="MLLGLTLIGLAFAPAAPQSGNAVWFSEAHRLVARIAEARLTPAA
                     REAIRRILGQETLTQAASWADQVRGHRRATAPLHYVNIPLGASSYDSAAYCPSGRCVI
                     GAIDRYRSALVAPATPPVERAEALRFLVHFMGDLHQPLHVSDNSDRGGNLTKVEFAGV
                     GTTDLHKVWDGQLMEAVYPTEEAHWSRLRQMMETLDLDGMTHGTVIDWAMEGHALARE
                     AYDFPPNRRLRQAYIQKNIRVVDLALIKAGVRLAGLLNEAFARDQR"
BASE COUNT          464 a          937 c          934 g          409 t
ORIGIN      
        1 gcgccgccat gacgaacacc gtgacgaccc cttccgccgt caccgtcgtg cccatcagat
       61 cgaacagtgc ggggagacca agcatctcgc ccagcttgcc cgctccggtc atcacgctcg
      121 atgcgtcggc cagggacagc gtgccgccgc ccaggatcac cagggtgatc gagtagaaac
      181 cggtgctcac cagtactccg gcgagcgagg cgttgatgcg gagccgggtg cagaggaggc
      241 cggtgatgat cccggcaccc gagccggcca ggccgcccac ggcagtggcc acgagcgggt
      301 tcacgttcag catcagcagg gcagcgcagg ccgaggcgcc cagggcgaac gccccgtcga
      361 cggtcaggtc gagaatcgcg tagatccgcc agctgaggta gagccccagc gccagcgccg
      421 tgaagaggaa accttccgcc agggccccaa gcagcaggtt catcgtctca caccacttcg
      481 tgaatcgggc cggcccacgc caccccgcgc atgaactcgc tctcgggcac gccgctgtcg
      541 ctccggtcgt ccgagagcag gtgcagcaca tcgcgcaggt tccgggtgcc gaagagcgtc
      601 cccagcaacg cggtgagctc gacggtgcgc tgcggcaggg gatggtagga gaacaccgcg
      661 gcgtggaggt ggcccatcag ccggccggta ggcgccagcg gccggagatg cgcggccagc
      721 ggccccttgg gtgagcgcgc caccacgccg gccacgatcg cggtcgtggt gacgtggatg
      781 cggtcgggtg agaagaggag ccagtcccgc accgccggaa ggtcgtagct cagtgccttg
      841 cccgcacccg gcgatcggcg gatccgtacc ccggtggctc cggcgcactc ggccgcgatc
      901 acgacacccg ccatccttcc gccggtcgca tcgagcgcga ccgaggccag ctccgaaagc
      961 gggatcgcct cggcatcggg ccggggcgag aagcgcacca ggtgggaaaa gctcccggtg
     1021 caggagaggc cggtggcaaa aaccgcctcc ggcggtgcgc catgctgctc tccctgcgcg
     1081 aagtagtcag gcgtccgggc gccatcggtg gggaacacgg caatgctgcc gttgaccgcg
     1141 atgagctcgc cgatcctgga agaggcatcc tcccaggtct ttccgatggc gccgaggccg
     1201 agcccgaagg cgccctcggg gaatgcaacc gtggagacgt ccgcggggcc aatcccctgg
     1261 gcggtcagcc ggtcgggatt gccgtgaagc ctgcaggtga gcttgccctc ggggttgatc
     1321 gtggcatgct cgtaggaccc acaggcgctg agatcggatt gagagtgcca ggatgacttg
     1381 cgatgctcgt gcggggtgag gacctggcca ccggtgccgc cccgttccgg aggcctccac
     1441 cccgcggaat cgaaggcctg ttgcaccgcg gcgggaatcg attccatcct gacctcaccc
     1501 cggagactgg ccagttccag gtgccatcgt ccgaggacct gcatcccggc ggaggagatg
     1561 taggtgacct gcgagaaatc cagccggagc gaccggacac cctgctgcac cagccgctcc
     1621 agcgtgcccg agagctgctc ggcccactcc cggtccagcc ggccttcgag cgtgacgagc
     1681 gccgaaccgc ccccgcgaac ggcgctgatc ttcaccgcga ttcttccagg tgcgcgggaa
     1741 tctccatcag gctcggcacg cgaagacggc ggtgtccggt catctgtggt ctccacggtg
     1801 ggctggcggg gcgaatatag cacccgccga cccgcctgcc actacgactc ggcttctcca
     1861 ggatggcgat ctgctcccgc aactcgatca ggcgctcagc gctgatcgcg ggcaaaggcc
     1921 tcgttgagca ggcccgccag ccgcaccccg gccttgatca gcgccaggtc caccacccgg
     1981 atgttcttct ggatgtatgc ctgacgcagc cgccggttgg gcggaaagtc gtacgcctcc
     2041 cgggcgagtg cgtgaccttc catggcccag tcgatcaccg tgccgtgtgt catcccgtcg
     2101 agatcgagcg tttccatcat ctgccgaagg cggctccaat gggcctcctc cgtggggtag
     2161 accgcctcca tcagctggcc gtcccatacc ttgtgcaggt cggttgtacc gactccggcg
     2221 aattcgacct tcgtaagatt gccaccccgg tcactgttgt ccgatacgtg cagcggttga
     2281 tgcaggtcgc ccatgaagtg caccaggaac cgcagcgcct cggcccgttc caccggcggc
     2341 gtggcagggg cgaccagggc tgaacggtaa cggtcgatgg ccccgatgac gcaccgccca
     2401 gaggggcagt atgccgcgga gtcgtacgac gaagcaccga gcgggatgtt cacgtagtgg
     2461 agcggcgcgg tggcccggcg gtgcccccta acctggtcgg cccaggaagc ggcctgtgtc
     2521 agcgtctcct ggcccaggat ccgccgtatc gcctcgcgcg cggcgggtgt gagacgcgcc
     2581 tccgcgatcc gcgcgaccag gcgatgggcc tcgctgaacc atacggcatt gcccgactgt
     2641 ggcgcggccg gcgcaaaggc gagcccgatc agggtgagtc cgagcagcat gcgattccga
     2701 ggtgtcgagt gcccgaagtg taattgagaa ttgtccaccg aaca
//
LOCUS       DATIFF010000969         1506 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_887748, whole genome shotgun sequence.
ACCESSION   DATIFF010000969 DATIFF010000000
VERSION     DATIFF010000969.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_887748"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(57..1367)
                     /locus_tag="VLD58_14140"
     CDS             complement(57..1367)
                     /locus_tag="VLD58_14140"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB55495.1"
                     /translation="MPSHPRRVLVVALLTAAPAVAIAMLVLWRGDFSQKVQWTATLFV
                     VGGLIIGLATLHERVVRPLQTLSNVLAALREGDYSLRARGATAEDSLGLVYLEANALA
                     DTLRGQRLGALEATTLLRAVMAEIDAAVFAFDNDGSLRLVNRGGERLLGQPSERLLGR
                     SAETLGLAECLEGDTPRVLERGGTSASRWELRRSAFRQDGRPHQLVLLTDVSRTLQAE
                     ERQAWQRLIRVLSHEINNSLAPIRSLAGSLRNILDRGGPDARTDLAEGLGIIGQRADS
                     LGRFLAAYARLARLPRPTRRPMPVGPWVRRVAALETRTAVHVVPGPDLTLEADGDQLD
                     QLLINLIRNATDAVADTQGGVSVTWRTQGDGIEVVVEDEGPGIVDTANLFVPFYTTKP
                     GGSGVGLALSRQIAEGHGGRLRLENRKEVKGCRAVLWLPLEGGE"
BASE COUNT          224 a          551 c          493 g          238 t
ORIGIN      
        1 attgcgcccc cttcttactt ctcacttctc acttctcact tctcccttct cccttctcac
       61 tctcccccct ccaacggcaa ccagagcacc gcgcggcacc ccttcacctc tttccggttc
      121 tccagccgca gccgtccccc atgcccctcc gcgatctggc gcgaaagggc aagcccgacg
      181 cctgatccgc ccggcttggt ggtgtagaac ggcacgaaca ggttggcagt gtccacgatg
      241 cccggccctt cgtcttcgac caccacctcg ataccgtccc cctgcgtccg ccaggtgaca
      301 ctgactccac cctgagtgtc cgccaccgcg tcggtcgcgt tccggatcag gttgatcagc
      361 agctgatcga gctggtctcc atcggcctcg agcgtgagat cgggacccgg cacgacgtgc
      421 accgcggtgc gggtctcgag ggccgcgacc cggcggaccc acggcccgac cggcatcggg
      481 cgccgagtcg ggcgcggaag gcgggcgagc cgggcatagg ccgcgaggaa gcggcccagg
      541 gaatcggccc gttgaccgat gatgccgagc ccttcggcaa ggtcggtcct ggcgtcgggg
      601 ccgccgcggt cgaggatgtt cctgagactc ccggccagcg agcggatcgg ggccagcgag
      661 ttgttgatct cgtgcgagag cacccggatg agccgctgcc atgcctgccg ctcttccgcc
      721 tggagggtac ggctcacgtc ggtcagcagc accagctggt gaggccgccc atcctggcgg
      781 aacgcgctcc gccggagttc ccagcggctc gccgacgttc ccccgcgttc cagcacccgc
      841 ggcgtatcgc cctcgaggca ctcggcgagc ccgagggtct cggcgctccg gccgagcagc
      901 cgctcggagg gttgccccag caaccgttcg ccgccgcgat tcaccagccg gagcgagccg
      961 tcgttgtcga aggcgaagac cgcggcatcg atctccgcca ttaccgcccg gagcagggtc
     1021 gtcgcttcga gcgctccgag gcgctggccc cgcagggtat cggcgagggc gttggcttcg
     1081 agatacacca ggccgagcga gtcctcggcg gtcgcgcccc tggcccgaag ggaatagtcc
     1141 ccttcgcgaa gggcggcgag cacgttggag agagtctgca gcggtcggac cacccgttca
     1201 tggagggtgg caagcccgat gatgagtccc cccaccacga acagcgtcgc ggtccactgg
     1261 accttctggg agaagtcgcc ccgccagagc accagcatcg caatggcgac tgccggcgct
     1321 gcggtgagca gtgccacgac caggacgcgg cgaggatggg agggcacttg ggaggggcta
     1381 gagcccgtag cgttcgagcc ggcggtacat ggcgctccgg ctcaggccca gcgccttcgc
     1441 cgcttcggtc acgttgccgc cggcgcgggc cagcgacttc tggaccagga ccttctccac
     1501 ttcctc
//
LOCUS       DATIFF010000970         1211 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1199113, whole genome shotgun sequence.
ACCESSION   DATIFF010000970 DATIFF010000000
VERSION     DATIFF010000970.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1211
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1199113"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..735
                     /locus_tag="VLD58_14145"
     CDS             <1..735
                     /locus_tag="VLD58_14145"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HSB55496.1"
                     /translation="VVIRALPETVFRYFIDSDRFAAWWGAGSSIEPRAGGLVRIRYPN
                     GAIAIGEILEIQPPWRVSFTYGYLDQPMVPPGGSRVTFTLEPHAEGTLLSLRHDFAES
                     VARDEHRQGWGYQLALFANVVATEAYQDAPDTIDRYFAAWNEADGPRRSKELAALAAP
                     GVVFRDRFGATAGSEELAGHIGAVRVHMPGLRLERDGDIRHCQGTALAEWVAVGPDGS
                     TRARGTSVFDFAPDGRIARVVGLWNG"
     gene            810..>1211
                     /locus_tag="VLD58_14150"
     CDS             810..>1211
                     /locus_tag="VLD58_14150"
                     /inference="COORDINATES: protein motif:HMM:NF016311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase N-terminal domain-containing
                     protein"
                     /protein_id="HSB55497.1"
                     /translation="MPRCREALEARIASATTFAAWAAARRSGGPCILLHAASAGELRQ
                     AEPLIRRFRTSHPEWHLAVTYTSRSAVAVATDLPLDVHGFLPWDTPTSTSALLEALRP
                     ALMVVSKLDLWPELAHQAVRRGVPVVLVGAMV"
BASE COUNT          172 a          425 c          424 g          190 t
ORIGIN      
        1 gtggtcatcc gggcactgcc ggagacggtg ttccggtact tcatcgattc ggaccgcttt
       61 gccgcatggt ggggagccgg atcttccatt gaaccgcgcg ccggcgggtt ggtccgtatt
      121 cgctacccca acggcgcgat cgcaatcggt gagatcctgg agatccagcc cccatggcgg
      181 gtcagtttca cctacggcta cctggaccag ccgatggtgc cccctggcgg atcccgggtc
      241 acctttacgc tggagccgca cgccgaggga accctgctga gcctccggca cgactttgct
      301 gaatccgtcg ctcgggacga acatcggcaa ggctggggat accagctggc gctgtttgcc
      361 aacgtggtcg caaccgaggc gtaccaggac gccccggaca cgatcgatcg ctatttcgcg
      421 gcctggaacg aggcggacgg cccgcgccgg tcaaaggagc tcgcggcgct cgcggcacct
      481 ggcgtggtgt tccgggaccg cttcggcgcg accgccggat ccgaggagct ggcgggccac
      541 ataggggcgg tccgggtgca catgcctggc ctgcggttgg aacgggacgg ggacatccgc
      601 cactgccagg gaaccgccct ggcggagtgg gtcgccgtgg gcccggacgg cagcacgagg
      661 gcccggggga ccagcgtctt cgactttgca ccggacggac gcatcgccag ggtggtcggg
      721 ctctggaacg gctgacctcg gcacccccgg agccataccg tctggcgctc gaggcggggc
      781 acatcctggc ccgggctctc gccccgttcg tgccccgatg ccgcgaggcg ctggaagcgc
      841 ggatcgcgag cgccaccacc ttcgctgctt gggccgcggc ccggcggtcg gggggcccct
      901 gcatcctcct gcatgccgcg tccgccggtg aactccgcca ggcggagccg ctgatccgcc
      961 gattcaggac cagccatccc gaatggcacc tcgccgtcac ctataccagc cgatccgcag
     1021 tggccgtagc caccgacctg ccactcgacg tgcacggctt cctcccctgg gacacgccga
     1081 ccagcacgag cgcgctgctc gaggcgctgc ggcccgccct gatggtggtg agcaagctcg
     1141 atctctggcc ggagctcgcc catcaggccg tgcgccgcgg cgtgccggtc gttctggtgg
     1201 gggcgatggt a
//
LOCUS       DATIFF010000971         1252 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_736440, whole genome shotgun sequence.
ACCESSION   DATIFF010000971 DATIFF010000000
VERSION     DATIFF010000971.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_736440"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1252
                     /locus_tag="VLD58_14155"
     CDS             <1..>1252
                     /locus_tag="VLD58_14155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55498.1"
                     /translation="IFTTPSASYRVAANGGEATALPGLSTALTFPLPDGSGMLYSRNG
                     QIALYDFKSDSSVVLLPGRTPVYVPSGHILYVGSDGGLYAVKFDLAKRKVTSAPVRVL
                     EQVGGSIISRGYAVSAAGVLVQYDAPGSQNLGGTNRLVIVDPGKGADTVRIPPGRRAF
                     PRFSRDGRSLAMEVVADGRNGSTDIYTLDLVTGTYTQLTFDGDNDEPVWSPDGKRILF
                     DKRVGTNPSGEDLFIKPADNSGPERRITTMLSPEIGAQQWIDDKTLLFDAIVPGRAAD
                     VFTVSADSGSVPVPYLQSPFAEQLPQLSPDRKLLAFNSDESGVDQVWMRDFPVPQGKW
                     NLSRGQGRASRWSPDGRFVYFWRGGTPLDSLFRVRIDRTPAIVVHAPELVVAMDAAGT
                     ANWDLHPDGRRFVVAVADIAPVATA"
BASE COUNT          191 a          428 c          431 g          202 t
ORIGIN      
        1 catcttcacc acgccctcgg cctcgtatcg cgtcgcggcg aacggcggcg aggccacggc
       61 gctgccgggg ctgtccaccg ccctcacctt cccgttgccc gacggcagcg ggatgctgta
      121 cagccggaac ggccagatcg cactgtacga cttcaagagc gactcctcgg tggtgctcct
      181 tcccggcagg acaccggtct atgtgccatc aggacacatc ctctatgtcg ggagcgatgg
      241 cgggctctac gcggtcaagt tcgatctcgc gaagcgcaag gtgaccagcg ctccggtacg
      301 cgtgctggag caggtgggag gatcgatcat cagccggggg tatgccgtgt cggccgccgg
      361 cgtgctggtc cagtacgatg cgccgggctc gcagaacctg ggggggacga atcggctggt
      421 gatcgtggat cccggcaagg gcgccgacac cgtgcgcatt cccccgggcc ggcgggcctt
      481 cccgcgattc tcccgcgacg gccgttcgct cgccatggag gtcgtcgccg atgggcggaa
      541 cggctcgacc gacatctaca ccctcgatct ggtcaccggg acctacaccc agctgacctt
      601 cgacggggac aatgacgagc cggtctggtc accggacggc aagcgcatcc tcttcgacaa
      661 gcgggtgggg accaatccat cgggcgagga cctgttcatc aagccggccg acaacagcgg
      721 ccccgagcgg cggatcacga ccatgctttc gccggaaatc ggggcccagc agtggatcga
      781 cgacaagacg ctcctgtttg acgcgatcgt tccggggcgg gccgccgacg tgttcaccgt
      841 ctcggcggac tcgggcagcg tgccggttcc ctatctccag tcgccctttg cggagcagct
      901 gccgcagctc tcgcccgacc gcaagctgct cgccttcaac tcggatgaga gcggcgtcga
      961 ccaggtctgg atgcgggact tcccggtgcc gcaggggaaa tggaacctct cccgcgggca
     1021 gggaagggcg tcgcggtggt cgccggacgg ccggttcgtg tacttctggc gcggcgggac
     1081 cccgctcgat agcctcttcc gggtccggat cgaccgcacc ccggcgatcg tggtgcacgc
     1141 cccggagctg gtggtcgcga tggacgccgc cgggacggca aactgggacc tccatcccga
     1201 tgggcggcgc ttcgtcgtcg cggtggcaga catcgcgccg gtcgcgaccg cg
//
LOCUS       DATIFF010000972         2987 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1506444, whole genome shotgun sequence.
ACCESSION   DATIFF010000972 DATIFF010000000
VERSION     DATIFF010000972.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2987
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1506444"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(203..793)
                     /locus_tag="VLD58_14160"
     CDS             complement(203..793)
                     /locus_tag="VLD58_14160"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HSB55499.1"
                     /translation="MTDYFVHQSSYVDDGATIGAGSKIWHFCHVMPGAVIGERCNLGQ
                     NVVVMGGTRLGNNVKVQNNVSIYEGVTLEDDVFCGPSCVFTNVTNPRSHVSRKHEFRS
                     TLVRRGASLGANSTVVCGVTIGQYALIGAGAVVTSNVPAFGLMVGVPARRVGWICQCG
                     ERLHLSQGAGKCGSCGASYREEGGELRMIDPPGPGR"
     gene            complement(815..2125)
                     /locus_tag="VLD58_14165"
     CDS             complement(815..2125)
                     /locus_tag="VLD58_14165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55500.1"
                     /translation="MTLRIISFRTATLALSLAATPLVLSAQAADSSAAARAHYRAAVT
                     SLRGGDTAAALTALGKAAEAWPAQGFYHAARAELAAAAGRTDVALAALGKLIAIGWSW
                     APGDPGLRPLAGNAAYARLEQEMLRATGPLLRSTVLASLPDSLLHPEGIAWDGARRRW
                     LVSSVRQRKVVAIDARGSTVDLVRSGQDGLDAALALGVDSARGLLWVASAALPQMTGY
                     TPADAGRSRIFAFDLATGSLRRRIELPGNQGGHSVGDLTVALDGTVYASDNRSAAIYR
                     IDPAGGDTARMILSSTSGLRSPQGIVPDGHRLLVADYSLGISAVDLATGAVTTLTPPA
                     EGTVLGIDGLVRLDARRLIGVQNGTTPARVVRLTLTDDGAGVARVETLDRHLPEASEP
                     TLGVLTGGAFVYVANSPWSNYDGDDAVRADAHWPSPVLLRLPIR"
     gene            complement(2166..>2987)
                     /gene="murB"
                     /locus_tag="VLD58_14170"
     CDS             complement(2166..>2987)
                     /gene="murB"
                     /locus_tag="VLD58_14170"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: protein motif:HMM:NF010480.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HSB55501.1"
                     /translation="DVAAALHHAASHGVPWFALGLGSNLLLPDEGMEALVIRLGKGLD
                     RLEHLGGGRWRVGAGLPQPLAARKTSEAGFSGLHRFVGVPGTVGGGVYMNAGCHGGDW
                     AGVVEAVTVVDATGKDTVIARADVPFEYRHSGLEGRVVLETAVQLSATEPAVIQAEVA
                     ELFRWRQEGTPFNQPCCGSVFKNPGGPSWKRTEGPRTAGQLIEAAGLKGTRVGGAEVS
                     PMHANYFVNTGSATAADVRGLIALARKRVQDQFGAELETEVKIVRPDGSFEPSVV"
BASE COUNT          489 a         1043 c         1018 g          437 t
ORIGIN      
        1 ctcttcaccc aggatgaact gctgcctgtc agcgagccgg aggatggcct gaaggacttc
       61 gtctttgatc gactggtact ggctgacgag atcgagcaga ggaacgttca ctgcagcctt
      121 tgggggctcg aggtggggtg cggctggtcc ctatccgcgc gaccggcccg gtcgtgttcc
      181 cgggccagtc ggaggtaaga acctagcgac ccggccccgg ggggtcaatc atcctaagtt
      241 cgcccccctc ttcgcgatag gacgccccgc aggagccgca tttcccggcg ccctgggaca
      301 gatgcaggcg ttccccgcac tggcagatcc agccgacccg gcgggccggg actcccacca
      361 tcagaccgaa cgccgggacg ttgctggtga ccactgcccc ggcaccgatc agggcgtact
      421 ggccgatggt cacgccgcag accacggtcg agttggcccc gagcgacgcg ccccgccgga
      481 ccagcgtaga acggaactcg tgcttgcggg agacatgact gcggggattg gtgacgttgg
      541 tgaagacgca gctcggtccg cagaagacgt cgtcctccag cgtgacccct tcgtagatcg
      601 agacgttgtt ctggaccttc acgttgttgc cgagccgggt gccacccatc accacgacgt
      661 tctgccccag gttgcagcgc tccccgatga cggcgccggg catcacgtgg cagaaatgcc
      721 agatcttgct gccggcgccg atagtggcgc cgtcgtcgac gtagctcgac tggtgcacga
      781 agtagtcagt catgggccca aagataagcc gggcctagcg aataggcagt cgaagcagaa
      841 cgggggaagg ccagtgcgcg tcggcgcgaa cggcgtcgtc gccgtcgtag ttgctccagg
      901 ggctgttggc gacgtacacg aaggcgccgc cggtcagcac acccagggtg ggctccgacg
      961 cttcggggag atggcgatcc agcgtctcga cccgggccac gccggcgccg tcgtcggtca
     1021 aggtgagccg cacaaccctc gcgggcgtgg tgccgttctg cactccgatg agccgacggg
     1081 catccagccg caccagcccg tcgatcccga gcaccgtgcc ctcggcggga ggagtaaggg
     1141 tcgtgaccgc gccggtggcg aggtctaccg ccgagatgcc gagggagtag tcggcaacga
     1201 gcaggcgatg gccatcgggc acgatgccct gcggactccg aagcccactc gtgctggaga
     1261 gaatcatgcg ggccgtatcg ccgcccgcgg gatcgatccg gtagatcgcg gcggagcgat
     1321 tgtcgctggc gtagacggta ccgtcgagcg ccacggtaag gtcacccacg ctgtggccgc
     1381 cctgattgcc cggcagctcg atgcggcggc gaagcgatcc agtagcgagg tcgaacgcga
     1441 agatccggga gcggcccgca tcggcggggg tgtagcccgt catctgcggc agcgccgcgc
     1501 tcgccaccca gagaaggccg cgcgccgaat ccactccgag cgccagggcg gcatccagtc
     1561 catcctgtcc actccggacc aggtccaccg tactccctcg cgcgtcgatc gccacgacct
     1621 tccgctgccg cacgctcgat accagccacc gccgtcgggc tccgtcccag gcgatgcctt
     1681 ccggatggag cagcgagtcg ggcagcgaag cgagaacggt gctcctgagg agcggcccgg
     1741 tcgcccggag catctcctgc tcgagccggg catacgcggc attgccggcg agcggccgca
     1801 ggccggggtc tccgggagcc catgaccagc cgatggcaat gagctttccg agcgccgcca
     1861 gcgccacgtc ggtgcggccc gctgccgcag ccagctcggc ccgcgccgcg tggtagaacc
     1921 cctgggccgg ccacgcttcg gcggccttgc cgagcgccgt cagggcggcg gcggtgtcgc
     1981 ctccacggag ggaagtgacg gcggcccggt agtgagcccg ggcggcggcg gaggaatcgg
     2041 cggcttgagc ggagaggacc agcggcgtgg cggcgaggct cagggcgagc gtcgccgttc
     2101 gaaacgagat gattcgcaag gtcattccaa ccctacggcg ggaaaagcgg agaagtgacg
     2161 ggccctcaca ccaccgaggg ctcgaagctg ccatccggcc gcacgatttt cacttccgtc
     2221 tcgagctcgg cgccgaactg gtcctgcacc cgtttccgag cgagggcgat caggcccctc
     2281 acatcggcag ccgtcgcgct accggtgttc acgaagtagt tggcgtgcat cggggagacc
     2341 tcagccccgc cgaccctggt gcccttgagg ccggccgctt cgatcagctg gcccgcggtg
     2401 cgcggccctt cggtccgctt ccagctgggg ccgcccgggt tcttgaagac gctgccacag
     2461 catggctggt tgaacggggt cccctcctgg cgccagcgga agagttctgc aacctccgcc
     2521 tgaatcaccg cgggctcggt ggcgctgagc tggacggcag tctccagcac cacccgtccc
     2581 tcgagcccgc tgtgacggta ttcgaacggc acgtcggccc gcgcgatcac ggtgtccttc
     2641 ccggtggcat ccaccacggt gaccgcctct accacgccgg cccagtctcc accgtgacag
     2701 ccggcattca tgtagacccc gccgcctaca gtgcccggca cgccgacgaa acgatgcaac
     2761 ccggagaacc ccgcctccga cgttttccga gccgcgagcg gctgcggcag tcccgccccg
     2821 acgcgccagc gcccgccacc gagatgctcc agccgatcga gccccttccc cagccggatg
     2881 acaagagcct ccatcccctc gtccggcaac agcaggttgg agccgagacc gagggcgaac
     2941 cagggcacgc cgtggctggc ggcatggtgc agcgcagcgg cgacgtc
//
LOCUS       DATIFF010000973         5126 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1351962, whole genome shotgun sequence.
ACCESSION   DATIFF010000973 DATIFF010000000
VERSION     DATIFF010000973.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5126
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1351962"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            162..1538
                     /locus_tag="VLD58_14175"
     CDS             162..1538
                     /locus_tag="VLD58_14175"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSB55502.1"
                     /translation="MSSTIPLTVAVIGTGPSGFYAAEHLLKQHPGVQIDLFDRLPTPY
                     GLVRGGVAPDHQKIKSVTRVYEKIAANPAVRFFGHVVFGADISREELLRHYHAVIYAV
                     GAPTDRSLGIPGEELEGSHPATDFVGWYNGHPHYREQHFDLDGPSVVVIGMGNVAVDV
                     VRILARTPEELRATDIAEHALEALSRSRVRDIYMIGRRGPVQGAFTNPELKELGEMVG
                     ADIDVRAADLELDPGSAAVLASTDDKTVEKNINTLRHFTELQPSGKGKTIHLRFLLSP
                     VELQGRSRVEQVVLGHNQLVPGSGGDLKAVPAGTTETLATHLVFRSVGYHGVALPGVA
                     FDGKRGVIPNQAGRVLREPGQPAVGEYVVGWIKRGPSGVIGTNKPDAVESTDALLADF
                     NAGQLLDPEVTGRDAIPALLAQRKVRVISWQDWLKLDALEKSRGEAIGRPRLKFTRLD
                     EMLAAVGK"
     gene            1681..2778
                     /locus_tag="VLD58_14180"
     CDS             1681..2778
                     /locus_tag="VLD58_14180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55503.1"
                     /translation="MRLTTRSPLAALGLLLGCAQIGQFLNTPERPPLPLVEAGISSDA
                     RIDSTGAIAGSFVGEGTSRQVHLLSSDPEFIAQLVRRWRPERDRRLDPLDWLERKGSF
                     AVNPDRVADSALFSEVMLVGSPDGHTRVRLQSVLLYGSSCRQGGPRAELVVESSRNVQ
                     ISLRGPVVGSLRSADVYWPVQDSYRRDPPPDPAPELVDTLVERTGLVLDSILALRLSP
                     RDLPLEGGYHRLAINSLANEDAADVVPIRLDDGRIRYAVSLRDTRRTARGAAGLGSIV
                     MIWDATLSWRQIVFLPTFLEYGRRAPVRALGGRTAPLYWRRLQPVSGFAFQRDYLWME
                     QVDVESGTVRWVILEPKGNIIVAAADVEDGC"
     gene            2772..3296
                     /locus_tag="VLD58_14185"
     CDS             2772..3296
                     /locus_tag="VLD58_14185"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB55504.1"
                     /translation="MLKLSTERLELIPFTADAIDALLAGDETRLRRETGFTFPTPLRP
                     PPLLEDVLPLVRTHLRQEPNTLGWWTWLTVDKATGQVTGASGFGGPPDPDGAVMIGYA
                     TYPGANRKGFASEAAEALVEWALTQPGVQRVCASIPPDNIAARRVAEKIGMRVAGTVW
                     EEEIDDVLLYERGR"
     gene            3384..3929
                     /locus_tag="VLD58_14190"
     CDS             3384..3929
                     /locus_tag="VLD58_14190"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HSB55505.1"
                     /translation="MKIYTKTGDAGETGLFGGGRVAKDHPRVQAYGEVDELNSALGMV
                     RATQPVHFMDQLLEGIQRDLFALGGHLATPDPGKVKEALEKADLSESRIAVFEKVMDE
                     ADLELPPLRAFVLPAGTPKAAALHLARTICRRAERSVVRLSHEETVPDLFLVYLNRLS
                     DLLFTLARLANHRDGAGDVTW"
     gene            3945..5027
                     /gene="aroB"
                     /locus_tag="VLD58_14195"
     CDS             3945..5027
                     /gene="aroB"
                     /locus_tag="VLD58_14195"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HSB55506.1"
                     /translation="MAVILVRHAAGSYPVHVEPGILGSLSELLGRVLGHRRLAFISDD
                     TVASLRSQWKAAVPENALFTFPAGEASKTRKTWSRLSDALLAAGYDRQSAIVALGGGV
                     VGDLAGFVAATLLRGVPYAQVPTTLLAMLDASVGGKVGVDTALGKNLIGAFHPPAIVL
                     ADPLTLLTLPDRVFRAGLAEAVKHGVIADAAYFDWIEQEAPRLIARDLEALTRLVTRS
                     VEIKAQVVSEDEREGGRRAILNAGHTIAHGLEQESHYQLPHGEAVGLGLIAECRIAER
                     MGLVADGLSARIERVLAALGLPIRVTAPPVMARVLEAMLHDKKNRDGAIRLALPTGLG
                     QMHEGEGRYTVPVTQDLLASAVSGLA"
BASE COUNT          835 a         1733 c         1750 g          808 t
ORIGIN      
        1 acgccatggc gatcgacttc gccaaatccg cggttctcgg cctcgaactc gatgcgctcg
       61 aagcagggag tgcggaactc tcatttttcc tgaggcccaa gggcgattga ggccgctggg
      121 cagctgcctg tgcccacccg gccgctgtat cttccgcccc catgtcctcc acaattccgc
      181 tcaccgtcgc cgtcatcggg accggtccgt ccggtttcta cgccgccgag cacctgctca
      241 agcagcatcc cggcgtgcag atcgatctct tcgaccgcct gcccacgccc tacgggctgg
      301 tgcgcggcgg ggtcgcgccc gatcaccaga agatcaaatc ggtcacccgg gtctacgaga
      361 agatcgccgc caatccggcg gtgcggttct tcggccacgt ggtcttcggc gccgacatct
      421 cgcgcgaaga actgctgcgc cactaccacg cggtgatcta cgccgtcggc gctcctaccg
      481 accggagcct cggcattccc ggcgaagagc tggaggggag ccatccggcc accgacttcg
      541 tcggctggta caatggtcac ccccactacc gcgaacagca tttcgacctc gacggtccga
      601 gtgtggtggt gatcggcatg gggaacgtgg cggtggacgt ggtgcggatc ctggcccgca
      661 cgccggagga gcttcgcgcc accgatatcg ccgagcatgc cctcgaggcg ctgagccgga
      721 gcagggtccg cgacatctac atgatcgggc ggcgcgggcc ggtgcagggc gccttcacca
      781 accccgagct caaggagctg ggcgagatgg tgggcgccga catcgacgtg cgcgccgccg
      841 atctcgagct tgatcccggc agcgccgcgg tgctggcgag caccgacgac aagaccgtcg
      901 agaagaacat caacaccctg cggcacttca cggagctcca gcctagcggc aaggggaaga
      961 cgattcacct gcgcttcctg ctctcgccgg tggaactcca gggcaggtcg cgggtcgagc
     1021 aggtggtgct ggggcacaac cagctggtgc cggggagcgg tggcgacctg aaggcggtgc
     1081 cggccggcac gacggagacg ctggccacgc acctcgtctt ccgctcggtc ggctatcacg
     1141 gcgtggccct tcccggcgtg gcgttcgacg gcaaacgggg cgtgattccc aatcaggcgg
     1201 ggcgagtgct gcgcgaaccg ggacagcccg ccgtgggtga gtacgtggtg ggatggatca
     1261 agcggggacc gagcggagtg atcggtacca acaagcccga cgcggtggag agcaccgatg
     1321 cgctgctcgc cgatttcaac gccggccagc tgctcgatcc cgaggtgacg ggccgtgacg
     1381 cgattcccgc gctgctggcc cagcgcaagg tgcgggtgat ctcctggcag gactggctca
     1441 agctcgacgc gctcgagaaa tcccggggcg aagcgatcgg ccggccgcgg ctcaagttca
     1501 cccggctcga tgagatgctg gccgcggtgg ggaagtgaga agtgagaagg gagaagggag
     1561 aagggagaag taagaagtaa gaagtaagaa gtaagaaggg agaagggaga agtaaggagt
     1621 aaggagtgag gagtggggag gcagatgagg cgaccgcaat cacagattcg ggaggcaagg
     1681 atgcgtctga caacccgctc gccgctcgcc gccctcggcc tcctgctcgg ctgcgcccag
     1741 atcgggcagt tcctcaacac tcccgagcgg ccaccgctgc cactggtcga ggccgggatc
     1801 tcgagtgacg cccggatcga cagcaccgga gccatcgcgg gcagcttcgt gggtgagggt
     1861 accagccgcc aggtccacct gctctcgagc gaccccgagt tcatcgccca gctggtgcgc
     1921 cgctggcggc ccgagcggga ccggcgcctc gaccccctcg actggctcga gcggaaaggc
     1981 agcttcgcgg tcaatcccga ccgggtggcc gattcggccc tcttctccga ggtgatgctg
     2041 gtggggtcgc ccgacgggca cacccgggtc cggctccaga gcgtgctcct ctatggctcg
     2101 agctgccggc agggtggacc gcgggccgag ctggtggtgg aatccagccg caacgtccag
     2161 atctcgctcc ggggtccggt ggtcggatcg ctccggagcg ccgacgtcta ctggccggtg
     2221 caggacagct atcgccgcga tccgccaccc gaccccgctc ccgagctggt cgataccctg
     2281 gtggagcgca ccgggctggt gctggattcg atcctggccc tccggctgtc gccgagggac
     2341 ctgccgctcg agggcgggta tcaccgcctc gcgatcaatt cactggcgaa tgaagatgcg
     2401 gccgacgtgg tccccatccg gctcgacgat ggccgcatcc gctacgcggt ctcgctgcgc
     2461 gacacccggc gcaccgcccg gggcgccgcg gggctgggct cgatcgtgat gatctgggat
     2521 gcgaccctga gctggcggca gatcgtcttc cttccaacat tcctcgagta cggccgccgc
     2581 gctccggtac gggccctcgg cggccggacc gccccgctct actggcggcg gctccagccg
     2641 gtgagcggtt tcgccttcca gcgcgactat ctctggatgg agcaggtcga cgtggagtcg
     2701 ggcacggtgc gctgggtgat tctcgagccg aagggcaaca tcatcgtggc cgcggccgat
     2761 gtggaggatg gatgctgaag ctgtccaccg agcggctgga actgattccc ttcaccgccg
     2821 acgcgatcga cgcattgctc gccggcgacg agacgcggct ccggcgggag acgggattca
     2881 ccttcccgac cccgctccgc ccacccccgc tcctcgaaga cgtgcttccg ctggtgcgca
     2941 cccacctccg acaggaaccg aacaccctcg gctggtggac ctggctcacc gtggacaagg
     3001 cgaccggcca ggtcaccggc gcgagcggct tcggcggccc acccgacccc gatggcgcgg
     3061 tgatgatcgg ctacgctacc tatcccggcg ccaaccggaa gggcttcgcg agcgaggcgg
     3121 cggaagcgct ggtggagtgg gccctgacgc agccgggggt gcagcgggtg tgcgccagca
     3181 taccgcccga caacattgcg gcgcggcggg tggcggagaa gatcgggatg cgggtcgcgg
     3241 ggacggtgtg ggaggaggag atcgatgatg tgttgttgta tgagagggga cgatgatggc
     3301 ttggggcctg aggtttgggg cttcaagccc ccggccccaa gcccctagcc tctaggccta
     3361 ccagcacact ttctttcact cccatgaaga tctacaccaa gaccggtgac gccggcgaga
     3421 ccggcctctt cggcggcggg cgcgtcgcca aggaccaccc tcgggtccag gcctacggcg
     3481 aagtcgacga gctcaactcg gcactgggca tggttcgcgc cacccagccg gtccacttca
     3541 tggaccagct gttggagggc attcagcgcg atctctttgc cctgggcggc catctcgcca
     3601 cgcctgaccc cggcaaggtc aaggaagcgc tcgagaaggc cgacctgtcg gaatcccgca
     3661 tcgcagtgtt cgagaaggtg atggacgagg ccgacctgga gctgccgcca ctgcgcgcct
     3721 tcgtgctgcc ggccggcacg cccaaggccg cggccctcca cctggcccgc accatctgcc
     3781 gccgcgccga gcgaagcgtg gtgcggctct cccacgaaga gacggtgccg gatctcttcc
     3841 tggtctatct caaccggctt tccgacctcc tcttcacgct cgcgcgcctc gccaatcatc
     3901 gcgacggggc cggcgacgtg acctggtagc gagctaccgc cagcatggcc gtcattctgg
     3961 ttcgccacgc cgccggcagc tacccggtgc acgtggagcc cggcatcctc ggctccctgt
     4021 ccgaattgct gggacgggtg ctgggccacc gccgcctcgc gttcatcagc gacgataccg
     4081 tcgcgagcct tcggagccag tggaaggccg cagtccccga gaatgccctc ttcactttcc
     4141 cggccggcga agcctccaag acccggaaga cctggagtcg cctctctgac gcgctgctcg
     4201 ccgcgggcta cgaccgccag tcggcgatcg tggcgctggg tggcggcgtg gtgggtgatc
     4261 tcgccggctt cgtcgccgcg acgctcctcc gcggcgtacc ctatgcccag gtgccgacca
     4321 ccctgttggc gatgctcgat gcatcggtgg gcgggaaggt cggggtcgac accgcgctcg
     4381 ggaagaacct catcggcgcc tttcatccgc cagccatcgt cctcgccgat ccgctcacgc
     4441 tgctcaccct gcccgaccgg gtcttccgcg ccgggctcgc cgaagcggtg aagcacgggg
     4501 tcatcgcgga cgcagcctat ttcgactgga tcgagcagga ggccccccgg ttgatcgcgc
     4561 gggacctcga ggcgctgacc cgtctcgtca cccgcagtgt cgagatcaag gcgcaggtcg
     4621 tgagcgagga tgagcgcgaa ggcggaaggc gtgcgatcct caacgccggg cacaccatcg
     4681 ctcatggcct ggagcaggaa tcacactacc agctgccgca tggcgaggcc gtggggctcg
     4741 gactcatcgc cgagtgccgg atcgccgagc ggatggggct ggtggcggac ggactctcgg
     4801 cccggattga gcgagtcctc gccgcgctgg ggctgcccat ccgggtcacc gcgccgccgg
     4861 tgatggcgcg agtgctggaa gccatgctgc acgacaagaa gaaccgtgat ggcgccatcc
     4921 gactggcgct gccgaccgga ctcggccaga tgcacgaagg cgaaggccgc tacaccgttc
     4981 cggtgacaca ggatctgctc gcctcggcgg tcagcggcct ggcctgattg tcccttcccg
     5041 gcgggttatc caccgccatt cggccccaca aactcagcta accgattatg ggagtgtgac
     5101 ttacatcaca catccagaat cttggc
//
LOCUS       DATIFF010000974         1339 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_583144, whole genome shotgun sequence.
ACCESSION   DATIFF010000974 DATIFF010000000
VERSION     DATIFF010000974.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1339
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_583144"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..413)
                     /locus_tag="VLD58_14200"
     CDS             complement(72..413)
                     /locus_tag="VLD58_14200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55507.1"
                     /translation="MTVIVRKIGPPIPPTAAPPWAARLPYPPEALAALAAAVQQAAGP
                     AGFRLTLDEGTQQWRGPGAVILNALFGRDYQPVAYAPLRAVAVAHEAAYCLGAEVIPP
                     PPEPVQPGRVY"
     gene            complement(410..>1339)
                     /locus_tag="VLD58_14205"
     CDS             complement(410..>1339)
                     /locus_tag="VLD58_14205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55508.1"
                     /translation="FRDRPAVAAAYQPVQDAAREFNRLQGLASDFAEQADAYGLANPF
                     TGDPAHDLPLGAEYERLGELAQKYANQAAQTAEYMKLKNNEYQAVRMEEALKVIGTTP
                     WTGGTFTVHPDSPWWIGLDASGERRALVEAEIRKALEEQVRRLIPEELLSTMQIDVAF
                     DPRNGRAYYNSTTAVPSVSLMADNRPTTLLHEFGHAVEDQHPAIGRASLEFLDRRTRG
                     EAAEYLAALKPSGGYDSHEMTRKDQFLDPYMGKDYGRTATEILSMGLEEMMKDPVAFA
                     EKDPEMFDYIWSTLRTTPTGEPRIGGPPVIKKE"
BASE COUNT          181 a          458 c          444 g          256 t
ORIGIN      
        1 gtctagtggt ggagaccgcc ttggcgcaag acgcggcccc ttcattccgt cttccgggcg
       61 gcttcatccg cctagtagac ccggcccggc tggacaggtt ccggtggggg tgggatcacc
      121 tccgctccca ggcagtaggc cgcttcgtgg gcgaccgcca ccgcccggag cggcgcgtag
      181 gcgaccggct gatagtcgcg cccgaatagg gcgttgagga tcacggcccc cggcccacgc
      241 cactgttgcg tgccttcgtc cagcgtgagc cggaatcctg ccgggccagc ggcctgctgc
      301 accgctgccg ccaaggcggc gagcgcctcc ggcggatagg ggagccgggc cgcccacggc
      361 ggcgcagcgg tcgggggaat cggcggcccg atcttcctga cgatgacggt cattctttct
      421 tgatgaccgg cgggccgccg atgcgcggtt ccccggtcgg tgtggtgcga agcgtgctcc
      481 aaatgtagtc gaacatctcc gggtctttct ccgcgaacgc gaccgggtct ttcatcattt
      541 cctccagccc catgctgagg atttcggtcg ccgtccgccc gtagtccttg cccatgtagg
      601 gatcaaggaa ctggtccttg cgcgtcatct catgcgaatc atagcccccg ctcggcttca
      661 gcgcggcgag gtactccgcc gcctcccccc gcgtccgccg gtcgaggaac tccaacgatg
      721 cccgcccgat ggcggggtgt tgatcctcga ccgcgtggcc gaactcatgg aggagcgtgg
      781 tcggtcggtt gtcggccatc agcgagaccg aggggacggc ggtcgtggag ttgtagtagg
      841 ctcgcccgtt gcgcgggtcg aaggcgacat ctatctgcat cgtactgagt agttcctcgg
      901 ggatcagccg ccggacttgt tcctccagcg ccttcctgat ttccgcctcc actaacgccc
      961 ggcgttcgcc cgaagcatcg agcccgatcc accagggtga gtcggggtgg accgtgaacg
     1021 tgccgccggt ccacggggtc gtgccgatca ccttcaacgc ttcctccatg cggaccgcct
     1081 ggtactcgtt gttcttcagc ttcatatact ccgctgtctg cgcggcctgg ttcgcgtatt
     1141 tctgcgccag ttcgccgagc cgttcgtact ctgccccgag cggcaggtca tgggccggat
     1201 cgcccgtaaa cgggttcgcc aacccgtagg cgtccgcctg ttcggcgaag tctgaggcga
     1261 gcccctggag gcggttgaac tctcgcgccg cgtcctgcac cggctggtag gccgccgcca
     1321 cggcgggccg gtcgcggaa
//
LOCUS       DATIFF010000975         4587 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_121542, whole genome shotgun sequence.
ACCESSION   DATIFF010000975 DATIFF010000000
VERSION     DATIFF010000975.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4587
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121542"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..220)
                     /locus_tag="VLD58_14210"
     CDS             complement(<1..220)
                     /locus_tag="VLD58_14210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55509.1"
                     /translation="MALIVVSNRLPVTVRHGPDGVVLSESVGGVATGMRSVMATTGDT
                     WIGWPGPTDQLTPPEAETADRLLAARGCA"
     gene            282..1502
                     /locus_tag="VLD58_14215"
     CDS             282..1502
                     /locus_tag="VLD58_14215"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HSB55510.1"
                     /translation="MPKDLEYVALLFVLFVVPRYLQRFRLPSAVTSLALGALATGAGL
                     FEHDPTVTLLATFGIVALFLFAGLDVDLKELRPDIKVLGQHLAIWSATLAGLMGLIAW
                     QTDLSTRTAALVALGLVTPSTGFILDSLQQFGLSEDEKRWTKSKAIASELLALGVMFV
                     ALQSTSLRQLALSTALLAALIVLLPPFFRWFAARIAPYAPRSEFAFLLMVAVVCASAT
                     RRLGVYYLVGAFVVGLAARQFRTRLPAMSSERMLGAVEAFASFFVPFYFFKAGLGVNS
                     KELDLPAVLLGVGLLVGSVGLRLGEIALHRWLALREPPRSSLRIGVALLPTLVFTLVI
                     ADILRERPEVPPSLIGALVVFTTFITILPGLILRLPPVTYDQPHLYPLPPAGAGAAAA
                     PSSEPPGAPASIRP"
     gene            complement(1418..3310)
                     /locus_tag="VLD58_14220"
     CDS             complement(1418..3310)
                     /locus_tag="VLD58_14220"
                     /inference="COORDINATES: protein motif:HMM:NF012861.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HSB55511.1"
                     /translation="MRILSRFRAVRWRLHRLAQQARRTTYGPVNAAQGVWDDAVDWFN
                     GLELSENSILLGFAAVIGLAAAGGVVGFYKLIDLAHQAFFAWPESLLPDLGRLAYRPV
                     ITGAGAVAAWWLMRRFGRGNDGLNIPDVQLAVVRREGVLPPVPALARTAASAVTIGSG
                     GSAGSEGPVAVFGALIGSRLGAVFRFTGSRTGILVGAGAAAGISAAFNAPIAGAFFAL
                     EEVLGSFSTAAFAPVVVSSVLAAVVSRGVFGNHPVFPVPLELGYRLTREVVVFYPLLG
                     LLTGLVSVLFVRCYFGVDHWSRQARIGRGWLALFGGVVVGALTWLSRGLLVGTGHLAI
                     PLDRFDHMAWYLVALLAVGKIVATSITLNTGGSGGLFTPSLFVGAATGSAFGLLLGRL
                     LPGLGLSPEPYALVGMGSIIAAATNAPMTGIFMVWEMTGNSAIMLPLMLSVVVSHALA
                     RRLERDSLYSGWLRRRGEHIEHGEDRDVLAGLRVEDAFDRTPVRISSEAFASHFLPHL
                     GSGSQDVFPVVDPEGRLVGVLTVADLARVARDYRDLHQQLTAEDAAQPSETLGPEDSL
                     LEATRRMGARGAAALPVVDRTTGLLVGLLSRSDIVGLYGRILAGAPGGSEDGAAAAPA
                     PAGGKG"
     gene            3407..3916
                     /locus_tag="VLD58_14225"
     CDS             3407..3916
                     /locus_tag="VLD58_14225"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HSB55512.1"
                     /translation="MPSPTRVRPDATRRPPPSPVTRDIVNGLRRVVRAVELYSQEVLK
                     TFGLTGPQLWALKTLRRAGPLATSALAESLAVQPSTLSVLIDRLERRGLVRRVRPRED
                     RRFVEITLTPKGRELADRAPEAAQGRLLHGLSRLSLAEQRAILGAVHQLVAMMEATDV
                     EVRFFFSDD"
     gene            complement(3924..>4587)
                     /locus_tag="VLD58_14230"
     CDS             complement(3924..>4587)
                     /locus_tag="VLD58_14230"
                     /inference="COORDINATES: protein motif:HMM:NF044972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HSB55513.1"
                     /translation="RSLLWVVLVLLVLDNLGVNISTLMAGLGIGGVAIALATQNILGD
                     LFASLSIVLDKPFVVGDFIVVGDLMGTVERVGLKTTRLRSLSGEQLIFANADLLGSRV
                     RNFKRMSERRVLFDLGVTYETQAATLSRIPAMLREIVDAERGVRFDRAHLRSFDASAV
                     TFEVVYYILDPDYNRFMDTQQRINLAIFRRFEAENVEFAYPTQTLYVRTTEVAHSGPR
                     LA"
BASE COUNT          708 a         1686 c         1501 g          692 t
ORIGIN      
        1 gggcacagcc acgcgcggcc agcagccggt cagccgtctc ggcctcgggc ggcgtgagct
       61 ggtcggtcgg gcccggccat ccgatccagg tatcgccggt agtggccatc acgctgcgca
      121 tcccggtcgc aacaccgccg acactctcgc tgagcaccac cccatccggg ccatggcgca
      181 cggtgaccgg caggcggttc gatacgacga tcagggccac gcaccctcct ttccgttccg
      241 ccacggttgc atctccgatc gaccccgggc acaattggac cgtgcccaaa gacctcgagt
      301 atgtggcgct cctgttcgtg ttgttcgtgg tgccacgcta cctccagcgc ttccgcctcc
      361 cgagcgcggt cacctcgctc gccctgggcg cgctggcgac cggcgcgggg ctcttcgagc
      421 acgacccgac cgtgacgctg cttgccacct tcggcatcgt ggcgctgttc ctgtttgccg
      481 gcctcgatgt cgacctcaag gagctgcgcc ccgatatcaa ggtcctgggc cagcacctcg
      541 ccatctggag cgccactctt gcgggtctga tggggctcat cgcgtggcag accgacctgt
      601 cgacccgcac cgcggcgctg gtggcgctgg ggctggtgac gccttccacc gggttcatcc
      661 tggattcgct gcagcagttc ggcctctcgg aggatgagaa gcgctggacc aagtccaagg
      721 ccatcgcctc cgaactgctg gcgctggggg tgatgttcgt ggcgctgcag tcgacctcgc
      781 tccgtcagct ggccctgagc accgccctgc tcgccgcgtt gatcgtgctg ctgcctccgt
      841 tcttccgctg gttcgccgcc cggatcgcgc cgtacgctcc ccgttcggaa ttcgccttcc
      901 tgctgatggt ggcggtggtc tgcgcgtccg ccacccgccg cctcggggtg tactacctgg
      961 tcggcgcgtt cgtggtgggc ctggcggcgc ggcagttccg cacccggctt cccgccatgt
     1021 cctccgagcg aatgctggga gcagtggagg cgttcgcctc gttcttcgtc ccgttctact
     1081 tcttcaaggc gggcctgggc gtgaactcaa aggagctcga ccttcccgcg gtcctgctgg
     1141 gcgtcggcct gctggtcggc tcggtcgggc tgcggctggg ggagatcgcc ctgcaccgct
     1201 ggctggcgct ccgggagccg ccccgcagca gcctccgtat cggggtggcc ctgctgccca
     1261 cgctggtatt caccctcgtg atcgccgaca tcctgcggga gcggcccgag gtgccgccct
     1321 cgctgatcgg cgcgctggtg gtcttcacca ccttcatcac catcctgccc ggcctgatcc
     1381 ttcgattgcc gccggtgacc tacgaccagc cccacctcta tcccttgcct cctgccgggg
     1441 cgggcgcggc ggccgctccg tcctcggagc cgcccggcgc accggcgagt atccggccgt
     1501 aaagcccgac gatatcgctt cggctcagca ggcccaccag caggccggtg gtccggtcca
     1561 ccactggcag ggcggccgcc ccgcgcgcgc ccatgcgacg ggtcgcttcg agcagcgaat
     1621 cctccggtcc cagggtttcg ctcggctggg cggcatcctc cgcggtcagc tgctggtgca
     1681 gatcgcggta gtcgcgggcc acccgcgcca ggtccgccac cgtgagcacc ccgaccagac
     1741 ggccttcggg atccaccacc gggaagacgt cctggctgcc cgaccccaga tgcggcagga
     1801 agtggctggc aaaggcctcg ctggaaatcc gtaccggagt gcggtcgaat gcatcttcga
     1861 cccgcaatcc ggccagtaca tcccggtcct caccgtgctc gatgtgttcg ccccgccgcc
     1921 ggagccaccc gctgtacagc gaatcacgtt cgagccgacg ggccagcgca tgactgacca
     1981 ccactgacag catgagcggg agcatgatgg ccgagttgcc ggtcatctcc cacaccatga
     2041 agatccccgt catgggggcg ttggtcgccg ccgcgatgat cgagcccatc ccgaccagcg
     2101 cgtacggctc ggggctgagc ccaagccccg ggagcaggcg gccgagcaga aggccgaagg
     2161 cgctgccggt cgcggcgccg acaaacaacg agggcgtgaa caatccgccg gagccgccgg
     2221 tgttgagcgt gatcgaggtc gccacgatct tgcctaccgc cagcagggcc accagatacc
     2281 aggccatgtg gtcgaaccgg tcaagcggga tcgcgaggtg tccggttccc accagcagcc
     2341 cgcgggacag ccaggtgagc gcgccgacga ccacgcctcc gaacagcgcg agccagcctc
     2401 ggccgatccg ggcctggcgg ctccagtggt cgaccccgaa gtagcaccgc acgaacagca
     2461 ctgaaaccag tccggtcagc aatccgagga gggggtagaa gaccaccacc tcccgggtca
     2521 ggcgataccc cagttcgagc ggcaccggga acacggggtg attgccgaat acgccgcgcg
     2581 acacgaccgc cgccagcacg ctgctcacca ccaccggcgc gaaggcggcg gtactgaagg
     2641 acccgagcac ctcctccagc gcgaagaagg cgccggcaat cggggcattg aatgccgccg
     2701 agattcccgc cgcggcgccg gccccgacca ggattcccgt ccggctgccg gtgaaccgga
     2761 agaccgcgcc cagacgcgac ccgatcagtg ccccgaagac ggcgaccggc ccctcgctgc
     2821 cggccgagcc accgctgccg atggtgaccg cactggccgc ggtgcgggcc agggccggga
     2881 ccggaggcag gaccccctcg cgccggacaa cggccagctg gacatcgggg atgttgagcc
     2941 cgtcgttgcc acgaccgaac cgccgcatca gccaccaggc cgccaccgcg cccgcgccgg
     3001 tgatgaccgg gcgataggcg aggcgtccca ggtccggcag cagcgattcg ggccaggcga
     3061 agaaggcctg gtgggccagg tcgatcagct tgtagaaccc gaccaccccg cccgcggcgg
     3121 ccagtccgat gacggccgcg aacccgagca ggatgctgtt ctcgctgagc tcgaggccgt
     3181 tgaaccagtc gactgcgtcg tcccagacgc cctgggcggc gttgaccggg ccataggtcg
     3241 tgcgccgggc ctgctgagcc agccggtgca gccgccagcg aacggcacgg aatctcgaca
     3301 gaattctcac aacaccgcgg ggagaaggaa tgcgccgatt gacgccgggc gcagggtgac
     3361 tactttgaca tcaacctacc tccctgcccg acccgagcca actccgatgc ccagcccgac
     3421 ccgcgtccgt cccgacgcca cccggcggcc acccccgtct cccgtcaccc gggatatcgt
     3481 caacggcctt cgccgcgtgg tacgggcggt ggagctgtac tcccaggaag tcctcaagac
     3541 cttcgggttg accggcccgc agctgtgggc cctcaagacg ctccggcgcg ccggcccgct
     3601 cgcgaccagc gcgctcgcgg agtcgctggc ggtgcagccc agcaccctgt cggtcctgat
     3661 cgaccgcctc gagcggcggg gactggtgcg ccgggtccgg ccccgggagg accgccgctt
     3721 cgtggagatc accctgaccc ccaagggccg ggagcttgca gaccgcgcgc cagaggccgc
     3781 ccagggccgc ctgctccacg gactctcccg cctgtcgctc gcggagcagc gggccatcct
     3841 gggggccgtc caccagctgg tggccatgat ggaagccacc gacgtcgagg tccgcttctt
     3901 cttctccgac gactaacccc ggatcaggcc agcctcggcc cggagtgtgc gacctcggtg
     3961 gtgcgcacat agagggtctg cgtcgggtag gcgaactcca cgttctccgc ctcgaagcgg
     4021 cggaagatgg ccaggttgat ccgctgctgg gtatccatga accggttgta gtccgggtcc
     4081 aggatgtagt acaccacctc gaaggtgacg gcggaggcgt cgaaactgcg caggtgggcc
     4141 cggtcgaacc gcaccccgcg ctcggcgtcg acgatctcgc gcagcatggc cgggatccgg
     4201 ctcagggtcg ccgcctgggt ctcataggtc acccccaggt cgaagagtac ccgccgctcg
     4261 ctcatccgct tgaagttacg gacccggctt cccaacaggt ccgcattggc gaagataagc
     4321 tgctcgccgg acaggctgcg cagccgggtg gtcttgaggc ccacccgctc caccgtcccc
     4381 atgaggtcgc ccaccacgat gaagtcgccg accacgaagg gcttgtccag gacgatggag
     4441 agcgacgcga acaggtcccc gaggatgttc tgggtggcga gggcgatcgc cacaccaccg
     4501 atccccagcc ccgccatcag ggtgctgatg ttcaccccga gattgtccag caccagcagc
     4561 accagcacca cccagagcag gctccgc
//
LOCUS       DATIFF010000976         3902 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1658879, whole genome shotgun sequence.
ACCESSION   DATIFF010000976 DATIFF010000000
VERSION     DATIFF010000976.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3902)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3902)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3902
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1658879"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(133..909)
                     /locus_tag="VLD58_14235"
     CDS             complement(133..909)
                     /locus_tag="VLD58_14235"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSB55514.1"
                     /translation="MTTVASQEDTERLQARVRELEHERKHLLAIIEILQEIAGSLHFV
                     DIMQSIARRLGEVYGLDRSSIFLAERDGKTARLVASFEDPSIRNYVVDLERYPELRRA
                     LTTGETVYIPDVEQDATMTHLKGTFDTRRVRAITVVPITWRRAAIGAVLLRTFRDSPP
                     FTEIDVRFVEVVASLTAKALRNAHRFEKLQQRVGDPTGSRAVERERVALIGFLRRLLE
                     EFAAREGPWSEGVLARASAEEIERLVGVALTVLQQEAAAR"
     gene            999..1310
                     /locus_tag="VLD58_14240"
     CDS             999..1310
                     /locus_tag="VLD58_14240"
                     /inference="COORDINATES: protein motif:HMM:NF024143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HSB55515.1"
                     /translation="MSDHTDEQDDELEPEVEESSRGWSTGSFLAGIVIGAAVGAGVAL
                     LLAPESGERTRRAIRKRVRGLREDAADGYLSARKEVRQMLKDKKAALREKVKDLAESL
                     D"
     gene            complement(1307..2098)
                     /locus_tag="VLD58_14245"
     CDS             complement(1307..2098)
                     /locus_tag="VLD58_14245"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSB55516.1"
                     /translation="MKRCAMMVAGMLVAVTLPAAAQDVAEMIRQAVEAQLARDPATAM
                     GHLEAALAAEPQNYEANWRAAENLMDIGKQTPDSVKSPERDSIYARAERVARVAVEAN
                     PNGPEGYYVLSAAIGRASLTKSSKERVRRAAEIRSAGLKAIELDSLNHKAYHVMGRWN
                     AEIMRLSGFTRFFAKTFLGGKIFNAASWDSATVYMTKAVAISPENIYHRLDLAEILID
                     RDRYSEARAELTRVEELPIYDVMDPTYKLRAASLLRKIKDKKDKS"
     gene            2347..3669
                     /locus_tag="VLD58_14250"
     CDS             2347..3669
                     /locus_tag="VLD58_14250"
                     /EC_number="2.4.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006206 - pyrimidine nucleobase metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine phosphorylase"
                     /protein_id="HSB55517.1"
                     /translation="MHFTPLIERKRDGGVLTPAEWQAVVAAYLEDEIPDYQMSAMLMA
                     ICCRGLERQELVALTGAMLGSGASLDFGRWDTPRVDKHSTGGVGDKISLVLAPLVASL
                     GVAVPMMSGRGLGHTGGTTDKLESIPGLTTALDLPQVKAQVERIGVAMFGQTPDVAPA
                     DRRLYALRDVTGTVPSIPLIAASIMSKKLAEGLTGLVLDVKAGSGAFMSDPTDAVELA
                     RTMVDLGEASGCRTTALVTAMDRPLGRAIGNALEIEEALQALEGKGPEDVMVITKALA
                     IEMLVLAGQGTDRAALAARVSDALLSGKALAKFRELIEAQGGNPAIVDDPGGLPQAAV
                     VELFESPVNGVVAAVAPRPLGQAVVAMGGGRQCLGDTVDHSVGFVVSARTGARVRKGE
                     PIASVFARDDEGARVGLAALAEAITYGEPPPHLPLISHRITRTGVESF"
     gene            3669..3890
                     /locus_tag="VLD58_14255"
     CDS             3669..3890
                     /locus_tag="VLD58_14255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55518.1"
                     /translation="MPELLLLVLVAAVLVWFFSPGTRQRETPDDPIEPVDESELDAAE
                     REVRDLDLNQRPEDGFEGDDWGPGAGGTR"
BASE COUNT          585 a         1301 c         1353 g          663 t
ORIGIN      
        1 tggccacgag agagcctgtg aggaggcggt cgtccgtctg gtcgaaaggt ggcagcctga
       61 gggcgtgaac gcgaccgagg gatccagccg gcccgggctg gatccctcgc tctttcggga
      121 taggtcgtgc cgctacctgg ccgcggcttc ctgctgcagt accgtcagcg ccacgcccac
      181 cagccgctca atctcctcgg cgctggcgcg cgccaggacg ccttcggacc aggggccctc
      241 gcgcgcggcg aactcctcca gcaggcggcg caggaaaccg atcagcgcca cgcgctcccg
      301 ttccacggcg cgggagccgg tggggtcgcc cacccgctgc tgcagtttct cgaaccggtg
      361 ggcgttgcgg agggccttgg cggtgaggct cgccaccacc tcgacgaacc ggacatcgat
      421 ctccgtgaag ggcgggctgt cgcggaaggt ccggagcagc acggcgccga tcgcggcccg
      481 gcgccaggtg atggggacca cggtgatcgc ccgcacccgc cgggtatcga acgtcccctt
      541 gaggtgggtc atcgtggcgt cctgctccac atcggggatg tagactgtct ccccggtggt
      601 cagcgcgcgc ctgagctccg gatagcgctc caagtcgacc acgtaattcc gaatgctggg
      661 gtcctcgaag ctcgccacca gccgggcggt cttgccgtcc cgctcggcca ggaagatcga
      721 cgaccggtcc agaccgtaca cctcgcccag ccgccgggcg atggactgca tgatgtccac
      781 gaaatgcagc gagccggcga tttcctggag gatttcgatg atggcgagca ggtgcttccg
      841 ctcgtgttcc agctcacgga cccgggcctg aagacgctcg gtgtcttcct gcgatgcgac
      901 ggtggtcatg gcgggtctgg taggggatgc cgaagttacg tggcgtgggg gaccagaatc
      961 aaggtacctt tgggcgggca ttcgaacgga gaggatctat gtccgatcat accgatgagc
     1021 aggatgatga gctggagccc gaggtggagg aatcgtcccg cggctggagc accggcagtt
     1081 tcctggccgg gatagtgata ggggcggcgg tcggggccgg ggtggccctg ctgctggcgc
     1141 cggagtcggg ggagcgcacc cgccgcgcta ttcgcaagcg ggtgcggggc ctccgggagg
     1201 atgcggcgga cggctacctg tcggcccgca aggaggtccg ccagatgctc aaggacaaga
     1261 aggccgccct gcgcgagaag gtgaaggacc tggccgagag cctcgactaa ctcttgtcct
     1321 tcttgtcctt gatcttccgg agcagggaag ccgcccggag cttgtaggtc gggtccatga
     1381 cgtcgtagat cgggagctcc tccacccggg tcagctcggc ccgggcctcg ctgtagcggt
     1441 cccggtcgat caggatctcg gccaggtcga ggcgatggta gatgttttcc ggggagatcg
     1501 ccacggcctt ggtcatgtag accgtggcgc tgtcccagga cgccgcattg aagatcttcc
     1561 cgcccagaaa cgtcttcgcg aagaagcggg tgaatcccga cagccgcatg atctcggcgt
     1621 tccaccgccc catcacgtgg taggccttgt ggttgaggct gtcgagctcg atggccttga
     1681 gccccgccga gcggatctcg gccgcccgcc gcacccgctc cttgctgctc ttggtgagcg
     1741 aggcccgccc gatggcggca ctcaggacgt agtagccctc cgggccattg ggattcgcct
     1801 cgaccgccac ccgcgccacc cgctccgccc gggcatagat cgagtcccgc tccggcgact
     1861 tcaccgagtc cggggtctgc ttgccgatgt ccatcaggtt ctcggccgcg cgccagttgg
     1921 cctcgtaatt ctgcggctcc gcggcgaggg cggcctcgag atgccccatc gcggtggcgg
     1981 ggtcgcgcgc cagctgcgct tcgacggcct ggcggatcat ctcggccacg tcctgcgccg
     2041 cggcgggcag ggtcaccgcc accagcattc ccgcaaccat catggcacag cgcttcatcg
     2101 gtatcccccg aatccgaaag acaggaacca cgagtctgct tgaaggtcat ggcgtgtcgt
     2161 ggggatttca aggcttgcgc accctcacgc cgcggggtag cctgtccagc gttgacggcc
     2221 ggtcttctcc cttctccctt ctcccttctc ccttcttact tctcccttct tacttctccc
     2281 ttcttacttc ttacttctta cttcttactc ctaactcctt actcctcacc ccccaccctt
     2341 cgacccatgc acttcacccc gctgatcgag cggaagcgcg atggcggagt cctcaccccc
     2401 gccgaatggc aggcggtggt cgctgcctat ctcgaggacg agatccccga ctaccagatg
     2461 tcggccatgc tcatggcgat ctgctgccgc gggctcgagc ggcaggagct ggtggcgctg
     2521 accggcgcca tgctggggtc cggcgcgtca ctcgacttcg gccgatggga tacgcctcgg
     2581 gtggacaagc actccaccgg cggtgtgggc gacaagatct ctctcgtcct cgctccgctc
     2641 gtcgccagcc tcggcgtcgc cgtgccgatg atgtcgggcc gaggactggg ccacaccggg
     2701 ggcactaccg acaagctcga gtcgataccc gggctcacca ccgcgctgga tcttccccag
     2761 gtgaaggccc aggtcgagcg gatcggcgtc gcgatgttcg gccagacacc cgatgtggct
     2821 cccgccgacc ggcggctcta tgcgctccgc gacgtcaccg gaacggtccc gtcgattccg
     2881 ctcatcgccg ccagcatcat gtcgaagaag ctggccgaag ggctcaccgg gctggtactc
     2941 gacgtgaagg ccggaagcgg cgcgttcatg agtgacccga cggatgccgt cgagctggcc
     3001 cggaccatgg tggacctcgg cgaagcgagc ggctgccgca ccactgcgct ggtcaccgcc
     3061 atggaccggc cgctgggccg cgccatcggc aacgccctcg agatcgagga ggcgctccag
     3121 gcgctcgagg ggaaggggcc cgaggacgtc atggtgatta ccaaggcgct tgcgatcgag
     3181 atgctggtgc tggcggggca gggcaccgac cgcgccgccc tggcggcccg ggtgtccgat
     3241 gcgctgctct cggggaaggc gctggccaag ttccgcgagc tgatcgaggc gcaaggaggg
     3301 aatcccgcga tcgtcgacga tcccggcggg cttccccagg ccgccgtggt ggagctcttc
     3361 gagtcaccgg tgaacggcgt ggtggcggct gtcgcaccga ggccgctggg gcaggccgtc
     3421 gtggcgatgg gtgggggccg tcagtgcctc ggcgacacgg tggatcacag cgtcggcttc
     3481 gtggtgtcgg ccaggaccgg cgcacgggtg cggaaggggg agccgatcgc ctcggtcttc
     3541 gcgcgggacg acgaaggagc ccgggtcggc ctggctgcgc tggcagaagc gatcacctac
     3601 ggcgaaccgc cgccgcacct tccgctcatc tcccaccgga tcacccgcac tggggtggag
     3661 agcttctgat gcccgagctc ctgctcctgg tgctggtcgc cgcggtgctg gtgtggttct
     3721 tctcgcccgg gacgcggcag cgggagaccc cggatgaccc catcgagccg gtggacgaat
     3781 cggagctgga tgccgccgag cgcgaggtgc gcgacctcga cctcaatcag cggccggagg
     3841 atggattcga aggcgacgac tggggaccgg gggccggggg gactagatag gccggaggcc
     3901 gg
//
LOCUS       DATIFF010000977         2295 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1199611, whole genome shotgun sequence.
ACCESSION   DATIFF010000977 DATIFF010000000
VERSION     DATIFF010000977.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2295
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1199611"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1052
                     /locus_tag="VLD58_14260"
     CDS             <1..1052
                     /locus_tag="VLD58_14260"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_process: GO:0019632 - shikimate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HSB55519.1"
                     /translation="DGEILRLFNERLEVAARIGAVKSRLGLGIRDTRREAQVFQRLMS
                     LNRGSLLSNRYVVKVFAALMAAARDVQGSAAHPADGFGTPAIFAVFGNPVVHSLSPVM
                     HNAAFAATGYNGIYAAIRVKDIRPAVAGMRALGLKGASITIPHKESVLACLDDIDPTA
                     RRIRAVNTIVNDDGSLKGFNTDCDGVIQALAEKISIEGRRVGILGAGGAARAVAFAVI
                     GRGATATIFNRSREKGEALAADLGADFKPLSEFAAERCDILVNTTPVGMSPQGQDTPL
                     LGEKLKPGLVVMDIVYNPLKTRLLREAEAAGCETIDGLSMFVHQGARQFELWTGLAAP
                     VDIMRMAVEAELLTK"
     gene            1101..>2295
                     /gene="aroA"
                     /locus_tag="VLD58_14265"
     CDS             1101..>2295
                     /gene="aroA"
                     /locus_tag="VLD58_14265"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF012497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HSB55520.1"
                     /translation="MAVPGSKSYTHRVLIAAALSDGRCLIENALESEDTHLTRDALKK
                     WGVAIAPEGEALAVAGCQGEFKTCRSPLFLGNSGTSMRLLTAIAALVPGTSILTGSDR
                     LRARPIQDLLDGLAQAGVAARSLDGNGCPPVAIEGGGLTGGRVDLNCALSSQFLSALL
                     LVGPHAREGIEVRVTHGPVSRPYIDITLDTMASFGVQAERDGYAWFKVPGGQRYRAGR
                     HRVEPDCSQAGYFWAAAAVTASTVSVRGARRGSRQGDIRILEILERMGCRVSSETDGV
                     AVSGGPLSAVEVDMADIPDVVPTLAVTAAYARGRTVIRNVAHLRGKESDRLAAVSAGL
                     ARMRVRSGCDADTLWVDGGQPHGAAIDCCNDHRIAMSFAVAGLKTPGMAILDESCVQK
                     SFPTFW"
BASE COUNT          361 a          764 c          826 g          344 t
ORIGIN      
        1 tggacggcga gatcctgcgg ctgttcaacg aacggctgga agtcgccgcc cggatcggcg
       61 ccgtcaaatc gcggctcggg ctcggcatcc gcgacacccg gcgggaggcc caggtgttcc
      121 agcgcctgat gagcctgaac cggggcagcc tgctttccaa ccgctacgtg gtcaaggtgt
      181 ttgccgcgct catggcggcc gcccgcgacg tccagggctc ggccgcccac ccggccgacg
      241 gcttcgggac gcccgccatc ttcgcggtgt tcggcaaccc cgtggtgcac agcctgagcc
      301 cggtgatgca caatgcggcc ttcgcggcca ccggctacaa cggcatctat gcggccatcc
      361 gggtgaagga catccggccg gccgtcgccg ggatgcgggc cctggggctc aagggcgcca
      421 gcatcaccat cccgcacaag gagtccgttc tggcctgtct ggacgacatc gacccgaccg
      481 ctcgacgcat ccgggccgtg aacaccatcg tgaacgacga cgggtcgttg aagggcttca
      541 acacggactg cgacggcgtc atccaggcgc tggccgaaaa aatttctatc gagggccggc
      601 gcgtgggcat cctcggggcc ggcggcgccg cccgggccgt ggcgtttgcc gtcatcggcc
      661 ggggagcgac ggcgacgatc ttcaaccggt ccagggagaa aggggaggcg ctggcggccg
      721 acctcggcgc ggatttcaag cccctgtccg aattcgccgc ggagcgctgc gacatcctgg
      781 tcaacacgac cccggtggga atgtccccgc aggggcagga cacccctctt ctcggcgaga
      841 aactgaaacc cgggctggtg gtcatggaca tcgtctacaa cccgctgaag acccggctgc
      901 tgagggaggc ggaggccgcc ggctgcgaga ccatcgacgg cctgtccatg ttcgtccacc
      961 agggggcgcg gcagttcgag ctctggacgg ggctggcggc gccggtggac atcatgcgga
     1021 tggccgtcga agccgaactg ttgacgaagt aggatatttc catgcgtgaa atcaaaacgc
     1081 ttccccccac gcgggccgcg gtggcggtgc cggggtcgaa gagctacacc caccgggtgc
     1141 tcatcgcagc ggcgctttcc gacgggcgct gcctgatcga gaacgccctg gagagcgaag
     1201 acacccacct gacgcgcgac gcattgaaaa aatggggcgt ggcgatcgcg ccggaaggtg
     1261 aggcgctggc cgttgcgggt tgccaaggtg aattcaaaac ctgccgaagc cccctttttt
     1321 tgggcaactc ggggacctcc atgcgcctgc tcacagcgat cgcggccctt gtacccggga
     1381 catccatcct gaccggcagc gaccggctca gggccaggcc catccaggac ctgctggacg
     1441 gtctcgccca ggcgggcgtg gccgcgcggt cgcttgacgg aaacgggtgc ccgccggtgg
     1501 cgatcgaggg gggcgggctc accggggggc gcgtcgactt gaactgcgcc ctcagcagcc
     1561 agttcctctc cgcgctgctg ctcgtcggcc cgcacgcgcg cgaagggatc gaggtgcgcg
     1621 tgacccacgg gccggtgtcg cggccctaca tcgacatcac cctcgacacc atggcgagct
     1681 tcggcgtgca ggccgagcgc gacggctatg cctggttcaa ggtgccgggc gggcaacgct
     1741 accgcgccgg gaggcaccgg gtcgagcccg actgctccca ggccgggtat ttctgggcgg
     1801 ccgcggccgt cacggcgtcc acggtcagcg tgcggggggc gcgccgcggt tcgcgccagg
     1861 gggacatccg gatcctggag atcctggagc ggatgggctg ccgggtatca tccgagacgg
     1921 acggggtcgc ggtttctggc ggcccgcttt ccgcggtcga ggtcgacatg gccgacatcc
     1981 cggacgtggt gcccacgctg gcggtgacgg cggcctatgc ccggggccgg acggtgatcc
     2041 gcaacgtggc gcatctcagg gggaaggaaa gcgaccggct ggcggccgtg agcgccgggc
     2101 tcgcccggat gagggtccgg tcaggctgcg acgccgacac cctctgggtc gacggcgggc
     2161 agccgcacgg tgcggccatc gactgctgca acgaccaccg catcgccatg agctttgcgg
     2221 tggcgggtct caagactccc gggatggcga tcttggacga gagctgcgtg cagaaatcct
     2281 tcccgacgtt ctggg
//
LOCUS       DATIFF010000978         1656 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_121822, whole genome shotgun sequence.
ACCESSION   DATIFF010000978 DATIFF010000000
VERSION     DATIFF010000978.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1656
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121822"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            82..984
                     /locus_tag="VLD58_14270"
     CDS             82..984
                     /locus_tag="VLD58_14270"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB55521.1"
                     /translation="MSRIIEIPASFDDRSFEQFAASFSAGPLSDRTVFDARPAQWASP
                     YGLVAMLTAGQVIREAGGPTPDFTVPAAEEVRRYWARTGFFAHAAELFELHGKVPRIK
                     PDEHSDVLLDVTPVRASEDVHAVVGKIQSGAARILTHELGIDAKATMGFAMALSEACQ
                     NIVEHAGTGGWVAVHAYTFRKRLGKRVVVIAVSDGGVGFRRSLEATQARRFGERWGDG
                     AALEAAVIQNVSRFRDPGRGQGIAGIKRYLGRWSGKLSIRSGTARIAIVPDWDDEPPM
                     TEHLAPFPGAQLQIVIPAQEPAAG"
     gene            981..1532
                     /locus_tag="VLD58_14275"
     CDS             981..1532
                     /locus_tag="VLD58_14275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55522.1"
                     /translation="MTQTIRVEQLLRETVQSPYCDLVTRPTGRAVRSSIQQRLTALHT
                     TLTLLDFSEVGLVDFSCADEVIAKLLLEPVSETAIVLQGLREEQLEAIEHVLEHHDLA
                     TLVRDPERGIARIVGRASPDLRTAFFALQQHGPAGADGLARLTGWAADHAEAVLAALA
                     RLRLVIHSTSGFMVPFGSEPLSP"
BASE COUNT          242 a          594 c          559 g          261 t
ORIGIN      
        1 cgcccgcaat gcgaccctcc gcggcgccac tacgctgggg ccgctccttc ggggcgagct
       61 ggtggcggcc ggggcctccg cgtgagccgg atcatcgaga ttccggcctc gttcgacgac
      121 cggagcttcg agcagttcgc cgcttccttc tccgccgggc cgctgtccga tcgcacggtg
      181 ttcgacgccc ggccggccca gtgggcctcg ccctacggcc tggtggccat gctgaccgcc
      241 ggccaggtca tcagggaggc ggggggaccg acgcccgatt tcaccgtccc cgcggccgag
      301 gaggtccgcc gctactgggc ccggaccggc ttctttgccc atgcggccga gttgttcgag
      361 ctgcacggaa aggtgccgcg catcaaaccg gacgagcact cggacgtgct gctggacgtg
      421 accccggtgc gcgcctccga ggacgtccac gcggtggtgg ggaagatcca gtccggcgca
      481 gcccggatcc tgacccatga gctggggatc gacgccaagg cgactatggg ctttgccatg
      541 gcactttcgg aggcatgtca gaatattgtg gagcatgcgg gcaccggtgg ctgggtggcg
      601 gtgcacgcct acaccttccg gaaacgcctc ggcaagcggg tggtggtgat cgcggtgagc
      661 gatggcggtg tcggattccg ccgctcgctc gaagccaccc aggcccgccg gtttggtgag
      721 cggtggggtg acggagccgc gctggaggcg gcggtcatcc agaacgtcag ccggttccgt
      781 gacccgggcc gcgggcaggg aatcgccggc atcaagcgct atctcggacg ctggagcggc
      841 aagctctcca tccggagcgg caccgcccgg attgccattg tgccagattg ggacgatgaa
      901 ccgcccatga ctgaacacct cgcgccgttc ccgggcgccc agctgcagat agtgatccca
      961 gcccaggagc cggccgccgg atgacacaga cgattcgggt ggagcagctc ctccgcgaga
     1021 cagtccagag tccctactgc gatctcgtca cccgtcctac cggccgggcg gtgcggagca
     1081 gcatccagca gcggctcacc gcgctccaca ccaccctgac cctgctggat ttctccgagg
     1141 tcggcctggt cgacttcagc tgcgccgatg aggtcatcgc caagctcctg ctggagccgg
     1201 tgagcgagac cgccatagtg ctccagggac tccgggagga gcagctcgaa gccatcgagc
     1261 atgtgctgga gcaccacgac ctcgcgaccc tggtgcgcga tcccgagcgc ggcatcgccc
     1321 ggatcgtggg ccgggcctcg ccggacctcc gcaccgcctt cttcgccctg cagcagcacg
     1381 gccccgccgg cgccgacggc ctggcgcggc tgaccggctg ggcggcggat cacgccgagg
     1441 ccgtgctggc cgcgctggcc cggctccggc tcgtcatcca cagtacctcc ggtttcatgg
     1501 ttccgttcgg ctcggagcca ctctccccct gacggactcc cgatgaagcg gaagatcggc
     1561 ctctccaccc tcgccattca cggcattccc tcgcggcagg gcgactggac ccccgtggtc
     1621 gccccgctct ttcagagcag caccttcacc aacccg
//
LOCUS       DATIFF010000979         1044 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_736997, whole genome shotgun sequence.
ACCESSION   DATIFF010000979 DATIFF010000000
VERSION     DATIFF010000979.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_736997"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            246..>1044
                     /locus_tag="VLD58_14280"
     CDS             246..>1044
                     /locus_tag="VLD58_14280"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase family protein"
                     /protein_id="HSB55523.1"
                     /translation="MTHTIGATDHRPLTTDSRRRRYRDVRELIASPENPTPLVRLNRV
                     LPPGLDAYLKLEWFNPFGSIKDRTARALLEGMRRRDELGDKELVEATSGNTGIALAAL
                     AALEGLRLTVTIPSGVPEEKLVLLRMLGATVLPTPDELCPVDNPRDGAIALARAIAES
                     PAHAGRYAMPDQYANPDNVRAHYETTGPEIWEQTEGQVRTFVAGYGTCGTITGVARFL
                     KERDPSIRVVAVEPQPGHRLPGLKNLEEARAPAILDRSVIDQVIRVDD"
BASE COUNT          167 a          365 c          362 g          150 t
ORIGIN      
        1 gcctcgccgg gctcggggaa ctcgtcgggc ggtcaccggg ttcaagcagg tgatgaccgc
       61 caaccgccag cacctcgggg cctgcgcctg tagccgctgc caaccagatg gcagggcggg
      121 tcgtgctggc cggaggtccc tggtcctggg ctagcgcgag cgagcgtcgc gatcgatcac
      181 ttccgcccgc gcggttcacc gtcgcgggct tgttgtttcg atggagcatg aggagttgaa
      241 tgacgatgac gcatacgatc ggagccaccg accaccggcc gctgaccact gattcccgcc
      301 gccgccgcta ccgtgatgtg cgcgagctga tcgcctcccc cgagaatccg acgccgctgg
      361 tgcggctgaa ccgggtgctg ccgccggggt tggacgccta tctcaagctg gagtggttca
      421 atcccttcgg ctccatcaag gaccgcaccg cccgggcgct gctcgaggga atgcggcgac
      481 gggacgagct gggggacaag gagctggtcg aggcgacctc gggcaacacc ggcatcgcgt
      541 tggccgccct cgccgcgctc gagggacttc gactcaccgt caccatcccc tcgggcgtgc
      601 cggaggagaa gctcgtattg ctgcgcatgc tcggggccac ggtgctgcca acgccggacg
      661 aattgtgccc ggtcgacaac ccgcgcgacg gggccatcgc gctcgcccgc gccatcgccg
      721 agagtccggc gcacgccggc cgctacgcga tgcccgacca gtacgccaac cccgacaacg
      781 tgcgggcgca ctacgagacc acgggccctg agatctggga gcaaaccgag ggccaggtgc
      841 gcaccttcgt cgccggctac ggcacttgcg gcaccatcac cggagtggcg cgcttcctga
      901 aggagcgcga cccgagcatc cgcgtcgtgg ccgtggagcc gcagccgggg catcgcctcc
      961 cgggactcaa gaacctggag gaggccaggg cgccggccat cctcgatcgc tcggtaatcg
     1021 accaggtgat ccgggtggac gacg
//
LOCUS       DATIFF010000980         1112 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1352547, whole genome shotgun sequence.
ACCESSION   DATIFF010000980 DATIFF010000000
VERSION     DATIFF010000980.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1352547"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..746)
                     /locus_tag="VLD58_14285"
     CDS             complement(<1..746)
                     /locus_tag="VLD58_14285"
                     /inference="COORDINATES: protein motif:HMM:NF015662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55524.1"
                     /translation="MARATARITLIQVMLGLGMVIVLVRAGQLQLIEGSRWRAEAEKA
                     RQERRVLEAKRGGIYDRNGVPLAVTQEFFHVGIAPNELRDLPADARVIARALGMSLGE
                     VQRDLRTRKWVAYRGPFSGLQIQPLREIRGVHLDGEFARHAPSGSLASAVIGALKPDS
                     SRGASGIELTLNDILTGTPGLAVLLKDRAGRRYDSPSRLQREPVPGKDVYLTIDAELQ
                     EIAERALDEAMSRYEANGGDIVILDPHTGEL"
     gene            complement(749..1009)
                     /locus_tag="VLD58_14290"
     CDS             complement(749..1009)
                     /locus_tag="VLD58_14290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55525.1"
                     /translation="MLWLVVFLVVAVLVQARQSSAIATAGRYRKLREQRVALEAERAE
                     LERQIHVATSRRVLGEKAEKELGLIQPADSQFTVFPLDRARP"
BASE COUNT          156 a          387 c          390 g          179 t
ORIGIN      
        1 agctcgccgg tgtgggggtc gaggatgacg atgtcgccgc cgttggcctc gtaccggctc
       61 atcgcctcgt ccagcgcccg ctcggcgatc tcctgcagct cggcgtcgat ggtgagatag
      121 acgtccttcc cgggcaccgg ctcccgctgc agccgcgacg ggctgtcgta gcgccggccg
      181 gcgcggtcct tgagcagcac ggccagccct ggggtgccgg tcaggatgtc gttgagagtg
      241 agctcgatgc cgctcgcacc gcgggagctg tccggcttga gcgcgccgat gaccgcgctc
      301 gcgaggctcc ccgagggcgc atgccgcgcg aattcgccgt cgagatgcac gccccggatc
      361 tcgcggagtg gctggatctg cagcccgctg aaggggccgc ggtaggccac ccacttccgg
      421 gtccggaggt cccgctgcac ttcgccgagg gacatcccca gcgcccgcgc gatgacccgc
      481 gcatcggccg ggaggtcgcg gagctcgttg ggtgcgatgc ctacgtggaa gaactcctgg
      541 gtgaccgcga gcggtacgcc gttgcggtca tagatcccgc cccgcttggc ctcgagcacc
      601 cgccgctcct gccgggcctt ctccgcctcg gcccgccatc gggagccctc gatcagctgg
      661 agctgccccg cccggaccag cacgatcacc atgcccaggc cgagcatgac ttgaatcagg
      721 gtgatgcggg cggtggcgcg ggccatgatc agggacgggc gcgatcgagg gggaacaccg
      781 tgaattgcga atcggccggc tggatcaggc ccagttcctt ttcagccttc tcccccagta
      841 cccggcggct ggtggcgacg tggatctggc gctcgagttc cgcgcgctcc gcttccagcg
      901 ccacgcgctg ctcccggagc ttccggtaac gcccggcggt ggcgatggcc gagctctggc
      961 gggcctggac cagcacggcc acgaccagga acacgaccag ccacagcatg acccagaacc
     1021 tgcctctaaa cggccttgag gaagatgcgg agggtggcac tccgggctct cggattgttg
     1081 gcgatttcgg tggcgtccgg acggatcagc tt
//
LOCUS       DATIFF010000981         1999 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1968201, whole genome shotgun sequence.
ACCESSION   DATIFF010000981 DATIFF010000000
VERSION     DATIFF010000981.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1999
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1968201"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..980
                     /locus_tag="VLD58_14295"
     CDS             <1..980
                     /locus_tag="VLD58_14295"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HSB55526.1"
                     /translation="SLGVAQLAAMIDLQRRRAPLERDVVFLAVADEENGGLNGTGWLL
                     ANHPELFKGVEGVIGEGGRSQTGAGGKLLWWGIEVAQKRPLWLEVSTSGRGGHGAGLN
                     PESANHQLIEGLARLLGEPAHWRVTPPVRDYSHAIAPLQNERWRRVFSSIDSVIAESG
                     PKEFLMPGMANLFLDTVQVTVLRGGERINVVPERASARLDIRLLPDTDAAAFLANVKS
                     RLGQGFEVKVLVTAPPSPPSPASGRLYGAIERVLRPDGPVVPTFIAGFTDSRFFRERG
                     IPAYGLSPFRLSPDDSKGIHSTDEHIPLAEVDRGVERMRRILLAYAGGQ"
     gene            1137..1652
                     /locus_tag="VLD58_14300"
     CDS             1137..1652
                     /locus_tag="VLD58_14300"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HSB55527.1"
                     /translation="MKRRLAKTETGFTLIELLIVIAIIGILAAILIPNLLDAMEKAKQ
                     KRTVADMRITGTAMFSWLSDEVGAASAGAVVTQVDISQYKSIDLSSLRDLLTPQYIET
                     IPVLDGWKKDYQYFLDPNNPLNQQVMAIGSGGRDRSTVSGSYTVAGFDPTDYDQDILW
                     ADGFFVRWPQK"
     gene            1666..>1999
                     /locus_tag="VLD58_14305"
     CDS             1666..>1999
                     /locus_tag="VLD58_14305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55528.1"
                     /translation="MRRRSAAIPPAVLAAGWLLSLLAPLLSPARALANRDISLFHLPL
                     RAAFRDLAAHGLPTWNPWLNGGQPLLSNPSYAAFYPPSWLVFAVPPHYLFSVLAFLHG
                     AIAFAGAWR"
BASE COUNT          306 a          674 c          691 g          328 t
ORIGIN      
        1 agagcttagg ggtcgcgcaa ctggcggcga tgatcgatct ccagagaaga cgggcgccgc
       61 tggagcgcga cgtggtcttc ctcgccgtgg ccgacgagga gaacggcggc ttgaacggca
      121 cggggtggct gctcgccaac catccggagc tgttcaaggg ggtggagggg gtgatcggcg
      181 aaggggggcg cagccagacc ggggccggcg gcaagctcct ttggtggggg atcgaggtgg
      241 cgcagaagcg tccactctgg ctggaggtct cgacctcggg gcgcggcggg cacggcgccg
      301 gcctcaaccc ggagagcgcc aaccaccagc tcatcgaggg gctggcgcgc ctgctcggcg
      361 agcccgccca ctggcgggtg acgccgccgg tgcgcgacta ttcgcacgcc atcgcgccgc
      421 tgcagaacga gcgctggcgc cgggtcttct ccagcatcga ctcggtgatc gcggagagcg
      481 gcccgaagga gttcctgatg cccggcatgg ccaacctctt cctcgacacc gtgcaggtga
      541 cggtgctgcg cggcggcgag cggatcaacg tcgtgcccga gcgggcgtcg gcgcggctcg
      601 acatccggct cctccccgac accgatgcgg ccgccttcct ggcgaacgtc aagagccggc
      661 tgggccaggg cttcgaggtg aaggtgctgg tgaccgcgcc cccctcgccg ccgtcgccgg
      721 cctccgggcg gctctacggg gcgatcgagc gggtgctgcg cccggacggg ccggtggtgc
      781 ccaccttcat cgccggcttc accgactcgc gcttcttccg cgagcggggg atcccggcct
      841 acggcctgtc gccgttcagg ctctcgcccg acgactcgaa ggggatccac agcaccgacg
      901 agcacatccc gctcgccgag gtcgaccgcg gtgtggagcg gatgcgccgg atcctcctcg
      961 cctacgccgg cggtcagtga catcccgtgc cgcaaagatg acgatttttg tcgaggagag
     1021 acttggctat aagcggaaac cgctgattct caagggcttc cgccgggtgc ctctctggca
     1081 tgtcccttgc cctgaaatcc tcccgaacac ttgagggaac cttggaggaa tctgtgatga
     1141 agcgtagact cgcgaaaacg gagacgggct ttacgctgat tgagctgctg atcgtcatag
     1201 caatcatcgg catcctggcg gccattctga tccccaacct gctggacgcc atggagaagg
     1261 cgaagcagaa gcggacggtg gcggacatgc ggatcaccgg caccgcgatg ttctcgtggc
     1321 tctccgacga ggtgggggcg gcgtcggccg gagcggtggt gacccaggtc gacatcagcc
     1381 agtacaagtc gatcgacctg tcgtcgctgc gggacctgct gaccccgcag tacatcgaga
     1441 cgatcccggt gctggacggc tggaagaagg actaccagta cttcctcgat cccaacaatc
     1501 cgctcaatca gcaggtgatg gcgatcggca gcggcggcag ggaccggagc acggtctccg
     1561 gctcctacac ggtggcgggg ttcgatccga ccgactacga ccaggacatc ctctgggcgg
     1621 acgggttctt cgtacgctgg ccccagaagt agatattctt cccggatgcg ccgccggtcc
     1681 gccgcgattc cgccagccgt tctcgcggcg ggctggctcc tgagcctgct cgcgcccctg
     1741 ctgtctccgg cgcgggcgct ggcgaaccgc gacatctcgc tgttccacct gccgttgcgc
     1801 gcggcgttcc gggacctcgc cgcccatggg ctccccacct ggaacccatg gctgaacggc
     1861 gggcagccgc tgctctcgaa ccccagctac gcggccttct atccgccgag ctggctggtg
     1921 ttcgcggtgc cgccccacta cctgttcagc gtgctcgcct tcctgcacgg ggcgatcgcc
     1981 ttcgcgggcg cctggcggc
//
LOCUS       DATIFF010000982         1173 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1659331, whole genome shotgun sequence.
ACCESSION   DATIFF010000982 DATIFF010000000
VERSION     DATIFF010000982.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1659331"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            215..>1173
                     /locus_tag="VLD58_14310"
     CDS             215..>1173
                     /locus_tag="VLD58_14310"
                     /inference="COORDINATES: protein motif:HMM:NF013179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSB55529.1"
                     /translation="MESSAAERIEAVPGSHPQRIGRASLPSQRTLLTWLFVGRLVLAL
                     AALLGASLIWTRRPDVSFISSIAVVFALTLTAYGAWMVFVRRAIPSRAFLQIQALVDL
                     GLVTALVQLSGEPKSAFPALYVLVVAAYTMLLPLGAGVFTALAASLMFLGDVVWGQST
                     IPDTAFWIQFAVFNVVFLLVALLSHRLREAGAEQASLETELTRVRLEADDILHNIRSG
                     VLTVDGLGRLAFINPTAERLLRLDSSVFMGQPVLDQLKTRSAELWSAIATGIRNGRKI
                     SRGEGLVASAQGRQFPIGLSTTVFQQKAQETPSVTAIFTDISDL"
BASE COUNT          157 a          400 c          394 g          222 t
ORIGIN      
        1 tacaatgcgg gtatatcccg ggttgaccgg tgggccggga agaacggcat ggacgatccc
       61 gaagtgttcg ccgagcgcat ccccttcgtg gagacgcgcg actacgtccg gatcgtgcag
      121 cggaaccgcg acctctaccg ggtgctgtac ggatggtgaa gcgcttcgtt atcttgccgc
      181 tcgtccccct gctcaaacct tgcgccgagg cacgatggaa tcttccgccg cggagcggat
      241 agaagcggtc cccggttctc atccgcagcg gatcggccgg gcttctctcc ccagtcagcg
      301 cacgctgctc acatggctgt tcgtcggccg gctcgtcctt gccctggcgg cgctgttggg
      361 cgcctccctg atctggacgc gccgccccga cgtctccttc atcagcagca tcgccgtcgt
      421 cttcgcgctc accttgacgg cgtacggggc ctggatggtg ttcgtccgcc gggccatccc
      481 gagccgggcc ttcctccaga ttcaggcgct ggtggatctg gggctggtga ccgcgctggt
      541 ccagctctcg ggcgagccca agtccgcgtt tccggcgctc tacgtgctcg tggtcgcggc
      601 gtacacgatg ctgctgccgc tgggcgcggg cgtcttcacc gcgctggcgg catcgctgat
      661 gttcctcggc gacgtggtgt ggggccagtc gaccatcccg gacacggcgt tctggatcca
      721 gttcgcggtg ttcaatgtgg tgttcctgct ggtcgccctg ctgagccacc ggcttcggga
      781 ggcgggggcg gagcaggcgt cgctggagac cgagctcacc cgcgtgcggc tcgaggcgga
      841 tgacatcctg cacaacatcc gctccggcgt gctcacggtg gacggcctcg gccgcctcgc
      901 cttcattaat ccgacggcgg agcggcttct gcgcctcgat tcgagcgtgt tcatgggcca
      961 gccggtactg gaccagctca agacccggtc ggccgagctg tggtcggcga tcgccaccgg
     1021 catccggaac ggccgcaaga tcagccgggg cgaggggctc gtcgcgtcgg cccagggccg
     1081 ccagtttccc atcgggctca gcaccacggt cttccagcag aaggcacagg agacgccgtc
     1141 ggtgacggcg atcttcaccg acatctccga cct
//
LOCUS       DATIFF010000983         1712 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1813821, whole genome shotgun sequence.
ACCESSION   DATIFF010000983 DATIFF010000000
VERSION     DATIFF010000983.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1712
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1813821"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1339
                     /locus_tag="VLD58_14315"
     CDS             <1..1339
                     /locus_tag="VLD58_14315"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HSB55530.1"
                     /translation="ATKPTQYRVDGGWRPLRVEEERYLDPHGAVLAIDTLRFTHRGPM
                     TRSGTEWRSLRWTVLESGRELAAFSSAARAETASGFLDSMARFQAPAQNFLVADRQGT
                     IAIRSTGRLPLRPGGRGDVAQRGDTSASDWTGQWSLAELPQSGNPAQGYLASANQQPI
                     DPRVDGRYLRADWLAPWRAMRINQLLRTDSAVTPDAMRRFQTDPVSAAAQLFVPALLA
                     AGKKYGSDETVRRATTLLAEWDLRYTPDNTRAVLYESAMRQLTLLLWDELDSLPPPEN
                     SVTAALLADPQSTWWDDHRTAEVEDRDRLLARALAQGLTETIKARGEPDAGGWRWDRI
                     RHANIYHLLRIPALSALEIPIQAGQSTLNPSSGRGNYGPSWRMVVELGPEVRAWGTYP
                     GGQSGNPGSSRYLSGLRRWQEGTLDTLRFPRSVEQLGLQESSRLTLEPEKSRR"
     gene            1336..1668
                     /locus_tag="VLD58_14320"
     CDS             1336..1668
                     /locus_tag="VLD58_14320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55531.1"
                     /translation="MIEFLLLMVGFGVGTSLAGWWGVAAIAAGWSLLRRGPAWKPGAA
                     AAVTWATLLAFTVSWAPLSRLAPRVGAAVGVPGWAFVLLTPLCALLLGWSAARIAGAV
                     LPGAARDA"
BASE COUNT          249 a          591 c          607 g          265 t
ORIGIN      
        1 cgcgacgaaa cccacccagt accgggtgga tggcggctgg cggccgttgc gggtggagga
       61 ggagcgctac ctcgatccgc atggtgcagt gctcgcgatc gacaccctgc ggttcaccca
      121 ccgcggtccg atgacccggt ccggcaccga gtggcgctcg ctccgctgga cggtgctcga
      181 atcgggccgc gagctcgccg ccttcagttc cgcggcccgg gccgagaccg ccagcgggtt
      241 cctcgattcg atggcgcgct tccaggcccc ggcgcagaac tttcttgtgg ctgatcgtca
      301 gggcaccatc gcgatccgct cgaccgggag gcttccgctc cggccgggcg ggcgggggga
      361 cgtggcacag cggggcgata cttcggccag tgactggacc ggacagtggt ccctcgccga
      421 attgccccag tccggcaacc cggcgcaggg ctatctcgcg tcggccaacc agcagccgat
      481 cgatcccagg gtggatgggc gctatctccg ggccgattgg ctcgccccct ggcgggcgat
      541 gcggatcaac cagctgctcc gcaccgacag cgcggtgacc cccgacgcga tgcgaaggtt
      601 ccagaccgat ccggtcagcg ccgccgccca gcttttcgtg ccggcgctgc tggccgcggg
      661 gaagaagtac ggcagcgatg agaccgtacg ccgggccacg accctgctgg ccgaatggga
      721 cctccgttac accccggaca acacccgcgc ggtgctgtac gagagcgcca tgcgacagct
      781 gacgctgtta ctctgggatg agctcgacag cctgccaccg ccggagaact cggtgacagc
      841 ggcgctgctg gccgacccgc agagcacctg gtgggacgat catcgcaccg ccgaggtgga
      901 agaccgcgac cgactgctgg cccgcgccct ggcgcagggc ctgactgaaa cgatcaaggc
      961 gcggggcgag cccgatgccg gaggctggcg ctgggaccgg atccggcatg cgaacatcta
     1021 tcacttgctc cggattccag cgctgtcagc cctggagatc ccgattcagg cggggcagtc
     1081 caccctgaac ccgtcgagcg gccgcgggaa ctacgggccg agctggcgga tggtagtgga
     1141 actcggccca gaggtccggg cgtggggaac ctaccccgga gggcagtcgg gcaatcccgg
     1201 gagttcacgc tatctcagcg gtctgcgccg ctggcaggag ggaacgctcg ataccctccg
     1261 gttcccccga tcggtggagc aactgggtct gcaggaatcg agtcggctca ccctcgaacc
     1321 cgagaagtcc aggcgatgat cgagtttctt ctcctgatgg tggggttcgg ggtcgggacc
     1381 tcgctggcgg ggtggtgggg cgtggcggcg atcgccgccg ggtggagcct cctccggcgc
     1441 ggtcctgcgt ggaagccagg cgcggcggcc gcggtcacct gggccaccct cctggcattc
     1501 accgtctcgt gggcaccgct cagccgtctc gcgccccggg tgggggccgc ggtgggtgta
     1561 ccgggatggg ccttcgtgct cctcacgccg ctgtgcgcct tgctcctggg ctggagcgcg
     1621 gcccgcatag cgggtgcagt cctcccgggt gccgcgaggg atgcctgacc catcccgatc
     1681 ctctggcaag gctcacttcc cccccacttt ca
//
LOCUS       DATIFF010000984         1270 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_737850, whole genome shotgun sequence.
ACCESSION   DATIFF010000984 DATIFF010000000
VERSION     DATIFF010000984.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1270
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_737850"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..315
                     /locus_tag="VLD58_14325"
     CDS             <1..315
                     /locus_tag="VLD58_14325"
                     /inference="COORDINATES: protein motif:HMM:NF024869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HSB55532.1"
                     /translation="AWPEEAFRQVGIDDVTFVCVLSHDPKFDEPAIQLALRSPAAYVG
                     AIGSSTTQADRRARLRSAGFTEAEIARLHGPIGLDLGGRHPAEIALAILAEMTAVRYG
                     KR"
     gene            330..>1270
                     /locus_tag="VLD58_14330"
     CDS             330..>1270
                     /locus_tag="VLD58_14330"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSB55533.1"
                     /translation="MGQALEGLTVLDLTQLLPGPVAGMLLGDFGADVIKVEPPGGDPA
                     RAHGATPDAPGPVFRAVNRNKRGLALDLSRPEGRDVLLRLVDRADVLLEGFRPGVLPR
                     LGLGWEVLASRNPHLIYCAITGYGQDGPCAGVAGHDLNYMARSGVLGLNAAKAGPPVI
                     PGIQVADLSAGSLNAVIGVLLALQARERTGRGQMVDIAMLDGVFALMLLPLLRQLQDQ
                     VEPLPGADTLSGRYACYRIYETGDGRHAVLGALEPKFWANACQVLGRPDLVGRQFAEG
                     EEQEAMQAEVASIFRAKTAAEWAAAFADRDACFSVVQS"
BASE COUNT          176 a          437 c          461 g          196 t
ORIGIN      
        1 gcctggcccg aggaggcctt ccgccaggtc gggatcgatg acgtgacctt cgtctgcgtg
       61 ctctctcacg atcccaagtt cgacgagccg gcaatccagc tggcgctgcg gtcgcccgcc
      121 gcctacgtcg gcgcgatcgg ctccagcacg acgcaggcgg atcgtcgcgc ccggcttcgc
      181 tcggccgggt tcaccgaggc cgagatcgcc cggctgcatg gcccgatcgg cctggacctg
      241 ggggggcgcc acccggcgga gatcgccctc gccatcctgg ccgagatgac ggcagtgcgg
      301 tacgggaagc gctgaggcgg aaggaaccca tgggtcaggc gctcgaaggg ctgacggtcc
      361 tcgacctgac ccagctgctt cccggcccgg tggccggcat gctgctcggc gacttcggcg
      421 ccgacgtcat caaggtcgag ccaccgggcg gtgatcccgc ccgggcccat ggcgccaccc
      481 ccgacgcccc aggtccagtc tttcgcgccg tcaatcggaa caagcggggc ctcgcgctcg
      541 acctcagtcg ccctgaagga cgcgacgtgc tgctgcggct ggtggaccgg gccgacgttc
      601 tgttggaggg attccggccc ggggtgttgc ccaggctcgg gctcgggtgg gaggtgctgg
      661 cgtcgcggaa tcctcacctg atctactgcg cgatcaccgg ctacggtcag gatggaccct
      721 gtgccggggt ggcagggcac gacctcaact acatggcgcg gtcgggcgtg ctgggtctca
      781 acgcggcgaa ggctgggcct cccgtcatcc ccgggatcca ggtcgcggac ctgtcggccg
      841 gatcgctgaa cgcggtgatc ggagtcctgc tggcgctgca ggcccgggag cggacggggc
      901 gcgggcaaat ggtcgacatc gccatgctcg acggcgtttt cgccctgatg ctcctgcccc
      961 tgctccgcca gctgcaggac caggtggagc cactcccggg cgccgacacc ctgagcggcc
     1021 gttacgcctg ctaccggatc tacgagaccg gcgacgggcg ccatgccgtc ctgggcgccc
     1081 tggagcccaa gttctgggcc aatgcctgcc aggtgctggg ccggccggac ctggtcggcc
     1141 ggcagttcgc cgaaggagaa gagcaggagg cgatgcaggc ggaggtcgca tccatcttcc
     1201 gcgccaaaac cgcggcggag tgggccgcag cgttcgcgga cagggacgcc tgtttctcgg
     1261 tggtgcagtc
//
LOCUS       DATIFF010000985         4404 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1968878, whole genome shotgun sequence.
ACCESSION   DATIFF010000985 DATIFF010000000
VERSION     DATIFF010000985.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4404
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1968878"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1754)
                     /locus_tag="VLD58_14335"
     CDS             complement(<1..1754)
                     /locus_tag="VLD58_14335"
                     /inference="COORDINATES: protein motif:HMM:TIGR01494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HSB55534.1"
                     /translation="MRPRITPPPAGGPSPAWHELTPAEVARRLGTSLAAGLGTAEAQR
                     RLELAGPNQIDDGRRQPAIVIFLRQFTDIMVLVLAAAAVLAGVIGEPQDTIAIVAILL
                     LNALLGFFQEYRAERAVAALRAMASAPIGVRRDGHVLRVPVAQLVPGDLVLLEAGNLV
                     PADLRLVECHQLRIDESLLTGESFPVEKEAMVLNAGELLVDRRNSAWRGTVVTHGHGS
                     GVVVATGMDTELGRIAGLLSVAAPPATPLQQRLVRLGQRLAAGALAICGLVLLIGIVK
                     QEPFLPMLLTAVSLAVAAIPESLPAVVTVALALGARRMARQQALVRRLPAVETLGSVT
                     CICADKTGTLTLNRMRVESWWLPGESPGNLADTPARSRLLQALSLCQDVQVAAEGTLV
                     GEPTEVALVEAVLAEGVDPAEVRRRLPRSAEVPFTAERAFMSTMHRENRHTLVVTKGS
                     PERIVEASDRMLGRDGPIPVDAAAVLALSNRMAADGLRVLAVAERHLDGPPDPAAAGL
                     ESGLTLLGLVGLMDPPRPEAAAAVATCREAGIAVVMITGDHPGTARSIAARVGIPAGD
                     GEVLTGPELARLHPAQLA"
     gene            complement(1764..2621)
                     /locus_tag="VLD58_14340"
     CDS             complement(1764..2621)
                     /locus_tag="VLD58_14340"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016208 - AMP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSB55535.1"
                     /translation="MRVLCGTDFSPFSIDAGTIAALWARRAGGDLHLIHAVSRTTGLE
                     DSRARLLAEAQRLQGFGAEVSAVDLVNGEAEQVLAEEAIARRASLIVVGSLGERGRHG
                     RLAGTTADATARDAPIPVLVVREPGLLEQWLRGQGPLEVMVGFERGTSALGALRWAAD
                     LTGYGSVHPTVVHLVLPGAENREVHATGRGVGLTLAPEALDRLRVELQKAVTPSFGET
                     QIRLVVKECLGRKDVPLVLEADAAGAGLLVVGSHQRKGFRRWWSGSVSSGVLHAADMS
                     VVVVPSPAE"
     gene            2849..3529
                     /locus_tag="VLD58_14345"
     CDS             2849..3529
                     /locus_tag="VLD58_14345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013804409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSB55536.1"
                     /translation="MRILVVEDDAKVASFLTRALQEEGHDVDAAGDGETGASLAHLNQ
                     YDLILLDVQLPKRDGLQVAAELRRNNVPTPILMLTSRDTTQDVVRGLNAGADDYLTKP
                     FALEELLARVSALTRRQLGPASGILRFQDLEMDRLRRVVTRAGRTLDLAPREFRLLEY
                     FLLNPERAIGRSTLLEKVWDMSFDPETNVVDAHISNLRRKLEEGGHARLIQTVRGAGY
                     ALRVEGGA"
     gene            3531..>4404
                     /locus_tag="VLD58_14350"
     CDS             3531..>4404
                     /locus_tag="VLD58_14350"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HSB55537.1"
                     /translation="MRSFRLALALRSAGSMLTILVLLGVGTTIGLRALLYRQLDGTLL
                     HLAEVEAEAGAAQSGPDFAFHEGVLLATRTGAGEALTRYAQLWSSEGRPLVRSANLDR
                     DLTLPAGAVRRAESGAITWDTHHWAGQRIRCVVYPLSLVGAAHEHHLLEVAAPLAPLD
                     ATLRDFTLFGIALTLLGVGAAFAMGWRMAGVALRPTAEITAQAEAIREGTHSPRITAH
                     ADVDEFARLVRVLNEMLTRLDLALTIQRRFTADASHELRGPLTALRGELDLALKRERA
                     PAEYRDTLERCRGEV"
BASE COUNT          685 a         1590 c         1506 g          623 t
ORIGIN      
        1 tccgccagct gggccgggtg aagccgtgcc agctccggtc ccgtgagcac ctcaccatcg
       61 ccggcgggga tgccgacacg ggccgcaatc gagcgggccg tgccgggatg atccccggta
      121 atcatgacca ccgcgattcc cgcctcccgg cacgtggcaa ccgccgcggc ggcttccggc
      181 cgcggtggat ccatgaggcc aaccaggccg agcagggtca gtcccgattc cagtccggcc
      241 gccgccgggt cgggcggtcc gtcgaggtgc cgttcggcca ccgccaggac ccggagtccg
      301 tcggccgcca tgcggttcga cagcgccagc accgccgcag catccaccgg tatcggaccg
      361 tcccggccga gcatgcggtc agacgcttcc acgatccgtt ccggcgatcc cttggtcacc
      421 accagcgtgt gccggttctc tcgatgcatg gtgctcatga aggcccgctc ggccgtgaac
      481 ggcacctcgg cgctccgggg aaggcgccgc cgcacttcag ccggatcgac gccctcggcc
      541 aggaccgctt ccaccagcgc cacttcggtg ggttcgccca ccagggtgcc ctcggccgcg
      601 acctgcacat cctggcagag ggacagcgcc tggagcagcc gggagcgtgc cggggtgtcg
      661 gccaggttgc ccggcgactc cccgggcaac caccagctct ccacccgcat gcgattgagt
      721 gtgagggtcc cggtcttgtc ggcacagatg caggtgaccg atcccagcgt ctcgaccgcg
      781 gggagccggc ggaccagcgc ctgctgtcgc gccattcggc gggcgcccag ggcgagcgcg
      841 acagtgacga cggcgggaag tgactccggg atggcggcga ccgcgaggct cacggcggtg
      901 agcagcatcg ggaggaatgg ctcctgcttc acgatcccga tcaggagaac cagtccgcag
      961 atcgccagcg ctccggccgc gagccgttga cccagccgta ccagccgctg ctggagtgga
     1021 gtagccgggg gcgccgcgac cgacagcagc ccggcgatcc ggcccagctc ggtgtccatc
     1081 ccggtcgcaa ccacgacccc gctgccatgg ccgtgagtca cgaccgtgcc acgccaggcc
     1141 gagttccgcc gatccaccag cagctcgccg gcattgagca ccatcgcctc cttctccacc
     1201 gggaaggact ccccggtcag gaggctctcg tcgatccgca gctggtggca ctccaccagg
     1261 cggagatcgg ccggcaccag gttccccgcc tccagcaaca ccaggtcccc cgggacaagt
     1321 tgggcaacgg ggacccgcaa cacgtgacca tcgcgccgca cgccgatcgg cgccgaagcc
     1381 atcgcgcgga gggccgccac ggcccgctcg gctcggtact cctggaagaa gccgagaagg
     1441 gcgttgagca ggaggatggc aacgatggcg atggtgtcct gcggctcccc gatcaccccg
     1501 gcgagcaccg ccgcggccgc cagcacgagg accatgatgt cggtgaattg ccgcaggaag
     1561 atgacaatgg ccggctggcg cctgccgtca tcgatctggt tgggaccggc gagctcgagg
     1621 cgccgctgtg cctccgcggt gccgaggccg gcggccaggg aggttcccag tcgccgggcc
     1681 acctcggcgg gagtcagctc atgccatgcg ggtgaaggac cgccggcggg aggcggcgtg
     1741 atacggggcc gcatcgagcc gcctcattcc gccggactcg gcaccacgac cacgctcatg
     1801 tccgccgcgt gcagcacccc gctcgagacc gaaccactcc accagcgccg gaagcctttg
     1861 cgctggtggc ttcccaccac cagcaggccg gcgccggcgg catccgcctc cagcaccagc
     1921 ggcacgtcct tgcggcccag gcattctttg accaccagac ggatctgagt ctccccgaaa
     1981 ctcggcgtca ccgccttctg gagctcgacc cggaggcgat ccagcgcctc gggtgcgagc
     2041 gtgagcccca ctccacgacc ggtcgcatgg acctcgcgat tctccgctcc gggcaggacc
     2101 aggtggacaa cggtaggatg gacgctgccg tagccggtca ggtccgcggc ccagcgaagt
     2161 gcgccgagcg cgctggttcc ccgctcgaac ccgaccatca cctcgagggg cccctggccg
     2221 cggagccact gttcgaggag gcccggctcg cgcacgacca ggaccggaat cggggcgtcg
     2281 cgagccgtcg catcggcggt ggtccccgcc aggcgaccgt gccggccacg ctcgcccagt
     2341 gagccgacca caatcaggct ggcccgccgt gcaatggcct cctcggcaag cacctgctcg
     2401 gcctccccgt tcaccaggtc tactgcgctc acttccgccc cgaaaccctg cagtcgttgc
     2461 gcctcggcca gcagccgggc gcggctgtcc tcgaggccgg tggtccggga aacggcgtga
     2521 atcaggtgca ggtcaccgcc ggcccgccgg gcccacagcg cggcgatggt cccggcatcg
     2581 attgagaagg gggagaaatc agtgccacag aggactcgca tatcgtgtca cctcccgggg
     2641 taccacgggg gccagccgga gtcggtcaag cgcgctggtc ctgagtaccc aggatgagag
     2701 ttagccatac cctgacgaat cgggactgaa gccgtggtga aggtgcgctc agacaagata
     2761 gggtggtgtg tcacccttcc gggctgccgg cttgcccagc cgcggaccgg gctagacttt
     2821 cccttcccac ggcaagaccg gagcccggat gcgcattctg gtggtggagg acgatgccaa
     2881 ggtggccagc ttcctgacgc gcgcgctgca ggaggagggg cacgacgtgg acgctgcggg
     2941 cgacggggaa accggcgcca gcctggcgca cctcaaccag tacgacctca tcctgctgga
     3001 tgtgcagctc cccaagcgcg atgggctgca ggtggcggcc gagctgcggc ggaacaacgt
     3061 gccgacgccg atcctcatgc tcacctcgcg ggacaccacc caggacgtgg tgcgcggctt
     3121 gaacgccgga gccgacgact acctcaccaa gccatttgcg ctggaggaac tgctggcgcg
     3181 ggtgagcgcg ctgacccgcc gccagctcgg gccggcctcg ggaattctcc gcttccagga
     3241 tctcgagatg gaccggctgc ggcgggtggt gacgcgcgcc ggccgcaccc ttgacctggc
     3301 gccgcgcgag ttccggctgc tggagtactt cctgctgaat cccgaacgcg cgatcgggcg
     3361 ctctaccctg ctggagaagg tctgggacat gtcgttcgat ccggagacca acgtggtgga
     3421 cgcccatatc tcgaatctcc ggcgcaagct ggaggaaggt ggccacgccc ggctgatcca
     3481 gacggtgcgc ggcgcggggt acgcgctccg ggtggagggc ggggcctgac atgcgctcgt
     3541 tccggctggc cctggctctc cgcagtgccg ggagcatgct caccatcctg gtcctgcttg
     3601 gagtgggcac gactatcgga ctccgggccc tgctctaccg tcagctcgat gggaccctcc
     3661 tccacctggc cgaggtggag gcggaggcgg gcgcggccca gtcgggaccc gacttcgctt
     3721 ttcacgaagg ggtccttctc gcaacccgca ccggcgccgg tgaggcgctc acccgttatg
     3781 cccagctctg gagcagcgag ggccggccac tggtccggag cgccaacctg gaccgcgacc
     3841 tgacgctgcc ggccggcgcc gtgaggcggg ccgagtccgg ggccatcacc tgggacaccc
     3901 accactgggc gggccagcgt atccgctgtg tcgtgtatcc cctcagcctc gtgggcgcgg
     3961 cccacgaaca ccacctgctc gaggtcgccg cgccactcgc ccccctcgac gcgacactcc
     4021 gggatttcac cctgttcggc attgccctca ccctgctcgg ggtgggggcg gcgttcgcga
     4081 tgggctggag aatggcaggc gtagcgctcc gtcccacggc agagatcacg gcgcaggccg
     4141 aggcgatccg ggagggaacc cactcgcctc gcatcactgc ccatgccgac gtggacgagt
     4201 ttgcgcggct ggtgcgagtg ctgaacgaga tgctcacccg cctcgacctg gcgctcacca
     4261 tccagcgccg cttcaccgcc gacgcaagtc acgagctgcg tggcccgctc accgcgctgc
     4321 ggggcgagtt ggatctggcg ctcaagcggg aacgggcccc ggcggagtat cgcgacacgc
     4381 tcgaacgctg tcgcggcgaa gtca
//
LOCUS       DATIFF010000986         1029 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_429293, whole genome shotgun sequence.
ACCESSION   DATIFF010000986 DATIFF010000000
VERSION     DATIFF010000986.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429293"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            162..674
                     /locus_tag="VLD58_14355"
     CDS             162..674
                     /locus_tag="VLD58_14355"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: protein motif:HMM:NF012413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HSB55538.1"
                     /translation="MTQVSLIAAMAENRVIGRAGGLPWHLPDDLQHFKKLTVDHTVIM
                     GRKTFDELKGRPLANRRNVVITRNRGFHPHGVTVVPNLAEALALGATEREVFVIGGGE
                     IFREAMPVADRLYLTIVHAEVDGDTWFPEYDRDGWVLEEEEQHPADTRHAYAFTFRTY
                     RRLRATPRAG"
     gene            complement(720..>1029)
                     /locus_tag="VLD58_14360"
     CDS             complement(720..>1029)
                     /locus_tag="VLD58_14360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55539.1"
                     /translation="RADRFLRRIWQTVESMPRYRGRTALLVATDHGRGAEDDWTDHGR
                     KVPAAERIWMAGLGTEMPATAGRVSQAQFAATIAAVLGLEAAFRKARPEAAPSIFPPQ
                     "
BASE COUNT          151 a          369 c          351 g          158 t
ORIGIN      
        1 aaccacctgg agcaggtgaa ggagcagctg tcgcgaacac cgcgcccctt gccgaggatg
       61 cggctcgatc cgtcggtgcg gaccctcgag gggttccgct tcgccgattt caccctcgag
      121 gcctacgatc cccacccggc catccgggcg ccggtggcgg tgtgacgcag gtttcgctca
      181 tcgcggcgat ggcggagaac cgcgtgatcg gccgcgccgg cggcctcccc tggcaccttc
      241 ccgacgatct ccagcacttc aagaagctga ccgtggatca cacggtcatc atggggcgga
      301 agaccttcga cgagctcaag gggcgtccgc tggccaaccg gcggaacgtg gtcattacca
      361 ggaaccgcgg cttccatcct cacggcgtca cggtggtccc gaatctggcg gaggcgctcg
      421 ctctcggggc caccgaacgg gaggtgttcg tcatcggcgg gggagagatc ttccgcgagg
      481 cgatgccggt tgccgaccgg ctttacctga cgatcgtgca cgccgaagtg gatggggata
      541 cctggttccc ggagtacgat cgggacgggt gggtgctgga ggaggaggaa cagcaccccg
      601 ccgatacgcg ccacgcctac gccttcacct tccgcaccta ccgcaggctc cgggctactc
      661 ctcgcgcagg gtaaccgccg gatcgatccg ggccgcgccc gcggcccacc cgccggccat
      721 cattggggcg ggaagatgga cggcgccgcc tcgggacggg ccttccggaa cgccgcctcc
      781 agcccgagta ccgccgcgat cgtcgccgcg aactgggcct ggctcacccg tcccgcggtc
      841 gctggcattt ccgtgccgag tcccgccatc cagatccgct ccgccgcggg caccttccgg
      901 ccatggtcgg tccagtcgtc ttccgcgccc cggccgtggt cggtggccac gagcagcgcg
      961 gtccggccgc ggtagcgggg cattgactcg accgtctgcc agatgcgccg gaggaagcgg
     1021 tcggccctc
//
LOCUS       DATIFF010000987         1878 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_429299, whole genome shotgun sequence.
ACCESSION   DATIFF010000987 DATIFF010000000
VERSION     DATIFF010000987.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1878
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429299"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..540
                     /locus_tag="VLD58_14365"
     CDS             <1..540
                     /locus_tag="VLD58_14365"
                     /inference="COORDINATES: protein motif:HMM:NF044325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E/G"
                     /protein_id="HSB55540.1"
                     /translation="NLEAAREIARQIRLRDIGGIIVCDFIDMETRGNRDKVLQELRTH
                     LGRDRARTKALAVSELGLVEMTRQRVRPSLWHSMTTECPTCGGSGRVFTPEVVARRLE
                     RAIRRVGHERREPQISVRLHPEVALYLLEEEPKLLQQLQKATGIDLELRDDPMMRLDE
                     FRLMSRPAGRDVTEHYAVA"
     gene            619..933
                     /gene="rplU"
                     /locus_tag="VLD58_14370"
     CDS             619..933
                     /gene="rplU"
                     /locus_tag="VLD58_14370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HSB55541.1"
                     /translation="MYAIFRAAGKQFRAEKGKTLRLPRIAAEPGTKLTFDEVLLASDG
                     ETVRAGTPLVKGASVTAEVVAEGKEPKIYVFKFKRRKNYRRKTGHRQHFTEVRVTGLK
                     LG"
     gene            941..1213
                     /gene="rpmA"
                     /locus_tag="VLD58_14375"
     CDS             941..1213
                     /gene="rpmA"
                     /locus_tag="VLD58_14375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HSB55542.1"
                     /translation="MAHKKGVGSSRNGRNSNPQYLGVKRYGGEVVSAGSIIVRQRGTR
                     FHPGRNVRRANDDSLFALVDGVVKFEFKDKNRQKISIYPVAAASAS"
     gene            1305..1568
                     /locus_tag="VLD58_14380"
     CDS             1305..1568
                     /locus_tag="VLD58_14380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55543.1"
                     /translation="MAQLFDRLNQELETFGKRAQAALDEGKLQIELLRHRRQQDRAAR
                     ELGLLIHRRERGGDVDQRRIDAALLRLDDLAAEITRLEAADAR"
     gene            complement(1565..>1878)
                     /locus_tag="VLD58_14385"
     CDS             complement(1565..>1878)
                     /locus_tag="VLD58_14385"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /protein_id="HSB55544.1"
                     /translation="VARLGHRRPGLPRGVLLSAYLADTVSAMHAVGATTLWQEWHFID
                     EDLVRTVHAAGLAVVAWTVNELADLRRLAQLGVDGLCGNYPDRIRVAIGLGAGAQAPE
                     L"
BASE COUNT          332 a          636 c          651 g          259 t
ORIGIN      
        1 aacctggaag cggcgcgcga gatcgcccgc cagatccgcc tgcgcgacat cggcggcatc
       61 atcgtctgcg atttcatcga tatggagacc cggggcaacc gcgacaaggt gctccaggag
      121 ctgcgcaccc acctcggccg agaccgggcc cgcaccaagg cgctggccgt ctcggagctc
      181 gggttggtcg agatgacccg gcagcgggtg cgcccgtcct tgtggcactc gatgaccacc
      241 gaatgcccca cctgcggcgg gtccggccgg gtgttcaccc ccgaagtcgt ggcccggcgg
      301 ctggagcggg cgatccggcg ggtcgggcac gagcggcgag aaccgcagat ctccgtgcgg
      361 ctccaccccg aggtcgcgct ctacctcctg gaagaggagc ccaagctgct ccagcagctg
      421 cagaaggcga ccgggatcga cctggagctt cgggacgacc ccatgatgcg gctcgacgag
      481 ttccggctga tgagccggcc ggccggacgc gacgtgaccg agcactacgc ggtggcctga
      541 gccggccacc cttgcccaaa ccgcttctgc cgactacact tccgggctct tgacgaaccc
      601 ttaggcaggt agcaacccat gtacgccatc ttccgggccg cgggcaagca gttccgcgcc
      661 gaaaagggca agacgctccg cctcccccgc atcgccgcgg agccgggcac caagctcacc
      721 ttcgacgagg tattgctcgc gtcggacggt gagaccgtgc gggccggcac gccgctggtg
      781 aagggcgcct cggtcaccgc cgaggtcgtg gccgagggca aggagcccaa gatctacgta
      841 ttcaagttca agcgccggaa gaactaccgc cggaagaccg gccaccggca gcacttcacc
      901 gaggtccggg tgaccggcct caagctcggc tgaggatagg atggctcaca agaagggtgt
      961 cggctcgagc cggaacggcc ggaacagcaa cccgcaatat ctcggcgtga agcgctacgg
     1021 cggcgaagtc gtgagcgccg gaagcatcat cgtgcgccag cgcggcaccc ggttccaccc
     1081 gggaagaaac gtgcgccgcg ccaacgacga ctcgcttttc gcgctggtgg acggcgtggt
     1141 gaagttcgag ttcaaggaca agaaccggca gaagatatcg atctatccgg tggcggcggc
     1201 gtcggcctcc tgacgcccgg ctgagccggt ggctgtcgac ggtggggtgc ggaactggtt
     1261 ccgcacccca ctcgtgtttt atttgaggac gggaggatca catcatggca cagctcttcg
     1321 accggctcaa ccaggagctg gaaacgttcg gcaagcgcgc ccaggcggcg ctcgacgaag
     1381 gcaagctcca gatcgagctg ctccggcacc gccggcagca ggatcgcgcg gcgcgtgagc
     1441 tggggctcct gatccaccgg cgggagcggg gtggggatgt tgaccagcgg cggatcgacg
     1501 cggcgctgct ccggctcgat gatctggccg ccgagatcac ccggctggag gcggcggacg
     1561 cccgctagag ctccggtgcc tgcgctccgg cgccgagccc gatcgccaca cggatccgat
     1621 cgggatagtt gccgcagagc ccatctacgc cgagctgagc gaggcgccgg aggtcggcca
     1681 gctcgttcac cgtccaggcc acgacggcaa gccccgcggc gtgaacggtg cggaccagat
     1741 cctcgtcgat gaagtgccac tcctgccaga gcgtcgtggc gccgaccgcg tgcatcgcgc
     1801 tcaccgtatc cgccagatag gcggacagga gcacaccgcg cgggaggccg ggacgcctgt
     1861 gcccgaggcg tgccacca
//
LOCUS       DATIFF010000988         3399 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1968983, whole genome shotgun sequence.
ACCESSION   DATIFF010000988 DATIFF010000000
VERSION     DATIFF010000988.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3399)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3399)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3399
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1968983"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..707)
                     /locus_tag="VLD58_14390"
     CDS             complement(<1..707)
                     /locus_tag="VLD58_14390"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSB55545.1"
                     /translation="MDVSRPWLHAYGDVPHSIAYPEITLYDAVMATVRRVPDSVAFDF
                     LGCTATYRELGSLIDRAADGFAALGMRAGDRIMIALPTSPQGVAAFYAAIRIGAVPVM
                     IHPLSTAPEIARLLELSRSRFALTLDALYERFAAAIGRTPLETLILTRLPDALTPLKA
                     LGFWFVQGRKIPRVPGDARVRWWRDLINRAHPPAPPSRAGTNDLAAILFSGGTLGTPR
                     GIMLSHRNFISDGMQLAA"
     gene            860..>3399
                     /locus_tag="VLD58_14395"
     CDS             860..>3399
                     /locus_tag="VLD58_14395"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB55546.1"
                     /translation="MAPLPDSLVTALADHYVLERELGQGGMAKVYLAQDLKHRRLVAL
                     KVLHAQRAPALAAQRFRREIELVARLQHPHILPVFDSGDTEGHLWFTMPYIEGGSLRE
                     RIRREERLPLDEALRLATQLCRTIDYAHRQGIVHRDIKPANILLTKDGDPLVADFGIA
                     RALEPSPHFRADLTDTGAPIGTPAYMAPEQASADTPVDARADQYALAVTIFEMLSGQL
                     PVTAQTPAGLIAQLLGGAPSIRIHREDVPANVDEALARAMALDPRERFDSVASFGRAL
                     GDGTTTVTPARRVLRRVPAWLALPLVAVIGVLLFRRGTAPPPEAGDGTPVIAVLPFDY
                     QGDSTDAYFADGVADEVRSKLMRIGGMTVIARASSIEYRHSSKRPEVIARELGADYLL
                     TGTLQWQKGDSGQSRVRVRPELMQVDRGQVPRTRWGEQFDVPVTDVFDMQTDIAERVA
                     ARLDLGLADSVSRQIAVPPTTNLQAYDAYLRGLHLDEEQYAADPATIRRAIRLFEQAV
                     ALDSTFAPAWARLAASRVWLYGNTVPTRESMMQARTAAERAIRLDPRAAAGRAALGFY
                     YAIVEHDNRRARAEYQAALWFDPEDAVTLRRLATAEQSLGQWDSALVHAQGASRLDPR
                     SIGSAIRLAWILRVLRRTAEARAIMDRTLVRAPTNLVAVEERVLDDLADGNLPGARGV
                     VRSVPAETEPAALVAYLASYQDLYWVLDDNHRRLLLTLTPAEFDGDRATWALVRAETY
                     WLQGDSVRMRSYADTARLEFARQRRVAPTDPQRLVLSGLALAFGGRSPTGIALAEKGV
                     ALMPIERDQINGSYLLHLLARVYVVAGQPDKAIAVIGRLLKLPYDLTPG"
BASE COUNT          526 a         1198 c         1176 g          499 t
ORIGIN      
        1 gccgccagct gcatgccgtc gctgatgaaa ttgcgatgcg acagcatgat ccccctcggg
       61 gtccccagcg tccctccgga gaagaggatc gctgcgagat cattggtgcc ggccctggat
      121 ggcggcgcgg gcggatgcgc ccggttgatg agatccctcc accatcgcac ccgcgcgtca
      181 ccgggtaccc gtgggatctt ccgtccctgg acgaaccaga atcccagcgc cttgagtggc
      241 gtgagcgcat ccgggagccg ggtgaggatg agggtctcga gcggggtccg gccgatggcc
      301 gcggcaaagc gttcataaag cgcatcgagg gtcagcgcga accgcgagcg gctgagttcc
      361 agcagccgtg cgatctcggg cgcggtggag agcgggtgaa tcatcaccgg caccgcgccg
      421 atcctgatgg cggcgtagaa cgcggccacg ccctggggtg aagtcggcag cgcgatcatg
      481 atccggtcac cggcgcgcat ccccagcgcg gcaaagccat cggccgcgcg gtcgatgaga
      541 ctgcccagtt cacgataggt cgcggtgcac cccagaaaat cgaaggccac gctgtcgggc
      601 actcgccgga ccgtggccat gactgcgtcg tacagcgtga tctcgggata ggcgatggaa
      661 tggggaacat cgccgtaggc atggagccag ggtcgggaaa cgtccatatc tcctcgccca
      721 gcagagtcgg ttaggcaatg tcgtccggcg acactgaagg atggctgaga ctgcggtgag
      781 gaggccgggg ccagccacga gcccggcctg cccggggggt ggtcgcgcga aggccaggtt
      841 gaccgcatct tccatccccg tggccccact tcctgacagc ctcgtcaccg ccctggccga
      901 ccactatgtc ctcgagcgcg agctcgggca gggcggcatg gccaaggtgt accttgccca
      961 ggatctcaag caccgccgcc tggtggcgct caaggtgctc cacgcccagc gcgcgccggc
     1021 gctcgcggcc cagcggttcc ggcgggagat cgagctggtg gcccggctgc agcaccccca
     1081 tatcctgccg gtcttcgatt cgggcgacac cgagggccac ctctggttca cgatgcccta
     1141 catcgagggg ggctccctcc gggaacggat ccggcgggaa gagcggctgc cgctcgacga
     1201 ggcgctccgg ctcgcgaccc agctctgccg caccatcgat tacgcccacc gccagggcat
     1261 cgtccaccgt gacatcaagc cggccaatat cctgctcacc aaggacggcg atcccctggt
     1321 cgcggacttc ggcatcgcgc gcgccctgga gccatcgccc cacttccgcg ccgacctgac
     1381 cgacaccggt gccccgatcg gcaccccggc ttacatggcg ccggaacagg cctcggcgga
     1441 cacgccggtc gatgcccggg ccgatcagta cgccctcgcg gtcacgatct tcgagatgct
     1501 ctccgggcag ctccccgtca ccgcgcagac gccggccggc ctcatcgcgc aactgctcgg
     1561 tggcgcgccg agcatccgga tccaccgcga ggatgtgcct gccaacgtgg acgaggcgct
     1621 ggcgcgggcc atggcgctcg atccacggga acggttcgac tcggtggcga gcttcgggcg
     1681 agccctgggc gatggcacca ccacggtgac tccggccaga cgcgtcctcc ggcgagtccc
     1741 cgcctggctc gccctcccgc ttgtggcagt catcggcgtg ctgctcttcc gcagggggac
     1801 agcgcctcct cccgaggccg gggacggcac gcccgtcatc gccgtgctcc ccttcgatta
     1861 tcagggagac tccaccgacg cctatttcgc cgacggcgtg gccgacgagg tccgcagcaa
     1921 gctcatgcgt atcggcggga tgacggtcat cgcacgggcc agctcgatcg agtaccgcca
     1981 cagcagcaag cgacccgagg tgatcgccag ggagctgggg gccgactacc tgctgaccgg
     2041 gacgctgcag tggcagaagg gggacagcgg gcagagccgg gtccgggtcc ggcccgagct
     2101 gatgcaggtg gatcggggcc aggtgccgcg cacccgctgg ggcgagcagt tcgatgtccc
     2161 ggtcaccgac gtcttcgaca tgcagaccga catcgcggaa cgggttgcgg cccggctcga
     2221 cctgggactg gccgacagtg tgagccgcca gattgccgtt cctcccacga ccaacctcca
     2281 ggcctacgac gcctatctac gcggcctcca cctggatgag gaacagtacg ccgccgatcc
     2341 ggccacgatc cgccgcgcga tccgcctctt cgaacaggcg gtggcgctgg actcgacgtt
     2401 cgccccggcg tgggcccggc tggccgccag ccgggtgtgg ctgtatggga acaccgtccc
     2461 gacccgggag agcatgatgc aggcgcggac cgcggcggag cgcgccatca gactagatcc
     2521 ccgcgctgcg gcgggccggg ccgcgctggg gttctactac gcgatcgtcg agcacgacaa
     2581 ccgccgggcg cgggccgagt accaggccgc gctctggttc gatcccgagg acgcggtcac
     2641 cctccgccgg ctggcgacgg cggaacagtc actgggccag tgggactccg ccctggtgca
     2701 cgcccagggc gccagccgcc tggacccacg ctcgatcggt tccgccatcc gcctcgcctg
     2761 gattctccgg gtcctccggc gcaccgccga ggcgcgggcg atcatggacc ggaccctggt
     2821 ccgggcgccc accaacctcg tcgcggtgga ggaacgggtc ctcgacgatc tggccgacgg
     2881 gaatctgcct ggagcgcggg gagtggtgcg atcggtgccg gccgaaaccg agcccgcggc
     2941 gctggtcgcc tatctcgcga gctatcagga cctctactgg gtgctggacg acaaccatcg
     3001 gcggctcctg ctcacgctca cgccggccga gttcgacggc gaccgggcaa cctgggcgct
     3061 ggtgcgggcc gagacctact ggttgcaggg cgactcggtc cggatgcgga gctacgccga
     3121 caccgcgcgc ctcgagtttg cccgccagcg ccgggtggcg ccgaccgatc cgcagcggct
     3181 ggttctctcg gggttggcgc tggcctttgg cgggcggagc ccgacgggta ttgccctcgc
     3241 tgagaaaggc gtcgccttga tgccgatcga gcgggaccag attaatggga gctacctcct
     3301 gcatctgctc gcccgggtgt atgtcgtcgc cgggcagccg gacaaggcca tcgcggtcat
     3361 cggccggctg ctcaagctgc cctacgacct gacgccagg
//
LOCUS       DATIFF010000989         2258 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1046887, whole genome shotgun sequence.
ACCESSION   DATIFF010000989 DATIFF010000000
VERSION     DATIFF010000989.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2258
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1046887"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            267..1280
                     /gene="trpD"
                     /locus_tag="VLD58_14400"
     CDS             267..1280
                     /gene="trpD"
                     /locus_tag="VLD58_14400"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HSB55547.1"
                     /translation="MDPLKHALRRIADAGTLSSDETAAAFGVIMRGEATPALIGALLL
                     ALRARGETAEEVAGAAQALRAAMVSVRLGDGAPLVDTCGTGGGAVGTFNVSTAAAFIT
                     AAAGARVAKHGNRSHTSKCGSADVLEALGIDILLPPEQAAAQLDDVGMVFFFAPNYHP
                     AMRHVGPTRKELGVPTIMNLVGPLANPAGVLRQVVGVADAPRARLMAEALLQLGAEHA
                     LVVHGEIGMDEISPTGRTEVWEVRDRMTRCWLLDPSDYGLEWDATDELAGAEPAGNAR
                     RIERLLAGEKDEAARRAVLLNAAAGIYVAGLADSYAESVKVATQALASGRAAQVLSRM
                     RVR"
     gene            1277..>2258
                     /locus_tag="VLD58_14405"
     CDS             1277..>2258
                     /locus_tag="VLD58_14405"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HSB55548.1"
                     /translation="MSLKVRSALFVFGLLLAGLVIHQVGVQVLLQHLATAGWLLAPCV
                     GVWGLVFFFNSSGWWTLLGVEKRRPGLGRAWFISVTAIALNYVTPAAGFGGEAYRAAS
                     VAPWIGGQRAIGSVVQYRLLFALSHMLFVLTALIPAIWLLPGTPIAYLLFAITLVIGG
                     VVSWFLIRRHQEGMLEAGLDLVLAIPLIRRLARGLEARRPALRALDEQITTIYHEHPA
                     VFWRAIVIEYAARYVTACELVVIFWGMGLGFRPVTAMVVSALSTTIGNIFFFVPFELG
                     AREGGLFLVFKLLGLSPEIGVFTAIVTRLRELTWILLGLAFLWVSGGKLEA"
BASE COUNT          304 a          765 c          801 g          388 t
ORIGIN      
        1 gcacgccttc ggcgactgga acgccgaccc gccggatgat ccggagagct ggggagtcac
       61 cctgcgaaag gtgcgataga gcggggaacc ggactgtcat cccgaggagc gtagcgacga
      121 gggatctact gtccctggca acgagcctgg cgaagtagat ccctcgctcg ggatgacaac
      181 ctatcctcgg cccgccttgc cgccttgccg ccttgccgcc tctcccgctt tgccccctcg
      241 ccctcccaac ggagcttccc cccatcatgg atccactcaa acacgccctc cgccgcattg
      301 ccgacgcggg gacgctgagc agcgacgaga cggccgccgc gttcggagtc atcatgcggg
      361 gtgaggcgac ccccgcgctg atcggggcgc tgctcctggc actcagggcc cggggggaga
      421 ccgccgagga ggtcgccggt gcggcgcagg cccttcgtgc cgcgatggtc tctgtgcggc
      481 tgggcgacgg ggccccgctg gtcgatacct gcggcaccgg aggcggggcg gtgggaacct
      541 tcaacgtctc cactgccgcc gccttcatca ctgcggccgc cggggcgcgc gtggccaagc
      601 acggcaaccg gagtcacacc tccaagtgcg gcagcgccga tgtgctcgag gcgctcggca
      661 tcgacatcct gctccccccg gaacaggccg cggcgcagct cgatgacgtg gggatggtct
      721 tcttcttcgc cccgaactac caccccgcca tgcgccacgt cggccccacc cggaaggaac
      781 tcggcgtgcc caccatcatg aacctggtgg gcccgctggc gaatcccgcc ggcgtgctgc
      841 ggcaggtcgt gggcgtggct gacgcgccga gagcccgtct catggccgag gcgctgctgc
      901 agctcggggc ggagcacgcg ctggtggtgc acggggaaat cggaatggac gagatcagcc
      961 cgaccggcag gaccgaggtc tgggaagtcc gcgacaggat gactcgctgc tggctgctcg
     1021 accccagtga ctacggtctt gagtgggacg caaccgacga gctggccggc gcggagccgg
     1081 ccgggaacgc ccggcggatc gaacgcctgc tcgccggcga gaaggatgag gctgcgcggc
     1141 gcgcggtcct gctcaacgcc gccgcgggga tctatgtcgc cgggctggcg gacagctacg
     1201 ccgaatccgt gaaggtggcg actcaggcgc tcgcctcggg ccgggcggcc caggtgctga
     1261 gcaggatgcg ggtccgttga gcctcaaggt ccgatcagcc ctgttcgtct tcgggctgct
     1321 gctggcggga ttggtcatcc atcaggtcgg ggtccaggtg ctgctccagc acctggccac
     1381 tgccgggtgg ctgctcgccc cgtgcgtcgg tgtctggggc ctggtgttct tcttcaattc
     1441 cagcggctgg tggacccttc tcggcgtcga gaaacggcgc ccgggactgg ggcgcgcctg
     1501 gttcatctcg gtcacggcca tcgcgctcaa ctacgtcacg ccggcggccg gcttcggcgg
     1561 cgaagcgtac cgggcagcat ctgtggctcc gtggatcggg ggccagcggg ccatcggctc
     1621 ggtggtgcag taccgcctgc tctttgcgct ctcgcacatg ctgttcgtgc tcaccgcgct
     1681 gatccccgcc atctggcttc tccccggcac cccgatcgcg tacctgctct ttgccatcac
     1741 cctcgtgatc ggcggggtgg tgtcgtggtt cctcatccgg cgtcaccagg aggggatgct
     1801 ggaggccggg ctcgacctgg tgcttgcgat tcccctcatc cggcggctgg cgcgcgggct
     1861 cgaggcacgc cgccccgcgt tgcgggcgct cgacgagcag atcacgacca tctaccacga
     1921 gcatcccgcc gtcttctggc gggccatcgt gatcgagtat gcggcccgct acgtcaccgc
     1981 ctgcgagctg gtcgtgatct tctggggaat ggggctgggt ttccggccgg tcaccgcgat
     2041 ggtggtcagt gcgctcagca ccacgatcgg gaacatcttc ttcttcgtgc cgttcgagct
     2101 gggcgcgcgg gaaggcgggc tcttcctggt gttcaaactg ctggggcttt cgccggagat
     2161 cggggtcttc acggcgatcg tgacgcggct gcgggagctg acgtggatcc tgctggggct
     2221 ggccttcctg tgggtgagcg gcgggaagct ggaggcga
//
LOCUS       DATIFF010000990         1769 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1200848, whole genome shotgun sequence.
ACCESSION   DATIFF010000990 DATIFF010000000
VERSION     DATIFF010000990.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1769
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1200848"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..836)
                     /locus_tag="VLD58_14410"
     CDS             complement(<1..836)
                     /locus_tag="VLD58_14410"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004329 - formate-tetrahydrofolate ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HSB55549.1"
                     /translation="MSKVPTDIEIAQAAKLRPIAEVAAEVGLGPDEILPYGRYKAKIA
                     PEAIARRSPKGRLVLVTGINPTPAGEGKSTCTVGLAQAMRRLGKKVILCIREPSLGPV
                     FGVKGGAAGGGYAQVVPMDEINLHFTGDFHAVATAHNLLSAMLDNHIHHGNALGIDSR
                     RITWPRTMDMNDRALRSIVVGLGGMNGGPTREERFVIVPASEIMAILCLADDLPDLEQ
                     RLGRIIIGLTKDKKPVRAGDLRATGAMTLLLKDAILPNLVQTLEGGPALVHGGPFGNI
                     AHG"
     gene            complement(1057..>1769)
                     /locus_tag="VLD58_14415"
     CDS             complement(1057..>1769)
                     /locus_tag="VLD58_14415"
                     /inference="COORDINATES: protein motif:HMM:TIGR00010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HSB55550.1"
                     /translation="LARAWAAGVAHVVVIGESAAALETGLALAERDPRVSVTAGVHPH
                     DAAGWGPDTGAWLAERLADPRVVGTGEMGLDYHYDHSPREVQRDVFDRQLALACAAGK
                     PAVIHARSADPDVEAILRNHPSVTAILHSFSSGAGLLRAALAAGHYVSFSGMVTFRNW
                     RDDDLVRMVPDDRLLLETDAPYLAPVPHRGKRNEPAFVRETAFRVAQIRGVAAEALIA
                     ETGANARRVFGGRLATGH"
BASE COUNT          259 a          621 c          617 g          272 t
ORIGIN      
        1 ccgtgcgcga tgttgccgaa ggggccgccg tgcaccaggg cggggccgcc ctcgagggtc
       61 tggaccaggt tgggcaggat ggcgtccttg agcagcaggg tcatcgcccc ggtcgccctc
      121 aggtcgccgg cacggaccgg cttcttgtcc ttggtgagcc cgatgatgat ccggccgagc
      181 cgctgctcca ggtccggcag atcgtcggcc aggcagagaa tcgccatgat ttcactggcg
      241 gggacgatca cgaaccgctc ttcccgggtc ggcccgccgt tcatcccgcc gagcccgacg
      301 acgatggacc gcagggcccg gtcgttcatg tccatcgtcc gaggccaggt gatccggcgc
      361 gagtcgatcc ccagggcgtt gccatgatgg atgtggttgt ccagcatggc cgagagcagg
      421 ttgtgcgcgg tggcaacggc atggaaatcg ccggtgaagt gcaggttgat ctcgtccatc
      481 ggcaccacct gggcgtagcc gccgccggcg gcgcccccct tcaccccgaa gaccgggccc
      541 agcgagggct cccggatgca caggatcacc ttcttgccca gccgtcgcat cgcctgggcc
      601 agcccgacgg tgcaggtgga cttcccctcc ccggccgggg tggggttgat ccccgtgacg
      661 agcaccagcc gccctttcgg gctccggcgc gcgatcgcct ccggcgcgat cttggccttg
      721 taccggccgt agggcagaat ctcgtccggg ccaaggccga cttccgcggc gacctcggcg
      781 atgggccgca gcttcgccgc ctgggcgatt tcgatgtccg tcggaacctt gctcatgacc
      841 gggtcttctc ctgggagaag ggtgtgtggg agggattacg gacgcccggc tccgggccgg
      901 aggcgtccgg gggacgtgat tgagaattgc tgattgatga ttgccgattg acgattggct
      961 gatcgacgcg ccaccatcca ccggtgcgga caccggaggg agatcctgcg cgggccgcca
     1021 cctgccaccc catcagcaat cgtcaatcgg caatggtcaa tggccggtcg caagccggcc
     1081 tccgaacacc cgtcgcgcgt tggcgccggt ctcggcgatc agcgcctcgg ccgccacccc
     1141 gcgaatctgc gccacacgga acgccgtctc ccgcacgaag gcgggctcgt tgcgcttgcc
     1201 ccggtgcggg accggggcca ggtaaggcgc gtcggtctcg agcagcagcc ggtcgtccgg
     1261 aaccatccgg accaggtcgt cgtcccgcca gttgcggaag gtcaccatgc cgctgaacga
     1321 gacatagtgc cccgccgcga gcgcggcgcg caagagcccg gctccgctcg agaacgagtg
     1381 caggatcgct gtgaccgagg ggtggttccg caggatggct tcgacgtccg gatcggcgct
     1441 gcgcgcgtgg atcacggcgg gcttgcccgc ggcacaggcg agagcgagct ggcggtcgaa
     1501 gacgtcgcgc tgcacctctc ggggcgaatg gtcgtaatga tagtcgagcc ccatttcacc
     1561 cgttcccacc acgcgcggat cggcgagccg ctccgccagc caggcgccgg tgtccggccc
     1621 ccagccggcg gcgtcatggg ggtgcacccc cgcggtgacc gacacccgcg ggtcgcgctc
     1681 cgccagcgcc agaccggtct ccagggcggc agccgattcg ccgatcacga ccacgtgcgc
     1741 caccccggct gcccaggccc gggccagca
//
LOCUS       DATIFF010000991         1108 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_738336, whole genome shotgun sequence.
ACCESSION   DATIFF010000991 DATIFF010000000
VERSION     DATIFF010000991.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_738336"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1108
                     /locus_tag="VLD58_14420"
     CDS             <1..>1108
                     /locus_tag="VLD58_14420"
                     /inference="COORDINATES: protein motif:HMM:NF012926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HSB55551.1"
                     /translation="AVATLTLREGETEWLVLRYDDDDIHPVNEYDSSEKLEVTAAFWR
                     VWTSRVRYVGPFRRQVERSALALKLLTHAESGAIIAAPTTSLPETLGGSRNWDYRFVW
                     LRDAAFTLAALERVGHAAEADQFMRFLKRVTRHEGGGHLQIMYALDGRRDLVERQLDH
                     LAGYCGSRPVRVGNGAADQLQIDVYGEVLETAEIWRRNHPMTDGTWRVLRPLVDWVSR
                     NWHRPDSSIWEVRGEVRHYTYSKLMSWVALDRGIRMAEELRLDGDLERWRQEREKLRA
                     EILEKGWSAEKQSFIQAYDCPLTLDASTLAIGFVDFLPWDDPRMRSTVRAIATELTSA
                     EGDLVYRYRSPDGLEGEEGAFSICTFWLAEALFRI"
BASE COUNT          175 a          370 c          387 g          176 t
ORIGIN      
        1 ggcggtcgcc accctgaccc tgcgggaggg ggagaccgag tggctggtgc tgcgctacga
       61 cgatgacgac atccaccccg tcaacgagta cgacagcagc gagaaactgg aagtcaccgc
      121 ggcgttctgg cgggtctgga cctcgcgggt gcgctatgtg ggcccgttcc gccgccaggt
      181 ggagcgttcg gctctcgccc tcaagctgct gacccatgcc gaaagcggcg ccatcatcgc
      241 ggcccccacc accagccttc ccgagaccct gggcggctcc cgcaactggg actatcgctt
      301 cgtctggctg cgcgatgccg ccttcacgct ggcggccctc gaacgggtgg ggcacgccgc
      361 cgaagccgac cagttcatgc ggttcctcaa gcgggtgacc cggcacgagg gcggcggcca
      421 cctccagatc atgtacgccc tcgatggccg gcgcgatctg gtggagcgcc agctcgatca
      481 tctggccggc tattgcggct cccggccggt gcgggtcggg aacggtgcgg ccgaccagct
      541 ccagatcgac gtctacggcg aggtgctgga gaccgccgag atatggcgcc gcaatcaccc
      601 gatgaccgac ggcacctggc gggtgctccg gccgctggtc gactgggtga gccgcaactg
      661 gcaccggcct gattcgagca tctgggaggt ccggggcgag gtccgccact atacctacag
      721 caagttgatg agctgggtgg cgctggatcg cggcatccgg atggccgagg agctgcggct
      781 ggacggcgac ctggagcgct ggcgccagga gcgggaaaag ctccgggccg agatcctgga
      841 gaaggggtgg agtgcggaga agcagtcatt tatccaggcc tacgactgcc ccctaaccct
      901 cgacgcctcc accctggcca tcgggttcgt ggacttcctt ccctgggacg atccacgcat
      961 gcggtccacc gtacgggcga tcgcgaccga gctcaccagc gccgaggggg acctggtata
     1021 tcgctatcgc tcgcccgatg gcctcgaggg ggaggagggg gccttctcga tctgcacctt
     1081 ctggctggcg gaggccctgt tccgcatc
//
LOCUS       DATIFF010000992         2586 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1969408, whole genome shotgun sequence.
ACCESSION   DATIFF010000992 DATIFF010000000
VERSION     DATIFF010000992.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2586
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1969408"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..265)
                     /locus_tag="VLD58_14425"
     CDS             complement(<1..265)
                     /locus_tag="VLD58_14425"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB55552.1"
                     /translation="MSFSQTELQELFGARYQLKRELGGGSMAAVYLAEDVRHRRQVAI
                     KVLRPEYAATFAAERFLREIEIAARLQHPHIVPLLDSGEIGGTL"
     gene            complement(281..>2586)
                     /locus_tag="VLD58_14430"
     CDS             complement(281..>2586)
                     /locus_tag="VLD58_14430"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB55553.1"
                     /translation="RQRLQREKQLPVGDVIRILSDVADALAYAHDKGVVHRDIKPDNI
                     LLAGRHALVTDFGVAKAVSIASAGPQAVTSGVALGTPAYMAPEQALAEPDLDQRVDIY
                     ALSVVGYELLTGAPPFDGPTPQAILTAHVLDAVPLLAERRSDVPAGLTTVIERGLAKQ
                     RTDRWPTAHELVHALEPLATPSGGSTPAGVPPVARRPSLLWLAVGVVVLAALAIGGYL
                     ARPPAPVTGFSESQLTFSGSVRSSAISPDGQFLAFVADSAGAAWLMVQETRGGRAIPL
                     ARAGRMGHVSWSGDGSEVRAFAYDAGASYLQTVPRLGGPSKLLKVSPWSVPSPDGTRI
                     FDLPQGGMRVKIRNMVQGDSITAPLEAGWWFSPPVWSPDGRWVAAAAFQQTGAGARLV
                     VMSATDLSTVVALEDSVALGTPAWDGRSRALYYLRGSTGLVDLYRLPLDRNGKGQAAP
                     ELVRAGLSVGSPDVHISFTSPVSISSDGTRLVYTQRHEWSNLGMVAFDDWKKGGTPTP
                     LTTGSARFKYSRISPDGRKVAVIREQTDGATLQLLPLGPGQPEDVGRFHEGLGLAWAP
                     NGQRILICIVEPDSGIGIRIYNLGDLTAQTRFYGGTGATPEWLDDSTLVAPRPGNRSL
                     QLLPLDGRPPRLMPGVDTTGWMLWPRRSPDGRYVVYAWNAGRNRQDVQLLSLRDSTSR
                     ELASGIMDPIGWSSDSRQVYLSSSQYLDDADKIVVISIAGGAARPVAEFPPDLEVLEV
                     TPDGRRAVLNMQQHQSDAWMMRLNPRK"
BASE COUNT          418 a          877 c          907 g          384 t
ORIGIN      
        1 aaagggtgcc cccaatttcc ccagaatcga gcagcggcac gatgtgggga tgctggagcc
       61 gggcggcgat ctcgatctcg cgcagaaacc gctcggccgc aaaggtcgcg gcgtattcgg
      121 gccggaggac cttgatggcc acctgccgcc ggtgccgcac gtcttccgcg aggtacactg
      181 ccgccatgct gccgcccccc aactcacgct tgagctggta gcgggccccg aagagttcct
      241 gtagttcggt ctgggaaaag ctcatgcctg gttcaaccgc ctatttccgt ggattcaacc
      301 tcatcatcca ggcatcggac tggtgctgtt gcatgttgag caccgctcgg cgtccatccg
      361 gcgttacttc cagcacctcg agatccggtg gaaactcggc gaccggacgg gccgccccgc
      421 ccgcgatcga gattaccacg atcttgtcgg catcgtccag atactgcgag ctcgagaggt
      481 agacctgccg gctgtcgctg gaccagccga tcgggtccat gatgccggag gccagctcgc
      541 ggctggtcga gtcccggagc gagagcagct gcacgtcctg ccggttccgg cccgcattcc
      601 aggcatagac cacatagcga ccatcgggtg agcggcgggg ccaaagcatc cagccggtgg
      661 tatcgacgcc gggcatgagc cgtggcggcc ggccgtcgag cggcaacagc tgaagcgagc
      721 ggttccccgg ccggggcgcc accagggtcg agtcatccag ccattcgggc gtcgcgccgg
      781 tgccgccata gaagcgggtc tgggccgtga ggtcgccgag attgtagatc cggatgccga
      841 tcccgctgtc gggctcgacg atacagatga ggatccgctg gccattgggc gcccaggcga
      901 gacccagtcc ttcgtggaac cggccgacat cctccggctg gcccggcccg agcgggagca
      961 actggagggt cgcgccatcg gtctgttccc ggatcaccgc caccttgcgg ccgtcgggag
     1021 agatcctgga atacttgaac cgggccgagc cggtggtgag cggggtaggt gtgccgccct
     1081 tcttccagtc gtcgaacgct accatgccga ggttcgacca ctcgtgtcgc tgggtgtaga
     1141 ccagccgggt gccgtcggac gagatggaga cgggactggt gaaggagatg tggacgtcgg
     1201 gtgagccgac cgagagcccg gcccggacca gctcgggcgc cgcttgtccc ttcccgttcc
     1261 ggtcgagggg aagccgatag agatccacca gtccggtcga tccccgcagg taatagagcg
     1321 cgcggctccg gccatcccag gcaggcgtgc ccagcgccac cgagtcctcg agcgccacca
     1381 ccgtgctgag gtcggtggcc gacatcacga ccagcctcgc acccgccccc gtctgttgga
     1441 acgcggcggc ggccacccag cgcccatctg gcgaccagac cggaggactg aaccaccagc
     1501 ccgcttcgag cggcgccgtg atcgagtcgc cctggaccat gttgcggatc tttacacgca
     1561 tcccgccctg gggcagatcg aagatgcggg tgccgtccgg cgagggcacc gaccagggtg
     1621 aaaccttgag cagcttcgac gggccgccga gccgcggcac ggtctggagg tagctggcgc
     1681 cggcatcata ggcaaaggcg cggacctcgg agccgtcccc cgaccaggag acatgcccca
     1741 tccggccggc ccgggcgagc ggaatggcgc ggcccccccg ggtttcctgc accatgagcc
     1801 acgcggcgcc ggcgctgtcg gccacgaaag cgaggaactg tccatcggga gaaatcgccg
     1861 agctccgaac cgatcccgag aaggtgagct gactctcgct gaacccggtg accggcgcgg
     1921 gcggccgggc gaggtacccg ccaatcgcga gcgcggcgag caccacgacg ccaaccgcga
     1981 gccagagcag tgaggggcgc cgcgccaccg gcggcactcc cgccggcgtg ctcccaccgc
     2041 tcggcgtcgc cagcggctcc agggcatgaa ccagctcgtg cgcggtgggc cagcgatcgg
     2101 tgcgctgctt ggcgaggccc cgttcgatga cggtggtgag gcccgcgggc acgtcgctgc
     2161 gccgctcggc caggagcggc accgcatcca ggacgtgggc cgtgagaatc gcctgcgggg
     2221 tcgggccgtc gaacggcggc gcaccggtga ggagttcgta gcccaccacg ctcaaggcgt
     2281 agatgtcgac ccgctgatcg aggtccggtt cagcaagggc ctgttcgggg gccatgtacg
     2341 ccggggtacc cagggccacg ccgctggtga ccgcctgcgg tccggcgctg gcgatgctta
     2401 ccgccttggc gacgccgaaa tcggtgacga gcgcgtgccg gccggcgagc aggatgttgt
     2461 ccggcttgat gtcgcggtgc actacgccct tgtcgtgggc gtaggccagc gcgtcggcca
     2521 cgtcggagag aatccggatg acgtctccca ccggcagctg cttctcccgc tggagccgct
     2581 ggcgga
//
LOCUS       DATIFF010000993         6199 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_429915, whole genome shotgun sequence.
ACCESSION   DATIFF010000993 DATIFF010000000
VERSION     DATIFF010000993.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6199
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429915"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..459
                     /locus_tag="VLD58_14435"
     CDS             <1..459
                     /locus_tag="VLD58_14435"
                     /inference="COORDINATES: protein motif:HMM:NF014195.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009427 - bacterial-type flagellum basal
                     body, distal rod, L ring [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HSB55554.1"
                     /translation="GDIVTIVVDEAVNSRESQVENASKQRGQQMGLNLTVGEAVKIGP
                     QKGFESGLSNDSKATGVANRTGGLTATISVRVISIEPSGIAKLKGEKTVGVDGRNQVI
                     QVEGVVRPEDVNSDNTVYSSRIAESVISYKGKKIGPGKGILGGILSIFWP"
     gene            555..1646
                     /locus_tag="VLD58_14440"
     CDS             555..1646
                     /locus_tag="VLD58_14440"
                     /inference="COORDINATES: protein motif:HMM:NF014206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HSB55555.1"
                     /translation="MARRLLLAALPLCRLAAFALFLAPVAATAQATEKVGDLVTTNGN
                     IPRRLIGYSLVVGLDGTGDRSIGGANGGTQTVRSIANALRRFGLEVPPDRLRPRNVAA
                     VIVTAEVSPWLRSGGRFEVQVSSIGDAVSLRGGVLWTTPLMADVDQAPIATAQGPILV
                     PEEDVRYAARRGNSARIPEGGLLEVDPTQLVALTPRLLLKHPSLATAQRVAQAINAGL
                     GDSTVAKVDDPGSITLNPGARGADNLIGFLASVDTLPVRMVPDARVVIDARSGTVVSG
                     GTIHVAAATVSHRGMTLRIGGPPPAAPAPGDTTARQEPEGLLAVGEGATVQEVAAGLH
                     AAGARPQEIAAMFSALREVGAIGAEVVVR"
     gene            1643..1936
                     /locus_tag="VLD58_14445"
     CDS             1643..1936
                     /locus_tag="VLD58_14445"
                     /inference="COORDINATES: protein motif:HMM:NF021638.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod-binding protein"
                     /protein_id="HSB55556.1"
                     /translation="MIDPVKGNRPGPAGTDAAHARLRKAAHQLEGLFVNELLKAMRET
                     VPEDGIIGQAPGQEMFTGMMDERIADLYAGRSEHGLGEALYRQLSRRLPHEGS"
     gene            1954..2484
                     /locus_tag="VLD58_14450"
     CDS             1954..2484
                     /locus_tag="VLD58_14450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55557.1"
                     /translation="MPYGHQEFIATSPASSLRMGDLAQALLYEANVIEELRQALLRQR
                     AGVAADDAEQVETSIHAMGRTLLTLEEARRRRGALTSLISGSDPTPLEKLEGMFGGVL
                     PPELENARARVKRAALATAQDVAINQHILRRALEAGDAFLQRLFSMASDPAPSYQRNE
                     SPAEAPRAGLLLNRTA"
     gene            2484..3854
                     /gene="flgK"
                     /locus_tag="VLD58_14455"
     CDS             2484..3854
                     /gene="flgK"
                     /locus_tag="VLD58_14455"
                     /inference="COORDINATES: protein motif:HMM:TIGR02492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009424 - bacterial-type flagellum hook
                     [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HSB55558.1"
                     /translation="MSLTSLLSIARTALLTHQRAVDTTGHNIANASTPGYTRQRLALT
                     AEVPLNTAIGQVGRGVTAEGIERLRDGFLDQHYRRENGDLGRFSTMKETLGQVEDVFG
                     EPTSTGLAAGIDDLLSAFGDLANDPSGRTPRTLVRQAAQNLVQQFRQTDQRLGSIAND
                     VRAKMVDATGQINQLTQQIADLNVEIRSANGGLRESPDLKDKRDVLVDQLSNLAGVRV
                     IDRTDGTVGIAAGDALLVDGGQVTRLEVRDAGQGRVEVGIQGSGLPINFKSGSLAGLV
                     ELSSTTIPGVRDKLNGLVKSIVTEVNTIHRGGRTLTGGTGVDFFDPTGLTLDSVKVSS
                     AVTLSTDNIAAGQTGAAGDNSNALAIAALRTTGVNSLNGATLGSGYQQIVSELAVALQ
                     DMTSRSEAQTTITSNADAQRQSVSGVSVDEELTSLITQQNAYAAAARLVTVADDMIKD
                     VIGMVR"
     gene            3886..4122
                     /locus_tag="VLD58_14460"
     CDS             3886..4122
                     /locus_tag="VLD58_14460"
                     /inference="COORDINATES: protein motif:HMM:NF014638.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006109 - regulation of carbohydrate
                     metabolic process [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator"
                     /protein_id="HSB55559.1"
                     /translation="MLILNRRQGEAIILDGGIRIVVLSSDRRGARLGIEAPPSVNIQR
                     EELVSRIAEENRRANARQSGTEWLESLPLRGPAK"
     gene            4331..5305
                     /locus_tag="VLD58_14465"
     CDS             4331..5305
                     /locus_tag="VLD58_14465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55560.1"
                     /translation="MSRLHVIQPSRHATRLWATARWSAIVGVLALLVAMLRWPQQALL
                     VLWYIVIPLLPATFFVTTAIWRGICPLATLNEWGNRLGRPRELPPEVIARLRVAGLAL
                     FFVLVPARHIFFNQDGPVLAAVIVAVGALAVLFGARFPVRSAWCNALCPVLPVELLYG
                     QAPLTRVERGRCTSCDVCTPRGCMDLAGEKTILQVLGPSRRTGAWLATPHGLFFAALP
                     GFVVGYNQVRDGALASAPAVYGTVLEWSLASVVVTVVLVLAFRISSRLALPFLAAIAG
                     GVYYWFAGPAVAEHLKLGQGVALTIQATGLGLILWWMKTLFSRRSVAA"
     gene            complement(5338..6075)
                     /locus_tag="VLD58_14470"
     CDS             complement(5338..6075)
                     /locus_tag="VLD58_14470"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSB55561.1"
                     /translation="MSAPAVPAATTLLQHEELLIRADRTAVMATLARGMAHDLRGPLQ
                     TLTLMVDPHADVFGNPEGSRLMGAVSTAVQHLTETITRFSQVYAPIETEPAPLIADEI
                     INYVWDLQRYQRGLTPAEVSLRVAPGLPPLRGIEYHLRHLLLSLILNAKQALQGRTDG
                     QIVLAAELASPNIRLSVEDNGPGMNEESLQRAFEAFYTTREGSLGIGLTVARWLAERM
                     GGQLTLEPGPYGGMNAVVLLPEWRRGG"
BASE COUNT          987 a         2101 c         2160 g          951 t
ORIGIN      
        1 ggtgacatcg tcaccatcgt ggtcgacgaa gcggtgaatt cccgcgagag ccaggtcgag
       61 aacgccagca agcagcgggg ccagcaaatg ggcctcaacc tgaccgtggg cgaggcggtg
      121 aagatcgggc cgcagaaggg cttcgagagc ggcctcagca acgactcgaa ggccaccggc
      181 gtggccaacc gcaccggcgg gctcaccgcg accatcagtg tccgggtgat ctcgatcgag
      241 ccgagcggga tcgcgaagct caagggtgag aagacggtcg gggtcgacgg gcgcaaccag
      301 gtcatccagg tggaaggcgt ggtgcggccc gaagacgtga actccgacaa tacggtgtac
      361 tcgagccgca ttgccgaatc ggtgatcagc tacaagggga agaagatcgg tcccggcaag
      421 gggatactgg gtgggattct ttcaatcttc tggccatagg tttgggtgaa gcgatgagtg
      481 tatttgtgag ggcggccggg cggcatggcg gcaaggcggc cgacagggcg gacagtgtga
      541 ggtgggcggc agcgatggcg aggaggctcc tcctggccgc tttgccgctt tgccgccttg
      601 ccgccttcgc actgttcctc gccccagtgg cggccactgc ccaagccacc gagaaagtcg
      661 gcgacctcgt caccaccaac ggcaacatcc cccgccggct catcggctac agcctcgtgg
      721 tcggcctcga cggcaccggc gaccgctcca tcggcggcgc caatggcggc acccagacgg
      781 tgcgctcgat cgccaacgcg cttcgccgtt tcgggctgga ggtcccgccc gatcgtttgc
      841 gcccgcgcaa cgtggccgcg gtaatcgtca ccgccgaagt ctcgccctgg ctccggtcgg
      901 ggggacggtt cgaggtacag gtgagttcga tcggcgatgc cgtgagtctc cggggcggag
      961 tgctctggac cacccccctg atggctgatg tggaccaggc cccgatcgcc acggcccagg
     1021 ggccgattct ggtgcccgaa gaggatgttc gctacgccgc ccggcggggg aacagcgccc
     1081 ggattccgga aggcggcttg ctcgaggtcg acccgaccca gctcgtcgcc ctgaccccca
     1141 gactgctgct caaacacccc agtctggcta ccgcgcagcg ggtggcgcag gccatcaatg
     1201 ccggcctggg ggacagtact gtcgcgaaag ttgacgatcc gggatcgatc accctcaacc
     1261 cgggtgcccg cggggccgat aacctgattg ggtttctcgc gtcggtggac acccttccgg
     1321 tccgcatggt ccccgacgcc cgggtggtca tcgacgcccg gagtggcacc gtggtgagtg
     1381 ggggaacgat ccacgtggcc gccgcgacgg tgagtcatcg ggggatgacg cttcggatcg
     1441 gcggcccgcc accagccgca cctgcgccgg gtgacaccac ggccaggcag gagccggaag
     1501 ggcttctggc tgtgggcgaa ggcgccacgg tgcaggaagt ggccgcaggg ctccacgccg
     1561 caggcgccag gccgcaggaa atcgcggcga tgttctcggc gctgcgtgaa gtcggcgcca
     1621 tcggggccga ggtggtggtc cggtgatcga cccggtcaag ggcaaccggc cgggtccggc
     1681 cgggacggac gcggcgcacg ccaggctccg gaaggcggcg catcagctgg aagggctctt
     1741 cgtcaacgag ctgctcaagg cgatgcggga gacggtgccg gaggacggca tcatcgggca
     1801 ggcgccgggg caggagatgt tcacgggaat gatggatgag cggatcgccg acctctacgc
     1861 cgggcgctcc gagcatggat tgggtgaggc gttgtaccgc cagttgagcc gccggttgcc
     1921 tcacgagggc agctgacccc gggagccgaa atcatgccct acgggcacca ggagttcatc
     1981 gccacctcac ccgcgtccag ccttcgcatg ggcgacctgg cccaggcgct cctctacgaa
     2041 gccaacgtca tcgaagagct gcggcaggcg ctgctccggc agcgggccgg agtcgccgcc
     2101 gacgatgcgg agcaggtgga gaccagcatc cacgcgatgg ggcgaacgct cctcacgctg
     2161 gaggaggccc ggcgccgccg gggcgcgctc acctcgctca tctccggcag cgacccgacc
     2221 ccgctcgaga agctcgaggg gatgttcggt ggggtgctgc cgcccgagct cgagaatgcc
     2281 cgggccaggg tgaagcgcgc cgcgctcgcc accgcccagg acgtcgcgat caatcagcac
     2341 atactccggc gcgcgctcga agcgggcgac gccttcctgc agcggctctt ctcgatggcc
     2401 agcgacccgg ccccgagcta ccagcggaac gagtctccgg cggaagcgcc ccgggccgga
     2461 ctccttctca accggaccgc ctgatgagtc tgaccagcct gctcagcatc gcccgcaccg
     2521 cactgctgac tcatcagcgg gcggtggaca ccaccgggca caacatcgcc aacgcgagca
     2581 cgcccgggta cacccgccag cggctggcgc tcacggccga agtccccctc aacaccgcca
     2641 tcgggcaggt gggccggggg gtgaccgccg aggggatcga gcggctgcgt gacgggttcc
     2701 tcgaccaaca ctatcgccgc gagaacggcg acctgggccg cttcagcacc atgaaggaga
     2761 ccctgggcca ggtggaggac gtcttcggcg agcccacgtc gaccgggctt gccgccggca
     2821 tcgacgatct cctctcggcc tttggcgacc tggccaatga tccctcgggc cggaccccgc
     2881 gcaccttggt gcgtcaggcc gcccagaacc tggtccagca gttccgccag accgaccagc
     2941 gactcggctc catcgcgaac gatgtgcgcg ccaagatggt cgacgcgacc ggccagatca
     3001 atcagctcac ccagcagatc gccgatctca acgtcgagat ccggagcgcg aacggcggac
     3061 tgcgtgaatc gcccgacctc aaggacaagc gggacgtcct ggtggaccag ctctccaacc
     3121 tcgccggggt ccgggtcatc gaccggaccg acggcaccgt gggcattgcc gccggcgacg
     3181 ccctgctggt ggacgggggc caggtcaccc gtctcgaggt gcgcgacgcg gggcagggac
     3241 gggtggaggt cggcatccag ggcagcggcc tgccgatcaa cttcaagagc ggcagcctcg
     3301 ccggcctggt cgagctctcg agcacgacca ttcccggagt gcgtgacaag ctcaacggcc
     3361 tggtcaagag catcgtcacc gaggtgaaca cgattcaccg gggcggacgg accctgaccg
     3421 gcggcaccgg ggtcgatttc ttcgatccca cgggcctcac gctcgacagc gtgaaggtct
     3481 cgtcggccgt gaccctcagc accgacaaca tcgcggcggg gcagaccggg gccgcgggcg
     3541 acaacagcaa cgcgctcgcc atcgcggcgc ttcgcaccac cggggtgaac agcctcaacg
     3601 gtgcgacgct gggctcgggg tatcagcaga tcgtgtcgga actggcggtg gcgctccagg
     3661 acatgacgtc gcggagcgag gcccagacca ccatcacgag caatgccgat gcccagcgcc
     3721 agtcggtgag cggggtttcg gtggacgagg agctgacctc gctcatcact cagcagaatg
     3781 cctatgccgc cgccgcccgt ctcgtgacgg tggcggacga tatgatcaag gacgtcatcg
     3841 gcatggtccg gtaggttcac tcggcgggga gaggcaggcg cggacgtgct gattctgaat
     3901 cgtcgccagg gagaggcgat catcctggac ggagggatcc ggatcgtggt gctgtcgagt
     3961 gatcgacgcg gcgcccggct cggcattgag gcccccccca gcgtgaacat ccagcgggag
     4021 gagctggtat cgcgcatcgc cgaggagaac cggcgggcaa atgcgcggca gtcgggcacg
     4081 gaatggctgg agtcgctgcc gttgcggggg cctgccaaat aggcttgggg cttggggcca
     4141 ccgtggaggc gggaggcagg aggcgggcgg tggccggagc aacggctgac aggctccacc
     4201 acaagccggg tgcctcaacc tcccgcctcc gccggcctcc ggcctccggc ccacctaagc
     4261 ccaagcccaa agccccaagc tcaacaaccc tcgaccgtcc ctccgcccca ccgtagcttc
     4321 cgttccaccc atgtcccggc tccacgtcat ccagccctcg cgccacgcga cgcgcctctg
     4381 ggccacggcc cgctggtcgg cgatcgtggg cgtactcgcg ctccttgttg cgatgctccg
     4441 ctggcctcag caggccttgc tggtcctctg gtacatcgtc attcccctcc tccctgccac
     4501 cttcttcgtc accaccgcca tctggcgggg catctgcccc ctcgcgaccc tcaacgaatg
     4561 gggtaaccgg ctgggacgcc cacgcgagct accacccgag gtgatcgccc ggctgcgggt
     4621 cgctggattg gccctgttct tcgttctggt ccccgcccgc cacatcttct tcaaccagga
     4681 cggccccgtc ctcgcggccg tcatcgttgc ggtgggcgcc ctggccgtgc tcttcggcgc
     4741 gcgcttcccg gtccgctcgg cctggtgcaa cgccctctgc ccagtgcttc cggtagagct
     4801 cctgtatggt caggcgccgc tcacgcgggt ggagcggggc cgctgcacct cgtgcgacgt
     4861 ctgcaccccg cggggctgca tggatctggc gggagagaag acgatcctcc aggtgctcgg
     4921 cccgtcacgc cgaaccggag cgtggctcgc cacgccgcac gggctcttct tcgcggccct
     4981 gcccggattc gtggtggggt acaaccaggt gcgcgacggg gcgctggcca gcgcaccggc
     5041 cgtctacggc acggtgctgg aatggtcgct cgcgagcgtg gtggtgaccg tggtgctggt
     5101 gctggcgttc aggatctcgt cgcggctggc tctgccgttc ctggctgcca tcgctggtgg
     5161 ggtctactac tggtttgccg gcccggcggt ggccgagcac ctcaagctgg ggcagggtgt
     5221 cgcgctgact attcaggcca ccgggctcgg cctgatcctg tggtggatga agacgctatt
     5281 ctcgaggcgc tcggtcgccg cctgaccgcc cgcctgaccg tctgaccgtc tgaccctcta
     5341 cccgcccctt cgccactcgg gcaacagcac caccgcattc atcccaccgt agggtcccgg
     5401 ctccagcgtc agctggccgc ccatccgttc cgccagccag cgtgccaccg tcagcccgat
     5461 gccgaggctg ccttcgcggg tggtgtagaa cgcctcgaag gcgcgctgca gcgactcctc
     5521 attcatgccg ggtccgttgt cttccacgct caaccggata ttgggactcg ccagctcggc
     5581 cgcgagtacg atctgcccgt cggtccggcc ctgcagcgcc tgcttggcgt tgaggatcag
     5641 gctgaggagg agatggcgca ggtgatactc gatgccccgg agcggcggta accccggggc
     5701 gacccggagc gagacctcgg cgggggtgag tccccgctga tagcgctgga ggtcccagac
     5761 atagttgatg atctcgtccg cgatgagcgg ggccggctcc gtctcgatcg gggcgtagac
     5821 ctggctgaag cgggtaatgg tttcggtgag atgctgtacc gcggtactca ccgcgcccat
     5881 cagccggctt ccctcggggt tgccgaagac gtcggcgtgc ggatccacca tcagcgtgag
     5941 ggtctggagc ggcccccgga ggtcgtgggc catgccgcgg gccagcgtgg ccatgacggc
     6001 ggtgcggtcg gcccggatga gcagctcttc atgctgaagc aaggtcgtcg cggcgggcac
     6061 agcgggagcg ctcacctcgg gttctcccgg agaggatgcc gtagactacc tcccggtgcc
     6121 gggtcggcgc aattggtcaa gggtcaaggg tcgagggtcg agggtcgagg gtcgagggcg
     6181 gatagtactg cgaagccct
//
LOCUS       DATIFF010000994         1383 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2277064, whole genome shotgun sequence.
ACCESSION   DATIFF010000994 DATIFF010000000
VERSION     DATIFF010000994.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1383
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2277064"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..566)
                     /locus_tag="VLD58_14475"
     CDS             complement(<1..566)
                     /locus_tag="VLD58_14475"
                     /inference="COORDINATES: protein motif:HMM:NF013502.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HSB55562.1"
                     /translation="MPKRDIVVIGASAGGPEALAEIVHRLPPAFPASIFVVVHFPAAV
                     SSVLPRILGRAGPLPAIHPEDGDPILPGHIYVARPDCHLAIQDRRVRVTGGPRENGHR
                     PAIDPLFRSAAHAAGPRVIGLVLSGNLDDGTAGLLTIKQHGGITVVQSPETAQYPGMP
                     RSAIAHVPVDHVVTLEAVADLLGRLTSEP"
     gene            920..>1383
                     /locus_tag="VLD58_14480"
     CDS             920..>1383
                     /locus_tag="VLD58_14480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55563.1"
                     /translation="MYKGEELSASLATGGDLDAVLQRSADTLVPELADLSVVALGDTA
                     AIDRLAVAHRRPAKGAQAREQLESSLPTLLRAALSEAEEGHYFRWTPDVRQVDSQVLS
                     RPDREVAGLVDRLGVQSLIVVALRVGGRSIGALGIARTESARPYRAIDLAAA"
BASE COUNT          219 a          459 c          505 g          200 t
ORIGIN      
        1 ggctcgctgg tgagccgccc cagcagatcg gcgaccgcct cgagcgtgac cacgtggtcc
       61 accggcacgt gcgcgatggc gctccggggc atgccgggat actgcgcggt ctcgggactc
      121 tgcaccacgg taatcccacc atgctgcttg atcgtcagca ggccggccgt accatcgtcg
      181 agattgcctg agagcaccag gccgatcact cgcgggccgg cggcgtgggc ggcgctgcgg
      241 aagagcgggt cgatcgcggg ccggtgtccg ttctcccggg ggcctccggt gacgcgcacg
      301 cggcggtcct ggatggccag atgacagtcg ggccgcgcga cgtaaatgtg ccccggcagg
      361 atcggatcgc cgtcttcggg atggatggcg ggcagcggcc ctgcccggcc caggatgcgc
      421 gggagcacgc tgctcacggc ggccggaaag tgcaccacga cgaagatcga ggcaggaaag
      481 gcaggaggga gccggtggac aatctcggcc agtgcctccg ggcctccggc cgacgctccg
      541 atcaccacga tatcccgttt cggcatgcgg atctcccacc cagcctcaaa gtattgttcg
      601 gcaccagcgg gggcaatcaa gcgcgcggag gtgatccggg tcaccgacgg tcgcggcgag
      661 agcgccccta ctggtggagg caccggtcgg caccccactt ggcatggcta cctcgtccac
      721 cctaaccggc gatgccgccg cggcgcggtg acggacgcat ccctccgtcg ggacgtcggc
      781 caggacacaa atggtacccg acgcgtcata tagattgagc gacgagggtg cgctgcgtgc
      841 cagtgatggg gcaccgatgc cgtagaagac gtagctgtct cgaccgccgg gtccgcacga
      901 ccggctgagc aaggagctga tgtacaaggg agaggagttg agcgcgtcgc tggcgactgg
      961 aggcgatctg gacgccgtgc tccagcgctc cgccgatacg ctcgtaccgg agctggccga
     1021 cctgtccgta gtggcgctgg gagacaccgc ggcgatcgac cggctggccg tggctcaccg
     1081 ccgccccgcg aagggagccc aggcacggga gcagttggag tcgtcgctac ccaccctctt
     1141 gcgcgcggcg ctgtccgaag cggaggaagg tcattatttc cgctggactc ccgacgtgcg
     1201 ccaggtggac tcccaggtgc tcagccgccc cgaccgtgag gtggcgggcc tggtagaccg
     1261 gttgggggtg caatccctga tcgtcgtcgc gctgcgggtg ggaggccgga gcatcggggc
     1321 cctgggcata gcccgcaccg agtcggcgcg gccgtaccgc gcgatcgacc tggcggccgc
     1381 cca
//
LOCUS       DATIFF010000995         2148 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_890730, whole genome shotgun sequence.
ACCESSION   DATIFF010000995 DATIFF010000000
VERSION     DATIFF010000995.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_890730"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..1916
                     /gene="mnmG"
                     /locus_tag="VLD58_14485"
     CDS             30..1916
                     /gene="mnmG"
                     /locus_tag="VLD58_14485"
                     /inference="COORDINATES: protein motif:HMM:TIGR00136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HSB55564.1"
                     /translation="MTVHPAAYDILVVGAGHAGCEAALAAARMGCRVLLLAIDLDKLA
                     AMPCSPSIGGMAKGQLVKEIDALGGEMARVTDRTAIQYRTLNTKKGPAVHSSRTQNDK
                     QRYHMAMKQVVESQPGLELKQALVERLVVEGGRVAGAEDHTGFGYAARAVVLATGTFL
                     SGLVHIGFSSIRAGRAGEFASYGLPAHLKELGFELGRLKTGTPPRLKRSSIDFSRFAR
                     QGGDERPQPFSLFSRGPELPQVASYIGHTSGRTHEVVRRNLSRSALYGGLITGTSARY
                     CPSFEDKIVKFPERDRHQIILEPEGLDSEEIYASGLGNSLPIEVQIEVVRSIDGMEAA
                     EIMRPAYAIEYDYLNPLQLKNTLESKRVAGLYLAGQINGTSGYEEAAAQGLWAGINAA
                     CRVQGRPPFVLDRSQAYMGVMVDDLVTRGTGEPYRMFTSRAEYRLTLREDNADLRLME
                     IGHELGLIAAEAVRDMRERRRRIAGEIERVRQTVVRPGPEVNAYLVGSGSPPIQQGVR
                     LDQLVKRAGLGYPAVERLAPAPEPVAPPVARQVEIEIKYEGYIDKQMKEIEKFKHLEK
                     IRIPDEFDYQAVHGLSNELKSKLGAVRPACLGQAARMDGMTPAALSVLMVALKARSAS
                     AAAA"
     gene            1980..>2148
                     /locus_tag="VLD58_14490"
     CDS             1980..>2148
                     /locus_tag="VLD58_14490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013983884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HSB55565.1"
                     /translation="MAEDYYKILGVNRTADEAEIKKAYRKLAMKYHPDHAKGDKAAEE
                     KFKKISEAYAVL"
BASE COUNT          401 a          709 c          732 g          306 t
ORIGIN      
        1 tcgcgcaatc gacaagccgg cctgcaccca tgaccgtcca ccccgccgct tacgacattc
       61 tcgtggtagg agccggccac gccggctgcg aagccgctct ggccgcggcc cgcatgggct
      121 gccgcgtgct gctgctggcg atcgacctcg acaagctcgc ggccatgccg tgcagccctt
      181 ccatcggcgg catggcgaag gggcagctgg tgaaggagat cgacgccctc ggcggcgaga
      241 tggccagggt caccgaccgc accgcgatcc agtaccgcac gctcaacacc aagaaggggc
      301 cggccgttca ctcctcccgc acccagaacg acaagcagcg ctaccacatg gcgatgaagc
      361 aggtggtcga atcccagccc ggcctcgagc tgaagcaggc cctggtggag aggctcgtgg
      421 tcgagggtgg tcgggtggcg ggggcggagg accacacggg gttcgggtat gccgcccggg
      481 cggtcgtgct cgccacgggg acgtttctga gcggcctcgt gcacatcggc ttcagctcga
      541 tccgggccgg ccgggccggc gagttcgcct cctacgggct gccggcgcac ctgaaggagc
      601 tggggttcga gctggggcgg ctgaaaaccg gcaccccccc gcgcctgaag cgctccagca
      661 tcgacttctc ccgcttcgcc cggcaagggg gggatgaacg cccgcagccg ttttcgcttt
      721 tcagccgggg gccggagctg ccacaggtgg cgagctacat cggccacacc tccgggcgga
      781 cccacgaggt cgtgcgccgc aacctgtccc gctcggcgct ttacggcggc ctcatcaccg
      841 gcacatcggc ccgctactgc ccctccttcg aggacaagat tgtgaagttt cccgaacggg
      901 accggcatca gatcatcctg gagccggagg gcctcgactc ggaggagatc tacgcgagcg
      961 gcctgggaaa cagcctcccg atcgaggttc agatcgaagt ggtgcgatcg atcgacggca
     1021 tggaagccgc cgagatcatg cgccccgcct atgccatcga gtacgactac ctgaaccctc
     1081 tccagctcaa aaacacgctc gagagcaagc gcgtggcggg gctgtacctg gcggggcaga
     1141 tcaacggcac ctcgggctac gaggaggcgg cggcccaggg gctgtgggcc ggcatcaacg
     1201 ccgcctgccg ggtccagggg cggccgccgt tcgtcctgga ccgctcccag gcctacatgg
     1261 gggtcatggt ggacgacctg gtgacgcgcg ggaccggcga gccctaccgc atgttcacct
     1321 cgcgcgccga ataccggctg accctgcgcg aggacaacgc cgacctgcgc ctgatggaga
     1381 tcggccacga actcggcttg atcgcggccg aggcggtccg ggacatgcgg gagcgccgtc
     1441 ggcggatcgc aggggagatc gagcgcgtcc ggcaaacggt ggtccggccg ggcccggagg
     1501 tcaacgccta cctggtcggg agcggctccc cgccgatcca gcagggggtc cgcctggacc
     1561 agctggtgaa gcgggccggc ctcggatacc ccgcggtgga gcgcctcgcc cccgccccgg
     1621 aaccggtggc gccgccggtg gcgcgtcagg tggagatcga gatcaagtac gaaggctaca
     1681 tcgacaagca gatgaaggag atcgaaaagt tcaagcacct ggagaagatc cggatccccg
     1741 acgaattcga ctaccaagcg gtccacggcc tctccaacga gctgaaaagc aagctcggcg
     1801 ccgtgcgtcc ggcctgtctc ggccaggcgg cccgcatgga cggcatgacc cccgcggcgc
     1861 tctcggtgct gatggtggcg ctgaaagccc gcagcgcatc ggccgcggcg gcttgactcc
     1921 ggggggattt caaactatct tatcgacgta aactatttga aataacgaag gattaataga
     1981 tggcggaaga ttactacaaa attctcgggg tgaaccgtac cgccgacgag gcggaaataa
     2041 agaaggccta tcgcaagctg gccatgaagt accacccgga ccacgccaaa ggggacaagg
     2101 cggccgagga gaagttcaag aagatcagcg aggcctatgc cgtcctga
//
LOCUS       DATIFF010000996         1204 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_124133, whole genome shotgun sequence.
ACCESSION   DATIFF010000996 DATIFF010000000
VERSION     DATIFF010000996.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1204
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124133"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            204..1155
                     /locus_tag="VLD58_14495"
                     /pseudo
     CDS             204..1155
                     /locus_tag="VLD58_14495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011793369.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
BASE COUNT          203 a          425 c          388 g          188 t
ORIGIN      
        1 tcggagccga tcgaccggct gatggagtgc ttcgagcagc acgggatgat gcgcccggtg
       61 ctgcggctgc gcccgatcgg gaacctgaag aactagatgt gaagtctcag gaggttgttc
      121 acaggggtag ttgatcaccc ggggtctggt tgtggaagtt gattggtgtt cgacgccatt
      181 caacccacag ccaggagccc cggatgaacc tccacagtgg agcacgcagc tgccccgcaa
      241 gtcgagccct tctgatcgag cggatccgcc acggcatgcg ggtcagcgag gccgctcagg
      301 cggccgggat cagccgccgc accgcctaca agtggatcgc ccgtcacgcc cgggaggggc
      361 aggccgggct gcgcgaccgc tcgtcccggc cccggaccag cccgaccgcg ctggcggtcg
      421 accacgtgtg ctgcatcgtg tggctgcggc agacgcggat gacgatcgcc cggatcgcgg
      481 ccggtctcga gctgccgcgc tcgacggtgg cgcgcgtgct gcagcgccgc gggctcaacc
      541 gcctgaagcg gctcgatgac cagacgccgc cacgccgcta cagccgccgg catccgggcg
      601 aactgctcca tctcgacgtc aagaagctgg gccgcatcac cggcttctac ggccaccgca
      661 tcaccggcga tcgcacccga cggcgccgcg gggcgggctg ggacttcgtc cacgtggcga
      721 tcgacgatgc ctcgcgactg gcctatgccg aagtcctggc caatgagcac ggcgacacca
      781 gcgccgcctt cctccagcgg gccgtggcct ggttccgtcg ccacgacatc cgcatccggg
      841 aggtgctgac cgacaacggc tcgggctacg tctcggcgtg cttcgccctc gcctgtaccc
      901 ggctcaagat ccagcatctg cgcacccggc cttatcgtcc ccaaaccaac ggtaaggccg
      961 aacggttcat ccagaccctg ctgcgggaat gggcctacat ccggccctat cgcacctcgg
     1021 gcctgcgggc tcgagcgctc ccgatctacc tcgcctacta caacaacgaa cgcccgcacg
     1081 gtagtctggg cgggcgtcca ccaatcagcc ggatccgatc ccggcgtgaa caacgtgctt
     1141 agacttcaca cctagagagc cttgggctcg ccgtagatga cgttgtcgat gacgacgagg
     1201 tcct
//
LOCUS       DATIFF010000997         3534 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1202349, whole genome shotgun sequence.
ACCESSION   DATIFF010000997 DATIFF010000000
VERSION     DATIFF010000997.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3534
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1202349"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(504..1271)
                     /locus_tag="VLD58_14500"
     CDS             complement(504..1271)
                     /locus_tag="VLD58_14500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55566.1"
                     /translation="MTGFSPRQPFPPQSPGRPGNPGAPGAPNSENVPDPWGVRRAENL
                     LTSLEGILSARVVTTPLGEVSEVHILAQAGLAPKQLVRNIESALLAQLGLKIDHRKIS
                     IAQTADVKPIEALERESVRDKILQRTVLFENLAVAPGKRQHRISITVTLSYHGQTESA
                     EEESSDTPRSRVEAAAKAAVTVLDRLLTESSIALEGAKIVEGFDREFAFVAVQGLGGR
                     ETILMTGTSEIKESAERAAVFAVLDATNRWTEARRVM"
     gene            complement(1324..3012)
                     /locus_tag="VLD58_14505"
     CDS             complement(1324..3012)
                     /locus_tag="VLD58_14505"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:NF014904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HSB55567.1"
                     /translation="MNFVIDAERCVACLACVRVCPTDAIAVSGDEPLLLQVVDEACIR
                     CGQCLPACPHAAVKVNGEIGRALAIAAQGDGVLILSPESVAHFYPATPEQLINACYEA
                     GFRTVTRGVIGDELVAAEYLKLWEEEPWGTLIRSTDPVVVETVRAQYPELLPYLAPVA
                     LPAVAEARYLRAQYDPGVKIAYAGICPPVSSPDLDAAITFGDLDQLFRIRGIQVQGQP
                     TLFQRVPEERRRHLSAAGGLPLALLEESRYSSRRFRKIRGLDSLRALARAVAVDRLDL
                     GFVDILSTEGVLDHPLSGPQEELYWRRELLASVEPPRSRQPIVDQTVVASVGATFAIK
                     PRRVKPDPDSVAAILEQIGLGPNGHPWDCGACGFDTCQRFAEAAALGRASMRQCTPYQ
                     ERRADEAQRAAAVDTMTGLSTYRVLRDRLVFEVERGKRSNEGFAVLFLDLDRFKEVND
                     QFGHEAGNDILRAVAEEIKNAVRASDVAARYGGDEFVVILTRTDLQGGARVAEALRAG
                     IEGVGRRLGYPAGMITVSIGLAEFDPRLPSEGDLLVSADRALYRAKAAGRNAVA"
     gene            complement(3151..>3534)
                     /locus_tag="VLD58_14510"
     CDS             complement(3151..>3534)
                     /locus_tag="VLD58_14510"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSB55568.1"
                     /translation="GSLLPVRVGAPALRDMGGQELEFILRSLLDLKLQVEELRRRLDE
                     HPQRVQVIELADHSTVADVLPEGAERDGDHPVLYRSGMTMAEVEKAAIDAALREHRGN
                     RRRAAEVLGIGERTLYRKIKAYHLE"
BASE COUNT          537 a         1340 c         1113 g          544 t
ORIGIN      
        1 caccatccgg gaaaaggcag acgtacctgc caaaccgcag cgccacacaa ggacgctgcc
       61 aggcagactg ctgcgacgaa gaaacgaatg cgaagatcgc gtgccatagg aagacagggt
      121 ggggaacccc ggtctaggag ctagttctta gctccaggtc gtcccctcgc tcttgctgaa
      181 cattccagca aggaagtagg caaccgacgt tagccagctg actttcaaca tgagcgtcac
      241 ctcccttcgg gtatactgct acctcgggaa gtggcaagcc tcgctatggc ctaccagacg
      301 ctccgctcaa tcagttgacc gctagtctcc gctctcgtgc cacgaagacc gggatcccct
      361 tacccttgtg tcctttcctg agtgggttgg cctgccgacc ccctccgccc aattcctcct
      421 gatgcgacgg gggcaccctc ggcgccccca aacccatccc tgaattgact ccaatccggt
      481 cgcccgccac gacggacgcc ggctcacatc acgcgccgcg cctccgtcca ccggttggtg
      541 gcgtccagca ccgcgaagac cgccgcgcgc tccgcgctct ccttgatctc cgacgtgccc
      601 gtcatcagga tcgtctcccg cccgcccagc ccctgcaccg ccacgaaagc gaactcgcgg
      661 tcgaacccct ccacgatctt cgccccctcg agcgcgatgc tcgactccgt gagcagccgg
      721 tccagcaccg tcaccgccgc cttggccgcc gcttccaccc ggctccgcgg cgtgtccgac
      781 gactcctcct ccgccgactc ggtctgccca tgataggaca gcgtcaccgt gatcgagatc
      841 cggtgctgcc gcttgcccgg cgccaccgcc aggttctcga acagcaccgt gcgctgcagg
      901 atcttgtccc gcaccgactc gcgctcgagc gcctcgatcg gcttgacgtc cgccgtctgc
      961 gcgatgctga tcttccggtg gtcgatcttg aggccgagct gcgccagcag cgcgctctcg
     1021 atgttgcgca ccagctgctt gggcgccagc cccgcctgcg ccaggatgtg gacctcgctc
     1081 acctcgccca gcggcgtcgt caccacccgc gccgagagga tgccctcgag gctggtgagc
     1141 aggttctccg cccggcgcac gccccagggg tccgggacgt tctcgctgtt tggggcgccg
     1201 ggagcaccgg gattgccggg gcggccgggc gactgcggag gaaacggctg tcggggactg
     1261 aatccggtca cggtgcgtgt ccttgacgtc ctgcgatgag actgcgccgc atggagaacc
     1321 cgctcacgcg acggcgttcc ggccggcggc cttggcccgg tacagcgccc ggtcggccga
     1381 caccagcagg tcgccctcgc tcggcaggcg cggatcgaac tcggcgagcc cgatgctcac
     1441 cgtgatcatc cccgccggat agcccagccg gcgccccacg ccctcgatgc ccgcccggag
     1501 cgcctccgcc acccgcgcgc cgccctgcag gtcggtgcgg gtgaggatga ccacgaactc
     1561 gtcgccgccg tagcgcgccg ccacgtccga ggcgcggacc gcgttcttga tctcctccgc
     1621 caccgcgcgc aggatgtcgt tgcccgcctc gtgcccgaac tggtcgttga cttccttgaa
     1681 ccggtcgaga tcgaggaaca ggacggcgaa cccctcgttg ctgcgcttgc cgcgctccac
     1741 ctcgaacacc agccggtcgc gcagcacccg gtaggtcgag aggcccgtca tcgtgtccac
     1801 cgctgccgcg cgctgggcct cgtcggcccg ccgctcctgg tacggggtgc actggcgcat
     1861 gctggcccgg cccagcgccg ccgcctccgc gaaccgctgg caggtgtcga acccgcacgc
     1921 cccgcagtcc cacgggtgcc cgttggggcc caggccgatc tgctccagga tggccgccac
     1981 cgaatcgggg tcgggcttca cccgccgcgg cttgatggcg aaggtggccc cgacgctcgc
     2041 gacgacggtc tggtccacga tcggctggcg gctccgcggc ggctccacgc tcgccagcag
     2101 ctcccgccgc cagtacagct cctcctgcgg ccccgacagc gggtggtcca gcaccccctc
     2161 ggtgctcagg atgtccacga agccgaggtc cagccggtcc accgccaccg cccgggccag
     2221 cgcccggagg gagtccagcc cccggatctt ccggaaccgc cggctggagt agcgcgactc
     2281 ctccagcagg gccagcggca gcccgcccgc ggcgctcagg tgccggcgcc gctcctcggg
     2341 cacccgctgg aacagggtcg gctgcccctg gacctggatg ccgcggatgc ggaacagctg
     2401 gtccaggtcg ccgaaggtga tggctgcgtc gagatccggg ctgctgaccg ggggacagat
     2461 tcccgcgtac gcgatcttga ccccggggtc gtactgcgct cgcagatatc gggcctccgc
     2521 gaccgccggg agcgccaccg gcgccaggta gggcagcagc tccgggtact gggcccgcac
     2581 ggtctcgacc accaccgggt cggtggaccg gatgagggtg ccccagggct cctcttccca
     2641 cagcttaagg tattccgccg caacgagttc gtcgccgatg acgccccggg tgacggtgcg
     2701 gaagccggcc tcgtagcagg cgttgatgag ctgctcgggc gtggccgggt agaagtgcgc
     2761 caccgactcg gggctcagga tgagcacccc gtccccctgc gcggcgatcg caagggcccg
     2821 cccgatctcg ccgtttacct tgaccgccgc gtggggacag gcgggcaggc actggccgca
     2881 ccggatgcag gcctcgtcca ccacctgcag cagcagcggc tcgtcccccg ataccgcgat
     2941 cgcatcggtg gggcacacac ggacgcatgc caagcatgcg acgcagcgct cggcgtcgat
     3001 gacgaagttc aagggacctg accggtcggg gctggattac gactctgcaa tttgacggcc
     3061 gacttcacaa ctgtcaatag atcagcgact gcaaaacaat gatacaccag aacttagccg
     3121 ccgtgacaaa ttatacgcca gcgggctaaa tcattccaga tgataggctt tgattttccg
     3181 gtacagggtc cgctccccga ttcccaacac ctccgccgcc cgccggcggt tcccccggtg
     3241 ctcccggagc gccgcgtcga tggccgcctt ctccacctcc gccatggtca tccccgagcg
     3301 gtagagcacc gggtggtccc cgtcccgctc cgccccctcg ggcaggacgt cggccacggt
     3361 cgaatggtcg gccagctcga tcacctggac ccgctggggg tgctcgtcca gccggcggcg
     3421 cagctcctcc acctggagct tgaggtcgag caggctgcgc aggatgaact ccagctcctg
     3481 cccgcccatg tcccgcaggg ccggcgcgcc cacccgcacc gggagcagcg agcc
//
LOCUS       DATIFF010000998         1001 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_430989, whole genome shotgun sequence.
ACCESSION   DATIFF010000998 DATIFF010000000
VERSION     DATIFF010000998.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_430989"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(12..275)
                     /locus_tag="VLD58_14515"
     CDS             complement(12..275)
                     /locus_tag="VLD58_14515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55569.1"
                     /translation="MRSGWATTVILVGSFAAMTSGCATSEEWAEWRSHTTHFASGSHA
                     TFSLRNNKDGSNPRVARTDIDAARQENWWGKAITVSPEQIFQN"
     gene            473..>1001
                     /locus_tag="VLD58_14520"
     CDS             473..>1001
                     /locus_tag="VLD58_14520"
                     /inference="COORDINATES: protein motif:HMM:NF013109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HSB55570.1"
                     /translation="MRALRLLDWLFDYRTAWLRYDVIAGLTAAAVVLPKAMAYATIAG
                     LPVQVGLYTALVPMVIYALVGTSRPLSVSTTTTIAILAAAVLGKVAPEGDPATLLRVS
                     ATLTLLTGLILVLAGLLRLGFIANFISEPVLIGFKAGIGLVIVLDQVPKLLGLHIGGG
                     SFVQKLLALIAHLPQT"
BASE COUNT          134 a          348 c          327 g          192 t
ORIGIN      
        1 ccgctctcga gttagttctg gaagatctgc tcggggctca ccgtgatggc cttgccccac
       61 cagttctcct ggcgagccgc atcgatgtcg gtgcgggcca cccggggatt cgagccgtcc
      121 ttgttgtttc gcagggagaa cgtcgcgtgc gagccggaag cgaagtgggt ggtgtgactc
      181 cgccactctg cccactcctc ggaggtcgca catccgctcg tcatcgccgc gaagctgccg
      241 accagtatga ccgtcgttgc ccacccgctc ctcatggcgc gtctcccttg ctctcgattt
      301 tggacctgtc ccccgcgatg cggccgatcg gtcgctcgcc gggcgtcgcc gctacggtcg
      361 ccggaggcgg gccggaggtc tataggacgt tggtcctaca tggccggact gccgaggata
      421 ggaccaacgt cccatggacc ggcaatcatg ccggcgcgta gcatcggcag acgtgcgcgc
      481 gctccgcctc ctcgactggc tgttcgatta ccggaccgcc tggctgcgat acgacgtgat
      541 cgccgggctg accgcggcgg cggtggtcct tccgaaggcg atggcctacg ccacgatcgc
      601 cgggctgccg gtgcaggtgg gactctacac cgcgctggtg ccgatggtga tctacgccct
      661 cgtcgggacg tcccggccac tcagcgtcag taccaccacc acgatcgcca tcctggccgc
      721 cgccgtgctc ggcaaggtcg ctccggaggg agatccggcg accttgctgc gggtatcggc
      781 gacgctcacc ctgctgaccg gcctgatcct cgtcctggcg gggctcctgc gcctgggctt
      841 catcgccaac ttcatctccg agccggtgct gatcggcttc aaggcgggga tcggcctggt
      901 gatcgtcctc gaccaggtac cgaagctgct cggcctccac atcggcggcg ggtcgttcgt
      961 gcagaagctg ctggcgttga tcgcgcatct gccgcagacc t
//
LOCUS       DATIFF010000999         1489 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_431351, whole genome shotgun sequence.
ACCESSION   DATIFF010000999 DATIFF010000000
VERSION     DATIFF010000999.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1489
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_431351"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1489
                     /locus_tag="VLD58_14525"
     CDS             <1..>1489
                     /locus_tag="VLD58_14525"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSB55571.1"
                     /translation="LFGVLGYLRLSVREFPDVDPPIVSVSTVLPGANPQVVESAVTDI
                     LEEELSTVEGLRTLTSSSQEGVSNITLEFNLDRDVEAAAQDTRDKVARIRERLPEDVE
                     EPVVAKQDADAQPFFWLALSGENYDLLQLSDIGDRLVKSRLQTLPGVGQARIFGERRF
                     SMRVWLDAAQLAARGLTVQDVQAAIRSRNVEVPAGRIESERREFTVRSLGELKTPEEF
                     SDLAVSNTDGVLVKLRDLGRVELGPEDERSALRYKGTPAVAIGVVRQSKSNIISVSKA
                     IQAELPRIQQSLPPGVAIHTAFDQSVFVQRSIREAEETLLIAAGLVVVIIFVFLRNLR
                     ATIIPGLAIPTSIVAAFAIMYFLGFSINNFTLLALTLAIGIVVDDAIIVLENAYRHQE
                     ELGESPDVAATNGTREIGFAVLATTIALVAVFTPLAFLKGSTGRLFNEFGIAVAGSVI
                     ISGFVALTLTPMLCAKILRVPPRHGVLYRVLESGFNQLASGYARAL"
BASE COUNT          218 a          527 c          502 g          242 t
ORIGIN      
        1 gctgttcggc gtgctcggct atctccgtct ctcggtccgc gagttccccg acgtcgatcc
       61 cccgatcgtg tcggtcagca ccgtccttcc cggcgccaat ccccaagtgg tggagtcggc
      121 cgtgaccgac atcctggagg aggagctgag cacggtggaa gggctccgca ccctcaccag
      181 ctccagccag gagggggtca gcaacatcac cctggagttc aacctcgacc gcgacgtcga
      241 ggcggcggcg caggataccc gcgacaaggt ggcccggatc cgcgagcggc tcccggaaga
      301 cgtcgaggag ccggtggtcg cgaagcagga cgccgatgcc cagccgttct tctggctcgc
      361 gctctcgggc gagaactacg acctgctcca gctctccgac atcggcgacc ggctggtgaa
      421 gagccggctc cagaccctcc ccggcgtggg ccaggcgcgg atcttcggcg agcgccggtt
      481 ctccatgcgg gtctggctcg acgccgcgca gctcgccgcc cgcgggctca cggtgcagga
      541 cgtccaggcg gccatccgga gccgcaacgt ggaggtgccc gccggccgga tcgagtccga
      601 gcggcgcgag ttcaccgtgc gctcgctcgg cgagctcaag accccggagg agttctccga
      661 cctcgcggtg agcaacaccg acggggtgct ggtcaagctg cgggacctcg gccgggtcga
      721 gctcggcccc gaggacgagc ggagcgcgct ccggtacaag gggacccccg cggtggccat
      781 cggcgtggtt cggcagtcga agtccaacat catctcggtg tcgaaggcca tccaggccga
      841 gctgccccgg atccagcagt cgctgccgcc cggggtggcg atccacaccg cgttcgacca
      901 gtcagtgttc gtccagcgct cgatccggga ggccgaggag accctgctca tcgcggccgg
      961 gctggtggtg gtgatcatct tcgtgttcct gcggaacctc cgggccacca tcatcccggg
     1021 gctcgcgatc cccacgtcca tcgtggcggc gttcgcgatc atgtatttcc tgggcttctc
     1081 gatcaacaac ttcaccctgc tcgccctgac cctcgccatc ggcatcgtgg tggacgacgc
     1141 gatcatcgtg ctggagaacg cctaccggca ccaggaggag ctgggcgaga gccccgacgt
     1201 ggcggccacc aacggcaccc gggagatcgg gttcgcggtg ctcgccacca ccatcgccct
     1261 ggtggcggtg ttcacgccgc tcgccttcct caagggatcc accgggcggc tgttcaacga
     1321 gttcggcatc gcggtggcgg ggtcggtcat catctccggg ttcgtcgcgc tcacgctgac
     1381 ccccatgctc tgcgccaaga tcctccgggt gccgccgcgt cacggagtgc tctaccgggt
     1441 gctggagagt gggttcaatc aactggcctc gggctacgcc cgggccctc
//
LOCUS       DATIFF010001000         2759 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_280055, whole genome shotgun sequence.
ACCESSION   DATIFF010001000 DATIFF010000000
VERSION     DATIFF010001000.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2759)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2759)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2759
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_280055"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(10..1236)
                     /locus_tag="VLD58_14530"
     CDS             complement(10..1236)
                     /locus_tag="VLD58_14530"
                     /inference="COORDINATES: protein motif:HMM:NF024241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSB55572.1"
                     /translation="MIKKLPPELQQLSVLIATCCIDMIGFAMVLPLLPYYALRLKATP
                     EMIGLMTAAFSVAQLLAAPFWGRFSDRYGRRPALLIGLFASAIAYVIFGLADALWLLF
                     LSRLVQGAGGGTTGVAQAYVADTIKPSGRAKALGWLSAATSAGVFIGPTVGSLSHAWF
                     GPTAPGIVAAALCLINVGFAWKWLPESKKPGSAGSKKKPVFKAATEVMEHPGRPVSRL
                     IWIYSVGMLAFASLTSVLALFLDAEHGVTEETIGYFYSYVGLLSFVMRSLLLGPIVER
                     LGEARTMRTGTVILVIGLLAYTVAPNLWVLAVIIPLVPIGTALLFPSTTALMSRAAAK
                     EDLGTTMGVAQFFAGMARVLAPILATGAFQRVGHSAPFFFAAATVALVGLMSLKIEQI
                     SMHTTETPVPVAKDGR"
     gene            complement(1233..>2759)
                     /locus_tag="VLD58_14535"
     CDS             complement(1233..>2759)
                     /locus_tag="VLD58_14535"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HSB55573.1"
                     /translation="LRRFVSESREWQALWASLWTSVASVVLAAMLGIPLAFLFERFDF
                     PGRRLLGGLVALPVVLPPLVGVIAFLFLYGETGFVARMVQAILRLEDPPWRLEGAWAI
                     LLVHAYSMYVYFYLFTRAGLAALDPAAHEAAASLGADRWTTLRRVTLPLLAPSLRGAA
                     LLTFMTALASFSAPYIFGGGFRVMTTQIVFTRLNGDYGMAMVQTMVLSVMALAGLWLT
                     GTSGPSTGNAGGKGVAPVRNLIQSPGLRLAATIFGWGLALLLLLPHLTLILLSFVKPG
                     TWTVETLPPAYTTGNYLALANDPERLRPLVNSLWMATLATIVALVVALYAGFVTVRRR
                     EFGAGLVERLLAVPWLVPGTVFAVALATAFGVNDPLVGRIVLVGTIWILPLAYVIRNL
                     PIASRAVLAGFRGLDPALDDASASLGASRWRTIRRVTLPLLRPAVAAGATLAFVTALG
                     DFVTSIILYTYDTRPLSLEILSSLRQGDVGVAAAYGVLLMVLAGAVFSFGSERRVLSR
                     "
BASE COUNT          531 a          952 c          947 g          329 t
ORIGIN      
        1 ggctaatggc taacggccat ccttcgccac cggcactggc gtctccgtcg tgtgcatcga
       61 gatctgctcg atcttgagcg acatcaaccc caccagcgcc accgtcgccg cggcgaagaa
      121 gaacggcgcc gagtggccca cccgctggaa ggcgccggtc gcgaggatcg gggccagcac
      181 ccgcgccatt ccggcgaaga actgcgccac ccccatggtc gtccccagat cctccttcgc
      241 cgccgcacgc gacatcagcg cggtggtcga cgggaagagc agcgccgtgc cgatcggcac
      301 cagcgggatg atgaccgcga gcacccagag gttgggcgcc acggtgtacg ccagcaggcc
      361 gattaccagg atgaccgtgc cggtgcgcat ggtccgcgcc tcgcccagcc gctccacgat
      421 ggggccgagc aggagggagc gcatcacgaa cgagagcaac ccgacatagc tgtagaagta
      481 gccgatcgtc tcctcggtca ccccatgctc ggcgtcgagg aacagcgcca gcaccgaggt
      541 gagcgacgca aaggcgagca tgcccacgct gtagatccag atgagccggg agaccgggcg
      601 cccgggatgc tccatgacct cggtggccgc cttgaagacc ggtttcttct tcgagccggc
      661 cgagcccggc ttcttcgact cggggagcca cttccacgca aagccgacat tgatgaggca
      721 gagcgccgcc gccacgatcc ccggggcggt agggccgaac caggcatggc tgagagagcc
      781 caccgtgggc ccgatgaaca cccctgcgct ggtcgcggcc gacaaccatc cgagcgcctt
      841 ggcccgcccc gacggcttga tggtatcggc gacataggcc tgggccacgc cggtggttcc
      901 gcctccagcg ccctggacca gccgggagag aaagaggagc cagagcgcgt cggcgaggcc
      961 aaagatgacg taggcgatgg cagaggcgaa cagcccgatc aggagcgccg gccggcggcc
     1021 gtaacggtcg gagaaccggc cccagaacgg cgccgccagc agctgcgcca ccgagaacgc
     1081 ggcagtcatc agcccgatca tttccggcgt ggccttgagc cggagggcgt agtacggcag
     1141 gagcggcagc accatcgcga agccgatcat gtcgatacag cacgtcgcga tcagcaccga
     1201 aagctgctgc agctcgggcg ggagtttctt gatcatcggg aaagcaccct gcgctcgctg
     1261 ccgaacgaga agacggcacc cgccagcacc atgagtagga ccccgtacgc cgccgccact
     1321 cccacgtcgc cttgccggag actggagaga atctcgagcg agagtggccg ggtatcgtag
     1381 gtatagagaa tgatcgaggt gacgaagtca cccagcgccg tcacgaatgc gagggtcgcg
     1441 cccgccgcca ccgccggccg gagcagcggc agggtcaccc ggcggatcgt gcgccagcgg
     1501 ctcgcgccga gcgaggcgga ggcgtcgtcc agcgcgggat ccagtccgcg gaacccggcc
     1561 agcacggcgc ggcttgcaat gggcaggttc cggatgacgt acgccagcgg gagaatccag
     1621 atggtcccca ccagcacgat ccggccgacc aggggatcgt tcaccccgaa cgcggtcgcg
     1681 agcgctaccg cgaacaccgt tcccggcacc agccacggca ccgccaggag ccgctcgacc
     1741 agtcccgcgc cgaattcgcg ccggcgcacc gtcacgaacc cggcgtagag ggccaccacc
     1801 agggccacga ttgttgcgag ggtcgccatc cagaggctgt tgaccagcgg ccggagccgc
     1861 tcgggatcat tggccagcgc gaggtaattg ccggtggtgt aggccggggg cagcgtctcc
     1921 accgtccagg ttcctggctt cacgaacgag agcaggatca gggtgaggtg cggcagcagg
     1981 agcagcagcg ccaggcccca gccgaagatc gtggccgcca gccgaagacc ggggctctgg
     2041 atcaggtttc gcaccggcgc cacgcctttg ccgcccgcat tcccggtgct ggggccgctg
     2101 gtgccggtga gccagagccc ggccagcgcc atcacgctca gcaccatggt ctgcaccatg
     2161 gccatgccgt agtcgccgtt gagccgggtg aagacgatct gggtggtcat cacccggaag
     2221 ccgccgccga agatgtacgg cgcgctgaac gaggccagcg cggtcatgaa cgtgaggagc
     2281 gcggccccac gcagcgacgg cgcgagcaac ggcagcgtca cccgccggag cgtggtccag
     2341 cgatcggcgc cgagcgatgc ggccgcctcg tgcgccgccg gatccagggc cgcgagcccc
     2401 gcccgggtga acaggtagaa gtagacgtac atcgagtagg catgcaccag caggatggcc
     2461 cacgccccct cgagccgcca cggcggatcc tcgaggcgaa gaatcgcctg gaccatccgg
     2521 gcgacgaagc cggtctcgcc atagaggaag agaaacgcga tcacgcccac cagcggcgga
     2581 agcaccaccg ggagcgccac cagcccgccg aggagccgcc ggcccgggaa atcgaatcgt
     2641 tcgaacagga aggcgagcgg aatgccgagc atggcggcga gtaccacgct cgccaccgag
     2701 gtccagaggc tggcccagag cgcctgccac tcccgcgatt cgctgacgaa gcggcggag
//
LOCUS       DATIFF010001001        14229 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2278752, whole genome shotgun sequence.
ACCESSION   DATIFF010001001 DATIFF010000000
VERSION     DATIFF010001001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 14229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14229
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2278752"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(141..1817)
                     /gene="ettA"
                     /locus_tag="VLD58_14540"
     CDS             complement(141..1817)
                     /gene="ettA"
                     /locus_tag="VLD58_14540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HSB55574.1"
                     /translation="MAGEYIFTMRDLRKVVPPSREILKGIYLSFYPGAKIGVLGSNGA
                     GKSTLLRIMAGVDKDFLGEAKPLAGTKIGYLPQEPLLDPAKDVRGNVEDGVRELRKLL
                     DDFNEISAKFAEPMSDDEMNRLLEKQGRLQDQIDHLGLWELDHKLDLAMDALRLPPGD
                     AEVSRLSGGEKRRVALCRLLLEQPDMLLLDEPTNHLDAESVAWLEKYLENFPGTVVAI
                     THDRYFLDNVAKWILELDRGAGIPWEGNYSSWLDQKQKRLATEEKQASARQKTLEREL
                     EWVRMSPKARHAKSKARIQRFEELRAESERQTEGTAEIIIPVPERLGDEVVIARDVAK
                     GFGDNLLFEKLNFALPRGGIVGIIGPNGAGKTTLFRMITGTEKPDSGTLTVGQTVKIA
                     YVDQSRESLDGSKSVYEEISGGQDELLFGTRKVNARAYCAGFNFRGSDQQKKVKDLSG
                     GERNRVHLAKLLKSGGNLLLLDEPTNDLDVDTLRALEDALLSFAGCAVVISHDRWFLD
                     RVATHILAFEGDSEVVWYEGNYQEYAADYRKRKGVDAGQPHRIKYKPLHH"
     gene            complement(2030..2320)
                     /locus_tag="VLD58_14545"
     CDS             complement(2030..2320)
                     /locus_tag="VLD58_14545"
                     /inference="COORDINATES: protein motif:HMM:NF014279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SWIB/MDM2 domain-containing protein"
                     /protein_id="HSB55575.1"
                     /translation="MATKKKAAKKASKRKPNAAFMKPVQPDAKLSEVVGSKAMPRTEL
                     TKKLWAYIKKNGLQDKKNKRNINADEALQAVFNGKKTVSMFEMTKLVSKHVK"
     gene            2545..3768
                     /locus_tag="VLD58_14550"
     CDS             2545..3768
                     /locus_tag="VLD58_14550"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSB55576.1"
                     /translation="MRVALVALLAATLQPLLHSAAAQGAAPAACTRTSGLTLPEGFCA
                     IVVARDVGRTRNVTVSPAGDVYVALANGGIAALRDANGDGIAEEIKKFGDDDGTGILW
                     HDGELWFAANTKILRWKLPSGTLVPEGNPETIVDGLPNGGHFAKTIARLGGDTLIVAI
                     GSATNSCQRSDRSARSPGIDPCTELETRGGLWQFSAARAGQKEADGKRFATGLRNPEA
                     IAVEPGSGRLYASPHGRDQLSANWGYTDEQNAELPAEEFVQVEPGDDFGWPYCYYDWQ
                     KERKVLSPEYGGDGEKVGRCSDKKAPLLGLPGHWAPMAIAFNGGRQFPSEYAGGAFIA
                     FRGSWNRAPLPQAGYRVEFVPFRDGRPTGTHSRFAASASGETGLRATGVAFGPDGSLY
                     ISGENSGTIWRVMAQ"
     gene            3825..4043
                     /locus_tag="VLD58_14555"
     CDS             3825..4043
                     /locus_tag="VLD58_14555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55577.1"
                     /translation="MKHALLAMVLATAAPAALAAQDTIPLKVGDVAPEFTLRAATQGG
                     VEASPVKLSDFRDQTVVIAFFYKARTKG"
     gene            4053..4376
                     /locus_tag="VLD58_14560"
     CDS             4053..4376
                     /locus_tag="VLD58_14560"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HSB55578.1"
                     /translation="MDAYRDQYATLFRGGKKVVLLAVSADPDTALASWARDKQYPFRF
                     LSDPDGAVGRKYGAWEPKYKLDNRTLYVVGPDGKISYVADPFQEIDPKAYTSLDAAIA
                     KASGK"
     gene            4448..4786
                     /locus_tag="VLD58_14565"
     CDS             4448..4786
                     /locus_tag="VLD58_14565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55579.1"
                     /translation="MRLYQMFGSILALGLVAAAPVAAQQPDGPGRQRHEVRHERREVR
                     QDKRELRGDRRELRGDRREFRRERREGDARGMRHERRELRRDGRDLHRDHRDLRQDRR
                     ELRRERRGDI"
     gene            4887..6374
                     /locus_tag="VLD58_14570"
     CDS             4887..6374
                     /locus_tag="VLD58_14570"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HSB55580.1"
                     /translation="MALLSLGLHLLPHPGYDFHRDELFYLAMGEHLSLFRMGFPPLIA
                     LLAQLARALPLDLLTAIRLLPALAGAMLTVLAALIAQAMGGSRQAQLVAAVATLAAPL
                     FLRAATLFQPVVFEQVWWAIAVLAITHLLAGRSRRWWLALGLALGLGALTKFSVAFLG
                     VGVLAAVLASPLRRDLRTRWPWLALGIATVLALPSLLGQVTWGWPFFAQMRALREHQL
                     GHFSRVDFVTGQFLLLGPGGPLWLIGMAALFFAASLRVFRPLGVLALTVFLLLLLSGG
                     KEYYYGPMLPALIAAASTLFGAWLLRGRRTAFLVGVLVLLLVGGGALLPIGIPLLPPE
                     KLARYSAAVGVTQATRTNYGTTLPLPQDFADMTGWPEQVESVAEVFHALSPADQAQAV
                     ILGNNYGRTAAIALYGPKLGLPYPVSRHGDFYFWGTGGKTGEVTIVVGGSVEALRAYW
                     SEVTEAGRSSNPWGVDEEQSVPIFVCRRPKEDLQAVFHKLGPYWG"
     gene            complement(6418..7689)
                     /gene="thrC"
                     /locus_tag="VLD58_14575"
     CDS             complement(6418..7689)
                     /gene="thrC"
                     /locus_tag="VLD58_14575"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HSB55581.1"
                     /translation="MASWQVCGSCGERLSELDPATRCACGGLLEIQHDRPMEDGVSLR
                     RLFDERRSHNGELDLSGVWRYRDLVLPNGANYAVTHPEGNTPLLRRPAIAEFAGLSEL
                     QIKHEGHNPTGSFKDRGMTVAVTQARRIAAPAVACASTGNTSASLAAYAAQAGLTALV
                     FVPAGQVALGKLSQSLAYGAKTLLVRGDFDDCLRLVQEASTQLGVYLVNSINPFRLEG
                     QKTIVLELLHQLRWHSPDWIVLPAGNLGNTAAFGKALREAHAWGLIEKVPRLAAVQAA
                     GAGPFAQAYNENFARRLTVKAETIATAIKIGDPASWDRAVRSIRETDGVVTAVSDAEI
                     LEAKAVIDAAGVGCEPASAASVAGAKQLVSRGVIARNARVVAVLTGHVLKDPGALITY
                     HQDTEPAPARANRPVEIEAKVSEVERVLRGR"
     gene            complement(7689..8630)
                     /locus_tag="VLD58_14580"
     CDS             complement(7689..8630)
                     /locus_tag="VLD58_14580"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: protein motif:HMM:TIGR00191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006566 - threonine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HSB55582.1"
                     /translation="MSAVGERLRAFAPGSVGNIGPGLDIMGLAVTGRGDVVEVGLRDG
                     PGIEVLDAGHPDLPRDAAHNTAAVAAATALRLGGQNDTGLSISITKGLPLSGGQGGSA
                     ASAVAGAVATNALLQLGLSEHQLVECALAAEAQVAGRHLDNIVPSLVGGIVLIRDAAR
                     YDYTRIEAPRGLKVVLAQPDQRLRTAEGRSVLPTEISREVALYQAAQCAAMILAFTTN
                     DLPLLRRAVDDRIAEPARAPLLPGFTRAKEAALEAGALGCSISGSGPTAFAFAGDQAD
                     ALEIAAAMQAAYEAEGVGCSTRICEVSAEGARVIEEG"
     gene            complement(8627..11140)
                     /gene="thrA"
                     /locus_tag="VLD58_14585"
     CDS             complement(8627..11140)
                     /gene="thrA"
                     /locus_tag="VLD58_14585"
                     /EC_number="1.1.1.3"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: protein motif:HMM:NF006959.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009067 - aspartate family amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase I"
                     /protein_id="HSB55583.1"
                     /translation="MARPGQPLEVHKFGGASLADAAAIRHAVAIIRDRAFPRVIVVSA
                     MGGVTDLLLGVAAASQKGDLDTAGQSARTLRDRHHAAARSLVPAGAARTELLAFIDSQ
                     ISELETLAKGLSILRELTPRTSDFLVARGERLSAQLVTAALTASGVKAKYLDAPLVIR
                     TDGNFGNASPDLEQTDQNIRKALKPMLAQGVTPVITGFIGCSPTGEVTTLGRGGSDLT
                     ASLVGRAMGAARVNLWKDVPGLLTADPRVVPDARVLTQLNVREAAELAYYGAKVLHPR
                     ALIPVIGRKVPLFVRPFAEPAREGTEVSERETDLSVPVKALSAASSQALLTVEGNGML
                     GVPGVAARTFAALQREAISVSLISQASSEHSICFCVPAESADAARRCLSEVFADEIAH
                     HEIDGVSVKSGVATLAVVGLGMAGTPGVAQRVFSALASNAINVIAIAQGSSELNISVV
                     VEEAHAKAAQQAIHAAFQLGKLGGGSVSPRDRLDVFLLGFGRIGRSLSDLVAELPANG
                     PKVRIVGVADRSGVVFDPQGLSSHRLTSIAREKAKGHSLKHLEGGRSEKAEDGVCRAV
                     KHALSHPVLVDVTADETTDVLRAALTHGMDVVLANKKPLAGPADESEGLLALAAQHGR
                     RIRHEATVGAGLPVMDTFAKLQETGDEVVSIEGCVSGTLGFLLSQLESGRKFSQALTA
                     AMDAGYTEADPRDDLSGADVARKALILGRLMGFKGEPASVVTESLVPSDARGLPLKTF
                     LARLSSWDYEWAERVRSAKAKGNVLRYVATVTPRRLRVGLSALPATSPFASLQGTDNQ
                     IVFTTTRYREHPLVIRGPGAGPLVTAAGVLNDILALARR"
     gene            11229..11747
                     /locus_tag="VLD58_14590"
     CDS             11229..11747
                     /locus_tag="VLD58_14590"
                     /inference="COORDINATES: protein motif:HMM:TIGR03546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03546 family protein"
                     /protein_id="HSB55584.1"
                     /translation="MLTLLKLLQSLFKTLHSEGTPGQVAAGIMLGAGIGLTPLMSAHN
                     LVLFAAIVLLNVSFGGGMLGMALFTPVGFLLDPLFDKVGLALLKAAPLQGLWTDWYNI
                     PLVPYTNFNNSVTLGSFVVWLVLTIPLYFLGKVAIARYRATYGARVMNSKLMKGIKAS
                     RVYNVYSWFRPE"
     gene            11744..13573
                     /locus_tag="VLD58_14595"
     CDS             11744..13573
                     /locus_tag="VLD58_14595"
                     /inference="COORDINATES: protein motif:HMM:TIGR03545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03545 family protein"
                     /protein_id="HSB55585.1"
                     /translation="MKKRFKIFRWKAVGPLLLFLLILVVLWVIFADTIARVQAEDELS
                     STLGTEVDIGSLRIREADAAVDIGDLAIADPRDRMKNLFEAGTITVDVDPLPLAEKKI
                     IIDQVKLSGLRFLTPRKTPARPADPNSPAGRLLAETRAWAREKFQFPKLALGRIDTVK
                     SLVLNPEELGTVKAAKTFLGSVDSTRTAFEKSLGDLQIKQLVDSSTALATQLARTDPK
                     TLGIAGVKTTITTVQKTIDRIKRTRSRLDTLQLTAKNSLGSLQQGLADVNAARLKDYA
                     FAKGLLQLPSFASPDIGASLFGQQSTDYFQQALYYARIAEKYIPPGLQPWNRPGPKRT
                     RMSGTTVEFPKMKEYPRFLLRQGDIDLALGAQEQNAFKATFANLTSQPALLGQPATLS
                     ASGRIAGDNPISVNIGALSRHFGNAPKDSLLAQVGGVKLPAFPFPGLPFAVNPGRSTL
                     GLGFTLAGNRIAGSWEIASDQVSWQADSTRLKSASLVESTVWRVISGLTQLRVRAELG
                     GTVESPTLKVSSNLDDAIAARLQGLVGEELAKAEAKARAAVDKLVDQQVAVLQTKVNE
                     LQTQALARLPVERGQLDDVQKQLEAQVKRLAGSVTGGIQLPKF"
     gene            13686..>14229
                     /locus_tag="VLD58_14600"
     CDS             13686..>14229
                     /locus_tag="VLD58_14600"
                     /inference="COORDINATES: protein motif:HMM:NF017072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55586.1"
                     /translation="MRIAVPRETAPGERRVALVPESVKKLAQAGYEVAVEAGAGESAG
                     FDDKAYRDAGATLQTDAPGLVGSADILLKVGPPAWGATRDEVGWMREGAIYLGSLMPL
                     RNLETVSALAARKVTAFSTDAIPRTTRAQAMDTLSSMANIAGYKGVLLAAAELNRYFP
                     MLTTAAGMIFPAKVFVIGAGV"
BASE COUNT         2126 a         5002 c         4736 g         2365 t
ORIGIN      
        1 ggggaaggta gtcgattccg ggggggcggg gaagaacgat ccgggtcccg agtcccgggt
       61 tccacgtcgt tccaggcggc cctcccccgc tcggagaacg cggctggcgg aacggcggtc
      121 tcggaacccg gaactcggaa ctagtgatgc agcggcttgt acttgatccg gtgcggctgg
      181 cccgcgtcca cgcctttccg cttcctgtag tcggcggcgt actcctggta gttgccctcg
      241 taccacacca cctcgctgtc gccctcgaag gccaggatgt gagtggcgac ccggtccagg
      301 aaccagcggt cgtggctgat caccaccgcg cagccggcga aggagagcag ggcgtcttcc
      361 agcgcgcgca gggtgtcgac gtcgaggtcg ttggtcggct cgtcgagcag gagcaggttg
      421 ccgccgctct tgaggagctt ggccaggtgc acccggttcc gctcgccgcc ggagagatcc
      481 ttcaccttct tctgctggtc gctgccccgg aagttgaagc cggcgcaata ggcccgggcg
      541 ttcactttgc gggtgccgaa caagagctcg tcctgcccgc ccgagatctc ctcgtagacg
      601 ctcttgctgc cgtcgagtga ttcccggctc tggtccacgt aggcgatctt caccgtctgg
      661 cccacggtca gggtgccgct gtcgggcttc tcggtgccgg tgatcatccg gaagagcgtg
      721 gtcttgccgg cgccgttcgg gccgatgatc ccgacgatgc cgccccgcgg cagcgcgaag
      781 ttgagcttct cgaagagcag gttgtcgccg aatcccttgg cgacatccct ggcgatcacc
      841 acttcatcgc ccagtcgctc cggcaccggg atgatgattt cggcggtgcc ttcggtctgc
      901 cgctcgctct cggcccggag ttcctcgaac cgctggatcc tggccttgct cttggcgtgc
      961 cgcgccttgg gcgacatccg cacccactcg agctcgcgct ccagggtctt ctgccgggcg
     1021 ctggcctgct tctcctcggt ggcgagccgc ttctgcttct ggtcgagcca ggaggagtag
     1081 ttcccctccc acggaatccc cgcgccccgg tccagctcca ggatccactt ggccacgttg
     1141 tcgaggaagt accggtcgtg ggtgatcgcc acgacggtgc cggggaagtt ctccaggtac
     1201 ttctcgagcc acgccaccga ctcggcgtcg aggtggttgg tcggctcgtc gaggagcagc
     1261 atgtcgggct gctccagcag cagccggcag agcgccaccc ggcgcttctc gccgcccgag
     1321 agccggctca cctcggcgtc gcccggcggg agccggagcg cgtccatggc cagatcgagc
     1381 ttgtggtcca gctcccagag cccgagatgg tcgatctggt cctgcagccg cccctgcttc
     1441 tcgagcagcc tgttcatctc gtcgtcgctc atcggctcgg caaacttcgc cgagatctcg
     1501 ttgaagtcgt cgagcagctt gcggagctcg cggaccccgt cctcgacgtt gccacgcacg
     1561 tccttcgcgg ggtcgagcaa cggctcctgc ggcaggtagc cgatcttggt ccccgcgagc
     1621 ggcttcgcct cgccgagaaa gtccttgtcg actcccgcca tgatgcgcag cagcgtcgac
     1681 ttgccggcac cgttggagcc gagcacgccg atcttggcgc cggggtagaa cgagaggtag
     1741 atccccttga ggatctcgcg ggaagggggc acgacctttc tgaggtcgcg catcgtgaag
     1801 atgtattcgc cggccatagg gcggggaata taggtgaggc ttggtgtggg agaaggtggc
     1861 ctgcggtcgg gggtcgggcg tcgggggtcg ggagcacatc gtctgagccc ctgacccccg
     1921 acctcaagca ggccgccctt caccgcgacc ttccctcgca cccacaaaca cgaagggcgc
     1981 cccgacggga gcgcccttga gtgcgtgctg gcggcagcgc cgccggccct tacttcacgt
     2041 gcttgctcac cagcttggtc atctcgaaca tcgagacggt cttcttgccg ttgaacacgg
     2101 cctggagcgc ctcgtccgca ttgatgttgc gcttgttctt cttgtcctgg aggccgttct
     2161 tcttgatgta ggcccagagc ttcttggtga gctcggtgcg gggcatcgcc ttgctgccga
     2221 cgacttcgga cagcttcgca tcgggctgca ccggcttcat gaacgccgca ttcggcttcc
     2281 gcttgctcgc cttcttcgcc gccttcttct tggtggccat cgagtgcctc cgttataggg
     2341 actggatccg gcgctcgagc cgccgcgccg tgcgagagca aaactaaagg gttacctctc
     2401 gagtgcaaga gggaaaatcg cgtttttccc tctgagaaac cccgaatttc cctcggaaac
     2461 ggcggttcgt ccctcggacc gggcacccgt cgccggtccg ggctatgttc ccccgggtac
     2521 cccatccgta cgaggagcag caccatgcgc gtcgctctcg tggccctcct ggcggccact
     2581 ctccagcccc tgcttcactc ggccgcggcg cagggcgccg cccccgcggc ctgcacccgc
     2641 accagtggac tcaccctccc cgaggggttc tgcgccatcg ttgtcgctcg ggatgtcggc
     2701 cgcacccgga acgtcacggt gtcccctgcc ggagacgtct acgtggcgct cgccaacggg
     2761 ggcattgccg ccctgcggga cgccaatggc gacggtatcg ccgaggaaat caagaagttc
     2821 ggggacgacg acgggaccgg gattctctgg cacgatggcg agctctggtt cgcggccaac
     2881 accaagatcc tgcgctggaa actcccctcc ggcaccctcg tcccagaggg aaatcctgag
     2941 acgattgtcg atggactccc gaacggcggc cacttcgcca agaccatcgc ccgcctcggt
     3001 ggcgataccc tgatcgtcgc catcggctcg gccaccaaca gctgccagcg ctccgaccgg
     3061 tccgcccgct cgcccgggat cgatccctgc accgagctgg aaacccgggg cgggctctgg
     3121 cagttcagcg ccgccagggc cgggcagaag gaagctgacg gcaagcggtt cgccaccggg
     3181 ctccgcaatc ccgaggcgat cgccgtcgag cccgggagcg gcaggctcta cgcctcgccg
     3241 cacggccggg atcagctcag cgccaactgg ggctataccg acgagcagaa cgccgagctg
     3301 ccggctgaag agttcgtgca ggtggagccg ggcgacgact tcggctggcc ctactgctat
     3361 tacgactggc agaaggagcg gaaggtgctg tctcccgagt acggcggcga cggcgagaag
     3421 gtgggccgct gcagcgacaa gaaggcgccc ctcctcggcc tgcccggcca ctgggcgccc
     3481 atggccatcg ccttcaacgg cggcaggcag ttcccgtcgg agtacgccgg tggcgccttc
     3541 atcgccttcc gcggctcgtg gaaccgcgcg cccctgccgc aggcgggcta ccgggtggag
     3601 ttcgtgccat tccgcgacgg gcgccccacc ggcacccaca gccgcttcgc ggccagtgcc
     3661 tcgggcgaaa ccgggctcag ggccaccggc gttgctttcg gtcccgacgg ttcgctgtac
     3721 atttcgggcg agaacagtgg caccatctgg cgggtgatgg cgcagtaggc ggtcaggcgg
     3781 ccaggcgtcg gtgggcctgg cgactctcac agaacggagg cgaagtgaag cacgcgttgc
     3841 tcgcaatggt actcgcaacc gcggcccctg ctgccctcgc ggcgcaggac acgataccgc
     3901 tcaaggtggg cgacgtcgcg ccggagttca ccctccgcgc cgccacccag ggcggcgtcg
     3961 aggcctcacc ggtcaagctc agcgatttcc gcgatcagac cgtggtcatc gccttcttct
     4021 acaaggcgcg gaccaagggc tgaaccatcc aaatggacgc gtaccgtgat cagtacgcga
     4081 cgctctttcg tggtggcaag aaggtcgtgc tcctcgccgt gagcgcggat cccgacaccg
     4141 ccctggcctc ctgggcccgg gacaagcagt accccttccg cttcctgagc gaccccgatg
     4201 gggcggtggg acggaagtac ggggcgtggg agccgaagta caagctggac aaccggacgc
     4261 tctatgtcgt gggaccggac gggaagatca gctacgtggc cgacccgttt caggagattg
     4321 atcccaaggc gtacaccagc ctggacgcgg ccatcgccaa ggcgtccggg aagtgattcc
     4381 ggtcaccggc ttaacagcgg ggccgggctc tcgtctctca gggtgaaccc acacctgagg
     4441 tcggcatatg cggttgtacc agatgtttgg atcgatcctg gcgcttggac tggtcgctgc
     4501 cgccccggtg gcggcccagc agcccgacgg gccgggccgc cagcgccacg aggttcggca
     4561 cgagcgccgg gaggtccgcc aggacaagcg tgagcttcgg ggcgaccgcc gcgagctccg
     4621 gggcgaccgg cgcgagttcc gccgggagcg gcgcgaaggc gatgcgcgcg gcatgcgcca
     4681 cgaacggcgg gagctccgcc gcgacgggcg tgacctccac cgcgatcacc gcgacctgcg
     4741 gcaggatcgc cgggaactgc gccgcgaacg ccggggagac atctgaccct ctgtaagccg
     4801 tcgtcgccgt ccgcatgacc atcgaccctc ctcttccgca gccaaaggga gggtcgattc
     4861 gttccctcgg ccccgggatc tgggtcgtgg cactgctctc ccttgggctg catttgctgc
     4921 cccatccggg gtacgacttc caccgcgacg agctcttcta cctcgcgatg ggcgagcacc
     4981 tctcgctctt ccggatgggc tttcctcctc tcatcgcgct gctggcgcag ctcgcgcggg
     5041 cgctgccgct cgacctgctc accgccatcc ggctcctgcc cgcgctggcc ggcgcgatgc
     5101 tgacggtgct ggctgctctc atcgcgcagg ccatgggcgg cagccggcag gcacagctgg
     5161 ttgccgcagt ggccactctc gccgccccgc tctttctccg ggcggccacc ctcttccagc
     5221 cggtggtgtt cgaacaggtc tggtgggcca ttgcggtcct ggccatcacc cacctgctcg
     5281 ccggaaggtc gcgccgctgg tggctggccc tcggcctggc cctcggcctc ggtgctctga
     5341 ccaagttcag tgtggcattt ctcggggtcg gagtcctggc ggcggtcctg gcttcgccgc
     5401 tccggaggga ccttcggacc cgctggccgt ggctggcact gggcatcgca acagtgctgg
     5461 cactacccag ccttctcggg caggtgacgt ggggctggcc cttcttcgcg cagatgcgtg
     5521 ccctccggga gcaccagctg gggcacttca gccgggtgga cttcgtcacc ggccagttcc
     5581 tgctgctcgg ccccggtggg ccgctctggc tcatcggaat ggcggcgctc ttcttcgcgg
     5641 cctcgctccg tgtattccgg ccgctcgggg tactggctct gaccgtgttc ctcttgctgc
     5701 tcctgtccgg gggaaaggag tactactacg gcccgatgct cccggccctg atcgccgcgg
     5761 cgtcgacgct gttcggggcc tggctcctcc gcggccggcg tactgcgttt ctggtcggcg
     5821 ttctcgttct gctgctggtt ggcggagggg cgctcctccc gatcggcatt ccgctgcttc
     5881 cccccgagaa actggcgcgc tactcggccg cggtcggcgt gacccaggct acccgcacca
     5941 actatggcac caccctgccc ctgccgcagg acttcgccga catgaccggc tggcccgagc
     6001 aggtggagtc ggtcgccgag gtctttcatg cactttcgcc agcggaccag gcccaggcgg
     6061 tgatcctcgg aaacaactac ggccgcaccg ccgcgatcgc gctctacgga ccgaagctcg
     6121 gcctgccgta cccggtgagc cgtcacggag acttctattt ctgggggacc ggcgggaaga
     6181 ctggcgaggt gacgatcgtg gtgggtgggt cggtggaggc gctgcgagcg tactggagcg
     6241 aggtcaccga ggcggggcgg tccagcaatc cctggggcgt ggacgaggag cagagtgtgc
     6301 cgatcttcgt atgccgcagg ccgaaggagg acctccaggc tgtgttccac aagcttggcc
     6361 cgtactgggg gtgagccaca agctacttta cggttaacgg ctaacggcta acggctgtta
     6421 ccgcccccgc agcacccgct ccacctcact caccttggcc tcgatctcca ccgggcggtt
     6481 ggctcgtgcc ggcgccggct cggtgtcctg gtgataggtg atcagcgcgc ccgggtcctt
     6541 gagcacatgg cccgtcagca ccgccaccac ccgggcgttg cgtgcaatca cgccccggct
     6601 caccagctgc ttcgctcccg cgacgctcgc cgcactcgct ggttcgcatc ccacgcccgc
     6661 cgcgtcgatc accgccttgg cctccaggat ctcggcatcg ctcaccgcgg tgaccactcc
     6721 gtcggtctcc cggatcgagc gcaccgcccg gtcccatgac gccgggtcgc cgatcttgat
     6781 ggccgtggca attgtctccg ccttcaccgt gagccgccgg gcgaagttct cgttgtaggc
     6841 ctgcgcaaag ggaccagcgc cggctgcctg taccgcggcc agccggggca ccttctcgat
     6901 cagtccccac gcgtgcgcct cgcggagcgc tttgccaaag gccgccgtat ttcccaggtt
     6961 gcccgcgggc agcacgatcc agtcggggga gtgccaccgg agctgatgca gcagctccag
     7021 cacgatggtc ttctgcccct cgagccggaa cggattgatg ctgttcacca ggtagacgcc
     7081 gagctgggtc gaggcctcct gcaccagccg gaggcagtcg tcgaagtcgc cccggaccaa
     7141 gagcgtcttt gcgccatagg cgagggactg cgagagcttg ccgagcgcca cctgaccggc
     7201 cggcacgaag accagggcgg taagccccgc ctgcgccgcg taggccgcga gtgacgccga
     7261 ggtgttgccg gtcgaggcgc aggcgacggc cggggctgcg atccgccgcg cctgggtcac
     7321 cgccacggtc atgccccggt ccttgaacga accggtggga ttgtggccct cgtgcttgat
     7381 ctggagttcg ctgagcccgg caaattccgc gatcgcgggc cggcggagca ggggagtgtt
     7441 cccctcggga tgggtcaccg cgtagttggc cccattggga aggaccaggt cccgatagcg
     7501 ccacaccccg gacaggtcga gttcgccgtt gtggctccgc cgctcgtcga acagccgccg
     7561 cagcgagacc ccgtcctcca tcgggcggtc gtgctggatc tcgagcagtc cgccacaggc
     7621 gcaccgggtt gccgggtcca gttcactcag ccgctcgccg cagctgccgc agacctgcca
     7681 gctcgccatc acccctcctc gatcacccgg gcaccctcgg cgctcacctc gcagatccgg
     7741 gtgctgcagc cgaccccttc ggcctcgtag gccgcctgca tcgccgcggc gatctcgagc
     7801 gcgtcggcct ggtcgccggc gaaggcaaac gcggtgggcc cgctgccgga gatggaacac
     7861 ccgagggcgc cggcctccag cgccgcctcc ttggcccggg tgaaccccgg caggagcggg
     7921 gcccgtgccg gctccgcgat ccggtcgtcg accgcgcggc ggagcagagg cagatcgttg
     7981 gtggtgaagg cgagaatcat cgcggcgcac tgggccgcct ggtacagcgc cacttcgcgg
     8041 gagatctcgg tcgggagcac cgagcgtccc tccgcggtgc ggagccgttg gtcgggctgc
     8101 gccagcacca ccttgaggcc gcggggcgct tcgatacggg tgtagtcgta ccgcgcggcg
     8161 tcgcggatca ggacgatacc gcccaccagc gacggcacga tgttgtcgag atgccgcccg
     8221 gccacctgcg cctcggccgc gagggcgcat tcgaccagct gatgctccga gaggccgagc
     8281 tggaggaggg cgttggtcgc gaccgcgccg gccaccgccg aggcggcgct tccaccctgg
     8341 cccccggaga gcggcaggcc cttggtgatg ctgatcgaaa gaccggtgtc gttctgtcca
     8401 ccgagcctca gggccgtcgc ggccgcgacc gcggcggtgt tgtgagcggc gtccctcggc
     8461 aggtcagggt gacccgcatc cagcacttcg atgccgggtc cgtcacgcaa ccctacttcc
     8521 accacgtcgc cccggccggt cacggccagg cccatgatgt cgagtcccgg tccgatgttg
     8581 ccgactgagc ccggggcaaa cgcgcggagc cgctcaccca cggcgctcac cgccgcgcca
     8641 gggccaggat gtcgttgagc actccggccg cggtcaccag cgggcccgcg cccggaccgc
     8701 ggatcaccag cggatgctcc cggtaccggg tggtggtgaa gacgatctgg ttgtcggtgc
     8761 cctggagcga agcgaaaggg ctggtggccg ggagcgccga gagccccacc cggagccgcc
     8821 gcggcgtcac cgtggcgacg taacggagca cgttaccctt cgccttggcg gagcggaccc
     8881 gttcggccca ctcgtagtcc cagctgctga gccgcgcgag gaaggtcttg agcggcaggc
     8941 ccctggcgtc gctcggcacc agcgattcgg tgaccaccga ggccggttcc cccttgaagc
     9001 ccatgagccg ccccaggatc agcgccttcc gggccacgtc ggcgccggag agatcgtcgc
     9061 gcggatcggc ctcggtgtag ccggcgtcca tcgccgcggt gagcgcctgg gagaacttgc
     9121 gccccgactc gagctgcgaa agcaggaacc ccagcgttcc cgaaacgcat ccctcgatgc
     9181 tcaccacctc gtcgccggtc tcctgcagct tggcgaaggt gtccatcacc gggaggccgg
     9241 cgcccaccgt ggcctcgtgc cggatgcggc gcccgtgctg cgccgccagc gccagcagcc
     9301 cttccgattc atcggccggg ccggccagcg gcttcttgtt ggcaagcacc acgtccatcc
     9361 cgtgggtgag cgcggcccgg agcacatcgg tggtctcgtc ggcggtgacg tccaccagca
     9421 ctggatgcga cagggcatgc ttcaccgccc ggcatacccc gtcctccgcc ttctccgacc
     9481 ggcccccttc gaggtgcttg agcgagtgtc ccttggcctt ttcccgcgcg atcgaggtca
     9541 gccggtggga cgagagcccc tggggatcga acaccacccc gcttcggtcc gccacgccca
     9601 cgatccgcac cttgggcccg ttggccggca gctcggccac caggtccgac agactccgcc
     9661 cgatgcggcc gaagccgagc aggaagacat ccagccggtc gcgggggctc acgctgccgc
     9721 cgcccagctt cccgagctgg aacgcggcgt gaatggcctg ctgggccgcc ttggcgtgcg
     9781 cttcttcgac caccaccgag atgttgagct cgctcgaccc ctgcgcgatg gcgatcacgt
     9841 tgatcgcatt ggacgccagc gccgagaaga cccgctgcgc cacgcccggc gtgccggcca
     9901 tgccgaggcc caccactgcc agcgtcgcga ccccggactt gacgctgacg ccgtcgatct
     9961 catggtgcgc gatctcgtcc gcgaagactt ccgacaggca ccgccgcgcc gcgtccgcgc
    10021 tctcggccgg gacacagaag cagatcgaat gttccgacga ggcctggctg atgagcgaga
    10081 ccgagatggc ttcgcgctgg agcgccgcga aggtccgggc cgccaccccg ggcacgccga
    10141 gcatgccgtt gccttcgacg gtaagcaggg cctggctcga tgcggccgat agcgccttca
    10201 ccggcacgga gagatcggtc tcccgctccg agacttcggt gccttccctt gccggttccg
    10261 cgaacggacg cacaaacagc ggcaccttcc ggccgatcac cggaatcagc gcccgcgggt
    10321 gcagtacctt ggccccgtag taggccagct ccgccgcctc ccgcacgttg agctgagtga
    10381 gcacccgggc atcgggcacc acccgcgggt cagcggtgag cagtcccggc acatccttcc
    10441 agagattcac ccgcgccgca cccatcgccc ggcccaccag ggaggcggtc agatccgagc
    10501 caccccggcc cagggtcgtg acctcgccgg tggggctgca gccgatgaat ccggtgatga
    10561 ccggagtgac accctgcgcc agcatcggct tgagcgcctt ccggatgttc tggtcggtct
    10621 gctccaggtc gggcgaggca ttgccgaaat ttccgtcagt gcggatcacc agcggggcgt
    10681 cgaggtactt ggccttcacg ccggacgccg tgagcgccgc cgtcaccagc tgggcggaca
    10741 gccgttcccc ccgggccacc aggaaatcgc tggtcctggg cgtcagctcc ctgaggatgc
    10801 tgagtccctt ggccagggtc tcgagttcgc tgatctggct gtcgatgaag gcgaggagct
    10861 cggtccgggc cgcccccgcg gggaccagag acctggcggc cgcgtgatgc cggtcacgca
    10921 gggtcctggc cgactgtccc gcggtgtcga ggtcgccctt ttgtgaggcg gcggccacgc
    10981 cgagcaggag gtcggtgacc cctcccatgg ccgagaccac gatgacgcgg gggaaggcgc
    11041 ggtcgcggat gatggcaacg gcgtgacgga tcgcggcggc gtcagccagc gacgcgccgc
    11101 caaatttgtg aacttcgagc ggttgtccgg ggcgggccat aggggcggaa gattacaccg
    11161 gaccctcttg gccgggaagc ttgttcacgg ccttcccgca tgccctgtgt ccagcctaag
    11221 ttgggagcat gttgacgctc ctcaagctgt tacagtcgct cttcaagact ctccactccg
    11281 aggggacccc cggccaggtt gcggccggca tcatgctggg ggcgggcatc gggctcaccc
    11341 cgctcatgtc ggcccacaac ctggtgctgt ttgcggcgat tgtgctgctc aacgtctcct
    11401 ttggcggggg gatgctgggg atggcgctgt ttaccccggt gggctttctg ctcgacccgc
    11461 tgttcgacaa ggtcggactc gcgctgctca aggcggcgcc gctccaggga ctctggaccg
    11521 actggtacaa catcccgctg gtgccctaca ccaacttcaa caacagcgtc accctcggga
    11581 gcttcgtggt ctggctggtg ctgaccattc cgctctactt cctcggcaag gtggccatcg
    11641 cgcggtaccg cgccacctac ggcgcgcggg tgatgaactc gaagctcatg aagggcatca
    11701 aggcatccag ggtctacaac gtctacagct ggttccggcc cgaatgaaaa agcgcttcaa
    11761 gatcttccgc tggaaggcgg tcgggccact gctcctgttt ctcctcatcc tcgtggtgct
    11821 gtgggtgatc ttcgccgaca cgatcgcgcg ggtgcaggcg gaggacgagc tctccagcac
    11881 gctggggacc gaggtcgaca tcgggagcct ccggatccgc gaggccgacg ccgccgtcga
    11941 catcggcgac ctcgccatcg ccgatccccg tgaccggatg aagaacctgt tcgaggccgg
    12001 caccatcacg gtcgacgtcg atcccctgcc gctcgccgag aagaagatca tcatcgacca
    12061 ggtgaagctc tcgggactcc ggttcctgac gccccgcaag actcccgcgc gtcccgccga
    12121 tcccaacagc ccggccggcc ggctgctcgc cgagacgcga gcctgggcca gggagaagtt
    12181 ccagttcccg aagctggcgc tggggcggat cgacacggtg aagagcctgg tgctcaatcc
    12241 cgaggaactc ggcacggtca aggccgccaa gaccttcctc ggctcggtcg actccacccg
    12301 caccgccttc gagaagagcc tcggtgatct ccagatcaag cagctggtcg attcgtcgac
    12361 tgcgctcgcg acccagctcg ccaggaccga tcccaagacg ctgggtattg ccggggtgaa
    12421 gaccaccatc accacggtgc agaagacgat cgaccggatc aagcggaccc ggagccggct
    12481 cgacaccctg cagctcacgg cgaagaactc gctcggcagc ctccagcagg ggctggccga
    12541 cgtgaacgcc gcccggctca aggactatgc ctttgccaag gggctcctcc agctgccgag
    12601 cttcgcttcg cccgacatcg gcgcgtcgct cttcggacag cagagcaccg actatttcca
    12661 gcaggcgctc tactacgcca ggatcgcgga gaagtacatc ccgccggggc tccagccctg
    12721 gaaccggccc ggacccaagc gtacccgcat gtcggggacc acggtcgagt tcccgaagat
    12781 gaaggagtac ccgcgcttcc tcctccgtca gggtgacatc gacctggcgc tcggcgcgca
    12841 ggaacagaac gccttcaagg ccacgttcgc gaacctcacc tcgcagccgg cgctcctggg
    12901 ccagccggcc acgctctcgg ccagcgggcg catcgcgggc gacaatccga tctcggtgaa
    12961 catcggcgcg ctttcgcggc acttcggcaa cgcgccgaag gactcgctcc ttgctcaggt
    13021 gggcggcgtg aagctcccgg cgttcccgtt ccccgggctc ccctttgcgg tgaatcccgg
    13081 caggagcacg ctcggcctgg gcttcacgct ggcggggaac cgcatcgccg ggtcgtggga
    13141 gatcgcgtcc gatcaggtga gctggcaagc cgactcgacc cggctcaagt cggcatcgct
    13201 ggtggagagc accgtgtggc gggtgatttc cggactcacc cagctccggg tcagggccga
    13261 gctgggcggc accgtggaga gtcccacgct caaggtgagc tccaacctcg acgacgccat
    13321 cgccgcccgg ctgcaggggc tcgtgggtga agagctggcc aaggcggagg ccaaggccag
    13381 ggccgcggtg gacaagctgg tggatcagca ggtcgcagtg ctccagacca aggtcaacga
    13441 gcttcagacc caggcgctgg ccaggctccc ggtcgagcgg ggccagctcg acgacgtgca
    13501 gaagcagctc gaggcgcagg tcaagcgact cgcggggtcg gtgaccggcg gcatccagct
    13561 ccccaagttc taggggatcc ttcgcgcaca cgcagcgccc aaaagatccc tcatcgtctc
    13621 cacactcgcg cttcctcctg aatcctgtag attggcccga cccttcctca gtgcagggag
    13681 atcgcatgcg cattgctgtc cccagggaaa ccgctccggg cgaacgccgt gtggcgctgg
    13741 tgccggagtc cgtgaagaag ctggcccagg cgggctacga ggtcgcggtc gaggccggcg
    13801 ccggtgaatc cgccggcttt gacgacaagg cgtatcggga tgccggagcc accctccaga
    13861 ccgacgcccc cgggctggtg ggcagcgccg acatcctcct caaggtaggc ccgcccgcat
    13921 ggggtgccac ccgcgacgag gtgggctgga tgcgcgaagg ggccatctat ctcggctcgc
    13981 tgatgccgct ccggaacctg gagacggtgt cggccctcgc tgcccgcaag gtgaccgcct
    14041 tctccaccga cgcgatcccc cgcaccacta gagcccaggc catggacacc ctttcgtcca
    14101 tggcgaacat cgcaggctac aagggcgtgc tgctcgcggc ggctgagctc aaccgctact
    14161 tcccgatgct caccaccgcc gcgggcatga tcttcccggc gaaggtgttc gtgatcggcg
    14221 cgggcgttg
//
LOCUS       DATIFF010001002         1156 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_431618, whole genome shotgun sequence.
ACCESSION   DATIFF010001002 DATIFF010000000
VERSION     DATIFF010001002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1156
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_431618"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..270
                     /locus_tag="VLD58_14605"
     CDS             <1..270
                     /locus_tag="VLD58_14605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55587.1"
                     /translation="VRARSLARRQTLRQNIGALAPRPGLVYCGDDESAKETAAELIRD
                     AGFDPVDAGPLRIARYTEPFALLVAQLAYGGTGSPALAYRFERLG"
     gene            322..834
                     /locus_tag="VLD58_14610"
     CDS             322..834
                     /locus_tag="VLD58_14610"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HSB55588.1"
                     /translation="MLPPLDLAEAVLTAWGTNSRVTGYLIEHIPAVLWPAAVPGVPTR
                     TVRAIAAHLHNARCRWIRTLGQEHGIVAPARVDHRAVTRRQLHAALNRSGRGIAALLQ
                     LGCSRGGRIPPSKAYVWRNLPLDVGHVLTYFVAHEAHHRGQIVMVARQLNCRLPGAVT
                     AGLWQWQTRD"
     gene            910..>1156
                     /locus_tag="VLD58_14615"
     CDS             910..>1156
                     /locus_tag="VLD58_14615"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSB55589.1"
                     /translation="MNPNKALWEKGDFTEIAAFMRQSAEGLVGSLGIRPPMRVLDVGC
                     GDGTTALPLARLGADVVGIDIARNLVDAGNRRAAEAGL"
BASE COUNT          173 a          420 c          390 g          173 t
ORIGIN      
        1 gtccgggctc ggtcgctggc ccggcgacag acccttcggc agaacatcgg cgcactggcc
       61 cctcgaccgg gtctggtcta ctgcggcgat gacgagagcg ccaaggagac ggccgccgag
      121 ctgatccgcg atgccggctt cgatcccgtg gacgccgggc ccttgcggat cgcccggtac
      181 accgagccgt tcgcgctgct cgtcgcccag ctggcatacg ggggaacagg gagcccggca
      241 ctggcgtacc ggttcgagcg gctggggtaa ccatcccctt caaccagaag cggccgcgcg
      301 acctctcagg ggaggtagcc catgcttcca ccacttgacc tggcggaagc cgtcctgact
      361 gcgtggggga ccaacagccg cgtcaccggc tacctcatcg agcacatccc cgccgtcctc
      421 tggcccgcgg ccgtccccgg ggttccgacc cgcacggtca gagcgatcgc cgcccatctc
      481 cacaatgcgc ggtgccgctg gatcaggacg ctcggccagg agcacgggat cgtcgcccct
      541 gcacgggtgg atcaccgggc cgtcacccgc cggcagctcc acgcggccct caaccggagc
      601 ggccggggca tcgccgccct cctgcagctg ggttgcagcc ggggtggtcg cataccgccc
      661 tccaaggcct acgtgtggcg caacctgccc ctcgacgtcg ggcatgtcct gacctacttc
      721 gtcgcccatg aggcgcatca tcgaggccag atagtcatgg tggcccgcca gttgaattgc
      781 cgcctgcccg gcgccgttac cgccgggctg tggcaatggc agacccgtga ctagcgttcc
      841 cctgccgggc tgcggcgaag cccacggggc cgctcgccct cggcacccat ctcgtcgaac
      901 ggagcaccga tgaatccgaa caaagcgctt tgggagaagg gcgacttcac cgagatcgcg
      961 gcattcatgc ggcaatccgc ggaggggctc gtggggtctc tggggatcag gccgccgatg
     1021 cgggtcctcg atgtcggctg cggagacggc accaccgcgc tccctctcgc ccgtctcggg
     1081 gccgatgtcg tcggcatcga cattgcgagg aacctcgtcg atgccggcaa caggcgggcg
     1141 gcggaggcgg gcctcg
//
LOCUS       DATIFF010001003         1770 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1971521, whole genome shotgun sequence.
ACCESSION   DATIFF010001003 DATIFF010000000
VERSION     DATIFF010001003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1971521"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..234
                     /locus_tag="VLD58_14620"
     CDS             <1..234
                     /locus_tag="VLD58_14620"
                     /inference="COORDINATES: protein motif:HMM:NF012927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55590.1"
                     /translation="SDRIRHEAGVPTMTVGNISTAADVNTILAAGRADLVVLARAHLW
                     DPYWTRHAAAELGYPLPWPKPYATLDRYSPRPR"
     gene            389..1048
                     /locus_tag="VLD58_14625"
     CDS             389..1048
                     /locus_tag="VLD58_14625"
                     /inference="COORDINATES: protein motif:HMM:NF025736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HSB55591.1"
                     /translation="MRAESAMPSVSTVSGTAHNTVAARARIPFLAGVAGLHLACYWVV
                     TRVTRARGPDALFDTTIGLDRLIPHIPATWPFYWIAYPFVLLGAGAALLRLPNPSYRR
                     ALLALVGMTLAGALIQLVLPAQAPWPSAPAPSQLHFHQSAWIMPFATLPSMHVAYCVF
                     TAALIWAVTARRAIRGATVLVVVLVAVSTLTLKEHVILDAITGIGLGALAASWWLRGP
                     A"
     gene            1045..>1770
                     /locus_tag="VLD58_14630"
     CDS             1045..>1770
                     /locus_tag="VLD58_14630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55592.1"
                     /translation="MTATAGAVVTRNGRVAIADGGVAARRFAALPALLYRRDPSWTPP
                     LPGEERDAFDPTRNPSLHAIQCRRWILLEGDDVVGRIAGFTSAGQAGVGYFGFFECPD
                     RPDDARALLGAVEEWLGQRGCRQCFGPISVTPRDRIGMLTDGFDRPAMMFTPYNPAYY
                     PALLEGAGYTSAIGLRAYGWSPEYADPRGVARLAARASSGSGLRIRPLRLDRLQEETR
                     LVARMINSTLKGTWHFDPISELEA"
BASE COUNT          244 a          661 c          557 g          308 t
ORIGIN      
        1 agcgaccgta tccgccacga ggccggcgtt ccgacgatga cggtgggcaa tatttctacg
       61 gcagccgacg taaacaccat cctcgcagca ggacgcgccg atctggtagt gctggcccgc
      121 gcccacctgt gggacccgta ctggacccgc cacgccgcgg cagagctggg ctatcccctt
      181 ccctggccca agccctacgc gacgctcgac cgttattccc cgcgtccgcg gtagggtagc
      241 gccactccgt tcaccgtggc cgtttcgagc gcacattcct gtcctgcgca ggattgtcca
      301 ctcgacaacc ccctgaccca gccgtatact cgctagcgat cgcacatcac cagctgcagt
      361 cccactccag atcccggagc cgggccccgt gcgtgctgag tccgccatgc cgtcggtttc
      421 gactgtgtca ggcacggcgc acaacaccgt ggcggcccgg gcccgcatcc ccttcctggc
      481 aggtgtcgcg ggcctgcacc tcgcctgcta ctgggtcgtc acccgggtga cccgggctcg
      541 cggtccggac gcgctcttcg ataccaccat cgggctcgat cgcctgatcc cgcacatacc
      601 cgcgacctgg ccgttctact ggatcgccta tcctttcgtc ctcctcggcg ccggcgcggc
      661 cctgctccgg ttgccgaatc cgtcctaccg tcgcgccctc ctggccctgg tggggatgac
      721 gctcgccggc gcgctgatcc agctggtcct gccggcccag gcgccatggc caagtgctcc
      781 ggcgccgtcg caactccact ttcaccagtc agcctggatc atgccgttcg ccacgcttcc
      841 ctcgatgcac gtggcctact gtgtgttcac cgccgcgctg atctgggcgg tgaccgccag
      901 gcgagcgatt cgcggcgcga ccgtgctggt cgtggtgctg gtggcggtct cgaccctgac
      961 gctcaaggag catgtcatcc tcgacgcgat caccggaatc ggcctcggtg cgctggccgc
     1021 cagctggtgg ctcagaggac cggcttgacc gcgaccgccg gtgcggtggt gactcggaac
     1081 ggccgcgtcg cgatcgccga cggcggggtt gcggcacgac gatttgccgc gctgccggcg
     1141 ctgctctacc gccgggatcc gagctggacc ccgcccctgc cgggggaaga acgtgacgcc
     1201 ttcgacccca cccgaaatcc ctccctccac gctatccaat gccggcgctg gatcctgctc
     1261 gagggagatg acgtcgtcgg ccgcatcgcg ggcttcactt cggccggcca ggcgggagtg
     1321 ggctacttcg ggttcttcga atgcccggac cggcctgacg atgcccgcgc gctgctgggt
     1381 gccgtggagg agtggctggg ccagcgaggc tgccgccagt gtttcggccc gatttcggtc
     1441 acaccccgag accggatcgg catgctcacc gacggcttcg accgcccggc gatgatgttc
     1501 acgccgtaca atccggccta ctaccccgcg ctgctggagg gcgcgggcta cacctcagcg
     1561 atcggcctcc gcgcctacgg ctggagtccg gagtacgccg atccccgagg tgtcgcccgt
     1621 ctggcagcgc gagcgtcgtc cggttcaggg ttgcggatcc ggccccttcg cctcgaccgc
     1681 ctccaggagg aaaccaggct ggtcgcccga atgatcaact cgaccctcaa ggggacctgg
     1741 cacttcgacc cgatcagcga gctcgaggcc
//
LOCUS       DATIFF010001004         1584 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2125523, whole genome shotgun sequence.
ACCESSION   DATIFF010001004 DATIFF010000000
VERSION     DATIFF010001004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2125523"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..725
                     /locus_tag="VLD58_14635"
     CDS             <1..725
                     /locus_tag="VLD58_14635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55593.1"
                     /translation="FTDFGRRNQWRNGRLLPGEPWVLASYLAGGLGNLAELLHETGHA
                     IHLAGIRARPAWQEWPDNDTFTEALADLPALELYEPDWQRRFLGDSAPLPASLRARYA
                     ATIFDCAWALFEIRVHRDPAADPNILWSAIVRDYLGIRPHPEWSWWAMRGQLVDAPGY
                     LVNYALGAFIVADIRHHIVQRRGEIFAADSTLYPWLTARLYRFGAQRPARRVLEDFLG
                     RAVRPDALLEDLNRMNRSPERR"
     gene            874..1554
                     /locus_tag="VLD58_14640"
     CDS             874..1554
                     /locus_tag="VLD58_14640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55594.1"
                     /translation="MPTPLTSDDSAERAQFLKLLTWFAPTGFILLTLGETLGFAQGRY
                     GGAVYAGLLLLNLPILFLMSLLLFWLITRSASGLAWIVYSTGDLTPDPAHSAFESLVA
                     RGFYPEAADAYRAHLAACPGDHLARIKLAAICREHLGDPAGAERLYLEVRRAQPTPRL
                     EFLVGNLLIELYRAEGRHDRLVVELARFADRWKRTRAGREAARALRALKEERDRQARE
                     PTEPGGGA"
BASE COUNT          229 a          564 c          542 g          249 t
ORIGIN      
        1 ccttcaccga ctttggccga cgcaaccagt ggcgcaacgg tcgcctgctg ccgggcgagc
       61 cgtgggtcct tgcctcgtac ctggcaggcg ggctggggaa tctcgccgag ctgctgcacg
      121 aaaccgggca tgcgatccac ctcgccggca tccgggcgcg cccggcctgg caggagtggc
      181 cggacaacga caccttcacc gaggcactcg ccgaccttcc ggcgctcgag ctgtacgagc
      241 cggactggca gcgccggttc ctcggtgaca gcgcgccact ccccgcgtcg ctccgcgccc
      301 ggtacgccgc caccatcttc gattgcgcgt gggccctgtt cgagatccgg gtacaccggg
      361 atccggcggc cgatccgaac atcctgtgga gcgcgatcgt ccgggactac ctgggtatcc
      421 ggccgcaccc ggagtggtcc tggtgggcaa tgcggggcca gctggtggac gctcccggct
      481 atctggtgaa ctacgccctc ggcgccttca tcgtggcaga catccgtcac catatcgtcc
      541 agcgacgggg cgagatcttc gcggccgaca gcacgcttta tccctggctg accgcccggc
      601 tctaccgatt cggcgcccag cgcccggcgc gacgggtgct ggaggacttc ctgggccggg
      661 cagtccgtcc ggacgcgctg ctcgaggacc tgaaccggat gaaccggtcg ccggaacggc
      721 gataaccgcc ctccggccac ggcgcgcgtc acgtacctcg cgcgagtccg gggccccggt
      781 cagtcggcgg catcatggaa ggccggcgtg gtacgacata cgcggcaccg ggcacgcagc
      841 actcggagcg tggaagcgcg gaaacaccat cctatgccga ctcccctgac ttccgacgat
      901 tccgccgagc gagcccagtt cctcaagctg ctcacgtggt tcgcgcctac ggggttcatc
      961 cttctcacac tgggtgagac gctcggcttt gcgcagggcc gctatggcgg cgcggtgtat
     1021 gcgggcctgt tgttgctcaa cctccccatc ctcttcctga tgagcctgct gctgttctgg
     1081 ctcatcacac gttccgccag cgggctggcg tggatcgtct actccaccgg cgacctcacc
     1141 cctgatccgg cccactcggc attcgagtcg ctggtcgcgc gcggcttcta ccccgaggcg
     1201 gccgacgcgt accgggctca cctggcggcc tgcccgggag accatttggc gcgcatcaaa
     1261 ctggcggcca tctgccggga gcacctgggc gacccggccg gcgccgagcg tctctacctc
     1321 gaggtgcggc gagctcaacc gacacctcgg ctggagttcc tggtcgggaa cctgctgatc
     1381 gaactgtatc gcgcggaggg gcggcacgac cgcctggtgg tggagctggc gcggttcgcc
     1441 gaccgctgga agcggacccg ggccgggagg gaggccgccc gggcgctccg ggcgctcaag
     1501 gaggaacggg atcgccaggc ccgcgagccg acggagcctg gcgggggtgc ctagaaggga
     1561 ataggggcca ccggcacggg aacc
//
LOCUS       DATIFF010001005         3975 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1971772, whole genome shotgun sequence.
ACCESSION   DATIFF010001005 DATIFF010000000
VERSION     DATIFF010001005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3975)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3975)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3975
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1971772"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1052
                     /locus_tag="VLD58_14645"
     CDS             <1..1052
                     /locus_tag="VLD58_14645"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HSB55595.1"
                     /translation="LGLAAVIGVTGVIFAPDLLRLMGASPAVIATGSNYTRMMLGGNG
                     VILLLFLINAIFRGSGDAAISMRVLWLANGINIVLAPSLIFGVGPLPRLGVTGAAVGT
                     TIGRGIGVLFQLWYLSRPGRRVVVRKRHLALHPKVMLALVRLSAAGTFQVFVSTASWI
                     GLVRILSTFGSYAVAGYTIGIRVIVFALLPSWGLANAAATMVGQNLGAGKPERAERAV
                     ALAGRYNMVFLGLVGLVFFFGAGPIVRLFTADALVAPTAMNCLRIVSLGFVFYAWGMV
                     LTNSFNGAGDTWTPTLINLGCFWALEIPLAWYLAEHTSAGPTGVFWAITTAFSMVAVV
                     SAVLFRRGAWKLKKV"
     gene            complement(1150..1683)
                     /locus_tag="VLD58_14650"
     CDS             complement(1150..1683)
                     /locus_tag="VLD58_14650"
                     /inference="COORDINATES: protein motif:HMM:NF024773.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HSB55596.1"
                     /translation="MGSGSSVACDISLNTTLTPEERRRFQDPGTITRLLATSRTIAIV
                     GLSTDPQKASQFVATYLQKAGYRIIPVTPRKGVILGEPTYPDLLHLPEPVDIAVIFRP
                     GHECLAVAEQAIAAKVPAIWFQLRIQAKQAAERAAAAGLAVVLDKCIKMEHGRFAGTL
                     HWGGMNTELISARKAPV"
     gene            complement(1644..2945)
                     /locus_tag="VLD58_14655"
     CDS             complement(1644..2945)
                     /locus_tag="VLD58_14655"
                     /inference="COORDINATES: protein motif:HMM:TIGR01326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase/cysteine synthase family
                     protein"
                     /protein_id="HSB55597.1"
                     /translation="MTEPRSRRFGFDTRMLHAGHIPDAVVGARAVPIYQTTSFVFDDA
                     ETAAQLFELKQYGNIYTRIGNPTTAVLEERLASLEGATGAVATASGMAAQLITFMTLL
                     SPGDEIVASSHLYGGSMTQLTHTFKKLSLPVRFVDPTRIEAWEAAITPKTRALFGETV
                     GNPRGTILDLEPLAALAAQHRIPLIVDNTFATPYLCRPIEWGATIVVHSATKFIGGHG
                     NSIGGILAESGKFDYSHYATIADPSPSYHDLRFYETFGHYGFLMKARAETVRDTGACL
                     SPLNAFLLIQGLETLSLRMERHVTNARGVADFLRVHPAVSWVAYAGLPDHPQHALAQK
                     YLGGRPGAVFSFGLKAGESEARAKGRTFIESLQVFSHLANVGDARSLVIHPASTTHQQ
                     LSDAELAAAGVAPEMIRLSVGLETLEDLLWDLDQALRATSR"
     gene            3105..>3975
                     /locus_tag="VLD58_14660"
     CDS             3105..>3975
                     /locus_tag="VLD58_14660"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ada metal-binding domain-containing protein"
                     /protein_id="HSB55598.1"
                     /translation="MQEANQRPTANGQRPIDPEAAWTAVAERDERWDGRLVYGVTSTR
                     IFCRPSCPSRRPRRDRTRFFNSPKEAEAAGFRACRRCQPGSRAPSVAERAVARARAYL
                     DGHTGEVVSLERLSREAEMSPWHLQRTFRRLVGLSPREYAEARRTASFKKRLRQDQSV
                     SRATYEAGFGSSSRVYERSAVLLGMTPGAYRKGGAGMEIRYTVVASPYGRLLVAVTDR
                     GVAAVTLGDGDAALERGLKAQFPRAEISRVDAGADEWLGQLVRRVSARVARPNAALDG
                     ELPLDLQGTAFQWR"
BASE COUNT          588 a         1230 c         1480 g          677 t
ORIGIN      
        1 ggctgggcct ggccgcggtg atcggggtga cgggcgtgat cttcgccccc gacctgctcc
       61 gcctgatggg agcgagcccg gccgtgatcg cgaccggctc gaactacacc cgcatgatgc
      121 tgggcgggaa tggcgtgatc ctgctgctgt tcctgatcaa cgccatcttc cgcgggagcg
      181 gtgacgcggc gatctcgatg cgggtgctct ggctggccaa cgggatcaac atcgtgctgg
      241 ctccctcgct gatctttggt gtcggtccgc tgccccggct cggtgtgacg ggcgcggcgg
      301 tggggaccac catcgggcgt ggcatcggcg tcctgttcca gctctggtac ctgagccggc
      361 cggggcggcg ggtggtggtg cggaaacggc acctcgcgct ccatccgaag gtgatgctgg
      421 cgctggtgcg gctgagcgca gcggggacct tccaggtctt tgtgagcacc gcgagctgga
      481 tcggcctggt gcggatcctg tcgaccttcg gcagctacgc ggtggcgggg tacaccatcg
      541 ggatcagggt gatcgtgttc gcgctgctgc cgtcgtgggg cctcgcgaac gccgcggcca
      601 cgatggtggg ccagaacctc ggcgctggca aaccggagcg ggccgagcgg gcggtggcgc
      661 tcgccgggcg gtacaacatg gtgttcctgg gactggtggg gctggtgttc ttcttcgggg
      721 ccggcccgat cgtccggctg ttcaccgcgg atgcgctggt ggccccgacg gcgatgaact
      781 gcctgcggat cgtgagcctg ggattcgtgt tctatgcctg gggaatggtg ctcaccaact
      841 ccttcaacgg ggcgggtgac acctggacgc cgaccctcat caacctcggc tgcttctggg
      901 cgctggagat tccgctggca tggtacctgg cggagcacac cagtgccggg ccgaccggcg
      961 tcttctgggc gatcaccacc gcgttctcga tggtggcggt ggtgagtgcg gtgttgttca
     1021 ggcggggggc gtggaagttg aagaaggtct agaggtcgag ggtcggaggt caagggtcat
     1081 gggtcatggg tcatgggtca agggtgatgt actgatccct tgaccctcga cccgtgaccc
     1141 gtgacctcct cagaccggcg ccttccgtgc cgagatcagc tccgtattca tcccacccca
     1201 atgcagcgtc cccgcgaagc ggccgtgctc catcttgatg cacttgtcga gcactacggc
     1261 gagaccggcc gccgcggcgc gttcggcggc ctgcttggcc tggattcgta gctggaacca
     1321 gatcgccgga accttcgccg cgatggcctg ttccgccacc gcgaggcact cgtgccccgg
     1381 ccggaagatc actgcgatat cgaccggctc agggagatgg agcaggtcgg gataggtggg
     1441 ctcgcccagg atcacgccct tgcggggcgt gaccgggatg atccggtaac cggccttctg
     1501 gaggtaggtc gccacgaact gactcgcctt ctggggatcg gtcgagagac ccacgatggc
     1561 gatggtccgg ctggtggcga ggaggcgggt gattgtcccc ggatcctgaa agcggcggcg
     1621 ctcctccggg gtcagggtgg tgttcagcga gatgtcgcac gcaacgcttg atccagatcc
     1681 cacagcaggt cctccagggt ttcgagtccc accgagagcc ggatcatctc cggcgccacg
     1741 ccggcggccg cgagctccgc gtcgctcagc tgctggtggg tggtgctcgc agggtgaatc
     1801 accaggctcc gcgcgtcgcc gacgttggcg aggtgagaga agacctggag actttcgata
     1861 aatgtacgcc ccttggcccg ggcttcgctc tccccggcct tgagcccgaa ggagaagacc
     1921 gcgccgggcc ggccgccgag gtacttctgg gccagggcat gctggggatg gtccgggagg
     1981 ccggcgtagg ccacccagga gaccgcgggg tgaacgcgca ggaagtcggc cacaccgcgg
     2041 gcattggtca catgccgctc catccggagc gacagcgtct ccagcccctg gatcaggagg
     2101 aaggcgttca ggggcgagag acaggccccg gtgtcgcgca ccgtctcggc ccgcgccttc
     2161 atcaggaagc cgtagtggcc gaaggtctcg tagaagcgaa ggtcgtgata cgagggcgac
     2221 gggtccgcga tcgtggcgta gtggctgtag tcgaacttcc ccgattcggc gaggatgccg
     2281 ccgatgctgt tgccgtgccc cccgatgaac ttggtggccg agtggaccac gatcgtggcg
     2341 ccccactcga tcgggcggca gaggtacggg gtggcgaagg tgttgtcgac gatcagcggg
     2401 atccggtgct gggccgcgag tgccgccagc ggctcgagat cgaggatggt gccccgggga
     2461 ttgcccacgg tctcgccgaa cagcgcccgg gtcttcggcg tgatggccgc ttcccaggcc
     2521 tcgatccgcg tcgggtccac gaaccggacc ggcagcgaga gcttcttgaa ggtgtgggtc
     2581 agctgggtca tgctcccgcc gtagagatgg ctcgaggcga cgatttcatc gcccggcgaa
     2641 agcagggtca tgaacgtgat cagctgggcc gccatcccgc tggcggtggc caccgcgccc
     2701 gtggcgccct ccagcgaggc caggcgttct tccaggacgg cggtggtcgg gttaccgatc
     2761 ctggtgtaga tgttcccgta ctgcttgagc tcgaagagct gggccgcggt ctcggcgtcg
     2821 tcgaagacga acgaggtggt ctggtagatc gggacggctc gcgcgccgac caccgcgtcc
     2881 gggatgtgac cggcgtgcag catccgggtg tcgaagccga atcttcgcga acggggctcg
     2941 gtcatggggg gcgccggttg ggggaacggg tgtgtccgcc cgtaagatgg tgggggcggg
     3001 agtcgctctc caatacccgc gcaaggttcg gatagcctgt ggtgggggag gaggagtaaa
     3061 ctaaggcggc aaggaagtaa ggcggcagct ttcggaggtg tggagtgcag gaagccaacc
     3121 aacggccaac ggccaacggc caacggccaa tagatcccga ggccgcctgg accgccgtag
     3181 ccgagcgcga tgagcgctgg gacggacggc tggtgtacgg ggtcaccagt acccgcatct
     3241 tctgccgccc ctcctgtcct tcgcgccggc ctcgccggga ccgcacccgg ttcttcaatt
     3301 ccccgaagga agccgaagcc gccggcttcc gcgcgtgtcg gcgctgccag ccaggttccc
     3361 gcgcgcccag tgtggcggaa cgcgccgtgg cccgggcccg ggcgtatctc gatggacaca
     3421 cgggcgaggt cgtctcgctc gaacggcttt cgcgggaagc ggagatgagc ccctggcacc
     3481 tgcagcggac ctttcgccgg ttggtcggcc tgagtccgcg ggagtacgcc gaagccaggc
     3541 gcaccgcctc cttcaagaag cgcttgcgcc aggaccagag cgtgagccgg gccacctatg
     3601 aagcagggtt cgggtccagc agccgggtct acgagcggtc cgcggtgctg ctgggcatga
     3661 cacctggcgc ctatcgcaag ggcggagccg ggatggagat ccgctacacg gtggtggcgt
     3721 caccctatgg gcggctcctg gtcgcggtca ccgatcgcgg ggtggccgcg gtgacgctgg
     3781 gtgacggcga tgccgcgctg gaacgcgggc tcaaggccca gtttccccgc gccgagatct
     3841 cccgggtgga tgccggggcg gacgagtggc tgggccagct ggtgcggcgg gtgtcggccc
     3901 gggtggcacg ccccaatgca gcactcgacg gcgagctgcc gctcgatctg cagggcaccg
     3961 cgttccagtg gcggg
//
LOCUS       DATIFF010001006         1306 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_280591, whole genome shotgun sequence.
ACCESSION   DATIFF010001006 DATIFF010000000
VERSION     DATIFF010001006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_280591"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1044
                     /gene="nuoF"
                     /locus_tag="VLD58_14665"
     CDS             <1..1044
                     /gene="nuoF"
                     /locus_tag="VLD58_14665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HSB55599.1"
                     /translation="NADESEPGTFKDREIMRWTPHQLIEGCAIAAYAIGAETCYIYIR
                     GEFTDPLRIMTAAVAEAYAEGALGPNVLGSGKRIDVVVHRGAGAYICGEETALMNSLE
                     GKRGNPRIKPPFPAQAGVFGMPTTINNVETLAAVPHILTRGAAWYKALSLGSPKSTGT
                     KLISVCGHIARPGNYEITLGFPMKDLVFDLAGGMRPGRTLKAVIPGGSSVPIMTAAEI
                     EDCPTDYESIAAKGSMLGSGGMIVMDDSADMVYQIWRLARFYAHESCAQCTQCREGTA
                     WTTKVLERILAGKGKEEDLQLLLDLSENMTGKTICVLSDSCAAPIVSGIQKFRSEFEA
                     YISKARKPALAGV"
BASE COUNT          232 a          428 c          456 g          190 t
ORIGIN      
        1 aacgcggacg agtcggagcc gggaacgttc aaggaccgcg agatcatgcg gtggacgccc
       61 caccagctga tcgagggctg cgccatcgcc gcgtacgcca tcggtgcgga gacctgctac
      121 atctacatcc ggggcgagtt caccgacccg ctccgcatca tgacggccgc cgtggccgag
      181 gcgtacgccg agggcgcgct ggggccgaac gtcctgggga gcggcaagcg gatcgacgtg
      241 gtggtccacc ggggcgcggg ggcgtacatc tgcggcgagg agaccgcgct gatgaactcc
      301 ctcgagggca agcgcggcaa cccgcggatc aagccgccgt tcccggccca ggccggcgtg
      361 ttcggcatgc cgaccaccat caacaacgtc gagaccctgg ccgcggtccc gcatatcctc
      421 acccgcggcg ccgcctggta caaggcgctc tcgctcggca gccccaagag caccggcacc
      481 aagctgatct cggtttgcgg gcacatcgcg cggccgggca actacgagat cacgctgggc
      541 ttcccgatga aggacctggt cttcgacctc gcgggcggca tgcggcccgg ccggaccctc
      601 aaggcggtga tcccgggcgg ctcgtcggtc ccgatcatga ccgcggcgga gatcgaggac
      661 tgcccgaccg actacgagag catcgcggcc aaggggtcca tgctcggctc gggcggcatg
      721 atcgtcatgg acgactcggc cgacatggtc tatcagatct ggcggctggc ccgcttctac
      781 gcccacgagt cctgcgccca gtgcacccag tgccgggagg ggaccgcgtg gaccacgaag
      841 gtgctggagc ggatcctggc cgggaagggg aaggaggagg acctccagct gctgctcgac
      901 ctctcggaga acatgacggg caagacgatc tgcgtgctga gcgattcctg cgccgcgccg
      961 atcgtgagcg ggatccagaa gttccggtcc gagttcgagg cgtacatctc gaaggcccgg
     1021 aagccggcgc tcgcgggcgt ctgaacagcg ccgtgtgccg agcgggccgc tgcaactgca
     1081 aaccacagag gcacggaggc acaaaggtgg aatttggtgg tcgcggcgcg ggcaccgcgg
     1141 ctcgtgggaa gaccacctca aatcaaatgg ctgaggatat ggaggcttcg cggctccccg
     1201 aagccctctg tgcctccgtg cctctgtggt gaaaaccgtg tctcgctgtt gaactcagtg
     1261 cctcccggtg accgaatgac ggaactggtc agcgtcacga tcgagg
//
LOCUS       DATIFF010001007         3044 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_432359, whole genome shotgun sequence.
ACCESSION   DATIFF010001007 DATIFF010000000
VERSION     DATIFF010001007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3044
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_432359"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..597
                     /locus_tag="VLD58_14670"
     CDS             <1..597
                     /locus_tag="VLD58_14670"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF002003.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003905 - alkylbase DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HSB55600.1"
                     /translation="SSRRAATLPVSFFSRPADVVARELLGTLVVSTLGGWRTAGRIVE
                     TEAYLGRDDPASHGYRDRRHARNEALYGSPGTWYVYLSYGMHWCANLVCGPVGHASAV
                     LLRALEPIAGLEVMRERRGGVADRQLCSGPGRLCQALGVTREVDGALMRRSGVIVRAA
                     SAAPGVAATPRIGITKAAEWPLRFVVPGSPWASRRTDA"
     gene            complement(688..1362)
                     /locus_tag="VLD58_14675"
     CDS             complement(688..1362)
                     /locus_tag="VLD58_14675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55601.1"
                     /translation="MMRMVIRSIPVMALAVCLGVAQLSAQEPGNGNFQWYIGPQAGVM
                     FFKTPTQGSEAIPSFGGQTLIVAKRTGLLLSVEEAVGSDETSSYSSLAGTQSVTFNDI
                     RKYSAVLVAFPIKAAAQPYLGAGFGIIHVVNPQELGTDSPVAADLGSSGFGTFLAGLQ
                     FQVGRFMAYGQYQITTGASNDTVEDNTGAPVAFGRLLQGPTHTFTGGLRIGLGSAREP
                     VSKPGS"
     gene            complement(1591..2790)
                     /locus_tag="VLD58_14680"
     CDS             complement(1591..2790)
                     /locus_tag="VLD58_14680"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008890 - glycine C-acetyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HSB55602.1"
                     /translation="MSTLLEQRLEAELEQFVRDGVYKRLNYLDGPQGPRVVMEGRGEV
                     IILSSNNYLGLSNQREVVEAGKAALDRFGAGTASVRFICGTFTVHRALEHACARLVGT
                     AASLSFVSAWNANEAVPGTLLGENDVIISDQLNHASIIDGIRLAKAITKCRSAVYRHG
                     DLADLDARLAAERGARVRMVVTDGVFSMEGSIAPLPDLVELCRRHQAVLVVDDSHGTG
                     VLGERGRGTAEHFGLLGEVDIITSTLGKALGGAAGGFVAAGAAVCDYLTQRARPQLFS
                     NALPPTVAASALAAVEYLEAHPERVAALRENSRYFRERLLELGFNPLPGETPIIPVIL
                     GETSAAIRMSDLLLSEGVFVTGFGFPVVPQGEARVRCQISAAHTRADLDQALDAFQRV
                     GHQLKLI"
     gene            complement(2787..>3044)
                     /gene="tdh"
                     /locus_tag="VLD58_14685"
     CDS             complement(2787..>3044)
                     /gene="tdh"
                     /locus_tag="VLD58_14685"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682146.1"
                     /note="converts threonine and NAD to
                     1,2-amino-3-oxobutanoate and NADH; functions in threonine
                     catabolism; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine 3-dehydrogenase"
                     /protein_id="HSB55603.1"
                     /translation="NLLGTPSRTTEVDFARDVIFKGLTLYGVTGRKMYETWDQMRRFL
                     RAGQLDPRPVITHRFPLERIAEAIQVIKDGQAGKVILEVAR"
BASE COUNT          444 a         1021 c         1117 g          462 t
ORIGIN      
        1 tcatcccgac gggcagcgac gctgcccgtc tcgttcttct cccgtccggc cgacgtcgtt
       61 gcccgcgagc tgctcggcac gctggtggtc tccaccctgg gcggctggcg caccgccggg
      121 cggatcgtcg agaccgaggc ctatctcggc cgcgacgacc ccgcctcgca cggctaccgg
      181 gatcggcgcc atgcccggaa cgaggcgctg tacggttccc cggggacttg gtacgtgtac
      241 ctgtcctacg gcatgcactg gtgcgccaac ctggtctgtg gaccggtggg ccatgcgagc
      301 gcggttctgt tgcgcgcctt ggagccgatc gccggactgg aggtgatgcg ggagcgccgg
      361 gggggagtgg cggaccggca gctctgctcc ggcccgggcc gtctctgtca ggcgctcggt
      421 gttacccggg aggtggatgg agccctgatg cggcgctccg gggtgatcgt gcgggcggcg
      481 tccgcggcgc cgggcgtggc ggcgacgccg cgcatcggca tcaccaaggc ggcggagtgg
      541 ccgctccggt tcgtcgtgcc ggggtcgccg tgggcctcgc gccggaccga cgcctgaggg
      601 ccgcggcgcg gcaaagcgaa cgggcaggag atcgagatcc cctgcccgtt caccattccg
      661 gagcgaccgg tcggtcgccg tcgtccgtca gctgccgggc ttcgacaccg gttcccgcgc
      721 gctgccgagc ccgatccgga ggccaccggt aaaggtgtgg gtcggaccct ggagcaagcg
      781 gccgaaggcg accggggccc cggtgttgtc ctcgacggtg tcgttcgagg caccggtggt
      841 gatctggtac tggccgtagg ccatgaagcg gcccacctgg aactggagcc cggcgaggaa
      901 ggtgccgaac ccgctgctgc cgaggtccgc cgcgaccggc gagtcggtgc cgagttcctg
      961 cgggttcacc acgtggatga tcccgaagcc ggcgcccagg tagggctgcg cggcggcctt
     1021 gatcgggaac gccacgagga ccgcggaata cttccggatg tcgttgaagg tgaccgactg
     1081 ggttccggcg aggctggagt aggagctggt ctcgtcggag cccaccgcct cctcgaccga
     1141 gaggagcagc ccggtccgct tggccacgat cagggtctgg ccgccgaagc tcgggatggc
     1201 ctcgcttccc tgcgtggggg tcttgaagaa catgaccccg gcctggggac cgatgtacca
     1261 ctggaagttg ccgtttccag gctcctgggc cgacagctgg gccacgccca ggcagacggc
     1321 cagtgccatc accggaatgc ttcggatgac catgcgcatc actgactgcc tccgtaaggt
     1381 gtccgcacca ggcgggccct ggcgcctacc gcgtccccag tgagcggtac gtcaaaatgc
     1441 gggaatcttg ctggaaagcg cgggagggaa gggggaacga gggtgcagtg atctgcctgt
     1501 aggacaacag gttacagaat tctgccccgc tacttccccg cccgtcggag ggggcagggg
     1561 tgcaagaggg aggccaatgc cgggcggggg ctagatcagc ttgagctggt ggcccacccg
     1621 ctggaaggcg tcgagcgcct ggtcgaggtc cgcccgggtg tgggccgcgg agatctggca
     1681 gcggacccgg gcttcgccct ggggcaccac cggaaagccg aagccggtga cgaatacccc
     1741 ctcgctcagg agcaggtcgc tcatccgaat ggcggcggag gtctcgccca ggatgacggg
     1801 gatgatcggg gtctcgccgg ggagcggatt gaagccgagc tcgagcaggc gctcgcggaa
     1861 gtagcgggag ttctcccgca aggcggccac ccgctcgggg tgcgcctcga ggtattccac
     1921 cgcggcgagg gcgctggccg ccacggtcgg cgggagagcg ttggagaaga gctggggtcg
     1981 ggcgcgctgg gtcaggtagt cgcacaccgc cgcgcccgcg gccacgaagc cgccggcggc
     2041 gccgccgagc gccttgccca gggtggaggt gatgatgtcg acctcgccca gcaggccgaa
     2101 gtgctccgcc gtgccccgcc cccgctcgcc cagcaccccg gtgccgtgcg agtcgtccac
     2161 caccagcacc gcctggtgcc gccggcagag ctccaccagg tcgggcagcg gcgcgatcga
     2221 cccctccatc gagaagaccc cgtcggtgac gaccatccgg acccgggcgc cgcgctcggc
     2281 ggccaaccgg gcgtcgagat cggccaggtc gccgtggcgg tagaccgcgc tccggcactt
     2341 ggtgatcgcc ttggccagac ggatgccgtc gatgatggac gcgtgattca gctggtcgct
     2401 gatgatcaca tcgttctcgc ccagcagcgt tcccggcacc gcctcgttgg cgttccaggc
     2461 gctgacgaag ctcagcgagg cggccgtgcc caccagccgg gcgcaggcat gctccagcgc
     2521 gcggtgcacc gtgaaggtgc cgcagatgaa gcggaccgag gcggtgccgg cgccgaaccg
     2581 gtcgagcgcc gccttgcccg cctccaccac ctcccgctgg ttgctcagtc ccagatagtt
     2641 gttggaggag aggatgatca cctcaccccg cccctccatc acgacccggg gtccctgggg
     2701 gccgtcgagg tagttgagcc gcttgtagac cccgtcgcgg acgaactgct ccagctcggc
     2761 ctcgagccgc tgctccagga gagtgctcat cgggcgacct ccagaatgac cttgcccgcc
     2821 tgcccgtcct tgatgacctg gatcgcctcc gcgatacgct ccagggggaa gcgatgggtg
     2881 atcaccggcc ggggatcgag ctgaccggcg cggaggaagc gccgcatctg gtcccaggtc
     2941 tcgtacatct tccggccggt gaccccgtac agagtgagtc ccttgaagat gacgtcgcgg
     3001 gcgaagtcta cctcggtggt gcggctgggg gtgcccagca ggtt
//
LOCUS       DATIFF010001008         2927 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1050246, whole genome shotgun sequence.
ACCESSION   DATIFF010001008 DATIFF010000000
VERSION     DATIFF010001008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2927
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1050246"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(100..975)
                     /locus_tag="VLD58_14690"
     CDS             complement(100..975)
                     /locus_tag="VLD58_14690"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSB55604.1"
                     /translation="MAGAKRIIFSVLAAIAALVVLGVVAIALMSKRVLANRFEVTPGA
                     VTIPTDSASIARGKHLASAIAKCVDCHGEDLRGQAMEMGPMGTFPAVNLTTGKGGRVR
                     TDAEWVRAIHHGVGDGGRPLVFMPSLPYSRLSASDLGAIIAWVKSMPPVDNEVPPLKL
                     GPIGKLLIAKQPGRLVAALAIDHSAPLPADVPVGPTAEYGAYLVVVGGCTYCHGDNLA
                     GGIKEGPPGTPASANLRPDGPTAQWSEADFATALRTGKRPDGTDLNPFMPWRLTRFMT
                     DDEIKATWAYLRSLR"
     gene            complement(1003..1560)
                     /locus_tag="VLD58_14695"
     CDS             complement(1003..1560)
                     /locus_tag="VLD58_14695"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HSB55605.1"
                     /translation="MTHREPAAPDRLLTAALAEFAREGRAGARTEQIARRAGVNKQLI
                     HYYYRTKAGLYQATLEYVARSVVEQLSQLPLVGLTAVERLRRLVRGQFDFLLQHPEHT
                     AVLVRANAESEWADLAIRPVADLLREGQATGFFRDDVDPVAHARLALLVTIGYFALRP
                     LTDKWGDAPVWRDRTAELIVRGCSW"
     gene            complement(1564..>2927)
                     /locus_tag="VLD58_14700"
     CDS             complement(1564..>2927)
                     /locus_tag="VLD58_14700"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HSB55606.1"
                     /translation="LEALVDRLAEAFDGAARELGLPARGPAVTEFGWRALVLGPDNQL
                     RQDVCTALMNSGFVIRAETGEGEPRELKISERPDLVVVLEEPSGTDPYATATAWSGAG
                     PVRPRSIVLVARSETTDRVRALASGIDSVLPAERVPVDLPVYAKTLARIGSPPPRVLL
                     VDNDQAQAETIIQWLEQANARVTHCVDGNAARDAMVRETPDLILMDTRLPGIDGLSLA
                     RLVRQDSRFGLTPIVFVTHHDSVADQIEALSAGADHFLTEPVDRELLTHLVVTRAERG
                     RRLREMVHRDGLTGLLNHATLMAELEHAVEFARRHGESFAFMMIDVDHFKRVNDRYGH
                     LAGDQVLLHVARVFQTTARASDMIGRYGGEEFGMILRRTDRTGAGILANKLRTALNEQ
                     PAVVGAGEQIPVKVCIGIAAYPEDATTASDLALLADGALYRAKAGGRDRVEFTREMRA
                     RTA"
BASE COUNT          440 a          998 c         1035 g          454 t
ORIGIN      
        1 ggcggcaagg cgggcagtag aacacgaagg gtgggctccc agaaagagcc cacccttcac
       61 gttcttgctg accgctttgc cgccttgccg cttggccgcc tacctcaggc tcctcaaata
      121 cgcccacgtc gccttgatct catcgtccgt catgaaccgg gtgagccgcc agggcatgaa
      181 cgggttgagg tcggtgccat cgggccgctt gccggtgcgg agcgcggtgg cgaaatccgc
      241 ctcgctccac tgtgcggtcg gaccgtcggg ccgcaggttg gccgacgccg gcgtcccggg
      301 cggaccctcc ttgatgccgc cggccagatt gtccccatgg cagtaggtgc agcctcccac
      361 caccaccagg tacgcgccgt attccgccgt gggccccacc ggaacgtccg cggggagcgg
      421 ggcggaatga tcgattgcga gcgcggccac caggcggccc ggctgcttcg cgatcaggag
      481 ttttccgatc gggccgagct tgagcggcgg aacctcgttg tcgaccggcg gcatggactt
      541 cacccaggcg atgatggcgc cgagatccga ggcgctaagg cgggagtagg gcagcgacgg
      601 catgaacacg agaggccggc caccgtcccc gacgccatgg tgaatcgccc ggacccactc
      661 cgcgtcggtg cgaacccgcc cgcccttgcc ggtggtgaga ttgacggcgg ggaaggtgcc
      721 catcggtccc atctccatcg cctggccgcg caggtcctct ccgtgacagt cgacgcactt
      781 ggcgatcgcc gacgccagat gtttgccgcg ggcgatcgag gccgagtccg tcgggatggt
      841 gacggcgccg ggggtgacct cgaaccggtt ggccaggacc cgcttgctca tgagggcaat
      901 cgcgacgacg cccagaacaa cgagggcggc gatcgcggcg agcacgctga agatgattcg
      961 cttggctcct gccatgcact ctccttgccg aggtggtgcc gtctaccagc tgcagccgcg
     1021 gacgatgagc tccgcggtgc ggtcgcgcca gaccggcgcg tcgccccatt tgtcggtgag
     1081 tgggcggagg gcgaaatatc cgattgtcac cagaagcgca agacgggcgt gggccaccgg
     1141 gtccacatcg tcgcgaaaga agccggtggc ctggccttcg cgcagcaggt ccgccaccgg
     1201 ccggatcgcg aggtcggccc attcgctctc ggcgttggcg cgcaccagga ccgcagtatg
     1261 ctcgggatgc tggagcagga agtcgaactg gccccgcacc agccggcgga gccgctcgac
     1321 cgcggtgagt ccgaccagcg ggagctggct cagctgctcg accacgctcc gcgccacata
     1381 ctcgagcgtg gcctggtaaa ggccggcctt ggtgcggtag tagtagtgaa tgagctgctt
     1441 gttgaccccg gcgcggcggg cgatctgctc ggtgcgggcg ccggcccggc cttcgcgggc
     1501 gaactccgcg agcgccgccg tcagcagccg gtcaggagcc gccggctcgc gatgcgtcac
     1561 tgctcatgcg gttctcgccc gcatctcccg ggtgaactcc acccggtcgc gcccgcccgc
     1621 cttggcgcgg tagagcgcgc catcggcgag gagcgccagg tcgctcgcgg tggtggcgtc
     1681 ctctggatag gcggcgatac cgatgcagac cttcaccggg atctgctcgc ccgcgccgac
     1741 caccgccggc tgctcgttga gggcggtgcg gagcttgttg gcgaggatcc cggcgccggt
     1801 ccggtcggtg cggcggagaa tcatgccgaa ctcctcgccg ccgtagcgtc cgatcatgtc
     1861 gctggcacgg gccgtggtct ggaacacccg ggcgacatgc agcaggacct ggtcacccgc
     1921 gaggtggccg tagcggtcat tcacccgctt gaagtggtcc acgtcgatca tcatgaacgc
     1981 gaatgactcg ccgtgccgcc gggcgaactc gaccgcatgt tccagctcgg ccatgagcgt
     2041 ggcgtgattg aggagcccgg taaggccgtc gcggtgcacc atctcccgga gccggcggcc
     2101 ccgctcggcg cgggtcacca ccaggtgggt gagcagctcc cggtcgaccg gttcggtcag
     2161 gaagtgatcc gcgccggcgg agagcgcttc gatctggtcg gccacgctgt cgtggtgggt
     2221 gacgaacacg atcggggtga gcccgaagcg ggagtcctgc cgcaccagcc gcgcgagcga
     2281 gagtccatcg attcccggga gccgggtgtc catcaggatc aggtcgggtg tctcccggac
     2341 catcgcgtcc cgcgccgcgt tgccatcgac acagtgggtg acccgggcat tggcctgttc
     2401 cagccactgg atgatggttt ccgcctgggc ctgatcgttg tcgaccagca ggacccgggg
     2461 cggcgggctg ccgatccggg cgagggtctt ggcatagacc ggcaggtcca cgggtacccg
     2521 ttcggccggg agcacggaat cgatacccga ggccagtgcc cgcacccggt cggttgtctc
     2581 cgagcgggcg accagcacga tcgagcgggg acgcaccgga cccgcacccg accacgccgt
     2641 cgcggtggca tagggatcgg tgcctgacgg ctcttccagc acgacgacca ggtcgggtcg
     2701 ctcgctgatc ttgagctcgc gcggttcgcc ctcgccggtt tcggcccgga tcacaaaccc
     2761 cgaattcatg agcgcggtgc atacgtcctg gcggagctga ttgtcggggc ccagcaccag
     2821 ggcgcgccag ccgaattcgg tcaccgccgg cccgcgggcc ggaagaccca gctcccgggc
     2881 cgcgccatca aaggcctcgg ccagccggtc taccagcgcc tcgaggc
//
LOCUS       DATIFF010001009         1797 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1050344, whole genome shotgun sequence.
ACCESSION   DATIFF010001009 DATIFF010000000
VERSION     DATIFF010001009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1797
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1050344"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..233)
                     /locus_tag="VLD58_14705"
     CDS             complement(<1..233)
                     /locus_tag="VLD58_14705"
                     /inference="COORDINATES: protein motif:HMM:NF013813.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55607.1"
                     /translation="MKGTIFYKMTGSGNDFVMLDGRSTTPEEWSRERIVRVCDRRAGI
                     GADGLVILSPDDGDAVRMAFFNSDGSRAAMCGNA"
     gene            complement(230..949)
                     /locus_tag="VLD58_14710"
     CDS             complement(230..949)
                     /locus_tag="VLD58_14710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenol monophosphomannose synthase"
                     /protein_id="HSB55608.1"
                     /translation="MTERVLVVVPTYNERVNVPLIVPAILGQDPRIDVLVVDDSSPDG
                     TGELADQLAAENPRVHVLHRSQKEGLGKAYIAGFRWALDHGYDLIFEMDADFSHDPRF
                     LPTFLDAIQDADLVIGSRYKTGVNVINWPISRLLLSLGANQYARLVTGLPLADSTGGF
                     KCFRRRVLEAIPLERVRSNGYAFQIEMSYLAWRKGFRLKEIPIVFTDRVEGQSKMNRK
                     IVREAVWMVWWLRLRSLGRAP"
     gene            complement(942..>1797)
                     /locus_tag="VLD58_14715"
     CDS             complement(942..>1797)
                     /locus_tag="VLD58_14715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55609.1"
                     /translation="QYSPPAAELFRDDAIATRLKQEKPPFRVLDVGVYPGSQLMAHDI
                     EQVLGYHGNELRFYDELLGGKNVWKNVGNPAVLDLTAADFIITPAEQQELPGYHKVVG
                     PVPTAPGGPGVLYQRDSTVPYARVLPAAIKVAEAQIIPALVDPRFPSDRVLVYPDTAG
                     VAVEPIRAGQAPAPSGVTARVAEWEPGRMRITLTGSEPRQSYLLVSENWYPAWHAVVD
                     GKAVPVHRGDYSFLSVPLPPGAKEVRLDFASAEYMRGKLVSWAALLVTAVLLAGAALR
                     GRFGRAGD"
BASE COUNT          289 a          634 c          606 g          268 t
ORIGIN      
        1 gcgttgccgc acatggcggc gcgggagccg tcggagttga agaacgccat gcggaccgcg
       61 tcgccatcgt cgggcgagag gatgaccagg ccgtcggcgc cgatgccggc ccgccggtcg
      121 cacacccgga cgatgcgctc ccgcgaccac tcctccggcg tagtgctccg gccgtcgagc
      181 atcacgaaat cgttcccgga gccggtcatc ttgtagaaga tggtcccctt cacggcgctc
      241 tccccagcga ccggagccgc agccaccaca ccatccacac cgcctcccgc acgatcttcc
      301 ggttcatctt gctctggcct tccacccggt cggtaaacac gatcgggatc tccttgagcc
      361 ggaacccctt cctccaggcc aggtagctca tctcgatctg gaaggcgtat ccgttggagc
      421 ggacccgctc cagcgggatc gcctccagga cccgccggcg aaagcacttg aagccaccgg
      481 tcgagtcggc gagcgggagc ccggtgacga gccgcgcgta ctggttcgcg ccgagcgaga
      541 gcagcagccg cgagatgggc cagttgatga cgttgacccc ggtcttgtag cgggagccga
      601 tcacgaggtc ggcgtcctgg atggcgtcga gaaaagtggg caggaaccgc ggatcgtggg
      661 agaagtcggc gtccatctcg aagatgagat cgtagccgtg gtccagcgcc cagcggaacc
      721 ccgcgatgta cgccttgccc aggccctcct tctggctccg gtgcagcacg tggacccggg
      781 gattctcggc cgcgagctga tcggccagct caccggtccc gtcgggcgag ctgtcgtcca
      841 ccaccagcac gtcgatgcgc ggatcctggc cgaggatcgc cggcacgatg agcggaacgt
      901 tgacccgctc gttgtaggtg ggcaccacca ccagcacacg ctcagtcacc cgccctcccg
      961 aagcgtcccc gcagcgccgc cccggcgagg agcacggccg tcaccagaag cgcggcccaa
     1021 ctgacgagct tgccccgcat gtactcggcg gacgcgaagt cgagccgtac ctcctttgcc
     1081 cccggcggca gcgggacgct caggaagctg taatcgccgc ggtgaacggg caccgccttg
     1141 ccgtcgacca ccgcgtgcca agcgggatac cagttctcgc tgactagaag ataggattgc
     1201 cggggctccg agccggtgag cgtgatccgc atccggcccg gctcccattc cgccacgcgg
     1261 gccgtgacgc cggacggggc cggcgcctgt cccgcgcgga tcggctccac cgcgacgccc
     1321 gccgtatccg gatacaccag gacccggtcg gaggggaacc gcggatcgac cagcgcgggg
     1381 atgatctggg cctcggcgac tttgatcgcc gcggggagca cccgcgcgta ggggacggtc
     1441 gagtcgcgct ggtagagcac gccgggcccg ccgggagccg tcggcaccgg ccccacgacc
     1501 ttgtggtagc cgggcagctc ctgctgctcg gcgggcgtga tgatgaagtc cgccgccgtc
     1561 aggtccagca ccgcggggtt gcccacgttc ttccagacgt tcttgccgcc cagcaactcg
     1621 tcgtagaacc ggagctcgtt cccgtgatag ccgagcacct gctcgatgtc gtgcgccatg
     1681 agctgcgagc cggggtagac ccccacgtcg agcacccgga agggtggctt ctcctgcttc
     1741 agccgggtgg cgatggcgtc gtcgcggaac agctcggcgg caggcggaga gtactgg
//
LOCUS       DATIFF010001010         1544 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2280269, whole genome shotgun sequence.
ACCESSION   DATIFF010001010 DATIFF010000000
VERSION     DATIFF010001010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1544
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2280269"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(209..337)
                     /locus_tag="VLD58_14720"
     CDS             complement(209..337)
                     /locus_tag="VLD58_14720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55610.1"
                     /translation="MRWIRKKYKRLRPFPKALACWQRIIRQYPRLFVHWTRVRTAW"
     gene            461..>1544
                     /locus_tag="VLD58_14725"
     CDS             461..>1544
                     /locus_tag="VLD58_14725"
                     /inference="COORDINATES: protein motif:HMM:NF033539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1380 family transposase"
                     /protein_id="HSB55611.1"
                     /translation="MRLLHTAATTHASFDDPNLVSHAGLIPAVRLAQNIGLEELARQH
                     VRVTAKVGASPGLKIGALVAGMVAGADTIDGMDLLRHGAFPATVGGIRAPSTLGSFLR
                     AFDHGNVRQLVAVHRRVLVELATQAPLLPGADTVAFIDVDSVQRRVYGGTKQGAAFGH
                     AKIASKSLLVRGLNILAATVSTPLAAPVVAAARLRGGNAGSARGAASLVAEAITTARL
                     AGATGLLVVRADSAYYAGAFVAACRRNGARFSVTVRMDPKVKRAIAAIPEDAWTAIKY
                     PNAIYDEQTGEWISDAQIAKVPYTAFASNRAHRTDGELIVRRVRRLNPKGTPQGQGEL
                     FATYRYHAVFTDSPFQLVQAESDHRGH"
BASE COUNT          235 a          547 c          533 g          229 t
ORIGIN      
        1 cagttgctgc gccgccgagc acgctgctga cgctgtacca gcacggcagg ctgtctccga
       61 tgcccggcga accgtgctca ggcggcgggt gcggctgcta gtcgcaatgc cccgtcgtta
      121 aggtcgggta gcccggggga atcgcacccc caggccccca cagatccgta cgtgacagtc
      181 tcccgtcata cggctcttgt catcctggtt accaggcggt gcggaccctt gtccagtgga
      241 cgaagagcct ggggtattgg cggatgatgc gctgccagca cgccagggcc ttggggaagg
      301 gtcgcagccg cttgtatttc ttgcggatcc agcgcatcag cctggatcca ccgcccggat
      361 tgtgctcgga agcgtgtcgc aacagcagaa gcgccctctg acctgggaga atgcgggtta
      421 gcgaagctcg caatgccagg atcgaaaggg cacctctggg atgcgattgt tgcacaccgc
      481 ggccacgacc cacgccagtt tcgatgatcc gaatctggtg tcgcacgccg ggctgatacc
      541 cgcggtacgg ctggcccaga acatcggcct ggaggagctg gcccgccagc acgtgcgggt
      601 gaccgccaag gtcggcgcca gccccgggtt gaagatcggt gcgctggtgg ccgggatggt
      661 cgccggcgcg gacaccatcg acgggatgga cctgctgcgg cacggcgcgt tcccggccac
      721 ggtcggcggg atccgcgccc catccacgct gggcagcttc ctgcgggcgt tcgaccacgg
      781 caacgtgcgc caactcgtcg cggtgcaccg ccgggtcctg gtcgagctgg ccacgcaggc
      841 cccgctgctg cccggcgccg acacggtggc gttcatcgat gtcgactcgg tgcagcggcg
      901 ggtgtacggg ggcaccaaac agggcgccgc gttcggccac gccaagatcg cctcgaagtc
      961 gctgctggtg cgcgggctga acatcctggc cgccaccgtg tcaacgccac tggccgcgcc
     1021 ggtcgtggcc gcggcccggc tacgcggcgg taacgccggc tccgcccggg gtgcggcctc
     1081 cctggtcgcc gaggcgatca ccaccgcccg gctggccggg gccaccggcc tgctcgtggt
     1141 gcgcgcggac tccgcgtact acgcgggggc gttcgtcgcc gcgtgccgcc gcaacggggc
     1201 ccggttctcg gtcaccgtgc ggatggaccc gaaggtcaaa cgggccatcg ccgccatccc
     1261 cgaggacgcc tggaccgcga tcaagtaccc gaacgcgatc tacgacgagc agaccggtga
     1321 gtggatctcc gacgcccaga tcgccaaggt gccctacacc gcgttcgcgt ccaaccgggc
     1381 ccaccgcacc gacggcgagc tgatcgtgcg acgggtccgc cggctcaacc cgaagggcac
     1441 cccgcagggg cagggtgagc tgttcgccac ctaccggtac cacgcggtgt tcaccgacag
     1501 ccccttccag ctggtacagg ccgagtccga ccaccgcggc cacg
//
LOCUS       DATIFF010001011         1906 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1818118, whole genome shotgun sequence.
ACCESSION   DATIFF010001011 DATIFF010000000
VERSION     DATIFF010001011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1906
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1818118"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(32..568)
                     /gene="pyrR"
                     /locus_tag="VLD58_14730"
     CDS             complement(32..568)
                     /gene="pyrR"
                     /locus_tag="VLD58_14730"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HSB55612.1"
                     /translation="MPSRSTLLDDRAIARALTRMASELVERCHGTDDLVLVGIQRRGV
                     ELAQRLAQLIEAQEGRAIPCGKLDITLYRDDLQAIGPRPVIGETSLPADLDGRTLVIV
                     DDVLYTGRTIRAALDELADFGRPRRILLCVLVDRGGRELPIQPDVVGLRQPTGPGERV
                     DVLVKELDGRDAVELARS"
     gene            complement(705..1364)
                     /locus_tag="VLD58_14735"
     CDS             complement(705..1364)
                     /locus_tag="VLD58_14735"
                     /inference="COORDINATES: protein motif:HMM:NF013918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase
                     heme-binding subunit MsrQ"
                     /protein_id="HSB55613.1"
                     /translation="MTRLAFTTRVLKPLAFVAALIPLARLVAETFGFGYLGADPVHTV
                     QVVTGLSTLVLLLLTLAVTPLRKLLGWSELIRLRRMLGLFAFFYLVLHALIYFVLDQS
                     LDPGLIWADTVEHPRIAVGFAAFLLLIPLAVTSTDRMIRRLGRRWGKLHRLVYAATTL
                     GVLHYLMVQKLDIREGLVYGAIFGGLMVFRLQGWVGRIRTAVSGRPSGAAVARPSEDL
                     P"
     gene            complement(1386..>1906)
                     /gene="msrP"
                     /locus_tag="VLD58_14740"
     CDS             complement(1386..>1906)
                     /gene="msrP"
                     /locus_tag="VLD58_14740"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016667 - oxidoreductase activity, acting
                     on a sulfur group of donors [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HSB55614.1"
                     /translation="IPWLGFPLKDLIARVGPTSRARFVEFTTLHDPAQMPGQRSRILP
                     WPYVEGLRLDEAMNPLAILVTGLYGKTLPNQDGAPLRLVVPWKYGFKGGKSIVRIQFT
                     ESRPKTTWNLLAPDEYGFYANVNPEVDHPRWSQARERRVGELFRRKTLPFNGYADQVA
                     SLYAGMDLRNNY"
BASE COUNT          333 a          632 c          685 g          256 t
ORIGIN      
        1 gggacgcccg agcagatgag cgcggacagt ctcatgagcg ggccagctcg acggcgtcgc
       61 ggccgtcgag ctccttgacc agcacgtcga cccgctcgcc cggaccggtc ggctggcgca
      121 gcccgaccac gtcgggctga atcggcagct cgcggccgcc gcggtccacc agcacgcaga
      181 gcaggatccg gcgcgggcgg ccgaaatcgg ccagctcatc cagtgccgcc cggatggtcc
      241 gcccggtata gagcacgtcg tccacgatca cgagcgtgcg gccgtcgagg tcggccggga
      301 gcgaggtctc gccgatcacc gggcgcgggc cgatggcctg cagatcatcc cggtagaggg
      361 tgatgtccag cttgccgcac gggatggctc ggccctcctg cgcctcgatc agctgcgcca
      421 ggcgctgagc cagctcgacc ccacgacgct ggatccccac cagcaccaga tcgtcggtgc
      481 cgtggcagcg ttccacgagt tcggaagcca tgcgggtgag ggcccgggcg attgcccggt
      541 cgtccaggag ggtcgaacgg gagggcatgg tggcggggaa gctagcggga tgccggaccc
      601 gggggaatgg ccccgcctcg gggccgccgg cttcccggcg ccgcacctgc gacccctgcc
      661 cgagcggagc ggtcgccgcc tccgctgccc ggcagaatcg cgcgctaggg aaggtcttcc
      721 gagggccgcg cgaccgccgc gccggagggc cggccggaaa ccgcggtccg gatgcgtccg
      781 acccagcctt gcagccggaa gaccatcaga ccgccgaaga tcgccccgta gaccagtccc
      841 tcccggatgt cgagcttctg caccatgagg tagtgcagca ccccgagggt ggtagcggcg
      901 tacaccagtc gatggagctt gccccagcgg cggccgagcc ggcggatcat ccggtcagta
      961 gacgttacgg cgagggggat cagcaggaga aatgccgcga agccgaccgc gatacgcggg
     1021 tgctccaccg tgtcggccca gatgagaccg ggatcgagcg actgatcgag cacgaaatag
     1081 atcagcgcgt gcagaaccag gtagaagaag gcgaacagcc ccagcatccg gcggagccgg
     1141 atcagctcgc tccagccgag cagcttgcgg agcggggtaa ccgccagggt gaggagcagg
     1201 agcaccaggg tagagaggcc ggtgaccacc tgcacggtgt gcaccgggtc cgcaccgagg
     1261 tatccgaacc cgaacgtctc ggccaccaga cgggccagcg ggatcagggc cgcgacgaag
     1321 gcgagcggct tgagaacgcg agtggtgaag gcgagccggg tcatggggat caggaccggc
     1381 ggccgtcagt agttattcct caggtccatc cccgcgtaca gcgaggcaac ctgatcggca
     1441 tagccgttga acggcagggt cttcctgcgg aacagctcgc ccacccgccg ctcgcgagcc
     1501 tggctccagc gcgggtgatc cacctcggga ttcacgttgg cgtagaaacc gtattcatcg
     1561 ggcgccagca ggttccaggt ggtcttcggc cgggactcgg tgaactggat ccgcacgatc
     1621 gacttgcccc ccttgaaccc gtacttccac gggaccacaa ggcggagcgg cgcgccgtcc
     1681 tggttgggca gcgtcttgcc gtagagcccg gtcaccagga tcgcaagcgg gttcatggcc
     1741 tcgtcgagcc gcagcccttc gacgtagggc caggggagaa tccggctccg ttgacccggc
     1801 atctgggcgg ggtcgtgcag cgtggtaaac tcgacgaacc gcgcgcggct ggtggggccg
     1861 acgcgtgcta tcagatcctt gagcgggaat ccgagccatg ggatga
//
LOCUS       DATIFF010001012         1080 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_742043, whole genome shotgun sequence.
ACCESSION   DATIFF010001012 DATIFF010000000
VERSION     DATIFF010001012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_742043"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..194
                     /locus_tag="VLD58_14745"
     CDS             <1..194
                     /locus_tag="VLD58_14745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55615.1"
                     /translation="PYAAKAGVAIGSALLIVIYLSLGGRGGHGAAEITATSRKKMQGS
                     IADYPDRSVKRALLDLKQA"
     gene            661..>1080
                     /locus_tag="VLD58_14750"
     CDS             661..>1080
                     /locus_tag="VLD58_14750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55616.1"
                     /translation="MVVRLLGGLAITVLTLYCSPRVRTGKGRGREGSGLYPELAAYRI
                     SEGASPNVQAEVGRLVALLPIEHARAELSGRGLELDEKAVGRIAHELGAQMLATRTRD
                     LMRFRRGELPAGSEFAGQRVAVAMDGGRVRVRTVVETI"
BASE COUNT          191 a          345 c          387 g          157 t
ORIGIN      
        1 ttccctacgc ggcgaaagcc ggcgtggcca tcggctcggc gctactcatc gtgatttacc
       61 tgtcgctggg cggccgcggt ggacacggcg ctgctgagat caccgcaacc tcgcgcaaga
      121 aaatgcaggg gtcgatcgca gactacccgg ataggtctgt gaagagggcc ctactagacc
      181 tgaaacaagc gtaatatgag ccgggcctga tcccaaaaag gggcgacgga gtgtgcagag
      241 tcggctaaca tcatcggtgg aatcggggag gaacaacagg aatcgaggtc gcccgcggag
      301 aggggctgcg atggaagtgc atctggatcg ggatgagcct cctatgggtc ggaacaagtc
      361 gaagcaaaag cggcgccggc cgcagggtcg tcaggcttgc tcgccggccg aggtcgctca
      421 ccagacgggg cggctgttgg ccgaccgtga gcccgagtgg ctcgcacgcc tgaccactga
      481 tccggccagc ttcgccgccg tggagcgcga agtccatgag caggcccggc ggcaggccga
      541 cctgtatgtc gccgggctct tggccaaggc cagcgaaagt cctacgatga ctcaacacgc
      601 cgaccgggtg cgggccgcgg ccgaggtccc gctccgcccc cccggggaaa aaaacgtccc
      661 ttggtggtcc gccttctggg gggcctggcg atcacggtcc tgacgctcta ctgctcgccc
      721 cgcgtgcgta ccggcaaggg gcgaggccgc gagggcagcg ggctctaccc ggagttggcg
      781 gcttaccgca tcagcgaagg agccagcccc aacgtgcagg ccgaggtcgg ccgcctggtc
      841 gccctcttac cgatcgaaca tgcgcgcgcc gagttgagcg gtcgtggcct ggagctggac
      901 gagaaggccg tcgggcggat cgcccacgag ctgggcgcac agatgctggc cacccgcacc
      961 cgcgacctga tgcgcttccg ccgtggcgaa ctccccgccg gcagcgagtt cgcgggccag
     1021 agggtcgccg tcgccatgga cggcggtcgg gtccgtgtgc gaaccgtggt ggagacgatc
//
LOCUS       DATIFF010001013         1134 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1973684, whole genome shotgun sequence.
ACCESSION   DATIFF010001013 DATIFF010000000
VERSION     DATIFF010001013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1973684"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            112..918
                     /gene="istB"
                     /locus_tag="VLD58_14755"
     CDS             112..918
                     /gene="istB"
                     /locus_tag="VLD58_14755"
                     /inference="COORDINATES: protein motif:HMM:NF013828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HSB55617.1"
                     /translation="MTSPASVPTPIPPTPLPTPTLPEALRSLGLRRTAADYADFIARA
                     TRSRWSPTVLLEELVRAETQERARRSLERRLSRARLGSFKPMADFEWDWPQAIDRAAV
                     ERVFDLGFLTSGSNVILVASQGLGKTMIAKNVAHQAVLRGAQVLYVTAADLLLDLGGQ
                     ETSRMLERRLRHYVEPRLLCVDEVGYLTYDNRAADLLFQVVSRRYERRSILLTTNLAF
                     KRWDTVFPNATCATALIDRLIHHVEIISITGESYRRREAEMAQKARQGKA"
BASE COUNT          168 a          405 c          387 g          174 t
ORIGIN      
        1 tggagcagcg ccggcgcgcc cgggggcaaa agccgccggt gccggtgacg ctgcccgatg
       61 atccccgcgt ccgggacttg gacgtcaccc cgcatcttct ggagcgctac gatgacctca
      121 cccgcatcgg tcccaacgcc catacccccg accccgctcc cgacgccgac cctgcctgag
      181 gcgctgcgga gcctcgggct ccgccgcacg gccgcggact atgccgactt catcgcccgc
      241 gcgacgcgca gccgctggag cccgaccgtg ctcttggaag agttggtccg ggccgagacc
      301 caagagcgcg cccggcggag cctggagcgg cgcttgagcc gggcccggct cggcagcttc
      361 aagccgatgg ccgacttcga gtgggactgg ccgcaggcga tcgaccgggc ggcggtggaa
      421 cgcgtcttcg acctcgggtt cctcaccagc ggcagcaacg tgatcctggt cgcctcgcag
      481 gggctgggca agacgatgat cgcgaagaac gtcgcccacc aggcggtgct gcggggcgcc
      541 caggtgctct acgtcaccgc ggcggatctg ctcttggacc tcggcggaca ggagaccagc
      601 cggatgctgg agcggcggct ccgccactat gtcgagccgc gcctcctgtg cgtcgatgaa
      661 gtcgggtacc tgacctacga caaccgcgcg gccgatcttc tcttccaggt ggtgagccgc
      721 cgatatgaac gccgctcgat cctcctgacc acgaatctcg cgttcaagcg ctgggatacg
      781 gtgttcccca acgcgacctg cgccaccgcc ctgatcgacc ggctcatcca ccacgtcgag
      841 atcatctcga ttacgggcga gagctaccgg cgccgcgagg ccgagatggc ccagaaggcg
      901 cggcagggga aggcgtgatc gcctcaggac gatccgatca tgttcgtgcc ggctccctgt
      961 tcagaaaagt acgttttgtg gtgatcggca acaccggccc gagcgcgcgg cggtggccga
     1021 cgtgcggcag gtcccctggg ggccgcgccg cttcccgacg gccctcgggg ggctgttcct
     1081 cttcctgccc tggctggtcc ggctggatct ggcgggcctg gtggcccagg ccga
//
LOCUS       DATIFF010001014         2884 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1512886, whole genome shotgun sequence.
ACCESSION   DATIFF010001014 DATIFF010000000
VERSION     DATIFF010001014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2884
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1512886"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..943)
                     /locus_tag="VLD58_14760"
     CDS             complement(<1..943)
                     /locus_tag="VLD58_14760"
                     /inference="COORDINATES: protein motif:HMM:NF014598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA family protein"
                     /protein_id="HSB55618.1"
                     /translation="MMKTILWVLIGAVGAAGWGVLALNRGETVSAAWLVLAAVGTYLV
                     AYRFYSRLLADRVFGLNNRRATPAERFNNGRDFVPTTKWVLFGHHFAAISGAGPLIGP
                     VLAAQFGYLPGTIWIVFGVVLAGAVQDFIILVGSMRRDGKSLGQMAKEEIGPFTGIAA
                     MVAILAIMIILLAVLSLVVVNALRDSPWGLFTIMCTIPIAVLMGFWMKVWRPGRTLEA
                     SLAGVVLLVFALVGGQQVAASPTLAPMFTWSAIPIALAMIGYGFVASVLPVWMLLCPR
                     DYLSTFMKIGTIILLAVTILLVLPELKLPAVTRFIDGT"
     gene            1027..1902
                     /locus_tag="VLD58_14765"
     CDS             1027..1902
                     /locus_tag="VLD58_14765"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSB55619.1"
                     /translation="MPPYPGDFGESFGRSGAWEPELESTGTTLEQAQPQPVPTGVAGK
                     VAVVTGGATGLGRCIAMEFARMRCKVAFCFVELPGRDVTEQALLTETACTAMGAEVYA
                     ARCDVRDRGQVERFLSDVTHRFGTVHYLVNNAGIAMDGALWRLSDEAWREVIDTNVTG
                     AFNCIRGVSPTFRKQHFGKIVSVSAHQAGRPGFGVSNYAASKAALEGLTRAAAVELGP
                     ANVNVNAVAPGFIRTERLMMLPREVIERAQKHSVLGRVAEPEDVAHVITFLCSDEARH
                     ITGQTIVVDGGLSLE"
     gene            1954..2613
                     /locus_tag="VLD58_14770"
     CDS             1954..2613
                     /locus_tag="VLD58_14770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55620.1"
                     /translation="MLNRPVAALLALLTLACGGKSAKPAPEPATPAREPVRPLITTPF
                     AGQIIAVTPLTLVVGEEPITSQPPLTDRVRTLFWADSLLAAAATGRSPEVKWVLPAEL
                     RKMARRAPTVAPDPDRMGQSLLRGSKIDEVPDPLRSNLRSLMAIAGGRYVLVPAALAF
                     VNEPAGAPLPVRAELSLALVDTRTGKVVWRSVAWATGATPERALVAALNFVFPVGLGL
                     R"
     gene            2610..>2884
                     /locus_tag="VLD58_14775"
     CDS             2610..>2884
                     /locus_tag="VLD58_14775"
                     /inference="COORDINATES: protein motif:HMM:NF012407.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HSB55621.1"
                     /translation="MTYNVTLIPGDGIGPEITAETVKVLEATGLKFEWDEQLAGVAAV
                     DATGTPLPDATIESIRHRKLALKGPLTTPVGTGFRSVNVQLRKEFEL"
BASE COUNT          476 a          979 c         1005 g          424 t
ORIGIN      
        1 cggtcccgtc gatgaaccgg gtgaccgcgg gcagcttcag ctccgggagt accagcagga
       61 tcgtcaccgc gagcaggatg atggtcccga tcttcatgaa cgtggagagg taatcgcggg
      121 gacagaggag catccacacc ggcagcacgc tggccacgaa accgtagccg atcatcgcga
      181 gggcgatcgg gatcgcggac caggtgaaca tcggcgccag tgtgggtgac gcggccacct
      241 gctggccgcc gaccagcgca aagaccagga gcaccacgcc ggcgagcgag gcctccagcg
      301 tccggccggg gcgccagact ttcatccaga atcccatcag gaccgcgatg gggatggtgc
      361 acatgatggt gaagagcccc cacgggctgt cccgcagtgc gttcaccacc accagcgaca
      421 ggaccgcgag caggatgatc atgatcgcga ggatcgcgac catcgcggcg atgccggtga
      481 aggggccgat ctcttccttg gccatctggc ccagcgactt gccgtcgcgc cgcatggaac
      541 cgaccaggat gatgaagtcc tgcaccgcgc cggcgaggac cacgccgaag acgatccaga
      601 tcgtccccgg gagatagccg aactgggcgg ccagcaccgg tccgatgagc gggcccgcac
      661 cggagatggc ggcgaagtga tggccgaaga gcacccactt cgtggtgggg acaaagtcgc
      721 gcccgttgtt gaagcgctcg gccggggtgg ctcgccggtt gttgagtccg aagacccggt
      781 cggcgaggag gcggctgtag aagcggtagg ccacgaggta ggtgccgacc gcggccagca
      841 ccagccaggc ggcgctgacg gtttcccctc gattgagcgc gaggacaccc cagcccgccg
      901 cgccgacggc accgatcagg acccagagaa tcgtcttcat catggttgga gattatgcca
      961 gaaccgggag caaggggaaa ggccggtctt ccgcacaccg tcgtgacggc gtaccttggc
     1021 tgacttatgc ctccttaccc cggagatttc ggcgaatcct ttggcaggag tggcgcctgg
     1081 gagccggagc tcgagagcac cggcaccacg ctggaacagg cgcagccaca gccggtgccg
     1141 accggcgtgg cggggaaggt cgcggtggtc accgggggcg cgaccgggct gggccgctgc
     1201 atcgcgatgg aatttgcccg gatgcgctgc aaggtggcgt tctgcttcgt ggagcttccc
     1261 ggacgggatg tgaccgaaca ggcgctgctc accgagacgg cgtgcaccgc catgggcgcc
     1321 gaagtctatg ccgcccgctg tgacgtgcgg gaccggggcc aggtggagcg gtttctgtcg
     1381 gatgtgaccc accgcttcgg cacggtgcac tacctggtga acaacgccgg catcgcgatg
     1441 gacggggcgc tctggcgcct ctccgacgag gcctggcgcg aggtgatcga taccaacgtc
     1501 accggtgcgt tcaactgtat ccgcggtgtc tcgccgacct tccggaaaca gcatttcggc
     1561 aagatcgtga gtgtcagcgc ccaccaggcg gggcggccgg gcttcggggt ctcgaactac
     1621 gccgccagca aggctgcgct cgaggggctt acccgcgccg cggcggtcga gctgggtccc
     1681 gccaacgtca acgtcaacgc ggtggctccc gggttcatcc gcaccgagcg gctgatgatg
     1741 ctcccccgcg aggtgatcga acgggcccag aagcacagcg tcctgggccg ggtggcggag
     1801 ccggaggacg tggcgcacgt gatcaccttc ctctgctccg acgaggcgcg tcacatcacc
     1861 gggcagacca tcgtggtgga cgggggcctc tcgctggaat aggcctcgtt gcccggcttt
     1921 tccgcctccg cagtccggtt tactttcccc cccgtgctga accgccccgt cgccgcactg
     1981 ctggccctgc tgaccctcgc ctgcgggggg aagtcggcca aacccgcgcc tgaacccgcc
     2041 acgccggccc gcgagccggt ccggcccctc atcacgacgc ccttcgccgg ccagatcatc
     2101 gcggtcaccc cgctgaccct ggtggtgggg gaggagccga tcaccagcca gccgccgctc
     2161 accgaccggg tgcggacgct gttctgggcc gactcgctgc tcgccgccgc cgccaccggc
     2221 cggagccccg aggtgaaatg ggtgctgccg gccgagctcc gcaagatggc gcgccgggcc
     2281 cccaccgtgg cgcccgatcc cgaccgcatg ggccagtcgc tcctgcgcgg ttccaagatc
     2341 gacgaggtgc ccgacccgct gcggagcaat ctccgttcgc tcatggcgat cgccggcggc
     2401 cgctatgtgc tggtgccggc cgcgctcgcc ttcgtgaacg aaccggccgg ggcgccgctc
     2461 ccggtgcggg ccgagctgtc gctggcgctg gtggataccc gcaccggcaa ggtggtctgg
     2521 cggtcggtgg cctgggccac cggcgccacc cccgaacgag ccctcgtggc cgcgctcaac
     2581 tttgtcttcc ccgtgggact gggactccga tgacgtacaa cgtgacgctg attccgggcg
     2641 atggaatcgg gcccgaaatt accgccgaga cggtgaaggt cctcgaagca accggcctca
     2701 agttcgagtg ggatgagcag ctggcgggcg tggccgcggt cgacgcgacc gggaccccgc
     2761 tccccgacgc gaccatcgaa agcatccggc accggaagct ggccctcaag gggccgctca
     2821 ccaccccggt cggcaccggc ttccggtcgg tgaatgtgca gctgcgcaag gaattcgagc
     2881 tgta
//
LOCUS       DATIFF010001015         3061 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_127622, whole genome shotgun sequence.
ACCESSION   DATIFF010001015 DATIFF010000000
VERSION     DATIFF010001015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3061
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127622"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            36..>3061
                     /locus_tag="VLD58_14780"
     CDS             36..>3061
                     /locus_tag="VLD58_14780"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HSB55622.1"
                     /translation="MALSLTDLDLDVPRAYLDTVPLQGTLTGTVEGDGFLDGLDLGTD
                     VVFHDRMVPGGADNAIQAQGHLAFGGDEGTLFDTLALRHADFDLRTVALQAPVVELKG
                     RMQLEGTLTGPWKNLTFTGVMRHHDGDLPESKATGYARLDTRRDTVRFDTRMELAPLA
                     FAGVRPGYPAIPLQGAVEGTVALSGKPDSFYTMAVVTGAIGTVAVQGVLHPGEGRLGA
                     DSLVARFGGLDLARVRGTGPHTVLTGRLAANGVLDTATGPEGTLELALTRSSARGINV
                     DSVHAVLHGQGGTVVLDTAIATWPAGRVDGKGAIGWKNRIDDHILLAFVADSLHAFDS
                     LLTAYTESASDSTGPAARLASLDTLVNRINRTPADTAGEPAPLTGKARGEVELVGSIE
                     TPRVLVRARAEELGWRGITTPALSMGFGWNGVARPEVGLAVNADTVLLGRVEVRDLDF
                     AAGGFQDSLRWSGSALLGGSTGVSGAGAYWTTGAAPVVSFDSLLAALPSRRWRLRQPA
                     TVVLNDGRYELSGIDLGATDGSGSVILDGAIPRSGPANLQVSVLGLQLRDVYTMLQMD
                     TTGVSGSIQLDLGVGGTAASPTLRGTMTVADLSFGDFGSPFVQGVLDYADRRLDANLL
                     LWKTGQNVLRVEAKLPLDLALKSVRRRQVEGQLSIRAIADSTDLAVAEAFTRSIRRVR
                     GMLKADVEVGGTWDDPRLAGFIELQNASAQLPGLGVSWEKANMRARLSGDSITLDSLV
                     VRSGQGSLRGTGGLRVERLTRPVFNLRIATRRFRIIDDRRFLTLDATGDVLLTGPIFQ
                     PHLTGRVTADEGTLHFADLITKRIVDLENPGDSGLIDLNLVRNEKLGSNFQNRFMDSL
                     TIDTLRLQMGESFWLRSSEANIQLDGSITVEKRKAQYRYDGTLNAVRGNYALRIGGFV
                     TKDFTVDRGTVRYFGTPDLNADLDIEAKHVVIAAETGEEIPVTARITGTMLQPRLELQ
                     TAPTANRPALSQTELVSYLMFGRPTFSLQGTNGQGS"
BASE COUNT          463 a         1105 c         1033 g          460 t
ORIGIN      
        1 tcaccgactc ccgccgcggg ctcggagtcg agggcatggc gctttcgctc accgacctcg
       61 atctcgacgt gccgcgggcc tatctcgata cggtcccgct gcagggcacg ctgaccggca
      121 cggtcgaggg cgacggtttc ctcgacgggc tcgacctggg aaccgacgtc gtcttccacg
      181 accgcatggt gccgggcgga gccgacaacg ccattcaggc tcagggccac ctcgccttcg
      241 gcggggatga ggggacgctg ttcgacacgc tggcactgcg acacgccgat ttcgaccttc
      301 gcaccgtggc gctgcaggcg ccggtggtgg agctcaaggg gcggatgcag ctcgaaggaa
      361 cgctgaccgg gccgtggaag aacctgacct tcaccggcgt catgcggcac cacgacggcg
      421 acctccccga gagcaaggcc accggatatg cccgcctcga tacccgccgc gacacggtcc
      481 ggttcgacac ccgcatggag ctcgcaccgc tcgcctttgc cggggtgcga cccgggtatc
      541 ccgccatccc cctgcagggt gccgtcgaag gtaccgtcgc gctgagcggc aagcccgaca
      601 gtttctacac catggcggtg gtgaccggcg cgatcggcac cgtcgccgtg cagggcgttc
      661 tgcatccggg cgaggggcgc ctcggcgccg acagtctggt cgcccgcttc ggaggcctcg
      721 atctcgcccg ggtgcgcggg accggtcccc ataccgtgct caccgggcga ttggcggcca
      781 acggcgtgct cgacacggcg acgggacccg agggcactct cgagctcgcc ctcacccgga
      841 gcagcgcccg cggcatcaac gtcgactcgg tgcacgcggt ccttcacggc cagggcggta
      901 cggtggtgct cgacacggcc atcgccacct ggcccgccgg ccgggtcgac gggaagggcg
      961 ccatcgggtg gaagaaccgg atcgacgatc acattctgct tgccttcgtg gccgacagtc
     1021 tccacgcctt cgattcgctg ctgaccgcct acaccgaatc ggcgagcgac agcaccggtc
     1081 ccgccgcccg gctcgcatcg ctcgacaccc tggtcaaccg gatcaaccgc acgccggccg
     1141 acaccgcggg cgagccggct ccgctcaccg gcaaggcgcg tggcgaagtg gagctggtgg
     1201 gctcgatcga gacgccgcgg gtgctggtgc gggcccgcgc cgaggaactg ggctggcgcg
     1261 gcatcacgac gccggcgctt tccatgggct ttggctggaa cggggtggcg cggcccgagg
     1321 tcggcctggc ggtcaacgcc gataccgtct tgctgggccg ggtcgaggtg cgcgatctcg
     1381 acttcgcggc cggcgggttc caggactcgc tccgctggtc gggctcggcg ctgctgggcg
     1441 gttcgaccgg cgtctccggc gccggcgcct actggacgac cggcgccgca ccggtggtga
     1501 gtttcgacag tctgctcgcc gccctcccct cgcgcaggtg gcggctccgc cagcccgcga
     1561 cggtggtgct caacgacggg cgctatgaac tctccgggat cgatctcggc gccaccgatg
     1621 ggtcgggctc ggtcatcctc gacggcgcga ttccgcgctc cggccccgcc aatctccagg
     1681 tgagtgtcct ggggctgcag ctccgcgacg tgtacaccat gctgcagatg gacaccaccg
     1741 gggtctccgg gagcatccag ctcgacctgg gcgtgggtgg caccgcggcc agcccgacgc
     1801 tccgcggcac gatgaccgtc gccgacctct ccttcggcga cttcggctcg cccttcgtgc
     1861 agggtgtgct cgactatgcc gaccgccggc tcgacgccaa cctgctgctc tggaagaccg
     1921 gacagaacgt gctccgggtc gaggccaagc ttccgctcga cctggcgctc aagtcggtcc
     1981 gccgccgcca ggtggaggga cagctctcga tccgcgccat cgccgacagc accgacctcg
     2041 cggtggccga ggccttcacc cgctcgatcc gccgggtgcg gggaatgctc aaggccgatg
     2101 tcgaagtcgg cggcacctgg gacgatcccc ggctggccgg cttcatcgag ctgcagaacg
     2161 ccagcgccca gcttcccggt ctcggcgtca gctgggaaaa ggccaacatg cgggcccggc
     2221 tctcgggcga ttccatcacc ctcgattcgc tggtggtccg gagcggacaa ggctcgctcc
     2281 ggggcaccgg cgggctccgg gtcgaacggc tcacccggcc ggtattcaat ctccggatcg
     2341 ccacccggcg gttccgtatc atcgacgacc ggcgcttcct cacgctcgat gccaccggcg
     2401 acgtgctcct caccgggccg atcttccagc cgcacctcac cggccgggtc accgccgacg
     2461 agggtacgct gcacttcgcc gacctcatca ccaagcggat cgtggacctg gagaacccgg
     2521 gcgactcggg gctcatcgac ctcaacctgg tgcggaacga gaagctcggc tcgaacttcc
     2581 agaaccgctt catggactcg ctcacgatcg acaccctccg gctccagatg ggtgagagct
     2641 tctggctccg gtcgagcgaa gccaacatcc agctcgatgg cagcatcacc gtggagaagc
     2701 ggaaggcgca gtaccgctac gacgggaccc tcaacgcggt gcggggcaac tacgccctcc
     2761 ggatcggcgg gttcgtcacc aaggacttca cggtcgatcg cggtacggtg cggtacttcg
     2821 ggacgcccga cctgaatgcc gacctcgaca tcgaggcgaa gcatgtcgtg atcgcggccg
     2881 agaccgggga ggaaatcccg gtgacggcgc ggatcaccgg cacgatgctc cagcccaggc
     2941 tcgagctgca gacggcgccc accgccaacc gcccggcgct gtcccagacc gaactggtga
     3001 gctacctgat gttcgggcgg cccacgttca gtctccaggg caccaacggg caggggagcc
     3061 a
//
LOCUS       DATIFF010001016         1044 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1051843, whole genome shotgun sequence.
ACCESSION   DATIFF010001016 DATIFF010000000
VERSION     DATIFF010001016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1051843"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1044)
                     /locus_tag="VLD58_14785"
     CDS             complement(<1..>1044)
                     /locus_tag="VLD58_14785"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HSB55623.1"
                     /translation="HPLRAMGYGGLVIAILTRPVFWIRIGLPSRHWWPTGTEAGAGLD
                     ALGRMGVAGYVQPIRILVEVPKGRTVTQAQSLRGLRTLSDSLRADPRVREVRSLVDLE
                     PGQSLLAYSVLYSDLEAARRQYPDFIDAYLSADRRLTLMDVILADTTSLTSAQDLVVR
                     ARELARHPVRSTRGMTLMVGGYAAAAYDFQEDLLARFPLLVALILGATVVMLAIAFRS
                     VLVPIKAIIMNTLSVAGTFGLIVLVFQLGFGSSVFGLDGPTSAIFVVIPVLVFAVVFG
                     LSMDYEVFLLSRIKEAYDRSGRNTQATMEGLSATASVITSAALIMILVFGIFAFARVL
                     AMQLLGFGLAVAVL"
BASE COUNT          196 a          364 c          356 g          128 t
ORIGIN      
        1 caggaccgcg accgcgagcc cgaagcccag cagctgcatc gcgagtaccc gggcgaaggc
       61 gaagatcccg aacaccagga tcatgatgag cgccgcggag gtgatgaccg acgccgtggc
      121 gctcaggccc tccatggtcg cctgggtgtt ccgccccgag cggtcatagg cctccttgat
      181 ccggctgagc aggaacacct cgtagtccat gctgagcccg aagaccaccg cgaataccag
      241 caccgggatg accacgaaga tcgccgaggt cggcccgtcc aggccgaaga ccgacgagcc
      301 gaagccgagc tggaacacca gcacgatgag tccgaaggtg ccggcgaccg acagggtgtt
      361 catgatgatg gccttgatcg gcaccaggac cgagcggaag gcgatcgcca gcatcaccac
      421 cgtggcgccg aggatcagcg ccaccagcag agggaagcgc gccaggaggt cctcctggaa
      481 gtcgtacgcc gccgcagcgt agcccccgac catcagcgtc atcccccggg tgctccggac
      541 cgggtggcgg gccagctccc tcgcccgcac caccagatcc tgagccgagg tgagcgaggt
      601 ggtgtcggcc agaatgacgt ccatcagggt gagccggcgg tcggcactga gataggcgtc
      661 gatgaagtcg ggatactgcc gccgtgccgc ttcgaggtcg ctgtagagca ccgagtaggc
      721 cagcagcgac tgtcccggct cgagatcgac caggctccgc acctcccgca ctcgcggatc
      781 ggcccggagg gaatcgctca gcgtacggag cccccggagc gactgggcct gggtgaccgt
      841 ccgccccttg ggcacttcca ccaggatccg gatcggctgg acgtaccccg ccacgcccat
      901 ccggcccagg gcatcgagcc cggcaccggc ctcggtgccg gtgggccacc agtgccggga
      961 gggcagcccg atccggatcc agaagaccgg ccgggtgagg atggcgatca ccagcccgcc
     1021 gtagcccatc gcccggagcg ggtg
//
LOCUS       DATIFF010001017         1922 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1974301, whole genome shotgun sequence.
ACCESSION   DATIFF010001017 DATIFF010000000
VERSION     DATIFF010001017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1922
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1974301"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(197..1801)
                     /locus_tag="VLD58_14790"
     CDS             complement(197..1801)
                     /locus_tag="VLD58_14790"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSB55624.1"
                     /translation="MTFKLVSFTGDQDFELAADHPFVVGRAVTSDIPIFDPTISRRHA
                     ELRVVKGGVQVRDLGSSNGTFINGTRVTEGMIEPNDSVTFGKVVFQLKPIESASRPIT
                     ASTPSAAGGTIVKQVSMSGGVPAVIVGQVAEATAKDGAGQLKLAGASHTERQARKLSL
                     LLEVSQKLSGELDLDKLLGRVVGTTFDVMNVDRVSVHLSTETGDLVPRVSKSRLGDAS
                     AQLVPRSIARKAVEERVAILTDNAVADDRFKGGQSIMLQSVRSAMCIPLMAGPEQVLG
                     ILYVDNLTATNSFVDEDLQFLIAFGGLAAIAIKNSRFAEQIQREAMVRSNFERYFAPN
                     VAAEIAQQEGAVKLGGDKRPVTILFSDIRGFTSMSEHMSPDSIASLLSDYFTEMVDII
                     FAHGGTLDKFIGDAIMALWGAPIGHEDDPDRAMQAAIAMQRAIALLHEKWEAQGRPGI
                     SVGIGINYGETFAGNIGSHLRLEYTVIGDAVNVASRLCSNAHGGEVLISDPFYQMLKQ
                     KPAVNARAPLVVKNRAQAVSVWSVVV"
BASE COUNT          299 a          627 c          652 g          344 t
ORIGIN      
        1 atagatggcg acttcttcgg ggtgatggga ctgccggtga gactggtact gcgactgctg
       61 gaagaggcgg gcgtggagta tcgcttcggc cggtaggctc cgtccccctg gtggccgcgt
      121 tcagtggcgc tcgggtccat ccccctcgac cctcacgctt ggcgacccga cgctgccgcc
      181 ttgccgcctt gccgccctaa accaccacgc tccacaccga caccgcctgg gcccggttct
      241 tgacgaccag cggcgcccgc gcattcacgg ccggtttctg cttgagcatc tggtagaacg
      301 ggtcgctgat cagcacctcg cccccgtggg cattggagca cagccggctg gcgacgttca
      361 ccgcatcgcc gatgaccgtg tactccagcc gcaggtggct gccgatgttc cccgcgaacg
      421 tctcgccgta gttgatcccg attcccacgc tgatgcccgg ccggccctgg gcctcccact
      481 tctcgtggag cagtgcgatg gcgcgctgca tcgcgatcgc cgcctgcatc gcccggtcgg
      541 ggtcatcctc gtgcccgatg ggcgcgcccc agagggccat gatcgcgtcg ccgatgaact
      601 tgtcgagcgt cccgccgtgg gcgaagatga tgtccaccat ctcggtgaaa tagtccgaga
      661 gcaggctcgc gatcgaatcg gggctcatgt gctccgacat cgaggtgaac ccccggatgt
      721 cggagaagag gatcgtgacc gggcgcttgt cgccgcccag cttcaccgcc ccctcctgct
      781 gcgcgatctc ggccgccacg ttgggcgcga agtagcgctc gaagttggag cggaccatcg
      841 cctcgcgctg gatctgctcg gcgaagcggc tgttcttgat ggcgatcgcg gcgagtccgc
      901 cgaaggcgat caggaactgg aggtcttcat cgacgaacga attggtggcg gtgagattgt
      961 cgacgtaaag gatcccgagc acctgctccg ggccggccat gagcggaatg cacatcgcgc
     1021 tccgcacgct ctggagcatg atcgactggc cgcccttgaa gcggtcgtcg gccacggcgt
     1081 tgtcggtgag gatcgcgacc cgctcctcca ccgccttccg cgcaatggaa cggggcacca
     1141 gctgggcgga ggcgtctccc aggcggctct tggagacgcg ggggacgaga tcgccggttt
     1201 cggtggagag atgaaccgag acccggtcga cattcatgac gtcgaaggtg gtgcccacca
     1261 cccgacccag cagcttgtcg aggtcgagtt cgccggagag cttctgcgag acctcgagga
     1321 ggagcgagag cttccgggcc tgtcgctccg tgtggctggc tcccgccagc ttgagctgcc
     1381 cggcgccatc cttggccgtc gcctcggcca cctgccccac gatgaccgcc ggaacgccgc
     1441 cgctcatcga gacctgcttg acgatggtgc cgccggcggc gctgggagta gaggcggtga
     1501 tcgggcggga ggcgctttcg atcggcttga gctggaagac gaccttgccg aacgtgaccg
     1561 agtcgttggg ctcgatcatc ccctcggtga cacgggtgcc gttgatgaag gtgccgttgg
     1621 agctgccgag gtcgcgcacc tgcaccccgc ccttgaccac ccgcagctcg gcgtgccgcc
     1681 gggagatggt ggggtcgaag atggggatgt cactggttac ggcgcgcccc acgacgaacg
     1741 ggtggtccgc agccagctcg aagtcctgat cgccggtgaa ggagacgagc ttgaaggtca
     1801 tggagtgagg aaatataggg cggcggggtc gagggtggag ggtcaagagt cgagagtcgg
     1861 ggctcattct ccccgcttct gctcatgatt cccgactctt gaccctcgac tcttgacccc
     1921 cc
//
LOCUS       DATIFF010001018         2006 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1513216, whole genome shotgun sequence.
ACCESSION   DATIFF010001018 DATIFF010000000
VERSION     DATIFF010001018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1513216"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..650
                     /locus_tag="VLD58_14795"
     CDS             <1..650
                     /locus_tag="VLD58_14795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55625.1"
                     /translation="QLLAMAVDAMFEPFTVSVMLDSNGSNTTAVAAVVKIEQALGNLK
                     DRRVVVLAGTGPVGQRAAGLLARDGARVLITSRKPEQGEKARQFISARFNVQVEATTF
                     ADPSQLAHVLDGAEVLLNSGPAGVQMVSKAAWTAIKSLKILVDLNAVPPLGLEGVEVN
                     DAGSLREGIPAFGAFGVGNFKTKLHKRCIGSLFERNDLVLDAEKIAEIARHMARK"
     gene            799..1842
                     /locus_tag="VLD58_14800"
     CDS             799..1842
                     /locus_tag="VLD58_14800"
                     /inference="COORDINATES: protein motif:HMM:NF018968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1464 family protein"
                     /protein_id="HSB55626.1"
                     /translation="MPRVIGIDPGTVSIDLLGLADGQVWLDRSLPTSRALADPDVLLS
                     QLVEGGTPELIAGPSGYGLPLVPGERLTDTDLRLALLAAEGDAGGIGGLRRLLRALAD
                     SGLPVVFTPGVIHLPSVPSHRKLNRVDLGTADKVAAAALAMRDQADRLRLPASATSFF
                     LLELGGAFTAALAVEQGQVVDGVGGTSGPIGWQAGGAWDGEVAFLAGTVTKAMLFQGG
                     RAGPHADPDGDMVGLEAWLEGAHKAALALMAAVPEPREIFLSGRHAAEPEVHSRLVPR
                     LSAIAPVRDLAGFAAVAKQGAQGAALLADGLAEGRHRDLVDALRLREAGGTALDYLKV
                     ISPAEARRRLGIT"
BASE COUNT          301 a          702 c          694 g          309 t
ORIGIN      
        1 aacagctcct cgccatggcg gtggacgcca tgttcgagcc gttcacggtt tcggtcatgc
       61 tcgattcgaa cgggtccaac accacggcgg tggctgcggt cgtgaagatc gagcaggcgc
      121 tgggcaacct gaaagaccgc cgggtggtgg tgctcgccgg taccggcccg gtggggcagc
      181 gcgccgccgg tctgctggcg cgcgatggcg cccgggtcct catcacctcg cgcaagccgg
      241 agcagggcga gaaggcccgg cagttcatca gcgcccggtt caacgtgcag gtcgaggcca
      301 ccaccttcgc cgacccatcc cagctcgccc acgtgctgga cggcgcggag gtgctgctca
      361 actccggccc cgccggggtc cagatggtct ccaaggcggc ctggacggcg atcaagtcgc
      421 tcaagatcct cgtggacctc aacgccgtgc cgcccctcgg actcgaaggg gtcgaggtga
      481 acgacgccgg ctcgctgcgc gaggggatcc cggctttcgg cgccttcggc gtgggcaact
      541 tcaagaccaa gctgcacaag cgctgcatcg gctccttgtt cgaacggaac gacctcgtgc
      601 tcgacgccga aaagatcgcg gagatcgcgc ggcacatggc gcggaagtga cgattgctga
      661 tttgcaattg ctgattgacg attgggaggc ccttccgacg taaccgtcaa tcagcaatcg
      721 gcaatcggca atcgccaatc cgcaatccgc aaccgcaatc ctcaatcagc aatcatcaat
      781 cagcaattcc gtctccccat gccccgcgtc atcggcattg accccggcac cgtttccatc
      841 gacctgctgg gtctggccga cggccaggtc tggctcgacc ggagcctgcc cacctcccgg
      901 gcactggcgg acccggacgt gctgctctcc cagctggtgg aaggaggcac gccggagctg
      961 atcgccggtc cgtccggtta tggcctcccg ctcgtaccgg gcgagcgcct caccgacacc
     1021 gacctcaggc tggcgctgct cgcggcggag ggcgatgccg gcggcatcgg cggcctgcgc
     1081 cgcctgctcc gcgcgctggc cgactccggg ctgccggtag tgttcacccc cggcgtgatc
     1141 cacctgccgt ccgtccccag tcaccgcaag ctgaaccggg tggaccttgg cactgcggac
     1201 aaggtggccg cggcggcact ggccatgcgg gaccaggccg atcggctgcg gctgcccgcc
     1261 agcgcaactt ccttctttct gctcgagctc ggtggcgcct tcaccgccgc gctggccgtg
     1321 gaacaggggc aggtcgtaga cggggtcggc ggtaccagcg ggccgatcgg gtggcaggct
     1381 gggggcgcct gggacggtga ggtggctttc ctcgccggca cggttaccaa ggcgatgctg
     1441 ttccagggcg gccgggcggg cccgcacgcc gacccggatg gcgacatggt ggggctcgag
     1501 gcctggctcg agggtgccca caaggccgct ctcgccctca tggcggcggt gccggaaccg
     1561 cgcgagatct tcctttccgg ccgtcacgct gccgagcccg aggttcactc acgcctggtc
     1621 cctcgattga gcgcgatcgc gccggtccgg gacctcgcgg gattcgccgc cgtggccaag
     1681 cagggtgccc agggcgcagc tctgctggcg gacggtctcg ccgaagggcg ccaccgcgac
     1741 ctggtggacg cgctccgtct ccgcgaggcg ggtggcacgg cgctggatta cttgaaggtg
     1801 atctcgccgg cggaggcgcg tcgccggctc ggcattacct gacaccgagg ctttgcgccg
     1861 gcgtcaggcg gaacggcgct gcgcgagcca ggccaccgca accgccggcg cgcaatcgga
     1921 cgcccgctcg cgcgccccgt cgctgcaagg aaggaggctc ccgaaggcaa tcgaggaacg
     1981 tccgaagcgg gcactgatcg ccggca
//
LOCUS       DATIFF010001019         1821 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1358573, whole genome shotgun sequence.
ACCESSION   DATIFF010001019 DATIFF010000000
VERSION     DATIFF010001019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1358573"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..753)
                     /locus_tag="VLD58_14805"
     CDS             complement(<1..753)
                     /locus_tag="VLD58_14805"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSB55627.1"
                     /translation="MTGRRVLVVDDEESVRWALTRALEHAGYQVDLAADGQSGSAAAE
                     NPDVDLVLLDVRLPGRDGLAVLGDLRKRRPDLPVIMMTAYGTLQVAVEAMKQGAYDYI
                     GKPFDVDEVLLVVGKALEAQALAREVSQLRRQTEERFDLGGIVGGSPAMQQIFKAVGK
                     VAGTDLTVLLRGESGTGKELIARAVHENSRRQGRPFVPVNCAAIPRELLESELFGHEK
                     GAFTGAAAARRGRFEQADGGTLFLDEVGDIGPK"
     gene            complement(750..>1821)
                     /locus_tag="VLD58_14810"
     CDS             complement(750..>1821)
                     /locus_tag="VLD58_14810"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSB55628.1"
                     /translation="HEDLLSSFQDGVIILDPDGRIVAMNPAAEELTGFSRSHVAGRPL
                     GDVFPSPSPLATLAAKTVAMNRSHADFDAHVVRSDGTRLTVSTVVSLVSDPTGRNRGI
                     VLVLRDSSRVRDMEEQLRRSDRLAALGVLAAGVAHEVRNPLVGIRAAAQLMEREPAFP
                     PSLREFTGIIIRQVDRLNRIVSDLLSFAGQQPLQRRLCNINQILEEALHLLASTLEGA
                     RIAVLRRYDPEVPAVAGDPDRLLQVFLNLIRNGVEAMANGGELTVRTRFERVAPPCGG
                     RAAAVAEIADRGPGIPPEAQRNLFNPFFTTKNGGTGLGLPISVRIVEEHGGAMEVLSG
                     VGEGSTFRVLLPLAGDEEGTRT"
BASE COUNT          292 a          671 c          575 g          283 t
ORIGIN      
        1 cttcgggccg atgtcgccca cctcgtcgag gaacagggtg cccccgtcgg cctgctcgaa
       61 gcggccgcgc cgggccgccg cggcaccggt gaaggcgccc ttctcatggc cgaagagctc
      121 gctctccaag agttcccgcg ggatggcggc acagttgacc ggaacgaacg gacggccttg
      181 gcgccggctg ttctcgtgga ccgcgcgggc aatcaattct ttcccggtcc cgctctctcc
      241 ccggagcaag accgtgagat cggtgccggc caccttcccg accgccttga agatctgctg
      301 catggccggg ctgccgccca cgatgccccc gaggtcgaac cgctcctccg tctgccggcg
      361 aagctgggac acctcgcgcg ccagggcctg cgcctccagg gccttgccca ccacgaggag
      421 cacctcatcc acatcgaagg gtttcccgat gtaatcgtag gctccctgct tcatggcctc
      481 gaccgccacc tggagcgtcc cgtacgcggt catcatgatg accggcaggt ccggccggcg
      541 cttccgaagg tcgccgagga ctgccaagcc atcccgcccg gggaggcgca cgtcaagcag
      601 gacgagatcg acgtcgggat tctcggctgc cgcggatccg ctctggccat cggccgccag
      661 atccacctgg taccccgcgt gctccaaggc cctggtgagc gcccagcgca cgctttcctc
      721 gtcatccacg accagcactc gccttcccgt catgtgcggg tcccctcctc atcccctgcc
      781 agcgggagca ggacgcggaa tgtgctgcct tccccgacgc cgctcaggac ctccatcgcg
      841 cctccgtgct cctccacgat ccggaccgag atgggcaggc caagcccggt gccgccgttc
      901 ttggtcgtga agaacggatt gaaaagattc cgctgcgcct ccggcggaat tcccggtccg
      961 cggtccgcga tttcggcaac ggcggccgcc cggccgccgc acgggggcgc cacgcgctcg
     1021 aaacgcgtcc gcaccgtcag ctcgccgcca ttcgccatgg cctcgacgcc gttccggatc
     1081 agattgagga acacctgcag caagcggtcg gggtcccccg ccaccgcggg gacttcgggg
     1141 tcgtagcgcc ggagcacagc gatccgcgcg ccctccagcg tggacgccag caggtgcagc
     1201 gcctcttcga ggatctgatt gatgttgcat agccgccgct ggagcggctg ctggccggca
     1261 aagctgagca aatcgctcac gatccggttc agccgatcca cctggcgaat gatgatcccg
     1321 gtgaattccc gcaggctcgg cggaaacgcc ggctcgcgct ccatgagttg tgccgccgcc
     1381 cggatgccca ccaggggatt tcgcacctca tgcgccaccc cggccgccag gacacccagg
     1441 gccgcaagcc gatccgaccg gcggagctgc tcctccatgt cgcgcacccg ggacgaatcg
     1501 cgcaggacca gcacgatgcc tcggtttcgg ccggtcggat cgctcacgag cgagaccacc
     1561 gtgctgacgg tcagccgtgt gccgtccgag cgaacgacat gtgcatcaaa gtccgcgtgg
     1621 ctgcggttca tggcgaccgt cttcgccgcc aatgtggcaa ggggcgacgg cgacggaaac
     1681 acgtccccga gggggcggcc tgccacgtgc gaccgcgaaa acccggtcaa ctcttccgcc
     1741 gccggattca tcgcgacgat ccgaccgtcg ggatcgagga tgatgacacc gtcctggaag
     1801 ctggaaagca ggtcctcgtg a
//
LOCUS       DATIFF010001020         1692 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1665661, whole genome shotgun sequence.
ACCESSION   DATIFF010001020 DATIFF010000000
VERSION     DATIFF010001020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1665661"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..308
                     /locus_tag="VLD58_14815"
     CDS             <1..308
                     /locus_tag="VLD58_14815"
                     /inference="COORDINATES: protein motif:HMM:NF014027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008612 - peptidyl-lysine modification to
                     peptidyl-hypusine [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="deoxyhypusine synthase family protein"
                     /protein_id="HSB55629.1"
                     /translation="ATQRGNGQASPHMAAIQITTDNTVFGGLGGAGVHTECISWGKEA
                     ADGRNVMVFTDLTIALPLLCQGLAETYGPGHVRPARASIAADLRPALAVSAPAGPRS"
     gene            complement(409..1350)
                     /locus_tag="VLD58_14820"
     CDS             complement(409..1350)
                     /locus_tag="VLD58_14820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011793369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HSB55630.1"
                     /translation="MDMHKNARTTPHSRALIAERVAGGQSAAAVARELGVCERTVHKW
                     IARAAAGVLALEDRSCRPHHSPRAISAGLVVQIEGLRKLRWTAAVIAEAVGLSRATVA
                     RTLGQLGLSRLRGLEPAPPVRRYQWAEPGQLVHVDIKKLGRIGQIGHRITGDRRARAR
                     GIGWEFVHVCIDDCSRLAYAEVLADEQGATVAAFLRRAVAWYRRRGVLIQRVLSDNGS
                     GYRSRIVAAVCSALALAHRFTRPYTPRTNGKAERFIQTLLREWAYAVAYVSSAQRTAA
                     LRRWLHYYNWHRRHSALNGQPPISRVAQGDNLLRLHT"
BASE COUNT          284 a          597 c          543 g          268 t
ORIGIN      
        1 tggccaccca gcgcgggaat gggcaggcca gtcctcacat ggcggcgatc cagatcacca
       61 ccgacaacac cgtcttcggt ggcctgggcg gggctggcgt tcacaccgag tgcatctcgt
      121 ggggaaagga agcggccgac ggccggaacg tcatggtctt caccgacctc accatcgcgc
      181 tgcccctcct ctgccagggc ctggccgaga cctacggccc gggccacgtg cgccctgccc
      241 gcgcgtcgat cgccgccgac ctgcgcccgg ctctcgccgt ctccgctccg gcgggccctc
      301 gctcatgagc cgacgtcgcg ggcggaagga caccgggctc ccctccacgg gctgacccac
      361 gacccctccc ggcccgcgcc cggcatgagc tgagatggct cacgtcgcct aggtgtgaag
      421 tctcaacaga ttgtctccct gggcgacgcg gctgatgggc ggttgtccgt tgagggcgct
      481 atggcgccga tgccaattgt aatagtgcag ccaccgcctc aaagcggcgg tgcgctgcgc
      541 cgaggacacg taggcgacgg catacgccca ctcgcgcagc agagtctgga tgaagcgctc
      601 ggccttgccg ttcgtgcggg gcgtgtacgg gcgcgtgaag cggtgcgcca gggccagcgc
      661 gctgcacact gctgccacga tgcgggaacg atagccggag ccattgtcgc tgagcacccg
      721 ttgaatgagc acgccgcggc gccgatacca ggcgacggcc cgccgcagga aggcggccac
      781 cgtcgccccc tgttcatcgg ccaggacttc ggcataggcc aatcgcgagc aatcatcaat
      841 gcacacgtgg acaaactccc agccgatgcc ccgggcgcga gcccggcgat cgcccgtgat
      901 gcgatgaccg atctgcccga tgcggccaag tttcttgata tcgacatgca ccaattgccc
      961 cggctcggcc cactggtacc ggcgcaccgg cggcgccggc tccaagcccc tcaggcgcga
     1021 caagccgagc tgccccaagg tgcgggccac cgtggcgcga ctcagcccca cggcctccgc
     1081 gatgaccgcg gcggtccacc gcagcttgcg caggccctcg atctgcacca ccaggccggc
     1141 cgagatggcg cggggcgagt gatgcggtcg gcacgagcga tcctccagcg ccaggacgcc
     1201 ggcggccgcc cgggcgatcc acttgtgcac cgtgcgctca cacaccccca gctcgcgcgc
     1261 gacggcggcc gcggactggc ccccggcgac ccgctcggca atcaaggctc gactgtgggg
     1321 cgtggtccgg gcattcttgt gcatgtccat tcggggtccc tcccaagctt tgatggtcgt
     1381 ttggcgacaa ccaccatcgc agagaggccc cggatggaca atctcttgag acttcacacc
     1441 tagggcgtac gcactggaac gatgacgtat ccgccctatt gccttcgtgg cgcgatagac
     1501 gtgtcatcgc tggtacaacg tcccggtcgt cacgggagga tcgccatgag gcgaacagag
     1561 ttcttgaagg gcaccgtgtc gtctctcgca cttctatcta tccatggttg tctcacccag
     1621 aagctctacg agaagcacga gactgaatac gatgagacgg cgctgtcttt tctggtcacg
     1681 gaagatggtt cc
//
LOCUS       DATIFF010001021         3747 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1819806, whole genome shotgun sequence.
ACCESSION   DATIFF010001021 DATIFF010000000
VERSION     DATIFF010001021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3747
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1819806"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..438
                     /locus_tag="VLD58_14825"
     CDS             <1..438
                     /locus_tag="VLD58_14825"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB55631.1"
                     /translation="DPRVFQLTRATLDDLLQRATLTWVATTEQQVAGYLVALDSAAEY
                     DGEEFNWFRTRGQGFVYVDQIVVGADFRGRGIGSALYSDLEGWARDLGSTALTCEVHL
                     APPNPESYAFHRRRGFTELDRLDTSDGRRVALLHKMLTGETSR"
     gene            435..821
                     /locus_tag="VLD58_14830"
     CDS             435..821
                     /locus_tag="VLD58_14830"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HSB55632.1"
                     /translation="MNPGFDPQGFAREWALAWNARDLDRVLAHFENEVVFSTPKALDA
                     VGRPTVRGVAALRSYWEKALGRITSLRFTVQRAVWDPTLRELGIVYDREVNGASDRAL
                     ELLRFGPGGKVVSGEVFYGVQPGAGA"
     gene            818..1372
                     /locus_tag="VLD58_14835"
     CDS             818..1372
                     /locus_tag="VLD58_14835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55633.1"
                     /translation="MRQIMQRTAGLIACLAIGLGCAPRRPPFVEPDWGDAPPPYPSEI
                     TEITREYRHCAQQCSFDRLVIRRDGQVTRRFLTAGRLDSVLTARIDSVSFVQLVVALD
                     STGLFAPMVGAGEQVPLAVDSYLVSAATLCRRAVATWSPLADAGWTPGGHAVLLIEQA
                     AERLRWALPYTSVYQLSFRDGIRP"
     gene            1372..1866
                     /locus_tag="VLD58_14840"
     CDS             1372..1866
                     /locus_tag="VLD58_14840"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB55634.1"
                     /translation="MPSPLTIRPATPADAAALAELRFDFRATLDPPREERADFLDRCT
                     RWMRERLSAGSWRCWVAEEEGRLVGSVWLLPMEKLPNPVGEGEFHGYISNLYVMKQLR
                     GSGLGSELLARALEVCDAQGFDSVFLWPTARSRSLYLRHGFVAGGELLVRRVGPSPAH
                     GGSA"
     gene            1876..2346
                     /locus_tag="VLD58_14845"
     CDS             1876..2346
                     /locus_tag="VLD58_14845"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB55635.1"
                     /translation="MSFEIRILGPADTAVLTRVAEDVFDHPVDPALAETFLADPRHHL
                     AVAIDRGVVVGFASGVHYIHPDKAAELWINEVAVAPTHHGQGIGKAVVHALLVAGRQA
                     GCREAWVLTDDQNKAALNLYRAAGGKRTPVPQVMFSFDLDEVARPGSLKRITRP"
     gene            2343..3065
                     /locus_tag="VLD58_14850"
     CDS             2343..3065
                     /locus_tag="VLD58_14850"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSB55636.1"
                     /translation="MSDRRHAVPFDPEYFARRAREGERLDPAETFRHIWRSNHWAGSE
                     SVSGPGSGDDQTAAIRAALPVLFRRLGVRSILDLPCGDWQWMAKVPLEGIDYAGGDLL
                     TEVVEANRERYGGPGRRFLQLDLMRSPLPSADLILCRDCLVHLSFEDIGAAIANLERS
                     NITWLLTTTFPGERENADIVTGDWRPLNLEAPPFRFPPPVELLNEQCTEGRGAFSDKS
                     LGLWRLAQLHESPPKIWRSGPA"
     gene            3371..3718
                     /locus_tag="VLD58_14855"
     CDS             3371..3718
                     /locus_tag="VLD58_14855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55637.1"
                     /translation="MARTRVARRPAAKARRPKIKLPAARRGRRLPPGMVRLDYPKVRG
                     YLVRIGYTRTKTGWVPKYKAYFSDTRCGGKSKARAAADKWLADLVRTGRPPKVIANTE
                     PARARRPRLARAR"
BASE COUNT          567 a         1311 c         1245 g          624 t
ORIGIN      
        1 gatccccggg tcttccagct cacgcgggcc accctcgacg acctcctcca gcgcgccacg
       61 ctcacatggg tggcgaccac cgagcagcag gtggcgggct acctggtggc gctcgacagc
      121 gctgccgagt acgacggcga agagttcaac tggtttcgaa cccggggaca gggcttcgtg
      181 tacgtggatc agatcgtggt cggggccgac tttcgcggcc ggggcatcgg gagcgcgctc
      241 tactccgacc tggagggctg ggcccgggat ctcgggtcga ccgcgctgac ctgcgaggta
      301 cacctggcgc cgccgaaccc cgagtcgtac gcctttcacc gccgccgcgg ctttaccgaa
      361 cttgaccggc tggacaccag tgacgggcgg cgggtggcgc tcctgcacaa gatgctgacg
      421 ggggaaacgt cgcggtgaac cccgggttcg acccgcaggg ctttgcccgg gagtgggctc
      481 tcgcatggaa cgcccgcgac ctggacaggg tgctggcgca cttcgagaac gaggtggtct
      541 tttccactcc caaggcgctc gatgcagtcg gccggcccac ggtacgaggc gtggcggcgc
      601 tccgctccta ttgggagaag gcgctgggcc ggatcacatc gctccggttc acggtgcagc
      661 gcgccgtgtg ggatccaacc ctccgtgaac tcggcatcgt gtatgaccgc gaggtcaacg
      721 gggccagcga ccgggccctc gagctgcttc gcttcgggcc cggcggcaag gtggtgagcg
      781 gcgaggtctt ctacggcgtg cagccgggag ccggagcgtg aggcagatca tgcagcgcac
      841 cgccggtctc atcgcctgtc tggcgatcgg gctcgggtgc gcaccacgcc gtccgccctt
      901 cgtcgagccc gactggggcg acgcgcctcc tccctatccc agcgagatca ccgagatcac
      961 ccgcgagtat cgccattgcg cccagcagtg cagcttcgac cggctggtga tccggcgcga
     1021 cggccaggtc acccggcgct tcctcaccgc cggccggctc gacagcgtcc tgacggcgcg
     1081 catcgattcg gtttcgtttg tccagctggt ggtggcactc gatagcaccg ggctctttgc
     1141 ccctatggtc ggcgcgggcg aacaggtacc gctcgcggtc gacagctacc tggtctcggc
     1201 cgcaaccctc tgccggcgcg ccgtcgccac ctggtctccc ctggccgatg ccggctggac
     1261 ccccggaggc cacgcagtcc tcctgatcga gcaggcggcc gagcggttgc gctgggccct
     1321 gccctacacc tccgtctatc agctctcgtt ccgggacgga attcggccgt aatgcccagc
     1381 ccgctgacaa tccgcccggc tacgcccgcc gacgcggcgg cgctggcgga actccgtttt
     1441 gacttccgcg ccaccctgga ccctccccgg gaggaacgcg ccgatttctt ggaccgctgc
     1501 acccgctgga tgcgggagcg cctctccgcc gggagctggc gatgctgggt ggccgaggag
     1561 gagggccggc tggtcggctc ggtctggctc ctccccatgg agaagctccc caatccggtc
     1621 ggcgaaggag aattccacgg ctacatcagc aacctgtatg tcatgaagca gctgcgcggc
     1681 agtggtctcg gctccgagct cctcgcccgg gcgctcgagg tctgtgatgc ccagggattc
     1741 gactcggtct ttctctggcc tacggcacgg agccggagcc tctacctccg tcatggtttc
     1801 gtggctggcg gcgagttgct ggtgcgacgg gtggggccct cgccggccca tggcggatcg
     1861 gcatagaatc ccggcatgag cttcgagatc cgcatcctgg gcccggccga tacggccgtc
     1921 cttacccgag tggccgagga cgtattcgac catccggtcg atccggcact ggcggagacc
     1981 ttcctcgccg atccccgtca ccacctcgcc gttgccatcg accgcggcgt ggtggtgggg
     2041 tttgcctcgg gagtgcacta catccatccc gacaaggcgg ccgaactctg gatcaacgag
     2101 gtggcggtgg ccccgacaca tcacggccag ggcatcggca aggcagtggt gcatgcgctg
     2161 ctggtggccg ggcgacaggc gggatgcagg gaggcgtggg tgctgaccga cgatcagaac
     2221 aaggcggcgc tcaacctcta ccgcgccgcg ggcgggaagc gaaccccggt accccaggtc
     2281 atgttcagct tcgatctgga cgaggtggcc cgccccggca gtctcaagcg gatcacccgc
     2341 ccgtgagcga ccggcgtcac gccgtcccgt tcgaccccga gtacttcgcc cggcgggccc
     2401 gggaaggcga gcggctcgat ccggccgaga ccttccggca catctggcgc tcgaatcact
     2461 gggccgggag tgagtcggtc tccggacccg gctccggtga tgatcagacc gcggcgattc
     2521 gggccgcgct gcccgtcctc ttccggcggc tcggagtgcg gtcgatcctc gaccttccct
     2581 gtggcgactg gcagtggatg gcgaaggtgc cgctggaggg aatcgactat gccggcgggg
     2641 atctgcttac cgaggtagtc gaggcgaatc gggaacggta cggcggcccc ggcaggcgtt
     2701 tcctgcaact cgacctcatg cgctcaccgc tgccctcggc cgatctcatc ctctgccgcg
     2761 attgcctggt gcacctctcc ttcgaagaca tcggcgccgc aatcgcgaac ctcgagcgca
     2821 gtaacatcac ctggctcctg acaaccacgt tcccgggcga gcgcgagaac gccgacatcg
     2881 tcaccggcga ctggcgcccg ctcaacctcg aagccccgcc tttccgcttc ccaccaccgg
     2941 tcgagttgct caacgagcag tgcaccgagg gccgcggcgc cttcagcgac aagagtctcg
     3001 gcctatggcg cctcgcccag cttcacgaaa gcccaccgaa gatttggcga agcgggccgg
     3061 catgatcctg cacggacagc tccccctcca cggtgagatc gtgaaggaca acttgtccga
     3121 tcttgcgccg tctgcggccg ataaagggac catgaacacg cgctcgcctt taccgtttgt
     3181 tagctgatcc agaaactggt ggctcggggg gtctgtcact ttcccacact tcgaagtacc
     3241 ttgttagccg ccgggtgggc gccagcctgc ccggtcttac cgcagatgag ggccgatcag
     3301 catcggagag attccccctg actctcgcct gacgcccggc ccaccttgac ccttcgtata
     3361 ggagtacccc atggctcgca ctcgagttgc gcgccggccg gcagcgaaag ctcgccgacc
     3421 gaagatcaag ctacccgccg cccggcgggg acgccgcctg ccgcccggca tggtccggct
     3481 cgattacccg aaagtgcgcg gatatctcgt gcgcatcggc tacacccgga cgaagaccgg
     3541 ctgggtgccg aagtacaagg cgtatttcag tgacacccgc tgcggcggca agtcgaaggc
     3601 ccgcgccgcg gctgacaagt ggctggccga tctggtccgt accggccgtc cgcccaaggt
     3661 gattgcgaat accgagccgg cgcgcgcccg tcgcccgcgt ctcgcccggg ctcgttagca
     3721 ccggcggccc tcggggtggg ccgcggc
//
LOCUS       DATIFF010001022         5118 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2282027, whole genome shotgun sequence.
ACCESSION   DATIFF010001022 DATIFF010000000
VERSION     DATIFF010001022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5118
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2282027"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1288
                     /locus_tag="VLD58_14860"
     CDS             <1..1288
                     /locus_tag="VLD58_14860"
                     /inference="COORDINATES: protein motif:HMM:NF006596.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HSB55638.1"
                     /translation="AELIGINSTEEHGSTTPAAQAVARRLLAAGYPAADVQVVGPDSV
                     HMNVVARLRGTGARRPILLLAHLDVVEALREDWSLDPFTLTEQGGFFYGRGTSDIKDM
                     GAIFTAILLEFKRQGYVPDRDIILGLTTGEEGGPVNGVEWLLANRRDLIDAVYCINGD
                     GGDPLSHNGVPYARNVQASEKVYTDFQLEVHNPGGHSSLPMPDNAIYRLSAALTRLGA
                     YRFPARLNEVTRGYFDRAAASNPVNVARDMRLAARGNVPAINRLSLESPYFNALFRTT
                     CIATRLSGGHADNALPQLARATVNCRMLPDERPENVLATIRRVVADTAVVVSVISPAV
                     PSPASPLTPEIMEPVERITRAMWPGAAVIPSMETGATDGLLLRNAGMPVYGISGVPLD
                     VDDIRAHGRDERIRVEAFYAGVEFTERLLRALTGGN"
     gene            complement(1294..2295)
                     /locus_tag="VLD58_14865"
     CDS             complement(1294..2295)
                     /locus_tag="VLD58_14865"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB55639.1"
                     /translation="MNTSIVDNGVETEARELAEFQGQVVVLTGDRYEVERVIARGGMS
                     VVLLAFDRLEGKQVALKLLDPRQGASIENRERFRREAMISARLAHPHIVPCHDFHHRG
                     NLAMAVMRYIPGHSLGDLLPEGRRLPVDEVLRIVIAIADALAHTHAEGIVHRDVKPAN
                     ILLHDDGSWPFLTDFGIATLRTSEHSRSEVYKGFGTPAFMSPEQALGRWDADFRTDVY
                     SLGLVAYRALAGRLPFTAESAVALAAQRTIKNAPPIRSFAPEVPPILAAIIDRCLARD
                     PRKRWRSAATLRDALKRFRANPNGLSWLAGLFGKAPVASSLLGQAASWGAIGLWLRR"
     gene            2609..3712
                     /locus_tag="VLD58_14870"
     CDS             2609..3712
                     /locus_tag="VLD58_14870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P1 family peptidase"
                     /protein_id="HSB55640.1"
                     /translation="MVPLAAQQSAPAKPRARALGVAPGTLVPGPLNSITDVSGVLVGQ
                     STIRQGDSVRTGITAILPHGGDLFQDRVPAVIHVGNGFGKLLGVTQVKELGELETPIL
                     LTCTLCVWKVADALVTELLARPGMEEVRSINPVVGETNDGYVLNVIRRRLVTQQDVHN
                     ALAGATSGPVQEGSVGAGTGTIAFGWKGGIGTSSRRVTAADSSWTVGVLVQTNFGGDL
                     QILGVPVGRALGRRGVNKEGSAQGKKGSIMIVVATDAPLSTRNLERLASRAIIGLGRT
                     GSVGDNGSGDYVIAFSTNPGVRRTRGAPRLNAADLGNDEMSNLFEGVVEATEEAIYNS
                     LFVATTERANGYTVEALPVADVLRILKERGAVK"
     gene            complement(3838..>5118)
                     /locus_tag="VLD58_14875"
     CDS             complement(3838..>5118)
                     /locus_tag="VLD58_14875"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HSB55641.1"
                     /translation="YGGVFGDTTVSLGPDQVTGKLVVMQLPQNGGTRTLRAVGRRFPT
                     AAALAVIAPDQLLGFIRRPNTFVDDPAVQAAAPLPPTLFLTQAGAAKLFDGALAELAP
                     GAAGKSVNVDLKMLIAPVPFPARNVVAMIPGNDPALRGQYIAVGAHNDHIGMTGTPVD
                     HDSMRIFLHRVRPGGAENNNRQATPEQQAQVNADLAAWRAAHPNSQRPDSISNGADDD
                     GSGSVSVLEIAEKLQSMKKKLKRSVLFVWHVGEERGLLGSAWFTDHPTVARDSIVAQL
                     NMDMVGRGDAWDVTGAASDGTVLHGNPNYLQIVGSRRLSTELGDIIEKVNTDGKHNLV
                     FDYSMDANGHPMNIYCRSDHYEYARYGIPIAFFTTGGHSDYHQVTDEPMYIDYPHMTR
                     VDRLVADVAMRLANLDHRVVVDKEKPDPKGACRQ"
BASE COUNT          839 a         1748 c         1719 g          812 t
ORIGIN      
        1 cgccgagctg atcggaatca acagcaccga ggagcacggc agcaccacgc ccgccgcgca
       61 ggcggtggcg cggcggctgc tcgccgccgg gtaccccgca gccgacgtgc aggtggtcgg
      121 cccggacagc gtgcacatga atgtggtcgc gcggctccgc ggcaccggcg cccgccgccc
      181 catcctgctg ctggcacacc tcgacgtggt ggaagcgctg cgggaggact ggtcgctcga
      241 tccgttcacc ctgaccgagc agggcgggtt cttctacggc cggggcacca gcgacatcaa
      301 ggacatgggg gcgatcttca ccgccatcct gctcgagttc aagcgccagg gctatgtgcc
      361 cgaccgcgac atcatcctcg ggctcacgac cggtgaagag ggcgggccgg tcaacggggt
      421 cgagtggctg ctcgccaacc ggcgggatct catcgatgcg gtctactgca tcaacggcga
      481 cggcggcgat cccctctcgc acaacggcgt gccctacgcc cgcaacgtcc aggcgagcga
      541 gaaggtctac accgacttcc agctcgaggt gcacaatccc ggcggtcaca gttctctgcc
      601 aatgccggac aacgccatct accgtctctc ggcggccctg acccggctgg gagcgtaccg
      661 cttccccgcg cggctcaacg aggtcacccg gggctacttc gatcgggccg ccgccagcaa
      721 cccagtgaac gtcgcgcgcg acatgcggct cgccgcccgc ggcaacgtgc ccgccatcaa
      781 ccggctctcg ctcgagtcgc cctacttcaa cgccctcttc cggaccacct gcatcgccac
      841 ccggctgagc ggtggccacg ccgacaatgc cctgccccag ctcgcccggg cgacggtcaa
      901 ctgccggatg ctcccggatg agcggcccga gaatgtgctg gcaacgatcc ggcgcgtggt
      961 cgccgatacg gccgtcgtgg tcagcgtgat ttcgccggcg gttccgtcac ccgcctcgcc
     1021 tctgacaccg gaaatcatgg aaccggtcga gcggatcacc cgcgcgatgt ggcccggcgc
     1081 cgccgtgatc cccagcatgg agacaggggc caccgacggc ctcctgctcc gcaacgcagg
     1141 catgccggtc tacggaattt cgggagtgcc gctcgacgtc gacgatatcc gcgcccatgg
     1201 cagggacgag cggattcggg tggaggcgtt ctatgcggga gtggagttca ctgaacggct
     1261 gctgcgggcc ctgaccggag ggaactgaac cggctagcgc cggagccaga gtccgatcgc
     1321 gccccagctc gccgcctggc ccagcagcga cgacgccacc ggcgccttgc cgaagagccc
     1381 cgcgagccac gagagcccgt tgggattggc gcggaagcgc ttgagcgcat cgcggagtgt
     1441 cgcggccgaa cgccaccgct tgcgggggtc acgggccagg cagcggtcga tgatcgccgc
     1501 gaggatcggc ggaacctcgg gcgcgaagct gcggatcggg ggcgcgttct tgatggtgcg
     1561 ctgcgccgcc agcgccacgg cggactccgc cgtgaacggc agccggcccg cgagcgcccg
     1621 gtacgccacc agccccagcg aatagacatc ggtgcggaag tcggcgtccc agcggcccag
     1681 cgcctgttcc ggcgacatga acgccggggt gccgaaaccc ttgtagacct cggagcggga
     1741 gtgctcggag gtgcgcaggg tggcgatgcc gaagtcggtc aggaacggcc agctgccgtc
     1801 atcgtgcagc aggatgttcg ccggcttcac gtcgcggtgc acgatccctt cggcgtgggt
     1861 atgcgccagg gcatcggcga tggcgatgac gatccgcagc acctcatcga ccggcagccg
     1921 gcggccctcc ggcaacaggt ctcccagcga gtgccccggg atgtagcgca tcaccgccat
     1981 cgccaggttg ccgcgatggt ggaagtcgtg acagggaacg atgtggggat gggccagccg
     2041 ggcggagatc atcgcctcgc ggcggaaccg ctcgcggttc tcgatcgaag cgccctgccg
     2101 gggatccagc agcttgaggg cgacctgctt cccctccagc cggtcgaacg cgagcaggac
     2161 cacgctcatc ccgccccgcg cgatcacccg ctccacctca taccggtctc ccgtgagcac
     2221 aacgacctgt ccctggaact cggcgagttc ccgggcctcg gtctcaacgc cgttgtcgac
     2281 gatgctcgtg ttcatgggat taccagtggt ggacaggtcc cgaaaaggca cgtcccgtgc
     2341 cgctcaaccg acaagatttc ttgttgcgtg acaacgactt acgtgacttc ctcagaccct
     2401 tgccgatcaa ttccgggatt gttcatccca aaagcggaca cccaggacaa ccggcaattc
     2461 ctcgattcaa cactgagtaa gacacctgag aagcgtgaag ggttgcgatc ggttacgacc
     2521 tcgtgaccat atattctctc gaccccacgc cccggacttt tgcgtgcctc tccgccgcac
     2581 cgcactcctt ctcgcaggtc tgtcgttcgt ggttccgctt gcggcccagc agtcggcgcc
     2641 tgcaaaaccg cgggccagag ccctcggtgt ggcacccggg acgctcgtcc ccggcccact
     2701 caacagcatt acggatgtgt ccggcgtttt ggtggggcag tccacgatcc ggcagggcga
     2761 ctcggtccgg accgggatca ccgccatcct gcctcacggc ggcgacctct ttcaggaccg
     2821 ggtgcccgcg gtgattcacg tcggcaacgg cttcggcaag ctgctcggcg tgacccaggt
     2881 gaaggagctg ggcgagctgg agacgccgat cctgctgacc tgcacgctct gtgtctggaa
     2941 ggtggccgat gcgctggtga ccgagctgct ggcccggcca ggcatggagg aagtccgctc
     3001 gatcaacccg gtggtgggcg agaccaacga cggctatgtg ctcaacgtca tccgccggcg
     3061 gctcgtcacc cagcaggacg tgcacaacgc gctggccggg gcgaccagcg ggccggtgca
     3121 ggaggggagc gtcggcgccg gcaccggcac catcgcgttc ggatggaaag gcgggatcgg
     3181 cacctcatcg cgccgggtca ccgcggccga cagcagctgg acggtgggcg tgctggtcca
     3241 gaccaacttc ggtggcgacc tccagattct cggcgtgccg gtcgggcggg cgctcgggcg
     3301 gcgaggggtg aacaaggaag gatcggcgca ggggaagaag gggtcgatca tgatcgtggt
     3361 ggcgaccgac gcgccgctct cgacccgcaa tctcgagcgc ctcgcctccc gcgccatcat
     3421 cgggcttggc cgcaccgggt cggtgggtga caacggctcg ggcgactacg tcattgcctt
     3481 ctccaccaac ccaggggtgc ggcggacacg cggagcacca cgcctcaacg ccgcggatct
     3541 cggcaacgac gagatgtcga acctgttcga gggtgtggtc gaggcgaccg aggaggcgat
     3601 ctacaactcg ttgttcgtgg ctactaccga gcgggccaac gggtacaccg tcgaggcgct
     3661 gccggtggcg gacgtgctca ggatactgaa ggagagaggg gcggtgaagt aggcggccaa
     3721 gcggcaaggc ggcacggcgg tcagtggata gagaatgggt gggatccgag aggaccccac
     3781 ccattcttgt ctgctgctgg ccgctttgcc gctttgccgc ctggccgcct ggccgcccta
     3841 ctgacggcac gcccccttgg gatccggctt ctccttgtcc accaccaccc ggtggtccag
     3901 gttcgcgagc cgcatcgcca cgtccgccac cagccggtcc actctggtca tgtggggata
     3961 gtcgatatac atcggctcgt ccgtcacctg gtggtaatcg gagtgcccgc cggtagtgaa
     4021 gaacgcgatc gggatgccgt accgggcgta ctcgtagtga tcgctccggc agtagatgtt
     4081 catcgggtgc ccgttggcat ccatggaata gtcgaacacc aggttgtgct tgccatcggt
     4141 gttcaccttc tcgatgatgt cgcccagctc ggtggaaagc cggcgggacc cgacgatctg
     4201 gagatagttg gggttgccgt gaagcactgt gccgtcgctg gccgcgccgg tgacatccca
     4261 ggcgtcgccc cggcccacca tatccatgtt gagctgcgcc acgatcgagt cgcgcgccac
     4321 cgtggggtgg tcggtgaacc acgccgagcc gaggaggccg cgctcttccc cgacgtgcca
     4381 gacgaacagc accgaccgct tgagcttctt cttcatcgac tgaagcttct ccgcgatctc
     4441 cagcacactc accgagccgg acccatcgtc atccgccccg ttgctgatcg aatcggggcg
     4501 ctggctgttg ggatgcgccg cccgccaggc cgcgaggtcg gcgttgacct gggcctgctg
     4561 ctcgggcgtc gcctgccggt tgttgttctc cgcccccccg ggccgcaccc ggtggaggaa
     4621 gatccgcatc gagtcgtgat ccaccggcgt accggtcatc ccgatgtgat cgttgtgagc
     4681 cccgacggcg atgtactgcc ccctgagcgc cggatcattc cccgggatca tcgcgaccac
     4741 gttccgggcc gggaacggca ccggcgcgat gagcatcttg agatccacgt tcaccgactt
     4801 gccggcggca cccggcgcga gctctgccag cgcaccgtcg aacagcttgg cggcacccgc
     4861 ctgggtaagg aagagggtcg gcggcagcgg ggccgcggcc tgcaccgcgg gatcatcgac
     4921 gaaggtattc ggccggcgga tgaacccgag cagctggtcc ggcgcgatca ccgccagcgc
     4981 ggccgcggtc ggaaagcgcc ggcccacggc acggagcgtc cgggtcccac cattctgcgg
     5041 caattgcatc actacgagct tgccggtgac ctggtcgggg ccgagactga cggtggtatc
     5101 accgaagaca ccaccgta
//
LOCUS       DATIFF010001023         4075 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_895857, whole genome shotgun sequence.
ACCESSION   DATIFF010001023 DATIFF010000000
VERSION     DATIFF010001023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4075
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_895857"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1263)
                     /locus_tag="VLD58_14880"
     CDS             complement(<1..1263)
                     /locus_tag="VLD58_14880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55642.1"
                     /translation="MTAQSDRRAGLYAVVAAGLTVAFQLAGKATRDALFLSTFGVAAL
                     PRMLIASAIVSVAFTLGLTRVMARTGPGRLVPRLFWLSGLLLLGEWALSGPARPAAAI
                     LFYLHFGGLGALLVSGFWALVNERFDPRSARGAIGRITTGASLGGLVGGILPERIGAT
                     LSLTTMLPVLALLHILAGILVLWLRRVTTPQEPSVRRSGAASRSPREIFFASPYLQGI
                     ALLVVLTATAEGLLDYVFKAGATAAVSNDTELLRLFAAFYTGTAVLTILVQLLVLRPV
                     MASIGIARSAALLPGGTSIATAGALLLPGFGPLIVARAVEIVLHNSIFRAAYELLYTP
                     VSPQEKRSTKLVLDVAVARVGDVLAGALVQAALILGLAATAPLLGAGMLLAAGALYVA
                     RRLHFGYVGALEQNLHRRAADLPLASDDP"
     gene            complement(1326..3872)
                     /locus_tag="VLD58_14885"
     CDS             complement(1326..3872)
                     /locus_tag="VLD58_14885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55643.1"
                     /translation="MITRTRRLLALILLGGALAAAPLDAQTRDSLTRVTAGPQYDAGG
                     LYRFLFGAGYREIWTRPFQAPVLDLATFAGGLTPVNRTGGQQTRALRFRGADGHEFFF
                     RSLDKDPSSVLPPDLRGTVAASVVQDQTKSALPTAPPVVSRLLKAAGIPHANPRIVVL
                     PDDPALGEFRPVFAGLVGTLEERVGGSGLAEHFADAVEIIGTDSLITLLGRSTRDRVD
                     ATAYLKARLFDVMIGDWDRHRDQWRWARFDSSEPRRWRPIPLDRDQAFARYDGLLLGI
                     ARQAGTAQLTNYGPSYPGMTGATWNGRDMDRRFLVGLSRSDWDSVARDLRFAMSDSAI
                     RDAVRALPPEHYNIIGVTLSDWIRLRRDQLPDAARAFYSHLAGQVDVHATGGADRAIV
                     RRTRDGELDLEVTAEGDSLPYLVRHFKSDETSDLRLFLGDGADTAKVTGTGSGITVRV
                     LGEAGSDVLIDSTRSGKNRFYDDPDGLSKTSGIAQHVERKPYHPPRTANPKSPPPRDW
                     GTRWQANIWASAGPDIGLFFGGGQTFTTYGFRKVPFSSRHKVRVGFATGPSAFRAEYR
                     GEWQRENSGTRLELLARGSGIEVIRFHGFGNEIAADRGDEFYRVTQQQYLLAPGVLFQ
                     LAPKLSLTVGPEAKLVHTDNRRNRFLATIDPYGDGTFGELGASADLVFDGRNRNSAAT
                     HGGRIAIGGTVRPPWWDVKETFGDVHGEATAFLSPKMPLDPTLSFRVGGRKVWGAFPY
                     FEAAFIGDRNTVRLGRENRFAGDASAYGSSELRLQLFRASIVVPTDVGIFGLADAGRV
                     WLDGESSDKWHTAFGGGLWLGFLSPANTLSAAIAASDERTRLYLQAGFGF"
     gene            complement(3869..>4075)
                     /locus_tag="VLD58_14890"
     CDS             complement(3869..>4075)
                     /locus_tag="VLD58_14890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55644.1"
                     /translation="KAKQAIDSFFVRAGDVLSALLIYVGTTQLAFGPSQFARVNLALA
                     LVWLGLAFLVGRAYVRKTTPGAAA"
BASE COUNT          701 a         1378 c         1467 g          529 t
ORIGIN      
        1 cggatcgtcg gaggcgagcg gcaggtcggc cgcacggcgg tggagattct gttccagcgc
       61 gcccacgtaa ccgaagtgca gccggcgggc gacgtacagc gcgcccgccg cgagcagcat
      121 gcccgcaccc agaagcggcg ccgtcgccgc caatccgaga atcagcgcgg cctgcaccag
      181 ggcgccggcc agcacgtcgc ccacccgtgc cacggccaca tcaagcacca gcttggtgga
      241 gcgcttctcc tggggggaga cgggagtgta gagcagctcg tacgccgcgc ggaagatcga
      301 gttgtggagc acgatctcga cggcgcgcgc cacgatcagc ggcccgaacc ccggaagcag
      361 cagcgccccg gccgtggcga tcgaggtccc tcccggcagg agcgccgcgc tccgcgcgat
      421 gccgatgctg gccatgaccg ggcggagcac caggagctgc accaggatgg tgagcaccgc
      481 ggtcccggtg tagaacgccg cgaagagccg aagcaactcg gtgtcattgc tgactgccgc
      541 cgtcgcgccg gccttgaaga cgtagtcgag cagcccttcc gccgtcgcgg tgagcacgac
      601 cagcagggcg atgccctgga gatagggcga cgcgaagaag atctcgcgcg gcgagcggct
      661 ggctgcgccc gagcgcctga ccgaaggttc ctgtggcgtg gtgacccggc ggagccagag
      721 caccaggatc ccggcgagga tgtggagcag cgccagcacc ggcagcatcg tggtgaggct
      781 gagcgtggcc ccgatccgct ccgggaggat gccgccgacc agcccgccca gtgacgcgcc
      841 ggtggtgatc cggccaatcg cgccccgggc ggaacggggg tcgaatcgtt cgttgacgag
      901 cgcccagaag ccggacacca gcagggcgcc cagtccaccg aaatggagat agaagagaat
      961 cgcggcggcg ggacgggccg ggcccgaaag ggcccactcg ccgagcagca gcaggccgct
     1021 caaccagaag agccgcggca ccaggcggcc cgggccggtc cgggccatga cccgggtaag
     1081 accgagagtg aatgcgacgg atacgatcgc ggacgcgatc agcatccggg ggagggccgc
     1141 gaccccgaaa gtggagagga agagggcgtc gcgtgtggcc ttcccggcga gctgaaaggc
     1201 cacggtgaga cccgcagcaa ctaccgcgta gagcccggcc cggcgatccg attgtgccgt
     1261 catgggccta agctagcgtg agtcggagga gaacggccaa tgctccggcc aagagcctcg
     1321 cgcccctaga acccgaatcc ggcctggaga tacaaccgag tccgctcgtc gctcgcggca
     1381 atcgcggcgg agagggtgtt ggccgggctg aggaagccca gccagagccc gccgccaaag
     1441 gcggtgtgcc acttgtccga agactcgccg tcgagccaga cccggcccgc gtcggccagc
     1501 ccgaagattc cgacgtccgt cgggaccacg atggaggcac ggaagagttg cagccggagc
     1561 tccgacgagc cataggccga cgcatccccg gcaaagcgat tctcccgtcc cagccgcacc
     1621 gtgttgcggt cgccgatgaa ggcggcctcg aaatagggga aggcgcccca caccttgcgg
     1681 ccaccgaccc ggaacgagag ggtcgggtcg agcggcatct tcgggctcag gaaggccgtg
     1741 gcttccccat gcacgtcgcc gaacgtctcc ttcacgtccc accacggcgg ccggaccgtg
     1801 ccgccgatgg caatcctccc gccgtgcgtg gccgcgctgt tccggttgcg gccatcgaag
     1861 accaggtcgg cgctggcacc gagttcaccg aaggttccgt caccatacgg atcgatggtc
     1921 gcgaggaaac ggttccggcg gttgtcggtg tggaccagct tggcctcggg accgaccgtc
     1981 agcgagagct tcggcgccag ctggaacagc acgcccggcg cgagcagata ctgctgctgg
     2041 gtgacgcggt agaactcgtc gccccggtcg gcggctatct cgttgccgaa cccatggaaa
     2101 cggatcacct cgatgcccga cccgcgggcc aggagctcga ggcgggttcc gctgttttcc
     2161 cgctgccact cgccccggta ctccgcccgg aaggccgacg gcccggtcgc gaacccgacc
     2221 cgcaccttgt ggcgcgagga gaacggcacc ttgcggaagc cgtaggtcgt gaacgtctgg
     2281 ccgccaccga agaagagccc gatgtcaggg cccgcactcg cccagatatt ggcctgccag
     2341 cgggtgcccc agtcgcgcgg cgggggtgac ttgggattgg ccgtacgcgg cggatggtac
     2401 ggcttccgtt cgacatgctg cgcaatgccg gaagtcttcg agagcccgtc gggatcgtcg
     2461 tagaagcggt tcttcccgct ccgggtcgag tcgatcagga catcgctccc ggcttcaccg
     2521 agcacccgga ccgtgatgcc gctcccggtc ccggtcacct tcgcggtatc ggctccgtcg
     2581 cccaggaaga gccggagatc cgaggtctca tccgacttga agtggcgcac caggtacggc
     2641 aacgaatcgc cctcggcggt gacctcgagg tcgagctcgc catcccgggt gcgccggacg
     2701 atcgcacgat cggcaccgcc ggtggcgtgc acgtcgacct gccccgcgag gtgggagtag
     2761 aaggcccgcg cggcatcggg cagctggtcg cgccggagcc ggatccagtc gctgagcgtc
     2821 accccgatga tgttgtagtg ctccggcggg agcgcccgca ccgcatcgcg gatcgcgctg
     2881 tcgctcatcg caaagcggag gtcgcgggcc acggaatccc agtcgctccg ggagaggccc
     2941 accaggaagc gccggtccat gtcccgcccg ttccaggtgg cgccggtcat tcccggatag
     3001 gacgggccat agttggtgag ctgcgcggtg cccgcctggc gggcgatgcc gagcagcagc
     3061 ccgtcgtagc gcgcaaaggc ctggtcgcgg tcgagcggga tcgggcgcca gcgccggggc
     3121 tcgctgctgt cgaagcgggc ccagcgccac tggtcgcggt gccggtccca gtcgccgatc
     3181 atcacgtcga agagccgggc cttgagatag gcagtggcat cgacgcggtc gcgggtcgaa
     3241 cggcccagca gggtgatgag gctgtcggtg ccgatgatct cgacggcatc ggcaaagtgc
     3301 tccgccagcc cgctgccgcc gacccgctcc tcgagggtgc ccaccagtcc cgcaaagacc
     3361 ggccggaact ctcccagcgc gggatcatcg ggaaggacga cgatccgggg attggcatgg
     3421 ggaatccccg ctgccttgag gagccggctc acgaccggcg gcgcggtggg gagggccgac
     3481 ttggtctggt cctgcaccac gctggccgcc acggtgcccc ggagatcggg aggcagcacg
     3541 ctcgaaggat ccttgtcgag cgagcggaag aagaactcgt ggccatcggc cccgcggaag
     3601 cggagcgccc gggtctgctg gccgccggtg cggttcaccg gcgtgagccc acccgcgaag
     3661 gtggcgaggt cgagcaccgg cgcctggaac ggccgggtcc agatctcgcg atagcccgcg
     3721 ccaaagagaa agcggtagag ccctccggca tcgtactgcg ggcccgccgt cacccgcgtg
     3781 aggctgtccc tggtctgcgc gtccagcgga gccgccgcga gcgcgccacc caggaggatg
     3841 agcgcgagga gccgccgagt gcgagtgatc atgcggcagc tccgggagtg gtcttgcgga
     3901 cgtacgcccg gcccaccagg aacgcgaggc caagccatac gagggccagc gccaggttga
     3961 cccgggcgaa ctgggaggga ccgaaggcga gctgggtcgt ccccacgtag atgaggagtg
     4021 ccgagagcac gtcaccggcc cgcacgaaga aggaatcgat cgcctgcttg gcctt
//
LOCUS       DATIFF010001024         1100 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_590076, whole genome shotgun sequence.
ACCESSION   DATIFF010001024 DATIFF010000000
VERSION     DATIFF010001024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_590076"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(51..518)
                     /locus_tag="VLD58_14895"
     CDS             complement(51..518)
                     /locus_tag="VLD58_14895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55645.1"
                     /translation="MYRTITEIRRKNREAGQHFFDPATIRFFNSTIGRKIYGGRFFIT
                     GERFEDSPEFPRRYTIRIADDAGHIHDASEFQEFSSHDEAEARAEYLASKADTISVSR
                     FDAPLIEDCIKPAGSRNWSEAPAEDRTDDGELIPPEQQAWNERHQDELNPESK"
     gene            complement(614..949)
                     /locus_tag="VLD58_14900"
     CDS             complement(614..949)
                     /locus_tag="VLD58_14900"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024783.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease signature motif containing
                     protein"
                     /protein_id="HSB55646.1"
                     /translation="MKRTPLVRRTPLARESSSARRLRRIWNLRRKGEDRCRVCGRRAD
                     ALHHAVPRSLAPAGREDLRNGLPLCRDHHDGWHGGTPIPRVVFKPEEWAFIEQIAPGI
                     GWLGRRYPR"
BASE COUNT          140 a          359 c          398 g          203 t
ORIGIN      
        1 tgcttctgct tctgcttggt cgtcatcggt tgacctcctg gtcgtggtgg ttacttgctc
       61 tcggggttca gctcgtcctg gtgccgctcg ttccacgcct gttgctcggg cgggatcagc
      121 tcgccgtcgt cggtcctgtc ctcggccggc gcctcgctcc agttgcggga gccggcgggc
      181 ttgatgcagt cctcgatcag cggcgcgtcg aagcggctga ccgagatcgt gtcggccttg
      241 ctcgccagat actcggcgcg ggcctcggcc tcgtcgtgcg agctgaactc ctggaactcg
      301 ctcgcgtcgt ggatgtggcc ggcgtcgtcc gcgatgcgga tggtgtagcg ccgggggaac
      361 tccggggagt cctcgaagcg ctcgccggtg atgaagaagc ggccgccgta gatcttgcgg
      421 ccgatggtgc tgttgaagaa ccggatggtg gccgggtcga agaagtgctg cccggcctcg
      481 cggttcttcc ggcggatctc ggtgatggtc ctgtacatgg gtgcctcctg gtcggcggtt
      541 gaactcatga catacagaat acagggcatc cgccccggat acaagggccg atattcggga
      601 tgaacagagg gatctagcgg gggtagcggc ggccgagcca gccgatgccg ggggcgatct
      661 gctcgatgaa ggcccactcc tcgggcttga agaccacccg cgggatcggg gtgccgccgt
      721 gccagccgtc gtggtggtcc cggcagagcg gcaggccgtt ccgcaggtcc tcccggccag
      781 ccggcgccag ggatcggggc accgcatgat ggagggcatc cgctcgccgg ccgcagaccc
      841 ggcagcggtc ctcgcccttc cggcgcaggt tccagatccg ccgcagccgc cgggccgagg
      901 acgactctcg agctaggggt gtgcgccgga ccaggggcgt ccgcttcatg gcctgccgcc
      961 gatgatcggg ccgtcgggct cggaggtctg gccgtagccc tcggccagct cgcgcttcat
     1021 cgaccactcc gcgaagcgca ggacatcctt ccggttggcg gtgtgccgcc agagcgcccc
     1081 cgacatggcc tcgcgcttgc
//
LOCUS       DATIFF010001025         2486 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1514200, whole genome shotgun sequence.
ACCESSION   DATIFF010001025 DATIFF010000000
VERSION     DATIFF010001025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2486
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1514200"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1295
                     /locus_tag="VLD58_14905"
     CDS             <1..1295
                     /locus_tag="VLD58_14905"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HSB55647.1"
                     /translation="LKLLPHMHPSYRRIAPLILAVLLARPAQAQTVVDPVSLLSDVKY
                     LSSDSLGGRLIGTPGADSAAAYLARRFKQSGLRPAPQGWFQPFTVSPTAPAAVHAGIG
                     GAVGKNVIGVLPGKDPVLRNEIVIVGAHYDHLGPGNFGSLDPDSTGQIHNGADDNASG
                     ASALIHIAKKLRQTPPGRTIVFIAFSGEEAGLLGSDYYVKNPIFPLSRTYAMINMDMV
                     GRLRNDRLLVYGVATAKELGWLLDSLNAEARFDLKASGDGWGRSDQSSFYGAGLPVLH
                     LFTDLHEDYHRTTDDWEKINADGLAKVADFTASIVRALGNRREGLTFVNVPPPTLSAS
                     STSSSSGYGAYLGTVPDMSDSPGGVRLTGVRAGSPAEKAGLKGNDIIVQIGETKVPDL
                     QGMTNALRAHKPGDVVEIRILRDGAEQRVQVTLGTRGN"
     gene            1295..1750
                     /locus_tag="VLD58_14910"
     CDS             1295..1750
                     /locus_tag="VLD58_14910"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSB55648.1"
                     /translation="MPVLNAQPIMAGLRGLFAKDAGRQQLLSYAAERIRAAGAPYTSV
                     YLYMLHGDDLVLEAFSGRETEHTHIKVGHGVCGTAVATGQDQNVPDVRAISNYIACNT
                     FTRSELVVLIRRGQTILGQIDVDSDVPDPFSPEEEQAVREVADALAVLL"
     gene            1762..>2486
                     /locus_tag="VLD58_14915"
     CDS             1762..>2486
                     /locus_tag="VLD58_14915"
                     /inference="COORDINATES: protein motif:HMM:NF013046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase"
                     /protein_id="HSB55649.1"
                     /translation="MRAWSSARFGVPLPPGHRFPIEKYALVRDLVVRRGLLPPESIEE
                     PERARREDLALVHHPTYLDAIDHGTLDPVATRRLGFPWSADLRERSYRTVQGTVDAAR
                     DAVTRGAGVNLAGGTHHAFADRGEGFCVFNDVAVAVRVLQRDGLLRRAVVIDLDVHQG
                     NGTARIFAGDESVFTFSLHGEKNYPFHKEVSRLDVGLPDGCDDHTYLDALARHLDAVL
                     DQAGAELAFYLAGADPYEGDRFGR"
BASE COUNT          395 a          909 c          797 g          385 t
ORIGIN      
        1 cacttaagct tctcccccat atgcacccct cgtaccgccg cattgcaccc ctgattctgg
       61 ctgtgctcct cgccagaccc gcccaggccc agaccgtggt ggacccggtc tcgctcctga
      121 gcgacgtgaa gtacctctcg agcgacagcc tgggtggccg cctgattggc acacccggtg
      181 ccgacagtgc cgccgcctac ctcgcgcgcc gcttcaagca gtcgggcctc cgccccgcgc
      241 cgcagggctg gttccagccg ttcaccgtct cccccaccgc cccggccgcg gtgcacgccg
      301 gcatcggcgg cgccgtcggc aagaacgtga tcggggtgct gcccgggaag gacccggtgc
      361 tccgcaacga gatcgtgatc gtcggggccc actacgatca cctcggccca ggcaacttcg
      421 gctcgctcga tccggacagc accggccaga tccacaacgg cgccgacgac aatgcgtcgg
      481 gtgcgagcgc cctgatccac atcgccaaga agctgcgcca gactcccccc ggacgcacca
      541 ttgtcttcat cgccttcagc ggcgaagaag ccgggctcct cggctccgac tactacgtca
      601 agaacccgat cttcccgctc tcccgcacct atgccatgat caacatggac atggtggggc
      661 ggctccggaa cgaccggctc ctggtgtacg gcgtggcgac cgccaaggag cttggctggc
      721 tgctcgattc gctcaacgcc gaggcgcggt tcgatctcaa ggcgtcgggt gacgggtggg
      781 ggcggagcga tcagtcgtca ttctacggtg cggggctccc ggtgctgcat ctcttcaccg
      841 acctgcacga ggactatcat cgcaccaccg acgactggga gaagatcaac gccgatggcc
      901 tcgccaaggt cgccgatttc accgcctcga tcgtgcgggc cctgggaaac cggcgcgagg
      961 ggctgacctt cgtgaatgtt ccgccgccca cgctcagcgc ctcgtccacg tcctcctcct
     1021 cgggctacgg cgcctacctc ggcacggtgc cggacatgtc ggacagtccc ggcggggtgc
     1081 gtctcaccgg ggtgcgagcc gggagcccgg ccgaaaaggc cgggctcaag gggaacgaca
     1141 tcatcgtgca gatcggcgag acgaaggtcc ccgatctcca gggcatgacc aacgcgctcc
     1201 gggcccacaa acccggcgac gtggtggaga tccggatcct ccgcgatggc gcggagcagc
     1261 gagtgcaggt gactctcgga accagaggga actgatgccg gtgctcaacg cccagccgat
     1321 catggccgga ctccgcggac tcttcgccaa ggatgccggc cgccagcagc tgctcagcta
     1381 cgccgcggag cggatccgcg ccgccggagc gccgtacacc tcggtgtacc tctacatgct
     1441 ccacggcgat gacctggtcc tggaggcctt cagcggccgg gagaccgagc acacccacat
     1501 caaggtgggg catggcgtct gcgggaccgc ggtcgctacc ggccaggatc agaatgtccc
     1561 cgacgtgcgc gccatctcga attacatcgc ctgcaacacc ttcacccgct cggagctggt
     1621 ggtgctgatc cgccggggcc agaccattct gggacagatc gacgtcgaca gcgacgtccc
     1681 cgatcccttc tcccccgagg aagagcaggc ggtgcgcgag gtggccgacg cgctggcggt
     1741 cctcctctga ccgcctgacc cgtgagagcc tggtcgtccg cacgcttcgg cgtgccgctg
     1801 ccgccgggcc atcgctttcc catcgagaag tacgccctgg tccgtgacct cgtggtgcgt
     1861 cgcgggctcc ttcccccgga aagcatcgaa gagccggagc gcgcccgccg cgaggatctc
     1921 gcgctggtgc accacccgac gtatctcgac gcgatcgacc acggaaccct cgatccggtg
     1981 gccacccgcc ggctcggctt tccctggagc gccgacctcc gggagcgctc ctaccgcacc
     2041 gtgcagggca cggtcgacgc ggcccgcgac gcggtgaccc gtggcgccgg cgtgaacctg
     2101 gcgggcggca cgcaccacgc cttcgccgac cggggcgaag gcttctgcgt cttcaacgac
     2161 gtggcggtcg ccgtccgggt gctgcagcgt gatggcctcc tccggcgcgc cgtggtgatc
     2221 gatctcgacg tacaccaggg caacgggacc gcacggatct tcgcgggcga cgaatcggtc
     2281 ttcaccttct cgctgcatgg cgagaagaac tacccctttc acaaggaagt gagccggctc
     2341 gacgtgggcc tcccggacgg ctgcgacgac cacacctatc tcgacgcgct ggcccggcac
     2401 ctcgacgccg tgctggatca ggccggggcg gagctcgcgt tctacctggc gggggccgat
     2461 ccctacgaag gcgatcgctt cggccg
//
LOCUS       DATIFF010001026         7850 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_284495, whole genome shotgun sequence.
ACCESSION   DATIFF010001026 DATIFF010000000
VERSION     DATIFF010001026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7850
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_284495"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(137..3478)
                     /gene="mfd"
                     /locus_tag="VLD58_14920"
     CDS             complement(137..3478)
                     /gene="mfd"
                     /locus_tag="VLD58_14920"
                     /inference="COORDINATES: protein motif:HMM:TIGR00580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HSB55650.1"
                     /translation="MTLKLLLDAFERTPIAFDLKDRLPQRGQQLAIAGLAGSSPSVLA
                     AWLVRSFPGRLLTIVATTPADAERWLTDLGHLTDDAVALYPQREALGEEEPHYEIAGE
                     RAETLAALLEGRLRILVTTARACQERTRVPARLKDSTLRIGTGVKPRASEAKGARTLS
                     GVVAALEAMGYEKVPIVTEVAEFSVRGGIVDVYGFGMATPARLEWWGDDLESIRAFDL
                     TSQRSGDSIDELTILPIRSLSAAADEPAVGDGERQSLLELLPSDTLILEDVPHANGEE
                     VTRSWREAAHHLEVARRLGEEVSARDDLFEAPETWSRRIAAFPRLAVRAETGDLNAGF
                     FPPERIERDLRRLRSMLSADQPTLILCDNEGQLERLDELLSEGSGRANATLAIGALDG
                     GFVMRSLRVLTDHEIFRRARRIRRSRRYRQAATGAATGQLQAGDYVVHLDHGIGIYRG
                     IATIQVGEAILEVAIVEYEGGDRLNVPLYRLDQLERYRAAGEDGDQPPPRLHKLGGNS
                     WQKVRDKTRQAIKEMASELLDLYARRKVSAGYAFPPDTKWQRELESSFLYEDTPDQRK
                     ATEAVKKAMEQPIPMDLLLVGDVGYGKTEVAVRAAFKAVQGGKQVAVLVPTTILADQH
                     ARTFTERLADFPVKIEVLSRFRTAKEQKLALERLVAGETDIIIGTHRLLSPDVTFKEL
                     GLLVVDEEHRFGVKHKERLKTLRLTVDVLTLTATPIPRTLHLSLAGLRDLVLIETPPR
                     DRSPILTFVEPWDDGLLDEAFARELDRGGQVFVVHNRIETIETIAARVRSLAPRAQVA
                     VGHGQMAGDELEEVMRRFVSNEVQILVSTMIVESGLDVPNANTMVVHDAHRFGLAQLY
                     QLRGRVGRSHRRAYCYLLVPDLIDQDAEERLRVLEHHTELGAGYRIALKDLELRGAGN
                     LLGAEQSGHAHAVGFDLYLRWLEETVKALRGQGKGERPQPPEVVLDKPATLSDSYVAD
                     DAVKLDFYRRLARAATSSDIEPLRDELRERFGPLPESAEQLLDMARLRVIGAELGLQH
                     LLVRGDEARLTFREGAVPRFAGLSAALDHVQLAVDVRRTVPLSLRLTRLGGQALVPAL
                     VRALAAVAEKQGGKTTQDSTGRQEM"
     gene            complement(3475..5259)
                     /locus_tag="VLD58_14925"
     CDS             complement(3475..5259)
                     /locus_tag="VLD58_14925"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BatA and WFA domain-containing protein"
                     /protein_id="HSB55651.1"
                     /translation="MGFLAPWVLAALPLALVPVVLHLIQRRDPPTVEFPAVRYLVQVT
                     QEHQRRLKLRHLLLLILRTLLIIALIVAAAGPSAPLKQASSHSPSALVVVLDDSPSSG
                     VVVSGTPRLNELRAAANRVLAQATPSDALWLLTSDGVARRGSPDALRHAVDSLQPTSR
                     RMDLGQALALAGEVLRTDRRPGGIVLLSDLQASALSPARSTVPLLVARPERNVPVNQG
                     IAGVDAGAQPWTPEGGAVTVRIEGDTTAPAPVSVALRDRPARQALVPSGGAVSFTLGP
                     AVPGWWTVRASKAPDELRADDDRLALVRVAPVAQVAWDPADRYLAAASEVLLASGRIR
                     RGTEISLGTLGNGPSIVAPPADPAALGAVNRALERRGLGWRYGTLSETPTVTDSGPLL
                     GRVAIGKRYLLQPARPSAAPGVLVTAGGTPWLVRDGNVLLIGSRFDPSWTALPLGAGF
                     MPLMDAMVNRLARGQVASLTGTPGDPVLLPDLVTEVVQGERRWRVEGGAAFRPPEPGA
                     YFLLAGKDTVGGLAVALDPRESLLSPASDGAVTGLWPGARVVPLADAAGAAFAGAGRA
                     SLVGPLLWLVLALGLMEVALASGVRRST"
     gene            complement(5259..6182)
                     /locus_tag="VLD58_14930"
     CDS             complement(5259..6182)
                     /locus_tag="VLD58_14930"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HSB55652.1"
                     /translation="MSIPAPSAHPRLDLLDPREASRLAGLELLTEGVVEGFLAGLHRS
                     PRRGFSVEFAEHRMYQPGDELRYVDWKLLGRKDRLYVKQYEEETNLRAMLVTDVSRSM
                     AWSGNPDLVLPKLAYLKQLTAALAMLLLRQRDATGLIAFDEGIRSIVPARARTSHWYQ
                     LLDTLRGLTPGQGTAAEPALRRVVDLLRRRGLVIFISDLLLDRELALRALKFLKHRGH
                     QVIVLHIMDPAELDLGGPAEARFEDPETGSGVTLRPKDWAEAYKETVQGVVAAWRRAC
                     RTSGMQYHQITTDTPFGHALRRVVARPAGIA"
     gene            6386..>7850
                     /locus_tag="VLD58_14935"
     CDS             6386..>7850
                     /locus_tag="VLD58_14935"
                     /inference="COORDINATES: protein motif:HMM:NF025684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4384 domain-containing protein"
                     /protein_id="HSB55653.1"
                     /translation="MSATLSLVLAALTATPLASREPAPAQPTSLIATWIRAQSEDRPR
                     VSVWVNRDDPYQRGDDARVYFKSDRDAYVTVIRIDTDGRMRVLFPIDPWEDNFARGGR
                     TFEVLGRDRDEAFRVDDYPGVGYIFAIASPDEFRYDDLVRGDHWDYRTISDGRVRGDP
                     YVAVSDLADRIAQEDDYDYDVTSYDVERHYDYPRFVCYDCHTYASWHYWDPYSSYCSR
                     FQIVIYDDWYYYPYRRYRGGVYVGRPYRPGPRYVFKDYDKRNDYITRVAERPRGGDPV
                     RRTSADVGGRGSIPTPVSPRRRTDDGNRGAEPGRAPSNDPRRRTEGGNRPDANRPDAS
                     PSQEPRRRTDDNGNRPEAGRPDQGSGQEPRRRGTDNGGRPENPAPDRQPSNQLREDRP
                     ERRTIEDRPSRDDGASSERRGRRSRDDGSNPGLSEPRVAPDRARPNEPRFAPDRARPS
                     EPRATTREPRREPRSQPRAEPRSEPRSAPRSEPRQSPP"
BASE COUNT         1229 a         2907 c         2595 g         1119 t
ORIGIN      
        1 atcagcgacg ccagccgctc ggtcttgagt tcctggcccc ccgcttcggc cgcgatctcg
       61 ggccgggccc ggaaagcgtc ccggcatccg gccagcgcga gcagtgtcac agtagttccc
      121 accaaccagc gtcgcatcac atctcctgtc ttccggttga gtcctgcgtg gtcttcccgc
      181 cctgcttctc cgccaccgcg gccagcgccc gcaccagcgc cggcaccagc gcctgtccgc
      241 ccagccgggt caggcggagc gagagcggca ccgtgcggcg aacgtcgacc gcgagctgca
      301 catgatcgag cgcggcggag agtcccgcga accgggggac cgcgccctca cggaaggtga
      361 gacgagcctc gtcgccccgc accagcagat gctgcaggcc caactccgcg ccgatcaccc
      421 gcaggcgcgc catgtcgagc agttgctccg cgctctcggg caggggcccg aagcgttccc
      481 ggagctcgtc gcggagcggt tcaatgtcgc tggacgtcgc ggcccgcgcc agtcggcggt
      541 agaagtcgag cttgaccgcg tcgtcggcca catagctgtc cgacagggtg gccggtttgt
      601 cgagcaccac ctcgggcggc tggggccgct cacccttccc ctggccccgc agcgccttga
      661 ccgtctcctc cagccagcga aggtagagat cgaagcccac cgcgtgcgca tgccccgact
      721 gttccgcgcc cagcaggttg ccggcacccc ggagctcgag atccttgagc gcgatgcgat
      781 accccgcgcc cagctcggta tgatgctcca gcacccgcaa ccgttcctcc gcatcctggt
      841 cgatcaggtc gggcaccagc aggtagcagt acgcccgccg gtgactccgt cccacccgcc
      901 cacgcagctg gtagagctgg gccagcccga accggtgggc gtcgtgcacc accatggtgt
      961 tggcgttggg cacgtcgagc cccgactcca cgatcatggt ggagacgagg atctggacct
     1021 cattcgacac gaaccgccgc atcacctctt ccagctcgtc cccggccatc tgcccgtggc
     1081 ccaccgccac ctgggccctg ggcgcgaggg accggacccg ggccgcgatc gtctcgatgg
     1141 tctcgatccg gttgtgcacc acgaagacct ggcccccccg gtccaattcc cgggcaaagg
     1201 cctcgtcgag gagaccgtcg tcccacggct ccacgaacgt caggataggg gaccggtcgc
     1261 ggggtggcgt ctcgatcagc accaggtcgc ggagccccgc gagcgatagg tgcagggtcc
     1321 gcggaatcgg ggtggccgtc agggtcagga catcgaccgt gaggcgcagg gtcttgagcc
     1381 gctccttgtg cttcaccccg aagcggtgct cctcgtcgac caccaggagt cccagctcct
     1441 tgaacgtgac gtctggtgac agcagccggt gggtgccgat gatgatgtcg gtctcgcccg
     1501 cgaccagccg ctccagcgcc agcttctgct ccttcgcggt gcggaatcgc gacagcacct
     1561 cgatcttgac cgggaaatcg gccagccgct cggtgaaggt ccgtgcatgc tggtccgcca
     1621 ggatggtggt cggcaccagt accgccacct gcttcccgcc ctgcaccgcc ttgaacgccg
     1681 cccggacagc gacctcggtc ttgccgtagc ccacgtcgcc caccagcagc agatccatcg
     1741 ggatcggctg ctccatcgcc ttcttcaccg cctcggtggc cttccgctgg tcgggcgtat
     1801 cctcataaag gaaggaggac tcgagctccc gctgccactt ggtgtcgggc gggaaggcat
     1861 accccgcgct caccttccgg cgggcgtaga ggtcgagcag ctccgacgcc atctccttga
     1921 tggcctggcg ggtcttgtcg cgaaccttct gccagctgtt gccgccgagc ttgtggagcc
     1981 ggggcggcgg ctgatcgcca tcctcgcccg cggcgcggta gcgctccagc tgatccagcc
     2041 gatagagagg aacgttgagc cggtccccac cttcgtactc gacgatggcg acttccagga
     2101 tcgcctcgcc cacctggatc gtggcaatcc cgcgatagat cccgatccca tggtcgagat
     2161 gcaccacgta gtcgccggcc tggagctggc cggtcgccgc tcccgtggcc gcctggcggt
     2221 aacgccgcga gcgccggatg cgccgggccc ggcggaagat ctcgtgatcg gtgagcaccc
     2281 ggaggctccg catcacgaag ccgccgtcga gcgccccgat cgcgagcgtc gcgttggccc
     2341 gccccgagcc ctcgctcagc agttcgtcga gccgctcgag ctgcccctcg ttgtcgcaga
     2401 gaatcagggt cggctgatcg gccgagagca tgctccgcag ccggcggaga tcgcgctcga
     2461 tgcgctccgg gggaaagaac ccggcgttga gatccccggt ctccgcccgc accgcgaggc
     2521 gggggaatgc cgcgatccgc ctgctccacg tctccggcgc ctcgaacagg tcgtcgcggg
     2581 ccgagacttc ttcgccgagg cggcgcgcga cttcgagatg atgggccgcc tcccgccatg
     2641 agcgggtgac ctcctcgccg ttggcatgcg gcacatcttc gaggatcagg gtatccgagg
     2701 ggaggagctc gaggagggac tgtcgttccc catcgcccac agccggttca tcggcggcgg
     2761 cggacagcga gcggatcggc aggatggtga gttcgtcgat cgaatcgccc gaccgctggc
     2821 tggtgagatc gaacgcccgg atcgactcga gatcgtcgcc ccaccactcg aggcgggccg
     2881 gggtcgccat cccgaagccg tacacgtcca cgatcccgcc ccgcacgctg aactccgcca
     2941 cctcggtgac gatcgggacc ttctcgtagc ccatcgcctc gagcgcggcc acgacgccgc
     3001 tcagggtgcg ggcgcccttc gcttcgctcg ccctcggctt gaccccggtc ccgatccgga
     3061 gcgtcgagtc cttgagccga gccggaaccc gggtccgttc ctggcaggcc cgcgcggtgg
     3121 tgaccagaat ccggagccgg ccctcgagca gcgccgccag ggtctcggcc cgttcgccgg
     3181 caatctcgta gtgcggttcc tcctccccca gcgcttcgcg ctgcggatag agggctacgg
     3241 catcatcggt gagatgtccc aggtcggtga gccatcgctc ggcgtccgcc ggcgtggtcg
     3301 ccacgatggt gagcaggcgt ccgggaaaag aacgcaccag ccacgcggcc agcaccgagg
     3361 ggctcgaacc ggccagtcct gcgatggcca gctgctgtcc ccgttgcggc agcctgtctt
     3421 tgagatcaaa cgcaattggc gttcgttcga acgcgtccag cagcagcttg agcgtcatgt
     3481 gctccggcga acaccgctgg ccagggccac ctccatcagg cccagggcca ggaccagcca
     3541 caacagcgga cccacgagac tcgcccggcc cgcccctgca aaggcggctc ccgcggcatc
     3601 cgccagcgga accacccgcg ccccgggcca caacccggtg acggcaccat cggaggccgg
     3661 cgagagtaat gactcccgtg ggtcgagcgc aacggccagc cccccgacag tgtctttccc
     3721 ggcgagcagg aagtaggccc ccggctccgg tgggcggaac gccgccccgc cctcgactcg
     3781 ccagcgccgc tcgccctgca ccacctccgt caccagatcg ggcagcagca ccggatcgcc
     3841 tggcgtaccg gtcagggagg ccacctgtcc ccgcgccagc cgattcacca tcgcatccat
     3901 gagcggcatg aagccggccc ccagcggtag ggccgtccag gagggatcga agcggctgcc
     3961 gatcaggagc acgttgccat cccgcaccag ccagggcgtg ccacccgcgg tcaccagcac
     4021 acctggcgcc gcactcggcc gcgccggctg aaggagatag cgcttgccga tcgcgacccg
     4081 gccgagcaac ggaccactat cggtaacggt gggggtttcg gacagggtgc cataccgcca
     4141 gccgaggccg cgccgctcga gagcccggtt cacggcgccc agcgccgcgg gatcggccgg
     4201 tggcgccacg atcgacggcc cgttgccgag cgtcccgagg gaaatctcgg taccgcgccg
     4261 gatccgtccg ctcgccagca gcacttccga ggcggcggcg agatagcgat cggcggggtc
     4321 ccacgcgacc tgcgccaccg gcgccacccg caccagcgcc agccggtcat catcggcgcg
     4381 gagctcgtcc ggcgccttgg acgcgcgcac cgtccaccat cctggcaccg ccgggcccag
     4441 cgtgaagctg acggccccac cagacgggac cagcgcctgc cgcgcaggcc ggtcgcggag
     4501 cgcgaccgac accggcgccg gcgccgtggt gtcgccctcg atccgcacgg tgaccgcccc
     4561 accctcgggc gtccacggct gggccccggc atcgacaccc gcgatgccct gattgaccgg
     4621 cacattccgc tccggccgcg ccaccagcag cggcaccgtg ctgcgtgcgg gtgacagtgc
     4681 actcgcctgc aggtccgaca ggagcacgat cccgcccggc cggcggtcgg tgcggagcac
     4741 ctcgcccgcc agcgcgagcg cctgccccag atccatgcgg cgcgatgtgg gctggagact
     4801 gtcgaccgca tgccggagcg catccggcga gccgcgccgc gccaccccgt cgctggtcag
     4861 gagccagagc gcgtccgacg gcgtcgcctg cgccagcacc cggttggcgg cggcccgcag
     4921 ctcgttgaga cgcggcgtgc cgctcaccac cacgccgctc gagggggaat catccagcac
     4981 caccaccagc gcgctgggcg agtgactgct ggcctgcttg agcggggccg agggtccggc
     5041 ggccgccacg atcagggcga tgatgaggag ggtgcggagg atcaggagca gcaggtggcg
     5101 gagcttgagg cggcgctgat gttcctgggt cacctgcacc aggtagcgca ccgcggggaa
     5161 ctccaccgtc ggcggatcgc gccgctgaat gagatgcagc accaccggta ccagcgccag
     5221 cggcagcgcc gcgagcaccc acggcgcgag gaatcccatc aggcaatccc ggcaggccgc
     5281 gctaccaccc ggcggagcgc atgaccgaag ggggtatcgg tggtgatctg gtggtactgc
     5341 atgccgctgg tgcggcaggc ccggcgccac gcggccacca cgccctgcac cgtctccttg
     5401 tacgcctcgg cccagtcctt gggcctgagc gtgacgcccg acccggtctc cggatcctcg
     5461 aatcgcgcct cggccgggcc gccgagatcc agttcggcgg gatccatgat gtggagcacg
     5521 atcacctggt gtccgcggtg cttgaggaac ttgagcgcgc ggagcgccag ctcccggtcg
     5581 aggaggagat cggaaatgaa gatcaccagt ccgcgccggc gcagcagatc caccacccgc
     5641 cggagcgcgg gctccgcggc ggtgccctgc cccggcgtga gcccgcggag ggtatcgagc
     5701 agctgatacc agtgcgaagt gcgggcccgc gccgggacga tcgagcggat gccctcgtcg
     5761 aaggcgatga gaccggtcgc atcccgctgc cggagcagca gcatcgccag agccgcggtg
     5821 agctgcttca ggtaggcgag cttggggagc accaggtcgg gattgccgct ccacgccatc
     5881 gagcggctca catcggtcac cagcatggcc cgcaggttgg tctcttcctc atactgcttc
     5941 acgtagagac ggtccttgcg gcccagcagc ttccagtcga cataccgcag ttcgtcgccc
     6001 ggctgataca tccggtgctc ggcgaactcc accgagaaac cgcggcgagg cgagcgatgc
     6061 aaccccgcga gaaatccttc gacgactcct tcggtcagta attccagacc ggccaggcgg
     6121 gacgcctcgc gggggtcgag cagatcgagt cggggatggg cagacggcgc gggaatggac
     6181 atcgcgggcg caacgtatcg ggaacgggcg ggtgaagtca acgcgagacc tcgctgtccc
     6241 cctcgcagga cgaacggccg ccttgccgcc ctgccgcctt gccgcccaag tcattgatct
     6301 gcatcagctt gtctctgcga tccagactgg cataccccct gctcctccac attgtgtcca
     6361 ctccgcggta tttctggagg tgcttatgtc cgccaccctg agtctggtcc tggccgccct
     6421 gacggccact ccgcttgcca gccgcgagcc ggcgccggcc caacccacgt cgctgattgc
     6481 cacgtggatc cgggcccaga gcgaggaccg cccccgcgtc agcgtgtggg tgaatcgcga
     6541 tgacccgtat cagcggggcg acgacgcgcg ggtgtacttc aagtccgacc gcgacgccta
     6601 cgtgaccgtc atccggattg atacagacgg acggatgcgg gtgctgtttc cgatcgatcc
     6661 ctgggaagac aacttcgccc gcggcggcag gaccttcgag gtgctgggcc gcgaccggga
     6721 cgaggcgttc cgggtcgacg actaccccgg cgtgggctac atcttcgcga tcgcctcacc
     6781 cgacgagttc cgctatgacg atcttgtgcg gggcgaccac tgggactatc gcaccatctc
     6841 cgacgggcgg gtccgcggcg acccgtacgt cgccgtctcc gacctggccg accgtatcgc
     6901 gcaggaagat gactacgact acgacgtgac cagctacgac gtcgagcggc actacgacta
     6961 tccccgcttc gtctgctacg actgccacac ctacgccagc tggcactact gggatcccta
     7021 cagctcctat tgctcccgct tccagatcgt gatctacgac gactggtatt actacccgta
     7081 ccggcgctat cgcggcggcg tgtatgtcgg ccggccctat cgccccggtc cccgctacgt
     7141 cttcaaggat tacgataagc ggaacgacta catcacccgc gttgccgagc ggcctcgtgg
     7201 tggtgatccc gtccggcgca ccagcgcgga tgtgggcggt cgtggctcga tccctactcc
     7261 ggtctcgccc cgccgccgca ccgatgacgg caaccgcggc gccgagccag gccgggcccc
     7321 gtcgaacgat ccccgccgtc gcaccgaggg tggcaaccgt ccggacgcga accggcccga
     7381 cgcgagcccg agccaggagc cgcgccgccg gaccgacgac aacggcaatc gccccgaggc
     7441 cggccggccg gaccagggaa gcggccagga gccgcgccgg cgcggcaccg acaatggcgg
     7501 ccgcccggag aatccggctc ccgatcgtca gccgtccaac cagctgcgcg aggatcgccc
     7561 ggaacggcgc accatcgagg accggcccag ccgggacgac ggcgcgagca gtgagcgccg
     7621 tggccgccgt tcccgcgacg atggcagcaa ccccggcctg agcgagccgc gggttgcacc
     7681 cgaccgggcc cgaccgaacg agccgcggtt cgcacccgac cgggcccggc cgagtgagcc
     7741 gcgcgccacc acccgcgagc cccgcaggga accgcggagt cagccccggg ccgaaccccg
     7801 ctcggaaccc cgttccgcgc cgagatccga accgcgccag tctccccctg
//
LOCUS       DATIFF010001027         1048 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1821085, whole genome shotgun sequence.
ACCESSION   DATIFF010001027 DATIFF010000000
VERSION     DATIFF010001027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1821085"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..837
                     /locus_tag="VLD58_14940"
     CDS             <1..837
                     /locus_tag="VLD58_14940"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HSB55654.1"
                     /translation="GHPGEALSMAVIAAVNLKGGVGKTSCCIHLGGALAQLGHRVLLI
                     DNDPQSSLTAGFLGPLESRQIDPAATIAAVLAGDDPYPEAVIRPTAYERIDLLPGSRL
                     AASFNVPDPHKAPYEDQVRLRDFLAPVRGAYDVVMIDCPPNLHLASWSALAASDCLMV
                     PVMPEDFGAQGTADVAECAALARAVINPGLTLLGYVVSMYNSRRTGHRLYVETMRAGH
                     GGAVFETMIPDVADFADAIGLLKPVTVYKPRSAAAKAIKALAEEILARLAVPAGSERG
                     AA"
     gene            837..>1048
                     /locus_tag="VLD58_14945"
     CDS             837..>1048
                     /locus_tag="VLD58_14945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55655.1"
                     /translation="MGKLDELMKAEGTRAASLGLGTAPGVTPPGMSPADAQRLPARLQ
                     GTAKSRNTIEVETDRIIPDPDQPRQE"
BASE COUNT          171 a          360 c          362 g          155 t
ORIGIN      
        1 gggcaccccg gggaggccct ctcgatggcc gtgatcgcag ccgtcaatct caagggcggc
       61 gtgggtaaga cctcttgctg catccacttg ggcggcgccc tggcccagct cggccaccgc
      121 gtgttgctga tcgacaacga cccgcagtcg agcctcacag cgggcttcct gggcccgctg
      181 gagtcacgcc agatcgaccc ggcggcaacg atcgctgccg tgctggccgg ggatgacccc
      241 taccccgagg ccgtgatccg gcccaccgcc tacgagcgga tcgacctgct gcccgggtca
      301 cggctggccg cctcgttcaa cgtccccgac ccgcacaagg ctccctacga ggatcaggtc
      361 cggctccgcg acttcctggc tccggtgcgg ggggcctatg acgttgtcat gatcgactgc
      421 ccaccgaact tgcatctggc gagttggtcg gcgctggcgg ccagtgattg cctcatggtc
      481 ccggtgatgc ccgaggactt cggcgcacaa gggacggctg atgtcgccga gtgcgctgcg
      541 ctggcgaggg ccgtcatcaa ccccggcctg acgctactgg gctacgtagt cagcatgtac
      601 aacagccggc gcaccggcca ccggctgtac gtcgagacga tgagggcggg ccacggcggg
      661 gccgttttcg agacgatgat ccccgacgtg gctgacttcg ccgacgcgat cgggctactc
      721 aagccggtga cggtctacaa gccgcgcagt gccgccgcca aggcgatcaa ggcgctggcc
      781 gaggaaatcc tggcccgcct ggcggttccc gccgggagcg aaaggggggc cgcctgatgg
      841 gcaagctgga cgagctgatg aaggccgagg ggaccagggc cgcgagcttg ggtctgggca
      901 ccgccccggg cgtgacaccg ccgggtatgt cgccggcgga tgcgcaacgg ctcccggcac
      961 ggctccaagg tacggccaag agcaggaaca ccatcgaggt cgagaccgac cgcatcatcc
     1021 cggatcccga ccagcctcgg caagagtt
//
LOCUS       DATIFF010001028         2930 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1360171, whole genome shotgun sequence.
ACCESSION   DATIFF010001028 DATIFF010000000
VERSION     DATIFF010001028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2930
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1360171"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..742)
                     /locus_tag="VLD58_14950"
     CDS             complement(<1..742)
                     /locus_tag="VLD58_14950"
                     /inference="COORDINATES: protein motif:HMM:NF014731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HSB55656.1"
                     /translation="MNEDPAGPSGHPPKGKILAGLALAALGVVYGDIGTSPLYALKEC
                     FGEQHGIPPTPENVLGVLSLILWSLNFVVSYKYIAQVMRCDNRGEGGILALLALASGP
                     DGRRRRTWLVLIGLFGAALLYGDGVITPAISVLGALEGIEYATPVFRSYIVPLTAAIL
                     FFLFLFQKRGTAGVGVIFGPIMIAWFLCISLLGLRGIVQEPTVLLALNPWYALDFFMR
                     DGLQGFLILGAVVLVITGGEALYADMGHF"
     gene            complement(739..1191)
                     /locus_tag="VLD58_14955"
     CDS             complement(739..1191)
                     /locus_tag="VLD58_14955"
                     /inference="COORDINATES: protein motif:HMM:NF019499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin K epoxide reductase family protein"
                     /protein_id="HSB55657.1"
                     /translation="MRYRMAAAVLSLGGFFLSLYLYLHKIGVIGELACGTGGCEKVQF
                     SSFGRFLGLDVPLIGMGGYLSLLGACLAALQRPDDPRWPRLLLALSVVGVAFTAYLKY
                     VEFFVLHALCRWCVASAVFITLILILALLDRRSRIGPATRDADLAESR"
     gene            complement(1193..1882)
                     /locus_tag="VLD58_14960"
     CDS             complement(1193..1882)
                     /locus_tag="VLD58_14960"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HSB55658.1"
                     /translation="MAAAPGGLNRFYTLLGGAAIVCLAVIGALVFRRPAVSIPANPVI
                     QVSDTSGFHGYLLGSDSAPLEVTEYADYECPACQQWAVVQFPTIQERLIQSGRVRWRY
                     RDFPLEIHPHSRVAAHAAACAEEQGKYWPMNQRIYSWEQRWPEKRDASGVFRDMARGV
                     GLDLARYDACMTSARYAGRIQASELEGMQAGVQSTPTFLINGRLYPGGNHVHYDMLKA
                     MLDSLGRQPGK"
     gene            complement(1858..2160)
                     /locus_tag="VLD58_14965"
     CDS             complement(1858..2160)
                     /locus_tag="VLD58_14965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55659.1"
                     /translation="MGDHDEVYGRAREDQLRALLRHLAERIQDLDRAGRLLDSASELQ
                     RLLGDARSELFHYEVRSTYDTPEIAESRRIVEEARRAGFSIDPPEDEQPWRPPQAD"
     gene            2330..2608
                     /locus_tag="VLD58_14970"
     CDS             2330..2608
                     /locus_tag="VLD58_14970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55660.1"
                     /translation="MAKAKPRRTPPEPRLFDQARDELFSHILRCGVLEALPEHQKEWF
                     DDTMLYLAERYEGLTEEELGQLRLLGERYCQPVVNRPATAQTEAASVN"
     gene            complement(2668..>2930)
                     /locus_tag="VLD58_14975"
     CDS             complement(2668..>2930)
                     /locus_tag="VLD58_14975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55661.1"
                     /translation="RLAGRGELLAQFLLSPGRTRGAGLYGLGGVAGQAGRRDRGFLVL
                     GLGLEGAPGGASGWFAEAGVGGGARVAAGWRWRWRTGNGSRS"
BASE COUNT          525 a         1022 c          979 g          404 t
ORIGIN      
        1 cgaagtgccc catgtccgca tagagcgctt cgccgcccgt gatcaccagc accacggcgc
       61 cgaggatgag gaagccctgc aggccgtcac gcatgaagaa gtcgagggcg taccagggat
      121 tgagcgcgag caggaccgtc ggctcctgga caatcccgcg cagtccgagc aggctgatgc
      181 agaggaacca cgcgatcatg atcgggccga agatcacgcc gaccccggcc gtaccccgct
      241 tctggaacag aaacaggaag aagagaatcg cggcggtgag cggcacgatg tagctccgga
      301 agaccggagt ggcgtactcg atgccctcga gcgcgcccag caccgagatg gcgggggtga
      361 tgaccccgtc gccataaagc agggcggcgc cgaacagacc gatgagcacc agccaggtgc
      421 gccggcggcg gccgtccgga ccgctggcca gcgccagcag ggccaggatg cccccctcgc
      481 cccggttgtc gcaccgcatc acctgggcga tgtacttgta gctcaccacg aagttcaaag
      541 accacaggat aagcgacagg acgccgagga cgttctccgg cgtcggcggg atgccgtgct
      601 gctcgccgaa acattccttc agggcgtaca gcggactcgt gccgatgtcg ccgtagacca
      661 cccccagcgc cgccagggcc agcccggcga ggatcttacc cttcggcggg tggccactgg
      721 ggccagcggg gtcttcgttc accgagactc ggccaggtcg gcgtccctgg tggcaggacc
      781 gattcgggat cggcggtcca ggagcgccag gatcaggatg agggtgatga aaaccgccga
      841 ggccacgcac cagcggcaca gcgcgtggag cacgaagaat tccacgtact tgaggtaggc
      901 cgtaaacgcc accccgacca ccgagagggc caggagaagc cgcggccagc ggggatcatc
      961 gggccgctgc agcgcggcaa gacaggcccc cagcaggctc aggtagcctc ccatcccgat
     1021 cagtggcacg tccagcccga ggaaccggcc gaaggaggag aactggacct tctcgcatcc
     1081 gcccgttccg caggcgagct ccccgatcac cccgatcttg tgcagataca gatacagcga
     1141 caggaagaag ccgcccaggc tgaggacggc ggctgccatg cgatagcgca tgtcacttcc
     1201 cgggctgacg cccgagcgag tcgagcatgg ccttcagcat gtcgtagtgg acgtggttgc
     1261 cgccggggta cagccggcca ttgatgagga acgtcggggt ggactgcacc cccgcctgca
     1321 tcccctccag ctcgctggcc tggatccggc cggcatagcg ggccgacgtc atgcaggcgt
     1381 cgtagcgcgc gaggtccagg ccgacgccgc gggccatatc gcggaacacg ccgctggcgt
     1441 cgcgcttctc cggccagcgc tgctcccagc tgtagatccg ctggttcata ggccagtact
     1501 tcccctgttc ctcggcgcag gcggcggcat gggccgccac ccgggagtgc gggtggattt
     1561 cgaggggaaa atcgcgatac cgccagcgga cgcggccgct ctggatcagc cgttcctgga
     1621 tggtgggaaa ctgcacgacg gcccactgct ggcaggcggg gcactcgtaa tcggcgtact
     1681 cggtgacctc gagcggcgcg ctgtcgctcc cgagcaggta accgtggaac ccgctggtgt
     1741 ccgacacctg gatcacgggg ttcgccggga tgctgaccgc cggccggcgg aagaccagag
     1801 ccccgatgac ggcgaggcat acgatggccg ccccgcccag cagcgtgtag aaccggttca
     1861 gtccgcctgg ggcggccgcc atggctgctc gtcctccgga ggatcgatgg agaagccggc
     1921 ccgccgtgcc tcctcgacga tgcgccggct ctcggcgatc tcgggagtgt cgtaggtgga
     1981 acggacttcg tagtggaaca gctcgctccg ggcgtcgccc aggagccgct gcagctcgga
     2041 cgccgagtct aacaggcgac cggcgcgatc gaggtcctga atccgctcgg ccaggtggcg
     2101 cagtaacgcg cgcagctggt cttcgcgggc tcggccgtac acctcgtcgt ggtcacccat
     2161 cgctcggtct cgcttccgac gggcacctgg aatcgcccgt ctcgctcggg atgcgccctg
     2221 aatgtaatca ggcccggaac cggtcggggg ctgagccgcc catttgcccg aggggctcct
     2281 aaccggttat attcggcccg aacattcccg gctcaggaga ccgccaagaa tggctaaagc
     2341 gaagccccgc cgtaccccgc ccgaaccccg gcttttcgat caggcacgcg atgaactgtt
     2401 cagccacatc ctgcgctgcg gcgtcctcga ggcgctgccg gagcaccaga aggagtggtt
     2461 cgacgacacc atgctgtatc tcgcggagcg gtacgaaggc ctgaccgaag aggaactggg
     2521 ccagctcagg ctgctcgggg agcgctattg ccagcccgtg gtgaatcgcc cagccaccgc
     2581 ccagaccgag gctgccagcg tcaattagcg cggcccggag tttcggcgca cagtgaaacg
     2641 ccccggccaa tgccggggcg ttgtcgttca ggaacgtgag ccgttgcccg ttcgccagcg
     2701 ccagcgccag ccggcggcca cccgggcccc gccccctact cctgcctcgg cgaaccagcc
     2761 cgacgcgcct cccggcgccc cttcgagccc cagccccagc accaggaaac cgcggtcacg
     2821 ccggccggcc tggccggcca ccccgcccag cccgtaaagc cccgcgccac gcgtcctgcc
     2881 aggtgagagc aggaactgcg cgagcaactc cccccgaccc gccaggcgac
//
LOCUS       DATIFF010001029         1065 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_284800, whole genome shotgun sequence.
ACCESSION   DATIFF010001029 DATIFF010000000
VERSION     DATIFF010001029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_284800"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..625
                     /locus_tag="VLD58_14980"
     CDS             <1..625
                     /locus_tag="VLD58_14980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55662.1"
                     /translation="ANLVAESGDLAGGIADWRRAVAVAPSYTQGLAFLSLGHYWTRQY
                     DSAAHWADSAIAVDPGYLLGRSTAGFVAIERGDFARARAQFEAAVRLTSDVELANSLT
                     GLALAEARAGQTREAQATLARAESLSVKYLPAPLHTVVYLAQAYLALHQDRRALAWLA
                     RYPTPASVHFQLHLRCGPPFDPIAGDDRFNALLTAPRPAGPHGCGVR"
     gene            736..>1065
                     /gene="selD"
                     /locus_tag="VLD58_14985"
     CDS             736..>1065
                     /gene="selD"
                     /locus_tag="VLD58_14985"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015934631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004756 - selenide, water dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0001887 - selenium compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_except=(pos:802..804,aa:Sec)
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HSB55663.1"
                     /translation="MPDQPQDQKPRIRLTTLSHGAGUACKLGPAELAQVLKAVPVGGD
                     PRILVDAASRDDAAVYAITDDRAIVATVDFFTPIVDDAATWGRIAAANALSDLYAMGA
                     TPLFALSL"
BASE COUNT          164 a          391 c          339 g          171 t
ORIGIN      
        1 ggctaacttg gtggcagagt ccggagacct cgcgggcggg attgcggact ggcgccgggc
       61 ggtggccgtc gcgccgtcgt acacgcaggg cctggccttc ctctcgctcg gacactactg
      121 gaccagacag tacgatagcg cggcacattg ggccgacagc gctattgcgg tggacccggg
      181 ctacctgctg ggtcgctcca ctgcggggtt cgtggccatt gagcggggcg acttcgcccg
      241 cgcccgagcg caattcgaag ccgcggtacg gctcaccagc gatgtagagc tggccaattc
      301 actcacgggc ctggcgctcg ccgaggcccg ggcgggtcaa acccgtgaag ctcaggccac
      361 gctcgcgcgc gccgagtcgc tttcggtgaa atacctgccc gcaccgctcc acaccgtcgt
      421 ctatctcgcc caggcgtatt tggccctcca ccaggaccgg cgagccctgg cctggctcgc
      481 ccggtatccc acgccggcga gtgtgcattt tcagctgcac ctgaggtgtg gtcctccgtt
      541 cgatccgatc gcaggagacg acaggttcaa tgcgctgttg acggcaccgc gtccggccgg
      601 cccgcacggt tgtggagtcc ggtgacgggc cggtgcgcgg gttcgctggc attttgtggc
      661 agatccgagt agaaatcccc gaccaacgcc atcgaacgca tcctccagcg ccggccagca
      721 gccaacccga actcgatgcc cgaccagccc caggaccaga agccccgcat caggctcacc
      781 acgctctccc acggcgccgg ttgagcctgc aagctcggtc ccgccgagct ggcccaggtc
      841 ctcaaggccg tgcctgtcgg aggggatccg agaatcctgg tagacgccgc gtcgcgtgac
      901 gacgccgcgg tctacgccat caccgacgac cgggccatcg tggccacggt cgacttcttc
      961 acgcccatcg tcgacgacgc cgccacctgg ggccgcatcg ccgccgccaa cgccctgagc
     1021 gacctctacg ccatgggcgc caccccgctg tttgccctga gcctc
//
LOCUS       DATIFF010001030         4877 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_284841, whole genome shotgun sequence.
ACCESSION   DATIFF010001030 DATIFF010000000
VERSION     DATIFF010001030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4877)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4877)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4877
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_284841"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..223)
                     /locus_tag="VLD58_14990"
     CDS             complement(<1..223)
                     /locus_tag="VLD58_14990"
                     /inference="COORDINATES: protein motif:HMM:NF022179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="late competence development ComFB family
                     protein"
                     /protein_id="HSB55664.1"
                     /translation="MSATGLRNLIEDHAAEAYERLVTHYPDFCGCDTCRLDVLVYALN
                     RLPPRYVVGLEGTIVTGINLDKDQSRASIE"
     gene            complement(220..1533)
                     /gene="miaB"
                     /locus_tag="VLD58_14995"
     CDS             complement(220..1533)
                     /gene="miaB"
                     /locus_tag="VLD58_14995"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HSB55665.1"
                     /translation="MKRVYLETYGCQMNVADSQLMLGALARDGYVQVESPEGADVMLV
                     NTCAVRDNAEQRVIGRLGELQHYKQRGGVLGVVGCMAQRLGPKLLERVPKVDLVAGPD
                     AYRNLAALVAQAAQGDRSADTEFRSWEHYEDVPAQREAGPSAFVTVQRGCDYKCTFCI
                     VPYTRGPERSRKLGDVVREVADLVAGGTTEVTLLGQTVNSYHDGERDFADLLRAVGAV
                     EGLRRLRFTSPYPTDFTATVISAMAEVPAVCEHVHLPVQSGSNAVLRRMLRRYTREQY
                     LEVVSQLRAAIPGITFSTDIIVGFPGETEAQFEETLSLVEAAGFDDAYTFRYSVRDGT
                     PAERLKDHVPEEIAAGRLERLIELVRTQARSRHLARVGSTVEVLVERPARRGELMLAR
                     TRTNLMVLLDLPPSAAGEYHLVQLTGTTGSTFTGTVVRPQLAVLA"
     gene            complement(1571..2746)
                     /locus_tag="VLD58_15000"
     CDS             complement(1571..2746)
                     /locus_tag="VLD58_15000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55666.1"
                     /translation="MSFLRTLALVGLIGFAVSEPATLAAQSSMFGVRGLGFPGRPLTP
                     RSRATGGAFGLFDPESEVNPAAIATQTAVTAGFVLASGRRHWEAPAGTASLRETRFPL
                     IYVGGPVPGSRLGLGISIGSYADRDFRLASADTINIRGQDVGVNDTLSSLGGLNEIRL
                     ATGIMLGKKTGIGGGFHFITGSSRLDARRHFSDTTFTPLRQTAELSYHGIGFSLGITH
                     QLTSGVKLAAMVRSDTRAKVDLDSTRAYTIDLPFTFSGGAQIQASRRLSVALAGTYRT
                     WSGANSDLLAQGAPGARNTLELNAGGEFIRNVRRPSRLPIRLGVRYADIPFPVQQGGK
                     PKEFSISAGTGTRFAAERGGIDFTLEQAWRSEGSSYKERAFTFMFGLSIRPYGEARR"
     gene            complement(2748..3950)
                     /locus_tag="VLD58_15005"
     CDS             complement(2748..3950)
                     /locus_tag="VLD58_15005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55667.1"
                     /translation="MLRTRPLIPFAALLLVAGCQERLASPADCPDLCPGGYTIYTDTL
                     YAIPGGDSAATGYLRAGQGSSLRVSWQFPVSEDRAVYRFTRRTDSLTINGKARAYTVD
                     SLALELSILYRDTTVHGLKVYLYRVPVTFDSTTSFAEVEAAFTPATVVDSFLVDDTLQ
                     TKRLRVVYIGSDTSKLSLPAADSARLALGVQIRAAQGTGIRIGGAGAGSAAPSFINYV
                     TVPNSDTSTVNRIITPSIQFNSYVSQAPPALDPDLLTIGGTPSSRSLIRFPWSARLKD
                     SATLIRATLQLLPSAPLAGLTGDTALVVARPILADFGAKSPAVTATAFTTSLPVLPGV
                     TDTVALEVRTQLTSWQGSKPVPPALTLQLSPEVSSFSRFTFGSTRTPGKVPRVIVTYA
                     LKFPFGEP"
     gene            complement(3970..4362)
                     /locus_tag="VLD58_15010"
     CDS             complement(3970..4362)
                     /locus_tag="VLD58_15010"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR01354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004126 - cytidine deaminase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009972 - cytidine deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HSB55668.1"
                     /translation="MADQLRAAAEAARTQAYCPYSGFAVGAALEAEDGRIFVGCNVEN
                     ASHGVTICAERAALTAAVTGGARRFRRLAIVASADPAVAPCGACRQALAEFGLELRVE
                     GFGPAGSRRWTLAELLPDAFGRGALTDH"
     gene            complement(4355..>4877)
                     /locus_tag="VLD58_15015"
     CDS             complement(4355..>4877)
                     /locus_tag="VLD58_15015"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682939.1"
                     /note="catalyzes the transfer of phosphate between the C1
                     and C5 carbons of pentose; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HSB55669.1"
                     /translation="PGDTLLSRLAGAHIPRLGVGKVDDLFAGRHITSMHPVNNGEAYQ
                     LIESALRRMPRGFLFANVIEFDQSWGHRNDVPGYHRGLLALDVALPAMLAPVREHDLV
                     IITADHGNDPTTPSTDHSRERVPVLAVGPRVRARPIGVRQTFADVGQTLAEFFGLAPL
                     PVGRSFLAEIWDG"
BASE COUNT          791 a         1668 c         1707 g          711 t
ORIGIN      
        1 cctcgatcga ggcccggctc tgatccttgt cgaggttaat cccggtgaca atcgtgccct
       61 cgaggcccac cacgtaccgg ggcggcaggc gattcagggc gtaaaccagg acgtcgagcc
      121 ggcaggtgtc acagccgcag aagtcggggt agtgggtcac gagccgctcg taggcctcgg
      181 cggcgtgatc ctcgatgaga ttgcggagac cggttgcgct catgccagca ccgccagctg
      241 aggtcggacg actgttccgg tgaacgtgga gccggtcgtg cccgtcaact gcaccagatg
      301 gtattccccc gccgccgagg gcggcaggtc gagcaacacc atgagattgg tgcgggtccg
      361 cgccagcatc agctcgcccc gcctggccgg ccgctccacc agcacctcga cagtcgatcc
      421 cacccgggcg aggtgccggc tccgcgcctg ggtccggacc agctcgatca gccgctccag
      481 ccgacccgcg gcgatctcct ccgggacatg gtccttgagc cgttccgcgg gggtgccgtc
      541 gcgcaccgaa taccggaaag tatacgcatc gtcgaacccc gccgcctcga ccaggctgag
      601 ggtctcctcg aactgcgcct cggtctcgcc cgggaaaccg acgatgatgt cggttgaaaa
      661 ggtgattccc gggatggcag cccgcaactg gctaacgacc tcgaggtact gctcccgggt
      721 gtagcggcgg agcatgcgcc tgaggaccgc attggaccca ctctgcaccg gcagatgcac
      781 atgttcgcag accgccggca cctcggccat ggcagagatg accgtggcag tgaaatcggt
      841 gggatagggg ctggtgaagc gcagccgccg gagcccctcg accgcgccca ccgcccgcag
      901 gaggtccgcg aagtcgcgct caccgtcgtg gtagctgttc accgtctggc ccagcagcgt
      961 gacttcggta gtgccgcccg ccaccagatc ggccacctcg cggaccacgt ctcccagttt
     1021 acggctccgc tccggaccgc gggtatacgg aacgatgcag aaggtgcact tgtaatcgca
     1081 cccccgctgt accgtgacaa acgcgctcgg ccccgcctcg cgctgcgccg ggacgtcctc
     1141 gtagtgctcc cagctccgga actcggtatc ggcggaacgg tcgccctgcg cggcctgggc
     1201 gaccagcgcc gcgagattgc ggtaggcatc ggggcccgcc accagatcga ccttgggcac
     1261 ccgctcgagc aacttgggcc cgaggcgctg cgccatgcac ccgactacgc cgagcacccc
     1321 gccccgctgc ttgtagtgct gaagctcgcc cagccggccg atgacccgct gctccgcgtt
     1381 gtcgcggacc gcgcaggtgt tcaccagcat cacatccgcg ccctcgggac tctcgacctg
     1441 gacgtagcca tcccgtgcca gggctcccag catgagctgg gagtccgcca cgttcatctg
     1501 gcagccgtag gtctcgaggt agacgcgctt catgggggaa acatacgcgg cagggaggaa
     1561 ggccgcttcc ttacctgcgc gcctcgccgt aggggcggat ggagagcccg aacatgaacg
     1621 tgaacgcccg ctccttgtag gacgagccct cactccgcca ggcctgctcc agggtaaagt
     1681 cgatgccgcc ccgctccgcc gcgaaccggg tgccggtccc cgccgaaatg ctgaactcct
     1741 tcggcttgcc gccctgctgc accgggaacg gtatgtcggc gtaacggacg cccaggcgga
     1801 tcggaagccg gctgggccgg cgcacattgc ggatgaactc accgccggca ttcagctcca
     1861 gggtgttccg cgctcccggg gctccctggg ccagcaggtc gctgttggcc ccggaccagg
     1921 tccggtaggt gcccgcgagc gccacgctca gccggcgcga tgcctggatc tgggcgccgc
     1981 cgctgaaggt gaacggcagg tcgatcgtgt aggcgcgggt ggagtcgaga tcgaccttcg
     2041 ccctggtatc ggagcgcacc atggccgcca gcttcacgcc tgacgtcagc tggtgggtga
     2101 tccccagcga gaagccgatg ccgtgatacg agagctcggc cgtctggcgc agcggagtga
     2161 acgtggtatc ggagaagtgc cgccgggcat ccagccggct cgaaccggtg atgaagtgga
     2221 agccaccgcc gatcccggtc ttcttgccca gcatgatgcc cgtcgccagc cggatctcgt
     2281 tgagtccgcc gaggctgctc agcgtgtcgt tcacgccgac atcctggccc cggatgttga
     2341 tcgtgtcggc cgaggcgagc cggaagtcgc gatcggcgta gctcccgatc gagatgccga
     2401 gaccgagccg cgagcccggc accgggcccc cgacgtagat cagcggaaac cgggtctcac
     2461 gcagggatgc cgtgccggcc ggcgcttccc aatgccgccg gcccgaggcc agaacgaaac
     2521 cggccgtcac cgcggtctgg gtcgcgatgg cggcggggtt gacctcgctc tcggggtcga
     2581 agaggccgaa ggcgccgccg gtcgcacggc tccggggcgt cagcggccgc cccgggaagc
     2641 caagtccccg cacgccgaac atggagctct gggccgcgag cgtggccggc tcggagaccg
     2701 cgaaaccgat caggcccaca agggcgagag ttcggaggaa ggacacgtca gggctctccg
     2761 aacgggaact tgagggcata cgtgacgatg acccgcggca cctttccggg tgtgcgggtg
     2821 gagccgaacg tgaagcggct gaagctgctc acctcggggg agagctggag cgtgagcgcg
     2881 ggcggcaccg gcttgctgcc ctgccaggag gtgagctgcg tccggacctc cagtgccacc
     2941 gtatcggtca cgcccggcag caccggcagc gatgtggtga acgccgtggc cgtcaccgcc
     3001 gggctcttgg cgccgaagtc ggccagtatc ggccgcgcca ccaccagggc cgtgtcgccg
     3061 gtgaggcccg cgagcggcgc cgaggggagc agctggaggg tcgcgcggat cagggtggcc
     3121 gagtccttga gccgggccga ccacgggaag cggatcaggc tccgggaact cggcgttccg
     3181 ccgatcgtca gcaggtcggg gtcgagcgcg ggcggcgcct gggagacgta gctgttgaac
     3241 tgaatcgacg gcgtgatgat ccggttcacc gtgctggtgt cggagttggg caccgtcacg
     3301 tagttgatga acgacggcgc cgcgctgccg gccccggccc cgccgatgcg gatgccggtg
     3361 ccctgcgccg cccggatctg tactcccagc gccagcctgg cgctgtcggc ggcgggaagg
     3421 ctgagcttgc tggtgtcgct gccgatgtag accacccgga gccgcttggt ctggagcgtg
     3481 tcatcgacca ggaagctgtc gaccaccgtc gccggggtga acgcggcctc gacctcggcg
     3541 aagctggtgg tcgagtcgaa ggtcaccggc acgcgataca ggtagacctt gagcccgtga
     3601 acggtggtat cgcggtacag tatcgagagc tcgagggcga gcgagtcgac cgtgtaggcg
     3661 cgcgccttgc cgttgatcgt gagcgaatcg gtgcggcggg taaaccggta caccgcgcgg
     3721 tcctcgctga ccgggaactg ccacgacacc cggagcgaac tcccctgccc ggcgcggagg
     3781 tagccagtgg ccgcgctgtc accgccgggg atggcgtaga gggtgtcggt atagatggta
     3841 tatccgcccg ggcagaggtc ggggcagtcg gcgggcgacg cgagtcgctc ctgacagccg
     3901 gcgaccagga gcagcgccgc gaaggggatc agaggtctgg tacgcagcaa gtcgtctctc
     3961 ggaacaggat tagtgatcgg tcaacgcgcc ccgcccgaag gcatcgggca acagctccgc
     4021 cagagtccac cggcggcttc ctgcaggtcc gaacccttcc acccggagct cgagcccgaa
     4081 ctccgccagc gcctgccggc aggccccgca gggcgccacc gcgggatcgg ccgatgccac
     4141 gatggccagc cggcggaatc gccgcgcccc tcccgtcacc gcggcggtga gcgccgcgcg
     4201 ctcggcgcag atcgtcaccc catgagacgc attctcgacg ttgcagccca caaaaatccg
     4261 gccgtcttcc gcctcgagcg cggcacccac cgcaaagccc gaataggggc agtacgcctg
     4321 cgttcgcgcc gcctcggcgg cagcgcgcaa ctggtcagcc atcccagatc tccgccagga
     4381 aggatcggcc gacggggagc ggcgcaaggc cgaagaactc cgccagcgtc tggccgacgt
     4441 ccgcaaaggt ctgacggacg ccgatggggc gggcccgcac ccggggtccc acggcgagca
     4501 ccggcacccg ttcccgcgag tggtcggtcg agggggtggt gggatcgttg ccgtggtcgg
     4561 cggtaataat aaccagatcg tgctcccgga ccggggccag catcgccggg agcgcgacgt
     4621 cgagggccag cagaccgcgg tgatagccgg gcacgtcgtt gcggtgcccc cagctctggt
     4681 cgaactcgat cacgttggcg aagagaaagc cgcggggcat ccgccgcagc gccgactcga
     4741 tcagctggta cgcctcgccg ttgttgaccg ggtgcatgct ggtgatgtgc cggccggcaa
     4801 agagatcgtc caccttcccc accccgagcc gcgggatgtg cgctcccgcc agccgactga
     4861 gcagcgtgtc gccgggc
//
LOCUS       DATIFF010001031         1468 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_129951, whole genome shotgun sequence.
ACCESSION   DATIFF010001031 DATIFF010000000
VERSION     DATIFF010001031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1468)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1468)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1468
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129951"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1468)
                     /locus_tag="VLD58_15020"
     CDS             complement(<1..>1468)
                     /locus_tag="VLD58_15020"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HSB55670.1"
                     /translation="TDARVAYDADALYVMVDAWEAHPGGVRASSMVRDDDAPGDFVNV
                     MLDTFNDRQTAVTFSTTPGGQRNDWTVSNDAQGDNALSPAWNGVWDLAVRRGSDGWHA
                     EFRIPFSTLRFSSHGGRIEFGFSVNRLTAHSNERVTFPAIEPSGPVALWKPSHWQRVS
                     IENIRPGRSLRVTPYALAGVEGGHTPDPAFSPWSRNDRMEAGGDLKLGMTPSLTLDLT
                     ANTDFAEAEVDDQRVNLTRFPLFYPERRAFFVERAGTFEVHTGENDILFNSRRVGLTA
                     EGEPVRLLGGVRVVGRVAGWDVGLFDAQTGRTPAGYRENLGVVRLRRAVLNAHSWAGV
                     MATTWFTPDSSQAALAVDGDLNLGGDDYVGFAAVTLAGDAPGGPNQGVMPRGALRIRA
                     ERRRDRGVWYRAALATTGSRYTPALGYVERGDAIQPAAELGYGRVISPAGHEIRASVV
                     SAYAYHNASGDFDGSTNSVKFAFKQPSGTTWTLTGTRQ"
BASE COUNT          227 a          513 c          491 g          237 t
ORIGIN      
        1 tcctgccgcg tcccggtgag tgtccacgtc gtgccgctgg gctgcttgaa ggcgaacttc
       61 acgctgttgg tcgatccgtc gaaatcaccc gaggcattgt gataggcata ggccgagacc
      121 acactggcgc ggatctcatg cccggccggc gagatcaccc ggccgtagcc aagctctgcc
      181 gcaggctgga ttgcgtcacc ccgctcgacg tatcccagcg ccggcgtgta ccgcgacccg
      241 gtggtggcca gcgcggcgcg gtaccagact ccccggtcgc gccggcgttc ggcccggatc
      301 cggagtgcgc ctcttggcat cacaccttgg tttggcccgc cgggtgcatc gcccgcaagc
      361 gtcaccgcgg caaagccgac ataatcgtcg ccgccgaggt tgaggtcgcc gtcaaccgcg
      421 agcgcggcct ggctggagtc gggcgtgaac caggtcgttg ccatcacccc ggcccatgag
      481 tgggcgttga gcaccgcccg cctgagccgc accacgccga ggttctcgcg ataccccgcc
      541 ggagtgcggc cggtctgagc gtcgaagagg cccacatccc accccgcgac ccgtcccacc
      601 actcgtacac cgccaagcag ccggaccggc tcgccttcgg cggtgaggcc cacccggcgg
      661 ctgttgaaga ggatgtcgtt ctcgccggta tggacctcga acgtcccggc ccgctccacg
      721 aagaaggcgc gccgctcggg gtagaacagc gggaaccggg tcaggttcac ccgctggtcg
      781 tccacctccg cctcggcgaa gtcggtattg gcggtgagat cgagcgtgag gctcggcgtc
      841 ataccgagct tgagatcgcc gccggcttcc atccggtcgt tgcgggacca gggcgagaag
      901 gccggatcag gcgtgtgtcc cccttcgacg ccggcaaggg cgtaaggcgt gacccggagg
      961 ctccgcccgg gacggatgtt ctcgatgctc acccgctgcc agtgcgaggg cttccagagg
     1021 gccaccggtc ccgagggctc gatcgccggg aaggtgaccc gttcgttgga atgcgcggtt
     1081 agccggttca cgctgaagcc gaactcgatc cgcccgccat gactcgagaa cctgagggtc
     1141 gagaacggaa tccggaactc ggcgtgccac ccatcggagc cgcggcgcac cgccaggtcc
     1201 cacaccccgt tccacgcggg gctcaaggcg ttgtcaccct gggcatcgtt gctgacggtc
     1261 cagtcgttcc gctggccacc cggcgtggtg ctgaaggtga ccgcagtctg gcggtcgttg
     1321 aaggtgtcga gcatgacgtt cacgaaatcg cccggggcat cgtcgtcccg caccatggag
     1381 ctggcccgga ctccgcccgg gtgtgcttcc caggcatcga ccatcacgta gagcgcatcg
     1441 gcgtcatacg ctacccgcgc gtcggtgt
//
LOCUS       DATIFF010001032         1508 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1667835, whole genome shotgun sequence.
ACCESSION   DATIFF010001032 DATIFF010000000
VERSION     DATIFF010001032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1508
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1667835"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..604
                     /locus_tag="VLD58_15025"
     CDS             <1..604
                     /locus_tag="VLD58_15025"
                     /inference="COORDINATES: protein motif:HMM:NF018076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HSB55671.1"
                     /translation="AWRAGLGVRKVGRFAVVPTWIAYEAAPDELVITLDPEMAFGSGE
                     HGSTRGALHLLARHLTPGDRVLDLGSGSAILSIAAAMLGAARVAGIELDPEAIPASLQ
                     NVGRNGVAATVRIVEGDAAAMTPLLAPADLIVSNILRLVNQTLLSVIHMALVPGGRAI
                     FSGMEQSEAELFRGPLAAHGFTVIDEVVDENWWSVAVRRG"
     gene            601..1305
                     /locus_tag="VLD58_15030"
     CDS             601..1305
                     /locus_tag="VLD58_15030"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016436 - rRNA (uridine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmE family RNA methyltransferase"
                     /protein_id="HSB55672.1"
                     /translation="MITVLAEPGSIVTGGVLKVSVPEEHHLGVLRVEERSELRVVDGQ
                     GTIGWGRFTWSPPTIAIERVEQAPAPVPLWLAAGAGDKDRFFTLVEKAVELGVTRIVP
                     LETEHSRSVSSRVRPVHVEKLVQRAGQALKQSRNPWLPVIDQPATLDSFVRMDLPAVR
                     WLADGAGPRPTRVEATTAMVVVVGPEGGLTDSEREALVRAGFAPVTLGPYVLRFDTAA
                     VAALTLAAHLRSREPA"
     gene            1302..>1508
                     /locus_tag="VLD58_15035"
     CDS             1302..>1508
                     /locus_tag="VLD58_15035"
                     /inference="COORDINATES: protein motif:HMM:NF023395.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HSB55673.1"
                     /translation="MTDCIFCRIASGDIPAKIAKKSPEAVAFYDLNPQAPTHLLLIPT
                     RHYGAVRDARGSEGQAVLGKLLAFA"
BASE COUNT          208 a          510 c          538 g          252 t
ORIGIN      
        1 ggcctggcgc gccggtctcg gtgtccgcaa ggtgggccgc ttcgcggtgg tgccgacctg
       61 gattgcgtac gaggcagcgc cggatgagct ggtcatcacg ctcgatcccg agatggcgtt
      121 cggcagcggc gagcacggct cgacccgcgg ggcgcttcac ctcctcgcac ggcatctcac
      181 acctggagac cgggtgctcg acctcggcag cggttccgcc attctctcga ttgccgcggc
      241 catgcttggg gccgcgcggg ttgccggcat cgagctcgac cccgaggcga tcccggcctc
      301 gctgcagaac gtcgggcgca acggggtggc cgccacagtg cgcatcgtcg agggcgatgc
      361 ggccgcgatg acgccgctcc tcgctcccgc cgacctgatc gtctccaaca ttctccggct
      421 ggtgaaccag accctcctgt ccgtgattca catggcactg gtgcccggcg gccgcgccat
      481 cttcagtggg atggaacagt ctgaggcgga gctcttccgc gggccgctgg ccgcgcacgg
      541 cttcaccgtg atcgatgagg tggtcgacga gaactggtgg tcggtggcgg tgcgccgcgg
      601 atgatcacgg tgctggcgga gccgggctcg atcgtcacgg gcggtgtgct caaggtgagt
      661 gtgccggagg agcatcatct cggcgtgctc cgggtggagg agcggagtga gctgcgggtg
      721 gtggatggcc agggtacgat cggatggggc cggttcacct ggtcgccgcc gaccatcgcg
      781 atcgagcggg tcgagcaggc cccggccccc gtccccctct ggctcgcggc cggcgcgggt
      841 gacaaggacc ggttcttcac cctcgtcgag aaagcggtcg agctgggcgt cacccggatc
      901 gttccgctcg aaaccgaaca cagtcgctcc gtttcgagcc gggtgcgtcc ggtccacgtc
      961 gagaagctgg tgcagcgggc cggccaggcg ctcaagcagt cgcgtaatcc ctggctaccc
     1021 gtgatcgacc aaccggctac cctcgacagc ttcgtgcgca tggacctgcc ggcggtgcgc
     1081 tggctggccg atggagccgg gcctcgtccc acgagggtcg aggccacgac cgccatggtg
     1141 gtcgtggtcg ggccggaggg agggctcacc gatagcgagc gggaagccct ggtccgcgcc
     1201 ggattcgcgc ccgtgaccct cggcccgtac gttctacgct tcgatactgc ggccgtggct
     1261 gcgctcaccc tggctgctca cctgcgttcg cgggagcccg catgaccgac tgcatcttct
     1321 gccggatcgc ctcgggcgac atcccggcca agattgcgaa gaagtcaccg gaggccgtcg
     1381 ccttctacga tctcaatccc caggcgccga cccacctgct gctcatcccg acccggcact
     1441 acggcgcggt gcgggatgcc aggggatcgg aaggacaggc ggtgctgggc aagctgctgg
     1501 cctttgcc
//
LOCUS       DATIFF010001033         1396 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_285292, whole genome shotgun sequence.
ACCESSION   DATIFF010001033 DATIFF010000000
VERSION     DATIFF010001033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1396
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_285292"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..394
                     /locus_tag="VLD58_15040"
     CDS             <1..394
                     /locus_tag="VLD58_15040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55674.1"
                     /translation="PLVPLEVIGVSFQDVNRFRDEEQASDQAVSTIDSGTFGFGVGNR
                     AAHTLAKGEDLPLHGFRGAIRDVAVDSQAVALTLEGTVDSLPASLGSIPSKLQVFWSA
                     HPVASGGAGLIYLALFVLVGLYWKRGTR"
     gene            540..>1396
                     /locus_tag="VLD58_15045"
     CDS             540..>1396
                     /locus_tag="VLD58_15045"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HSB55675.1"
                     /translation="MVAASNRIVIATAAHVVRAAQQGGSVRVVFQFARNDTVEAKIEQ
                     LDRELDLAVLSLARDGPAPIQFAFDRGGDPGALEIGALVVPMGCPERRCWEPPVSGDR
                     VISASSRRVRFESFFVSPGSSGGALFNQQWEVVGLVTEKNTQDGIAVGMSEVADRLRK
                     WGYTVQLGPTRIPRAGYRTRLSLVGLAPTSGDLTQSGRWPSGRLALLLRGQERIGWHL
                     TAIRLAPQDLKVTGGMVGTSVALRAGRLGIAPFGEVGVARVNGRFNAGSYFIQGPNGP
                     VAVPVWQTVT"
BASE COUNT          201 a          459 c          509 g          227 t
ORIGIN      
        1 ccccctggtg ccgctcgagg tcatcggcgt gagcttccag gacgtcaatc ggttccgcga
       61 cgaggagcag gccagcgatc aggcggtgtc gaccatcgac agcggcacgt tcggattcgg
      121 tgtcggcaac cgggctgccc ataccctggc gaagggggag gacctgccgc tgcacggctt
      181 ccgcggcgcg atccgcgacg tcgcggtcga ctcccaggcc gtagccctca ccctcgaggg
      241 taccgtcgat tccctgcccg cctcgctcgg ctcgatcccg agcaagctgc aagtcttctg
      301 gtcggcgcat cccgttgcct cgggcggcgc cggcctcatc tacctcgcgc tgttcgttct
      361 ggtcgggctc tattggaaga ggggcacacg atgagagcgg ttgcctgtct ggtgctggtc
      421 actatcgcgg ctgccccgct ggcgggccag cggatgtcac acatgccggt ggaggccgcc
      481 aacctggtgg tccaggtgct ggccagcggg gggatgacga ggaggtcggg gccgggatcg
      541 tggtcgcggc atccaatcgc atcgtcatcg cgaccgcggc ccacgtggtc cgcgcggccc
      601 agcagggcgg cagcgtccgc gtggtgttcc agttcgcccg caacgacaca gtcgaggcga
      661 aaatcgaaca actggaccgc gagctcgacc tggcagtgct gagcctggcg cgtgatggac
      721 ccgctcccat tcaattcgcg ttcgaccggg gaggagaccc cggagcgctc gagatcggcg
      781 ccctggtggt gcctatgggg tgccccgagc ggcgttgctg ggagccgccg gtgagcggcg
      841 accgtgtgat cagcgcgagc tctcgccgag tgcgcttcga gtcgttcttc gtgagcccgg
      901 ggagctcggg gggcgcgctc ttcaaccagc agtgggaagt ggtagggctg gtgaccgaaa
      961 agaacaccca ggacggcatc gcggtcggca tgagcgaggt ggccgaccgg ttgcggaaat
     1021 ggggctacac cgtccagctc ggtccgacgc gcatcccccg cgccgggtac cgcacccgcc
     1081 tcagtctggt cgggttggcg ccgacctctg gcgacctgac ccaatccggc cggtggccga
     1141 gtgggcgact ggcgctcctg ctccggggcc aggagcggat cggctggcac cttaccgcta
     1201 tccgtctggc gccgcaggac ctgaaagtga ccggcggcat ggtggggacc agcgtcgcgc
     1261 tccgggccgg acggctcggg atcgccccgt tcggcgaggt cggggtcgcc cgggtgaatg
     1321 gacgcttcaa cgccgggagt tacttcatcc agggcccgaa tggaccagtg gcggtccccg
     1381 tctggcagac ggtgac
//
LOCUS       DATIFF010001034         3979 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1822018, whole genome shotgun sequence.
ACCESSION   DATIFF010001034 DATIFF010000000
VERSION     DATIFF010001034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3979
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1822018"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..829
                     /locus_tag="VLD58_15050"
     CDS             <1..829
                     /locus_tag="VLD58_15050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55676.1"
                     /translation="LWHTAVFSNDGRQVVFTDEWGGGTGPMCQATSMLEMGGNTTLTI
                     DAKRKFTQHAYFKIPTAQSAQENCVSHNGGLVPVPGRDIMVQGWYQGGISVVDFTDPD
                     HPKELAYFDRGPIDSAPPTDSAANQGGRRMSGTIGGSWGAYYWNGLVYSSELDRGLDI
                     LELLPSEQLSANELAAARLVRMEEYNPQSQPHVTWPAAFPVVRAYLDQLVRGEGLSAT
                     RTTAIGQALDAAEKATGAKRRSALTALAATVDRDVTAAKDPERVKAMSAAIKALAKT"
     gene            973..1287
                     /locus_tag="VLD58_15055"
     CDS             973..1287
                     /locus_tag="VLD58_15055"
                     /inference="COORDINATES: protein motif:HMM:NF014643.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HSB55677.1"
                     /translation="MPGVTVSSTEAQNEFGRVLDQAARDELVVITRHDVPRAVLMSVS
                     RYQALLGAQETRLGELTARFDVLLEEMQRPDVQAATLRGFRATPKEMGRAAVAAARRA
                     KA"
     gene            1322..1951
                     /locus_tag="VLD58_15060"
     CDS             1322..1951
                     /locus_tag="VLD58_15060"
                     /inference="COORDINATES: protein motif:HMM:NF025052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSB55678.1"
                     /translation="MAGVNGAGKSSVLGTAVEAAGGRYFNPDDAARQLRAERPDLDPP
                     AANAAAWEAGRRHLERAIRDGLFYAFETTLGGDTITRLLHEALRAGREVHLRYVGLDG
                     AERHIARVQARVAAGGHPIPEAMIRHRYESSRANLLSLLPHLTLLELYDNTPEAPPEQ
                     GIAPEPRLLLRLERGKVTMLTPPATIPGWAKPIVMAAVQLDPQSLRRGR"
     gene            complement(1974..>3979)
                     /locus_tag="VLD58_15065"
     CDS             complement(1974..>3979)
                     /locus_tag="VLD58_15065"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HSB55679.1"
                     /translation="APSLAGEWDVYIALSARPHFGFEGWRRMGFAHFAASDSGWLKRR
                     TGQPILTVISISSNGDSVLLTQDSATVMRAAWHGDTLTGVQFVRGKPIDRRYRLVRRA
                     SPGVVEQDYQVWTMPASDSQYAVTIDTSTLMPLRDGAKLETYIVRPVGPGPFGVVMQR
                     SPYRATNPAAGRWWASRGYIYIGQLVRGRGKSSGDVADFGDYSTDIQDGYDAVEWAAK
                     LPGSNGKVALIGHSDEGRLAWYAAVSAPPHLAALSPTAATSDPWRIVPYAAMAFGPIN
                     VDWACLMRERDMATNTAELDIGEAITHLPIATLPQRLGCGSIPLWDRWIAHPTLDAYW
                     RERAVTTFINKVNVPVLSMAGWHDDSRGPLDYTDALLKNPKHPAWHLVMGTHAHKGVD
                     YVAGDFGPQARYAYRDLQLRWFDHYLLGKDNGVDKLPPVDIFVQGDNTWRTEHEWPLA
                     RARATRWYVSSGGAAQTSAGDGVLDTLPPRGAVADTFTYDPGDPTPYLIDSRELEESL
                     NEDYTALNATRRDALVFTSRPLTRPLEVTGEMSATLWASSDARDTDWAIMLLDVFPDG
                     HAERVQDGFARARFRKGMDREVPLVKGRVERYDLDLWFTSTVFPPGHRLRVSISSALF
                     PKYDRNLNTGGNNERDSTFVVAHQRLLHDAAHPTHVVLPVVPR"
BASE COUNT          655 a         1300 c         1393 g          631 t
ORIGIN      
        1 gctctggcat acggcggtct tcagcaacga cggaaggcag gtcgtgttca ccgacgagtg
       61 gggcggcggc accggcccga tgtgccaggc cacgtccatg ctggagatgg gcggcaatac
      121 cacgctgacc atcgatgcga agcggaagtt cacccagcac gcgtacttca agattccgac
      181 ggcccagtcg gctcaggaga attgcgtgtc gcacaacggt gggctggtgc cggtcccggg
      241 acgcgacatc atggtgcagg gctggtacca gggcggcata agcgtggtgg acttcaccga
      301 tcccgatcac ccgaaggaac tggcctactt cgatcgcggc ccgatcgact cggcgccgcc
      361 caccgactcc gccgccaacc agggaggccg gcggatgagc gggaccatcg gcggttcgtg
      421 gggtgcgtac tactggaatg gcctggtcta ttcgtcggag ctcgaccgcg ggctggacat
      481 cctggagctg ctgccgagcg agcagctgtc ggcgaacgag ctggcggcag ccaggctggt
      541 ccgcatggag gagtacaatc cgcagagcca gccccatgtc acctggccgg ccgcgttccc
      601 ggtggtgcgc gcctacctgg accagctggt ccgcggggag ggtctctccg ctactcggac
      661 caccgccatc ggccaggcgc tcgacgcggc cgagaaggcg actggcgcca agcgacgctc
      721 ggcgctgact gcgctcgccg cgaccgtaga ccgcgacgtg accgcggcga aggatcccga
      781 gcgggtgaaa gcgatgtccg cggccatcaa ggcgctcgcg aagacctgag ccgtattggc
      841 cagaagggcc ttcgctctgc tatactagct ataatggcta taatagctat tatagctatt
      901 atagcaatgg gggtgagtat ggcgattcga cggaagcggg taccacaggc ggttgatcga
      961 gcagtttcgt cgttgcccgg tgtcacggtc agctccaccg aggcgcagaa cgagttcggg
     1021 agggtgctcg atcaggcggc ccgggacgag ctcgtggtga tcacgcgcca cgacgtgcct
     1081 cgcgcggtcc tgatgtcggt gagccggtat caagcgctgc tgggcgcaca agagacgcga
     1141 ctcggcgagt tgaccgcccg gttcgacgta ctacttgaag agatgcagcg gccggacgtg
     1201 caggcggcta ctctgcgcgg attccgggcc acgccgaagg agatggggcg agcggcagtg
     1261 gccgcggcac gacgtgccaa ggcctagccc ggctcggtca gatccgccgc ccattctggt
     1321 gttggcgggc gtcaatggag ccggaaagag cagcgtgctg ggaacagcgg tcgaggcggc
     1381 aggcggtcga tacttcaatc cagacgatgc ggcacgtcag cttcgtgccg agcggcctga
     1441 tctcgatcca ccggcggcca acgcggcggc gtgggaggcg ggcagacggc atctcgagcg
     1501 ggccatccgg gacgggctgt tctacgcgtt cgagacgacg ctcggcgggg acacaatcac
     1561 caggctcctc cacgaggcgc ttcgcgccgg acgtgaggtt catctccgct acgtgggcct
     1621 cgatggagcc gagcgtcaca ttgcacgggt ccaggcccgc gtcgccgcag gaggacaccc
     1681 catccccgag gcgatgatcc gccatcgata cgaaagcagc cgcgcgaatc ttctatccct
     1741 cctgccgcat ctcacactcc tcgagctcta cgacaacacg cccgaggccc caccggaaca
     1801 gggaatcgct ccggagcctc ggctcctctt gcgactcgag cggggtaaag tcacaatgct
     1861 gactcctccg gcgaccattc ccggctgggc gaagcccatc gtcatggcag ctgtccagct
     1921 ggatcctcag agccttcgcc gggggcgata gccttgcccg ggtcgtgggc gccctaccgg
     1981 ggcaccaccg ggagcaccac gtgcgtcggg tgggccgcgt cgtgcagcag ccgctggtgc
     2041 gccaccacga aggtcgagtc ccgctcgttg ttcccgccgg tgttcaggtt gcggtcgtac
     2101 ttggggaaca gcgctgacga gatgctgacc cggagacgat ggcccggcgg gaacaccgtg
     2161 gacgtgaacc acaggtcgag gtcgtaccgc tccacccgtc ccttcaccag cggtacctcg
     2221 cggtccatcc ccttccggaa tcgtgcccgg gcgaacccat cctgcacccg ctcggcgtgt
     2281 ccatccggga aaacgtcgag cagcatgatg gcccagtccg tgtcgcgcgc atcgctcgag
     2341 gcccagagcg tcgccgacat ctcgccggtg acctcgaggg gacgggtgag gggccgggag
     2401 gtgaacacca gcgcgtcgcg ccgggtggcg ttgagcgcgg tgtagtcctc gttgagcgac
     2461 tcctccagct cccgtgaatc gatgagatac ggggtaggat ctcccggatc gtaggtgaag
     2521 gtgtcggcga ccgcgccccg agggggcaac gtatcgagca caccgtcccc ggcgctggtc
     2581 tgcgccgcac cgcctgacga tacgtaccac ctggtggccc gggcccgcgc cagcggccac
     2641 tcgtgctccg tccgccaggt gttgtcgccc tgcacgaaga tgtcgaccgg cggaagcttg
     2701 tcgacgccgt tgtccttgcc cagcaggtag tggtcgaacc agcgcagctg gaggtcgcgg
     2761 taggcgtagc gcgcctgggg cccgaagtca cccgcgacgt aatccacgcc cttgtgcgca
     2821 tgggttccca tgaccaggtg ccaggcgggg tgcttcggat tcttgagcag cgcgtcggtg
     2881 tagtcgagcg ggccgcgcga gtcgtcgtgc cagccggcca tcgagagcac cgggacgttc
     2941 accttgttga tgaaggtggt gacggcacgc tcccgccagt aggcgtcgag ggtcgggtgg
     3001 gcgatccagc gatcccagag cgggatgctg ccgcagccga gccgctgggg cagggtggcg
     3061 atcgggaggt gggtgatggc ctcgccgatg tccagctccg ccgtgttggt ggccatgtcc
     3121 cgttcccgca tcaggcaggc ccagtccacg ttgatcggcc cgaaggccat ggcggcgtag
     3181 gggacgatgc gccaggggtc cgacgtcgcc gccgtcggcg agagagctgc caggtggggc
     3241 ggggcactca ccgcggcata ccaggccagg cggccttcgt ccgagtgccc gatcaatgcg
     3301 accttgccgt tcgagccggg aagcttcgcc gcccactcca ccgcgtcgta cccatcctgg
     3361 atgtcggtgc tgtagtcccc gaagtccgct acgtcgccgc tcgacttgcc ccgtccccgc
     3421 accagctgcc cgatatagat gtagccgcgc gacgcccacc agcgtccggc ggcgggattg
     3481 gtggctcgat agggcgaacg ctgcatgacc acgccgaagg gtcccggtcc gaccggccgc
     3541 acgatgtagg tctcgagctt cgccccgtcg cggagcggca tgagggtcga agtgtcgatc
     3601 gtgacggcgt actgcgagtc ggacgccggc atggtccaga cctggtaatc ctgctccacc
     3661 acacccgggc tggcccggcg gaccaggcgg tagcgacggt caatcggctt gccgcggacg
     3721 aactgcaccc cggtcagggt gtcgccgtgc caggcggccc gcatgaccgt ggccgaatcc
     3781 tgggtcagca gcaccgagtc gccgttgctg gagatgctga tgacggtgag gatcggctgg
     3841 ccggtgcgcc gtttgagcca gcccgaatcg ctggccgcga agtgggcgaa gcccatccgg
     3901 cgccacccct cgaagccgaa atggggtcgc gcgctcaggg cgatgtagac gtcccattcg
     3961 ccggccaggc tgggtgccg
//
LOCUS       DATIFF010001035         1704 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1361042, whole genome shotgun sequence.
ACCESSION   DATIFF010001035 DATIFF010000000
VERSION     DATIFF010001035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1361042"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            445..891
                     /locus_tag="VLD58_15070"
     CDS             445..891
                     /locus_tag="VLD58_15070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55680.1"
                     /translation="MKASLRLALALGVAVAACGGGATAPSPTSFAGSWRATKVEYVSI
                     ANPATKIDVIAQGATLTVQLNAGGSYSSVMTIPGEPQENTTGTWSASSDIFTMHWLEG
                     AIPNEMQFDYALGSSTLTLTGADTDFDFAGTGQSQAAKLNVTLVRQ"
     gene            complement(999..1370)
                     /locus_tag="VLD58_15075"
     CDS             complement(999..1370)
                     /locus_tag="VLD58_15075"
                     /inference="COORDINATES: protein motif:HMM:NF024245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HSB55681.1"
                     /translation="MSPRRFLSAFALLALAAAATLHAQDSTKRVKPATAAPGPARPAP
                     TSGPARPSGGALPTVKNPLDLNTATREQLIALPGIGTAYADKIIKGRPYAKKDQLLSK
                     GIVPEAAYKKIADIVIARQKP"
     gene            complement(1494..>1704)
                     /locus_tag="VLD58_15080"
     CDS             complement(1494..>1704)
                     /locus_tag="VLD58_15080"
                     /inference="COORDINATES: protein motif:HMM:NF021214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HSB55682.1"
                     /translation="VQIPMQILGAIITFADEPLYTWYVNAPRTWGLSPLDDQKLGGLL
                     MWVPGNLWIWGAMSLLFFRWAKTER"
BASE COUNT          274 a          587 c          569 g          274 t
ORIGIN      
        1 caagctcggc ggcctcgcct ggctcggctt cgccgcgacg ctcggcctcg ccgccaacct
       61 gttctccgac aagcccttcg ccgcattcct gatcgatgcg ggctatcagc tcgtgttcat
      121 gctcgcgatg ggagtgatca tcgcggtctg gccgtaagcc cgaaacggga gggggccgcg
      181 ccccgcggct tcctcccatg cggatggagc cgcagtcgcc cgactccatc gcggatcctg
      241 cgcggacatc cgcgcgccgg gttcgggcat cacccccgat cggctccacg gcggcaccac
      301 cccgatcagc ggctcctcga tggccactcc gcatgtcacg gccgcggccg ccgatgacct
      361 gccactggag agtctcacga gcccttcacg gacccgtcac cggacccggg ctagtttggg
      421 gcacgcattc tccaggagga gcccatgaaa gcgtctcttc gtctggctct cgccctcggc
      481 gtggcagtcg ccgcgtgcgg cggcggggcc accgcgccaa gcccgaccag ctttgccggg
      541 agctggcgcg ccacgaaggt cgaatatgtc agcatcgcca atcccgccac gaaaatcgat
      601 gtgatcgccc agggagccac cctgaccgtc cagctcaacg caggcggcag ctattcgtcg
      661 gtcatgacga ttccgggcga accccaggaa aacaccaccg ggacctggag cgcgagcagc
      721 gatatcttca ccatgcactg gctcgagggc gcgattccaa atgaaatgca gttcgactac
      781 gccctgggca gctcgacgct gacgctcacg ggcgccgaca ccgacttcga cttcgccgga
      841 accggccagt cccaggcggc gaagctgaat gtgacgctgg ttcgccagta ggagggcgcg
      901 ggacgtcgcc cgcgacgacg ccgatcgccc ggttccccgc aacgaaacgc cccggcacct
      961 gccggggcgt ttcgtgtgcc gggctggtcc gcaaggcgct acggcttctg cctcgcgatc
     1021 acgatgtcgg cgatcttctt gtacgccgcc tcgggcacga tccccttcga gagcagctgg
     1081 tccttcttcg catagggacg gcccttgatg atcttgtcgg cgtaggcggt cccgatgccg
     1141 gggagagcga tcagctgttc ccgcgtggcg gtgttcaggt cgagcggatt cttgacggtc
     1201 ggcagggcgc caccggaggg ccgggccggg ccggaggtcg gcgccggacg ggccggtccc
     1261 ggtgccgccg tggcgggctt gacccgcttg gtggagtcct gggcgtggag ggtcgcggcg
     1321 gccgcgagcg cgagcagggc gaatgcggag agaaaacggc gtgggctcat tccaacggct
     1381 ccgaatgggg gccttccacg ctgggaattc tccggccccg cgtcaattgg acagattggc
     1441 cggcatggga caatctgtca caacagtccg attgtccgac ggtccggctg ccatcaccgc
     1501 tccgtcttcg cccaccggaa gaagagcagc gacatcgcgc cccagatcca gagattcccg
     1561 ggcacccaca tcaggaggcc gcccagcttc tgatcgtcga gcggggagag accccaggtc
     1621 cgcggggcgt tgacgtacca ggtgtagagc ggctcgtccg cgaaggtgat gatcgccccg
     1681 aggatctgca tcgggatctg gacg
//
LOCUS       DATIFF010001036         1162 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1361084, whole genome shotgun sequence.
ACCESSION   DATIFF010001036 DATIFF010000000
VERSION     DATIFF010001036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1361084"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VLD58_15085"
     CDS             complement(<1..214)
                     /locus_tag="VLD58_15085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55683.1"
                     /translation="MIRVPGLEQKLSTLMSLAADDREGLPPRLRHADQAGALRPLNIR
                     TLQPSAGMRTSLLRILMTNACSYNCHY"
     gene            288..653
                     /locus_tag="VLD58_15090"
     CDS             288..653
                     /locus_tag="VLD58_15090"
                     /inference="COORDINATES: protein motif:HMM:NF025903.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tautomerase family protein"
                     /protein_id="HSB55684.1"
                     /translation="MPLVNISILKGRPPAYAKAIADGVNAAVIETMGFPDDDRYQIIT
                     EHEPHCLEHQTRTADRVMMYLIMRSGRSPEAKKAFYRRCVENLARDPGIEPGNVLITI
                     VENRDIDWSFRDGVAQFVP"
     gene            654..>1162
                     /locus_tag="VLD58_15095"
     CDS             654..>1162
                     /locus_tag="VLD58_15095"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HSB55685.1"
                     /translation="MLAALALAALTAQLPAPLDSVDRYVRSEVARQRIPGLSIAVLRG
                     DSLLLARGYGEANVEHHVPAADSTVYQSGSVGKQFTAALVVRLVQEGRLGLDDPIARW
                     LPEGPPEWRRITLRHLLTHTSGIPDYADSTLDYRKDYTEDELIALAAGLPPAFEPGAR
                     WSYSNTGYVL"
BASE COUNT          189 a          417 c          388 g          168 t
ORIGIN      
        1 agtagtggca gttgtagctg caggcgttgg tcatcaggat gcggagcaga gaggtgcgca
       61 tcccggcgga gggctgaagg gtgcggatgt tgagcggccg gagcgcgccg gcctggtcgg
      121 cgtggcggag gcggggcgga aggccctcgc ggtcgtcggc ggcgagggac atgagcgtgc
      181 tcagcttctg ctccagaccc ggcacccgta tcatttgcga ccatcccgga ctgatccctc
      241 ctcacagtag ccgaacaaac accgaaagtc aatcggacga cgatcccatg ccgctggtca
      301 acatctccat tctcaagggc cggcccccgg cctacgccaa ggccatcgcc gacggggtga
      361 acgccgccgt gatcgagacc atgggcttcc ccgacgacga ccgctaccag atcatcaccg
      421 agcacgagcc ccactgcctt gagcaccaga cccgtaccgc cgaccgggtg atgatgtacc
      481 tcatcatgcg gagcggccgg tcgcccgagg ccaagaaggc gttctaccgc cgctgcgtcg
      541 agaacctggc ccgcgatccg gggatcgagc ccggtaacgt gctcatcacc atcgtggaga
      601 accgcgacat cgactggtcg ttccgcgacg gcgtcgcgca gttcgtgccc taggtgctcg
      661 ccgcgcttgc cctggcggcc ctcaccgccc agctccccgc tccgctcgac tcggtcgacc
      721 gctacgtccg ctccgaggtc gcccggcagc ggatcccggg actttcgatc gcggtcctcc
      781 ggggcgacag cctgctgctc gcccggggct acggcgaggc gaacgtggag caccacgtgc
      841 ccgcggccga cagcacggtg taccagtcgg ggtcggtggg gaagcagttc accgccgcgc
      901 tggtggtgcg gctcgtccag gagggccgcc tggggctgga cgaccccatc gcgcgctggc
      961 tgcccgaggg gccacccgag tggcggcgga tcaccctgcg gcacctgctg acccacacct
     1021 cgggcatccc cgactacgcc gatagcaccc tcgactacag gaaggactac accgaggacg
     1081 agctgatcgc cctcgccgcc gggctgccgc ccgccttcga gcccggcgcc cggtggagct
     1141 acagcaacac cggctacgtg ct
//
LOCUS       DATIFF010001037         3370 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1515965, whole genome shotgun sequence.
ACCESSION   DATIFF010001037 DATIFF010000000
VERSION     DATIFF010001037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3370
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1515965"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VLD58_15100"
     CDS             complement(<1..214)
                     /locus_tag="VLD58_15100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55686.1"
                     /translation="MQLRTPDKESTMKALMLFPMGLAALLTTAPQSSKHEARVEGALQ
                     TTLAGQAVFGPIRGARNASFSLELGAY"
     gene            370..>3370
                     /locus_tag="VLD58_15105"
     CDS             370..>3370
                     /locus_tag="VLD58_15105"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HSB55687.1"
                     /translation="MLRINVLGGLYVSDEGRAVSGAAAQPRRLALLALLAVAKERGVT
                     RDALLGYLWPESDEERGRKALAQALYALRRDLGSDEALIGVKDLRLNPDLVQCDLWEF
                     QDATTTGSLDRAAELFRGRFLEGFHLPGADSFEQWVEDTRAGLTHEFAGLLHTLASRA
                     TGKGEHRSATGWLRKLAAQDPLNAQVACQLMESLAAQGDVAGALQHARVYETLIRQEL
                     DLPPDRDVMVVAARLRGVASGEMPASAPPPVAPPAPSPPPPPVVAPQPRAPTSPPPSS
                     EPQRPRSSTETAIGEIPDDDPSAATGPPTSGWATMKIPPGLGPIAQPAAPGSPRSGRR
                     QLWLAGIAVLITVAAVVLWRANHQVPVVVPVERVVAVGRIAHYTQMGLGGMGRPMADM
                     LATNLARATGMRVISSARMYELLGELASASDTTGVQIVAAARRAGATELIDGALYDVG
                     SGQLRLDLRRVDLASGAVLHAYTIQAPDLFTLADSGTSRLVDDLGGRAPVGSLADVST
                     KSVEAYRAYEAGLRTFFEGKTADAEKLFAEALAKDSAFAMAQFYYSLATSNGSRAEVS
                     TRLQRAVELAERASDRERLLIRATWAFYNSSPSIRAYAETLTVRYPTELEGYLMAGQG
                     AILAADFRAARGPLLEVIDRDSLGLKGQTVRCLACEALETLIGSMGQEDSLAAALALA
                     RRWARLQPNSGKALRYQAMLLGQMGYPDSARRALALADSIDPGAANRWRYLTALEMWK
                     FQYDSAAELARAAMQTGSGSDRVEGSWILAIAYRNLGRLNEALVQARAYRIGKADQTP
                     RGAAPLSAYLEAQVLFEMNRFRESGLLFDSISRASVPFEDSSNTARTWVWSTTHRASA
                     LAAQGDTSRLAMLADSMQREGQISGLERDRRLHHYVRGLLFASRGNDEQAVTEFREAI
                     TSRNSGYTRINYELARALLRLRRPREAVAVLQPVTRGIFEGASLYLTHSDAHELLGKA
                     WEAAGNADSAAYHYRLVAKLWENADPGF"
BASE COUNT          519 a         1149 c         1173 g          529 t
ORIGIN      
        1 tgtaggcgcc gagttcgagc gagaaggagg cgttgcgtgc tccgcgaatc gggccaaaga
       61 ccgcttggcc ggcgagagtg gtctgaagcg cgccctccac ccgggcctca tgcttcgagg
      121 actgtggagc agtcgtcagc agcgccgcca accccatcgg gaacagcatc agcgccttca
      181 tggtggactc cttgtccggg gtgcgcagtt gcatgggatc cggcgccaac gtcctgtcag
      241 gcaccctcac ccgggtgggc cgtgaatcga gttgccggcc cggttgacgg cgcctagtat
      301 accgacgcca gtcacgcggg aattccgccc gactcgcccc gttatcacct caaaatcacc
      361 cgagctaacg tgctcaggat caacgtctta ggcggcctgt acgtgagcga cgagggccgg
      421 gctgtgagcg gagctgcggc ccagccgaga cgcctcgcgc tgctggcgct gctggcggtg
      481 gccaaggaac ggggggtgac ccgggacgca ctgctgggat acctgtggcc tgagtcggat
      541 gaggagcggg gaaggaaggc cctggcccag gcgctctacg cgctgcggcg ggatctgggg
      601 tcggatgagg cgctgatcgg ggtcaaggat ctgcggctca accccgacct ggtgcagtgc
      661 gacctctggg aattccagga cgctaccacc accgggtctc tggatcgcgc ggccgagctc
      721 ttccggggcc ggtttctgga aggctttcac ctccccggcg ccgacagctt cgaacagtgg
      781 gtcgaggaca cccgggcggg gctcacccat gagttcgccg ggctgctgca cacgctggcc
      841 tcccgcgcga cgggcaaggg ggagcaccgg tccgccaccg ggtggctccg gaagctggcc
      901 gcgcaggacc cgctcaatgc ccaggttgcc tgtcagctga tggaaagcct cgccgcccag
      961 ggcgacgtgg ccggagcgct tcagcacgcc cgggtgtacg agacgctgat ccggcaggaa
     1021 ctcgatctcc cgcccgaccg cgatgtcatg gtggtggcgg cccggcttcg cggcgttgca
     1081 tcgggcgaga tgccggcctc cgccccgccg cctgtcgctc cacctgcccc ctcaccaccc
     1141 ccgccgcccg tcgtagcgcc ccagccgcgg gcgccgactt cgcctcctcc gtccagcgaa
     1201 cctcagcgcc cgcgttcatc gaccgaaact gctatcggcg agatcccgga cgacgatccg
     1261 tcggctgcaa ccggacctcc taccagcggc tgggcgacga tgaagatccc gcccggtctc
     1321 ggaccgattg cccagccggc tgcgcccggt tccccgcgca gtggacggag acagctctgg
     1381 ctcgccggta ttgccgtgct catcacggtg gcagcggttg tcctctggcg cgccaatcac
     1441 caggtccccg tcgtggtgcc cgtcgagcgg gtggtggcgg tcgggcgaat cgcgcactac
     1501 acccagatgg gtctcggcgg gatgggccgg ccgatggccg acatgctcgc gaccaacctg
     1561 gcccgggcca ccgggatgcg ggtgatcagc tcggcccgga tgtacgagct gctgggggag
     1621 ctggcgagtg ccagcgatac caccggggta cagatcgtgg ccgccgcacg gcgggccggc
     1681 gctaccgagc tgatcgacgg cgccctctat gacgtgggaa gcgggcaact acggctcgat
     1741 ctgcggcggg tggacctcgc cagcggtgcg gtgctccacg cgtacaccat ccaggcaccc
     1801 gatctcttca ccctggccga tagcggcacc agccggctgg tcgatgatct cggcggccgg
     1861 gcgccggtgg gttccctcgc tgacgtatcg accaagtcgg tcgaggcgta tcgggcctac
     1921 gaggcgggac tccgcacctt cttcgagggc aagaccgccg acgcggagaa gctcttcgcc
     1981 gaggcgttgg cgaaagactc ggccttcgcg atggcgcagt tctactacag tcttgccacc
     2041 tcgaacggct cccgcgccga ggtgtcgacc cggcttcagc gcgcggtgga actggcggag
     2101 cgggccagcg accgcgaacg cctgctgatc cgggcgacct gggcgttcta caactcgtca
     2161 ccctcgatcc gggcctacgc cgagaccctc actgtgcggt atcccacgga gctcgagggt
     2221 tacctgatgg cggggcaggg agcgatcctc gcggccgact tccgggctgc ccgggggccg
     2281 ctgctcgagg tgatcgaccg cgacagtctc gggctcaagg gacagacggt tcgctgcctc
     2341 gcgtgcgagg cgctggaaac cctgatcgga agcatgggtc aggaggactc gctggcggcc
     2401 gccttggcat tggcccggcg ctgggcacgg ctgcagccca attccgggaa ggcgctgcgg
     2461 taccaggcga tgctccttgg acagatgggc tatcccgact cggcgcggcg ggcgctggct
     2521 cttgccgatt cgatcgatcc gggcgccgcc aaccgctggc gctatctcac cgccctcgag
     2581 atgtggaagt tccagtatga ctcggcggcg gagctggccc gcgcggcgat gcagaccggc
     2641 tccggatccg atcgtgtcga gggctcgtgg atactcgcca ttgcctatcg caatctgggc
     2701 cggctcaacg aggcgctggt gcaggcgcgg gcttaccgta tcggcaaggc cgaccagacg
     2761 cccagaggcg cggccccact cagcgcctac ctcgaggccc aggtgctgtt cgagatgaac
     2821 cgattccgtg aatcggggct gctgttcgat tcgatcagcc gggcatcggt gcccttcgag
     2881 gattcgtcga acaccgcgcg cacctgggtc tggtccacca ctcaccgggc cagcgcactc
     2941 gcggcccagg gcgacaccag ccggctcgcc atgctggccg attcgatgca gcgggagggc
     3001 cagatcagcg ggctcgaacg cgaccggcgg ctgcatcact atgtccgcgg cctgctgttc
     3061 gcgtcgcggg gcaacgacga gcaggccgtg acggaattcc gggaggcaat cacgtcgcgg
     3121 aactccggct atacccggat caactacgaa ctggcgaggg cgctgctccg cctcaggcgg
     3181 ccacgcgagg cggtggccgt gctccagccg gtgactcggg gcatcttcga gggggcctcc
     3241 ctgtatctca cccacagtga cgcccacgag ttgctgggca aggcctggga ggcggcgggg
     3301 aacgccgaca gcgcggctta tcactaccgg ctcgtcgcca aactgtggga gaatgccgat
     3361 cccggcttca
//
LOCUS       DATIFF010001038         1422 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_592251, whole genome shotgun sequence.
ACCESSION   DATIFF010001038 DATIFF010000000
VERSION     DATIFF010001038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1422
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_592251"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..322
                     /locus_tag="VLD58_15110"
     CDS             <1..322
                     /locus_tag="VLD58_15110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55688.1"
                     /translation="SASDWPYQEREAQMLVAAGLARAGLRDSADRVLKRAETSDKTID
                     PESELVSTEALIRELMKDREGALRLLGTYLTLHPEHRTGFAQSQSWWWRDLKSDPRFQ
                     ALVR"
     gene            387..>1422
                     /locus_tag="VLD58_15115"
     CDS             387..>1422
                     /locus_tag="VLD58_15115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55689.1"
                     /translation="MRFRTSACVIAAAGLAVLACSEAPRTAPSERPLAAVTTAAPAPC
                     DATVSNQVQDDITALFRSSDRSQVKNEWSKVAKLCPSDLAAAAAEQKIYIQLTIDKFK
                     AGLALDPNGTSPPTTQELLVADWDRAANFVGEAAYGLSPTVLDANGAVGVIGAVGGDL
                     LNSVHTAGIRVNPNAIANSRLFSIAPLASCTGLQTQTNLDLFPLCFDLNVNPVTTFVS
                     PFVDVEICPVEGTPAAIMSRGHLAHPKIAELALTPSAGNNIFGWSCSNALADANLPVS
                     GGFAGALHQLAQMALGWFSPARAYAAHGGLTGKTDSFSPFGTVDPDIFLSTFSADAVG
                     LPPGPPEKGTW"
BASE COUNT          223 a          517 c          464 g          218 t
ORIGIN      
        1 ctccgcctcg gactggccgt accaggagcg ggaggcccag atgctggtgg cggctgggct
       61 ggcgcgcgcc gggctcaggg acagcgcgga ccgggttctc aagcgcgccg aaaccagcga
      121 caagacgatc gaccccgaga gcgagctggt gagcaccgag gcgctgatcc gggagttgat
      181 gaaggaccgc gagggagcgc tccggctcct cgggacgtat cttacgctcc atccggaaca
      241 ccggacgggt tttgcccaga gccagtcgtg gtggtggcgg gacttgaagt ccgatccccg
      301 cttccaggca ctggtccgat agagcaggtc gggccggctg cccggcccgt gcgagttgag
      361 ctctggttcc tcctcaggag attcgaatgc gcttccgtac ttcggcctgt gtcatcgcgg
      421 ccgccggcct ggcggtgctg gcgtgcagtg aggcccctcg caccgcgccg agcgagcgcc
      481 cgctcgctgc ggtgaccacc gccgcgcccg ccccgtgcga tgcgacggtc tccaaccagg
      541 tccaggacga catcaccgcc ctgttccggt ccagtgaccg ctcccaggtc aagaacgagt
      601 ggagcaaggt ggccaagctc tgcccgagcg acctcgccgc cgcggccgcg gagcagaaga
      661 tctacatcca gctgaccatc gacaaattca aggccggcct ggcgctggat cccaacggca
      721 cctcgccacc caccacgcag gagctgctgg tggccgactg ggaccgcgcc gcgaacttcg
      781 ttggcgaggc ggcctacggc ctctcgccca cggtgctcga cgccaacggt gcggtcggcg
      841 tcatcggggc agtcgggggc gacctcctca attcggtcca caccgccggc atccgggtca
      901 acccgaacgc gatcgcgaac agccgcctgt tcagcatcgc cccgcttgcc agctgcaccg
      961 ggctccagac ccagaccaat ctggatctgt tcccgctctg cttcgacctc aacgtgaatc
     1021 cggtcaccac gttcgtgtcg cccttcgtgg acgtggagat ctgtccggtc gagggcaccc
     1081 cggccgccat catgagtcgc gggcacctcg cccacccgaa gatcgccgag ctggccctca
     1141 ccccgagcgc cggcaacaac atcttcggct ggagctgcag caatgccctg gccgatgcca
     1201 acctgccggt gtccggtggc tttgccggcg ctttgcacca gctggcccag atggcgctgg
     1261 ggtggttcag cccggcccgg gcgtacgccg cgcacggcgg gctcaccggc aagaccgaca
     1321 gcttcagccc gttcggcacg gtagaccccg acatcttcct gtccaccttc tcggcggacg
     1381 ccgtcgggct tccgcccggc cccccggaaa aggggacctg ga
//
LOCUS       DATIFF010001039         2737 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1055148, whole genome shotgun sequence.
ACCESSION   DATIFF010001039 DATIFF010000000
VERSION     DATIFF010001039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2737
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1055148"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..701)
                     /locus_tag="VLD58_15120"
     CDS             complement(<1..701)
                     /locus_tag="VLD58_15120"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSB55690.1"
                     /translation="MSLARPWFLLLLLLPLAWWWWRRNRRPPATRYSDLRLINLVKET
                     DWLARVPMACRLLAFTSWVVAAAGPRMGGAQVEMKKEGIAIVIAVDISSSMLAEDFSP
                     SNRMEVAKQQAAAFIKGRSADRIGLVAFSGEALTQVPITVDYPVLEQAVASLRIGMLE
                     DGTAIGTGLATSVNRLREAPGKSKVILLLTDGENNRGTVDPRTAAAAASALGIRVYTI
                     GVGTEGEAPVPTGRG"
     gene            complement(698..1531)
                     /locus_tag="VLD58_15125"
     CDS             complement(698..1531)
                     /locus_tag="VLD58_15125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55691.1"
                     /translation="MLLPLLLLLQQAAPAGPTVGDTIWLERVVETPSGAEVHAAQWTP
                     AEPMGLLGHALLRREGNKTIVSYPAVAWRAGRIQVDVPGPIVIRPDGTTDSLPVESRT
                     LNIVSVLPDSVPAEKLPVQPEAGIVTERVTTPYPVLVAVLVALLIFAPLAWWWLRSGP
                     PMPGFTAGGAPVAPPLDEWNEAGEPRAVAAVAARGLRATMLSHLPGMPQGLHAGRLMR
                     VVAEQRPSWPVAELGDVLGGLEAVQYDSAPSHDVLALARRAADLQQQLQAMPARTPAQ
                     V"
     gene            complement(1534..2418)
                     /locus_tag="VLD58_15130"
     CDS             complement(1534..2418)
                     /locus_tag="VLD58_15130"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HSB55692.1"
                     /translation="MPPISPEILKQVKGIELRSRGLVTALFGGEYRSVFRGQGMEFAE
                     VRQYEHGDDFRAIDWNVSARLGHPYIKTFVEERELTLMLVVDQSGSTHFGVPRSKSAL
                     AVEVASVLALAAANTNDRVGALLFADKVERVIPPGKGRRHALRVIRDLVAFKPAGRRT
                     NLAAALTYATGLLHHRSIVVVLSDFLAEGWGQPLRQLAVRHDVVAVAVEDPRETTLPD
                     AGWLELEDAETGARRTVDTGDRQVRGRLRALAERRREERGRSFAAAGVDYVALDTGQD
                     YAPVLRRAFVQRAKRINR"
     gene            complement(2499..>2737)
                     /locus_tag="VLD58_15135"
     CDS             complement(2499..>2737)
                     /locus_tag="VLD58_15135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HSB55693.1"
                     /translation="NLKPLVAFGASPRASIALAQAAKAHAYLRGRGYVIPEDVRSMAL
                     DVLRHRVLLTFEAEAEEIDADQVVTRILDAVPVP"
BASE COUNT          423 a          957 c          969 g          388 t
ORIGIN      
        1 aacccgcggc cggtgggcac cggcgcctct ccctcggtgc cgaccccgat cgtgtatacc
       61 cggatcccca gcgccgacgc ggcggcggcg gcggtccggg ggtcgacggt gccccgattg
      121 ttctcgccgt cggtgagcag caggatcacc ttcgacttgc ccggagcctc gcggagccgg
      181 ttcaccgacg tggcgagccc ggtgccgatg gccgtgccgt cttccagcat cccgatgcgg
      241 agcgacgcca ccgcctgctc cagcaccggg tagtcgaccg taatcggcac ctgggtcagc
      301 gcctcgccgg agaacgcgac gagcccgatc cggtcggcgc tccgtccctt gatgaaggcc
      361 gcggcctgct gcttggccac ctccatccgg ttgctgggtg agaagtcctc ggccagcatc
      421 gagctggaaa tatcgaccgc gatcacgatc gcgatccctt ccttcttcat ctctacctgc
      481 gcgccaccca tccgggggcc cgcggccgcg accacccacg aggtgaacgc cagcagccgg
      541 cacgccatcg gaacccgggc gagccagtcg gtctctttca cgaggttgat gaggcggaga
      601 tcgctgtagc gggtggcggg tgggcgcctg ttccggcgcc accaccacca ggcgagcggg
      661 agcaggagaa gcaggaggaa ccagggccgg gcgagactca tacctgggcg ggcgtcctcg
      721 cgggcatggc ctggagctgc tgctggagat cggcggcgcg gcgggccagc gccagcacgt
      781 cgtggctggg agcgctgtcg tactgcaccg cctcgaggcc accgagtacg tcgcccagtt
      841 cggccaccgg ccaggagggc cgctgttccg cgacgacccg catgagccgg ccggcgtgca
      901 ggccctgcgg catgccggga agatggctca gcatcgtggc gcggagcccc cgtgcggcga
      961 cggcggccac ggcgcggggc tcgccggcct cattccactc gtcgagcggg ggcgccaccg
     1021 gtgcccctcc agcggtgaac ccgggcatcg gcggccccga tcgaagccac caccaggcga
     1081 gcggcgcaaa gatgagcaga gcgacgagca ccgccacgag cacaggatag ggtgtcgtca
     1141 cccgctccgt cacgatgccg gcttcgggct gcaccggcag cttctcggcc ggcacgctgt
     1201 ccggcagcac cgagacgatg ttcagggtac gtgactccac cggcagagaa tcggtggtcc
     1261 cgtcagggcg aatcacgatc ggtccgggaa catcgacctg aatccggcca gcccgccatg
     1321 cgacggccgg gtaggagacg atggtcttgt tgccttcgcg acgaagcagc gcgtgcccca
     1381 ggagccccat cggctcggcg ggcgtccact gggccgcatg cacctcggcc ccggagggcg
     1441 tctcgaccac ccgttcgagc cagatggtgt cgcccacggt cggcccggcg ggcgcggcct
     1501 gctggagcag gagcagaagc ggcagcagca tcgttaccgg ttgatccgct tggcgcgctg
     1561 cacgaaggcg cgccggagga ccggggcgta gtcctgcccg gtgtcgagcg ccacgtaatc
     1621 gacacccgcg gctgcgaagc tgcggccccg ctcttcccgg cgccgctcgg cgagagcccg
     1681 gagccgtccg cgcacctggc ggtccccggt atcgacggtg cggcgggcac cggtctcggc
     1741 atcctcgagc tcgagccatc cggcgtcggg aagggtggtc tcgcggggat cttccaccgc
     1801 gaccgccacc acgtcgtgcc gcaccgcaag ttgccggagc ggctggcccc agccctcggc
     1861 aaggaaatcg gagagcacga ccacgatgct ccggtgatgc agcagcccgg tggcataagt
     1921 gagcgcggcc gccaggttgg tgcgcctgcc ggccggcttg aaggccacca ggtcgcggat
     1981 cacgcggagg gcgtggcggc ggcctttccc cggcggaatg acccgttcga ccttgtcggc
     2041 gaagagcagc gcacccaccc ggtcgttggt gttcgccgcg gccagcgcca gcaccgaggc
     2101 cacctcgacg gccagggccg acttgctccg cggcacgccg aagtgggtgg agcccgattg
     2161 atcgacgacg agcatgaggg tgagctcgcg ctcttcgacg aaggtcttga tgtagggatg
     2221 gcccagccgg gcggagacgt tccagtcgat cgcgcggaag tcgtcgccat gctcgtactg
     2281 ccgcacctcg gcgaactcca tcccctgccc acggaatacc gagcggtact ctcccccgaa
     2341 cagggcggtg acgagcccgc gcgagcggag ttcgatgccc ttgacctgct tcaggatttc
     2401 gggagagatg gggggcatgg tgtgtggtcg agggtcaagg gtcaagggtt acgggctcgt
     2461 gaggcggact cgcgaccctt gacccttgac ccgtgacctc atggaaccgg caccgcatcc
     2521 agaatccggg tcaccacctg atcggcgtcg atttcctccg cctcggcctc gaaggtgagc
     2581 agcacccggt gccgcagcac gtcgagcgcc atcgagcgga catcctcggg gatcacgtag
     2641 ccgcgcccgc ggagataggc gtgggccttg gccgcctgcg ccagcgcgat cgaggcacgg
     2701 ggcgaagcgc cgaacgccac cagcggcttg agattct
//
LOCUS       DATIFF010001040         1010 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1516717, whole genome shotgun sequence.
ACCESSION   DATIFF010001040 DATIFF010000000
VERSION     DATIFF010001040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1516717"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1010
                     /locus_tag="VLD58_15140"
     CDS             <1..>1010
                     /locus_tag="VLD58_15140"
                     /inference="COORDINATES: protein motif:HMM:TIGR01494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HSB55694.1"
                     /translation="LVPADCRVLEERDLFVNEALLTGEPYPVEKRPADAALMGASVVS
                     GMARAVVCETGARTTLGEIGQSVSAAEPPTPFEIGTRRFGLFILRLAMLMVLFVILVC
                     AVRQRPWLESFLFAVALAVGLAPELLPMIVSVTLARGALRMSAQKVIVKRLAAIHDLG
                     SMSVLCTDKTGTLTEARIRLERHVDPEGRNSPRVLQLAYLNSYFESGLKSPLDEAILR
                     HEDIRTAGWTKIDEVPFGFERRRVSVLIEGAGAGAETGRMLVVKGAPEDVLRLCTRYE
                     GDSFQDLRPLDGAALAELRERFDGLSREGFRVLGIAWKPVDRTCCHAAVGDEAELVFA
                     GF"
BASE COUNT          143 a          318 c          388 g          161 t
ORIGIN      
        1 cctggtgccg gccgactgcc gggtgctcga ggagcgggat ctgttcgtca acgaggccct
       61 gctcaccggc gagccgtacc cggtggaaaa gcggccggcc gatgcggcgc tcatgggcgc
      121 gtcagtggtg agcgggatgg cgcgggcggt ggtatgcgag acgggcgcgc ggaccacgct
      181 tggcgaaatc ggccagagcg tgagcgcggc ggagccgccc accccgttcg agatcgggac
      241 ccgccggttc gggctcttca tcctgcggct cgcgatgctg atggtgctgt tcgtcatcct
      301 ggtgtgcgcc gtgcggcagc ggccgtggct ggagtccttc ctgttcgccg tggccctggc
      361 cgttgggctg gcccccgagc tgctcccgat gatcgtgtcc gtaacgctcg cccgcggcgc
      421 gctccggatg tcggcccaga aggtgatcgt caagcgtctc gcggccatcc atgatctggg
      481 gagcatgagc gtcctctgca ccgacaagac cgggacgctg accgaggcca ggatccggct
      541 ggagcggcac gtggatcccg agggacggaa cagcccccgc gtcctccagc tggcgtatct
      601 caacagctac ttcgagtccg ggcttaagag cccgctggac gaggcgatcc tccggcacga
      661 ggacatacgc acggccggct ggaccaagat cgacgaggtg ccgttcgggt tcgaacggcg
      721 acgggtgtcg gtgctgatcg agggggcggg agcgggggct gagaccggcc gcatgctcgt
      781 ggtaaagggc gcgccggagg acgtgctccg gctctgcacc cggtacgaag gggactcgtt
      841 ccaggatctc cggccgctgg acggcgccgc gctagcggag ctgcgggaac gcttcgatgg
      901 cctgagccgg gaggggttcc gggtgctggg catcgcctgg aagccggtgg accgaacctg
      961 ctgccacgcc gcggtagggg atgaagccga gctcgtgttc gccggcttcg
//
LOCUS       DATIFF010001041         2234 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_286714, whole genome shotgun sequence.
ACCESSION   DATIFF010001041 DATIFF010000000
VERSION     DATIFF010001041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2234
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_286714"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..655)
                     /locus_tag="VLD58_15145"
     CDS             complement(<1..655)
                     /locus_tag="VLD58_15145"
                     /inference="COORDINATES: protein motif:HMM:NF014658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MqnA/MqnD/SBP family protein"
                     /protein_id="HSB55695.1"
                     /translation="MTQTIHVAHSPDSDDAFMFYALAEGKIDTGNLRYVHELSDIESL
                     NRRALDGSLEVTAVSIHAYAYLADRYALLNSGSSMGDRYGPRLVSRSPAPADPRAASR
                     GKRIAVPGKLTTAYLSLRLYQPEFEAVITPFDQIEDAVLAGKVDLGLLIHEGQLTYQD
                     QGLHLWADMGEWWFGETGFPLPLGGNVVRRDLGPAVVAQVARDLKASIVYALEHRKPA
                     "
     gene            complement(669..1370)
                     /locus_tag="VLD58_15150"
     CDS             complement(669..1370)
                     /locus_tag="VLD58_15150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HSB55696.1"
                     /translation="MTTTAPASTSCPSCHASLTPGARYCHRCGRAVGAASDRGIWITA
                     WGVVILFIGFIAWWVNSRSAAPTGPDMANAGNANPAEAAGARPQGSPPDISQMSPRER
                     FLRLHDRVMNAQEQGDTATAQRFAPMAISAYGMLDATDIDARYHAGALYILTRAYPQA
                     LALADTIQAEAKNNLMADLLRIEVAQARKDAAAEARARKAFLANFDDQVGLKRPEYEE
                     HKAMLDDLRKQLATP"
     gene            1478..1753
                     /locus_tag="VLD58_15155"
     CDS             1478..1753
                     /locus_tag="VLD58_15155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55697.1"
                     /translation="MAQPQQPPPVPLPDAPAARHLGDLARSQTRWSVYLETRVAGTLA
                     QGRLHFVEGTRHKSTGWIFREWTEREIHDRFNEFSPVELWKILESLG"
     gene            1782..>2234
                     /locus_tag="VLD58_15160"
     CDS             1782..>2234
                     /locus_tag="VLD58_15160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase beta-grasp
                     domain-containing protein"
                     /protein_id="HSB55698.1"
                     /translation="MPPTRPSILEFPRQLGGATKGDVAKLASEFQVDFLRLQFTDILG
                     INKNVEVPRSQFAKALDGEIMFDGSSIEGFVRIEESDMLLVPDLSTFRILPMDDEGGR
                     VARLLCDIFTPDHQPFAGCPRLTLKRQIARARSLGFTMMAGCEVEFFPL"
BASE COUNT          335 a          711 c          820 g          368 t
ORIGIN      
        1 gggccggctt ccggtgctcg agggcgtaga cgatgctcgc cttgaggtcg cgggccacct
       61 gggccaccac ggccgggccg agatcgcgcc gcaccacgtt gccgccgagc gggagcggga
      121 agccggtctc gccgaaccac cactcaccca tgtcggccca gaggtggagc ccctggtcct
      181 gataggtcag ctggccttca tggatcagga ggccgaggtc gaccttgccc gccagcacgg
      241 cgtcctcgat ctggtcgaag ggagtgatca cggcctcgaa ctcgggctga tagagccgga
      301 gggagaggta ggcggtggtc agcttgccgg gcaccgcgat ccgtttgccg cgcgaggcgg
      361 cgcggggatc ggccggtgcg ggcgagcggg agaccagccg gggaccgtac ctgtcgccca
      421 tgctggagcc ggagttgagc agcgcgtacc tgtcggccag gtacgcgtat gcatggatcg
      481 acacggcggt cacctcgagg ctcccgtcga gcgcccggcg attcagcgat tcgatatcgg
      541 agagctcgtg gacgtagcgg aggttgccgg tatcgatctt cccttccgcg agcgcgtaga
      601 acatgaacgc gtcatcggag tcggggctgt gggcgacgtg gatggtctgg gtcatggcgg
      661 gtacggcgct agggagtggc gagctgcttg cgcaggtcgt cgagcatggc cttgtgctcc
      721 tcgtactccg ggcgcttgag gccaacctgg tcgtcgaagt tggcgaggaa ggccttgcgg
      781 gcgcgggcct cggcggcggc gtccttcctg gcctgggcca cctcgatgcg cagcaggtcg
      841 gccatgaggt tgttcttcgc ctcggcctgg atggtgtccg ccagggcgag ggcctgcggg
      901 taggcgcggg tcaggatgta gagcgccccg gcatgatagc gcgcgtcgat gtcggtggcg
      961 tcgagcatgc cgtaggcgga gatcgccatc ggcgcgaagc gctgggcggt ggcggtgtcg
     1021 ccctgttcct gggcgttcat cacccggtca tgcagccgga ggaagcgctc ccgcgggctc
     1081 atctggctga tatccggcgg ggagccctgc ggtctggcgc cggcagcctc ggccgggttg
     1141 gcgttgccgg cgttcgccat gtcggggccg gtcggggcgg cggagcggct gttcacccac
     1201 cacgcgatga agccgatgaa cagaatcaca acgccccagg ccgtgatcca gatgccgcga
     1261 tccgaggcgg cgccgaccgc gcggccgcag cggtgacagt acctggcgcc gggcgtgagc
     1321 gaggcgtggc aggaaggaca ggaggtcgat gctggcgcgg tggttgtcat ggggcgggga
     1381 atctaggcgg tcgggatggt gggcagaagc tcggccctcg gggaaccctt ccccctcata
     1441 gtgggcccga ttagcctcca tacaacccgg aggattcatg gcccagccgc agcagccacc
     1501 gccggttccc cttcccgatg cgcccgcggc ccgtcacctg ggcgatctgg cccgcagcca
     1561 gacgcggtgg agcgtgtacc tcgagacccg cgtggcgggg accctggcgc aggggcgact
     1621 gcacttcgtg gaaggcaccc gccacaagag caccgggtgg atcttccgtg agtggaccga
     1681 gcgcgagatc cacgaccggt tcaacgagtt cagtccagtc gagttgtgga agatcctcga
     1741 gagcctgggg taacccggtt cccggtccct aacagcccgt catgccgccc acccgcccgt
     1801 ccattctcga gttcccccgc cagctgggcg gcgccaccaa gggcgatgtc gccaagctgg
     1861 cgtccgagtt ccaggtcgac ttcctgcggc tgcagttcac cgacattctc ggcatcaaca
     1921 agaatgtcga agtgccgcgg agccagttcg ccaaggcgct cgacggcgag atcatgttcg
     1981 acggctcctc gatcgaaggc ttcgtccgga tcgaggagag cgacatgctg ctggtgccgg
     2041 atctgtcgac cttccggatc ctgccgatgg acgacgaagg gggccgggtg gcgcggctcc
     2101 tgtgcgacat cttcaccccc gaccaccagc cctttgccgg ctgtccccgc ctgacgctca
     2161 agcgccagat cgcccgggcc aggagcctgg ggttcacgat gatggcgggg tgcgaggtgg
     2221 agttcttccc cctt
//
LOCUS       DATIFF010001042         2292 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1362345, whole genome shotgun sequence.
ACCESSION   DATIFF010001042 DATIFF010000000
VERSION     DATIFF010001042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2292
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1362345"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(84..1640)
                     /locus_tag="VLD58_15165"
     CDS             complement(84..1640)
                     /locus_tag="VLD58_15165"
                     /inference="COORDINATES: protein motif:HMM:TIGR00924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HSB55699.1"
                     /translation="MATAAAPTSAEPIGTPADTGFFGHPRGLSTLFFTEFWERFSYYG
                     MRAILILFMTAPLAVGGLAFDTAKAGVIYGTYTALVYVTALPGGWLADRFFGQRRATL
                     YGGVLIMLGHICLAVPSLGSFYLGLGFIVFGTGLLKPNVSTMVGQLYGAEDGRRDAGF
                     SIFYIGINLGALVSPFVCGWLAQSPRFRGILHALGLRPETAWHWGFAAAAVGMLFGIL
                     QYLSGWKYLGDAGMNPVVPDDPAEQARNRRRLRNGVVGLVALAAGITVAGRLGIIHVT
                     PEGLGNAFGVGLVAVTVLFFAGLLGARGWTSGERKRLITILVLFLAAAIFWSVFEQAG
                     STLNLFAERSTDNRLFGVGFPASWFQSAEPIFIVLLAPVFAWLWVRLGKRDPSSPAKF
                     TIGLVFVAAGFGILVIAARLGATGIKVSPLWLIATYFLETIGELCLSPVGLSAMTKLA
                     PARVAGLMMGVWFLASAVGNYLGGRVAGLYEAFSLPSLFGAVALYALAAAVGMALLVK
                     PIARMLGSEK"
     gene            complement(1652..>2292)
                     /locus_tag="VLD58_15170"
     CDS             complement(1652..>2292)
                     /locus_tag="VLD58_15170"
                     /inference="COORDINATES: protein motif:HMM:NF018024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1028 domain-containing protein"
                     /protein_id="HSB55700.1"
                     /translation="GALTFDWAGGRVGSPSGPGSLAGDKGAMIVGRTFAAQANIMVSD
                     RTVANMAATFEHSAGSLADRLFAALQAGQAGGGDKRGMQSAALLVVRKDAGYLGSSDR
                     FIDIRVYDAPDPIAELGRLLALHKLYFFPTDPKDLIDITPDVVRRLEPILLREPVNQP
                     TKWLAAPQGRATRAFLGALRNFMYWENYDVRVRMDGKIDRIVLDDILKNHRT"
BASE COUNT          400 a          819 c          771 g          302 t
ORIGIN      
        1 agaagtgaga agtgagaagt gagaagtgag aggtgagaag ggggcgcgat tcttctccct
       61 tctcactttc tacctcatac ttctcacttc tcactcccca gcatcctcgc gatcggcttc
      121 accagcagcg ccatccctac cgccgcggcc agcgcgtaca gcgccaccgc gccgaacagg
      181 ctcggcagcg agaacgcctc gtacaggccc gccacccgtc cgcccaggta gttccccacc
      241 gccgacgcca ggaaccagac gcccatcatg agccccgcca cgcgggccgg cgcgagcttg
      301 gtcatggcgc tcaggccgac cgggctgaga cacagctcgc cgatggtctc cagaaagtag
      361 gtcgcgatga gccagagcgg gctcaccttg atccccgtcg cccccagcct ggccgcgatg
      421 acgaggatgc cgaaccccgc ggcgacgaac accagcccga tcgtgaactt cgccgggctc
      481 gacgggtcgc gcttcccgag ccgcacccag agccacgcga acaccggggc gagcagcacg
      541 atgaagatcg gctcggccga ctggaaccag ctggcgggga atcccacgcc gaacagccgg
      601 ttgtcggtgc tccgctcggc gaagagattg agggtcgagc ccgcctgctc gaacaccgac
      661 cagaagatcg ccgccgcgag gaagagcacg aggatcgtga tcagccgctt ccgctccccg
      721 ctggtccacc cgcgcgcgcc caggagcccc gcgaagaaga gcacggtcac ggccaccagg
      781 cccaccccga aggcgttccc cagtccctcg ggcgtgacgt ggatgatccc gagccgcccc
      841 gccaccgtga tgcccgcagc gagcgccacc aggccgacga ccccgttccg gaggcggcga
      901 cgattgcgcg cctgctccgc cggatcgtcg ggcaccaccg ggttcatgcc ggcgtcgccg
      961 agatacttcc agccggagag gtactgcagg atgccgaaga gcatccccac cgccgccgcc
     1021 gcgaagcccc aatgccacgc cgtctccggc cgaagcccca gcgcgtggag gatcccgcgg
     1081 aacctggggc tctgcgcgag ccagccgcag acgaacggcg acaccagcgc gccgagattg
     1141 atgccgatat agaagatcga gaagccggcg tcccggcgtc cgtcctcggc gccgtacagc
     1201 tggccgacca tggtgctcac gttcggcttg agcagcccgg tgccgaagac gatgaagccg
     1261 aggcccaggt agaagctgcc cagactgggg acggcgaggc agatgtggcc gagcatgatc
     1321 agcaccccgc cgtacagggt cgcgcgacgc tggccgaaga aacggtcggc gagccagccg
     1381 cccggaagcg ccgtcacgta gaccagcgcc gtgtaggtgc cgtagatcac gccggccttg
     1441 gcggtgtcga atgcgagccc gccgaccgcg agcggcgccg tcatgaacag gatgaggatg
     1501 gcccgcatcc cgtagtagct gaaccgctcc cagaactcgg tgaagaagag cgtcgacagc
     1561 ccgcggggat ggccgaagaa gccggtgtcg gcgggggtgc cgatgggctc ggcgctggtc
     1621 ggggcggcgg cggtggccaa gcgatcgctc ctcaggttcg atggttcttc aggatgtcgt
     1681 ccagcacgat tcggtcgatc ttgccgtcca tccggacccg gacgtcgtag ttctcccagt
     1741 acatgaagtt ccgcagcgcc ccgaggaacg cccgggtggc gcgcccctgc ggcgccgcca
     1801 gccacttcgt gggctggttg accggctccc ggagcaggat cggctcgagc cggcgcacga
     1861 cgtcgggcgt gatgtcgatc aggtccttcg ggtccgtggg aaagaagtac agcttgtgca
     1921 gcgcgagcag ccggccgagc tcggcgatgg ggtcgggcgc gtcgtagacc cggatgtcga
     1981 tgaagcgatc gctcgagccc aggtacccgg cgtccttccg caccaccagg agggccgccg
     2041 actgcatgcc ccgcttgtcg ccgcccccgg cctggcccgc ctggagcgcg gcgaacagcc
     2101 ggtcggccag ggaccccgcg gagtgctcga acgtcgccgc catgttggcg acggtgcggt
     2161 cggagaccat gatgttcgcc tgggccgcga acgtgcggcc gacgatcatg gcgcccttgt
     2221 ctccggcaag gctccccggc cccgacgggc tccccacccg gccaccggcc cagtcgaacg
     2281 tcagcgcgcc gg
//
LOCUS       DATIFF010001043         4105 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1978495, whole genome shotgun sequence.
ACCESSION   DATIFF010001043 DATIFF010000000
VERSION     DATIFF010001043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4105
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1978495"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1720)
                     /locus_tag="VLD58_15175"
     CDS             complement(<1..1720)
                     /locus_tag="VLD58_15175"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HSB55701.1"
                     /translation="MKRAALGLAIALLGLTSRLAAQVPLDSVPPDSLLRDTVNTTEKY
                     LKAQAKNSILLPVLPLVGEAGPLPVASRIVLDRDSLDWALAETVGDLLQRVPGVYLWR
                     GGWLGRTEYPNYRGRGPASVEYFVDGLPYLPLGPDSLGIDPSYFSLSQFERMEIEKFP
                     GSLRVRLFSRRHSSQAPGSRVGITSGDKSIARYVGALEYRFPVGIGFSLGGERMVAPT
                     ATGASSDFDITNARIALDFVPSSRFGVEAQLITSSPDRKAFVQADTIELPLKGTRNDA
                     HLRAYWRSRKDEMGLRVDGLVGLTTWRGDGPNDEIRQGGLVVGWRVPRFGLTVRGFNR
                     SHYTPIDLSAEAGWSPLGIFTTSAEVGYQTHDLHRTSKWATGRAGLGLPLGFQFTAMA
                     RVGKVVATPTLLSDQAQDLREWQATAGWQRRWFGVQAGLAHTGAWRPQAYRSFTPSID
                     SIAGGPATDWVTLNWRLQPKQWFTLEGWYSDPRGASTPEGLPATHSMTSATIRSKFWR
                     SFPSGIFDFKAQVAYETWGDGVIGRAPGGQAVKLDGASFWRTMIEIRLDSFVLYWDRY
                     NLQASRK"
     gene            complement(1720..3207)
                     /locus_tag="VLD58_15180"
     CDS             complement(1720..3207)
                     /locus_tag="VLD58_15180"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF002074.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0019538 - protein metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HSB55702.1"
                     /translation="MAFTSSVLAQAPAGYSTPLLAVVVPAGGLPVSLAALDQQAGGAL
                     GRLYSSGDFGGKKDETAMIYPSGPAARILLIGVGKAEDVTRTVLRRAAATAGKRARTA
                     GVPSIALFPSPEALTVTTPRDAGQVLAEGLGFGVWFYNELKLPPEEKKPELERGVILA
                     PAETAAIDSGHTVGAAIAAGQTVTRGLQVLPGNTCTPTFLGRQAEDLARRHGHSVTVL
                     DLAAIKKEKMGGLMAVAQGSAEEPRFIVLEYKGAPGAPVVLVGKGVTFDTGGISIKPA
                     DKMEDMKYDMSGAAAVLGTFEMLGRLKPKVHVVGLIPTTENMPSGTAVKPGDVIQTHF
                     GKSIEIINTDAEGRLILCDALSYARKFEPACVVDAATLTGAVVVGLGPIASGLMGNDD
                     ALIEEVRQAGERSGERVWQLPLWDEYREMIKSDIADVKNSAGRPAGTITAAWFLREFV
                     SGYAWAHVDIAGTAYSDREDPTRVKGPTGNCMRLFAELVLGRAGK"
     gene            complement(3271..>4105)
                     /locus_tag="VLD58_15185"
     CDS             complement(3271..>4105)
                     /locus_tag="VLD58_15185"
                     /inference="COORDINATES: protein motif:HMM:NF012506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HSB55703.1"
                     /translation="ATLAAIALEHPVKVPPNRDDALAQAYRLLGVTPTIVAAWHRLRS
                     GQRPVLPRKSLGFAENFLSMVLGAPPPASAVKALDVALILRADNELNPSTFAARVTAA
                     TGADVFGCVLAGMSALAGPRHGWHTRNVMAALEEIGAPEQVGDWVKERLARKAKIAGF
                     GHQVYQGEDPRTGLLRGLAEAECQRAGLWPLFKTARELELTVHRETGQHPIVDFYLAP
                     LYRAIGFPADLFTAIFAVSRMSGWAAHVLEQYGDDRLLRPRAEYIGPVDLEYRPIRKR
                     R"
BASE COUNT          663 a         1429 c         1376 g          637 t
ORIGIN      
        1 gcttgcggct ggcctgcagg ttgtagcggt cccaatagag gacgaagctg tccaggcgga
       61 tctcgatcat ggtgcgccag aaggaggcgc catcgagctt cacggcctgc ccgccgggag
      121 cccgcccgat cactccgtca ccccaggtct cataggcaac ctgggccttg aaatcgaaaa
      181 tgccgctcgg gaagctccgc cagaacttgc tccggatggt ggcgctggtc atcgagtggg
      241 tcgccggcag gccctcgggt gtgctggctc cgcgcgggtc gctgtaccac ccctcgagcg
      301 tgaaccactg cttgggctgc agcctccaat tgagcgtcac ccaatcggtg gcaggacctc
      361 ccgcgatcga gtcgatgctc ggcgtgaagc tccgatacgc ctgcggccgc caggcaccgg
      421 tgtgggcaag gcctgcctgc acaccgaacc agcggcgctg ccagccggcc gtcgcctgcc
      481 actcgcgaag gtcctgggcc tggtcactga gcagcgtggg cgtcgccacc accttgccga
      541 cccgggccat cgccgtgaac tggaatccca gcggcagtcc cagcccggcg cgcccggtgg
      601 cccacttgct ggtgcgatgc aagtcgtggg tctggtagcc cacttccgcc gaggtggtga
      661 agatgcccag cggactccat cccgcctcgg ccgagagatc gatcggggtg tagtgcgacc
      721 ggttgaagcc gcggaccgtc agaccgaacc gggggacccg ccatcccacc accagaccgc
      781 cctggcggat ctcgtcgttg gggccgtcgc cgcgccaggt ggtgagcccg accagcccgt
      841 cgacccggag ccccatttca tccttccgcg agcgccagta ggcccggagg tgggcatcgt
      901 tgcgcgttcc cttgagcggc agttcgatgg tatcggcctg gacgaacgcc ttccggtcgg
      961 ggctcgacgt gatgagttgg gcttccaccc cgaaccggct gctgggcacg aagtcgagcg
     1021 caatccgcgc attggtgata tcgaaatcgc tggacgcccc ggtcgctgtg ggagccacca
     1081 tccgctcgcc gccgagcgag aagccgatgc cgacgggaaa gcgatactcg agggcgccga
     1141 catagcgcgc gatgctcttg tcgcccgagg tgattcccac ccgcgaccct ggcgcctggc
     1201 tcgagtggcg gcgggagaag agccggaccc ggagtgaccc cgggaacttc tcgatctcca
     1261 tccgttcgaa ctggctgagc gagaagtacg acggatcgat cccgaggctg tcgggaccga
     1321 gcggcaggta ggggagaccg tcgacgaagt attccaccga cgccggacca cggccccggt
     1381 agttgggata ctcggtgcgg cccagccagc cgccacgcca gagatatacg ccgggcaccc
     1441 gctgaagcag gtcgcccacc gtctcggcca gcgcccagtc gagcgagtcg cggtcaagta
     1501 cgatccggct tgcaaccgga agcggccccg cctcgcccac caggggaagg accggaagca
     1561 ggatcgagtt cttggcctgg gccttgaggt acttctccgt cgtgttgacg gtgtcgcgaa
     1621 gcagcgaatc cggcggcact gaatcgagcg gaacctgggc cgcgagccgc gacgtcaggc
     1681 cgagcagagc gatagcgagg ccgagggcgg cacgcttcac tacttccccg cccgtcccag
     1741 caccagctcg gcgaaaaggc gcatgcagtt gccggtcggg cccttcaccc gggtggggtc
     1801 ctcgcgatcg ctgtacgcgg tgccggcaat gtccacgtgc gcccaggcgt agcccgacac
     1861 gaattcgcgg aggaaccatg cggcggtgat cgtccccgcc gggcgccccg cggagttctt
     1921 cacgtcggcg atgtccgact tgatcatctc gcggtattcg tcccagagcg gcagctgcca
     1981 gacgcgctca cccgagcgct cgcccgcctg gcgaacctcc tcgatcagcg catcgtcgtt
     2041 tcccatgagc cccgaggcga tcggacccag cccgaccacc accgcgccgg tgagcgtggc
     2101 ggcgtccacc acgcacgccg gctcgaactt gcgcgcatac gagagcgcgt cgcacaggat
     2161 gaggcgtccc tcggcgtcgg tattgatgat ctcaatgctc ttcccgaagt gggtctggat
     2221 cacgtcgccg ggcttcaccg cggtgccgct gggcatgttc tccgtggtgg ggatgagccc
     2281 gaccacatgc accttgggct tgagccggcc cagcatctcg aaggttccca gcaccgcggc
     2341 cgccccggac atgtcgtact tcatgtcttc catcttgtcg gccggcttga tcgagatgcc
     2401 gccggtgtcg aaggtgacgc ccttccccac cagcaccacc ggcgcccccg gcgccccctt
     2461 gtactccagc acgatgaagc gcggctcctc ggcgcttccc tgcgccaccg ccatgagccc
     2521 acccatcttc tccttcttga tggcggcgag gtcgagcacc gtcacgctgt gaccgtggcg
     2581 cctggcaaga tcctcagcct gccttccgag aaacgtcggg gtgcaggtat tgccgggtag
     2641 cacctggagg ccgcgagtaa cggtctggcc cgcggcaatc gcggctccca ccgtgtgacc
     2701 gctgtcgatg gccgcggttt cggccggtgc gaggatgacg ccgcgctcca gctcgggttt
     2761 cttctcttcc gggggcagct tgagttcgtt gtagaaccag acgccaaacc cgaggccctc
     2821 ggccaggacc tggccggcat cgcgcggggt ggtgacagtg agggcttctg gcgatgggaa
     2881 cagcgcgatc gacggcacgc cggcagtgcg ggcccgcttg cccgcggtcg cggccgcacg
     2941 ccggaggacg gtgcgagtca catcctcggc cttgcccacc ccgatgagca ggatccgcgc
     3001 ggcggggccc gaggggtaga tcatggccgt ctcgtccttc ttgccgccga agtcgcccga
     3061 gctgtagagt cgcccgagcg cgccgccggc ctgctgatcc agcgcggcaa gcgagacggg
     3121 caaaccgccg gccggaacta ccaccgcaag caggggagtc gagtagccgg caggggcctg
     3181 cgcgagaacc gacgaggtga aggccatggc gggaatggga gtcgcgagta gcggttgggg
     3241 actggtgccc gggcgaaaat cgatatccga ctagcggcgt ttgcggatcg gccggtattc
     3301 gagatccacc ggtccaatat actccgccct gggccggagc agccggtcgt cgccgtactg
     3361 ctcgagaaca tgggctgccc atccactcat ccggctgacg gcgaagatcg cggtgaagag
     3421 atcggcggga aaaccgatcg cccggtagag cggcgccagg tagaagtcga cgatcgggtg
     3481 ctggccggtc tcccgatgca cagtcagctc gagctcccgg gccgtcttga acagcggcca
     3541 gaggcccgcc cgctgacact cggcctccgc caggccccga aggagcccgg tgcgcgggtc
     3601 ttcgccctga tacacctggt gcccgaagcc cgcgatcttc gccttccgcg caaggcgctc
     3661 cttcacccag tcgcccacct gctccggcgc cccgatctcc tccaacgcgg ccatcacatt
     3721 gcgggtatgc cacccgtggc gcggtccagc cagcgccgac atccccgcca gcacgcagcc
     3781 gaatacatcg gccccggtcg cggcggtcac ccgcgcggcg aaggtcgagg gattgagttc
     3841 attgtcggcc cggaggatca gggcgacatc cagcgccttc accgccgaag ctggcggcgg
     3901 agctcccagc accatggaca ggaaattctc cgcgaagccc aggctcttcc ggggaaggac
     3961 gggccgctgc ccgctccgga gccggtgcca cgccgcgacg atcgtgggtg tgactcccag
     4021 cagccggtag gcctgagcca gcgcatcgtc ccggttaggc ggcaccttga ccggatgctc
     4081 cagcgcgatc gcggcgaggg tcgcg
//
LOCUS       DATIFF010001044         2936 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1517478, whole genome shotgun sequence.
ACCESSION   DATIFF010001044 DATIFF010000000
VERSION     DATIFF010001044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2936)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2936)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2936
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1517478"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..274
                     /locus_tag="VLD58_15190"
     CDS             <1..274
                     /locus_tag="VLD58_15190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55704.1"
                     /translation="EAGADINARDTRFGATPAGWAIEYLRQRGALLAIEIEDAARAIG
                     EGNVPLTRLYLRRFPALRAAATADGTPLRLQARSSGNPELARLFEE"
     gene            289..936
                     /locus_tag="VLD58_15195"
     CDS             289..936
                     /locus_tag="VLD58_15195"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025033.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSB55705.1"
                     /translation="MTSCHCCATDQQFDRRIADRDLRRFLRRGPDPATRQLLTAVQQC
                     TLPSHPTLLDIGGGIGIVHHTLLDCGFGQAIQIDASQAYLAVASTEAARRGHADRVTF
                     THADFRTVAATTPAAAVVTLDRVVCCDPDYVGLLGSAADHAKRLLAFTYPRARWYTRL
                     FVATMNGWRRLLGHPFRAYIHPPAAMRAVLEDRGLRRRWTGATWIWHADLFERAG"
     gene            1013..1600
                     /locus_tag="VLD58_15200"
     CDS             1013..1600
                     /locus_tag="VLD58_15200"
                     /inference="COORDINATES: protein motif:HMM:NF023113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2380 domain-containing protein"
                     /protein_id="HSB55706.1"
                     /translation="MLRFPAIPILTAAIVALPRADLAAQGTGPEPATAAVAVLPAALY
                     NDQANLREASDSDQAVLATEVLRSRLVERLGDLVVSYRRVDSLARSPEAMAIAGGVPC
                     QVKVACARAVAAGAGARWVVMAKVSKTSSLIWLLSAQLIRVSTGEIVLDDSTELKGDP
                     GTMVRVGVRSFADRVARTVRAGGRTTNFPSGSPGS"
     gene            1666..2109
                     /locus_tag="VLD58_15205"
     CDS             1666..2109
                     /locus_tag="VLD58_15205"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB55707.1"
                     /translation="MSAEIRILGPADRGLLSKVAPEVFDHDLDPALTEEFLGDPRHHL
                     AAAIEAGIVVGFASAVHYVHPDKPPELWINEVGVAPSHRRQRLAQQLLQALFDLGHRL
                     GCHEAWVLTSPANQGAMRLYEAVGGRRMTDPPAMFTFRLDQPASK"
     gene            2106..2660
                     /locus_tag="VLD58_15210"
     CDS             2106..2660
                     /locus_tag="VLD58_15210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55708.1"
                     /translation="MREHTPSACLHPAGTRSHQRQARAVRRPGRRAGASPGSEIVRLA
                     VATALITGPLQAQRPVQPGVVRELQALAGAYPLLAATEYPPDSAVLIFEDSSLAPDHQ
                     RPGQWMFGPPVTEEEAAGCPPPKVLGRKLARLLYRRTGKAAPLKTIVVEVKAPAPFGQ
                     NRARMYYYLQELQEPWAGDRDSPP"
BASE COUNT          446 a         1062 c          945 g          483 t
ORIGIN      
        1 ggaagccgga gccgatatca acgcccgcga tacgcgtttc ggcgcgactc cagcgggctg
       61 ggcaatcgag tatctccgac agcgcggcgc actgctggcc atcgagattg aagatgccgc
      121 cagggccatc ggcgagggga atgtgccctt gacacggctc tacctgcgac ggtttccagc
      181 actgcgcgca gcggccacgg ccgacgggac gccattgaga ctgcaggccc ggagctcagg
      241 gaatccggag cttgcgcgtc tgttcgagga gtaggaggct gctacgggat gacttcctgt
      301 cactgctgtg ccaccgacca gcaattcgac cgacgcatcg ccgaccgcga cctccggcgg
      361 tttctccggc gcggcccgga ccccgccact cggcagctcc tgaccgcggt gcagcagtgc
      421 accctgcctt cccatccgac gctcctcgat atcggcggcg ggatcggcat cgttcaccac
      481 acgctgctgg attgcggctt cggccaggcc attcagatcg acgcgtccca ggcctacctg
      541 gccgtcgcct cgaccgaggc tgcccggcgc ggccacgcgg atcgcgtcac gtttacccac
      601 gccgacttcc ggacggtcgc tgcgactaca cccgccgccg cggtcgtgac gctggaccgg
      661 gtggtctgct gcgacccgga ttatgtcggg cttctcggga gcgccgccga tcacgccaag
      721 cggttgctgg cgttcaccta cccccgcgcc cggtggtaca cccgcctctt cgtcgccacg
      781 atgaatggct ggcggcgcct gctcggtcac ccgttccgcg cctacatcca tccaccggct
      841 gccatgagag ccgtcctcga ggaccgcggc ctgcgccggc gctggaccgg cgccacgtgg
      901 atctggcacg cggacctgtt cgaacgcgca ggctgatccg cgcatcggag ctctcggcga
      961 tcggtcatcc gatttcttcc gcctcgtcgg cctggtcgag ctatattctc gcatgcttcg
     1021 tttcccggcc atcccgattc tgaccgccgc aattgtcgcc ctcccgaggg ccgatctggc
     1081 ggcccagggg accggcccgg agcccgccac ggccgccgtc gcggttctcc ccgccgccct
     1141 ctacaacgat caggccaacc ttcgggaggc cagcgactcc gatcaggcgg tcctggccac
     1201 cgaggtgctc cgttcccgcc tcgttgagcg cctgggggac ctggtggtct cctacaggcg
     1261 ggttgattcc ctggcccgct cgccggaggc catggcgatc gcggggggcg tcccctgtca
     1321 ggtcaaggtg gcctgtgcgc gagccgtggc cgcgggggcg ggagcccgat gggtagtgat
     1381 ggccaaggtc agcaagacca gcagcctcat ctggctgctc tcggcacagc tcatccgggt
     1441 cagcaccggt gagatcgtcc tcgatgactc gacggaactc aagggtgacc cgggcacgat
     1501 ggtacgggtc ggagttcgga gctttgcaga ccgggtggcc cgaaccgttc gggctggcgg
     1561 ccgcacgacc aactttccca gcggcagccc gggctcctga gccgccctgg atgcagcaat
     1621 ccctgaccgt agagcaggtg caggccatct tcgaggacaa ataccatgag cgccgagatt
     1681 cgcattctgg gcccggccga caggggcttg ctctccaagg ttgcgcctga ggtcttcgat
     1741 cacgacctgg accccgcgct caccgaggag tttctgggcg acccacgcca ccatctggcg
     1801 gccgcgatcg aggcgggcat cgtcgtgggc ttcgcctcgg cggtccatta cgtgcacccc
     1861 gacaaacctc ccgagctgtg gatcaacgaa gtcggagtcg ccccgtcaca ccgcaggcag
     1921 aggctcgccc aacagctgct gcaggcgttg ttcgacctcg ggcatcgcct cgggtgtcat
     1981 gaggcctggg tgctcacgag ccccgcgaac cagggcgcca tgcggctcta cgaggcggtt
     2041 ggcggccgca ggatgacgga tccgccggcg atgttcacat tccgcctgga ccagcccgcg
     2101 tcgaaatgag ggagcacacc ccgagtgcat gccttcaccc ggcgggaacc cgcagccacc
     2161 agcggcaggc ccgcgcagtc cgccggcccg ggcgccgagc cggcgcgtcg cccggttcgg
     2221 agatcgtacg gctggccgtc gccaccgccc tcatcaccgg cccgctgcag gcccagcggc
     2281 cggtccagcc gggggtcgtt cgcgaactgc aggcgcttgc cggggcgtat cctctcctcg
     2341 ccgcgacgga gtacccaccc gattcagcgg tcctgatctt cgaggactcc tccctcgcac
     2401 ccgatcatca gcgccccggc caatggatgt tcggaccacc ggtcacggaa gaggaggcag
     2461 ccgggtgccc gccgccgaag gtgctgggcc gcaagcttgc ccgcttgctg taccgtcgca
     2521 cggggaaggc ggccccgctc aagaccatcg tcgtcgaggt gaaggctccc gcgcccttcg
     2581 gccagaacag ggcgcggatg tactactatc tccaggaatt gcaggagccc tgggcgggtg
     2641 accgcgacag tccgccgtga gcaccagcct cggctgactc ggccggctgc tgcgatttct
     2701 ttcggacagt tcgcgagccg ccagtggcgt cgcctgcccc tcctcccccg ctcgaccggt
     2761 ccttgggtgc tcatctcacg gccagcggta ctgcctgcaa tccactgaaa ccacgcaatc
     2821 gcgatggccg ttctgtgcat gccaccgatc cccatcgtcg ccaccccacc aaagggcaag
     2881 gacaatccat gatctgccgt atctggcatg gctggacgac gcctgcgaat gccgat
//
LOCUS       DATIFF010001045         1777 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1210150, whole genome shotgun sequence.
ACCESSION   DATIFF010001045 DATIFF010000000
VERSION     DATIFF010001045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1777
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1210150"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(14..1342)
                     /locus_tag="VLD58_15215"
     CDS             complement(14..1342)
                     /locus_tag="VLD58_15215"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSB55709.1"
                     /translation="MSPSSALRHIRHAALTVALLGFPAGPAAGQAAGAPTRILIHAGQ
                     LVDGLADRPASDQGILVEGNRVTSVGPWPQMEAAAGDARRIDLSGMTVLPGLIDNHTH
                     ILLQGDITATDYDDQLLKESIPYRTIRATVGVRTALLNGFTTMRDLETEGAMYADVDV
                     RNAINRGIIPGPRLFVATRAFSATGMYPLSGYSWELRVPEGVQIVDGVDNIRKAVREQ
                     VKYGADWIKVYADRRYYLGQDGRLHSWVNFTDEEFKAFVDEAHRLGRKIAAHAIGWDG
                     IDAALRAGFNTIEHGDGLTPDLIDRMVRQKVYWCPTIFVGAYVAEGRGGIWPKMVDIE
                     RQAFGEALKRGLLPYISYGTDAGGYAWTENQAQELAYMVRYGMTAMQAIRSATSTAAR
                     LLDQQDNLGAVAPGHFADLIAVAHDPLADITELQRVRFVMKGGVVYKDER"
     gene            1396..>1777
                     /locus_tag="VLD58_15220"
     CDS             1396..>1777
                     /locus_tag="VLD58_15220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55710.1"
                     /translation="MRDIPVPGRKGKAVRAATAAVLLVASIPSPTDEGPRYHPLQLDC
                     AGYRQQAQSSILLVAGRQRSRERTGRDGVLVLRAARADSSIRLEAWFDTLSLWREGSG
                     ERLEPDTDGLIGGRYRGLLTPFGSF"
BASE COUNT          263 a          575 c          636 g          303 t
ORIGIN      
        1 ggtccgtgcc agctcagcgc tcgtccttgt agactacccc gcccttcatc acgaatcgca
       61 cccgctgcag ctcggtgatg tcggcgagcg ggtcgtgggc cacggcaatc agatcggcga
      121 agtgcccggg ggctaccgcg ccgaggttgt cctgctggtc gagcagccgg gcggcggtgc
      181 tggtggcgga gcggatggcc tgcatcgctg tcatgccgta gcggaccatg taggccagct
      241 cctgagcctg gttctcggtc caggcgtagc cgccggcgtc ggttccgtag gagatgtagg
      301 gcagcagccc gcgcttgagg gcctcgccga aagcctgccg ctcgatgtcc accatcttgg
      361 gccagatgcc gccgcgcccc tcggccacgt atgcccccac gaagatggtc gggcaccagt
      421 agaccttctg gcgcaccatc cggtcgatca gatcgggagt caggccgtcg ccatgctcga
      481 tggtgttgaa gccggcccgg agcgcggcgt ctataccgtc ccagccgatg gcgtgcgcgg
      541 cgatcttccg gccgagccgg tgggcctcgt ccacgaaggc cttgaactcc tcatcggtga
      601 agttgaccca gctgtggagc cgcccgtcct gacccaggta gtaccgccgg tcggcgtaga
      661 ccttgatcca gtcggcgccg tacttcacct gttcccggac cgccttcctg atgttgtcca
      721 ccccgtcgac gatctgcact ccttccggca cccggagctc ccaggagtag ccggaaagcg
      781 ggtacatgcc ggtggcgctg aacgcgcggg tggccacgaa cagtcgcggg ccgggtatga
      841 tgccgcggtt gatggcgttg cgcacgtcga cgtcggcgta catggcgccc tcggtctcga
      901 ggtcgcgcat ggtggtgaaa ccgttcagga gcgcggtgcg caccccgacg gtcgcccgga
      961 tggttcggta ggggatggac tccttcagga gctgatcgtc gtaatccgtc gcggtgatgt
     1021 cgccctggag caggatgtgg gtatggttgt cgatcaggcc gggcagtacc gtcattccac
     1081 tcagatcaat ccgccgcgca tctccggccg ccgcctccat ctggggccag ggcccgacgc
     1141 tggtgacccg gttaccctcc accaggatgc cctgatcgga cgcgggacgg tcggcgaggc
     1201 catcgacgag ctggcccgcg tggatcagga tccgggttgg cgccccggcc gcctgacccg
     1261 cggcgggtcc cgccgggaaa cccagcaggg cgacggtgag agccgcgtgg cggatgtggc
     1321 gaagggcgct ggagggcgac ataatggcgg acctcgggga gagtgcgtga acgccaggaa
     1381 tatgtggagc gggcggtgag agatattccc gttcccggcc ggaaaggcaa ggccgtccgg
     1441 gccgcaacgg ctgccgtact gctcgtggcg tctataccgt cgccgacgga tgaggggccg
     1501 cggtatcatc cgctgcagct cgactgcgcc ggctaccgcc agcaggccca gtccagcatc
     1561 ctgctggtcg cgggtcggca gcgatcgcgt gaacggacgg gccgagatgg ggtgctggtg
     1621 ctgcgagccg cgcgggccga cagctccatc cggctggagg catggttcga cacgctcagc
     1681 ctgtggcgcg agggatcagg tgaacggctc gagccggata cggacggttt gatcggcggg
     1741 cgttaccggg gcctgctcac gccgttcggc tccttct
//
LOCUS       DATIFF010001046         1281 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1978660, whole genome shotgun sequence.
ACCESSION   DATIFF010001046 DATIFF010000000
VERSION     DATIFF010001046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1281
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1978660"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(282..1010)
                     /locus_tag="VLD58_15225"
     CDS             complement(282..1010)
                     /locus_tag="VLD58_15225"
                     /inference="COORDINATES: protein motif:HMM:NF015863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HSB55711.1"
                     /translation="MTRTMLWIHKWIGITLGVLVFIWLASGIIMELPFTPPVPDAAAG
                     RFEPATAVISPAQAVALVATREQDTAAVRRVDVVLVAGQAYYDVQVRGGRDYLIDVRT
                     GERLQMSPAVAEATARRGLPDGVPLVSVRQVSDHSLYEYPGGPLPAYRVEFGDPRHTI
                     AYVSARDGSVRHTTRWIRLRYFISDMHTFQQLETLTGSKLVSHGSITGTSAIAILLVL
                     TGYYLVLPRRWQRKFARRTGMRRG"
     gene            complement(1007..>1281)
                     /locus_tag="VLD58_15230"
     CDS             complement(1007..>1281)
                     /locus_tag="VLD58_15230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55712.1"
                     /translation="FGTETPLSVTEMVQHILIRMNRPELTPVILNQASHEIQRQYLDC
                     TKARSMMGWRPRFTLEAALTETIAWYTQWLAARAGARAGPVGEVSA"
BASE COUNT          203 a          446 c          437 g          195 t
ORIGIN      
        1 gcagggatca cgaccgtgac cgcccgctcg agcgggggtg aatcctccag gatctcttcg
       61 atcacgcgct ctggcctcgg cggttgaacg ggtccggcgg gcgccaacgg gcgccccggg
      121 gggcctctcg cggggcaagc cccgttccac ggcaccgcgt cgggtcaggc cgacgcaact
      181 ctctcccggc ccggaatcgg tccgaaaccc gggccccgac acagtttatg gtgttgccac
      241 cgcattggcg accgtgcccc ggccgcgcgg ggccgggtgt gctagccccg ccgcatgccc
      301 gtgcgccggg cgaattttcg ctgccaccgc cggggcagga ccaggtagta cccggtcagc
      361 accaggagga tcgcgatcgc gctggtgccc gtgatggacc cgtggctcac cagtttgctg
      421 ccggtgaggg tctcgagctg ctgaaacgtg tgcatatccg agatgaagta gcgcaaccgg
      481 atccatcgcg tcgtgtggcg caccgagcca tcccgagcag acacataggc gatcgtgtgg
      541 cggggatcgc cgaactccac ccggtaggcc ggcagggggc ccccgggata ctcgtacagc
      601 gagtggtcgg atacctgccg cacgctcacc agcggaacgc cgtcggggag gccccggcgg
      661 gcggtcgcct cggccacggc cgggctcatc tgcagccgct caccggtgcg gacgtcgatc
      721 agatagtcac gcccaccccg tacctgcaca tcgtagtagg cctggccggc cacgaggacc
      781 acgtccacgc ggcgcacggc cgccgtgtcc tgctcccggg tggcgaccag ggccacggcc
      841 tgggccggcg agatgaccgc cgtggcgggc tcaaaccggc ccgcggctgc gtccggcacc
      901 ggaggggtaa aaggaagctc catgatgatc ccgctcgcca gccagatgaa cacgaggacg
      961 ccgagcgtga tgccgatcca cttgtgtatc cacagcattg tgcgagtcat gccgatacct
     1021 ctcccaccgg gcccgccctc gccccggcgc gggcggcgag ccactgtgtg taccaggcga
     1081 ttgtttcagt aagggcggcc tcgagcgtga accgcggacg ccaccccatc atggaccgcg
     1141 ccttggtgca gtccaagtac tgccgctgaa tctcgtggct ggcctgattc aggattaccg
     1201 gcgtcagctc gggccggttc atccggatca ggatgtgctg gaccatctcg gtgaccgaca
     1261 gcggagtctc ggtcccgaag t
//
LOCUS       DATIFF010001047         1624 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1056657, whole genome shotgun sequence.
ACCESSION   DATIFF010001047 DATIFF010000000
VERSION     DATIFF010001047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1056657"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            138..689
                     /locus_tag="VLD58_15235"
     CDS             138..689
                     /locus_tag="VLD58_15235"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HSB55713.1"
                     /translation="MTPLDEALAGNREVLAQAADLLGRLSDADYVASGGLAGRSPIGA
                     HLRHALDHYRSFFAGLKDGRVDYEARHRDSALEHDRLLAAEEVARLRRALEQLTGGEG
                     NREILVNLCSMADPGAGADWSRSTLKRELQFLVSHTVHHFALIRVRLLDLGLEPEEEF
                     GMAPSTILARRRGAAGAPDLATR"
     gene            686..>1624
                     /locus_tag="VLD58_15240"
     CDS             686..>1624
                     /locus_tag="VLD58_15240"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSB55714.1"
                     /translation="MIPRVRLRWLAWAYLGLLLASHIVRRVSPKPHPADPDELVQLVR
                     AERGERQTDATVHLAYRQFLPESAGSAPTILLVHGSPGDNGEVTALSRLLGQRYRTLA
                     PDLPGFGGSTWDVPDYSNRAHARYLLQLLDSLHLTRVHLVGFSMGGGVVLQLADLAPE
                     RVRSITMLSAIGAQEYELLGDYHLNHAIHGLQLAGLWLLREGTPHFGWLDDAMLSVAY
                     ARNFYDTDQRPLRKILERYAGPMLILQGEHDVLVNPALAREHARIVPQAELYMDQGDH
                     FTAFTHPERIADAVAPFVARVEAGTAVTRATADPARV"
BASE COUNT          236 a          593 c          536 g          259 t
ORIGIN      
        1 ggggagtttg tcggataaca tgcgacagcg ccgcgcgaga tgggcggcag aaggatgtaa
       61 tttacccccg gctggcgcgg tgaacggcga aaccgttcat ttcattcgtc caggattcct
      121 catcttccgg agtttgcatg accccgctcg acgaagccct cgcgggcaat cgtgaggtgc
      181 tggcgcaggc cgccgatctg ctgggacgac tgtcggatgc cgactacgtc gcgagtggcg
      241 ggctggcagg ccgatctccc atcggggccc acctgcggca cgcgctcgat cactaccggt
      301 cgttcttcgc cgggctcaag gacgggcggg tggactacga ggcgcgtcac cgcgattcgg
      361 cgctggagca cgaccggctc ctcgcggccg aggaggttgc ccggctccgg cgggcgctgg
      421 agcaactgac cggcggcgag ggcaaccgcg aaatcctggt gaacctctgc agcatggctg
      481 acccaggcgc cggcgccgat tggagccgtt cgacgctcaa gcgcgagctc cagttcctgg
      541 tgagccacac ggtccatcac tttgccctga tccgggtgcg cctgctggat ctcggcctcg
      601 agccggaaga ggagttcggc atggcgccct ccaccatcct ggcccggcgc cgcggcgcgg
      661 cgggagcgcc cgacctggcc acccgttgat cccacgcgtt cggctgcgct ggctcgcctg
      721 ggcctatctc gggcttctgc tggcgtcgca catcgtccgg cgggtctccc ccaagccaca
      781 cccggccgac cccgacgagc tggtgcagct ggttcgggcc gagcgcggcg agcgccagac
      841 cgatgccact gtgcacctcg cctaccgcca gtttctcccc gagagcgctg ggtcggcgcc
      901 cacgatcctg ctggtccatg gaagccccgg cgacaacggc gaagtcaccg ccctctcccg
      961 cctcctcggc cagcgctacc gcaccctcgc tcccgatctc cccggcttcg gcgggtcgac
     1021 ctgggacgtc ccggactatt ccaaccgggc ccatgcccgt tacctcctcc agctgctcga
     1081 cagcctgcac ctcacccggg tccacctggt gggcttcagc atgggtggcg gggtggtgct
     1141 gcagctcgca gacctggcgc cggagcgggt ccgctccatc acgatgctct cggccatcgg
     1201 cgctcaggag tacgagctgc tcggcgacta ccacctgaac cacgccattc acgggctgca
     1261 gctcgccggg ctctggctcc tgcgcgaagg cacgccccac ttcggctggc tggacgatgc
     1321 gatgctctcg gtggcctacg cccgcaactt ctacgacacc gaccagcgtc cgctccggaa
     1381 gatcctggag cgctacgccg gcccgatgct gatcctccag ggcgaacacg acgtgctggt
     1441 aaaccccgcg ctggcgcggg agcatgcccg gatcgtcccc caggccgagc tgtacatgga
     1501 ccagggcgac cacttcaccg ccttcaccca tccggagcga atcgccgatg cggtggcgcc
     1561 gttcgtggcg cgggtggagg caggcaccgc ggtgacccgc gcaacggcgg accccgcgcg
     1621 ggtg
//
LOCUS       DATIFF010001048         1148 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_439159, whole genome shotgun sequence.
ACCESSION   DATIFF010001048 DATIFF010000000
VERSION     DATIFF010001048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_439159"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            296..>1148
                     /locus_tag="VLD58_15245"
     CDS             296..>1148
                     /locus_tag="VLD58_15245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55715.1"
                     /translation="MLLTLALSAGLGLGHATPDPSHRHDVSVSLTVDSARHEIQIKAG
                     PFFLPNMGAMDAHAMMDMGASHDTPVYHFTWPVAGWLRGFRTNVVDANGGQLPKHVMH
                     HMIGVNYARRQLLYPAAERLFGAGQETADASIPSSIGVPMKPGMDIGFYIAWHNDTGQ
                     DMDGVYLAMTLQYLPENMNPQPISVLPLYMDVNLTVGGTNTFDVPPGRSEKAFEFTMP
                     IGGRLLGYGGHLHDYGVGVRLEDVATGKVIARVEAVRSKEGKVSGVSRSLPGVRGAGL
                     KLRAGRTY"
BASE COUNT          187 a          415 c          377 g          169 t
ORIGIN      
        1 gccccctccg acgttgcccg ctggcccacc atccaaccga acgattcgct ctacgcgcgc
       61 gacctgcact tcctggcgcg gcgcggcgcc gccatgcgca agatggcgac ccggccggag
      121 gctcgggact ccgcggccgc agcccaccag cacgagcacc atcacgagtg acaaccgcct
      181 ccgctcggcg ccgagagaat cggtcgcaat tcctccggcg cgcggcggtc gggcagtggc
      241 ctgcgccact ccctgccgtc tagattaccg cggcttccgc acccctggag atagcatgct
      301 gctcacgctt gcgctgtccg ccggcctcgg gctcggccac gcgaccccgg acccctcgca
      361 tcgccacgac gtcagcgtct cgctcaccgt ggattccgcc cgccacgaga tccagatcaa
      421 ggccggaccg ttcttcctgc cgaacatggg tgcgatggac gctcacgcca tgatggacat
      481 gggcgcgtcg cacgacacgc ccgtgtacca cttcacctgg ccggtagccg gctggctccg
      541 cggcttcagg accaacgtgg tggatgccaa cggcggccag ctgcccaagc acgtgatgca
      601 ccacatgatc ggcgtgaact acgcccgccg gcagctcctc tacccggcgg cggagcggct
      661 cttcggcgcc ggccaggaga ccgccgacgc ctccatcccg tccagcatcg gggtcccgat
      721 gaagcccgga atggacatcg ggttctacat cgcctggcac aacgacaccg ggcaggacat
      781 ggacggtgtg tatctggcga tgaccctcca gtacctgccg gagaacatga atccgcagcc
      841 gatcagcgtc ctgccgctct atatggacgt gaacctcacg gtcggcggca ccaacacttt
      901 cgacgtgccg ccgggccgct cggagaaagc cttcgagttc accatgccta tcggtgggcg
      961 gttgctgggg tacggcgggc acctgcacga ctacggggtc ggggtgcggc tggaggatgt
     1021 cgccaccggg aaggtgatcg cccgggtgga ggcggtgcgg agcaaggagg ggaaggtgag
     1081 cggagtgagc cgcagcctgc ccggcgtgcg cggtgccggg ctcaagctcc gggccggccg
     1141 gacctacc
//
LOCUS       DATIFF010001049         2825 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_594295, whole genome shotgun sequence.
ACCESSION   DATIFF010001049 DATIFF010000000
VERSION     DATIFF010001049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2825
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_594295"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..259
                     /locus_tag="VLD58_15250"
     CDS             <1..259
                     /locus_tag="VLD58_15250"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB55716.1"
                     /translation="ALNFRPGPAFEATRAYVAGLYVAPDYRHLGLGRHARRLVQDLGK
                     WLHVQIFDFETEGEAKHALALTRHAGVLRAWMDETPWQASA"
     gene            256..1416
                     /locus_tag="VLD58_15255"
     CDS             256..1416
                     /locus_tag="VLD58_15255"
                     /inference="COORDINATES: protein motif:HMM:NF028222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HSB55717.1"
                     /translation="MTNATMEPMGGRMTASPRPMMRAVAVMPGKPGSVHLATMPRPAV
                     ADVPGGRGVLVKVLRVGVDGTDKEINAAEYGAAPEGFDFLVIGHESFGRVEAVGPKVT
                     ELAVGDYVVATVRRPGHSIYDVIGTNDMTTDSVYYERGINLRHGYLAEYYVDDAEFMV
                     RIPGGLKEVGVLLEPTTVVEKGIAQAYEIQRRLRVWKPRKAAVMGAGTIGLLAAMALR
                     IRGLDVTVFGLERRPYLNSDLIEALGARYESTRDLTVMEGAGKHGPFDLIFEATGYSP
                     IVFESMQALAKNGVLVLSSVTGGDRMVSVPADRINLDFVLGNKVMVGTVNANREYFET
                     GVKDLATCEAQYPGWLARLLTHPVDGLDNYGQLFEHLTMGKGVIKAYCKVSD"
     gene            1662..>2825
                     /locus_tag="VLD58_15260"
     CDS             1662..>2825
                     /locus_tag="VLD58_15260"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB55718.1"
                     /translation="MPLSFPGFEVEAELHHGRKRVVFRARRIADGAEVIVKTLVSEFP
                     PPADTAGLRREYQILQGLAIPGVARALELVSHRDRLALVLENAGDTTLKLAAAAGPLS
                     VTTFLSYARQLAAALGAVHRAGLIHKDVTSTNIIVDRAAGRVTLSDFGIASRARSEQQ
                     VPGLPHLIEGTLAYMSPEQTGRMNRDLDHRSDLYSLGVVFYEMLTGRLPFESPDPLEL
                     IHWHVAQAPVPPSVLLPSVPLLLSDLVVRLLAKNAEDRYQSAEGVEADLFRAEQSWHA
                     AGTIEPFSLAQDDLRDRFTIPQRLYGRETQVARLLEAFERTTQGRTELVLVSGYSGIG
                     KTALIQETYRALARHRGEYTAGKFDQLARDIPYSALTQALQGFVRILLSETDET"
BASE COUNT          459 a          992 c          920 g          454 t
ORIGIN      
        1 cgccctcaac ttccggcccg gccccgcctt cgaggcgacc cgcgcctacg tggcgggcct
       61 ctacgtcgcc cccgactatc gccacctcgg ccttgggcgc catgcccgcc ggctggtgca
      121 ggacctcggg aagtggctcc acgtccagat cttcgatttc gagaccgagg gcgaggccaa
      181 gcatgcgctc gcgctcaccc gtcatgccgg cgtgctccgc gcctggatgg acgaaacccc
      241 ctggcaggca tccgcatgac caacgcgacg atggaaccga tgggcggccg aatgacggcg
      301 tcgccccgac cgatgatgcg ggccgtggcc gtgatgccgg ggaagcccgg ctcggtccac
      361 ctcgccacca tgccgcgccc cgcggttgcc gatgttccgg gcggccgggg cgtgctggtg
      421 aaggtgctcc gggtgggtgt ggacggcacc gacaaggaga tcaacgcggc ggagtatggc
      481 gccgcgccgg agggattcga cttcctggtg atcggccacg agagcttcgg ccgggtcgaa
      541 gccgtcggcc ccaaggtgac cgagctggcg gtgggtgact acgtcgtggc cacggtgcgc
      601 cgtcccgggc acagcatcta cgatgtcatc ggcaccaatg acatgacgac cgacagcgtc
      661 tactacgagc ggggtatcaa ccttcgccac gggtacctgg cggagtacta cgtcgacgat
      721 gccgagttca tggtccggat tccgggtggg ctcaaggagg tcggtgtgct tctcgagccg
      781 accaccgtgg tggagaaggg gatcgcccag gcctacgaga ttcagcgccg gctccgggtc
      841 tggaagcccc ggaaggcggc ggtgatgggg gcgggcacca tcgggctcct ggccgccatg
      901 gcgctccgga tccgcgggct cgatgtcacc gtcttcggcc tcgagcgccg gccctatctc
      961 aactccgacc tgatcgaggc cctgggcgcc cgctacgagt ccacccgtga cctcacggtc
     1021 atggaaggcg ccggcaaaca tggccccttc gacctgatct tcgaagccac cggctattca
     1081 ccgatcgtct tcgagagcat gcaggcgctg gcgaagaacg gcgtcctggt gctgtcgagt
     1141 gtcaccggcg gcgaccgcat ggtctcggtg ccggccgacc ggatcaatct cgacttcgtg
     1201 ctgggcaaca aggtcatggt ggggacggtg aacgccaacc gcgaatactt cgagaccggg
     1261 gtcaaggacc tggccacctg cgaggcgcag taccccggct ggctcgccag gctgctgacg
     1321 cacccggtgg acggactcga caactacggc cagctgttcg aacatctcac catgggcaag
     1381 ggagtcatca aggcgtattg caaggtgtcg gattgagcgg cgaccgccgt caccgtaact
     1441 gcataccata gatgagcata gatgggaccg gagagcggcg gcaactgacg gccagcctct
     1501 gcggagccgg ccgcgactcc agagcgtgat cagttcccct cggtggcatc tgtgtatgcc
     1561 gttgaccatc tctccccggc aagaaacgcc gataaagaga gttggacgaa acccggttgg
     1621 cggagtatga tcctcgactc tgaggacaat ctggaacaac ggtgcccctg agtttccccg
     1681 ggttcgaggt ggaggccgag ctgcaccacg ggcgcaagcg cgtggtcttt cgcgcgcgcc
     1741 gtatcgccga tggcgccgaa gtcatcgtca agacgctggt ctccgagttt ccgccgcctg
     1801 ccgacaccgc cggcctccgc cgtgagtacc agattctcca ggggctcgcc attcccggcg
     1861 tggcccgggc cctcgagctc gtcagccacc gcgaccggct ggcgctggtg ctcgagaacg
     1921 ccggcgacac gaccctcaag ctcgccgccg cggcgggacc gctctccgtc acgacgttcc
     1981 tctcctacgc ccgtcagctc gctgcggccc tcggcgcggt ccaccgggcc ggcctgatcc
     2041 acaaggacgt caccagcacc aacatcatcg tcgaccgcgc cgccggccgg gtgacgctga
     2101 gcgacttcgg catcgcctcg cgggcccgct ccgagcagca ggtccccggg cttccccacc
     2161 tgatcgaagg caccctcgcg tacatgtcgc cggaacagac cggccgcatg aaccgcgatc
     2221 tcgaccatcg gagcgatctc tactcgctcg gggtggtctt ttacgagatg ctgaccggac
     2281 ggctcccgtt cgagtcgccc gacccgctcg agctgatcca ctggcacgtg gcccaggcgc
     2341 cggtgccgcc ctcggtgctg ttaccctccg tgccgctcct gctttccgac ctggtggtcc
     2401 ggctcctcgc caagaacgcc gaagaccgat accagagcgc cgagggggtc gaggccgatc
     2461 tcttccgggc cgagcagtcc tggcatgccg ccggcaccat cgagccgttc tccctcgcgc
     2521 aggatgacct gcgcgaccgc ttcaccatcc cgcagcgcct ctacgggcgc gagacccagg
     2581 tggcccggct gctcgaggcc ttcgagcgca ccacccaggg acgcaccgaa ctggtgctcg
     2641 tctccggcta ttccggcatc ggcaagactg cgctgatcca ggagacgtat cgcgcgctgg
     2701 cgcgccatcg cggtgagtac accgccggga aattcgacca gctggcgcgc gacatcccgt
     2761 attccgcgct gacccaggcg ctccagggtt tcgtccgcat cctgctctcc gagaccgacg
     2821 agacg
//
LOCUS       DATIFF010001050         1864 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_439842, whole genome shotgun sequence.
ACCESSION   DATIFF010001050 DATIFF010000000
VERSION     DATIFF010001050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1864
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_439842"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VLD58_15265"
     CDS             <1..192
                     /locus_tag="VLD58_15265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HSB55719.1"
                     /translation="RFSRSYLRHLFMAEEMLGLRLVSIHNIRFLVRLGELARTHILGG
                     TFDRWRREWLERYHRRGET"
     gene            189..515
                     /gene="yajC"
                     /locus_tag="VLD58_15270"
     CDS             189..515
                     /gene="yajC"
                     /locus_tag="VLD58_15270"
                     /inference="COORDINATES: protein motif:HMM:TIGR00739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HSB55720.1"
                     /translation="MTLSLLALMAPSDNPQAGLTMLLLQIGGIALVFFFLILRPQQQA
                     RKKHEELLKNLKKGDEIVTAGGIMGKVKDIKEDRVTIESGTSTLVVERARIVRVGDQA
                     APGASV"
     gene            512..1048
                     /gene="def"
                     /locus_tag="VLD58_15275"
     CDS             512..1048
                     /gene="def"
                     /locus_tag="VLD58_15275"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: protein motif:HMM:NF001159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HSB55721.1"
                     /translation="MTILDLHLLGSPVLREASAPVKAVDEETRRFIADLFETMYAAKG
                     VGLAANQVGVARRIAVIDADGHRLALVNPRIVAAQGREAAEEGCLSIPDIYGEVSRPD
                     RVVLEALDQDGKPYRVELEELAARAVQHEIDHLDGILFIDHLSPLKRKRILAKWKKEH
                     ADDDGFIKPVKPEPASSS"
     gene            1048..>1864
                     /gene="fmt"
                     /locus_tag="VLD58_15280"
     CDS             1048..>1864
                     /gene="fmt"
                     /locus_tag="VLD58_15280"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HSB55722.1"
                     /translation="MRIAFFGTPEFAVPSLRALLEEGFDVVAVITQPDRPHGRSRSTV
                     VPPPVKVVALEEEIPVLQPEKPVGPFLDEFRALGADIAAVVAYGHILRPELLAIPRLG
                     MINVHASILPSLRGAAPIQWAILNGEETTGVSIMQLEAGLDSGPVLHTIQTEVARDET
                     GGELTERLAELGAAALIETLTLIEGGEAQPVPQDHSLATFAPKVNRQTARLDWSKDAA
                     GLARVIRAFDPEPGAWCLLDGAEVKLFGARAANGSGEPGLVLEIGRTLLIAAGV"
BASE COUNT          308 a          649 c          619 g          288 t
ORIGIN      
        1 cggttctccc gcagctatct gaggcatctg ttcatggccg aggagatgct cgggctccgg
       61 ctggtctcga tccacaacat ccgcttcctg gtgcggctgg gcgagctggc ccggacccat
      121 atcctgggag gcacattcga ccgctggcgc cgggaatggc tcgagcggta tcaccgtcga
      181 ggagaaacgt gaccctgtcc ctgctggccc tgatggcgcc ctccgacaat ccccaggccg
      241 ggctgaccat gttgctgctt cagatcggcg gcatcgccct ggtgttcttc ttcctgatcc
      301 tgcggcccca gcagcaggcc cggaagaagc atgaggagct gctcaagaac ctgaagaagg
      361 gcgacgagat cgtcaccgcg ggcgggatca tgggcaaggt gaaggacatc aaggaagacc
      421 gggtcaccat cgaatcgggg accagcaccc tggtggtcga gcgcgcccgc atcgtgcggg
      481 tcggcgatca ggccgcaccc ggagccagcg tgtgacgatc ctcgatctcc acctgctcgg
      541 ctccccggtg ctccgggaag ccagcgcccc ggtcaaggcg gtcgacgagg agacccgtcg
      601 gttcatcgcc gatctcttcg agaccatgta cgccgccaag ggcgtcggac tggccgccaa
      661 ccaggtgggg gtcgcccgtc ggatcgcggt catcgacgcc gatggccaca ggctcgcgct
      721 ggtgaatccc aggatcgtcg cggcccaggg ccgggaagcg gccgaggaag ggtgcctctc
      781 gattcccgac atctacggtg aggtctcccg gccggaccgg gtggtgctgg aagcgctcga
      841 ccaggacggg aagccctacc gggtggagct cgaagagctg gccgcccggg cggtccagca
      901 cgagatcgac catctcgatg gcatcctctt catcgaccac ctgagcccgc tcaagcgcaa
      961 gcggatcctg gccaagtgga agaaggagca tgccgacgac gacggcttca tcaagcccgt
     1021 gaagccggaa ccagccagtt cctcctgatg cgcatcgcct tcttcggcac ccccgagttc
     1081 gcggtcccgt cgctgcgggc cctgctcgag gaaggcttcg acgtggtggc ggtcatcacc
     1141 cagcccgacc ggccccacgg ccgttcccgc agcaccgtcg tgcctccccc ggtcaaggtc
     1201 gtcgcactcg aggaagagat cccggtcctc cagccggaga agccggtcgg tcccttcctc
     1261 gatgaattcc gcgccctcgg cgccgatatc gccgcggtgg tggcctacgg tcacattctc
     1321 cgcccggagc tgctcgccat tccccggctc ggcatgatca acgtgcatgc gtcgatcctg
     1381 ccgtcgctcc ggggtgcggc accgattcag tgggccatcc tcaacggcga agagaccacc
     1441 ggtgtcagca tcatgcagct cgaggctggg ctcgactcgg gcccggtgct tcacaccatc
     1501 cagaccgaag tcgcgcggga cgaaaccggc ggcgaactca ccgaacggct ggccgaactc
     1561 ggcgccgcgg cgctgatcga gaccctgacg ctgatcgagg ggggcgaagc ccagccggtg
     1621 ccgcaggacc atagcctggc caccttcgct cccaaggtga accgccagac cgcgcggctc
     1681 gactggagca aggacgccgc cgggttggcc cgagtcatcc gcgccttcga tcccgaaccc
     1741 ggcgcctggt gcctgctcga cggggccgag gtcaagctgt tcggcgcccg cgcggccaac
     1801 gggagcggcg agccgggcct ggtgctcgag atcggccgca cgctgctgat tgccgccggc
     1861 gtcg
//
LOCUS       DATIFF010001051         3459 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1518656, whole genome shotgun sequence.
ACCESSION   DATIFF010001051 DATIFF010000000
VERSION     DATIFF010001051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3459
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1518656"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..890
                     /locus_tag="VLD58_15285"
     CDS             <1..890
                     /locus_tag="VLD58_15285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55723.1"
                     /translation="DQVERLADEGLELDPENEEAAVLLALAKNRDRDGPLDPTAWQSL
                     SARFPLNSTARTAAGWTRLRAGQIHDARTDFEQALALDPDIPWAREGLAMALKAQSPV
                     YGLLLRYFTWSSELSERTRNLMVIGAVLGFNALRGLARQYPALEPVVWPVLIAYGIWL
                     ALTWLSDPLLDLTLLARAETRRLVSPDNRRAAILIGSALGLALLWSLAALLTPFADGL
                     GTALSLVFVTLPIKGAYSAPPSSKRDRLLVIAAVALALGLAASLAPADYRGISLGVSV
                     LLSALSTWYSRFGKATPQQ"
     gene            966..1667
                     /locus_tag="VLD58_15290"
     CDS             966..1667
                     /locus_tag="VLD58_15290"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HSB55724.1"
                     /translation="MANFADAVIYYVVFLFSTTLHEAAHAWAAARGGDLTAYHGGQVS
                     LNPVPHIRREPIGMVLLPLLTVFTTGWPFGYASAPYNIDWARRYPTRAAWMALAGPAA
                     NLLLVIIAGLLIRGGAAAGIVIAPQTVRFGEIAETVGSGLWPGAFHFIGVLFSLNLLL
                     AAFNLLPFPPLDGSGALPLLLSPSATRRYQDFIWSTPALGFVGIFIAWQLFDSLFHPI
                     FFAALGLLYPGVAYR"
     gene            1690..2334
                     /locus_tag="VLD58_15295"
     CDS             1690..2334
                     /locus_tag="VLD58_15295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55725.1"
                     /translation="MTDVEQLAAALRPDFAALTPAADRAWSRATAVQLLDCVLSLRRA
                     DGRGVSDRLDAFERRFPAVEQLPQLRSLLGSYKSPALFAKDVLDLPEPSSVTLLKALL
                     DYLIRTVLDGPGAEVERLRLWAQRARPQDYLALHIPGMGLAGFQHLRMLYGANTTRPD
                     ALVSRYVATAIGRPVADVQSLRLLEEAAPLARIQLRDIDAAAWEAGLQRRRTAS"
     gene            2425..2658
                     /locus_tag="VLD58_15300"
     CDS             2425..2658
                     /locus_tag="VLD58_15300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55726.1"
                     /translation="MDDKTRRELKNQLQTLGANNAGFRGLMGLPPTPIVGGVPPVPIP
                     TDLALNPYLHGLRQHADDFDRLLKLLETVVDQI"
     gene            2810..3412
                     /locus_tag="VLD58_15305"
     CDS             2810..3412
                     /locus_tag="VLD58_15305"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSB55727.1"
                     /translation="MGTRSRFLSLVLAAVSLLGACAGAGTSAGDSAALVERGRYLTVV
                     GACHDCHTPKVMTPAGPTPDTTRMLSGHPADMAVGEAPGQLPATWFASTNGDLTAWAG
                     PWGVSFTANLTPSKYGLAGWTPEMFIQTIRQGKHAGVGRALLPPMPWANYAQMKDEDL
                     RAIFAYLQSLPPIDNRVPAPRPPATQPSAARAGSPGSRAG"
BASE COUNT          473 a         1295 c         1112 g          579 t
ORIGIN      
        1 gggaccaggt cgagcggctg gctgacgagg ggctggaact cgatcccgag aatgaagaag
       61 ccgcggtgct gctggcgctg gcgaagaacc gcgaccggga cggcccgctc gaccccacgg
      121 cctggcagtc gctctcggcc cgcttcccgc tcaactcgac cgcccgcacc gccgcgggat
      181 ggacccggct ccgggccggc cagattcacg atgcccgcac cgatttcgaa caggccctgg
      241 cgctcgaccc ggacatacca tgggcgcggg aaggtctggc catggcgctc aaggcgcaga
      301 gcccggtcta cgggctcctg ctccggtact tcacctggag cagcgagctc tccgaacgca
      361 cccgcaacct gatggtgatc ggggcggtgc tgggcttcaa tgcgctccgc ggcctggcgc
      421 gccaataccc cgcgctggag ccggtggtgt ggcccgtcct cattgcctat ggcatctggc
      481 tggcgctcac ctggctgtcg gaccctctgc tcgatctgac tttgctggcg cgggcggaaa
      541 cccgccggct ggtgagcccg gacaatcgcc gggcggcgat cctgatcggg agcgcactcg
      601 gcctcgcgtt actgtggagc ctggccgcgc tgctcacgcc gttcgccgat gggctcggca
      661 cggcgctctc cctggtcttt gtcaccctcc ccatcaaggg cgcttactcc gcgcccccca
      721 gcagcaagcg ggaccggttg ctggtgatcg cggccgtggc cctcgccctg ggcctggcgg
      781 cgagcctcgc gccagccgac taccggggga tcagcctcgg tgtctcggtc cttctctcgg
      841 ccctgtcgac ctggtacagc cgtttcggca aggccacacc gcagcaatag cttgccgccc
      901 gaccgggggt ggtgcagctt tcgccgtgca gcaggagcag tacgactctc ccctatcccc
      961 tcgccatggc caacttcgcc gacgccgtca tctactacgt cgtcttcctc ttttccacca
     1021 ccctgcacga ggccgcacat gcgtgggccg cggcgcgggg gggcgacctc acggcgtatc
     1081 acgggggcca ggtctcgctc aatccggtgc cgcacatccg gcgggagccg atcggcatgg
     1141 tgctgttgcc gctgctcacg gtgttcacca ccggctggcc tttcggatac gccagcgcgc
     1201 cctacaacat cgactgggcc cgccgctatc cgacccgcgc cgcctggatg gcgttggccg
     1261 gaccggcggc caacctgctg ctggtgatca ttgcgggtct cctcattcgc ggcggggcgg
     1321 ccgcgggcat cgtcatcgcg ccgcagacgg tgcgctttgg cgaaatcgcc gagacggtgg
     1381 ggagcgggct ctggcctggc gcgttccatt tcatcggagt gctcttctcc ctcaatctgc
     1441 tgctcgcggc cttcaatctg ttgccgttcc cgccgctcga cggcagcggg gccctgccgc
     1501 tgctgctgag tccctcggcc acccggcggt accaggactt catctggagc accccggccc
     1561 ttggcttcgt ggggatcttc atcgcctggc agctcttcga cagccttttc caccccatct
     1621 tcttcgccgc tctcggactg ctctaccccg gcgtggcata ccggtaagct cggctttccc
     1681 ttccgaccca tgaccgacgt cgagcaactc gccgccgcgc tccgccccga cttcgccgcc
     1741 ctgaccccgg cagcggatcg ggcctggtcc cgcgccaccg cggtgcagct gcttgactgc
     1801 gtcctatcgc tccgacgggc cgatgggcgc ggcgtctccg accggctgga cgcgttcgag
     1861 cgccgctttc cggcggtgga gcagctgccg cagctccgct ccctgctcgg gagctacaag
     1921 tcgccggcgc tcttcgcgaa ggacgtgctg gacctgccgg agccctcatc ggtcacgctg
     1981 ctcaaggcct tgctcgacta cctgatccgt acggtgctcg acgggccggg ggcggaggtg
     2041 gaacggctcc ggctctgggc gcagcgggcc cggccccagg actatctcgc cctgcacatc
     2101 cccggcatgg gcctcgccgg gttccagcat cttcgcatgc tgtacggcgc gaataccacc
     2161 cggcccgacg cgctggtgag ccggtacgtg gcaaccgcaa tcggacggcc ggtggccgat
     2221 gtgcagagcc tccggctact ggaggaagcg gcgccgctgg cgcgcatcca gctccgggac
     2281 atcgatgcgg cggcgtggga agcggggctc caacgacggc gcaccgcgtc ctgaggcgga
     2341 cgtgcctcct ggcgcttgcc cgccgttccc tgccccagca ccttatcgcg cagcaccaca
     2401 cctcacactg cagggagacc ggcgatggac gacaagactc gcagagagct caagaaccag
     2461 ctccagaccc tgggcgccaa caacgccggc tttcgcgggc tgatggggct tcctcccact
     2521 cccatcgtcg ggggagtccc acccgtcccc atcccgaccg acctcgcgct gaacccctac
     2581 ctccatggcc tgcggcagca tgcggacgac ttcgaccgcc tgctcaagct gctggagacg
     2641 gtggtcgacc agatctaggc ctcggccgcc atgccaaccc cctgtcagag ggccatttag
     2701 agagttgatc ggcgcttgat cggcaagtga gcgcccggca tagcttcagc ctccagttct
     2761 ccctgcgcct cacaactggc gccgaccgat cccgaactgg aggtgttccg tgggtacccg
     2821 ttcccgcttc ttgtccctcg tcctcgccgc ggtttccctg ctcggcgcct gcgccggcgc
     2881 cggaacatcg gccggcgact ccgccgcact ggtggagcgg ggccgctacc tcacggtggt
     2941 cggcgcctgc cacgactgcc acacgcccaa ggtgatgacc ccggccgggc cgactcccga
     3001 cacgacccgg atgctttctg gccacccggc ggacatggcg gtgggcgagg cgccgggcca
     3061 gctgccggcg acctggtttg cctcgaccaa cggcgacctc acggcgtggg ctggcccctg
     3121 gggcgtgagc ttcaccgcca acctgactcc ttcgaagtac ggactcgcag gctggacccc
     3181 ggagatgttc atccagacca tcaggcaggg gaagcacgcc ggtgtgggac gggcgctgct
     3241 ccccccgatg ccgtgggcca actatgctca gatgaaggac gaggacctgc gcgcgatctt
     3301 cgcctatctc cagtcgctgc ccccgatcga caaccgggtg ccggcgccgc gccctccggc
     3361 cactcagccc tccgcagcgc gggcggggtc gcccggctcg cgcgccggct gagcgagcct
     3421 aacaactcgt cggcagtcac aacctgctcg ccgcccgga
//
LOCUS       DATIFF010001052         4250 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_748822, whole genome shotgun sequence.
ACCESSION   DATIFF010001052 DATIFF010000000
VERSION     DATIFF010001052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4250
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_748822"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..546)
                     /locus_tag="VLD58_15310"
     CDS             complement(<1..546)
                     /locus_tag="VLD58_15310"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSB55728.1"
                     /translation="MILAHLADLHLGFRQFHRQTPAGLNQREADVAHAFRTAIDQIIG
                     AKPDIVVVAGDIFHSVRPTNPAILFAFRQFQRLREALPEAPVVVLAGNHDSPRSVETG
                     SILGLLDTLGITTVPDVMRRLTFPELPDLAILAVPDVAVRSGERVFRPEGDEKYQVLL
                     LHGAIPNLYAWEKHAPEYVGGL"
     gene            640..1125
                     /locus_tag="VLD58_15315"
     CDS             640..1125
                     /locus_tag="VLD58_15315"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HSB55729.1"
                     /translation="MKTTSPTRPDSDITAIVGGLRRVVRALEVYSHEVQRDFGLTAPQ
                     LWALKTLVREGPLTVNQLADHLHIHQSSASLLVNRLEGRRMVVRSKTGPDRRFVRIAP
                     TEEARAVLAEAPEPAQGRLLHGLRAMPPARLRNIRRAVEDLVGAMEAENVQARFFFEE
                     E"
     gene            1127..2671
                     /locus_tag="VLD58_15320"
     CDS             1127..2671
                     /locus_tag="VLD58_15320"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSB55730.1"
                     /translation="MSDQGGVIGPDLTKGIPVDQIQDGGMIEGHVGDEPVLLVRRGAV
                     FHAVGARCTHYSGPLAEGLLVGDTVHCPWHHACFDLRTGRATGGPALAPIACYRTERR
                     LDLIVVTGKVTEAPTRPRVNREHHPQAIVIVGAGAAGTAAALTLRDEGSQGKLTLIDS
                     DDGAPYDRPNLSKDYLAGTAPEEWLPIRSHEDLAARDIRLILGSPVLSLGIGDRTVRL
                     ADGRAYPYASLLLATGADAVRLPVPGADRPHVATLRSLADSRRLIRQAEGARRAVVLG
                     AGFLGLEVAASLRHRNLEVHVVAPDQRPLGKVLGEELGLRVQRLHEEHGVVFHLGHVA
                     REIGEKEVTLDDGSTIEAELVVIAAGARPRVDLAMKAGLVLARGIQVDRYLETSVKGV
                     YAAGDAARWPDPRTGKLIGVEHWAFAMRQGQAAARNMLGPRTPFAVVPFFWSQHYDMQ
                     ISYVGHAEAWDRLDIVAGLPPDQWEQHYLSGNTVIAVATVGRDQASLRAEAAMESAER
                     RQTAAV"
     gene            2671..3048
                     /locus_tag="VLD58_15325"
     CDS             2671..3048
                     /locus_tag="VLD58_15325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55731.1"
                     /translation="MDVISTTLPLSGFGTPRTEAKLEIGSLSAGERFRRAVIAPVAGL
                     FVSIAVLPIPIVHFAVPPVAILTGIVLGIRRIGQRRIITRAEGVCPFCGTSQTLGLNG
                     TSYRMPRELKCRSCLKPFTISAD"
     gene            3055..>4250
                     /locus_tag="VLD58_15330"
     CDS             3055..>4250
                     /locus_tag="VLD58_15330"
                     /inference="COORDINATES: protein motif:HMM:NF012861.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HSB55732.1"
                     /translation="MVPHHSATLITPDAAPRVGRRNLFVSAAAILIAIGAGLLAEALT
                     ALIGLITSLSFHGRVALHASPADNHLGAWVILVPVLGAVVVGLMARYGSPAIRGHGIP
                     EVMERILRHESRIAPGITILKPVSTAISIGTGGPFGAEGPIIATGGALGSMVGQILRV
                     TAEERKTLLAAGAAAGMAATFGAPVAATLLAFELLLFEYRPSSLAPVALATAAATVVR
                     YLFHGSAPVFVIPDIIASPGGEAMTAYVLLGAVVGYLSVSVTRGLYRVEDFFEKLPIH
                     WMWWPALGAVVVGLLGWFEPRVLGVGYENIGGLLDGTLVGRAALILITLKCIAWVVAL
                     GSGTAGGTMAPLFTIGGGAGSVLASMVIAAFPNIGVDVRIGALVGMAAMFTGASRALL
                     ASVVFA"
BASE COUNT          629 a         1455 c         1469 g          697 t
ORIGIN      
        1 cagacctccg acgtactcgg gtgcgtgctt ttcccaggca tagagattgg gaatggcgcc
       61 gtgcaggagc agcacctggt atttctcgtc tccctcgggg cggaagaccc gttcgccgct
      121 ccgtaccgcc acgtcaggaa ccgcgaggat ggccaggtca gggagttcgg ggaaggtgag
      181 ccgccgcatg acgtcaggga cggtggtgat tcccagcgtg tccagcaggc ccaggatgga
      241 gccggtttcc accgagcggg gcgaatcgtg gttcccggcg agcaccacga ccggagcctc
      301 cgggagcgcc tcacgcagcc gctggaactg gcgaaacgcg aagaggatgg ccgggttggt
      361 ggggcggacg gaatggaaga tgtcgcccgc caccacgaca atgtccggct tcgccccgat
      421 gatctgatcg atcgcggtgc ggaaggcgtg cgccacatcg gcttcccgct gattgaggcc
      481 cgcgggtgtc tgccggtgga attgtcggaa gccgagatgg agatcggcca ggtgggcgag
      541 aatcacgggg gagaattcta agggtgagac ggctgcgggg tgagagggcc ggaggcccgc
      601 tcccttgccc agatgtattg atatcaatac aattcttcca tgaagaccac ctcacctacc
      661 cgccccgata gcgatatcac agccattgtc ggcgggctcc gccgggtggt ccgggccctc
      721 gaggtctatt cccacgaagt gcagcgggac ttcggcctca ctgcccccca gctctgggcc
      781 ctcaagacgc tggttcgcga ggggcccctc accgtgaacc agctcgccga ccacctgcac
      841 attcaccaga gcagcgcttc gctgctggtg aatcgcctgg aggggcgccg gatggtggtc
      901 cgctcgaaga ccggcccgga ccggcggttc gtgcggatcg cgccgaccga ggaggcccgg
      961 gccgttctag cggaggcgcc cgagccggcc caggggcggc tgctccatgg cttgagggcg
     1021 atgcctccgg cccggcttcg gaacatccgc cgcgcggtgg aggacctggt cggggcgatg
     1081 gaggcggaga acgtgcaggc gcggttcttt ttcgaggagg agtgagatga gcgaccaggg
     1141 cggagtcatc ggacccgatc tgacgaaggg cattcccgtc gaccagatcc aggacggcgg
     1201 gatgatcgaa ggccatgtgg gtgacgagcc ggtgctgctc gtccgccgcg gggcggtgtt
     1261 ccatgccgtg ggcgcccgtt gcacccacta cagcggcccc ctcgcggaag gcctgctggt
     1321 gggcgacacg gtgcactgcc cctggcacca cgcctgcttc gatctccgta ccgggcgcgc
     1381 gaccggaggc ccggccctcg cgcccatcgc ctgctaccgg accgagcgcc ggctcgacct
     1441 catcgtcgtc accggcaagg tgaccgaggc acccacccgg cctcgggtga atcgcgagca
     1501 ccatccccag gccatcgtga tcgtcggggc cggcgccgcc ggcacggccg ccgctctcac
     1561 gctgcgcgac gagggatccc aggggaagct caccctgatc gacagcgacg atggggctcc
     1621 ctacgaccgt cccaacctct ccaaggacta tctcgcgggc accgcccccg aagagtggtt
     1681 gccgatccgt tcccatgagg acctcgcggc ccgggatatc cgcctgatcc tcggctcacc
     1741 ggtgttgagc ctgggcatcg gagaccgcac cgtgcggctg gccgacggcc gcgcctatcc
     1801 ctacgcctcg ctcctgctgg ccaccggggc ggatgccgtg cgcctccctg ttcccggtgc
     1861 cgaccgtccc catgtggcta cgctccggag cctggccgac agtcggcgac tcattcgcca
     1921 ggccgagggt gcccgccgcg cggtggtcct gggcgcggga ttcctggggc tcgaagtggc
     1981 agcctcgctc cgtcaccgga acctcgaggt ccatgtggtc gcccccgatc agcgcccgct
     2041 tggcaaggtg ctgggcgagg agctgggcct ccgggtccag cggctgcacg aggagcacgg
     2101 ggtggtcttt cacctcgggc acgtcgccag ggagatcggc gagaaggagg tgaccctcga
     2161 tgacggttcc acaatcgagg ccgagctcgt ggtcatcgcg gcgggcgccc gcccacgagt
     2221 ggatctcgcg atgaaggcgg gactggtcct cgccagggga atccaggtgg accgctatct
     2281 cgagaccagc gtgaaaggcg tgtatgcggc gggtgacgcg gcgcgctggc ccgatccccg
     2341 caccggcaag ctgatcggag tggagcactg ggccttcgcg atgcgccagg gccaggccgc
     2401 cgcccgcaac atgctcggcc cgaggactcc gttcgcggtg gtgccattct tctggagcca
     2461 gcactacgac atgcagatca gctatgtggg ccacgccgag gcgtgggacc ggctcgacat
     2521 cgtggccggt ctcccgccgg accagtggga gcagcactac ctcagcggca acaccgtaat
     2581 cgccgtcgcc accgtggggc gggatcaggc ctcgctccgc gccgaagcag ccatggaatc
     2641 ggcggagcgg cgccagacgg cggcggtctg atggacgtca tctccacgac cctgcccctc
     2701 tccgggtttg gcaccccccg gaccgaggcg aagctcgaga tcgggagcct gtcggccggc
     2761 gagcggtttc gccgggcggt catcgccccg gtggccggac tcttcgtcag catcgcggtg
     2821 cttccgatcc ccatcgttca ctttgcggtt ccgcccgtgg cgatcctcac gggcatcgtg
     2881 ctcgggatcc gtcgaatcgg gcagcggcgc atcatcaccc gcgccgaagg ggtctgcccc
     2941 ttctgcggca ccagccagac gctggggctc aacggcacca gctaccggat gccgcgcgag
     3001 ctcaagtgcc gctcctgtct caaacccttc acgatctccg ccgactgata tcctgtggtt
     3061 ccccaccact ccgcaacact gatcacgccc gatgcggccc ccagggtggg ccgccgcaat
     3121 ctcttcgttt cggccgcggc gatactcatc gcaatcggag ccgggctcct cgccgaagcg
     3181 ctgacggcgc tgatcggcct catcaccagc ctgtctttcc atgggcgcgt cgccctccac
     3241 gcgtcacccg ccgacaatca cctcggcgcg tgggtgatcc tggtgccggt actcggcgcc
     3301 gtcgtggtgg gactcatggc gcgctatggc tctcccgcga tccggggaca cggcatcccc
     3361 gaggtgatgg agcgaattct ccggcacgag agccggatcg cgccggggat caccatcctc
     3421 aagccggtat ccaccgcgat cagcatcggc accggtggtc cgttcggggc cgaaggaccg
     3481 atcatcgcga ccggcggggc gctcggctcg atggtgggcc agatactccg ggtgacggcg
     3541 gaggagcgaa agacgctgct cgcggccggc gccgcggcgg gcatggcggc gacctttggg
     3601 gcgccggtcg cggcgaccct gcttgccttc gaactgctcc tcttcgagta ccgccccagt
     3661 tcgctcgcgc cggtcgcact ggccaccgcc gccgccaccg tggtgcggta cctctttcac
     3721 ggctcggcgc cggtcttcgt cattccagac atcatcgcct cgccgggcgg cgaagcgatg
     3781 accgcttacg tgctgctggg cgccgtcgtc ggatacctct ccgtctcggt cacccgcggg
     3841 ctctaccggg tggaagactt cttcgagaag ctcccgatcc actggatgtg gtggccggcc
     3901 ctcggcgcgg tcgtcgtggg cctcctgggc tggttcgagc cacgggtgct gggggtgggt
     3961 tacgagaaca tcggcgggct tctcgacggt acgctggtag gcagggcagc gctgatcctg
     4021 atcaccctca agtgcatcgc ctgggtcgtc gcgctcggaa gcggaactgc cggaggcacc
     4081 atggccccgc tcttcaccat tggtggcggc gccggctcgg tgctcgcgag catggtcatc
     4141 gcggcgttcc ccaatatcgg agtggacgtg cggatcgggg ccctggtcgg gatggcggcg
     4201 atgttcaccg gcgcctcacg ggcgctgctg gcgtcggtag tcttcgcctt
//
LOCUS       DATIFF010001053         3892 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_748845, whole genome shotgun sequence.
ACCESSION   DATIFF010001053 DATIFF010000000
VERSION     DATIFF010001053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3892
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_748845"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..715)
                     /locus_tag="VLD58_15335"
     CDS             complement(<1..715)
                     /locus_tag="VLD58_15335"
                     /EC_number="2.7.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012443.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0046314 - phosphocreatine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP--guanido phosphotransferase"
                     /protein_id="HSB55733.1"
                     /translation="MIDLSLLTDGGVGWLDASGPASHLVLSTRIRLARNLAEHVFQGR
                     NSETEREGILTTVEAAARQSVLLRQATKFRLDRLDRLDRQLLHERHLVSKELAGLEVE
                     GRVRSGASLLVQDRIGVMLNEEDHLRIQGLHSGFDLDATYAEVDRLDAELGQRLAFAF
                     HPEFGYLTSCPTNVGTGLRASVLIHLPGLVLTKEISKVLQGLAQVGLTHRGLYGEGSE
                     VVGNFFQLSNQTTLGSSERE"
     gene            complement(712..1212)
                     /locus_tag="VLD58_15340"
     CDS             complement(712..1212)
                     /locus_tag="VLD58_15340"
                     /inference="COORDINATES: protein motif:HMM:NF014232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrB/UvrC motif-containing protein"
                     /protein_id="HSB55734.1"
                     /translation="MSCDQCHEREAVIHLTQIVNEQVTTLHLCERCAAEKGVESPGSA
                     VKTPLGSFLAAMGKNTEQATLPKTAESCPRCGASYQDFRESGRLGCSDCYVTFEAPLR
                     DLLRRLHGSTHHLGERYAEGERPTADHPAAKDRAAALREQLRLAVETENFELAAELRD
                     RLRVLE"
     gene            complement(1212..1913)
                     /locus_tag="VLD58_15345"
     CDS             complement(1212..1913)
                     /locus_tag="VLD58_15345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB55735.1"
                     /translation="MSAILEAEGLRKLYRGGDGAPIEVLSSVDLSVTRGEFVAIVGAS
                     GSGKSTLLHLLGALDAPTAGTVRLDGQAYADQTAEALAAIRNRKIGFVFQFHHLLREF
                     SALENVMMPLLIAGVDEGASRSRAEELLAAVGLAGRMTHRPSALSGGEQQRAAVARAL
                     ATDPLVVLADEPSGNLDHGNSERLHELFARLAREFETALVVVTHNRLLAGRADRVLSL
                     DGGHLVPLPGVESMP"
     gene            complement(1910..3214)
                     /locus_tag="VLD58_15350"
     CDS             complement(1910..3214)
                     /locus_tag="VLD58_15350"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB55736.1"
                     /translation="MARPQASERATLGSVLRWPSPLEWRIARRYLRSRRTSHVASLNT
                     VISTGGVAVGVMALIVVLGVMNGLRNDLRERILVANPHLRILTFGAGLRMDDWRKVLQ
                     VVRAQPGVVAASPEVISQAGITAGQDYGEGVNLVGFDPDTGARSVTSLPQSIKKGDLS
                     FRTTKPNVDGGILLGERLANRLSVYPGDVVTLVPVTQAKVNAAIGVAVPRFWRFEVTG
                     LFDTGMFQYDNQFVVVSRELAQKFTGLGDAVSGIAVRVENPDEAPRIGEELEKKLGYP
                     YRALDWQTQNASLFSALQLEKLAMGLIIFFIMVVAAFNIVGTLTMVVADKTREIGILR
                     AMGLTSPAVARIFLLQGAVIGGVGTAIGLAGGLVVAYVVDKSGWIRINPAVYFIDHLP
                     VHVEAEDVLVVVLASLAIAVLATLYPSRSAAGLTPVEAIRHE"
     gene            complement(3214..>3892)
                     /locus_tag="VLD58_15355"
     CDS             complement(3214..>3892)
                     /locus_tag="VLD58_15355"
                     /inference="COORDINATES: protein motif:HMM:NF012379.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HSB55737.1"
                     /translation="YQAYADYGDMMRLVEGLVSGVIEHCLGTRVLQRDGIALDFTPPF
                     ARVQFIEGIRERCGLDLRTAGEEEMRAVVRAAGMDAGEAAALSGGRLQDEVFKTVLEP
                     HLVQPTFLLDYPKALSPLAKQHRTDPALTERFELFVGGRELANAFSELNDPDDQRRRF
                     EDQAQQRAAGNEEAQPYDADYIRALEYGMPPAGGVGLGIDRLVMLLADQASIRDVILF
                     PAMRPEA"
BASE COUNT          620 a         1368 c         1306 g          598 t
ORIGIN      
        1 gctcacgctc ggagctgccg agcgtcgtct ggttcgacaa ctggaagaag ttgccgacca
       61 cctcgctgcc ctctccgtac aggccgcggt gggtcagtcc gacctgtgcc agcccctgca
      121 ggactttgct gatttccttg gtgaggacga gcccgggcag gtgaatcagc accgaggcgc
      181 gcaacccggt cccgacgttg gtcggacagc tggtaagata accgaactcg ggatgaaatg
      241 cgaaagcaag tcgttgtccc agttcggcgt ccagccggtc cacctcggca taggtggcgt
      301 ccaggtcgaa ccccgagtgc agcccctgga tccggagatg atcctcctcg ttgagcatca
      361 ccccgatccg gtcctgcacc agcagcgacg ccccggagcg gacccgccct tcgacctcga
      421 gccccgccag ttccttgctc accaggtgcc gttcgtgcag cagctgccgg tccagccggt
      481 ccagccggtc cagccggaac ttcgtggcct ggcgcaggag caccgactga cgcgcggccg
      541 cctccacggt cgtgagaatc ccttcccgct ccgtctccga attccgcccc tggaacacgt
      601 gctcggccag gttccgggcc agtcggatgc gcgtggacag caccaggtgg ctggccggac
      661 cgctggcgtc gagccagcca acgccgccgt ccgtcagcag gctgaggtcg atcattcgag
      721 cacccgcagg cgatcccgga gctcggctgc cagctcgaag ttttcggtct ccacggccag
      781 ccggagctgc tcccgcagcg ccgcggcccg atccttggcg gcggggtggt cggccgtcgg
      841 ccgctccccc tcagcgtatc gctcgcccag atgatgcgtg gaaccgtgca ggcgccgcaa
      901 caggtcacga aggggcgcct cgaaggtaac gtagcagtct gaacacccga gtctgccgct
      961 ctcccggaag tcctggtagc tggcgccaca cctggggcag gattcggcgg tcttcgggag
     1021 cgtcgcctgc tccgtgttct tccccatggc cgccaggaag ctgcccagcg gcgtcttcac
     1081 ggccgacccc gggctttcga cgcccttctc ggcggcgcat cgctcgcaga gatgcagggt
     1141 cgtcacctgc tcgttgacga tctgcgtgag gtggatgacg gcctcgcgct catgacattg
     1201 atcgcacgac atcagggcat cgactccaca cccggcagcg ggacgaggtg gcctccgtcg
     1261 agggaaagca cccggtccgc gcggccggcc agcaggcggt tgtgcgtgac gacgacgagg
     1321 gcggtttcga actcgcgcgc gaggcgcgcg aagagctcgt gcagccgctc gctgttccca
     1381 tggtcgagat tccccgacgg ctcgtcggcc agaaccacca gtggatcggt ggcgagcgcg
     1441 cgcgcgaccg ccgcccgctg ctgctcgccc ccggaaagcg ccgacggccg gtgggtcatg
     1501 cggcccgcga gccccacggc ggccaggagc tcctcggcac gggagcggga tgcgccctcg
     1561 tccacgccgg cgatcagcag cggcatcatc acgttttcga gcgcgctgaa ctcccgcagc
     1621 agatgatgga actggaacac gaacccgatt ttccggttgc ggatggctgc cagagcctcg
     1681 gcggtctgat cggcgtaggc ctgcccatcg agccggaccg tgccggccgt cggggcgtcc
     1741 agtgcgccca gcaggtggag cagcgtgctc ttgcccgaac cgctcgcgcc gacgatcgcg
     1801 acgaattccc cgcgggtcac gctgaggtcc acgctcgaga gcacctcgat cggggccccg
     1861 tcaccgccgc ggtacaattt gcgcaggccc tcggcctcca ggatggcgct cattcgtgcc
     1921 ggatcgcttc caccggggtc aggcccgccg ccgaccgcga cggatagagg gtggcgagta
     1981 cggctatggc caggctggca agcaccacaa cgaggacgtc ctcggcctcg acgtggaccg
     2041 ggaggtgatc gatgaagtag acggccggat tgatccggat ccatccggac ttgtccacca
     2101 cgtaggcgac cacgagcccg ccggcgagtc cgatcgccgt ccccacgccg ccgatcaccg
     2161 ccccctgcag caggaagatg cgcgcgacgg ccggcgacgt caggcccatg gcacgcagga
     2221 tgccgatctc gcgcgtcttg tcggccacca ccatggtcag cgtgcccaca atgttgaagg
     2281 ccgccacgac catgatgaag aagataatca ggcccatggc cagcttctcg agctggagcg
     2341 cgctgaacag gctggcattc tgcgtctgcc agtcaagcgc ccggtaggga tacccgagct
     2401 tcttctccag ctcctcgccg atgcgggggg cctcgtcggg gttttccacc cgtacggcga
     2461 tcccggagac ggcgtcgccg aggccggtga atttctgggc gagctcccgg ctgaccacga
     2521 cgaactggtt gtcgtactgg aacattccgg tatcgaacag gccggtcacc tcgaagcgcc
     2581 agaagcgggg caccgccact ccgatggcgg cgttcacctt ggcctgcgtg accggcacca
     2641 gagtgaccac gtcgccgggg tagaccgaga gccggttggc cagccgctcg ccgagcagaa
     2701 tgccgccgtc cacgttgggc ttggtggtgc ggaaggagag atcgcccttc ttgatcgatt
     2761 gcggcagcga ggtgaccgag cgggcccccg tgtccgggtc gaacccgacc agattcaccc
     2821 cttccccgta gtcctgtccg gccgtgatgc cggcctggct gatgacttcg ggcgaggcgg
     2881 cgacgacgcc cggctgcgcc cggaccacct ggagcacctt ccgccaatca tccatgcgga
     2941 gcccggcgcc gaaggtgagg atgcggagat gcgggttggc gaccaggatg cgctcccgga
     3001 gatcgttccg gagcccattc atgacgccga gcaccacgat gagggccatc acgccgacgg
     3061 cgacgccgcc cgtcgagatg accgtattca gcgacgcgac gtgcgacgtc cgccggctcc
     3121 gcagataccg ccgggcgatg cgccattcca gcggggacgg ccagcgcaac accgagccca
     3181 gcgtggcgcg ctcagaggcc tgtgggcggg ccatcaggcc tccggccgca tggcgggaaa
     3241 gagaatcacg tcgcggatgg acgcctgatc ggccaggagc atgaccagcc ggtcgatgcc
     3301 gagccccacc ccgcccgcgg gcggcatacc gtactccagc gcgcggatgt agtcggcgtc
     3361 gtacggctga gcctcctcgt tgccggccgc ccgctgctgc gcctggtcct cgaatcgccg
     3421 ccgctggtcg tcgggatcgt tgagctcgct gaaggcgttg gccaattccc ggccgccgac
     3481 gaacaattcg aagcgctcgg tcagggcggg gtcggtgcga tgctgcttgg ccagcgggga
     3541 gagcgccttg gggtagtcca gcaggaaggt gggctgcacc aggtgcggct cgagcacggt
     3601 cttgaagacc tcgtcctgga gccggccgcc cgacagtgcc gccgcctcgc cggcgtccat
     3661 tccagcggcc cgcaccacgg cccgcatctc ctcctccccg gcggtgcgga ggtccagccc
     3721 gcagcgctcg cggatcccct cgatgaactg cacccgggcg aagggaggcg tgaagtcgag
     3781 cgcgatgccg tcgcgctgaa gcacccgggt tcccaggcaa tgctcgatca cgccgctgac
     3841 caggccctcg accagccgca tcatgtcgcc gtagtcggcg tacgcctggt ag
//
LOCUS       DATIFF010001054         6775 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1057941, whole genome shotgun sequence.
ACCESSION   DATIFF010001054 DATIFF010000000
VERSION     DATIFF010001054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6775
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1057941"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..573
                     /locus_tag="VLD58_15360"
     CDS             <1..573
                     /locus_tag="VLD58_15360"
                     /inference="COORDINATES: protein motif:HMM:NF040149.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5700 domain-containing putative Zn-dependent
                     protease"
                     /protein_id="HSB55738.1"
                     /translation="LDTDQSGAVFANTVAHELHHIGLGAACDRAGEARYADTSAAAAK
                     ARNWLGAFGEGLAMLAAAGGPNVHPHRDSPPSERERWDRDSRDAAAQMVALERFFLSI
                     LNGRLTADSAITRQGMEFFGVQGPWYTVGYRMWSTVERRLGRARVVADACEPARLIVD
                     YDLAVAQDRSAPRWSPSFVRAMRALQAPRL"
     gene            667..1296
                     /locus_tag="VLD58_15365"
     CDS             667..1296
                     /locus_tag="VLD58_15365"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HSB55739.1"
                     /translation="MRVAKVTLVLAGLMGLVAAGASAQAAGKTYTKVPVGSGWRVDPA
                     HSEVGFRIRHLVGRVRGQFTDWEGIIVTKDTDWTHGTVNVTVRTKSINTGNPSRDMDL
                     RSPRFFAVDSFPTMTFESTGLVTSTDLGNNFEMSGLLTIKGHTHPVVFKGQYRGLQRD
                     MNGKERLAFDGTSYINRKDYGITWNQVVEAGNLLSDDVEIEISLEAVRQ"
     gene            complement(1381..2550)
                     /locus_tag="VLD58_15370"
     CDS             complement(1381..2550)
                     /locus_tag="VLD58_15370"
                     /inference="COORDINATES: protein motif:HMM:NF014342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanyl-tRNA editing protein"
                     /protein_id="HSB55740.1"
                     /translation="MTHRLYYTDSYLTEFTAQVVDTADDGRRVYLDQTALYPTSGGQP
                     HDLGSLGGVAVVGVVDEEDRIAHLVAAPLGQGEVQGVVDWRRRFDHMQQHTGQHLLSA
                     VLADLFNAPTVSVHFGPEMSTLDLGIESISPDQVRKAEERANQVITENRPVTVSFEDA
                     ATAIGLRKATDRSGTLRIVSIADLDRSACGGTHVRATGEIGALLIRRSERVKKQVRLE
                     FLCGLRATRRARTDFDLLSEVAAGASASVEEVPGVVAGLRAQLKAAQGARKQLADEAN
                     GYRAARLLESTAPGADGVRRIFAKPDSATTEDLRGLAQAATANAKVFFAGVVTDPPTL
                     VLAASADAGVDAGALLREILGQLGGKGGGNARMAQGGIPSPESLPALLRQAGFEA"
     gene            complement(2769..4586)
                     /locus_tag="VLD58_15375"
     CDS             complement(2769..4586)
                     /locus_tag="VLD58_15375"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB55741.1"
                     /translation="MSFAPGTVLDDRYEIGREIGRGGYSIVYLATDRTLGRQVAIKLL
                     VPPPSAAQTAKERLRREVLAARDLGHTNIVAIYDFVDAGERGSIVMEYIDGPDLALKV
                     AEGGPLPAEMAARVGREVALALSAAHRRGILHRDVKPSNILLDPDGRARLTDFGSAKL
                     EGMSSVTGTGALVGTLDYLAPEVVAGSRGDARADLYALGMTLYFLVTGRLPERPSPHL
                     PPPPSPDGHRPSVLRGDLPAWFDDAVACATTALPADRFSSAALLADALSLEPTGEWRV
                     PAKVSHYLTFCLLCGSDEPLGLGLCSGCAGAAPQELDGMVLVERPTSAAEREHTHARL
                     RHLTGTAATPAALEAASRGERVVARVPLAGAQRVLERLSAEGISARIARSGWAPLPTS
                     LYGVAGSMVLMGGLAGALVSPVLLYLSPLLSLVILLEAQRQVRQPLLKAPGTSGTLTG
                     PARERLALAVSRLPSGTALSLLADLARNAQAVLSRLPADAVLGIRSEVEELVVHACDA
                     AADLAELEDSLDRLERQRARPGRRTSGGWHTTVARVERSRDALVQKLLDAITTLGEAR
                     LRAVEATAADTDRLSELSHEMRAEVVRYAEARREMEALL"
     gene            complement(4583..5176)
                     /locus_tag="VLD58_15380"
     CDS             complement(4583..5176)
                     /locus_tag="VLD58_15380"
                     /inference="COORDINATES: protein motif:HMM:NF024572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSB55742.1"
                     /translation="MRLLHVLGLSYAAVCGVVTLKAMRPADSRGEPAAPVQPFVGDAG
                     EWFQQAKPFCNAVEVVTRIRFTPPPSGRDGVGYAAACYALAGNIDSARATLMTLPASD
                     REYASSIVFNIGHPVADAGDDRSAGPIMELVLEFEPDNYMALYHAGMSEYTLGQADRA
                     RVSLRRFIDLYHENDGWRGNAVEVLGRLEKADEKVEK"
     gene            5459..>6775
                     /locus_tag="VLD58_15385"
     CDS             5459..>6775
                     /locus_tag="VLD58_15385"
                     /inference="COORDINATES: protein motif:HMM:NF021665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="G8 domain-containing protein"
                     /protein_id="HSB55743.1"
                     /translation="MRYSALRLILLSALAVAACSPDSSPTDPGGIPTGAAKAWSDPAT
                     WPSGAVPVQGDSVVIPEGTTVRLDVSPPALQSLTVRGSLVFANTDLSLTSGWVVVIGA
                     LQVGTENSPYTHRAVITLTGTGAANNPSVYGMGNKVLGVSGRIELHGQTRKGWTRLSQ
                     TAAAGATTIELVTNPGWKAGDRLVLASSDYSPDKTDEAVVASVSGRTLTLSAPLKYEH
                     YGDVVTVSGVTVDERAEVGLLSRNITIQGDTGSTPGYGGHIIILGGATAHIEGVELFQ
                     MGQRGQLARYPMHWHMAGDVSGHYFRNNSVWRTFNRCVTVHGSDNSVVQDNVCYDHTG
                     HGYFMEDGAETGNLIEGNLGISSRVPSGTDRLLGSDSRPATFWITNPDNTIRGNVAAG
                     SKGFGFWCAFPASPTGLSVGQPDLPRTTPLREFSANIAHSNNSGGLN"
BASE COUNT         1088 a         2360 c         2289 g         1038 t
ORIGIN      
        1 ctggataccg accagagtgg cgccgtcttt gccaacaccg tcgcgcatga gctgcatcac
       61 attggcctgg gcgcagcctg cgaccgggcg ggtgaggccc ggtatgccga taccagcgcc
      121 gccgccgcga aagcgcgcaa ctggctcggt gccttcggcg agggactggc gatgctggca
      181 gccgccggtg gcccgaacgt tcacccgcac cgggacagcc ccccgtcgga gcgcgaacga
      241 tgggaccggg acagccgcga cgcggcggcc cagatggtgg cactggagcg cttcttcctg
      301 tcgatcctga atggccggct gaccgccgat tcggccatca cccggcaggg tatggagttc
      361 ttcggggtcc aggggccctg gtatacggtg ggctatcgga tgtggagcac tgtcgagcgg
      421 cgcctgggac gagcccgggt agttgccgac gcctgcgaac cggcccggct gatcgtcgac
      481 tacgacctgg cggtggctca ggaccggtcc gcgccccgct ggtctccttc ctttgtaagg
      541 gcgatgcgcg cgctccaggc accccgatta tgaaggcctt cacatgaacc atccacacag
      601 ccttaccatg gccagcccca tactcttcct gacaactcgg gaaacccttg tttcgggaga
      661 caggatatgc gcgtcgcgaa ggtcacgttg gtgctggctg gcctgatggg cctggtcgcg
      721 gccggggcat cggctcaggc cgcgggcaag acctatacaa aggtcccggt tggctccggc
      781 tggcgggtcg atccggccca ctccgaggtc ggcttccgga tccgccacct ggtaggccgg
      841 gtgcggggtc agttcactga ctgggaaggg atcatcgtca ccaaggacac cgactggacc
      901 cacgggaccg tgaacgtgac ggtgcgcacc aagagcatca acaccgggaa cccgtcccgt
      961 gacatggacc tgcggtcgcc tcggttcttc gccgtcgaca gcttcccgac catgaccttc
     1021 gagagcaccg gcctcgtcac cagcaccgac ttgggcaaca acttcgagat gagcgggctc
     1081 ctgactatca agggccacac ccatcccgtg gtcttcaagg ggcagtaccg ggggctgcaa
     1141 cgggacatga acggcaagga gcggctcgcc ttcgatggca cttcttatat caatcggaaa
     1201 gactacggga tcacctggaa ccaggtggtg gaggcgggaa acctgctgag cgacgacgtg
     1261 gagatcgaga tttcgctgga agcggtccgg cagtagtccc gacccgagcg taccggcccg
     1321 gcgcctcatc ggaggagccg ggccggtttc catatccggt ttccatatat ggagacgagg
     1381 ctaggcctcg aagcccgcct gccggagaag tgccgggagg ctctcgggtg acgggattcc
     1441 gccctgtgcc atccgcgcgt tcccgccccc cttgccaccc agttgcccaa gaatctcccg
     1501 gaggagcgcg ccggcatcga ctcctgcgtc ggccgacgcg gcaaggacca gagtcggcgg
     1561 atccgtgacc accccggcga agaagacctt ggcgttcgcc gtcgcggcct gcgccaggcc
     1621 cctgagatcc tcggtcgtgg cgctatccgg cttcgcgaat atccgccgga ccccgtcggc
     1681 tccgggcgcc gtgctctcga gcagccgtgc ggcccggtag ccattggctt cgtccgccag
     1741 ctgcttccgg gcaccctgcg ccgccttgag ctgggcccgg agcccggcca ccacccccgg
     1801 aacctcctcc accgacgccg aggcgcccgc cgcaacctcc gacagcaggt cgaagtcggt
     1861 ccgggcccgg cgggtcgccc gcaggccgca gagaaactcg agccgcacct gtttcttgac
     1921 ccgctcgctc cgccggataa ggagggcgcc gatttcgccg gtggcgcgca cgtgggtgcc
     1981 gccgcaggca cttcggtcga ggtcggcgat gctcacgatc cggagtgtgc cgcttcgatc
     2041 ggtggccttc cggagcccga tagcagtggc tgcatcctca aagctcaccg tgaccgggcg
     2101 gttctcggtg atcacctggt tggcccgctc ctccgccttc cggacctggt ccggcgagat
     2161 cgactcgatt cccaggtcga gggtggacat ctccggtccg aagtggacgc tgacagtggg
     2221 agcattgaac agatcggcga ggaccgcact caacaggtgc tggccggtat gctgctgcat
     2281 gtggtcgaac cgccggcgcc agtcgaccac gccctgcact tcaccctgcc cgagcggagc
     2341 cgccaccagg tgcgcgatcc ggtcctcctc gtccaccacc cccaccactg caacaccgcc
     2401 caggctgccc aggtcgtgcg gctgcccgcc ggatgtggga tagagagccg tctggtccag
     2461 gtacactcgg cggccgtcgt cggcggtgtc gacgacctgg gccgtgaact cggtgaggta
     2521 gctgtcggtg tagtagagcc ggtgggtcat cccgggaaat ataggaaccc gccgtcatcc
     2581 cgagcggagc gagggaaccc cctgatacct ggtgttcggg cggaccgaag atcgtgctgg
     2641 ggtgcgggtc gaggggtgcg ggtgctggat ccgcaggcgc gttagctcct atccctgtct
     2701 tcgtcccctg aatatcgaga gctacagcgc caaggggcca gccacccgca ccccgaggcc
     2761 cgtccgccct acagcagggc ttccatctcc cgcctggcct cggcgtagcg caccacctcg
     2821 gcccgcatct catggctcag ctccgagagc cggtcggtgt ccgccgcagt cgcctcgacc
     2881 gcgcggaggc gggcttcgcc cagggtggtg atggcgtcga ggagcttctg caccagcgca
     2941 tcccggctcc gttccactct tgccacggtc gtgtgccagc cgccggaggt gcggcggccc
     3001 ggtctggccc gctgccgctc cagccgatcg aggctgtctt ccagctccgc gaggtcggcc
     3061 gcggcgtcac aggcgtgcac caccagctct tccacctcgc tgcggatccc gaggacggca
     3121 tctgccggca ggcggctcag caccgcctgg gcattgcggg ccagatcggc gagcagcgag
     3181 agcgccgttc cactcggcag ccgcgagacg gcgagcgcca gccgttcgcg agccgggccg
     3241 gtaagcgtcc cactcgtccc gggcgccttg aggagcggct gacgcacctg ccgctgcgcc
     3301 tcgagcagga tcaccagcga gaggagcgga ctgagataga gcaggaccgg ggagaccagc
     3361 gctccggcga ggccgcccat gagcaccatc gacccggcaa ccccgtagag actggtcggc
     3421 agtggcgccc aaccagaacg tgcaatccgg gcgctgatcc cttcggccga gagccgctcc
     3481 agcacccgct gggccccggc cagcggcacc cgcgccacca cccgttcgcc ccgcgaggct
     3541 gcctcgagtg cggccggcgt ggcggcggtg ccggtcaggt gccggagccg cgcgtgggtg
     3601 tgctcccgct ccgccgccga ggtcggacgc tccaccagca ccatgccgtc gagttcctgg
     3661 ggcgccgcgc cggcgcagcc gctgcagagg ccgaggccca gcggctcatc gctgccacag
     3721 agcaggcaga aggtgaggta gtgcgacacc tttgcgggca cccgccattc accggtcggc
     3781 tcgagcgaga gtgcgtcggc caggagcgcc gccgaggaaa agcggtcggc gggaagggcg
     3841 gtggtggcgc aggcaaccgc atcgtcgaac cacgccggca ggtcgcctcg caatacggaa
     3901 ggacgatggc cgtccggcga aggcgggggt ggcagatgcg gcgagggccg ttccggcagc
     3961 cgtccggtca ccaggaaata cagcgtcatg ccgagggcgt agagatcggc ccgggcatcg
     4021 ccgcggctcc ccgctaccac ttcaggtgcc agatagtcga gggtgccgac cagcgcgccg
     4081 gtcccggtga ccgaggacat accctcgagc ttggccgacc cgaagtcggt gagccgggcg
     4141 cgtccgtccg ggtcgagcag gatgttcgaa ggcttcacgt cacgatggag aatcccgcgc
     4201 cggtgcgccg cggaaagggc cagcgccacc tcccgtccca cccgtgccgc catctcggcc
     4261 gggagtgggc caccctccgc caccttgagg gccagatcgg gtccgtcgat gtactccatc
     4321 acgatgctgc cgcgctcgcc ggcatcgacg aagtcgtaga tcgccacgat gttcgtgtgg
     4381 cccaggtcgc gggccgccag cacctcccgg cggagccgct ccttggcggt ctgcgccgcc
     4441 gacggcggcg gcaccagcag cttgatcgcc acctggcggc cgagcgtccg gtcggtggcg
     4501 agatagacga tcgagtaccc gccacggcca atctcccgcc cgatctcgta gcggtcgtcg
     4561 agcacagttc cgggagcgaa gctcacttct ccaccttctc gtccgccttc tcgagccggc
     4621 ccaggacctc gaccgcgttg ccgcgccagc cgtcgttctc gtggtacagg tcgatgaagc
     4681 gccggagact cacccgggcg cgatcggcct ggcccagggt gtactccgac atccccgcgt
     4741 ggtagagcgc catgtagttg tcgggctcga actccagcac cagctccatg atcgggccgg
     4801 ccgagcggtc gtcgcccgca tccgccaccg ggtggccgat gttgaagacg atcgatgagg
     4861 cgtactcccg gtcgcttgct ggaagcgtca tgagggtggc acgggcgctg tcgatgttgc
     4921 cggccagggc gtagcacgct gcggcgtagc ccacaccgtc ccgcccgctc gggggagggg
     4981 tgaagcggat ccgggtgacg acctcgacgg cgttgcagaa gggcttcgcc tgctgaaacc
     5041 actccccggc atcgcccaca aagggctgta ccggagccgc cggttcccca cgggaatcgg
     5101 ctggccgcat tgccttcaga gttaccacgc cgcaaaccgc ggcgtagctc agccccaaca
     5161 cgtgcagaag acgcactgaa acctctacga cagcgggaga tgcgcgggag acgcggaagc
     5221 gctcccattg gacacggggg tgaggggcaa cccttgggcc acgccgcccg tgatctgggt
     5281 cacaccggac gttcgaaagc ctgacactgt aagaatctgt gagttgctgc gaaggcggct
     5341 ccggtccgat actgtagcgt ctcgcttcat catccctgca caactccgga gtcgattccg
     5401 ccttctccga ggcgggcccg gcagttcaac tcggaactcg gcgcctctcg aggtccccat
     5461 gcgttattcc gccctccggc tgatcctcct cagcgcgctg gctgttgccg cctgttcccc
     5521 cgactcgagc ccgaccgatc ccggtggcat cccgaccggc gcggccaagg cctggtccga
     5581 tccggccacc tggccgagtg gcgcggtgcc ggtgcagggg gactcggtgg tgattccgga
     5641 ggggaccacc gtgcggctcg acgtgagccc gccggcgctc cagagcctga cggtccgggg
     5701 ctcgctcgtc ttcgccaaca ccgatctgtc gctgaccagc gggtgggtgg tggtgatcgg
     5761 cgcgcttcag gtcgggaccg agaattcgcc ctacacccat cgggcggtca tcactctgac
     5821 cggcaccggc gcggcgaaca atcccagcgt ttacgggatg gggaacaagg tcctgggggt
     5881 gagcgggcgg atcgagctcc acgggcagac ccggaagggc tggacccgcc tgagccagac
     5941 cgcggcggcc ggcgccacca cgatcgagct ggtaaccaat ccggggtgga aggcgggcga
     6001 ccggctggtg ctcgcgtcga gcgactacag ccccgacaag accgatgaag cggtggtcgc
     6061 cagcgtcagc ggccggacgc tcacgctctc ggctcccctc aagtacgagc actatggcga
     6121 cgtggtgacc gtgagcggcg tgacggtcga cgagcgggcc gaggtgggcc tcctcagccg
     6181 gaacatcacg attcagggcg acaccggctc taccccgggc tacggcgggc acatcatcat
     6241 cctgggtggg gccaccgcgc atatcgaggg tgtcgagttg ttccagatgg ggcagcgggg
     6301 ccagctggcc cgctatccca tgcactggca catggccggc gacgtgagcg ggcactattt
     6361 ccgcaacaac agcgtctggc gcaccttcaa ccgctgcgtc accgtgcatg gctcggacaa
     6421 ctcggtggtg caggacaacg tctgctacga tcacaccggg cacggctact tcatggaaga
     6481 cggggccgag accggcaacc tgatcgaggg caacctcggg atctcgtccc gggtgccgag
     6541 tggtaccgac cgtctccttg ggagcgacag ccggccggcc accttctgga tcaccaatcc
     6601 tgacaacacc attcgcggca acgtcgcggc cggcagcaag ggcttcggct tctggtgcgc
     6661 cttccccgcc tcgccgacgg ggctatcggt cggacaaccg gacctgcccc gtaccacgcc
     6721 gctccgcgag ttctcggcca acatcgccca cagcaacaac agcggggggc tcaac
//
LOCUS       DATIFF010001055         2688 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2134063, whole genome shotgun sequence.
ACCESSION   DATIFF010001055 DATIFF010000000
VERSION     DATIFF010001055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2688
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2134063"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            515..1465
                     /locus_tag="VLD58_15390"
     CDS             515..1465
                     /locus_tag="VLD58_15390"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HSB55744.1"
                     /translation="MDAGRLATGLAATPAIPGLRSILVVRHGRLIAEQYTAHGGADSL
                     YALRSVTKSVMSLLIGSAIQRGDISGTDQTLGELFRPPLPSLAPADAAITIGDLLTMT
                     GGFQWDEVGVTEYNNWVLAPDQIDYLLARPIVSPPGTTFNYNSAAVHLLSAVLEVDAG
                     GTAAFADSGLFAPLGIHARDWELDNRGIPNGGAGLYLRPRDIAKIGQLVLQRGRSGAT
                     AVVPQSWVDEATRNHIATGGGLGSLGPMWYGDLWWLGSAAGHDFVLARGYGGQLVYIV
                     PDLDLVVVTTATWQGLGGGAEAQAAAIAGLIVSGILPSVR"
     gene            complement(1515..1649)
                     /locus_tag="VLD58_15395"
     CDS             complement(1515..1649)
                     /locus_tag="VLD58_15395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55745.1"
                     /translation="MRTIVRLVELAAFLALVWLAVSCLRYLAGEPWSSILARPLGFIP
                     "
     gene            2032..2430
                     /locus_tag="VLD58_15400"
     CDS             2032..2430
                     /locus_tag="VLD58_15400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55746.1"
                     /translation="MFGATVGADTPTRADLAALWGRVLLAVGLGALMTQWPYSHTCDL
                     PLLGYLCAVAMVLLAGGWIACESWRLRNGPAHIVSLILIFWGIVLAGEQLLPRIGYAA
                     DQGRWRCPTIGQAATPSGAARAKSAAGRAR"
     gene            complement(2496..>2688)
                     /locus_tag="VLD58_15405"
     CDS             complement(2496..>2688)
                     /locus_tag="VLD58_15405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55747.1"
                     /translation="ERSHHGLAEKTGIGAAAGAVVGAITGAGVVKGAVVGAGGGLAWG
                     LFGGGKQIGRDTRVEFQSK"
BASE COUNT          414 a         1000 c          866 g          408 t
ORIGIN      
        1 gaagctggcg ggggtcgcga gcttgatgaa cgacttggcg gttcgcgtgg cgaatctgga
       61 ccatcgagtc gtggtgaacc acaccaaacc ggatcccgcg gcaccctgcc gccaataagt
      121 ccgccgtggc ccggcgcagg atgccgctga cggaaacgaa gccgccgccc agagggcggc
      181 ggcttcgcag aacgacgatc ccacttcggg tcaagcggcc agtgccgcca ccgccaccgc
      241 gcacaacatg ccgacgagga cgattgctat caccacctca atgagcgcca gccctccaag
      301 gccttcgcga ttgggcaccg ttgtctctcc gggaccggta gacccttcaa agctaagcag
      361 ggcgctggcg ttcgccagac gctgcctccc cgtcctcctc gcgaccgccc tggcctgtgg
      421 ggaaaccgcc acctccccct ccaccccacc gactacagcc gaccctattg acctgtcggc
      481 cgattgggtc acagccccgc cggctgcgga gggtgtggat gcgggcaggc tcgccaccgg
      541 tcttgccgcc acgcccgcaa tccccggctt gcggagcatc ctcgttgtcc gccacggccg
      601 tctgatcgcc gagcagtaca cggctcatgg cggcgcggac tcgctctacg cgctccgctc
      661 cgtcaccaag agcgtcatgt ccctgctgat cgggagcgcg atccagcgcg gagacatcag
      721 cggcaccgac cagaccctgg gggagttgtt ccgcccgccc ctcccctccc tcgccccggc
      781 ggacgccgcg atcacgatcg gcgacctgct caccatgacc ggcggctttc agtgggacga
      841 agtcggcgtg accgagtaca acaactgggt gctggcgccg gaccagatcg attacctgct
      901 tgcccgaccg atcgtctcgc cgcccggcac gaccttcaac tacaactcag cagccgtgca
      961 cctcctctcc gccgtgctgg aggtagacgc tggcgggaca gccgcctttg cggacagcgg
     1021 ccttttcgcc ccgctcggca ttcatgcccg cgactgggag ctcgacaacc ggggcatccc
     1081 caatggcggc gcgggactct acctccggcc gagggatatc gccaagatcg gccagctggt
     1141 gctccagcgc ggacgctcgg gcgccacggc ggtcgtgccg cagagctggg tggacgaggc
     1201 gactcggaac catatcgcga ccggcggggg actgggctcg ctcggaccca tgtggtacgg
     1261 cgatctgtgg tggctgggca gcgcggctgg ccacgacttc gtgcttgccc gaggctacgg
     1321 cggccagctc gtctacatcg tgccggacct cgatcttgtg gtcgttacca ccgccacctg
     1381 gcaaggcctg ggaggcggtg ccgaggcgca ggcggccgcc atcgcggggc ttatcgtaag
     1441 cggcatcctc ccttccgtac gctaggcgcg caccccactc ctccctttcg ctctagccca
     1501 ctctctctcc gcgcttaggg aatgaagccg agaggccgcg ccagtatcga cgaccaaggc
     1561 tcgcccgcca ggtagcgaag gcacgacacg gccagccaca ccagcgcgag aaaggcggcc
     1621 agctcgacca gacggacgat ggttcgcatg cgggctccaa tccggggtct gcaggggctt
     1681 gcagagcgcg ccctgcaatc cggggcaagt tgccagagcg caggaagggt cagcgccggg
     1741 ttgtgcgctt gcacaggccg cgataatccg cccggcacac gcggttacaa tttcggcgag
     1801 gtggctggta tgacaagtgc ggcacgcccg gagggacctc cgtcgacatc ccccgactcc
     1861 tcgcggaacc gactgatggc gaaccttcca tccggccgcc ggccggatcc catggcgcga
     1921 gaggtggatc gcctgctcgc acagcttgcc ggccctggac ccgcacccga ccgcgatcga
     1981 gtcgcgccgg gtgccaacgg caatgtccct cgcccgaaca gccgcccgag agtgttcggc
     2041 gcgacggttg gcgcggacac cccgacgcgc gccgatctcg ccgcgctctg gggacgcgtg
     2101 ctcctcgcgg tcggcttggg cgcgctgatg acgcagtggc cctattccca tacctgcgac
     2161 ctgcccctcc tcggctacct ctgcgcggtg gcgatggtgc tgctcgcggg cgggtggatc
     2221 gcatgcgagt cctggaggct gcgcaacggg ccggcgcaca tcgtgtcgct cattctgatc
     2281 ttctggggga tcgtgctggc cggcgagcag ctgctcccgc gcatcggcta cgccgcggat
     2341 caggggcggt ggcgctgtcc gacgatcggc caggcggcaa ccccctccgg ggcagcccgg
     2401 gccaagtccg cggccggccg cgcccggtga gaaacgccgc cggcaccgac ccgcccccac
     2461 cctcgtagcc aggggcagcc ggggagccgg ggcgtctact tgctctggaa ctcaactctc
     2521 gtgtcccggc cgatctgctt tccgcctccg aagagccccc acgccaggcc acctcccgcc
     2581 cccaccactg cacccttcac cacgcctgcg ccggtgatgg cgcccacaac cgccccagcg
     2641 gcggcaccga tcccggtttt ctcggcgagc ccatggtgac tccgctcg
//
LOCUS       DATIFF010001056         1239 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1672007, whole genome shotgun sequence.
ACCESSION   DATIFF010001056 DATIFF010000000
VERSION     DATIFF010001056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1239
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1672007"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..445
                     /locus_tag="VLD58_15410"
     CDS             <1..445
                     /locus_tag="VLD58_15410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55748.1"
                     /translation="QAQGRHLDHRLDFYSLGVTLYRAATGELPFNAGDWFELARMHVE
                     DPPPSLRRKRPEISKRFERVVVKCLAKHPDDRYQNAAELEADLDDVREGARPTTDVGT
                     APLTSTEYQALRDAHTPTRWGQLITFILVGAALIAAIALLIRLMR"
     gene            complement(429..827)
                     /locus_tag="VLD58_15415"
     CDS             complement(429..827)
                     /locus_tag="VLD58_15415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55749.1"
                     /translation="MASSSSSAIRTLLQDYVGGRVPADRLVPAIAEQYYRSDAGRDGL
                     RPLMDVIERAAPGIVQLARVSEGPGFDIRLAERPFPAAYEGELRQAARAVLEAGTALA
                     GGPGREAPATGGGFWSRFLGRVRRLFSAST"
     gene            complement(799..>1239)
                     /locus_tag="VLD58_15420"
     CDS             complement(799..>1239)
                     /locus_tag="VLD58_15420"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HSB55750.1"
                     /translation="GTDDNPPLSHERIPLGTAVVDGGSYTWDAIRAVLGGLGQLVLGR
                     VSFRQSLAGPIEIASVSGQVARLGIDRFLDLLGFFSINLAVLNLLPIPVLDGGQLVFL
                     VAEGIRRRPLSLELRLRLTQVGFVFLLGLMSLAVVNGIFKFFGH"
BASE COUNT          222 a          450 c          404 g          163 t
ORIGIN      
        1 acaggcgcag gggcgtcacc tggaccaccg gctggacttc tactccctgg gtgtcaccct
       61 gtaccgcgcc gccaccgggg agctgccgtt caacgccggt gattggttcg agctggcgcg
      121 catgcacgtg gaggatccgc cgcccagcct gcgtcgcaag cggccggaga tctcgaaacg
      181 gttcgagcgc gtggtggtga agtgtctcgc caaacacccc gacgaccgct atcagaacgc
      241 tgccgagctc gaagccgatc tcgacgacgt gcgcgaaggc gcgcggccga ccaccgacgt
      301 cggtaccgcc ccgctgacca gcaccgagta tcaggccctg cgggacgcgc acacccccac
      361 ccgctggggt cagctcatca ccttcatttt ggtgggagca gcactgatcg cggcgatcgc
      421 gttgctgatc aggttgatgc gctgaacagt cgccgcaccc ggcccaggaa ccgcgaccag
      481 aacccgccgc cggtcgcggg cgcctcgcgc cccggcccgc ccgccaacgc agttccagcc
      541 tcgagcaccg cccgtgccgc ctgacgcagc tcaccttcat acgccgccgg aaatgggcgc
      601 tcggccagcc ggatgtcgaa cccggggccc tcggagacgc gcgccagctg cacgatgcca
      661 ggcgcggcgc gctcgatgac gtccatcagc gggcgcagcc cgtctcgacc cgcatccgat
      721 cggtagtact gttcggcgat cgccggcacc agccggtcgg cggggacgcg tccgccgacg
      781 tagtcctgga gcagggtcct aatggccgaa gaacttgaag atgccattga ccaccgccag
      841 gctcatgagt ccgaggagga agacgaagcc gacctgcgtg agccgcagcc gcagctcgag
      901 cgagagtgga cggcgacgaa tgccttcggc caccaggaac acgagctgtc ctccatccag
      961 caccggaatc ggcagcaggt tcaggacggc caggttgatc gagaagaacc cgagcagatc
     1021 gagaaagcga tcgatgccga ggcgggccac ctgccccgac accgaggcga tctcgatcgg
     1081 gccggccagc gactggcgga acgacacgcg gccgagcacc agctgcccca gcccgcccag
     1141 cacggcccgg atcgcgtccc acgtgtagct cccgccatcg acaacggccg tgcccagggg
     1201 gatccgctcg tggctcagcg gcggattgtc gtccgttcc
//
LOCUS       DATIFF010001057         9413 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1981078, whole genome shotgun sequence.
ACCESSION   DATIFF010001057 DATIFF010000000
VERSION     DATIFF010001057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 9413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9413
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1981078"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            188..949
                     /locus_tag="VLD58_15425"
     CDS             188..949
                     /locus_tag="VLD58_15425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSB55751.1"
                     /translation="MIRFTDVYKSFGAKSVLAGFTLDIPDNETTVIIGFSGSGKSVAL
                     KHIVGLMQPDAGSVEVDGQTVGELDRDELDRLRGRVGYVFQFAALFDSMTVAENIRLG
                     LVRRGLDPDTIQTRIRESLALVDLPGAEDRMPAELSGGMRKRVGIARAIALRPSYILY
                     DEPTTGLDPVTSAVIDELMVRARQELGVTGVVVTHDMRSAYTVGDRIAMLYQGKIRQV
                     GTIDEIRHTDDPVVRNFIEGRPADTDRLLTTGASA"
     gene            946..1950
                     /locus_tag="VLD58_15430"
     CDS             946..1950
                     /locus_tag="VLD58_15430"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HSB55752.1"
                     /translation="MKRRNEFLVGLVLLLSLAVVVAGALWLSEANVGRRESDHVARFR
                     TVGGLTPGAPVTYRGVRVGRVQAIRLADEFVEADLRVFQGVELPARPAVIAASQSLFG
                     EWSATIVSRDQPQDDPNVREMLAETSRPGGDRWPGATLPDVGQLTAQAGRIATDIASV
                     ANRVQEAFDSSAVIELRRSIKDFGEIADRLVKFTNSQTGRLNEVTGNVERTSDAVLSA
                     SQDLRSTLSRVDSATNNGQLQQIIENTRAGSGDLRQASADLKGIISTVKGQDTSIVRI
                     LVAADSALTRLQQGQGTLGLLSKDPALYNETIETMQELRRLIADIQMNPRKYFKFSVF
                     "
     gene            2084..2680
                     /locus_tag="VLD58_15435"
     CDS             2084..2680
                     /locus_tag="VLD58_15435"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HSB55753.1"
                     /translation="MAVATTVLMSKKKSKAEREVSAGGIVFRRQADRSARFLLIRDPY
                     EHWGFPKGHLEGEETPAAAALRESAEETGLVDLQLHGPIRIIDWHFRFRGRYIHKFCH
                     FFLFESPAAEVIPQLDEGITDFRWLTLEEALDLLSYDNARGVLKRAGEMARTLVAMGA
                     GRPRKHPAAPDPKPQASAVAEESDVPPTAPALTETPER"
     gene            2682..3455
                     /locus_tag="VLD58_15440"
     CDS             2682..3455
                     /locus_tag="VLD58_15440"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSB55754.1"
                     /translation="MPVVAAIVGAGEAAQALRRSLPPGGPWNLVTCRDAAALHRTLES
                     RLVDAVVFNPTLLPPHGLETLAARFPGIPRVVLAPFKPDDGQLLLDCRAVGIAQVLVL
                     GVDNAVAGELVIRVSAAAERRRALAEAVRVLRLKEPLQRDVWSDLLDRVDRPIRTAEL
                     AKRAGCTREHLSREFAAGGAPNLKRVIDLTRVACAAAMLRNPGYEVATVASILRFATP
                     SHLNATARRIAGVSSRGLAGLGPKGVLANFARGKTRSRV"
     gene            3676..5253
                     /gene="atpA"
                     /locus_tag="VLD58_15445"
     CDS             3676..5253
                     /gene="atpA"
                     /locus_tag="VLD58_15445"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018003165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HSB55755.1"
                     /translation="MATESVLRPGELKDVLLREIEKADLASVDVNEVGTVLEVRDGVA
                     RIYGLNKALAGEMLEFTAAETGDVVTGMALNLEEDNVGAVVLGDYLKLKEGDEVRCTG
                     RLLEVPVGPGMLGRVVNALGQPVDGRGPIAASGARAVEMVAPGIIVRQPVKEPLQTGI
                     KAIDAMIPIGRGQRELIIGDRGTGKTAIAVDTIINQKGTGVICVYVAIGQKRSTVATV
                     VEKLKERGAMEYTIVVVASASDPAPLQYIAPYSGCAIAEYFMYEEGKPTLCVYDDLSK
                     QAAAYRQLSLILRRPPGREAYPGDVFYLHSRLLERAAKISENPDVVKLDSRIKKPGGS
                     LTALPIIETQAGDVSAYIPTNVISITDGQIFLTTDLFYSNVRPAVDAGISVSRVGGNA
                     QIKAMKQVAGPLRLALAQYRELEAFAQFGSELDAATQRQLARGARTVEVLKQPQYSPV
                     PVERQVAIIYAVTNGYLDDIEVKNIRKWEADFLSYLSASQPAVLDGIRTKKALDDDLT
                     GKLKAAIAAFKPMFRAE"
     gene            5255..6142
                     /gene="atpG"
                     /locus_tag="VLD58_15450"
     CDS             5255..6142
                     /gene="atpG"
                     /locus_tag="VLD58_15450"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit gamma"
                     /protein_id="HSB55756.1"
                     /translation="MPASNKALRGRMRSVQNTRKITRTMELVSTSKLKRAQDRVVSAR
                     PYAAALAEVIGDLVTPDLAERFPLLRRPAPPGKGGPSRAALLLITSNRGLAGGFNANL
                     IKEARKRIEQLESQGYTVDLHLVGRKGIGFFKYLGRAAASQRIDIGDKPTAAHAAELV
                     AGLIDEYANGRLASLEVVYAKFVSPISTPPTTLRVLPVEPPAKKKGGLQADYILKPSA
                     DQILEQLLPLYVRNQVYRGLVETAAAEHGARRTAMKNATDNAGEIYEILKRTYNRQRQ
                     AAITQEIAEIVGGAAALEG"
     gene            6236..7666
                     /gene="atpD"
                     /locus_tag="VLD58_15455"
     CDS             6236..7666
                     /gene="atpD"
                     /locus_tag="VLD58_15455"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HSB55757.1"
                     /translation="MATATAATNIGRVVQVIGPVLDVEFEPENLPEIYNALVLEDSTG
                     ALPIRLTAEVQQHIGQNQVRAVAMSSTDGVVRGMKVVDTGAAISVPVGSAPLGRILNV
                     LGEPVDGGAPIPASNERWPIHRETPKFVDLEPKTQIFETGIKVIDLIAPFVKGGKIGL
                     FGGAGVGKTVVIMELINNVAKGHGGKSVFCGVGERTREGNDLYLEMEESGVIKSCALI
                     YGQMNEPPGARLRVGLSGLTVAEYFRDMEGQDVLLFIDNIFRFTQAGSEVSALLGRMP
                     SAVGYQPTLATEMGDLQERITSTKKGSITSVQAIYVPADDLTDPAPATAFAHLDATVV
                     LSRAISELGIYPAVDPLDSSSRILDAQYLGDRHYNVAIGVQRTLQKYKSLQDIIAILG
                     MDELSEDDKLIVARARRIQRFLSQPFFVAQQFTGFEGKYVKLADTIESFERVLAGEFD
                     DLPEQAFYMVGGIDEAVEKAKKLASS"
     gene            7666..7926
                     /gene="atpC"
                     /locus_tag="VLD58_15460"
     CDS             7666..7926
                     /gene="atpC"
                     /locus_tag="VLD58_15460"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit epsilon"
                     /protein_id="HSB55758.1"
                     /translation="MRVTVISPEAAIFDGEADSVIAPAFDGQVGILPRHAPFMTLLGR
                     GPLEVKAGAETHRFAVDGGFLQAVNNTVRIVAEQVKGAGNAS"
     gene            7916..8533
                     /locus_tag="VLD58_15465"
     CDS             7916..8533
                     /locus_tag="VLD58_15465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55759.1"
                     /translation="MRRKLWLAILVLALGGTGVASAQTLGTPIFKGPYRAFKSNELGG
                     YISDPGDGISFALEGEYRRADRRGRFDWGLRFGYMDPQGNGDGIFAIGADVRAPVARH
                     TQDFPLDASVTAGFGALFSNGNSGFLVPLGITLGRQVLLEGSNISFVPWVHPVIAPSF
                     GDLYDGAQFGLGLGVDINLSRTWDARLSGALGDLDGFGVGLAWHR"
     gene            8736..9395
                     /locus_tag="VLD58_15470"
     CDS             8736..9395
                     /locus_tag="VLD58_15470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55760.1"
                     /translation="MKVRVFPGVFAVAGLVLGAGVMQAQGVTGLPVRNSGLVSGLTIG
                     GEVGFPNADYGKGTAFGARGALGLGPFGVSAVISRWNPDGPADAQTGVGGYLNYKVFG
                     GPLVPFSVTLQGGAEYTSNGGIKQLHAPIGLGIGLRIPNPALAIKPWIAPRLDIARVS
                     GTGIKSDTETNFGISGGIDLSLLGGLSFGAAYDRTFVGNGVNPSVFSAGASYTIKIPG
                     L"
BASE COUNT         1561 a         3190 c         3172 g         1490 t
ORIGIN      
        1 gtggtgctcg gctgcgaagc gatcctggtg ctcgacgcct tctgggcgct ggtgctcctg
       61 tgagggcggc aaggcggcag ggcggccaag cggcaagatg tgcgcaacgt ggcagtgatc
      121 ttggcgcccg ttcattcacg cgagtgaggc ctctggccgc cttgccgcct tgccgccttg
      181 ccgcctgatg atccgcttca ccgacgtcta caagtcgttc ggcgcgaagt ccgtgctcgc
      241 gggcttcacg ctcgatattc ccgacaacga gaccactgtc atcatcggct tctcgggctc
      301 cggcaagagc gtggcgctca agcacatcgt gggactgatg cagcccgacg ccggaagcgt
      361 ggaagtcgac ggccagaccg tcggtgagct ggatcgcgat gagctcgatc ggctgcgcgg
      421 cagggtggga tacgttttcc agttcgccgc gctcttcgac tcgatgacgg tggcggagaa
      481 catccgactg ggcctggtgc ggcggggcct cgacccggac accatccaga cccggatccg
      541 cgagagtctc gcgctggtcg atctccccgg cgccgaggac cggatgccgg ctgaactgtc
      601 gggcggcatg cgcaaacggg tcggcatcgc gcgcgcgatc gcgctccggc cgagctacat
      661 tctgtacgac gagccgacca ccgggctcga tccggtcact tccgcggtca tcgatgagct
      721 catggtacgc gcccgccagg aactcggcgt cacgggagtc gtggtgacgc acgacatgcg
      781 gagcgcctat accgtgggcg accggatcgc gatgctctac cagggaaaga tccggcaggt
      841 cggcactatc gacgagatcc gccacaccga tgacccggtg gtgcggaact tcattgaggg
      901 gcggccggcc gacaccgacc ggctgctgac gacgggagcc agcgcatgaa gcggcgcaac
      961 gagtttctgg tgggactggt gctgctgctg agcctcgcgg tcgtggtggc cggcgcgctc
     1021 tggctctccg aggccaacgt cggccgccgg gagtcggatc acgtggcccg cttccgcacc
     1081 gtgggcggcc tcacgcccgg ggcgccggtc acctaccgcg gggtacgggt cggacgggtg
     1141 caggccatcc ggctggccga tgaattcgtc gaggccgacc tccgggtgtt ccagggtgtg
     1201 gagctgcccg cccgcccggc cgtgatcgcc gcctcgcaga gccttttcgg cgagtggagc
     1261 gccaccatcg tctcgcggga ccagccccag gacgatccca acgtccgcga gatgctggcc
     1321 gagacctccc gtcccggcgg cgaccgctgg cccggcgcca ccctgcccga cgtcggccag
     1381 ctcaccgccc aggccggccg catcgcgacc gacatcgcct cggtggccaa ccgggtgcag
     1441 gaagccttcg actcgagcgc ggtgatcgag ctccgccgca gcatcaagga cttcggcgag
     1501 atcgccgacc gcctggtgaa gttcaccaac agccagaccg gccggctcaa cgaagtcacc
     1561 ggaaacgtgg agcggacatc cgatgcggtg ctgagcgcgt cgcaggatct ccgcagcacg
     1621 ctctcgcggg tggattccgc gaccaacaac gggcagctcc agcagatcat cgagaacacc
     1681 cgggccggct ccggcgacct gcgccaggcc tcggctgacc tcaaggggat catctcgacg
     1741 gtgaaggggc aggacaccag catcgtccgg attctcgtcg ccgccgattc cgcgctgacg
     1801 cggctccagc agggacaggg aacgctgggc ctcctctcca aggacccggc gctctacaac
     1861 gagacgatcg agaccatgca ggagctgcgg cgcctgatcg cggacatcca gatgaatccg
     1921 cggaagtact tcaagttctc tgtgttctag ggatgctggc cgctagccgt tagccattag
     1981 ccattaggta tccgggtgtg agcgctgcgg ttggttgctg ctgtaggcgg aacaagggga
     2041 acatcggatc agctaacggc taacggctaa cggccgatgg ccaatggcgg ttgccaccac
     2101 ggtgctcatg agcaagaaga aatccaaggc cgagcgcgaa gtctccgctg gtggcatcgt
     2161 cttccgccgc caggccgacc ggagcgcccg cttcctgctg atccgggatc cctacgagca
     2221 ctggggcttt cccaaggggc acctcgaggg tgaggagacc ccggccgccg cggcgttgcg
     2281 cgagtcggcc gaggagaccg ggctggtgga tctccagctc cacgggccga tccgcatcat
     2341 cgactggcac ttccgcttcc gcggccgcta catccacaag ttctgccact tcttcctgtt
     2401 cgagagcccg gcggccgagg tgattcccca gctcgacgag gggatcaccg acttccgctg
     2461 gctgaccctg gaggaagcgc tcgacctgct gtcgtatgac aacgcccgcg gcgtgctcaa
     2521 gcgggccggc gaaatggccc gtactctggt ggcgatgggg gcgggccgtc cccgcaagca
     2581 tcccgctgcc cccgacccca agccccaggc ctcagcggtc gcggaggagt ccgatgttcc
     2641 gccaaccgcg ccggccctca cggagactcc ggagcgctag catgcccgtc gtggctgcca
     2701 tcgtcggtgc tggcgaggcg gcgcaggcgc tccgccggag tctcccgcca ggcggcccct
     2761 ggaacctggt gacctgccgc gatgccgccg ccctgcatcg caccctcgag tcccgcctgg
     2821 tcgacgccgt cgtcttcaat cccaccctgc ttccgcccca cgggctcgag acactcgccg
     2881 cccgttttcc cggaattccg cgcgtggtcc tcgctccctt caagcccgat gacgggcagc
     2941 tgctgctcga ctgccgtgcc gtcggcatcg cgcaggtgct ggtgctgggt gtcgacaacg
     3001 cggtggcggg tgagctggtc atccgggtgt cggccgcggc ggagcggcgg cgggcgctgg
     3061 ccgaggcggt ccgggtgctc cgcctcaagg agccgctcca gcgcgatgtc tggtcggatc
     3121 tgctggaccg ggtggatcgt ccgattcgaa ccgccgagct ggcgaagcgc gcagggtgca
     3181 cccgggagca cctgagccgg gagttcgccg cgggaggagc gcccaacctc aagcgggtga
     3241 tcgacctgac ccgggtcgcc tgcgccgcgg cgatgctccg caatcccggc tacgaggtgg
     3301 ccaccgtcgc ctcgattctc cgcttcgcca ccccgagcca cctcaacgcc accgcccgcc
     3361 ggatcgcggg ggtctcgagc cggggattgg ccggtctggg gcccaaggga gtgctggcga
     3421 acttcgcacg ggggaagacg aggagtcggg tctagttgga cgccggaggc cggaggcagg
     3481 aggccggcgg aggcggagtt tcaactccgg ccgccagcct tgtttcgctc cggcctccgc
     3541 ctgcctccgg cccccagcct ccttgccccc tcactgctct ttcactagat acagccccgt
     3601 tgcttcaacc cccactttgt gatacttttc acaagctaag gctggacctg taacaaccca
     3661 ccaaacgcga gaattatggc gaccgaatcc gttctgcgtc cgggcgagct caaggacgtc
     3721 ctgctccgag aaatcgagaa ggccgatctg gcctcggtgg acgtcaacga agtcggcact
     3781 gtgctcgagg tgcgtgacgg cgtcgcccgc atctacggcc tgaacaaggc cctcgccggc
     3841 gagatgctgg agttcaccgc cgccgagacc ggtgacgtgg tcaccggtat ggcgctcaac
     3901 ctggaagagg acaacgtcgg ggccgtggtc ctgggcgact acctcaagct caaggaaggc
     3961 gacgaggtcc gctgcaccgg ccgcctgctc gaggtgccgg tgggtccggg catgctgggc
     4021 cgggtggtga acgcgctggg tcagccggtc gacggccgcg gcccgatcgc ggcgtccggc
     4081 gcccgggcgg tcgagatggt ggcgccgggc atcatcgtgc gccagcccgt aaaggagccg
     4141 ctccagaccg gcatcaaggc gatcgacgcc atgatcccga tcggccgcgg ccagcgcgag
     4201 ctgatcatcg gcgaccgcgg caccggcaag actgccatcg cggtggacac gatcatcaac
     4261 cagaagggca ccggcgtcat ctgcgtctac gtcgcgatcg ggcagaagcg ctcgaccgtg
     4321 gccaccgtgg tggagaagct caaggaacgc ggcgcgatgg aatacaccat cgtggtcgtg
     4381 gccagcgcgt ccgacccggc cccgctgcag tacatcgcgc cgtactccgg ctgcgccatc
     4441 gccgaatact tcatgtacga ggaggggaag ccgacgctct gcgtctacga tgacctctcc
     4501 aagcaggcgg ccgcctaccg ccagctgtcc ctgattctcc gccggcctcc gggccgcgag
     4561 gcgtatccgg gcgacgtgtt ctatctccac agccgcctgc tcgagcgcgc cgccaagatc
     4621 tccgagaacc ccgacgtggt gaagctcgac agccgcatca agaagccggg cggctcgctc
     4681 accgcgctcc cgatcatcga gacccaggcc ggtgacgtct cggcctacat cccgaccaac
     4741 gtcatctcga tcaccgacgg gcagatcttc ctgaccaccg atctgttcta ctccaacgtc
     4801 cgccccgcgg tggacgccgg catcagcgtg agccgggtgg gtggtaacgc ccagatcaag
     4861 gcgatgaagc aggtggccgg tccgctccgc ctggcgctgg cccagtaccg cgagctcgag
     4921 gcgttcgccc agttcggttc ggaactcgac gccgccaccc agcggcagct ggcccgcggc
     4981 gcccgcacgg tcgaagtgct gaagcagccc cagtactccc cggttccagt cgagcgccag
     5041 gtcgcgatca tctatgccgt gaccaacggc tatctcgacg acatcgaagt caagaacatc
     5101 cggaagtggg aagccgattt cctgagctac ctctcggcct cgcagccggc ggtgctcgac
     5161 gggatccgca ccaagaaggc gctggatgac gatctgacgg gcaagctcaa ggccgcgatc
     5221 gccgccttca agccgatgtt ccgggccgag tagcatgccg gcctccaaca aggcgctgcg
     5281 cggacggatg cgctccgtcc agaacacccg caagatcacc cggacgatgg agctggtctc
     5341 cacgtccaag ctcaagcggg cgcaggaccg ggtggtgtcg gcccggccct atgccgcggc
     5401 gctggccgag gtgatcggcg acctggtcac ccccgatctg gccgagcggt ttccgctgct
     5461 ccgccgcccg gcgcctcccg gcaagggtgg cccctcccgg gcggcgctcc tcctgatcac
     5521 gtccaatcgc gggctggcgg gcggcttcaa cgccaacctg atcaaggaag cgcgcaagcg
     5581 gatcgagcag ctggagagcc agggctacac cgtggatctc cacctggtcg gccggaaggg
     5641 catcggcttc ttcaagtacc tcggccgggc cgcggcgagc cagcggatcg atatcggcga
     5701 caagcccacc gccgcccacg cggccgagct ggtggcgggg ttgatcgacg agtatgccaa
     5761 cgggcggctg gcgagcctgg aagtggtata cgccaagttc gtgagcccga tctccacccc
     5821 gcccaccacc ctccgggtgc tgccggtcga gccccctgcg aagaagaagg gcgggctcca
     5881 ggccgactac atcctcaagc ccagcgccga ccagatcctg gagcagctgc tgccgctcta
     5941 tgtgcgcaac caggtctatc gggggttggt ggagacggct gcggcggaac atggcgcccg
     6001 tcggaccgcg atgaagaacg cgaccgacaa cgcgggcgag atctacgaga ttctgaagcg
     6061 gacgtacaat cgccagcgcc aggcggcgat cacgcaggaa atcgcggaga tcgtgggtgg
     6121 cgcggcggca ctggaaggct agcggtcagg ggtcaggggt cgggggaaac gccaaggcgc
     6181 ccctgacccc cgaccccgga ccatcgaaca cctcagagag cgagatcaac tgagaatggc
     6241 aacggcgact gcggcaacca acatcggcag ggtagttcag gtcatcggcc ccgtactcga
     6301 cgtcgagttc gagccggaga acctgcccga gatctacaac gcgctggtgc tggaagactc
     6361 gaccggcgcc ctgccgatcc ggctcaccgc cgaggtgcag cagcacatcg gccagaacca
     6421 ggtccgggcg gtggcgatgt cctccaccga cggcgtggtc cggggcatga aggtggtcga
     6481 caccggggcc gcgatctcgg tgccggtcgg ttcggccccg ctggggcgga tcctcaacgt
     6541 gctgggcgag ccggtggacg gcggggcgcc gatccccgcc tccaacgagc ggtggcccat
     6601 ccaccgtgag acgcccaagt tcgtcgacct cgagcccaag acccagatct tcgagaccgg
     6661 catcaaggtc atcgacctga tcgccccgtt cgtgaagggc ggcaagatcg gcctcttcgg
     6721 cggcgccggc gtgggcaaga ccgtcgtcat catggagctg atcaacaacg tggccaaggg
     6781 ccacggcggc aagtcggtgt tctgcggggt gggcgagcgg acccgcgagg gcaacgacct
     6841 ctacctcgaa atggaagaaa gcggcgtcat caagagctgc gccctgatct acggccagat
     6901 gaacgagccg ccgggcgcgc gtctccgggt gggtctctcc gggctgaccg tggcggagta
     6961 cttccgcgac atggaaggcc aggacgtgct gctgttcatc gacaacatct tccgcttcac
     7021 ccaggcgggc tccgaggtgt cggcgctgct cggccggatg ccgagcgcgg tgggctacca
     7081 gccgaccctc gccaccgaaa tgggcgatct ccaggagcgg atcacgtcga ccaagaaggg
     7141 ctcgatcacc tcggtgcagg cgatctacgt gccggccgac gacctgaccg acccggcccc
     7201 ggccacggcc ttcgcccacc tcgacgcgac ggtggtgctc tcccgcgcga tctccgagct
     7261 gggcatctac cccgcggtgg acccgctcga cagctccagc cggatcctcg acgcgcagta
     7321 cctgggcgac cggcactaca acgtcgccat cggggtccag cgcaccctgc agaagtacaa
     7381 gagcctccag gatatcatcg cgatcctggg catggacgag ctctccgagg acgacaagct
     7441 gatcgtggcc cgggcgcggc ggatccagcg cttcctgtcg cagccgttct tcgtggccca
     7501 gcagttcacc ggcttcgagg gcaagtacgt gaagctggcc gacaccatcg agagcttcga
     7561 gcgggtgctc gcgggtgagt tcgacgatct gccggagcag gcgttctaca tggtcggcgg
     7621 catcgacgaa gcggtcgaga aggccaagaa gctggcgagt tcgtgatgcg ggtcacggtg
     7681 atctcccccg aagccgccat cttcgacggc gaggccgact cggtaattgc gccggccttc
     7741 gacgggcagg taggtatcct gccgcgtcac gccccgttca tgacgctgct cggccgcggg
     7801 cccctcgagg taaaggccgg cgccgagacg caccgctttg ccgtggacgg cggcttcctg
     7861 caggcggtca acaatacggt ccgcatcgtg gccgaacagg tgaaaggagc agggaatgcg
     7921 tcgtaagctc tggctcgcga ttctggtact cgcccttggc ggcaccggtg tcgcttcggc
     7981 tcagacgctc gggactccga tcttcaaggg cccctaccgg gccttcaagt cgaatgagct
     8041 cggtggctac atctccgatc cgggcgacgg catcagcttc gccctcgaag gggaataccg
     8101 ccgggccgat cgccggggcc gcttcgactg gggccttcgg ttcggctata tggatcccca
     8161 gggcaacggt gacggcatct tcgcgatcgg cgccgatgtc cgcgccccgg tggcgcgtca
     8221 cacccaggat ttcccgctcg atgcctcggt gaccgccggg ttcggcgcgc tgttcagcaa
     8281 cggcaacagc ggcttcctgg tcccgctcgg catcaccctg gggcggcagg tgctgctcga
     8341 gggatcgaac atctccttcg tgccgtgggt gcatccggtg atcgcgccgt ccttcggcga
     8401 cctgtacgac ggggcgcagt tcgggctggg cctcggggtc gacatcaacc tttcccgcac
     8461 ctgggatgcc cgcctgagcg gtgcgctggg tgacctcgac ggcttcgggg tcgggctggc
     8521 gtggcatcga tagagggccg ttagccatta gccgttagcc attaggtgtt cggtaacaaa
     8581 caaccctcct cgggccagga tcgaggaggg ttgtttcaca tcggaagagc taatggctaa
     8641 gggctaacgg ctaagggcca gcaattgact tatcccttgt cctgacacta gcttgcggcg
     8701 ccttttcacc ctgccgtaga gactttggag gaatcatgaa ggtgcgtgtc ttcccgggag
     8761 tgttcgccgt cgccggcctc gtgcttggag cgggcgtcat gcaggcccag ggcgtgaccg
     8821 gcctgccggt gcgcaacagt ggtctggtca gcggcctcac gattggcggg gaagtgggct
     8881 tccccaacgc ggactacggc aaggggacgg cgttcggcgc ccgcggggcg ctgggacttg
     8941 gccccttcgg tgtgagcgcg gtcatctccc gctggaatcc tgatggcccc gccgatgccc
     9001 agaccggcgt cggcggctac ctcaactaca aggtcttcgg cggcccgctg gtccccttct
     9061 cggtgaccct ccagggcggt gccgaataca ccagcaacgg cggcatcaag cagctccatg
     9121 ctccgatcgg cctcgggata gggctccgga ttcccaatcc ggcgctcgcc atcaagccct
     9181 ggatcgcgcc gagactggat atcgcccggg tgtccggcac cggcatcaag agcgataccg
     9241 agaccaattt cggcatcagc ggcggcatcg acctgagcct gctcggcggg ctgagcttcg
     9301 gtgcggccta cgaccggacc ttcgtcggca atggcgtcaa cccgagcgtg ttcagcgccg
     9361 gggcgagcta cacgatcaag attccggggc tgtaacggca ggcaggaggc cgg
//
LOCUS       DATIFF010001058         3750 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_441467, whole genome shotgun sequence.
ACCESSION   DATIFF010001058 DATIFF010000000
VERSION     DATIFF010001058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3750
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_441467"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..828
                     /locus_tag="VLD58_15475"
     CDS             <1..828
                     /locus_tag="VLD58_15475"
                     /inference="COORDINATES: protein motif:HMM:TIGR03718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC/Alx family metal homeostasis membrane
                     protein"
                     /protein_id="HSB55761.1"
                     /translation="YEAHWFGLGLNVPQLDGSIAPMVSGLEAAKLFLTGYLVEKSLSL
                     DNVFVISLIFGSLAVPAIYQHRVLFWGILGALVMRGVMVAVGAQLIHQYAWVPMAFGA
                     ILVLTAVKMAFMGTAPVDPATHPVLRLIRRVVPVTPDYEGPRFLSRLGGRRAVTPLFL
                     ALVLVEITDLVFALDSIPAIFAITADPFLVLTSNVFAILGLRALYFCLAGSMDRFRYL
                     KPALIAILAFVGIKMLLVQTSFKVDPTISLLVIAGILTIAIAASAVESRRGGKAATA"
     gene            926..1633
                     /locus_tag="VLD58_15480"
     CDS             926..1633
                     /locus_tag="VLD58_15480"
                     /inference="COORDINATES: protein motif:HMM:NF012696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HSB55762.1"
                     /translation="MTAASKTLTTRREVLRRISQTAAALALSPTLLSAGQLPSPALRY
                     RDGDEPATPEAALEALREGNRRFAAGKGSGPHRDLARVKAVAAKQTPFAAVLTCADSR
                     LPVEILFDQGFGDVFVCRNAGNVVTSEEIASLEFGTLVLGAKVLLVLGHSACGAVKAS
                     LAGEPVPGQISALYQHIRPAITGAGSDVEKAVAANVQYQTKLLESSPVLTQLVKERKL
                     LIAGAVYDLATGRVREL"
     gene            1660..1980
                     /locus_tag="VLD58_15485"
     CDS             1660..1980
                     /locus_tag="VLD58_15485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55763.1"
                     /translation="MSPERMDLVTIIAEHVLRDLLIADLRRLGARGYTLGEVEGEGTR
                     GTHAADWQGKHVRIEVITTAEVADRILSHVAETYFADYSLITWRSEVQVLRGAKFRGG
                     EGTR"
     gene            1977..2951
                     /locus_tag="VLD58_15490"
     CDS             1977..2951
                     /locus_tag="VLD58_15490"
                     /inference="COORDINATES: protein motif:HMM:NF017765.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent bicarbonate transport family
                     permease"
                     /protein_id="HSB55764.1"
                     /translation="MNILAQNLLSPIALAFALGVVAKLVRSEFSLPKDIYAGLGAYLL
                     FALGIKGGVELGHASFATIIAPVGVTLLLGCVTPVTTYLTARHLARLGAADAAALAAH
                     YGSVSAVTFIAAQTFVTQMGAAPEGFMPTLLTLLESPGIHIALAIGALQTAGQHQSTK
                     EVLHEVLTGRTMILLVGGLLIGVAMGEANWKSVEGFFDTKGPVFRGALCLFLLEMGIV
                     AGSRIGDLKTVGVRLLAFGILVPIAHGLLGVGLGHLAELSAGGAAVLGAMAASASYIA
                     APPAVRVTLPSANPTYYLTCALAITFPFNILAGIPIYYEAARWLAERG"
     gene            complement(2961..>3750)
                     /locus_tag="VLD58_15495"
     CDS             complement(2961..>3750)
                     /locus_tag="VLD58_15495"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HSB55765.1"
                     /translation="AIEGEELYLAYQPIFSLKSGRLEGIEALVRWEHPQFGHLLPQHF
                     VPLAEETGLIVRMGRWVLREACRQVQAWRTAFPETPLTMSVNISGRQLAELDLVAETR
                     MALAETDVAPGALVLEITESVLMQQTGSVLEQLRALKALGVKLAIDDFGTGYSSLSYL
                     QRFPIDLIKIARPFVEDVTAGVDKSALARAIIGLGDTLRLRTVAEGIETPEQCAALRL
                     LGCSMGQGYYFAPPLPPAEIARLLAQPRCELPAPAAGGSFSDAA"
BASE COUNT          560 a         1273 c         1326 g          591 t
ORIGIN      
        1 tatgaggccc actggttcgg cctcggcctc aacgtcccgc agctcgacgg ctccatcgcc
       61 ccgatggtct cagggctgga ggcggcgaag ctcttcctca ccggctacct ggtggagaag
      121 tcgctcagcc tcgacaacgt cttcgtcatc tccctgatct tcggctcgct ggcggtgccg
      181 gcgatctacc agcaccgggt gctcttctgg ggcatcctgg gagcgctggt gatgcggggc
      241 gtcatggtcg ccgtgggggc acagctgatc caccagtacg cctgggtgcc gatggccttc
      301 ggcgcgatcc tggtgctcac cgcggtgaag atggcgttca tggggaccgc cccagtggac
      361 ccggccacgc acccggtcct gcggctgatc cgccgggtgg tgccggtgac ccccgactac
      421 gaggggccgc ggttcctgtc gcggctgggc gggcggcggg cggtgacgcc gctgttcctg
      481 gccctggtgc tggtggagat caccgacctg gtgttcgcgc tcgactcgat cccggcgatc
      541 ttcgcgatca ccgcggaccc gttcctggtg ctgacctcga acgtgttcgc gatcctcggc
      601 ctccgggcgc tgtacttctg cctggccggc tcgatggacc gattccggta cctcaagccg
      661 gccctgatcg cgatcctggc gttcgtgggg atcaagatgc tgctggtgca gacgtcgttc
      721 aaagtcgatc cgacgatctc actcctggtg attgccggga tcctgacgat cgcgatcgcc
      781 gcctccgcgg tggagtcccg gcggggcggg aaggcggcga cggcgtgacg ccacgtccgc
      841 cggcgccgcg atggggaccg accaggcctg gctcattcac ccagcccgct ccgtggagcg
      901 ggcttttctt cgaccgaggc atccgatgac cgctgcttcc aagaccctca ccacccgccg
      961 cgaggtgctg cggcgcatca gccagaccgc ggccgccctg gccctgtccc ccaccctgct
     1021 cagcgcgggc cagctgccgt ccccggccct ccggtatcgc gacggcgacg agccggccac
     1081 ccccgaggcg gcgctggagg cgctacgcga aggcaaccgc cgcttcgccg cgggcaaggg
     1141 cagcggcccg caccgcgacc tcgcccgggt caaggcggtg gcggcgaagc agaccccctt
     1201 cgcggcggtg ctgacctgcg ccgacagccg gctcccggtg gaaatcctct tcgaccaggg
     1261 cttcggcgac gtcttcgtct gccggaacgc cggcaacgtg gtcacttccg aggagatcgc
     1321 aagcctcgag ttcggcaccc tggtactggg cgcgaaggtg ctcctggtgc taggccactc
     1381 cgcctgcggc gcggtgaagg cctcgctggc cggtgaaccg gtgccaggcc agatcagcgc
     1441 gctctatcag cacatccggc cggccatcac cggggcgggg tcggatgtcg agaaggcggt
     1501 cgccgccaac gtgcagtacc agaccaagct gctggagagt tccccggtgc tcacccagct
     1561 ggtcaaggaa aggaagctgc tgatcgcggg cgccgtctac gacctcgcca ccggaagggt
     1621 gcgcgagctg taaccccaac ccgtgtggag aggagcgcca tgtcacccga acggatggac
     1681 ctggtcacga tcatcgcgga gcacgtgctg cgcgacctcc tgattgccga tctgcggcgg
     1741 ctgggagcgc gaggctacac cctgggcgaa gtggaagggg aaggcacccg cggcacccac
     1801 gccgccgact ggcagggaaa gcacgtccgc atcgaggtga tcaccacggc cgaggtggcc
     1861 gaccgcatcc tctcccacgt ggcggagacc tacttcgccg actattcgct gatcacctgg
     1921 cggagcgagg tgcaggtgtt gcgcggggcc aagttccggg gcggggaggg aacgcgatga
     1981 atatcctcgc gcagaacctg ctctcgccca tcgcgctggc cttcgcgctc ggcgtggtgg
     2041 ccaagctggt ccggagcgag ttcagccttc ccaaggacat ctacgccggg ctcggcgcgt
     2101 acctgctctt tgccctcggc atcaagggcg gtgtggaact ggggcacgcg agcttcgcga
     2161 cgatcatcgc cccggtgggc gtgaccctgc tgctcgggtg tgtcaccccg gtcaccacct
     2221 acctcacggc ccgccacctg gcgcggctgg gcgcagccga cgcggcggcg ctggcggcgc
     2281 actacggctc ggtatcggcg gtgacgttca tcgccgctca gaccttcgtc acccagatgg
     2341 gcgcggcgcc cgagggcttc atgcccacgc tgctcaccct gctcgagagc cccggtatcc
     2401 acatcgcgct cgcgatcggc gcgctccaga cggcgggaca gcaccagtcg acgaaggagg
     2461 tgctgcacga ggtgctcacc ggccggacga tgatcctcct ggtgggcggt ctcctgatcg
     2521 gcgtggcgat gggcgaggcc aactggaagt ctgtcgaggg gttcttcgac accaagggac
     2581 cggtcttccg gggcgcgctc tgcctcttcc tgctggaaat gggaatcgtg gcggggagca
     2641 ggatcggcga cctgaagacc gtgggcgtca ggctgctggc cttcggcatc ctggtgccga
     2701 tcgcgcatgg cctgctgggc gtgggactgg ggcacctcgc agaactgtcg gcgggagggg
     2761 cggcggtgct cggggcgatg gcagcgagcg cctcctacat cgcggcgcca ccggcggtgc
     2821 gggtgacgct gccgagcgcc aaccccacct actacctgac ttgtgcgctc gcgatcacgt
     2881 tccccttcaa catcctggct ggaatcccga tctactacga agcggcgcgt tggctggccg
     2941 aacggggata agcgagcgga tcaggccgca tcggagaacg acccgcccgc ggccggagcg
     3001 gggagctcgc agcggggctg ggccaggagc cgggcgatct cggccggcgg gagcggtggg
     3061 gcgaagtagt acccctgccc catgctgcac ccgaggaggc ggagggcggc acactgctcg
     3121 ggcgtctcga tcccttcggc cacggtgcgg agccgcaggg tatcgcccag gccgatgatg
     3181 gcgcgggcca gggccgattt atcgacgccg gcggtgacgt cctcgacgaa ggggcgcgcg
     3241 atcttgatga gatcgatcgg gaagcgctgg agatagctga gcgacgaata gccggtgccg
     3301 aagtcgtcga tagcgagctt cacgccgagg gccttgaggg cgcgcagctg ctccagcacc
     3361 gagccggtct gctgcatcag cacgctctcg gtgatctcga ggaccaacgc gccgggggcc
     3421 acatcggtct cggccagcgc catgcgggtc tcggcaacca ggtcgagctc ggcgagctgg
     3481 cggcccgaga tattgaccga catggtgagc ggcgtctcgg gaaaagcggt gcgccacgcc
     3541 tggacctggc ggcaggcctc gcggagcacc cagcgcccca tgcggacgat gaggccggtc
     3601 tcttcggcga gcgggacgaa gtgctgcggc agcaggtggc cgaactgggg atgctcccag
     3661 cggaccaggg cctcgatccc ctccagtcgc ccggacttaa gcgagaagat cggctgatac
     3721 gccaggtaca gctcctcgcc ctcgatggcc
//
LOCUS       DATIFF010001059         3830 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1672780, whole genome shotgun sequence.
ACCESSION   DATIFF010001059 DATIFF010000000
VERSION     DATIFF010001059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3830)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3830)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3830
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1672780"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..191
                     /locus_tag="VLD58_15500"
     CDS             <1..191
                     /locus_tag="VLD58_15500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55766.1"
                     /translation="RHEEALRWLRKAVRHGFINYPFLAEHDPFLGDLRAEPGFRQILS
                     EVKPRWESAVEWERRRQP"
     gene            188..2806
                     /locus_tag="VLD58_15505"
     CDS             188..2806
                     /locus_tag="VLD58_15505"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB55767.1"
                     /translation="MTDIPARLAAALADRYRLDRELGQGGMATVYLAQDLKHDRRVAI
                     KVLRPELAAVLGAERFVQEIKTTAGLSHPHILPLFDSGEADGFLYYVMPYIQGETIRE
                     KLNRETQFGIEEAVKITTEVADALAYAHTQGVIHRDIKPENVLLHNGRPMVMDFGIAL
                     AVSAAAGGRMTETGLSLGTPHYMSPEQATADKQITARSDVYSLASVLYEMLAGEPPHT
                     GSSAQAIIMKIVAEPVQAVTKLRKSVPFNVAAALAKALEKISADRFESARAFAEALQN
                     PGFTTAGRPAETGVGRGRLPALPVVGGMAVGAVVLAALGWLAGRRGAGAGPVEYDVGL
                     PETAAMWTGYTGPGFALAPSGDFVVYQAAPNGRSELWYRSLRDATVRRIPGTEDGGEP
                     TLSPDGRRIAFLKTDADVRSVVVLPVEGGTATTLGRATVLPSLQWLPDGRIQLIDNSG
                     NRVRWFDSEGGPAKAANITFCIVGRPIPSEHALLCGSAIWTYAYLSKVDGSLGMRRLW
                     QVSPDTAPVVGSDFQLVDGRYLVYVSVAGDLLAAPVQLKTGRVGRAVRMEARLARHEA
                     SGTGAYAISASGTLVYAQGDDRSIGNLVHISAAGVDTLSVGREAFLTYEYSPDGRRLA
                     ALVEVVDGMELRIYDLASGRYQTWFRRPAMTHAIWSPQGDRLLFGVGDSIFVGSPDRS
                     DPPEFLLQIPRFEAMRWMPGDRVYGSRPEPNAALVLRLDRRPVTADSLFSDTGFLFPS
                     ADERWIAYANQAYTEAWIEPLPRDGRRFLAASGNLEDIEWLSPLELGVPITDGGRTRI
                     ERVTVDAGANPPVRNRGRWADAPEFRDTNGPSFATAPGGGLIYMQGAVDRPVPYLRVV
                     PRWVDRMKRAVDEANR"
     gene            2803..>3830
                     /locus_tag="VLD58_15510"
     CDS             2803..>3830
                     /locus_tag="VLD58_15510"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB55768.1"
                     /translation="MTVAFSRLAAALADRYRLERELGQGGMATVYLAQDLKHHRQVAI
                     KVLKPDLAAVLGADRFVQEITTTAQLQHPHILPLFDSGTADGFLYYVMPYIQGETLRT
                     KLDREHQLGIEEAVKISTEVADALDYAHRHGVIHRDIKPENILLHDGRPMVADFGIAL
                     AVSAAAGGRMTETGLSLGTPHYMSPEQATADKQITARSDVYSLGSVLYEMLTGDPPHT
                     GSSAQQIIMKIVTEEAAPVTRLRKSVPPNVAAALAQALEKLPADRFESAKAFADALTN
                     PGYRAAWATAAVPTLRGGRSRTRGFGRDVLWMALGVLVTLVGPWVWPSGAAEGRESRT
                     QITYTGRAR"
BASE COUNT          610 a         1295 c         1331 g          594 t
ORIGIN      
        1 gccggcacga ggaggcgctc cgctggctgc gcaaggccgt gcggcacggc ttcatcaact
       61 atccgttcct ggccgagcac gatcccttcc tgggcgacct gcgggccgaa ccgggattcc
      121 ggcagatcct gtcggaggtg aagccgcgct gggagtcggc cgtcgaatgg gagcggaggc
      181 ggcagccatg acggacatcc ccgcgcgtct cgccgccgcc ctcgccgacc gctaccgcct
      241 cgaccgggag ctggggcagg gcggcatggc caccgtctac ctcgcccagg acctcaagca
      301 cgatcgtaga gttgccatca aggtcctgcg gccggaactc gccgccgtcc tgggagccga
      361 acggtttgtc caggagatca agaccacggc ggggctctcc catccgcaca tcctcccgct
      421 gttcgattca ggagaagccg acggcttcct ctattacgtc atgccctaca tccagggtga
      481 gacgatccgg gagaagctga atcgcgagac gcagttcggg atcgaggagg cggtgaagat
      541 caccaccgag gtggcggacg cgctggccta cgcgcacacc cagggcgtga ttcaccgcga
      601 catcaagccg gagaacgtcc tgctgcacaa tgggcggccg atggtgatgg acttcggtat
      661 cgcgctcgcg gtgagtgccg ccgccggcgg gcggatgacc gaaaccgggt tgtcgttagg
      721 cacgccgcac tacatgagcc ccgagcaggc gacggcggac aaacagatca cggcgcgctc
      781 ggacgtctat tccctggcca gtgtgctcta cgagatgctg gcgggggagc cgccccacac
      841 cggcagctcg gcgcaagcga tcatcatgaa gatcgtggcc gagcccgtcc aggcggtgac
      901 caaactcagg aagtcggtgc cgttcaacgt ggcggccgcg ctggccaagg cgttggagaa
      961 gatttcggcc gaccggttcg agagcgcgag ggccttcgcc gaggccctcc agaacccggg
     1021 cttcacgacg gctggtcgcc cggcggagac gggggtagga cgcggccggc tccccgcact
     1081 cccggtagtc ggcgggatgg cggtgggggc ggtcgtgctg gcggcgctgg ggtggctggc
     1141 cggacgacgg ggtgccggcg ccggcccggt ggagtacgac gtcggattgc ccgagacggc
     1201 ggcgatgtgg accggttaca ccgggccggg cttcgcgttg gctccgtcgg gcgacttcgt
     1261 cgtctaccag gcggcaccga acgggcggag cgagctctgg taccggtcgc tgcgggacgc
     1321 cacagtccgg cggattcccg gcacggagga cggcggtgag ccgaccctct cacccgacgg
     1381 caggcggatc gcgttcctca agaccgacgc cgacgtccgg agtgtcgttg tcctgccggt
     1441 cgagggaggg acagccacca cactgggtcg cgccacggtc ctaccgagtc tccaatggct
     1501 tcccgacgga cggattcaac tgatcgacaa ctccgggaac cgggtccggt ggttcgattc
     1561 tgaaggcggg cctgcaaagg cggcgaacat cacgttctgc attgtcggac gccccatccc
     1621 gagcgagcat gccttgctct gcggcagtgc gatctggacc tacgcctacc tctccaaggt
     1681 ggacggcagt ctcggcatgc gtcggctctg gcaggtctca cccgataccg cacccgtggt
     1741 cggctccgac ttccaactcg ttgacgggcg atacctggtc tacgtctccg tcgcgggcga
     1801 cctgctcgcg gccccggtcc agctgaagac gggacgggtc ggccgcgccg tccggatgga
     1861 ggccagactc gcgcgacacg aggcgagcgg caccggggcc tacgccatca gcgcctccgg
     1921 gacgctggtg tacgcccagg gagacgatcg gagcattggc aacctggttc acatcagcgc
     1981 ggccggagtc gacacgctgt cggttggcag agaggccttc ctcacctacg agtacagccc
     2041 cgacgggcgt cgcctcgccg cgttggtgga ggtggtcgac ggcatggaac tcaggatcta
     2101 cgatctggcg tccggccgat accagacctg gtttcggcgg cccgccatga cgcacgccat
     2161 ctggagcccc cagggtgacc ggctgttgtt cggcgtcggc gattcgatct tcgtgggctc
     2221 acccgaccgc tccgacccgc cggaattcct cctgcagatt ccccgcttcg aggcgatgcg
     2281 gtggatgcct ggcgaccggg tctacgggag ccgtcctgag ccgaacgccg cactcgtgct
     2341 gcgactcgac cgccggccgg tcaccgccga ttcgctcttt tcggacaccg gattcctttt
     2401 tccgtcggcc gacgagcggt ggatcgcgta cgccaatcag gcctacaccg aggcctggat
     2461 cgaacccctc ccccgcgacg gccgccgctt cctcgcggct tccggcaatc tggaagacat
     2521 cgagtggctg tcgccgctcg aattgggtgt gccgatcacg gacggcggtc ggacccggat
     2581 cgagcgggtg accgtcgacg ccggggccaa tccgccggtc cggaaccggg gccggtgggc
     2641 cgacgcgccg gagtttcgag acaccaacgg cccttcgttc gcgacggcgc cgggtggggg
     2701 tctcatctat atgcagggcg ccgtcgacag gccggtcccg tatcttcgcg tcgtgccgcg
     2761 ctgggtggac cggatgaagc gcgcggtcga cgaggccaat cgatgacggt tgctttctcc
     2821 cgcctcgccg cggctctggc cgaccgctac cgcctcgagc gcgagctggg ccagggtggg
     2881 atggccaccg tctatctcgc ccaggatctg aagcatcacc gccaggtggc gatcaaggtc
     2941 ttgaagccgg atctggcggc cgtgctcggc gccgaccgct tcgtgcagga gatcaccacc
     3001 acggcccagc tccagcatcc acacatcctc ccgctcttcg attcgggaac ggctgacggc
     3061 ttcctctatt acgtcatgcc ctacatccag ggcgagacgc tccgcaccaa gctggaccgc
     3121 gagcaccagc tgggcatcga agaagccgtg aagatctcca ccgaggtagc cgacgccctg
     3181 gactacgccc accgccacgg cgtgatccac cgcgacatca agcccgagaa catcctgctg
     3241 cacgacggcc ggccgatggt ggccgacttc gggatcgccc tggcggtgag cgcggcggcc
     3301 ggtggacgga tgaccgaaac ggggctctcg ctcgggacgc cgcactacat gagtccggag
     3361 caagccacgg cggacaagca gatcaccgcg cggtcggacg tctactcgct cgggagcgtg
     3421 ctgtacgaga tgctgaccgg ggacccgccg cacaccggct cgtcggcgca gcagatcatc
     3481 atgaagatcg tgaccgagga ggcggcaccg gtcactcggc tccggaagag cgtgccgccc
     3541 aacgtggcgg cggcgctggc gcaggcgctg gagaagctgc cggccgaccg gttcgagagc
     3601 gcgaaggcct tcgcggacgc cctgaccaat cccgggtacc gcgccgcctg ggcgacggcc
     3661 gcggtgccga cgctgcgggg tggtcgatcg cgaacccgag ggttcggtcg ggacgtcctc
     3721 tggatggctc tgggggtgct cgtcaccctg gtgggtcctt gggtctggcc ctcgggagcg
     3781 gctgagggca gggagtctcg cacccagatt acctacaccg gtcgcgcccg
//
LOCUS       DATIFF010001060         1334 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_442420, whole genome shotgun sequence.
ACCESSION   DATIFF010001060 DATIFF010000000
VERSION     DATIFF010001060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1334
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442420"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(79..875)
                     /locus_tag="VLD58_15515"
     CDS             complement(join(79..537,540..875))
                     /locus_tag="VLD58_15515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558177.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HSB55769.1"
                     /translation="MGQDLVPDGLWKIVEPLIPPQRERPQGGGTRFVDDRAVFTAIVY
                     VLTTGCAWRHLPAEFGVSPATAHRRFVAWTEAGLWRRLHRAVLDRLGEQAAIDWSRAV
                     VDAASVRAKRGALTGPSPVDRGKRGSKLHVLTDRGGLPLAVAVSAANTPDSLALIPLV
                     QAVPAIRSRRGPRRRRPGKLHADKGYDYDHLRAWLRARRITPRIARRGVETSAKLGRH
                     RWVIERSLAWLTGYRRLTLRYERSARLFTSFLTLAATLTCYKKLTT"
     gene            complement(964..>1334)
                     /locus_tag="VLD58_15520"
     CDS             complement(964..>1334)
                     /locus_tag="VLD58_15520"
                     /inference="COORDINATES: protein motif:HMM:NF024751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSB55770.1"
                     /translation="AFFGSFTGATFVDFLKKLLADAPGPVFVVVDGHPAHRATVVKEY
                     VRSTDGRLQLYFLPGYSPELNPDEWVWKNIKADRVGRAGITSQHGFHSKIAAALHRLQ
                     KTPHLIRGFFTDPNLRYITA"
BASE COUNT          212 a          446 c          471 g          205 t
ORIGIN      
        1 gccgagggcc tggcccgtga caaggagaag ctcggtctcg ccgctttccc aatcgccggg
       61 gacgagtaag agcttgtctc acgtggtgag cttcttgtag caggtcagcg tggcggccag
      121 cgtaagaaat gaggtgaaca accgggccga gcgctcgtag cgcaaggtca gccggcgata
      181 gccggtcagc caggctaggg agcgctcgat cacccagcgg tgccggccga gcttcgcgct
      241 ggtctccacg ccgcggcggg cgatccgcgg ggtgatccgc cgggcgcgca gccaggcccg
      301 cagatggtcg tagtcgtagc ccttgtcggc gtgcagcttg cccggtcggc gccgccgcgg
      361 accccgccgg gaccgaatcg ccgggacagc ctgcaccagc gggatcagtg cgaggctgtc
      421 gggggtgttg gccgcgctga ccgccaccgc cagcggcagt ccgccccggt cggtgagcac
      481 gtgcagcttg gagccgcgct tgccgcggtc gaccgggctc gggccggtca gcgcgccccc
      541 cttttcgccc gcacgctggc cgcatccacc accgcgcggg accagtcgat cgccgcctgc
      601 tcaccgagcc gatccagcac cgcccggtgc agccgccgcc acagcccggc ctcggtccag
      661 gccacgaacc gccggtgcgc ggtcgccggg gagacgccga actcggccgg caggtgccgc
      721 caggcgcagc cggtggtcag cacgtagacg atcgcggtga acaccgcgcg gtcatcgacg
      781 aatcgagtac cgccaccctg tgggcgctcg cgctgtggcg ggatcaacgg ttcgacgatc
      841 ttccatagcc cgtccgggac caggtcttgg cccagtcgtt gttccacgac gggacaacgc
      901 cgcgcaggtc acggtccatc cacgtgagac aagctctaag gggtttgttg gtgggtggac
      961 tgttcaggcg gtgatgtaac gcaggttggg gtcagtgaag aagccgcgga tgaggtgggg
     1021 cgtcttctgc agccggtgca gcgcggccgc gattttggag tggaacccgt gctggctggt
     1081 gatgccagcc cggcccacgc gatctgcctt gatgttcttc cacacccatt cgtccgggtt
     1141 gagctcgggt gagtatccgg gaaggaagta cagctggagc cgcccgtcgg tggaccgcac
     1201 gtactctttc accacggtgg cgcgatgggc gggatggccg tccacgacga cgaacaccgg
     1261 ccccggcgca tccgccagca gcttcttcaa gaagtcgacg aacgtggcac cagtgaagct
     1321 tccaaaaaac gccg
//
LOCUS       DATIFF010001061         3201 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_597448, whole genome shotgun sequence.
ACCESSION   DATIFF010001061 DATIFF010000000
VERSION     DATIFF010001061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3201
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_597448"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..329)
                     /locus_tag="VLD58_15525"
     CDS             complement(<1..329)
                     /locus_tag="VLD58_15525"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HSB55771.1"
                     /translation="MQVIIPLAGKGTRLRPHTHLVPKPMLKVAGRPVMDWVMDTLAGL
                     DVSELIFITGHLKEQVEAYSRSRYGLPCRYIEQRVQDGTAGAVNLARPHVTGPVLIIF
                     VDTVFEA"
     gene            complement(332..682)
                     /locus_tag="VLD58_15530"
     CDS             complement(332..682)
                     /locus_tag="VLD58_15530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin"
                     /protein_id="HSB55772.1"
                     /translation="MAEAPYRVEKPWGYELIWALTDRYVGKILHVNAGHVLSCQYHNV
                     KDETMHVLSGELILRLGRDADLVERPFRAGETVRIRPGVIHQIEAVVDTDVLEASTPE
                     LDDLVRLSDRYGRS"
     gene            complement(682..1275)
                     /locus_tag="VLD58_15535"
     CDS             complement(682..1275)
                     /locus_tag="VLD58_15535"
                     /inference="COORDINATES: protein motif:HMM:NF024247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HSB55773.1"
                     /translation="MSDPLRDLIGTGGDRRDFFRQSFGQWAEKLLEKTEERIVQQKYF
                     RPPGALPEVAFLAACTRCGACEPVCPPHAIRPVPTSGGLAAGTPMLEPRMQPCTVCTD
                     MPCVRACPTGALTLPRDGWAGYRMGALTFLPERCVTYQGTACRVCADVCPVGEAALII
                     DDAGHPVIRREGCVGCGVCVRECITSPSSFTIELAEA"
     gene            complement(1279..2478)
                     /locus_tag="VLD58_15540"
     CDS             complement(1279..2478)
                     /locus_tag="VLD58_15540"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HSB55774.1"
                     /translation="MPTHRLALAALLLAAAPARAQTPAGFPAVWRTLADTFHATLARE
                     GIVGGAIWFLRGDSALAREFHGLADAGTGRKVDANTIFHWASITKTFTGVAIMQLRDR
                     GRLSLDDPIVKYVPELMAVHNPWGPMEAITIRQLMSHTAGFRNPTWPWGGDKPWHPFE
                     PTEWAQVVAMLPYTEILFPPGSKYSYSNPGIIFLGRVIEKLSGDDFEVYVDKNILKPL
                     GMTHSYFDLTPYHLLADRSNNYEVRDGKPVANGLDFDTGITTSNGGLNAPITDMAKYF
                     AFLLGRGPGATGPVPVLARKSLEEMWRPVMTAGGEEAPGDSVGLSFFVKHEGTLRLIG
                     HTGSQRGFRAFFYLHPESGTAVVAAFNTAAAEERAGNHPDQAAIRSGLLAALARNVWP
                     EFRAGRP"
     gene            2573..>3201
                     /locus_tag="VLD58_15545"
     CDS             2573..>3201
                     /locus_tag="VLD58_15545"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSB55775.1"
                     /translation="MTPFGRIIGALLLAPLGTNGVQGQSRPTPLTPGEGRVAVPGGQI
                     WYRVVGTGRGTPLVLVHGCCGAASYYLDPLADLGRDRPVVFYDQLGTGRSDLTTDTMV
                     WAPERRVGELHLLLQSLGLTAFHLYGHSGGTRIALEYYLAHPEGVRSVIFGGPVFADS
                     LLFRQMAALRATLPDSVQRALARYEREGRCDTPEYEAAIDVFRKRFHDRR"
BASE COUNT          472 a         1115 c         1120 g          494 t
ORIGIN      
        1 tcggcctcga acaccgtgtc cacgaagatg atcaggaccg gcccggtcac gtgcggccgc
       61 gcgaggttca ccgcccccgc cgttccgtcc tggacccgct gctcgatgta gcgacaggga
      121 agaccgtagc gcgaccggga gtaggcctcc acctgctcct tgagatggcc cgtgatgaag
      181 atgagctcgc tcacgtcgag ccccgcgagg gtgtccatca cccagtccat caccggccgt
      241 cccgccacct tgagcatcgg cttcggcacc aggtgggtat ggggccggag ccgggttccc
      301 ttccccgcga gcgggatgat cacctgcacg gtcagctcct tccgtaccgg tccgagagcc
      361 ggaccagatc gtcgagttcg ggggtggagg cctccagcac gtcggtgtcc accaccgcct
      421 cgatctggtg gatgaccccg ggacggatgc ggaccgtttc gcccgcgcgg aacggccgct
      481 ccaccaggtc ggcgtcgcgg ccgagacgaa ggatcagctc gccggacagg acgtgcatcg
      541 tctcgtcctt cacgttgtga tactggcagc tcaggacatg gccggcgttg acgtgcagga
      601 tcttcccgac gtagcggtcg gtgagggccc agatcagctc gtagccccag ggcttctcca
      661 cccgatacgg cgcctccgcc atcaagcctc cgcgagctcg atcgtgaacg aggacggtga
      721 ggtgatgcat tcccggacgc acacgccgca gccgacgcat ccctcccggc ggatcaccgg
      781 gtgtccggcg tcgtcgatga tcagggccgc ctcgccgacc ggacagacat cggcgcagac
      841 ccggcacgcc gtgccctggt aggtgacgca tcgctcgggg aggaaggtca gcgctcccat
      901 acggtacccg gcccatccat ccctcggtag ggtgagcgct cccgtcgggc aggcgcggac
      961 gcagggcatg tcggtgcaga cggtgcacgg ctgcatccgg ggctccagca tcggcgtccc
     1021 cgccgcgagg ccgccgctcg tgggcaccgg acggatggcg tggggcggac agaccggctc
     1081 gcaggcgccg cagcgggtgc aggccgcgag gaaggcgacc tcggggagcg ccccgggggg
     1141 tcggaagtat ttctgctgga cgatccgctc ctcggtcttc tcgaggagct tctccgccca
     1201 ctggccgaag ctctggcgga agaagtcgcg gcggtcgcct ccggtgccga tcaggtcgcg
     1261 cagcggatca ctcatggctc agggccgtcc ggctcgaaac tccggccaga cgttccgggc
     1321 cagcgcggcg agcagacccg agcggattgc cgcctggtcg gggtggttcc ccgcacgctc
     1381 ctcggccgcc gcggtgttga aggccgccac caccgcggtg cccgattcgg ggtgcagata
     1441 gaagaaggcc cggaacccgc gctggctccc ggtatgaccg atgaggcgga gcgtcccttc
     1501 gtgcttcacg aagaagctga gccccaccga atcgcccggc gcctcctccc cgcccgccgt
     1561 catgaccggg cgccacatct cctcgagcga cttccgcgcc agcaccggca ccggcccggt
     1621 ggcgccggga ccgcgcccca ggagaaaggc gaagtacttc gccatgtcgg tgatcggcgc
     1681 gttgaggccg ccgttggaag tggtgatccc ggtgtcgaag tcgagcccgt tcgcgaccgg
     1741 cttcccgtcc cgcacctcgt agttgttcga ccggtcggcc aggaggtgat acggcgtcag
     1801 gtcgaaatag ctgtgcgtca tccccagcgg cttgaggatg ttcttgtcca cgtacacctc
     1861 gaaatcgtcg cccgagagct tctcgatgac ccggccgagg aagatgatgc cggggttgga
     1921 gtagctgtat ttcgatcccg gggggaagag gatctcggtg taggggagca tcgccaccac
     1981 ctgggcccac tcggtcggct cgaaggggtg ccagggcttg tcgccgcccc agggccaggt
     2041 cgggttccgg aagccggcgg tgtggctcat cagctgccgg atggtgatcg cctccatcgg
     2101 gccccagggg ttgtggaccg ccatgagctc ggggacgtac ttcacgatcg ggtcgtcgag
     2161 ggagagccgc ccccggtcgc gcagctgcat gatcgcgacg ccggtgaacg tcttggtgat
     2221 ggacgcccag tggaagatcg tgttggcgtc caccttccgg ccggtcccgg cgtcggccag
     2281 gccgtggaac tcccgggcga gggcggaatc gccccggagg aaccagatcg cgccgccgac
     2341 gatgccctcg cgggcgagtg tcgcgtggaa ggtgtcggcg agggtgcgcc agaccgcggg
     2401 gaatccggcc ggggtctggg cgcgggcagg ggcggcggcg aggaggagcg ccgccagcgc
     2461 gaggcgatgg gtcggcatga tgccgacaat ctaagcggtc cgcgggccgc tctcttgacg
     2521 ggcgcccgga cggggcgagg attgtaccac gcgcacccga ggaggaacgc tcatgacccc
     2581 gttcggccgg atcatcggtg cgctgctgct ggcgccgctc ggtaccaacg gcgtccaggg
     2641 acaatcccga cccacccccc tcacccccgg cgaaggccgc gtggccgtcc ccggagggca
     2701 gatctggtac cgcgtcgtcg gcaccggccg cggcacccca ctggtgctcg tgcacgggtg
     2761 ctgcggcgcg gcgagctact acctcgatcc cctcgccgat ctcggtcgcg accggcccgt
     2821 cgtcttctac gaccagctcg gcaccgggcg ctccgatctg accaccgaca cgatggtgtg
     2881 ggccccggag cggcgcgtcg gggagctcca cctgctgctt cagtcgcttg gcctcaccgc
     2941 attccacctc tacgggcact ccggcggcac ccggatcgcg ctggagtact acctggccca
     3001 ccccgaggga gtccgcagtg tcatcttcgg cggtccggtc ttcgccgact ccctcctctt
     3061 ccgtcagatg gcggccctcc gcgccacgct ccccgactcg gtgcagcggg ccctcgcccg
     3121 gtacgagcgg gaggggcgct gcgatacgcc cgagtacgag gcggcgatcg acgtgttccg
     3181 gaagcgcttt cacgaccgcc g
//
LOCUS       DATIFF010001062         2015 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_136153, whole genome shotgun sequence.
ACCESSION   DATIFF010001062 DATIFF010000000
VERSION     DATIFF010001062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2015
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136153"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..764
                     /locus_tag="VLD58_15550"
     CDS             <1..764
                     /locus_tag="VLD58_15550"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HSB55776.1"
                     /translation="PEVSVRLVTRETVLDRLSAPNAVGILEGSDPALRHEYLVYSAHM
                     DHIGVSPGQPDSVNNGADDDASGTAGVVELAQAFSRPGARPRRSIIFLTVSGEEKGLW
                     GSRYFTEHPPVPIDRIVADLNIDMIGRNWRDTIVAIGKEHSDLGTTLARVNAAHPELN
                     MTAIDDRWPEERFYYRSDHYNFARKGIPVLFFFNGVHADYHRVTDSPDKIDSEKESRI
                     VRLLYYLGREVADADARPKWNPESYRTIVDDPAGH"
     gene            786..1139
                     /locus_tag="VLD58_15555"
     CDS             786..1139
                     /locus_tag="VLD58_15555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSB55777.1"
                     /translation="MADTIADFNAFRARMNDLILGAGNLTINRFFALDHRTYEPGALG
                     TKTKEMLGLVSSLVLRCDDCVTYHVIRCHEEGVTREEFMEIFSVGLVVGGSIVIPHLR
                     RAMGRLEELEAEPAT"
     gene            complement(1335..>2015)
                     /locus_tag="VLD58_15560"
     CDS             complement(1335..>2015)
                     /locus_tag="VLD58_15560"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HSB55778.1"
                     /translation="GALGRLVVLGVVGNTLYQLGFISGLARTTASNSALILAAMPPLT
                     AVSAAMLGLEPARPRVLVGVVVASVGVALVVAAEHRGTGGGSLAGDLLTLGAVVCWVV
                     YTLGLRTLPIGVSPLRVTAVTTVAGLPGLALAGLPQLLSMDWEGVGAAGWAALGYATI
                     FSLVVAYILWNRSVRVVGPSRTVVYMCLTPLVAVGGAAVLLGERPSPLQGVGAALILS
                     GVVLARRA"
BASE COUNT          353 a          734 c          665 g          263 t
ORIGIN      
        1 tgcccgaggt cagcgtgagg ctggtgacca gggagacggt gctcgaccgg ctctcggccc
       61 ccaacgcggt gggcatcctc gagggaagcg atcccgcgct tcgccacgag tacctggtct
      121 attccgcgca catggatcac atcggcgtga gcccgggcca accggacagc gtgaacaacg
      181 gcgcggacga cgacgcctcc ggcaccgcgg gggtggtgga gctggcgcag gcgttcagcc
      241 ggcccggcgc gcgcccgagg cgctccatca tcttcctgac ggtgagcggc gaggagaagg
      301 ggctctgggg cagccggtat ttcaccgagc acccgccggt gccgatcgac cggatcgtgg
      361 ccgacctcaa catcgacatg atcggccgca actggcgcga caccatcgtc gcgatcggga
      421 aggagcactc cgacctcggc accacgctcg cgcgggtgaa cgcggcgcac cccgagctga
      481 acatgaccgc catcgacgac cggtggcccg aggagcgttt ctactaccga tcggatcact
      541 acaactttgc ccggaagggc atccccgttc tgttcttctt caacggggtc catgccgatt
      601 accaccgggt gaccgattct ccggacaaga tcgacagcga gaaggagtcg cgcatcgtgc
      661 gcctgctcta ctacctcgga cgcgaggtgg ccgacgccga tgcccggccg aagtggaacc
      721 cggagagcta ccgcacgatc gtggacgacc ccgccggcca ctgagccggt gatatattct
      781 ccgccatggc cgacaccatc gcggacttca acgccttccg cgcccggatg aacgacctca
      841 tcctgggcgc gggcaacctg acgatcaacc gcttctttgc gctcgaccac cgcacgtacg
      901 agcccggcgc cctcggcacc aagacgaagg aaatgctggg cctcgtctcc tcgctcgtgc
      961 tccggtgcga cgactgcgtg acctatcacg tgattcggtg tcacgaggag ggcgtcaccc
     1021 gcgaggagtt catggagatc ttctcggtgg ggctggtggt gggcgggagc atcgtgatcc
     1081 cgcacctccg gcgggcgatg gggcggctgg aggagctgga ggcggaaccg gcgacatagg
     1141 cggttgggcg gcaaggattc cggaacggaa tgtcatcccg agcgcagcga gggacctact
     1201 ccccgggtgc cgatgggccg caaggattcc ggaacggaat gtcatcccga gcgcagcgag
     1261 ggacctactc cacgggtatc gaaccccgtc gagccgatct ctcgctgcgc tcgggatgac
     1321 cacccctcac ctcctcacgc cctccgcgcc agcaccactc ccgacaggat cagcgccgcc
     1381 cccaccccct gcaggggcga gggccgctcg cccagcagga ccgccgcgcc ccccaccgca
     1441 accagcggcg tcaggcacat gtacaccacc gtccggctcg gcccgaccac ccgcacgctc
     1501 cggttccaca ggatgtaggc cacgaccagc gagaagatcg tggcgtaccc gagagccgcc
     1561 cacccggcgg cgccgactcc ctcccagtcc atcgagagaa gctggggcag gccggccagc
     1621 gcgagcccgg gcagtccggc cacggtggtg accgcggtga cccggagcgg tgacaccccg
     1681 atcgggagcg tgcggagccc gagcgtgtac accacccagc acacgacggc gcccagcgtc
     1741 aggagatccc cggccaggct ccctcccccc gttccccggt gctccgccgc caccaccagc
     1801 gccaccccga cgctcgcgac caccacgccg acgagcaccc gcggccgggc cggctcgagg
     1861 cccagcatag cggcggagac ggcggtgagc ggcggcatcg ccgcgaggat gagcgcgctg
     1921 ttcgacgccg tcgtccgcgc gagaccggag atgaagccga gttggtagag ggtgttgccg
     1981 accacgccca gcacgaccag ccggccgagc gcgcc
//
LOCUS       DATIFF010001063         1803 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_751664, whole genome shotgun sequence.
ACCESSION   DATIFF010001063 DATIFF010000000
VERSION     DATIFF010001063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1803)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1803)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1803
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_751664"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..416)
                     /locus_tag="VLD58_15565"
     CDS             complement(<1..416)
                     /locus_tag="VLD58_15565"
                     /inference="COORDINATES: protein motif:HMM:NF017181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55779.1"
                     /translation="MNRRLPLALIALIVGVAAPLKAQEAARRLAAAERLLSRLIETYG
                     VSGHEEKVRQAILSELPGWAKPETDSAGNIWVRAGKGGAPVVLVAHMDELGYDITSIR
                     DDGTLDVAPRGGMFFSLWEGRPALIHTPAGPLPAVFL"
     gene            complement(413..1354)
                     /locus_tag="VLD58_15570"
     CDS             complement(413..1354)
                     /locus_tag="VLD58_15570"
                     /inference="COORDINATES: protein motif:HMM:NF017181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55780.1"
                     /translation="MTLVKRLPFLLLGLAGPLAAQEPERLDLLARRLAAMTAVSGYEQ
                     SLGDTLVKLLTGARRDRAGNVVLTLGSGEPRSLIACPLDEPGYVVGGIRPDGYLTLRR
                     VGRARGPLADQQIEGQRVTLWGKRGAVPGVVGVRSIHLTNGRPPLPDTPFGVDDAIVD
                     VGAENAAGVAALGIGVLVPVALTKRPFVYADSLLASPSAGRRTACAALLRAAQTTVPP
                     RGTVVVAFVVEQLFTQRGLLTVARNMGPFTDALLLEAGSGANRTGSKASPDSLAMRSF
                     ETWFLPVRHAGTAVETVSLREAAALERGLAFRIRGGE"
     gene            complement(1351..>1803)
                     /locus_tag="VLD58_15575"
     CDS             complement(1351..>1803)
                     /locus_tag="VLD58_15575"
                     /inference="COORDINATES: protein motif:HMM:NF025892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4442 domain-containing protein"
                     /protein_id="HSB55781.1"
                     /translation="SWSSRFSRWGFNFFPAYRGSGARIDYVASDWREVRIRLPLSWRT
                     RNYVGTIFGGSMFSSVDPILMVMLIRVLGPDYLVWDREATIRYIKPGRSTLYARFLLP
                     EGVTESIRADVARLRKVDRVFTVDLTDADGVVHATCTKTLYIRRKRDA"
BASE COUNT          311 a          638 c          596 g          258 t
ORIGIN      
        1 agaaacacag ccggaagcgg accagccggg gtgtgaatca gcgccggacg tccctcccag
       61 agtgagaaga acatcccgcc cctcggcgcg acgtcgagcg tgccgtcatc acgaatcgac
      121 gtgatgtcgt agcccagctc gtccatgtgg gccaccagca ccaccggtgc tccacccttc
      181 ccggcccgca cccagatgtt ccccgcgctg tcggtctcgg gcttggccca gccgggaagc
      241 tcggagagaa tcgcctggcg caccttttct tcgtgaccgg atacgccata ggtctcgatc
      301 aaccgggaca gcaggcgttc cgccgccgcg agccggcgcg ccgcctcctg tgccttgagc
      361 ggcgccgcca cgccaacgat cagcgcgatc agcgcgagcg gaagtcggcg gttcattcgc
      421 ccccccggat tctgaaggcg agccctcgct ccagcgcggc cgcttcccgg agcgagaccg
      481 tctcgaccgc tgtgccggcg tgccgcaccg gaaggaacca ggtctcgaag ctccgcatgg
      541 ccagggaatc gggagacgcc ttgctaccgg tccgattggc tccgctgccc gcttccagga
      601 gcagagcgtc ggtgaacggg cccatgttgc gcgccaccgt caggagcccg cgctgagtga
      661 agagctgctc caccacgaac gccacgacca ccgtgcccct cggcggaacg gtcgtctggg
      721 cggcgcggag gagcgcggcg caggcggtcc tcctccccgc gctgggcgac gccagcagcg
      781 aatcggcgta gacgaacggc cgcttggtga gtgccaccgg taccagcact ccgatcccga
      841 gtgccgcgac gcccgccgcg ttctcggccc cgacatcgac gatcgcatcg tcgacgccga
      901 acggcgtgtc cggaagcggc ggacggccgt tggtcagatg aatcgaccgg acgcccacca
      961 cgccggggac ggcgccgcgc ttgccccaga gcgttacccg ctggccctcg atctgctggt
     1021 ccgccagcgg cccacgggct cgtcccaccc gccggagtgt caggtaccca tcgggacgga
     1081 tcccgcccac cacgtagccc ggctcatcca gcggacaggc aatcagggat cgcggctcgc
     1141 ccgagccgag ggtgagcacc acgttgccgg cccggtcacg gcgggcgccc gtcagcagct
     1201 tgacgagtgt gtcaccgagg ctttgctcgt agccggagac ggcggtcatc gcggcgaggc
     1261 gccgggccag gagatcgaga cgttcgggct cctgggccgc cagcggaccg gcgaggccaa
     1321 ggagcaggaa cggcagtcgc ttcaccaatg tcatgcgtct ctcttgcgtc ggatgtagag
     1381 cgtcttggta caggtggcgt gcaccacacc gtcggcgtcg gtcaggtcca ccgtgaacac
     1441 ccggtcaacc ttgcggagcc gggcgacgtc ggcccgaatc gactcggtca ctccttcagg
     1501 cagcaggaac cgggcataca acgtactacg tcccggcttg atgtagcgga tcgtggcttc
     1561 ccggtcccac acgagataat cagggccgag cacccggatc agcatcacca tgaggatggg
     1621 atcgacggag ctgaacatgc tcccgccgaa gatcgtcccc acatagttcc gggtgcgcca
     1681 gctgagcggc aggcggatcc gcacctcgcg ccagtcggat gcgacgtagt ctatcctggc
     1741 gccgctgcca cggtaggcag ggaagaagtt gaaaccccaa cggctgaagc gggagctcca
     1801 gga
//
LOCUS       DATIFF010001064         1231 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_136288, whole genome shotgun sequence.
ACCESSION   DATIFF010001064 DATIFF010000000
VERSION     DATIFF010001064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1231
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136288"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..890)
                     /gene="sucD"
                     /locus_tag="VLD58_15580"
     CDS             complement(<1..890)
                     /gene="sucD"
                     /locus_tag="VLD58_15580"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018287377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HSB55782.1"
                     /translation="MSILIDETTKVLVQGFTGDKATFHAKEMIAYGTQIVGGVTPGKG
                     GTRHLDRPVFNTVKEAVRETGATASIIFVPAAFCADSIMEAADAGMRFVVTITDGIPA
                     QDMMMVKRYLFRFPKERRTMLVGPNCAGVISPGKAMLGIMPGHIYMRGNVGLVTRSGT
                     LGYEAASQMKALGIGITTSVGIGGDPINGSSFLDHLKLFEQDPETDAVMIIGEIGGPQ
                     EAEAARYAKENMSKPVMGYVAGLTAPKGRRMGHAGAIISAFGDTAAEKAEIMRSAGLT
                     VVTSPAELGTTVAETLRRTKP"
     gene            complement(887..>1231)
                     /locus_tag="VLD58_15585"
     CDS             complement(887..>1231)
                     /locus_tag="VLD58_15585"
                     /inference="COORDINATES: protein motif:HMM:NF012758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55783.1"
                     /translation="FLDVGGGASPDRVAAAFRLVLSDRNIEAMLVNIFAGINRCDWVA
                     QGVVQAARETELKIPLVVRLAGTNVEEGRRILKDSNLPIITADSLSEAADRVVGALKT
                     RSSRSAAGNGQP"
BASE COUNT          173 a          425 c          416 g          217 t
ORIGIN      
        1 ggcttggtcc gcctcagggt ctcggcgacg gtggttccca gctcggccgg actggtcact
       61 acggtgaggc ccgccgagcg catgatctcg gccttttccg cggcggtgtc gccgaatgcc
      121 gagatgatcg cgccggcgtg gcccatgcgg cggcccttgg gcgcggtgag cccggccacg
      181 tagcccatca ccggcttgga catgttctcc ttggcgtacc gcgccgcctc cgcctcctgg
      241 ggaccgccga tctcaccgat gatcatcacc gcgtcggtct ccggatcctg ctcgaacagc
      301 ttcaggtgat cgaggaacga gctgccgttg atcggatcgc cgccgatccc gacgctggtg
      361 gtgatcccga tccccagcgc cttcatctgt gaggcggcct cgtagcccaa ggtgcccgag
      421 cgggtcacca gtccgacgtt cccccgcatg tagatgtgcc ccggcatgat gcccagcatg
      481 gccttgccgg ggctgatgac gccggcgcaa ttggggccca ccagcatggt gcgccgctcc
      541 ttggggaagc ggaacaggta gcgcttcacc atcatcatgt cctgcgccgg gatcccgtcg
      601 gtgatggtga cgacgaaccg catcccggcg tcggcggcct ccatgatcga gtcggcgcag
      661 aacgccgccg gcacgaagat gatgctcgcg gtggcgccgg tctcccggac cgcttccttc
      721 accgtgttga agaccggccg gtcgagatgc cgggtgccgc ccttgccggg agtgaccccg
      781 cccacgatct gggtcccata ggcgatcatc tccttggcgt ggaaggtcgc cttgtcgccg
      841 gtgaacccct gcaccagcac cttggtggtc tcgtcgatga ggatgctcat ggctgtccgt
      901 ttccggccgc gctgcgggag gagcgggtct tgagggcgcc caccacccgg tcggcggctt
      961 ccgagagaga gtcggcggtg atgatcggca ggttgctgtc cttgaggatc cggcggcctt
     1021 cctccacgtt ggtgccggcg agccggacca ccagcggaat cttgagctcg gtctcgcgcg
     1081 ccgcctggac caccccctgg gccacccagt cgcagcggtt gatccccgcg aagatgttga
     1141 ccagcatcgc ctcgatgttc cggtcggaga gcaccagccg gaaggcggcg gccacccggt
     1201 cgggggaggc gccgccaccg acgtccagga a
//
LOCUS       DATIFF010001065         4559 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1214805, whole genome shotgun sequence.
ACCESSION   DATIFF010001065 DATIFF010000000
VERSION     DATIFF010001065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4559
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1214805"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..853
                     /locus_tag="VLD58_15590"
     CDS             <1..853
                     /locus_tag="VLD58_15590"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSB55784.1"
                     /translation="DWQVVSPGYFEAMGMRLVKGRFFDQRDTPDGLQVIAVNQTLVDQ
                     YFAPGEDPIGQRIRIGRGDSPWRTIVAVLADTRHHGLTGPIKREWFVPHSQFAVSWGS
                     PRRAMTLVVRTTADPMSLLAPVARLIAARDPDLPLSHVATMDEVMATAVREQRFTTSL
                     MAGFAVLALLLSTIGIYAVLSYSVSQRTREIGIRLALGAEGGLVQRLVVRQGMEPAVL
                     GIGIGLAAAAGLSRFLSSLLYGVRPLDLATFLLVPAGLLLVALGASLIPARRATRVDP
                     AIALRDE"
     gene            997..2124
                     /locus_tag="VLD58_15595"
     CDS             997..2124
                     /locus_tag="VLD58_15595"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HSB55785.1"
                     /translation="MRNRTRLFASGLALLALGCAQDTASGPAAADQDASSIRLPAQFP
                     HHLVVMNRNIYVGTDVDAVIEALGTADPSDDVPALLQAVATLNETDFTVRARGFAREV
                     SWFHPDVIGIVEVSQIDIDLDLTPLGGPHIVAHEDFLPEIMAALAERHLSYRVAASNR
                     NFTVEPIPGVRLVDYDVTLVGPGVRIDQGVLARNFTTNVGQVAPGVVLTYGFTLVPVT
                     VRGQPYRVATTHLQDDVGGVDLSMLRAAQMQELASLIATDRPAMIVGDFNDPAGTPMY
                     QVATGAGFTDVWASLRPNLPGFTCCHSSDLTDNRVPDQRIDFVMARGFDWHRDPVKGL
                     IVRFGLLPAEMLAGPDHPIFVSDHIGLIASLKTQQLKSQRH"
     gene            2223..2873
                     /locus_tag="VLD58_15600"
     CDS             2223..2873
                     /locus_tag="VLD58_15600"
                     /inference="COORDINATES: protein motif:HMM:NF037007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HSB55786.1"
                     /translation="MTDTDATTAILDAAETLFARQGFAATTIKAIGKEAGVNPALLYY
                     YFPDKERLYHAVLERRLGTAARDAGNQLAAGLPPLDALTLLLRGYARRMHEAPSIPRL
                     LVRELADHQAAHALPIIREIAAGLFRHICELIEAGQAKGAIRRELDPRFTAISLVSQM
                     AWFFVAQPAVSRMLGYEGVVPPEIVERYVDHAVGFSLAALTPSASPAPSSRTRVRP"
     gene            2870..3853
                     /locus_tag="VLD58_15605"
     CDS             2870..3853
                     /locus_tag="VLD58_15605"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HSB55787.1"
                     /translation="MNAHRPLVLLSLLALAACGRSGGEPVYPGTIELDESDAAPLVGG
                     RIVEMRVEEGDSVRPGDTLAILTQSSLPAAVEERRARLAMARARLADLQRGSRAPELA
                     RAEADLAAAEAEADRTAKDLVRVEPLAKGGVLPAQELDRATSAAQAAARRRDAARAVL
                     ELAREGSRSDQIRAAAAEVQSAEAQLKGASADLGELAVLAATGGVILSRHADPGEVVP
                     SGTPVATIGETGRRWVRVYLPASLLARLPAGSHAEVSVAEATRPKDAPPPVEGRLGAV
                     SSKAEYTPRAALTEEERADLLFASRVELLNPPSTFRPGLPVTVRFTPAGSP"
     gene            3850..>4559
                     /locus_tag="VLD58_15610"
     CDS             3850..>4559
                     /locus_tag="VLD58_15610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB55788.1"
                     /translation="MSAPPAIETVELHKRFGSLVAVQSLSLSIPRGEVFGLLGANGSG
                     KTTTIRMLTGLMAPTSGQAIVAGIDVVRNPEIVRHRLGYMSQRYGLYDDLTVEENLRF
                     YAGLYGLVGKEGRDRVEEQISDLGFTTRRRQLAGTLSGGWKQRLSLACATSHRPDVLF
                     LDEPTAGVDPAARRHFWEVIKAMATGGTTILVTTHYMDEAERCERLALLWRGKLEAVG
                     TPHEIIAQLGAPSLEDAF"
BASE COUNT          692 a         1619 c         1519 g          729 t
ORIGIN      
        1 ggactggcag gtagtgagcc ctgggtactt cgaggccatg gggatgcggc tcgtgaaggg
       61 ccgcttcttc gaccagcgtg acacgccgga cggcctccag gtcatcgcgg tgaaccagac
      121 cctggtcgat cagtacttcg ctccgggcga ggacccgatc ggccagcgga tccggatcgg
      181 ccggggcgac agcccctggc gcacgatcgt ggcggtgctc gccgacaccc gtcatcacgg
      241 cctcaccggc ccgataaagc gggagtggtt cgtacctcac agtcagttcg cggtctcctg
      301 ggggagtcct cgccgggcca tgaccctggt cgtgcgcacc accgccgatc ccatgtcgct
      361 cctggcgcca gtggcgcgac tcatcgccgc gcgcgaccct gacctgccgc tctcccacgt
      421 tgccaccatg gacgaggtga tggccacggc ggtacgggaa cagcgcttca ccaccagcct
      481 gatggccggg tttgcggtac tggccctgct tctctcgacg atcggcatct acgccgtgct
      541 gtcctactcc gtgagccagc gcacccggga gatcgggatc cgcctcgcgc tcggcgcgga
      601 agggggactg gtccagcggc tggtggtgcg gcagggaatg gagccggcgg tgcttgggat
      661 cgggattggg ctcgccgccg cggcggggct cagccggttc ctgagctcgc tgctctacgg
      721 cgtgaggccg ctcgatctcg ccacatttct cctggtaccc gcgggcctgc tcctggtggc
      781 gctgggcgcg agcctgatcc cggcgcgccg ggccaccagg gtcgaccccg ccattgcatt
      841 acgcgacgag tagcgagaca acccgtcagg cagagtggcg ctgaatggag tttcaccgcc
      901 gcctcacact gcctgacaca tctggcacta ccttggagcc cgccggggtc ctggcctgat
      961 ggcgccatgg atgcccggtc tcccctggag ggccccatga gaaaccgtac ccgactgttc
     1021 gcctccggtt tggcgctgct ggcgctcggc tgcgcccagg ataccgcgag cgggccggcc
     1081 gccgctgacc aggacgcatc gtccatccgg cttccggcgc agttccccca ccatctcgtc
     1141 gtgatgaacc gcaacatcta tgtcggcacc gacgtggatg cggtcatcga agcgctgggc
     1201 accgccgatc cgagcgatga tgtgcccgcg ctgctgcagg cggtagctac cctcaacgaa
     1261 actgacttca ccgtacgggc cagaggattc gcgcgggaag tgagctggtt ccatcccgat
     1321 gtgatcggca tcgtcgaagt ctcccagatc gacatcgacc tcgacctcac accgctcggc
     1381 gggcctcaca tcgtggccca cgaggacttt ctgcccgaaa tcatggccgc gctggccgag
     1441 cggcacctgt cgtatcgggt ggcggcgagc aaccgcaatt tcaccgtcga gccgatcccc
     1501 ggcgtgcgcc tggtcgacta tgacgtgacg ctggtgggcc cgggcgtgcg gatcgaccag
     1561 ggcgtgctcg cgcgcaactt caccaccaac gtgggtcaag tggcccctgg cgtcgtgctg
     1621 acctatgggt tcaccctggt cccggtcact gtccgcggcc agccctaccg ggtggccacg
     1681 acccatctgc aggatgatgt agggggcgtg gatctctcga tgttgcgagc cgcccagatg
     1741 caggagcttg ccagcctgat cgctaccgat cgcccggcaa tgatcgtggg ggacttcaac
     1801 gaccccgccg ggaccccgat gtaccaggtg gcgaccggcg ccggattcac cgacgtgtgg
     1861 gcctcgctcc gcccgaacct ccccggcttc acctgttgcc acagcagcga tctgaccgac
     1921 aaccgggtgc cggaccagcg gatcgacttc gtcatggccc gcggcttcga ctggcaccgc
     1981 gacccggtca agggcctcat cgtccggttc ggcctgttgc cggcggagat gctcgccggc
     2041 ccggaccatc caatcttcgt cagcgatcac atcgggctga tagcttcgct taagacccag
     2101 cagcttaaga gccagcggca ctagcagtcc aactcaagcg accactgggc cggcatcgac
     2161 cgatgccggc ccttcgtgtc tcggcgcttg acgggcatta attgattgat taattaacag
     2221 ccgtgaccga taccgacgcg actaccgcca tcctcgatgc cgccgagacc ctcttcgccc
     2281 ggcaggggtt cgcggccacc accatcaagg ccatcgggaa ggaggccggg gtcaaccccg
     2341 cgctgcttta ctactacttc cccgacaagg aacggctcta tcacgccgtg ctcgagcgcc
     2401 gcctgggcac cgccgcccgg gacgcgggca accagctggc cgcgggcctg cccccgctcg
     2461 atgctttgac cctgctcctc cgcggctatg cccggcggat gcatgaggcg cccagcattc
     2521 cccggctcct ggtacgcgag ctggccgatc atcaggcggc ccacgcgctg cccatcatcc
     2581 gggagatcgc ggccggtctc ttccgccaca tctgcgagct catcgaggcc ggtcaggcca
     2641 aaggggccat ccgccgggag ctcgatcccc gcttcacagc catctcgctg gtgtcccaga
     2701 tggcatggtt cttcgtggcc caacccgcgg tgtcgcgcat gctgggttac gaaggtgtgg
     2761 ttccacccga gatcgtcgag cgctacgtcg atcacgccgt aggattcagc ctcgccgctt
     2821 tgacgccgtc ggcatcgccg gcaccatcct cccgtacccg agtccggcca tgaacgccca
     2881 tcgcccgctg gtgctcctca gcctgctcgc cctcgccgcc tgcggccgga gcggcggtga
     2941 accggtgtac cccggcacca tcgagctcga cgaaagcgat gccgcgccgc tggtcggcgg
     3001 gcgcatcgtg gagatgcggg tggaagaggg ggacagcgtg aggccgggcg acacactcgc
     3061 catcctgact cagtcgagtc tccccgccgc agtggaagaa cggcgcgccc gtctcgccat
     3121 ggcgcgggcc cggctggcgg atctccagcg cgggtcacgc gcacccgaac ttgcccgggc
     3181 cgaagccgat ctggccgcgg ccgaggcgga ggcggaccgg acggcgaagg acctggtgcg
     3241 ggtggaaccg ctcgcgaagg gcggggtgct tccggcccag gagctcgatc gcgccacctc
     3301 ggcggcccag gccgctgccc ggcgccgcga tgctgcgcgg gcggtgctcg agctcgcgcg
     3361 cgaaggcagc cggagcgacc agatccgtgc ggcggcggcg gaagtgcaga gcgccgaggc
     3421 ccagctcaag ggcgccagcg cggatctggg cgagcttgcg gtgctggccg cgaccggcgg
     3481 cgtgatcctc tcgcgtcacg ccgacccggg cgaagtcgtg ccttcgggca cgccggtcgc
     3541 gactatcggc gaaaccggcc gtcgctgggt cagggtctat ctcccggcca gcctcctggc
     3601 ccggcttccc gccggcagtc atgccgaggt gagtgtggcg gaggccacgc ggccgaagga
     3661 tgcgccgcca ccggtggaag ggcggctcgg cgcggtgagc agcaaggcgg aatacacccc
     3721 tcgcgccgcg ctcaccgagg aggagcgcgc cgacctgctc ttcgcgagcc gggtggagct
     3781 cctcaatcct ccgtcgacgt tccggcccgg tcttccggtc acggtccggt tcacaccggc
     3841 aggctcgcca tgagcgcccc tcccgccatc gagacggtcg agctccacaa gcggttcggg
     3901 tcgctggtcg cggtccagtc gctctcgctc tcgatccccc ggggcgaggt cttcgggctc
     3961 ctcggcgcca acgggtcggg caagaccacc accatccgga tgctcaccgg tctgatggcg
     4021 cccacctcgg gccaggccat cgtggccggc atcgacgtgg tgcggaaccc ggagatcgtc
     4081 cgccaccggc tgggctacat gtcgcagcgg tacgggctct acgacgatct caccgtcgag
     4141 gaaaacctgc ggttctatgc cgggctctac ggactggtgg ggaaggaagg gcgagaccgg
     4201 gtggaggagc agatcagcga cctcggcttc accacccggc gccgccagct ggccggcacc
     4261 ctgtccggag ggtggaagca gcggctctcg ctcgcctgcg ccaccagtca ccggcccgat
     4321 gtgctcttcc tcgatgaacc aaccgcggga gtggatcccg cggcccggcg tcatttctgg
     4381 gaagtgatca aggcgatggc gacgggcggc accaccatcc tggtcaccac ccactacatg
     4441 gacgaggcgg aacgctgcga acggctggcc ctcctctggc ggggcaagct cgaggccgtc
     4501 ggcactcccc atgagatcat cgcccagctg ggcgcaccgt cgctcgagga tgcattcat
//
LOCUS       DATIFF010001066         3164 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1214839, whole genome shotgun sequence.
ACCESSION   DATIFF010001066 DATIFF010000000
VERSION     DATIFF010001066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3164
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1214839"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1017)
                     /locus_tag="VLD58_15615"
     CDS             complement(<1..1017)
                     /locus_tag="VLD58_15615"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSB55789.1"
                     /translation="MRALSMETELTVPALLRRTRAHFGDKRVISRRSDGRLHRTTYAE
                     VLARADRLSAALIRIGVKPGTPVATLCWNHDRHLEAYYAVSAIGAVLHTLNLRLHPDE
                     LAYIATDAGDRVLLADEEMLPLLEAFRARSPIEQVIVIRSTEAALAPGDLDYEALLNE
                     VGPARPPELDVSERDAAAMCYTSGTTGRSKGVVYSHRCIVLHSLMLATTDLFGLGERD
                     VVLPAVSMFHANAWGLPYAAPWVGADLLLPGRQLDARTLLDLLVNERVTCTAGVPTVW
                     LPLLELLDQEPGQDLSALRLLVIGGAALPEALLRGLTERHNVPAVHSWGMTELAPVGT
                     LARLP"
     gene            complement(1077..1934)
                     /locus_tag="VLD58_15620"
     CDS             complement(1077..1934)
                     /locus_tag="VLD58_15620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB55790.1"
                     /translation="MPRPLASVWADSRGRTGLILLGLIVLLAAAAPGVTSFDPNAQGD
                     VVATRFKAPLTSDGAGALHLLGTDRFGRDVWTRLVYGARVSLATGLAATAIAVVLGLL
                     VGAAAGVWRGPVGTILLAFTDFALALPRVVLLLILAALWPPSGTLVIVVLGLTGWMSI
                     ARLVYGETQSLMARPFTSAAEALGASRPWIAWRHVVPNVWTPVIIAAALGVGNAITLE
                     AGLSFLGLGVQPPAPSWGNMIASGRDTLINAPWVAIAPGVALVVVVVACTLVGDALRD
                     RLAGTELPQ"
     gene            complement(1927..2889)
                     /locus_tag="VLD58_15625"
     CDS             complement(1927..2889)
                     /locus_tag="VLD58_15625"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB55791.1"
                     /translation="MPSRLLARLLAGLGVILGVVTLTFVLLHLAPGDPAVHLAGPAAT
                     PEQLAALRTELGLDHPLWRQFGEWLIRAGRGDWGRSVATGRPVARMLLEAWPATALLV
                     LTSLGGSYLFAIVLGLWQVRASRRVDTSLTTASVTLFAMPGYWLAVLLVWLFAYHLRW
                     LPAFGAQGLDADFLGPADRLLDRMRHLALPFLTLTLIGVGGALRFIRGALLDVRGEPF
                     LVAAQARGLPNAVVSRRYLLANALGPVMTLLGLSLPAIFSGAIFVEGIFAWPGVGQVL
                     IQGVAARDYPVVMAAATVSAILVVAGNLLADGLRALVDPRIRDA"
     gene            2979..>3164
                     /locus_tag="VLD58_15630"
     CDS             2979..>3164
                     /locus_tag="VLD58_15630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55792.1"
                     /translation="MPFRRPLPVLLALTLACGPEAHRRGATVMYASGADLQSINPLLT
                     VHPLARQVQRYVLLTTLV"
BASE COUNT          571 a         1082 c         1123 g          388 t
ORIGIN      
        1 tgggagccgg gccagcgtgc cgaccggtgc cagctcggtc atcccccagg aatgcaccgc
       61 cgggacgttg tgccgctcgg tcagcccgcg gagcagagct tcgggcaggg ccgcccctcc
      121 aatgaccagg aggcgcaggg cggagagatc ctggcccggc tcctggtcca gcaactcgag
      181 gagcggcagc cacacggtcg gcacaccggc ggtgcaggtc acccgctcgt tcaccagcag
      241 gtcgaggagg gtacgggcat cgagctgacg gcccggaagg agcaggtccg cccccaccca
      301 tggcgcggcg tagggaaggc cccacgcgtt ggcgtgaaac atcgacacgg ccgggagcac
      361 cacgtcacgc tcacccaggc cgaagagatc ggtcgtcgca agcatcaacg agtggagcac
      421 gatgcaacga tgggagtaga ccacgccttt ggagcgtccg gtcgtgccgg aggtgtagca
      481 catcgccgcc gcgtcgcgct cgctgacatc gagctccggc ggtcgagcgg gtccgacttc
      541 gttgagaagc gcctcgtagt ccaggtcgcc gggggcgagg gccgcttcgg tgctccggat
      601 gacgatcacc tgctcgatgg gcgagcgggc gcgaaacgcc tccagcagcg ggagcatctc
      661 ctcgtcggcc agcagcaccc tgtcaccagc atccgtggcg atgtaggcaa gctcgtccgg
      721 gtggagccgc agattcaggg tgtggagcac ggcgccgatg gcggagacgg cgtagtacgc
      781 ttccaggtgc cggtcgtggt tccagcagag ggtggcgact ggagtacccg gcttcacgcc
      841 gatccggatg agcgccgccg acaggcgatc cgcccgtgcg agcacctcgg cgtaggtagt
      901 gcggtgcaac cgcccatcgc ttcgccggga gatgacccgc ttgtcgccga aatgcgcccg
      961 ggtgcgccgg agcagggcgg gaacggtcag ctcggtctcc atcgacagcg cgcgcatgcc
     1021 acgttccacg ttctctgctc cgtgagtttc agggatgccc tgagcccggc ggccggctac
     1081 tgcggcagct cggttcccgc gagccggtcc cgcaacgcat cacccaccag cgtgcatgct
     1141 acgaccacca ccacgagcgc aacgccgggg gcgatagcga cccacggcgc attgatcagc
     1201 gtgtcacgcc cggacgcgat catgttgccc cacgacgggg ccggcggctg cactccgagc
     1261 cccaggaatg acaggccggc ttcgagcgta atggcgttgc cgacgccgag ggctgccgcg
     1321 atgatcaccg gcgtccacac attgggaacg acgtggcgcc acgcgatcca tggccggctc
     1381 gcaccaagcg cttccgcggc gctggtgaag gggcgggcca tgaggctctg ggtttcgcca
     1441 tagaccagcc gcgcgatgct catccacccg gtaagaccga gcaccacgat caccagcgta
     1501 ccactgggcg gccagagcgc ggccaggatc aggagcagca cgacccgcgg gagggccagc
     1561 gcaaagtcgg tgaacgcaag caggatggtt cccaccggcc cgcgccacac accggccgcc
     1621 gctcctacca ggagcccgag caccaccgca atggccgtcg ccgcgaggcc ggtggcgagc
     1681 gagacccggg cgccatagac cagccgggtc cagacatcgc ggccgaagcg atcggtgccg
     1741 aggagatgca atgcgccggc gccgtcggag gtgagcggtg ccttgaagcg ggtcgcgacc
     1801 acgtcgccct gggcgttggg gtcgaatgac gtcacgccgg gcgccgcggc ggcaagcagc
     1861 acgatcaggc cgagcaggat cagcccggtg cggccgcggg agtcggccca gacggaggcg
     1921 agcggtctag gcatcgcgaa tccgcggatc gaccagcgcc cggagaccgt ccgccaggag
     1981 attgcccgca acgacgagaa tggcgctcac cgtggcagcg gccatgacga cgggatagtc
     2041 tcgtgcggcg actccctgga tcaggacctg ccccacgccg ggccaggcga agatcccttc
     2101 gacaaagatg gcgccggaga agatggccgg cagcgagagc ccgagcagcg tcatcaccgg
     2161 cccgagcgca ttggccagga gataccgccg cgacacgacc gcgttgggaa gtccgcgagc
     2221 ctgggccgcg accagaaacg gttcgccccg cacgtcgagg agcgctccgc ggatgaaccg
     2281 cagcgcgccc cccacgccga tcaaggtgag ggtcagaaag ggaagggcga ggtgacgcat
     2341 ccgatcgagc aggcggtcgg ccggacccag gaagtcggcg tccagcccct gggcgccgaa
     2401 ggccgggagc cagcggagat ggtaggcgaa gagccagaca aggagcacgg cgagccagta
     2461 tcctggcatc gcgaagagtg tcaccgacgc cgtggtgagc gaggtgtcca ccctgcggct
     2521 ggcccgaacc tgccagagcc ccaacacgat cgcgaagagg tagctacccc caagcgaggt
     2581 caggaccagg agtgcggtag ccggccacgc ctcgagcagc atgcgggcca ccgggcggcc
     2641 ggtcgccaca ctccgccccc aatcgcctcg gcccgcgcga atcagccact ccccgaactg
     2701 cctccagaga ggatggtcga gtcccagctc ggtacgcagc gcggcgagct gctctggggt
     2761 cgcggccgga cccgcgaggt ggaccgcggg gtcgcccgga gcaagatgga gcagcacgaa
     2821 ggtgagggtg accacgccga ggatgacgcc gagaccggcg aggaggcggg caaggagccg
     2881 agagggcatg acagaatgtg gagcgtcgaa gggcgcgtga gaagggtcga ctgctggcac
     2941 ctcttccccg cgcgcggctc caccggcacc tttggcgcat gccgttccgc cgcccgcttc
     3001 cggtcctgct cgcactcacg ctcgcatgcg gacccgaggc acaccggcgt ggcgccaccg
     3061 tgatgtatgc ctcgggcgcc gacctccaga gcatcaaccc cctcctcact gtgcatccgc
     3121 tggcccggca ggtgcagcgc tatgtgctgc ttaccacact ggtc
//
LOCUS       DATIFF010001067         1182 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1983217, whole genome shotgun sequence.
ACCESSION   DATIFF010001067 DATIFF010000000
VERSION     DATIFF010001067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1983217"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            66..383
                     /locus_tag="VLD58_15635"
     CDS             66..383
                     /locus_tag="VLD58_15635"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HSB55793.1"
                     /translation="MAKLSDLKSIDEVIEEHREADPEFRERWDRARFARAVAVKIIGY
                     RTEHGLTQTQLAKDVGTTQSVIGRLELGEQPPSLATLAKLTARTGLEFHLDITGGDVA
                     LSA"
     gene            730..>1182
                     /locus_tag="VLD58_15640"
     CDS             730..>1182
                     /locus_tag="VLD58_15640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55794.1"
                     /translation="MTVALMTLVNNVELSPTPGISVRACRAVLRCMARLASDDGEFRY
                     GMRQSKVAALAEYSAATIKRAQRWLVEHGYLERVTTGGGRRSTRWRIRVDRLRPTPPP
                     DPPRASSQPPMNQQPARDEPAQNRTQIFSKTYSPGAPAAATTTDAVVTD"
BASE COUNT          200 a          467 c          351 g          164 t
ORIGIN      
        1 gatcgaaacc gagctgaaga agctgagagc tctgggcccc caagctcggc tacctggagg
       61 tgccgatggc gaaactgtcg gatctcaaga gcatcgatga ggtcatcgag gagcaccgcg
      121 aggccgaccc ggagtttcgc gagcgctggg accgcgcccg gttcgctcgc gccgtcgccg
      181 tgaagatcat cgggtaccgc accgagcacg gcctgaccca gacgcagctg gccaaggacg
      241 tcgggaccac ccagtcggtc atcggccggc tcgagctcgg tgaacagccc ccctccctgg
      301 cgacgctggc caagctcacc gcccggacgg ggctggagtt ccacctcgac atcaccggcg
      361 gggacgtagc gctgtccgcc tagcggtcgg ctcctcgccg attgccgcag cgcctgatac
      421 ggcgagacct cgctggccaa tttcacgggt cgccctgatc gccgacacgc ccaaagctcc
      481 gctagccggc cgtatccaca tccagctggg aggatcgctg cgcgtatgcc cgaatcccgg
      541 gctgcgctaa caggcgctcg gaccctcacg ctgatcagga ggtcacgtcc ctcgccgggc
      601 cggcaacccg agacatctac acaaagctga aggcgagccc tcgccggctc gccttccaca
      661 gcttctctag gacgcgactg tgacgatgcc acagctcgcc cggtctgtca cgccccccgg
      721 cggcgtgtca tgaccgtggc gctcatgacc ctggtcaaca acgtcgagct ctcccccacc
      781 cccggcatct ccgtacgggc ctgccgggcg gtgctgcgct gcatggcccg cctcgcctcc
      841 gacgacggcg agttccgcta cgggatgcgc caatccaagg tcgccgccct cgccgagtac
      901 tccgccgcga ccatcaagcg cgcccagcgc tggctcgtcg agcacggcta cctcgaacgc
      961 gtcaccaccg gcggcggccg ccgctccacc cgctggcgca ttcgggtgga ccggctccgt
     1021 cccactcccc cacccgatcc accacgagcc agctcccagc ccccgatgaa ccagcagccg
     1081 gcccgggatg agccagccca gaaccgcacc cagatcttct ccaagaccta ctcccccggc
     1141 gcacccgccg ctgccacgac gaccgacgct gtggtcaccg ac
//
LOCUS       DATIFF010001068         3075 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_903951, whole genome shotgun sequence.
ACCESSION   DATIFF010001068 DATIFF010000000
VERSION     DATIFF010001068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3075
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_903951"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1262
                     /locus_tag="VLD58_15645"
     CDS             <1..1262
                     /locus_tag="VLD58_15645"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HSB55795.1"
                     /translation="VTQDDEQIIERIAALDIGKAEVACCVRVPDLAGSGKRMQEVSTH
                     TTMTRSLLRLADRLQELGVTRVVMEATSDYWKGPFYLMEAAGFETWLVNAKDVKHLPG
                     RPKRDTIDAVWLCKVAERQMLRPSFVPPPAIRMLRDLTRYRADLVSVESAERNRVEKL
                     LEDAQVKLSVVASDIFGVSGREMMQALINGERDPKVLAQMARTRMRARIADLEEAFYG
                     CRFTDHHAFLLTKMLARIDATAADIATVEARIEELIAPFADAVERLTAIPGIGPTTAQ
                     AIIAEIGVDMTRFPTPAHLASWAKFSPITKESAGKVKGKNSTGHGNPYLARALGQAAV
                     NAGRTDTFLGERYRRIARRRGKKKAIVAVGRSILTVIWHLLSNPDATFIDLGPDHYDT
                     RGGTQRAIRNHVTRLEALGYKVTLEVA"
     gene            1501..2751
                     /locus_tag="VLD58_15650"
     CDS             1501..2751
                     /locus_tag="VLD58_15650"
                     /inference="COORDINATES: protein motif:HMM:NF033592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HSB55796.1"
                     /translation="MARVGQQVAGLGEDRLPGRVAVGVLTRVFPPALVDELIAAAGVG
                     EQRVRVLPARLVVYYNLAMIVFFQSSYGQVWSKLVGGLEWGRSFRVRVAVGMSPSAAA
                     ISKARGRLGWKVMADLLEAVAGPLAGEHDQWAHVAGLRLVAFDGLTVDVPDTVDNAET
                     FGRPGGGAGAGAFPQVRVVALAECGSRAVMGARCAGITTGEQTLAEDLLGLLGEGMLV
                     VADRNFLSHAALAATLATGAHVLWRAKADTDLPVLKILPDGTYLSRIADPAASRRLRR
                     RGKSGGDIPGITVRVIEYSVAAADDSDVSELFCLITDLLDPADLSAADAAAAYAQRWE
                     IETAFAELETGIRGGPAVVLRSKSPDMIRQELYALLCVYQAIRTLICHAADTASLDPD
                     RISFTRAKEAIAARVSDAAALSPH"
     gene            2723..2947
                     /locus_tag="VLD58_15655"
     CDS             2723..2947
                     /locus_tag="VLD58_15655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55797.1"
                     /translation="MTPRRFPPTDLPDLVADLVAEITYHRHLVPARQARSYPRAQKRP
                     GGRFRTKKPADRAPLTPRTKIIFWRLTSPT"
BASE COUNT          493 a         1047 c         1072 g          463 t
ORIGIN      
        1 aggtcacgca ggacgacgag cagatcatcg agcggatcgc ggcactcgac atcggcaagg
       61 ccgaggtggc gtgttgcgtg cgggtcccgg acctggccgg ctccggcaag cggatgcagg
      121 aggtgtccac gcacacgacg atgacccggt cgctgttgcg gctggcggac cggttgcagg
      181 aactgggagt gacccgggtg gtgatggaag caaccagcga ctactggaag ggcccgttct
      241 acctgatgga agccgccggg ttcgagacct ggctggtcaa cgccaaggac gtcaagcacc
      301 tgcccggccg cccgaaacgc gacacgatcg atgcggtctg gctgtgcaag gtcgccgagc
      361 gacagatgct gcggccgagt ttcgtgcctc caccagcgat tcggatgctg cgggatctga
      421 cccgctaccg cgccgacctg gtctcggtcg agtcggccga acgcaaccgg gtcgagaagt
      481 tgttggagga cgcccaggtc aagctgtccg tcgtggccag cgacatcttc ggggtctccg
      541 gacgggagat gatgcaggca ctgatcaacg gtgagcgtga cccgaaggtg ctggcacaga
      601 tggcccgcac ccggatgcgc gcccggatcg ccgacctgga ggaagcgttc tacggctgcc
      661 ggttcaccga ccaccacgcg ttcctgctca ccaagatgct ggcccggatc gacgccaccg
      721 cggccgacat cgccaccgtc gaggccagga tcgaggagct gatcgcccct ttcgctgacg
      781 cggtggagcg gctcaccgcc atcccaggga tcggccccac caccgcccaa gcgatcatcg
      841 ccgagatcgg ggtggacatg acccgcttcc ccacccccgc ccacctggcg tcctgggcga
      901 agttctcccc gatcaccaag gagtccgccg gcaaggtcaa ggggaagaac tccaccgggc
      961 acggcaaccc ctacctggcc cgggctctgg gccaggcagc agtcaacgcc ggccggaccg
     1021 acaccttcct cggcgaacgc taccgacgca tcgcccggcg acgcggcaag aagaaggcca
     1081 tcgtcgccgt cggcagatcc atcctgaccg tgatctggca cctgctgtcg aaccccgacg
     1141 ccaccttcat cgatcttggc cccgaccact acgacacccg cggtggcacc caacgcgcca
     1201 tccgcaacca cgtcacccgc ctggaagccc tcggctacaa ggtcaccctc gaagtcgcct
     1261 gaccaacacc cacggcaggg tcaaccccat cccggctccg ctgcgctgcg ccgggaagct
     1321 gtcgcctgcc cactcacctt ctattttcga accagagcct gtacgtggag cggatcgctg
     1381 cgctggacct ggggaaggcg gtgctcgagg cgtgcgtgcg gttgccgcac ccgaccaggc
     1441 ccgggcggcg gatccaggca atggcgttaa cttagctgcc ggacctgcta tgatcttggg
     1501 atggcgcggg tcgggcagca ggtggcgggg ttgggcgagg atcggctgcc gggccgggtc
     1561 gcggtcgggg tgttgacgag ggtattcccg ccggcgctgg tggatgagct gatcgcggcg
     1621 gcgggggtcg gggagcagcg ggtccgggtg ctgccggcgc ggctggtcgt gtactacaac
     1681 ctggcgatga tcgtgttctt ccagtccagt tacgggcagg tgtggtccaa gctggtcggt
     1741 gggttggagt ggggcaggag tttccgggtc cgggtcgcgg tggggatgtc cccgtcggcg
     1801 gcggcgatct ccaaggcccg tggtcggctg ggctggaagg tgatggccga cctgctggag
     1861 gccgtcgcgg ggccgctggc cggtgagcac gaccagtggg cgcacgtggc ggggctgcgg
     1921 ctggtggcgt tcgacggtct gacggtggat gtgcccgaca cggtggacaa cgccgagacc
     1981 ttcgggcgtc cgggcggcgg cgcgggggcc ggggcgttcc cgcaggtacg ggtggtggcg
     2041 ttggccgagt gcgggtcccg ggcggtgatg ggagcacggt gcgccgggat caccaccggg
     2101 gagcagacgc tggccgagga cctgctgggg ctgctgggcg aggggatgct ggtggtcgcc
     2161 gaccgcaact tcctgtccca cgccgcgctg gcggcgacgc tggccaccgg cgcgcacgtg
     2221 ctgtggcggg ccaaggccga caccgacctg cccgtcctga agatcttgcc cgatggtacg
     2281 tacctgtccc ggatcgccga cccggcggcg tcgcggcgcc tgcgccgcag gggcaagtcg
     2341 gggggcgaca tcccggggat caccgttcgg gtcatcgagt actccgtggc cgccgccgac
     2401 gacagtgacg tctcggagct gttctgcctg atcaccgacc tgctggaccc cgccgacctg
     2461 tccgcggcgg acgcggcggc ggcctacgca cagcgatggg agatcgagac ggcgttcgcc
     2521 gaactggaga ccgggatccg cggcggcccg gcggtcgtgc tgcgctccaa gagccccgac
     2581 atgatccgtc aggagttgta cgccctgctg tgtgtctacc aggcgatccg gaccctgatc
     2641 tgccacgccg ccgacaccgc gtcgctggac cccgaccgga tctccttcac ccgagccaag
     2701 gaagcgatcg ccgcccgcgt cagtgacgcc gcggcgcttt ccccccactg acctgcccga
     2761 cctggtcgcc gatctggttg ccgagatcac ctaccaccgc catctcgtcc ccgcccgcca
     2821 ggcccgctcc tacccccgcg cccagaaacg tcccggcggc cgcttccgca ccaagaaacc
     2881 cgccgaccgg gcacccctca caccacgaac caagatcatc ttctggcgac tcacgtcacc
     2941 aacctaaaat taacgccatt gggatcggcc cgccgggcga tgagcgagtt ggtgtgtgcg
     3001 tcgaggccat cgcggaccaa agatgtgagc gctaacacac tggggccgaa aggaacctcc
     3061 cgaccagaat cggtt
//
LOCUS       DATIFF010001069         2260 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_598446, whole genome shotgun sequence.
ACCESSION   DATIFF010001069 DATIFF010000000
VERSION     DATIFF010001069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2260
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_598446"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..597)
                     /locus_tag="VLD58_15660"
     CDS             complement(<1..597)
                     /locus_tag="VLD58_15660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55798.1"
                     /translation="MPHNLSKSRFVAGWQCPKQLWLRVYEKDAPELQVDVVLQDRFDQ
                     GAEVGALARAQFPGGVLIDLPHDHPERVAATRLALDQGAPAVFEATFVEDRVYVAIDV
                     LERTGDGFTLIEVKSSTKQKDEHIPDVAIQLWVARRAGLDIRRVELMHLNSEFRHPGQ
                     GELLIRTDVTADAERMQPRIPAMIEEQLAALDGTLPPVA"
     gene            632..>2260
                     /gene="nagB"
                     /locus_tag="VLD58_15665"
     CDS             632..>2260
                     /gene="nagB"
                     /locus_tag="VLD58_15665"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004342 - glucosamine-6-phosphate
                     deaminase activity [Evidence IEA];
                     GO_process: GO:0006046 - N-acetylglucosamine catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HSB55799.1"
                     /translation="MKPRLRTIVIDDHAELARQVARRIADLITERNRAGRSTVLGLAT
                     GSTPIGVYRELIRFHREEGLSFKRVVTFNLDEYYPMAPDSPHSYHRFMWENFFDAVDI
                     DRANVHIPRGDLPREAVADAAAAYEAAIKAAGGIDLQLLGIGKTGHIGFNEPGSGGDS
                     RTRRISLDPVTRKDAAADFFGEDNVPREAVTMGVGTILEAREILILATGEHKAEIIRK
                     AVEGEVDLEVAATFLQRHPNTTCYVDRAAAALLTPIATPWLIDEVDWTPDLALRAVTW
                     LSHATGKAILKLTQRDYAEHSLSALVARHESAGALNGLVFNALGAKIRGRSKLPRARR
                     VICFSPHPDDDVISAGGLLRKLAQNDNRITVAYMTSGNIAVFDHDVRRHLDFLLRLTH
                     EWKLAEPAVRAIAARVEQHLAGKAPGAVDITEVLDLKRMIRESEAVSGLGVLGIPPGA
                     AHFLNLPFYQTGRVRKDPVGPADVAIVRRLLDELDPELVLVAGDLSDPHGTHRMCKEV
                     IEQALDQRAAGSPAAAVPEVWLYRGAWQEWPVTEA"
BASE COUNT          371 a          804 c          733 g          352 t
ORIGIN      
        1 tgccactgga ggaagcgtcc catccagcgc cgccagctgc tcctcgatca tcgccgggat
       61 gcgtggctgc atgcgctccg cgtccgccgt cacgtcggta cggatcagaa gctcaccctg
      121 gccgggatgg cggaactcgg agttgaggtg catcagctcg accctgcgga tgtcgagtcc
      181 tgcccggcgg gccacccaga gctggatcgc gacgtccgga atgtgctcgt ccttctgttt
      241 ggtcgaggac ttcacctcga tcagggtgaa cccgtcgccg gtccgttcca gtacatcgat
      301 cgcgacgtag acccggtctt ccacgaacgt cgcctcgaac acggccggcg ctccctggtc
      361 gagcgccaga cgggtggcag ccacccgttc agggtggtcg tgcggcagat cgatcagcac
      421 acctcccggg aactgcgccc gtgccagggc gccaacttcg gccccctgat cgaagcgatc
      481 ctggagcacc acgtcgacct ggagctcggg cgcgtccttc tcgtacaccc ggagccagag
      541 ctgcttggga cattgccagc cggccacgaa gcgggacttg gagaggttgt ggggcatggc
      601 tggcaagcta catcctctgc agattcaagg catgaaaccc cgcctccgca ctatcgtcat
      661 cgacgatcac gccgagctgg cccgccaggt cgcgcgccgg attgccgatc tcatcaccga
      721 gcggaaccgg gccggccgct ccaccgtcct cggactcgcg accggctcca ccccaatcgg
      781 ggtctaccgc gagctgatac ggtttcaccg ggaagaggga ctcagtttca agcgggtggt
      841 gacattcaac ctggacgagt actacccgat ggcccccgac agtccccact cctaccaccg
      901 cttcatgtgg gagaacttct tcgacgcggt cgacatcgac cgggccaacg tgcacatccc
      961 ccgtggcgac ctgccgcgcg aggccgtggc cgatgccgcc gccgcctacg aagcggccat
     1021 caaggccgcc ggcggcatcg atctccagct cctcggcatc ggcaagaccg ggcacatcgg
     1081 cttcaacgag cccggctccg ggggcgacag ccgcacccgc cggatctcgc tcgacccggt
     1141 gacgcggaag gacgccgccg ccgatttctt cggcgaggac aacgtccccc gcgaagcggt
     1201 cacgatgggt gtcggcacca tcctcgaagc ccgcgagatc ctgatcctcg ccaccggaga
     1261 gcacaaggcc gagatcatcc ggaaggcggt ggagggagag gtcgacctcg aggtcgccgc
     1321 cacctttctc cagcggcacc cgaacacgac ctgctacgtc gatcgcgccg ccgcggccct
     1381 gctcacgccg atcgccacgc cctggctgat cgacgaggtc gactggacgc ccgacctcgc
     1441 ccttcgcgcg gtcacctggc tctcgcacgc caccggcaag gcgatcctca agctcactca
     1501 gcgcgactac gccgagcatt cgctgtcggc gctggtggcg cggcacgaat cggcgggggc
     1561 gctcaacggc ctggtgttca acgcgctggg cgccaagatc cggggccgct ccaagctgcc
     1621 cagggcgcgg cgggtgatct gcttctcgcc ccacccggat gacgacgtga tctcggctgg
     1681 cggcctgctg cgcaaattgg cccagaacga caatcggatc acggtcgcct acatgaccag
     1741 cggcaatatc gcggtcttcg accacgatgt gcgccgacac ctcgatttcc tgctgcgtct
     1801 cacccacgag tggaagctgg ccgagcccgc ggtgcgggcc attgccgcca gggtcgagca
     1861 gcacctggcc gggaaggccc ccggcgccgt cgacatcacc gaggtgctcg acctcaagcg
     1921 gatgatccgg gagtccgagg cggtgagcgg tctcggcgtg ctcgggattc caccgggcgc
     1981 ggcgcacttc ctcaacctgc cgttctatca gaccggacgg gtccgcaagg atccggtggg
     2041 gccggccgac gtcgccattg tccgccggct gctcgatgag ctcgaccccg agctggtgct
     2101 cgtggccggc gacctgtccg atccgcatgg cacccatcgc atgtgcaagg aagtgatcga
     2161 gcaggctctg gaccagcggg cggcgggcag cccggctgcg gcggtgcccg aggtctggct
     2221 ctatcgcgga gcgtggcagg agtggccggt gaccgaagcg
//
LOCUS       DATIFF010001070         1840 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_137426, whole genome shotgun sequence.
ACCESSION   DATIFF010001070 DATIFF010000000
VERSION     DATIFF010001070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1840)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1840
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137426"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            240..752
                     /locus_tag="VLD58_15670"
     CDS             240..752
                     /locus_tag="VLD58_15670"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HSB55800.1"
                     /translation="MNETVRRAQQGDHAAFRTLYQEHIGRVYAVCLRLDGNVGEAEEH
                     AQDVFVRVWERLASFRGESAFSTWLHRLTVNVVLHARRTAGRRGSRVTLADDPLELDA
                     VAAPAAQPTEDLNQAIARLPAGARMVFVLHDVEGYQHDEIASLLDIAEGTSKAQLFRA
                     RRLLREMLNR"
     gene            749..1372
                     /locus_tag="VLD58_15675"
     CDS             749..1372
                     /locus_tag="VLD58_15675"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HSB55801.1"
                     /translation="MTCADISALLDDYIDGALPADQVRRVEKHLAGCESCRAEVAGLR
                     SILTDARALPRTVLPAKDLWAGIESRLPSAPPVPLRPRRPLLQRPLVQLAAAVFLLLA
                     GATFATLYLRGRTGSPSTFALEQQRYTAATADLARKLADDPALLSATTRAVVERNLTI
                     VDQAIQEAEHALATDPGNTELEQMVLARYAQRLALLKHATEAGRRES"
     gene            1372..>1840
                     /locus_tag="VLD58_15680"
     CDS             1372..>1840
                     /locus_tag="VLD58_15680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55802.1"
                     /translation="MSGGLGVRRSGGQVFRGRMSLVAALLCLSISRSSSAQDAVSAGR
                     AAARDAAIRIFVVTGSLRVTAWDRDSVSVKGRVDPAAGRFFLGGTQNALKLGVEVPAG
                     KEPDGTSDLDVNVPAGARLWIKSTAADVEVTAAGGAIVVNGTSGRIRVAGTASE"
BASE COUNT          277 a          650 c          629 g          284 t
ORIGIN      
        1 acccgagacg tgggactcgg ccaggaggga gattgcctcc ccgatggtgt cggtgccacg
       61 caccgtcatc agattggtct gcatgatctc ggagactttc acggggtcct cccttaaggg
      121 gctgctccca tacaacaaca ggacgactga atggaccgtg aaggcctcat gagaagcccg
      181 gttcaaaccc cgccggggcc ggcggcatcc caccaccgaa tgatgcgaac ccgggtccag
      241 tgaacgaaac ggtccgccgc gcccagcaag gggatcatgc cgccttccgt accctgtacc
      301 aggagcacat cggacgggtg tacgcggtgt gcctccgcct ggacggaaac gtcggcgagg
      361 cggaggagca tgcgcaggat gtgttcgtgc gggtgtggga gcggctggcg agtttccggg
      421 gcgagagcgc cttctccacc tggctccacc gcctcaccgt gaacgtggtg ctgcacgccc
      481 ggcggacggc gggccggcgc ggcagccggg taaccctggc cgatgacccg ctcgagctcg
      541 atgcggtcgc cgcgcccgcg gctcagccga ccgaggatct caaccaggcg atcgcccgcc
      601 tgccggccgg ggcgaggatg gtgttcgtgc tccatgatgt cgaaggctac cagcatgacg
      661 agatcgcgag cctgctggac atcgccgaag gaaccagcaa ggcgcagctc ttccgggcgc
      721 gccggctgtt acgggagatg ctgaaccgat gacctgcgcc gacatttccg ccctgctgga
      781 cgactacatc gacggcgccc tgccggccga tcaggtacgc cgggtcgaga agcacctggc
      841 cggctgcgag agttgccgtg ccgaggtggc ggggctccgc tcgatcctga ccgacgcccg
      901 cgccctcccc cgcaccgtgt tgcccgcgaa ggatctgtgg gccggcatcg agtcccggct
      961 gccctctgcg cccccggttc cgcttcgtcc ccgtcgtccg ctgctccagc gtcccctggt
     1021 gcagctcgcg gcggccgttt ttctcctcct cgccggggca accttcgcca cgctctacct
     1081 gcgaggccgc acgggttcgc cctcgacgtt cgcgctggag cagcagcgct acaccgccgc
     1141 caccgctgac ctggcccgca agctggccga cgatccggcc ctgctctccg ccaccacccg
     1201 cgccgtggtg gagcgcaatc tcacgatcgt cgaccaggcg attcaggagg ccgagcacgc
     1261 attggcgacc gatcctggca acaccgagct ggagcagatg gtgctggccc gctatgcgca
     1321 acggctggcg ctcctcaagc acgccaccga ggcgggaagg cgggagagct gatgtcgggc
     1381 ggtctggggg tcaggcggtc aggcggtcag gtgttccgcg gccggatgag tttagtggcg
     1441 gcgctcctct gcttgagcat cagccgctcg tcatcggccc aggacgccgt ctcggcgggc
     1501 cgagccgcgg ccagggacgc ggccatccgc atcttcgtcg tgaccggctc cctccgcgtc
     1561 accgcctggg accgcgacag cgtctcggtc aagggccggg tcgaccctgc tgccggccgc
     1621 tttttcctcg gtggcaccca gaacgccctc aagctcggtg tcgaggtgcc agcggggaag
     1681 gaacccgatg gcacctcgga cctcgacgtc aatgttcccg ccggggcccg gctctggatc
     1741 aagtccaccg cggccgatgt cgaagtcacc gcggcgggcg gcgccatcgt ggtgaacggc
     1801 acctcgggcc ggatccgggt cgccggcacc gcgagcgagg
//
LOCUS       DATIFF010001071         1083 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1367912, whole genome shotgun sequence.
ACCESSION   DATIFF010001071 DATIFF010000000
VERSION     DATIFF010001071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1367912"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            230..1009
                     /locus_tag="VLD58_15685"
     CDS             230..1009
                     /locus_tag="VLD58_15685"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSB55803.1"
                     /translation="MTRDRSRYILMLAMLVASPALAAGFDPASTFEVQCSGCHSVGRG
                     VVVGPDLAGVASRHPPEWLHSFIRSSQGMVKKGDEAARTLFGKFAKVMPDHDFTDEQI
                     DSLLKFIASGGPKPPARFRLARTATAAEVARGRALFTGAAPLAHGGPPCSQCHSAGAE
                     SWRGATLAADLTRVYDRYPDAWLTRALLESRYPLMAVYRDQPLTEEEAFVLKAFLYQS
                     SRSRHSQVPADPLSPAVPPFFLGIGGSGLALWLARRGARQR"
BASE COUNT          144 a          383 c          363 g          193 t
ORIGIN      
        1 agggcgagca gggccagagc ccagcgcttc aggacgtgcc tcatagaagc ctccggcaga
       61 aaatccagaa atttcgtcga accagtgctt gactggctca cttttcggtc aaacaagcac
      121 cctcgctaat gggtatggtg ctatgcgcgt gatttagcgg gccaccgtcg acgcggtttc
      181 cccatatttg cctggatctc ttctggagga catcggtatg ggctcgtcta tgacacggga
      241 caggtctcgg tacatcctca tgctcgcgat gctcgtcgcg agcccggccc tcgcggccgg
      301 cttcgatccg gcctcgacct tcgaggtgca atgcagcggt tgccacagcg tgggccgggg
      361 ggtggtggtg gggccggacc tcgcgggggt ggcctcgcgc caccctccgg agtggctcca
      421 ctcgttcatc cgctcgtccc aggggatggt caagaagggg gacgaggccg cccggaccct
      481 gttcgggaag ttcgccaagg tcatgcccga ccacgacttc accgacgagc agatcgactc
      541 cctgctgaaa ttcatcgcgt cgggcggccc caagccgccg gcccgcttcc gcctggcgcg
      601 cacggcgacg gcggccgagg tggcgcgcgg ccgggcgctg ttcaccggcg cggcgccgct
      661 cgcccacggc ggccccccgt gcagccagtg tcacagcgcc ggcgccgaat cctggcgcgg
      721 cgccacgctg gcggcggacc tcacccgggt ctacgaccgc tatccggacg cctggctgac
      781 ccgggcgctc ctggagtccc gctatccgct gatggcggtc taccgcgacc agcctttgac
      841 cgaggaggag gcgttcgtcc tcaaggcctt cctctatcag agctcgcgct cgcggcattc
      901 ccaggtgccg gccgatccgc tctccccggc ggtccctccc ttcttcttgg ggatcggcgg
      961 ctcggggctc gccctctggc tggcccggcg gggggcgcgg cagcgatgat gcgggacctt
     1021 ctcctctacg gtctcttccc ctatctcgcc gtggcgctcc tggtgggcgg cacggcctgg
     1081 cgg
//
LOCUS       DATIFF010001072         1072 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1215552, whole genome shotgun sequence.
ACCESSION   DATIFF010001072 DATIFF010000000
VERSION     DATIFF010001072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1215552"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1072)
                     /locus_tag="VLD58_15690"
     CDS             complement(<1..>1072)
                     /locus_tag="VLD58_15690"
                     /inference="COORDINATES: protein motif:HMM:TIGR00733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HSB55804.1"
                     /translation="KPKELTIRGLVLGALITTGFTAANVYLGLKVGLTFASSIPAAVI
                     SMAVLSAVKDSSILENNIVQTVASAAGTLSAIIFVLPGLVIVGWWTGFPFWQSFLICV
                     SGGVLGVLFTIPLRRALVTTSDLPYPEGVAAAEVLKVGSGTRGEVKDDTGEAREGLIA
                     VILGSIASGGLAILTATRIAAGEVTGYFALGARASSGYNIAWSLALFGAGHLVGLSVG
                     MAMLVGQIIAWVGAVPILTALNPADPGVSLAVHTATVWRTQVRFIGAGTIGVAAIYTL
                     ARLAKPVVAGLVNTLTASRRTASSDDRDRDLSPGWILVLTVVSLVIAGILAFTFARST
                     PLAASAGRLTWVAVPFVLVVGFV"
BASE COUNT          197 a          345 c          394 g          136 t
ORIGIN      
        1 tgacaaaccc caccaccagc acgaacggca cggcgaccca ggtcaggcgg cccgcgctcg
       61 ctgcgagcgg ggtggaccgc gcgaacgtga atgccaggat gccggcgatc accaggctga
      121 ccaccgtcag gaccaggatc caccccggtg agaggtcgcg gtcccgatcg tcgctggaag
      181 cggtgcggcg ggaggccgtg agcgtgttca cgaggcccgc gaccaccggc ttggcgagcc
      241 gggccagcgt gtagatcgcc gcgacgccga tcgtcccggc cccgatgaac cgcacctggg
      301 tccgccagac ggtggcggtg tggacggcga ggctcacgcc cggatcggcg gggttgagag
      361 ccgtgagaat cggcacggcg cctacccagg cgatgatctg gccgacgagc atcgccatgc
      421 cgacggagag cccgaccagg tggcctgcgc cgaacagcgc cagcgaccag gcgatgttgt
      481 atccactgga ggcgcgggcg cccaacgcga aatacccggt cacttcgccg gcggcgatgc
      541 gggtcgcggt gagaatggcg agtccgccgg acgcgatcga gcccaggatg acggcgatga
      601 ggccttcgcg cgcctcgccg gtgtcgtcct tcacttcccc ccgtgtgccg gagccgacct
      661 tcagtacctc ggcggcggcg acgccttcgg gataggggag atcggaggtg gtgaccaggg
      721 cgcgacgcaa cggaatggta aacagcacgc ccagcacccc gccgctcacg cagatcagga
      781 acgactgcca gaaggggaat ccggtccacc agccgacgat caccaggccg gggaggacga
      841 agatgatcgc cgagagcgtg ccggcggccg aggcgacggt ctgcacgatg ttgttctcga
      901 ggatcgacga atccttgacg gcgctgagca ccgccatgga gatcaccgcc gccgggatcg
      961 aggaggcgaa ggtgaggccg accttgagac cgagatagac gttggcggcg gtgaagccgg
     1021 tggtgatcag cgcgccgagg acgaggcccc ggatggtgag ttccttcggt tt
//
LOCUS       DATIFF010001073         1373 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1984194, whole genome shotgun sequence.
ACCESSION   DATIFF010001073 DATIFF010000000
VERSION     DATIFF010001073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1373)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1373
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1984194"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1373
                     /locus_tag="VLD58_15695"
     CDS             <1..>1373
                     /locus_tag="VLD58_15695"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HSB55805.1"
                     /translation="SVFVLNMTTMLGLGVGIDYSLLIVTRFREELNRGLRRQQAAARA
                     LSTAGAAVLTSGLTVVVGFAALLFTPLVETQSVGLGGLVVVSVAVALSTTLLPAILAV
                     LGRQIDRPRWLARRLTWYHAPTAWEKWARSLSRNPKRALAVGGTIVMLLTLPVFWIRV
                     GLPSRNWWPTATEAGQGVQMLEDMGVSNLILPVRVTVEVPAGQSVVSATSLRGLRALS
                     DSLRADPRVAQVRSIVDLEPGNSILQYSILYSNLEDARKQYGAFLDGYLSRDSRVALL
                     DVILSDTTSLTSGMDLSRKARALAAAPPKQLKEAKILVGGYTAASLDLQDVLLKRFPT
                     LVLSILACTGIMLALVFRSVLVPIKAVIMNTLSVSATFGLIVLVFQHGFGGALFGLTG
                     PTSAIFVVVPVLVFAVVFGLSMDYEVFLLSRVKEAFDRTGDNDKATEEGLSATASVIT
                     SAALVMI"
BASE COUNT          193 a          426 c          502 g          252 t
ORIGIN      
        1 gtcggtcttt gtgctcaaca tgacgaccat gctcgggctg ggggtgggga tcgactattc
       61 gctcctcatc gtcacccgct tccgggagga actcaaccgg gggctccgcc ggcagcaggc
      121 ggcggcgcgg gcgctgagca cggcgggggc ggcggtgctg acgtcgggcc tcacggtggt
      181 agtgggattc gcggccctgc tcttcacgcc gctggtggaa acccagagcg tgggattggg
      241 tgggctggtg gtggtgagcg tggcggtggc gctctcgacc acgctgctgc cggcgattct
      301 cgcggtgctg gggaggcaga tcgaccggcc ccgctggctg gcgcggcggc tgacctggta
      361 tcacgcgccg acggcgtggg agaagtgggc ccggagcctg tcgcgcaacc cgaagcgggc
      421 gctggcggtg ggtggcacga tcgtgatgct cctgaccctg ccggtgttct ggatccgggt
      481 agggctgccc tcgcgcaact ggtggcccac cgcgaccgag gcgggtcagg gcgttcagat
      541 gctggaagac atgggcgtct ccaacctgat cctgccggtg cgggtgacgg tcgaggtacc
      601 ggcagggcaa tcggtggtgt ccgcgaccag cctgcgcggg ctccgggccc tctcggattc
      661 gctccgcgcc gatccgcggg tggcgcaggt acggagcatc gtggacctgg agccgggcaa
      721 ctcgattctc cagtactcga tcctctacag caacctggag gatgcccgaa agcagtacgg
      781 cgcgttcctc gatggctatc tgagccgtga cagccgagtg gcgctcctgg atgtgatcct
      841 gagcgacacg acgtcgctca cgtcgggaat ggatctgtcg cgcaaggcgc gggcgctggc
      901 cgcggcaccg ccgaaacagc tcaaggaggc gaagatcctg gtaggcggct acaccgccgc
      961 ctcgctcgac ctccaggacg tactgctcaa gcgcttcccg acgctggtac tctcgatcct
     1021 tgcctgtacc ggcatcatgc tggcgctggt gttccggtcg gtgctggtgc cgatcaaggc
     1081 cgtcatcatg aacaccctct cggtaagtgc cacgttcggg ctcatcgtgc tggtgttcca
     1141 gcacggcttc ggcggggcgc tcttcgggct caccggaccg acctcggcca tcttcgtggt
     1201 ggtgccggta ctggtctttg cggtggtgtt cggcctcagc atggactacg aggtgttcct
     1261 gctctcgcgg gtgaaggagg cgttcgaccg gaccggcgac aacgacaagg ccaccgaaga
     1321 ggggctttcg gccacggcgt cggtcatcac ctcggcggcg ctggtgatga tcc
//
LOCUS       DATIFF010001074         1371 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2291420, whole genome shotgun sequence.
ACCESSION   DATIFF010001074 DATIFF010000000
VERSION     DATIFF010001074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1371
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2291420"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1326)
                     /locus_tag="VLD58_15700"
     CDS             complement(<1..1326)
                     /locus_tag="VLD58_15700"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB55806.1"
                     /translation="MAARLALFEDVCDAVRYAHQSLVVHRDLKPSNILVTQQGQVKLL
                     DFGIAKLLEEGRTAGQGEGQEPPATRTELRMLTPEYAAPEQVRGEPVTTATDVYALGA
                     VLYELLTGQRAHRFERHTPAEVERVVCETEPARPSQVAPAPRRRELSGDLDTIVLKAL
                     EKDPLRRYPSAEALLEDLRRYDGGRPIRARPDSLAYRGRKFIRRHRGGVAVSLVAVVL
                     VCAGVGATLYQARAKGREAAKAREVKDFVVNLFQVADPAESRGREITARELLDRGVRR
                     VDSVLGRQPEVQEELLSVLGTIHRELGLYAQADTLLSRAVEVAKRAYGPDHPEVAARL
                     TDRGTALRELGELAAAESAFQRALDIRRRALGPDHVDVAYTMGELASTLEGEGKYERA
                     ESLSRAVLAIDIRRRGPDHLEGATDLENLGVLVSDRGSLTGADSAYLAAL"
BASE COUNT          203 a          516 c          438 g          214 t
ORIGIN      
        1 gagtgccgcc aggtaggctg agtccgctcc agtcaggctg ccacggtcgc tcaccagcac
       61 accgaggttt tccaggtcgg tggccccctc gaggtggtcc ggtccccggc ggcgaatgtc
      121 gatcgccagc acggcccggg acagcgactc ggcccgctcg tacttgcctt cgccttcgag
      181 cgtgctggcg agctcgccca tcgtgtaggc cacgtcgacg tgatccggcc ccagcgcacg
      241 ccgccggatg tcgagcgcgc gctggaacgc cgactccgcg gccgcgagct cgcccagctc
      301 cctgagcgcg gtacctcggt ccgtcagtcg ggcggccacc tcggggtggt cggggccgta
      361 ggcccgcttg gccacctcga cggcgcgcga gagcagggtg tcggcctgag catacaggcc
      421 cagctcgcgg tggatcgtcc ccaggacgct gagcagctcc tcctgcacct cgggttgccg
      481 tcccagcacc gaatcaaccc gtcgcacacc gcggtcgagg agctcgcggg cggtgatctc
      541 ccggccacgt gactcggccg gatcggcgac ctggaacagg ttcaccacga agtccttcac
      601 ctcccgtgcc ttcgccgcct cgcgcccctt ggcgcgcgcc tggtacaagg tggctccgac
      661 cccagcgcat accagaacca cggcaaccag gctcacggcg acccctcccc gatgccggcg
      721 aatgaacttg cgtccgcgat acgccagcga gtcgggccgg gcacgaatgg gccggccgcc
      781 atcgtagcgg cgaaggtctt cgagcaaggc ctcagccgac ggatagcgtc tcagcggatc
      841 cttctccagc gctttgagca cgatggtgtc gagatcccca ctgagttccc tccgtcgcgg
      901 cgccggtgcc acctgactcg gcctggccgg ctcggtctca cacaccaccc gttccacttc
      961 cgcgggggtg tgccgctcga atcgatgcgc ccgctgcccg gtaagcaatt cgtagagcac
     1021 ggcacccagc gcgtagacgt ccgtggcggt cgtcaccggt tccccgcgca cctgctccgg
     1081 ggccgcgtac tccggggtga gcatgcgcag ttcggtgcgc gtcgcgggcg gctcctgccc
     1141 ctcgccctga ccagccgtcc gcccttcctc caacagcttc gcgatgccga aatcgagcaa
     1201 cttcacctgg ccctgctggg tcaccaggat gttcgagggc ttgagatcgc ggtgcacgac
     1261 caggctctga tgcgcataac ggaccgcgtc gcagacgtcc tcgaacagag ccaggcgagc
     1321 cgccaacgga gtctgccgga tctcacacca ggccaccacc ggctggccgt c
//
LOCUS       DATIFF010001075         1283 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_904971, whole genome shotgun sequence.
ACCESSION   DATIFF010001075 DATIFF010000000
VERSION     DATIFF010001075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1283
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_904971"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            181..>1283
                     /locus_tag="VLD58_15705"
     CDS             181..>1283
                     /locus_tag="VLD58_15705"
                     /inference="COORDINATES: protein motif:HMM:NF018743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1343 domain-containing protein"
                     /protein_id="HSB55807.1"
                     /translation="MALGASSPASRAAQASPIQSGIDRLAAASFQPLAGRSVGLLTNQ
                     TGVDADGRRTIDRLAAAPGMRLRALFSPEHGPNGGFDRPVPNGRDERTDLPVWSLYGS
                     TRRPTPQMLAGLDTIVVDLQDVGVRYYTYLTTLVYVLEEAARHHVSVVVLDRPDPLTG
                     RLVEGPVMDPDLRSFTGPHPVPVRTGLTIGEFARMVVAERGLAVDLTVVPLEGWRRSQ
                     WFDETGLPWVDPSPNIRSVGEALLYAGIGLLEATNVSVGRGTDTPFELVGAPWITDPS
                     ALADSLNGLGLPGVRFEPARFTPTASPYAGEPVGGVRVIVTDREAARPVRLGLALGRI
                     LRQRYHQYRPGAIQDLLVHRQTIWAFLRGDPLG"
BASE COUNT          171 a          467 c          444 g          201 t
ORIGIN      
        1 gtcggccaca cgggctacac gggcaccgcg ctctggctcg accaaccgag cgggatttac
       61 ctcgtcctcc tgacgagccg cgtacatccc gacgatcggg ctcaggtggc cgatctccgc
      121 cgtagcgtga gcggcgccgt cggggctctg gtgtttggcc gggacgcgcc gtcggcgccg
      181 atggcgctcg gggcttccag ccccgcctcc cgagccgccc aggcgtcgcc gatccagagc
      241 gggattgacc ggctggcggc ggctagcttt cagcccctgg cggggcggtc cgtcggcctc
      301 ctcacgaacc agaccggggt cgatgcggat gggcgccgga cgatcgatcg cctcgcggca
      361 gcgccgggca tgcggctacg agcgctgttc agccccgaac acgggccgaa tggtggattc
      421 gaccgcccag tcccaaacgg gcgcgatgag aggaccgacc tccccgtatg gagcctctat
      481 gggtcgacac ggcgacccac cccccagatg ctcgccggac tcgacacgat cgtcgtcgac
      541 ctccaggacg tcggtgtccg ctactacacc tacctgacga cgctggttta cgtcctggag
      601 gaggccgccc gacaccacgt gtcggtggtc gtgctggatc gcccggatcc cctcaccggg
      661 cgcctcgtcg agggtcccgt gatggatcca gatctgcgct cgttcacggg cccccatccc
      721 gtgcccgtcc gaaccggttt gacgatcggg gagttcgccc gcatggtcgt tgccgagcgc
      781 gggctggccg tcgacctcac cgtggtgccg ctcgagggct ggcgccgcag ccagtggttc
      841 gacgagacgg ggctcccctg ggtcgacccg tcgccgaaca tccgatcggt tggcgaggca
      901 ctcctctacg ccgggatcgg gctgctcgag gcgacgaacg tgtcggtcgg tcgcggaacc
      961 gacaccccgt tcgagctggt cggagcgccc tggatcaccg acccctcggc gctggctgac
     1021 agcctcaacg ggctggggct cccgggcgtg cgcttcgaac cggctcggtt cacgcccact
     1081 gcgagccctt acgctggcga gcccgtcggc ggggtccgcg tgatcgtgac cgaccgggag
     1141 gccgccaggc cggtccgcct gggcctggcc ctggggcgga tcctgcgcca gcgctatcac
     1201 cagtaccggc ctggcgcgat ccaggacctg ctggtgcacc gccagaccat ctgggccttc
     1261 ctacggggcg atcccctggg gag
//
LOCUS       DATIFF010001076         1815 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2137810, whole genome shotgun sequence.
ACCESSION   DATIFF010001076 DATIFF010000000
VERSION     DATIFF010001076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2137810"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..1408)
                     /gene="sufD"
                     /locus_tag="VLD58_15710"
     CDS             complement(104..1408)
                     /gene="sufD"
                     /locus_tag="VLD58_15710"
                     /inference="COORDINATES: protein motif:HMM:TIGR01981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HSB55808.1"
                     /translation="MTTAYLQDFERSLAVAPRAGWLEELRRLGREHFGRTGIPTSRDE
                     DWRFNNLAPLAGADFRLAPADAAVRVEEIRPFLAPLPNASTLVFVNGRYVPGLSSICD
                     RDTGVTVSSLNAAFATHGDLVRRHLAQYDLPARGGFSSLNTAFIHDGLFVHVAAGADA
                     GAPIHAVFVTSARGEGAATHLRNLILIDAGARASVIESYIGLTGGSYLTTAVTEAVVA
                     PGAFLEHTKIQRESEQAYHIGTTHLHQDRESRSESFSVSFGAALCRNNLDMVLDGPDV
                     NSQLFGMYMGRGRQELDNHTSILHAHPNCGTREVYKGILDDRSHGIFNGKIYVTPEAQ
                     KTDAKQTNRALLLSDTARIDTKPQLEIFADDVKCTHGATVGSLDPLALFYLKSRGVGA
                     AQARKILTYAFAAEVLEEIPHEPIRRQLESLVMSRLENLGQG"
BASE COUNT          270 a          593 c          653 g          299 t
ORIGIN      
        1 aggtagacca ggggctggcc ctggatcagg gtccggagaa ccgggaattc gcgccggatc
       61 tgcacgacgt cgaacgaggt cccgatcgcc ggtgttgccg tcatcagccc tgccccaggt
      121 tttccagccg gctcatcacc agcgactcga gctgccggcg gatcggctcg tggggaatct
      181 cttccagcac ttcggccgcg aaggcatagg tcaggatctt ccgggcctgc gcggcgccca
      241 ccccgcggct cttgaggtag aacagcgcca gcggatcgag gctccccacg gttgcgccat
      301 gggtgcactt cacgtcgtcg gcgaagatct cgagctgcgg cttggtgtcg atccgtgccg
      361 tatccgagag cagcagagcg cggttggtct gcttggcgtc ggtcttctgc gcctcggggg
      421 tcacgtagat cttgccattg aagatcccgt gagaccggtc atccaggatg cccttgtaga
      481 cctcacgggt cccgcagttg gggtgagcgt ggaggatgga cgtgtgattg tccagctcct
      541 gcctgccgcg ccccatgtac atgccgaaga gctggctgtt cacgtcgggc ccgtccagca
      601 ccatgtccag gttgttgcgg cagagggccg ccccgaagct gacggagaac gactcgctcc
      661 ggctctcgcg atcctggtgc aggtgggtgg tgccgatgtg gtaggcctgc tcgctctcgc
      721 gctggatctt ggtgtgctcc aggaacgccc ccggcgcaac caccgcttcg gttaccgcgg
      781 tggtgagata ggagccgccg gtcaggccga tgtagctctc gatcacggac gcgcgcgcgc
      841 cggcatcgat caggatcagg ttgcggaggt gggtcgcggc cccttcgccc cgggcgctgg
      901 tcacgaacac cgcgtggatc ggcgcgccgg catcggcgcc ggccgccaca tggacaaata
      961 gcccgtcatg tatgaaggcg gtgttcagcg aggagaagcc tccccttgcg ggcaggtcgt
     1021 actgcgcgag gtgccgccgg accaggtcgc cgtgggtggc aaaggcggcg ttcaggctgg
     1081 acaccgtgac tccggtgtcg cggtcgcaga tggaagaaag gccggggacg tagcggccgt
     1141 tcacgaagac cagggtgctc gcgttcggga gcggggccag gaacggacgg atctcctcga
     1201 cccgtacggc cgcgtcggcc ggtgccagcc ggaagtcggc accggcaagc ggcgccaggt
     1261 tgttgaagcg ccagtcctcg tcccggctgg tcgggatccc ggtacgcccg aagtgctccc
     1321 ggccaaggcg ccggagttct tccagccagc cggcccgcgg cgcgaccgcg agggagcgct
     1381 cgaaatcctg caggtacgcg gtggtcacgc cgacaccgcc ggctcggtga gccattcgta
     1441 gcccttggcc tcgagctcga gcgcgagttc cttgcccccg ggagaggcgg caggtaggag
     1501 cgcaggtcct cgaggcggac ggtcggatcg accggggcca gtcggtagtc ggcaccggcc
     1561 agcggggcca ggttgttgaa gcgccagtcc tcgtcccggt tggtggggat gccggagcgc
     1621 ccgaagtgct cccggcccaa gcggcggagc tcctccagcc agccggcccg cggcgcgacc
     1681 gcgagcgagt gctcgaagtc ctgcaggtac gcggtggtca cgccgacacc gccggctcgg
     1741 tgagccactc gtagcccttg gcctcgagct cgagcgcgag ttccttgccc ccggacttga
     1801 tgatgcgccc gcccg
//
LOCUS       DATIFF010001077         2648 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1215959, whole genome shotgun sequence.
ACCESSION   DATIFF010001077 DATIFF010000000
VERSION     DATIFF010001077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2648
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1215959"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            157..939
                     /locus_tag="VLD58_15715"
     CDS             157..939
                     /locus_tag="VLD58_15715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55809.1"
                     /translation="MSKQQMSRLVAAMALAAMAAGCGNSTGTDGTGSGGRIRAQVVTA
                     TGDLTTSLTQFRGLLGDPANTTPGEQPTGRREINWDGVGAALLNVNNFPGDQFNRVVP
                     RGQIFTTPGTGFRVSDNALFDLEPSDSTQFSAFSPIKTFVPIGSPIVDVKFRVAGSDT
                     PAVVTGFGVVFSDVDRNTSASIEYFRPDGRTLGKIFAPVRSDARGHSFAGVVFDTAVV
                     ARVRIVAGDASVAAGRKDVSAGGTDDLVDTDDFIAGEPHPIP"
     gene            1023..1649
                     /locus_tag="VLD58_15720"
     CDS             1023..1649
                     /locus_tag="VLD58_15720"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HSB55810.1"
                     /translation="MRHTIWRASRGLAQLSGLIGLLAGLAPDRALSQEPILAGTVLSG
                     TLSFDGHATVGDFTGTTTAVTGEISGGSALASVRGWVEAPVRSLATGKGKRDADLNKS
                     MESDKYPVIRYELDSITPESSVDGEAKVILHGRFLIHGVTREADLPARVQVGSSGARV
                     WAETPLSLKDYHIGGLSKMLGILKMHDEIQVHVDVTFAMTPTTPGEGE"
     gene            1730..>2648
                     /locus_tag="VLD58_15725"
     CDS             1730..>2648
                     /locus_tag="VLD58_15725"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSB55811.1"
                     /translation="MLLLIAALTVALAAAVLLLLRAPRHVAPPDDRDSHLDQMFETFP
                     HALVLRDVEGRLLRANAEFTRLFQYSVPEVMGVNIDRLLGLPRDERHVNVERMLTSVN
                     KVWRQTRRRRRDGSPVEVSHTGAPLTRAGQAVGFYEVFHDLTPQLRAEATITSQQRLL
                     EAFFAQSLDGFFFMMLDEPIRWADDVDKEALLDYAFAHHRVTRVNDAMLTQYGFTREQ
                     MLGRTPGDLYAHDIPAGRAAWRRFFDAGRLHAVTNERRADGTPVLIEGDYVCLYDDNG
                     MLTGHFGIQRDITERSRQEEALRESEEKFA"
BASE COUNT          432 a          905 c          906 g          405 t
ORIGIN      
        1 gaactggccg tcagccgcat cccgatccaa cgggggagca tcgccgccta gcttggctcc
       61 caggtcgggc gagtatcggc gaagcgctcg atgatcacgg cggggagcag gcgggcggaa
      121 cgctcgccac cagccgccca cactccggga gcaggcatgt ccaagcagca gatgagcagg
      181 ttggtcgcag caatggccct ggccgcgatg gcggcaggat gcggaaacag caccggcacc
      241 gacgggaccg gctcgggcgg caggatccgg gcgcaggtcg tgacggcgac cggtgacctc
      301 accacctccc tgacccagtt ccgcgggctg ctgggcgatc ccgccaacac gactcccggc
      361 gagcagccga ccggccgacg cgaaatcaat tgggacggcg tcggcgcagc tctgctcaac
      421 gtgaacaatt tccccggcga ccagttcaac cgggtggtgc cgcgcggtca gatcttcacc
      481 acgccgggaa ccggcttccg ggtaagcgac aacgcgctgt tcgacctgga gcccagcgat
      541 tcgacccagt tctcggcctt cagcccgatc aagaccttcg tcccgatcgg cagcccgatc
      601 gtggacgtga agtttcgggt cgccgggagc gacacgccgg cggtggtcac cggcttcggc
      661 gtggtcttct cggatgtgga ccggaatacc agcgcttcca tcgagtactt ccgccccgat
      721 ggccgcacgc tcgggaagat ctttgcgccg gtgcgatcgg acgcccgggg gcattccttc
      781 gctggggtgg tcttcgatac ggcggtggtc gcgcgggtgc ggatcgttgc cggcgacgcg
      841 tcggtagcgg cggggcggaa ggacgtcagc gccggcggca ccgatgacct ggtcgatacc
      901 gacgatttca tcgcgggcga gccgcatccc attccgtaac cgggttccgg tggcgcggat
      961 tgcgcggaga cttcactccg cgagaccgcg ccaccgcctc atactcaggc aggagaaggc
     1021 gtatgcgaca cacaatctgg cgcgccagtc gcgggttggc gcagctctcc gggctgatcg
     1081 gcctgctcgc cggcctggcg ccggaccgcg ccctcagcca ggagccgatt ctcgcgggaa
     1141 cggtcctgtc cggaacgctc agcttcgacg gccacgccac cgtgggcgac ttcaccggca
     1201 ccacgacggc cgtgaccggc gagatttccg gcgggtcagc gctcgcgtcg gtgcggggtt
     1261 gggtggaggc ccccgtccga tcgcttgcta ccgggaaggg gaaacgggac gccgacctca
     1321 acaagtcgat ggagtccgac aagtacccgg tcatccgcta cgaactggac agcatcacgc
     1381 cggaatcctc cgtcgacggc gaagccaagg tcatcctcca cggccggttc ctgatccatg
     1441 gcgtgacccg ggaggccgac ctccccgcca gggtccaggt ggggagcagc ggggctcggg
     1501 tctgggccga gacgccgctc agcctcaagg actaccacat cggcggcctg agcaagatgc
     1561 tcggcatcct caagatgcac gatgagatcc aggtccacgt ggacgtcacc ttcgccatga
     1621 cgccgacgac gccgggcgag ggggagtaag gcgcctccgc gccgctgtgc gttgacctgg
     1681 cagcgccgga ccggtaccct gcatccatct ccgcctggga aagccggcca tgctcctgct
     1741 gattgccgcc ctgaccgtgg cgctggccgc ggcggtgctc ctgctcctcc gcgccccgcg
     1801 ccacgtcgcg ccgcccgacg atcgcgactc ccacctcgac cagatgttcg agaccttccc
     1861 ccacgccctg gtcctgcggg acgtggaggg aaggctgctt cgcgccaacg ccgagttcac
     1921 ccggctgttt cagtattcgg tgccggaggt gatgggggtc aacattgacc gcctgctggg
     1981 tctcccgcgg gacgagcggc acgtcaacgt cgagcggatg ctcacctcgg tcaacaaggt
     2041 ctggcgacag acccggcggc gtcgccgcga cggctcgccg gtggaggtat cgcacaccgg
     2101 agcaccgctc acccgggctg gacaggcggt gggcttctac gaggtgttcc acgatctcac
     2161 cccgcagctt cgggcggagg ccaccatcac gtcgcagcag cggctgctgg aggcgttctt
     2221 cgcccagtcg ctggacggct tcttcttcat gatgctggac gagccgatcc gctgggcgga
     2281 cgacgtcgac aaggaggcgc tgctcgacta cgccttcgcc catcatcgcg tgacccgggt
     2341 gaacgatgcg atgctgaccc agtacgggtt cacgcgggag cagatgctgg gccggacacc
     2401 gggtgacctg tacgctcacg atattcccgc gggccgggcg gcctggcgcc ggttcttcga
     2461 cgcgggccgg ctgcacgcgg tgaccaacga gcgccgggcg gacggcaccc cggtcctcat
     2521 cgagggcgac tacgtctgtc tgtacgacga caacgggatg ctcaccggcc atttcggcat
     2581 ccagcgggac attaccgagc gcagccgcca ggaggaggcg ctgcgggaat cggaagagaa
     2641 gttcgcca
//
LOCUS       DATIFF010001078         1512 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1675381, whole genome shotgun sequence.
ACCESSION   DATIFF010001078 DATIFF010000000
VERSION     DATIFF010001078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1675381"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(165..1118)
                     /locus_tag="VLD58_15730"
     CDS             complement(165..1118)
                     /locus_tag="VLD58_15730"
                     /inference="COORDINATES: protein motif:HMM:NF033542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HSB55812.1"
                     /translation="MNATPIFVGIDISKAYLDTALRPGPPVARHTNDPAGIAALVARL
                     QPLSPALVVVEATGGLELPLVAALQVAKIPVAAINPRQARDFAKALGRLAKTDRIDAE
                     VLAHFAEAVRPAARPLPSAEVQALDALLSRRQQLLEMRVMESNRLGTCSDPTVRTGLE
                     RHLAWLATEVADADRLLSEAVKASPAWREKDELLRSIPGLGPVTSLTLLAALPELGSL
                     DGGKLSALVGLAPFADDSGTRRGGRHVRGGRAVVRRVLYLAALSATRHNPALSAFRVR
                     LAVRGKKAKVILTAVARKLLVIANAVIRTGRHWDPELALTR"
     gene            complement(1287..1490)
                     /locus_tag="VLD58_15735"
     CDS             complement(1287..1490)
                     /locus_tag="VLD58_15735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55813.1"
                     /translation="MLCDPGRGRSLMLSEAEARARILKRAELGEAIEFPLPEALGLVL
                     AEPAVADVNMPLVCFLQPLPKRP"
BASE COUNT          235 a          528 c          530 g          219 t
ORIGIN      
        1 ggcgccccgc gaccgatctg ggggacgagt cgcgcgcggc gcccgatcgt acctgatgga
       61 gggcccctgc gcacgctcct ggacaatccg gctcaggaaa aagcgactgt gttccgagtc
      121 aaggcccgag ggcccgtttg agcgcagaaa tcgcccggtg atcctcagcg tgtcagcgcc
      181 agctctggat cccagtggcg gccggtccgg atgaccgcat tggcgatgac cagcagcttg
      241 cgggcgacgg ccgtcaggat caccttcgcc ttcttgcccc gcaccgccag ccggacccgg
      301 aaggcgctca gggccgggtt gtgccgcgtc gccgacagcg ccgccaggta cagcacccga
      361 cgcaccaccg cccgaccgcc ccggacatgc cggccaccgc gacgcgtgcc gctgtcatcg
      421 gcgaagggag ccaggcccac cagggccgag agcttgcccc cgtcgaggct ccccaactcc
      481 ggcagcgccg ccagcagtgt caggctggtg accggcccta acccggggat gctccgcaac
      541 agctcgtcct tctcccgcca ggccgggctg gccttgaccg cctcgctcag gagccggtcc
      601 gcatcggcga cctcggtcgc cagccaggcc aggtgacgct ccaggccagt ccgcaccgtc
      661 gggtcggagc aggtgcccag gcggttggac tccatgaccc gcatctccag caactgctgg
      721 cggcgggaca gcagggcatc caatgcctgc acctcggccg agggcaacgg ccgcgcagcg
      781 gggcggacgg cctcggcgaa gtgggccagg acctcggcgt cgatgcgatc ggtcttagcc
      841 agccggccca gcgccttggc gaagtcgcgg gcctggcggg gattgatcgc ggcgaccggg
      901 attttggcga cctgcagcgc ggcgaccagg ggcagttcca atcccccggt ggcctcgacg
      961 acgaccaggg ccgggctcag gggctggagc cgggcgacca aggcggcgat gccggccgga
     1021 tcgttggtgt ggcgggccac cggcgggccg ggtcggaggg ccgtgtcgag gtaggccttg
     1081 gagatatcga tgccaacgaa gatcggagta gcattcatgg gtgttcaatc aggaggcaat
     1141 cccggcgtat ccccgtcctt gttatgcggc cttggaggcc aggtgactgt tcgggttccg
     1201 gtcgggagag gatgagggtg gcgacccgcg cttttttacg gcctcgaggg ccagtggggc
     1261 gacggcctac cacccctatc tccatgttat ggccgcttgg gaagcggctg taggaaacat
     1321 acaaggggca tgttcacgtc ggcgacggcc ggctcggcca ggactaggcc gagcgcctcg
     1381 ggcaggggga actcgatcgc ttcgccgagc tcggcccgct tcagaatccg cgctcgcgcc
     1441 tcggcctccg acagcatcag gctccgcccc ctccctggat cacacagcac cgcgcctcaa
     1501 tgcggctccc ac
//
LOCUS       DATIFF010001079         2116 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_138091, whole genome shotgun sequence.
ACCESSION   DATIFF010001079 DATIFF010000000
VERSION     DATIFF010001079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2116
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138091"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..259)
                     /locus_tag="VLD58_15740"
     CDS             complement(<1..259)
                     /locus_tag="VLD58_15740"
                     /inference="COORDINATES: protein motif:HMM:NF014077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HSB55814.1"
                     /translation="MHILVSNDDGILAPGLALLAEVCQRVGQVTVVAPDREQSGTSHS
                     LTMHRPVRPSVRPDGSYQVDGTPTDCVLLALGVLMPERPAFV"
     gene            complement(342..722)
                     /locus_tag="VLD58_15745"
     CDS             complement(342..722)
                     /locus_tag="VLD58_15745"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HSB55815.1"
                     /translation="MARPVQEFFSIGEVCALTDLKPHVLRYWESQFRFLNPAKNRSGN
                     RVYKSREVELIMLVKHLLYTEKYTIEGARQRIEHYRRTGELRGAARAATERETLRELR
                     EAIEEIVLILDGKVPPPRPEPTTE"
     gene            complement(725..1723)
                     /locus_tag="VLD58_15750"
     CDS             complement(725..1723)
                     /locus_tag="VLD58_15750"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HSB55816.1"
                     /translation="MTTVGVLGAGSWGTTLADLLARRGHRVRLWAYEPEVVDAINARH
                     ENPLFLPGCPLAESLTATGDAGAAVADAAVVLTVAPSHVFRRVVQAAQPSIAGDALLV
                     TATKGIEPDTLHLMSEVLEEAAPGHPVTALSGPSFALEVYQQQPTAVVAAARDEHTAR
                     AVQEVFATPRFRVYSHTDVVGVELAGALKNVIAIAAGALEGLGLGNNPRAALITRGLA
                     EMTRLGVAMGADPLTFAGLAGMGDLILTTTGQLSRNRALGVALARGETLAEYTRTHRT
                     VAEGVNTARAALALAARVKVELPICDQVARILFDGKPATQAVGDLMERALKSEQWR"
     gene            complement(1720..>2116)
                     /locus_tag="VLD58_15755"
     CDS             complement(1720..>2116)
                     /locus_tag="VLD58_15755"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043772 - acyl-phosphate
                     glycerol-3-phosphate acyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycerol-3-phosphate acyltransferase"
                     /protein_id="HSB55817.1"
                     /translation="VPYFPVWCGILAVVGHVFSVFVGFKGGKGVATAAGMIIGLAPLA
                     FPVVLVVWALIVWLTGYVSLGSIVAAVLFPVADWLLHPARRTLVALGIDVALAGFIVW
                     KHRANIQRLFAGTENRFGRRGRKPAAPHA"
BASE COUNT          335 a          751 c          717 g          313 t
ORIGIN      
        1 agacgaaggc gggacgctcc ggcatcagga ccccaagcgc caggagcacg caatccgtcg
       61 gcgtgccgtc aacctggtac gacccgtcgg gacggacgga cggccggacg ggccggtgca
      121 tggtaaggct gtgcgaagtg ccgctctgct cgcggtccgg cgccaccacg gtcacctgcc
      181 ctacccgctg gcacacttcg gccagcaggg ccaggccggg tgccaggatc ccgtcgtcgt
      241 tggaaaccag gatgtgcatg gaggcacaaa gataacaccg cgggctgggc cgctgtgcca
      301 tcagcccggc gccgaccgtc cgcccagggc cggttgggtc gctattccgt cgtgggttcc
      361 gggcggggtg gcgggacctt tccatcgagg atgagcacga tctcctcgat ggcctcgcgg
      421 agttcccgca gggtttcccg ctcggtcgcc gcgcgggcgg ccccgcggag ctctcccgtg
      481 cgccggtagt gttcgatccg ctggcgcgcg ccttcgatgg tgtacttctc ggtgtacagg
      541 aggtgcttga cgagcatgat cagctcgact tcgcggctct tgtacacccg gttgcccgag
      601 cggttcttgg ccggattgag gaagcggaac tggctctccc agtaccggag cacatgcggc
      661 ttcagatcgg tgagggcgca gacctcccca atcgagaaga actcctggac cggccgggcc
      721 atggtcaccg ccactgctcc gacttgaggg ctcgttccat caggtcgcct accgcctggg
      781 tcgccggttt gccgtcgaac aggatgcggg ccacctggtc gcagatcggc agctcgacct
      841 tgacccgtgc ggccagtgcg agcgcggccc gggcagtatt gaccccttcc gccaccgtcc
      901 ggtgagtacg ggtgtactcc gccagcgtct ccccccgggc aagggcgacg cccagggcgc
      961 ggtttcggct gagctggccg gtggtggtaa ggatcaggtc gcccattccg gcaaggccgg
     1021 caaaggtcag cgggtccgcc cccatggcca ctccaagcct ggtcatttcg gccaggccac
     1081 gagtaatgag ggcggcccgt ggattgttgc cgagccccag tccttccagg gcgccggcgg
     1141 cgatcgcgat cacgttcttg agggcgcccg ccagttcgac gcctaccacg tcggtatggg
     1201 agtacacccg gaaccggggc gtcgcgaaga cctcctgcac cgcccgggcc gtatgctcgt
     1261 cccgcgccgc agcgaccacg gccgtgggtt gctgctggta gacctccagc gcgaagctcg
     1321 gtccggacag cgcagtcacg gggtggccgg gtgccgcctc ttccagcacc tccgacatga
     1381 ggtggagcgt gtccggctcg atacccttcg tcgcggtgac caggagcgcg tcccccgcga
     1441 tgctgggctg cgccgcctgc acaacccgcc ggaacacgtg gctcggggca acggtgagca
     1501 ccaccgccgc atcggccacc gccgcgccgg catcgcccgt ggcggtgagc gactcggcca
     1561 gcgggcaccc tggcagaaac agcgggttct cgtggcgggc attgatcgcg tccaccactt
     1621 caggctcata ggcccagagc ctcaccctgt ggccgcgacg ggccaggagg tccgccaggg
     1681 tagttcccca gctccccgca ccgagcacgc cgacggtcgt catgcgtggg gtgccgcggg
     1741 cttccggccc cgccgcccga agcggttctc cgtgcccgcg aacaggcgct ggatgttggc
     1801 ccggtgcttc cagacgatga agcccgccag cgccacatcg atgcccaggg cgaccagcgt
     1861 gcgccgcgcc gggtgcagca accagtcggc caccggaaag agcacggcgg ccacgatcga
     1921 gccgagcgac acgtagcccg tgagccagac gatcagcgcc cagactacca gcaccaccgg
     1981 aaaggcgagc ggggccagtc cgatgatcat ccctgccgcc gtggccacac ccttcccgcc
     2041 cttgaagccg acaaacaccg agaagacatg cccgaccacc gcgaggatgc cgcaccacac
     2101 cgggaagtac ggcacg
//
LOCUS       DATIFF010001080         2267 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1829726, whole genome shotgun sequence.
ACCESSION   DATIFF010001080 DATIFF010000000
VERSION     DATIFF010001080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2267
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1829726"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..330
                     /locus_tag="VLD58_15760"
     CDS             <1..330
                     /locus_tag="VLD58_15760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55818.1"
                     /translation="IARMGRYWGTSKGPAAIVNQPADFRQRLTVTQSYLRNSPFRIIR
                     MDPVPNDADRMTVTVDLDRHDPGGQSCVRQVPFTVVKTGKYGWIVSAIDLNVAGAPSR
                     PCSQRGT"
     gene            complement(337..732)
                     /gene="mce"
                     /locus_tag="VLD58_15765"
     CDS             complement(337..732)
                     /gene="mce"
                     /locus_tag="VLD58_15765"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HSB55819.1"
                     /translation="MTDRPTIAHIGVAVESIEAALPFYRDVLGLTPGHAEEADGARIV
                     SLPFGASEVELLEPKSAESPIAKFLAKRGPGIHHVCYRVPDLDQALAACVAAGYRLVD
                     QVPRTGAGGHRIAFIHPRSTAGILIELTE"
     gene            822..1160
                     /gene="trxA"
                     /locus_tag="VLD58_15770"
     CDS             822..1160
                     /gene="trxA"
                     /locus_tag="VLD58_15770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HSB55820.1"
                     /translation="MASQHIINVTDASFSNEIEQLKGLALVDFWAVWCGPCQAIAPVV
                     DQLAEQYAGKLKVAKLDTDANQNTAVRFNVRSIPTIMFFKDGRHVDTVIGADPRIKTI
                     LEGKIQQHLS"
     gene            1264..2100
                     /gene="rsmI"
                     /locus_tag="VLD58_15775"
     CDS             1264..2100
                     /gene="rsmI"
                     /locus_tag="VLD58_15775"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: protein motif:HMM:TIGR00096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HSB55821.1"
                     /translation="MPPATLFVIATPIGNLGDLSHRAEETLRTVPVVAAEDTRRVRGL
                     LSHLDAHPLVLSFHAHSPQKRQEALLEILGDGRDVALVTDAGTPGVSDPGETLVAAVR
                     AAGFGVVPIPGPSAVSTALSASGLSADRYLFLGFLPRKGRERDRLLKMVAECEWTVVL
                     YEAPPRLAELLSDLAEVAGPGREAVVCRELTKMYEEFRPGTVAELAAYYGEMPPRGEI
                     TVVVAGRPEGAVAAAPVIDIPARAAELLASGLSRKDAVQQLVADTGVARNEAYRIVTS
                     LP"
BASE COUNT          379 a          739 c          771 g          378 t
ORIGIN      
        1 atcgcaagaa tggggcggta ttggggaacg tcgaagggac cggccgcgat cgtcaaccag
       61 ccggccgact ttcggcagcg gctcacggtc acccaatcct acctgcgcaa ctcgccgttc
      121 cgcatcatcc ggatggatcc ggtaccgaac gacgccgacc ggatgactgt cacggtcgat
      181 ctcgaccgcc acgatcccgg cggtcagagc tgcgtacgtc aggtgccctt cacggtggtg
      241 aaaaccggga agtacgggtg gatcgtctcg gcgatcgatc tgaatgtggc gggagcgcca
      301 tcccggccct gttcgcagcg cggcacctga gcccggctac tccgtcagct cgatcaggat
      361 gccggcggtg ctcctggggt gtatgaaggc gatgcgatgg ccgccggcac cggtgcgggg
      421 cacctggtcc accaggcggt acccggcggc gacgcaggcg gcgagcgcct gatccaggtc
      481 gggcacgcgg tagcagacat gatgtatgcc ggggccgcgc ttggccagga acttcgcgat
      541 ggggctctcg gcgctcttcg gttcgagcag ctcgacctcg gacgcgccaa atggcaggga
      601 gacgatgcga gcgccgtcgg cctcttccgc atgtcccggc gtcaggccga ggacgtcgcg
      661 gtagaacggc agggcggcct cgatgctttc gacggctacg ccgatatgtg caatggtagg
      721 gcggtcggtc acggtcggcc gctgcgagtg agtgtgaatt tgagcccggg cggggacctg
      781 cgcctcgccg acacaaagta agcggaaagg atcaggagcg catggccagc cagcacatca
      841 tcaatgttac agatgcttcc ttcagcaacg agatcgagca gctcaagggc ctcgccctcg
      901 tggacttctg ggccgtgtgg tgcgggccct gtcaggccat cgcgccggtg gtcgaccagc
      961 tggccgagca gtacgccggc aagctcaagg tggccaaact cgacaccgac gccaaccaga
     1021 acaccgcggt gcggttcaat gtccgctcga ttccgactat catgtttttc aaggatggcc
     1081 ggcatgtcga cacggtgatc ggcgccgatc cccggatcaa gacgatcctc gaagggaaga
     1141 tccagcagca tctgtcgtag aagtgagaag gaagaagtga gaagtgagaa gtggcgattc
     1201 gccgccttct tacttctcac ttctcactcc tttcacctcg gctctcccgc agtacctttc
     1261 ggcatgcccc ccgccacgct cttcgtcatc gccacgccca tcgggaatct gggcgacctt
     1321 tcccaccggg ccgaagagac gctgcgcacc gtgccggtgg tggccgccga agacacccgc
     1381 cgggtccgcg gactcctctc ccatctcgat gctcacccgc tggtcctgag ctttcacgcc
     1441 cattcacccc agaagcggca ggaagcgctg ctcgagatcc tgggcgatgg gcgcgatgtg
     1501 gcgctggtga ccgatgccgg cacgcccggg gtcagcgatc cgggtgagac cctggtcgcc
     1561 gcggtgcgcg cggcgggatt cggggtcgtc cccatcccag gcccctcggc ggtgagcacc
     1621 gccctttccg cgtccggcct gtcggcggac cgctacctct ttctgggatt cctccctcgc
     1681 aaggggcggg agcgcgaccg gctgctcaag atggtggcag agtgtgagtg gaccgtcgta
     1741 ctgtacgagg ccccgccccg gctcgccgag ctgttgagcg atctggcgga ggtggccggt
     1801 ccggggcggg aggcggtggt atgccgggag ctgaccaaga tgtatgagga attccgcccc
     1861 ggaactgtgg cagaactggc cgcgtactac ggagagatgc ctccgcgagg cgagattacc
     1921 gtggttgtcg cggggcgccc cgaaggtgca gtcgccgccg cgccggtcat cgacatcccg
     1981 gcccgggcgg cggaacttct cgccagcggc ctctcccgga aggacgcggt gcagcagctg
     2041 gtggctgaca ccggcgtcgc ccgcaacgaa gcgtaccgga tcgtcacgtc cctgccatga
     2101 acctgcgccg ccggatcctc gctggaacga tgctgctctc gctgctgagc ggcagcagcg
     2161 ccgcggccca gttgcggacc gcgtcggatc gggaccgggc ggtcaccacc atgacgatcg
     2221 gccggctgca ctatgatggt gggggcgact ggtacgccaa cccatcg
//
LOCUS       DATIFF010001081        13991 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1523614, whole genome shotgun sequence.
ACCESSION   DATIFF010001081 DATIFF010000000
VERSION     DATIFF010001081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 13991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13991
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1523614"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..204
                     /locus_tag="VLD58_15780"
     CDS             <1..204
                     /locus_tag="VLD58_15780"
                     /inference="COORDINATES: protein motif:HMM:NF016165.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin receptor-like dimerization
                     domain-containing protein"
                     /protein_id="HSB55822.1"
                     /translation="RPWYRHLIYAPGFYTGYGVKTLPGIREAIEQKDYNLAGREIVRA
                     AEVLGAEAALVSQAAEALSAAAK"
     gene            complement(211..1236)
                     /locus_tag="VLD58_15785"
     CDS             complement(211..1236)
                     /locus_tag="VLD58_15785"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSB55823.1"
                     /translation="MECPTTEPELEELLSRPTAGLLETLATVPGDILILGAGGKMGPS
                     LAMMARRALVALGRPDRVIAVSRFSEPGLAERLAAAGVEVRQADLLHPAALGSLPDAP
                     NLVFMAGQKFGTHGNPATTWAMNAALPAFVAERYAGARTVVFSTGNVYPLWPVGSGGP
                     TEDSSVGPIGEYAMSCLARERIFQHYALTRGTRALIFRLNYAVELRYGVLVDTGRRVL
                     HGEAVPLTMGHVNLIWQGDANARALQCLAHTTSPATVLNVTGPEQLSIRWIAEQFGRY
                     FGRTPLFEGTEAPDALLSNARRSVELFGPPAVPPDRVIEWTAAWLERGGRLLGKPTHF
                     EERKGRF"
     gene            complement(1360..2646)
                     /locus_tag="VLD58_15790"
     CDS             complement(1360..2646)
                     /locus_tag="VLD58_15790"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HSB55824.1"
                     /translation="MSKDSLTITDNRTGKSYEIPVTEGTIKAMDLRQIKTADDDFGLM
                     TYDPAFLNTASCRSAITFIDGDKGILRYRGYPIEQLAEKASFLETAYLLFEGELPTRA
                     QLDTWEEEVRYHTYVHTNVIKFLEGFRYDAHPMGMLLGAVGALSTFYPDAKHIEDPKS
                     RHLQRVRLIAKIPTIAAFAFRHSRGLPYVFPRNDLSYIGNYVNMTFEIGGKHEPNPVL
                     QRALEILLILHADHEQNCSTSAVRSVGSSHVDPFSAVSAGIAALYGPLHGGANEAVLT
                     MLDHIDDKKNIPAFIKEVKEGGDRLMGFGHRVYKSYDPRAKLIKKVAYDVFEQTGLNP
                     KLEIALELEKIALQDEYFIKRKLYPNVDFYSGLIYQAMGYPTDYFTVLFALGRLPGWV
                     AQWEEMLRDKDQKISRPRQIFIGHPEREFVPMAMRG"
     gene            complement(2754..4130)
                     /locus_tag="VLD58_15795"
     CDS             complement(2754..4130)
                     /locus_tag="VLD58_15795"
                     /inference="COORDINATES: protein motif:HMM:NF017835.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AcvB/VirJ family lysyl-phosphatidylglycerol
                     hydrolase"
                     /protein_id="HSB55825.1"
                     /translation="MITALILAALAGPGPVRPDTSIHFARFGTVAVYRPASPPLRTAL
                     FFSGDGGWNQGVVDMARMLMQSGTLVLGVDTPAYFKAVDASGDRCTYLAADLESLSQF
                     AQKSLGMAEYQVPLLVGYSSGAGAAYATLAQAPDNTFRGAIGLGFDPTLPTRTALCDR
                     NGLATVPAPRGAGREVRPVVHLPGKWIVLHGMQDAVWPVDSVSAFTGAVNGAEFVRLA
                     HVGHGFSETANWAPQFEHAVATLTDGTAPGPMPAEAVRDLPLIDLPMPQSPKDYFAVV
                     LSGDGGWASIDKQIGQELVQAGVPTVGFNSLQYFWQKRTPEQSAADLERIIRHYQQEW
                     HRTGVILVGYSRGADVLPLMTTRLPAALLDQVRLIAFLGLEHRTDLEFRVGAWLGSQH
                     NAAYDLAPEIAKLSGHRMLCVYGAKEGDTLCPDLPKGLAETVELKGGHHFDGDFAGLA
                     RLVMDHVN"
     gene            complement(4127..6706)
                     /gene="mprF"
                     /locus_tag="VLD58_15800"
     CDS             complement(4127..6706)
                     /gene="mprF"
                     /locus_tag="VLD58_15800"
                     /inference="COORDINATES: protein motif:HMM:NF033480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional lysylphosphatidylglycerol
                     flippase/synthetase MprF"
                     /protein_id="HSB55826.1"
                     /translation="MNDPPGAGSRPRLLARLAPLFGALVFGLALLGVHHALAEESYGT
                     LWRAILSLTPVHVFEAVGLTAVAYLALTGYDVLALRYVRHPLRYRQTGLASFISFSLS
                     NSVGLAMLTGASVRSRLYSAWGLPTPVIGRIIAFTGATLWLGVLLVAGAALMLEPATL
                     APLLHLGIPAAVSLGLVAVSAVLGYLAWCVRGGRPLAVRGWSFEPPSGRIALGQLFFS
                     ALDWLTAAGVLYLLLPQGAAPSFPAFAGIFVVAQGLGLVSHVPGGLGVFEGAVLLLVR
                     ESVPTAELAGALLVFRALYYFLPLLLATALLAGHEMLRHRERLGHISRAAQRLVAAFA
                     APLIAVAVFTTGAVLLFSGATPTVGWRLHLLREFVPLPLLEFSHFAASVVGMALVLLA
                     YGLSRRLRDAWGLTAVLLATGVVTSLLKGLDFEEATLALLTLGCLLPARERFHRRASL
                     WAERWSPGWVAAVAVALGASVWLGFFAYRHVEYSGELWWQFEFGADAPRFLRSTVGAA
                     AVALALALVRLFSPARQRRTGPATAELERTVDLIASGGQAQANLALLGDKQFLFSESG
                     RSFLMYAVRGRSWVALGDPVGDESEFADLGWRFRELCDQHGGWPVFYEVSRHRLPLYL
                     EQGLTLLKLGEEARVPLSTFTLEGKARASLRRWKNACEKAGCSVEILPAGASDQHLAE
                     LERVSNDWLATRKTREKRFSLGRFDPAYLRRFPLALVKVDSRIVAFATLWVTRTREEL
                     TVDLMRYTTQAPPNVMTYLFVQLMVWGRAEGYRWFNLGMAPLSGLGSRALAPLWHRLG
                     AFVFRHGENFYRFKGLREYKSRFDPVWEPRYLASPGGLALPFILTDIATLIAGGVKGV
                     FAK"
     gene            6997..7896
                     /locus_tag="VLD58_15805"
     CDS             6997..7896
                     /locus_tag="VLD58_15805"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF015692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HSB55827.1"
                     /translation="MPDPLLVQRARGALLGHAAGNALGVATEFIGTPDAIRSRFPTEL
                     RDVIRQDTPESPYDDDLALSLILCEELLEPDIDLHRLAHKWAEWADRDGRGLGEWSLR
                     ALRHIKTHDAPPASTGGHAGNGSVSRCLPIALRMAGSLPNLVSGSYHIAMLTHPDERC
                     AWGAVAVNLAAASFLSGRRDFIGEVLEVLRNNDAPQELRDAVGRVPLERREDLPINGP
                     SAGYVIHAVEIGLWFAYHEPDLERGIIWLANAGGDTDTNAAVAGGLMGARDGDKAVPA
                     RWLNAIPDVARIRSLAERLVGAE"
     gene            8012..9520
                     /locus_tag="VLD58_15810"
     CDS             8012..9520
                     /locus_tag="VLD58_15810"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HSB55828.1"
                     /translation="MRYSLVLLGLVAATPLAAQQYAVDTTGSGAITAQALQHSEVMKN
                     LQYLADMIGPRLTGSAAMRKANDWTAERFKAYGLASRLEAWDFGVTWERGPASFRLTA
                     PFERNLTGHSWAWTAGTGKAVSGPVVRVDASNADSITHYASKMKGAWLILRPGANIWN
                     PDGPPMTAADSQAMREGRRRAFGQPQDTSEAARKARQQFNVDRPYLLKKAGALGILTD
                     GSKEQGLMNMSGSPNSVSPLPNVVIAHEDYAMFERLIAMGVTPRMEGRIENKLGKTPV
                     QQWNTVAEIKGTDLPGQVVILGAHLDSWDLGTGVTDNGTGSMVVLEAARAIMQSGLKP
                     RRTIRFILFSGEEEGLLGSRAYAAQHAAEADSIQAVLVLDNGTGMIKGQALQGRNEFE
                     QLWKDLLAPVNSLGATEVRQANKGGTDHLAFIPYGVPGFNFDQESRGYNHTHHSQVDT
                     YDHAVPSDLMQASAVMAVTAYELANLQALLPRGNRTPVTPPSPAKPSPGVAR"
     gene            9646..10503
                     /locus_tag="VLD58_15815"
     CDS             9646..10503
                     /locus_tag="VLD58_15815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55829.1"
                     /translation="MSPCAGRRSLLAGFAVTAALLGGVSCGGDNGPSKVTIQDFIAGV
                     TDVGATVTAVRHAGAPPASSGAQTVNVTGGSTLINGGSAQITVGAATGDFSDVYVTVD
                     GVDGYYQLSLPGNVATKDLLLTAAQKVAQHTFNISYGIGSGGGVGGTASVPVTVVAVG
                     TGEVQVSVSWDAESDVDLHVVQPDDEEVYYGNTTSAVGGKLDLDSNAACDIDHVKNEN
                     ITYPSAPSGSYKVRVDYYDACSVGTTHYVVTVQRKGHPAETFTGTFTGAGDGGAAGSG
                     VDITTFTYP"
     gene            complement(10570..10968)
                     /gene="queF"
                     /locus_tag="VLD58_15820"
     CDS             complement(10570..10968)
                     /gene="queF"
                     /locus_tag="VLD58_15820"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR03139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HSB55830.1"
                     /translation="MAIAEGRTIPFVGPEQVDVAVLETFEYTGPEQEIVTETDEFSAV
                     CPYSGLPDFAKLVIRYVPAGKCIELKSLKYYVTSYRNVGIFQEHATGKMAEDLARVLS
                     PKWIEVKTIYNVRGGFLTTCVVRLPATTSR"
     gene            complement(11026..>13991)
                     /locus_tag="VLD58_15825"
     CDS             complement(11026..>13991)
                     /locus_tag="VLD58_15825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55831.1"
                     /translation="GVAAAPAATLRALALAVPEFAERYPELPAGRADDLQESVARVLA
                     EAATEGRIVLAVDDVHLADRPSREMLESLLRRPVGGVLVVLTTAPEVIALRELERRPA
                     AAGQLYRVRLGPLDQDDLERALASMAEFRPQDRAALARRLLAETGGNPLAAVELATAL
                     ADRGIISPTADGSWIATLPAPGVPLPLPTTFTETMAARLRELPPNATRTLQAAAVLAR
                     NADVELLLELTGFTSDELDAALSQLLARRLLRSAPDGADHVEFTHEALRRTVYEGLSP
                     VRRGELHAIALAALRRRAPRNSAAAAALSYHQERAGTRRPGRSPLLLSLAGIMLLSVV
                     LLWVSRHRRQADGPVQLAIVPWSGTVDSTSRDYDRLAAEALALALIHARNLSVVEPAL
                     LDAPRAGIKGNPTLVLESHVESSNAGLHLRGLVRRATGDHAVIATAMIDGQPDALPEL
                     AARLAARLFPDQLGAIPFELSAAQTTSVPALQSYFSGLRLARHADMEPAAQAFWQATR
                     GDRSMAAAWHALSRINAWYFLSHRAALMADTAAAHVGGLLAHEVLLFQGWAAFAHGRA
                     DDAEGRFRQALAISSGNVEATIGLAEVLQHHNRTRGRSPLEAKALWEQAARADPTDWR
                     PHAHLWELPAIEGDWNSALAWLTAAAAYQRDTTAATRLILAQLRGDTAGLLARVAELP
                     SDNEWGIMQLAETEGVVLERLDLAAACLKRLTEPGHPTEVQAFARAQLAHVALAQGRW
                     RDALQSLSLARALEPVSAATSEAVLWLAPFLPPSLADTGRRSMRQRLRQAPLSPVRRT
                     FLFWFDLERAREPLLREYLDRMLAPEPGRGGNLPAFPASWGGQPDSLTTMVPSLRASL
                     AARRSFARDTAEALAILERSWEGAEAGDQQLSPFWSRPWDHYVRAEALEKRRPEVAAN
                     LFQQAGTLSLTTLPYAAPGALREGRIRESLGDKTGAVQAYRRVVRLWAGADPEFRPGL
                     EEARARLKALGAGPS"
BASE COUNT         2323 a         4787 c         4820 g         2061 t
ORIGIN      
        1 cggccctggt accggcacct gatctacgcg ccggggttct acaccggtta tggggtgaag
       61 accttgccgg ggattcgcga ggcgatcgag cagaaggact acaacctggc tgggcgggag
      121 attgtgcggg cggcggaggt cctgggggcg gaagcggcgc tggtgagcca ggcggcggaa
      181 gccctgagcg ccgcggcgaa gtagccggcc ctagaagcgg cctttcctct cctcgaagtg
      241 ggtcggcttc cccaggagcc ggccccctcg ctcgagccac gccgcggtcc actcgatcac
      301 ccgatcgggt ggcaccgcgg gcgggccgaa cagctccacc gaccgccggg cgttgctgag
      361 cagggcgtcc ggcgcctcgg tcccctcgaa tagcggcgtt ctcccgaaat accggccgaa
      421 ctgttccgcg atccagcgga tcgagagctg ctccggcccc gtcacgttga gcaccgtggc
      481 gggtgaggtc gtgtgcgcca ggcattggag tgcccgggca ttcgcgtcgc cctgccagat
      541 caggttgacg tgccccatcg tgagcggcac tgcctcgccg tgcagcaccc ggcggccggt
      601 gtctaccagc accccataac ggagctccac cgcgtagttg agccggaaga tcagtgcccg
      661 ggtaccgcgg gtgagtgcgt agtgctggaa gatccgctcg cgggcgaggc agctcatggc
      721 atactcgccg atcgggccca cggacgagtc ttccgtcggt ccccccgagc cgacgggcca
      781 gagtgggtag acattccccg tcgagaacac cacggtgcga gccccggcat aacgctctgc
      841 cacgaaggcc ggtagcgcgg cgttcatcgc ccaggtggtg gcggggttac catgggtgcc
      901 gaacttctgc ccggccatga acacgaggtt cggcgcatca ggcagggagc caagggctgc
      961 cgggtggagc agatcggcct ggcgcacctc gactccggcg gcagcgagcc gctccgccag
     1021 tccaggctcg ctgaaccggg agactgcgat gacgcggtcg ggccgcccca atgcgaccag
     1081 ggcccgtcgc gccatcatgg cgagcgacgg gcccatctta cctccggcac cgaggatcag
     1141 gatatccccg ggaacggttg ccagggtctc cagcagcccc gccgtgggcc gggacagcag
     1201 ttcctccagc tcaggttcgg tggtgggaca ttccatttca tgccatcccg agggagccaa
     1261 cgcgaccgag ggacccctga tctgtgaaag aaagtcaggg atccctcgct tcgctcggat
     1321 gaccccaagc taacggctaa cggctaacgg ctaacggccc tacccccgca tggccatcgg
     1381 cacgaactcc cgctccgggt ggccgatgaa gatctgccgg ggacgcgaga tcttctgatc
     1441 cttgtcgcgc agcatttctt cccactgcgc cacccatccc ggcagccggc ccagcgcgaa
     1501 gagcaccgtg aagtagtcgg tcgggtagcc catcgcctgg tagatcaggc cggagtagaa
     1561 gtccacgttg ggatacagct tccgcttgat gaagtactcg tcctggagcg cgatcttctc
     1621 gagctcgagc gcgatctcga gcttggggtt gagcccggtc tgctcgaaga cgtcgtacgc
     1681 caccttcttg atcagcttgg cccgcggatc gtacgacttg tacacccggt ggccaaagcc
     1741 catcagccgg tcgccccctt ccttcacctc cttgatgaag gccgggatgt tcttcttgtc
     1801 gtcgatatgg tccagcatcg tgagcaccgc ctcgttggcg ccgccgtgca gcggcccgta
     1861 cagcgccgcg atgccggccg acaccgccga gaaggggtcc acgtgggagg agccgacact
     1921 ccgcaccgcg ctggtggagc agttctgctc gtgatcggcg tggaggatga gcaggatctc
     1981 gagcgcccgc tgcagcaccg ggttgggctc gtgcttgccg ccgatctcga aggtcatgtt
     2041 gacgtagttc ccgatgtagc tcaaatcgtt ccgtgggaac acgtagggca ggccgcgcga
     2101 gtgccggaag gcgaaggccg cgatggtggg gatcttggcg atcaggcgca cccgctgcag
     2161 gtgccggctc ttcgggtcct cgatgtgctt ggcatcggga tagaaggtcg agagcgcgcc
     2221 caccgcaccg agcagcatgc ccatcgggtg ggcgtcgtag cggaagccct cgaggaactt
     2281 gatgacgttg gtgtggacgt aggtgtggta gcgcacctcc tcttcccacg tgtcgagctg
     2341 ggcccgggtg gggagctctc cctcgaacag gaggtaggcg gtctcgagga agctggcctt
     2401 ctccgccagc tgctcgatcg ggtagccccg gtagcggagg atgcccttgt cgccgtcgat
     2461 gaaggtgatg gcgctgcggc agctcgcggt attgaggaac gccggatcgt aggtcatgag
     2521 gccgaagtcg tcgtcggccg tcttgatctg ccggaggtcc atcgccttga tggtcccctc
     2581 ggtcaccgga atctcgtagc tctttccggt acgattgtca gtgatggtca ggctgtcctt
     2641 ggacacacgt cgctcctcgc aggcgggcag aaatgacaag gagcgcaaag atagccgccg
     2701 aacggcgtgg gggggaagcc gctcggcggt ggtggtggga cgggtcctga aggtcagttc
     2761 acatggtcca tcaccagccg ggccagtccg gcgaaatctc cgtcgaagtg gtggccgccc
     2821 ttgagttcca ccgtttccgc gagccccttg ggcagatcgg ggcagagggt atcgccctcc
     2881 ttggcgccat agacgcagag catccggtgg cccgacagct tggcgatctc gggagccaga
     2941 tcgtaggcgg cgttatgctg gcttcccagc cacgcgccga cccggaactc gagatcggtg
     3001 cgatgttcga ggcccaggaa ggcgatcagc cggacctggt cgaggagtgc cgccggcagg
     3061 cgggtcgtca tgagtggcag gacatcggcg ccgcgggagt accccaccag gatgaccccg
     3121 gtccggtgcc actcctgctg gtaatgccgg atgatccgct cgagatcggc ggcgctctgc
     3181 tccggggtcc gcttctgcca gaagtattgc agcgagttga agcccaccgt gggaaccccg
     3241 gcctgcacca gttcctggcc gatctgcttg tcgatgctgg cccacccccc gtcacccgaa
     3301 agcaccaccg cgaagtaatc cttcggcgac tggggcatcg gcagatcgat cagcggcaga
     3361 tccctgaccg cctcggccgg catgggcccg ggcgcggtgc cgtcggtcag ggtcgcgacg
     3421 gcgtgctcga actgcggcgc ccagttggcg gtctccgaga atccgtggcc cacgtgcgcc
     3481 agccgcacga actccgcacc attcaccgca ccggtgaatg ccgagaccga atccaccggc
     3541 cagaccgcgt cctgcatccc atggagcacg atccactttc cggggaggtg gaccaccggg
     3601 cgaacctcac gtcccgcacc cctgggcgcg ggcaccgttg cgagtccgtt ccggtcgcag
     3661 agggcggtgc gggtgggcag ggtcgggtcg aacccgagtc cgatggcgcc gcggaacgtg
     3721 ttgtcgggcg cctgggcgag tgtggcataa gccgcgcccg cgcccgagga gtacccgacc
     3781 aggagcggca cctggtactc cgccatgccg agcgatttct gggcgaactg actcagcgat
     3841 tcgagatcgg cggcgagata ggtgcaccgg tcgccgctgg catccaccgc cttgaagtag
     3901 gccggcgtgt cgacccccag caccagcgtg cccgactgca tgagcatccg ggccatgtcg
     3961 accacaccct ggttccagcc gccgtcgccc gagaagaaga gggcggtgcg gaggggcggc
     4021 gaggcggggc gatacactgc caccgtgccg aatcgggcga agtggattga ggtgtcgggc
     4081 cggaccgggc cgggcccagc gagtgcagcg aggatgagcg cagtgatcac ttggcgaaga
     4141 ctcccttgac gccaccggcg atgagcgtgg cgatgtcggt caggatgaac ggcagcgcga
     4201 ggccgccggg cgaggcgagg taacggggct cccacacggg atcgaagcgc gacttgtatt
     4261 cccggagccc cttgaagcgg tagaagttct cgccgtggcg gaacacgaag gcgccgagcc
     4321 ggtgccagag cggggcgagc gcgcggctgc cgagtccgga gagcggggcc atgcccaggt
     4381 tgaaccagcg atacccctcg gcccggcccc agaccatgag ctgcacgaag aggtaggtca
     4441 tcacattggg cggcgcctgg gtggtgtagc gcatcaggtc caccgtcagc tcctcgcggg
     4501 tgcgggtgac ccagagcgtc gcgaaggcga cgatcctgct gtccaccttc accagcgcca
     4561 gcgggaagcg ccgcagatag gccgggtcga agcggccgag cgagaaacgc ttctcccgcg
     4621 tcttccgggt tgccagccag tcattcgaga cccgctccag ctcggcgaga tgctgatcgc
     4681 tggctccggc cgggaggatt tccacactgc agccggcctt ctcacaggca ttcttccagc
     4741 gccggagact cgcgcgcgcc ttgccttcca gcgtaaaggt cgaaagcggc acccgtgcct
     4801 cttcgcccag cttgaggagc gtgagcccct gctcgaggta gagtggcagc cggtggcggc
     4861 tcacctcgta gaataccggc caaccgccgt gctggtcgca cagttcccgg aaacgccagc
     4921 ccaggtcggc aaactccgac tcgtccccaa ccggatcgcc cagcgccacc cagctccgcc
     4981 cgcgcaccgc gtacatcagg aacgaacggc ccgattcgct gaagaggaac tgcttgtccc
     5041 ccagcagcgc gaggttggcc tgggcctggc cgccgctcgc gatcagatcc accgtgcgtt
     5101 ccagctcggc ggttgcaggc ccggtcctgc gctggcgtgc agggctgaag agacggacca
     5161 gggccagcgc cagcgccacc gcggcggcgc ccacggtcga gcgaaggaag cggggcgcat
     5221 cggccccgaa ctcgaactgc caccagagct cgcccgagta ctccacgtgc cggtatgcga
     5281 agaagcccag ccacacactc gcgccgagcg ccaccgccac tgccgcgacc cagcccgggc
     5341 tccatcgctc ggcccagagc gacgcgcgcc ggtggaaccg ctccctggcc gggagcagac
     5401 agccgagcgt gagcagcgcg agggtcgcct cttcgaaatc gaggcccttg aggagcgagg
     5461 tcaccacccc ggtcgcgagc agcaccgcgg tgagtcccca ggcatcgcgg agccggcgcg
     5521 agagtccata cgccagaagc accagcgcca tcccgaccac actcgcggcg aagtgggaga
     5581 actcgagcag cggcagggga acgaactcgc ggaggagatg gagccgccag ccgacagtgg
     5641 gtgtcgcacc ggagaagagc aggacggcgc cagtggtgaa gaccgcgacc gcaatgagcg
     5701 gagcggcaaa cgccgcgacc agccgctggg ctgcccggga gatgtggccc agccgctccc
     5761 ggtgccggag catttcgtgt cccgcgagga gcgccgtggc aagcagcagc ggcaggaagt
     5821 agtagagcgc ccggaagacg agcagcgcac cggccagctc tgccgtgggc accgattcgc
     5881 gcaccagcag cagcaccgcg ccctcgaaca ccccgagacc gccgggtacg tgactcacca
     5941 ggccgagtcc ctgggcgacc acgaagatac cggcgaaggc gggaaagctc ggcgccgccc
     6001 cctgaggaag gaggaggtac aacacgcccg cggccgtcag ccagtcgagt gccgagaaga
     6061 acagctgccc gagggcgatg cggccgctgg gaggttcgaa actccagccc cggacggcga
     6121 gcggacggcc gccgcggacg caccacgcca ggtagccgag cacggcgctc acggcgacga
     6181 gaccaaggct gactgcggcg gggatcccga gatggagcag cggagcgagc gttgccggtt
     6241 cgagcatcag ggcggcgccc gcgaccagca gtacgccgag ccagagtgtt gcgccggtga
     6301 atgcgatgat ccggccgatg acgggggtgg gcagccccca tgccgagtag agccggctcc
     6361 gcaccgatgc accggtgagc atggcaaggc cgacgctgtt gctgagcgag aaactgatga
     6421 atgacgcgag gccggtctgg cggtagcgca gcgggtgccg cacgtaccgg agcgccagga
     6481 cgtcgtaccc ggtgagcgcc agataggcga ccgccgtcag gcctaccgct tcaaagacgt
     6541 gaaccggcgt gagcgacaga atggcgcgcc acagtgtccc gtagctctcc tcagcgaggg
     6601 cgtgatggac gcccagcagg gccaaaccga agaccagcgc cccaaagagt ggcgcgagcc
     6661 gggccagaag gcgtggccgg ctgccggcgc caggagggtc attcacttcc gctaattgcg
     6721 cagcaccaac gggttgctgc gtcggttcgc gggtcgatgg ttccaggatc gccggcacgt
     6781 tgcctcccga tcgttggtct cgcgcgcggc gatgcgcgct gggacgcctg accggtaacg
     6841 caccgggtgt gccactgggc tgggaggggg agcggctggc aaacggtgcc aatcccggca
     6901 cttgacgcag ggatcggcga cggggaatac accgcccctg aatcggcccc gccgccgtag
     6961 cccagtggct gcccatgatg ataccttctg gccgccatgc cagaccctct gctcgtccag
     7021 cgcgcccgcg gtgccctcct gggacacgcc gcgggcaacg cgctgggggt cgccaccgag
     7081 ttcatcggca cccccgacgc tattcgcagc cggtttccca ccgagctccg cgacgtcatc
     7141 cggcaggaca cccccgagtc gccctatgat gacgacctgg cgctgagcct cattctctgt
     7201 gaggaactgc tcgagccgga tatcgacctc caccggctgg ctcacaagtg ggccgagtgg
     7261 gccgaccggg acggccgggg actcggcgag tggagtttgc gggccctgcg ccacatcaag
     7321 acccacgatg cgccgccggc ctcgaccggt ggccacgccg gcaacgggtc ggtctcacgc
     7381 tgcctgccga tcgccctccg catggccggc tccctgccca acctggtgag cggctcctac
     7441 catatcgcaa tgctgacaca tcctgatgag cgctgcgcgt ggggagccgt ggccgtgaat
     7501 ctggccgctg cctcattcct gagcggccgc cgggatttca tcggtgaggt gctcgaggtc
     7561 ctccggaaca acgacgcacc ccaggaactc agggacgcgg tcgggcgggt accgctggaa
     7621 cggcgggaag acctcccgat caacggaccg tcagcggggt acgtaataca tgccgtggag
     7681 atcggcctct ggttcgccta ccacgaaccc gatctggagc gcggcatcat ctggctggcc
     7741 aacgccggtg gcgacactga caccaacgcg gcggtggcag gcggcctgat gggagcccgc
     7801 gatggcgaca aggccgtgcc ggcccgctgg ctcaacgcga ttcccgatgt tgcccgcatc
     7861 cggagcctgg ccgaacgcct ggtgggggcg gaatagctcg aagcctgccg tgacccccga
     7921 cccccgaccc tagaccctag accctggacc tctagacctc tagacctctc gacctccaga
     7981 cccaagaccc caaaccccag ccccgacaac catgcgctac tccctcgttc tactcggcct
     8041 cgtcgccgcc accccgctcg ccgcgcagca atacgccgtc gacaccaccg gcagcggcgc
     8101 catcaccgct caggcgctgc agcactccga ggtcatgaag aacctccagt atctggccga
     8161 catgatcggg ccccgcctca ccggctcggc tgccatgcgg aaggccaacg actggaccgc
     8221 cgagcggttc aaggcctacg gcctggcctc gcggctcgag gcgtgggact tcggagtgac
     8281 ctgggagcgg gggccggcct cgttccgcct caccgcgccc ttcgagcgga acctgaccgg
     8341 gcacagctgg gcctggaccg ccggtaccgg caaggcggtg agcggccccg tggtgcgggt
     8401 cgacgcgagc aacgcggaca gcatcaccca ctatgcgtcg aagatgaagg gcgcctggct
     8461 cattctccgt cccggcgcca acatctggaa ccctgacggc ccgccgatga ccgcggccga
     8521 cagccaggcg atgcgggaag gccgccgccg cgccttcggg cagccgcagg acacctcgga
     8581 agccgcgcgc aaggcccgcc agcagttcaa cgtcgatcgc ccctatctcc tcaagaaggc
     8641 tggcgccctc ggcatcctga ccgacggatc caaggaacag gggctcatga acatgagcgg
     8701 ctcgcccaac agcgtctctc cgttgcccaa cgtggtgatc gcccacgagg actacgccat
     8761 gttcgagcgg ctcatcgcca tgggcgtcac tccgcgcatg gaaggccgca tcgagaacaa
     8821 gctcggcaag accccggtgc agcagtggaa caccgtagcc gagatcaagg gcaccgatct
     8881 ccccgggcag gtggtgatcc tcggcgcgca cctcgacagc tgggacctcg gcaccggcgt
     8941 gaccgacaac ggcaccggtt cgatggtcgt gctcgaggcc gcccgggcca tcatgcagtc
     9001 gggcctcaag ccccgacgca ccatccggtt cattctcttc tcgggcgaag aggagggcct
     9061 gctcggctcc cgcgcctacg ccgcccagca tgccgccgag gccgatagca tccaggcggt
     9121 gctggtgctc gacaatggca ccggcatgat caagggccag gcgctgcagg ggcggaatga
     9181 gttcgaacag ctctggaagg atctgctggc cccggtgaac tcgctcggcg ccaccgaggt
     9241 gcgtcaggcc aacaagggcg ggaccgatca cctcgccttc atcccgtacg gcgtgcccgg
     9301 cttcaacttc gaccaggaat cgcggggcta caatcacacc caccactccc aggtcgacac
     9361 ctacgatcac gccgtgccct ccgacctgat gcaggcttcg gcggtgatgg cggtgaccgc
     9421 ctatgagctc gcgaatctcc aggcgctgct tccgcgcggc aaccggactc cggtgacgcc
     9481 gccgtcgccg gccaagcctt caccgggcgt ggcgcgctga gaacaattat ctgtaacgct
     9541 cccggacgat gaagtttctc atcgcttgat ccgggcgcgg cctcgtcaca ggttggtggg
     9601 gcgaatcgac cacgattcgc cccaccttct tgttcgagag tgcctatgtc cccctgcgct
     9661 ggccgccgct cactgcttgc cggattcgcc gtcactgccg ccctcctcgg cggcgtgagc
     9721 tgtggtggcg ataacggccc ctcgaaggtc accatccagg atttcatcgc cggcgttacc
     9781 gatgtcggtg ccacggtcac tgcggtacga catgccggtg cgcctccggc atcgagcggg
     9841 gcccagacgg tcaacgtgac gggtggcagc accctgatca acggcggcag cgcccagatc
     9901 accgtcggtg ccgcgaccgg tgatttcagc gacgtgtacg tcacggtcga cggggtcgat
     9961 ggctactatc agctctccct gcccggcaat gtcgccacca aggacctgct gctgaccgcg
    10021 gcgcagaagg tggcccagca caccttcaac atctcctacg ggatcggaag cggcggcggg
    10081 gtcggtggga cggccagcgt gccggtcacg gttgtcgccg tcggcaccgg tgaagtgcag
    10141 gtgagcgtgt cgtgggatgc ggagagcgac gtggacctgc acgtggtgca gccggacgac
    10201 gaagaggtgt attacgggaa caccacgtcg gcggttggtg gcaagctcga cctcgattcc
    10261 aacgccgcct gcgacatcga ccacgtcaag aacgagaata tcacgtatcc gtcggcaccc
    10321 agcgggagct acaaggtgcg ggtcgactat tacgacgcct gctccgtggg gacgacgcac
    10381 tacgtcgtga cggtgcagcg gaagggacac ccggccgaga ccttcaccgg gaccttcacc
    10441 ggtgcgggcg acggcggcgc cgcgggctcg ggcgtggaca tcacgacctt cacctacccg
    10501 taggcgcagt agccacaaca aaagcgggac cgggcacggt gcccggtccc gcttcccctc
    10561 ccgtgtccct tagcgcgacg tggttgccgg cagccgcacg acgcacgtgg tcaggaaccc
    10621 gccccgcaca ttgtagatgg tcttcacctc gatccacttg ggcgagagca cccgggccag
    10681 gtcctccgcc atcttcccgg tcgcgtgttc ctggaagatt cccacattgc gatagctggt
    10741 gacatagtac ttgaggctct tgagctcgat acacttcccc gcagggacgt agcggatcac
    10801 cagcttggcg aaatcgggca gcccgctgta gggacagacg gcgctgaatt cgtcggtctc
    10861 ggtgacgatc tcctgttccg gcccggtgta ctcgaaggtc tccagcaccg ccacgtctac
    10921 ctgctccggt cccacgaacg ggatcgtgcg cccttccgcg atcgccatgc cccagctcct
    10981 ttcgctcgcc gcccgtgaga actgcgcggc ggcaccggcc tcaatctaag acggtcccgc
    11041 ccccaatgcc ttgaggcgcg cgcgcgcctc ctcgagaccc ggacggaatt cgggatcggc
    11101 tccggcccag aggcgcacca cccgtcggta ggcctgcacc gcgccggtct tgtcgcccag
    11161 gctctcgcgg atccgccctt cccgcaatgc gcccggcgcg gcgtagggca gggtggtgag
    11221 ggagagtgtc ccggcctgct ggaagagatt ggcggcgact tccggccgcc gcttctccag
    11281 cgcctcggcc cgcacatagt gatcccaggg ccgggaccag aagggagaga gctgctggtc
    11341 accggcctcg gcgccttccc agcttcgttc caggatcgcg agcgcctccg cggtgtcacg
    11401 cgcgaaactc cgccgggcgg cgagactggc gcggagcgag ggaaccatgg tcgtcagtga
    11461 atcgggctgg ccaccccagc tggcgggaaa ggccggcagg tttccgccgc gcccaggctc
    11521 gggtgccagc atccggtcga gatactcgcg gagcagcggc tcgcgggccc gctcgagatc
    11581 gaaccagaag aggaaggtgc gtcgtaccgg ggaaagtggg gcctgacgga gccgctgccg
    11641 catactccgc cgtcccgtgt cggcgaggct gggcggcagg aagggcgcga gccagagcac
    11701 cgcctcgctg gtggccgccg acaccggctc gagggcgcgg gcgaggctta gcgactgcag
    11761 cgcgtcgcgc cagcgtccct gggccagcgc cacatgggcg agctgggccc gcgcgaacgc
    11821 ctgcacctcg gtcggatgcc ccggctcggt gagacgcttg aggcaggcgg ccgcgagatc
    11881 gagccgttcc agcactactc cctccgtctc ggccagctgc atgattcccc actcgttgtc
    11941 ggaggggagt tctgctaccc gggccaggag acccgcggtg tcgccccgga gctgggccag
    12001 gatgaggcgg gtcgcggcgg tggtatcgcg ctggtacgcg gcggctgctg tcagccacgc
    12061 gagggcgctg ttccagtctc cttcgatcgc agggagttcc cagaggtgcg cgtggggccg
    12121 ccagtcggtg ggatcggccc gcgccgcctg ctcccacagc gccttcgctt ccagcggaga
    12181 gcgtccccgg gtccggttgt gatgctggag cacctccgcg agcccgatcg tcgcctccac
    12241 gttgccactg gagatcgcga gggcctgccg gaagcggcct tccgcatcat ccgcccgtcc
    12301 gtgcgcaaag gccgcccacc cctggaacag gaggacctcg tgagccagga gcccgcctac
    12361 gtgggcggcg gcggtgtctg ccatcagcgc cgcgcggtgg ctcaggaaat accaggcgtt
    12421 gatgcgggag agggcatgcc aggcggccgc catcgaccgg tccccccggg tcgcctgcca
    12481 gaacgcctgc gcggcgggtt ccatgtcggc gtgacgcgcc aggcggagcc cgctgaagta
    12541 cgactggagc gcgggcaccg aggtggtctg cgcggccgag agctcgaacg gaatcgcgcc
    12601 gagctgatcg gggaagagtc gtgcggcgag ccgggcggcg agttccggca aggcatccgg
    12661 ctgtccgtcg atcatcgcgg tcgcgatcac cgcgtggtct cccgtcgcgc gccggaccag
    12721 cccgcggagg tgcagtcctg cattgctcga ctcgacgtgg ctctcgagca ccagcgtggg
    12781 gttccccttg atgcccgccc tgggcgcgtc gagcaatgcc ggctcgacca cgctcaggtt
    12841 cctggcatgg atgagtgcca gtgccagggc ttcggcggcg agacgatcgt agtcgcgtga
    12901 ggtgctgtcg acggtgccgg accacggaac gatggcgagc tggaccggtc cgtcggcctg
    12961 ccttcggtga cggcttaccc agaggagcac gaccgacagc agcattatac cggcgaggct
    13021 caggagcagc ggtgagcggc cgggccggcg agtgccggca cgttcctggt ggtagctgag
    13081 cgccgccgcc gccgccgagt tcctgggcgc ccggcgccgg agggcggcga gcgcgatggc
    13141 gtggagctcg ccccgccgga ccggggagag tccctcgtac accgtgcggc ggagcgcctc
    13201 atgggtgaac tcgacatgat cggcgccatc gggggcggag cggagcagcc ggcgcgcgag
    13261 cagctggctc agggccgcgt cgagctcatc gctggtgaac ccggtgagct cgagcagcag
    13321 ctccacgtcc gcgttgcggg ccagcaccgc ggcagcctgg agagtccgcg tggcgttggg
    13381 cggcagctcc cggagccggg ccgccatcgt ctccgtgaag gtggttggca gcggcagcgg
    13441 aaccccgggg gcgggcagcg tcgcgatcca gctcccgtcc gccgtcggcg agatgatacc
    13501 acggtcggca agcgcagtgg ccagctccac tgccgcaagg ggattgcccc cggtctccgc
    13561 caggagccgg cgagccaggg ccgcgcgatc ctgcggccgg aactccgcca tcgaggccag
    13621 cgcccgctcc aggtcatcct ggtcgagcgg accgagccgc acccggtaga gctggccggc
    13681 cgcggcggga cgccgttcca gttcccggag cgcgatgact tcgggcgcgg tggtcagcac
    13741 caccagcacc ccgcccaccg gccgccgtag cagggactcc agcatttccc ggctggggcg
    13801 gtcggcgaga tgcacgtcat ccactgccag gacgatccgc ccctcggtcg ctgcctcggc
    13861 caggacccgc gcgaccgact cctgcaggtc atcggcccgg ccggcgggga gctctggata
    13921 gcgctccgcg aactcgggca ccgccagggc gagcgcccgg agtgtcgccg ccggcgccgc
    13981 ggccaccccg g
//
LOCUS       DATIFF010001082         1429 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_906181, whole genome shotgun sequence.
ACCESSION   DATIFF010001082 DATIFF010000000
VERSION     DATIFF010001082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1429
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_906181"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            88..474
                     /locus_tag="VLD58_15830"
     CDS             88..474
                     /locus_tag="VLD58_15830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55832.1"
                     /translation="MDDPIDLSPLDPRRDPARFERMVGAIVQAAMTPPRATRGTLVLA
                     ELLRWTRPALAAAAVVALVAGTALFSLRRPSAAPGEAILEAVGIPEPLAAWARADHYP
                     STAELLAAFPQAGDRPAPSAPQPRIP"
     gene            471..947
                     /locus_tag="VLD58_15835"
     CDS             471..947
                     /locus_tag="VLD58_15835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55833.1"
                     /translation="MTMHQIAPSERLRARGLALLLAMFLAGAMAGAATDRYILKRDRP
                     LLERESGLRRRGPDAGEIPARLRQLGLTPEQERRIRAVFARWQPRADSIMRDVLPQVR
                     AIEHGMFQEMVCVLTPAQDSAYLAWRTREGLNAEEGREQLSRVTAGTCPTDAATPP"
     gene            1077..>1429
                     /locus_tag="VLD58_15840"
     CDS             1077..>1429
                     /locus_tag="VLD58_15840"
                     /inference="COORDINATES: protein motif:HMM:NF024742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSB55834.1"
                     /translation="MARLLVLFVTAFVDMVGLAMIVPLLPYYATEFGASATVVGLLIS
                     AFSVAQLVVAPVWGRFSDRYGRRPAILAGLLVTAIAYIIFGLAGSVAVLLLSRIVQGL
                     GGGTIGVVQAYVADAS"
BASE COUNT          193 a          524 c          478 g          234 t
ORIGIN      
        1 cggtggtcat gtcccgccag agcctgttcc aggcccggcg ccggctccgg agcgccctcg
       61 gcccgaacct gttgcaggag taccgagatg gatgatccga tcgatctctc accgctcgac
      121 cccaggcgcg atccggcccg cttcgagcgc atggtgggcg ccatcgtcca ggcggcaatg
      181 actccgcccc gggcgacgcg aggcacgctt gtactggcag agctgcttcg ctggaccagg
      241 cccgcccttg ccgccgccgc ggttgtggcc ctcgtggctg gtaccgccct cttctcgctc
      301 cgacgcccgt ccgctgcgcc gggcgaggcg attctcgagg cggtgggcat tcccgagccg
      361 ctcgcggcat gggccagggc tgatcactac ccgagcacgg ccgagctgct cgccgccttc
      421 ccgcaggccg gcgatcggcc cgctccttcg gccccacagc cgaggatccc atgaccatgc
      481 accagatcgc gccgtccgag cggctccgcg cacgcggcct cgcgctgctg ctcgccatgt
      541 ttctggccgg cgccatggca ggcgcggcga ctgacagata catcctgaaa cgggaccgac
      601 cgctgctcga acgggagtcg ggccttcggc gccggggacc ggacgcgggc gaaatcccgg
      661 cgcggctccg gcagttgggc ctcacgcccg agcaggagcg gcggatcagg gcggtattcg
      721 cgcgctggca gccacgggcg gactcgatca tgagggacgt gctgccgcag gtccgggcaa
      781 tcgagcacgg catgtttcag gagatggtgt gcgtgctgac tcccgcgcag gacagcgcct
      841 acctggcctg gcggacgcgg gagggcctca acgccgaaga aggacgggag cagctctcca
      901 gagtgaccgc ggggacctgc ccgaccgatg ccgcgacgcc cccgtaagga tcaggtaaag
      961 gaatccgcac cccgataacc atcctcgttc gtctggcccc gggccggctc cctggtcatc
     1021 tttgggtcgc cggatcgact cgccctgcaa tcggccgggc gaccaaccgc tgccacatgg
     1081 cgcgactact cgtcctcttc gtcaccgcct tcgtggacat ggtggggctc gcgatgatcg
     1141 tgcccctcct gccctactac gccaccgagt tcggggccag cgccaccgtg gtcgggctgc
     1201 tgatctcggc cttctcggta gcgcaactgg tcgtcgcccc cgtgtggggc cgattctccg
     1261 accgctacgg acgtcgcccg gccatcctcg ccggcctgct ggtcaccgcc attgcgtaca
     1321 tcatctttgg cctggccggg tcggtagccg tcctgctgct ttcccgaatc gtccagggcc
     1381 tgggcggcgg caccatcggc gtggttcagg cctacgtggc ggatgcctc
//
LOCUS       DATIFF010001083         1066 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1985587, whole genome shotgun sequence.
ACCESSION   DATIFF010001083 DATIFF010000000
VERSION     DATIFF010001083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1985587"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..678
                     /locus_tag="VLD58_15845"
     CDS             <1..678
                     /locus_tag="VLD58_15845"
                     /inference="COORDINATES: protein motif:HMM:NF014430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSB55835.1"
                     /translation="WIPPEHVLEARTLARLYKDLLDERGGWHQRIAATLFHQGVPVIA
                     SMSTRQGRDAVAEVDLSPAGRQAVEVGLRQIDRLTVELDQLRRQLDWLSRHQPGARAL
                     RASQYGIGPITSVVIWAELGDVRRFRNSTTVVRHTGLDVTVHSSDIHRAAGHLSRQGP
                     QLLRWALYESAKCAARTTAPDHDYYRTSSDRRTAGLATISVARKLARRCYHTLRDLGE
                     EALAPAA"
BASE COUNT          177 a          411 c          335 g          143 t
ORIGIN      
        1 tggatcccac ccgagcatgt gctcgaggcg cggaccctgg cgcggctgta caaggacctg
       61 ctcgatgaac gcggcggatg gcatcagcgc atcgccgcga ccctgttcca ccagggcgta
      121 ccggtgatcg ccagcatgtc caccaggcag ggacgcgacg cggtcgccga ggtcgacttg
      181 tccccggcgg gtcggcaggc cgtcgaggtc gggctgcgcc agatcgaccg gctcaccgtc
      241 gagctcgacc agctcaggcg ccaactggac tggctgtcgc ggcaccagcc cggcgcccga
      301 gcgctgcgcg ccagccaata cggaatcggt ccgatcacct cggtagtgat ctgggccgag
      361 cttggcgatg tgcgccgctt ccgcaactcc accaccgtgg tgcgccacac cggcctcgat
      421 gtcaccgtgc actcctcgga catccaccgg gcggccgggc acctatcccg gcagggcccg
      481 caactgctgc gctgggcgtt gtatgagtcg gccaagtgcg ccgcccgcac caccgcgccg
      541 gaccacgact actaccggac cagcagcgac cggcgcaccg ccggactggc caccatctcg
      601 gtggcccgca agctggcccg ccgctgctac cacaccctgc gcgacctcgg cgaggaggca
      661 ctcgcccccg cggcgtgaac ccacggggtg gttccgcatc atgtgccggc acgcgcccac
      721 caccgatgat catgcggctg gctcctggcc agcgctctgc tgccagcccc cgaaccacgc
      781 tggacagcct ccaaagaatg agcggccgca taccgccccg agtcggggca ccccatcacg
      841 catcatgtga ccgcagcccc ctcctgctgc gcgcaccgag ataagacagg gcgcccgaca
      901 cgccgcctgg aatcccccgc cacacacgca gtctctgcac agccctcaac atgggagaac
      961 gaatcagcgc cgacctgaac gacgaatctc ggcttcctcg ccggagggcg gaatcttcgg
     1021 aggtcgacgg gtcggcgtca aggtcgttcg tccggccggg cgctcc
//
LOCUS       DATIFF010001084         1374 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_906710, whole genome shotgun sequence.
ACCESSION   DATIFF010001084 DATIFF010000000
VERSION     DATIFF010001084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1374
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_906710"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..557)
                     /locus_tag="VLD58_15850"
     CDS             complement(<1..557)
                     /locus_tag="VLD58_15850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55836.1"
                     /translation="MRASHPTLLSIGRSMADHRDAMIQEWADWLSDRVTSAAGIPRQT
                     IERELRLLLDVLIESVGPMRRSVNDIWYHACEHYGRVGAARGLAAGEVVEEIQYLRGI
                     LIRRLGPVLSTLRPRQAMAIILRLNAILDKGVAVAVVGYTDALVATLFSQNGVPAPDT
                     ALDTQDIVKQLGQIEGELAVVVKHR"
     gene            608..>1374
                     /locus_tag="VLD58_15855"
     CDS             608..>1374
                     /locus_tag="VLD58_15855"
                     /inference="COORDINATES: protein motif:HMM:NF014114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HSB55837.1"
                     /translation="MSTAVIRPPRMVPGCRVALVAPAGPLLERDDLTRGAELCRALGF
                     QPVLGANAHRRHGYLAGSDDERLADLNTALADSSIDAIWCLRGGFGITRILDRVDLAA
                     LAEHPKAVIGYSDITALLLALHRVTGVAGFHAPMARTPLTTFSREHFERVLGRATAAG
                     RLGRVPHAAGVLVPRTNRIITIRAGVAQGPLIGGNLSLLSALAGTRYFPNLDGAILFL
                     EDVGEDLYRIDRMLAQLRMMGALDRLAGVVLGQFTEM"
BASE COUNT          212 a          472 c          465 g          225 t
ORIGIN      
        1 taccgatgct tcaccaccac cgccagctct ccctcgatct gtcccagctg cttcacgatg
       61 tcctgggtgt cgagcgcggt atcgggagca ggaaccccgt tctgggagaa cagagtggcg
      121 accagcgcgt cggtgtagcc caccacggcc accgcgaccc ccttgtccag gattgcattc
      181 aggcggagaa tgatggccat ggcctggcgc ggccggaggg tgctgagcac cgggccgagc
      241 cggcggatca ggatgccgcg aagatactgg atctcttcga ccacttcgcc ggcggcgaga
      301 ccgcgcgcgg cgccgactcg gccgtagtgt tcgcaggcgt ggtaccagat atcgttgacc
      361 gaacggcgca tcggccccac cgactcgatc aggacatcga gcaggaggcg cagttcacgt
      421 tcgatggtct ggcggggaat tccggcggcg gatgttaccc ggtcactcag ccaatcggcc
      481 cactcctgaa tcattgcatc gcggtgatcg gccatgctcc ggccgatgga aagcaacgtc
      541 ggatgcgatg cgcgcaagtc tcgggctccc gggttggcgc cgggaccaat ctatactgga
      601 gcggccgatg tcaacagcgg tgatccgtcc tcctcgcatg gttcccggct gccgggtcgc
      661 actggtggcg ccggcggggc cgctgctcga gcgcgacgat ctgacgcggg gcgccgaact
      721 ctgccgcgcg ctgggtttcc agccggtgct cggcgccaac gcccaccggc ggcacggcta
      781 tctcgccggc agcgacgatg agcggctggc cgacctcaac accgcactcg ccgattcgtc
      841 gatcgatgcc atctggtgcc tccggggcgg tttcgggatc acccggattc tcgaccgggt
      901 ggacctggcc gcgctggccg agcaccccaa ggcggtgatc ggctactccg acatcaccgc
      961 gctgctgctg gcgctccatc gagtcaccgg agtcgccggg ttccacgcgc cgatggcgcg
     1021 caccccgctc acgacgttca gccgggaaca cttcgaacgg gtgctcggtc gggccaccgc
     1081 cgcgggacgc ctggggcggg tcccgcacgc tgcgggcgtg ctggtgccgc ggaccaacag
     1141 aatcatcacc atccgcgccg gggtagccca gggtccgctg atcggcggga acctgagtct
     1201 cctgagcgcg ctggccggca cccgctactt ccccaacctc gatggcgcga tcctcttcct
     1261 cgaggatgtg ggcgaggatc tctaccgcat cgaccggatg ctggcccaac tgcggatgat
     1321 gggggcgctc gaccggctcg ccggcgtggt gctgggccag ttcaccgaga tgaa
//
LOCUS       DATIFF010001085         3074 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1525011, whole genome shotgun sequence.
ACCESSION   DATIFF010001085 DATIFF010000000
VERSION     DATIFF010001085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3074
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1525011"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..325)
                     /locus_tag="VLD58_15860"
     CDS             complement(<1..325)
                     /locus_tag="VLD58_15860"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB55838.1"
                     /translation="MTDPATRLTNALSDRYRIDRELGHGGMATVYLAHDLRHDRKVAL
                     KVLKPDLAAVLGADRFVVEIRTTAALQHPHILPLFDSGSADGFLYYVMPFVEGETLRA
                     KLDREG"
     gene            complement(322..2901)
                     /locus_tag="VLD58_15865"
     CDS             complement(322..2901)
                     /locus_tag="VLD58_15865"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WD40 repeat domain-containing serine/threonine
                     protein kinase"
                     /protein_id="HSB55839.1"
                     /translation="MTDISNRLANALADRYRIERELGQGGMATVYLAQDLKHDRKVAI
                     KVLRPELAAVIGADRFLTEIKTTANLQHPHILALHDSGRTVGQSDGRTEEFLFYVMPF
                     VEGESLRDRLNREKQLPIPDAVRIATEVAGALDYAHRHGIIHRDIKPENVLLHDGRAL
                     VADFGIALAASSAGGRMTETGMSLGTPTYMSPEQAMGERTLDARTDVYALGCVLYEML
                     TGEPPFTGPTAQAIVAKVLTDEPRRVSELRRSVPPAVEAAIGTALEKLPADRFGAMAE
                     FAAALQSTGVPARGTAPRRSGWSAPVLITLGVAALALGVALGRLLPRHAEVPAVIGFH
                     PIRLTHSGGVGCAAISPDGREFAAVSGSYSEETRCSGTLLIRAVPSGVDQVVLQWISH
                     VYGIHWNPSATLLLLAGAPEGRSEGLWVLPRGGGAPRQLSTSYPSAFGFLDDQRIFLA
                     GAGGLRIVDARSGETVDSLPGLHVGPREVIEWTPDGTRLVRVAPDVHQGAQVLTAKGT
                     VTDSIPGSVQRASWAGPTRIVYYLNRAFGTGDLMIRDVDPATGRFRGAPSVLWAALPA
                     ITGLSTSRTGGRMMVVVRPVVDEQHVVQTATPGTSRIMVRSLNAYLGDPHLSPDGSRI
                     AYTREDALGFNAYWIAADGGEEHSITGDSVATVNADWLDDHRVVTFTAAGEVGNVDLE
                     TGRARRIETRGPGQLIGIFRDLWLWRAGDTARYVVRDSAGKLVRDLGSAPEVLTPSSQ
                     WQTTPSWFVVAGRTADQRLVLTQFSYASGRWSTPVPLIQSGIRIAGTGEDGAIYLSRF
                     GERTTEIWRSLKGGVPAPYLSLAIHCYNGSVMVSNDGKRIVCNVTTSQPDAWLAELPG
                     GSR"
BASE COUNT          464 a         1059 c         1068 g          483 t
ORIGIN      
        1 ggccctcgcg gtcgagcttg gcccggagcg tctccccctc gacgaagggc atgacgtaat
       61 agaggaagcc gtccgccgag cccgaatcga agagcggaag gatgtggggg tgctggagcg
      121 ccgccgtggt ccggatctcg accacgaacc ggtcggcgcc gaggacggcg gcgagatcgg
      181 gcttgaggac cttcagggcg accttgcggt cgtgacggag gtcgtgggcc aggtagaccg
      241 tcgccatgcc cccgtggcca agctcgcgat cgatccggta gcgatcggag agggcgttcg
      301 tgagccgcgt ggccgggtcg gtcatcggga gccccctgga agctccgcca gccatgcgtc
      361 gggctggctg gtcgtgacat tgcagacaat gcgctttccg tcgttgctca ccatcacgct
      421 gccgttgtag cagtggatcg ccaggctcag gtacggcgcc ggtacgccgc ccttcagcga
      481 gcgccagatc tccgtggtcc gctcgccgaa cctcgagagg tagatcgctc cgtcctcgcc
      541 ggttcccgca atccggattc cgctctggat gagcggcacc ggggtggacc acctgcccga
      601 ggcataggag aactgcgtca gcacgagccg ctggtcggcg gtccggccgg cgaccacgaa
      661 ccaggacggc gtggtctgcc actggctgga tggggtaagc acttccggcg cagagcccag
      721 gtcgcgcacc agctttccgg cagaatcccg gaccacgtaa cgggcggtat ctccggcgcg
      781 ccagagccag agatcgcgaa agatgccgat cagctgcccc ggacccctgg tttcgatccg
      841 ccgcgcgcgc cccgtctcca ggtccacgtt ccccacttct cccgccgcgg tgaaggtgac
      901 gacgcgatgg tcgtcgagcc aatccgcatt gaccgtggcc acgctgtccc cggtgatcga
      961 gtgctcttcg ccgccgtcgg cggcaatcca gtaggcattg aagcccagcg catcctctcg
     1021 ggtgtacgcg atgcgagagc catccgggga gaggtgaggg tcccccaggt aggcattgag
     1081 ggagcgcacc atgatccggg aggtgcctgg cgtggcggtc tggacgacgt gctgctcgtc
     1141 caccaccggc cggaccacga ccatcatgcg gccgccggtc cggctcgtgg agagcccggt
     1201 gatggccggc aaggccgccc acagtaccga gggagcgccg cgaaatcgcc ccgtggcggg
     1261 gtcgacgtcg cggatcatca ggtcgccggt cccgaaggcc cggttcaggt aatacacgat
     1321 tcgcgtgggc ccggcccagc tcgcccgctg cacactgccc ggaatgctgt cggtcactgt
     1381 gccctttgcg gtcagaacct gcgcgccctg gtgcacgtcc ggggcgactc gcaccaggcg
     1441 ggtcccgtca ggagtccatt ctatcacttc acggggaccg acgtggagcc cgggcagcga
     1501 gtccactgtc tctcccgacc gggcatcgac gatgcgcaag cctcccgcgc cggccaggaa
     1561 gatccgctgg tcgtcgagga agccgaacgc gctcgggtag ctggtgctga gctggcgcgg
     1621 tgcgccgccg ccccggggaa gcacccagag cccctccgac cgcccctctg gagcaccggc
     1681 cagcagcagc agggtggccg atggattcca gtggatgccg tagacgtggc tgatccactg
     1741 cagcacgacc tgatccactc cgctcgggac ggcgcggatc agcagcgtcc cgctgcaacg
     1801 ggtctcctca ctgtagctcc cgctcaccgc ggcgaattcg cgtccgtccg gtgagatcgc
     1861 cgcacaaccg acgccgccgg aatgcgtcag gcggatcggg tggaatccga tcacggccgg
     1921 tacttccgcg tgccggggca ggagccgtcc gagggcgacg cccagagcga gcgccgcaac
     1981 gccgagggtg atcagaaccg gcgcggacca accggaccgc cgcggcgccg ttccccgcgc
     2041 cgggacaccg gtggactgca gcgcggcggc aaactccgcc atcgccccaa accggtcggc
     2101 ggggagcttc tcgagggccg tcccgatcgc cgcctcgacg gcgggcggga ccgaacgccg
     2161 gagctccgac acgcgtcgcg gctcgtcggt cagcaccttg gccacgatgg cctgcgcggt
     2221 cggcccggtg aaggggggct cgccggtgag catctcgtag agcacgcatc cgagcgcgta
     2281 cacgtcggtc cgcgcgtcga gcgtgcgctc ccccatggcc tgctcggggc tcatgtaggt
     2341 cggggtgccg agcgacatcc ccgtctcggt catccggccg cccgccgagc tggcggcgag
     2401 cgcgatgccg aagtcggcca ccagtgcccg cccgtcgtgc agcaggacgt tctccggctt
     2461 gatgtcgcgg tggatgatcc cgtgccgatg ggcgtagtcg agggcgccgg ccacttcggt
     2521 ggcgatccgc acggcgtcgg gaatcgggag ctgcttttcc cgattcagcc ggtcccgcag
     2581 cgattccccc tcgacgaagg gcatgacgta gaacaggaat tcctctgtcc ggccgtccga
     2641 ctgtccgact gtccgtccgc tatcgtgcag cgccaggatg tggggatgct gcaggttcgc
     2701 ggtggtcttg atctcggtga ggaagcgatc ggcgccgatg acggcagcga gttcgggccg
     2761 cagcaccttg atcgcgacct tgcggtcgtg cttgaggtcc tgggccaggt acaccgtggc
     2821 catgccgccc tgaccgagct cgcgctcgat ccggtaacgg tcggccagcg cgttcgccag
     2881 gcggttggaa atgtcggtca ttggggcccc cggcccgtgc tgcctcccgt cttcgcgccc
     2941 agccgctccc gcacctcctc gcgccagttg agcaccagga ccttgtcgat cgggttctcc
     3001 gcctggcgaa tcatcaggaa cctcagcccg tcgggggcgg ggtcgtacat gaaatgattc
     3061 tcgtcggcgc tgta
//
LOCUS       DATIFF010001086         1454 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1986242, whole genome shotgun sequence.
ACCESSION   DATIFF010001086 DATIFF010000000
VERSION     DATIFF010001086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1454)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1454)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1454
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1986242"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1444)
                     /locus_tag="VLD58_15870"
     CDS             complement(<1..1444)
                     /locus_tag="VLD58_15870"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HSB55840.1"
                     /translation="MRFLGTHLTLSLLRTYERVGAWGSDMLHIFATDRGGPWLPFGLL
                     FLGMGVTWWRGRRIIAADRAGSIIWPIRGALACAALPLALTLLVYNLPGGHFPRNRVR
                     PEIVTLGLELMSDARPAVAPADFERWSRAWQERWLAGDGSGEWRFAGDPRYPLVRVPL
                     VPATDTVRRNVIYLQLETFRGWDMGFLRPDRPASPTPFLDHLAADSNTAWWSRFLSFG
                     PPTINGFMAGHCSALPHSSQSISTTYTGTSLQCLPAVARAHGWRTAYFTGSDPDWDNQ
                     TIWLRRWYDEVSFYPDANELDRKVFHEALGRIRELGRGTAPFFATVVSISNHYPFRSR
                     EPALDVGPAATPQQAILNTLHYTDDVVREFVDSLSREPWYARTLLVIVGDHGYNLGEH
                     DGTAGQRNGWRESLWVPFLIHGAHPGLNAGRHDEPATQLDLAPTVADLMGIRDTTPWL
                     GRSLLASRPRKAELGVARGEVLFAETPEWSL"
BASE COUNT          230 a          449 c          567 g          208 t
ORIGIN      
        1 ccaggctcca ttcgggggtc tcggcgaaca gcacctcgcc ccgcgccacg ccaagctcgg
       61 cctttcgggg ccgggaagca agcaggctcc gtcccagcca cggggtggta tcccggattc
      121 ccatcaggtc ggcgacggtg ggggccaggt cgagctgcgt ggcgggctca tcgtgccggc
      181 cggcattgag ccccgggtgg gcgccgtgaa tcaggaacgg gacccacagc gattcgcgcc
      241 agccgttccg ctggcccgcg gtgccgtcgt gctcgcccag gttgtagccg tggtctccca
      301 cgatgacgag cagggtgcgg gcataccagg gttcccgcga gagcgagtcc acgaattccc
      361 gaacgacatc atcggtgtag tggagggtat tgaggatggc ctgctggggc gtggcggccg
      421 gcccgacatc gagcgcgggt tcacggctcc ggaagggata gtgattgctg atcgagacca
      481 ccgtcgcgaa gaacggcgcg gttccccggc ccagctcgcg gatccggccc agtgcctcgt
      541 gaaagacctt ccggtccagt tcgttggcgt cgggatagaa gctcacctcg tcgtaccagc
      601 ggcggagcca gatggtctgg ttgtcccagt cgggatcgct cccggtgaag taggcggtgc
      661 gccagccgtg ggcgcgggcc accgcgggaa ggcattgcag cgacgtgccg gtgtaggtgg
      721 tgctgatgct ctgcgaggag tggggcagcg ccgagcagtg cccggccatg aacccgttga
      781 tggtgggcgg gccgaagctc agaaaccggg accaccaggc ggtgttgctg tcggcggcga
      841 ggtggtcgag gaacggcgtc ggcgatgccg gccggtcggg gcggaggaat cccatgtccc
      901 agccgcggaa ggtctcgagc tggaggtaga tgacgttgcg gcgcaccgtg tcggtcgccg
      961 gcaccagtgg cacccgtacc agcggatagc ggggatcgcc ggcaaagcgc cactcgccac
     1021 tgccgtcgcc ggcgagccag cgttcctgcc aggcccggct ccagcgttcg aaatcggcgg
     1081 gggcgacggc ggggcgggcg tcgctcatga gctcgaggcc gagggtcacg atctcggggc
     1141 ggacccggtt cctggggaag tggccgccgg ggaggttgta gaccagcagg gtgagcgcga
     1201 gcggcagcgc ggcgcaggcg agggcgcccc ggatcggcca gatgatgctg ccggcgcggt
     1261 cagcggcgat gatccggcgt ccccgccacc aggtcacacc catcccgagg aagagcagtc
     1321 cgaaggggag ccagggacca ccgcggtcgg tggcgaagat gtgcagcatg tcggagcccc
     1381 aggcgccgac ccgctcgtag gtgcggagga gcgaaagggt gaggtgggtg ccgaggaagc
     1441 gcatcacctc gttg
//
LOCUS       DATIFF010001087         1165 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1370290, whole genome shotgun sequence.
ACCESSION   DATIFF010001087 DATIFF010000000
VERSION     DATIFF010001087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1370290"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..734
                     /locus_tag="VLD58_15875"
     CDS             84..734
                     /locus_tag="VLD58_15875"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HSB55841.1"
                     /translation="MTLDPIAPAVTAYLDALVPTRPRELQAMEAEAAHTGFPIIGPAA
                     GHLCYLLTRLMGAHTVFELGSGFGYSTAWFARGVAENGGGRVYHTVWDQALSDRARRH
                     LGALGLDSMVHYHVGEAVGALREAVGPFDIIFNDIDKTGYPDALPVIREKLRPGGLLI
                     ADNLLWHGRIFDPEDRSAETLGVKAFTEMVAQDTRWTAAIVPIRDGLLVARLDDRA"
     gene            884..>1165
                     /locus_tag="VLD58_15880"
     CDS             884..>1165
                     /locus_tag="VLD58_15880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55842.1"
                     /translation="MAAVRFLTALALFAQPTQPPGFPEPPLKVAVLSIDLNNLHKTTP
                     DTAMAGRIDRLAAALRARLAAACGYQVVGIDSAAEATAHLTDEYFYEHPD"
BASE COUNT          175 a          428 c          357 g          205 t
ORIGIN      
        1 ggccggctca tccgcccgcc tccccctact cggcggctgc cctgtcccct cccagcgcct
       61 ggataccctg acggaggccg gcaatgacac tcgatccgat cgcgccagcg gttaccgcct
      121 atctggacgc gctcgtcccg acgaggccgc gggagcttca ggcaatggag gcggaagcgg
      181 cccataccgg cttccccatc atcgggccgg ccgccggaca cctgtgctac ctcctgaccc
      241 ggctcatggg agcacatacc gtcttcgagc tcgggtcagg gttcgggtac tcgacggcct
      301 ggttcgcccg tggcgtggcc gagaacggcg gcggtcgcgt gtaccacacc gtgtgggatc
      361 aggcgctctc cgaccgggcc cgccgccacc tcggcgcgct ggggctcgat tcgatggtcc
      421 actaccatgt tggagaggct gtcggcgccc tgcgcgaggc cgtcggcccg ttcgacatca
      481 tattcaacga catcgacaag accggctatc ccgatgccct cccggtcatc cgggaaaagc
      541 tccgccccgg cggcctgctg atcgccgaca atctgttatg gcacggccgt atcttcgacc
      601 ccgaggatcg gtcggcggag accttgggtg tgaaggcttt caccgagatg gttgcccagg
      661 atactcgatg gacagccgcc atagtcccga tccgggacgg gctgctggtg gcgagactgg
      721 acgatcgcgc ctgacaggcg attccagccc gcgggccccg cctgcaccga ggcgtcgggt
      781 tgctccggcc cttcgcggct cttactcttg cagtgcggcc aggtggtcgt atcagtcaga
      841 agcctgacag ccggctgtcc tcactcccgc ccggatctcg atcgtggctg ctgttcgatt
      901 cctcaccgcc ctcgcactgt tcgcccagcc cacgcagcca cccggcttcc ctgagccacc
      961 gctgaaggtg gcggtcctgt ccatcgatct caacaacctc cacaagacga cacccgacac
     1021 cgccatggcc ggacgcatcg accgtctcgc ggcggcctta cgcgcccgcc tggccgccgc
     1081 gtgcggttac caggtggtcg gtatcgattc cgctgcggag gcgaccgcgc acctcaccga
     1141 cgagtatttc tatgagcatc ctgac
//
LOCUS       DATIFF010001088         1153 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1370324, whole genome shotgun sequence.
ACCESSION   DATIFF010001088 DATIFF010000000
VERSION     DATIFF010001088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1370324"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..763)
                     /locus_tag="VLD58_15885"
     CDS             complement(<1..763)
                     /locus_tag="VLD58_15885"
                     /inference="COORDINATES: protein motif:HMM:NF013811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55843.1"
                     /translation="MDLGLLHDLAQSNTTKIVLCSLDGLGGLPRPATGKSELETARLP
                     NLHGLAARSACGLLRHVGPGITPGSGPGHLGLFGYDPLQHPVGRGVLEALGIDFHLKP
                     GDVAARGNFCTVDGQGRITDRRAGRIATNLCVELCERLRAIAVDGVEIIIRPVKEHRF
                     VLVLRGDGLSGRLSETDPQALGVSPLPVRALEPSAGRTAAVVNEFVDRARPLLANAAP
                     ANMILLRGFDRQPDIPLFPATFRLRAAAVAAYPMYR"
     gene            complement(764..>1153)
                     /locus_tag="VLD58_15890"
     CDS             complement(764..>1153)
                     /locus_tag="VLD58_15890"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSB55844.1"
                     /translation="KLSDRSRDIIAFMRCTTDHHNLALLRSSAPGFHHGSFEVGGVDE
                     IGMGAAHMADRGWQPGWGFGRHVIGSNFFYYIRDPWGSFAEYFYDLDQIPDSCAWEPR
                     DFPADDSLYIWGPPVPADFGENKEVTA"
BASE COUNT          190 a          370 c          434 g          159 t
ORIGIN      
        1 cccggtacat cggataggcg gcgacggcgg cggcccggag ccggaacgtg gcaggaaaga
       61 gcgggatgtc gggttgccgg tcgaagccgc gcagcaggat catgttggcc ggggcggcat
      121 tcgcgagcag cggccgtgcc cgatcgacga actcgttgac caccgctgcc gtgcggcccg
      181 ccgacggttc cagcgcgcgc acgggcaggg gagacacgcc gagggcctgg ggatccgtct
      241 ccgacagacg gccggagagc ccgtcgcccc gaaggaccag gacgaagcga tgctccttga
      301 ccggccggat gatgatctcg acgccgtcca cggcgatggc ccgcaggcgc tcgcacagct
      361 cgacgcagag gttggtggcg atccggcccg cgcgtcgatc cgtgatgcgc ccctggccgt
      421 ccacggtgca gaagttgccc cgggcggcga cgtcgccggg cttgaggtgg aaatcgatgc
      481 cgagagcctc caggacgccc cgccccaccg ggtgctggag gggatcgtag ccgaagagcc
      541 cgaggtggcc cggcccgctg ccgggcgtga tcccgggccc gacgtggcgg agcaggccgc
      601 aggcggagcg ggcggccagc ccgtgaagat tcggcagccg cgccgtctcg agctcgctct
      661 tgccggtggc tgggcgcgga agacctccga gcccgtcgag agagcagagc acgatcttgg
      721 tggtgttgga ctgggcgaga tcgtggagga gcccgagatc catctaggcg gtgacttcct
      781 tgttctcccc gaagtcggcg ggaacggggg ggccccagat gtagagcgag tcgtcggcgg
      841 ggaaatcccg cggctcccac gcgcagctgt ccgggatctg gtcgaggtca tagaagtact
      901 cggcgaagct gccccacggg tcacggatgt agtagaagaa gttcgatccg atcacgtgcc
      961 gcccgaatcc ccacccgggc tgccagccgc gatccgccat gtgcgccgcc cccatgccga
     1021 tctcgtcgac gccgcctacc tcgaacgagc cgtggtggaa gccaggggcg ctcgacctga
     1081 gcagagccag gttgtgatga tcggtggtgc agcgcatgaa cgcgatgatg tcacgggagc
     1141 ggtcggagag ctt
//
LOCUS       DATIFF010001089         1584 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_755142, whole genome shotgun sequence.
ACCESSION   DATIFF010001089 DATIFF010000000
VERSION     DATIFF010001089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_755142"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..940)
                     /gene="selA"
                     /locus_tag="VLD58_15895"
     CDS             complement(<1..940)
                     /gene="selA"
                     /locus_tag="VLD58_15895"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004125 - L-seryl-tRNA(Sec) selenium
                     transferase activity [Evidence IEA];
                     GO_process: GO:0016260 - selenocysteine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HSB55845.1"
                     /translation="MSDPRRRLPSVDRLLNDPAIAALAAHAPRNALVAAVRESLERAR
                     RSRSGPPPDWAADVTERLARGTARSLRPVINATGVVLHTNLGRAPLARVALDAIREVA
                     QGYSALEYDLGSGIRGHRADHCRRLLAELTGAADALAVNNAAGALVLALNATAAGGRV
                     IISRGELIEIGGSFRIPEILEKSGATLVEIGTTNRTYLDDYRRALDPASVLLTVHRSN
                     FEQRGFVTSPAPSELAQLAREHGVPYIYDVGSGLLADLSDAGLTGEPRVQDGIAAGAD
                     LVIFSGDKLLGGPQAGCLVGRADLIDAFRRNPFARAL"
     gene            complement(937..>1584)
                     /locus_tag="VLD58_15900"
     CDS             complement(937..>1584)
                     /locus_tag="VLD58_15900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55846.1"
                     /translation="RISQVSQNDSLSATVSFNSPLAPGQRFDSTNVVLRLQRDSSIIP
                     IRSVLPRELDDSLQKIARATADSLRVERDTTILDSVKRARLRPPPVSKAPALGQRQGR
                     PGRVDSEADSIIKSRPRLIPSLVIRVDSAWVPETKYLIEVTGVKSAAGVPGTSKSVLA
                     IPKRVVPPARDSLKVTRDSLKTARDSLKVQRDTLKADTAGARPIIKKPFKKPATP"
BASE COUNT          238 a          508 c          597 g          241 t
ORIGIN      
        1 ggagcgcccg cgcgaaggga ttgcggcgga aggcgtcgat cagatcggcc cgcccgacga
       61 ggcagccggc ctgcggcccg cccaggagct tgtcgcccga gaagatcacg aggtcggcgc
      121 cggcggcgat cccgtcctgc acccgtggct cacctgtgag cccggcatcg gacagatcgg
      181 cgaggagacc gctccccaca tcgtagatgt acggaacgcc gtgctcccgc gcgagttggg
      241 ccagctccga cggagcaggg gaggtgacga atccgcgctg ctcgaagttg gagcggtgta
      301 ccgtgaggag caccgaagcc ggatccagcg cccggcggta gtcatcgagg taggtgcggt
      361 tggtggtgcc aatctccacc agtgtggccc cgctcttctc cagtatctcg gggatccgga
      421 acgacccacc gatctcgatc agctctcccc gggagatgat cacccgtccg ccggccgctg
      481 tggcgttgag ggccaggacc agtgcacccg ccgcgttgtt gaccgccagg gcatcggcgg
      541 cgccggtcag ctcggccaac agtcgccggc agtggtcggc ccggtgaccc cggattccgc
      601 tgccgagatc gtactcgagc gcgctgtagc cctgggccac ctcccggatg gcgtcgagcg
      661 cgacgcgggc gagcggagcg cggccaaggt tggtgtggag caccacaccg gtggcattga
      721 tgacggggcg aagcgaacgg gcggtgccgc gggccagccg ctccgtgacg tcggcggccc
      781 agtccggcgg cggaccggag cggctccggc gggcgcgctc gagcgattca cggaccgccg
      841 ccaccagcgc attgcgggga gcgtgggctg ccagcgcggc gatggcgggg tcgttgagca
      901 gccgatccac cgagggaagg cggcggcgcg ggtcgctcac ggggtagccg gtttcttgaa
      961 cggcttcttg atgatcggtc gggcgccggc agtgtcggcc ttgagagtgt cccgctggac
     1021 cttgaggctg tcgcgcgcgg tcttgagact gtcgcgcgtc accttgaggc tgtcacgggc
     1081 cggaggcacc acccgcttgg gaatggccag gacactcttc gaggtgccgg gcacgccggc
     1141 ggcgctcttc acgccggtga cttcgatcag gtacttggtt tctggcaccc aggccgagtc
     1201 gacccggatc accagagaag ggatcaggcg gggccgcgac ttgatgatgg aatcggcctc
     1261 ggagtcgacc cggccaggcc gcccctgacg ctgtcccaga gccggcgcct tgctgacggg
     1321 cgggggccgg agccgggccc gtttgaccga atcaagaatg gtggtgtcgc gctccacccg
     1381 aagcgagtcg gcggtggcgc gggcgatctt ctggaggctg tcatcgagtt cccgcggcag
     1441 caccgagcgg atggggatta tcgacgaatc gcgctggagc cgcagcacca cattggtgct
     1501 gtcgaagcgc tggcccggcg cgagggggct gttgaagctg acggtggcgc tcaggctgtc
     1561 gttctgggac acctgcgaaa tgcg
//
LOCUS       DATIFF010001090         2372 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2293937, whole genome shotgun sequence.
ACCESSION   DATIFF010001090 DATIFF010000000
VERSION     DATIFF010001090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2372
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2293937"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            181..1785
                     /locus_tag="VLD58_15905"
     CDS             181..1785
                     /locus_tag="VLD58_15905"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HSB55847.1"
                     /translation="MTATADLYRSYLDLRWHFDPAAATAAGVKGHDGQLGDFSVERMR
                     EHLVAFKAIASAVEQLDIEDQEEEIDRTAFLDEVRIRIARFEKERPHVHDPGFWLSHL
                     YRGFHSILRLRDGDARAQAAGLLGRLKATPDFLKGARATIQDPPRIFLDTASALADAG
                     PRLLADAADAIRGAAPELAEATEDALGEAESALSRFALALRGDFRAHHDDLSFAIGEE
                     QFNRRLHHEHALRAGAPELYRYGLHLADEVAHEVEQLARQLNPTASWRTVVEKLRAQS
                     PVNSDLVPAFQSTVGRARQFLEQRSLVTIPEGQLDVIETPAFLRPLMPFAAYSPPAVY
                     SPDPVGTFYVTSPGSGAGPGQHSLYEIGPTAVHEAWPGHHLQMLAARTAGSEVRRVSW
                     TPVTVEGWALYCEELMAEQGFFTTVEERLFQRLHLLWRAVRVVLDIGLHTRGMTPDQA
                     VDMLVDRVAMDRGKAQAEVSRYCAWPTYQLCYAVGRRELLHLRDAWRASVGRSAPIRQ
                     FHDAVLNYGGLPVSLVRWGMGLGIDE"
     gene            1919..>2372
                     /locus_tag="VLD58_15910"
     CDS             1919..>2372
                     /locus_tag="VLD58_15910"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSB55848.1"
                     /translation="MVYPLLPAFVVGTLGGSAATLGLLDGAADLTAAATKWLSGDLAD
                     RPRWRKPLIVVGYLSAILIRPFMAAASAAWQVVSFRVIDRVGKGLRTPARDAYIADAT
                     DPALQGRAFGFHRAADHFGSIPGALLAWWLLRHSVDVRQVLTWSIVPGV"
BASE COUNT          341 a          806 c          846 g          379 t
ORIGIN      
        1 cgctggaggc aggcaccagg gtggtgaaca gccacctgga acagaccctg gtcggcgcga
       61 agtgctcgat cagcgacagc cagctgcggc aatcgatgct gggcgaccgg gtgatggtga
      121 aagggctcaa gggtgcagtc acgctcggag acgacagcga ggtcctagcc tcgtgaccag
      181 atgaccgcga ccgccgacct ctatcgttcc tatctcgatc ttcgctggca tttcgacccc
      241 gccgcggcca ctgccgcggg ggtgaagggt cacgacggcc agctgggcga tttctcggtg
      301 gagcggatgc gggagcacct ggtcgcgttc aaggcgatcg cgagcgcggt ggagcagctc
      361 gatatcgagg accaggagga ggagatcgac cgcaccgcct tcctggacga ggtgcggatc
      421 cggatcgccc ggttcgagaa ggagcggccc cacgtgcacg acccggggtt ctggctctcc
      481 cacctctacc gcggcttcca ctcgatcctc cggctccgcg acggcgacgc ccgcgcccag
      541 gcggcgggac tgctcggccg gctcaaggcc acgcccgact tcctgaaggg cgcgcgggcc
      601 acgattcagg acccgccccg gatcttcctc gacaccgcgt cggccctggc cgacgccggt
      661 ccccggctcc ttgccgacgc ggccgacgcg atccgcggcg cggcgcccga gctggcggaa
      721 gccaccgagg atgccctggg cgaggccgag tcggcgctca gccggtttgc cctggcgctc
      781 aggggggatt tccgggccca ccacgacgac ctctcgttcg ccatcggcga ggagcagttc
      841 aaccgccgcc tgcatcacga gcacgccctc cgggccggcg ccccggaact gtaccgctac
      901 ggtctccacc tggccgacga ggtggcgcac gaggtggagc agctggcccg tcagctcaat
      961 ccaaccgcct cctggcgaac cgtggtcgag aagctccggg ctcagtcccc cgtcaacagc
     1021 gacctggtgc cggcgttcca gtcgacggtc gggcgggcgc ggcagttcct ggagcagcgc
     1081 agcctggtga cgattcccga gggccagctc gacgtgatcg agacgccggc cttccttcgt
     1141 cccctgatgc cgttcgcggc ctattcgccg cccgcggtct acagtcccga tccggtaggg
     1201 accttctacg tcacctcgcc cggctcgggt gcgggcccgg gccagcactc gctgtacgag
     1261 atcggcccaa ccgcagtgca cgaggcgtgg cctggccacc acctccagat gctggcggcg
     1321 cggaccgcgg gctccgaggt gcggcgggta agctggacac cggtgacggt cgaagggtgg
     1381 gcgctctact gtgaagagct gatggcagag caggggttct tcaccacggt cgaggagcgg
     1441 ctcttccagc ggctccacct gctgtggcga gccgtgcggg tggtgctcga catcggtctc
     1501 catacccggg gcatgacgcc ggaccaggcg gtcgacatgc tggtggaccg ggtggcgatg
     1561 gatcggggca aggcccaggc ggaggtgagc cgctactgcg cctggccgac ctatcaactc
     1621 tgctacgcgg tggggcggcg ggagctgctc catctgcggg acgcctggcg cgcctcggtg
     1681 ggcaggtccg ctccgatccg tcagttccac gatgcggtgc tcaactacgg cggcctgccg
     1741 gtctcgctgg ttcgatgggg gatggggctc ggcatcgatg agtaaggcgg caaggcggca
     1801 gggcggcagg gcggcaggca cagaagacct tcccagtggc gcgaagcaac cgaccggcat
     1861 tcctccgacg gtcaagggtc tctcgctggt ctcgctgttc aatgacttcg ccagtgaaat
     1921 ggtatatccg ctcctccccg ccttcgtggt tgggacgctg ggcgggtcgg ccgcgaccct
     1981 tggactcctc gatggggccg cggacctcac cgccgccgcc accaagtggc tgagcggcga
     2041 cctggccgac cggccccggt ggcgcaagcc gctgattgtg gtcggctacc tctcggcgat
     2101 cctcatccgg ccgttcatgg ccgccgcttc ggcggcatgg caggtggtga gcttccgggt
     2161 gatcgaccgg gtgggcaagg gactgcggac gccggcccgc gatgcctaca tcgccgatgc
     2221 gaccgatcct gcgctccagg ggcgcgcgtt cggttttcat cgggcggccg atcacttcgg
     2281 ctcgattccc ggggcgctcc tggcctggtg gctgctgcgg cactcggtgg atgtgcggca
     2341 ggtgctgacc tggagcatcg tgcccggggt ta
//
LOCUS       DATIFF010001091         4212 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_295071, whole genome shotgun sequence.
ACCESSION   DATIFF010001091 DATIFF010000000
VERSION     DATIFF010001091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4212
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_295071"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..767
                     /locus_tag="VLD58_15915"
     CDS             <1..767
                     /locus_tag="VLD58_15915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55849.1"
                     /translation="RTRDMPVYGPSFGRAGNAPGVGAMSQWMDFGNIHPYPGGLMPLS
                     NVRDHQSKVRGPVGTHPIVVTETGYHTALQWKGDHPGVSEQAMAHYVPRLFLDYYAAG
                     IPRTYLYEFVDEGTDPAQREQNFGLLRADGSEKPAYASLKNLIGLLKDPGPAFTPGQL
                     EYGVEGDTTGVNVMLFQKRDRRFYLAVWQEVPSYDQAAKIEARVDDRKLRIQLGQAGH
                     LKVYLPVKSAEPALELDGSTVDLSVPDSPVIVEIAA"
     gene            complement(771..1892)
                     /locus_tag="VLD58_15920"
     CDS             complement(771..1892)
                     /locus_tag="VLD58_15920"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB55850.1"
                     /translation="MKVALAHDYLIQAGGAERVVAALHRIFPEAPIFTTIADPSVTES
                     LLPDARICTSWMQRLPGLRKHFRKYVLLYPSAIESLDLSGFDLVISSSSAFAKGVVTD
                     PGAFHLCYCHTPMRFGWNAGGYAEREEWGKAVRWILPQVTGRLRRWDQRTASRVDLYV
                     ANSSVVAERIERCYRRPARVIHPPVEVDRITPGGTKGDFFLVVSRLVAYKRVDLAIEA
                     FTRMGRPLVVIGDGPARVALERLAGPTIRFLGRQSDAEVAAYLAACRALIFPGEEDFG
                     IVPLEANAAGRPVIAFEAGGALDTVIPGKTGIFFERQSAEALSDAVEQCENSIWDPAV
                     IREHAETFREEVFRERIVELVREVGDLKRHQPYPIRAIA"
     gene            complement(1889..3043)
                     /locus_tag="VLD58_15925"
     CDS             complement(1889..3043)
                     /locus_tag="VLD58_15925"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSB55851.1"
                     /translation="MMSRILFLDHVGALGGAELALLDVARAYRETCVFMLFSDGPFRD
                     RLTEAGVRVEILEGGRALHAVRRETRFPGLGAGAQVARLAWQVARRARDFDVIHANSQ
                     KAFVVACVAGVIARRPVIWDLNDLLLPEHFSRTNIWIDVLLANHLAVRVIANSQASAD
                     ALVHQGGDGRKVRVVYNGLDPAPFDAISDREVAALRADLGLEGVPLVGLFGRLAEWKG
                     QHVALEAVATLPGVHLLLVGDALFGEQLYADRLHGQAARLGIGERVHFLGFRPDIPAL
                     MRLVDVVVHTSTAPEPFGRVIVEGMLARRPVVATRAGGVREIMADGQTGILVPPGDAD
                     ALAKAINELILDKGRANRLAVAGRTHAEERFTVDAMVQAMSRNMEEVARA"
     gene            complement(3040..>4212)
                     /locus_tag="VLD58_15930"
     CDS             complement(3040..>4212)
                     /locus_tag="VLD58_15930"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSB55852.1"
                     /translation="RRPGGDVPMIATDTLHTLQVGKGWFPEQSGGLNRYYHELLRHLP
                     PMGVEVTGLVAGSGFVTSQSSGVVRSFAPSDASLPARLNQVRREVQRELRDNPSSLFV
                     THFALYAAPCLDLLREHPVVVHFHGPWAAESRTEGAGALATGLKHWLERAVYRRGSRY
                     IVLSNAFGRLLSRGHGVSPDLIRVIPGGVDTTRFAPAHTREDARALLGWPADRPIALV
                     VRRLVRRMGLEDLISAVRLARRAVPDLLVIIAGSGPLRDELTRRAADIAENVRLAGYL
                     PDSDLPLAFRAADFSVVPSVALEGFGLIVAESLAAGTPVLVTNVGGLPETLAGFAEAC
                     VIRDRSQAGLAAAISDAVHGRLPLPSADACVRHARQSFDWTVVASRVRDVYAEAAA"
BASE COUNT          738 a         1464 c         1413 g          597 t
ORIGIN      
        1 cccgcacccg ggacatgccg gtctatggcc ccagcttcgg ccgggccggg aacgcccctg
       61 gcgtcggtgc catgagccag tggatggact tcgggaacat tcacccgtat cccggcggtc
      121 tcatgccgct cagcaacgtc cgcgatcacc agagtaaggt ccgggggccg gtgggaacgc
      181 acccgatagt ggtcacggag accgggtacc acaccgcact acaatggaaa ggggatcacc
      241 cgggggtgtc ggagcaggcc atggcacact acgtcccccg gctcttcctc gactactacg
      301 ccgccggtat tccccgcacc tacctctacg aattcgtgga tgagggaact gacccggccc
      361 agcgggagca gaacttcggc ctgctgcgcg cggatgggag cgaaaagccc gcctatgcct
      421 ccctcaagaa cctgatcggg cttctcaagg acccgggtcc cgcgttcacg ccgggccagc
      481 tcgagtacgg agtcgagggt gacacgaccg gcgtcaacgt gatgctgttc cagaagcgtg
      541 accggcgatt ctacctggcg gtctggcagg aagtgccgag ctacgatcag gccgcgaaga
      601 tcgaggctcg ggtcgatgac cggaagctgc gcatccaact cggccaggcc ggccacctca
      661 aggtctacct gccggtcaag tcggccgaac cggcgctcga gctcgacggc tcgaccgtgg
      721 acctcagcgt gcccgacagc ccggtgattg tcgagatcgc tgcctagggc tcaggcgatg
      781 gcgcggatcg gatagggctg gtgccgcttg agatcgccga cctcgcgcac cagctccacg
      841 atccgctccc ggaagacctc ctcgcggaag gtctccgcgt gctcccggat gaccgccgga
      901 tcccagatgc tgttctcgca ctgctcgact gcatccgaga gggcttcggc gctctgccgc
      961 tcgaagaaga tcccggtctt ccccgggatg accgtgtcga gcgcgccgcc agcctcaaac
     1021 gcgatcaccg ggcggccggc cgcgttggcc tcgagcggca cgatgccgaa gtcttcttct
     1081 cccgggaaga tcagtgcacg gcaggccgca agataggcgg ccacctcggc atcggactgg
     1141 cgccccagaa agcgaatggt gggccccgcc agtctctcga gcgcaaccct ggccggcccg
     1201 tcaccgatca ccacgagcgg ccgccccatc cgggtaaacg cctcgatggc aagatccacc
     1261 cgcttgtagg ccaccagccg cgatactacc aggaagaaat cgcccttcgt gccaccggga
     1321 gtgatccggt cgacctcgac cggggggtgg atcacccgcg ccggccggcg gtagcatcgc
     1381 tcgatccgct cggctacgac actggagttc gcgacataca gatccactcg cgacgcggtc
     1441 cgctggtccc agcgccggag ccggccggtg acctgcggca ggatccagcg taccgccttg
     1501 ccccattctt cccgttcggc gtatccgccc gcattccagc caaaccgcat cggcgtgtgg
     1561 cagtagcaga gatggaacgc gcccgggtcg gtaaccacgc ctttggcgaa tgcactgctc
     1621 gagctgatga ccaggtcgaa ccccgagagg tcgaggcttt cgatcgcgga gggatagagg
     1681 agcacatact tccggaagtg cttcctgagg ccgggcaacc gctgcatcca tgaggtacag
     1741 atgcgggcgt cggggaggag cgattcggtg accgaggggt ccgcgatcgt ggtgaagatg
     1801 ggcgcctcgg gaaagatccg gtgcagtgcc gccaccaccc gttccgctcc tcccgcctga
     1861 atcaggtaat cgtgcgccaa tgccaccttc atgcccgggc aacctcttcc atgttgcgcg
     1921 acatcgcctg caccatcgcg tcgaccgtaa aacgttcctc ggcgtgagtc cgtcctgcga
     1981 ccgccagccg gttggcccgt cccttgtcga gaatcagttc gttgatggcc ttggccaggg
     2041 catcggcgtc gcctggaggc acgaggatgc ccgtctggcc atcggccatg atttcccgca
     2101 caccacctgc gcgcgtcgcc acgaccgggc ggcgggccag catcccttcc acgatcacgc
     2161 ggccgaaggg ctcgggcgcg gtggaggtgt gaaccaccac gtcgaccagc cgcatcagcg
     2221 ccgggatgtc gggccggaag cccagaaagt ggacccgttc gccgatgccg agcctggcgg
     2281 cctggccgtg caggcggtcg gcgtagagtt gctcgccgaa cagcgcgtca ccgaccagca
     2341 gcagatgcac gccgggcagc gtggcgaccg cctcgagggc gacgtgctgt cccttccact
     2401 ctgcaaggcg gccgaagaga ccgacgagtg ggacgccctc gagaccgagg tccgcccgga
     2461 gggccgccac ctcgcgatcg gatatggcat cgaacggagc gggatcgagc ccattgtaga
     2521 ccacccggac cttgcgcccg tcgccgccct ggtggacgag ggcgtcggcg ctggcctgag
     2581 agttggcgat gacccgtacg gcaaggtgat tcgccagcag cacgtcgatc cagatgttgg
     2641 tgcggctgaa gtgctccggc aacagaagat cgttgaggtc ccagatcacc ggccgccgtg
     2701 cgatcacgcc cgccacgcag gccaccacga aggccttctg cgaattcgcg tggatcacgt
     2761 cgaaatcgcg ggcccgccgc gcgacctgcc aggccagccg cgccacctgg gcgccggcgc
     2821 ccagaccggg aaagcgggtc tcccgccgca cggcgtgcag ggcgcggcca ccctcgagga
     2881 tctcgacccg cactccggcc tcggtcagcc ggtcgcggaa cggaccgtcg gagaagagca
     2941 tgaacacgca ggtctcgcgg taggcccgcg ccacgtcgag cagggcaagc tcggcgccgc
     3001 ccagcgcgcc cacgtggtcg agaaagagaa tccgcgacat catgcggcgg cctcggcgta
     3061 gacatcgcgc acccgcgagg ccaccaccgt ccagtcgaaa ctctggcggg cgtggcggac
     3121 acaggcatcg gcggatggaa gcggcaggcg tccgtgcacc gcatcactga tcgcggccgc
     3181 caggccagcc tgactccgat cgcggatgac acaggcttcg gcgaacccgg cgagcgtctc
     3241 cggcaacccg cctacgttgg taaccagtac gggggtgccc gccgcaagcg actcggcgac
     3301 gatcaggcca aagccctcga gcgccaccga cggcaccacg gagaaatcgg cagcccggaa
     3361 tgcgagcggg agatcactgt cgggcaggta gccggccagc cggacattct cggcgatatc
     3421 ggcggcacgc cgggtcagct catcccggag gggcccgctc ccggcgatga tcaccaggag
     3481 atcgggtacc gcgcggcggg cgagccgcac cgcagagatc aggtcctcga gtcccatccg
     3541 ccgcaccagc cgccgcacga ccagggcaat cggccggtcg gccggccaac cgagcagggc
     3601 ccgggcatcc tcgcgggtgt gcgccggggc aaagcgggtg gtgtcgactc cgccgggaat
     3661 gacccggatc aggtcgggcg agacgccgtg cccccgcgag agcagccggc cgaatgcgtt
     3721 cgacagcacg atgtaacggc tccccctccg gtacaccgcg cgttcgagcc agtgcttgag
     3781 acccgtggcc agcgcacccg ccccttcggt gcggctctcc gccgcccagg gcccgtggaa
     3841 gtgcaccacc accggatgct cgcgcagcag gtcgaggcag ggcgcggcgt agagtgcgaa
     3901 gtgggtgacg aagagactcg aagggttgtc gcggagttcc cgctgtacct cgcggcggac
     3961 ctgattgagc cgggccggga gactggcgtc gctcggcgcg aaggagcgca ccaccccgga
     4021 ggactgcgag gtgacgaacc ctgagcccgc caccagcccc gtgacttcga cccccatcgg
     4081 ggggagatgg cggagcagct cgtggtagta gcggttgagg ccgcccgact gctccgggaa
     4141 ccaacccttc ccgacctgga gcgtgtgcag cgtgtcggtc gcgatcatag ggacatcacc
     4201 tcctggccgt cg
//
LOCUS       DATIFF010001092         1112 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1370992, whole genome shotgun sequence.
ACCESSION   DATIFF010001092 DATIFF010000000
VERSION     DATIFF010001092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1370992"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..563)
                     /locus_tag="VLD58_15935"
     CDS             complement(<1..563)
                     /locus_tag="VLD58_15935"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HSB55853.1"
                     /translation="MSRFRCSSTPSRSAPGRTLRSSLRRPLLLTGAGAVGLVLTGAAG
                     GLDVAHFFLVLAAILVAAKLFGELAERIGQPAVLGELVAGVLLGASALGVVPADGTEA
                     ELIHVLAELGVLLLLFEIGLETDLREMFRVGAASLSVATVGVVLPFALGYLFWRYAPH
                     SMTGGDIGTAAIFVGATLTATSVGITAR"
     gene            complement(499..852)
                     /locus_tag="VLD58_15940"
     CDS             complement(499..852)
                     /locus_tag="VLD58_15940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55854.1"
                     /translation="MVSLPRERGGGSNLGCLLSLLLFVAALYYGVHVGEVYLRYYRLL
                     DAMRFQASIAPSNTDEVIKRRLMATADSILGQAPAFRIERAGRVTITTEYTDSVALPL
                     FKHAFPFRPRADAPL"
     gene            complement(846..>1112)
                     /locus_tag="VLD58_15945"
     CDS             complement(846..>1112)
                     /locus_tag="VLD58_15945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55855.1"
                     /translation="GTITRYEPDLPVAYAGEEGRTPTVTRRLVQITVSVEILDQRAGK
                     PLWQRSGLLLEGDYEPGRGGETDGRQKALDRLVTNIVEGAQSQW"
BASE COUNT          190 a          372 c          408 g          142 t
ORIGIN      
        1 cgcgcggtga tgccgaccga ggtggcggtg agcgtggcgc cgacaaagat ggcggcggtc
       61 ccgatgtcgc ccccggtcat ggaatgggga gcgtagcgcc agaagaggta gcccagggcg
      121 aaggggagga cgaccccgac cgtggccacc gagagcgagg cggccccgac ccggaacatc
      181 tcccgcagat cggtctcgag gccgatctcg aacaggagca ggagcacccc cagctcggcc
      241 aggacgtgga tcagctccgc ctcggtgccg tcggccggaa ccaccccgag ggcgctggca
      301 ccgagcagga cacccgccac cagctccccc aggacggcgg gctgaccgat ccgctcggcg
      361 agctcgccga acagcttggc ggcgacgagg atggcggcga gaaccaggaa gaaatgagcg
      421 acatcgagtc cgccggcggc gccggtgagg acgagcccga cggcgccggc cccggtcagg
      481 agcagggggc ggcgcaggct agagcggagc gtccgcccgg gggcggaacg ggaaggcgtg
      541 cttgaacagc ggaagcgcga cactgtcggt gtactcggtc gtgatggtga cccgacccgc
      601 ccgctcgatg cggaaggccg gtgcctggcc gaggatcgag tccgccgtgg ccatgagccg
      661 gcgcttgatc acctcgtcgg tgttcgacgg cgcgatgctg gcctggaagc gcatcgcgtc
      721 gaggagacgg taataccgga ggtacacttc cccgacgtgc accccatagt agagggcggc
      781 cacgaagagc aacagggaca ggagacagcc gaggttgctt cccccgcccc gttcgcgcgg
      841 caagctcacc attgggactg ggccccttcc acgatgttgg tgaccaggcg atcgagcgcc
      901 ttctggcgtc cgtcggtttc ccccccccgg cccggctcgt agtcgccttc gagcagaagt
      961 ccgctccgct gccagagcgg cttgccggcg cgctgatcca gaatctccac cgacacggtg
     1021 atctgcacca gccggcgggt gaccgtgggg gtgcgtccct cctccccggc gtaggcgacc
     1081 gggaggtcgg gctcgtaccg ggtaatggtt cc
//
LOCUS       DATIFF010001093         1096 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1678184, whole genome shotgun sequence.
ACCESSION   DATIFF010001093 DATIFF010000000
VERSION     DATIFF010001093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1678184"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            36..>1096
                     /locus_tag="VLD58_15950"
     CDS             36..>1096
                     /locus_tag="VLD58_15950"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB55856.1"
                     /translation="MNDAEGIRNLVGTGLVQLVGGLITALIALGVLFYLNWHLTVLSI
                     LVLGVFGGGLAYAFTKLRPLFRERSKINAEVTGRLAETLGGIRVVKAYHAERAERLVF
                     TKGVNKLFRNIAATMTGISAVGGFSALVIGVIGVIMILVGGHAVVAGTMTLGDLVMYL
                     LFTGMMAAPVIQIASIGTQITEAFAGMDRIREVRSQITEDAGDAARQPLGEVRGEVEF
                     EDVTFAYKPGVDVLKHVSFRAPAGSTTALVGSSGSGKSTLIGLVMAFSRPRTGRVLVD
                     GRDLDTVPLRDYRTQLGVVLQDNFLFDGSIADNIRFARPHATSAEIQAAARIAHCDQF
                     IGEFEHGYDTVVGERGVKLS"
BASE COUNT          168 a          331 c          404 g          193 t
ORIGIN      
        1 attccaccaa gaccggtgtg ctgatctcac gggtcatgaa cgacgccgaa gggatccgga
       61 acctggtggg gacggggctg gtgcagctgg tgggcgggtt gatcacggcc ctgatcgcgc
      121 tcggcgtcct gttctatctg aactggcatt tgacggtgct gtccatcctg gtgctcgggg
      181 tgttcggcgg cggcctcgcg tatgcgttca cgaagctgcg gccgctcttt cgggagcgct
      241 ccaagatcaa cgccgaggtg accggccgcc tggcggagac gctgggcggg atccgcgtcg
      301 tgaaggccta tcacgccgag cgggcggagc gcctggtgtt cacgaagggc gtgaacaagc
      361 tattccgcaa tatcgccgcc accatgaccg ggatctcggc agtgggcggg ttctccgcgc
      421 tggtgatcgg cgtgatcggc gtgatcatga tcctggtggg cgggcatgcg gtggtggccg
      481 ggacgatgac gctgggcgac ctggtgatgt acctgctgtt caccgggatg atggcggcgc
      541 cggtcattca aatcgcctcc atcgggacgc agatcaccga ggcgttcgcg gggatggacc
      601 ggatccgcga ggtccgctcc cagatcaccg aggacgcggg cgatgccgcc cggcagccgc
      661 tgggcgaagt ccgcggcgag gtcgaattcg aggatgtgac cttcgcgtac aagccgggcg
      721 tggacgtgct caagcacgtg agcttccgcg cgcctgccgg ctcgaccacg gcgctggtgg
      781 gctcctcggg ctccggcaag agcacgctga tcggcctggt gatggcgttc agccggccgc
      841 ggacgggccg ggtgctggtg gatggccgtg acctcgacac cgtgccgctg cgggattacc
      901 gcacgcagct cggtgtggtg ctccaggaca acttcctgtt cgacgggtcg atcgcggaca
      961 acatccgttt cgcgcggcca catgcgacca gcgccgagat ccaggccgcc gcccgcatcg
     1021 cgcactgcga ccagttcatc ggggaattcg agcacggata cgataccgtg gtgggggagc
     1081 ggggggtgaa actctc
//
LOCUS       DATIFF010001094         3898 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1987130, whole genome shotgun sequence.
ACCESSION   DATIFF010001094 DATIFF010000000
VERSION     DATIFF010001094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3898
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1987130"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..659)
                     /locus_tag="VLD58_15955"
     CDS             complement(<1..659)
                     /locus_tag="VLD58_15955"
                     /inference="COORDINATES: protein motif:HMM:NF013328.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase family
                     protein"
                     /protein_id="HSB55857.1"
                     /translation="MPELPEVETMVREVRPALVGRRIATAALSHIDVLRGVTRPRLLK
                     VLTGAPIHDVTRRAKHAVIHLDEHRFVLQPGMTGNLLIYDRELTPAESRYAVLRTRLD
                     NGSAFVFRDVRRLGTLLLLNDRQWESYDRALGPEPLDPALTPERFEEDLRRSNQAIKK
                     VIMDQRKLVGVGNIYANEALFAAGIDPSKPASRVPSDAWRRLYHHVRRILQAAIDSEG
                     TT"
     gene            658..1353
                     /locus_tag="VLD58_15960"
     CDS             658..1353
                     /locus_tag="VLD58_15960"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HSB55858.1"
                     /translation="MRRKLATTASRLERPTLEESELFRELAVETRRVLARGAVIREAE
                     PGTVLFHAGAPVRGLILILAGTVRVVSERQGRQHLVHESGPGETLGEVPLFSGGGYPA
                     TAVAQTRCVYAVLAPEVLLQAMQRDAALAWLLLRRLAGRVRHLVELLERNTVWSVESR
                     LAEVLLRRQEAAGTASFALGMTQHALAEELGTVREVLVRELAAFCRDGLVRRERRGYY
                     RVIDAEALRRRAM"
     gene            1419..1940
                     /locus_tag="VLD58_15965"
     CDS             1419..1940
                     /locus_tag="VLD58_15965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55859.1"
                     /translation="MVRYLWAGLLVAAAPPMRAQDSGGMDHSHMDHAAHHRAMTDSAF
                     QALQQRGGVYMGVDQTRSAHRFDSLDDGGRIELVSTTGDSADVAAIRRHFQVIAGQFR
                     QGDFTTPFAVHADTVPGTKVMRERRAAISYDMSEVPGGAQLRLKTADQMAIAAIHQFM
                     AYQRAEHHSPGQE"
     gene            complement(2038..3495)
                     /locus_tag="VLD58_15970"
     CDS             complement(2038..3495)
                     /locus_tag="VLD58_15970"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSB55860.1"
                     /translation="MTQSSPVSPLDFGAAGWNEHLLDLLPVAVCRWDIAGGIPTTASA
                     EELCQTLRASSRAGYANPAHQRLLGLRREDLDHLISAVEPPGCGADINALRRFMAGAF
                     RLERFPLRVPGADRRPRFCQASWLGVVQDERLVAIWTVLQDVTAERSLERATTIRSTE
                     NTTQIVGRSAAIGRVMEKIDQVAGTDSTVLIRGETGTGKELIARAIHQRSARRDQPLI
                     AVNCGAIAASLVESELFGHEKGAFTGALSRKIGRFELADGGTLFLDEIGDLSLDLQVK
                     LLRVLQEGELSRVGGSEAIRVDVRIIAATHRDLSTMVATGAFRQDLYYRLNVFPIMVP
                     PLRDRREDIPLLVSYFAAHYAERLGKRIDTIPEPVMRQLSGFHWPGNIRELANVIERS
                     VIVSPGSTLQLAEWATGAHVPVAMPGIPRPSDPASVAVPGAGGGLLELERRHIIATLE
                     RTRWKVSGPGGAAEILGLKPTTLEARMKKLGIVRP"
     gene            3675..>3898
                     /locus_tag="VLD58_15975"
     CDS             3675..>3898
                     /locus_tag="VLD58_15975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase"
                     /protein_id="HSB55861.1"
                     /translation="MPLDPAALQAHLGPRYRLVRELGGGGMAIVWLAEDTRHGREVAI
                     KLLRPEYAATFAAERFLREIEIAARLQHPH"
BASE COUNT          585 a         1299 c         1393 g          621 t
ORIGIN      
        1 gtggtgccct ccgagtcgat ggcggcctgg agaatccggc ggacgtggtg gtacagccgg
       61 cgccaggcat cgctcgggac cctggaggcc ggcttggagg ggtcgatacc tgcggcgaac
      121 agcgcctcgt tggcatagat gttcccgacc ccgaccagct ttcgctggtc catgatgacc
      181 ttcttgatcg cctgattgga gcggcgcagg tcctcctcga accgctcggg cgtgagcgcc
      241 gggtcgagcg gctccggccc cagcgcccga tcgtaactct cccactggcg gtcgttgagc
      301 aggagcaggg tgccgagccg gcgcacatcg cggaagacga aggcgctgcc gttgtcgagc
      361 cgggtgcgga gcacggcgta gcgggactcg gccggggtga gctcgcgatc gtagatgagg
      421 aggttgccgg tcatccccgg ctggagcacg aaccggtgct cgtcgaggtg aatcacggcg
      481 tgcttggccc gccgggtcac gtcgtgaatc ggagcaccgg tcagtacctt gagcagcctg
      541 ggccgggtga caccccgcag cacatcgatg tgggagagcg cggcggtggc gatccggcgg
      601 cccaccaggg cggggcgcac ctcgcgcacc atggtctcga cttcaggaag ctccggcatg
      661 cggcgtaagc tagcgaccac ggcaagtcgg ctcgaacggc cgaccctcga ggagagcgag
      721 ctgttccggg aactcgcggt ggagaccagg cgggtcctgg cccgcggggc ggtgatccgg
      781 gaggcggagc ctggcacggt gctcttccat gccggcgccc cggtgcgggg gctgatcctc
      841 atcctggccg gcaccgtgcg ggtggtgagc gagcgccagg gccggcagca cctggtgcac
      901 gaaagcggcc cgggagagac gctgggcgag gtgccgttgt tttcgggcgg cggctacccg
      961 gcgactgccg tggcccagac ccgctgcgtg tacgccgtgc tggcgcccga ggtgctgctc
     1021 caggcaatgc agcgggacgc ggcactggcc tggctgctcc tccgccgcct cgccggccgg
     1081 gtgcggcacc tggtcgaact tctcgaacgc aatacggtgt ggtcggtcga gagccgcctc
     1141 gccgaggtcc tgctccggcg gcaggaagcg gccggcacgg cgagcttcgc gctgggaatg
     1201 acccagcatg ccctcgccga ggaactcggc acggtgcgcg aagtgctggt gcgagagctg
     1261 gcggccttct gccgggatgg gctcgtgcgg cgggaacggc ggggctacta tcgcgtgatc
     1321 gacgccgagg cgcttcgtcg ccgggcgatg tgacttttgt gcctgcaggg tggagtgaag
     1381 gccggtagct tcgggccacc ttcaatcggg agctggtgat ggtccggtat ctctgggcgg
     1441 gtctcctcgt ggccgcggcg cccccaatgc gggcgcagga cagtggcggg atggatcaca
     1501 gtcatatgga tcacgccgcg catcacagag cgatgaccga ctctgccttt caggcactgc
     1561 agcagcgggg cggcgtgtac atgggtgtcg accagaccag atcggcccac cggttcgaca
     1621 gcctggatga cggagggcgg atcgagctcg tgagcactac cggcgactcg gccgacgttg
     1681 ccgcgatccg gcggcacttt caggtgatcg cggggcagtt ccggcagggc gacttcacca
     1741 cgccgttcgc cgtgcacgcc gacaccgtgc cggggacgaa ggtgatgcgc gagcggcggg
     1801 cggcgatcag ctacgacatg agcgaagtgc cgggcggtgc acagctccgc ctcaagaccg
     1861 ccgaccagat ggcgatcgcg gcgattcacc agttcatggc gtaccagcgg gcggaacacc
     1921 actcaccggg gcaggaatag ggtcatcctg agggatccct gcctttcaga tcagggatcc
     1981 ctcgcgtcgc tcgggcgaca ttcatttgcc gccttgccgc cttgccgcct tgccgcctca
     2041 aggcctcacg atccccagct tcttcatccg cgcttccaga gtggtcggct tgagcccgag
     2101 gatttcggct gcgccacccg gcccgctcac cttccagcgg gtgcgttcca gggtggcgat
     2161 gatgtgccgc cgctccagct cgagcaggcc accgcctgcc cccgggaccg ccacactggc
     2221 cggatcggat ggccgaggta tccctggcat cgccacgggg acgtgcgccc cggtcgccca
     2281 ttcggcgagc tgcagcgtgc ttcctggtga gacgatcacc gagcgctcga tgacattggc
     2341 cagctcgcgg atgttgccgg gccagtggaa gccggagagc tgccgcatga ccggttccgg
     2401 aatcgtgtcg attcgctttc ccagccgctc ggcatagtgg gccgcgaagt aactcaccag
     2461 cagcgggatg tcctcccgcc gatcccggag cggcggcacc atgatcggga atacgttgag
     2521 ccggtagtag agatcctgcc ggaatgcacc ggtcgccacc atggttgaca gatcgcggtg
     2581 ggttgcggcg atgatccgta catccacccg gatggcctcg ctgccgccga cccgggaaag
     2641 ctcaccctcc tgcagcaccc gcaggagctt gacctggagg tcgagggaga gatcgccgat
     2701 ctcgtcgagg aagagggtgc cgccgtcggc cagctcgaag cggccgatct tgcggctcag
     2761 ggcgccggtg aacgccccct tctcgtgtcc gaagagttcg ctctccacca ggctcgcagc
     2821 gatggccccg cagttgacgg cgatgagcgg ctggtcccgg cgggcgctcc gctggtgaat
     2881 cgcccgcgcg atcagttcct tgccggtccc ggtctcgccc cggatgagca ccgtcgagtc
     2941 ggtaccggcc acctgatcga tcttctccat gacccgcccg atcgccgcgc tccggcccac
     3001 gatctgggtg gtgttctccg tgctccggat cgtggtggcc cgttcgaggc tccgctccgc
     3061 cgtcacgtcc tgaagtaccg tccagatcgc gaccagccgc tcatcttgta ccacgccgag
     3121 ccaggaggcc tggcagaacc gggggcgccg atcggcgccc ggcacccgga gcgggaagcg
     3181 ctccagccgg aacgctcccg ccatgaaccg gcgcagggcg ttgatgtcgg cgccgcaccc
     3241 agggggctcg acggcggaga tcaggtggtc gaggtcttcc cgccggagtc ccagcaatcg
     3301 ctggtgagcc gggttggcgt agccggcccg ggagctggcc cgcagggtct ggcagagctc
     3361 ttcggcgctc gcggtggtgg ggatgccgcc ggcgatgtcc cagcggcaaa ccgccaccgg
     3421 gaggaggtcc agcaggtgct cgttccagcc ggccgcccca aagtccaggg gcgaaaccgg
     3481 ggagctctgt gtcatggtca tctggggcgg ccggggttca gaggtggccc gtcaagggac
     3541 tctgaagagt ggtcaacgcc gggtagttcg ggaaagttcc caataggttg ggaatcccgc
     3601 catgggcagg ctccggcccc tagccagtcc tcccggcccg gtctaatctc cgggcactcc
     3661 ggccacccgg tcgcatgccc ctcgatccag ccgcgctaca ggcacatctc ggtccccgct
     3721 atcggctcgt ccgcgagctg ggcggggggg gcatggccat cgtgtggctg gcggaggaca
     3781 cccggcacgg ccgggaggtg gccatcaagc tcctccgtcc ggagtacgcc gcgaccttcg
     3841 ccgccgaacg attcctccgg gaaatcgaga tagccgcccg gctccagcac ccgcacat
//
LOCUS       DATIFF010001095         1039 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1218962, whole genome shotgun sequence.
ACCESSION   DATIFF010001095 DATIFF010000000
VERSION     DATIFF010001095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1218962"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..281)
                     /locus_tag="VLD58_15980"
     CDS             complement(<1..281)
                     /locus_tag="VLD58_15980"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB55862.1"
                     /translation="MTRTFSEAFGTANRPEDLATHIARSYSAAIQARELADPDHTVLV
                     ADAAGSLAGYAQLRTGEVPAEVTGPAPLQLWRFYLDRAWQGTGLAPILMT"
     gene            complement(344..751)
                     /locus_tag="VLD58_15985"
     CDS             complement(344..751)
                     /locus_tag="VLD58_15985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55863.1"
                     /translation="MAVSRELIHDARTLMKIGAGTYEMELLKGSCRHGFRYHPTMVIA
                     GLCRARMLAAVREMELDWGLVTVARLNLKIGLEEKDPARGYKPMMVFGRYEGIYVLCR
                     MEALVTVTTDQGSWSASARGAIDWPRDWGKLGL"
BASE COUNT          153 a          335 c          389 g          162 t
ORIGIN      
        1 gtcatgagga tgggggcgag accggttccc tgccaggcgc gatcgaggta gaaccgccag
       61 agctgaagcg gggccgggcc ggtgacctcc gccggcactt cgccggtgcg gagctgggca
      121 taccctgcca gtgatccggc ggcatcggcc accagcacgg tgtggtcggg atcggccagc
      181 tcgcgggcct ggatcgcggc ggaataggag cgggcgatgt gggtggcgag gtcctcgggg
      241 cgattggccg tgccgaaggc ctcactgaag gttcgcgtca tcagggtggc gagtgcggcg
      301 gcttcggagg ggagagcgcg tcggacgatt acgccgtccg ctgtcacagt ccgagtttcc
      361 cccagtcgcg gggccagtcg atggcgcccc gggccgaggc gctccagctg ccttgatcgg
      421 tggtgacggt caccagggcc tccatccggc agaggacgta aatcccctcg taccgcccga
      481 acaccatcat cggcttgtac ccccgggcgg ggtccttctc ctcgaggccg atcttgagat
      541 tcaggcgcgc caccgtgacg agcccccagt cgagctccat ttcccgcacg gcggccagca
      601 tccgggcccg gcatagaccg gcgatcacca tcgtggggtg gtagcggaat ccgtggcggc
      661 aggagccctt gagcagttcc atctcgtagg tgccggcgcc gatcttcatc agcgtccggg
      721 catcgtggat cagctcgcgg gagaccgcca ccagtaccgc cgcttccgcg accctgtcga
      781 gggacgggtg gggggcgcgg cactctccgt ttccgcgggg gcttcgggat cgcgggtttc
      841 gtcagtcatg ccagcctggc cccaccggcc ggggcggatg acgcgcggcg gaacagcccc
      901 ggagcggaac catcaggagg cgcgggcggg gatggtgcgc agcagtccgt cgaacggatg
      961 ggtgaactcg agctcggtcc ccttctgcgg ctggatgaac cggagcagca gttcgcgcag
     1021 cgccagctcg tgggtcggg
//
LOCUS       DATIFF010001096         4781 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_602120, whole genome shotgun sequence.
ACCESSION   DATIFF010001096 DATIFF010000000
VERSION     DATIFF010001096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4781
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_602120"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..730)
                     /locus_tag="VLD58_15990"
     CDS             complement(<1..730)
                     /locus_tag="VLD58_15990"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HSB55864.1"
                     /translation="MLIDTHCHLASEQFAADLPEVLERTWASPVAHVVVIGETRPAAE
                     RALELAAAEPRLSVVAGVHPHDAAGWDAGMEAWLVATLEDPRVVAAGEMGLDYHYDHS
                     PRDAQRQVFERQLELAAQARKPVVIHAREADDDVAAILRNHPDITAILHSFSSGPGLL
                     RAGLDAGHYVSFSGMVTFKNWRDDDAVRLVPGDRLLVETDAPYLAPVPHRGRRNEPAF
                     VRDTALRVAALREVDPELLIAQTGE"
     gene            complement(838..1824)
                     /gene="secF"
                     /locus_tag="VLD58_15995"
     CDS             complement(838..1824)
                     /gene="secF"
                     /locus_tag="VLD58_15995"
                     /inference="COORDINATES: protein motif:HMM:TIGR00966.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HSB55865.1"
                     /translation="MIRFFANANYDFIGFRRYAYMVTGALFAVSLVALLVFGLNYSIE
                     FTGGTLVRVKAAPGVDAGQLRSALDAQGIHGAEIQSFGAPGEFIVRARTAKAGSDADN
                     TQATADAIHSALDQVIGAGNYTQQKGEAVGPKVGGELRTKALLAIFYSFFAVLAYLAY
                     RFEWRFGLAAVAATAHDIVLTIGFIALMRLEVSLVVVGAVLSMVGYSLNDTIIIFDRV
                     RENLHKYKRDHFADILNRSVNETLPRSILTHGTSLATLFSLAIFGGEVIRPFALVMFF
                     GVFTGTFSSIYIASPVLMWIEHKWPGADARGVRQVAKAAGSSEKREPVGVKG"
     gene            complement(1826..3508)
                     /gene="secD"
                     /locus_tag="VLD58_16000"
     CDS             complement(1826..3508)
                     /gene="secD"
                     /locus_tag="VLD58_16000"
                     /inference="COORDINATES: protein motif:HMM:TIGR01129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HSB55866.1"
                     /translation="MVVTSLKTRIGLILAMVALSVVSLIPRNTKIRERGPDGSIRDTV
                     IKQVPLKRGLDLQGGMHLGLELDQSKRVSADPAKDIDLALTVLRKRIDEFGVTEPLVQ
                     KQGDQRIVVELAGISDPARAKAIVQKSAFLEFRITDRSEALDKALPSMDRVLQRLGVR
                     APTGVEATTPSAVTQLLQGDTSKKQGVGEKKDSTAAARDTTPVLGGVLSGLIETSSTA
                     GYQLYPGEYLVEKTAVPLVDSLLRIPDVAALFPRRFEFRWSSTDLNIGNKAYAQLYVV
                     EDRPIVTGASLVDAKEDIDPLTSGPIVTFELDRKGARDFGEGTGRNVGNYMAIILDDK
                     VQGRPPVIQERIERRGQITLSGKTFQEARDLALTLRAGALPVPLKIVEESQVGASLGA
                     DSIRKGVLAGVVGTALVVLIMVGIYKKSGGLAVAALAFYILFSVGALSMLGATLTLPG
                     LAGLVLSVGIAVDANVLIFERIREELLLGKTVRLSIDEGFRHAMNAIVDSNVATVMTA
                     LFLFQFGTGPVKGFAVTLTIGVIASMITAVFVTRTFYMIWLDREPGMQTLSI"
     gene            complement(3515..4468)
                     /locus_tag="VLD58_16005"
     CDS             complement(3515..4468)
                     /locus_tag="VLD58_16005"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: protein motif:HMM:NF004160.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HSB55867.1"
                     /translation="MTAILPEHPEGTVVTVGTFDGVHLGHMAVLREIATRARTAGRKS
                     VLVTFEPHPLEVVNPQAAPPLLTSGPERREVLALTDLDYVVFLRFDRHLADYTPERFV
                     REVLVGRCGMRELVIGHDHGFGRGRSGDVETLRRLGASDGFLVDVVRAVELGGHAISS
                     TAIRRAVAGGDLKSAARLLGRPYTLSGRVIRGAGRGRTIGIPTINVSEFPERKLLPPD
                     GVYAARVEWAGGRAGGMLNQGGKPTFGDTSRTLEVHLFGVNEDLYGGWVRVEWVERLR
                     DVRKFGSVAELSSQLERDRAAALDALERHDVLNDHNRASHA"
     gene            complement(4465..>4781)
                     /locus_tag="VLD58_16010"
     CDS             complement(4465..>4781)
                     /locus_tag="VLD58_16010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55868.1"
                     /translation="TGAHLTALRREAIGDLRVEDAVPLDEVTLEALRPPLTVLRHLAR
                     MDVTEEEAKALGYGKALPDRRAAMPPDRPVTAVAEGERLIAIGHVVEGTFRPEVVLEP
                     AG"
BASE COUNT          776 a         1703 c         1570 g          732 t
ORIGIN      
        1 tctccccggt ctgggcaatc agcaactcgg ggtcgacctc ccgcagggcg gccacccgca
       61 gggcggtgtc ccgcacaaag gccggctcgt tccgccggcc gcgatggggc accggcgcca
      121 ggtagggcgc gtcggtctcc accagcagcc ggtcgccggg aaccagccgc acggcgtcgt
      181 cgtcccgcca gttcttgaac gtcaccatcc cgctgaacga cacatagtgg cccgcatcca
      241 gtcctgcccg caagaggccg ggcccgctgg agaacgaatg gaggatcgcg gtgatgtcgg
      301 gatgattccg gagaatggcg gcgacgtcgt cgtcagcctc acgggcgtgg atgaccaccg
      361 gcttccgggc ctgggccgcc agctcgagct ggcgctcgaa gacctgccgc tgggcgtccc
      421 ggggagagtg atcgtagtgg taatcgaggc ccatctcgcc ggccgccacg acccgggggt
      481 cctcgagcgt ggcgaccagc cacgcctcca tcccggcatc ccacccggcc gcgtcgtggg
      541 gatggacccc cgccaccacc gacagcctgg gctcagcggc ggcgagttcg agcgcccgtt
      601 ccgccgcggg ccgggtctcc ccgatcacca ccacatgggc caccggagac gcccaggtcc
      661 gctccaggac ctcaggaagg tcggcggcga actgctcgga ggcgaggtgg cagtgggtgt
      721 cgatcagcat agggccaagg accggagcca gtcgagctgg gggccaagag tcgggggtcg
      781 ggggcacatc gatgcggccc ctgacccccg acctcaagcc cctgtccccg cgacgaccta
      841 ccccttcacc cccaccggct cccgcttctc gctgctgccg gcggccttcg ccacctgccg
      901 caccccgcgg gcatcggcgc cgggccactt gtgctcgatc cacatgagga ccgggctggc
      961 gatatagatc gacgagaagg tgccggtgaa gacgccgaag aacatcacca gcgcgaacgg
     1021 ccggatcacc tcgccaccga agatcgccag cgagaagagc gtggccaacg aggtgccgtg
     1081 ggtcaggatg ctccggggca gggtctcgtt caccgaccgg ttgaggatgt cggcgaagtg
     1141 gtcccgcttg tacttatgca ggttttcccg gacccggtcg aagatgatga tcgtgtcatt
     1201 gagcgagtaa cccaccatcg agagtaccgc acccaccacc accaggctca cctccagccg
     1261 catgagggcg atgaacccga tagtcaggac gatgtcatgg gccgtcgcgg ccaccgcggc
     1321 cagcccgaaa cgccattcga accggtaggc caggtaggcc agcaccgcga agaagctgta
     1381 gaagatggcc agcagcgcct tggtgcggag ttccccgccg accttgggac ccaccgcctc
     1441 acctttctgc tgggtgtagt tccctgcccc gatgacctgg tccagcgccg agtggatggc
     1501 atcggccgtg gcctgggtgt tgtcggcgtc gctgcccgcc ttggcggtcc gggcccggac
     1561 gatgaactcg ccgggcgccc cgaacgactg gatctcggcc ccgtgaatcc cctgcgcgtc
     1621 caaggcactc cgcagctggc cggcatccac cccgggcgca gccttcaccc gcaccagagt
     1681 accgccggta aactcgatac tgtagttgag cccgaagacc agcagggcca cgaggctcac
     1741 agcgaaaagg gcgcccgtca ccatgtaggc gtagcggcga aacccgatga aatcgtagtt
     1801 cgcgttggcg aagaagcgga tcatgtcaga tgctcagcgt ttgcatgcct ggctcgcgat
     1861 cgagccagat catgtagaag gtgcgggtga cgaagacggc ggtgatcatc gaggcgatca
     1921 cgccgatcgt cagcgtgacc gcgaagccct tgaccgggcc ggtgccgaac tggaagagaa
     1981 agagcgccgt catcaccgtg gcgacgttgg agtcgacgat ggcgttcatc gcgtggcgga
     2041 acccctcgtc gatcgagagg cgtaccgtct tcccgagcag cagctcctcc cggatccgtt
     2101 cgaagatcag cacgttggcg tccaccgcga tgcccaccga aagcaccagg cccgccaggc
     2161 ccggcagggt cagggtcgcg cccagcatcg agagcgcgcc caccgagaag aggatgtaga
     2221 acgccagcgc ggccacggcc agtccgccgc tcttcttgta gatgccgacc atgatgagga
     2281 ccaccagcgc ggtacccacc acgcccgcga ggaccccctt gcggatcgag tcggcaccca
     2341 ggctggcacc cacctggctc tcctccacga tcttgagcgg caccggcagt gcgcccgccc
     2401 gcagggtgag cgccaggtcg cgcgcttcct ggaaggtctt gcccgagagg gtaatctgcc
     2461 cccgccgctc gatccgttcc tggatcaccg ggggacgccc ctggaccttg tcgtccagga
     2521 tgatcgccat gtagttgccg acgttccggc cggtgccctc accgaagtcc cgggcgccct
     2581 tgcgatcgag ctcgaaggtg acgatcgggc cgctggtgag cggatcgatg tcttccttgg
     2641 cgtcgaccag gctggccccg gtcacgatcg gccggtcctc gaccacatag agctgggcgt
     2701 aggccttgtt gccgatgttg aggtcggtgg aggaccagcg gaattcgaac cgccggggga
     2761 atagcgccgc cacatcgggg atccggagca agctgtccac cagcggcacc gccgtcttct
     2821 ccaccaggta ctcacccgga tagagctggt agcccgcggt cgacgaggtc tcgatcagcc
     2881 cgctcagcac cccgcccagt accggcgtgg tgtcgcgggc cgcggccgtg gagtccttct
     2941 tctcgccaac cccctgcttc ttcgaggtgt cgccctggag cagctgggtc accgccgagg
     3001 gcgtggtggc ctccacgccg gtcggggccc ggacgcccag ccgctggagc acccggtcca
     3061 tcgacggcag cgccttgtcg agcgcctcgc tccggtcggt gatccggaac tcgaggaagg
     3121 cgctcttctg cacgatcgcc ttggcccggg ccggatcgct gattccggcg agttcgacca
     3181 cgatgcgctg gtcgccctgc ttctggacca gcggctcggt gacaccgaac tcgtcgatcc
     3241 gcttgcggag taccgtgagc gcgaggtcga tgtccttggc ggggtcggcc gagacccgct
     3301 tggactggtc cagctcgagg ccgaggtgca tgccgccctg gaggtcgagc ccccgcttga
     3361 gcggcacctg tttgatgacc gtgtcccgga tgctgccgtc cgggccacgc tcgcggatct
     3421 tggtgttccg cgggatcagc gacaccaccg acagggccac catcgcgagg atgaggccga
     3481 ttcgggtctt gagagaggtg actaccatct ggtctcaggc atgggacgcg cgattgtgat
     3541 cgttcaggac atcgtgccgc tcgagcgcgt cgagggccgc ggcacgatcc cgttccagtt
     3601 gtgacgaaag ctccgcgacc gagccgaatt tccgcacgtc gcgcagccgt tccacccact
     3661 ccacccgtac ccacccgccg tacagatctt cgttcacccc gaagaggtgc acttccagcg
     3721 tccggctggt gtcgccgaag gtcggcttgc cgccctggtt gagcatcccg ccggcccggc
     3781 caccggccca ctccaccctg gcggcgtaca ccccgtcggg cggcagcagc ttccgctcgg
     3841 gaaactccga cacgttgatc gtcggaatcc cgatggtccg gccccgcccc gccccgcgaa
     3901 tcacccggcc actcagggtg tagggccggc ccagcagccg ggcggcactc ttgagatcgc
     3961 cacccgccac cgcccgccgg atcgcggtgc tgctgatcgc gtgaccgccc agctccaccg
     4021 cgcggaccac atcgaccagg aacccgtcgg aggcgcccag ccggcggagc gtctcgacgt
     4081 caccgctccg gcctcggcca aagccatgat cgtggccgat gacgagctcc cgcatcccgc
     4141 agcggcccac cagcacttcc cggacgaacc gctccggcgt gtagtcggcc aggtggcggt
     4201 cgaaccggag aaagaccacg tagtcgaggt cggtcagcgc caggacttca cgccgttccg
     4261 gtcccgatgt caggagcggc ggcgcggcct gggggttcac cacctccagc ggatgcggct
     4321 cgaacgtcac caggacgctc ttccgtcccg cggtgcgggc ccgggtcgcg atctcccgca
     4381 gtaccgccat gtggcccaga tgcaccccgt cgaaggtgcc gacggtgacc acggtgcctt
     4441 cgggatgctc gggaagaatc gccgtcatcc cgcgggctcc aggactacct cgggccggaa
     4501 ggtgccctcg accacgtgcc cgatcgcgat aagccgttcg ccctccgcga ctgccgtgac
     4561 tgggcggtca ggcggcatgg cggcacggcg gtcagggagc gccttgccgt agcccagcgc
     4621 ctttgcctcc tcctcggtca cgtccatccg ggccaggtgc ctgagcacag tcaggggcgg
     4681 ccgcaatgct tccagagtga cctcgtcgag cgggaccgca tcctccaccc ggagatcccc
     4741 gatcgcctcg cgtcgcagcg ccgtcagatg cgctcccgtg c
//
LOCUS       DATIFF010001097         2201 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1678689, whole genome shotgun sequence.
ACCESSION   DATIFF010001097 DATIFF010000000
VERSION     DATIFF010001097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2201
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1678689"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..1626)
                     /locus_tag="VLD58_16015"
     CDS             complement(34..1626)
                     /locus_tag="VLD58_16015"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSB55869.1"
                     /translation="MLALDPGFYDAIILRASLTFSKVQISRGLVSEDETRQLLEEGRG
                     YLRRAQAIDPEGVWTHRANANFLLASGDTAGSIAAWKRARALAPWSPGLAQGLCPIEL
                     ARTPGSAPAPESCRSMIALDSLNPDNLRVAGYYYQYGNRLQEGEALTRRCIALDPTSL
                     QCYADLGDNLQMQGRLEESLVPLRQGERLEPDNLQVHITLGFTLMGLERMDEAIDELR
                     RAVALPAEDRDFKHYLVDALIMAGRTGDAIEAGRATVRKVPRSPQAHRSLANALWAAG
                     QFEAALTELKTAVDLNPNGTDERLQYASANRLLGRVAEAQRAVDQVVLRDPNSFASRD
                     ALVSQLEWIGQPAQALVELERRGDSTDARDVIARAVMEIELGRNQDAAATMAQARQLD
                     SAAVDNHPATSQVYAIIGPSDMAIRAVDRYRALDPWNQFMIASQIWVYAHHGKRAEAL
                     AKLDSLERRRTKVAPSEIPLLLAYAGVGDTARAIAALNRSIARRDWSWIYLAPEDPRL
                     AILKGRPEYRAALRALREAGDR"
     gene            1770..>2201
                     /locus_tag="VLD58_16020"
     CDS             1770..>2201
                     /locus_tag="VLD58_16020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55870.1"
                     /translation="MLQRRGDVVAFDREPWRGIGHLGEEQLQPAAGGRRQLVQQHLVQ
                     GGGPTVDVRSGIDRGTEPLLRAHVRRGSDGDTGVGELGRSALRVGGRGLGDAEIGDQG
                     VAVFGEEDVLRLDVAVDHALLVGKLQRLRRFAGDADGFGDRE"
BASE COUNT          305 a          734 c          786 g          376 t
ORIGIN      
        1 gcgatcccgg acacactcct gtcggcgtct gaatcatcgg tcccccgcct cccgcagggc
       61 ccgcaacgcc gcccggtact ccggccggcc cttgagaatg gcgagccggg ggtcctccgg
      121 ggccagatag atccaactcc agtcccgcct ggcgatcgac cgattcagcg ccgcgatcgc
      181 ccgcgcggta tcacccaccc cggcatacgc gagcaggagc gggatctcgc ttggcgccac
      241 cttcgtccgt cgccgctcca gcgagtcgag cttggcgagt gcctcggcac gcttcccgtg
      301 gtgggcgtac acccagatct gtgacgcgat catgaactgg ttccagggat ccagggcacg
      361 gtagcggtcc accgccctga tggccatgtc tgacggtccg atgatggcgt agacctggct
      421 ggtggccggg tggttgtcca ccgcggccga gtcgagctgg cgggcctggg ccatggtggc
      481 ggctgcgtcc tggttgcggc ccagttcaat ctccatcacc gccctggcaa tcacgtcccg
      541 ggcgtcggtg ctgtcgcctc gacgctccag ttcaaccagt gcctgggccg gctggccgat
      601 ccattccagc tgcgacacca gcgcgtcccg gctggcgaac gagtttggat cgcgcagcac
      661 cacctggtcc acggcccgct gtgcctcggc gacccgtccg agcaggcggt tggcggaggc
      721 gtactggagt cgctcatcgg tgccattggg attgaggtcg accgcggtct tcaattccgt
      781 gagcgcggcc tcgaactgtc cggcggccca gagggcgttg gccagcgagc ggtgggcctg
      841 gggactccgc ggcaccttcc ggaccgtcgc ccgccccgcc tcgatggcgt cgccggttcg
      901 tccggccatg atcagcgcat cgaccaggta atgcttgaag tcgcggtctt cggccggcag
      961 cgccacggcg cgccgcaact cgtcgatcgc ctcatccatc cgctccagcc ccatcagcgt
     1021 gaagccgagg gtgatgtgga cctggaggtt gtcgggttcg agccgctcgc cctggcggag
     1081 aggcaccagc gattcctcca gcctcccctg catctggagg ttatcgccga ggtcggcgta
     1141 gcactgcaga ctggtggggt cgagcgcgat gcaccggcgg gtgagggcct cgccttcctg
     1201 gaggcgattg ccgtactggt agtagtagcc ggcgacgcgg agattgtcgg ggttgagcga
     1261 atcgagcgcg atcatgctgc ggcaggactc gggggccggg gcgctgccgg gggtgcgcgc
     1321 cagctcgatg gggcagagtc cctgcgccag gccgggtgac cagggggcca gtgcccgggc
     1381 gcgcttccag gccgcgatgc ttcccgccgt atcaccgctg gccagcagga agttggcgtt
     1441 ggcacggtgg gtccagactc cctcgggatc gatcgcctgg gcccgccgca ggtagccgcg
     1501 tccctcctcg agcagctgcc tggtctcgtc ctccgacacc agcccgcggg agatctgcac
     1561 cttggagaac gtgaggctgg cccgcaggat gatcgcgtcg tagaagccag gatccagcgc
     1621 gagcaccgaa tcgacgtggc ggatgatggt gttgagcccg tcctgcccgt aaccgtacag
     1681 gccggggaag acccgggcga ggcgccggcg aactcggcca tcgaggtgaa ccgctgcgtc
     1741 gggtcggccg cgataccctt gcgcaccact tgctccagcg caggggtgat gtcgttgcgt
     1801 ttgaccgaga gccttggcgc ggcatcggtc atctgggcga ggaacagctc cagcccgccg
     1861 ccggcggccg gcggcagctc gtccagcagc atctcgtaca gggtggcggc ccgacggtag
     1921 atgtccgatc gggcatcgac cggggcaccg agccgctgct ccgggctcat gtacgccggg
     1981 gttccgatgg cgataccggt gtcggtgagc tgggtcgttc cgctctgcgg gtcggtggcc
     2041 gcggccttgg cgatgccgaa atcggcgacc agggtgtggc cgtcttcggt gaggaggatg
     2101 ttctccggct tgatgtcgcg gtggatcacg ccctgcttgt gggcaaactc cagcgcctgc
     2161 gccgcttcgc gggtgatgcg gacggcttcg gggatcgaga g
//
LOCUS       DATIFF010001098         1246 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_447697, whole genome shotgun sequence.
ACCESSION   DATIFF010001098 DATIFF010000000
VERSION     DATIFF010001098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_447697"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(156..>1246)
                     /locus_tag="VLD58_16025"
     CDS             complement(156..>1246)
                     /locus_tag="VLD58_16025"
                     /inference="COORDINATES: protein motif:HMM:NF042530.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF6596 domain-containing protein"
                     /protein_id="HSB55871.1"
                     /translation="GHPRGWLIRVAQRRLADQARSDIARRTRETAVAADAPQVAPWND
                     DVPEVDPDDTLVLLFMCCHPALTAASAIALTLRAVGGLTTAEIAHSFLMPESTIGQRI
                     SRAKLTIRSSGIPFRMPEAGERIERLGAVLHVLYLIFNEGYTSTSGAALHRTDLSNEA
                     IRLTREVHRLIPDSGDAVGLLALMLLTDARRAARAGPHGELIPLDEQDRTRWDREAIA
                     EGIALADLALSKGSVGEYQLQAAIAAVHDEAERAEDTDWAQIVALYDMLLRLTGSPMV
                     RLNHAIATAMVSGPAAGLALLEPLEHDERLRTTHRLDAVRAHLLDRAGEREQAIRLYR
                     QAASRTASLAERNYLLKKASRLSDPGPG"
BASE COUNT          189 a          427 c          444 g          186 t
ORIGIN      
        1 tcacgctcgg cgacgagcgg cattcatgaa acgcgcggca tggccggctg caccatgcgc
       61 cacggagaca cggatggcac ggagagcaac tcgagaagcg gagccccgcg ggcgcgcatc
      121 cgtgcagtgt aacccgccga ctcgacggcc ggggctcacc cgggccccgg gtcgctcagt
      181 cggctcgcct tcttgagcag gtagttgcgc tccgccaggc tggcggttct ggaggcggcc
      241 tgacggtaga gccggatcgc ctgttcccgc tcacccgccc ggtccagcag gtgggcccgg
      301 accgcgtcca gccggtgggt ggtgcggagc cgctcgtcat gctcgagtgg ctcgagcagc
      361 gccagtcccg ctgccggacc gctgaccatc gccgtggcga tggcgtggtt gagccgtacc
      421 atcggactgc cggtcagccg cagaagcatg tcgtagagcg ccacgatctg cgcccagtcg
      481 gtgtcctcgg cccgctcggc ctcgtcgtga accgccgcga tcgcggcctg cagctgatac
      541 tcgcccactg accccttcga cagggcaagg tcggccaggg cgatgccctc cgcaatcgcc
      601 tcccggtccc accgggtgcg atcctgttca tcaagcggga tcagttcgcc atgggggccg
      661 gcacgcgcgg ccctgcgggc gtcggtgagg agcatcaggg ccagcaggcc gaccgcgtcg
      721 ccgctgtcgg ggatgagccg gtggacctcg cgcgtcagcc ggatcgcctc gttcgagaga
      781 tcggtccggt gcagagcggc gccggaggtc gaggtgtacc cctcgttgaa aatgagatag
      841 aggacatgca gcaccgcgcc gagccgctcg atgcgctcgc cagcctcggg catgcggaac
      901 ggtatccccg acgagcggat ggtcagcttg gctcggctga tgcgctgtcc gatggtcgac
      961 tccggcatca ggaacgagtg ggcgatttcg gcggtggtga gcccaccgac cgcccgcagg
     1021 gtcagcgcga tcgccgaagc ggcggttagc gccgggtggc agcacatgaa gaggagaacc
     1081 agcgtgtcgt cgggatcaac ctcagggacg tcatcattcc acggcgccac ctggggcgca
     1141 tcagcggcaa ccgccgtctc cctggtccgc cgggcgatgt cactccgggc ctgatcggcc
     1201 aggcgccgct gggctacccg tatcagccag ccgcggggat gccctg
//
LOCUS       DATIFF010001099         7494 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1219473, whole genome shotgun sequence.
ACCESSION   DATIFF010001099 DATIFF010000000
VERSION     DATIFF010001099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7494
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1219473"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..183
                     /locus_tag="VLD58_16030"
     CDS             <1..183
                     /locus_tag="VLD58_16030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55872.1"
                     /translation="GRLKVSRAGLRQRDRMVFQACRSRGLPVVMTLSGGYARDVTDVA
                     EIHADTLEELLAACPA"
     gene            171..992
                     /locus_tag="VLD58_16035"
     CDS             171..992
                     /locus_tag="VLD58_16035"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSB55873.1"
                     /translation="MPRVNGVDLFERRVGSGSPVVVLHGGPGAHHDYLLPGFDALATG
                     HELIYYDQRGGGQSPVGRDVPVGWREHVADLEALRQHWGLERLTLAGYSWGGLLAMLY
                     ALEHPGRVERLALISPAPAWREARDEFERRFQARTMAPALQAARQALRESGLRERDPS
                     AYASRLFELAVAGYFHDPSRAVSLTPFRVTERTRAEVWQSLGDFDLRPRLRQLTVPAM
                     VLHGDDDPIPWECARETAQCLRAEFHLVKDCGHVPYVEAFEEFVRVVGGYLAISR"
     gene            1092..1805
                     /locus_tag="VLD58_16040"
     CDS             1092..1805
                     /locus_tag="VLD58_16040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55874.1"
                     /translation="MPPRPTPFDIAFGSTAGERFARMRESLAATGRDPHDLDAFVLDR
                     EVVGYLRELVPEEGVGEAIEQHVALLHHAYLYWAEGAWTVRLSRDRTRSLLTAPATDY
                     VAPGADLPRASYIQFPERLIWAPLAPDEPHQPLDGIFVRPWPSAGFFLLAVFGLHPGQ
                     DAFAVVDVDGYRELKTERDDGTPLFAPVLPGGEAAGLFSIVGGDELLELAARTVPLLA
                     EAVSCAGAAHQPHHPVDLS"
     gene            1805..3535
                     /gene="polX"
                     /locus_tag="VLD58_16045"
     CDS             1805..3535
                     /gene="polX"
                     /locus_tag="VLD58_16045"
                     /inference="COORDINATES: protein motif:HMM:NF006375.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase/3'-5' exonuclease PolX"
                     /protein_id="HSB55875.1"
                     /translation="MSMDKKAVAGVLEQIAAFLELKAENPFRVRAFRTASRAIASLPG
                     ELAEAMADGSLAGTKGVGPATLQIVQELVASGRSSLLEELREQVPPGLVEMMQIGGLG
                     VAKIRQIHEALDIDSLPELEAAARDGRLAKLPRFGPKTAENILKGIAFLRQASAFKLA
                     HHAAEEAEGLRTALAALPGVLSAEIAGDVRRRMEVVRDIVVVLVANVAPAEVFRVIGQ
                     LPGVHEFSGKDERRVTLRVSGGAQAEVIVTSPRNAGAVLVHATGSEAHIAQLAAHARQ
                     KGFGLDGAALWRGSEFVATADEPAFYSALGLAPIPPELREGRGEIEAALANQLPRLLE
                     RSDLAGFLHCHSAYSDGTTSIEELAAACRDAGYSYVGLTDHSKAAAYAGGLTPEDLLR
                     QSDEIDAVNARLKGVRVLKGVEADILADGALDYDETILRRLDFVIGSIHSRFGLSREE
                     MTARMLAAMDNPYLSIIGHPTGRLLLSRDPYPLDLQAVFEKAAKQGVAIEINGDPHRL
                     DLDWRLLRQARDGGVMISIGADAHNIPGLRHVDYGVAMARKGWLTRDDVLNTRSVDQF
                     LAFVRKRRPA"
     gene            3532..4278
                     /gene="nth"
                     /locus_tag="VLD58_16050"
     CDS             3532..4278
                     /gene="nth"
                     /locus_tag="VLD58_16050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HSB55876.1"
                     /translation="MKKPVKRPSAKAAKRTSAKTVKAKKPTPATRRARRFPASETPAR
                     ARQVLARLRVEYPAARCALDHADAYQLLVATILSAQCTDVRVNLVTPSVFAAYPNAAA
                     LARARQPDVEKLIQSTGFFRNKAKNLIAMAQAVVAEHGGEIPRTMAELHALPGVGRKT
                     ANVVLGNAFGINEGVTVDTHVTRLSGLLGLTRHTDAVKIEQDLMQLIPRDDWTLISHL
                     LILHGRKVCIARRPQCEACVLNDLCPSSRV"
     gene            complement(4497..5009)
                     /locus_tag="VLD58_16055"
     CDS             complement(4497..5009)
                     /locus_tag="VLD58_16055"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSB55877.1"
                     /translation="MPEVSVTRTYLEMASPGDLVAEGSAGPEVRLEVVKDCPWHFYRY
                     LYAEVGREYHWKDRLPWTEAQFREWLAGPSSIWLLSVSGAPAGFFELRGHSDQSQEIA
                     YFGLLPEYQGQGLGKFLLTRAVQEAWAAGPSRVWLHTCTLDHPGALPNYLKRGFRKVG
                     EEVYVTSIPG"
     gene            5148..7334
                     /locus_tag="VLD58_16060"
     CDS             5148..7334
                     /locus_tag="VLD58_16060"
                     /inference="COORDINATES: protein motif:HMM:NF025141.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT domain-containing protein"
                     /protein_id="HSB55878.1"
                     /translation="MRRALLSLVALVVAAAPLRAQGWIEIERPRVPLPVNPNIVRVSS
                     EVRTTIDGRVARVEVEERFRNNGGGLAEGSYLYPLPGEAVFQNFSLWMGDQELRGEMM
                     NADQARGIYEEIVRRQKDPALLTLAGHGLVRAQVFPIQPGETRKVVLRYTQLLDRAGD
                     ALRLRYSLGARGGEAGAWRLSLPDESAYGTPYSPTHQLTTTRVNGRLELSIDTRSGGD
                     IELLLPLRRGLVGTSVLTHAPGGEDGYVMLLLAPAEREEGPVVPRDLSLVVDVSGSMS
                     GQKLEQAKAALRQALGTLRPEDRFRLIAFSSGVRNFHEGFTPATQANLADAREFVDAL
                     AADGGTNISGALDAVLGSSVSDERLQLVIFLTDGVPSVGEQNPDRIASQAAGRIGRAR
                     VFTVGVGHDVNTYLLDRLAKEGRGAAEYVAPEANVEVAVGNLVAKLRRPALVNLRIVE
                     SPVEFRTLTPGNLPDLFYGEELVVFGRYHGTGRGQVIIEGERNGRRERFTAEASFPEV
                     SASNEFIPKLWASRRIGDLTRQIRLEGANDGLIREVRDLGLRYGILTEYTSYLVQEPS
                     LAVRDDRRMQDRIGPTASRSMPAAAPAAQTGQVAFERAKESGRLSQAKSLSEAEAAAE
                     DKFESLGGSSNELRRSGGRVFRRQAGVWTDVAHADTLRVTTVAPFSPAYFAVMRALPE
                     LASSLQVDGAVLVAGKRASLKIADGGLERIGDAELREFVRRFRGVS"
BASE COUNT         1168 a         2662 c         2494 g         1170 t
ORIGIN      
        1 ggccggctca aggtgagccg ggccggattg cgccagcgcg accggatggt gttccaggcc
       61 tgtcggagcc gcgggctgcc ggtggtgatg acgctctccg gcggatatgc ccgcgacgtg
      121 accgacgtgg cggaaatcca cgccgatacc ctcgaggagc tgctggcggc atgccccgcg
      181 tgaacggggt cgacctcttc gagcgccggg tgggaagcgg gagcccggtc gtggtgctcc
      241 acggcggacc cggggcccat cacgactatc tgctgcctgg gttcgacgcg ctggccaccg
      301 gccacgagct gatctactac gaccagcgcg gaggcggaca gtcaccggtc gggcgggatg
      361 tgccggtcgg atggcgggag catgtcgccg acctcgaggc gctgcgccag cattggggac
      421 tcgaacggct caccctcgcc gggtattcct ggggtgggct gctggcgatg ctctatgccc
      481 tcgaacatcc cggtcgggtg gaacggcttg ccctgatctc accggcgccc gcctggcgcg
      541 aagcccggga cgaattcgag cggcgcttcc aggcgcgcac catggcgccc gcgctccagg
      601 cagcccgcca ggcgctccgc gagagcggcc tccgggagcg cgacccgtcg gcctacgcat
      661 cccggctctt cgaactggct gtggcgggct attttcacga cccgtcccgc gcggtgtccc
      721 tcactccgtt ccgggtgacg gagcggaccc gcgccgaggt gtggcagagc ctgggcgact
      781 tcgacttgcg tccccggctc cgccagctca ccgtgccggc catggtgctc cacggcgacg
      841 acgacccgat cccgtgggag tgtgcccgcg aaaccgcgca gtgtctccgg gccgaatttc
      901 acctggtgaa ggactgcggc cacgtgccgt atgtcgaggc cttcgaggag ttcgtccggg
      961 tggtgggggg ctatctggcc attagccgtt agccgttagc cattaggtta cttcctcttc
     1021 gttccaccac cggagtccga cgatgcaaca actgccaacg gccaacggct aacggccaac
     1081 ggcctcttac gatgccgccc cgccccaccc ccttcgatat cgccttcggc tccaccgccg
     1141 gagagcgatt cgcccgcatg cgcgagtccc tcgccgccac cggtcgcgac ccgcacgatc
     1201 tcgatgcctt cgtgctcgat cgcgaggtgg tgggctacct gcgggagctg gtgccggaag
     1261 aaggcgtcgg cgaggcgatc gaacagcacg tggcgctgct gcaccatgcc tatctctact
     1321 gggcggaggg agcctggacg gtgcggctga gccgggaccg gacccggagc ctcctcaccg
     1381 cacccgccac cgactacgtg gcaccgggcg ccgatctccc ccgggcgagc tacatccagt
     1441 ttcccgagcg cctgatctgg gccccgctcg cacctgacga accacaccag ccgctcgacg
     1501 gcatcttcgt gcggccttgg ccctcggccg gcttctttct gctggccgtc ttcgggttgc
     1561 acccgggcca ggacgccttc gcggtggtgg acgtcgatgg ctatcgcgag ctcaagaccg
     1621 agcgcgacga cggcaccccg ctctttgccc cggtgctccc cggcggggag gccgccgggc
     1681 tcttctccat cgtcgggggc gacgagctgc tggagctggc cgcgcggacc gtgccgctcc
     1741 tcgcggaggc ggtgagctgt gccggggcgg cgcaccaacc ccatcaccca gtcgacctgt
     1801 cctgatgagc atggacaaga aggccgtcgc cggcgtgctg gaacagatcg ccgcattcct
     1861 cgagctcaag gccgagaatc cgttccgggt gcgggcgttc cgcaccgcgt cgcgcgcgat
     1921 cgcgagcctc ccgggagagc tcgccgaagc gatggccgat ggctcgctgg cgggcaccaa
     1981 gggcgtgggc ccggcgaccc tccagatcgt ccaggagctg gtcgcgagcg gacgctcctc
     2041 cctgctcgag gagctgcgcg agcaagtccc cccaggcctt gtcgagatga tgcagatagg
     2101 cgggctgggc gtcgccaaga tccgccagat ccacgaagcg ctcgacatcg actcgctccc
     2161 cgagctcgag gccgcggccc gcgacgggcg gctcgccaag cttccgcgct tcggcccgaa
     2221 gaccgccgag aacatcctca agggcatcgc cttcctgcgg caggcgagcg cgttcaagct
     2281 ggcgcatcac gccgccgaag aggccgaggg ccttcgcacc gcgctcgccg cgctgccggg
     2341 tgtgctgtcc gcggaaatcg cgggtgacgt ccgccgccgg atggaagtgg tgcgcgacat
     2401 cgtggtggtg ctggttgcca acgtggcgcc cgccgaagtc ttccgggtga tcggccaatt
     2461 gccgggagta cacgagtttt cggggaagga cgagcggcgg gtgacgctgc gggtgagtgg
     2521 cggtgcccag gccgaggtca tcgtcacctc gccccggaat gccggggcgg tgctggtaca
     2581 cgccaccggg agcgaggccc acatcgccca gctcgcggcc cacgcccgcc agaagggatt
     2641 tggtctcgac ggtgcggcgc tctggcgcgg cagcgagttc gtggccaccg ccgacgaacc
     2701 ggccttctat tccgcgctgg gcctggcgcc gatcccgccc gagctgcgcg aaggccgggg
     2761 cgagatcgag gcggcgctcg ccaaccagct gccccggctg ctcgagcgaa gcgacctggc
     2821 cgggttcctc cactgccatt cggcgtattc cgacggcacc acctccatcg aggagctggc
     2881 ggcggcgtgc cgcgacgcgg gctacagcta cgtcggcctg accgaccaca gcaaggcggc
     2941 ggcctacgcc ggtggactga cccccgagga tctcctccgc cagtcggacg agatcgacgc
     3001 ggtgaacgcc cgtctcaagg gagtccgggt actcaagggc gtcgaggccg acatcctcgc
     3061 cgatggcgct ctcgactacg acgagaccat cctccgccgg ctcgacttcg tgatcggctc
     3121 gattcacagc cgcttcgggc tgtcgcgaga ggagatgacc gcccggatgc tcgcggcgat
     3181 ggacaatccc tatctctcca tcatcgggca cccgaccggg cggctcctgc tctcccgcga
     3241 tccctacccg ctcgatctcc aggcggtgtt cgagaaggct gcgaagcagg gcgttgccat
     3301 cgagatcaac ggcgaccctc accggcttga cctcgactgg cggctgctgc gccaggcccg
     3361 cgatggcggc gtgatgattt cgatcggcgc cgacgcccac aacatccccg ggctccggca
     3421 cgtcgactac ggagtggcga tggcgcggaa gggctggctc acccgtgacg acgtgctcaa
     3481 cacccgctcg gtggaccagt tcctcgcctt cgtgaggaaa cggaggcccg cgtgaagaag
     3541 ccggtcaagc gtcccagtgc caaggcggcg aagcggacca gcgcgaagac ggtcaaggcg
     3601 aagaagccca cgccggcgac gcgacgcgcg cggcgcttcc cggcatccga gaccccggcc
     3661 cgcgcccgcc aggtcctcgc tcgcctccgg gtcgagtacc cggcggcacg ctgcgccctc
     3721 gatcatgccg acgcctacca gttgctcgtt gccaccattc tctcggccca gtgcaccgac
     3781 gtccgggtga acctggtgac accgtcggtg ttcgcggcgt accccaatgc ggccgccctc
     3841 gcccgggcgc ggcagcccga tgtcgagaag ctgattcaat cgacggggtt cttccgcaac
     3901 aaggcgaaga acctgatcgc catggcgcag gccgtggtcg ccgagcacgg cggcgagatc
     3961 ccccgcacca tggcggagct gcacgccctg cctggggtgg ggcggaagac cgcgaatgtg
     4021 gtcctgggga atgccttcgg tatcaatgag ggagtgaccg tcgataccca cgtgacccgg
     4081 ctctccgggc tcctcggact cacccggcac accgacgcgg tgaagatcga acaggacctg
     4141 atgcagctga ttccgcggga cgactggacc ctcatctccc acctgctgat cctgcacggc
     4201 cggaaggtct gcatcgcgcg gcggccccag tgcgaggcct gcgtgctcaa tgacctttgc
     4261 cccagctctc gggtctagtc ggccaactgc ctacacagat gacaccgatg ggaacggatt
     4321 cacgctcctc gtcgaacgta ggccgcagag acgaagcccg aacttgctgt tctcttgttg
     4381 tccaatactc acggacagac ctgctcggat tctccacagg aaacagtgac ccttcgatta
     4441 cctggacggt gaatccgttc ccatcccaaa catccccgta agcagttgcc gttgcctcag
     4501 ccagggatgc tcgtgacata cacctcctcg cccaccttcc ggaatccccg cttgagatag
     4561 ttaggcagcg cccccggatg gtcgagcgtg caggtatgga gccacacccg gctcggccca
     4621 gccgcccagg cctcctgtac cgcgcgcgtc agcagaaact tcccgagtcc ctgcccctgg
     4681 tactccggca gcaggccgaa gtaggcgatc tcctggctct gatcggaatg accgcggagc
     4741 tcaaagaacc ccgccggcgc gcccgagaca ctcaggagcc agatgctgct cggccccgcc
     4801 agccattccc ggaactgcgc ctcggtccag ggcaaccggt ccttccagtg gtactcccga
     4861 ccgacctcgg catagaggta acggtagaag tgccagggac agtccttcac gacttcgagc
     4921 cgcacctccg gtccggcact cccctcggcg accagatcgc cgggtgaggc catctccaga
     4981 taagtccggg taacgctgac ctcaggcatt tcggccgttc ctctcgcgaa tccccaagtg
     5041 caagccagca accaagatgc gggagatgct ccagttgagc caagggcgcc gtgcaaatcg
     5101 atatggcaga cgcatccccc ggctgtcccc gaacgcctga ggaatccatg cgccgtgccc
     5161 tgctgtcgct cgttgccctg gttgtcgccg cggccccgct ccgcgcccag ggatggatcg
     5221 agatcgaacg tccccgcgtc ccgctgcccg tcaacccgaa tatcgtgcgg gtaagctcgg
     5281 aagtccgcac caccatcgac gggcgggtag cccgggtcga ggtggaggag cggttccgca
     5341 acaacggcgg tgggctggcg gagggaagct acctctaccc actgccaggc gaagccgtct
     5401 tccagaactt ctcgctctgg atgggtgacc aggagctgcg aggggagatg atgaacgccg
     5461 accaggcgcg cggcatctac gaagagatcg tccggcgcca gaaggacccg gcgctgctga
     5521 ccctcgccgg gcatggcctc gtccgggccc aggtcttccc gattcagccg ggcgagacgc
     5581 ggaaggtggt gctccgctac acccagctgc tcgatcgcgc cggcgatgcc ctccgcctcc
     5641 ggtactccct cggcgcccgc ggcggcgagg ccggcgcgtg gcggctctcg ctgccggacg
     5701 aatcggcgta cggcacgccc tactcgccta cccatcagct caccaccacc cgggtcaatg
     5761 ggcgtctcga actgagcatc gataccagga gcggcggtga catcgagctg ctcctgcccc
     5821 tgcgccgcgg cctggtgggt acctcggttc tcacccatgc ccccggcggc gaggacggct
     5881 acgtgatgct gctgctcgcg ccggccgaac gggaagaggg ccccgtggtc cctcgcgacc
     5941 tctcgctggt ggtcgacgtc tccggttcga tgtcgggcca gaagctggag caggccaagg
     6001 ccgcgctccg ccaggcgctc ggcacgctgc gtcctgaaga ccgcttccgc ctcatcgcgt
     6061 tcagctcggg cgtgcggaat ttccatgagg gcttcacgcc ggccacccag gccaacctcg
     6121 ccgatgcccg cgaattcgtc gacgccctgg cggccgatgg cggcaccaat atcagcggcg
     6181 ccctcgacgc cgtgctcggc agctcggtct cggatgagcg gctgcagctc gtcatcttcc
     6241 tgaccgacgg cgtgcccagc gtgggggaac agaatcccga ccggatcgcg agccaggccg
     6301 ccggccggat cggccgggcc cgggtcttca ccgtcggggt cgggcatgac gtgaacacct
     6361 acctgctcga ccggctggcc aaggaagggc gcggtgccgc cgagtacgtc gcgcccgagg
     6421 ccaacgtgga agtcgcggtc ggcaacctgg tcgccaagct gcgccgtccg gcgctggtga
     6481 acctgcggat cgtcgagtcg ccggtggagt tccgcactct gactcccggc aatctccccg
     6541 acctcttcta tggggaagag ctggtggtct tcggccgcta ccatggcacc ggccggggtc
     6601 aggtgatcat cgagggcgaa cgcaacggcc gccgggagcg cttcaccgcc gaagccagtt
     6661 tccccgaggt gagcgcctcc aacgagttta tccccaagct ctgggcctca cgccgcatcg
     6721 gtgacctgac ccgtcagatc cggctcgaag gcgcgaacga cggcctgatc cgggaagtgc
     6781 gcgatctcgg actccgctac ggcatcctta ccgagtacac ctcctacctg gtgcaggagc
     6841 ccagtctggc cgtgcgcgac gaccggcgca tgcaggaccg gatcggcccg accgccagcc
     6901 gctcgatgcc ggccgctgcc ccggcggcgc aaaccggcca ggttgccttt gagcgcgcca
     6961 aggagagtgg ccgcctctcg caggccaaat cgctgagcga ggccgaggcc gccgccgaag
     7021 acaagttcga gtcgctgggt ggttcttcca atgagctgcg tcgctcaggg ggccgggtgt
     7081 tccgccggca ggccggcgtc tggaccgacg tcgcccatgc cgataccctc cgggtgacga
     7141 cggtggcgcc gttcagtccc gcctactttg ccgtgatgcg cgcgctgccg gagctggcca
     7201 gcagtctcca ggtggacggc gccgtgctcg tggccggcaa acgcgccagc ctcaagatcg
     7261 ccgatggcgg actcgagcgg atcggcgacg ccgagctgcg tgaattcgtc cgccgcttcc
     7321 ggggagtctc atgagacctt tcctcttcgt ctgcctcctc agcctcggcg cctgcgccgc
     7381 cgaggccggg gaggagcccg gcaagacgtg gaagtacggc caggcgcgcg ccgactgcgc
     7441 accctgggat ggtgccgcca ccagcgtgct gttgagtgac tccgtgatcg gcga
//
LOCUS       DATIFF010001100         1348 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1526944, whole genome shotgun sequence.
ACCESSION   DATIFF010001100 DATIFF010000000
VERSION     DATIFF010001100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1348
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1526944"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1348
                     /locus_tag="VLD58_16065"
     CDS             <1..>1348
                     /locus_tag="VLD58_16065"
                     /inference="COORDINATES: protein motif:HMM:NF017930.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55879.1"
                     /translation="RFIGRGNTVADPQAMSWGAGYYSGALSGSEGSVLDPIVAIRCRI
                     TLDPEESATINMVSGVGETRDAALSLVEKYQDRRLADRVFDLAWTHGQVLLRQFNASA
                     ADAQLYGRLAASIVYAHASLRADPGVLVKNRRGQSGLWGYAISGDLPIVLLQIEDPAH
                     IELVRQLVQAHAYWRQKGLAVDLVIWNEDHAGYRQLLHDQIMGLIAAGTGIGLTDRPG
                     GIFVRPSDQISEEDRILIQTVARAIITDRRGSLADQIKGRLPVEASVPLLAPTRTHRP
                     EPPAVTARPRHDLTFYNGLGGFTPDGREYVVTTAHGQLTPAPWVNVVANSQFGSVVSE
                     SGPAYTWSENAHEFRLTPWGNDPVSDSGGEAFYLRDEERGHFWSPTPLPCRGATPYVT
                     RHGFGYSVFEHTERGIRSELWVYVALDAAVKFAVLKVKNVSDRARRLSATGYVEWVL"
BASE COUNT          227 a          476 c          431 g          214 t
ORIGIN      
        1 ccggttcatc ggccgcggca acaccgtcgc cgacccccag gcgatgagct ggggcgccgg
       61 gtattattcc ggggcgctct cgggcagcga gggctccgtg cttgacccga tcgtcgccat
      121 ccgctgccgc atcacgctcg atccggaaga atcggcgacg atcaacatgg tctccggtgt
      181 cggtgaaacc cgcgacgccg ccttgagcct ggtggaaaaa taccaggatc ggcgcctcgc
      241 ggaccgcgtc ttcgacctgg catggacgca cggccaggtg ctgctgcgcc agttcaatgc
      301 ctcggcggcc gatgcccagc tctacgggcg cctggccgct tcgatcgtct acgcccatgc
      361 gtcgctgcgg gccgacccgg gcgttctcgt caagaaccgc cgcgggcaat ccgggctctg
      421 gggatacgcc atctccggcg acctgccgat tgtgctgctg cagattgaag acccggccca
      481 tatcgaactg gtgcgccaac tcgtgcaggc ccacgcctac tggcgccaga aaggactggc
      541 agtggacctg gtgatctgga acgaagacca cgccggctac cggcagctcc tccacgacca
      601 gatcatgggg ctcatcgccg ccggcaccgg aatcggcctg accgatcggc cgggcggcat
      661 cttcgtaaga ccctccgacc agatatcgga ggaggaccgc atcctgatcc aaacggtcgc
      721 tcgcgccatc atcaccgacc gccgcgggtc gctggcggac cagatcaagg gccgccttcc
      781 ggtggaagca agcgtgcccc tgcttgcccc gacccggacc caccgccccg aacccccggc
      841 ggtgaccgca cggccgcgcc acgatctgac gttttacaac ggactgggcg ggttcacccc
      901 ggatgggcgc gagtatgtcg tcaccaccgc ccacgggcaa ctgacgccgg cgccctgggt
      961 gaatgtggtg gccaactcac agttcgggtc cgtcgtctcg gaaagcggcc ctgcctatac
     1021 ctggagcgag aatgcccacg agttccgcct caccccctgg ggaaacgacc ccgtgagcga
     1081 ttcgggcggg gaggcattct acctccgcga tgaagagcgc ggccacttct ggtcccccac
     1141 gccgctgccc tgccgcgggg ccacgcctta cgtcacccgg cacggattcg gctacagcgt
     1201 cttcgaacac accgagcgcg gcatccgctc cgagctgtgg gtatacgtgg cgctggacgc
     1261 agcggtcaag tttgcggtgc tcaaggtgaa aaacgtatcg gaccgggccc gccggctctc
     1321 cgcgaccggg tatgtggaat gggtgctg
//
LOCUS       DATIFF010001101         1813 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1526951, whole genome shotgun sequence.
ACCESSION   DATIFF010001101 DATIFF010000000
VERSION     DATIFF010001101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1813
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1526951"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..472
                     /locus_tag="VLD58_16070"
     CDS             <1..472
                     /locus_tag="VLD58_16070"
                     /inference="COORDINATES: protein motif:HMM:TIGR04514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GWxTD domain-containing protein"
                     /protein_id="HSB55880.1"
                     /translation="SGLSLSAKREFLTRFWASRDPTPGTPRNEAREAFYQRIDQANRQ
                     FTEIGRTKIPGWRTDRGRVSIVNGDPSEQLDRRVSSGTAPPYLVWRHDRGKPRYYIFA
                     DRTGFGSYQLIASNDLRETGVPGFREILGAEALQDISRWLGVDLFQSDRGGSAN"
     gene            520..1602
                     /locus_tag="VLD58_16075"
     CDS             520..1602
                     /locus_tag="VLD58_16075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55881.1"
                     /translation="MKRVTRRSMALVLAGVAACKGDPTGELRNGVDHLVATPSAIFLT
                     PGTSTNVLVEAVDEQGNREGTHFTLGTVSPEIDVAIDSSFGHIIDNNGNFVLPETVTR
                     LQYVVSPAAAVGNASFEVKAAGKSIVIPVRLVPDSLAATFSNAAPALGDTVTLTTAAP
                     FVFGPAASVTAGGLSALIVSQDAASIRFIPFPGGAPGPVTVNGVGLNYATSLSLNLPS
                     RASFTAPAGLAGTGSLATAPAFTIPPTGTSKLFLDEGATAAVPECTGSALGSPCRVYK
                     ITLAAARSFDMTATWEGTSDIGVYILTSAGNLTTAPGACDDKGSGAAGQPESCTITLG
                     AGTFYLAAFNFSAADPAWIRLDLEGK"
BASE COUNT          291 a          619 c          608 g          295 t
ORIGIN      
        1 gagcgggctc agcctctcgg ccaagcggga gtttctcacc cgtttctggg cctcgcgcga
       61 tccgaccccg ggcacgcccc gcaacgaggc gcgggaagcg ttctaccagc ggatcgatca
      121 ggccaaccgg cagttcaccg agatcggccg caccaagatc cccggctggc gcaccgaccg
      181 gggccgggtc tcgatcgtca atggagatcc ctccgagcag ctcgaccggc gggtctcgag
      241 cgggacggcg cccccgtatc tggtctggcg ccatgaccgt ggcaaaccga ggtactacat
      301 cttcgccgac cgaaccggat tcggcagtta tcagctcatc gcgagcaacg acctgaggga
      361 gaccggcgtt cccgggttcc gcgaaatcct gggcgcggaa gcgctgcagg acatcagtcg
      421 ctggctgggc gtggatctgt tccagagcga ccgcggaggc tccgcgaact gagtgtcgcg
      481 gggcgggcgc cctccctcca ttcccggagg aagtgactca tgaagcgagt gacgcgtagg
      541 agtatggccc tggtgctggc aggagtggcg gcgtgcaagg gagatcccac cggtgagctc
      601 cgcaacggag tcgatcacct ggtggccacg ccgtcggcaa tcttcctcac tcccggcacc
      661 agcaccaacg tcctcgtcga ggcggtggac gagcagggca accgcgaggg cacccatttc
      721 acgctcggga cggtgtcgcc ggagatcgac gtggccatcg actcctcctt cggccatatc
      781 atcgacaaca acggcaactt cgtcctgccg gagacggtga cccggctcca gtacgtggtg
      841 tcgccggcgg cggcagtggg caacgcgtcc ttcgaggtga aggcggccgg gaagtcgatc
      901 gtcattccgg tccggctggt gcccgacagc ctggcggcga cgttctccaa cgccgcgccc
      961 gcgctgggcg ataccgtgac gctcacgacc gccgcgccgt tcgtcttcgg acccgcggcc
     1021 agcgtgactg ccggcgggct cagcgcgctc atcgtgagtc aggacgccgc cagcatcagg
     1081 ttcatcccct tccccggtgg cgcgcctggt ccggtgacgg tgaatggcgt cggcctcaac
     1141 tatgccacct cgctgtccct caatctcccg agccgggcca gctttacggc gccggctggc
     1201 ctggccggca ccgggtcgct cgcgaccgca ccggccttca ccatcccgcc aacgggaacc
     1261 agcaagctct tcctcgatga aggcgctacc gccgcggtgc cggagtgcac cggctcggcg
     1321 ctcggctcgc cctgccgggt ctacaagatc acgctcgccg cggcccgctc cttcgacatg
     1381 acggcgacct gggaggggac ctcggatatc ggagtctaca tcctcacctc ggccggcaac
     1441 ctcaccaccg cgccgggcgc ctgtgacgac aagggctccg gggcggcggg tcagcccgag
     1501 agctgcacca tcaccctggg cgccgggacg ttctacctcg cggcgttcaa tttcagcgcg
     1561 gcggatccgg cctggatcag gctggacctc gaagggaagt agccttccaa ctgcctacca
     1621 cagatggtca cggatggcca cggatgaggg tagctcctca tctgtggcca tcagtctttc
     1681 cccgactgat ggggtactcg gttgcatctg tggtgtgcgg tttgagccat agacggctct
     1741 gcgccgaggg aactcgacgt gattggccgc ggtccagtcg gggatgacga tcgaggagag
     1801 ggtggggggg ctg
//
LOCUS       DATIFF010001102         7172 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1219730, whole genome shotgun sequence.
ACCESSION   DATIFF010001102 DATIFF010000000
VERSION     DATIFF010001102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 7172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7172
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1219730"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..444
                     /locus_tag="VLD58_16080"
     CDS             <1..444
                     /locus_tag="VLD58_16080"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: protein motif:HMM:NF014645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HSB55882.1"
                     /translation="ETLAGELRGRIRGPVAIAHLGLARLEGLVSGKRLEPGSLSGRRV
                     VAASAIADPEGFVAQTKATGAAVQVATWKDHHEYRQEDIAWLAHAARRADHVVITEKD
                     AVKLRDQWPADAPEPLVAVLDLTWEEGGDSIAVALDAVVTPAERL"
     gene            462..1769
                     /locus_tag="VLD58_16085"
     CDS             462..1769
                     /locus_tag="VLD58_16085"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HSB55883.1"
                     /translation="MTSTSPRPSQTVIRPDKDHFLEAENPFEEMMSRFDIAATRLGLE
                     PGLYKILRTPEKQITVAVPVRLDNGEVEVYTGYRVIYNTSRGPAKGGIRFDMQVTQEE
                     VKALAAWMTWKCAVVNLPFGGAKGGVVCDPSIMSNGEIERLTRRYTSGIIETLGPDSD
                     VPAPDVNTNERVMAWVMDTYSMHKRHTVTAVVTGKPIEMGGSLGRREATGRGCMFVTR
                     EALKRLKMPVKGTRVAVQGFGNVGSVAADLMAKQGMTVVAVSDKSGGIYNPKGLDLAE
                     VFEHVRAKKFLNGYKNAQQITNDELLTLDCDVLVPAALENVIHDENAGQIRAKIICEG
                     ANGPTTAAADDILQQKGVFVIPDILANAGGVTVSYFEWVQDRGGYFWDEETVNNRLER
                     IMVNSFDEVANMVDKHGVSSRIGAYMLAIDRVAAVHRLRGMYA"
     gene            1890..2348
                     /gene="rlmH"
                     /locus_tag="VLD58_16090"
     CDS             1890..2348
                     /gene="rlmH"
                     /locus_tag="VLD58_16090"
                     /inference="COORDINATES: protein motif:HMM:NF000986.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HSB55884.1"
                     /translation="MKLTILAVGKLRPVFRNAADEYLARLRRYAITEEVEVREAGKAP
                     TPAEALKQEAERLQGRLPSGAFVVALDREGQGWSSEELALRLGRWRDEGRHLAFVVGG
                     SHGLAPDVVRGAGGRWSLGSLTLPHELARVVVYEQLYRAWTIIRAEPYHK"
     gene            2456..3172
                     /locus_tag="VLD58_16095"
     CDS             2456..3172
                     /locus_tag="VLD58_16095"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSB55885.1"
                     /translation="MAEWFEEWFGEEYLHLYPHRNDADAERVVGLLTRVLPWQRGWRV
                     LDVACGAGRHLAALERAGVVPFGFDLSRALLRRAKACSPRPLVRADMRELPFRPASMD
                     LAVNLFTSFGYFAADEEHQDALGQMLSTVRPGGWFVIDFLNAEQVRASLVPEETMRYG
                     AVSAEVRRRITSDERFVEKTIRLADGRAFQERVRLLGPADLEQMITAHGARVAGRYGD
                     YDGNPLGKGPRTILTAQVPA"
     gene            3169..4698
                     /gene="bshC"
                     /locus_tag="VLD58_16100"
     CDS             3169..4698
                     /gene="bshC"
                     /locus_tag="VLD58_16100"
                     /inference="COORDINATES: protein motif:HMM:NF021586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0071793 - bacillithiol biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol biosynthesis cysteine-adding enzyme
                     BshC"
                     /protein_id="HSB55886.1"
                     /translation="MSLRIVTTPLAASLGWPEPRQGGVDPALLDAFVCAGGTDGVLER
                     LRNPSTLVVTTGQQPGLLTGPLYTIHKALSAVALARLCEERWRRPVVPVFWAAGGDHD
                     FSEGNHASWIGADGSTVTMTLRERAPDAPLTPLYREPVGPEILPVLERLELDLAQTAF
                     GGEVMALFRRWYRPEANLAGSCAHVIAELLAPFGVLVFDATHPAVKQAQMPHLLRALE
                     RNQALDQALDERHRQLSAAGRDPGVTVGDGATLVMFEGVQGRDRLVARSPGFQTRRSQ
                     EQLSLAEVERFAAQEPGRFSPNVLLRPAIESALLPTVAYLAGPGELRYLALAETVYSL
                     LSIPRQLPLPRWSGVLVDARVDRVLEKYKATLTELMEPAQRLEARVVRDQLPPEARQA
                     LEVLRASITQGYETLAGSARAIDPTIEKPMRNLAARAISDTQDAEKKLVNHLKKRQEV
                     ETQQIARARELVLPLGRPQERVHTIAPWLARYGPSLLADLEATMRDWYRTGLEALGGP
                     P"
     gene            4708..4986
                     /locus_tag="VLD58_16105"
     CDS             4708..4986
                     /locus_tag="VLD58_16105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55887.1"
                     /translation="MAFLGILLLVALMIPIIGIVIDSPIGRAIARRVEGPEQIPANVA
                     DLARKLEALEGEVDDLQRNVQALQEENQFLQRLLEENPRSSLPPPPKP"
     gene            5028..6554
                     /gene="murJ"
                     /locus_tag="VLD58_16110"
     CDS             5028..6554
                     /gene="murJ"
                     /locus_tag="VLD58_16110"
                     /inference="COORDINATES: protein motif:HMM:TIGR01695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HSB55888.1"
                     /translation="MAAGIFLSRIFGLVRQRVLAHYLGLSDAADALQAAFRIPNLLQN
                     LLGEGVLSASFIPVYARLRAEGKNQEAEQVANAVFGLLAFAASVIVLGGVAGAAPLTD
                     LITGGFEGEKRELTIRLVRLLFPGAGLLALSAWCLGILNSHRRFFLSYAAPVVWNLAI
                     IATVRLSPSRQDENSAAVAAALGAVLGSALQFLVQLPRVLTLIRQFRPTVSTSSPEVR
                     TVLSNFAPVFVSRGVVQLSAFVDTIIASFLGQGPLAALGTAQTLYTLPVSLFGMSVSA
                     AELPAMSSATGSDSEIAAALRARLESGLRRIAYFVVPSAAAFLAFGGVIAGALFQTGK
                     FTAADSSYVWSILAGSSVGLLAATLGRLYSSAYYALRDTRTPLRFAVLRVILTTVLGY
                     LCAIPLPGLLGLDPRWGAAGLTASAGVAGWVEYFLLKRGLERRIAAPGVPPAYLARLW
                     GGALLGAAVGLGVWYFTPGMHPILRAALVLAPYGVIYLGSTTLMGIPEARSLFRRFVR
                     "
     gene            6586..>7172
                     /locus_tag="VLD58_16115"
     CDS             6586..>7172
                     /locus_tag="VLD58_16115"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HSB55889.1"
                     /translation="MADALPEALQRKLDTLPDAPGVYLWKDAQGGVLYVGKAKRLRSR
                     VRSYFAGDAAASLKNVYLQRYIADVETIVVTSEAQSLLLENNLIKEYQPRFNVRLKDD
                     KSYPSIAVTLGEPFPRVLVTRRRDIPGARYFGPYTDVALLRKTLAIVRRLYTVRSCQD
                     NLPKDRRERPCLDYYIGRCRAPCVLWQTQEEYRLM"
BASE COUNT         1099 a         2467 c         2408 g         1198 t
ORIGIN      
        1 gagacgctgg cgggcgagct gcggggacgt attcgcgggc cggtggcgat cgcgcatctc
       61 ggccttgccc ggctggaggg cctggtttcc gggaagcggc tggagccggg atcgctctcg
      121 ggccggcggg tggtcgcggc ctcggcgatc gccgatcccg agggctttgt ggcccagacc
      181 aaggcgaccg gcgccgcggt gcaggtggcg acctggaagg atcatcacga gtatcgccag
      241 gaggatatcg cctggctggc ccatgccgct cggcgggccg accatgtggt catcaccgag
      301 aaggacgcgg tgaagctgcg cgaccagtgg ccggccgatg cacccgagcc gctcgtggct
      361 gtgctggatc tcacgtggga ggaaggcggc gactctatcg ccgtggcgct cgatgcagtg
      421 gtgacaccgg ccgagcgcct gtaacgtcta acggagaagc tatgacttcg accagtccgc
      481 gacccagtca aaccgtcatc cggcccgaca aggaccattt cctcgaggcg gagaacccgt
      541 tcgaggagat gatgtcgcgc ttcgacatcg cggccacccg gctgggcctc gaacccggcc
      601 tctacaagat cctccgcacg ccggagaagc agatcaccgt cgccgtgccg gtccggctcg
      661 ataacggcga ggtggaggtc tacaccggct accgggtcat ctacaacacc tcccgcgggc
      721 cggccaaggg cggcatccgg ttcgacatgc aggtcaccca ggaagaggtc aaggcgctcg
      781 ccgcctggat gacctggaag tgcgcggtgg tgaatctgcc gttcggcggg gccaagggcg
      841 gggtggtgtg cgatccctcc atcatgagca acggtgagat cgaacgcctc acccgccgct
      901 acacctccgg catcatcgag acgctgggcc ccgacagtga cgtccccgcg cccgatgtga
      961 acaccaacga gcgggtcatg gcatgggtga tggacaccta ttccatgcac aagcggcaca
     1021 ctgtgaccgc cgtggtcacc ggcaagccga tcgagatggg aggctccctg ggccgtcgcg
     1081 aggcgaccgg ccggggctgc atgttcgtca cccgcgaagc gctcaagcgc ctcaagatgc
     1141 cggtcaaggg gacccgggtt gcagtgcagg gcttcggcaa cgtgggctcc gtggccgcag
     1201 acctcatggc caagcagggc atgaccgtcg tggccgtgag cgacaagtcg ggcggcatct
     1261 acaatcccaa gggcctcgac ctggccgagg tcttcgagca tgtccgcgcg aagaagttcc
     1321 tcaacggcta caagaatgcc cagcagatca ccaacgacga gctgctcacc ctcgattgcg
     1381 acgtgctggt cccggccgcg ctcgagaacg tgatccacga cgagaacgcc ggccagatca
     1441 gggccaagat catctgcgaa ggggccaacg gccccaccac cgcggcagcc gacgacatcc
     1501 tccagcagaa gggcgtcttc gtcatcccgg acatcctcgc gaatgccggc ggtgtaaccg
     1561 tcagctactt tgagtgggtc caggaccggg gcgggtactt ctgggacgag gagaccgtga
     1621 acaaccggtt ggaacggatc atggtgaact cgttcgacga ggtcgccaac atggtcgaca
     1681 agcacggtgt ctcgagccgt atcggggcct acatgctggc gatcgaccgg gtcgccgcgg
     1741 tgcaccgcct gcgggggatg tacgcctgag gtccctgaag gactccctca cgccgggttg
     1801 cgcggcgcgc tcccgaaggc gctcggtcgc aggcgggcag gcggtcaggc ggacagcgcc
     1861 gttggcgctg tccgcctgtc tgttggacgg tgaagctcac gatcctcgct gtcgggaagc
     1921 tgcgccccgt cttccgcaat gcggccgacg agtatctcgc tcgcctgagg cgctacgcga
     1981 tcacggaaga agtcgaggtg cgtgaagccg gcaaggcgcc gacgccggcc gaggcgctca
     2041 agcaggaagc cgagcggctg cagggcaggt tgccgtcagg agcgttcgtc gtcgccctcg
     2101 atcgcgaagg gcagggttgg agcagcgagg aactggccct ccgcctgggc cgctggcggg
     2161 acgagggtcg ccatctcgct tttgtagtcg gagggtccca cgggcttgcc ccagacgtgg
     2221 tgcggggggc cggcggccgc tggagcctgg gcagcctcac cctgccgcac gaactcgccc
     2281 gggtggtggt gtacgagcag ctctatcggg cctggactat catccgggct gaaccgtacc
     2341 acaaataggc cgttggccgt tggccactgg ccgttagctt accccgcttc tgcatgcacc
     2401 agctaagaac ttcggcgccg cggcggaatt gccaacggct aacggctaat ggctaatggc
     2461 tgaatggttc gaagagtggt tcggcgagga gtacctccac ctctatcctc accgcaatga
     2521 cgccgatgcc gagcgagtcg tcggcctgtt gacccgggtg ctcccctggc agcgcggctg
     2581 gcgggtgctc gatgtggcct gcggcgccgg gcgccatctc gccgccctcg agcgggccgg
     2641 cgtggttccc ttcggcttcg acctctccag agcactcctc cgccgcgcca aggcctgttc
     2701 cccgcggccc ctcgtccggg ccgatatgcg cgaactcccg ttccgccccg cctccatgga
     2761 cctggcggtg aatcttttca ccagcttcgg ctactttgcg gcagacgaag aacaccagga
     2821 cgccctcggc cagatgctct cgacggtgcg cccgggcggc tggttcgtga tcgactttct
     2881 caacgccgaa caggtgcggg cctcgctggt gccggaggag acgatgcgct acggcgccgt
     2941 cagcgccgag gtccgccgcc gcatcaccag tgacgagcga ttcgtggaaa agaccatcag
     3001 gctggccgac ggccgcgcat tccaggagcg ggtgcgcctc ctgggaccgg cggacctgga
     3061 acagatgatt accgcccatg gcgcccgggt tgccggccgc tacggcgact acgacgggaa
     3121 cccgttgggg aaggggccga ggaccatcct cacggcccag gtgccggcat gagcctgcgt
     3181 atcgtcacca cgccgctcgc ggcatcgctc ggctggcccg agccgcgcca gggcggggtc
     3241 gatccggcgc tgctcgacgc cttcgtctgt gccggcggga ccgacggagt cctcgaacgg
     3301 ctccgcaacc cttccacgct ggtcgtcacc accgggcagc agcccggcct cctcaccggt
     3361 ccactctaca ccatccacaa ggcactctcg gccgtcgcgc tggcccgcct gtgcgaagag
     3421 cgctggcgcc gcccggttgt gccggtattc tgggccgccg ggggtgacca tgatttttcc
     3481 gaggggaatc acgccagctg gatcggggcc gacggctcga ccgtcacgat gaccctgcgc
     3541 gagcgggcgc ccgatgcgcc gctcaccccg ctgtaccgcg aaccggtggg tccggaaatc
     3601 ctgccggtgc tcgagcggct ggaactggac ctggcccaga ccgctttcgg cggcgaagtc
     3661 atggcgctgt tccgccgctg gtaccgaccc gaggccaatc tcgccgggag ctgcgctcac
     3721 gtcatcgcgg agctgctggc gccgttcggg gtgctggtgt tcgatgccac ccatccggcg
     3781 gtcaagcagg cgcaaatgcc gcacctgctg cgggccctgg agcggaatca ggccctggac
     3841 caggcgctcg acgagcgtca ccggcagcta tcagcggccg gccgcgatcc gggcgtcacg
     3901 gtgggagatg gcgcgaccct ggtgatgttc gagggcgtcc agggccgtga ccgtctggtg
     3961 gcgcgctcac ccggcttcca gacccgccgg agccaggagc aactctcgct cgccgaggtc
     4021 gaacgctttg ccgcgcagga gccggggcgc ttctcgccca acgtcctgct tcgacccgcg
     4081 atcgagagcg ccctgctgcc gacggtcgcc tacctcgcgg gtccggggga actccgctac
     4141 ctcgcgcttg ccgagacggt gtactcgttg ctttcgattc cgcgacagct gccattgccg
     4201 cgctggtcgg gtgtcctggt cgacgcccgg gtggatcggg tgctcgagaa gtacaaggcg
     4261 acgctcaccg agctgatgga gccggcccag cgcctcgagg cccgggtggt gcgcgaccag
     4321 ctgccccccg aggcgcgtca ggcgctcgag gtgctccggg cgtcgatcac ccaagggtac
     4381 gagacgctcg cgggtagcgc gcgggccatc gatccgacta tcgagaagcc gatgcggaac
     4441 ctcgccgctc gcgcgatctc cgatacccag gacgccgaga agaagctggt caaccacctc
     4501 aagaaacggc aggaggtgga gacccagcag attgcccggg ccagggaact ggtgctcccc
     4561 ctgggccgcc cccaggagcg ggtgcacacc atcgccccgt ggctggcgcg ctacgggccg
     4621 tcgctcctcg ccgacctgga ggccaccatg cgcgactggt accggacggg ccttgaagcc
     4681 ctcggcggac ccccgtagac tcggatcatg gccttcctcg gcattctgct gctcgtcgcc
     4741 ctgatgatcc cgattatcgg gatcgtgatc gattctccca tcggccgcgc catcgcgcgc
     4801 cgggtggagg gtccggagca gatccccgcg aacgtggccg acctggcccg caaactcgag
     4861 gcgctcgagg gtgaggtcga tgacctccag cgcaacgtgc aggcgctcca ggaggagaac
     4921 cagttcctcc agcgtctgct ggaggagaat ccccgctcct ctcttccgcc gccgcccaag
     4981 ccctgagcca gtcttccgca ggcccccgtg gctcccactc cgtcctggtg gcggcgggga
     5041 tcttcttgag ccgcatcttc gggctggttc gccagcgggt gctggcgcac tacctcggtc
     5101 tctccgatgc ggcggatgcg ctccaggccg ccttccggat tcccaacctc ctccagaatc
     5161 tgctgggcga aggggtgctc tccgcctcct tcatcccggt gtacgcccgg ctgagggccg
     5221 aagggaagaa tcaggaagcg gagcaggtgg cgaatgcggt cttcgggctt ctggcgttcg
     5281 cagcgtcagt catcgtgctg ggcggtgtcg cgggcgccgc gccgctcacc gacctcatca
     5341 ccggcgggtt cgagggcgaa aagcgcgagc tcacgatccg cctggtccgc ctcctgttcc
     5401 ccggcgccgg cctcctggcg ctttccgcct ggtgtcttgg catcctcaac agccaccgcc
     5461 gattttttct ctcctacgcc gcgccggtcg tctggaatct cgcgattatt gcgacggtga
     5521 ggctttcccc gtcacgacag gacgagaatt cggcggcggt cgcggccgcg ctgggcgccg
     5581 tcctcggcag cgcgttgcag tttctggtac agctgccgag ggtcctcaca ctgatccgcc
     5641 agttccggcc gacggtcagc accagctcgc ccgaagtccg caccgtcctg agcaactttg
     5701 ccccggtctt cgtaagccgc ggcgtggtgc agctcagcgc gttcgtcgac acaatcatcg
     5761 cgagcttcct ggggcagggt cccctggccg ctttgggaac ggcccagacg ctctacaccc
     5821 tgccggtgag tctcttcggc atgtcggtga gcgcggccga gttgccggca atgtcgagtg
     5881 cgacagggag cgacagcgag atcgcggccg cgcttcgagc ccggctggag agtggcctcc
     5941 gccgcatcgc ctatttcgtg gtgccctctg cggcggcgtt cctggcgttc ggtggcgtga
     6001 tcgccggggc gctctttcag accggcaagt ttactgctgc tgacagcagt tacgtctggt
     6061 cgatcctggc cggatcctca gtgggactcc tcgccgccac cctggggcgc ctctacagct
     6121 cggcctacta cgcgctgcgc gacacccgca ccccactccg tttcgccgtg ctccgagtga
     6181 ttttgacgac cgtgctgggt tacctgtgcg ccatcccgct tcccgggctg ctcggcctcg
     6241 atccgcgctg gggcgccgcc ggactcaccg cctccgccgg ggtggctgga tgggtcgagt
     6301 acttcctgct caagcgcggt ctcgagcgtc gtatcgccgc gccgggcgtc ccgccggcgt
     6361 acctcgcgcg cctctggggc ggagccttgc tcggtgcggc ggttggtctc ggcgtgtggt
     6421 acttcacgcc cgggatgcat cccatcctcc gcgcagccct cgtgctggcg ccctatggag
     6481 tcatctacct ggggtccacc acgctgatgg gaatccccga ggcccggagc ctcttccgcc
     6541 gattcgtccg ctgaacccgg ttgaccgcgc ccttacgttc cagtcatggc ggacgccctt
     6601 cctgaagccc tgcagcgcaa actggacacc ctccccgacg cccccggcgt ctatctgtgg
     6661 aaggatgccc agggtggggt gctgtatgta ggcaaggcca agcggctcag gagccgggtc
     6721 cggagctact tcgcgggcga cgcggcggcc agcctcaaga acgtatatct ccagcgttac
     6781 atcgccgacg tcgaaaccat cgtcgtcacc agcgaggcgc agtcgctgct cctcgagaac
     6841 aacctgatca aggagtacca gccccgcttc aacgtccgtc tcaaggacga caagagttac
     6901 ccgtcgatcg ccgtgaccct gggtgagcca ttccccaggg tgctggtgac ccggcgccgt
     6961 gacatcccgg gcgcccgcta tttcgggccg tacaccgatg tggccttgct ccggaagacg
     7021 ctggccatcg tgcgccggct ctacaccgtc cggagctgcc aggacaatct cccgaaggac
     7081 cggcgggagc ggccctgtct cgactactac atcggccggt gtcgcgcgcc ctgcgtcctg
     7141 tggcagacgc aggaggagta ccggctcatg at
//
LOCUS       DATIFF010001103         8221 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_908945, whole genome shotgun sequence.
ACCESSION   DATIFF010001103 DATIFF010000000
VERSION     DATIFF010001103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 8221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8221
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_908945"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            77..1210
                     /locus_tag="VLD58_16120"
     CDS             77..1210
                     /locus_tag="VLD58_16120"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB55890.1"
                     /translation="MSASTPLPVALFNTRFLPYSQTFVYEEIRHHERYAAEVFCGVRM
                     LPERFPWSPVFVGGPLYRVTRRSGRFDARFRERNYAVVHAHFGPGAVYALPFARRHRL
                     PLLVTFHGYDVPILASPRRWLPEHLRYALLGPAVLREMTLGLCASGELLELLAAQGVD
                     PDRLRVHRLGIDVDAFRPGARNPAPDSVVMIGRFIEKKGFEYGLRAFAAVASDVAGLR
                     LTLIGEGDREPALRAIVREAALEDRVTFAGVLPPDRVAALLGTAHVLLAPSVVERGSG
                     NRESGLIVVKEASASGAVPIGTLHGGIPEIIDDGVTGYLVPERDVDTLADRLRRVVTS
                     PPLCQQLGRAAREKMLQEYDNRVRVRALEGLYDEARARHRAGR"
     gene            1219..2724
                     /locus_tag="VLD58_16125"
     CDS             1219..2724
                     /locus_tag="VLD58_16125"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HSB55891.1"
                     /translation="MLLAFWCAIEAWLVQELTLMSPQAQRSFDPYLDRGLRFAFSLLA
                     FAALIAFLPVPFLVLWFAGSALCYLVVLTYYDASRQPLSLLVVRRRAEHAPLAAITLS
                     HARSSHLLLLASLVFKGLFLFGLTSPRPTLAAGSICLALYLALLLVVNRRYRPLARIA
                     GWETVGGLGAVYGYLPAWWAEWRWIDSPALLERALARAAEGTDRLTPVETPAPIANCM
                     VFLQVERLDWAILDFQIRGQDVTPQLNAFARRAMRYAVRPDRCIGSADADFIMLTGNA
                     PSADLPTCKIPGYPYHDTIVHRMTELGFGSTVMHGASGDLFGRRTAYSQVGFERLFFR
                     EEFEALGPTPLAGWSVPDDDLLQFAAMDFTARNGRQFQLAITATSQPLFHNYDRGLAR
                     FFPGSAQQSEQYFDVMHYVDSAIGRYLQALPAETTVVLYGSRTSGVEHRGVGYRSRPA
                     DGPGLVPFLVLETGRDLSLLQRTGDSARQGEFTLQDAARWIHASLALQRTG"
     gene            2799..3539
                     /locus_tag="VLD58_16130"
     CDS             2799..3539
                     /locus_tag="VLD58_16130"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSB55892.1"
                     /translation="MHQWLLLVGTIALIAGGMFFALRSVVTSIQRESDIRYRRTEAWL
                     AIYSVIQPRVPFPTIQPYMATPELLRHVIHQVLERKPGLIVELGSGISTLIAAYGAEQ
                     LGKCQIISVDHEARFRDATQATLAAHGLSHRVKLIHAPLVPVQSGSLRSQWYDPNIIR
                     AAIQESGAEIGMLLVDGPPGMDQKLARLPAVPQLHDRLAADCVVLVDDARRADEQEMV
                     RQWMQQFPGWDREFVETEKGLILLRRSR"
     gene            complement(3536..4447)
                     /locus_tag="VLD58_16135"
     CDS             complement(3536..4447)
                     /locus_tag="VLD58_16135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55893.1"
                     /translation="MFGPLEDWLKRLEVRLNRPLFHLEPAAAFWSLYQDPAGPLTGAP
                     PSLTRASAAPCDLLIAITTYNRAESCARLLAALPETLAQAGRSLRLHLVVLQDGPDGD
                     YAAAQALAATLFGERLTWLTARERLGKRGYWKAYQTLFLAAESLRPAHALFLQDDLEF
                     EPSFLGECYRRWEALAGDAGRRVLYLFASDDDEPEGRWVKFRREEARAGARLTRWFDL
                     QGYFVDRAFFDLLRYRMFAVSDRRWLKQPYSSGVGEQLTRRLFPRASVYQAHPSLVYH
                     GAHASEMNPEARSARSLDNRPAPSPRD"
     gene            complement(4449..5948)
                     /locus_tag="VLD58_16140"
     CDS             complement(4449..5948)
                     /locus_tag="VLD58_16140"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HSB55894.1"
                     /translation="MPTANGRENCTLTSPIDARHELKRGLWWMGGATLAMRLLDVAGT
                     LIVLQFLGPREMGVATLAWSLSVAMEAFNGLGVGQVLVRQKEMSHRELSGLFWFCTLL
                     GLAAVAVMAAVAPFVAVFYADWRLYPMIVVAATKLIFVGAALVPLQLLTRDLDFKTSG
                     AAQTIATLGESVTKVVLVLAGLGAWGLVLANAGRGLFLMVALWRLAPFRPSFTAADDS
                     TRRSIRFGLRVAAGSIIYQVYRNMDFLLVGRFLGTSAVGIYRVAWDLGMTPLEIVVNL
                     VNRVQYPIYAKLQEHAEELKAAFYRSAQSLLLTLGPVVALICFASPDILSLIGHGRWL
                     AAAPLVQILVWASLLRGVAQLFPALYIATGHPHYTVYDSLVTGGTLVLGFLLALVIAP
                     PETATIWVALVWLLSYPLALALHFTLVRRTAPITPGSMARSLASAALGLLVMSLVLAV
                     ASTLRALVGSPVLTLVMLVTVGLATYMVFLRKVLHLKPGHLLPRRAEES"
     gene            6087..7316
                     /locus_tag="VLD58_16145"
     CDS             6087..7316
                     /locus_tag="VLD58_16145"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB55895.1"
                     /translation="MAPAPMHIVYLYDAILPDTGADTEQVVNTVAALSRQRMTLTLLV
                     PGAASGPGDSEALKQYYQVQGTFGVERLKYRYHGLRGFEKWSHALRAAQHPLVAGADL
                     VYTRNLPAAWSLLRAGRRVVYEHFRPWGDQHPPLQPFLRHVLRHPNLVGAIFHSHHAL
                     QSYLRLGIAESRLLVAHNGWDPARMEPRLTRAAARSALGLEPGRFTVVYSGRMNQRKG
                     LDVILECARQAPEFAFVLVGSEGEGPVEREARTLSNVRIVPWQRFTDLAPWLYAADVL
                     VIPPSLAPLERHGNTVLPIKLFLYLAAGRVILAPVAPDTAELLVDGENAALVPPGNVA
                     AIVTRLRSLAADSAQVERLSSGARTTAEDLTWDARAAHIAGFIRARLDANPEPPRHDP
                     WRLGAWLAEVGRWSLGR"
     gene            7588..>8221
                     /locus_tag="VLD58_16150"
     CDS             7588..>8221
                     /locus_tag="VLD58_16150"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HSB55896.1"
                     /translation="MSTSARVKRALASADIAHRDRAFVEVLSRLAGRLRRIAAAPGHD
                     VLVLGGGATAATEAALATFVGSDERLLVVSNGAFGERIAEMAQCLGISMSHLRYDWGE
                     PIVLEQLQGMLDGDPRIRAVAMVHHETSVGRLNPVNEVGRLLAPRHLRYFVDVVSSLG
                     AEDFDMVKSRASVVIGSSNKCLHGVAGAAFVIARPEIWSETEHVRPRSMYL"
BASE COUNT         1288 a         2997 c         2655 g         1281 t
ORIGIN      
        1 agaccctctg ggactacctg atcgagagtg accgggtctg gttccggcag cggagcgccg
       61 agccggggcc gcacccatga gcgcatccac cccgttaccg gtggcgctct tcaacacccg
      121 gttcctcccc tactcccaaa ccttcgtcta tgaggagatc cgtcaccacg agcggtatgc
      181 cgcggaggta ttctgcgggg tccgaatgct gccggaacga tttccctgga gcccggtgtt
      241 cgtgggcggg ccgctctacc gcgtcacccg gcggtcaggc cgcttcgacg cgcgcttccg
      301 ggagcgcaac tacgccgtgg tgcatgccca cttcggcccg ggcgcggtct atgccctgcc
      361 ctttgcccgc cgccaccggc ttccgctcct ggtcacattc cacggctacg acgttcccat
      421 tctcgcgagc ccgcgccgct ggctgcccga gcacctccgc tacgcgctgc tcgggcccgc
      481 ggtgctccgc gagatgactc tcgggctgtg tgcctctggc gaactcctcg agctcctggc
      541 ggcgcagggt gtcgatcccg accgcctccg ggtgcaccgc ctcggcatcg atgtcgacgc
      601 tttccgcccc ggcgcccgca acccggcgcc cgacagcgtg gtgatgatcg gccgcttcat
      661 cgagaagaag ggcttcgaat acggactccg ggcctttgcc gcggtggcca gcgatgttgc
      721 gggtctcagg ctcaccctca tcggcgaagg agaccgcgag cccgccctcc gggccatcgt
      781 ccgggaggcc gcgctggaag accgggtgac gttcgcggga gtcctcccgc ccgaccgggt
      841 cgccgcgctg ctcgggaccg cccatgtgct gctggccccg agtgtggtcg agcgcggctc
      901 ggggaaccgg gaatcgggac tgatcgtggt gaaggaggcg agcgcctcgg gtgccgtgcc
      961 gatcggcacg cttcacggcg ggatacccga aatcatcgat gacggcgtga ccggctacct
     1021 cgtgcccgaa cgcgatgtcg acaccctggc cgatcggctg cgccgggtgg tgaccagccc
     1081 gccgctctgc cagcagctgg gccgcgcggc ccgcgagaag atgctccagg aatacgacaa
     1141 ccgggtccgg gtccgggcac tcgagggtct ctacgacgag gcccgcgccc gccaccgggc
     1201 cgggcgctag gccggccgat gctcctggca ttctggtgcg cgatcgaggc ctggctggtg
     1261 caggagctca ccctcatgtc tccccaggcc cagcggagtt tcgatcccta tctcgatcgc
     1321 ggcctccgct tcgctttcag tctcctggcc ttcgccgcgc tgatcgcctt cctcccggtc
     1381 ccgtttctgg tcctctggtt cgccggctcg gccctgtgct acctcgtggt cctcacctat
     1441 tacgacgcca gccggcagcc gctgtcgctg ctggtcgtgc gccgccgagc cgaacacgct
     1501 cccctcgccg cgatcacgct ctcgcacgcg cgctccagcc acctgctgct cctcgccagc
     1561 ctggtcttca aggggctctt cctcttcgga ctgaccagcc cccgcccgac gttggcggcc
     1621 gggagcatct gcctggcgct gtatctggcg ctgctcctgg tggtgaaccg tagataccgg
     1681 ccgctcgcgc gcatcgcagg ctgggagacg gtgggcggtc tcggggccgt atacggctat
     1741 ctcccggcct ggtgggccga atggcgctgg atcgattcgc cggctctgct cgagcgcgcg
     1801 ctggcgcgcg ccgccgaggg gaccgaccgg ctcacgccgg tggagacgcc cgcgccgatc
     1861 gccaactgca tggtgtttct ccaggtcgag cggctcgact gggctatcct cgatttccag
     1921 atccggggcc aggacgtgac cccgcagctc aatgccttcg cgcgccgcgc gatgcgctac
     1981 gcggtccgcc ccgatcgctg catcgggagc gccgacgccg atttcatcat gctgaccggc
     2041 aacgcgccct cagccgacct ccccacctgc aagatccccg ggtaccctta ccacgacacc
     2101 atcgtgcacc ggatgacgga gctgggattc ggctcgaccg tcatgcacgg tgcctcgggc
     2161 gacctcttcg gccgccgcac cgcctacagc caagtgggat tcgagcggct gttcttccgg
     2221 gaagagttcg aagccctggg cccgacgccg ctcgcgggct ggagtgtccc ggacgacgac
     2281 ctgctccagt tcgccgcgat ggacttcacc gcccggaacg gtcgccagtt ccagctcgcc
     2341 atcaccgcca ccagccagcc gctgttccac aactacgacc ggggcctcgc ccgcttcttc
     2401 ccgggctccg cccagcagtc ggagcagtac ttcgacgtga tgcactacgt cgactccgcc
     2461 atcgggagat acctccaggc gctgccggcc gaaaccacgg tggtgctcta tggcagccgc
     2521 acctccgggg tcgagcatcg gggggtcggc taccggagcc ggcccgccga cggccccggg
     2581 ctggtgccgt tcctggtgct cgagaccggg cgcgatctct ccctgcttca gcgcaccggc
     2641 gactccgccc gccagggtga gttcaccctc caggatgccg cccgctggat ccacgcgagc
     2701 ctcgcgctgc agcggaccgg ctagcccggc cggcgtggcg gattcgcccc caaccgacga
     2761 tgttgttgct ccagtttgcc cactccgagg cctccgcaat gcaccaatgg ctgctgctgg
     2821 tcggcaccat cgccctcatc gcgggcggaa tgttcttcgc tctccgatcg gtggtcacct
     2881 ccattcagcg ggaaagcgac atccgctacc gccgcaccga ggcctggctc gcgatctaca
     2941 gcgtgatcca gccccgggtg ccgttcccga ccattcagcc ctacatggcc accccggagc
     3001 tcctccgcca cgtgattcac caggtcctcg agcggaaacc cgggctgatc gtcgagctgg
     3061 ggagcggcat ctccaccctg atcgccgcct atggcgccga gcagctgggc aagtgccaga
     3121 tcatctcggt ggaccatgag gcccgcttcc gcgacgcgac ccaggccacc ctggccgcgc
     3181 acgggctctc gcaccgggtg aagctgattc acgcccctct ggtccccgtc cagagcggca
     3241 gcctgcgctc ccagtggtat gaccccaaca tcatccgcgc ggcgatccag gaatcgggcg
     3301 ccgagatcgg gatgctgctg gtggacggtc cgccgggcat ggatcagaag ctggcgcggc
     3361 tccccgccgt gccgcagctt cacgatcgcc tcgccgccga ttgcgtggtg ctggtggatg
     3421 acgcccgccg ggccgatgag caggagatgg tgcggcagtg gatgcagcag ttccccgggt
     3481 gggaccgcga attcgtcgag accgagaagg gactgatcct cctccgccgc tcacgctagt
     3541 cgcggggaga aggggcgggg cgattgtcga gtgaacgcgc cgagcgggcc tcggggttca
     3601 tctcgctggc atgggcgccg tggtagacca gggacggatg ggcctggtag acgctggcgc
     3661 gagggaagag gcggcgggtg agctgttcac ccacaccgct cgaatacggc tgcttgagcc
     3721 agcgccggtc cgacaccgcg aacatccggt agcgaagcag gtcgaagaag gcccggtcga
     3781 cgaaataccc ctgcagatcg aaccagcggg tgagccgggc gccggcgcgc gcttcctccc
     3841 gccggaactt cacccaccgt ccctccggct catcgtcatc cgacgcgaag agatagagca
     3901 ccctgcgccc ggcatccccg gccagcgcct cccaccggcg ataacactcg ccaaggaatg
     3961 acggctcgaa ctcgagatcg tcctgcagga acagcgcatg ggcgggccgc agcgactcgg
     4021 cggcgagaaa gagcgtctgg tacgccttcc agtatccccg cttcccgagc cgttcccgcg
     4081 cggtgagcca ggtgaggcgc tccccgaaga gcgtggcggc cagcgcctgc gcggcggcat
     4141 agtcgccgtc gggcccgtcc tgcagcacca ccaggtgaag tcgcagggag cgccccgcct
     4201 gcgccagcgt ctccggcagg gcggccagca gccgggcgca gctctcggcc cggttgtagg
     4261 tggtgatggc gatgagcagg tcgcacggcg cggcggaggc ccgcgtcagg ctcggcggcg
     4321 caccggtgag cggaccagcc gggtcctggt acagcgacca gaaggcggcg gcaggttcca
     4381 ggtgaaagag cggccggttg agccgaacct cgagccgctt gagccagtcc tccaacggtc
     4441 cgaacatctc agctctcctc ggcgcggcgc ggaagcagat gacccggctt gaggtgcagc
     4501 acctttctca ggaagaccat gtaggtggca agccccaccg tgaccagcat gaccagcgtc
     4561 aggaccggcg agccgaccag ggcgcgaagg gtcgaagcca ccgccagcac cagcgacatc
     4621 accaggagcc ccagagccgc cgacgcgaga ctccgcgcca tgcttcccgg cgtgatcggc
     4681 gcggtgcgcc gaaccagcgt gaaatggagc gccagcgcga gcggatagct gagcagccag
     4741 accagggcca cccagatcgt tgccgtctcc ggcggcgcga tcaccagcgc cagcaggaag
     4801 cccagcacca gggtcccgcc ggtcaccagc gagtcataca ccgtgtagtg cggatgaccc
     4861 gtggcgatgt agagcgcggg gaacagctgg gccacgccgc ggaggagact cgcccacacc
     4921 aggatctgca ccagcggcgc cgccgcaagc cacctcccgt ggccaatgag gctcagaatg
     4981 tcgggactgg caaagcagat cagcgccacc accggaccga gggtgagcag cagcgactgc
     5041 gcactccggt agaacgccgc cttgagctcc tccgcgtgct cctggagctt ggcgtagatc
     5101 gggtactgca cccggttcac caggttgacc acgatctcga gcggcgtcat gcccaggtcc
     5161 cacgccaccc ggtagatgcc caccgcactg gtgcccagaa agcggcccac cagcaggaag
     5221 tccatgttgc ggtagacctg gtagatgatg ctccctgccg cgacccggag cccgaaccgg
     5281 atggaacgcc gggtggagtc atccgcggcg gtgaacgagg gccggaacgg ggccagtcgc
     5341 cagagcgcca ccatgaggaa gagcccgcgc cccgcgttgg ccagcaccag accccaggcg
     5401 ccgagacccg ccagcaccag gacgaccttg gtgaccgatt cgcccagcgt ggcgatcgtc
     5461 tgggccgcac ccgaggtctt gaagtcgaga tcgcgggtca gcagctggag cggcaccagc
     5521 gccgccccca cgaagatgag cttggtcgcc gccaccacga tcatgggata gagccgccag
     5581 tcggcgtaga acaccgccac gaacggcgcc accgcggcca tgaccgcgac cgccgccagg
     5641 ccgagcaggg tacagaacca gaacagcccg gaaagctccc ggtgcgacat ttccttctgc
     5701 cggaccagca cctggcccac gccgaggccg ttgaatgcct ccatcgccac cgacaagctc
     5761 cacgccaggg tggcaacgcc catctcgcgc gggccgagga actgcagcac gatgagcgtg
     5821 ccggccacgt cgagcagccg catggccagc gtcgcccctc ccatccacca gaggccccgc
     5881 ttcagttcat gccgtgcgtc gatgggggag gtcagggtgc agttctcccg gccgttagcc
     5941 gtcggcactt ggccgttagc acttggccgt tggccgttag ccgttagcct ttagctgctt
     6001 ctttgaggtg ttccagtttc cgggcctatg ctgtcgaaca gatccccact tagcgcagtc
     6061 agctaacggc taatggctaa cggctaatgg ccccagcgcc aatgcacatc gtctacctct
     6121 acgacgccat cctgcccgac accggtgccg acaccgaaca ggtcgtcaac accgtggcgg
     6181 cgctatcccg ccagcgcatg accctcacgc ttctcgtccc cggcgccgcg agtggcccgg
     6241 gcgacagcga agcgttgaag cagtattacc aggtacaggg aaccttcggc gtcgaacggc
     6301 tcaagtaccg ctaccacgga ctccggggct tcgagaagtg gtcgcacgcc ctccgggccg
     6361 cgcagcaccc tctggtcgcg ggcgccgacc tggtctacac ccggaatctt cccgccgcgt
     6421 ggagtctgct ccgcgccggc cgccgcgtgg tctacgagca cttccggccc tggggcgacc
     6481 agcacccgcc gctccagccc ttcctgcggc acgtcctgcg ccaccccaac ctcgtcggcg
     6541 ccatattcca ctcacaccac gcgctgcaaa gctacctgcg tctcggcatc gccgagtcgc
     6601 gtctgctggt agcgcacaat ggctgggacc cggcccggat ggaaccccgc ctgacccgtg
     6661 ccgccgcccg gagcgcgctg ggcctcgagc ccgggcgctt caccgtggtc tacagcggcc
     6721 ggatgaacca gcgcaaaggg ctcgatgtca tcctcgaatg cgcccgccag gcgcccgaat
     6781 tcgccttcgt cctggtcggc tccgagggcg aagggccggt ggaacgggag gcccgcactc
     6841 tgagcaacgt gcggatcgtt ccctggcagc gcttcaccga tctcgcaccc tggctctatg
     6901 ccgccgatgt gctggtgatt ccacccagcc tcgcgcccct cgaacggcac ggcaacaccg
     6961 tactcccgat caagctcttt ctctatctcg ccgccggccg ggtgatcctc gccccggtcg
     7021 cgccggatac cgccgagctg ctcgtcgatg gggagaacgc cgcgctggtg ccgccgggga
     7081 atgtggccgc catcgtgacc aggctacgga gcctggccgc cgattccgcc caagttgaac
     7141 gcctgtcgag cggcgcccgg acgacggcgg aggacctcac ctgggacgcc cgcgcagccc
     7201 acatcgccgg cttcatccgg gcccgtctcg acgccaaccc tgagccgcca aggcacgatc
     7261 cctggcgcct gggggcctgg ctggccgaag tgggacgctg gtcactgggc cgataggcgc
     7321 ggaacctgct caatcaccgc cgcttccgct aatgcggcac ggcagtacca ggcacacgtt
     7381 ttgtgctcaa gttgttgatt tataacgact tgagtgaaaa actttctgcg tcattgctac
     7441 acacccctct acgagagtgt gatgaaagca cacgccgcgc tggacagctt gacacgtctt
     7501 cgcagggcag aaggcgaaac tgtccgggcc attccgccca gttccgcacc tgctgaagct
     7561 gaactgaccc tgctctgccc cggtccggtg agtacctccg cgcgggtgaa gcgggcgctg
     7621 gccagtgccg acatcgccca ccgggatcgg gcgttcgtcg aggtgctgtc ccgtctggcc
     7681 ggccggctcc ggcggatcgc cgccgcgccg ggccacgatg tgctggtact gggtggcggc
     7741 gccaccgccg cgaccgaggc cgccctcgcg accttcgtcg gctccgacga gcggctgctg
     7801 gtggtgtcga acggcgcctt cggcgagcgc atcgccgaga tggctcagtg cctcggcatc
     7861 tcgatgagcc acctccgcta cgactggggc gagcccatcg tgctggagca gctccagggc
     7921 atgctcgacg gcgacccccg catccgggca gtcgccatgg tccaccacga gaccagtgtg
     7981 ggccggctca acccggtcaa cgaggtcggc cgcctcctcg ctccccgcca tctccgctac
     8041 ttcgtcgacg tggtctcgag cctcggcgcc gaagatttcg acatggtgaa gtcccgcgct
     8101 tcggtcgtta tcggcagctc caacaagtgc ctccacggcg tcgccggggc cgccttcgtg
     8161 atcgcccggc ccgagatctg gagcgagacc gagcatgtcc ggccccgctc gatgtacctc
     8221 g
//
LOCUS       DATIFF010001104         1452 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1219854, whole genome shotgun sequence.
ACCESSION   DATIFF010001104 DATIFF010000000
VERSION     DATIFF010001104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1452
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1219854"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            75..788
                     /locus_tag="VLD58_16155"
     CDS             75..788
                     /locus_tag="VLD58_16155"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HSB55897.1"
                     /translation="MTATLYLLDSVTSTQDRIQDLAMQGAPAGTAVMAAVQTAGRGRR
                     GRVWHAPRGGLWLSVLCRPASEPALEVLSLRVALATAQVVERHAANVSLKIKWPNDLI
                     LNGRKLGGILCEAHWQGDSAAWVAVGVGINLANPIPPELEDQAVTLNSYAPSLTPVML
                     AQDLVNGIVAASEINRRLSPREIQEFTDRDWLAGAELIEPARGTAGGITPEGLLKVIG
                     SNGVVELVRSGTVVLTGRG"
     gene            947..>1452
                     /locus_tag="VLD58_16160"
     CDS             947..>1452
                     /locus_tag="VLD58_16160"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: protein motif:HMM:TIGR00671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004594 - pantothenate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HSB55898.1"
                     /translation="MLLTLDVGNTEITIGLFAGDQLEGHWRLTTNPDRTPDEWGVALG
                     AFLLHAGHSPNAVRASVIASVAPAVTQSLAEGVRALTGGAVKVVDASSPLPIHLDVDE
                     PRTVGADRIINTLAAVDRFHADTIVVDFGTATTFDCITADGRFIGGVIMPGLRTSADQ
                     LTRRAAKLP"
BASE COUNT          228 a          498 c          485 g          241 t
ORIGIN      
        1 cctggtaccg gatcggcctc ggcgccctcc tcatctggct ggccacgcgc gggtcgctta
       61 ccctcggctg agtcatgacg gcgacgctct acctgctgga ttcggtgacc tcgacccagg
      121 accggatcca ggatctggcg atgcagggcg cccccgccgg caccgcggtc atggccgcgg
      181 tgcagaccgc cggccggggc cgacgggggc gggtgtggca tgccccgcgg ggcggccttt
      241 ggctcagtgt gctctgccgc ccggccagcg agccggccct cgaggtgctg agtctccggg
      301 tggcgctcgc tacggcgcag gtggtggaac gccatgcggc caatgtgtcg ctaaagatca
      361 agtggcccaa cgatctgatc ctcaatgggc gcaagctggg cggcatactc tgcgaggccc
      421 actggcaggg tgactcggcc gcctgggtgg cggtgggggt ggggatcaac ctcgccaacc
      481 cgatcccccc cgagctcgag gaccaggctg tgacattgaa cagctacgcc ccgtcgctga
      541 cacctgtgat gctggcgcag gacctggtca atgggatcgt ggccgcgagt gagatcaatc
      601 gccggctctc tccccgcgag atccaggaat tcaccgaccg ggactggctc gccggtgcgg
      661 agctgatcga accagcgcgc gggaccgcag gcggcatcac gcccgagggg ctcctcaagg
      721 tgattggaag caacggggtg gtggaactgg tgcggagcgg gacggtggtg ctgacggggc
      781 gcggttagct cggccgttag ccgttagcct ttagccatta ggtgtgtgtg gttcagtttt
      841 catgagaatt ccgccttgcc ttgccattca caacgatccc aggcaacctt gtccgcggct
      901 aacggccaac ggctaacggc taacggctaa cggccagaag gccaacatgc tcctcaccct
      961 cgacgtcggc aacaccgaaa tcaccatcgg tctcttcgcg ggagaccagc tcgaggggca
     1021 ttggcggctc accaccaatc ccgaccgcac gcccgacgaa tggggcgtgg ccctcggcgc
     1081 ctttctgctg catgccgggc attcgcccaa cgcggtccgc gccagcgtca tcgcctcggt
     1141 ggcgccggcg gtcacccaga gcctcgccga gggggtgcgc gcgctgaccg gtggagcggt
     1201 gaaggtggtt gacgccagct cgccgctgcc gattcatctc gatgtcgacg aaccccgcac
     1261 cgtcggcgct gaccggatca tcaacacgct cgccgcggtc gaccgctttc acgccgacac
     1321 catcgtggtc gatttcggca ccgccaccac cttcgactgc atcaccgccg acggccggtt
     1381 catcggcggt gtcatcatgc cggggctccg gacctccgcc gaccagctga cccgccgcgc
     1441 ggccaaattg cc
//
LOCUS       DATIFF010001105         1938 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1988181, whole genome shotgun sequence.
ACCESSION   DATIFF010001105 DATIFF010000000
VERSION     DATIFF010001105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1938)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1938)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1938
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1988181"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1521)
                     /locus_tag="VLD58_16165"
     CDS             complement(<1..1521)
                     /locus_tag="VLD58_16165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55899.1"
                     /translation="MTPVRRVLTLLLSTGSLLIRPLAGQARGPEPVLLELDLGRIAQR
                     TVSAYREGDRALIPFGAFCDLAEIRCSRRPDGRVEAILQPGNVPFVLDPASRTMRLGR
                     EKLELGPDQLFAAEGEVFLATTVLARVLNLEWAVSWPDLVAAVIEPENLPIARRIRRE
                     AFLQSRLAQSEGATVPGIQLGLERPRVDGVVFDYSLLTPTSSPVDGGAYSTALGLDVF
                     GGSFGAALASRDGAGRRPRADVSWTGIWRESPWLAQLRLGDGFSTGPRGRTLRGVSLS
                     NSPYVRPSTLGEIGFGGQLGPGWTVEAYRGGRLVGFDSVNALGQFSLDLPIQYGENPV
                     DFLAYGPFGEVREFNRTYRVRADGLPGRRFEYGLSAGECRTDRCSATGNLDLRYGVNT
                     RWTVRAGLEQFWRDSLGSLTHPYVGVLGAVGNAVSVEGEAVGNAVLRGVARYEPSVDV
                     QIQLEADRFARGLRDPILTPDGRQSQWTISAFLRPSSRLGGTYLEGSLDRIKARASD"
     gene            complement(1518..>1938)
                     /locus_tag="VLD58_16170"
     CDS             complement(1518..>1938)
                     /locus_tag="VLD58_16170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55900.1"
                     /translation="SVADSTRIQIGLSLELRTVIPLTYRKGTLHTGISVRSISTIPAG
                     DSMVVRARLERQGSSAYVGTARGALVSDAGTTIASFAEPIAVYYEAEPAFAIPTTGLA
                     PGRYRIRLELASERPDIAPELLLRAPPVRDSIEITLP"
BASE COUNT          307 a          667 c          695 g          269 t
ORIGIN      
        1 atcgcttgcg cgggccttga tccggtcgag gcttccctcg aggtacgtgc cacccaggcg
       61 gctcgagggc cggaggaagg cggagatcgt ccactggctc tgccggccat cgggggtgag
      121 gatcgggtcg cgcaggccgc gggcgaacct gtcggcctcg agctggatct ggacatccac
      181 cgagggctcg taccgggcca ccccgcggag gactgcgttc cccaccgcct cgccctccac
      241 ggacaccgcg ttgccgacgg cgccgagcac gccgacgtag gggtgcgtga ggctgccgag
      301 gctgtcgcgc cagaactgct cgagtcccgc ccgcacggtc cagcgggtgt tcactccgta
      361 acggagatcg agattgcccg tcgcgctgca ccggtcggtg cggcactcgc ccgcgctgag
      421 gccgtactcg aagcgccgcc ccggcagacc gtcggcgcgg acccgatagg tgcggttgaa
      481 ctcccggacc tcgccgaacg gcccgtaagc caagaaatcc acggggttct caccgtactg
      541 gatcggcagg tcgagggaga actgtcccag cgcattcacc gagtcgaacc cgaccagccg
      601 acctccgcgg taggcctcga ccgtccagcc cggaccgagt tgaccgccaa acccgatctc
      661 gcccagggtc gaggggcgga cgtaggggct gttggagagc gacaccccgc gaagggtgcg
      721 gcccctgggc ccggtgctga agccgtcgcc aagccgcagc tgcgccagcc acggactttc
      781 gcgccagatg ccggtccagg agacatcggc acggggccgg cgccccgcac cgtccctgct
      841 ggccagggcc gcaccgaatg agccgccgaa aacgtcgagg ccgagggcgg tggaataggc
      901 tccgccgtcg accggtgaag aggtaggggt gagcagggag tagtcgaaca cgaccccgtc
      961 cacccggggc cgctcgaggc ccagctggat tcccggcacg gtggcgccct cagactgggc
     1021 cagccgcgat tgcaggaacg cctcgcgtct gatccgtcgg gcgatgggca ggttctcagg
     1081 ctcgatgacg gccgccacga ggtccggcca gctcacggcc cactccaggt tcagaactct
     1141 ggccaggacc gtggttgcca ggaacacctc tccttcggcg gcgaagagct gatccggacc
     1201 gagctccagc ttctcgcggc ccagccgcat ggtgcgactg gcgggatcca ggacgaacgg
     1261 tacgttcccg ggctgaagga tggcctccac cctcccatcc ggccggcgac tgcaacgaat
     1321 ttcggccagg tcgcagaacg ccccgaaggg gatcagggcc cggtcacctt cgcggtaggc
     1381 cgagacggtc cgctgggcga tgcgtcccag gtcgagctcc agcagaaccg gctcggggcc
     1441 gcgtgcctgg cccgccagcg gccggatcag gagggacccg gtcgagagaa ggagcgtcag
     1501 cacccgccgt acgggcgtca cggcagagtg atctcgatcg aatcgcgcac cggtggtgcg
     1561 cggagcagga gctccggggc gatgtcgggc cgctcgctcg ccagctccag cctgatccgg
     1621 taacgcccgg gcgccaggcc ggttgtgggg atggcgaacg cgggttcggc ctcgtagtag
     1681 accgcgatcg gctcagcgaa gctggcgatg gttgtgccgg catcgcttac cagggcgccg
     1741 cgcgcggtgc cgacatatgc ggagctgccc tggcgttcca gccgcgcgcg gaccaccatg
     1801 gagtcgccgg cggggatggt gctgatgctc cgcacgctga tcccggtgtg cagcgtcccc
     1861 ttgcggtagg tcagcgggat gacggtccgc agctcgaggc tgagcccgat ctggatacgg
     1921 gtgctgtccg cgaccgac
//
LOCUS       DATIFF010001106         1309 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2295504, whole genome shotgun sequence.
ACCESSION   DATIFF010001106 DATIFF010000000
VERSION     DATIFF010001106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1309
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2295504"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1243)
                     /locus_tag="VLD58_16175"
     CDS             complement(<1..1243)
                     /locus_tag="VLD58_16175"
                     /inference="COORDINATES: protein motif:HMM:NF015662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HSB55901.1"
                     /translation="MTGFDSYRVGERARVARWIISAAFLLLLGAFFRTQVIQHEKFQL
                     KAETNRLRPIPLTAPRGAIYDYHGAIIAENVPGYSVKLLASSADSLRAVLARVREVVP
                     LDSGNVSEVLRRFQTARYQPVVVFGDASFETVSRLEEHRVALPGLVIQAEPKRLYPAG
                     KAVAHLVGYVGEVTDADLESDRYEGLSPGDIVGKAGLEQAYDDTLRGTEGVRYIEVNA
                     RGRLVREEASTASLPPTPGHPIETTIDLDLQRYIDSIWPPTVRGAMLALTPGGEIRAL
                     YSAPTYDPNAFIGGISPQLWRALNTDEARPLLDRAIQARYPPASPFKLAISAMALRRG
                     LITLDSHMPVPCRGGLRMGNRVFRCWKKEGHGSLDLIGAIAASCDVYFYQLGLKLGLD
                     AIIEDGVLMGFKDKAGVDLGNE"
BASE COUNT          197 a          444 c          475 g          193 t
ORIGIN      
        1 tctcgttgcc gaggtcgacc ccggccttgt ccttgaatcc catcagcacc ccgtcctcga
       61 tgatggcatc gagaccgagc ttgaggccga gctggtagaa gtagacgtcg cagctggccg
      121 cgatcgctcc gatcaggtcg agcgatccgt gtccttcctt cttccagcac cggaacaccc
      181 ggttgcccat ccggagcccg ccccggcagg gtacgggcat atggctgtcc agggtaatca
      241 gcccccgcct gagcgccatg gccgagatcg ccagcttgaa cggggatgcc ggtgggtagc
      301 gggcctggat ggcccggtcg aggaggggcc gggcctcgtc ggtgttgagg gcgcgccaga
      361 gctggggcga gatgccgccg atgaacgcgt tggggtcgta ggtcggggcg gagtagagag
      421 cgcggatctc gccgcccggc gtcagcgcaa gcatggcgcc gcggaccgtg ggcggccaga
      481 tgctgtctat gtaccgctgg aggtcgagat cgatggtcgt ctcgatcggg tggcctggcg
      541 tcgggggcag cgaggcggtg ctggcctcct cccgcaccag ccggccccgc gcgttcacct
      601 cgatgtaccg gacgccctcg gtgccccgga gcgtgtcgtc gtaggcctgc tccagcccgg
      661 ccttgccgac gatgtccccc gggctgagcc cctcatatcg gtcggactcc aggtccgcgt
      721 cggtgacctc gcccacgtag cccacgagat gggccacggc cttgcccgcc gggtagaggc
      781 gcttcggctc cgcctggatg acgagcccgg gcagcgccac ccggtgctcc tcgagccggg
      841 agacggtctc gaacgacgcg tcgccgaaga cgacgaccgg ctggtagcgg gcggtctgga
      901 accgccggag cacctcggag acgttgccgc tgtccagcgg caccacctcg cgcacgcgcg
      961 ccagcacggc gcggagcgaa tcagcggagg aggccagcag cttgaccgag tacccgggca
     1021 cgttctcggc gatgatggcg ccgtgatagt cgtagatcgc cccgcgcggc gcggtgagcg
     1081 ggatcggccg caggcggttg gtctccgcct tgagctggaa cttctcgtgc tggatgacct
     1141 gcgtccggaa gaaggcgccg agcagcagca ggaacgccgc ggagatgatc cagcgggcca
     1201 cccgggcgcg ctccccgacc cgatacgagt cgaacccggt cacgcgtcga gcctcacggc
     1261 gaaccactgg cggaaggcgt acagcacgaa ggcgcccgcg gcggccgtg
//
LOCUS       DATIFF010001107         1401 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1372524, whole genome shotgun sequence.
ACCESSION   DATIFF010001107 DATIFF010000000
VERSION     DATIFF010001107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1401)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1401)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1401
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1372524"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1390)
                     /locus_tag="VLD58_16180"
     CDS             complement(<1..1390)
                     /locus_tag="VLD58_16180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis decarboxylase"
                     /protein_id="HSB55902.1"
                     /translation="MRVTHPVRARLEIAEIADRCMKSPGGGPALLFEQVLLDDGTRSP
                     HPVAINLYGSMRRMCLALGVEDLDAVGGRISELLNLKVPEGLFGKLAMLPKLAEIGKF
                     PPKVRGGRAPCHEVVLRGDAVNLDQIPFLTTWPGDGGRYITLPMVITTDPIRGIRNVG
                     MYRVQVLGRNTLAMHWQRHKVGAAHWREMAARGERMPVAIALGGDPASIYSGSAPLPP
                     NIDEFLFAGFLRREPVELVRAVTCDLEVPAEAELVLEGYIDPGEPLVLEGPFGDHTGF
                     YSLADYYPRVHVTAVTARRDPIYPATLVGRPPMEDYYLGHATERIFLPLLKLTVPEIV
                     DYHMPAAGIFHNLVFVSIDKQYPGQAYKVMNALWGQGLMSLAKVLVVVDKQVDVRNPD
                     EAWWAALNNIDPERDVRFTMGPVDVLDHASRGFTYGSKMGIDGTRKWKEEGFGREWPD
                     VIEMDGETKRRVD"
BASE COUNT          215 a          504 c          460 g          222 t
ORIGIN      
        1 cgtccacccg ccgtttcgtc tccccgtcca tctcgatcac gtccggccat tcgcggccga
       61 acccttcttc cttccacttc cgggtgccgt cgatccccat cttgctgccg taggtgaagc
      121 cgcggctggc atggtccagc acgtccaccg gccccatggt gaaccggacg tcccgctcgg
      181 ggtcgatgtt gttgagtgcg gcccaccagg cctcgtccgg gttccggacg tccacctgct
      241 tgtccaccac gacgagcacc ttcgcgagcg acatcagccc ctggccccac agcgcgttca
      301 tcaccttgta ggcctgtccc ggatactgct tgtcgatcga cacgaacacc aggttgtgga
      361 agatcccggc cgccggcatg tggtagtcca cgatctccgg tacggtgagc ttgagcagcg
      421 gcaggaagat ccgctcggtg gcgtggccga ggtaatagtc ctccatcggc gggcgtccca
      481 ccagggtagc cggatagatc gggtcgcggc gggcggtcac cgcggtgaca tgcacccggg
      541 ggtagtaatc ggccagcgaa tagaagccgg tatgatcgcc gaacggcccc tcgagcacca
      601 gcggctcgcc ggggtcgatg tacccctcga ggaccagctc cgcctcggcc ggcacctcga
      661 ggtcgcaggt gaccgcgcgc accagctcca ccggctcccg acggagaaac ccggcgaaga
      721 ggaactcgtc gatgttgggc ggcagcgggg ccgagccgga gtagatgctg gccggatccc
      781 cgccgagggc gatggccacc ggcatccgct cgccccgggc cgccatctcg cgccagtgcg
      841 ccgcgccgac cttgtgccgc tgccagtgca tcgccagcgt gttccggccc aggacctgga
      901 cccggtacat ccccacgttc cggatccccc ggatggggtc ggtggtgatc accatcggca
      961 gggtgatgta gcggccgcca tcgccgggcc aggtggtgag gaacgggatc tggtcgaggt
     1021 tcaccgcgtc gccgcggagc accacctcat ggcagggcgc ccggccgccc cgcaccttgg
     1081 gcgggaactt gccgatctcg gcgagcttgg ggagcatcgc cagcttgcca aagagcccct
     1141 cgggcacctt caggttgagc agctcggaga tccgtccgcc gacggcgtcg agatcctcca
     1201 cgccgagcgc gaggcacatc cgccgcatcg agccgtacaa gttgatcgcg accgggtggg
     1261 gactccgggt cccgtcgtcc agcaacacct gctcgaacag tagcgccggc ccgcctcccg
     1321 ggctcttcat gcaccggtcg gcgatctcgg cgatctcgag ccgggcacgc accggatggg
     1381 tgacgcgcac cagctcgccg g
//
LOCUS       DATIFF010001108         1035 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2295834, whole genome shotgun sequence.
ACCESSION   DATIFF010001108 DATIFF010000000
VERSION     DATIFF010001108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2295834"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..484
                     /locus_tag="VLD58_16185"
     CDS             <1..484
                     /locus_tag="VLD58_16185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55903.1"
                     /translation="TFGMLVVGLVLSVAGILLVPFAVIVFALLLILAVLGGFLAIAHA
                     MGETLTRRQLARGAPIANANSYRYVTVGLGGVGALWLGWALFGWVPLAGSLVLGTAML
                     VTWLLATVGFGASLLSRAGLREHFAGRLLPAESLTDEYLWATPQFGVTAVKRPPKEKG
                     "
     gene            complement(530..>1035)
                     /locus_tag="VLD58_16190"
     CDS             complement(530..>1035)
                     /locus_tag="VLD58_16190"
                     /inference="COORDINATES: protein motif:HMM:NF042701.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SAM-dependent chlorinase/fluorinase"
                     /protein_id="HSB55904.1"
                     /translation="GHVFVGPDNGLFGGVIRGAEVQAVSLGVPSGASPTFHGRDLFAP
                     AAAALARGEPIGSLGEPYMAIPRRLIGSAPQYEGKVVIGEVIYVDRYGNLITNLTPDL
                     VPPYGILEAESLVIGPVRSTFGDVPAGGLLAYLGSGGTVEVAVRDGSAARRLGLGIGG
                     RVKVRLG"
BASE COUNT          143 a          363 c          354 g          175 t
ORIGIN      
        1 cacgttcggc atgctggtgg tggggctggt gttgagcgtg gcggggattc tgctcgtgcc
       61 cttcgcggtg atcgtctttg ccctgctgct gatcctggcg gtgctgggtg gattcctggc
      121 gatcgcccat gccatgggcg aaacgttgac gcggcggcag ctcgcccgcg gggctccgat
      181 cgcgaacgca aacagctacc gctacgtcac ggtcggcctc ggcggcgtgg gggctctctg
      241 gctcgggtgg gcgctgttcg gctgggtgcc gctggcgggc agcctggtgc tcggcaccgc
      301 gatgctggtc acctggctcc tcgccacggt cggattcggc gcgtcactgc tctcgcgggc
      361 ggggctccgg gaacatttcg ccggccggct cctgcccgcc gagtcgctca ccgacgagta
      421 cctctgggcc acgccacagt tcggggtcac tgcagtgaag cggccgccga aggaaaaggg
      481 atgaggagga ggcggggcct ctgctgctcc gctggctctg ctgcctcccc tatcccagcc
      541 tgaccttcac ccgtccccct atccccagcc ccagtcgtct cgccgccgaa ccatcccgca
      601 ccgccacctc caccgttcca cccgatccca ggtaggcgag aagccccccc gccgggacgt
      661 cgccgaacgt gctccggacc gggccgatca ccagcgattc ggcctcgagg atgccatagg
      721 gcggcacgag gtccggggtc aggttcgtga tcagattgcc ataacggtcc acgtagataa
      781 cttcgcctat cacgaccttg ccttcgtact gcggggcgct gccgatcagc cggcgcggaa
      841 tcgccatata gggctccccc agtgagccga tgggctcacc ccgagcgagg gccgccgcgg
      901 ccggcgcgaa caggtcgcgt ccgtggaagg tgggggatgc gcctgacgga acgccgagcg
      961 agaccgcctg gacctcggct ccccggatga cgccgccgaa gagcccgttg tctgggccga
     1021 cgaaaacgtg gccct
//
LOCUS       DATIFF010001109         2415 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2295889, whole genome shotgun sequence.
ACCESSION   DATIFF010001109 DATIFF010000000
VERSION     DATIFF010001109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2415
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2295889"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1972
                     /locus_tag="VLD58_16195"
     CDS             <1..1972
                     /locus_tag="VLD58_16195"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="chemotaxis protein CheA"
                     /protein_id="HSB55905.1"
                     /translation="ESTSQDGQNDFPELVGLLTRLQKGEAAPAAEPEAPAKPKKGRKS
                     GPAAVVAEAEPVPAPVAPAPEPVAAAPVPAPAAAGAEGPAAPSAPAASDSNIRVDVGL
                     LDKLMNLVGELVLARNQILQYSASLDDSAFVATSQRLNLITTELQEGVMKTRMQPIGN
                     VWSKFPRVVRDLALACKKQVRIDMEGKETELDRTIIEAIKDPLTHIVRNSVDHGMELP
                     EVRVAKGKPAEGRLLLRAYHEGGQVNIEISDDGGGVNTEKVKEKAIQKGIITAEQAGR
                     MADRELVNLIFAPGFSTADKVSNISGRGVGMDVVKTNIERIGGMVDVQSVYGQGTTLK
                     IKIPLTLAIIPALVVTTSGDRFAIPQVSLLELVRLEGEEARKQIEMVYGAPVCRLRGR
                     LLPLVSLAHSLGLQADFWGPNGRTGEAVNIVVLQADEHTFGLVVDEINDTEEIVVKPL
                     GKQVKGLNAYAGATIMGDGRVALILDVLGLAQRAQVVSEAKTRAAAERSAETRTAGSD
                     NRQMLLLFRLGADRRMAIPLSLVARLEEFKPEQVERAGEHQVVQYRNRLLPLLRLTDL
                     LGAAGAGADAETLQVVVYTHNGQDVGLLVENIVDIVEEDITVHRRQREGAVYGTAVIQ
                     EKVTDMLDVQALIEHGDVLLYAGAAETAGAGV"
     gene            1976..>2415
                     /locus_tag="VLD58_16200"
     CDS             1976..>2415
                     /locus_tag="VLD58_16200"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HSB55906.1"
                     /translation="MEMDRQFCTFVLGDLFFGIEVQKVQEVIRAQMMTRVPLAPRAIR
                     GLINLRGQIVTAIDLRERLGLPPAGNGREPMNVVVRTAEGAVSLLVDEIGDVLETDAA
                     QYEEPPETLPASAREMITGVYKLPERLLLVLDSEKTLNLEVAVAR"
BASE COUNT          426 a          800 c          863 g          326 t
ORIGIN      
        1 cgagagcacc agccaggacg ggcagaatga cttccccgag ctggtcggcc ttctcacccg
       61 gctccagaag ggcgaagccg ctcccgcggc cgagccggaa gcgcctgcca agccgaagaa
      121 gggccgcaag agcggaccgg cggccgtggt cgccgaggcc gagccggtcc cggcgccagt
      181 cgcgcccgct cccgagcctg tggccgcagc acccgtgccg gctcccgcgg ctgcgggcgc
      241 cgagggtccg gccgcgccga gcgcaccggc cgcgagcgac agcaacatcc gggtggatgt
      301 cggtctcctc gacaagctca tgaacctggt gggcgagctg gtcctggccc gcaaccagat
      361 tctccagtac tccgccagcc tggacgacag cgccttcgtc gctacgtcgc agcggctcaa
      421 cctgatcacc accgagctgc aggaaggggt catgaagacc cggatgcagc cgatcgggaa
      481 tgtgtggagc aagttccccc gggtggtgcg cgacctggcg ctggcctgca agaagcaggt
      541 gcggatcgac atggaaggga aggaaaccga gctcgaccgc accatcatcg aggcgatcaa
      601 ggacccgctc acccacatcg tccgcaactc ggtggaccac gggatggagc ttcccgaggt
      661 ccgggtggcg aaggggaagc cggccgaggg ccgcctcctg ctccgggcct accacgaggg
      721 cggccaggtc aacatcgaga tttccgatga tggcggcggg gtcaacaccg agaaggtgaa
      781 ggaaaaggcg atccagaagg ggatcatcac cgcggagcag gcgggccgga tggccgaccg
      841 cgagctggtg aacctgatct tcgcgcccgg cttctccacc gccgacaagg tcagcaacat
      901 ctccggccgc ggagtgggca tggacgtagt gaagaccaac atcgagcgga tcggcggcat
      961 ggtggacgtc cagagcgtct acggccaggg caccacgctc aagatcaaga tcccgctcac
     1021 cctcgccatc atccccgcgc tggtggtcac cacctcgggc gaccggttcg cgattccgca
     1081 ggtctcgctg ctcgagctgg tgcggctcga aggcgaggag gccaggaagc agatcgagat
     1141 ggtctacggg gcgccggtct gccggctccg cggccggctc ctcccgctcg tctccctggc
     1201 tcactcgctc ggcctccagg ccgacttctg ggggcccaac ggccggaccg gcgaggcggt
     1261 gaacatcgtg gtgctccagg cggacgagca caccttcggg ctggtggtcg acgagatcaa
     1321 cgacaccgag gaaatcgtgg tcaagccgct gggcaagcag gtgaagggac tcaacgccta
     1381 cgccggcgcc acgatcatgg gtgacgggcg ggtggcgctg attctcgacg tgctggggct
     1441 ggcgcagcgg gcccaggtgg tctccgaggc gaagacccgg gccgcggccg agcggagcgc
     1501 cgagacccgc acggcgggga gcgacaaccg ccagatgctg ctcctcttcc ggctgggcgc
     1561 cgaccgccgc atggcgatcc cgctctcgct ggtggcacgg ctcgaggagt tcaagcccga
     1621 gcaggtggaa cgggccggcg agcaccaggt ggtgcagtac cgcaaccggc tgctgccgct
     1681 cctccggctc accgacctgc tgggagcggc cggcgccggg gccgatgcgg agacgctgca
     1741 ggtggtggtc tacacccaca acggccagga cgtcggcctg ctggtggaga acatcgtgga
     1801 catcgtcgag gaggacatca ccgtgcaccg gcgccagcgc gaaggcgcgg tctacggcac
     1861 cgcggtgatt caggagaagg tgaccgacat gctggatgtg caggccctga tcgaacacgg
     1921 ggatgtcctg ctgtacgcgg gcgccgccga aaccgccggc gcgggagtct gagccatgga
     1981 aatggaccgc cagttctgca ccttcgtgct cggggacctc ttcttcggaa tcgaagtcca
     2041 gaaggtccag gaagtgatcc gggcccagat gatgacccgg gtgccgctgg ccccgcgggc
     2101 catccgcggc ctgatcaacc tccggggcca gattgtcacc gcgatcgatc tgcgcgagcg
     2161 actcggcctg ccgccggccg gcaatggccg cgagccgatg aacgtggtgg tgcgcaccgc
     2221 cgagggcgcg gtcagcctgc tggtggacga gatcggcgat gtgctggaga ccgacgcggc
     2281 ccagtacgag gaaccgcccg agaccctgcc ggcatcggcc cgtgagatga tcaccggggt
     2341 gtacaagctg ccggagcggc tgctcctggt gctggattcc gagaagaccc tgaacctcga
     2401 agtggccgtg gcccg
//
LOCUS       DATIFF010001110         1057 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_603455, whole genome shotgun sequence.
ACCESSION   DATIFF010001110 DATIFF010000000
VERSION     DATIFF010001110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_603455"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..261)
                     /locus_tag="VLD58_16205"
     CDS             complement(<1..261)
                     /locus_tag="VLD58_16205"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSB55907.1"
                     /translation="MTTLEILLADAAPGVRDALGKVGRLSEEALRARADEYDRLAAFP
                     KSSFEALFSAGLLGATIPVDAGGLGFGHHRGNTFPLWMMTKLI"
     gene            complement(258..>1057)
                     /locus_tag="VLD58_16210"
     CDS             complement(258..>1057)
                     /locus_tag="VLD58_16210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55908.1"
                     /translation="SPLCGDWLNADHTGTPGMLGVTLTEQEGSLWVRGLGMARPVGYA
                     WPRVRTASFAPDPVSQQAWGYLVDYDFGFMRTLIAGYYKTSVLVATTYNTFQDGSERT
                     PYWTREFFHRRTLAEPPTTAPPRGISRDRDRSQGTAPGRVDPDPMIGRWVNFDREGPD
                     ITGVTVRADGDRLAVSIDQAGRGGVRHWPVVPGIAMAERTSGGPAIGFLAMGDLFAES
                     GDGPHGGALCAYLNRGLLTIDTYVTDVRTSTNVMTRVHLHLAEGGTP"
BASE COUNT          161 a          373 c          371 g          152 t
ORIGIN      
        1 gatcagcttg gtcatcatcc acagcgggaa cgtgttgccg cggtgatgac cgaacccgag
       61 cccgccggca tcgaccggga tcgtggcacc cagcaggccc gcgctgaaca gggcctcgaa
      121 gctcgatttc gggaacgcgg cgagtcgatc gtactcgtcg gcccgggccc gcagggcttc
      181 ctcggacagc cggccgacct tgcccagcgc gtcgcgaacg ccgggggcag catcggcgag
      241 caggatctcc agcgtggtca tggcgtgcct ccctcggcca ggtgaaggtg gacgcgggtc
      301 atcacgttgg tcgatgtccg gacgtccgtg acatacgtgt cgatcgtgag cagcccgcgg
      361 ttgaggtacg cgcacagcgc gccgccgtgc gggccatcgc ccgactcggc gaacagatcg
      421 cccatggcga gaaagccaat cgccggcccg ccgctggtgc gctcggccat cgcgatcccc
      481 ggcaccaccg gccagtggcg aaccccgccg cgaccggcct ggtcgatcga gaccgcgagc
      541 cggtcgccgt ccgctcgcac ggtgaccccg gtgatgtccg gaccctcgcg gtcgaagttg
      601 acccagcggc cgatcatcgg gtccggatcg acgcgtccgg gcgccgtgcc ctggctgcga
      661 tcgcggtcgc ggctgatccc gcggggcggg gccgtcgtcg ggggctcggc gagcgtgcgg
      721 cggtggaaga actcgcgggt ccagtacggg gtccgctcgc tgccatcctg gaacgtgttg
      781 taggtcgtcg cgaccagcac gctggtcttg tagtagcccg cgatgagagt ccgcatgaac
      841 ccgaagtcgt aatcgaccag gtagccccag gcctgctgcg acaccggatc aggggcgaag
      901 ctcgccgtcc ggacacgagg ccaggcgtag ccgaccggcc tcgccatacc cagcccgcgc
      961 acccacaggc tgccctcctg ctcggtcaag gtcaccccga gcatgccggg ggtcccggtg
     1021 tggtccgcgt tcaaccagtc tccgcacagc ggggaga
//
LOCUS       DATIFF010001111         1913 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1372964, whole genome shotgun sequence.
ACCESSION   DATIFF010001111 DATIFF010000000
VERSION     DATIFF010001111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1913
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1372964"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..988
                     /gene="alr"
                     /locus_tag="VLD58_16215"
     CDS             <1..988
                     /gene="alr"
                     /locus_tag="VLD58_16215"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HSB55909.1"
                     /translation="VAQRSGARLLPMVKANGYGLGALEVARALEALDPWGFGVATVEE
                     GAQLRAGGITRPILVFTPLQPVLIARYQAHDLRPVICDGDGLHAWLEASRAPFHVEVD
                     TGMARAGFRWNGENDWRSLLGGAEGWEGIFTHFHSADTDPASVHRQWKRFQQLLDSLP
                     RRPALVHAANSAAALAGRTYAADLVRPGIFLYGGMAGAEVPEPVVQLRARVVGVRTVR
                     AGDTVSYGATWAAPRDAVIATVAAGYADGVHRSLSNAGAVELNGRVYPIVGRVTMDFL
                     MLAVEGPVALGDIATIYGGMVTLDDQARHAGTISYELLTSLGPRVVRRYDPS"
     gene            1002..1268
                     /locus_tag="VLD58_16220"
     CDS             1002..1268
                     /locus_tag="VLD58_16220"
                     /inference="COORDINATES: protein motif:HMM:NF020473.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1844 domain-containing protein"
                     /protein_id="HSB55910.1"
                     /translation="MNQHLASLVVGLAAQAEQAINGQLPGGVPAGVSAREVARSLIDT
                     LGMLEQKTRGNLEADEQKLLAEALTQLRFRFVSTEKQGPAGPVQ"
     gene            1265..>1913
                     /locus_tag="VLD58_16225"
     CDS             1265..>1913
                     /locus_tag="VLD58_16225"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF003766.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008973 - phosphopentomutase activity
                     [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA];
                     GO_process: GO:0043094 - cellular metabolic compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HSB55911.1"
                     /translation="MIPPVERRAALIVLDGMGIGPAPDTDQYGDSGSDTLGNVARAVG
                     GLRVPNLEQLGLGHCGSLLGVAPVASPTAAYGVALPKSAGKDSTTGHWELCGLNLDTP
                     FATYPEGFPADFLAALESATGRGTLGNRPASGTRILDELGAEHVATGKWIVYTSADSV
                     CQLAAHEDVVPVAELYRACEKARELLTGPTAVARVIARPFVGAPGSWKRTERRKDF"
BASE COUNT          270 a          663 c          683 g          297 t
ORIGIN      
        1 tgtggcccag cggtcgggcg cgcggctcct tccgatggtc aaagccaacg gatacggtct
       61 gggggccctc gaggtggcgc gggcgctgga agcgctcgac ccctggggtt tcggcgtggc
      121 caccgtcgaa gaaggcgccc agctccgtgc cggcggcatc acccggccca tcctggtttt
      181 cactccgctc cagcccgtcc tcattgcccg ctatcaggct cacgacctcc gtcccgtcat
      241 ctgcgacggc gatgggctcc atgcgtggct cgaggccagc cgcgcgccct tccacgtcga
      301 ggtggacacc gggatggcgc gggccggttt tcgctggaac ggcgagaatg actggcggtc
      361 gctgctcggt ggggccgagg ggtgggaggg aatattcacc catttccact cggccgacac
      421 cgaccccgcc tcggttcatc ggcagtggaa gcgcttccag cagctgctcg actcgctgcc
      481 acggaggccc gcgctggtcc acgcggccaa cagcgccgcg gccctcgccg gccggaccta
      541 cgcggccgat ctggtgcgtc cgggcatctt cctctacggc gggatggcgg gcgccgaggt
      601 gcccgagccg gtggtgcaac tccgggcgcg ggtggtcggc gtccgcaccg tccgtgcggg
      661 cgataccgtg agctacggcg ccacctgggc cgccccgcgc gacgcggtca tcgccaccgt
      721 ggccgctggc tatgctgatg gggttcaccg ttcgctgagc aatgccggag cggtggagct
      781 caacgggcgg gtgtatccga tcgtgggccg ggtgacgatg gacttcctga tgctcgcggt
      841 tgagggcccg gtggccctgg gcgacatcgc cacgatctac ggtggcatgg tgacgctcga
      901 cgatcaggcg cgccacgccg gcaccatctc ctatgaactc ctgaccagcc tcggaccgcg
      961 tgtggtccgg cgctacgacc cctcctgatt ccgaggagac gatgaatcag catctggcat
     1021 cgctggtggt gggcctcgcg gctcaggccg aacaggccat caacggtcag ctcccgggcg
     1081 gggtgcccgc cggcgtctcg gcccgcgaag tggcccgaag cctcatcgat accctgggca
     1141 tgctggagca gaagacccgg ggcaacctcg aggccgacga gcagaagctc ctcgccgaag
     1201 cgctgaccca gctccggttc cgcttcgtat cgaccgagaa gcagggaccg gccgggccgg
     1261 tgcagtgatt cccccggtgg agcgccgtgc ggcgctgatc gtgctcgacg ggatgggcat
     1321 cggcccggcc cccgataccg atcagtacgg cgacagcggg agcgatacct tgggcaacgt
     1381 ggcccgcgcg gtcggcgggc tccgggtccc caacctcgaa caactggggc tgggccactg
     1441 cgggtcgctg ctgggtgtcg cgccggtggc ctcacccact gccgcctacg gtgtggcgct
     1501 gccgaagagc gccgggaagg acagcaccac ggggcactgg gagctgtgcg ggctcaatct
     1561 cgacaccccg ttcgcgacct atcccgaggg ttttcctgcg gacttcctcg cggccctcga
     1621 gtcggctacc gggcgtggca cgctcgggaa ccggcccgcg tcggggaccc ggatcctcga
     1681 cgaactgggc gccgagcacg tcgccaccgg gaaatggatc gtctatacct cggccgacag
     1741 cgtctgccag ctcgcggcgc acgaggacgt ggtgcccgta gccgagctgt atcgcgcctg
     1801 tgagaaggcg cgggaactcc tgaccggtcc cacggcggtg gcgcgggtga ttgcccggcc
     1861 cttcgtcggg gctcccggca gctggaagcg gaccgagcgc cgcaaggact tca
//
LOCUS       DATIFF010001112         1214 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_757844, whole genome shotgun sequence.
ACCESSION   DATIFF010001112 DATIFF010000000
VERSION     DATIFF010001112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1214
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_757844"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..666
                     /locus_tag="VLD58_16230"
     CDS             <1..666
                     /locus_tag="VLD58_16230"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HSB55912.1"
                     /translation="REYILPDLDPGVRAGLDRTRATIERLGGVVREVSLPHTRFAVPC
                     YYIVAPAEAAANLARYDGVRYGQRRVGPEGDVRALYRATRGQGFGAEVRRRILTGTYV
                     LSSGYYDAYYRKAQQVRALLAEDFRRVFAQGVDFLLTPTTPTVAFKAGEKTEDPVAMY
                     LADIFTCSLNLAALPAMSLPVARSNGLPVGAQLVAPMFGEAAMLSVAAAIEAATDATL
                     EAR"
     gene            666..>1214
                     /locus_tag="VLD58_16235"
     CDS             666..>1214
                     /locus_tag="VLD58_16235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     GatCAB subunit B"
                     /protein_id="HSB55913.1"
                     /translation="MTWETVIGLEVHAQLLTRTKMFCGCENRFGAPPNTLVCPVCLGL
                     PGALPVPNEHAIRLATRAALALGCSVHEVSVFARKNYFYPDLPKGYQISQFDQPLATR
                     GGIAIESSERGPVTIGITRLHVEEDAGKSLHDRLPGKTAIDLNRAGAPLVEIVSEPDL
                     RSPAEARAYLTRLKQILLYCEVS"
BASE COUNT          183 a          427 c          419 g          185 t
ORIGIN      
        1 cgggagtaca tcctgccgga cctggacccc ggcgttcgtg ctggattgga ccggaccagg
       61 gcgaccatcg agcggctcgg cggcgtggtg cgcgaggttt ccctgccgca cacccggttc
      121 gccgtgccgt gctactacat cgtggctccc gccgaggcag ccgcgaacct ggcacggtac
      181 gacggggtgc gctacggcca gcgacgggtc gggccggagg gcgatgtgcg ggcgctctat
      241 agggcgaccc ggggccaggg gttcggggcc gaggtgcggc ggcgcatcct gacgggcacc
      301 tacgtgctct cgtccggcta ctacgacgcc tactaccgga aggcccagca ggtccgggca
      361 ctcctggcgg aggacttccg ccgggtgttc gcccaggggg tggatttcct gctcacgccc
      421 acgacaccga cggtcgcctt caaggcggga gagaagaccg aggacccggt ggcgatgtac
      481 ctggctgaca tcttcacctg ctcgctcaac ctggccgcct tgcccgccat gagcctcccg
      541 gtggcccggt cgaacggcct cccggtcggg gcgcagctgg tggcgccgat gttcggggag
      601 gccgcgatgc tgagcgtggc cgcggcgatc gaggcagcca cggacgccac cctggaggcg
      661 cgctgatgac ctgggaaacg gtgatcggcc tcgaggtgca cgcgcaactg ctcacccgca
      721 ccaagatgtt ctgtggctgc gagaaccggt tcggggcccc gcccaacacc ctggtgtgtc
      781 cggtctgcct tggcctcccc ggcgcgcttc cggtgccgaa cgagcacgcc atccggctgg
      841 ccactcgcgc ggccctggca ctggggtgca gcgtccacga ggtcagcgtc ttcgcccgca
      901 agaactactt ctatcccgac ctgcccaagg gataccagat ctcccagttc gaccagccgc
      961 tggccacccg gggcgggatc gcgatcgaat cgtccgaacg ggggccggtg acgatcggca
     1021 tcacccggct ccacgtcgag gaggacgccg gcaaatcgct gcacgatcgg ctgccgggca
     1081 agaccgccat cgacctcaac cgtgccggcg ccccgctggt ggaaatcgtc tccgaacccg
     1141 acctccggag tcctgccgag gcgcgggcgt atctcacccg actcaagcag atcctgcttt
     1201 actgcgaggt gagc
//
LOCUS       DATIFF010001113         1218 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1220744, whole genome shotgun sequence.
ACCESSION   DATIFF010001113 DATIFF010000000
VERSION     DATIFF010001113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1220744"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..931
                     /locus_tag="VLD58_16240"
     CDS             <1..931
                     /locus_tag="VLD58_16240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55914.1"
                     /translation="GRIAAASNTLHNQIHGDRVGFFGFFECENDQLIADALFDAAATW
                     LRARGFDTMRGPASFSVNDECGLLVQGFDTPPTLMMPHNPPYYASLLEGSGFAGTKNL
                     LVYQGGAMDHYIPVPERLARGTELIRQRQGITLRALDMKRFDADVAEIKRIYNEAWQK
                     NWGFVPMTEHEIDHLAEQFKPVVIPDIVPFAEKDGRVIGFGIVLPDLNEILQTNRSGR
                     LLPVLPKLLWRLQRRRFKRARILLLGILPEYQGKGVDAMLYHWIWTQCGEKLGITWGE
                     AGWILEDNAAMNAGLEKMTFRVYKTYRLYDRTL"
     gene            934..>1218
                     /locus_tag="VLD58_16245"
     CDS             934..>1218
                     /locus_tag="VLD58_16245"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSB55915.1"
                     /translation="MKALVTGATGFVGSHLAEALRRRGDDVTVLVRSPRKAEALAPLG
                     VRFVAGDLHDRDALARAAEGQDEVYHVAGVVAARSEAEFLRANRDGTANLV"
BASE COUNT          196 a          403 c          430 g          189 t
ORIGIN      
        1 cggccggatc gccgcggcgt ccaacaccct ccacaaccag atccacggcg accgggtcgg
       61 cttcttcggc ttttttgagt gcgaaaacga ccagctgatc gccgacgcgc tcttcgacgc
      121 cgcggcgacg tggctccgcg cccgcggctt cgacaccatg cgggggcccg cctccttctc
      181 ggtgaacgac gagtgcgggc ttctggtcca ggggttcgac accccgccga cgctgatgat
      241 gccgcacaat cccccctact acgcctctct gctcgagggg tccgggttcg ccggcaccaa
      301 gaacctgctg gtgtatcagg gcggggcgat ggatcactac atccccgtgc cggagcgcct
      361 cgcgcggggc accgagctga tccgccagcg ccaggggatc acccttcggg cgctcgacat
      421 gaagcggttc gacgccgacg tggccgagat caagcggatc tacaacgagg cctggcagaa
      481 gaactggggc ttcgtcccga tgacggagca cgagatcgac cacctggccg agcagttcaa
      541 gccggtagtg attcccgaca tcgtgccgtt cgcggagaag gacggacggg tgatcgggtt
      601 cgggatcgtc ctgcccgatc tcaacgagat cctccagacc aaccggtcgg gacggttgct
      661 ccccgtgctg ccgaagctgc tttggcggct gcagcgccgg cggttcaagc gggcccggat
      721 cctcctcctg ggcatccttc ccgaatacca ggggaagggt gtcgacgcga tgctgtacca
      781 ctggatctgg acccagtgcg gcgagaagct gggcatcacc tggggcgagg cgggctggat
      841 cctggaagac aacgcggcga tgaatgccgg gctggagaag atgaccttcc gggtctacaa
      901 gacctatcgc ctgtacgacc ggaccctgta gcgatgaagg cgctggtcac cggcgcgacg
      961 gggttcgtcg gcagccacct cgccgaggcc ctgcggcgcc ggggcgacga cgtcacggtg
     1021 ctggtgcggt cgccccggaa ggcggaggcg ctggccccgc tcggcgtccg cttcgtcgcc
     1081 ggcgacctgc acgatcggga cgcgctcgcg cgcgccgcgg agggtcagga cgaggtgtat
     1141 catgtggccg gggtggtggc ggcgcggagc gaggcggagt tcctccgcgc caaccgggac
     1201 gggacggcca acctggtg
//
LOCUS       DATIFF010001114         1180 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2142487, whole genome shotgun sequence.
ACCESSION   DATIFF010001114 DATIFF010000000
VERSION     DATIFF010001114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1180)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1180)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1180
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2142487"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            4..126
                     /locus_tag="VLD58_16250"
     CDS             4..126
                     /locus_tag="VLD58_16250"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HSB55916.1"
                     /translation="MKQTPQPSDEEIERAMAGNLCRCGTYSRIKAAIQLAAKGA"
     gene            128..>1180
                     /locus_tag="VLD58_16255"
     CDS             128..>1180
                     /locus_tag="VLD58_16255"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSB55917.1"
                     /translation="MSASLTRREFVGASGLALAVSVMPTRRLVREPPGKDAARALAPN
                     AFVEVGTDGVVSIWVSKSDMGQGVRTALCMIVADELDADWSRVRVVQADAHPRYGEMG
                     TGGSSSVASLWQPLRKAGAQAREMLVGAAADRWGVAASECQTRSGVVEHPASGGRFGY
                     GDLVNRAALRPVPENPRLKDPSEFRLIGTDAPGVDTRDKAMGKAQYGIDVVVPGMRYA
                     VIARCPVFGGTMKGHDPTKALAVPGVVAVVEVPSGAAVLATDTWAAMQGRKALECRWD
                     EGPAAQLDSGKISRQLHARAEMGGALARNDGDAPAVIAAAARSLEATYEAPLLAHATM
                     EPMNCVADVRPDRCEIW"
BASE COUNT          184 a          384 c          451 g          161 t
ORIGIN      
        1 ctgctgaagc agacgcccca gccgtcggat gaggagatcg agcgggccat ggccggaaac
       61 ctctgccggt gcggcaccta cagccggatc aaggcggcga ttcagcttgc cgcgaaaggg
      121 gcatgacatg agcgcctcat tgactcgacg ggagttcgtc ggagcgagcg ggctcgccct
      181 cgcggtgtcc gtcatgccca ccaggcgcct ggtccgggag cctccgggga aagacgcggc
      241 ccgggcactc gccccgaacg ccttcgtcga agtggggaca gacggtgtgg tgtccatctg
      301 ggtctccaag tcggacatgg gccagggggt ccggaccgcg ctctgcatga tcgtggcgga
      361 cgagctggac gccgactgga gcagggtccg cgtggttcag gccgacgccc acccgcgcta
      421 tggcgagatg gggaccgggg gctcgagcag tgtggcctcg ctctggcagc cgctccggaa
      481 ggccggggcc caggcgcggg agatgctggt gggcgccgcc gccgaccgct ggggagtcgc
      541 cgcctcggag tgccaaacgc ggagcggcgt ggtggaacat ccggcgagcg gaggccggtt
      601 cggctatggc gacctcgtga accgcgcggc tctccggccg gtgccggaga atccgcgcct
      661 caaggatccg tcggagttcc gcctgatcgg caccgatgcc ccgggggtag acacccggga
      721 caaggcgatg ggcaaggcgc agtacggcat cgatgtggtg gtgccgggga tgcgctatgc
      781 ggtaatcgcc cgctgccccg tgttcggtgg cacgatgaag ggccacgacc ccaccaaggc
      841 gctcgcggtg ccgggagtcg tcgcggtggt cgaagtaccg agcggtgccg ccgttctcgc
      901 gaccgacacc tgggcagcga tgcagggccg gaaggccctg gaatgccgct gggacgaggg
      961 accagccgcc cagctcgact cgggaaagat ttcccgccag ctgcatgccc gcgccgagat
     1021 ggggggtgcc cttgcccgga acgacggcga cgcaccggcc gtgatcgcgg cggcggcccg
     1081 gtcgctcgag gcgacctatg aggcgccgct gctcgctcac gcgacgatgg agcccatgaa
     1141 ctgcgtcgcc gacgtgcgcc ccgaccgatg cgagatctgg
//
LOCUS       DATIFF010001115         1416 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1220779, whole genome shotgun sequence.
ACCESSION   DATIFF010001115 DATIFF010000000
VERSION     DATIFF010001115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1220779"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..187
                     /locus_tag="VLD58_16260"
     CDS             <1..187
                     /locus_tag="VLD58_16260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="multidrug ABC transporter permease"
                     /protein_id="HSB55918.1"
                     /translation="NIDQLLEGRTSFVIAHRLSTVRDADLLLVLERGRLVEQGTHDDL
                     MRRQGLYYFLVSQQLEL"
     gene            193..1401
                     /locus_tag="VLD58_16265"
     CDS             193..1401
                     /locus_tag="VLD58_16265"
                     /inference="COORDINATES: protein motif:HMM:NF012739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HSB55919.1"
                     /translation="MPDSSAAFLDSEPPHWAARGLAWAIIGLFLLTLLASIIIQIPET
                     VSGRFSLAPRSGADPVRARKDGIVTGILVHEGDTVPAGATIALLRSPSLSDRFGDQRT
                     LQTQARADQERLRIASSQYDTRKRADEAEARRLRTRIESLTRLIGSKQRRLALTRELA
                     DSAQSGYRSGAVNRVESVRLDLEVTTLSEEVQNATSDLEDAQADLARLARDGQARDLE
                     YQEIRRSLLESVETARIRIDALGRDLSDLTEAGLAVTAPCRGVVLRLHVSAAGAVVRE
                     GDIISEIACAGERLQAEFPVAQAGLPLIRPGQPVKLRYDAFPYQRYGVRFGTVRWVGP
                     AGVSTSETGGFRVLVDLAEDSIRVRGQSRPLLAGMEGQADVVVGRRSLVSFAVEPVRA
                     IRENLREPPR"
BASE COUNT          207 a          491 c          497 g          221 t
ORIGIN      
        1 gaacatcgac cagttgctcg agggccgcac ctcgttcgtc attgctcacc ggctctccac
       61 cgtgcgcgat gccgacctgc ttctggtgct ggagaggggc cggctggtcg agcagggaac
      121 ccacgatgac ctcatgcggc gccagggact ctactacttc ctggtgagcc agcagctgga
      181 gctgtgagcg cgatgcccga ttcttccgcg gccttcctcg actctgagcc cccacactgg
      241 gccgcccggg gactcgcgtg ggccatcatc gggcttttcc tgttgaccct cctggcctcg
      301 atcatcatcc agatccccga gaccgtaagc ggccgattca gcctggcccc acggagcggt
      361 gccgacccgg tccgggcccg gaaggacggc atcgtcaccg ggatcctggt gcacgagggc
      421 gataccgtgc ccgccggtgc taccatagcg ctgctccgtt ccccctcgct cagcgatcgc
      481 ttcggcgacc agcgcacgct ccagacccag gcccgcgccg accaggagcg gctccggata
      541 gcgagcagcc agtacgacac caggaaacgc gccgatgagg ccgaggcccg ccggctgcga
      601 acccggatcg aatccctcac ccggctgatc ggatccaagc agcgccgcct ggcactgacc
      661 cgggagctgg ccgacagcgc ccagtcggga taccggagcg gggcggtgaa tcgggtggag
      721 tccgtccgcc tcgacctcga ggtgacgacc ctgagcgagg aggtccagaa cgccaccagt
      781 gatctggagg acgcccaggc cgaccttgcc cgccttgccc gggacggaca ggcccgcgac
      841 ctcgagtacc aggagattcg ccggagcctg ctcgagtcgg tcgagacggc ccgcatccgg
      901 atcgatgcgc tcgggcgcga cctgtcggac ctcaccgagg cggggctggc ggtgacggct
      961 ccctgccggg gggtggtgct gcggcttcac gtgagtgcgg ctggggcggt ggtgcgggag
     1021 ggcgatatca tcagcgagat cgcctgcgcc ggcgagcggc tgcaggccga gttccccgtg
     1081 gcccaggcgg ggctgccgct gatccggccc ggccagccgg taaagctccg gtatgacgct
     1141 ttcccctatc agcgttatgg ggtccggttc gggacggtgc gctgggtcgg gcccgcgggc
     1201 gtgtccacct ccgaaaccgg cggattccgg gtgctggtgg acctggccga ggattccatc
     1261 cgggtccgcg gccagagccg gcccctcctc gcgggcatgg aaggccaggc cgacgtggtg
     1321 gttgggcgcc gatctctggt gagcttcgcg gttgagccgg ttcgcgccat ccgggagaac
     1381 ctgcgggaac cgccccggtg agtcccttcg attcag
//
LOCUS       DATIFF010001116         1862 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1067110, whole genome shotgun sequence.
ACCESSION   DATIFF010001116 DATIFF010000000
VERSION     DATIFF010001116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1862
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1067110"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..961
                     /locus_tag="VLD58_16270"
     CDS             <1..961
                     /locus_tag="VLD58_16270"
                     /inference="COORDINATES: protein motif:HMM:NF018743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1343 domain-containing protein"
                     /protein_id="HSB55920.1"
                     /translation="AADPGESVASTTDSASGLPIYSLYGANRAPTDSMLAGVELILVD
                     LPDVGARYYTYLSTTIEVMRAAARRGLPVVVLDRPNPIGGAVQGNVLDPAHRSFVGAL
                     AMPMRHGLTLGELARLANLDLGLHADLRVVPVSGWRRDVTLLQNGLPFLPPSPNLRDP
                     ESLFHYPGICLFEATALSVGRGTEGAFRQIGAPWLDVPKVLGALAGSTPRGVRFEPVR
                     FTPHAPGDAKFPDVEVPGIRLVLTDARSYDPTLAAIALLLAVRRVHSDSLGLRPTGFD
                     RLAGGPALRQAIESGATAETIAASWRAPLAAWIAHRRPILLYR"
     gene            1164..1796
                     /locus_tag="VLD58_16275"
     CDS             1164..1796
                     /locus_tag="VLD58_16275"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HSB55921.1"
                     /translation="MKLVTKSLERGFFAVTNPITAWLLRSHIRPNTITTVAALLVVVS
                     AAAFAYGWIRWGGVLLLLSGVVDTLDGQVARGAGMVSKFGAFYDSTLDRVGDGATFIG
                     IAIYLLRAPGVGWRIETAALCMIAVLSSLLVSYARARAEGLGIECKVGLVQRAERLIA
                     IGVPSVLVGAGPKGEVLQVIVAVLALLSTVTVVQRFVYVYQVTKDGRTGS"
BASE COUNT          231 a          669 c          638 g          324 t
ORIGIN      
        1 cgcggccgat cccggcgagt cggtggcctc gaccaccgat tccgcctccg ggctaccaat
       61 ctacagcctc tatggggcca atcgggcgcc caccgattcg atgctggccg gggtcgagct
      121 catcctggtg gatcttcccg acgtcggggc ccggtactac acgtacctga gcaccacgat
      181 cgaggtgatg cgcgccgcgg cgcgccgcgg gctgcccgtc gtggtcctcg accgccccaa
      241 cccgatcggc ggagcggtgc aggggaacgt gctcgatccg gcccatcgct cgttcgtcgg
      301 cgcgctggcc atgccgatgc gtcacgggct gaccctgggt gagctggccc gactcgccaa
      361 cctggatctg ggcctccatg ccgacctgcg ggtcgttccc gtttcgggat ggcggcgcga
      421 cgtgaccctc ctgcagaacg gactcccctt cctgccgccg agtccgaacc tccgggatcc
      481 cgagagcctc ttccactatc ccggcatctg tctcttcgag gccacggccc tctcggtggg
      541 gcgggggacc gagggcgctt tccggcagat cggcgcgccc tggctcgacg tgcccaaggt
      601 gcttggcgcg ctcgcgggca gcacccctcg gggcgtccgc ttcgagccgg tgcggttcac
      661 tccccatgcc cccggcgacg ccaagtttcc cgacgtcgag gtgccgggca tccgcctcgt
      721 gctcaccgat gcccggagct atgaccccac cctcgccgcg atcgcgctcc tcctggcggt
      781 ccggcgcgtg cactccgaca gcctggggct ccggccgacc ggattcgacc gcctggcggg
      841 cggccccgcg ctgcggcagg ccatcgagtc cggcgcaacg gcggagacga tcgcggcctc
      901 ctggcgcgcg ccgctggcgg catggatcgc ccaccggcgc ccgatcctcc tgtatcgtta
      961 gtcatcgccc cgactcgcgg ggacgggtgg gtcaccgccc cccgcgagtt tccgtcccgt
     1021 cccggatacc ggcgaatgcg ggtttcgatt cgctgggctc ggcgcgattg ccgcgcgccc
     1081 ccggcgccgc tatcttaagc ggcccttaac tcattgcagc acatgatgct ccgctcccgg
     1141 atcgggtcgg agccgggagc cagatgaagc tggtcaccaa gtcgctcgag cggggctttt
     1201 ttgcggtcac caacccgatc acggcgtggc tgcttcgctc gcacatccgt cccaatacca
     1261 tcacgacggt cgcggcgctt ctggtggtgg tttcggcggc ggcgttcgcc tacgggtgga
     1321 tccggtgggg cggagtgctg ctcctgctgt cgggcgtcgt ggatactctc gacggccagg
     1381 tggcccgcgg cgcggggatg gtctcgaaat tcggggcctt ctacgactcg accctcgacc
     1441 gggtggggga tggcgcgacc ttcatcggga tcgccatcta cctccttcgt gcccccggcg
     1501 tcggctggcg catcgagact gcggcgctct gcatgatcgc ggtcctgagc tcgctcctcg
     1561 tctcctacgc gcgggcccgg gccgagggtc tggggatcga gtgcaaggtg ggcctcgtcc
     1621 agcgggcgga gcggctcatc gcgatcggcg tgccctcggt gctggtcggg gcgggaccga
     1681 agggagaagt cctgcaggtg atcgtggcgg tgctggcgct cctctccacg gtgacggtgg
     1741 ttcagcggtt cgtgtacgtg taccaggtga ccaaggacgg ccgcaccggc tcatgaccgg
     1801 tgcccggccc tgaccattcg cgaaaggacc tgaagtggcg aaaccctcga aggcccgcac
     1861 cc
//
LOCUS       DATIFF010001117         6322 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_758381, whole genome shotgun sequence.
ACCESSION   DATIFF010001117 DATIFF010000000
VERSION     DATIFF010001117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6322
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_758381"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1852
                     /locus_tag="VLD58_16280"
     CDS             <1..1852
                     /locus_tag="VLD58_16280"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HSB55922.1"
                     /translation="PEAGQPPMMQVFRSIAGKVAAAVFAVLMIVFLLTSVDWRQVTGG
                     SRTTVGSIEGVNIQLRTYQAIVQQAIESRQRESGRSLSAEEIEQARNDVWDQLIQQQA
                     LEKAYSERHLTVTSDEIASAIQTSPPPEVLSAPTFQTDGKFDPAKYQRWLRSAEAAQV
                     IPALEAQYRDEIRRSKLFRVVTADVYVSDPGLWQAWKDANEKVTIELVSIDPRRAVAD
                     SAVHLSDAEIRQYYDSHKDDFKRPETAYLSYVSLIRAADQSDTAAARDHILQLRKEIA
                     DGTPFEEVAKRESADTASGAKGGELGEFGKGAMDPAFEKAAYSLPIGAVSEPVLSAFG
                     FHLIKVESRTGGKVKARHILIPIEITGAHRDQLDARADSLESLGADKLDPAALDTAAR
                     ALGLRVGQALPLQKGGRVQVGLQVIPDAGVWAFQAKPGETGRIIEVSYAYFLFRLDSL
                     QAAGVPPFEQIKQSVAIAAAADHKRELAKAVAENVSKRLAEGSTLTQAATALGLPHSE
                     LGPFTRINPAIPNPIVVGAAFGIEEGKTSSAIQGEDGIYFLRVIKRTPADSAEYQKGI
                     DDFRARQIRLATQDRVRSYLAALKKSAKVTDRRAEIFRTEAQASTTNPQS"
     gene            complement(1962..2225)
                     /locus_tag="VLD58_16285"
     CDS             complement(1962..2225)
                     /locus_tag="VLD58_16285"
                     /inference="COORDINATES: protein motif:HMM:TIGR01411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HSB55923.1"
                     /translation="MLGNLGLPEILLIGFIVLMVFGAKRLPEIGASFGKGIREFKRSI
                     NDASDAVSGGQDNSANTSRQIDSRTSAPSTPSSSGGEPKRLSQ"
     gene            complement(2238..2510)
                     /locus_tag="VLD58_16290"
     CDS             complement(2238..2510)
                     /locus_tag="VLD58_16290"
                     /inference="COORDINATES: protein motif:HMM:NF025572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4321 domain-containing protein"
                     /protein_id="HSB55924.1"
                     /translation="MATGPRRPGFYLGVLVTGFILGGFLNALVSSVMPDSVAKQVFTF
                     TANGSIGPVSLDLLVFSLTLGPFAVHVSPLAILGVIIAYLIARSLF"
     gene            complement(2510..3499)
                     /locus_tag="VLD58_16295"
     CDS             complement(2510..3499)
                     /locus_tag="VLD58_16295"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HSB55925.1"
                     /translation="MTSPTAGVTLAALQASLGPRLEAVKGELRRIIESDFGLIAEVNG
                     HLLQMQGKMFRPTLLLLANEAAEAPDERVEILAAVVELIHLATLVHDDSVDHSVLRRG
                     MPTINALFSHQVSVIMGDYLYSRAVVELTRLGDIEPLKVLSRVTNDMTVGEMRQLMAH
                     EPLAFSESEYDLLIRAKTASLLSGACDLGALRATPRTRHALRGFGEALGMAFQIVDDL
                     LDYTGEETVTGKPSGNDLREHKVTLPLIFALPRLTPDARREVGALMATPEPSDQQIAR
                     VIGFVASAGGLEYARQRAHSLAEQAERELDALQPSAARETLRDSIAYVLDRRR"
     gene            complement(3496..6108)
                     /locus_tag="VLD58_16300"
     CDS             complement(3496..6108)
                     /locus_tag="VLD58_16300"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSB55926.1"
                     /translation="MNFEKLKETARKYEQKEEWRRAIEVYLQAIREFEAGNDPVPDLS
                     VYNRIGDLYLKANEPGPAVQAYERAADLYGEQGFYNNAIALCGKILRVNPGRIGTYLK
                     LAHLHARKNVVIEAKKNLLEYLERMNALNQLDDAFKSVKEFADQFPGNKEIRLMLSEL
                     LRASSRNAEAREQLEKLANDLEARGDTIGARKTLARLQALDAEEGAAPAAPEGGGPKP
                     PTPRAKGDLIFLDTGSEFAPPAPRAPSGPASRKTRAVIIPPPGRPTEKVKAPGGIPLI
                     EVGDEKARASGPKTGESPAIPAAPPAPLEIEHSSLVDAPIELESVQSISDEAHLEAAA
                     SAEVAKTLGFEPTVTEDFDASTVRPMEGLELDEPVPDSVELHISTEGLDLERASVDPA
                     DLEPGDRTSLIIPEPLESTPELADAFDHLTDGVSIGEPSGDIGGDLELLDTGAAEPEF
                     FNEPELDYPADTLPAIDETTEGGEVTFLEPSAPVQLTITELEDRVLDDPDDPEAHRAL
                     GEALLAAGEQLRGQEELELALAGYEGREDWPHASDLINELIRLDPNGVRYHQKRVEIG
                     FRSGDRSRLIDSYVELADALLRVGAMDKALAVYRRVSEHDPGNQRALAALDAFASPED
                     ELPPIPPPPPAAVQPPQALTQVAEEADHAVDAMFEAPAAPVGRAPAPAAPPADSKKRK
                     SVPAARIPEPAGDFIDLGALIMEDDKIKDTRMRVEDEEPTGDEQKDFNEMLTAFRRGI
                     DENIDAEDFQAHYDLGVAFKEMGLLDEAIAEFQKALRSPEGRLKTSEALGTAFFDKGQ
                     FAIAEAILKRAVESLGATDDEQIGLIYWLGRAQEAQGKTDASIANYQRVLAVDIGFQD
                     VTARMNRLASGRAQ"
BASE COUNT         1017 a         2120 c         2151 g         1034 t
ORIGIN      
        1 accagaggca ggacagcccc ctatgatgca ggtatttcgc agcatcgccg gcaaggttgc
       61 cgccgcggtg tttgccgtcc tcatgatcgt ctttctgctc accagcgtgg actggcgcca
      121 ggtgaccggc ggctcccgga ccacggtggg cagtatcgaa ggcgtaaaca tccagcttcg
      181 gacctaccag gccatcgtcc agcaggccat cgagagtcgg cagcgggagt ccggccgatc
      241 cctgtcggcg gaggagatcg agcaggcccg caacgacgtc tgggaccagc tgatccagca
      301 gcaggcgctg gaaaaggcct attcggaacg gcacctgacc gtcacctcgg acgaaatcgc
      361 gtcggcgatc cagaccagcc cgccgcccga ggtgctctcg gcccccacct tccagaccga
      421 cggcaagttc gacccggcca agtaccagcg ctggctccgc tccgcggaag ctgcccaggt
      481 cattccggcg ctggaggcgc agtatcgcga cgagatccgc cgcagcaagc tcttccgggt
      541 agtcaccgcc gacgtctacg tctccgaccc cggcctctgg caggcgtgga aggatgccaa
      601 cgagaaggtc accatcgagc tggtgtcgat cgacccccgc cgggcggtcg ccgacagcgc
      661 cgtgcacttg agcgacgcgg aaatccgcca gtactacgac agccacaagg acgatttcaa
      721 acggccggag acggcctatc tgagttacgt ctcgctgatc cgcgccgccg accagagcga
      781 tactgctgcc gcccgggacc acattctcca gctgcgcaag gaaatcgccg acggcacccc
      841 gttcgaggag gtggcgaagc gcgagtcggc cgacaccgcg tccggcgcca agggcggcga
      901 gctgggtgag ttcggcaagg gcgcgatgga cccggccttc gagaaggccg cgtactcgct
      961 tccgatcggg gccgtgagcg aaccggtgct ctccgccttc ggcttccacc tgatcaaggt
     1021 ggagtcccgc accggtggca aggtgaaggc ccgccacatc ctcattccga tcgagatcac
     1081 cggggcccac cgcgaccagc tcgatgcccg ggccgacagc ctcgagtccc tgggcgccga
     1141 caagctcgat cccgccgcgc tcgacaccgc ggccagggcg ctcggactgc gggtgggcca
     1201 ggcgctgccg cttcagaagg gcggcagggt gcaggtcggt ctccaggtca tccccgacgc
     1261 cggcgtctgg gccttccagg ccaagccggg cgagaccggc cggatcatcg aggtttccta
     1321 cgcctatttc ctgttccggc tcgacagcct tcaggccgcc ggtgttcccc cgttcgagca
     1381 gatcaagcag agcgtcgcga tcgccgcggc ggccgaccac aagcgcgagc tcgccaaggc
     1441 cgtggcggag aacgtctcca agcggctggc cgagggcagc actctgaccc aggctgcgac
     1501 cgcgctgggg ctgccacaca gcgagctcgg ccccttcacc cgaatcaatc ccgcgatccc
     1561 caacccgatc gtcgtcggcg ccgccttcgg catcgaggag gggaagacca gcagcgccat
     1621 tcagggcgag gacgggatct acttcctccg ggtgatcaag cggacccccg ccgactccgc
     1681 cgagtaccag aaggggattg atgatttccg cgcgcgccag atccggctcg cgacccagga
     1741 ccgggtgcgg agctatctcg cagcgctcaa gaagtccgcc aaggtgaccg atcgccgggc
     1801 cgagatcttc cggaccgagg cccaggcgag tacgacgaat ccgcagagct aggcggtcag
     1861 gcggcaaggc ggtcagagac aaacacaaaa ggctgggtcc ggtgaggacc cagcctgctt
     1921 gttttgcact ggccgccttg ccgcctgacc gccttgccgc cttactgcga cagccgcttc
     1981 ggctctccgc cgctgctgct cggggtgctc ggggcgctgg tccggctgtc gatctggcgc
     2041 gaggtgttgg cactgttgtc ctgcccgccg ctcacggcat cactcgcgtc gttgatgctg
     2101 cgcttgaact cccggatgcc ctttccgaag gaggcgccga tctccggcag gcgcttggcc
     2161 ccgaaaacca tcagcacgat gaacccgata agcaggatct cggggagacc caggttgcca
     2221 agcataacgc cccccagcta gaagagtgac cgcgcgatca ggtaggcgat gatgacgccc
     2281 aggatcgcca gcggcgaaac atgtaccgca aatggtccca gcgtaaggct gaacaccagc
     2341 agatcgagcg agaccggtcc gatgctgccg ttggctgtaa aggtaaacac ctgcttggcc
     2401 acgctgtccg gcatgaccga ggaaaccagg gcgttgagaa agccgcccag gatgaagccg
     2461 gtgaccagca caccgagata gaagccggga cgccgcggac cggttgccat cagcgccgcc
     2521 ggtccaggac gtaggcgatg ctgtcccgga gcgtctcccg ggccgcgctc ggctggagcg
     2581 cgtcgagctc ccgctccgcc tgctccgcca ggctgtgggc ccgctgccgg gcgtattcga
     2641 gaccgccggc gctggccacg aacccgatca cccgggcgat ctgctgatcg ctcggctcgg
     2701 gggtggccat cagggctccg acttcccgcc gggcgtcggg ggtaaggcgc ggcagggcga
     2761 aaatgagcgg cagcgtcacc ttgtgctcgc ggagatcgtt gcccgagggc ttcccggtca
     2821 cggtctcttc gccggtgtag tcgagcaggt catccacgat ctggaaggcc atgccgagcg
     2881 cttcgccaaa gccccgcagg gcgtggcggg tccgcggcgt ggcgcggagg gcgccaaggt
     2941 cgcaggcccc cgagaggagc gacgcggtct tggcccggat caggagatcg tactccgact
     3001 cggagaaggc gagcggctca tgcgccatca actggcgcat ctcgcccacc gtcatgtcgt
     3061 tggtgacccg ggagagcacc ttgagcggtt cgatgtcgcc caggcgggtc agctccacca
     3121 ccgcgcggga gtagagatag tctcccatga tcacggagac ctggtggctg aacagggcgt
     3181 tgatcgtcgg catgccccgc cggagcaccg agtgatcgac cgagtcgtca tgcaccaggg
     3241 tggcgagatg aatcagctcc accaccgccg cgagaatctc gacccgctca tcgggcgcct
     3301 cggccgcctc gttggcaagg agcagcagcg tggggcggaa catcttcccc tgcatctgga
     3361 gcaggtgccc gtttacctcg gcgatgagtc cgaaatcgct ctcgatgatc cggcgcagtt
     3421 cccccttcac ggcctcgagc cgcgggccca gcgaggcctg cagtgcggcg agggtcacac
     3481 cggcggtggg tgaggtcact gggcgcgtcc cgaggcgagt cggttcatgc gggcggtgac
     3541 atcctggaag ccgatgtcga cggcgagcac ccgctggtag ttcgcgatcg atgcgtcggt
     3601 cttcccctgt gcctcctggg cacggccgag ccagtagatc agaccgatct gctcgtcatc
     3661 ggtagctccg aggctctcga ccgcccgctt gaggatcgcc tcggcgatcg cgaattggcc
     3721 cttgtcgaag aacgccgtgc cgagcgcttc cgaggtcttg agccggccct cgggcgaacg
     3781 cagcgccttc tggaactcgg cgatcgcttc gtccagcagg cccatttcct tgaaggcgac
     3841 acccaggtcg taatgagcct ggaagtcttc ggcgtcaatg ttctcgtcga tgccccgccg
     3901 gaaggcggtc agcatctcgt tgaagtcctt ctgctcgtcc ccggtcggct cctcgtcctc
     3961 cacccgcatc cgggtgtcct tgatcttgtc gtcctccatg atcaaggcgc cgagatcgat
     4021 aaaatcgccg gccggctcgg ggatcctggc cgcaggcacc gacttccgct tcttgctgtc
     4081 ggccgggggc gccgccgggg ccggggcgcg gccgacgggg gccgccggcg cttcgaacat
     4141 cgcgtcgacc gcgtggtcgg cttcctccgc cacctgggtc agggcttgcg gcggctggac
     4201 cgcggccggg ggcggcggcg gaattggcgg cagttcgtcc tcgggcgagg cgaacgcatc
     4261 gagcgccgcg agggcccgct ggttgccggg atcgtgctcc gacacccggc gatagaccgc
     4321 cagagccttg tccatcgctc ccacccggag cagcgcgtcg gccagctcga catacgaatc
     4381 gatcagccgg gagcggtcgc cggaacggaa cccgatctcc acccgcttct ggtggtagcg
     4441 gacgccgttg ggatcgaggc ggatgagctc gttgatcagg tcacttgcgt ggggccagtc
     4501 ttcccgcccc tcatagccgg ccagcgccag ctccagctct tcctggcccc ggagctgctc
     4561 gcccgcggcg aggagcgcct cgcccagcgc ccggtgcgct tcgggatcat ccggatcatc
     4621 gagcacccgg tcttccagct cggtgatggt gagctggacc ggggccgagg gttcgaggaa
     4681 ggtgacctca ccgccctcgg tggtttcgtc gatcgccggc agcgtgtccg cgggatagtc
     4741 gagttcgggc tcgttgaaga actcgggctc ggcggcgccg gtatcgagga gctcgaggtc
     4801 cccgccgata tcgccggagg gctcgccgat gctgaccccg tccgtcagat gatcgaaggc
     4861 gtcggccagt tcgggggtac tctcgagcgg ctccgggatg atgaggctgg tacggtcccc
     4921 gggctcgaga tcggccggat cgacactggc gcgctcgagg tcgagaccct cggtcgagat
     4981 gtggagctcc acgctgtccg gcaccggctc atccagctcc agcccctcca tggggcgcac
     5041 cgtgctggca tcgaagtctt ccgtcacggt gggctcgaag cccagcgtct tggcaacctc
     5101 ggccgaggcg gccgcctcga ggtgggcctc gtcggaaatc gactggaccg actcgagttc
     5161 gatcggcgca tccaccaggc tcgagtgctc gatctcgagc ggagccggcg gcgccgccgg
     5221 aatggccggg ctctcaccgg tcttggggcc cgaggcgcgg gccttttcgt cgcccacctc
     5281 gatgaggggg atgccgcccg gcgccttcac cttttcggtg gggcggcccg ggggaggaat
     5341 gatgacggcg cgggtctttc gcgaggccgg acccgacggc gcgcggggcg cgggcggggc
     5401 aaactcggaa ccggtatcga gaaagatgag atcgcccttg gcgcggggag tgggcggctt
     5461 gggccccccg ccttcggggg cggccggagc ggccccctcc tcggcatcga gcgcctgaag
     5521 ccgcgccagg gtcttcctcg cgccgatggt atcgccccgg gcctcgaggt cgttcgccag
     5581 cttctcgagc tgttcccggg cctcggcatt gcgcgaggag gcgcggagca gctcgctcag
     5641 catcaggcga atttccttgt tgccgggaaa ctggtcggca aattccttca ccgacttgaa
     5701 ggcatcatcc agctggttca gggcgttcat ccgctcgaga tactcgagca ggttcttctt
     5761 ggcttcgatg acgacgttct tgcgggcgtg caggtgggcc agcttgaggt acgtgccgat
     5821 ccgccccgga ttgacccgga ggatcttccc gcacagtgcg atagcgttgt tgtagaagcc
     5881 ctgctcgccg tagagatcgg cggctcgttc gtaggcctgc accgcggggc cgggttcgtt
     5941 ggccttgagg tacaggtcac caatccggtt gtacaccgag agatcgggga ccggatcgtt
     6001 cccggcctcg aactctcgga ttgcctggag atagacctcg atggcccggc gccactcctc
     6061 cttctgctcg tacttccggg ccgtttcctt cagcttctcg aagttcatcc agccggcagg
     6121 tgggagggtg gaggcctatg aaacaccgga acttagaaga tacgggacag ggaggctaag
     6181 cggcaaggcg gcaacaaggt cgggggtcgt gctccggctc gatttggtgg tccagccggg
     6241 cagcctggag gaagtcggcc tgctggccga ggccaccggg gccgagcccg gcgcgatggc
     6301 ccgtcagtac gttccacggt cc
//
LOCUS       DATIFF010001118         1097 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_449631, whole genome shotgun sequence.
ACCESSION   DATIFF010001118 DATIFF010000000
VERSION     DATIFF010001118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_449631"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1015)
                     /locus_tag="VLD58_16305"
     CDS             complement(<1..1015)
                     /locus_tag="VLD58_16305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55927.1"
                     /translation="MTASIRTDRRGIALALALFAMVISTLLITAVFYIARIEQRMGNN
                     RIATTQAREAAEAGLSTVLANWSTSAYNTMANGAVLTIPQTTIGGGASYSGSLRRMTP
                     TTFLIQVEGAYRVGGQILTRRQLARIVRLNQPAINMRAAVTTRVGISVSGSSQVSGVD
                     SIPAGWGGSCPAPGATQPGIRDSSGNVTTSGACSGASCITGNPRIQTDPSVNSGTFNQ
                     FGDVGFSDLAALADKTISGTINGIGPTINTGPPVSCRIGDLTNWGDPLNPAGACGSYF
                     PIIYAPGDVRLSGGWGQGILLVAGDLEIAGGVEFYGPVIVQGRIRSTGTGGHIFGGLM
                     AANA"
BASE COUNT          162 a          362 c          394 g          179 t
ORIGIN      
        1 cggcgttggc cgccatgagg ccgccgaaga tgtgcccgcc ggtgccggtg ctgcggatgc
       61 gcccctgcac gatgaccggt ccatagaact ccaccccgcc cgcgatctcc aggtcgcctg
      121 cgaccagcag gatcccctgg ccccacccgc cggagagtcg cacgtcaccc ggagcgtaaa
      181 tgatggggaa gtagctgccg caggccccgg ccggattgag cgggtcgccc cagttggtca
      241 ggtcgccgat gcggcacgag accggaggcc cggtgttgat cgtcggcccg atgccgttga
      301 tggtgccgct gatggtcttg tcggccaggg ccgccaggtc cgaaaagccc acatcgccaa
      361 actgattgaa cgtcccgctg ttcacgctcg ggtccgtctg aatccggggg ttgccggtga
      421 tacagctggc gccgctgcag gcgccggacg tggtcacgtt gccgctcgag tcgcgaatgc
      481 cgggttgcgt ggcccccggg gcggggcagc tgccgcccca ccccgcaggg atggaatcaa
      541 cgccactcac ctgcgacgac ccgctcacgc tgatgcccac gcgggtggtg accgccgcgc
      601 gcatgttgat ggcgggctgg ttcagccgga cgatccgcgc gagctggcgg cgggtgagga
      661 tctgcccgcc gacccggtag gctccctcga cctggatgag gaaggtggtc ggcgtcatcc
      721 ggcggagcga cccgctgtag ctcgcgccac cgccgatcgt cgtttgtggg atggtcagca
      781 cggcgccatt cgccatggtg ttgtaggccg acgtgctcca gttggccagc acggtcgaga
      841 ggcccgcctc ggcggcctcc cgcgcctggg tggtcgcgat acggttgttc cccatgcgct
      901 gctcgatccg ggcgatgtag aacaccgcgg tgatcagcag ggtggagatc accatggcaa
      961 agagtgccag cgccagggcg atcccacgac ggtcggtgcg gatggatgcg gtcacggaat
     1021 cctcgttggg ctatggcagc ggcgcattcc gcagcgtgac ggtcgtactg aggctgtcct
     1081 ggagcggctg gacgacg
//
LOCUS       DATIFF010001119         5079 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1680868, whole genome shotgun sequence.
ACCESSION   DATIFF010001119 DATIFF010000000
VERSION     DATIFF010001119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5079
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1680868"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1005)
                     /locus_tag="VLD58_16310"
     CDS             complement(<1..1005)
                     /locus_tag="VLD58_16310"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HSB55928.1"
                     /translation="MSPPAQRSRQSLDHAIVRGVAWTGAASWVAQILTWVSTLLVVRI
                     LHPDDYGIVALAALYLGLATMLSEFGIGTAVITMRDLPSRQIAQLNSVALLVALGALL
                     LAWLLAVPMAQVLGSPRLVTLIRVMSVGLVVAALGSVPTALLQKSLRFRFLAAAQIAQ
                     SLTGAAASLLLATFGAGYWALALGPLLGQVVMSVMAVIGAPCGYVWPDRRQLKPALQF
                     SRTVILERFCWYLYTGSDRFIIGKLIGEAAVGLYSVAASFGMMAVEKVAVLVLRVAPA
                     AFAEVQRDPAALRRYLLSMTEGLSIVTFPISIGIALVAGDTVHLLFGEHWAGAIAPLR
                     I"
     gene            complement(1262..2587)
                     /locus_tag="VLD58_16315"
     CDS             complement(1262..2587)
                     /locus_tag="VLD58_16315"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HSB55929.1"
                     /translation="MIYLPARRWYLVAALLAPLALVGFWWPTVGTVLVALDLLWILAA
                     LVDGFRLAGVDPAAVTIVREPPPAFSVGRTLSVTYRWSHPFRRRLVVWVKELFPPALE
                     PAGEGERQLTIDPGMTRREDIDVRPRHRGKGTGGRLYLRLLSPWGLVWRQVRRDLPWQ
                     ATVYPNLVGASLRSLPTQSQRRREAGFRNVRRLGEGRLFESLKEWVPGEDTRNIDWKA
                     TARRGKVMARQYEDERRQQVLIVIDAGRMLTAEVDGRARLESVVEAALHLAHSAEEHD
                     DNIGLMVFADEVQQFIPPARGRRALRAVLDALASIEGKLVEPNYPAAFAFLAARNRKR
                     ALTVLFTDVIDRTASEALVAQVGTLRPRHLPLAVALRDPSLERLATVRPHTTGEAYER
                     AAAEELLQSREDALAEMRARGILVLDVPPAGASKAVVDQYNTLKRRGAL"
     gene            complement(2598..3515)
                     /locus_tag="VLD58_16320"
     CDS             complement(2598..3515)
                     /locus_tag="VLD58_16320"
                     /inference="COORDINATES: protein motif:HMM:NF040105.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HSB55930.1"
                     /translation="MVEQLGRVILGQEAVLRETVLALMARGHVLFEGAPGTAKTLLVR
                     TLSQALGLTFRRIQFTPDLMPSDITGVNLLTPQGEFSFRPGPLFGDLVLGDEINRAPA
                     KTQAALLEAMQERHVTVDGTSHPLSASFTVFATQNPIEFEGTYPLPEAELDRFLVKSL
                     LGYPDEASERGVLTRVLEGFEAAEPASYGVNQVLDAEGLAGLRAATRRVRVEPSLVGY
                     IASLVRATRDAPALTLGASPRASVALLKLAQAAALLDAREYVIPDDVKLLAPPVLRHR
                     IAVAPELELEGVTPDQALRTILERIEAPR"
     gene            complement(3557..4756)
                     /locus_tag="VLD58_16325"
     CDS             complement(3557..4756)
                     /locus_tag="VLD58_16325"
                     /inference="COORDINATES: protein motif:HMM:NF025617.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4350 domain-containing protein"
                     /protein_id="HSB55931.1"
                     /translation="MRPRTEAALALGSLALLGILAGALERRGNRPEQLDPRASSYLAG
                     PLGARGLADALGRLKLRVEHYRRGTRQLGALSDSAPTVMAVVDPLIPYSASETRQLLE
                     WHESARGGDLLLAGEGSAGVMRCFGYQPDPRPDSTRVRETGLWPAVGAVLAASESVVV
                     DSSRIADTGIWTCTVPPYRRVDTLLTSSTGRTLALRLVRSDVDREVLLLSDATLLRNR
                     SLRETDAGPWALRLFLGKYERVIFDEAHQGFGAGGSLADATLEWSLRSPLGWAAWQLA
                     IVGTLMLLAGAIRFGPIRSVISRKRRSPLEHVRALATALAAARGHDVAIGAVVQGLRR
                     RLQPAGQRGRSDWRDWVERLSHNVRSPRAVEAAGKLQSLTRPGQPPEGVLQAANAVED
                     VWEELRP"
     gene            complement(4740..>5079)
                     /locus_tag="VLD58_16330"
     CDS             complement(4740..>5079)
                     /locus_tag="VLD58_16330"
                     /inference="COORDINATES: protein motif:HMM:NF024948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4129 domain-containing protein"
                     /protein_id="HSB55932.1"
                     /translation="HDAPSTPELRGASWYRQQARRLAAEGRYVEAMQADFLGLVLELD
                     QLGVLQFHPSKTPYEYSAEVKGGAPVRAALRELAGSLYHYAFAREPCGQDDFVRWQER
                     SRSERYAASH"
BASE COUNT          819 a         1833 c         1736 g          691 t
ORIGIN      
        1 gatcctgagt ggcgcgatcg cgccggccca gtgctcgccg aagagcaggt gcaccgtgtc
       61 acccgccacc agcgcgatgc cgatcgaaat cgggaaggtg acgatcgaca gcccttcggt
      121 catcgagagg aggtaccgcc ggagggcggc cgggtcgcgc tgcacttcgg caaaggcggc
      181 cggcgccacc cggagcacca gcaccgcgac cttctccacc gccatcatgc cgaagctggc
      241 ggccaccgag tagaggccga ccgcggcctc gccgatcagc ttgccgatga tgaaacggtc
      301 cgaaccggtg tagaggtacc agcagaaccg ctccaggatc accgtgcggc tgaactggag
      361 cgccggcttg agctgccgcc ggtcgggcca gacgtagccg cacggcgcgc cgatcaccgc
      421 catcacgctc atgaccacct ggccgaggag cggacccagg gcgagggccc agtagccggc
      481 cccaaaggtg gcgagaagga ggctggccgc ggcgccggtg agcgattgcg cgatctgggc
      541 cgcggcgaga aagcggaaac gaagtgattt ctgcagtagg gcggtgggca cgctgccgag
      601 cgcggccacc accaggccca cgctcattac ccggatcagg gtgaccagcc ggggtgagcc
      661 cagcacctgc gccatcggca ccgccagcag ccaggccagc agaagggccc ccagcgccac
      721 cagcagcgcg acgctgttga gctgggcgat ctggcggctc ggcaggtcgc gcatcgtgat
      781 gactgcggta ccgatcccga actcgctcag catcgtggca aggcccagat agagcgctgc
      841 cagggccacg atgccgtagt catccgggtg gaggatccgg accaccagca gcgtggaaac
      901 ccaggtgagg atctgggcga cccaactcgc ggcaccagtc cacgcaacgc cccggacgat
      961 cgcgtggtcg agagactgcc tggaacgctg cgctggtggg gacaaaatgg ctccgggtct
     1021 gcggcgggcg aagatcggcc aaaccggcct cgcctttggc aatattgacg ccgttcggtc
     1081 ctgcgacggt acagcctcgg gatgtctggt cgggaattgc cctagtgtag cgcgatgtcc
     1141 ccaaatgtgc agcatccacc agcccgaaac gcgccagaag tcatacgcct gcacctgcgg
     1201 ggggtatcgt aatccggtca cccatgccga caggggcgtg aggtgaagct gacgggagcg
     1261 gctacagggc cccccggcgt ttcaacgtgt tgtactggtc gaccacggcc ttgctggccc
     1321 cggccggcgg cacgtcgagg accaggatac cccgggcccg catctcggcc agcgcatctt
     1381 cccgcgattg cagcagttcc tcggcggcgg cccgctcgta ggcttcgccg gtggtatgcg
     1441 gccgtaccgt ggccagccgc tcgagcgatg gatcgcggag cgccaccgcc aacggcaggt
     1501 gcctgggacg gagagttcct acctgcgcaa ccagcgcctc gctcgccgtc cgatcgatga
     1561 cgtcggtgaa caggaccgtc agtgcccgtt tccggttccg cgccgccagg aacgcgaacg
     1621 ccgcgggata gttcggctcg accagtttcc cttcgatcga ggccagcgca tcgagcaccg
     1681 cccggagggc ccgccgcccg cgggccggag gaatgaactg ctgcacctcg tcggcgaaca
     1741 ccatgagccc gatgttgtcg tcgtgctctt cggcgctgtg cgccaggtgc agcgccgcct
     1801 ccaccaccga ctcgagacgc gcccttccgt ccacctcggc cgtgagcatc cggccagcgt
     1861 cgatcacgat cagcacctgc tgccgccgct cgtcctcgta ctgccgggcc atcactttgc
     1921 cccgtcgggc ggtggccttc cagtcgatgt tgcgggtatc ctcgcccgga acccactcct
     1981 tgaggctctc gaacaggcgc ccttcgccca ggcggcggac gttgcggaac ccggcttcac
     2041 ggcggcgctg gctctgggtc ggcagtgaac gcagcgacgc ccccaccagg ttgggataga
     2101 ccgtggcctg ccacggcagg tcccgccgga cctggcgcca taccagcccc caagggctca
     2161 ggagcctgag atagagcctg cctccggtgc ccttgccgcg gtggcgtggt cggacatcaa
     2221 tgtcttcccg ccgcgtcatc ccggggtcaa tcgtgagctg acgctcgccc tcacccgccg
     2281 gctcgagcgc cgggggaaag agttccttga cccagaccac cagccgccgc cggaacggat
     2341 ggctccagcg gtaggtcacc gacagagtgc ggcccaccga aaacgccggt ggcggttccc
     2401 gcacgatggt gaccgcggcg gggtcgactc cggcaagccg gaatccgtcg accagagccg
     2461 ccaggatcca gagcaggtcg agcgccacca gcaccgtgcc caccgtgggc caccagaagc
     2521 ccaccagcgc cagcggtgcc agcagagcgg cgaccaggta ccagcgccgc gcagggaggt
     2581 agatcacccg gccaccatca ccgcggcgcc tcgatccgtt cgaggatggt gcggagcgcc
     2641 tggtccggcg tgaccccttc cagctcgagc tccggcgcaa ccgcgatccg gtgccgcagc
     2701 accggcggcg ccagcagctt cacgtcatcg ggaatcacgt actcccgggc atcgagcagg
     2761 gccgcggcct gcgccagctt gaggagcgcc acactggctc ggggagaggc gcccagggtg
     2821 agcgcgggcg cgtcgcgggt ggcccgcacc agcgaggcga tgtacccgac caggctgggc
     2881 tccacccgta cccgccgggt tgccgcgcgc agcccggcga gcccctccgc gtcgagcacc
     2941 tggttcacgc cgtagctcgc cggctccgcc gcttcgaagc cctcgagcac ccgggtgagc
     3001 acgccccgct ccgaggcttc atcggggtat cccagcaggc tcttcaccag gaaccggtcg
     3061 agctcggcct cgggcagcgg ataggtaccc tcgaactcga tcgggttctg agtggcaaag
     3121 accgtgaagc tggcggacag cggatggctg gtgccgtcga ccgtaacgtg ccgctcctgc
     3181 atcgcctcga gcagcgccgc ctgggtcttg gcgggggcgc ggttgatctc gtcgcccagc
     3241 accaggtcgc cgaagagtgg gccggggcgg aagctgaatt ccccctgcgg cgtcagcagg
     3301 ttcacgccgg tgatgtcact gggcatgaga tcgggggtga actggatccg ccggaaggtg
     3361 agccccagcg cctggctcag ggtccggacc aggagcgtct tggcggtacc gggcgcgccc
     3421 tcgaagagca catgtccccg ggccatcagc gcgagcaccg tttcgcggag cacggcctcc
     3481 tggcccagga tcacccggcc cagctgttcc accactccgc gcgcggactc cgcgtgtcgg
     3541 cgagcctcgt ccggcgtcag gggcgtagtt cctcccacac atcctccaca gcgttggcgg
     3601 cctgcagcac gccttccggc ggctgaccgg gccgagtcag tgattgaagc ttcccggcgg
     3661 cctcgacggc ccgcgggctc cggacattgt gtgacagacg ctcgacccag tcgcgccagt
     3721 cagaacggcc ccgctgcccg gcgggctgga gccgccgccg gagcccctgc accaccgccc
     3781 cgatcgcgac gtcatgcccc cgggccgccg ccagcgcggt cgccagcgcc cgcacgtgtt
     3841 cgagcgggga gcgccgcttg cgggaaatga ccgaccggat cggtccgaac cgtatcgccc
     3901 cggcgagcag catgagggtg ccgacgatgg cgagctgcca cgcggcccac ccgagcgggg
     3961 aacgcagact ccattcgagc gtcgcgtcgg ccagcgagcc cccggccccg aagccctggt
     4021 gcgcctcgtc gaagatcacc cgctcatact tccccaggaa cagccgcagg gcccagggac
     4081 cggcatcggt ctcccgcagg gagcgattgc ggagaagcgt ggcgtcggac agcagcagca
     4141 cctcccggtc cacatcgctc cgcaccagcc ggagcgccag ggtgcgcccc gtgctactgg
     4201 tcaggagcgt atcgactcgg cggtagggcg gtacggtgca ggtccagatc ccggtgtccg
     4261 cgatccggct cgaatcgacc accaccgact ccgatgctgc cagcaccgcc ccgaccgcgg
     4321 gccacaatcc ggtctctctc accctggtgc tgtcgggccg tgggtccggc tggtagccga
     4381 agcagcgcat gacgcccgca ctgccttcgc ccgcgaggag gagatcgccg ccccgggcgg
     4441 actcgtgcca ctcgagcaac tggcgggtct ccgaggcgct gtagggaatg agcggatcga
     4501 cgacggccat cacggtgggg gccgaatcgc tgagggcccc gagctgccgg gtgccgcggc
     4561 gatagtgctc gaccctgagc ttgagcctgc ccagcgcgtc ggcgagcccg cgggccccga
     4621 gcggtcccgc gaggtaggaa gatgcacggg ggtcgagctg ctcgggccgg ttgccccgcc
     4681 gctcgagcgc cccggccaga atccccagca gcgccaggga cccgagggcc agcgcggcct
     4741 cagtgcgagg ccgcataccg ctccgatcgg ctccgctcct gccagcgcac gaagtcgtcc
     4801 tgcccgcagg gctcacgggc aaaggcgtag tggtagagcg agcccgccag ctcccggagg
     4861 gcagcgcgca ccggggctcc gcccttcacc tcggcgctgt actcgtatgg cgtcttgctg
     4921 ggatgaaact gcagcacccc gagctggtcc agctccagca ccagaccaag gaagtcggcc
     4981 tgcatcgcct cgacatagcg cccctccgcc gcaaggcgcc gcgcctgctg gcggtaccag
     5041 ctcgcgccgc ggagctccgg ggtcgagggc gcgtcatgc
//
LOCUS       DATIFF010001120         1917 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_758679, whole genome shotgun sequence.
ACCESSION   DATIFF010001120 DATIFF010000000
VERSION     DATIFF010001120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1917
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_758679"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..776
                     /locus_tag="VLD58_16335"
     CDS             <1..776
                     /locus_tag="VLD58_16335"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSB55933.1"
                     /translation="LARMGATVLVTARDPGRGRDTAEEIRRDTGREVAVLPADLASQA
                     SVRELAAEVRRRTDRLHVLLNNAGAIYTTRQLSPDGHELTLALNHLGYFLLTNLLLDL
                     LRSGAPSRVVNVASAAHRRGRIDWDDLQGERRYGGGWKAYSQSKLANILFTRELARRL
                     QGSGVTANCLHPGVVATGFGHNNPTLFGTLVKLAAPLFISPARGADTAVWLATAPEVA
                     GVSGEYFARRRPIPSTRAGQDPEAARRLWEVSERLTGLA"
     gene            complement(786..1508)
                     /locus_tag="VLD58_16340"
     CDS             complement(786..1508)
                     /locus_tag="VLD58_16340"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HSB55934.1"
                     /translation="MDHRGTGPGLQPGAGGEGFAFNHGPSCPPLGFHAKKKSLVAKER
                     NTDRIRAWRDRFLETVRALAASRLVFVDETGTHVSMTREYARGLSGERVVGFVPRQRG
                     VTLTVVGAVALDGVRALMAYEGGTSGEAFLRFVREALVPSLHEGDVVVLDNLGAHRAA
                     GVREAIEAAGARILYLPPYHPELNPIELAWSKLKALLKRMEARDYQALAAALKHCKDK
                     LTPPDMAGWFHHCGYQLPARCA"
BASE COUNT          285 a          668 c          673 g          291 t
ORIGIN      
        1 agctggcccg catgggggcc accgtgctgg tcaccgcccg cgaccccggg cgcgggcgcg
       61 acaccgccga ggagatccgc cgcgacaccg ggcgcgaggt ggcggtgctc ccggccgacc
      121 tggcctcgca ggcctccgtc cgggagctgg cggccgaggt gcggcgccgc accgaccggc
      181 tgcacgtgct gctcaacaac gccggggcca tctacaccac gcggcagctc tcgcccgacg
      241 gccacgagct caccctggcg ctgaaccacc tcggctactt cctgctcacc aacctgctgc
      301 tggacctgct ccgcagcggg gcgccctcgc gggtggtgaa cgtcgcctcg gcggcccacc
      361 ggcgcggccg catcgactgg gacgacctgc agggcgagcg gcgctacggc ggcggctgga
      421 aggcctacag ccagtccaag ctcgccaaca tcctcttcac gcgagagctg gcgcggcgcc
      481 tccaggggag cggcgtcacc gccaactgcc tgcaccctgg ggtggtggcc accggcttcg
      541 gccacaacaa ccccaccctc ttcgggaccc tggtcaagct ggccgccccg ctgttcatct
      601 ccccggcccg gggggccgac accgcggtgt ggctcgccac cgcgccggag gtggccggcg
      661 tctccggcga gtacttcgcc aggcgcaggc ccatcccctc gacgcgggcc ggccaggacc
      721 cggaggcggc gcggcggctc tgggaggtga gcgagaggct caccggcctg gcctgatggc
      781 ggtgatcagg cgcatcgagc cgggagctgg tacccgcagt ggtggaacca accggccatg
      841 tcgggaggcg tgagtttgtc cttgcagtgc ttgagagctg cggcgagggc ctggtagtcg
      901 cgggcctcca tccgtttgag taaggctttg agcttgctcc aggccagttc gatggggttc
      961 agctcggggt ggtagggcgg gagatagagg attcgcgcgc cggccgcctc gatggcttcc
     1021 cggacgcctg cggcgcgatg ggcaccgagg ttgtccagga cgacgacatc gccctcgtgg
     1081 agtgagggaa cgagtgcttc gcgaacgaaa cggaggaagg cctcgccaga ggtgccgcct
     1141 tcgtaggcca tcagggcacg tacaccgtcc agggccacgg ctccgacgac ggtcagggtg
     1201 acgccacgct ggcgagggac gaatccgacc acgcgctcgc cgctcaggcc gcgcgcgtac
     1261 tcccgggtca tcgagacgtg cgtacccgtt tcgtccacaa aaaccagacg cgaagcggcg
     1321 agggcgcgga ctgtttcgag gaagcggtcg cgccaggcgc ggatgcggtc ggtgttgcgc
     1381 tccttggcga ccagggactt ttttttcgcg tgaaacccaa gcggcggaca gctcggtcca
     1441 tggttgaacg cgaaaccttc gccccctgct cctggctgta ggcccgggcc agttcctcga
     1501 tggtccagtc cggattggct cggagcagcc gttcgaccct tgccaacttc cccggtggaa
     1561 tcttgggctt ctggccacca ccgtgcggac gcggctcaac cgaaccggtg tccttgaatc
     1621 gaccgatgag ccgcttgacc gtcgccgtgc cgacagtgaa ccggctcgcg agttcgggga
     1681 cgcttcgctt ctctgcctgc cacgcctgca caatcctgcg acggaggtcg atcgagagcg
     1741 gtctcatgcc caggttcgat cacatctacc ggatcgaggc aagagggtac cgccatgatg
     1801 gccgtggcca cacgcgtgga tccggcggct gcgccgccgg cgggggacga gcccccgccc
     1861 tacgggatcg tggcaagcgg gcacggcctg gcggtaccct cttgcctcga tccggta
//
LOCUS       DATIFF010001121         6055 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_298283, whole genome shotgun sequence.
ACCESSION   DATIFF010001121 DATIFF010000000
VERSION     DATIFF010001121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6055
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_298283"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            74..445
                     /locus_tag="VLD58_16345"
     CDS             74..445
                     /locus_tag="VLD58_16345"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HSB55935.1"
                     /translation="MSLELTERELDVMEVLWEQGSGTVSEVRRRMPDRLAYTTVLTVL
                     RTLETKEMVRHEGEGKAYRYLPLVRREDVVHGAVKRLMGRLFSGSPELLVTHLVSDHK
                     VDAGELRRLRRMLDTRLKDKS"
     gene            442..1578
                     /locus_tag="VLD58_16350"
     CDS             442..1578
                     /locus_tag="VLD58_16350"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HSB55936.1"
                     /translation="MSHAAWGLYAIWIGALFTAAAWLAARAAVLAGRPTRWIWVGASA
                     ATVLLPLVMLAWPGAAGRASVAWGPVVEWPIAGNTDQAANSLAVDESPAAPVRLDPTT
                     AWLLLSLAALGWVLHSQRRLARSRKTWRRTILGGHPVEVSPDFGPAVVGILRPGIVVP
                     EWATTLSQAELDLILRHESEHLSRHDSRLLAVLVGCIVALPWQPFLWLQLAGLRLAIE
                     YDCDQRVLAATPRRRYADLLLRLAERCRWPGSAVTWGLPLVTLWRRPSQLERRLRAIL
                     RDRLTPLERAGVLVALSVALIATAAAWLTPPPSKNVPAPASVASARPASVLPQGVRND
                     GPRIYWDVTRVGGRPNAGAPGELIRKTGLFFQVAPPPLRRADGC"
     gene            1732..2229
                     /locus_tag="VLD58_16355"
     CDS             1732..2229
                     /locus_tag="VLD58_16355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55937.1"
                     /translation="MRCSILLLGSCLLACSGAPSQPVPVVGSATDVATMAGEWAGFYE
                     ADDGTRGGTIDFHLKAGSDTAQGDILMVPREWGQPLESYDRPVADAANAPSPRTLTIR
                     FVGIRGDSVSGRLDPFRDPACGCRVQSTFAGHLKGNTLKGRYESYHEETGRVVTGKWQ
                     AKRKT"
     gene            complement(2234..4384)
                     /locus_tag="VLD58_16360"
     CDS             complement(2234..4384)
                     /locus_tag="VLD58_16360"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HSB55938.1"
                     /translation="MSAPTLPTATPSVCPHCGMGCAVALQTEGGRLVRSAPRDRAGGP
                     LCVRGKAGHAFVHHPDRLTTPLIRREWHRESDCWVWHGESRGLIPDPAAPEASWASHY
                     RSASWDEALELVAERLGYLRDMYGPQVLAGLGSAKCSNEENYALVRLIRGALGSGNID
                     NCARLCHAASVAALRRQLGTAAASGSYGDLAQANVILLAGVNPTESYPALGTRLLKAV
                     QRGTRLIVVDLRRTEIAEKAHLHLRPRPGTDAMLYLAMLHQVMQRKLVDTAFVTARTE
                     GFEEVAEAARELSLSRASDVTGVPVEDIIAAAELFARGPASCTMWGMGLTQHLRGTEA
                     IASLVNLALACGMVGRPGAAIMPIRGQNNVQGACDMGALPDVYPDHQPVVDAAVRARF
                     AAIWGVPVERLATLPGHRSTAMSHADPPIRALYVLGENPALSGPATGEIEQWLRQLDF
                     LVVHDLFVTETARFADVILPGAAFAEKEGTYVNAERRIQLGEVALLPPGEARHELAVL
                     AELTERLGVPVRARDAAGTMEEIARACPDWAGVSYGRLRSRGSLQHPVTAQAPSGTER
                     LYTQRFSTPSGRAQFLAMDVTPPQLEPNPEFPFVVLTGGTRFHRQTATMTRRGPDLNQ
                     RNRQALATLHPDDLARLGLGEGDWVHLSSPHARITLQVGASKQVQHGQVFLPTHFREA
                     AVNRLVGHAVDPRSGTPSFKHLMARIERAEDPAL"
     gene            complement(4477..4905)
                     /locus_tag="VLD58_16365"
     CDS             complement(4477..4905)
                     /locus_tag="VLD58_16365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 sterol-binding domain-containing protein"
                     /protein_id="HSB55939.1"
                     /translation="MSDSEALLIFSDDWARACALVLNQGEGYRAAAATWEAIIVLTMT
                     EVAPKGGERRVLLDLFQGACRAARAGNADDETGAHYVMSGSELAWRQVLTGTVPPLMA
                     IMTGKIRLAKGNLMELLPYVSAARELVMAAAKVPTSNRES"
     gene            complement(4902..5981)
                     /locus_tag="VLD58_16370"
     CDS             complement(4902..5981)
                     /locus_tag="VLD58_16370"
                     /inference="COORDINATES: protein motif:HMM:NF016274.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HSB55940.1"
                     /translation="MTFTPNSPAALGFRMPAEWVPHRGTWLSWPHRESSWPGKFGPVP
                     GVFVEIVRHLVPHEEVHLNVAGAEMEAVVRELLQAGDVPLTAPGGSKARVFFHHNPTN
                     DAWCRDHGPIFLQRETASGRKEQAIVDWGFNAWGGKYPPYDLDDVVPTRVGKKFGIRV
                     FDGGIIMEGGSLDVNGKGTLLTTESCLLNPNRNPGHSREQIEQKLRDFLGVTNILWLG
                     DGIEGDDTDGHVDDLTRFVDENTVVTVVEEDPRDSNYTPLKDNLERLRGMRDQDGRPF
                     RIVTLPMPPAMHYEEQRLPASYANFYIANNLVLLPAYDPATDAIAQKVLQPLFPGRRV
                     LLVNSRDLVWGLGSFHCVTQQWPAL"
BASE COUNT          874 a         2058 c         2124 g          999 t
ORIGIN      
        1 agttgacagc tcgccgccca gagcgtaggt tgaaccggtg acctactagt gcattagttg
       61 aaacggagcc gccgtgtcgc tggagctgac cgaacgggag ttggacgtca tggaggtgct
      121 gtgggagcag ggctccggca ccgtgagcga ggtccgccgc cgcatgccgg accggctcgc
      181 ctacaccacc gtgctgacgg tgctccgcac cctcgagacc aaggagatgg tgcgccacga
      241 gggcgaaggg aaggcctacc gctatctccc cctcgtccgc cgggaggacg tggtgcacgg
      301 agcggtcaag cgcctcatgg gccggctgtt cagcggttcg ccggagctgc tggtcactca
      361 cctggtcagc gatcacaagg tcgacgcggg cgagctgcgc cgcctgcgcc ggatgctgga
      421 tacccgtctc aaggacaaat catgagtcac gctgcctggg gtctctacgc catctggatc
      481 ggcgcgctct tcaccgcggc ggcatggctc gccgcgcggg ccgcggtcct tgccggccgg
      541 ccgacccggt ggatctgggt cggcgcgtcg gccgccacgg tcctcctgcc gctcgtgatg
      601 ctggcctggc cgggtgcggc gggacgggcc agcgtggcat gggggcctgt ggtcgagtgg
      661 cccatcgcgg gcaacaccga tcaggccgcc aactcgctcg ccgtcgacga gagtccggct
      721 gctccggtgc ggctcgatcc aacgacggcg tggctcctcc tctcgctcgc ggcgctcgga
      781 tgggtgctgc actcccaacg gcgtctggcc cgctcccgga agacctggcg ccggaccatc
      841 ctcggcgggc acccggtaga ggtctctccc gatttcggcc cggcggtggt gggaatcctc
      901 cggcccggca tcgtggtgcc tgaatgggcc accaccctct ctcaggccga gctcgacctg
      961 atcctgcgcc acgagagcga gcatctatcc cggcacgatt cacgcctcct ggcggtgctg
     1021 gtcggctgta tcgtcgccct gccgtggcag ccttttctct ggcttcagct ggccgggctt
     1081 cggctggcga tcgaatacga ttgtgaccag cgggtgctgg ccgccacgcc ccggcgccgg
     1141 tatgccgacc tgctgctgcg gctggcggag cggtgccgct ggcccggcag tgcggtgacc
     1201 tggggacttc cgctcgtcac gttgtggagg cggccctcgc agctcgagcg ccgcttgcgg
     1261 gccatcctgc gcgatcggct tacgcctctc gagcgggccg gcgtcctcgt ggcgctgagt
     1321 gtggcgctga ttgccaccgc cgctgcctgg ctgacgccgc cgccgagcaa gaacgttcca
     1381 gcgccggcgt cggtggcgtc ggccaggccg gcctcggtcc tgccgcaggg cgtccggaac
     1441 gacggcccga ggatctactg ggatgtgacc cgcgtcggag gccggcccaa cgccggagcc
     1501 ccaggagagc tgatccggaa gaccgggctc ttcttccaag ttgcgccgcc accgctgcgc
     1561 cgcgcggacg gctgctaggc gccagcttcc gagcgccgcc cgaaccgcca tcgtttcctg
     1621 gtgaaccggt ggcggttctt tttcgtccgc ttcatccatg gttcattggt ggctcaccgc
     1681 aatgggacct cgccgcgcta gattgaaatc gtctcgcacg aggagtggtc catgcgatgc
     1741 tcgatcctgc tgctcggctc ctgcctgctc gcctgcagcg gcgccccgtc acaacccgtt
     1801 cccgtggtcg ggtccgcgac cgacgtcgcc accatggccg gtgagtgggc cgggttctac
     1861 gaagcggacg acggcacccg cggcgggacg atcgactttc acctcaaggc cggcagcgac
     1921 acggcccagg gtgacatcct gatggtcccg cgtgagtggg gccagccgct cgagtcctac
     1981 gaccgcccgg tcgccgacgc ggcaaacgcg ccgagtcccc gtaccctgac catccgtttc
     2041 gtcggaatcc ggggcgactc ggtctcgggg cggctcgatc cgttccgcga tccggcctgc
     2101 ggttgccggg tgcagtcgac ctttgccggc cacctcaagg gcaacaccct caaggggcgg
     2161 tacgagagct atcacgagga gaccggtcga gtcgtgaccg ggaagtggca ggccaagcgg
     2221 aagacctgac gccctagagc gccgggtcct ccgcccgttc gatccgcgcc atcaggtgct
     2281 tgaaggatgg ggtgcctgag cgcgggtcca ccgcatgtcc caccagccgg ttcaccgccg
     2341 cctcccggaa atgcgtcggg aggaatacct gcccatgttg cacctgtttg ctcgccccga
     2401 cctgcagggt gatccgcgcg tgtggtgagc tgaggtgcac ccagtcgccc tctcccagtc
     2461 ccagccgcgc gagatcatcg ggatggaggg tggcgagggc ctgtcggtta cgctggttga
     2521 gatcgggacc gcgccgggtc atcgtggcgg tctgccggtg gaaccgggtc ccgccggtca
     2581 gcaccacaaa ggggaattcg gggttgggct cgagctgggg cggtgtcaca tccattgcca
     2641 ggaactgggc ccgccccgag ggcgtcgaga aacgctgggt gtagaggcgc tcggtgccgc
     2701 ttggggcctg ggccgtgacc ggatgctgca gcgatccacg ggaacgaagc cggccgtagc
     2761 tcacccccgc ccagtccgga cacgcccgcg caatctcctc catggtgccg gcggcgtccc
     2821 gcgctctcac ggggactccc agccgctcgg tgagttcggc cagcaccgcg agctcgtgcc
     2881 gggcttcgcc cggcggcagg agagccacct cgcccagctg aatgcgccgc tccgcattca
     2941 cgtaggtccc ctctttctcg gcaaaggcgg cgcccgggag aatcacgtcg gcgaagcgcg
     3001 ccgtctcggt gacgaagaga tcgtgtacca ccaggaagtc gagctgccgg agccactgct
     3061 cgatctcccc cgtggcaggg ccggacaggg cggggttctc gcccaggacg tagagggcac
     3121 ggatcggtgg atcggcgtgg ctcatcgcgg tggagcggtg gccggggagc gtcgccagcc
     3181 gctcgaccgg tactccccat atcgcggcga agcgggcccg caccgccgcg tcgaccaccg
     3241 gctgatggtc ggggtagaca tctgggagtg ctcccatgtc gcaggcgccc tgcacgttgt
     3301 tctgcccccg gatcggcatg atcgcagcgc ccggccgccc caccatgcca caggccagcg
     3361 ccaggttcac caggctcgcg atcgcctcgg tgcctctgag gtgctgggtc agccccattc
     3421 cccacatggt gcagctggcg ggaccgcggg caaagagctc cgcggcggcg atgatgtcct
     3481 cgaccgggac cccggtcacg tcgctcgccc gcgagagtga aagttcgcgg gccgcctctg
     3541 ccacctcctc gaagccctcg gtccgtgcgg tcacgaaggc ggtgtcgacc agcttccgct
     3601 gcatgacctg gtgcagcatt gcgaggtaga gcatcgcatc ggtgccgggc ctgggccgca
     3661 ggtggaggtg tgccttctcg gcgatctcgg tgcggcgcag atccaccacg atgaggcggg
     3721 tgcctctctg caccgccttg agcaggcggg tgccgagcgc cggatacgat tcggtgggat
     3781 tgaccccggc caggaggatg acgttggcct gcgcgaggtc gccataggaa cccgaggccg
     3841 cggcggtacc cagctggcgc cggagcgccg ccaccgaggc ggcatgacag agccgggcgc
     3901 agttgtcgat gtttccgctc ccgagcgcgc cccggatcag gcgaaccagc gcgtagttct
     3961 cttcattgct gcacttggcc gaccccagtc cggccagcac ctgcggcccg tacatgtccc
     4021 tgaggtaccc gagccgttcg gccaccagct ccagcgcctc gtcccagctc gcggagcggt
     4081 agtggctggc ccacgatgcc tccggcgccg cggggtcggg aatcaggccg cgcgactcgc
     4141 cgtgccagac ccagcaatcg ctctcgcggt gccactcccg ccggatcagc ggagtggtga
     4201 gtcgatcggg atggtgtacg aaagcgtgtc ccgccttgcc cctgacgcac agcggcccgc
     4261 cggcgcgatc gcgcggggcc gagcgcacca gccggccacc ttcggtttga agcgcgacgg
     4321 cgcagcccat gccgcagtgg gggcagaccg acggagtggc tgtgggcagg gtaggcgctg
     4381 acatccggga atctccagag gggcgacttg catactagtc gccggcctgt gaagtccgga
     4441 tgaggttgcg ctaaaccggc aggaccaatc tgctagtcag gattcccgat tcgaggtggg
     4501 gaccttcgcg gcagccatga ccagctccct ggccgcgctc acgtagggca ggagttccat
     4561 gaggttcccc tttgcgaggc ggatcttccc ggtcatgatc gccatgaggg gcgggacggt
     4621 gccggtcagc acctggcgcc aggccagttc ggatccgctc atcacgtagt gggcgccggt
     4681 ctcatcgtcg gcgtttccag cgcgggccgc gcggcaggct ccctggaaga ggtccagcag
     4741 gacccgccgt tcgcctccct tcggtgccac ctcggtcatc gtcagcacga tgatcgcctc
     4801 ccacgtggcg gcggcggccc ggtatccctc gccctggttg agcaccaggg cgcaggcccg
     4861 ggcccagtcg tccgagaaga tcagcagggc ttcggagtcg ctcacagagc cggccactgc
     4921 tgagtgacgc aatggaacga gcccagtccc cagaccaggt cgcgggagtt gaccagcagc
     4981 acccggcgcc cggggaagag tggctgtagc accttctggg caatcgcgtc ggtggcggga
     5041 tcgtacgccg gcagcagcac caggttgttg gcgatgtaga agttggcgta gctcgccggg
     5101 aggcgctgct cctcgtagtg catggcggga ggcatgggca gggtgacgat ccggaagggc
     5161 cggccgtcct ggtcccgcat gccccggagc cgctcgagat tgtccttgag cggggtgtag
     5221 ttgctgtccc gcggatcttc ctccaccacg gtgaccacgg tgttctcgtc cacgaagcgg
     5281 gtgagatcgt cgacgtgccc gtcggtgtcg tctccctcga tcccgtcgcc cagccagagg
     5341 atgttggtga cgccgagaaa gtcgcggagc ttctgctcga tctgctcccg gctgtggccg
     5401 ggattgcggt tgggattgag aaggcagctt tcggtggtga gcagggttcc tttcccgttc
     5461 acgtcgaggc tgcccccttc catgatgatc ccgccgtcga acacccggat gccgaacttc
     5521 tttcccaccc gggtcgggac cacatcgtcc aggtcgtagg gcggatactt cccgccccag
     5581 gcgttgaagc cccagtcgac gatggcctgt tccttccggc ccgaggcggt ttcgcgctgg
     5641 aggaagatgg ggccgtgatc ccggcaccag gcgtcgttgg tcgggttgtg atggaagaag
     5701 acccgcgcct tgctgccgcc gggcgcggtg agcggcacgt cacccgcctg cagcagctcc
     5761 cgcaccaccg cttccatctc ggcgccggcg acattgaggt gcacctcctc gtggggcacg
     5821 aggtggcgga cgatctcgac gaacacgccc ggtaccgggc cgaacttccc gggccaggag
     5881 gattcccggt ggggccacga cagccaggtg ccgcgatggg gcacccactc ggccggcatg
     5941 cggaagccga gtgcggcggg agaattgggt gtgaaggtca cgcggtgagc cgggatcagt
     6001 cgatgtagcg ccgggtgagg tcgccgtagg actccacccg ccggtcgcgg aggaa
//
LOCUS       DATIFF010001122         3900 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1681001, whole genome shotgun sequence.
ACCESSION   DATIFF010001122 DATIFF010000000
VERSION     DATIFF010001122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3900
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1681001"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1503
                     /locus_tag="VLD58_16375"
     CDS             <1..1503
                     /locus_tag="VLD58_16375"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HSB55941.1"
                     /translation="VNADLPLDLGFKGVERRQLDGPLTVRARADSADLGLLEAVFPGI
                     EDVEGQVVAEAEVAGTWAHPQVSGFANVSHGAMTIPGIGLRYAAILARGELRGDSLIV
                     PYALVTSGGGTLQITGGLRFDSLSRPLLNLDLEANRFQALNIRNFLSFTATGNAHLGG
                     PVLAAHATGTATVNQGYLYFADLINKQIINLEDPTIADLVDTSLVRRANLGAAFQNRF
                     LDSLTVDSLALTMGEGFFLRSTEANIQLAGQLTVSKVRREYRPVGTLGAVRGTYALKI
                     GPVTREFTVTQGTVKYFGTPDLNAELDITAQHVVRTVRTNEEVPVVARITGTLFAPKL
                     ALESPVRPPIPETDLASYLIFGAPAGDAIASGQATQSALQNVVAAFSSEVERFLISDL
                     GVPIDYVEFQPGIATAGGASVSRFAFGWRIGSRSFITLNAGFCGGAAQSTAFGAQNFG
                     ATFEYRFSQAWRFQTSFEPTFSSCTVGGYSSYLTTSRYQIGADLFWEREF"
     gene            1506..2405
                     /locus_tag="VLD58_16380"
     CDS             1506..2405
                     /locus_tag="VLD58_16380"
                     /inference="COORDINATES: protein motif:HMM:TIGR00147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HSB55942.1"
                     /translation="MARALLITNPAAARTEPLAVNVVRDVLRAAGWVTEVLATGGPGD
                     ARRLAEYGVREAVDLVAVFGGDGTTMQAAAALVGTDVALGLVPGGTGNLLAGNLRIPA
                     SPARAAEVLARGRTRRLDLGRMERPTGTHYFAVACGAGMDARVMAGTASVHKRRWGMA
                     AYVATTLRLIGDVRSMPHHITVDGAEYDANAAMVLVANCGEVFPPWVRLGAGITPDDG
                     LLDVVVMRADSVGQSVRAVWELLRAGAVERRAGGLVGYARGREITVRTEAPEPVQLDG
                     EPDGQTPFTAVVVPAAIRVVTPE"
     gene            2711..>3900
                     /locus_tag="VLD58_16385"
     CDS             2711..>3900
                     /locus_tag="VLD58_16385"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSB55943.1"
                     /translation="MADSVLLIDDDVDVLRGIGNYFERLGYEVTRELSGEAGLATFDR
                     VRPDVVVLDLRLPGMDGMEVLEHLRQRDAAVILLTGNSDIATAVRAMQLGAENFLTKP
                     VDMAHLAAATARVADKVRLRRVNEALLGQSAAGPGLDSLGGSAAMQEFAHQVGLLAQS
                     ERTTVLLNGESGTGKGWVARMIHDLSPRAKAPFVEVNCGGLNATFLDSELFGHEKGAF
                     TDAKDRKQGLFEIADHGTIFLDEIGDLAPELQPKLLKVLETKTFRRLGGTREITVDVR
                     LIAATNKNLQAEVEAGRFREDLYYRLSVMPLTLPAVRERSREDRLALITRLMNDLTTE
                     LPEAPATLSAEALERLLTYPWPGNVREMRNVLERAMILGRCQPAISVEHLPGEFRARP
                     GVGDR"
BASE COUNT          584 a         1345 c         1368 g          603 t
ORIGIN      
        1 gtcaacgcgg acctgcccct cgacctcggc ttcaagggcg tcgagcgccg gcagctcgac
       61 ggcccgctta ctgtgcgcgc gcgcgcggac agcgcggacc taggcctgct cgaggcggtc
      121 ttcccgggca tcgaggacgt agaggggcag gtcgtcgcgg aggctgaggt ggccggcacc
      181 tgggcgcatc cccaggtgag cgggttcgcc aacgtgagcc acggcgcgat gaccattccg
      241 ggcatcgggc tgcgctatgc ggcgatcctc gcccgcggcg agctgcgggg cgactcgctg
      301 atcgtgccct acgcgctggt cacgagcggc ggcggcacgc tccagatcac cggcggactc
      361 cgattcgaca gcctctcccg gccgctcctc aacctcgatc tcgaggcgaa ccgcttccag
      421 gcgctcaaca ttcgcaactt tttgagcttc acggccaccg gcaacgctca tttggggggg
      481 ccggtcctcg ccgcccatgc gacgggtacc gctacggtga accagggcta tctctacttc
      541 gcggatctga tcaacaagca gatcatcaac cttgaggacc ccactatcgc ggacctggta
      601 gacacctcgc tcgtccgtcg cgcgaacctg ggcgccgcct tccagaaccg cttcctcgac
      661 tctctcacgg tggactcgct cgcgcttacg atgggcgagg gcttcttcct ccggtccacc
      721 gaggccaaca tccagctcgc ggggcagctc accgtgagca aagtccggcg cgagtaccgg
      781 ccggtgggca cgctgggcgc ggtgcggggc acctacgccc tcaagatcgg gccggtcacc
      841 cgcgaattta ccgtcaccca ggggacggtg aagtacttcg ggacgccgga cctcaacgcc
      901 gaactcgaca tcacggcgca gcacgtggtg cggaccgtgc ggaccaacga ggaggtcccg
      961 gtcgtggcgc ggatcaccgg cacgctcttc gcgcccaagc tggcgctgga gagcccggtg
     1021 cggccgccaa tcccggagac cgacctcgcc tcctacctca ttttcggcgc gcccgccggc
     1081 gatgcgatcg cctcgggcca agcgacccaa tcggccctcc agaacgtggt ggccgccttc
     1141 tcgagcgagg tggagcggtt cctcatctcg gatctcggcg tcccgatcga ttacgtggag
     1201 ttccaaccgg gcatcgccac cgccggcggc gcatcggtca gccggttcgc gttcggctgg
     1261 cggatcggca gccgcagttt catcacgctc aatgccggat tctgcggcgg cgcggcccag
     1321 tccactgcgt tcggggcgca gaacttcggt gcgacgttcg agtaccgctt cagccaggcc
     1381 tggcgcttcc agaccagctt cgagccgacg ttcagctcgt gtacggtggg cgggtacagc
     1441 agctacctca cgaccagccg ttaccagatc ggcgcggacc tgttctggga gcgggagttc
     1501 taggcatggc gcgcgcgctc ctcatcacca acccggccgc ggcccgcacc gagccgctcg
     1561 cggtgaacgt ggtccgcgac gtgctccgcg ccgccgggtg ggtgaccgag gtgctcgcga
     1621 ccggcgggcc cggcgacgcc cgccggctcg cggagtacgg cgtgcgcgag gcggtggatc
     1681 tggtcgccgt gttcggaggc gatggcacca cgatgcaggc ggcagcagcc ctcgtgggca
     1741 cggacgtggc ccttggtctc gtgcccggtg gaaccggcaa cctgctggcg gggaacctcc
     1801 ggatccccgc atcgcccgcg cgcgcggcgg aggtcctggc gcggggccgc acccgccggc
     1861 tcgacctggg tcggatggag cgtcccactg gcacgcacta cttcgcagtg gcctgcggtg
     1921 cggggatgga cgcccgggtg atggccggga cggcctccgt gcacaagcgg cggtggggga
     1981 tggcggccta cgtggccact acgctccgcc tgatcggcga cgtgcgcagc atgccgcacc
     2041 acatcaccgt ggacggagcc gagtacgatg cgaacgcggc gatggtcctg gtggccaact
     2101 gcggcgaggt gtttccgccc tgggtccgtc tcggggcggg gatcacaccc gacgacgggc
     2161 tcctggacgt cgtcgtgatg cgggccgaca gcgtgggcca gagcgtgcgg gccgtgtggg
     2221 agctgctgcg cgccggggcg gtcgagcgga gggcgggcgg cctggtcggc tacgcccggg
     2281 gccgggagat caccgtccgg acggaggcac cggagccggt gcagctcgac ggcgagccgg
     2341 acgggcagac ccctttcacg gccgtggtgg tgccggcggc gatccgggtc gtaacccccg
     2401 agtgaagatc cggccgccgc gaccggatcc aggcggcggg ttggtgacaa ctgcggaccc
     2461 gactgcgact gcggaccaca gaggcacgga gtcacagaga acgaccaccg agcaaggcga
     2521 ctgaaatgtc gttcctccgt ggttgttctc cgtgcccctg tgcctctgtg ggttcacagt
     2581 cctcggtccc tgcgtccctg ctctctccag ctgttcctgt ttttgacagt tggtgctaag
     2641 tttcggcttc acggggctgt caaaggaaag cactctctcg aggccggccg gatggccggg
     2701 tcttgataag atggcggatt ccgtcctgct gatcgacgac gacgtggacg tcctgcgggg
     2761 catcggtaac tacttcgagc gcttgggcta cgaggtcacc cgcgagctga gcggggaagc
     2821 cgggctggcc acgttcgacc gggttcgccc cgacgtcgtg gtgctcgacc tcaggctccc
     2881 gggtatggat gggatggagg tcctggagca tctccgccag cgcgacgctg ccgtcattct
     2941 tctcaccggc aacagcgata tcgccaccgc agtccgggcc atgcagcttg gcgcggagaa
     3001 ctttctcacc aagccggtgg atatggcgca cctcgcggcg gcgaccgcgc gtgtggccga
     3061 caaggtccgc ctacgccggg tcaacgaggc cctgctcggc cagagcgcgg ccgggcccgg
     3121 gctcgactcc ctcggcggct cggccgcgat gcaggagttc gcccaccagg tgggcctact
     3181 cgcccaaagc gagcggacca cggtgctgct gaacggggag agcggcacgg gaaaggggtg
     3241 ggtcgcccgc atgatccacg acctgagccc gcgggccaag gcgccgttcg tggaggtcaa
     3301 ctgcggcggg ctcaacgcca ccttcctcga ctccgagctg ttcgggcacg agaagggcgc
     3361 gttcaccgac gccaaggacc ggaagcaggg cctcttcgag atcgccgatc acgggaccat
     3421 ctttctcgac gagatcggcg acctcgcccc cgagctgcag cccaagctcc tgaaggtgct
     3481 cgagaccaag accttccgcc ggctgggcgg gacccgcgag atcacggtgg acgtgcgcct
     3541 gatcgcggcg accaacaaga acctccaggc cgaggtggag gcggggcgct tccgtgagga
     3601 tctgtattac cgcctcagcg tcatgccgct cacgctgccc gcggtgcgcg agcgctcgcg
     3661 cgaggaccgg ctcgccctga tcacccgcct catgaacgat ctcacgaccg agctgcccga
     3721 ggcgcccgcg accctgtcgg cggaagcgct cgagcggctg ctcacctatc cctggcccgg
     3781 gaacgtgcgg gagatgcgga acgtgctcga gcgcgccatg atcctggggc ggtgccagcc
     3841 cgcgatcagc gtcgagcacc tgcccgggga gttccgggca cggcccggcg tcggcgaccg
//
LOCUS       DATIFF010001123         1268 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2143388, whole genome shotgun sequence.
ACCESSION   DATIFF010001123 DATIFF010000000
VERSION     DATIFF010001123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1268
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2143388"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /locus_tag="VLD58_16390"
     CDS             <1..238
                     /locus_tag="VLD58_16390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979518.1"
                     /note="ATP-binding protein; PstABCS is an ATP dependent
                     phosphate uptake system which is responsible for inorganic
                     phosphate uptake during phosphate starvation; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HSB55944.1"
                     /translation="PCSALDPIATERIEELIVELKRQYTIVIVTHNMQQASRVSEFTG
                     FFYLGRLVEFGDTAQVFTRPRDERTEAYITGRFG"
     gene            235..960
                     /gene="phoU"
                     /locus_tag="VLD58_16395"
     CDS             235..960
                     /gene="phoU"
                     /locus_tag="VLD58_16395"
                     /inference="COORDINATES: protein motif:HMM:TIGR02135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HSB55945.1"
                     /translation="MTDTRNREGSPPAPRSGGGAVHRHFHDELSELKSTLLAMSAEAQ
                     TALASAVEALLQRDAGKAAQVISGDHRIDAMENEIEEQVVRLLATQQPMARDLRLLMA
                     ALKIANDLERVGDHAVNIAQSAERLLAAPAIVPEPEVVEMARLARRMLADALDAFVRT
                     DAQAGRAVCQRDDLVDALHDSVFRILLTHMMETPHIITAAMELFLVSRNLERVADLAT
                     NIAEDVVFLVEGKSIKHHAEVSR"
     gene            complement(971..>1268)
                     /locus_tag="VLD58_16400"
     CDS             complement(971..>1268)
                     /locus_tag="VLD58_16400"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HSB55946.1"
                     /translation="AYLLLYPRVRVHALLPLGFYITTITMPAYVMLGYWILLQVLGSL
                     PALGSHQAGGTAFLAHIGGFVAGLVLIRLFAKREYLERRVVLPGGYGWGGQGGR"
BASE COUNT          226 a          433 c          430 g          179 t
ORIGIN      
        1 gccctgctcg gcgctcgatc ccatcgccac cgagcggatc gaggagctga tcgtcgagct
       61 gaagcgccag tacacgatcg tgatcgtcac gcataacatg cagcaggcat cccgggtctc
      121 ggagttcacc gggttcttct acctcggtcg cctggtggaa ttcggcgaca cggcgcaggt
      181 tttcactcgg ccgcgggacg agcggaccga ggcctacatc accgggaggt tcggttgacc
      241 gatacacgaa accgggaagg atcgcccccg gcaccgcgct cgggcggggg cgcggtgcac
      301 cggcatttcc acgacgagct gtccgagctc aagtcgacgc tgctggcgat gtccgccgag
      361 gcgcagacgg cgctcgcgag cgcggtcgag gccctgctgc agcgcgatgc ggggaaggcc
      421 gcccaggtga tctcgggcga tcaccgcatc gacgccatgg aaaacgagat cgaagagcag
      481 gtggtacggc tcctggccac ccagcagccg atggcgcggg acctgcggct cctcatggcc
      541 gccctcaaga tcgccaacga tctggagcgc gtcggcgacc acgcggtcaa catcgcccaa
      601 tcggccgagc gcctgctggc ggccccggcg atcgtccccg agcccgaagt cgtggagatg
      661 gcgcgcctgg cccgccgcat gctggccgat gcgctcgatg ccttcgtgcg gaccgacgcg
      721 caggcgggcc gcgccgtctg ccagcgcgac gacctggtgg acgccctgca cgactcggtg
      781 ttccgaatcc tgctcaccca catgatggaa acaccgcaca tcatcaccgc ggcgatggag
      841 ctctttctgg tgagccgcaa cctcgagcgc gtggccgacc tcgcgaccaa tatcgcggag
      901 gacgtcgtgt ttctggtgga agggaagagc atcaagcatc acgccgaggt gagccgctga
      961 ctgcggaggg tcagcgcccc ccctgccccc cccacccgta tccccccggc aggaccacgc
     1021 ggcgctccag gtactcccgc ttcgcgaaca ggcggatgag caccagcccg gccacgaaac
     1081 caccgatgtg ggcgaggaag gcggtgccgc cggcctggtg tgaccccagg gccggcaggc
     1141 tgcccagcac ctgcagcaga atccagtagc ccagcatcac gtaggcgggc atcgtgatgg
     1201 tggtgatgta gaagccgagc ggcaatagcg cgtggacccg gactctggga tagagcagca
     1261 ggtaggcg
//
LOCUS       DATIFF010001124         2263 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2297279, whole genome shotgun sequence.
ACCESSION   DATIFF010001124 DATIFF010000000
VERSION     DATIFF010001124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2263
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2297279"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..694)
                     /locus_tag="VLD58_16405"
     CDS             complement(<1..694)
                     /locus_tag="VLD58_16405"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB55947.1"
                     /translation="MTSCPRCGEPWHEGEPACPHCGTRTHACPTCGGGVADGDRFCGH
                     CGSSQDGATITPGMIEPESSPWDEVLERLRKATLGEFQIKRELGRGGMAAVYLAHDIA
                     LNRKVAIKVMSPGLLMGPGMVERFKQEAITVANLNHPHIITIHAVRQMAGLHFFVMKL
                     IAGRSLELVVKDGGRLPVPVVQAILYQVGSALAYGHRRGVIHRDVKPGNILMDEDGNA
                     IVTDFGIAKVRES"
     gene            904..1581
                     /locus_tag="VLD58_16410"
     CDS             904..1581
                     /locus_tag="VLD58_16410"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HSB55948.1"
                     /translation="MFGGAVLLFASRRPFALAGVLLALSAGAARAQTSIEITPFLASF
                     YALSSVSEQTNIPLTDFQGSPPGDVIREQRDGPAFGVRVSFPVTGVIRAEGEVAYALS
                     DGSQTARPRDFPEAGLGTTSNAHVILASARAVFRPRRQNFFGLAGLGVVARGGTFWDN
                     ADQSARLAGVVGFGVRAAVSPQLSLTFTAEAYLYSFNYSSSNVPNSDSKFQQDIVVSV
                     GVPIGAR"
     gene            1595..>2263
                     /locus_tag="VLD58_16415"
     CDS             1595..>2263
                     /locus_tag="VLD58_16415"
                     /inference="COORDINATES: protein motif:HMM:NF039835.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55949.1"
                     /translation="MTRRLFRTSLLLGLLFGCSDQGPQVPLLFVKPPTGSNGAGTITS
                     SPGGISCTISNQTSVGACSANFESGAAVTLTASPAAGSTFSGWGGECDGTDPTCAVTL
                     DANADVTAGFALANPRHFTVTATGTGSGTITSLPGGLNCVYSGTATSGTCETDFADGA
                     EVTLTAAAAVGTGFNTWSDDCASSAGATSCTVTMSADRTAGAEFVSVSFGGFMASTSS
                     ATTGL"
BASE COUNT          316 a          841 c          742 g          364 t
ORIGIN      
        1 tgctctcccg caccttggcg atgccgaagt cggtgacgat cgcgttgccg tcctcatcca
       61 tcaggatgtt gcccggcttc acatcccggt ggatcacgcc gcgccggtga ccgtacgcca
      121 gcgcgctgcc cacctgatac aggatcgcct gcaccaccgg caccggcagc cgcccgccat
      181 ccttcaccac cagctcgagc gagcgccccg cgatcagctt catcacgaag aagtgcagcc
      241 ccgccatctg gcggaccgcg tggatcgtga tgatgtgggg gtgattcagg ttggcgaccg
      301 tgatggcttc ctgcttgaac cgctccacca tcccggggcc catcaggagt ccgggggaca
      361 tcaccttgat cgcgaccttg cgattgaggg cgatgtcgtg ggcgaggtac accgccgcca
      421 tgccgccccg gccgagctcg cgcttgatct ggaactcgcc cagcgtggcc ttgcggagcc
      481 gctccaggac ttcgtcccag ggcgagctct ccggctcgat catccccggg gtgatggtgg
      541 cgccgtcctg ggagctgccg cagtgcccgc agaagcggtc gccgtcggcc accccaccgc
      601 cgcaggtggg gcaggcatgg gtccgggtgc cgcagtgggg acacgccggc tcgccctcgt
      661 gccagggctc gccgcagcgg gggcaactcg tcatggcggg catgtcgttc aaacatgttt
      721 gcgccgccgc aagctgcgca agcgcccacg cttacttgac ggggtctccc gcggatggta
      781 acgtcggtcc gttcgccaaa cagcacaggt ctgcgcctga cgtccggcac gtgcgggtca
      841 cccgttcgcg cggtgcggag cagtccgctg gtgtgcgcca ctcctcggtc ttcccatcac
      901 cgtatgttcg gaggcgccgt gctcctcttc gcgtcgcgtc gtccgttcgc gctggccggc
      961 gtcctgctcg cgctctccgc aggcgccgct cgcgcgcaaa cctccatcga gatcaccccc
     1021 ttcctcgcca gcttctacgc cctgagcagc gtgagtgagc agaccaacat cccgctcacc
     1081 gacttccagg gcagtccgcc gggtgacgtg atccgggagc agcgggacgg ccccgccttc
     1141 ggcgtgcggg tcagcttccc ggtcaccggg gtgatccggg ccgaggggga ggtggcctac
     1201 gccctgagcg acggcagcca gaccgcccgg ccgcgggact tcccggaagc ggggcttggc
     1261 accacctcga atgcgcacgt catcctggcg agcgcccgcg cggtgttccg gccccggcgg
     1321 cagaacttct tcgggctggc cggcctgggc gtggtcgccc ggggcggcac cttctgggac
     1381 aacgcagacc agagcgcgcg gctggccggg gtggtcggct tcggcgtgcg cgcggccgtc
     1441 agcccgcagc tgagcctcac cttcacggcg gaagcgtacc tctacagctt caactacagc
     1501 tccagcaacg ttcccaactc cgattccaag ttccagcagg atatcgtcgt ttcggtcggc
     1561 gtgccgatcg gcgcgcgctg agggggtggc acctatgacg cgtcggctat tccggacctc
     1621 gctgctgctc ggcctcctgt tcggctgcag cgaccagggc ccgcaggtcc cgctcctctt
     1681 cgtcaagccg ccgaccggca gcaacggcgc ggggactatc accagctccc ccggcggtat
     1741 cagctgcacc atctcgaacc agaccagcgt gggggcctgc tcggccaact tcgagtccgg
     1801 cgcggcggtc accctcaccg ccagcccggc cgcgggctcc accttctccg gatggggcgg
     1861 cgagtgcgac ggcaccgatc ccacctgcgc ggtcaccctc gacgccaacg cggacgtgac
     1921 cgccgggttc gccctggcca acccgcggca cttcaccgtc accgccaccg ggacggggag
     1981 cgggacgatc accagcctcc ccggcgggct caattgcgtc tacagcggga cggccacctc
     2041 cggcacctgc gagaccgatt tcgccgatgg cgcggaggtc acgttgaccg cagccgccgc
     2101 cgtgggcacc ggcttcaaca cctggagcga cgattgcgcc agctctgccg gggcgacctc
     2161 ctgcaccgtc accatgtccg ccgatcggac cgccggtgcc gagttcgtca gcgtgtcgtt
     2221 cggcggcttc atggcgtcga ccagcagcgc gaccaccgga ctg
//
LOCUS       DATIFF010001125         1756 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_298435, whole genome shotgun sequence.
ACCESSION   DATIFF010001125 DATIFF010000000
VERSION     DATIFF010001125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_298435"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..306)
                     /locus_tag="VLD58_16420"
     CDS             complement(<1..306)
                     /locus_tag="VLD58_16420"
                     /inference="COORDINATES: protein motif:HMM:NF013298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HSB55950.1"
                     /translation="MTAKIPVTVLGATGTVGQKFVRLLEDHPWFEIASVAASDQSAGR
                     LYGDIVRWRESTPLPPRVAAMTVQRAVPGIPGRIAFSAIEAEIAGEVEQSFAMAGVFV
                     "
     gene            complement(420..1442)
                     /locus_tag="VLD58_16425"
     CDS             complement(420..1442)
                     /locus_tag="VLD58_16425"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HSB55951.1"
                     /translation="MNADTLDPIELTRQLVRLETPTGHEGPAVAFLADALTRLGYQVT
                     RQPVSPGRDNVYAWRETPELVFSTHLDCVPPYVALREDEANLYGRGTCDAKGLAAAMV
                     AAAERLAARGERRIGLLFVVGEENGSDGAERANELMPKGRFLVNGEPTENRLSLGQKG
                     SLKVVLESQGRAAHSGYPELGRSAIHPLLDTLERIRRLPLPTDPMLGSGTLNVGIIQG
                     GVAPNVMAPSARAELLFRLVGPSDELRRQVAAQAADGVVVTFPTELPYFKNRAAAPSG
                     WDTTVVSYASDLAFYSAWGEGYQLGPGTIRVAHTSEEQIGKAELLRGVELYVKLASDL
                     LSRPRT"
BASE COUNT          269 a          612 c          591 g          284 t
ORIGIN      
        1 cacgaagacg ccggccatgg cgaaggactg ttccacttcg ccggcgatct ccgcctcgat
       61 ggcggagaag gcgatgcggc cggggatgcc cggcacggcg cgctggaccg tcatggcggc
      121 cacccgcggg gggagcgggg tcgactcccg ccagcgcacg atgtcaccgt acagccggcc
      181 ggcgctctgg tccgaggccg ccaccgaggc gatctcgaac caggggtgat cctccagcag
      241 gcgaacgaat ttctggccga cggtgccggt ggcgccgagg acggtgacgg gaatcttcgc
      301 ggtcatgcct tctcctgtag aaccctgcgc gtttcggtga accctgctgc gcgattgtgg
      361 tgtcggttgt ggcccatccc gccctgatat tccccctatg gggggcggag tcctcagggt
      421 caggtccggg ggcgcgacag caggtcgctc gccagcttca cgtacaactc taccccccgc
      481 agcaactcgg ccttcccgat ctgttcctcg ctggtgtgcg ccacccggat cgtgcccggc
      541 cccagctgat agccctcgcc ccacgccgag tagaacgcga ggtcgctcgc gtagctcacc
      601 accgtggtgt cccacccgct cggcgccgcc gcccggttct tgaagtacgg cagctcggtg
      661 gggaatgtga ccaccacccc atccgccgcc tgggccgcca cctggcgtct caactcgtcc
      721 gacggaccca ccagccggaa caacagctcg gcccgcgccg acggggccat cacgttgggc
      781 gccacgcccc cctggatgat gccgacattg agcgtgccgc tccccagcat cggatcggtg
      841 gggagtggca gccgccggat ccgctccagc gtgtcgagca gcgggtgaat cgccgagcgt
      901 cccagctcgg gatagccgga gtgggccgcg cgtccctggc tctcgagcac caccttgagg
      961 cttcccttct gccccaggct gagccggttc tcggtcggct cgccattgac gaggaatcgt
     1021 cccttgggca tgagctcatt ggcccgctcg gcgccatcgg acccgttctc ctcgcccacc
     1081 acgaacagga gcccgatccg acgttcgccg cgggcggcga gccgctcggc cgcggccacc
     1141 atcgccgcag ccaggccctt ggcgtcgcag gtgccccggc cgtacaggtt cgcctcgtcc
     1201 tcccggagcg ccacgtaggg tgggacgcag tcgagatggg tcgagaacac cagttcgggg
     1261 gtttcccgcc aggcgtaaac gttgtctcgg ccggggctca ccggctggcg tgtcacctgg
     1321 tagccgaggc gggtgagtgc gtcggcgaga aaggccacgg ccggaccctc gtggccggtc
     1381 ggggtttcca gccggaccag ttgccgggtc agctcgatgg gatccagggt gtcagcgttc
     1441 atgtgtccag gtggtggcta tacataaaaa tgcgccccgc cgtttctctc ggcggggcgc
     1501 gtcagtcagg tcagggacaa actcagactg gccgtcgctc gccggagacg gaggtggtgg
     1561 acttcgtgcg ctggctcacg cgcccgggag cggcaacagt cgaatgcata aaaataaatt
     1621 atcgggctcg ccatcggacc gcaagtccct agcctcgccc gaaggcgccc ttgatgtcgg
     1681 gccgagtcag atagtagaga atggcgccgc tcaccagcaa cccgagccat cgttccgaca
     1741 ggcgggccgg gccgag
//
LOCUS       DATIFF010001126         1013 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_450132, whole genome shotgun sequence.
ACCESSION   DATIFF010001126 DATIFF010000000
VERSION     DATIFF010001126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_450132"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1013)
                     /locus_tag="VLD58_16430"
     CDS             complement(<1..>1013)
                     /locus_tag="VLD58_16430"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HSB55952.1"
                     /translation="VTALVARQGVVVGRFSFGDAVREPERRPIGTDTLFAVASVTKPF
                     TATAIMQLVERGTLSIDQPVRELIPEFAGPGKENITLRHFLTHTSGLPEYAEDDEEIR
                     RHRRGLDAFVRSYCRGRLLFPPGSQWSYSNFGFGLAGEIVARYGGQGYHEFVTDRILA
                     PLGMRDSYLQPAESAWDRIAWVWLPGEPPTAHERYNSPYFRRLGIPWGGLYATPEDLA
                     VFAQTFLQGGVYEGRRILGATAVREMTRNQLSESIRDTSGVARWRTASWGIGWDVKGN
                     KAPHHSGALTSPATFGHTGSSGSMLWADPALDLVCVMIGTRLAESGWVDGPLPRRALF
                     SNA"
BASE COUNT          171 a          350 c          344 g          148 t
ORIGIN      
        1 cggcgttgga gaacagggcc cgccggggca ggggtccgtc cacccaaccg ctctcggcca
       61 accgcgtgcc gatcatcacg cacacgagat cgagagcggg atccgcccac agcatggagc
      121 ccgacgagcc ggtgtggccg aaggtggcgg gcgacgtgag cgcaccgctg tgatggggcg
      181 ctttgttccc cttcacgtcc cagccgatcc cccagctcgc cgtgcgccag cgggccacgc
      241 ccgaggtgtc gcgaatcgat tcgctcagct ggttccgggt catctcgcga accgccgtcg
      301 cgccgagtat ccggcgtccc tcgtacacac caccctggag gaatgtctgg gcaaagaccg
      361 ccagatcctc cggggtcgcg tacagaccgc cccacgggat tccgagccgc cggaagtagg
      421 gagagttgta gcgctcgtgg gcggtgggcg gctcgccggg aagccagacc caggcgatac
      481 ggtcccaggc cgactccgcc ggctggagat agctgtcgcg catccccagg ggagccaaga
      541 tcctgtccgt cacgaactcg tggtagccct ggccgccgta tcgcgcgacg atctcgccgg
      601 ccaggccgaa gccgaagttg ctgtaggacc actgggaccc tggcgggaag agcagtcggc
      661 cgcggcaata ggatcggacg aacgcatcca ggccgcgccg gtgccggcgg atctcttcgt
      721 catcctccgc gtactcgggc agacccgagg tatgcgtgag gaaatgccgg agggtgatgt
      781 tctccttgcc cgggccggcg aactccggga taagctcgcg gaccggttga tcgatggaca
      841 gcgttccgcg ctcgaccagc tgcatgatcg cggtcgccgt gaacggcttc gtcaccgaag
      901 ccacagcgaa gagggtgtcg gttccaatcg ggcgccgctc cggttctcgc acggcgtcgc
      961 cgaacgagaa ccggccgacc accacgccct gccgcgccac cagcgccgtg act
//
LOCUS       DATIFF010001127         6567 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_759036, whole genome shotgun sequence.
ACCESSION   DATIFF010001127 DATIFF010000000
VERSION     DATIFF010001127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6567
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_759036"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..2396)
                     /locus_tag="VLD58_16435"
     CDS             complement(81..2396)
                     /locus_tag="VLD58_16435"
                     /inference="COORDINATES: protein motif:HMM:NF024754.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HSB55953.1"
                     /translation="MSSDRTPLIGLESLNPAQREAVEHVEGPLLVVAGAGSGKTRVLT
                     MRIARLIDHTGVPPYRIFAVTFTNKAAGEMKERVGRLLGQDPSGLWIGTFHSLSARLL
                     RREAEALGFSRQFTIYDEDDRLSLIKRLMDQQGHSTKLFPPRMIQSMISGAKNRMQSP
                     DQLAEASTFDRPGQVAAAVYRALGPALKSANAMDFDDLMLHPLTLFRERPDRLEFYQR
                     RFAFLLVDEFQDTNMAQYQLVKALGAHGNVCAVGDDDQSIYGWRGADVRNMQSFRQDF
                     PNPTLVRLEDNYRSTQVVLDAANAVIAENKGRIGKTLRTRRQGGEKITVVASADERDE
                     AEWVVKEFRARQAKGDWTYQEMAVLYRTNSQSRALEEAFRRSGVPYRIIGAISFYDRR
                     EVKDLLAYLRLVANPQDDEAFLRAVTVPKRGLGESGLAMLAEAAAKWGKSLLDASEAA
                     EMVQGLRPGVREALRKFATLIKDLRERSQTWTPAQIIEQVISAIDYEQVLLAEGPEGM
                     DRWENVRELVASAADWSEVVAPDEEETSTPLERFLAEAALLSANDNIQGTGEGVTLMT
                     LHTAKGLEWPVVALTGLEDGLFPLARAEEQPEGVEEERRLCYVGITRAKDKLYVTWAR
                     ARRRGGQLMPGRASRFLTALPPGVIDEKRTSSMWVPDWGGQAAKRSGGPADARSGQWS
                     RGGGRNFYDDDLGPPGRPAALPPEEVSQDSPRYVKGERVRHRRFGGGVIQGLTGTGKD
                     LKVSVRFDDEEVGVKQLLVAYAGLEREMESA"
     gene            complement(2386..3543)
                     /locus_tag="VLD58_16440"
     CDS             complement(2386..3543)
                     /locus_tag="VLD58_16440"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSB55954.1"
                     /translation="MRKRRLRRYAPALVVLLVALLAGLSAGSGWIVVRHFSGDALSIS
                     RLYSGVFAGLNDPREGGAVDALLRLGEQVRQLGIPLVVTDPEGKVTAAANLPFEASLE
                     DPRVRAYAAELDRRNPPITEQAFGTLHYGPVPAQRQLTALAVLQIAILVTIVAVGVSA
                     WRNAMGAQRDRLWVAMAREAAHQMGTPLMSLQGWIEQLRSRAAPPPRLAEHLEADAER
                     LERVAQRFERIGHTIRREPIGAGALASKVADYFRPRLPTRVNRINIRVEAPATDPVVL
                     GDPILLEWAMESLVKNAIDALQGREGTITLRVATEADYTAIRVADDGPGVPGELRRTI
                     FDPGITTKSSGWGIGLALARRVVEDSHGGELVLEQTDTGASFLIRIPTHEQ"
     gene            complement(3536..4819)
                     /gene="serS"
                     /locus_tag="VLD58_16445"
     CDS             complement(3536..4819)
                     /gene="serS"
                     /locus_tag="VLD58_16445"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003218092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HSB55955.1"
                     /translation="MIDIKLLRQDAEQVRSALARRLDPALDATLERLAEFDRRRREAL
                     VRTEALKARRNAATEEVARRKKARENADDLLAELKLSSDEVKQLDAEVRAIEAELDLV
                     LMTVPNLPLPEVPDGDASGNLVVKQVGEIPKFGFTPKPHWELGAALGLFDLPRGAKIA
                     GSGFPLFTGAGARLVRALKNFMLDLHGREHGYEEIVPPLLVNRTTMTGTGQLPKFEEE
                     LYLATQDDLFLLPTAEVPVTNIYRDDILDGARLPLGMCAFTPCFRREAGAAGKDTRGL
                     IRVHQFDKVELVRFCRPEDSPAEHEKLTRHAETVLERLEIPYRRLALAAGDTGFASAR
                     TFDLEVWAVGVGTWLEASSSSTFTDFQARRANIRFRREPGGKPEFVHTLNASGVAFPR
                     TIIAILENNQDADGSVKLPKALVPYFGAERLVPGA"
     gene            complement(4826..5401)
                     /locus_tag="VLD58_16450"
     CDS             complement(4826..5401)
                     /locus_tag="VLD58_16450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55956.1"
                     /translation="MNRAIMGATLLVFAAVVGACSDPNALADASVTNEVDTVTLWSLS
                     HGPLTQPTAYSINARNGVRTYEAGSAFEFVFDVTPTDAPIFIPTDLLGLLGTNAIKPG
                     LKRPAAGATFDLMTKAPSNGYIVADTIPVVVGDLFYIRTSVSTCSILSVPLYGKMEVL
                     AVDTAAKTVTIQVLANQNCGYRSLNIGLPKS"
     gene            5573..5926
                     /locus_tag="VLD58_16455"
     CDS             5573..5926
                     /locus_tag="VLD58_16455"
                     /inference="COORDINATES: protein motif:HMM:NF015232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HSB55957.1"
                     /translation="MAGLRDVVQGLAARPDVDAVVVLSSDGLPIDSAGRAALDSDAIA
                     ALAATFANGARRLGEAAECSGLGGTIVEFGERLAVLRPLGQEGHLFILAARETNIGPL
                     LFELRRDASTLATLL"
     gene            5937..>6567
                     /locus_tag="VLD58_16460"
     CDS             5937..>6567
                     /locus_tag="VLD58_16460"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HSB55958.1"
                     /translation="MIWAVILAGGSGSRFWPLSTPSNPKQLLPLAGTQSTAEQAVERL
                     DGLVPRERILVVTGPALAGRLQAALDLPPNNILIEPRAASTAPALVWATWEAQRRDPA
                     AQVLSLHADWAIRESDAFRHTAAQALSTALRHKRLVTVGIVPSRPETGFGYIVPGKPL
                     DEVARTVSRFAEKPTAATALDLMASGALWNSGLFAWTGTTLIEEVKRHTD"
BASE COUNT         1003 a         2272 c         2221 g         1071 t
ORIGIN      
        1 caccagcctc ggaagatcgg tctcggccac gtccagctcc gccagcctgg ctacgtgcag
       61 cacgtcctcg cggcgaatgc tcatgcgctc tccatttccc gttccaggcc tgcgtaggcc
      121 accagcagct gcttcacgcc gacttcctcg tcatcgaacc ggaccgagac cttgagatcc
      181 ttgccggtac cggtcaaccc ctgaatcact ccgccgccga accgccggtg gcgcacccgt
      241 tcgcccttca cgtagcgggg tgagtcctgg gagacttcct cgggcggcaa ggcggcaggg
      301 cggcccggcg ggccgagatc atcatcatag aaatttcgtc ccccgccccg cgaccactgc
      361 cctgaccgcg cgtccgccgg cccgcccgac cgcttcgccg cctgcccgcc ccaatccggc
      421 acccacatcg agctggtccg cttctcgtcg atgaccccgg gtggcaacgc ggtgagaaac
      481 cgcgacgcgc gtccaggcat cagctggcca ccccggcgcc gagcccgggc ccaggtgaca
      541 tagagcttgt ccttggcgcg ggtaataccc acgtagcaga gccggcgttc ctcctctact
      601 ccttccggct gttcctcggc gcgggcgagg gggaataatc catcctccag gcccgtcagc
      661 gccaccaccg gccactcgag gcccttcgcc gtatgaaggg tcatgagggt gaccccttca
      721 ccggtgccct ggatattgtc gttcgccgac aacagcgccg cctcggccag gaaccgctcg
      781 agcggagtcg aggtctcctc ctcatccggc gccaccacct ccgaccagtc ggcggcgctg
      841 gccaccagtt cccgcacgtt ctcccaccgg tccatcccct cggggccctc ggccagcagc
      901 acctgctcgt agtcgatggc gctgatcacc tgctcgatga tctgagccgg ggtccaggtc
      961 tgggaccgct cgcggaggtc cttgatgagg gtggcaaact tccggagcgc ttccctcaca
     1021 ccgggcctga ggccctgcac catttcggct gcctcggacg cgtcgagcag cgacttgccc
     1081 catttggctg ccgcctcggc cagcatcgcc aatcccgact cgccgagacc acgtttcggc
     1141 acggtgacgg cgcggaggaa ggcctcgtcg tcctgcggat tcgcgaccag tcgaagatag
     1201 gcgaggaggt ccttcacctc gcgccggtcg tagaagctga tggctccgat gatccggtag
     1261 ggcacccccg agcggcggaa cgcctcttcc agggcgcggg actgggagtt ggtgcggtag
     1321 aggaccgcca tctcctggta ggtccagtcg cccttcgcct gccgggcgcg gaattccttc
     1381 accacccatt cggcctcgtc ccgctcatca gccgaggcga ccacagtgat cttctcgccg
     1441 ccctgccgcc gggtgcgaag ggtctttccg atccgtccct tgttctccgc gatcaccgcg
     1501 ttggcagcat cgagcacaac ctgggtggag cggtagttgt cttccagccg caccagggtg
     1561 gggttgggga aatcctggcg gaagctctgc atgttgcgca cgtcggcccc ccgccagccg
     1621 tagatcgact gatcgtcgtc gcccaccgcg cagacattgc cgtgcgcgcc cagcgccttc
     1681 accagctggt actgggccat gttggtatcc tgaaactcat cgaccaggag aaaggcgaag
     1741 cgccgctgat agaactccag ccggtcggga cgctcccgga agagagtgag cgggtggagc
     1801 atcaggtcgt cgaaatccat cgcgttggcg ctcttgagcg ccgggccgag ggcgcgatac
     1861 accgcggcgg cgacctgtcc cggccggtcg aaggtggaag cctccgccag ctggtcgggc
     1921 gactgcatcc ggttcttggc acccgagatc atcgactgga tcatccgggg cgggaagagc
     1981 ttggtcgagt gcccctgctg atccatcagc cgtttgatga gggaaagccg gtcgtcttcg
     2041 tcgtagatgg tgaactggcg ggagaagccg agcgcttcgg cctcgcggcg gaggagccgg
     2101 gccgagagcg agtggaaggt gccgatccac aggccggagg gatcctgtcc cagcaggcgc
     2161 cccacccgtt ccttcatttc gccggcggcc ttgttggtga aggtgaccgc gaagatccgg
     2221 tagggcggca cgccggtgtg atcgatgagc cgggcgatcc gcatcgtgag gacgcgggtc
     2281 ttccccgagc cggcgccggc cacgaccagg agcggtccct cgacgtgctc gaccgcctcc
     2341 cgctgggcgg gattcaggct ttcgaggccg atcaggggcg tgcggtcact gctcatgggt
     2401 ggggatccgt atcaggaacg atgcaccggt gtcggtctgt tcgagtacca attcgccgcc
     2461 gtgggagtct tccacaacgc gtcgcgccag ggccaggccg atgccccagc cgctcgactt
     2521 ggtggtgatg cccgggtcga agatggtccg gcgcagttcg cccggcacac ccggtccgtc
     2581 atccgctacc cggatggcgg tgtaatcggc ctcggtcgcc acccggaggg taatggtgcc
     2641 ttcgcgtccc tgcagggcat cgatcgcgtt cttgaccagc gattccatcg cccattcgag
     2701 caggatggga tcgcccagca ccacggggtc ggtggccgga gcttcgaccc ggatgttgat
     2761 gcggttcacc cgggtcggaa ggcgcggccg gaaatagtcg gccaccttgg acgcgagcgc
     2821 ccctgccccg atgggctccc gccggatggt gtgtccgatc cgttcgaagc gctgcgccac
     2881 ccgctccagc cgctcggcgt cggcctcgag atgttccgcc agccggggcg gtggcgcggc
     2941 gcgggagcgg agctgttcga tccacccctg gaggctcatg agcggcgtgc ccatctgatg
     3001 ggccgcttcc cgcgccatcg caacccagag ccggtcgcgc tgcgccccca tcgcgttgcg
     3061 ccaggccgag acgcccaccg cgacgatggt gacgagaatc gcgatctgga gcaccgccag
     3121 cgccgtcagc tgccgctggg ccggcaccgg gccgtagtgc agcgtgccga aggcctgctc
     3181 cgtgatgggc ggattgcgcc ggtcgagttc cgccgcgtag gcccgtaccc tgggatcctc
     3241 gagcgaggcc tcgaacggga gattggccgc cgcagtcacc ttcccctcgg gatcggtcac
     3301 caccagcgga atcccaagct gccggacctg ttcgcccagg cggagcaacg cgtccaccgc
     3361 gcccccctcg cgggggtcgt tcagtccggc gaacactccg gagtagagcc tgctgatcga
     3421 gagagcgtcg ccggagaagt ggcggaccac gatccagccg gaaccggcgg agagccccgc
     3481 gaggagcgcc accaggagaa cgaccagcgc cggcgcgtac cggcgcaggc ggcgcttacg
     3541 cacccggcac gagacgctcg gcgccgaaat acggcaccag cgccttcggc agcttcaccg
     3601 agccgtccgc gtcctggttg ttctccagaa tggcgatgat ggtccggggg aaggccacac
     3661 cggaggcatt gagggtgtgg acgaactccg gcttgccgcc gggctcgcgc cggaaccgga
     3721 tgttggcgcg gcgggcctgg aagtcggtga aggtgctgga gctcgacgcc tcgagccagg
     3781 tcccgacgcc caccgcccag acctcgagat cgaaggtcct ggcgctggcg aagccggtgt
     3841 cgcccgcggc aagcgcgagc cggcgataag gaatctcgag ccgctccagc acggtctcgg
     3901 cgtgacgggt gagcttctcg tgttccgcgg ggctgtcttc cggccggcag aagcggacca
     3961 gctcgacctt gtcgaactga tggacccgga tgagcccgcg ggtatccttc cccgccgcgc
     4021 cggcctcgcg ccggaaacag ggcgtgaagg cgcacatccc gagcggcagc ctggcgccgt
     4081 cgaggatgtc gtcccggtag atattggtga ccggaacctc ggccgtcggc agcaggaaga
     4141 ggtcgtcctg ggtggcgagg tacagctcct cttcgaactt gggaagctgg ccggtgccgg
     4201 tcatggtggt gcgattcacc agcagcggcg gcacgatctc ctcatagccg tgctcacggc
     4261 catggagatc gagcatgaaa ttcttgagtg cgcgcaccag ccgggcgccg gcgccggtga
     4321 agagcgggaa ccccgagccg gcgatcttgg cgccccgcgg cagatcgaag agcccgagcg
     4381 cggcgcccag ctcccagtgc ggcttgggcg tgaagccgaa tttcggaatc tcgcccacct
     4441 gcttcaccac cagattgccg gacgcgtcgc catccggcac ctccggaagc ggcagattcg
     4501 gcaccgtcat caggaccagg tcgagctctg cctcgatggc gcgcacctcg gcgtcgagct
     4561 gtttcacctc gtcgctcgag agcttgagct cggccagcag gtcgtcggcg ttctccctgg
     4621 ccttcttccg gcgggcgact tcctcggtgg cggcgttgcg gcgggccttg agggcttcgg
     4681 tgcggaccag cgcctcacgc cggcggcggt cgaactccgc caggcgctcc agggtggcgt
     4741 ccaatgcggg gtcgagccgc cgggccagcg ccgagcggac ctgctcggcg tcctgccgga
     4801 ggagcttgat gtcgatcacg gctaactaac ttttcgggag cccgatattg agactgcgat
     4861 agccgcagtt ctgattggcg agcacctgga tggtgaccgt cttggccgcg gtgtcgaccg
     4921 cgagcacttc catcttgccg tacagcggca cgctcaggat cgagcaggtg gagacgctgg
     4981 tccggatgta gaagaggtcg cccaccacca cgggaatggt gtcggccacg atgtagccgt
     5041 tggacggcgc cttcgtcatc aggtcgaagg tggcgccggc cgcggggcgc ttgagcccgg
     5101 gcttgatcgc gttggtgccg agcaggccga gcagatcggt ggggatgaag atcggcgcgt
     5161 cggtgggcgt cacgtcgaaa acgaattcga aagcgctccc ggcctcgtag gtccgcaccc
     5221 cgttacgggc gttgatcgag tacgcggtgg gctgggtgag cggcccgtgg ctcagggacc
     5281 agagcgtgac ggtatccacc tcgttggtga cagaggcgtc ggcgagggcg ttgggatcgc
     5341 tgcaggcgcc gaccactgcg gcaaagacga gcagggtggc acccatgatg gcacggttca
     5401 ttgggggaaa gtagggaccg ggttgagacc ggtcaaccca cagtgattcc atcacttcga
     5461 cgcctcgccc cgaaacgccg ccgggaccct ctcccgggcg cttttcagct tgattcgggg
     5521 cccgcttctg tctactatgc gctgtgcggt tccccccatc ctgagaggcg acgtggccgg
     5581 cctgcgcgac gtagtccagg gccttgcggc ccgcccggac gtggacgcgg tggtggtgct
     5641 gagcagcgac ggactcccga tcgacagcgc gggccgggcg gcgctcgact ccgacgcgat
     5701 cgccgccctc gcggccacct tcgccaatgg cgcccgtcgg ctgggcgaag ccgccgaatg
     5761 ctccggcctg ggcggcacga tcgtcgaatt cggcgagcgc ctcgcggtgc tccgacccct
     5821 cggtcaggaa ggccatctct tcatcctggc cgcacgcgaa accaacatcg gtcccctcct
     5881 cttcgagcta cggcgggacg cgtcgaccct cgcgaccctt ctctgatcgc aggcacatga
     5941 tctgggctgt cattctcgcg ggcggatccg ggagccgctt ctggccgctc tccaccccct
     6001 cgaacccgaa gcagttgctt cccctcgcgg gcacccaatc caccgccgag caggcggtgg
     6061 agcgactcga cgggctggtg ccgcgtgagc ggatcctcgt ggtcaccgga ccggcactgg
     6121 ccggccggct gcaggcggcg ctcgacctcc ctcccaacaa catcctgatc gaaccgcggg
     6181 cggcctcgac tgcgccggct ctggtctggg ccacctggga ggcacagcgc cgcgacccgg
     6241 cggcccaggt gctctccctt cacgccgatt gggccatccg ggagtcggac gccttccgtc
     6301 ataccgcggc tcaggccctc tcgacggcgc tccggcacaa gcggctggtg acggtaggca
     6361 tcgtgccgtc gcgcccggag accgggttcg gctacatcgt gccggggaag ccgctcgatg
     6421 aagtcgcccg caccgtctcc cggttcgcgg agaagcccac cgccgccacg gcgctcgacc
     6481 tcatggcgtc gggcgccctc tggaacagcg gcctgtttgc ctggaccggg acgacgctga
     6541 tcgaggaagt gaagcgccac accgacg
//
LOCUS       DATIFF010001128         2565 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1221937, whole genome shotgun sequence.
ACCESSION   DATIFF010001128 DATIFF010000000
VERSION     DATIFF010001128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2565
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1221937"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..893)
                     /gene="purM"
                     /locus_tag="VLD58_16465"
     CDS             complement(<1..893)
                     /gene="purM"
                     /locus_tag="VLD58_16465"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HSB55959.1"
                     /translation="MTREYAAAGVDLEGAEAQKARIGEAVATTRTALSVGKVGAFGGM
                     VRIPPGMRKPALVLSTDGVGTKVLVALQAHRYDTVGEDLVNHSVNDILVHGATPVAFM
                     DYIAGAGLGIEQIAGIVEGIARGCRAHGMALAGGETAQMPGLYREGTFDLAGTIVGVV
                     EEDAALHGDAVRPGDQLLGYASTGLHTNGYTLARRIVFDRLGLTLDSRLGDTGASVAE
                     ALLAVHRSYFRSVRPVLDRVHGLAHITGGGIPGNLVRILPEGCEAVVDPTSWEIPPLF
                     TTLQRAGQISTEEMRDVFNLGV"
     gene            complement(890..1810)
                     /locus_tag="VLD58_16470"
     CDS             complement(890..1810)
                     /locus_tag="VLD58_16470"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HSB55960.1"
                     /translation="MTLLVVGSVALDSIFTPFGETADALGGSAVYFSVAGSLLHPVQV
                     VGVVGRDYPVSELEQLARRGIDWSGVERAEGESFRWKGKYSYDLQSRETLETRLGVFA
                     HFQPKIPAAFRSAEYVFLGNIDPDLQLAVLTQVQRPKLVVCDTMNYWIQGKKPALLDL
                     LARVDVLMVNDSEARELSGDWNIHRAGRWILARGPKRVVIKQGEYGALLIEPTRTFYV
                     PAFPLETVFDPTGAGDAFAGGFMAYLARTRSLSEDNIRRAMVYGAAMGSYAVEQFGIR
                     GFDRIALTDVETRVRAFQDLTHVQLAEALP"
     gene            complement(1815..>2565)
                     /gene="argS"
                     /locus_tag="VLD58_16475"
     CDS             complement(1815..>2565)
                     /gene="argS"
                     /locus_tag="VLD58_16475"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF017555.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HSB55961.1"
                     /translation="KGDGSLTYLVPDIAYHMDKHDRGFDRAIDVWGADHHGYIPRMRA
                     VLLALGYPPEFFSVELVQLVKVVRGGEEVKMSKRAGEFITLRDLFEEVGVDAARYFFL
                     MRKGASPLDFEVDLAKKQTDDNPVFYVQMAHARLSGIFRTAERSPESVEGAVDLAALP
                     APHDTELLKKLVTFPELVEKAAREHEPHRITVFLHELATVVHGWYHHTRAVGAPEGPA
                     TEQARLLLARAARTVLANALTLLGVSAPDRM"
BASE COUNT          377 a          920 c          881 g          387 t
ORIGIN      
        1 acgccgaggt tgaacacgtc ccgcatctcc tcggtgctga tctgccccgc gcgctgcagg
       61 gtggtgaaca gcgggggaat ctcccagctg gtcgggtcca ccacggcctc acagccctcg
      121 ggcagtatcc gcaccaggtt cccggggatg ccgccgccgg tgatgtgcgc caggccatgc
      181 acccggtcga gcaccggccg cacgctccgg aagtagctcc ggtgcaccgc caggagcgct
      241 tcggcgacgc tggcgccggt gtcgccgagc cggctgtcca gcgtcagccc caggcggtcg
      301 aacacgatcc ggcgggccag ggtgtacccg ttggtgtgca gtccggtgga ggcgtatccc
      361 agcagctggt cgcccggccg cacggcgtcg ccatggagcg cggcatcctc ctccaccacc
      421 cccacgatgg tgccggccag gtcgaaggtc ccctcgcgat acaggccggg catctgcgcc
      481 gtctcgccgc cggccagggc catgccgtgg gccctgcatc cccgggcgat gccctcgacg
      541 atgcccgcga tctgttcgat gccgagcccg gcgcccgcga tgtagtccat gaatgcgacc
      601 ggggtggcgc catgcaccag gatatcgttg acgctgtggt tgaccaggtc ctcgccgacc
      661 gtgtcgtacc ggtgggcctg gagcgccacc agcaccttgg tgccgacccc gtcggtgctg
      721 agcaccagcg ccggcttccg catccccggc gggatccgca ccatcccccc gaaggcgccg
      781 accttgccga ccgagagggc ggtacgggtt gtggccaccg cctcgccgat ccgggccttc
      841 tgcgcctcgg cgccctcgag gtccacgccg gcggcggcgt actcccgggt cacggcagcg
      901 cctcggccag ctgcacgtgg gtgaggtcct ggaacgcccg gacccgggtc tcgacgtcgg
      961 tcagcgcgat ccggtcgaac cctcggatcc cgaactgctc caccgcgtag gaacccattg
     1021 cggcgccgta caccatcgcc cgccggatgt tgtcctcgga gagcgaccgg gtgcgcgcca
     1081 ggtaggccat gaagccgccg gcgaaggcgt cgccggcgcc ggtcgggtcg aacacggtct
     1141 ccagcgggaa cgccggcacg tagaaggtgc gggtcggctc gatcagaagc gctccgtact
     1201 cgccctgctt gatcaccacc cgcttgggac cgcgggccag gatccaccgt cccgcgcggt
     1261 ggatgttcca gtcgccgctc agctcccggg cctcgctgtc gttcaccatc aacacatcca
     1321 cccgcgccag gaggtcgagc agcgccggct tcttgccctg gatccagtag ttcatggtgt
     1381 cgcacaccac cagcttcggc cgctggacct gggtgaggac tgccagctgg agatcggggt
     1441 cgatgttgcc gaggaacacg tactcggccg agcggaaggc cgcggggatc ttgggctgga
     1501 agtgggcgaa cacgccgagc cgggtctcca gcgtctcccg actctggagg tcgtagctgt
     1561 acttgccctt ccaccggaag ctctcgccct cggcgcgctc gacacccgac cagtcgattc
     1621 cccgccgggc gagctgctcc agctcggaga ccgggtagtc gcgccccacc acgccgacca
     1681 cctgcaccgg gtgcagcagc gagccggcca cgctgaagta caccgccgac ccgccaagcg
     1741 cgtcggcggt ctccccgaaa ggggtgaaga tcgagtcgag ggcgacgctg cccaccacga
     1801 ggagagtcat cgggtcacat ccggtcgggg gcggagacgc ccagcagggt gagggcgttg
     1861 gccagaacgg tgcgggccgc tcgggcgagc agcagccgcg cctgctcggt ggccggcccc
     1921 tccggcgccc cgaccgcgcg ggtgtgatgg taccagccgt ggaccacggt ggcgagctcg
     1981 tgcaggaaca cggtgatccg gtgcggctca tgctcccgcg cggccttctc gaccagttcg
     2041 gggaaggtca ccagcttctt gagcagctcg gtgtcatgcg gcgccggaag cgcagccagg
     2101 tccaccgcgc cctcgaccga ctccgggctc cgctcggcgg tgcggaagat gccgctcagc
     2161 cgcgcgtggg ccatctggac gtagaagacc gggttgtcgt cggtctgctt cttggccagg
     2221 tcgacctcga agtcgagtgg gctggcgccc ttccgcatga ggaagaagta gcgtgcggca
     2281 tcgaccccga cctcctcgaa caggtcgcgc agggtgatga actcgccggc ccgcttggac
     2341 atcttcacct cttccccgcc ccgcaccacc ttcaccagct gtaccagctc gaccgagaag
     2401 aactcgggcg ggtagcccag cgcgaggagg acggcccgca tccgggggat gtagccgtgg
     2461 tggtccgcgc cccagacgtc gatggcgcgg tcgaagccgc gatcgtgctt gtccatgtgg
     2521 taggcgatgt cgggcaccag gtacgtgagc gagccgtcgc ctttc
//
LOCUS       DATIFF010001129         6048 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2297480, whole genome shotgun sequence.
ACCESSION   DATIFF010001129 DATIFF010000000
VERSION     DATIFF010001129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6048
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2297480"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..220)
                     /locus_tag="VLD58_16480"
     CDS             complement(<1..220)
                     /locus_tag="VLD58_16480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55962.1"
                     /translation="MLPEDRGPNRRRWVAIAISLAVHSLLFLVVIEGRLPELPLRHSL
                     LIIPLPEPEPSPVNVTPYYVPLQQRGQGT"
     gene            complement(210..1400)
                     /locus_tag="VLD58_16485"
     CDS             complement(210..1400)
                     /locus_tag="VLD58_16485"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSB55963.1"
                     /translation="MPSSRLNRLPGYPLAQLPARKRALIARGVDVIDLGAGDADYPPP
                     AEVIEVMRQAVGETPLSKYGFQQGLPDFRRAAVEWMQRRFGITFDPVREMLPLLGSKE
                     GLSHFPHAIIEPGDAVVVPEPGYQAYIGGTILAGGEPVIYPLTPRTNYLVELEELPAA
                     TLARVRLVFLNYPNNPTSAIAPREYLERTVAFCRAHGITIAYDNPYCDLTFDGYRAPS
                     IFEIDGAREISVEFFSLSKSFSMTGWRLGWAAGPEPLITALTRVKSYVDTGPWLAIQR
                     AGAYALDHAERLIPPNVAELARRRDAGVGALRSAGFTLESPRATMYLWVGLPEGLASS
                     AFADDALDEFGVVVLPGSAFGPGGEGFFRIALTVGPERLREACGRLGACLERFRARSG
                     AGAA"
     gene            complement(1416..2027)
                     /locus_tag="VLD58_16490"
     CDS             complement(1416..2027)
                     /locus_tag="VLD58_16490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HSB55964.1"
                     /translation="MTPVKPGKIIGVGRNYRAHAEELGNPMPAQPIIFLKPTSAIIAP
                     GETIILPPDSNKVEQEAEIGIVVLERLRNVTRDEAEKARIGFTCVNDVTARDLQKVDG
                     QWSRAKGYDTFCPVGPVVQEGLDWRTLEVIGRVNGKDVQRGKASDMAFDIPTLIVFIS
                     RVMTLEPGDVIATGTPAGTTALKAGDVTEVEIPGVGVLKNPVA"
     gene            complement(2024..4540)
                     /locus_tag="VLD58_16495"
     CDS             complement(2024..4540)
                     /locus_tag="VLD58_16495"
                     /inference="COORDINATES: protein motif:HMM:NF024703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helicase C-terminal domain-containing protein"
                     /protein_id="HSB55965.1"
                     /translation="MADGSTNRLTPDTQAYLREQISAAGGREVSFVATVAADGTLTAA
                     RVVARGTVDRVLALPGVAERGEMLLHNHPSGLLEPSIPDLNVAARLHDGGVGFGIIDN
                     AGAELYVVVEVPRAKPDVKIDPLSVVDQLGEHGPIARALGQYEDRPSQRDMAAYIADA
                     YNDGGVVLLEAGTGVGKSFAYLVPALAWAAATGERTVVSTNTINLQEQLVGKDLPLLH
                     VALATADRAPTFALLKGWRNYLCLSRLHQAVGAQRSLLEPDKYDELNGLLEWASRTPD
                     GTLADLPVTPSSEVWDEVSAEADLCSRLQCPHFDACFLFKARRRAAEADVVVVNHHLL
                     AADLAVRQASDNWREAAVLPPYDRLILDEAHHLEDVAASHLGAQVTSRGIRRLLGRFE
                     RNGKGLLPTLASDLAATGDLLSRASLDLLRDRLLPAVLDARRAADQMLMRLHTRLEQE
                     QGGVLRLTDDFKTDAIWADGLTRELDQSLLAFRAIKESIETIADRMAGSEPTERRTQL
                     LAELRAIVRRMESVSDALNQALRPAGGGPPTVRWLERTGPRGQQLLLAAVPLDLAPVL
                     RELIFERVKTVTLTSATLAASGEFSFLEGRVGLSIDPCPVTERAILPSPFDYLEQCVL
                     GIPNDIPDPREDEVGHSEAVVQVVTDLAHASDGGMFVLFTSHKSLRRTASELRATVGE
                     QWPILVQGEAPRDTLLRRFRDLGRAILLGTDSFWEGVDVPGRALRALVLTKLPFKVPT
                     EPLTAARLERLAEQGQDGFMGYLLPHAALKLKQGFGRLIRTRTDVGAVVLLDKRVLTK
                     RYGPLVLSGLPRADRVTGRWSEVRTRIEDFFARHGIGANV"
     gene            complement(4684..5985)
                     /locus_tag="VLD58_16500"
     CDS             complement(4684..5985)
                     /locus_tag="VLD58_16500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55966.1"
                     /translation="MRRRDFLRHAGQMGFAGMAGGFLLRLPPIPVSTAAWLLLPMDDK
                     QGDHLKAYGVTYRVLERGGKAEWFLNYRGGAFLVPGDGGTARDAALAGVTSEPLSDGD
                     VINLRASLADGNMDAIPLEKPPKVAVYAPPNASPWDDAVTMVLNYAGIKFDKIWDGEV
                     IAKGLTRFDWLHLHHEDFTGQYSKFYLNYAGAPWLAEMVQRNQQMATQLGFPNVPADK
                     RGVAREIRAFVERGGFLFAMCTATETLDLALASENVDIAASYADGTPMDPEASRKMDW
                     SRSLAFQNAQLELSPNVPSFSDIDGHQVNSLEKRQPLGAFKLFNFSAKIDPVPTMLVQ
                     CHRDVIPDFYGLTTSFTKKTLKSSVTILADEPGAAWAKYIHGELGQGTWTFYGGHDPE
                     DPQHQIGDPATDLSLHPHSPGYRLILNNVLFPAAKKRELKT"
BASE COUNT          957 a         2013 c         2128 g          950 t
ORIGIN      
        1 cagtcccctg gccccgctgc tgcagcggga cgtagtaggg cgtaacgttg acgggcgacg
       61 gctccggctc cggaagggga atgatcagca gggaatgccg cagcgggagc tccggcagcc
      121 gcccctcgat caccaccagg aacagcagac tgtgcaccgc gaggctgatc gcgatcgcaa
      181 cccagcgacg gcggttgggg ccccggtcct caggcagcac cggcaccact ccgtgcgcgg
      241 aaccgttcga ggcaggcgcc gagccggccg cacgcctccc gcagccgctc gggacccacc
      301 gtcaaggcga tgcggaagaa gccttcgccg cccgggccaa aggccgaacc ggggaggacc
      361 accacgccga actcatcgag tgcatcgtcg gcaaaggccg aggaggcgag tccctcaggc
      421 aaacccaccc agagatacat cgtggcgcgg gggctttcga gggtgaaacc ggcgcttcgg
      481 agcgctccca ctccggcatc ccgccgccgc gccagctcgg ccacattcgg cggaatcagc
      541 cgctcggcgt gatccagcgc ataggccccg gcccgctgaa tggccagcca ggggccggtg
      601 tcgacgtagc tctttacccg ggtgagcgcg gtgatgagcg gctccggccc tgccgcccac
      661 ccgagccgcc acccggtcat cgagaagctc ttgcttaacg agaagaactc gaccgaaatc
      721 tcacgggccc cgtcgatttc gaagatgctg ggcgcccggt agccgtcgaa ggtcaagtcg
      781 cagtacgggt tgtcgtaggc gatcgtgatc ccatgagccc ggcagaaggc caccgtccgc
      841 tcgagatatt cgcgcggggc aatcgccgag gtgggattgt tcggatagtt gaggaagacc
      901 agccggaccc tggcgagggt tgccgccggg agctcttcca gctcgaccag gtagttggtc
      961 ctgggggtga gcggatagat caccggttcg cccccggcga ggatggtccc gccgatatag
     1021 gcctggtagc ctggctcggg cactaccacg gcgtcgcccg gctcgatgat cgcatgggga
     1081 aaatgcgaca gcccctcctt cgagccgagg agcgggagca tttccctgac ggggtcgaag
     1141 gtgatgccga atcgccgctg catccactcg actgcggccc gccggaaatc ggggagcccc
     1201 tgctggaagc cgtacttgct gagcggcgtc tcgcctaccg cctgccgcat cacctcgatc
     1261 acctcggccg gcggggggta gtccgcatcg ccggcgccga gatcgatgac atccacgccc
     1321 cgggcgatca gcgcccgctt cctggcgggg agttgggcca gtggatagcc gggaaggcgg
     1381 ttcaagcggg aggacggcat ggagagtcgc gggtatcagg ctaccgggtt cttgagcacc
     1441 ccgaccccgg ggatctcaac ttcggtcacg tcgccggcct tgagcgcggt ggtgccggcc
     1501 ggggtcccgg tcgcgatcac atcgccgggt tcgagggtca tgacccggct gatgaacacg
     1561 atcagcgtgg ggatgtcgaa cgccatgtcg ctggccttgc cgcgctggac gtccttcccg
     1621 ttgacccggc cgatcacctc cagggtgcgc cagtcgagcc cttcctgtac cacgggcccg
     1681 accgggcaga aggtgtcgta acccttggcc ctgctccact ggccgtcgac cttctggaga
     1741 tcgcgggcgg tcacatcgtt cacgcaggta aagccgatcc gcgccttctc ggcttcgtcc
     1801 cgggtgacgt tccggagccg ttccagcacc acgatcccga tctccgcctc ctgctccacc
     1861 ttgttcgagt cgggggggag gatgatggtc tcgcccgggg caatgatcgc gctggtcggc
     1921 ttgaggaaaa tgatgggctg cgccggcatc gggttgccga gctcctcggc atgggcccgg
     1981 tagttacgtc ctacgccaat gatcttgccg ggcttcaccg gggtcatacg ttggctccga
     2041 ttccgtggcg ggcgaagaag tcctcgatcc gggtacgcac ctcgctccac cgcccggtga
     2101 cccggtcggc ccgaggcaac ccgctcagca cgagcgggcc gtaccgcttg gtgagtacac
     2161 gcttgtcgag cagaaccacc gccccgacgt cggtccgggt gcggatcagc cggccaaacc
     2221 cctgcttgag cttgagggcc gcatggggaa ggagataccc catgaatccg tcctgaccct
     2281 gctcggcgag gcgctccagc cgcgcggcgg tcagtggctc cgtcggaacc ttgaaaggta
     2341 acttcgtcag aaccagggcg cggagcgcgc ggcccggcac atcgacgcct tcccagaacg
     2401 agtcggtccc caggagaatc gcccggccca ggtcacggaa ccgacggagc agcgtatcgc
     2461 gcggggcctc gccctgcacc aggatgggcc actgctcacc gacggtggcg cggagttcgc
     2521 tcgccgtacg ccggagcgat ttgtggctgg tgaagagcac gaacatcccg ccatccgagg
     2581 cgtgcgcgag gtcggtcacg acctggacca ccgcctccga gtgccccacc tcgtcttcgc
     2641 gcgggtcggg aatgtcgttg gggatcccca ggacgcactg ctccaggtag tcgaagggcg
     2701 acgggagaat ggcgcgctcg gtcaccggac aggggtcgat cgagagaccc acccggccct
     2761 cgagaaagct gaattcgccg ctggccgcga gggtggcgct ggtcagcgtc accgtcttga
     2821 cccgctcgaa gatcagctcc cggagcaccg gggcgaggtc gagcggcacc gccgcaagca
     2881 ggagctgctg tccccgcggg ccggtacgct cgagccagcg tacagtcggg gggccgccgc
     2941 ccgccggccg gagcgcctgg ttgagcgcat cggacacgct ctccatccgg cgcacgatcg
     3001 cgcggagctc ggccaggagc tgggtccggc gctcggtagg ctccgatccc gccatccggt
     3061 cggcgatggt ctcgatgctt tccttgatgg cgcggaacgc cagcagcgac tggtcgagct
     3121 cgcgggtgag tccgtcggcc cagatggcgt cggtcttgaa gtcgtcggtg aggcggagga
     3181 cgccaccctg ctcctgttcc agccgggtgt ggagccgcat gagcatctgg tcggcggccc
     3241 gtcgggcatc gagcaccgca ggaagcagcc ggtcgcggag caggtcgagg ctcgcgcggc
     3301 tcaggaggtc gccggtggcg gcgaggtcgc tggcgagggt cggaaggagc cctttcccgt
     3361 tccgctcgaa acggcccagc aggcgccgga tcccgcggct cgtcacctgc gcgccgaggt
     3421 gagaggcggc gacgtcctcg aggtgatggg cctcgtcgag gatcaggcgg tcgtagggcg
     3481 gcaggaccgc ggcctcgcgc cagttgtcgg aggcctggcg caccgcgagg tcggcggcga
     3541 gcagatggtg gttgaccacg acgacatcgg cctcggccgc gcgccgccgg gccttgaaga
     3601 ggaagcaggc atcgaagtgg ggacactgga gccgggagca gagatcggcc tcggcgctga
     3661 cttcgtccca cacttcgctg ctgggcgtta ccgggagatc ggcgagcgtg ccgtcgggtg
     3721 tgcggctggc ccactccagc agcccgttca gctcgtcgta cttgtcgggt tcgaggagcg
     3781 agcgctgggc gccgaccgcc tgatggagcc gggaaagaca gagatagttc cgccacccct
     3841 tgaggagcgc gaaggtcggc gccctatcgg cggtggcgag tgccacgtgc aggagcggca
     3901 ggtccttgcc gaccagctgt tcctgcaggt tgatggtgtt ggtgctgacg acggtgcgct
     3961 ctccggtggc ggcggcccac gcgagggccg gcaccaggta ggcgaaggac ttcccgacac
     4021 cggtccccgc ttccagcagc accaccccgc catcgttgta cgcatcggcg atgtaggccg
     4081 ccatgtcgcg ctggctgggc cggtcttcat actgacccag cgcgcgggcg atggggccgt
     4141 gctcgcccag ctgatccacc acgctgagcg ggtcgatctt cacatcgggc ttggcccgcg
     4201 gcacctccac cacgacgtac agctcggccc cggcgttgtc gatgatgccg aaacccactc
     4261 ccccatcgtg gagccgggcc gcaacgttga ggtctgggat ggagggttcg aggagcccgc
     4321 tcgggtggtt gtgcagcagc atctcgcccc gttcggccac tcccggaagg gcgaggacgc
     4381 ggtcgaccgt gccccgggca accacgcggg cggcagtaag ggtgccatcg gccgccacgg
     4441 tggccacgaa ggagacctcc cggccgccgg ccgccgagat ctgctctcgg aggtaggcct
     4501 gcgtgtcggg ggtgaggcgg ttggtggaac cgtcagccat cagcgatgcg cctggagcca
     4561 ggggtgaccg ggtacgagga gggtaagcta atgggaggaa tgagctcggc gcggggccac
     4621 aaaacgcggc caggctgaca cggatccgcc aacggctaac ggctaacggc cgatggccaa
     4681 cggctaggtc ttcagctccc gcttcttcgc cgccgggaag aggacgttgt tgaggatgag
     4741 ccggtagccc ggcgagtgcg ggtggagcga aaggtcggtc gcggggtcgc cgatctggtg
     4801 ctgcgggtcc tccgggtcgt gcccgccgta gaaggtccag gtgccctgcc ccagctcccc
     4861 gtgaatgtac ttggcccagg cggcgcccgg ctcgtctgcc aggatcgtca ccgagctctt
     4921 gagcgtcttc ttggtgaagg aggtcgtgag gccgtagaaa tcgggaatca cgtcgcgatg
     4981 gcactgcacc agcatcgtgg gcaccgggtc gatcttggcg ctgaagttga acagcttgaa
     5041 cgcgcccagc ggctgccgct tctcgaggct gttgacctgg tggccgtcga tgtcggagaa
     5101 ggacggcaca ttgggtgaga gctcgagctg cgcgttctgg aaggccagcg agcggctcca
     5161 gtccatcttg cggctcgcct ccgggtccat gggcgtgccg tcggcatagg aggccgcgat
     5221 atcgacgttc tcgctggcca gcgccaggtc gagcgtctcg gtcgcggtgc acatcgcgaa
     5281 gaggaagcct ccccgctcca cgaatgccct gatctcccgc gccacgccgc gcttgtcggc
     5341 cgggacattg gggaagccca gctgagtcgc catctgctgg ttgcgctgca ccatctccgc
     5401 cagccaggga gcgccggcgt agttgaggta gaacttggag tactggccgg tgaagtcctc
     5461 gtggtgcagg tgcagccagt cgaacctggt gagccccttc gcgatgacct cgccgtccca
     5521 gatcttgtcg aacttgatgc cggcgtagtt gagcaccatg gtgaccgcgt cgtcccacgg
     5581 cgacgcgttg ggcggggcat acaccgcgac tttcggcggc ttctcgagcg gaatcgcgtc
     5641 catgttcccg tcggcgagcg aggcccggag gttgatcacg tcgccgtcac tgagcggctc
     5701 actggtcaca ccggccagcg cggcatccct cgccgtcccg ccatcgccgg ggaccaggaa
     5761 cgccccgccc cggtagttca ggaaccactc ggccttcccg ccccgctcca ggacccggta
     5821 cgtcaccccg tacgccttga ggtgatcacc ctgcttgtcg tccatcggca gcagcagcca
     5881 ggccgcggtc gacacgggga tgggcggaag gcggagcagg aatccgcccg ccatcccggc
     5941 gaaccccatc tgccccgcat gtcgcaggaa gtcgcgtcgt ctcatgtttc cggcaccgcc
     6001 tggcgcgcct gatcgaggag ccgccgcgcc tgcggcacca gcggactg
//
LOCUS       DATIFF010001130         1067 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_298666, whole genome shotgun sequence.
ACCESSION   DATIFF010001130 DATIFF010000000
VERSION     DATIFF010001130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_298666"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..188
                     /locus_tag="VLD58_16505"
     CDS             <1..188
                     /locus_tag="VLD58_16505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55967.1"
                     /translation="LPAARPLLEYYANSIRHLLPQELVVAWSPAAEADATLPRLGTRE
                     EIDIRTREHPVVRRGEQ"
     gene            288..980
                     /gene="pepE"
                     /locus_tag="VLD58_16510"
     CDS             288..980
                     /gene="pepE"
                     /locus_tag="VLD58_16510"
                     /EC_number="3.4.13.21"
                     /inference="COORDINATES: protein motif:HMM:NF003642.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase PepE"
                     /protein_id="HSB55968.1"
                     /translation="MPRLLLLSNSRNPGQGILEHAREAIREFLGPGIRELVFIPFAGV
                     QIPPSAYTARVQEGLAPLGLSLRSVTDSPDPVALVASAQAIAVGGGNTFQLLRRMYET
                     GLVEAVRARALAGTPYLGWSAGSNLACPTIRTTNDMPVVQPPSFAALNLVPFQINPHY
                     TDAVIPNHGGESRADRIAEFLTLNPEVTVYGLREGSWLRVEGQTVVLGGPHPLKRFRA
                     GRAPEEVGPGEI"
BASE COUNT          155 a          374 c          360 g          178 t
ORIGIN      
        1 tccttcccgc cgcgcggccg ttgctcgagt actatgccaa ctcgatccgt cacctgctgc
       61 cgcaggagct ggtcgtcgcc tggtctcccg cggcggaagc cgacgccacg ctcccccgcc
      121 tgggcacgcg ggaggagatc gacatccgga cgcgggaaca tccggtggtg cgacgcggtg
      181 agcagtagtc ggtcaacggc aactcgatga gcggcagggc cggcacgagg caccgcgaac
      241 ctcttactcc ttactcctta ctccttactt ctcactcctc actccgcatg cctcgtctgc
      301 tgctcctctc caactcccgc aaccccggcc aggggatact cgagcatgcg cgggaggcca
      361 tccgcgagtt cctcggcccc ggcatccggg agctggtgtt catccccttt gccggggtgc
      421 agattccgcc gtcggcgtac acggcaaggg tccaggaggg attggcgccg ctcggcctct
      481 cgctgcgttc ggtgaccgac tcgcccgacc ccgtggcgct ggtggcctcg gcgcaggcga
      541 tcgcggtggg cggaggaaac accttccagc tgctccgccg catgtacgag acagggctgg
      601 tcgaggcggt gcgggcgcgg gcgctggccg gcacccccta cctcggctgg agcgccggct
      661 ccaacctggc ttgccccacc atccgcacca ccaacgacat gccggtggtg cagccgccgt
      721 cgtttgccgc gctgaacctg gtgccgttcc agatcaatcc gcactacacc gacgccgtga
      781 ttcccaatca cggcggcgaa agccgagccg atcgcatcgc cgaattcctc acgctcaatc
      841 cggaggtgac ggtttacggg ttgcgcgaag ggagctggct gcgggtggag ggacagacgg
      901 tggtgctggg cgggccgcat ccgctcaagc ggttccgggc ggggcgggcg ccggaggagg
      961 tggggccggg agagatctag agagacttcg cgttccgcgc ccggacacgt ggtggggacg
     1021 ttccgcgttc cgcgtggcgg ccgctccacc ttggtcccgc ttcaaag
//
LOCUS       DATIFF010001131         3917 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1068177, whole genome shotgun sequence.
ACCESSION   DATIFF010001131 DATIFF010000000
VERSION     DATIFF010001131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3917
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1068177"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(142..1065)
                     /locus_tag="VLD58_16515"
     CDS             complement(142..1065)
                     /locus_tag="VLD58_16515"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSB55969.1"
                     /translation="MSNSSQGLLQDLSNALASAVERAARAVVSVHARPRLPSSGVHWR
                     DGIVVTTDGTIRRTDGITVTLPDGKSVSATLRGRDAGTDLAVLSIPAGLLPVADVANE
                     PLSPGHLVLALGRIDDSGPRSSFGAVSSTGGPWRSWKGGEIEARLQSDLTIYPGLGGG
                     PLVDVGGRVHGINSGGLSRGLATTLPVKTVERVLAALLTRGYVARGYLGAALQPVRFS
                     EAAQKRIGLKESGGLVILEVDQDGPAAAGGLMLGDVVISANGHGVENPEDLLRLLTAE
                     MVGRSLKLDLVRAGSRTSAEILVGERPRRSA"
     gene            complement(1352..1870)
                     /locus_tag="VLD58_16520"
     CDS             complement(1352..1870)
                     /locus_tag="VLD58_16520"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030638 - polyketide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HSB55970.1"
                     /translation="MPRSPLAAALVLLTLLACKAAPPAEPAKAPEAPAVDPVAVVDAY
                     MAGWNAHDAAKAASQMADDVVYYDATVGVPQVSRDSAQKNVIQAFLTAAPDCSWVRDS
                     TPPIVGHDGIAFTWTFSGTHTGPFADGTKATGKKFSFKGATVIRLKGDKIAYQGDYYD
                     AYGFLKQLGLAK"
     gene            1989..3662
                     /gene="ggt"
                     /locus_tag="VLD58_16525"
     CDS             1989..3662
                     /gene="ggt"
                     /locus_tag="VLD58_16525"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HSB55971.1"
                     /translation="MPRPLYFTLALGLCMSNAASAQTPRPSTLAGRSPVYAPHGVIAT
                     SQPLATAAGLAVLQRGGNAIDAAVTAAAVLNLVEPHMTGIGGDMFALLWSAKDGKLVA
                     LNASGRAGAGMTREALLARGRTEIPINGAEPITVPGALSGWAALLQRYGTITLAQALE
                     PAIRLAEEGFPVSPIIAAQWAAEVDRLKQDEGARALFLIDGTRAPRAGEWFRNPDLAR
                     TLREIARGGPAVLYGGPLGQRIVDRVKSLGGFLTMEDLRAHKVDWVEPISVPFKGYRV
                     WELPPNNQGVAALEMLRMLEHDDLTGLGHNSAPYFHRLIEAKKLAFADLARYIGDPAA
                     MRNPVSDLLSDRFIAGRRGRLDPARAAERQEPGEAVSQSETIYLTAADAQGNMVSFIN
                     SLFEAFGSTVVVPGTGFALHDRGAGFTLDPGLPNTVAPGKRPFHTLIPGFVTRTTPQG
                     QVPWMSFGVMGGSMQPQGHVQLLLNLLVFGMDPQAAADAPRFRHFAGLRVGLEPPVPD
                     SVRAALVRMGHQVEELPPGSAGGAQLIIKLDRGYVAASDPRKDGMAAGY"
     gene            3664..>3917
                     /locus_tag="VLD58_16530"
     CDS             3664..>3917
                     /locus_tag="VLD58_16530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55972.1"
                     /translation="MRPQTSLLALALASSAILAAPLAAQTSERDRDARAILAELIGIN
                     TTAEHGSSTPAAHAVARRLLAAGFPEGDVAVVGPDTLSQNV"
BASE COUNT          600 a         1370 c         1330 g          617 t
ORIGIN      
        1 tggtgagtac cagcccatca ccccacgcga tccctgcgcc gatctgctgc ggtcccgcgc
       61 gcaactccac ggtcgactgg cggatctgcc ggaagagctc ggctgccgcc gactgggcgc
      121 cgaggatcgt tgccaacccg ctcatgcact ccgcctcggc cgctcaccga ccaggatttc
      181 ggcgctggtc cggctgccgg cccgtaccag gtcgagtttg aggctgcgtc caaccatttc
      241 ggcggtgagg agacggagca ggtcttcggg gttctccacc ccgtgcccgt tggccgagat
      301 cacgacgtcc cccagcatca gcccgcccgc cgcggccggg ccatcctgat cgacttcgag
      361 gatcaccagt ccgccgctct ccttgagccc gatacgcttc tgcgccgctt cggagaatcg
      421 taccggctgg agcgccgcgc cgagatagcc gcgcgcgaca tacccgcggg tgagaagcgc
      481 tgccagaacc cgctccaccg tcttcaccgg cagcgtcgtc gcgaggccgc ggctcagccc
      541 accggagttg atgccgtgca cccggccgcc aacatccacc agcggaccgc cgccgagtcc
      601 ggggtagatg gtgaggtcgg actggagccg cgcctcgatc tccccaccct tccagctccg
      661 ccatgggccg ccggtgctgc tcaccgcgcc gaagctcgag cgcgggccgg agtcatcgat
      721 ccgcccgagc gccagtacca ggtgcccggg gctgagcggt tcgttcgcga catccgcgac
      781 cggcagcagg ccagcgggga tcgacagcac cgccaggtcg gtcccggcat cgcggccgcg
      841 cagggtggcg ctcaccgact tgccgtcggg gagggtaacg gtgataccgt cggtgcggcg
      901 gatggtgccg tcggtggtca cgacgatgcc gtcgcgccag tgcactccgc tcgaagggag
      961 gcgcggacgg gcatgtaccg agacgacggc gcgggcagcg cgctcaaccg cgctggcaag
     1021 ggcgttcgac aggtcctgca gcaggccctg ggatgaattc gacatcgggg tcctccggtg
     1081 aggtgacaag catccggagg ggaatgtgag ggaggtggga aggggcgggt attggccgaa
     1141 cggctaggtg ggagtgagaa gtaagaagtg agaagtgaga aggggcagcg gtgtcatccc
     1201 gaggtcgctg tgcgaccgag ggatccagcc tgggcagact agatccctcg ctgcgctcgg
     1261 gatgacagcc ccttctccct tctcccttct cccttctccc ttctcccttc tcccttctcc
     1321 cttctcactt ctcacttctc actctcactt ctcacttcgc cagcccgagc tgcttcagga
     1381 acccgtacgc atcgtagtag tcgccctggt aggcgatctt gtcgcccttg agccggatca
     1441 ccgtcgcgcc cttgaagctg aatttcttgc ccgtagcctt ggtcccgtcc gcgaacggcc
     1501 cggtgtgggt gccgctgaag gtccaggtaa aggcaatgcc atcatggccc acgatcggcg
     1561 gggtggagtc gcgcacccag ctgcagtcgg gcgccgcggt caggaacgcc tggatcacgt
     1621 tcttctgggc cgagtcgcgg ctcacctgcg gcaccccgac ggtggcgtcg tagtagacca
     1681 cgtcgtcggc catctggctc gcggccttgg cggcatcgtg ggcattccat ccggccatgt
     1741 atgcgtcgac cacggcgacg ggatcaacgg caggtgcctc cggcgccttg gcgggttccg
     1801 ccggcggcgc agccttgcag gccaggaggg tgagcagcac aagcgcggcg gcgagcggcg
     1861 aacgcggcat cggtcagctc cgtcggaagg atcggttgtg gaagggacgg gagggatcgt
     1921 aacgccgcga tcggatcccg gccagactgg ggctggctcg gggggccggc ggccggtacc
     1981 atgatgccat gcccagaccc ctctatttca cgctcgcgct tggcctctgc atgtcgaatg
     2041 ccgcctcggc ccagaccccc cgtcccagca ctctcgcggg ccgctccccg gtctacgcac
     2101 cccacggtgt catcgcgacc agccagccgc tcgctacggc cgcggggctc gccgtgcttc
     2161 agcgaggcgg caacgccatc gacgccgcgg tcacggccgc ggcagtgctc aacctggtcg
     2221 agccacacat gaccgggatc ggcggcgaca tgttcgccct gctttggtcg gcgaaggacg
     2281 gaaagctggt ggccctcaac gccagcggcc gggccggcgc ggggatgacc cgagaggcgt
     2341 tgctcgcgcg gggtcgcacc gagatcccca tcaacggcgc cgaaccgatc accgtgccgg
     2401 gtgcgctgtc gggatgggcg gctctgctcc agcgctacgg caccatcacg ctggcccagg
     2461 cgctcgagcc ggcgatcaga ctggccgagg aaggattccc ggtttccccc atcattgcgg
     2521 cgcagtgggc ggcggaagtg gaccggctca agcaggatga aggcgcgcgg gcgctctttc
     2581 tgatcgacgg cactcgtgca ccccgggcgg gagaatggtt ccgcaatcct gacctcgcgc
     2641 gaaccctgcg agagatcgcc aggggcggcc cagccgtgct ctacggcgga ccgctgggcc
     2701 agcggatcgt ggaccgggtg aaatcgctcg gcgggtttct cacgatggag gacctgcggg
     2761 cccacaaggt cgattgggtg gagccgatct cggtcccctt caagggatac cgcgtctggg
     2821 aactgccacc caacaaccag ggtgtggccg cgctcgagat gctccggatg ctggagcacg
     2881 acgacctcac cggcctgggc cacaacagcg cgccctactt ccaccggctc atcgaggcca
     2941 agaagctcgc gttcgccgac ctggcccgtt acatcggcga ccccgccgcg atgcggaacc
     3001 cggtgagcga tctgctcagc gaccggttca tcgccggccg tcgcggccgc ctcgatcccg
     3061 ctcgcgccgc ggagcggcag gaaccgggag aggcggtgag ccagagcgaa accatctatc
     3121 tgaccgcggc cgacgcccag ggcaacatgg tctcgttcat caacagcctc ttcgaggcgt
     3181 tcggctccac cgttgtggtg cccggcaccg gcttcgcgct gcacgaccgg ggtgcggggt
     3241 tcaccctcga tccaggcctg ccgaacaccg tggcgccagg caagcggccc tttcacaccc
     3301 tgattccggg tttcgtcacc cgcaccacgc cgcaggggca ggtgccgtgg atgagcttcg
     3361 gcgtgatggg cgggtcgatg cagccgcagg gtcatgtgca gctgctgctc aacctgctgg
     3421 tcttcgggat ggatccgcag gccgcggccg atgccccgcg gttccgccac ttcgccggcc
     3481 tcagggttgg gctcgagcca ccggtgcccg actcggtgcg ggccgcgctc gtccgcatgg
     3541 ggcaccaggt ggaagagctg ccaccgggca gcgccggggg agcccagctc atcatcaagc
     3601 tggaccgcgg ctacgtggcg gcgagcgatc cgaggaaaga cggcatggcg gcgggatact
     3661 gacatgagac cacagacttc cctgctggcc ctcgcccttg ccagctcggc gattctcgcg
     3721 gctccgctcg cggcccagac ttccgagcga gatcgggacg cccgcgccat cctcgccgag
     3781 ctgatcggca tcaataccac tgcggaacac ggcagcagca ctcccgcggc ccacgcggtg
     3841 gcgcggcggc tcctggccgc cggctttccc gagggcgatg tcgcggtggt cggcccggat
     3901 acactctccc agaacgt
//
LOCUS       DATIFF010001132         2318 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1529569, whole genome shotgun sequence.
ACCESSION   DATIFF010001132 DATIFF010000000
VERSION     DATIFF010001132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1529569"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..461
                     /locus_tag="VLD58_16535"
     CDS             <1..461
                     /locus_tag="VLD58_16535"
                     /inference="COORDINATES: protein motif:HMM:NF012784.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HSB55973.1"
                     /translation="RADLSPHAPRIITLMVKPDKIGDIIGPKGKTIRGIQDATGAKIS
                     IEDSGLVTIAAVGGEAGEKARQMIASMVAEPEVGKIYEGPVKSTTAFGAFIEIMPGVE
                     GLLHISELQHGRTEKTEDVVKKGDVVKVKLLEVDEKGRMKLSRKALIPKE"
     gene            475..1731
                     /locus_tag="VLD58_16540"
     CDS             475..1731
                     /locus_tag="VLD58_16540"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HSB55974.1"
                     /translation="METIKLDQGLHQTVLPNGLTVLTELLPGVRSIAAGIWVRTASAH
                     EARSKMGVSHLLEHMVFKGTERRTARQLALELEVRGGSLDAYTSRDHTNYQAHVLDED
                     LPRALDVLTDLTRRPLLREDDLALERNVVLEEIATVEDTPDDLVYELFHEQLWPEHPY
                     GYSILGTPETVRRLSANDLQVLHRGGYYPGNAVVAVAGRVDHQQVLELLDREGWMQDA
                     TSAAPKPPVVPLPAVRGKAHRVERDTAQVHLVFGSDTFPYRDPRRFALSIITNVFGGG
                     MSSRLFQRIREELGLAYGVYAYQQFLASAGLSGVYVGTQPATADQAEEAIRAQYGLLA
                     NDGLTEEELVSGRQQLRGQVMLSLENPVSRMNRLASFALHHQPYRTLDTVLAEINAVT
                     RDDVMALAGEYFAPERQTMVRLGPGT"
     gene            1818..>2318
                     /locus_tag="VLD58_16545"
     CDS             1818..>2318
                     /locus_tag="VLD58_16545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HSB55975.1"
                     /translation="MIIGVPKEIKTNENRVALVPAGAEAFVTRGHEVYLEQGAGLGSG
                     FPDEAYTAAGAKILPTADAVWAKAEMIMKVKEPIAVEWPRMRAGQVIYTYFHFAAAEE
                     LTRAVIASKAIAVAYETVQLDHGELPLLTPMSEVAGRMAVQEGAKYLGKVFGGSGILL
                     GGVPGVT"
BASE COUNT          422 a          747 c          811 g          338 t
ORIGIN      
        1 accgggccga cctctcgcct catgcgcccc ggatcatcac gctcatggtc aagccggaca
       61 agatcggcga catcatcggg cccaagggca agaccattcg cggtatccag gacgccactg
      121 gcgccaagat cagcatcgag gacagcgggc tcgtcacgat cgccgcggtg ggcggtgagg
      181 cgggcgagaa ggcccgccag atgatcgcct cgatggtggc ggagcccgag gtgggcaaga
      241 tctacgaggg cccggtcaag agtaccaccg cgttcggcgc cttcatcgag atcatgcccg
      301 gcgtcgaggg cctgctccat atcagcgagc tccagcatgg ccgcaccgag aagaccgagg
      361 acgtggtcaa gaagggcgac gtggtgaagg tgaagctgct ggaggtcgat gagaagggcc
      421 ggatgaagct gtcccggaag gcgctcattc cgaaggagtg agacggcgat tcccgtggag
      481 acgatcaagc tcgaccaggg gctccaccag accgtcctgc cgaatggcct gaccgtcctg
      541 actgagttgt tgcccggcgt gcggtcgatc gccgccggga tctgggtccg gaccgccagc
      601 gcccacgagg ctcgcagcaa gatgggggtc tcccacctgc tggagcacat ggtgttcaag
      661 ggcaccgagc gacggaccgc ccggcagctg gccctcgaac tcgaggtccg cggcggctcg
      721 ctcgacgcct acaccagccg cgatcatacc aactaccagg cccacgtcct cgacgaggat
      781 cttccccggg ccctggatgt cctcaccgat cttacccggc gaccgctgct gcgcgaggat
      841 gacctcgcgc tggagcggaa tgtggtgctg gaagagatcg cgacggtgga agacactccg
      901 gacgatctgg tctatgagct gttccacgag cagctctggc ccgagcatcc ctacggctac
      961 tcgatcctcg gcacgcccga gacggtccgc cggctgtccg ccaacgacct ccaggtgctc
     1021 caccggggcg gctactaccc cggcaacgcc gtcgtggccg tggcgggaag ggtggaccac
     1081 cagcaggtgc tggaactgct cgatcgggaa gggtggatgc aggacgccac ctccgccgcg
     1141 cccaagccgc cggtcgtgcc gctgccggcg gtgcgcggga aggcccaccg ggtggagcgc
     1201 gacacggccc aggtccacct ggtcttcgga tcggacactt tcccgtaccg cgatccccgg
     1261 cgctttgccc tctccatcat taccaacgtc ttcggcggcg ggatgtccag ccggctgttc
     1321 cagcggatcc gggaggaact gggcctggcc tacggggtct acgcctacca gcagttcctg
     1381 gcctcggccg ggctctccgg ggtctatgtg gggacccagc cggccaccgc ggaccaggcc
     1441 gaggaagcga tccgggccca gtacgggctg ctggcgaatg acgggctgac agaggaagaa
     1501 ctggtctccg gccggcagca gctccgggga caggtgatgc tgtcgctcga gaatccggtg
     1561 agccggatga accgtctggc gagcttcgcg ctccaccacc agccgtaccg gacgctggat
     1621 acggtgctgg ccgagatcaa cgcagtcacg cgggacgatg tgatggcgct ggcgggggag
     1681 tatttcgcgc ccgagcggca gacgatggtg cggctggggc cgggaacata ggccggaggc
     1741 gggaggccgg agcaagaccg ctcctgccac cggccaccgg cctgtcaaca caacgatcca
     1801 aacgacaagg cgaacacatg atcatcggcg tgccgaagga aatcaaaacc aacgaaaacc
     1861 gggtggcact ggtcccggcg ggagcggaag cgttcgtgac ccgcgggcat gaggtgtatc
     1921 tcgagcaggg agccgggctg ggcagcggct tccccgacga ggcctacacc gccgccggcg
     1981 ccaaaatcct tcccacggcg gacgcggtct gggccaaggc cgagatgatc atgaaggtga
     2041 aggagccgat cgcggtcgag tggccgcgga tgcgggcggg acaggtgatc tacacctact
     2101 tccatttcgc ggcggccgaa gagcttaccc gggcggtgat cgcatccaag gccatcgcgg
     2161 tggcctacga gacggtccag ctcgaccacg gcgaacttcc gctccttacc ccgatgtccg
     2221 aggtggcggg ccggatggcg gtccaggaag gcgccaagta cctggggaag gtgtttggcg
     2281 ggagcggtat cctgctgggc ggcgtgcccg gcgttacg
//
LOCUS       DATIFF010001133         1121 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_298921, whole genome shotgun sequence.
ACCESSION   DATIFF010001133 DATIFF010000000
VERSION     DATIFF010001133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_298921"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1121
                     /locus_tag="VLD58_16550"
     CDS             <1..>1121
                     /locus_tag="VLD58_16550"
                     /inference="COORDINATES: protein motif:HMM:TIGR00641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HSB55976.1"
                     /translation="PMTSIDSTPDRDQLAARERELAALRAEVAAWRAKFGTLPVRDDS
                     DFTSVSGRSVEPAYTPLDLSPELLAQGVLPGQYPYTRGIHPSGFRGKLWTMRQFAGFG
                     TAEDTNARYKFLLSRGQTGLSVAFDFPTLMGYDSDHPRSEGEVGKCGVAISSLADMET
                     LFDGIPLDQVSTSMTINGPAAIIFCFYVAAAEKQGVPIGKLQGTIQNDILKEYMAQHA
                     WIFPAEPALKVIVDLFEWSAEHTPKWNTISISGYHIREAGSTAVQELAFTLANGFCYV
                     EHGIARGLAVDSFAPRLSFFWDVHNDFFEEIAKMRAARRIWAREMRNRFQAKDPASWL
                     VRFHTQTAGCSLTAQQPENNIVRTAFEGLAAVLGGTQSL"
BASE COUNT          176 a          407 c          352 g          186 t
ORIGIN      
        1 cgcccatgac gagcatcgac agcacccccg atcgcgatca gctcgcggcc cgcgagcggg
       61 aactcgccgc gctccgcgcc gaggtggcgg cgtggcgggc caagttcggc accctgccgg
      121 tccgcgacga ttccgatttc acttccgtgt ccggccggag cgtggaaccg gcctacaccc
      181 cgctcgacct ctctcccgag ctcctggcgc agggcgtgct ccccgggcag tacccctaca
      241 cccgcggcat ccatcccagc gggttccgcg gcaagctctg gacgatgcgg cagttcgccg
      301 gcttcggcac cgccgaggac accaacgccc ggtacaagtt cctgctttcc cgcgggcaga
      361 ccggcctctc ggtggccttc gacttcccga cgctcatggg ctacgactcc gaccaccccc
      421 gctccgaggg cgaggtcggg aagtgcggcg tggccatctc gtcgctggcc gacatggaga
      481 cgctcttcga cggcatcccg ctggaccagg tgtccacgtc gatgaccatc aatggcccgg
      541 ccgccatcat cttctgcttc tacgtggccg ccgccgagaa gcagggcgtg ccgatcggca
      601 agctgcaggg caccatccag aacgacatcc tcaaggagta catggcgcag cacgcctgga
      661 tcttcccggc ggagcccgcg ctcaaggtca tcgtggacct cttcgagtgg tccgccgagc
      721 acacgccgaa gtggaacacc atctcgatct cgggttacca catccgcgag gcgggttcca
      781 ccgcggtgca ggagctggcc ttcaccctgg ccaacggctt ctgctatgtg gagcatggga
      841 tcgcgcgcgg gctcgcggtc gacagcttcg cgccgcggct ctcgttcttc tgggacgtgc
      901 acaacgattt cttcgaggaa atcgccaaga tgcgggcggc ccgccggatc tgggcccggg
      961 agatgcggaa tcgcttccag gccaaggatc ccgcttcctg gctcgttcgc ttccacaccc
     1021 agaccgcggg gtgttcgctc accgcgcagc aacccgagaa caacatcgtg cgcaccgcgt
     1081 tcgagggatt ggccgcggtc ttgggcggca cgcagtcctt g
//
LOCUS       DATIFF010001134         1264 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1990459, whole genome shotgun sequence.
ACCESSION   DATIFF010001134 DATIFF010000000
VERSION     DATIFF010001134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1264
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1990459"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..457
                     /locus_tag="VLD58_16555"
     CDS             <1..457
                     /locus_tag="VLD58_16555"
                     /inference="COORDINATES: protein motif:HMM:NF020742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /protein_id="HSB55977.1"
                     /translation="KPGAKYYEWEGRGVPFRVEIGPRDVAAGTVMLARRTGGKKTPFQ
                     TQGLAHSLRIEMDAMQQELFEAARTRREQNSIRGVTKGSFIDFMQRDGGFAYGGWCGD
                     AKCEADIKEQTKATIRCLPDEEFRSADAPATCMWCGNKAVAEAVWAKAY"
     gene            439..>1264
                     /locus_tag="VLD58_16560"
     CDS             439..>1264
                     /locus_tag="VLD58_16560"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF014803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HSB55978.1"
                     /translation="MGQGVLSDPKAAGSAVSAAQRAVLFEDAGLERRGGALFFGGVRL
                     VDVARGAGTPTYVYNADVIRRQYRRLDDSLKDVPHRICFAVKANSNLAVLRIFRDLGA
                     GADIVSGGELRRTLAAGFPAERVVFSGVGKSEAELELALTSGVGHIHMESADELAKLG
                     ALANRLDQHVTVGIRVNPDVTADTHPYIATGQGGIKFGVPFDQVLDLAKAIRAHGRLR
                     LDSIAMHIGSQILDPSPYRQGVTKLAALVANIRVAGIDTLRTLDIGGGLGIRYKDEI"
BASE COUNT          201 a          416 c          463 g          184 t
ORIGIN      
        1 caagcccggc gccaagtatt acgagtggga agggcgggga gtccccttcc gggtcgagat
       61 tggtccgcgg gacgtcgccg cgggaacggt gatgctggct cggcgcactg gcggcaagaa
      121 gacgccgttc cagacccagg gcctggccca ctcgctccgc atcgagatgg atgcgatgca
      181 gcaggagctg ttcgaggcgg cgcgcacccg gcgggagcag aacagcatcc gcggggtgac
      241 caagggctcc ttcatcgact tcatgcagcg cgatggcggt tttgcctacg gcggctggtg
      301 tggcgatgcc aagtgcgagg ccgacatcaa ggagcagacc aaggcgacca tccggtgcct
      361 gccggacgag gagttccgtt cggccgatgc gccggccacc tgcatgtggt gcggcaacaa
      421 ggcagtcgcg gaggcggtgt gggccaaggc gtactgagcg acccgaaggc cgccggctcg
      481 gcggtgagcg ccgcccagcg ggcggtgctc ttcgaggacg ccggcctcga gcggcgcggg
      541 ggcgcgctct tcttcggtgg agtccggctg gtcgacgtgg cccgtggcgc cggcacgccg
      601 acctacgtct acaacgccga tgtcatccgg cggcagtacc gccgcctgga cgactcgctc
      661 aaggatgtgc cgcaccggat ctgcttcgcg gtgaaggcga acagcaacct cgccgtgctc
      721 cggatcttcc gggacctcgg cgccggcgcc gatatcgtgt cgggcggtga gctccgccgc
      781 accctcgcag cggggttccc ggcggagcgg gtggtcttca gcggcgtcgg caagtcggag
      841 gccgagctcg agctggcgct cacgagcggg gtgggccaca tccacatgga gtcggccgac
      901 gagctggcca agctcggcgc gctggcgaac cggctcgacc agcacgtcac cgtcggcatc
      961 cgggtgaatc ccgatgtcac cgccgacacc catccctaca tcgcgacggg gcagggcggg
     1021 atcaagttcg gagtgccgtt cgaccaggtg ctcgatctcg ccaaggcgat ccgggcccat
     1081 ggccggctcc ggctggacag catcgcgatg catatcggca gccagatcct cgatccctcg
     1141 ccctaccggc agggggtgac caagctggcc gcgctggtgg cgaacatccg ggtcgccggg
     1201 atcgacaccc tgcgcacgct cgatatcggt ggcgggctgg gcatccggta caaggacgag
     1261 atcc
//
LOCUS       DATIFF010001135         2063 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1068346, whole genome shotgun sequence.
ACCESSION   DATIFF010001135 DATIFF010000000
VERSION     DATIFF010001135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1068346"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..651)
                     /locus_tag="VLD58_16565"
     CDS             complement(<1..651)
                     /locus_tag="VLD58_16565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55979.1"
                     /translation="MLTRAPSPSWTRLRRAVIARGFTPATWIPAASEGRAEEATIQPA
                     ERVEAGPLTGRAVGPAEPWPELVAFLDGAQRYEVMAYAGASPVVVAEIGAAVLERRSR
                     QLHVARVLRQRLVLARREVLDQLEGAVERHLFVPLPDDDPVHPVRDFQLARREIDRAR
                     GKLEVKVGSEYRAGSDAWLILDGSLSESRDWADDPRMLGITKSHATLPFADEELEQY"
     gene            complement(684..1916)
                     /locus_tag="VLD58_16570"
     CDS             complement(684..1916)
                     /locus_tag="VLD58_16570"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HSB55980.1"
                     /translation="MPDPLSPNLAYLKPSETVAISNETKRRRAAGEDVIDLSVGEPDF
                     DTPRAAAEAGETAIEKGMTRYPANIGIAELRAAIARNLSLMSGGRAINPDQIVVSSGS
                     KQSIFNACFSLFGPKDKVLIPSPAWVSYPQIVSLCRAEPVLVPGDPEWGLKVSVKDLE
                     AKTDKLVKGLIICSPCNPTGATYTASEIKAIAEWARAHQVWIIADEIYRRIYYGNDAA
                     PAPSFLDLPDELLERVVLIYGASKAYAMTGWRIGAAYAPMHLAKAMAALQSHTTTGAN
                     HPAQWAAVTAFTDERVEQEVVKMVAAFRRRRDRVVSRFRASAPGVEFVEPTGAFYFFF
                     RVDGVTPTHDYTGTQFCEAAMTAGVALVPGAAFGDDRWVRMSYAASDKDLETALDRIL
                     GLIAKLGAGSAAKQVVGK"
BASE COUNT          332 a          689 c          730 g          312 t
ORIGIN      
        1 atactgctcc agctcttcgt cagcgaaggg cagcgtggcg tgactcttgg tgatcccgag
       61 catgcgggga tcgtcggccc agtcgcggct ctcggagagc gacccgtcaa ggatgagcca
      121 ggcgtcgctg ccggcgcggt actcgctccc tacctttacc tcgagcttgc cccgggcgcg
      181 gtcgatctcg cggcgggcca gctggaagtc gcgcaccggg tgaaccggat cgtcatcggg
      241 aaggggaacg aagaggtggc gctcgacggc gccctcgagc tggtccagca cctcgcggcg
      301 ggccagcacc agccgctggc gcagcacccg ggccacgtga agctgacggg accggcgctc
      361 cagcaccgcc gcgccaatct ccgcgaccac caccgggctg gccccggcat aggccatcac
      421 ttcgtagcgc tgggccccgt cgaggaaggc caccagttcc ggccagggtt cggccggccc
      481 gaccgcccgc ccggtgagcg gtccggcctc cacccgctcg gcgggctgaa tggtcgcttc
      541 ttccgcccgt ccttcgctgg ccgcgggaat ccaggtggcc ggggtgaagc cccgcgcgat
      601 gacggcgcgg cggagacggg tccagctggg gctaggggct cgggtcagca agaagagcgg
      661 ccattgtcca tggctaacgg ccgctacttc cccacaacct gcttcgcagc cgatccggcg
      721 ccaagcttcg cgatcagccc caggatccgg tcgagcgcgg tctcgaggtc cttgtcgctc
      781 gcggcgtagc tcatccgcac ccagcggtca tcgccgaaag cggcgccggg caccagcgcc
      841 acgcccgccg tcatggccgc ttcgcagaac tgggtgccgg tgtagtcatg cgtcggggtg
      901 acgccgtcga cccggaagaa gaagtagaac gccccggtcg gctccacgaa ctcgacgccc
      961 ggcgcggagg cgcggaagcg cgagaccacc cggtcccggc ggcggcggaa ggcggcgacc
     1021 atcttcacca cctcctgctc cacccgctcg tcggtgaagg cggtgaccgc ggcccactgg
     1081 gccggatgat tggcgccggt ggtggtgtgg gactgaagcg cggccatcgc cttggccagg
     1141 tgcatcggcg cataggccgc accgatccgc cagccggtca tcgcgtaggc cttggaggcg
     1201 ccgtagatca gcaccacccg ttcgagcagc tcatcgggca ggtcgaggaa cgagggcgcc
     1261 ggggcggcgt cgttgccata gtagatccgg cgatagatct cgtcggcgat gatccagacc
     1321 tgatgggccc tggcccattc cgcgatggcc ttgatctcgc tggcggtgta ggtggcgccg
     1381 gtcgggttgc agggcgagca gatgatgagc cccttcacca gcttgtcggt cttggcctcg
     1441 agatccttca cgctgacctt gagcccccac tccggatcgc ccggcaccag caccggctcg
     1501 gcccggcaaa gcgacacgat ctgggggtag gacacccagg ccggcgaggg gatcaggacc
     1561 ttgtccttgg gcccgaagag gctgaagcag gcgttgaaga tcgactgctt ggagccggaa
     1621 ctcaccacga tctggtcggg attgatggcg cggccacccg acatgagcga caggttgcgg
     1681 gcgatcgcgg cccggagctc tgcgatcccg atattggcgg ggtagcgggt catccccttc
     1741 tcgatcgccg tctcaccagc ctcggcggcg gcgcggggag tgtcgaaatc gggctccccg
     1801 acgctgaggt cgatcacgtc ctcaccggca gcccggcggc gcttggtctc attgctgatg
     1861 gcgacggttt cggagggctt gagatatgcc aggttgggtg aaagcggatc gggcatgacg
     1921 gagtcccgcg gtggaaggac aggaacctgg cccctgaaca accggaaggc ccgccaacgt
     1981 gtgcgggccc acgggagaga ccatcggcgg cagacgaagg ctcgaggaca ggggaaattc
     2041 cccctgtgtg acgtggaagt caa
//
LOCUS       DATIFF010001136         1347 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_450762, whole genome shotgun sequence.
ACCESSION   DATIFF010001136 DATIFF010000000
VERSION     DATIFF010001136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_450762"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..553)
                     /locus_tag="VLD58_16575"
     CDS             complement(<1..553)
                     /locus_tag="VLD58_16575"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSB55981.1"
                     /translation="MKAQFTFLSGSRAGQTSIFGQSYISIGRHPQCELQFDPEKDLDV
                     SSRHAVVAREGDLYVLRDLGSTNGTFVNGRRLSGDHLLATRDVIRFGPNGPQLEFTAI
                     GDTRPGPSTAPSPARSSGTVVFGRQDETPPPAPRLTAEQLQSPRRTPGPGTTTRVQIA
                     VHRETRGLRRTALILFGLVLVLSA"
     gene            complement(576..>1347)
                     /locus_tag="VLD58_16580"
     CDS             complement(576..>1347)
                     /locus_tag="VLD58_16580"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HSB55982.1"
                     /translation="DDPDSSAQRFAYRIKEAVELANNRIHHHAREHPEVRGMGTTATV
                     AGIFGSDLYLAQVGDSRAYLIRDGVATQLTKDQSLMQRLVEAGEITEEEAEQSERRNI
                     ILQALGPDPRVKVDLTYQSLRRGDLLVLCSDGLSGQVKKEEIAAFAAETPDLVELCAR
                     LIHLANERGGPDNITAVAARFGGSGLPEPDGAADVGHQVYPLTESEATTEPVPVYTGS
                     PTPVPLAQQQPGQTRWVAIGVLALVALALALLMVFTTR"
BASE COUNT          191 a          451 c          491 g          214 t
ORIGIN      
        1 ctgccgataa cacgagcacc agcccgaaca gaatcagggc cgtgcggcgc agcccccggg
       61 tctcccggtg caccgcgatc tggacccggg tcgtggttcc gggtcccgga gtgcgccgcg
      121 ggctctgcaa ctgctcggcg gtgagcctcg gcgcaggcgg gggcgtctcg tcctgacgcc
      181 cgaacacgac cgtcccggac gatcgggcgg gcgatggggc ggtggacggc ccgggcctgg
      241 tgtcgccgat ggcggtgaac tcgagctggg ggccattggg gccgaaccgg atgacatccc
      301 gggtcgcgag caggtggtcg ccgctcaggc gccggccgtt gacgaaggta ccgttggtgc
      361 tgccgaggtc ccggagcaca tacaggtccc cctcgcgggc gaccaccgca tgccggctgg
      421 agacgtcgag atccttctcg ggatcgaact gcagctcgca ctggggatgg cggccgatgc
      481 tgatgtagct ctggccgaag atggatgtct ggcccgcccg cgagccggag aggaaggtga
      541 actgcgcttt catggcgcgg gcgccggggc tcggcctagc gggtcgtgaa gaccatgagc
      601 agcgccagcg cgagcgccac cagggccagt actccgatcg ccacccagcg cgtctgcccc
      661 ggctgctgct gggcgagcgg aaccggggta gggctcccgg tgtaaaccgg caccggctcg
      721 gtggtggcct cgctctcggt gagtgggtaa acctggtggc cgacgtcggc cgctccatcc
      781 ggctcgggca gtcccgagcc accgaaccgg gccgcgacgg ccgtgatgtt gtccggcccg
      841 ccacgttcgt tggcgagatg gatcagccgg gcacagagct ccaccaggtc cggcgtctcg
      901 gcagcgaagg cggcgatctc ctccttcttg acctggcccg agaggccgtc ggagcagagc
      961 accaggagat cgccgcggcg cagcgactgg taggtgagat ccaccttcac ccggggatcg
     1021 gggccgagcg cctggaggat gatgttgcgc cgttcgctct gctccgcctc ctcttcggtg
     1081 atctccccgg cctctaccag ccgctgcatc agggactggt ccttggtgag ctgggtcgcg
     1141 acaccgtcgc ggatcaggta cgcccggctg tcgcccacct gggccaggta gaggtcggat
     1201 ccgaagatcc cggccaccgt ggcggtggtc cccatccccc ttacctcggg atgctcgcgg
     1261 gcgtggtggt ggatccggtt gttcgccagc tccaccgcct ctttgatccg gtaggcaaag
     1321 cgctgagccg aggagtccgg atcgtcc
//
LOCUS       DATIFF010001137         2427 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_299180, whole genome shotgun sequence.
ACCESSION   DATIFF010001137 DATIFF010000000
VERSION     DATIFF010001137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2427
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299180"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..199
                     /locus_tag="VLD58_16585"
     CDS             <1..199
                     /locus_tag="VLD58_16585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55983.1"
                     /translation="RGDLRVRHRGNHASIEVDRAMRPLLEQAWSRVEARLLALGFERV
                     ALDPRGYRRGGLLAELPVLGT"
     gene            199..762
                     /gene="thpR"
                     /locus_tag="VLD58_16590"
     CDS             199..762
                     /gene="thpR"
                     /locus_tag="VLD58_16590"
                     /inference="COORDINATES: protein motif:HMM:TIGR02258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008664 - 2'-5'-RNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HSB55984.1"
                     /translation="MRLFVAIPVEGEVAEALGRVLGKWQHNGWPVKWAKADGLHLTLK
                     FLGAVAAEQYGSLAEAVGRAVRGTPALSFTLTELGVFPGLAHARVLWAGLESESALEL
                     LVHRLEEGCAAIGFPLEGRPYRPHVTLGRVRAGSRLAPGAIGEFEKESLPRATFLSNE
                     VVLYESFTGAEGARYEVRATFPLSQPA"
     gene            759..1394
                     /locus_tag="VLD58_16595"
     CDS             759..1394
                     /locus_tag="VLD58_16595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55985.1"
                     /translation="MKLLLRLLGIIVLALVLSGAWLFRHELIRRFGPGTAASRAAADA
                     ASGTPSNTALARARDKIDSLHGWSADSVVLTPAEAASLLLEGLPAESRRHLDSVSVEL
                     GTGRITVTALLESAAIPRDQLGPLAGALRPWERVKAAGPVTVPRPAQAVWQVEALTIR
                     GFTLPEAASRRLIGRALRGADEGAITLTLPRGVAGLHIRPSGVALFREETR"
     gene            1391..>2427
                     /locus_tag="VLD58_16600"
     CDS             1391..>2427
                     /locus_tag="VLD58_16600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSB55986.1"
                     /translation="MTHRLLVVDDEPGIRDALKQVLEYEGLEVRVAGSGGEALTLYPD
                     LRPHLVFLDVKMAGLDGLETLTRLRELDPAAVVVMISGHGTIATAVEATRRGAFDFLE
                     KPLDTDRLLVTVRNALERVQLRGENQRLKKESESRFAMIGTGAALKEVREVIARVAPT
                     NARVLITGENGSGKELVARAIHEASPRRAQAFVEVNCAAIPSELIESELFGHMKGSFT
                     GAVTDRAGKFELADDGTLFLDEIGDMSPSAQAKVLRALQEGVITRICGAKPIQVDVRV
                     IAATNKLLDEEIAAGRFREDLFYRLNVVPIQVPALRERKEDIPALVEHFVKQLAGTTG
                     IAPRTFEAGAL"
BASE COUNT          355 a          770 c          910 g          392 t
ORIGIN      
        1 gaggggcgat ctccgcgtcc gtcaccgcgg caaccacgcc tccatcgagg tcgatcgggc
       61 gatgcggccg ctgctcgagc aggcgtggtc ccgggtcgag gcgcggctgc tggcgctggg
      121 attcgagcgg gtcgcgctcg acccgcgcgg ctatcgccgt ggcgggttgc tggccgagct
      181 gccggtgctt ggcacctgat gcgcctgttc gtcgccatcc cggtcgaggg agaggtcgcg
      241 gaggctctcg gtcgtgtgtt ggggaagtgg caacacaacg gctggccggt gaaatgggcc
      301 aaggcggacg gactgcatct gacgctcaag ttcctggggg cggtggcagc ggagcagtac
      361 ggatcgctgg ctgaagcggt cggtcgcgcg gtgcgcggca cgccggcgct gtccttcacc
      421 ctcacggagc tcggcgtctt cccgggactc gcccacgcgc gggtgctctg ggccggactc
      481 gagagcgaat ctgcgctcga actgctggtg caccgcctgg aggaagggtg cgccgcgatc
      541 ggcttccccc tcgaagggcg gccttaccgg ccccatgtga cgctgggacg ggtgcgggcc
      601 ggcagccggc tggcgccagg cgccatcggg gaattcgaga aggaatcact cccgagggcg
      661 acgtttctct cgaacgaagt ggtcctctat gagagcttca ccggcgccga aggggctcgc
      721 tacgaggtgc gggccacctt tccattgagt cagccggcat gaagctgctg ctgcgtcttc
      781 tgggtatcat cgtcctcgcg ctggtgttga gcggggcgtg gctcttccgc catgagctga
      841 ttcggcgctt cggtccagga actgcggcgt cacgtgctgc cgccgacgcg gcgtccggaa
      901 cgccgagcaa caccgcgctg gcgcgagccc gggacaagat cgacagcctc cacggctggt
      961 cggccgattc ggtcgtgctt actccggcgg aggcggcgtc gctgttgttg gaggggctcc
     1021 cggcagagtc ccgccggcac ctcgattcgg tctcggtgga actcgggact ggccggatca
     1081 ccgtgacggc gctgctcgag agcgcggcga ttccgaggga ccagctgggc ccgctggcgg
     1141 gggcgctgcg cccctgggag cgggtcaagg cggcgggtcc cgtcacggtg cctcggcccg
     1201 cccaggccgt gtggcaggtt gaggcgctca ccatccgcgg gttcacgctg ccggaggcgg
     1261 cgagccggcg cctgatcggc agggcgctcc ggggagcgga tgagggggcc attaccctga
     1321 cgcttccgcg cggggtcgcg ggcctgcaca ttcgcccgag cggggtggca ctcttccggg
     1381 aggaaacgcg atgacccatc gcctgctggt ggtggatgac gagcccggca tccgggatgc
     1441 cctcaagcag gtgctggagt acgagggact cgaggtgcgg gtggctggat ccggcggcga
     1501 ggcgctcacc ctctatccgg acctccggcc ccacctggtg ttcctcgacg tgaagatggc
     1561 cggtctcgat ggcctcgaga cgcttacccg gctgcgcgag ttggaccccg ccgcggtggt
     1621 ggtgatgatc tcgggccatg gcaccattgc gacggcggtg gaggccaccc gtcgcggcgc
     1681 gttcgatttc ctggagaagc cgctcgacac cgaccgcctg ctggtgacgg tacggaacgc
     1741 gctcgaacgg gtgcagcttc ggggtgagaa ccagcggctc aagaaggaga gcgagtcccg
     1801 cttcgccatg atcggcacgg gggcggcgct caaggaagtg cgggaggtca ttgcccgggt
     1861 ggcgcccacc aatgcccgcg tgctcatcac cggcgagaac ggcagcggca aggagctggt
     1921 cgcccgcgcc atccacgagg cctctccccg cagggcccag gcattcgtag aggtgaactg
     1981 cgccgccatc ccctcggagc tgatcgagag cgaactcttc ggccacatga agggctcgtt
     2041 caccggcgcc gtgacggacc gggccggcaa gttcgagctg gccgacgacg gtaccctctt
     2101 cctcgacgag atcggggaca tgtcgccctc ggcccaggcc aaggtgctgc gggcgctgca
     2161 ggaaggggtg atcacccgga tctgtggtgc caagccgatc caggtggacg tgcgagtgat
     2221 cgcggccacc aacaagttgc tggacgagga gattgcggcg gggcggttcc gggaagatct
     2281 cttctaccgg ttgaacgtgg tgccgatcca ggtcccggcg ctccgtgagc ggaaagagga
     2341 catccccgcg ctggtggagc atttcgtgaa gcagctcgct ggaacgaccg ggatcgcacc
     2401 ccgtacgttt gaagcgggag cgctgga
//
LOCUS       DATIFF010001138         1225 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1529921, whole genome shotgun sequence.
ACCESSION   DATIFF010001138 DATIFF010000000
VERSION     DATIFF010001138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1225
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1529921"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..444
                     /locus_tag="VLD58_16605"
     CDS             <1..444
                     /locus_tag="VLD58_16605"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HSB55987.1"
                     /translation="DSLAAHSNRLAATPSILPTQGWLSSAFSAMREHPILHVARPHEG
                     IDVSAPMGTPIEAPAAGVVRSTGWEAGYGNTIEIDHGFGIVTRFAHTSRILVHQGEHV
                     QRGQRIALVGNTGLTTGPHLHYEVHVNGKPVDPLRYVMPEGVVTD"
     gene            complement(446..1012)
                     /locus_tag="VLD58_16610"
     CDS             complement(446..1012)
                     /locus_tag="VLD58_16610"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HSB55988.1"
                     /translation="MTRTRLSASALLGAALLLTGCGYNTMQSLDEQINQAQGQIQTQL
                     QRRADLVPNLVSTVKGITKQEDTVFISIANARARLSGAVQARDVEGMATANDQLSAGL
                     GRLLAISENYPELRSSENFKELQDQLEGTENRIAVARTDYNTAVGQFNAYVRRFPYNL
                     TAKVFGLDKPRPYFQAQPGTQEPPKVQF"
     gene            complement(1009..>1225)
                     /locus_tag="VLD58_16615"
     CDS             complement(1009..>1225)
                     /locus_tag="VLD58_16615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55989.1"
                     /translation="LVGRPAPADPRAVMEGAGALVGFDPAPLLRVLACRAAPATRLAA
                     PDFEAYLDAVDRTARFTDQLQLGDQHP"
BASE COUNT          179 a          431 c          422 g          193 t
ORIGIN      
        1 gacagcctgg ccgcccacag caaccgcctg gccgccactc cgtccatcct gccgacccag
       61 ggctggttgt cgagcgcctt ctccgcgatg cgggagcacc cgatcctgca cgtggcccgg
      121 ccgcatgaag gcatcgacgt gtcggcgccg atgggcaccc cgatcgaagc accggccgcc
      181 ggcgtggtgc ggtccaccgg gtgggaggcg ggttacggca acacgatcga aatcgatcac
      241 ggcttcggga tcgtcacccg cttcgcccat acgtcgcgga tcctggtgca ccagggcgag
      301 cacgtgcagc ggggccagcg gatcgcgctc gtgggcaaca ccggcctcac caccggcccg
      361 cacctgcact acgaggtgca cgtgaacggc aagccggtgg atccgctgcg ctacgtgatg
      421 ccggagggcg tcgtcaccga ctgatctaga actggacctt gggtggctcc tgggtgcccg
      481 gctgcgcctg gaaatacggg cggggcttgt ccagcccgaa caccttggcc gtgaggttgt
      541 aggggaaccg ccgtacatac gcgttgaact gccccaccgc cgtgttgtag tccgtccgcg
      601 ccaccgcgat ccggttctcc gtcccctcga gctggtcctg cagctccttg aagttctcgc
      661 tcgagcggag ctccggatag ttctccgaga tcgccagcag ccggcccagc ccggcgctca
      721 gctggtcgtt ggccgtcgcc atcccctcga catcccgcgc ctgcaccgcg cccgacagcc
      781 gggcgcgcgc gttggcgatc gagatgaaca ccgtgtcttc ctgcttggtg atccccttga
      841 ccgtgctcac caggttggga acgagatcgg cgcgccgctg cagctgggtc tggatctgcc
      901 cctgggcctg attgatctgc tcatccaggg actgcatggt gttatagccg catcccgtga
      961 ggagcagcgc ggcgccgagc agcgccgaag ccgacagccg ggtccgggtc atgggtgctg
     1021 gtctccgagc tggagttgat cggtgaagcg tgccgtccgg tcgacggcgt cgagataggc
     1081 ctcgaaatcg ggcgccgcga gccgggtcgc cggggcggcc cggcaggcga gcacccggag
     1141 cagcggtgcc gggtcgaagc cgacgagcgc gccggcgcct tccatcaccg cacgcgggtc
     1201 ggccggcgcg ggccgcccca cgagc
//
LOCUS       DATIFF010001139         2815 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_911759, whole genome shotgun sequence.
ACCESSION   DATIFF010001139 DATIFF010000000
VERSION     DATIFF010001139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2815
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_911759"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            75..563
                     /locus_tag="VLD58_16620"
     CDS             75..563
                     /locus_tag="VLD58_16620"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HSB55990.1"
                     /translation="MRLGIISDTHGLLRPEVFDVFKEVDQIIHAGDIGPLDLLTELEA
                     IAPVLAVYGNTDGFDVRTRVPAIIETRIEGLDFVILHGDQLGSPTPAKAHDAWPKADV
                     IIYGHTHRPLLTTVDLTVTVMNPGGAGARRFDLPASVGIMELETGLPPRARLVALTPA
                     DE"
     gene            570..1199
                     /locus_tag="VLD58_16625"
     CDS             570..1199
                     /locus_tag="VLD58_16625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55991.1"
                     /translation="MIPPLAVLALLTDTLRIVPSAHAPVFDGRADSAEYGVPSVTIRR
                     PAGTVQLWLRIFEGSVYLAARLPDSTFYWGDDLVISLDTRGDRAAAPQHDDFQWYFRR
                     VLDSSVVFRGDGGRWQPPLGDPDWTLGKAREGGGWEVRSVDDGAGWSLELKLDQAYFG
                     EAGAGNPGLAFRVYDNDPHGWQVWPAPAGLKQATEVERRPALWAVVTRP"
     gene            complement(1186..>2815)
                     /locus_tag="VLD58_16630"
     CDS             complement(1186..>2815)
                     /locus_tag="VLD58_16630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55992.1"
                     /translation="TDPEVLLALNRVERVVGDQRHAVEAARALVASDSSGLPLHELAA
                     SALALGDSSGDAAYYAGAAFDDSVSVAAYREDLALIADDSVLAEFDTARGEARVAWLR
                     AFWTDHGRAALRSDSERLREHYRRIAYAERYFGLEVNRRYYTDGDEPGSNGFGHADMY
                     RSGSMRFDDRGIVYIRYGEPSEKVLTVTYQIQPNETWTYRRADGDFLLHFAANPGGDI
                     HDLRLVPSVASIGGVDPDNADKAATLFAFNDRCKVYSPYCKYLNWGGFGRERVLREER
                     EIVHASVTNAVTTDGQELRFSRPLGAAAKAFAVGQAGDRQLVHIVYQVALQRPDSLPG
                     DAVFRTPLRVRVNLTDSTGRSRGWLDTTTTILTQGGGVTQRAVDAVGRVTLTAPAGRW
                     RYQIALSYDDSTGKVIRSDSVTVDRFDGSSLALSDLVLSKDGKGAPWAPTPGDTAWFN
                     PRTNWNRDDVLAVYHEVYGLAPGSEYREELVLRRGKKAELTLGWSGVAQEPTLRVARM
                     LSLSRVKPGRYVIEFVVRLPDGRTAMTRQPITVE"
BASE COUNT          435 a          956 c          973 g          451 t
ORIGIN      
        1 aggcgcagag ggccgcggag gcttcggtgg actctctgcg gccctccgcg tctctgcggt
       61 gaggtatttg gagcatgaga ctggggatca tttccgatac gcacggtctc ttgaggcccg
      121 aagtatttga cgtgttcaag gaagtcgacc agatcatcca cgccggcgat atcggcccgc
      181 tcgatctcct gaccgagctc gaggccatcg ccccggtcct ggcggtgtac ggcaacactg
      241 acggcttcga tgtccgcacc cgcgtccccg ccatcatcga gacccggatc gaaggcctcg
      301 atttcgtcat cctgcacggc gaccagctcg gcagccccac tcccgcgaag gcccacgacg
      361 cctggccgaa agccgatgtc atcatctacg gccacaccca ccgcccgctg ctcaccaccg
      421 tcgacctgac ggtgacggtg atgaatcccg gcggcgccgg ggcccgtcgg ttcgaccttc
      481 ccgcatcggt cggcatcatg gaactggaaa ccggactgcc tccgcgggcg agactggtcg
      541 cgctcacccc ggccgacgaa tagcgccgaa tgatcccccc gctcgccgtg ctcgcgctcc
      601 tcaccgatac gcttcgcatc gttccatccg cgcatgcacc ggtcttcgac ggccgagccg
      661 actccgcgga gtacggagtt cccagcgtga ccatccgcag gccggcaggg acggtgcagc
      721 tctggctccg gatcttcgag ggcagcgtct acctcgcggc gcggctgccc gactcgacct
      781 tctactgggg cgacgacctg gtgatcagcc tcgatacccg gggcgatcgc gcggccgcgc
      841 cacagcacga tgatttccag tggtatttcc ggagggtgct ggacagctcg gtggtattcc
      901 gcggcgacgg aggccgctgg cagccgccgc tgggcgaccc tgactggacg ctcggaaagg
      961 cgcgggaggg agggggctgg gaggtgcggt cggtggatga cggcgccggc tggtcgctcg
     1021 agctcaagct ggaccaggcg tatttcggcg aagccggagc ggggaacccg ggactggcgt
     1081 tccgggtcta cgacaacgat ccccacggct ggcaggtctg gcccgcgccc gcaggcctca
     1141 agcaggccac cgaagtggag cgccgcccgg cgctctgggc agtggttact cgaccgtgat
     1201 cggctggcga gtcatcgccg tccgtccatc cggcagccgc accacgaatt cgatcacata
     1261 ccggcccggc ttcacccgcg agagcgagag catccgcgcg actcgaaggg tgggttcctg
     1321 cgccacccct gaccagccga gggtcagctc ggccttcttg ccccggcgga gcaccagttc
     1381 ctcccggtac tcgctgccgg gcgcgagccc gtagacttcg tggtagaccg ccaggacatc
     1441 gtcgcggttc cagttggtcc gcgggttgaa ccaggcggta tcacccggag tgggggccca
     1501 gggcgcgccc ttgccgtcct tcgagaggac caggtcactc agggccaggg aacttccgtc
     1561 gaagcggtcc actgtgacgc tgtcgctccg gatgaccttg ccggtgctgt cgtcgtacga
     1621 gagggcgatc tggtagcgcc accgacccgc gggtgcggtc agggtcaccc ggcccacggc
     1681 gtcgaccgcg cgctgagtga cgccaccgcc ctgggtcagg atggtggtgg tggtgtcgag
     1741 ccagccgcgg ctccggccgg tgctgtccgt caggttcacg cggacccgga gcggggtgcg
     1801 gaagacggcg tccccgggca gggaatcggg ccgctggagc gccacctggt agacgatatg
     1861 gaccagctgg cggtctccgg cctggcccac ggcgaaggcc ttcgctgccg cgcccagcgg
     1921 ccgcgagaag cgcagctcct ggccgtcggt ggtcaccgcg ttggtcacgc tggcgtggac
     1981 aatctcccgc tcctcgcgca ggacccgctc acggccgaac ccgccccagt tgagatactt
     2041 gcagtagggc gagtagacct tgcaccggtc gttgaaggca aagagcgtgg ctgccttgtc
     2101 ggcgttgtcc ggatccaccc cgccgatcga ggcgacgctg ggcacaagcc gcaggtcgtg
     2161 gatgtcacca ccggggttgg ccgcgaagtg caggaggaag tcgccatcgg cccggcgata
     2221 ggtccaggtc tcgttgggct gaatctggta ggtgacggtg agaaccttct cgctcggctc
     2281 accatagcgg atgtagacga tgccccgatc gtcgaagcgc atgctgccgg agcgatacat
     2341 gtcggcatgg ccgaatccgt tgctgcccgg ctcgtccccg tcggtgtagt accgccggtt
     2401 gacctcgagg ccgaagtacc gctcggcgta ggcgatccgc cggtaatgtt cccgcagtcg
     2461 ctcgctgtcg ctccgcagcg cggcgcggcc gtggtcggtc cagaaggcgc ggagccatgc
     2521 cacccgggct tcgccccggg cggtgtcgaa ctcggccagt accgagtcat cggcgatcag
     2581 ggcgagatct tcccgatagg cggcgacgga gacggagtcg tcgaacgcgg cgccggcgta
     2641 gtaggcggca tccccagaag aatcgccgag tgcgagggcg ctggcggcga gctcatgcag
     2701 aggcagcccg gaggagtcgc tggccacgag cgccctggcg gcttcgaccg cgtgccgctg
     2761 gtcgcccact acccgctcaa cccgattgag ggcgagcagg acctccggat cggtc
//
LOCUS       DATIFF010001140         1720 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_605577, whole genome shotgun sequence.
ACCESSION   DATIFF010001140 DATIFF010000000
VERSION     DATIFF010001140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_605577"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            11..>1720
                     /locus_tag="VLD58_16635"
     CDS             11..>1720
                     /locus_tag="VLD58_16635"
                     /inference="COORDINATES: protein motif:HMM:NF022039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 97 catalytic
                     domain-containing protein"
                     /protein_id="HSB55993.1"
                     /translation="MRRPSGFLVPCLVAGAVAAAGSPLRAQVRVASPDGRNQVTVEVR
                     EGRLVYSLERDGRALLLPSRLGFRFRGAPPLGEGVRITDTTRQSHDEWWTQPWGEVAR
                     VREQYNELAVGVEETGGGQADGRSGGQGGGHRRFTLRVRAFDDGIGFRYELPRQPGLD
                     SFAITEELTEFSFADNPRAWWIPSDRPRMDRSEMLYSESPLSLLQRVQTPLTMETRDG
                     RTFIVIHEADLADYARMNLHGSCIECRTLTADLALMGDSIAVRGRTPFVTPWRTIQLA
                     DRATELAPSLLGLKLNPPNRLASTDWIHPMKYVGIWWGMHIGKMTWGSGPNHGATTAN
                     TRRYIDFAAANGFGGVLVEGWNTGWDGDWIKNRDAFSFTQAYPDYDLPALAAYAKQKG
                     VRLIVHNETSGGIENYERQIDSAYALYRSLGLDAIKTGYVTDTISHGDSHWSQRMVRH
                     YRKVIETAAKYGIMLDVHEPLHDTGERRTYPNMMSREGSRGQEYNAWSGDGGNPPEHE
                     TILFFTRLLAGPMDFTPGIFDILRDKSTGTAQRPDQPRVRTTLAKQLALYVVLYSPLQ
                     MAAD"
BASE COUNT          293 a          599 c          566 g          262 t
ORIGIN      
        1 ggaaatcccc atgcgccgcc cttccggctt ccttgtgccc tgccttgtcg cgggtgccgt
       61 tgcggccgcc ggcagcccgc tccgggccca ggtccgcgtg gcctcccccg acggccgcaa
      121 ccaggtcacg gtagaggtcc gcgagggccg gctggtgtac agcctggaac gggacgggcg
      181 cgcgctcctt ctcccgtccc gcctcggctt ccggttccgc ggggcaccac cgctcggaga
      241 gggagtgcgg atcaccgata ccacccggca gtcgcatgac gaatggtgga cccagccctg
      301 gggggaagtg gcgcgggtgc gggagcagta caatgagctg gcggtcgggg tcgaggaaac
      361 ggggggcgga caggcggacg ggcggtcagg cggtcagggc ggcggccacc ggcgctttac
      421 cctgcgggtg cgcgccttcg acgacggcat cggcttccgc tacgagctgc ccaggcagcc
      481 cggcctcgac agcttcgcca tcaccgagga gctgaccgaa ttcagtttcg cggataatcc
      541 ccgcgcatgg tggatcccat ccgaccggcc gcggatggat cgctccgaga tgctctattc
      601 ggagagcccg ctcagcctgc tgcagcgggt gcagacgccg ctcaccatgg agacccggga
      661 cgggcgcacg ttcatcgtca tccacgaggc cgacctggcg gactacgccc ggatgaacct
      721 gcacggctcc tgcatcgaat gccggactct gaccgcggac ctggcgctca tgggcgacag
      781 catcgcggtc cggggcagga cgccgttcgt gacgccgtgg cgcaccatcc agctcgccga
      841 ccgcgccacc gagctggccc cttcgctcct cggcctcaag ctcaatccgc cgaatcggct
      901 cgccagcacc gactggatcc acccgatgaa gtacgtcggc atctggtggg ggatgcacat
      961 cggcaagatg acctggggct cgggtccgaa ccacggcgcc accaccgcga ataccaggcg
     1021 ctatatcgac ttcgcggcgg ccaatggctt tggcggggtg ctggtggaag ggtggaacac
     1081 cggctgggac ggtgactgga tcaagaaccg cgatgccttc tcattcaccc aggcataccc
     1141 cgactacgac ctgcctgccc tcgccgcata cgccaaacag aagggtgtgc ggctcatcgt
     1201 ccacaacgag acctcgggcg ggatcgagaa ctacgagcgg cagatcgatt cggcctacgc
     1261 cctgtatcgc tccctcgggc tcgatgccat caagaccggc tacgtgaccg acaccatctc
     1321 ccacggcgat tcccactggt cgcagcggat ggtgcggcac tatcgcaagg tcatcgagac
     1381 cgcggcgaag tacggcatca tgcttgacgt gcacgagccg ctccacgata ccggcgagcg
     1441 gcgcacctat cccaacatga tgtcccgcga agggtcgcgg gggcaggaat acaacgcctg
     1501 gagtggtgac ggcggcaatc cgccggagca cgagaccatc ctcttcttca cccggctcct
     1561 cgccgggccg atggacttca cgcccggcat cttcgacatt ctgcgggaca agagcaccgg
     1621 gacggcgcaa cgccccgatc agccccgggt gcgcaccacc ctggccaagc agctggcgct
     1681 gtacgtcgtg ctctactcgc cgttgcagat ggcggcggat
//
LOCUS       DATIFF010001141         5487 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_911764, whole genome shotgun sequence.
ACCESSION   DATIFF010001141 DATIFF010000000
VERSION     DATIFF010001141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5487
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_911764"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..659)
                     /locus_tag="VLD58_16640"
     CDS             complement(<1..659)
                     /locus_tag="VLD58_16640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB55994.1"
                     /translation="MPRARLLNLLPLLLAATVACGGDDPAGPGTKGPLELDTGRAAND
                     SIGPAGGTISATGTDGVHYQLIVPPNALRVPTRITITPVRAIRTLPVSGGTLGAMDLQ
                     PSGLAFAVPVQLRITAPTNAPGGMHLVGFSFEAQGDSVTPAVVADSGSFATVLLSHFS
                     GGGAAFGTVLDIANWVQPSGGPLNPSQPFIDSLIVLQVTAPGDLPLQVQVMHDWFTQV
                     I"
     gene            770..3772
                     /locus_tag="VLD58_16645"
     CDS             770..3772
                     /locus_tag="VLD58_16645"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HSB55995.1"
                     /translation="MQHPESPRNRLPAATLAALAFSCLTATLPAAAQLAADPVSHIDH
                     FTVDDGLAQNKVRAVAQDRTGFIWVGTYRGLQRFDGYSFVRYSEIDSAAPPELNGVIQ
                     VIRPGPGQEPLVEAIGGGIFRLDAASGHFQRLPVVNRRPPGTWALDSAGQLWLVREDT
                     LLVLPPDSAAARPVFTAPWLIHTRTLATSRSGALWLWTDDSTGQRLQRLDPVRGAIHR
                     YPSAPLTSYSMLEGGDGRLWVAGYEGALTLSPGADHLEVIHGLEGAQVTMLALDGPHG
                     VLAVADQFLARVDQDGQVTTRWAPPGVFGTGYLPQAFALDREGGIWLATLTAGLFRLE
                     PRTPLFHLLSSRSTPPVPLANDFVTALAEARDSTLWVGTLRGGAYHLDGAGRILASYR
                     HRPQDRSSLPSDEVWDVTLDGSGTVWIATGAGLCAMDPGATHCYGASLPVVDVAPDNE
                     GWFWVASGDEVRSFDPLARRFGPSSERLHGAFTLFVDTVASQLWMGGFELAHQGIRNG
                     RLQDSLQRVRAPRGLGGSIYQFHRDSAGRLWLATDGGLARWDAPPAGGIVLIDPPRLR
                     GVTAFSLVEDASHRFWLGTSHGLVHYWPATGAAQRYARQDGVAGGEFNRRAALRRQNG
                     EFLFGAVEGVVGFFPDQVPGNHLSPPLVFTHSERVTDAGIVEAPLDRSGHLELDRHDR
                     AVTLSFAALAFAASPARRYRFRLEGLSGSDWIETSDHRFTWAAPPPGHYQLRVQAATG
                     EETWGEPGAALAIDVVPPFWRAWWFRLTLALAAAVTLLLLHRLSLGRAVATERLRLRI
                     SHDLHDQIGAGLSSIALLSDAAGTHAAMPEPARTELERIGASARAMVGDLRDIVWAID
                     PGSDRLEELVTRMRDLVPTLLPGLRVRFQAPERGLGHPIGMTVRRDFYLMFKEILNNI
                     ARHARATEVGIELTLAGAYLTLTVTDNGVGFTPDATRPHTGSRSLRDRAARLGASYSV
                     ESAPGQGTTVRVRLAPTRTRHSGPVTPG"
     gene            3782..4447
                     /locus_tag="VLD58_16650"
     CDS             3782..4447
                     /locus_tag="VLD58_16650"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSB55996.1"
                     /translation="MHSPSRAADLRAAVWVVEDSPVYRQTIAGLLDQGARYRCGRHFG
                     DAEEMLEALADGRELPRLLLMDLALPGMSGIEAVRCVRRKKPTIPVVMLTVHQSNDRI
                     FEAICAGASGYLLKSSSRDDLIDGIESVLDGGAAMDAQIARRVLEMFARMATPQADYG
                     LSDREREILQHLVDGATKGMIAERLSLSPHTIDGHVRNIYAKLHVNNRSGAVAKALRE
                     HLL"
     gene            4586..>5487
                     /locus_tag="VLD58_16655"
     CDS             4586..>5487
                     /locus_tag="VLD58_16655"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB55997.1"
                     /translation="MADAPTRLAAALADRYRIERELGAGGMATVYLAQDLKYDRKVAI
                     KVLRPELAAVIGAERFLAEIKTTANLQHPHILPLFDSGVARVEGHGSWVENASKDPRP
                     STLDPETAAYLFYVMPFIEGESLRDRLTREKQLPIGDAIRIAGEVASALDYAHRHNVI
                     HRDIKPENILLHDGRALVADFGIALAASKAGGSRMTETGMSLGTPQYMSPEQAMGERT
                     ITASSDVYSLGCVLYEMLLGEPPFTGPTAQAIVARMMIEKPAPLRARRDPVPEPVERA
                     VLTALQKLPADRFRTAAEFAAALAV"
BASE COUNT          827 a         1953 c         1834 g          873 t
ORIGIN      
        1 atgatcacct gggtgaacca gtcgtgcatc acctgcacct ggagcgggag atcccccggc
       61 gcggtgacct gcagaacgat cagcgagtcg atgaagggtt ggctggggtt gagcggcccg
      121 ccgcttggct gcacccagtt agcgatgtcg agcacggtcc cgaaggccgc cccgccgccg
      181 ctgaaatgac tgagcagaac cgtggcgaag ctgccactgt cggccaccac cgccggggtc
      241 accgagtcgc cctgggcctc gaacgagaac cccaccaggt gcatgccacc tggggcattg
      301 gtcggggccg tgatccggag ctggaccggc accgcgaatg cgagacccga cggctggaga
      361 tccatcgcgc ccagcgttcc accgctcacc ggcagggtcc ggattgcccg caccggggta
      421 atcgtgatcc gggtcggcac ccggagcgcg ttgggcggaa cgatgagctg gtagtgcacc
      481 ccgtcggtgc cggtggccga gatggtcccg ccggcaggac cgatcgagtc gttggccgcc
      541 cggccggtat ccagctccag tggccctttg gtcccggggc cggccggatc atcccctcca
      601 caggctacag ttgcggccag caacaacggc agaagattga ggaggcgtgc gcgcggcatg
      661 gccgaacctg gaatggggtc cgcctaagtt gccggccagc ggccaactcc acatgacgcg
      721 tttgcgtcgg tcgccccgat cacagcagga gtaggttgta aacattccga tgcaacatcc
      781 cgaatcaccc cgaaaccggc tgcccgcggc gacgctcgcc gcgctggcgt tctcgtgcct
      841 gacagccacc ctcccggctg ccgcgcagct ggccgccgat ccggtcagcc acattgatca
      901 cttcaccgtg gacgacggcc tggcccagaa caaggtgcgg gcggtggccc aggatcggac
      961 cgggttcatc tgggtcggca cctaccgcgg gctgcagcgc ttcgacggct attcctttgt
     1021 ccgctattcc gagatcgact ccgccgcgcc accggagctg aacggggtca ttcaggtgat
     1081 ccggccgggg ccgggacagg agccgctggt cgaagccatc ggtggaggca tcttccggct
     1141 cgatgcagcg agcgggcact tccagcgcct cccggtggtc aaccgccggc cgcccggcac
     1201 ctgggccctc gattccgccg gtcagctctg gctggtgcgg gaggacacgc tgctcgtgct
     1261 ccccccggac tccgcggcgg cgcgaccggt gttcaccgcc ccctggctca tccacacccg
     1321 gacccttgcc accagccgga gcggtgccct ctggctctgg accgatgact cgaccggcca
     1381 gcggctccag cgactcgacc cggtgcgtgg cgcgatccat cggtatccct cagcgccgct
     1441 gacttcgtac agcatgctgg aaggtggtga cgggcggctc tgggttgccg gctatgaagg
     1501 agcactgacc ctgagtccag gcgccgatca cctggaggtg atccatggac tggaaggcgc
     1561 ccaggtcacc atgctcgccc tcgatggtcc ccacggagtt ctcgccgtcg cggaccagtt
     1621 cctcgcccgg gtggaccagg atgggcaggt gaccacccgg tgggcgccgc ctggcgtctt
     1681 cggcaccggc tacctgccgc aggcctttgc gctcgaccgg gaaggcggga tctggctggc
     1741 tacactcaca gccgggcttt tccgcctcga accgcgcact cccctctttc accttctctc
     1801 cagccgctcg acgccgccgg tcccgctcgc caacgatttc gtcaccgcgc tggccgaggc
     1861 gcgcgattcc acgctctggg tggggacgct acgtggcggc gcctatcacc tcgatggcgc
     1921 cgggcggatc ctggcgagct atcggcatcg gccgcaggac aggagcagcc tgccctcgga
     1981 cgaagtctgg gatgtgactc tcgatggaag cggtacggtg tggatcgcga ccggcgccgg
     2041 gctctgcgcg atggatcccg gcgccaccca ctgctatggc gcctctcttc cggtggtcga
     2101 cgtcgccccc gacaacgagg gatggttctg ggtcgccagc ggcgacgaag tacggagctt
     2161 cgatcctctg gcccgacgct tcgggccctc gagcgagcgc ctgcatggcg ccttcacgct
     2221 gttcgtggat accgtggcca gccagttgtg gatgggagga ttcgagctgg cgcaccaggg
     2281 cattcggaac ggccggctgc aggacagcct gcaacgggtc cgcgcacccc gtggactcgg
     2341 cggctccatc taccagtttc accgcgattc cgccgggcga ctctggctcg cgaccgatgg
     2401 cgggctggcg cgctgggatg ccccgccggc gggcggcatc gtgctgatcg acccgcccag
     2461 gctccgcggg gtcaccgcgt tctcgctggt cgaggatgca tcccaccgct tctggctcgg
     2521 cacctcgcat ggactggtgc actactggcc cgccactggc gcggcccagc gctacgcccg
     2581 gcaggacggc gtcgcaggcg gcgagttcaa ccggcgtgcg gcgctgcggc ggcagaatgg
     2641 cgagttcctc ttcggtgcgg tggaaggagt ggtgggtttc ttccccgacc aggttccggg
     2701 gaatcacctg tcgccaccgc tggtcttcac ccattcggag cgggtgaccg acgccgggat
     2761 cgtcgaggcc ccgctcgacc ggtccgggca ccttgagctc gaccggcatg atcgcgccgt
     2821 gacgctctcc ttcgccgccc tcgcctttgc cgcctcgccc gcgcggcgct atcgcttccg
     2881 gctcgagggg ctgagtggct cggactggat cgaaaccagc gatcaccgct tcacctgggc
     2941 cgcaccgccg ccggggcact atcagctccg ggtccaggcc gccaccggcg aggagacctg
     3001 gggtgagcca ggggcggccc tcgccatcga cgtggtgcca cccttctggc gcgcctggtg
     3061 gttccgtctc acgctggcgc tggccgccgc cgtcacgctg ctcctgctcc accggctgag
     3121 cctgggccgc gccgtggcga ccgaacgcct ccggctccgg atctcgcacg acctgcacga
     3181 ccagatcggg gcaggcctca gcagcattgc cctcctctcc gacgcggccg gtacccacgc
     3241 cgcgatgccc gagccggccc gaactgagct cgagcgcatc ggcgcctcgg cccgggccat
     3301 ggtgggtgac ctgcgcgata tcgtctgggc catcgacccc ggatccgacc gcctggagga
     3361 actggtcacc cgcatgcgcg acctggttcc gaccctgctc cccggactgc gcgtccgctt
     3421 ccaggcgccg gaacgggggc tgggtcaccc gatcggcatg accgtgcggc gcgatttcta
     3481 cctgatgttc aaggagatcc tcaacaacat cgcgcgccac gcccgagcca ccgaggtcgg
     3541 gatcgaattg acgctggcgg gcgcgtacct gactctcacc gtcacggaca atggggtggg
     3601 attcacgccc gacgcgactc gacctcacac cggctcgcgc agtctccggg atcgggcagc
     3661 ccgcctgggc gcgagctaca gcgtggagag cgcaccagga cagggcacta ccgtgcgggt
     3721 ccggctcgct ccgacgcgaa cgcgtcattc cggtccggtc actccggggt aacttggcgt
     3781 catgcattct ccttctcgcg ccgccgatct ccgggccgcg gtctgggtcg tcgaggacag
     3841 cccggtgtat cgccagacca ttgccgggct gctcgatcag ggcgcccgct atcgctgcgg
     3901 gcgccacttc ggcgacgcag aggagatgct ggaggccctg gccgacgggc gggagctgcc
     3961 ccggctgctg ctgatggatc tggcgttgcc ggggatgagc ggcatcgagg cggtgcgatg
     4021 tgtccgccgg aagaagccca cgatcccggt ggtgatgctc accgtgcacc agagcaatga
     4081 ccggatcttc gaggccatct gcgctggcgc ctccggctac ctgctcaaat cctcctcgcg
     4141 cgacgacctc atcgacggta tcgagagcgt gctcgacggc ggcgccgcca tggacgccca
     4201 gatcgcgcgc cgggtgctgg agatgttcgc ccgcatggca acaccccagg ccgactacgg
     4261 gctctcggac cgggagcggg agatcctgca gcacctggtg gacggcgcca ccaaggggat
     4321 gatcgcggag cggctctcgc tctcgcccca cacgatcgat ggccacgtcc ggaacatcta
     4381 cgccaagctg cacgtgaaca atcggagcgg cgccgtggcc aaggcgctcc gggagcacct
     4441 gctgtagccc tcgctggacc cgctctagcc ccctgccgct gcgactcgta ggtttggtgc
     4501 cttccccacc acggcagcct cttcaccttg ccagccacag accggactcc ggccctcacc
     4561 cgggccgaga cgagaggcgt actcgatggc tgatgcaccg acccggctcg ccgccgccct
     4621 cgccgaccgt taccgcatcg agcgcgagct gggcgccggg ggcatggcta cggtctacct
     4681 ggcccaggac ctcaagtacg accgcaaggt cgcgatcaag gtcctgcggc ctgagctggc
     4741 cgcggtcatc ggcgccgagc ggtttctcgc cgagatcaag accacggcca atctccagca
     4801 tccgcatatt ctgcccttgt ttgattcggg tgtagcacga gtcgagggtc atgggtcatg
     4861 ggtcgagaat gcatcgaagg accctcgacc ctcgaccctc gacccggaga cagccgccta
     4921 cctcttctac gtgatgccgt tcatcgaggg cgagtcgctc cgggaccggc tcacccgcga
     4981 aaagcagctg ccgatcgggg acgcgatccg gatcgccggg gaggtggcga gtgcgctcga
     5041 ctatgcccat cggcataacg tgatccaccg ggacatcaag ccggaaaaca tcctgctgca
     5101 cgacggccgc gccctggtgg ccgacttcgg catcgcgctc gccgcgagca aggccggcgg
     5161 gagccggatg accgagaccg gcatgtcgct cggcacaccc cagtacatgt cgcccgagca
     5221 ggcgatgggt gagcggacga tcacggccag cagcgatgtc tactcgctcg gctgcgtgct
     5281 gtacgaaatg ctgctgggag agccgccgtt cactggtcca accgcacagg cgatcgtcgc
     5341 caggatgatg attgagaagc cggccccgct ccgggcgcgg cgcgaccccg ttcccgagcc
     5401 cgtggagcgc gcggtcctga cagcgctcca gaaactcccc gccgaccgct tccgaaccgc
     5461 ggcggaattc gccgcggcgc tggcggt
//
LOCUS       DATIFF010001142         2934 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1990874, whole genome shotgun sequence.
ACCESSION   DATIFF010001142 DATIFF010000000
VERSION     DATIFF010001142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2934
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1990874"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..569)
                     /locus_tag="VLD58_16660"
     CDS             complement(<1..569)
                     /locus_tag="VLD58_16660"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSB55998.1"
                     /translation="MALTQSLTIGNLRCHLLEGGAQWLDGGAMFGVVPKPLWSKRIAP
                     DERNRIPLGMRCLLIEHPDGLVLVDTALGDKEDPKFLEIYGVRNEGHDPGPTRIEDAL
                     KQAGFKSEDVRWVINTHLHFDHAGGNTLKAPDGEPRLAFPNATYVVQKNELEFARHTN
                     ERTRASYLPPNFEPVAKAGKWRLLEREGP"
     gene            complement(573..1487)
                     /locus_tag="VLD58_16665"
     CDS             complement(573..1487)
                     /locus_tag="VLD58_16665"
                     /inference="COORDINATES: protein motif:HMM:TIGR00573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HSB55999.1"
                     /translation="MIGLGLSAYPERTLVERAMALMLEGPCGADRLARDVMGLKTAPL
                     AVAERLSVAMLGADPRVRQLEDGRWALVAEAGGSPLIEECAFAVVDVETTGSRASTGQ
                     DRVMEVAVVLVHGPRREVVFDSLVNPRMFIPPRIAGLTGISGQMVARAPEFDQVADQL
                     LAVLSGRVFVAHNARFDWGFLMAEMRRARGLGLSGSMLCTVRLTRMLLPELESRGLDH
                     VAHYFGIENPARHRAGGDALVTAQVLERLLLIARERGARTLSDLESICRRRTKLQARR
                     ARQRARKRRRGLIDPDQPPQDPSRPELN"
     gene            complement(1484..2713)
                     /locus_tag="VLD58_16670"
     CDS             complement(1484..2713)
                     /locus_tag="VLD58_16670"
                     /inference="COORDINATES: protein motif:HMM:NF014344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase family protein"
                     /protein_id="HSB56000.1"
                     /translation="MPVDITSEIGQLHSVLVHTPGAELRAVTPGNKGDYLYDDIIQLE
                     TAQKEHRRFVAVLQRFAEVYQVADLLAEALRVPEARESFIQATLDVVPSDHLGRKLHE
                     LDPAALSRLIIEGVEQEGGPFAQALNSVGYVLPPLPNLFFPRDIGMVIGRHAVVGSMR
                     YGARWTEELLIKTLFTYHPRLANEGILYDGSEERRNDYTLEGGDIHVLRPDLLLVGFS
                     ARTSPAAIDHLCEVVFRSTSVTDVLMLVMPKEPTAIHLDMLFTQVDHGLCVVYPPYFV
                     GPERRAVLHRRKGKDVVREMPSFFSALKEVGLPLEPVFAGGTHRSGQDREQWTSGCNF
                     VALKPGMVLSYRRNEATIEALKQAGFRAVSSVDFVAFDDWLDTKHRTVVTIDGDELVR
                     GGGGPRCMTLPLRRAPA"
BASE COUNT          474 a         1006 c         1017 g          437 t
ORIGIN      
        1 atcggtccct cgcgctcgag gagccgccac tttccggcct tcgcgaccgg ctcgaagttg
       61 ggcggcagat agctcgcgcg ggtccgctcg ttggtatgcc gggcaaactc gagctcgttc
      121 ttctggacga cgtaggtggc gttggggaac gccagacgcg gctctccgtc cggcgccttc
      181 agggtgttgc cgccggcgtg atcgaagtgg agatgggtgt tgatcaccca gcggacatcc
      241 tcggacttga accccgcctg cttgagggca tcctcgatcc gggtcggccc gggatcatgc
      301 ccctcgttcc tgaccccgta gatctcgagg aacttcgggt cttccttgtc acccagggcg
      361 gtgtcgacga ggaccagccc atcggggtgc tcgatcagga ggcaacgcat gccgagggga
      421 atccggttcc gctcatcggg ggcgatccgc ttggaccaga ggggcttggg caccaccccg
      481 aacatggccc caccatcgag ccactgggcc ccgccttcga ggaggtgaca gcggaggttg
      541 ccgatggtga gggactgggt gagtgccatg gactagttga gttccggccg ggagggatcc
      601 tggggcggct gatcgggatc gatgagtccg cgccggcgct tccgggcccg ctggcgggcg
      661 cgccgggcct ggagcttggt ccgccgccgg cagatcgact cgaggtccga gagggtgcgg
      721 gcgccccgct cccgcgcgat cagaagcagc cgctccagca cctgggcggt gacgagcgcg
      781 tcgcccccgg cacggtgccg ggcggggttc tcgatcccga agtagtgggc cacgtggtcg
      841 agcccgcggg attccagctc aggcagcagc atgcgggtca gccgaacggt gcagagcatg
      901 ctcccgctca ggcccagccc ccgggcccgc cgcatctccg ccatcaggaa gccccagtcg
      961 aaccgggcgt tgtgggccac gaacacccgg cccgagagca ccgccaggag ctgatccgcc
     1021 acctggtcga actccggggc gcgggccacc atctggcccg agatcccggt gagaccggcg
     1081 atccggggcg ggatgaacat ccgcggattc accagcgagt cgaacaccac ctcgcgccgc
     1141 gggccgtgca ccagcaccac cgccacctcc atcacccggt cctgcccggt ggaggcgcgc
     1201 gacccggtgg tctccacgtc caccaccgcg aaggcgcact cctcgatcag cggcgaccct
     1261 cccgcctcgg ccaccagcgc ccagcggccg tcctcgagct ggcggacccg cgggtcggcg
     1321 ccgagcatcg cgaccgagag ccgttcggcc accgcgagcg gggccgtctt gaggcccatg
     1381 acatcgcggg ccagccggtc ggcgccgcag gggccctcca gcatgagcgc catggcgcgc
     1441 tcgaccaggg tgcgttcggg ataggcggag agtccgagtc cgatcatgcc ggcgcgcgcc
     1501 tcagcgggag ggtcatgcag cgcgggccgc caccaccccg caccagttcg tcaccgtcga
     1561 tagttaccac ggtccggtgc ttggtatcca gccagtcgtc gaacgccacg aagtcgacac
     1621 tcgacaccgc ccggaacccc gcctgcttca gcgcctcaat cgtcgcctcg ttccggcgat
     1681 agctcagcac catccccggc ttgagcgcca cgaagttgca ccccgaggtc cactgttccc
     1741 ggtcctggcc ggagcggtgg gtgccgccgg cgaacaccgg ctcgagcggc agccccactt
     1801 ccttgagcgc cgagaagaag ctcggcatct cgcgcaccac gtccttgccc ttgcgccgat
     1861 ggagcacggc gcggcgctcc ggccccacga agtacggcgg gtagactacg cagagcccgt
     1921 gatccacctg ggtgaagagc atgtcgaggt ggatggcggt gggctccttc ggcatcacca
     1981 gcatcagcac gtcggtcacc gaggtcgacc ggaacaccac ctcgcagaga tggtcgatcg
     2041 cggcgggaga ggtccgggcg ctgaagccga ccagcaggag atcggggcga aggacgtgga
     2101 tgtccccgcc ttcgagggtg tagtcgttgc gccgctcctc ggacccgtcg tagaggatgc
     2161 cctcgttggc gagcctgggg tgataggtga agagcgtctt gatcagcagc tcctcggtcc
     2221 agcgcgcgcc gtagcgcatc gagccgacca cggcgtgccg gccaatcacc atcccgatgt
     2281 cgcgcgggaa gaagagattg gggagcggcg gcaggacata gcccaccgaa ttgagcgcct
     2341 gggcgaaggg cccgccctcc tgctccactc cctcgatgat cagccgcgac agcgccgcgg
     2401 ggtccagctc gtgcagcttc cgtcccaggt ggtcggaggg aaccacgtcg agggtcgcct
     2461 gaatgaacga ctcccgcgct tcgggcaccc ggagcgcctc ggccaggagg tcggcgacct
     2521 ggtagacctc ggcaaaccgc tggagcacgg cgacgaaccg gcgatgctcc ttctgggcgg
     2581 tctcgagctg gatgatgtcg tcgtagaggt agtcgccctt gttgcccggc gtgaccgcgc
     2641 gcagttccgc ccccggggtg tgcaccagga cggagtggag ctggccgatc tcggaggtga
     2701 tgtcgacggg cattgcggga aactagcggg acagcgggaa tgctggaatg cggcggcaag
     2761 gcggcaaggc ggcaaagcgg caagacggcc ggaaaaggtg aacccgacgt cggaatttcc
     2821 cgccaggttt cgccgctgcc gagcggccgc cgcttctctt gacagccgag aggaatcctc
     2881 caatcctctt cctctcgact gccgagagta gccatgcgcg acgaacgttc cgat
//
LOCUS       DATIFF010001143         4565 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2298285, whole genome shotgun sequence.
ACCESSION   DATIFF010001143 DATIFF010000000
VERSION     DATIFF010001143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4565
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2298285"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(107..3253)
                     /locus_tag="VLD58_16675"
     CDS             complement(107..3253)
                     /locus_tag="VLD58_16675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSB56001.1"
                     /translation="MGLAGRIAGRFLHSRLTPLVTLASLAAGVLALIGTPREEEPQIS
                     VPMIDVIAAMPGANPAEIENLLTRPIEQRMWEIPSVEHVYSTAGEGFTLVTVRFRVGE
                     DQDRSITRVHAKLMADTDQLPAGALPPIVKPHAIDDVPILTLTLSARTTGSNQLRQMA
                     VQLADEARTIPDVAQVNVIGGAPRQVRVELDPARLAAAGVTPGEVAMALRGANARLDA
                     GDLTTGDRVYRLEVGAPLSTANEVGSVVVSTRGATVSVRDVAKVEETFGERDSYVTHA
                     SKDSASESAVTISIAKRRGANATVVAHEVLQRVDEVRARLLPPDVQVRETRNYGETAR
                     EKASELILHLAIATLSVTVLVGLFLGWREALVVLVAVPVTLALTLFSYYLLGYTLNRI
                     TLFALIFSIGILVDDAIVVVENIYRHLQLGQKPPAEAAIEGVDEVGNPTILATFTVIA
                     AILPMAFVSGLMGPYMRPIPVGASVAMLASLAVAFIVTPYLGFRLLAGHTGGAPPAEP
                     EQPEAPSRFARVYVPAMRALMERPRIRRLFYGGVLALLVGSMLLVVLRVVQVKMLPFD
                     NKSEFQVILDFPEGTTLETSAAAANEMAAWLRRVPEVRETQVYAGVAAPFNFNGLVRH
                     YFLRRGPNVADVQVNLVPRSERKRQSHAIALSARPGVDSIAARYGASAKLAEIPPGPP
                     VLSTLVAEVYAGDDSTRLAAAREVKRVFETTAGVVDVDWTIESPQTRLRFRIDRVMAA
                     QAGASVEQLVQTVYLAQAGTSAGLAASATAREGIAIVPRLPLERRSSAEALLALPVPT
                     RSGPQPLGRFVHLDSTVQSLSRYHRDLRPVIYVTGDVAGSIESPVYAILAMNQALDTI
                     RVNGEPIARYNAVQPARLDETAIKWDGEWQITIEVFRDLGLAFAAVLVLIYVLVVWWF
                     ESFSIPLVIMAPIPLTLIGILPGHAVTGAFFTATSMIGMIALAGIIVRNSILLVDFVQ
                     LAERRGVPTAQAVIEAGTVRFRPIALTAAAVVVGGLVMVLDPIFQGLAVALISGAIVA
                     TLLTMVVVPLLYWEVSRV"
     gene            complement(3255..4268)
                     /locus_tag="VLD58_16680"
     CDS             complement(3255..4268)
                     /locus_tag="VLD58_16680"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSB56002.1"
                     /translation="MTRTRELTAATLFLVVACGGEPSPAARPAETTPSSQALTIRDTV
                     IVSSFEAVGAAEAVQQATLSTRLMGNVVSVLVHEGDRVQAGATLVRLDAREISSKREQ
                     VEAGIAAAEAVYRDAQTQAARFRSLYADSAATRYQLEQVETGLTRAESGLNTARAARG
                     ELDAVGSYAEVRAPFPGVVTRRHVDPGAFAAPGAPLVEIQDPSRLRVTVSVPAALSAQ
                     LRRGMSIPAKVEGRAAVATIEGVVPSGAGTVYTVNALIENRSGELLAGSAATLAIPAG
                     ERRAILIPVSALVREGDLTGVRVQSPSGAVLRWLRLGEERDGKVEVLSGLGVGDVVIA
                     GAD"
     gene            complement(4265..>4565)
                     /locus_tag="VLD58_16685"
     CDS             complement(4265..>4565)
                     /locus_tag="VLD58_16685"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSB56003.1"
                     /translation="ARAAAEAATAAAGLEAQAARENLDVALAQLAIEVEAVQQATEAH
                     RIVGRKYDGGLATVTELFDAAATETASKLGRDAAAYAALVARAELDRAMGRELVQ"
BASE COUNT          754 a         1651 c         1476 g          684 t
ORIGIN      
        1 gaaaccgacg aacgcggtga agaggaacca ggcggggttg acccaccagc ccagcgccag
       61 cgacaaaagg acgaacgtcc cggcaaagcg ccggatgacc atctcgttac acacggctca
      121 cctcccagta caagagcgga accaccacca tggtcagcag ggtcgccacg atggcgccgc
      181 tgatcagcgc caccgccagc ccctgaaaga ttggatccag caccatcacc agcccgccca
      241 ctaccaccgc cgccgctgtg agcgcgatcg gccggaaccg gaccgtgccg gcctcgatca
      301 ccgcctgggc cgtcggcacc ccacgccgct ccgccagctg cacgaagtcc accagcagga
      361 tcgagtttct cacgatgatt ccggcgagcg caatcatccc gatcatgctg gtcgcggtga
      421 agaaggcccc cgtgaccgca tgcccgggaa ggatgccgat cagggtgagc ggaatcggcg
      481 ccatgatcac caatggaatg ctgaaggact cgaaccacca gaccaccagt acgtagatga
      541 gcaccagcac cgccgcgaag gccagcccga gatcgcggaa gacctcgatc gtgatctgcc
      601 actcgccatc ccacttgatg gctgtctcgt cgagccgggc cggctggacc gcattgtacc
      661 gggcgatcgg ctcgccattc accctgatag tatcgagcgc ctggttcatg gccaggatgg
      721 cgtagaccgg gctctcgatg ctccccgcca cgtcgccggt cacgtagatc acgggccgga
      781 gatcgcgatg gtagcgggag agactctgca ccgtcgaatc gaggtgcacg aaccggccca
      841 gtggctgggg cccgctccgg gtcggcaccg gcagcgccag cagcgcctcc gcgctgctgc
      901 ggcgctcgag cggtaaccgc gggacgatgg caattccctc ccgagccgtg gccgaggcgg
      961 caaggccggc actggtgcca gcctgggcca ggtacaccgt ctgtaccagc tgctccacgc
     1021 tggcaccggc ctgggcggcc atgacgcggt cgatccggaa gcggagccgg gtctgggggc
     1081 tctcgatggt ccagtcgaca tcgaccaccc cggccgtggt ctcgaagacc cgcttcactt
     1141 cgcgcgccgc ggccaggcgg gtgctgtcgt cgccggcgta cacctccgcc accagggtcg
     1201 acagtaccgg cggccccgga ggaatctccg ccagcttggc gctggcgcca tagcgcgccg
     1261 cgatcgagtc cactcccggc cgcgccgaca gggcaatcgc atgactctgc cgcttccgct
     1321 cggagcgggg caccaggttc acctggacat cggcgacgtt ggggccccgc cggaggaagt
     1381 agtgccgcac cagtccattg aagttgaagg gcgcggccac accggcatac acctgcgtct
     1441 cacggacctc cggcacccgc cggagccagg ccgccatctc gtttgccgcg gcggcgctgg
     1501 tctcgagcgt ggttccctcc gggaaatcca gtatcacctg gaactccgac ttgttgtcga
     1561 agggcagcat cttcacctgc accacccgaa gcaccaccag cagcatcgac ccgacgagga
     1621 gcgccagcac tccgccgtag aagagccggc ggatcctcgg ccgttccatg agcgcccgca
     1681 tcgccggcac atagacccgc gcaaaccggc tcggcgcttc gggctgctcc ggctcggcgg
     1741 gaggggcgcc cccggtgtgg ccggcaagca gacggaaccc gaggtagggc gtcacgatga
     1801 acgcgaccgc gagcgaggcc agcatcgcca ccgacgcgcc caccggaatc ggccgcatgt
     1861 agggacccat gagccccgag acaaacgcca tcggcaggat cgccgcgatc acggtgaacg
     1921 tggcgaggat ggtgggattc cccacctcgt cgactccttc gatcgccgcc tcggccggcg
     1981 gcttctgccc cagctggaga tggcggtaga tgttctcgac caccacgatg gcgtcgtcca
     2041 ccagtatgcc gatcgagaag atcagggcga agagcgtgat gcgattgagg gtgtagccca
     2101 ggaggtagta gctgaacagg gtgagtgcca gggtcaccgg caccgccacc agcaccacca
     2161 gcgcctcgcg ccagccgagg aagagcccga ccagcacggt gaccgagagt gtcgcgatcg
     2221 cgagatggag gatcagctcc gaggccttct cccgcgcggt ctcgccgtag ttccgggtct
     2281 cccgcacctg cacgtcgggt ggcagcagtc gcgcacgcac ctcatcgacc cgttgcagca
     2341 cttcatgcgc cactacggtc gcgttggcgc cgcggcgctt ggcgatgctg atggtgacgg
     2401 cgctttccga ggccgagtcc ttgctcgcgt gggtgacgta actgtcacgt tcgccgaacg
     2461 tctcctcgac cttggccaca tcgcggaccg agaccgtggc gccacgggtc gagaccacca
     2521 cactccccac ttcgtttgcc gtggaaaggg gcgctcccac ttccagccgg tacacccggt
     2581 cgccggtcgt gagatcgccc gcgtccagcc gcgcgttggc gccacgcagc gccatggcca
     2641 cctctcctgg cgtgactccc gcggccgcga gccgcgccgg gtcgagctcc acccgaacct
     2701 gtctcggtgc cccgccaatg acgttcacct gggccacatc gggaatggtg cgcgcctcgt
     2761 cggcgagctg aaccgccatc tgccggagct ggttggagcc ggtggtacgg gcggagagcg
     2821 tcagggtcag gatcggcaca tcgtcgatcg cgtgtggttt gacgatgggc ggcaacgcgc
     2881 cagccggcag ctgatcggta tcggccatga gcttggcgtg gacccgggtg atactccggt
     2941 cctgatcctc tccgacccgg aatcgcaccg tcaccagggt gaagccttca cccgcggtcg
     3001 agtagacatg ctcgaccgag gggatctccc acatccgttg ctcgatgggg cgggtcagca
     3061 gattctcgat ctcggccggg ttcgctccgg gcatggccgc gatcacgtcg atcatcggca
     3121 ccgagatctg gggctcctcc tccctcggcg tgccaatgag cgccagcacc cccgccgcga
     3181 gcgacgcgag cgtgaccagc ggcgtaagcc gcgaatggag aaacctcccc gcaatccgtc
     3241 cggcgagtcc catatcagtc ggctccagcg atcacaacgt cacccacccc caggcccgag
     3301 agtacctcga ccttgccgtc ccgttcttcc ccgaggcgga gccagcggag taccgcgccg
     3361 gagggtgact ggactcggac gccggtaagg tccccttcgc gaaccagcgc cgagacgggg
     3421 atcaggatgg cgcgccgctc acccgcaggt atcgcgagtg ttgccgcgct gccggccagc
     3481 agctccccgc ttcggttctc gatcagggcg ttgaccgtgt ataccgtccc cgcgcccgag
     3541 gggacaacgc cttcgatcgt cgccacggcc gcacgcccct ccaccttcgc cggaattgac
     3601 attccccgcc ggagctgtgc cgacagagcg gccggcaccg acacggtcac ccgcagccgc
     3661 gaaggatcct ggatttcgac cagcggggct cctggcgccg cgaaggcgcc ggggtcgaca
     3721 tgacgccgcg tcaccacacc cgggaacggg gcccgcactt ccgcgtagct ccccacggca
     3781 tcgagttcgc cgcgggcggc gcgcgcggtg ttgagccccg actcagcccg agtcaagccg
     3841 gtttcgacct gctccagctg atagcgcgtg gcggcgctgt cggcgtacag cgaccggaag
     3901 cgggccgcct gcgtctgggc gtcgcggtac accgcctccg ccgccgcgat gccggcctcg
     3961 acctgctcgc gcttcgacga gatctcccgc gcatcgagcc gcaccagcgt cgcccccgcc
     4021 tggacccgat cgccctcgtg gaccagcacg ctcaccacat tgcccatgag gcgagtgctg
     4081 agtgtggcct gctgcaccgc ttcggccgcg ccgacggcct cgaagctgct gacgatcacg
     4141 gtatcccgga tcgtcagggc ctggctcgac ggtgtcgtct cggccggtcg cgcggctggc
     4201 gagggttccc cgccacaggc gacgaccagg aacagcgtgg cagcggtgag ttctcgagtt
     4261 cgcgtcattg caccagctcc cttcccattg cacgatcgag ctccgcgcgc gccaccaggg
     4321 cggcataggc cgccgcgtcg cgtcccagct tcgaggcggt ttcggttgcc gcggcatcga
     4381 agagctctgt cacggtggcc agtcctccgt cgtatttccg tcccacgatc cgatgcgcct
     4441 ctgttgcctg ctgcaccgct tcgacctcga tggcaagctg tgccagggca acgtcgagat
     4501 tctcccgcgc cgcctgggct tcgaggcccg cggcagccgt ggctgcctcg gctgcggccc
     4561 gggcc
//
LOCUS       DATIFF010001144         1298 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_605765, whole genome shotgun sequence.
ACCESSION   DATIFF010001144 DATIFF010000000
VERSION     DATIFF010001144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1298
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_605765"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1242
                     /locus_tag="VLD58_16690"
     CDS             <1..1242
                     /locus_tag="VLD58_16690"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HSB56004.1"
                     /translation="SWDGRVYGLDLASGAERWVHRTIGDTLDSRAAGFDRRALQSSPA
                     IAEGQVFVGSRDGGLYALDATTGERRWRFSHRGSWVVGSPAVQDGVVYVGSSDGHFVQ
                     AVDAKSGAEKWRFEAGSNVLSSPTLAAGLLLVGTESTAAPWGDLLAIDQATGALRWRL
                     RMDEAIFSTPAAADSMLYIGTDTGDLLAIGEVNPKLPHLAVYYDSTLAPRNPMPGSRL
                     AREYFGDLGYAVLDGAALSTFLEARIADQAPSVVVFAMEALPERITQDTGTTGAWQRY
                     LHAGGKIVWLGTLPGTAVYDSTGRFLGNDLPLTRPLTGLPVDSIDFNEYPSVPTDEGR
                     RWGLSGRWRGDMPAAPGAVSRVLARDTEGWATVWQIEYRRDRPWAGYVQVFGLGPSAE
                     RLPMVRAVAEYGLTRRVGGEK"
BASE COUNT          183 a          424 c          481 g          210 t
ORIGIN      
        1 tcgtgggacg gccgggtcta cgggctcgat cttgccagcg gagcagaacg atgggttcat
       61 cgtactattg gagacacgct cgactcccgg gcggccgggt tcgaccggcg agcgctccag
      121 agctcgccgg ccattgccga gggccaggtc ttcgtgggct cgcgcgatgg cggcctgtac
      181 gcgctggatg ccaccaccgg cgagcggcgg tggcgcttca gtcaccgcgg ctcctgggtc
      241 gtgggctcac cggcggtgca ggatggggtg gtctacgtgg ggagttcgga cggccatttc
      301 gtgcaggcgg tggatgcgaa gagtggggcg gagaagtggc gattcgaggc gggctcgaac
      361 gtgctctcct cgccgacgct ggcagcgggc ctgctcctgg tgggcacgga atcgaccgcg
      421 gcgccctggg gtgatctgct ggcgatcgac caggccaccg gcgcgctgcg gtggcggctc
      481 cggatggacg aggcaatctt cagcaccccg gcggcggccg acagcatgct gtacatcggc
      541 accgacaccg gcgacctcct cgccatcggc gaggtgaatc ccaaactgcc gcacctcgcc
      601 gtctattacg actccacgct cgctccccgc aatcccatgc ccggctcccg gctcgcacgg
      661 gaatacttcg gcgacctcgg ctacgcagtg ctcgacggcg cggcgctctc caccttcctc
      721 gaagcgcgga ttgccgacca ggcgcccagt gtcgtcgtct tcgccatgga ggcgctgccg
      781 gagcgtatca cgcaggacac tggcaccacc ggcgcctggc agcgctatct ccacgccggc
      841 ggcaagatcg tctggctcgg caccctcccg ggaacggcgg tctacgattc aaccggccgg
      901 ttcctgggca acgacctgcc ccttacgcgc ccgctcaccg ggctccccgt cgacagcatc
      961 gatttcaacg agtatccgtc cgtgccgacc gacgagggcc ggcgctgggg gctctcgggt
     1021 cgctggcggg gagacatgcc ggccgcgccg ggcgcggtga gtcgggtgtt ggcgcgggac
     1081 accgagggct gggccacggt gtggcagatc gagtaccgcc gggatcggcc ctgggccggg
     1141 tacgtgcagg tcttcggact cgggccttcg gcggagcggc tgccgatggt gcgggcggtg
     1201 gcggagtatg ggttgacgag gagggtgggg ggagaaaagt aggcttgggg cttggggctt
     1261 ggggccatgg ttcttagccc ctagccccaa gccacaag
//
LOCUS       DATIFF010001145         1188 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2144680, whole genome shotgun sequence.
ACCESSION   DATIFF010001145 DATIFF010000000
VERSION     DATIFF010001145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2144680"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            91..753
                     /locus_tag="VLD58_16695"
     CDS             91..753
                     /locus_tag="VLD58_16695"
                     /inference="COORDINATES: protein motif:HMM:NF021492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSB56005.1"
                     /translation="MATTVEATTRGQKAAAPADAPWYRDRLRLAVAGAVGLVLVALVA
                     WLVVSSQRRKEEFAARSLNQARAAAEAGNLPLASSELQKLIDSYKGTDAATEAVITLN
                     QVRMVNGQSELAAVSLRDFLAGNPAAQYRAPAYGLLGAAMENAKRFPEAAEAFTNASK
                     AADLEYLKARYLIDAGRSYAAAGKSAEAIAAYREVVQKFPKASSVTEAQVRLAELTDG
                     KM"
BASE COUNT          203 a          393 c          423 g          169 t
ORIGIN      
        1 actgttggcc gcgtgttcga gtcacgccgg gggcattcgg agtccgacgg cacgagccac
       61 acgatcccta ctcaatttct gcggtacgac atggcgacga cggtggaagc gacgacacga
      121 gggcagaagg cagccgcgcc cgcggacgcc ccctggtacc gggaccgact ccggctggcg
      181 gtcgccgggg cggtgggact ggtgctggtc gcgctggtgg cgtggttggt cgtgagcagc
      241 cagcgccgca aggaggagtt cgcggccaga agcctgaatc aggcccgggc cgcggcggag
      301 gcgggcaatc tcccgctggc gtcgagcgag ctgcagaagc tcatcgattc gtacaagggc
      361 accgacgccg ccacggaggc ggtcattacc ctgaaccagg tgcggatggt gaacggccag
      421 agcgagctgg ccgcggtgag cctgcgcgat ttcctggccg gcaacccggc cgcccagtat
      481 cgggccccgg cgtacggcct gctgggggcc gccatggaga acgccaagcg cttcccggag
      541 gccgccgagg cgttcaccaa cgcctccaag gccgccgacc tggagtacct gaaggcccgg
      601 tacctgatcg acgccgggcg gtcctacgcg gcggcgggga agtcggccga ggcgatcgcc
      661 gcctaccgcg aggtggtgca gaagttcccc aaggcctcca gcgtcacgga ggcgcaggtc
      721 cggctggccg agctgaccga cgggaagatg tagggccggg gcgcccctac gggcgggctc
      781 catagtacga gttcattacc cgcatgcgga ccgtcccatg ggtcgggaca cgcgctctcc
      841 tcgtagcctg ctcactcgcg atcgtcaccg cgatcgcgcc ggtcgtgcgc tgcaccgccg
      901 ccgaagatcc ccttcgcttc cgatgtaata cccccctaac gtcgcgggtg gcggtgcagc
      961 gccgcacagc ggcaggggaa catttgaacg gaccttcgaa agaggtacag ctatgcgcag
     1021 gttgtggagc gccgcatcca tcggcggcct ggccctcgtc ggcgcgggcc ggccggttcc
     1081 tctctatgcc cagaggccgt tcgagggcac tatcgcgttc cagatgatca acgcgaaggg
     1141 ggataagccc gacaccatgg tccagacgac caaagggaac aaggtccg
//
LOCUS       DATIFF010001146         1249 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1530389, whole genome shotgun sequence.
ACCESSION   DATIFF010001146 DATIFF010000000
VERSION     DATIFF010001146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1249
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1530389"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..913
                     /locus_tag="VLD58_16700"
     CDS             <1..913
                     /locus_tag="VLD58_16700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56006.1"
                     /translation="TVEMYAVGRPTIRSISLDSAGNRGEPYVIVADRVRMKGNDRTWA
                     GGKVTVDRSDFSARGDSLYLDSGPANAGLLLGNPMMKGLGRDSFELHGRRIALTLENR
                     AITYVKALAQGHAVSSQVDLVADTIGLDVDKQHLVQTIAWGDSIKPRALTSDYEVRGD
                     SLAFDTPEQLLREVRAFGTAFVGGKPDSAGGDRDWMSGDTVIATFTTWDSAGTPRTIL
                     ERLEATGKARSYYRVADRKQPGALPSINYSRGDRITVRMKTGNERGVDRVDIRGQVDG
                     VHLEPVTAPAPADSTRPRSRPGAGKGP"
     gene            910..>1249
                     /locus_tag="VLD58_16705"
     CDS             910..>1249
                     /locus_tag="VLD58_16705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56007.1"
                     /translation="MTDLFDRLAERDPSVPLALAAIAREAGEKGRLDLPALGPSYRET
                     VLAARAEAGESGAELSSDEVHENLTRSVLPRLADEGWIAPSGSDEWTSVQAVGPWWEM
                     VLADRQRARAR"
BASE COUNT          201 a          416 c          460 g          172 t
ORIGIN      
        1 tacggtagag atgtacgcgg tcggccggcc gaccatccgc tccatcagtc tcgattccgc
       61 gggaaaccgg ggtgaaccct acgtgatcgt ggccgaccgg gtgcgcatga aggggaacga
      121 ccggacctgg gccggcggca aggtgaccgt ggaccgcagc gatttctcgg cgcgcgggga
      181 ttcgctctac ctcgacagcg gaccggcgaa cgcggggctc ctgctgggta atccgatgat
      241 gaaggggctc gggcgtgact ccttcgagct gcacggccgg cggatcgcac tcaccctgga
      301 gaaccgtgcc atcacctacg tcaaggcgct ggcgcaaggg cacgcggtga gcagccaggt
      361 ggatctcgta gccgacacca tcgggctcga tgtggacaag cagcacctgg tacagacgat
      421 cgcgtgggga gacagcatca agccccgggc gctcacttcc gactacgagg tccgggggga
      481 ttcgctggca ttcgataccc cggagcagct gctgcgtgag gtacgcgcgt tcgggacggc
      541 gttcgtgggc gggaagcccg acagcgccgg cggcgaccgc gactggatgt ccggtgacac
      601 ggtcatcgcc accttcacca cgtgggattc ggccggcacg cctcgcacca tcctcgagcg
      661 gctggaggcg actggcaagg cgcggtccta ttaccgcgtg gccgaccgga agcagcctgg
      721 cgcgctgccg tcgatcaact actcgcgggg cgatcgaatc acggtgcgga tgaagaccgg
      781 caatgagcgt ggcgtggatc gggtggacat tcgcggccag gtggacggcg tccacctcga
      841 accggtgacc gcgcccgccc cggcggacag cactcgaccg cggagccggc ccggcgcggg
      901 gaagggccca tgaccgacct cttcgaccgc ctggccgagc gcgacccgtc cgtgcccctg
      961 gccctggctg ccatcgcacg cgaggcaggg gagaagggcc ggctcgatct gcccgccctc
     1021 gggccttcct atcgggagac agtgctggcc gcccgggcgg aggccggcga gtccggagcc
     1081 gagctgtcca gtgacgaggt gcacgagaac ctgacccgct cggtgctgcc acgcctggcc
     1141 gacgaaggct ggatcgcccc cagcgggtcg gacgagtgga cctcggtgca ggcggtcggc
     1201 ccctggtggg agatggtcct ggccgaccgg cagcgcgccc gggcccggc
//
LOCUS       DATIFF010001147         4342 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1991321, whole genome shotgun sequence.
ACCESSION   DATIFF010001147 DATIFF010000000
VERSION     DATIFF010001147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4342
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1991321"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..242
                     /locus_tag="VLD58_16710"
     CDS             <1..242
                     /locus_tag="VLD58_16710"
                     /inference="COORDINATES: protein motif:HMM:NF012720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HSB56008.1"
                     /translation="SPSKNPLGGSAQFGATFFGITGLHLLHVTCGVLAILVIALLVRR
                     GKLTAGHVETTGLYWHFVDLVWMFVFPLVYLMNAR"
     gene            239..550
                     /locus_tag="VLD58_16715"
     CDS             239..550
                     /locus_tag="VLD58_16715"
                     /inference="COORDINATES: protein motif:HMM:NF015582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C oxidase subunit IV family protein"
                     /protein_id="HSB56009.1"
                     /translation="MTTTPQPRHGPTMQVYVMVWIGLVCIVGAEVLLAYAHLRTGVLL
                     ACLLALALVEAGVGLLFFMHLKYERARLAWWLIPVLLFVFLLMDHLWPDAFRLAAMRG
                     P"
     gene            753..1397
                     /locus_tag="VLD58_16720"
     CDS             753..1397
                     /locus_tag="VLD58_16720"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSB56010.1"
                     /translation="MSHVFALLTLFALNFGGWAVITVENLPDQVVVGQAVTLDFTVRQ
                     HGHTLLSNLNARVVAEAGGDRVSAVAQPGASEGRYRATVTLPHAGAWSITIYSGFGNS
                     NVTLLPLAAVGPGRAVAALPATERGRQLFVAKGCVTCHVHPEVSGSGVVKVGPDLTGR
                     RFTGDYLQRFLADPTIATTRGPGGFEMPNLNLAPREIAALAAFINGETAVQTGQ"
     gene            1405..2292
                     /locus_tag="VLD58_16725"
     CDS             1405..2292
                     /locus_tag="VLD58_16725"
                     /inference="COORDINATES: protein motif:HMM:NF019615.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSB56011.1"
                     /translation="MNPCRCPGNFRQVNRDSDYSRTINRHYGVGDLSARILERLRAAG
                     KDPATITRDDLAAFDEFHTGGRESTRDLARLAGIRPGMRVLDVGSGIGGPARTLAAEY
                     GAAVVGLDLTEEFCLAATTLTALVGLADRVTFRHGDALAMPFEDGRFDVVWSQNSIMN
                     VPNHARLFAEMHRVLVPGGTLALEAVFAGPVEGVIFPTFWASAPELNFLMAPAAARAL
                     LGTAGFREVRWEDTTADTLDHARRRRPPPPAPETAPALGRDTIVLEDVARKIENAVRN
                     LEEERIVTVRAVLRRGVVL"
     gene            2346..2999
                     /locus_tag="VLD58_16730"
     CDS             2346..2999
                     /locus_tag="VLD58_16730"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0016018 - cyclosporin A binding [Evidence
                     IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSB56012.1"
                     /translation="MRRPVIVLVILGSVLVSCKKRPEQPATPPATGTSLDPTSPQMQA
                     TAPATYRARFETSAGTFTVEVTRAWAPLGADRFYNLVRNGFFDGGRFFRVLPGFVVQF
                     GLPGDPAVAAQWRPATIPDDPVVQHNTRGTLTFATGGPATRTTQVFINYGNNVQLDAM
                     GFSPLGRVVEGMDAVDHIYAGYGEQPDQGMIQMRGNAYLAAQFPRLDSIAHATIVTP"
     gene            3008..3142
                     /locus_tag="VLD58_16735"
     CDS             3008..3142
                     /locus_tag="VLD58_16735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56013.1"
                     /translation="MRACIPAVALALGACATGSTLRSGVGDRIPEVELPDGRRITAER
                     "
     gene            complement(3126..>4342)
                     /locus_tag="VLD58_16740"
     CDS             complement(3126..>4342)
                     /locus_tag="VLD58_16740"
                     /inference="COORDINATES: protein motif:HMM:NF014026.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HSB56014.1"
                     /translation="VTVPTEALRPGLTGEYFDNIGLEGRPLIVRRDERVDFGWTLSSP
                     GAGMARDWYSVRWTGTLTVPAGGARRIGVEGSDGFRLYLDDSLLIDDWQKRSAGTHLA
                     AVTLTGGSTHMLRLEFFETTGNAHVRLAWDAGVMDDWRTQVDSAVRLARRSEVAVVVA
                     GVEEGEFRDRAFLGLPGHQEELIREVAATGTPVVVAIVGGSAVTMPWLEQVDGVLDVW
                     YPGVVGGQAVADVLFGEADPGGRLPVTFPIAEGQLPLVYDHKPTGRGDDYLDLTGQPL
                     FPFGFGLSYTAFTYSGLVIEPATIGPGRSAVVRCRVKNVGGRAGDEVVQLYLRDELAS
                     VPRPVLQLAGFQRVRLAPGEEREITFRLGPEQLRLLDRDLKWVVEPGTFRVLLGGSSK
                     DLRLRGMLTVQP"
BASE COUNT          659 a         1585 c         1417 g          681 t
ORIGIN      
        1 ggagcccttc caagaaccca ctgggcggct ccgctcaatt cggcgctacg ttcttcggga
       61 tcacgggact tcacctgctg cacgtgacct gcggcgtgct cgccatcctg gtgatcgccc
      121 tgctcgtccg ccgcggcaag ctgacggcgg gccatgtgga gaccaccggg ctgtactggc
      181 acttcgtgga tctggtctgg atgttcgtgt tccccctcgt ctacctgatg aacgcccgat
      241 gaccacgact ccacagcccc ggcacggacc gacgatgcag gtctacgtca tggtgtggat
      301 cggcctggtc tgcatcgtgg gcgccgaagt gctgctggcc tacgcccacc tgcgcacagg
      361 agtgctgctt gcatgcctgc tggccctggc gctggtcgag gccggcgtcg gcctgctctt
      421 cttcatgcac ctgaagtacg agcgcgccag gctggcctgg tggctgatcc cggtgctgct
      481 cttcgtcttc ctcctcatgg atcacctctg gcccgacgcg ttccggttgg ccgcgatgcg
      541 ggggccctag gcgcatcgtg gatcatccca tggcctctct cctgggtggc atggtcctgc
      601 tgacggtggt gtcctttctg gtggtcgccg gcatcgccct catggcctat cgcagacggg
      661 acaagagctc ccgggactga acccctcgcg tcggggtcca aacccgggcc cacgcggcgg
      721 catccaagct ccaaacctcg atggaggatc ggatgtcgca cgtattcgcg ctgctcaccc
      781 tgttcgcgct caacttcggc ggctgggcag tcattacggt cgagaacctg ccggaccagg
      841 tcgtggtagg ccaagccgtc accctcgact tcacggtgcg ccagcacggg cacacgctcc
      901 tctccaacct gaacgcccgg gtggtcgccg aagccggtgg cgaccgggtg agcgccgtgg
      961 cgcaaccggg tgcttctgag ggtcggtacc gcgcaaccgt cacgctgccg cacgccggcg
     1021 cctggtcgat caccatctac tccggattcg ggaacagcaa cgtcaccctg ctgccgttgg
     1081 cggcggtcgg ccccgggcgg gcggtggcgg cgctccccgc gaccgagcgg ggccggcagc
     1141 tcttcgtggc gaaggggtgc gtcacctgtc acgtgcaccc tgaggtgtcg ggaagcggag
     1201 tcgtgaaggt cgggccggac ctgaccggtc gccgattcac gggagactac ctgcagcggt
     1261 tcctggccga cccgaccatt gccaccacgc gcgggccagg tggattcgag atgcccaatc
     1321 tgaacctcgc gccgcgggaa atcgccgcgc tggccgcgtt catcaacggg gagacagcgg
     1381 tgcagacggg gcagtagctc gggcttgaac ccctgtcgct gtcccggcaa cttccgccag
     1441 gtgaaccggg acagcgacta ctcgcgcacc atcaatcgtc attacggcgt cggcgacctg
     1501 tcggcccgga tcctcgagcg gctccgggcc gccgggaagg accccgcgac gatcacgcgc
     1561 gacgatctcg cggcgttcga cgagtttcac accggcgggc gggagtccac gcgagatctg
     1621 gcccgtctcg ccggtatccg gcccggcatg cgagtgctgg acgtcggcag cgggatcggt
     1681 gggccggcgc gcacgctcgc ggccgagtac ggcgcggcgg tggtgggact cgacctgacc
     1741 gaggagttct gcctcgccgc caccaccctg accgcgctgg tggggctcgc cgaccgggtg
     1801 acgttccggc acggcgacgc tctcgcgatg ccgttcgagg atggtcgatt cgacgtcgtc
     1861 tggtcgcaga acagcatcat gaacgttccc aaccacgccc gcctgttcgc cgagatgcat
     1921 cgcgtcctcg taccgggcgg cacgctcgcg ctcgaggccg tgttcgccgg cccggtcgag
     1981 ggcgtgatct tcccgacctt ctgggcctcg gcgccggagc tgaacttcct catggccccg
     2041 gctgcggcgc gcgcgctgct cgggaccgcc ggattccgcg aggtgcgctg ggaggacacc
     2101 accgcggaca ccctcgatca tgcccgccgg cgccggccac ctccgcctgc gcctgagacg
     2161 gcccccgccc tgggccgcga taccatcgtg ctcgaggacg tcgcacggaa gatcgagaac
     2221 gcggtgcgca acctggagga ggagcggatc gtgacggtcc gggccgtcct gcgccgcggc
     2281 gtggtgctgt aactttcctt ttcgatagca agagccgtct gaccccgaaa gagaggactc
     2341 ggcgcatgcg acgccccgtg atcgtgctcg tcatcctggg gagcgtactc gtctcctgca
     2401 agaagcgccc ggagcagccc gccacaccac cggcaaccgg cacctcgctc gatccgacct
     2461 cccctcaaat gcaggccacg gcgcccgcca catatcgcgc gcggttcgag acgagcgcgg
     2521 ggactttcac cgtcgaggtg acccgcgcct gggcgccgct gggcgccgat cgcttctata
     2581 acctggtgcg caacggcttc ttcgacgggg ggcggttctt ccgcgtcctg ccggggttcg
     2641 tggtgcagtt cggcctcccc ggcgacccgg ccgtcgcggc gcagtggcgg cctgccacga
     2701 tccccgacga tcccgtcgtc cagcacaaca cccgcggcac cctcaccttc gcgaccggag
     2761 gaccggccac gcgcacgacg caggtgttca tcaactacgg caacaacgtg cagctggacg
     2821 ccatgggatt ctcgccgctg ggacgcgtgg tggagggcat ggacgcggtg gaccacatct
     2881 acgcgggcta tggcgagcaa cccgatcagg ggatgatcca gatgcggggc aacgcgtatc
     2941 tggccgccca gttcccacgg ctcgattcca tcgcgcacgc gacgatcgtc acaccgtagg
     3001 aggccacatg cgagcgtgca tcccggcggt ggctctcgcg ctcggcgcct gcgccacggg
     3061 ttccaccctg cgcagcggcg tcggcgaccg gatccccgag gtggagctcc ccgacgggcg
     3121 ccgcatcacg gctgaacggt gagcatcccc cgcaatcgga ggtccttcga ggagccgccg
     3181 agcaggacgc gaaacgtccc cggctccacc acccacttga ggtcgcggtc gagcaaccgc
     3241 agctgctcgg gtcccagccg gaaggtgatc tcccgctctt cccccggggc gagccgcacg
     3301 cgctgaaacc ccgcgagctg gagcacgggg cgcggcaccg aggccaattc gtcgcggaga
     3361 tagagctgca ccacctcgtc ccccgccctt cccccgacgt tcttcacgcg gcaccggacc
     3421 accgcgctcc tccccggccc aatcgtggcc ggctcgatca cgagtcccga gtaggtgaac
     3481 gccgtgtagg agagaccaaa cccgaacgga aagagcggct gcccggtgag atcgagatag
     3541 tcgtccccgc ggccggtcgg cttgtggtcg tagacgagcg gcagctgccc ctccgcgatg
     3601 ggaaacgtga cggggagccg cccgccggga tcggcctccc cgaacagcac atcggccacc
     3661 gcctgccctc ccaccactcc cggataccag acatcgagca cgccgtccac ctgttcgagc
     3721 cagggcatcg taacggcgct gccgcccacg atggccacca ccaccggcgt accggtggcg
     3781 gcaacctccc ggatcaactc ctcctggtgc cccggcaagc cgaggaaggc ccgatcccgg
     3841 aactctccct cctcgacacc agcgacgacg accgcgacct cgctccgccg tgccagacgc
     3901 acggcactgt ccacctgcgt gcgccagtcg tccatcacgc ccgcgtccca cgccagccgc
     3961 acgtgggcgt tgcccgtcgt ttcgaagaac tcgagccgca gcatgtgtgt gctgcccccg
     4021 gtgagcgtca cagcggccag atgcgtcccg gccgaccgct tctgccagtc gtcgatcagc
     4081 aggctgtcgt cgaggtagag ccggaagccg tcgctgccct cgaccccgat acgccgggcg
     4141 cctcccgccg gcacggtgag cgtgccggtc catcgaaccg agtaccagtc ccgggccatg
     4201 ccggccccgg gagatgagag cgtccacccg aagtccaccc gttcatcgcg gcgcacgatc
     4261 aacggccggc cttcgagccc aatgttgtcg aagtactcgc cggtcaaccc cggtcgcagc
     4321 gcctcggtcg gcacggtcac ca
//
LOCUS       DATIFF010001148         2999 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1991330, whole genome shotgun sequence.
ACCESSION   DATIFF010001148 DATIFF010000000
VERSION     DATIFF010001148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2999
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1991330"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..972)
                     /locus_tag="VLD58_16745"
     CDS             complement(<1..972)
                     /locus_tag="VLD58_16745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56015.1"
                     /translation="MTVRPLTRWLIAGATVLLVAPLAAQDTTHAPEGVRIGIEYRPGT
                     RPSVVVLPGPGLDSARAIVARDLDYSDRFEVITLGPRDTTVVAVNPGGRTLDYALFRT
                     LGAAYAVELAPDGPGVQVRLHDVTTGVVRREQRFTLPPQFDINARISVHKVSDEIVRW
                     ITGTPGYAASRLLFLIDRRLYRVDSDGGGVTSISAPGEDVLSPTWSPDGRRFAYTRFA
                     GGKGSLVLQGVAAGDKTVVTGTNLLLNITPAFSPDGRLLAFARSGEDGTDIFTADVAQ
                     NCCVQRLTVGRYSDNLSPTFAPDGRRIAFVSTRAGAPQIYVMAADGTD"
     gene            complement(969..1661)
                     /locus_tag="VLD58_16750"
     CDS             complement(969..1661)
                     /locus_tag="VLD58_16750"
                     /inference="COORDINATES: protein motif:HMM:NF024503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB C-terminal domain-containing protein"
                     /protein_id="HSB56016.1"
                     /translation="MRERLVAGREPAGVAIGLTGTVVIHAAALFLLWSTVKAVEMGPP
                     AYAVELVAAPAPPPEEKPAPEAVSRPPAEEPAPNKPAPKTEKPAPPKPKPTTKPTEKA
                     EPTPKASTPTRPLPGETPGTGADAVTVSTPGLSFPFPDYLRNIVQEVYRRWERPLGNA
                     ALRAEVSFLILRDGSVREIRLTRPSGVFSFDLSAQGAIEQAGRSGAFGALPDGWPADV
                     LPVSFYFTPRTQ"
     gene            complement(1658..2092)
                     /locus_tag="VLD58_16755"
     CDS             complement(1658..2092)
                     /locus_tag="VLD58_16755"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HSB56017.1"
                     /translation="MAWGVGQGGGLRGHGELPLSADINVTSLVDVAFVLLIIFMITAP
                     IMQGGVDVELPRAEARPIPAKEGMVVSVNQNGQIFIDETRVSLNDFRMTFGALVKSRR
                     PKSVYLRADRRVPYGNVVQVLAVIRTSGITDVGLVAEEEERP"
     gene            complement(2092..2811)
                     /locus_tag="VLD58_16760"
     CDS             complement(2092..2811)
                     /locus_tag="VLD58_16760"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HSB56018.1"
                     /translation="MLAMLQAGSSLPSSSWDLVLHSSVETKVVLVITLVFSLVAWFII
                     GLKFWQFRRVRGQANRFFGVLERTTRLREAYHAVMKLPPSPYTRIFREGLSFFADLRP
                     GLLRDDAGGATGTLTTTQLEALKMVLGKEVAAERDLMARFISWLATIGSVSPLLGLLG
                     TVLGVMDAFIGIAAKGSGNIGAVAPGVAEALVTTVAGLATAIPAVMAYNLFANRLGVF
                     AGELEGFANEMIGTMAREGML"
BASE COUNT          512 a         1013 c         1027 g          447 t
ORIGIN      
        1 atcggtccca tcggcggcca tgacgtaaat ctgcggcgca cccgcgcggg tcgagacgaa
       61 agcgattctg cgaccgtccg gggcgaaggt gggggaaaga ttatcggagt agcgacccac
      121 ggtcaaccgc tgcacacagc agttctgcgc gacatccgcg gtgaagatgt cggtgccgtc
      181 ctcgcccgaa cgcgcaaagg cgagcagccg gccgtcagga gagaaggcgg gggtgatgtt
      241 gaggagcagg ttggtccccg tcacgacagt cttgtcgccc gccgccacgc cctggagcac
      301 caggctcccc ttcccgcccg cgaaccgggt atacgcgaag cgccgtccat cggggctcca
      361 cgtgggtgag agcacatcct cccctggcgc ggagatgctt gtgacgccgc cgccgtcgct
      421 gtcgacgcga tagagcctcc ggtcgatcag gaacaggagg cgcgacgccg catagccggg
      481 cgtgccggtg atccaccgaa cgatctcgtc cgacaccttg tggaccgaga tgcgcgcgtt
      541 gatatcgaac tgcggcggca gggtgaagcg ctgctcccgc cgcaccacgc ccgtggtgac
      601 gtcatgcagc cgaacctgca ccccgggacc atcgggcgcg agttccaccg cataggcggc
      661 gcccagcgtc cggaagaggg cataatcaag ggtccgtccg ccgggattca ccgccacgac
      721 cgtcgtgtcg cgcgggccca gcgtgatcac ttcgaatcgg tcgctgtagt cgaggtcgcg
      781 cgccacgatc gcgcgggccg agtcgagccc cggtccgggc agcaccacca ccgagggccg
      841 ggtgccggga cggtactcga tgccgatccg gaccccttcg ggcgcgtggg tggtatcctg
      901 ggcggcgagc ggagcgacca gcagcacggt cgctcccgcg atcagccacc gggtcaaggg
      961 gcgaacggtc attgggtcct gggagtgaag tagaacgaca ccgggagcac atcggcgggc
     1021 cagccatcgg gcaatgctcc gaaggccccg gagcggccgg cctgttcgat ggcgccctgg
     1081 gccgagaggt cgaacgagaa gacccccgac ggacgggtca gacgaatctc ccgcactgag
     1141 ccgtcccgca atatgaggaa gctcacctcc gcccggagag ccgcgttccc cagcggccgc
     1201 tcccagcggc gatagacctc ctgtacgatg ttccgaaggt agtccggaaa ggggaagctg
     1261 agtcccggcg tgctcaccgt caccgcatcc gcgccggtgc cgggtgtctc tccagggaga
     1321 ggacgggtcg gggtgctcgc cttgggggtg ggctccgcct tctccgtcgg cttggtggtc
     1381 ggcttgggtt tggggggcgc cggcttctcc gtcttggggg ccggcttgtt gggcgccggc
     1441 tcctccgccg gtggccggct cacggcctcg ggcgcgggtt tctcctcggg cggtggcgcc
     1501 ggcgcggcca ccagttcgac cgcatacgcc ggcgggccca tctccaccgc cttcaccgtg
     1561 ctccagagca ggaacagcgc ggcggcatga attacgacgg tgcccgtcag cccaatggcg
     1621 acacccgcgg gctcgcgacc cgccaccaac cgctctctca cgggcgctct tcttcctcgg
     1681 ctacgagccc cacatcggtg atgcccgagg tccggatgac cgcgagcacc tgcacgacgt
     1741 tgccgtaagg cacccggcgg tcggccctga ggtacaccga cttgggcctt cggctcttca
     1801 ccagcgctcc gaacgtcatc cggaaatcgt tcagcgacac ccgggtctcg tcgatgaaga
     1861 tctggccgtt ctggttgacg ctcaccacca ttccctcttt cgccgggatg ggccgtgcct
     1921 cggccctcgg cagctccacg tcgacgccgc cctgcatgat cggcgcggtg atcatgaaga
     1981 tgatgagcag cacgaaggcc acgtccacca gtgaggtgac gttgatgtcg gccgagagtg
     2041 gcagctcacc gtgcccgcgg agtcctccgc cctgccccac accccaggcc atcagagcat
     2101 cccttcgcgc gccatggtcc cgatcatttc gttggcgaac ccttcgagtt cgcccgcgaa
     2161 aacgcccagc cgattggcga agaggttata ggccatcacc gcgggaatcg cggtggccag
     2221 acccgccacg gtggtcacca gcgcctcggc gacacccggt gcgaccgcgc cgatgttgcc
     2281 ggagcccttc gccgcgatgc cgatgaaggc gtccatcacg cccagtaccg tgcccagcag
     2341 gccgagcagc gggctcaccg agccaatggt ggcgagccag gagatgaacc gcgccatcag
     2401 atcgcgctcg gctgcgacct ccttgccgag caccatcttg agcgcctcga gctgggtggt
     2461 ggtcagggtg ccggtggccc cgccggcatc atcccgcagc agcccggggc gcagatcggc
     2521 gaagaagctg agcccctccc ggaagatgcg ggtatagggc gacggtggca gcttcatcac
     2581 ggcgtgatac gcttcgcgga gccgggtggt gcgctccaac acaccgaaga agcggttggc
     2641 ctggcctcgc acccggcgga actgccagaa cttgaggccg atgatgaacc aggccaccag
     2701 cgagaagacc agggtgatca cgagcaccac cttggtttcg acactggagt ggaggacgag
     2761 gtcccacgac gacgaaggca gcgatgaacc ggcctgaagc atggcgagca ttcccgcggg
     2821 tcaagagtcg gagggaacta tagccgcaag agtggaccgg ccgggagcgg gtcaggcaaa
     2881 aaagtgccgg gccccttgga aggggcccgg cggggagatg cgccaactga gtggacttcc
     2941 acgtcctcag gacgggagct tggcgatctg gcggacctcg gtgccgggca cgatgtccg
//
LOCUS       DATIFF010001149         6518 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1375880, whole genome shotgun sequence.
ACCESSION   DATIFF010001149 DATIFF010000000
VERSION     DATIFF010001149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6518
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1375880"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1150)
                     /locus_tag="VLD58_16765"
     CDS             complement(<1..1150)
                     /locus_tag="VLD58_16765"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSB56019.1"
                     /translation="MASPEIDLTVYPDECDAYGHLNQASFLALFERARWEVIARGPGM
                     DFFTRLGMWPVVRKSVVEYHAPAFPGDVLRFSQILVHLGRTSFTLRQTARRLRDEALL
                     ATAELVFVCVNGQSAPVPVPEALPQVLAERPLPGNLRRVAVNGVNIAVDVRGQGPAIL
                     FIHGFPLDHSIWEYPVAKLEGWMRIAPDLRGMGQSDAPDLGYSMSTYAQDLLALLTAL
                     GVDKAVVCGHSMGGYIAFEMVRQARERIRALVLVGTRGEADSPEVRKARDTAAAQARD
                     GGAEAIAASMLPRMIAAQSREGKPGLADRVHRIMASTPVAGMLGAIGAMRDRPDSFPL
                     LRGLEGLPVLVLVGDEDEMIPVERSQAMIEVLPQGSLSIVSGAGHIPAI"
     gene            complement(1126..2241)
                     /locus_tag="VLD58_16770"
     CDS             complement(1126..2241)
                     /locus_tag="VLD58_16770"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HSB56020.1"
                     /translation="MVDGAITFPKEDGELQSTSSEARTVPSSLPLLERLSAPVPRRPL
                     GTFPSPVEHHPELARALGLEELTLKRDDRNSGTLGGNKLRALEFLLPQLPASVVTMGG
                     YGSTWAATLATFGRAGGLSVHLALFPQPWTQSVAASLAVSLTEGTVYPASSRVALLGA
                     IARAWRGAARHGAVRWVAAGGAEPWGVLGSINAGLELARQIEQGVLKPPAGIVVPLGS
                     GGTAAGLLLAAWIAGLDLAVCAVRVTDPWFANRLTVMGLVRRTRRLLRQLGLSVTPGA
                     ARLLVVKDQLGGGYGRSTAGSRDAVGLAATAGLHLEETYGAKAFAALESLAPSFARLC
                     FWHTFDARLVAALPLDHPLLRQARLHAESLWPHPKLT"
     gene            2279..3415
                     /locus_tag="VLD58_16775"
     CDS             2279..3415
                     /locus_tag="VLD58_16775"
                     /inference="COORDINATES: protein motif:HMM:NF013755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HSB56021.1"
                     /translation="MSDLYLERQADFDAFAESIAQAPLLAVDTEAASFHRYRDRVYLI
                     QLSTRDRTAVVDPLTVTNLSALGRLLEHPGIEVIFHDADYDLRILDRDYGFHASELFD
                     TRIAAQLLNEPGIGLAALLEKYLGVTLDKKYQRADWSVRPLTPEMLAYAASDTKYLPR
                     LRDILRERLAEKGRWSWAEEEFDLLKRVRWAPSGPPEEAYLRLKGARSLRGHELAVLR
                     ELFAWREQAASQLDRAPFRILQNEAMLAIAKAMPADPTALRELKVLSPDQLRRRGNEL
                     LEAVARGVGAPASSLPVFERTKRPAPDLAFDARLERLKQVRNAVAERIELAPGVLCPN
                     GLLEAIARLVPRSTAQLSEIPEMRRWQREVLGPELLAAVPQQEP"
     gene            complement(3417..3719)
                     /locus_tag="VLD58_16780"
     CDS             complement(3417..3719)
                     /locus_tag="VLD58_16780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein"
                     /protein_id="HSB56022.1"
                     /translation="MVQTEETIRKALRGVKDPELNLNIIDIGLVYEVEVEESGAVHVR
                     MTLTSPGCPAGAEIVGDVKRTVEELEGVTSADVEIVWEPYWTPERMDPRVRAFLGG"
     gene            complement(3779..4885)
                     /locus_tag="VLD58_16785"
     CDS             complement(3779..4885)
                     /locus_tag="VLD58_16785"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HSB56023.1"
                     /translation="MAATTASVAQAQSFGLADSIVESGIRRGIYPGAVLVIGNRDRIL
                     HARGFGHLEWKAGPSPSPDSTFWDLASLTKIVGTTGAVMRLIESGRIDLNAPVVRYLP
                     RFQGAGKDAVTVRMLLNHTSGLRSYLPFFQLARTRDSAIALLYREPLRRKPGAAPEYS
                     DLNFLLLGLMVEQVTGQPLEQFVTREVLRPAGLLHTFYRPPDSLRKRTAPTGRYRGHP
                     VCCEVNDQNAVRMGGVAGHAGLFSTGADLARFARLWLNRGFVDGQRVFSPAIIDTFLS
                     TAQGKGDRLLGWERPDPANRDDSAYGHLLSPTAYGHTGWTGTLMWIDPGQNIFLVLLT
                     NRSYDPKVGRSIRALRSVRNDLADQVVRTMTAPR"
     gene            complement(4915..5724)
                     /locus_tag="VLD58_16790"
     CDS             complement(4915..5724)
                     /locus_tag="VLD58_16790"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF012630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031012 - extracellular matrix [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HSB56024.1"
                     /translation="MARRLLAAILAILLALVVFARLGNLRPGAVTAGASSPPALPELT
                     LAPSRGERQSRASIELPTDLVTPLDSLTRLTVRLRLTGEPERHYLDSLVTGADSIVRR
                     WTATQRAVTYAIVPGGAPGFVPEMVHEARWALDTWSPAAIGLNLAEVTDTAAAALVIR
                     WADTLSGDRAGFTDITWDRAGRIRHAEVYLGTRSPNTGRPLLPEARRAVALHEIGHAL
                     GLPHSPDRDDVMFPIATVFEPSERDRFSLRLLYELPTGWVGTGSAQPVTQH"
     gene            5839..>6518
                     /locus_tag="VLD58_16795"
     CDS             5839..>6518
                     /locus_tag="VLD58_16795"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HSB56025.1"
                     /translation="MASIISRALIRWRWVIILFWAAIGYFAAEKAPQVEQALNVRGGT
                     REPTEASRAEQVLRDRFSRSINDFFVVVVRTNAGQADSSPVVDTLAHRLEQIPWVSTV
                     ATFKSTNDSTFLSKDGHQTLMVVAMRATRGDSVASFVVPLRDQIRQAVKLSHTDTTTT
                     TIRLTGRSALDLDVRSVVASDSRRGEIRLLPLTAGILLLAFGALVAAILPLIVGFMAI
                     WITLAIVVV"
BASE COUNT         1127 a         2125 c         2298 g          968 t
ORIGIN      
        1 cgatggccgg aatgtgaccg gcgcccgaga caatggagag gctgccctgg ggcagcactt
       61 cgatcatcgc ctgggaccgt tccacgggga tcatctcgtc ctcgtcgccc accagcacca
      121 gcaccggcag tccttcgaga ccgcggagca ggggaaagct gtcggggcgg tcgcgcatcg
      181 cgccgatcgc gccgagcatc ccggccaccg gggtggacgc catgatgcgg tggacccggt
      241 cggcgagtcc gggtttcccc tcccggctct gtgcggcgat catccgcggc agcatgctgg
      301 cggcgatggc ctcggcgccg ccatcgcgcg cctgcgccgc agcggtgtca cgcgccttcc
      361 gcacctccgg cgaatcggcc tccccccggg tgcccaccag caccagcgcc cggatccgtt
      421 cccgtgcctg ccgcaccatc tcgaaggcga tgtagcctcc catcgagtgg ccgcacacca
      481 ccgccttgtc gacgccgagc gccgtcaaca gcgccagcag atcctgggca taggtcgaca
      541 tcgagtagcc gaggtcggga gcgtcggact ggcccatgcc ccgaagatcg ggtgcgatac
      601 gcatccagcc ttcgagcttt gccaccggat actcccagat ggagtgatcg agcggaaagc
      661 catggatgaa gagaatggcc ggaccctgtc cccgcacgtc gacggcgatg ttcacgccat
      721 tcaccgccac ccgcctgaga ttgcccggca acggccgctc cgcgagcacc tgcggcagcg
      781 cctcggggac cggcaccggc gcgctctgac cgttcacgca gacgaagacc agctcggccg
      841 tggcgagcag cgcctcgtcc cgcagccggc gggcggtctg tcgcagggtg aagctggtgc
      901 gcccgagatg gaccaggatc tgggagaagc ggaggacgtc accgggaaac gccggggcgt
      961 ggtattccac cacggacttc ctgactacgg gccacatccc gagacgggtg aagaagtcca
     1021 tccccggtcc ccgagcgatg acttcccacc gagcccgctc gaacagggcg agaaacgagg
     1081 cctggttcag gtggccgtag gcatcgcact catcgggata gacagtcagg tcaatttcgg
     1141 gtgaggccac aacgactccg cgtggaggcg ggcctggcgc aggagggggt gatcaagcgg
     1201 cagggccgcg acgagcctgg cgtcaaaagt atgccagaag cagagacgcg caaaggaagg
     1261 tgcgagcgat tcgagcgcgg cgaaggcctt ggcgccatag gtctcttcga gatggagacc
     1321 cgcggtcgca gcgaggccga cagcgtcccg gctcccggcg gtgctcctgc catagccgcc
     1381 accgagctgg tccttgacga caaggaggcg ggcggcgccg ggagtgacgg acaatcccag
     1441 ctgacgtagc aggcggcggg tgcggcgcac cagacccatc acggtcaggc gattggcgaa
     1501 ccagggatcg gtcacgcgca ctgcgcagac ggcgagatcc agccccgcga tccaggcggc
     1561 gagcagcagc ccggccgcag tccctcccga tcccagcggt accacgatcc ccgccggcgg
     1621 tttcagcacg ccctgttcga tctgccgggc caactcgagg ccggcgttga tgctgccaag
     1681 cacaccccag ggctcggcgc caccggcggc aacccagcgg actgcgccgt gccgggccgc
     1741 cccacgccac gcccgtgcaa tggcgcccag gagggcgacg cgggaactgg ccggatagac
     1801 ggtgccctcc gtgaggctga cggcgaggct cgcggcaacc gactgagtcc agggctgggg
     1861 aaagagagcg aggtgaaccg agagcccgcc ggcgcggccg aaggtggcca gggttgcggc
     1921 ccaggtggat ccgtatccac ccatcgtgac cacactggcc ggcaactgcg ggaggagaaa
     1981 ctcgagggcc cgcagcttgt tgccgccgag agtcccggag ttccggtcat cgcgcttgag
     2041 ggtgagctcc tcgagtccga gggcgcgggc cagctcaggg tgatgctcca ctggggaggg
     2101 aaatgttccc agcggccgac gtggaaccgg tgcggagagc cgttcgagca gtggaaggga
     2161 ggacgggacc gtacgcgcct cgctggatgt agattggagc tcaccatctt ccttcgggaa
     2221 tgtgatggct ccatcgacca tgatatccgg cacgccggac tggagagcgt aagcaagcgt
     2281 gagtgacctg tacctggagc gacaggcgga cttcgacgcc ttcgccgagt cgattgccca
     2341 ggcccccctg ctcgcagtcg acaccgaggc cgcgagtttt catcgatacc gcgaccgggt
     2401 ctacctgatc cagctgtcca cccgcgaccg cacggcggtg gtcgaccccc tcacggtcac
     2461 gaacctgtcg gcgctgggac ggctgctgga gcatcccggg atcgaggtga tctttcacga
     2521 cgccgactac gatctccgga tcctggaccg ggactacgga ttccacgcga gcgagctgtt
     2581 cgacacccga atcgcggccc agcttctcaa tgagccgggg atcggcctcg ccgcgctgct
     2641 cgagaagtac ctcggcgtca ccctggataa gaagtaccag cgggccgact ggtcagtgcg
     2701 cccgctcacg cccgagatgc tggcctacgc ggcgagcgac acgaagtacc tgcccaggct
     2761 gcgcgatatc ctgagggagc gtctggctga gaagggccgc tggagctggg cggaagagga
     2821 gttcgacctg ctcaagcgcg tccgctgggc tccgtccggt ccgccagagg aggcatatct
     2881 ccggctcaag ggggcgcgct cgctcagggg ccacgagctg gccgtcctcc gggagctgtt
     2941 tgcctggcgg gagcaggccg cgagccagct cgaccgggcg cccttccgga tcctccagaa
     3001 cgaggcaatg ctcgccatcg cgaaggcgat gccggctgac ccgacagcgc tgcgggagct
     3061 caaggtcctc tcgccggacc agctgcggcg ccgggggaac gaactcctcg aggcggtggc
     3121 ccgcggggtt ggagcgccgg ccagcagcct gccagtgttc gagcggacca agcggcctgc
     3181 acccgacctg gcgttcgacg cccggctcga acggctcaag caggtccgca atgccgtggc
     3241 cgagcggatc gaactggcgc cgggagtgct gtgtccgaat ggattgctgg aagcgatcgc
     3301 gcggctggtg ccgaggagca cggcgcagtt gagtgagatc ccggaaatgc gccgctggca
     3361 gcgtgaggtg ctgggcccgg agctcctcgc cgcggtcccg cagcaggagc cctagctcag
     3421 ccgccgagaa acgcccggac ccgggggtcc atccgctcgg gcgtccagta cggctcccag
     3481 acgatctcga catccgccga cgtgacgccc tcgagttcct cgacggtgcg cttgacgtcg
     3541 cccacgatct cggcgccggc gggacagccg ggcgaggtca gggtcatgcg gacgtgcact
     3601 gccccgctct cctcgacctc aacctcgtag accaggccga tgtcgatgat gttgaggttc
     3661 aactccgggt ccttcactcc ccggagcgcc ttccgaatcg tttcttccgt ctgcaccatg
     3721 tcaccctcca gacagaaggt tagcgagggg agcgccttta gacgagcttg ccggtcggct
     3781 atcggggggc ggtcatggtc cgcacgacct ggtcggccag atcgttacgg acgctccgga
     3841 gcgcccggat ggagcggccc accttggggt catagctccg attggtgagc agcacgagga
     3901 agatgttctg accgggatcg atccacatga gggtgccagt ccagccggta tgcccgtacg
     3961 ccgtcggact caggagatgg ccataggccg agtcgtcccg gttggctgga tcgggccgct
     4021 cccagccgag gagccggtca cccttgccct gagcggtgga gagaaaggtg tcgatgatag
     4081 cgggcgagaa tacccgctgg ccatcgacga agccacgatt gagccagagc cgtgcgaagc
     4141 gagccaggtc ggcgccggtg ctgaagagtc cggcgtggcc cgcgacgccg cccattcgaa
     4201 ccgcgttctg gtcgttcacc tcacagcaga ccgggtgacc ccggtagcgg ccggtcgggg
     4261 cggtgcgttt ccggagcgag tcgggaggac ggtagaaggt gtgcagcagc ccggcggggc
     4321 ggagcacctc gcgggtgacg aactgctcca gtggctggcc ggtgacttgc tcgaccatga
     4381 ggccaaggag gaggaagttg aggtcgctgt attccggcgc ggcgccgggt ttacgccgga
     4441 gcggctcgcg gtagagcaac gcgatggcgc tgtcacgggt gcgggccagc tgaaagaacg
     4501 ggagatagct gcgaagtccg ctggtgtgat tgagaagcat ccggacggtg acggcatcct
     4561 tgccagcgcc ctgaaagcgc gggagataac ggaccaccgg ggcgttgaga tcgatccggc
     4621 ctgattcgat caggcgcatc accgcgccgg tggtaccgac gatcttggtg agtgaggcga
     4681 gatcccagaa ggtggagtct ggagaggggc tcggaccggc cttccactcg agatgtccga
     4741 acccgcgggc gtggaggatg cggtccctgt tgccgataac gaggaccgcg ccagggtaga
     4801 tcccgcgccg gatcccggat tcgacgatgg agtcggcaag cccaaaggac tgtgcctgag
     4861 cgacggaagc agtagtagca gccataacta ctgcagctat cttggcgacc ttactcaatg
     4921 ctgggtaacg ggttgagccg agccagtgcc aacccacccg gtcggcagct cgtagagcag
     4981 gcgaagggaa aaccggtcgc gctcgctggg ctcgaacacc gtcgcgatcg ggaacatcac
     5041 atcgtcgcgg tcgggcgaat ggggcagccc caaggcgtgc ccgatttcat gcagtgccac
     5101 ggcgcgccgc gcctcaggga gaagcgggcg gccggtgttc ggcgagcgag tgccgagata
     5161 cacctcggcg tgacgaatgc gaccggcgcg gtcccaggtg atgtcagtga agccggcgcg
     5221 gtcgccggag agggtatcgg cccagcggat caccagggcc gcggcggcag tatcggtgac
     5281 ctcggcgaga ttcagcccga tcgcggcagg gctccaggtg tcgagcgccc agcgcgcctc
     5341 gtggaccatc tcggggacga atcccggtgc gccgccgggg acgatggcgt aggtgacagc
     5401 ccgctgagtg gcggtccagc gccgcacgat gctgtccgcc ccggtgacga gggaatcgag
     5461 gtagtggcgc tcgggctcac cagtgagccg caaccggacg gtgagccggg tcagggagtc
     5521 gagcggtgtc acgaggtcgg taggaagctc gatgctggcc cggctctgcc gctcgccccg
     5581 cgaaggagcc agggtgagct cggggagcgc tggtggagac gacgcacccg cggtgacggc
     5641 gccgggacgt agattcccca ggcgcgcgaa caccaccagg gccagcagga tggccaggat
     5701 ggccgcgagc agtcgtcttg ccatgtccaa ggcaatatca gcccccggca gggccgcgcg
     5761 ccatggctgg cggctatgac ggcggtggtc tagactttcg gcctattcac ggcgcccaat
     5821 ccggagacgt cccaccccgt ggcatccatt atttcgcgtg ccctgatccg ctggcggtgg
     5881 gtaatcattc tgttctgggc cgcgatcggg tatttcgccg cggagaaggc gccccaggtt
     5941 gaacaggcgc tcaatgtccg gggcggcacc cgggagccga ccgaagcgag ccgggccgag
     6001 caggttctgc gcgatcgctt cagccggtcg atcaatgact tcttcgtggt ggtcgtccgc
     6061 accaatgccg ggcaggccga ctcgagcccg gtggtcgaca ccctggccca ccggctcgaa
     6121 cagatcccct gggtcagcac cgtcgccact ttcaaatcca ccaacgattc gaccttcctg
     6181 agcaaggacg ggcatcagac gctcatggtc gtggcgatgc gcgccacccg gggcgacagc
     6241 gttgcctcat tcgtggtgcc gctccgggac cagattcgcc aagcggtcaa gctcagccac
     6301 accgacacga ccaccaccac gatccgcctc accggccgct cggcgctcga tctcgacgtg
     6361 cgctcggtag tggcgagcga cagccgccga ggagagatcc ggctgctccc gctcacggcg
     6421 gggattctgc tgctggcgtt cggggcgctg gtggcggcga tcctgccgct gatcgtgggg
     6481 ttcatggcga tctggatcac gctcgcgatc gtggtggt
//
LOCUS       DATIFF010001150         1142 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1375912, whole genome shotgun sequence.
ACCESSION   DATIFF010001150 DATIFF010000000
VERSION     DATIFF010001150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1375912"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1142
                     /locus_tag="VLD58_16800"
     CDS             <1..>1142
                     /locus_tag="VLD58_16800"
                     /inference="COORDINATES: protein motif:HMM:NF021351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GldG family protein"
                     /protein_id="HSB56026.1"
                     /translation="VNYFGWKYYKRFDWTSSQLYSLSDKTKNVLKGLNKDVDFIVFMS
                     PEQQRDLYQPTNELLQRYGSASRRVHVKFLDLEKHPMEAQALSQQYGVTTQGVVVASG
                     KDKRVISSADLADIDSTSGEPRITGYKGEQLFTSAILQLSEGRKPKILFTTGHGERSL
                     DDQGGSGLALAQQVLGRDNFDLSEWASLGKGAVPAGTDLLVIAGPTGSFVQPELDAFS
                     AYLNNGGRMLVLLDPTLAPAGAGGGLVKTNLEGWLARYGIKAGQDIVVDPTATLPFFG
                     PETLFIKSYGEHPITKAFAGAGVPVLTSLVRSMAAGSAPGVKVTDLMRTSPQGWGETD
                     LAHLDRAGKDAADVAGPVAVGVVAESALTPPGKKAMRLAAIGDSDF"
BASE COUNT          195 a          365 c          408 g          174 t
ORIGIN      
        1 cgtcaactat ttcggctgga agtattacaa gcgtttcgac tggacgagca gccagctcta
       61 cagcctctcg gacaagacca aaaacgtgct caaggggctc aataaagacg tcgatttcat
      121 cgtgttcatg tcgcccgagc agcagcgcga tctctatcag ccgaccaacg agctgctcca
      181 gcgctacggg tcggcctcgc ggcgcgtgca cgtgaagttc ctcgacctgg agaagcaccc
      241 catggaggcc caggcgctca gccagcagta cggcgtgacg acccaggggg tggtggtggc
      301 cagcggcaag gacaagcggg tgatctccag cgccgatctc gccgacatcg attcgacgag
      361 cggggagccg cggatcaccg gctacaaggg ggagcagctc ttcaccagcg ccatcctcca
      421 gctttcggag gggcggaagc cgaagatcct gttcaccacc ggccacggcg agcgctcgct
      481 cgacgaccag ggggggagcg ggctcgcgct ggctcagcag gtgctcgggc gcgacaattt
      541 cgatctctcg gagtgggcct cgctgggcaa gggcgcggtg ccggcgggga ccgacctgct
      601 ggtgatcgcc ggccccacgg gcagcttcgt gcagccggag ctcgacgcct tctcggccta
      661 cctcaacaac ggcgggcgga tgctggtgct gctcgatccc accctggcgc cggccggagc
      721 cggcggcggg ctggtcaaga ccaatctcga aggctggctc gcccgctatg ggatcaaggc
      781 ggggcaggac atcgtggtcg atcccacggc gaccctgccc tttttcggcc cggagacgct
      841 cttcatcaag agctatggcg agcatccgat caccaaggcg ttcgcggggg ccggagtgcc
      901 ggtgctgacg agcctcgtcc gctcgatggc ggcggggagc gcgccgggag tcaaggtcac
      961 cgatctcatg cgcacctcgc cgcaggggtg gggggagacc gatctcgccc atctcgaccg
     1021 tgccgggaag gacgcggcgg acgtggccgg tccggtggcg gtcggggtgg tggcggagag
     1081 cgcgctgacg ccgcccggca agaaggcgat gcggctggcg gccatcggcg attcggactt
     1141 cg
//
LOCUS       DATIFF010001151         5260 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_300284, whole genome shotgun sequence.
ACCESSION   DATIFF010001151 DATIFF010000000
VERSION     DATIFF010001151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5260
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300284"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1011
                     /locus_tag="VLD58_16805"
     CDS             <1..1011
                     /locus_tag="VLD58_16805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56027.1"
                     /translation="VLLLAGGSELAAQAVILLVRSTARALAGTPGQATGLLPQASITQ
                     ITQVGFFAVLGMIAVARTATRAKAEVTVTVLAVALLLVLSAGVLRADLTIDGIGQLLR
                     PQFGRLGWSGAAEAIRLALLTLGLTLGMGLAHGAALPGSRSILRTSMALLLLVVGVTV
                     LVLLLIATALHPYQMPPLDGRALLLGQIPAVLGGEPEAAVSAAWYALVALAGAAGGLA
                     VLHSVVEQLVGRYGLRRRWGVVCAVGSAWVLSLLARFTGAPWAGPALLRSVATDVLVP
                     GATLGLAIFAGWAMSRRATRSELGMRRPAEFRLWRVLVRYVTPAVLALVLVAGVARLI
                     AG"
     gene            complement(1012..1689)
                     /locus_tag="VLD58_16810"
     CDS             complement(1012..1689)
                     /locus_tag="VLD58_16810"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSB56028.1"
                     /translation="MRSTTMLYTRHAVLSTMLGLTLTNCATKSQTGAVVGGAGGAVIG
                     GVIGHSTGNTAAGAIIGAAAGGIVGGIIGAEMDKQAKELKQNIPGARVERVGEGIAVT
                     FESGLLFDFDSDVIRPEAAKNLRALAKSLDKYPGSDLLIVGHTDQVGAASYNQKLSQN
                     RADAAMRYLVAQGVRQGRVATKGMGETEPIAPNETEAGRQQNRRVEVAIYASDAHKKE
                     VAKQNPS"
     gene            complement(1782..4547)
                     /locus_tag="VLD58_16815"
     CDS             complement(1782..4547)
                     /locus_tag="VLD58_16815"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HSB56029.1"
                     /translation="MSTDGRWTRLMDLFDQARDIAPAEREAWLARVCEGDGELRQELV
                     RMLDADSSGGGILDLEVVVPFPDELPALASELAERYELSRELGEGGMARVFLATERKH
                     GRTVVLKVLKPEIARHFGRERFYREARILAQLAHPHIVGLIDSGEAGGHLYYSMPYLE
                     GETLRERLKRHGPLPIPTAVSVLRDIADALRHAHRAGVVHRDLKPSNIFLVGDHAFLL
                     DFGIAKLLEPEPGDDPPTETGAAIGTPAYMAPEQRIGDPYLDHRADLYTWGVVAYECV
                     LGRLPDTHLLPISAGDIVDRRPDTPPALARLIAECLSPAAEDRPDDADRVARALEGRL
                     SAAVGVIPDEPASPRWRIAAILTGVVLLAGAGAALTFRTHAPDEGLLQAPVAVSAFTN
                     ETGDPSLDTWGRLAGDWITEGLHGLGSLGVVPWTTSLKASELIDEQRNASKPVDPVAV
                     LRDETGAATVITGSYYRVGDSLRFHAEVADARAGRVVATLPPVTVPVSAPETGISELR
                     QRVMGMVAVSQNTGVSRVAGLTRRPPTFEAYQAFDRGLTLSRGQEYEEALPEFLHAYR
                     LDTTFISALLSAATASWNAGQPAVMDSLLKEIRKREMTLTDFQRLRLEGMEARIAGDG
                     QAELAALRRAAAEAPNSQAVYNLADVALNTDRPAEALAALETLDPDRGEMRGWTPYWY
                     DLTHAYHLMDRHDAELKAARELRRRYPDRRAGLVFEVRALAAVGDTAAVDRLVAEAQA
                     LPPNTYWSQGAALTVAGEELQAHGFGTTGWRYLTQAVSWLDRQLALTPGDRSHRYWLA
                     SALYDLGDWRRSYGVARDLAKQFPNRTDYRILATVGAARLNLPGADSILGQVRPHERG
                     AATLLRARLATIRGQPDAALGLYSEATQLGLNGLPWIHASAAYDLFLLGEARRRLPFS
                     LRAGLQP"
     gene            complement(4544..5122)
                     /locus_tag="VLD58_16820"
     CDS             complement(4544..5122)
                     /locus_tag="VLD58_16820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSB56030.1"
                     /translation="MPSPALPPNHEVTQLLQQLRAGNPDARERLFPLVYEELRQVARR
                     ALRRERIDHTLRPTELVHEAFLKLGSADGPWQDRAHFLGVAARAMRQILVDHARRRLA
                     GKRGGGMVATTLEDVGAETGLPPEEVLALDSALDRLEQQDPRLRALVEYRFFGGLTDK
                     EIAELLQISERTVNRDWVRARAWLHKEVYPAS"
BASE COUNT          719 a         1796 c         1858 g          887 t
ORIGIN      
        1 gtgctcctcc tggctggggg tagtgagctc gccgcccagg ccgtgatcct cctcgtccga
       61 agcaccgcaa gagcccttgc cggcactcca gggcaggcca ccggtctcct gccacaggcc
      121 tccattaccc agatcacaca ggtaggattc tttgcggtgc tcgggatgat tgctgtcgcg
      181 cggacagcca cccgggccaa ggcggaggtc accgtcacag tgctggccgt ggccctgctg
      241 ttggtcctga gcgccggggt gcttcgtgcc gacctcacga tcgacggcat cggccaacta
      301 ctgcgacccc agtttgggcg actgggatgg agtggcgcgg cggaggcaat caggctggcg
      361 ctcctcaccc tcgggcttac cctgggaatg ggcctggccc atggcgctgc gctacccgga
      421 tcccgctcga ttctgcggac ctcgatggcc ctcctcctcc tggtagtagg cgtgacggtc
      481 ctggtgctgc tcctcatcgc caccgcgctc catccctacc agatgcctcc actcgacggg
      541 cgagccctcc tcctcggtca gatacccgcg gtgctcgggg gagagccgga ggccgcggtc
      601 tcggcggcgt ggtacgcact ggtggcgctg gctggtgcgg cgggcgggtt ggcggtgctg
      661 cactcggtgg tggagcagct ggtcggccgg tatggactcc ggcgtcggtg gggcgtggtc
      721 tgcgcggtcg ggagcgcctg ggtcctttct ctgctggcgc ggttcacggg tgcgccctgg
      781 gcgggaccgg ccctgctccg ctcggttgcc accgacgttc tcgtgcccgg cgccacgctg
      841 ggtctggcga tctttgccgg gtgggccatg tcgcgccggg ccacccgcag cgagctcggc
      901 atgcgccggc ccgccgagtt tcgcctctgg agggtcctgg tccgctacgt caccccggcc
      961 gtgctggcgc tggtgctggt ggccggggtg gcgcggctca tcgccggctg atcagctcgg
     1021 gttctgcttc gcgacctcct tcttgtgggc gtcgctggcg tagatcgcga cttccacccg
     1081 ccggttctgc tgccggcccg cctcggtctc gttgggcgcg atcggctcgg tttcacccat
     1141 cccctttgtg gcgacccggc cctgccggac tccctgcgcc accaggtagc gcatggcggc
     1201 gtcggcgcgg ttctgtgaga gcttctggtt gtagctggca gcgcccacct gatcggtgtg
     1261 gcccacgatc agcaggtcgg agccggggta cttgtcgagg ctctttgcca gggcccgcag
     1321 gttcttggcg gcctcggggc ggatcacatc ggaatcgaag tcgaagagca gccccgattc
     1381 gaacgtcacc gcgatccctt ctcccacccg ctcgacccgc gcacccggga tgttctgctt
     1441 gagttccttg gcctgcttgt ccatctccgc gccgatgatc ccgccgacga tgccgccggc
     1501 cgcggcgccg atgatagcgc ccgcggcggt attgccagtg gagtgaccga tgacgccacc
     1561 gatcaccgcc ccccctgcgc cgccgacaac ggcaccggtc tgggacttgg tggcgcagtt
     1621 ggtgagtgtg agaccgagca tggtgctcag aacggcgtgg cgggtgtaca gcatggtggt
     1681 tgaacgcacg gtgtcctcgt cagtgttcgg gttccctgtc gatagcgccg ggacggtagc
     1741 aggccctggc agtgtgccgc tgtgacctga gccccctcac ctcagggttg gagaccggcg
     1801 cggagcgaga agggtagacg gcggcgcgcc tctcccagaa ggaagaggtc gtaggcggcc
     1861 gaggcgtgaa tccacggcaa tccattgagg ccgagttgcg tggcctcgct gtagagaccg
     1921 agcgcggcgt cgggctggcc ccggatggtc gcgaggcgtg cccggagcag ggtcgcggcg
     1981 ccgcgttcat ggggacgcac ctggccgaga atgctgtccg ctcccggcag gttgaggcgg
     2041 gccgcaccca cggtggcgag aatccggtag tccgtccggt tgggaaactg cttggcgaga
     2101 tcgcgcgcga cgccgtaaga ccggcgccag tcgcccaggt cgtagagtgc gctcgccagc
     2161 cagtagcggt gcgagcggtc gcccggcgta agcgcgagct gtcggtcgag ccagctcacc
     2221 gcctgggtca ggtagcgcca tccggtggtg ccgaagccgt gggcctggag ctcttcgccc
     2281 gccacggtga gcgccgcgcc ctgcgaccaa taggtattgg gtggcagtgc ctgcgcctct
     2341 gccaccaggc ggtctactgc cgccgtgtca ccgacggctg ccagggcccg cacctcgaac
     2401 accagcccgg cccggcggtc gggatagcgc cgccggagtt cccgcgcagc cttgagctcc
     2461 gcgtcgtgcc gatccatcag gtgataggcg tgggtgaggt cgtaccagta gggagtccac
     2521 ccgcgcatct cgccccggtc gggatcgagc gtctccagcg cggcgagtgc ctcggcgggg
     2581 cggtcggtgt tcagcgccac gtcggccagg ttgtagaccg cttgtgagtt gggggcctcg
     2641 gcggccgccc gccggagggc ggcgagttcg gcctgcccgt cacccgcgat ccgcgcttcc
     2701 atgccctcga gcctgagccg ctggaagtca gtgagggtca tctcccgctt ccggatctcc
     2761 ttgaggagcg agtccatcac cgccggctgt cccgcattcc agctcgccgt ggcggccgag
     2821 agaagcgcgg agatgaaggt cgtgtcgagc ctgtaggcgt gcaggaattc cgggagcgcc
     2881 tcctcgtact cctggccccg gctcagggtc aggccccggt cgaatgcctg atacgcctcg
     2941 aacgtcgggg gacggcgggt gagaccggcc acacgggaga ctccggtgtt ctgactcacg
     3001 gcgaccatgc ccatcacccg ttggcgcagc tcggagatgc cggtctctgg ggcactcacc
     3061 ggcaccgtca ctggcggcaa cgtcgcgacc acccgtcccg ccctcgcatc ggcgacttcg
     3121 gcatggaatc ggagcgagtc gcccacccgg tagtacgagc cggtgattac ggtcgcggcg
     3181 ccggtctcat cgcggagcac cgccaccggg tccaccggct tcgaggcgtt gcgttgctcg
     3241 tcgatcagct cggacgcctt gagcgaagtg gtccagggga ccacaccgag cgatcccagg
     3301 ccgtggaggc cctcggtgat ccagtcgccg gcgagccgtc cccaggtgtc gagcgacggg
     3361 tcgccagtct cgttggtgaa tgcgcttacg gcgaccgggg cctgcagcag gccttcgtcg
     3421 ggcgcatggg ttcgaaaggt gagggccgcg ccagccccgg ccagcaggac gacgcccgtc
     3481 aggatggcgg cgatccgcca gcggggcgac gccggctcgt cgggaatcac gcccacagcg
     3541 gcgctcaatc tcccctcgag cgcccgggct acccggtccg cgtcgtcggg acggtcctcc
     3601 gccgcgggcg agaggcactc cgcgatcaac cgagccaggg cgggcggcgt gtcgggccgt
     3661 cggtccacga tgtcgccggc cgagatcggg agcaggtggg tgtccgggag gcgcccgagc
     3721 acgcattcgt acgccaccac gccccacgta tacaggtccg cccggtgatc gagatagggg
     3781 tcgccgatcc gctgctccgg cgccatgtac gccggcgtcc cgatggccgc accggtctcg
     3841 gtgggaggat cgtcgcccgg ctccggctcc agcagcttgg caatgccgaa gtcgagcagg
     3901 aacgcgtggt ctcccaccag gaagatgttg ctcggcttga gatcgcggtg caccaccccg
     3961 gcgcgatgcg catgccgcag cgcatccgcg atatcgcgga gcacgctcac ggccgtaggg
     4021 atgggtagcg ggccgtggcg cttgagccgt tcccgcaggg tttccccttc gaggtacggc
     4081 atgctgtagt agagatgacc tccggcttcc ccggagtcga tcaggccgac gatatggggg
     4141 tgggccagct gggccagtat ccgggcttcg cgatagaacc gctcccggcc gaagtggcgc
     4201 gcgatctccg gcttgagcac cttgagcacg acggtgcggc cgtgcttccg ctcggtggcg
     4261 aggaagaccc gcgccatacc cccttcgccc agctcacgcg agagctcgta gcgttccgcc
     4321 agttcgctgg cgagggccgg gagttcgtca gggaagggta cgacgacttc aaggtcgaga
     4381 atgccgccgc cgctgctgtc cgcgtcgagc atgcggacca gttcctgccg gagttcacca
     4441 tcaccttcgc agacgcgggc cagccatgct tcccgctccg ctggcgcaat gtcccgggcc
     4501 tggtcgaaca gatccatcaa ccgggtccac cggccatccg tgctcatgag gcgggataca
     4561 cttccttgtg cagccaggcg cgggcccgaa cccagtcacg attcaccgtg cgttcgctga
     4621 tctggaggag ctcggcgatc tccttgtcgg tgagcccgcc gaagaaccga tactccacca
     4681 gggcccggag ccgaggatcc tgctgctcca gccggtcgag cgccgaatcc agtgccagta
     4741 cttcttcggg cgggagcccc gtttccgcac ccacatcctc gagggtggtg gccaccatgc
     4801 cgccgccccg cttgccggcc agccggcggc gggcatgatc gaccaggatc tgccgcatcg
     4861 cccgggcggc cacccccagg aagtgggccc ggtcctgcca gggcccgtcg gcgctgccga
     4921 gcttgagaaa ggcttcgtgg accagctccg tcgggcggag cgtatggtcg atccgttccc
     4981 gccggagcgc gcgccgggcc acctgccgca actcttcgta gaccagggga aacagccgct
     5041 cccgcgcgtc gggattcccg gcccggagct gctgcagcag ctgggtgact tcgtggttgg
     5101 gcggcagggc tggtgatggc atacagggaa ggtggcggga cgcgcccctg gacggaagat
     5161 cggttgccct tctgttatgt gcccgaccgc gcctcggcca tgatgtccgc gatgaggccc
     5221 aggaatgtcg ctccccggaa tggcttgtcg aggaaacgcg
//
LOCUS       DATIFF010001152         3429 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2145492, whole genome shotgun sequence.
ACCESSION   DATIFF010001152 DATIFF010000000
VERSION     DATIFF010001152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3429
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2145492"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            423..2264
                     /locus_tag="VLD58_16825"
     CDS             423..2264
                     /locus_tag="VLD58_16825"
                     /inference="COORDINATES: protein motif:HMM:NF012926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HSB56031.1"
                     /translation="MRYQPIENHGIVGNMHSTALVSLDGSVDWLCLPRFDSPSVFGAI
                     LDAEKGGRFRIAPAAAGQQRQKQYYWPETNVLITRFLHPDGIAEVEDYMPVGSGAGSE
                     AQLVRRVRVVRGQLPLEMECRPAFDYARARHASTVSAHGARFDGPGLSLGLAASVPLR
                     PDDGGAVAAFPLGEGQSATFVLRTIAPDARPGRCPGTEEAGDWFRETVAYWQRWAAHC
                     TYRGRWREVVLRSALALKLLTYQPTGAIVAAPTTSLPEGIGGVRNWDYRYTWIRDAAF
                     TVYAFLRVGFTEEAARFMDWLTARWKERESHCAGPLQLMYAVDGRSDLAEQELTHLDG
                     YAGSRPVRIGNAAHGQLQLDIYGELMDAAYLHNKYAAPVGYDSWRHLRDLVDWVAGNW
                     GREDEGVWEVRGGRRHFVYSKFMCWVALDRGLRLADKRSFPADRAAWLKARDAVYEEV
                     MARGWSASRGSFVQSYGSDALDASALLMPLSFFMAPNDPRMLATVDAIRSPATRGGLA
                     ADGLVYRYDPKAAPDGLPGVEGTFNMCSFWLVEALTRAGRTDPRRLAEARLLFEQMLG
                     YGNHVGLYAEQTGPSGEALGNFPQAFTHLALISAAFNLDRALAGRAD"
     gene            complement(2492..>3429)
                     /locus_tag="VLD58_16830"
     CDS             complement(2492..>3429)
                     /locus_tag="VLD58_16830"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSB56032.1"
                     /translation="DVLVIQEIPEPEPKDGHAVIQVKAFGLNHAEMHMRKGEWAEIAD
                     VSGIECVGVVKSCPGGEFAPGTKVAALMGGLGRTINGSYAEYTRAPVTNVAVIESGLS
                     WADLAAIPETYATAWTCLFRNLEIAPGQTLVIRGATSSFGQAALNMAVNAGAKVVATT
                     RSRDRFPMLEALGAARAEVEGPDLSKRIAEAGKIDAVLDLVGNSTILDSLAMLRRGGR
                     ACLAGWLGGLAPIADFNPLAQMASGVYLTFFASFVFGKPGFPLSDVPLQAIAADVEAG
                     RYRAKPSRVFRFEEIQEAHRVMESNEAKGKMVVVL"
BASE COUNT          516 a         1190 c         1212 g          511 t
ORIGIN      
        1 acactggcgg aggatcatcc gacgccacca gacgagcggt ctgtccgttc acgccttctg
       61 tgagagggag gggctcaagc gggcaactgg tctactcgac gatacccgac ggacgatgct
      121 gggtggtggt ggccgggtcc gcggatatcc ggtcctcaag agatgacagg cggaatccta
      181 tcgtcggggt ctcggatcat ggcccgtttg aacctcgtcg atccgtcaca ggccgaggga
      241 gagctgaagg atttgctgtc ggccgtgaag tccaagatgg ggcggatcgt caacctggtc
      301 aaggtgatgt cgaactcccc cgccgtgctc gaggcttacc tcggccccaa gctggctgag
      361 cagctcgccc tggcggtgag cgaggcggac ggttgcagca attgcgacga gggtccaggc
      421 caatgcgcta ccaaccgatc gagaaccacg gcatcgtcgg gaacatgcac agcaccgccc
      481 tggtcagcct ggacgggtcc gtcgattggc tctgcctgcc gcggttcgac tcgcccagcg
      541 tgttcggggc gatcctcgac gccgaaaagg gggggcggtt ccggatcgcc ccggccgcgg
      601 ccggccagca gcgccagaag caatattact ggccggagac caacgtcctg atcacccggt
      661 tcctgcaccc cgacggcatc gccgaggtcg aggactacat gccggtcgga tccggcgccg
      721 ggtccgaggc ccagcttgtc cgccgggtgc gggtggtccg cggccagctg ccgctggaga
      781 tggagtgtcg cccggcgttc gactacgccc gggcgcgcca cgccagcacg gtgagcgcgc
      841 acggcgcccg cttcgacggc ccgggcctgt ccctggggct ggccgcctcg gtcccccttc
      901 ggcccgacga cggcggcgcg gtggccgcgt tccccctcgg cgaggggcag agcgcgacct
      961 tcgtcctgcg gaccatcgcg ccggacgccc ggcccggccg gtgccccggg accgaggagg
     1021 ccggggactg gttccgcgag acggtcgcct actggcagcg gtgggcggcc cactgcacct
     1081 accgcggccg gtggcgcgag gtggtcctgc gctcggcact ggcgctgaag ctgctcacct
     1141 accagccaac cggagcgatc gtcgccgccc cgaccaccag cttgccggag gggatcggcg
     1201 gcgtgcggaa ctgggactac cgctacacct ggattcgcga cgccgcgttc acggtctacg
     1261 ccttcctgcg ggtcgggttc accgaggagg cggcccggtt catggactgg ctgaccgccc
     1321 gctggaagga gcgcgagtcg cactgcgccg ggccgttgca gctcatgtac gccgtggacg
     1381 gccggtccga cctggccgag caggagctga cgcacctcga cggttacgcg gggtcgaggc
     1441 cggtccggat cggcaacgcc gcccacgggc agctccagct ggacatctac ggcgagctga
     1501 tggacgcggc ctacctgcac aacaagtacg ccgccccagt cggctacgac tcctggaggc
     1561 acctccgcga cctggtggac tgggtggccg gcaactgggg ccgggaggac gagggcgtct
     1621 gggaggtgcg cggcgggcgg cggcacttcg tctactcgaa gttcatgtgc tgggtggcgc
     1681 tggaccgcgg gctgcggctg gcggacaagc gctccttccc ggccgaccgg gccgcctggc
     1741 tgaaggcccg cgacgcggtc tacgaggagg tgatggcgcg ggggtggagc gcgtcgcggg
     1801 ggtcgttcgt gcagtcctac ggctccgacg ccctggacgc cagcgcgctg ctcatgccgc
     1861 tgagcttctt catggcaccc aacgacccgc gcatgctggc cacggtggac gcgatccggt
     1921 cgccggccac caggggcggg ttggccgccg acgggctggt ctaccgctac gacccgaagg
     1981 ccgccccgga cgggctgccg ggcgtggaag ggacgttcaa catgtgcagc ttctggctgg
     2041 tcgaggccct gacccgggcc gggcggaccg atccgcgccg gctggccgag gcccggttgc
     2101 tgttcgagca gatgctgggc tacggcaacc acgtcgggct gtacgccgag cagaccgggc
     2161 cgagcggcga ggccctgggc aacttcccgc aggccttcac ccacctggcg ctaatcagcg
     2221 ccgccttcaa cctcgaccgg gccctcgccg gcagggccga ttgacgcagc cgcacgcgaa
     2281 ggacagttac agactgcgat cgcgctgatg ccgggccgcg acgggctgct cgaacgcgga
     2341 attggcgagc accgagcgct ttacccagta cacttctgat ctgtgccacg aacggctaaa
     2401 atcccgggcc gtctcgcggg cctgatccgg aggcaggcgc gctcgacgac tcgcgacagc
     2461 gcggtccggt agtgaccatc caaacgatcg ctcacaggac gacgaccatc ttccccttgg
     2521 cctcattgga ttccatgacg cggtgcgcct cctggatctc ctcgaatcgg aacacgcgcg
     2581 acggcttcgc ccggtaacgg cccgcctcca cgtcggccgc gatcgcctgc aagggcacgt
     2641 ccgagagggg aaagcccggc ttcccgaaca cgaagctggc gaagaaggtc aggtagacgc
     2701 cgctggccat ctgcgccagc gggttgaagt cggcgatcgg cgccagcccg cccagccacc
     2761 cggccaggca ggcgcggcca ccccggcgca gcatcgcgag ggaatcgagg atggtgctgt
     2821 tgccgaccag gtcgagcacg gcatcgatct tcccggcctc ggcgatccgt ttggaaaggt
     2881 ccggcccctc gacctccgcc cgggcggcgc cgagcgcctc cagcatcggg aaccggtcac
     2941 ggctgcgggt ggtggcgacg accttcgccc cggcgttgac cgccatgttg agcgccgcct
     3001 ggccgaaaga cgaggtcgcg ccacggatga ccagcgtctg gcccggggcg atctccaggt
     3061 tgcggaacag gcacgtccag gccgtggcgt aggtctccgg gatcgcggcc aggtcggccc
     3121 acgacaggcc cgactcgatg accgccacgt tcgtcaccgg ggcgcgggtg tactcagcgt
     3181 agctgccgtt gatcgtccgg cccagcccgc ccatcagggc cgccaccttg gtcccggggg
     3241 cgaactcgcc gccggggcag gacttgacga cgccgacgca ctcgatgccg ctgacgtcgg
     3301 cgatctcggc ccactccccc tttcgcatgt gcatctctgc gtggttgagg ccaaacgcct
     3361 tgacctggat caccgcgtga ccgtctttcg gttcgggctc cgggatctcc tggattacca
     3421 gcacgtccg
//
LOCUS       DATIFF010001153         4537 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_761066, whole genome shotgun sequence.
ACCESSION   DATIFF010001153 DATIFF010000000
VERSION     DATIFF010001153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4537
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_761066"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..672)
                     /locus_tag="VLD58_16835"
     CDS             complement(<1..672)
                     /locus_tag="VLD58_16835"
                     /inference="COORDINATES: protein motif:HMM:NF026199.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidC/Oxa1 family insertase periplasmic-domain
                     containing protein"
                     /protein_id="HSB56033.1"
                     /translation="MDRRTVWAILLMMVIAIAPALLIKRPAQRGTAAPASGRPDSALA
                     HDTARPRATGPTAAAATDTGLAAPGAAPAVAAATSDTVRVTSPLYTYGVSTLGGRLVE
                     AELRRYASMAPGERGREAQILPPGSDLLGMTLVTGRDTVSFDSVAFTPSADSLAVAGP
                     TLLRLSATRGNVGVELTYTFRPDDYRVDVSGRVSGVGPNGGQMQVGLGPTLANTEANL
                     EENHRD"
     gene            complement(691..921)
                     /gene="yidD"
                     /locus_tag="VLD58_16840"
     CDS             complement(691..921)
                     /gene="yidD"
                     /locus_tag="VLD58_16840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013936843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HSB56034.1"
                     /translation="MGPVLALPRRLLAALIRGYQIVLSPLLPPSCRFHPSCSHYALEA
                     VTRHGALKGSWLAARRLARCHPFHPGGYDPVP"
     gene            complement(925..1305)
                     /gene="rnpA"
                     /locus_tag="VLD58_16845"
     CDS             complement(925..1305)
                     /gene="rnpA"
                     /locus_tag="VLD58_16845"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: protein motif:HMM:NF013022.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HSB56035.1"
                     /translation="MAPVEARRLLTAAARLPRAHRLARASDIRRCLATGRRRRFEHLD
                     MIWTDNLVGHPRMGLIVPKYQSSAVARNRLRRRLREIWRLEIQPHQPASDLVIRARRE
                     AYGAAFARLRGELLAWRRAALGIG"
     gene            complement(1275..1436)
                     /gene="rpmH"
                     /locus_tag="VLD58_16850"
     CDS             complement(1275..1436)
                     /gene="rpmH"
                     /locus_tag="VLD58_16850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HSB56036.1"
                     /translation="MKPSYRPRNKRRINTHGFRARMATRWGRAVLSRRRKKGRKRLTV
                     SLPSKHGGS"
     gene            1739..3145
                     /gene="dnaA"
                     /locus_tag="VLD58_16855"
     CDS             1739..3145
                     /gene="dnaA"
                     /locus_tag="VLD58_16855"
                     /inference="COORDINATES: protein motif:HMM:TIGR00362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HSB56037.1"
                     /translation="MQLSAKDAWKRILDEAHRELPDHTIRTWLEPTEAIALDEGRLIV
                     GAPDQFAVEWNETKHAALLSKLAEPVVGQPTSIVFRVHEDRQKRPQMDFFVSPPAAAA
                     ARGDAEAAGRQAVNPSSQPLNERYTFDTFVIGKSNELAAAAGHAAAESPGKTYNPLFI
                     YGATGLGKTHLMQAIAQGVVQRQPDTRVLYVGAEQFINEVIESIHSRTMPEFRRRYRT
                     DVDLFLVDDVHFLEGKEMTQEEFFHTFNALYEGNKQIVLTSDRPPKEIPGLEARLVSR
                     FEWGMVADIGQPDLEHRIAILRKKQEQDHLEMTIPDDVLRFIAEHVRSNVRELEGCII
                     KLLLFASLKHKEVSIELAREALSDRIRPGEDSQASPRARPSINKVQEVVARRWGVTPE
                     GLRSKARIKTLTVPRQIAMYLARELLEMQLVEIGQAFGGRDHSTVIHSVDKVSRQMSR
                     DRTFRERVEHARQELSAE"
     gene            3365..4480
                     /gene="dnaN"
                     /locus_tag="VLD58_16860"
     CDS             3365..4480
                     /gene="dnaN"
                     /locus_tag="VLD58_16860"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HSB56038.1"
                     /translation="MKLTITREQLQEGLVAVAASVPAKTTLPILSNILLEATKDGIRL
                     SGTDLDIAVSTTVSASVDQEGAITLPARKLVEIVRELPSAAIRLTASGEQRVTIECGR
                     SKFRLLGLPREEFPAFPGVKFEAGWRAPASDLQKLIAHVAFAASTEESRPILNGVLWE
                     LRPERMRMVATNGHRLARMDVPTPPSAAAAQADLIVPPKALEQIRRLFGSDDDVEIAR
                     SENHLGFRSASTQVFTRLIEGPYPNYEQVIPRENDKAATADKAAFTAALRRMSIVASD
                     QTHRIRMAFANGSCKLSVQTPDLGEAQEEITVSYEGDPLEIGFNAAYLLEILKYIPTD
                     EVRMTFKAPERAATCEPVGWDDPASYLALVMPLRLVD"
BASE COUNT          749 a         1520 c         1609 g          659 t
ORIGIN      
        1 gtcccggtga ttctcctcca ggttggcctc ggtgttggcc agcgtcgggc ccagccccac
       61 ctgcatctgg ccgccgttgg gccccacgcc gctgacccgg ccggacacgt cgacgcggta
      121 gtcgtcgggg cgaaaggtgt aggtgagctc gaccccgacg ttgccccggg tggccgacag
      181 ccggagcagg gtcggaccgg cgacggcgag gctgtcggcc gacggggtga aggcgacact
      241 gtcgaaggag acggtgtcgc ggccggtcac cagggtcatc ccgagcaggt cgctccccgg
      301 agggaggatc tgggcctcgc ggcctcgctc gcccggcgcc atcgaggcgt agcggcgcag
      361 ctcggcctcc accagccgcc cgcccagcgt ggagacgccg taggtgtaga gcggggaggt
      421 cacccggacg gtgtcgctgg tcgccgcggc cacggccggg gccgcgcccg gcgcggcgag
      481 cccggtgtcg gtggcggcag ccgcggtggg gcccgtggcc cgggggcgcg ccgtgtcatg
      541 cgccagggcg ctgtctggcc ggccgctggc cggcgccgcg gttccacgct gggccgggcg
      601 cttgatcaac agcgccgggg cgatggcgat caccatcatc aggaggatcg cccaaaccgt
      661 acgacggtcc atggactcta ggtcacgagg tcagggaacg ggatcatagc cgcccggatg
      721 gaacggatgg cagcgagcca gccggcgcgc ggccagccag cttcccttga gggcgccgtg
      781 gcgggtgacc gcctcgagcg catagtgcga gcaggacggg tggaaccggc agctgggcgg
      841 cagcagcgga gacagcacga tctggtagcc gcggatcagt gcggcgagca gccggcgggg
      901 cagtgcgagc acggggccca tcgctcaccc gatcccgagc gccgctcggc gccaggcgag
      961 gagctcgccg cggaggcggg cgaaggccgc gccgtaggcc tcgcgccggg cccggattac
     1021 gaggtcggag gccggctggt gaggctggat ctcgagccgc cagatttccc ggaggcgccg
     1081 gcgcaaacga ttgcgggcca ccgcggagga ctggtacttg gggacgatca gccccatccg
     1141 cgggtggccc accaggttgt cggtccagat catgtccagg tgctcgaaac ggcggcgccg
     1201 gcccgtcgcg aggcagcggc gaatgtcgga cgcgcgcgcg agccgatggg cccgcggcag
     1261 gcgcgccgcc gccgtcagga gcctccgtgc ttcgacggga gcgatacggt gagccgcttc
     1321 cgccccttct tccgccggcg cgagaggacc gcgcgacccc accgcgtggc catgcgcgcc
     1381 cggaatccat gggtgttgat ccggcgcttg ttgcgcgggc gatacgacgg cttcatcgcg
     1441 ggaacccctc caaagtgagc cggggaagct agttaaagcg gaggccgagg tcaagttgtg
     1501 cggttcgggc gcgggcacgc gcggtggacg ctgcgagggc ggcgattcgg actgtgttcg
     1561 cgtcagctcg atgcgccgcg cgtgggcttc gcggtgcacc tttcgtccgc gtgcacgagc
     1621 accgctccgc cgttgcgcaa gggcacgctc gcggcgattc ttgcctcatt gacttttcca
     1681 cacccgctcc gtaacatctc tcgcccttga aaaatccccc accgcatttc gagcctcgat
     1741 gcagctgtcc gcgaaagacg catggaagcg aatcctcgat gaggcgcatc gcgaacttcc
     1801 cgatcacacg atcaggacct ggctcgagcc caccgaagcc atcgccctcg acgaaggccg
     1861 cctgatcgtc ggagcgccgg accagttcgc ggtggagtgg aacgagacca agcacgcggc
     1921 gctgctttcc aagctcgccg agccggtggt cggccagccg acttcgatcg tcttccgggt
     1981 ccacgaggac cgccagaagc gtccccagat ggacttcttc gtctccccgc cggcggccgc
     2041 ggcggcccgg ggcgacgcgg aggcggccgg ccgtcaggcg gtgaatccca gcagccagcc
     2101 gctcaacgag cgctacacct tcgatacctt cgtcatcggc aagtcgaacg agctggcggc
     2161 ggcggcgggg cacgcggcgg ccgagtcgcc gggcaagacc tacaacccgc ttttcatcta
     2221 tggcgccacc gggttgggaa aaacccacct gatgcaggcg attgctcagg gggtggtcca
     2281 gcggcagccg gacacccggg tgctctacgt cggcgccgag cagttcatca acgaggtcat
     2341 cgaaagcatc cacagccgga cgatgccgga gttccgccgg cgctaccgga ccgacgtgga
     2401 cctcttcctg gtggacgacg tccatttcct cgagggcaag gaaatgacgc aggaggagtt
     2461 cttccatacg tttaacgcgt tgtacgaggg caacaagcag atcgtcctga cctccgaccg
     2521 gccccccaag gaaatccccg ggctcgaggc caggctggtc agccggttcg aatggggtat
     2581 ggtggcggac atcggccagc ccgacctgga gcaccggatc gcgattctcc ggaagaagca
     2641 ggagcaggac cacctggaga tgacgatccc ggacgacgtg ctccggttca tcgccgagca
     2701 cgtccggtcc aacgtgcggg agctcgaggg gtgcatcatc aagctgttgc tgttcgcctc
     2761 gctcaagcac aaggaagtct cgatcgagct ggcccgggaa gcgctctccg accggatccg
     2821 gccgggtgag gactcgcagg cctcgccccg ggcccggccg tcgatcaaca aggtccagga
     2881 agtcgtggcc cggcgctggg gcgtgacacc ggaagggctc cggtccaagg cgcggatcaa
     2941 gaccctgacg gtgccgcgcc agatcgcgat gtacctcgcg cgcgagctgc tggaaatgca
     3001 gctggtggag atcggccagg cgttcggcgg gcgggaccac tcgacggtga tccacagcgt
     3061 cgacaaggtg agccgccaga tgtcgcgcga tcggaccttc cgggagcggg tggagcacgc
     3121 gcgccaggag ttgtccgcag aataatcccc gcgcggtcca cgccgtgtgg gcggtcttga
     3181 cggcggtgtg gaacccgggc ccgtgtcccc gcgccccaca gggtgtcgac acggtcacga
     3241 cgaggtaact gtgatgcgag gggtgggtta cggcgccggc ccacatttcc agaccctcta
     3301 ctactgctgc tagttctttt aaactggaag agtagtagtt gttttagcct tctcgaggag
     3361 cggcatgaag ctgacgatca cgcgggagca gctgcaggaa ggactcgtag ccgtggcggc
     3421 gagcgtgccc gccaagacga cgctaccgat cctgtccaac attctccttg aggcgacgaa
     3481 agacgggatc cgcctctccg gcaccgatct cgacatcgcg gtcagcacca cggtgtcggc
     3541 gtcggtagac caggaaggcg cgatcacgct tccagcccgg aagctggtcg agatcgtgcg
     3601 cgagctgccc agcgccgcca tccggcttac cgcgtcgggc gagcagcggg tcaccatcga
     3661 gtgcgggcgc tccaagttcc ggctgctggg tctgccccgc gaggagtttc ccgcgttccc
     3721 cggggtcaag ttcgaggccg gctggcgcgc gccggccagc gatctgcaga agctgatcgc
     3781 ccacgtggct ttcgccgcca gcaccgagga gagccggccg atcctcaacg gtgtcctctg
     3841 ggagctccgg ccggagcgga tgcggatggt ggctaccaac ggccatcgcc tggcgcggat
     3901 ggacgtgccc acgccgccct ccgccgcggc ggcccaggcc gatctgatcg tcccgcccaa
     3961 ggcgctggag cagatccgcc ggctgttcgg ctccgacgac gacgtggaga tcgcccggag
     4021 cgagaaccac ctcggcttcc ggagcgcctc gacccaggtc ttcacccggc tgatcgaagg
     4081 accttacccc aactacgagc aggtgatccc gcgggagaac gacaaggccg ccaccgccga
     4141 caaggccgct ttcaccgcgg cgctccggcg gatgagcatc gtggcgagcg accagaccca
     4201 ccggatccgg atggccttcg ccaacggctc ctgcaagctc tcggtccaga ccccggacct
     4261 gggcgaggcg caggaggaga tcacggtgag ctacgagggt gacccgctgg agatcgggtt
     4321 caacgccgcc tacctgctcg agatcctgaa gtacattccg accgacgagg tccggatgac
     4381 cttcaaggcc ccggagcggg cggcgacctg cgagccggta gggtgggacg acccggcgag
     4441 ctacctggcg ctggtcatgc cattgaggct ggtggactga agcgtctcca ccggcgcccg
     4501 taacgagtcc agcagcgaat ccatgcccgg ggtccac
//
LOCUS       DATIFF010001154         1113 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1991991, whole genome shotgun sequence.
ACCESSION   DATIFF010001154 DATIFF010000000
VERSION     DATIFF010001154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1991991"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..904)
                     /gene="trpS"
                     /locus_tag="VLD58_16865"
     CDS             complement(<1..904)
                     /gene="trpS"
                     /locus_tag="VLD58_16865"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HSB56039.1"
                     /translation="MPRIFSGIQPSGELHIGNWLGAVQNWVNLQQSYDCIFCVVDLHA
                     ITARYDHDSLAQRTRDMAIGLLACGIDPGRAVLFVQSHVPEHSELQWLLNSVTPLGEL
                     ERMTQFKDKAQRFESVPAGLLNYPVLMAADILLYRADLVPVGDDQTQHLELAREVARK
                     WNAEFGGGRDYFPEPQPILTEAKRIMGLDGQAKMSKSLGNTVGLLDSPEEIWQKLRPA
                     VTDPARVTRKDPGNPEVCNIYYLHKYFSPPETVARVADNCRGAKWGCLDCKRELADNM
                     IRTLAPIRERALALQGEAGRIDQVL"
BASE COUNT          172 a          379 c          371 g          191 t
ORIGIN      
        1 cgaggacctg atcgatccgc cccgcctcgc cctgcagagc caacgcccgc tcgcgaatgg
       61 gcgccagggt ccggatcatg ttgtccgcca gctcacgctt gcagtcgaga caaccccact
      121 tggcgccgcg gcagttatcg gccacgcgcg cgaccgtctc cggcggcgag aagtacttgt
      181 ggaggtagta gatgttgcag acctcggggt tcccgggatc cttcctggtg acccgggcgg
      241 ggtcggtgac cgccgggcgc agcttctgcc agatctcctc gggactgtcg agcagcccga
      301 cggtgttccc caggctcttc gacatcttgg cctgcccgtc caagcccatg atccgcttgg
      361 cctcggtgag aatcggctgc ggctccggaa agtagtcgcg cccgccgccg aattcggcgt
      421 tccacttgcg cgcgacctcg cgggccagct cgaggtgctg ggtctgatcg tcgccgaccg
      481 gcaccaggtc ggcgcgatac agcaggatgt ccgccgccat gagcaccggg tagttcagca
      541 ggccggccgg gacactttcg aaacgctgcg ccttatcttt gaactgcgtc atccgctcca
      601 gctcgcccag cggggtgacg ctgttgagca gccactggag ctcgctgtgc tccggcacgt
      661 gcgactgcac gaagagcacc gcccgcccgg ggtcgatccc gcaggccagc aggccgatcg
      721 ccatgtcgcg ggtgcgctgg gccagcgagt catgatcgta gcgggcggtg atggcgtgca
      781 ggtccacgac gcagaagatg cagtcgtaac tctgttgcag gttcacccag ttctggaccg
      841 ccccgagcca gttgccgata tgcagctcgc ccgaaggctg aatccccgag aatatgcgcg
      901 gcatgcccgg caagttaccc ggttccatgg atggctgcaa gacagtgtct tccttagact
      961 tactccatct ggcccggacc gctgccgagc gcgccgccgg ctacctgcgc ggggtcgagc
     1021 ggccggccgg gccggccggc tggaccctca agggcagccg tgatttcgtg accgaggtcg
     1081 accgggcggc ggagcggctg atcgccgaga tcc
//
LOCUS       DATIFF010001155         3037 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1683647, whole genome shotgun sequence.
ACCESSION   DATIFF010001155 DATIFF010000000
VERSION     DATIFF010001155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3037
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1683647"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..233)
                     /locus_tag="VLD58_16870"
     CDS             complement(<1..233)
                     /locus_tag="VLD58_16870"
                     /inference="COORDINATES: protein motif:HMM:NF024912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56040.1"
                     /translation="MCGILTVLQRGDRPVDADLTRRMRDTMAHRGPDDVGLRVEGPVA
                     LAHRRLSILDLTDAGHQPMCNEDGTIWIVFNGE"
     gene            901..2385
                     /locus_tag="VLD58_16875"
     CDS             901..2385
                     /locus_tag="VLD58_16875"
                     /inference="COORDINATES: protein motif:HMM:NF014045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HSB56041.1"
                     /translation="MHAPNAALLIDFDNVTLGIRSDLTKELKHLLNSDIIKGKVAVSR
                     AYADWRRYHQYIVPLSESSIDLIFAPAFGNNKKNATDIRLAIDAMELVFTRPEIGTFI
                     LLSGDSDFSMLVIKLKEYGKYVIGVGIRESASDLLIQNCDEYFSYSDLAGLTKETDIP
                     STQKDPWVLVKEAVAQMVREGDVMRSDRLKQVMQQIDPNFDEKNAGFSRFSKFVTEAG
                     HKGHIKITRMENGQYEVAPAEPGNNGSAAAAAPAAAPRAPAETRPPREDRSRRGRGRG
                     RGRGREREERGDQPAAPAAAEERRPEPSRRQERSEELTLAWAFDLLRRALAELPSPVG
                     HEALRLRMSALHGREDQMLDPSRFPRLLRQAHDAEVADVRKVGEDEFEVIGRGVEPAP
                     AARAAAAEEAGGNGAPVAVTPSESASRGGIRFRRGSRLPAAPPAIAMVGVVSLDDEPA
                     AEKPAPKGRKKPAKPAEAVADAAPREATPKKKAAKPRAKKKTEA"
     gene            2388..3008
                     /locus_tag="VLD58_16880"
     CDS             2388..3008
                     /locus_tag="VLD58_16880"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF002003.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003905 - alkylbase DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HSB56042.1"
                     /translation="MQTSRRAATLPVEFFRRDVVTVARELLGLELETTFRGCRTVGRI
                     VEVEAYLGADDPASHAYRNRRHAHNASLYLPPGTWYVYLSYGVHWCANLVAGTQGQGG
                     AVLLRAIEPVIGAAAMARRRGLRELMLLGSGPGRLCQALGITRGRLDGRIMPESQARV
                     LSPAGLPEGEILTTPRIGITKAADWPLRFLIRGSPHVSGRARRLGE"
BASE COUNT          500 a         1047 c         1048 g          442 t
ORIGIN      
        1 atctcgccgt tgaagacgat ccagatggtc ccgtcttcgt tgcacatcgg ctggtgcccg
       61 gcgtccgtca ggtccaggat cgagaggcgc cggtgggcga gggccacggg accctcgacc
      121 cgcagcccga cgtcatcggg gccccgatgg gccatggtat cgcgcatgcg gcgggtgagg
      181 tcggcatcca ccggccggtc gccgcgttgc agcacggtca gaatcccgca catggatcag
      241 ttgttctccc gcgccttgca tcgttccgac tgccgggcga cggtggaggt tcttcgcgct
      301 ggtacggcag acgccaggtc cggccactgc gtttcccacg gccgggcacg gagtcacggg
      361 catctgggtt tgggtgcggc ctcctcgacc gcaatagccg agccggaagg tcgtcgtggg
      421 tcacggcgcg gcccaacacc ggcgccgcgc caagggggcc ttccaggcca gccgcccgga
      481 gggctgggat ggccacgccg gcgagcggat cattgccctt ctggcggggg actgaggccg
      541 tccccctacc cgtatcttct tcaccgacat agattttcgt cggcctgcgc aggcccattc
      601 ctgccttcct ccacctttcc ccgcggggca cccggtgccg cggcggaatg ctggaactcg
      661 cggaatccgt tccgagaaat cccaggaagg ctcgaggcgc cgcgcaaggc cgcagctgcg
      721 gtcaatggga ccgccgcatc atcttccgaa gctagtgcgc gccgctggca caccaatccc
      781 gcatgacttc ccggcaccgg gtccgggcag gtcagcgagc cggtgccggt ggcgtgcgcg
      841 gagttctcca aacctgtgac gacaccccac ctgcgacacc tccgctccgg ggaacccccg
      901 gtgcacgccc ccaatgccgc cctgctgatc gacttcgaca acgtcacgct gggcatccgc
      961 tccgacctca cgaaggaact gaagcacctc ctcaacagcg acatcatcaa gggcaaggtc
     1021 gcagtgtccc gcgcctacgc cgactggcgc cgctatcacc agtatatcgt gccactgtcg
     1081 gagtcgtcga tcgacctgat cttcgctccc gccttcggca acaacaagaa gaacgcgacc
     1141 gacatccggc tcgccatcga tgcgatggag ctggtattca cccgccccga gatcggcacc
     1201 ttcatcctgc tctcgggcga cagcgacttc tcgatgctgg tgatcaagct gaaggagtac
     1261 ggcaagtacg tgatcggggt ggggatccgc gagagcgcga gcgacctgct gatccagaac
     1321 tgcgacgagt acttctccta ctccgacctc gccggcctca ccaaggaaac cgacattccc
     1381 tcgacccaga aggatccctg ggtgctggtg aaggaggcgg ttgcccagat ggtccgcgaa
     1441 ggcgatgtga tgcgctcgga ccgtctcaag caggtgatgc agcagatcga ccccaacttc
     1501 gacgagaaga acgccgggtt cagccgcttc agcaagttcg tgacggaggc gggccacaag
     1561 ggccacatca agatcacccg gatggagaac gggcagtacg aggttgctcc cgcggagccc
     1621 ggcaacaatg gcagtgccgc tgcggccgcg ccggctgccg ccccacgcgc gccggctgaa
     1681 acgcgtcccc cgcgcgaaga tcgcagccgc cggggccggg gccggggacg cgggcggggc
     1741 cgggagcgtg aggaacgggg cgaccagccg gccgcgccgg cagccgcgga agagcggcgg
     1801 ccggaaccgt cccgccgtca ggagcggagc gaggagctca ccctggcctg ggccttcgac
     1861 ctgctgcgcc gcgccctggc ggagttgccg agcccggtcg gccacgaggc gcttcggctc
     1921 cggatgtccg ccctccatgg gcgcgaggat cagatgctgg atccctcgcg cttcccgcgg
     1981 ctgctgcgcc aggcgcacga cgccgaggta gcggatgtgc ggaaggtggg cgaggacgaa
     2041 ttcgaggtga ttggccgggg cgtcgagccc gcgcctgccg ctcgcgcggc ggccgcggaa
     2101 gaggctggtg gcaacggggc acccgtcgcc gtgacgccca gcgagagcgc cagccgtggg
     2161 ggaatccggt tccgccgcgg atcgcggctt ccggccgccc cgccagccat cgcgatggtc
     2221 ggggtggtga gtctcgacga cgagcccgcg gcagagaagc cggcccccaa gggcagaaag
     2281 aagcctgcga agcccgccga ggctgtagcc gacgccgccc cccgggaggc gaccccgaag
     2341 aagaaggcag ccaagcctcg agccaagaag aagaccgagg cctgagaatg cagacttcac
     2401 gacgggcagc gacgctgccc gtcgagtttt ttcggcgtga cgtcgtgacg gtcgcccgcg
     2461 agctgctcgg cctggagctc gagaccacct tccgcggctg ccgcacggtg ggtcggatcg
     2521 tcgaggtcga ggcctacctc ggcgccgatg atccggcctc acacgcctat cgcaatcgcc
     2581 gccacgccca caacgcctcg ctctacctcc cgcccggtac ctggtacgtc tacctgtcct
     2641 acggcgtgca ttggtgcgcc aacctggtgg cgggcaccca agggcagggc ggagcggtcc
     2701 tgctccgggc catcgaaccg gtgatcgggg cggctgccat ggcccggcgc cgagggctcc
     2761 gtgagctgat gctgctcggc tccgggccgg gacggctgtg ccaggcgctg ggaatcaccc
     2821 gcggtcggct ggatggccgc atcatgccgg agtcccaggc gcgggtgctt tcgccagccg
     2881 gattgccgga gggagaaatc ctgacgacgc cccgcatcgg catcaccaag gcggcggact
     2941 ggccgctccg gttcctgatt cgggggtcgc cccatgtctc gggaagggcg aggcgtttgg
     3001 gggagtgaaa acaaagagcg ggcgggtcga ctgaccc
//
LOCUS       DATIFF010001156         1393 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_761562, whole genome shotgun sequence.
ACCESSION   DATIFF010001156 DATIFF010000000
VERSION     DATIFF010001156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1393
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_761562"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1044)
                     /locus_tag="VLD58_16885"
     CDS             complement(<1..1044)
                     /locus_tag="VLD58_16885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56043.1"
                     /translation="MAAAVAAGRERLTAFMWTQPVRRRRALLLVGHHVLDRMERTNSR
                     RVPVPERDLVEDTCLTDRKTIRTALRLLNGPLGLLDTETWDPARRADSSFEFEIPEAP
                     DPGVREIPPPSSHTPLPRGTWSQLPGPSHALWRQLPDATGPPLTASQLAWRSGLTDFR
                     DQAPTQSQLRSTQAALTALAAAGLAHCAADATWSRRSTITSDHAERSTARHAEISAIV
                     AAERRRYRAAGASWQRARARALKQQISRERAWWHGLEATERVQRRTEWVRRFDQLPVQ
                     KQERLKARLATKRVRAGMDERARHAEWVASMDSDEFLERSVTRQQRFEGLAPPLQQAF
                     AASWQRHRARFGID"
BASE COUNT          180 a          458 c          535 g          220 t
ORIGIN      
        1 gtcgattccg aagcgggcac ggtgtcgctg ccaggatgct gcgaaagcct gctgcaacgg
       61 tggagccaga ccttcgaaac gctgctgtcg ggtcacactg cgctcaagga actcgtcgga
      121 gtccatgctc gccacccact cggcgtgccg tgcccgctcg tccatcccgg cgcgcacgcg
      181 cttggtcgcg agtcgtgcct tgagtcgttc ctgcttctgc accggcaact ggtcgaaccg
      241 acgcacccac tcggttctgc gctgcacccg ttcggtcgcc tccaggccat gccaccaggc
      301 gcgttccctg ctgatctgct gtttcaacgc tcgtgctcga gcacgctgcc acgacgcacc
      361 agccgctcgg tacctacgac gttctgcggc cacgatcgcg ctgatctcgg cgtgtctcgc
      421 cgtggagcgt tcggcgtggt cgctcgtgat cgtgctcctg cgactccagg tggcatctgc
      481 cgcgcagtgg gccaggccgg cagctgccag cgcggtgagt gcggcctggg ttgagcgcag
      541 ttggctttgc gtgggtgcct ggtcccgaaa gtcggtgagg ccactgcgcc aagcgagctg
      601 gctggcggtc agcggagggc cagtcgcgtc agggagctgg cgccagaggg cgtggctggg
      661 tccgggcagc tggctccagg tgccgcgggg gaggggggtg tgagaactag gtggggggat
      721 ttcccgcacc cccgggtcgg gggcctcggg gatttcgaac tcgaaggagg agtcggcgcg
      781 ccgcgccggg tcccaggtct cggtgtcaag caggcccagc ggcccgttga ggagccggag
      841 tgcggtgcgg atggtcttgc ggtcggtcag gcaggtgtcc tcgaccaggt cccgctcggg
      901 cacggggacg cgccgcgagt tggtgcgctc catgcggtcg aggacgtggt gaccaacgag
      961 cagcagagcg cggcgccggc gtaccggctg ggtccacatg aacgcggtga gccgttcccg
     1021 gccggccgct acggcggccg ccaccgcagg cgaggggtcc ggggcagggc agtgggcccg
     1081 gtcctcctcg acagcccggt tccagaccca ggcaacccag cggcgctttg acgcgcgggc
     1141 gcggaccatc gcggccgggt gggcaccgag gatctcggcc caggcggttt ccgcggtgtg
     1201 accggcgcgc agcagatggc cggtggcgat cgcctcgatc gtggagcggg accggtcctc
     1261 gccgccgatg ggcgggacgg ctcccgtggt gaggtacgtc gcccactccg gagggaggtc
     1321 gcggcgcggc cgcggacgcg gggtgagcgc cgtcagagga ccggctgtgg caccccgcga
     1381 ggcatcacgg tca
//
LOCUS       DATIFF010001157         1323 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1224628, whole genome shotgun sequence.
ACCESSION   DATIFF010001157 DATIFF010000000
VERSION     DATIFF010001157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1224628"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(234..>1323)
                     /gene="mgtE"
                     /locus_tag="VLD58_16890"
     CDS             complement(234..>1323)
                     /gene="mgtE"
                     /locus_tag="VLD58_16890"
                     /inference="COORDINATES: protein motif:HMM:TIGR00400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HSB56044.1"
                     /translation="GEIVDELPDDEAADLVGSLDPEDQERILAEVEDRADIEELLRYD
                     PETAGGIMTAQVVTVRATDSAGEAIESLRRQAEEIEDFSQVYVVDEQDHLLGVLPIKR
                     LVTSPANRTVVEIMDDTEVRVTPETDQEEVARVIGRYNVPAVPVVDGGGKLLGQVTFD
                     DVIDVVEAEQTEDLLKFGGTSADEELSAPWHGAVRSRLPWLLINLVTAFAAGAVASYF
                     SGKVAAVQALIFWMPVIAGMGGNGGTQALAVTVRRVALGLVPVGKALPIIGKEMLAGL
                     ANGAVNGIAAALVATALGHGHTLGLVVFLAMTGNLFVAGFAGAFIPLLLNRFGIDPAI
                     ASSIFVTTFTDVCGYSLLFGLAGLLLGV"
BASE COUNT          220 a          479 c          414 g          210 t
ORIGIN      
        1 cccctccgca atgttggacg cggcggacac ggccgcacgt cgtatctggg cgatgagccc
       61 gaacatctca tggcgtggcc acttctgggt ggccttgtag atgaggagga ccagccggtg
      121 agaatgctgc caggcggcga accgatcgtg tggaggcatg ctgcacgata ggccttcgcc
      181 tcaaaccaac gtcaaatacc ccctgccgcc ttgccgcttt gccgctttgc cgcctacacg
      241 ccgagcagca gccccgccaa cccgaatagc agcgaatacc cgcagacatc ggtgaaggtg
      301 gtcacgaaga ttgatgacgc aatcgccgga tcgatgccga agcggttcag gaggagggga
      361 atgaaggcac cggcgaagcc ggccacgaag agattgcccg tcatcgcgag gaacaccacc
      421 aggcccaggg tgtgcccgtg ccccagcgcg gtggccacca gcgcggccgc gatgccgttg
      481 accgcaccgt tggccagacc cgccagcatc tccttgccga tgatcgggag cgccttcccg
      541 accgggacca ggcccagcgc cacccgccgc accgtgaccg ccaatgcctg ggtgccgccg
      601 ttgccgccca tgcccgcgat gaccggcatc cagaaaatga gcgcctgcac cgcggcgacc
      661 ttgccactga agtagctcgc caccgcgccc gcggcaaagg cggtgaccag gttgatgagc
      721 agccagggga gccggctccg caccgcgcca tgccacggcg ccgacagctc ctcgtcggcg
      781 gaggtgccgc cgaacttcag caggtcctcg gtctgttccg cttcgaccac gtcgatcacg
      841 tcgtcgaagg ttacctgccc cagcagcttg ccgccgccat cgaccaccgg caccgccggc
      901 acgttgtagc gcccgatcac ccgcgccact tcctcctggt cggtttcggg cgtcacccgg
      961 acctcggtgt cgtccatgat ctcgaccacc gtacgattgg ccgggctcgt caccagccgc
     1021 ttgatcggca ggaccccgag gagatggtcc tgttcgtcga ccacgtagac ctggctgaag
     1081 tcctcgatct cctcggcctg gcgccgcagg gattcgatcg cttcgcccgc cgagtcggtg
     1141 gcccggaccg tgaccacctg ggcggtcatg atgccgccgg cggtctccgg gtcgtagcgg
     1201 agcagctcct cgatgtccgc ccggtcctcg acctcggcga gaatccgttc ctgatcctcg
     1261 ggatcgaggc tgcccaccag gtcggcggcc tcgtcgtccg gcagctcgtc gacgatttcg
     1321 ccg
//
LOCUS       DATIFF010001158         1680 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1224984, whole genome shotgun sequence.
ACCESSION   DATIFF010001158 DATIFF010000000
VERSION     DATIFF010001158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1680
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1224984"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..385
                     /locus_tag="VLD58_16895"
     CDS             <1..385
                     /locus_tag="VLD58_16895"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSB56045.1"
                     /translation="VRASHDPLRGITEAALLGIAQDPAKHELGKATFSTMCASCHRPD
                     AGGNIGPNLTDAWWLHGGKPLEILNTVNTGVLTKGMPAWGKMLKPDQLLAVVGYVTTL
                     QGTNPPNPKPPQGVRADSVAAPPAP"
     gene            405..>1680
                     /gene="ccoG"
                     /locus_tag="VLD58_16900"
     CDS             405..>1680
                     /gene="ccoG"
                     /locus_tag="VLD58_16900"
                     /inference="COORDINATES: protein motif:HMM:TIGR02745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HSB56046.1"
                     /translation="MSVTARGPAEAPHRVLSTLNEDGSRRWIRPKPAGGKFLVRRRAV
                     AYGLMFVFFIIPYLRLGGKPLVLLDLPHRRFIILGTTFLPTDTLLFMLLFVSVAIAIF
                     LLTALFGRVWCGWACPQTVYMEFLFRPLERLLEGGRSGTLRIDAGKGPSARRFAKYAV
                     YLVLALFLAHTFLAYFVGVDALAQWVRRSPVEHPTSFLVMAGTTALIFFDFTWFREQT
                     CLVACPYGRLQSVLLDRQSLIVGYDAGRGEPRGKHLKDRPGTAGDCIDCQACVLTCPT
                     GIDIRDGLQMECIHCTQCADACDAVMTKIGKPVGLIRYGSRDGFEGRPKHLLRPRVVL
                     YPLALAVAVGLLGYNLAVREDTEVTILRGLGAPYSFEPDGHVVNQIRIRVRNRAESAR
                     RYAIALAGLDEARLVAPDNPLAVAPGEFNTTSV"
BASE COUNT          253 a          594 c          566 g          267 t
ORIGIN      
        1 ggtccgggcg agtcacgacc cgctccgcgg aatcaccgag gcggcgctgc tcggcatcgc
       61 gcaggatcca gccaagcatg agctggggaa ggcgaccttc agcaccatgt gcgcgtcctg
      121 ccaccgcccc gatgccggcg gcaacatcgg gccgaacctg accgatgcct ggtggctcca
      181 tggcggcaag ccgctcgaga tcctgaacac ggtgaacaca ggcgtgctga ccaagggcat
      241 gccggcgtgg ggcaagatgc tcaagccgga ccagctgctc gccgtagtgg gctacgtcac
      301 cacgctgcaa ggcaccaatc cgccgaatcc caagccgccg cagggtgtcc gcgccgattc
      361 ggtggcggcg ccaccggcgc cataacggag cggaagccgg gaagatgagc gtcaccgcga
      421 gaggtccggc cgaagcgccg caccgcgtcc tgtccaccct gaacgaggac gggtcgcggc
      481 gctggatccg gcccaagccg gccgggggaa agttcctggt ccggcggcgc gccgtggcgt
      541 acgggctgat gttcgtcttc ttcatcatcc cgtacctgcg gctcggggga aagccgctgg
      601 tgctcctcga tctgccccac cgccggttca tcattctcgg caccaccttc ctgccgaccg
      661 acacgctcct gttcatgctg ctgttcgtga gcgtggcgat cgcgatcttc ctgctcacgg
      721 cgctcttcgg ccgggtgtgg tgcgggtggg cctgcccgca gaccgtgtac atggagttcc
      781 tcttccggcc gctcgagcgc ctcctcgagg gcgggcgcag cgggacactg cggatcgatg
      841 cggggaaagg cccatccgcg cgccggttcg ccaaatacgc ggtgtacctc gtcctggcgc
      901 ttttcctggc ccataccttc ctggcctatt tcgtcggggt cgacgcactg gcacaatggg
      961 tgcgccggtc gccggtggag caccccacct cgttcctcgt catggcggga acgaccgcac
     1021 tcatcttctt cgatttcacc tggttccgcg agcagacctg cctcgtggcc tgcccctatg
     1081 ggcggctcca gtcggtcctg ctggaccggc agtcgctcat cgtcggctat gatgccggac
     1141 gcggcgagcc ccgcgggaag cacctcaagg atcgccccgg caccgccgga gactgcatcg
     1201 actgccaggc ctgcgtgctg acctgtccca ccgggatcga catccgggac gggctccaga
     1261 tggagtgcat ccactgcaca cagtgcgccg acgcctgcga cgccgtgatg acgaagatcg
     1321 gcaagccggt cggcctgatc cggtacggga gccgggacgg cttcgagggg cgcccgaagc
     1381 acctcctccg gccgagggtg gtgctctacc ccctggcgct cgcggtggcg gtcggcctgc
     1441 tcggctacaa cctggcggtc cgggaggaca ccgaggtgac gatcctccgg ggcctcgggg
     1501 cgccgtacag cttcgagccc gacgggcacg tggtcaacca gatccggatc agggtccgca
     1561 accgcgcgga gagcgcgcgg cgctacgcga tcgcgctcgc cggcctcgac gaggcccgcc
     1621 tcgtggcgcc ggacaatcca ctggccgtcg ctccgggcga gttcaacacc acgagcgtgt
//
LOCUS       DATIFF010001159         3928 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_453200, whole genome shotgun sequence.
ACCESSION   DATIFF010001159 DATIFF010000000
VERSION     DATIFF010001159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3928
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_453200"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..656)
                     /locus_tag="VLD58_16905"
     CDS             complement(<1..656)
                     /locus_tag="VLD58_16905"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB56047.1"
                     /translation="MTAPAPDPLFLELQSVLAGRYSLERELGRGGMGIVYLARDVALD
                     RLVAIKLFPPDLAARPALRERFLREARTAARLSHPNIVPIHAVEEAGRLVWFVMAYVP
                     GESLGQRLGRGALTPADASRILRDVAWALGYAHSQGVVHRDVKPDNILLETGGRRALV
                     ADFGIAAPSRGELGTEGTVVGTVAYLSPEQARGDAVDGRSDLYALGVVGYRALADRLP
                     "
     gene            complement(824..1753)
                     /locus_tag="VLD58_16910"
     CDS             complement(824..1753)
                     /locus_tag="VLD58_16910"
                     /inference="COORDINATES: protein motif:HMM:NF013078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc dependent phospholipase C family protein"
                     /protein_id="HSB56048.1"
                     /translation="MSAHRALIALAAVGLVILLFPHPLLAWTPGTHIYLGESVLANLS
                     ALPSAIADLVRAFPFDFLYGNIAADSSIAKKYAPVGRHCHSWHVGQEIYDLARTDALR
                     AFGLGYLSHLAADVVAHNFFVPRQLVLTSSSTGLGHSYWESRFERPLGDAFARTAKEV
                     ILLDHTPADSHLDEIIAPTIFSVKTNRRLFRGMVHLTESQGWHRAFQVAEKGSRWGLP
                     TTDVERHMALSFDYIMAMLAEPDAEPRHLDPAGDAPLRSAKRMRREALLAGGWRDADR
                     LRDTAEKHFGLPERQLDFWPVAALKKPWVADSV"
     gene            complement(1750..2205)
                     /locus_tag="VLD58_16915"
     CDS             complement(1750..2205)
                     /locus_tag="VLD58_16915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF948 domain-containing protein"
                     /protein_id="HSB56049.1"
                     /translation="MLLLQSGAVPDWVGPTMAISLLVIALSFVIIAIAVALTARQAVE
                     EMRQLSKMVDGLRGDLAPSLKLVQSFAGQGEKLVEAVTGETEEIVRASRALRTGLERR
                     FENLQVVYDVLAEEVEETAVEAAVTLRSLRGEIGWFGMLRRLLRLGRRR"
     gene            2320..3600
                     /gene="murA"
                     /locus_tag="VLD58_16920"
     CDS             2320..3600
                     /gene="murA"
                     /locus_tag="VLD58_16920"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HSB56050.1"
                     /translation="MPPRFLVTGGRRLTGVVRPAGNKNAALPAIAATLLADGPVELGN
                     IPRIRDVETMLALVADLGATVEWIGSNTVRIDARGATAKPLNPDLCARIRASILLAGP
                     LLARFGTVQLPPPGGDVIGRRRVDTHFLALEQLGAQLTVGERFEIEARQLKGAEIFLD
                     EPSVTGTENALMAAVSAKGRTVLRNAAAEPHVQDVARLLVAMGATIEGIGTNVYTIEG
                     GQPLKACSYAIGPDHIEIASFIGLAAVTNGALRIEGVRGDDLRSTLLGFERLGVRPRL
                     DGDHLIVDADQERRIRPDLGGHVPKLEDGPWPAFPADAMSIAVVTATQCEGMVLVFEK
                     MFESRLFFVDKLIGMGARIVLCDPHRVVISGPARLRGGTVESPDIRAGMAMLLAALAA
                     EGTSTIHNVGQIERGYENIDERLRGLGAEIKRLE"
     gene            3734..>3928
                     /locus_tag="VLD58_16925"
     CDS             3734..>3928
                     /locus_tag="VLD58_16925"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF013780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase"
                     /protein_id="HSB56051.1"
                     /translation="MTDKITKPESDWQALLTPEQYRVARQHGTEPAFTGEYWNSHEAG
                     VYRCVACGSPLFKSDDKFDSG"
BASE COUNT          653 a         1311 c         1366 g          598 t
ORIGIN      
        1 tagggcagcc ggtcggcgag ggcgcgatac ccgaccacgc cgagcgcgta gaggtcgctt
       61 cgcccgtcga ccgcatctcc ccgggcctgt tccgggctca ggtaggcgac cgtcccgacc
      121 acggtgcctt cggtcccgag ctcaccccgg ctcggcgccg cgatgccaaa atcggcgacc
      181 agggcgcggc gtcctccggt ctcaagcagg atgttgtcgg gcttcacgtc ccggtgcacc
      241 accccctggc tgtgggcgta gccaagggcc caggccacat cccggaggat ccggctggca
      301 tcagccgggg tcagcgcgcc ccggccgagc cgctggccca ggctctcgcc cggcacatag
      361 gccatgacga accagaccag tcgcccggct tcctcgaccg cgtgaatcgg gacgatgttg
      421 gggtgggaga gtcgggcggc ggtgcgggcc tcgcgaagga accgttcgcg gagcgcgggg
      481 cgggcggcga gatcgggcgg aaacaacttg atggcgacga gacggtcgag cgcgacatcg
      541 cgggcgaggt agacgatgcc cataccgcct cggcccaact cgcgctccag cgaatagcgg
      601 ccggcgagga cgctctggag ttcgaggaag aggggatcag gtgcgggcgc ggtcatgtgg
      661 catcactagc gacggtccgt gtcaggcggc catcgggttt caccacagag acacagagga
      721 cacagagaag agcgggagac gaagtgaatc taacaacagt atcccggtct tctgcagttc
      781 tccgtgtcct ctgtgcctct gtggtgaacc tgggagcctg tcctcagacg gaatccgcca
      841 cccacggctt cttcagcgcc gccaccggcc agaagtccag ctgacgctcc ggcagcccga
      901 agtgtttctc ggcggtgtcg cgcagccggt cggcgtcgcg ccagccgccg gcgagcagcg
      961 cctcgcggcg catgcgcttg gcgctccgga gcggagcgtc cccggcgggg tcgaggtgcc
     1021 gcggctccgc gtccggctcc gccagcatcg ccatgatgta gtcgaacgag agcgccatgt
     1081 gccgttcgac gtcggtggtg ggaaggcccc aacggctgcc tttctccgcc acctggaagg
     1141 cgcggtgcca gccctgcgac tcggtgagat gcaccatccc gcggaagagc cggcggttgg
     1201 tcttcacgct gaagatcgtc ggcgcgatga tctcatccag gtgcgagtcg gcgggggtgt
     1261 ggtcgagcag gatcacttcc ttggcggtcc gcgcgaaggc gtcacccagg ggacgctcga
     1321 agcggctctc ccagtacgag tgtcccaggc cggtgctcga gctggtcagc accagctggc
     1381 gggggacgaa gaagttgtgg gcgaccacgt cggcggcgag gtgggagagg tagccgaggc
     1441 cgaaggcccg gagcgcatcg gtgcgggcca ggtcgtagat ctcctggccg acatgccacg
     1501 agtggcagtg gcgtccgacc ggagcgtact tcttcgcgat cgagctgtcg gccgcgatgt
     1561 tgccgtagag aaaatcgaat gggaaggcgc gcaccaggtc ggcgatggcc gacgggagag
     1621 ccgagaggtt ggccaggacc gactccccga gatagatgtg cgtccccggg gtccaggcca
     1681 ggagcggatg gggaaagagc aggatcacga gcccgaccgc cgccagcgcg atcagggcgc
     1741 ggtgggcgct caacgccggc gccccaggcg cagcagtcgc cggagcatcc cgaaccagcc
     1801 gatctcgccg cggagcgaac gaagcgtcac cgccgcctcg acggcggtct cttccacttc
     1861 ttcggcgagg acgtcgtaga ccacctgcag gttctcgaag cgccgctcca gcccggtccg
     1921 gagggcccgg gaggcacgca cgatctcctc ggtctcgccg gtcacggcct cgaccaactt
     1981 ctcgccctgg ccggcgaacg actggaccag cttgagcgac ggggccaggt cgccccgcag
     2041 gccatcgacc atcttcgaca gctggcgcat ctcttccacg gcctgacggg cagtcagggc
     2101 cacggctatt gcgatgatga cgaaggaaag ggcgatgaca agcagggaga tggccatggt
     2161 gggaccgacc cagtccggca ccgcgcctga ttgcagaaga agcattgggg tctcgcttcc
     2221 gaacgttccg agggccgggg tccacgatca ggtccgccgg tgagaagcgc aagataatgc
     2281 tgcgcttgac gcccgcacca tgcgtctcaa gtattcgcca tgcctccacg cttcctggtc
     2341 accggtggcc gccgcctcac tggcgtggtc cgccccgctg gcaacaagaa cgctgcgctt
     2401 ccggccatcg ccgccacgct cctggccgat ggtcccgttg aattgggcaa cattccgcga
     2461 attcgcgacg tggagacgat gctcgccctg gtggcagacc tgggcgccac cgtcgagtgg
     2521 atcgggagca acaccgtccg gattgatgcg cggggcgcca ccgccaagcc tctcaatccg
     2581 gacctgtgcg cccggatccg ggcctcgatc ctgctcgcgg gtccgctcct ggctcgcttc
     2641 ggcacggtac agctcccgcc gcccggcggc gacgtgatcg gccgccggcg ggtcgacacc
     2701 cacttcctgg ccctggagca gctcggggcc cagctcacgg tgggcgagcg cttcgagatc
     2761 gaggcccgtc agctcaaagg ggcggagatc ttcctggacg agccctcggt gaccggcacc
     2821 gagaacgccc tgatggccgc cgtctcggcc aagggacgca ccgtgcttcg caacgcggcg
     2881 gcggaaccgc atgtgcagga cgtggcccgg ctcctggtcg cgatgggagc cacgatcgag
     2941 gggatcggca cgaacgtcta caccatcgag ggcggccagc ccctcaaggc gtgcagctat
     3001 gccatcggcc ccgatcatat cgagatcgcc agcttcatcg gcctggcggc cgtgaccaac
     3061 ggcgccctcc ggatcgaagg ggtccggggc gacgacctcc ggagcaccct cctcggcttc
     3121 gagcgcctgg gggttcggcc ccgtctcgac ggcgaccacc tgatcgtcga cgccgaccag
     3181 gagcggcgga tccgccccga cctgggcggc cacgtcccga agctcgagga cggaccctgg
     3241 ccggcgttcc cggcggacgc catgtcgatc gccgtggtga ccgccactca gtgcgagggg
     3301 atggtgctgg tcttcgagaa gatgttcgag tcgcggctct tctttgtgga caagctgatc
     3361 ggcatgggtg cccggatcgt gctctgcgat ccgcaccggg tcgtgatctc gggcccggcc
     3421 cgcctgcggg gcgggaccgt ggagtccccc gatatccgcg ccggcatggc gatgctgctc
     3481 gcggcgctgg cggccgaggg caccagcacc atccacaacg tggggcagat cgagcggggc
     3541 tacgagaaca tcgacgagcg gctgaggggc ttgggggcgg agatcaagcg gctggagtag
     3601 gggccgttag ccattagccg ttagctatta ggtttatccg tgaaggggat ggaacggtgc
     3661 ggctttcaag ccggcgccat cctgtacatc gatctcctaa cggctaatgg ctaatggcta
     3721 acggcctcat ctcatgaccg acaagatcac caagcccgaa tccgactggc aggccctgct
     3781 tacgccagag cagtaccgcg tcgcccggca gcatggcacc gagcccgcct tcaccggaga
     3841 gtactggaac tctcacgagg ccggcgtcta ccggtgcgtt gcctgtggca gccccctctt
     3901 caaatccgac gacaagttcg attccggt
//
LOCUS       DATIFF010001160         1317 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1070905, whole genome shotgun sequence.
ACCESSION   DATIFF010001160 DATIFF010000000
VERSION     DATIFF010001160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1070905"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            72..674
                     /locus_tag="VLD58_16930"
     CDS             72..674
                     /locus_tag="VLD58_16930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase domain-containing protein"
                     /protein_id="HSB56052.1"
                     /translation="MSLVNFTAREITCKIVYYGPGRSGKTTNLQYVYGRVPESRRGRM
                     VSLATQTDRTLFFDFLPLELGSISGFTTKFQLYTVPGQSYYNATRKLVLQGADGVVFV
                     ADSQARRFDDNLESLQNLQDNLLSEGVDVRQLPVVFQYNKQDLPRDLILAPEEMDDAL
                     NFRAVPSFGADSLHGSGVFETLRGISEMVLKRLAAGTPAA"
     gene            671..>1317
                     /locus_tag="VLD58_16935"
     CDS             671..>1317
                     /locus_tag="VLD58_16935"
                     /inference="COORDINATES: protein motif:HMM:NF012529.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA/Hda family protein"
                     /protein_id="HSB56053.1"
                     /translation="MTVTLNPLYRFDTFVVGAANRLAVTAAKAVAEAPGTVYNPLFIY
                     ARPGLGKTHLLMGIGHAARAINPRLQVEYLTLDEFVEAFHAAIAAGHGEAYRKRFLDV
                     DLLLVDDVQFLTNRREMQAELLRLTDALQTANRQIVLTSDRPPAEIEALDERLIRRFA
                     GGLIIDVSAPDYETRVAILRRKAEERRATFADGVMEAVAGLGIDNVRELLGALNRL"
BASE COUNT          216 a          470 c          429 g          202 t
ORIGIN      
        1 tgcccgccct ggcggagaac ttcgagcacg acctgaacac cagtctcaaa gcgctcttcg
       61 gacggtaacg catgtcgctc gtcaacttca cggcacgcga gatcacctgc aagatcgtct
      121 actacggacc cggccggtcc ggcaagacga ccaacttgca gtacgtctac gggcgggtgc
      181 cggagagccg acgggggcgc atggtgtcgc tcgcgaccca gaccgaccgt accctgttct
      241 tcgatttcct ccccctcgag ctggggagca tctccggctt caccaccaag ttccagctct
      301 acaccgtgcc gggccagagc tactacaacg ccacccggaa gctggtgctg cagggcgcgg
      361 acggcgtcgt cttcgtggcc gacagccagg ctcgtcgctt cgacgacaac ctggagagcc
      421 tgcagaacct gcaggacaac ctgctgagcg agggggtgga cgtccgccag ctgccggtgg
      481 tgttccagta caacaagcag gacctgccgc gggacctgat tctggcgccc gaggagatgg
      541 acgacgcgct gaatttccgg gcggtgccca gcttcggggc cgactcgctc catggcagcg
      601 gggtgttcga gacccttcgg ggcatttcgg aaatggtcct caagcgcctc gcggcgggga
      661 cgccggccgc gtgaccgtca cgctcaaccc cctctaccgc ttcgacacct tcgtcgtcgg
      721 ggccgccaac cgcctcgcgg tcaccgccgc caaggcggtg gccgaggccc ccggcacggt
      781 ctacaacccg ctgttcatct acgcccggcc ggggctgggc aagacccacc tgctgatggg
      841 catcgggcac gccgcccggg cgatcaaccc gcggctgcag gtggagtatc tcaccctcga
      901 cgagttcgtc gaggcgttcc acgccgcgat cgccgccggc cacggcgagg cctaccggaa
      961 gcggttcctg gacgtggacc tcctgctggt ggacgacgtc cagtttctca ccaaccggcg
     1021 ggagatgcag gccgagctgc tccgcctcac cgacgcgctc cagaccgcca accgccagat
     1081 cgtgctgacc agcgaccgcc cgccggccga gatcgaggcc ctggacgagc ggctgatccg
     1141 gcgattcgcc ggcgggttga tcatcgacgt gtccgcgccc gattacgaga cccgggtcgc
     1201 catcctgcgc cgcaaggcgg aggagcgccg ggcgaccttc gccgatgggg tgatggaggc
     1261 ggtcgccggt ctcggcatcg acaacgtgcg cgagctgctc ggcgccctca accggct
//
LOCUS       DATIFF010001161         1487 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_453539, whole genome shotgun sequence.
ACCESSION   DATIFF010001161 DATIFF010000000
VERSION     DATIFF010001161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1487
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_453539"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..716
                     /locus_tag="VLD58_16940"
     CDS             <1..716
                     /locus_tag="VLD58_16940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683113.1"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HSB56054.1"
                     /translation="ALIHGGIANDAGVEVVWLSSDEFTDQAAAGRFLAGMDGLLVPGG
                     FGIRGIDGMIQAIRWARENQLPFFGICLGLQVAVIEFARHVCGMADTSSTEFEPECES
                     PVIAIMANQREVKDMGGTMRLGAYAARLRPGSRAAQAYGTQQISERHRHRWEVNNAYR
                     DVLAEHGLRLSGQSPDGGLVEMVELPDHPWFLGCQFHPELKSRPNRPHPLFAAFVGAA
                     LARHQRPQTPATPLVSTAR"
     gene            721..>1487
                     /gene="kdsA"
                     /locus_tag="VLD58_16945"
     CDS             721..>1487
                     /gene="kdsA"
                     /locus_tag="VLD58_16945"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HSB56055.1"
                     /translation="MSWTFGSTPFLIAGPCAVEAGEVLPKVAETLARLQVTLGIPVCF
                     KASFDKANRARLDAPRGPGLDAGLEALARIKRDFGLPVLTDIHEPSQAAAAAEVVDAL
                     QVPAFLCRQTDLLLAAGRTGRPVNLKKGQWLAPEAMTGAVEKVRAGGSRDIAVTERGT
                     SFGYGDLVVDMRNFGRLKAATGVPVIFDATHAVQRPGQGPGGASGGARDQIPALLAGA
                     AAAGAGGFFLETHPAPEQALSDAATQWPLHELEELMRR"
BASE COUNT          221 a          501 c          533 g          232 t
ORIGIN      
        1 aggcgttgat ccatggcggc atcgccaacg acgcgggagt cgaggtggtg tggctctcga
       61 gtgacgagtt caccgatcag gccgccgccg ggcggttcct cgccggcatg gacgggttgc
      121 tggttccggg tggcttcgga atccggggga tcgacgggat gatccaggca atccggtggg
      181 cccgcgagaa ccagctgccg ttcttcggca tctgtctggg actccaggtg gcggtgatcg
      241 agtttgcccg ccacgtctgc ggaatggccg acaccagcag caccgagttc gagccggagt
      301 gcgaatcgcc ggtcatcgcc atcatggcca atcagcgcga agtgaaggac atgggcggca
      361 ccatgcggct cggcgcctat gcggcgcggc tccgcccggg ctcccgcgcc gcccaggcct
      421 acgggaccca gcagatcagc gagcggcacc gccatcgctg ggaagtgaac aacgcctatc
      481 gcgacgtgct ggcagagcac gggctccggc tctcgggcca gtcgcccgac ggcggcctgg
      541 tcgagatggt ggagctgccg gaccatccct ggttcctcgg ctgccagttc catcccgagc
      601 tcaagtcccg gcccaatcgc ccgcacccgc tgttcgcggc ctttgtgggc gcggccctcg
      661 cgcggcatca gcgtccgcag acgccggcga cgccgctggt cagcaccgca cgctgatcgc
      721 atgagctgga ccttcggcag caccccgttc ctgattgccg gcccctgtgc cgtcgaagcg
      781 ggcgaggtgt tgccgaaggt ggccgagacg ctggcgcgac tccaggtcac gctcgggatc
      841 ccggtctgtt tcaaggcctc gttcgacaag gccaaccggg cccggctgga tgccccgcgg
      901 ggcccgggcc tcgatgcagg gctcgaagcg ctcgcgcgga tcaagcggga tttcgggctc
      961 ccggtcctga cggatattca cgaaccatcc caggcggcgg ccgctgccga ggtggtggac
     1021 gcgctccagg tccctgcatt tctctgtcgc cagaccgatc tgctgctggc ggcggggcgg
     1081 accggccgtc cggtcaacct caagaaggga cagtggcttg cccctgaggc catgactggt
     1141 gcggtcgaga aggttcgcgc cggagggagc cgtgatatcg ccgtgaccga acggggcacc
     1201 agtttcgggt acggcgacct cgtggtcgac atgcggaatt tcggccggct caaggcggcg
     1261 accggcgtgc cggtgatctt cgacgcgact catgcggtgc agcggccggg gcagggacct
     1321 ggcggcgcca gcggcggcgc tcgggaccag atcccagccc tcctggccgg cgcggcggcc
     1381 gcgggagcgg gcgggttctt tctcgaaacc catcccgcac ccgagcaggc cctgagcgat
     1441 gcagcgaccc agtggccgct gcatgagctc gaagaactga tgcgccg
//
LOCUS       DATIFF010001162         1594 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1993538, whole genome shotgun sequence.
ACCESSION   DATIFF010001162 DATIFF010000000
VERSION     DATIFF010001162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1993538"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1430
                     /locus_tag="VLD58_16950"
     CDS             <1..1430
                     /locus_tag="VLD58_16950"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HSB56056.1"
                     /translation="GRSAGLLDIYSARETQDLYQCIEWAAAQAWSTGKIGLNGISYYA
                     MNQWQVAALQPPHLAAMCVWEGAADFYRDFIHHGGILCTFGRAWFPSQVVRVQHGRGT
                     RGYRSRMTGEWVSGPETLSEEELEASRRDFYADCFNNPLATDAYWRSRTADLTKIQVP
                     LFSAANWGGQGLHLRGNLEGFMRAGSREKWLEVHGIEHWTHFYTDYGVRLQKKFFGHF
                     LKGEDTGWAEQPRVVLQMRHPGERFVERHEQEWPLARTEWTKLYLDPAAHRLVDEPPA
                     RAASLSYAGLGHGLTFLTPPLETATEITGPLAAKLFVSSETTDADLFLVVRAFTPDLK
                     EVTFQGALDPHTPIAQGWLRASHRKLDPALSLPYRPYHTHDEPQPLTPGEVYELDIEI
                     WPTCLVVPAGYRIGLSVRGRDYEYPGGPGPGLGVLGAVFTGVGPFQHNDARDRPPAIF
                     GKRVTLHSGPERQSHLLLPIIPARS"
BASE COUNT          245 a          557 c          550 g          242 t
ORIGIN      
        1 cggggcgctc ggcgggactc ctcgacatct attcggcacg cgagacgcag gacctctacc
       61 agtgcatcga gtgggcggcc gcgcaggcgt ggagcacggg gaagatcggc ctgaacggca
      121 tctcctacta cgccatgaac cagtggcagg tcgccgcgct ccagcctccg cacctcgccg
      181 cgatgtgcgt ctgggagggg gctgccgact tctatcggga tttcatccac cacggcggga
      241 tcctctgcac cttcgggcgg gcgtggtttc cctcccaggt cgtccgggtg cagcacggcc
      301 ggggcacgcg cgggtaccgc agccggatga ccggtgagtg ggtctccggt ccggagacct
      361 tatccgaaga ggagctggag gccagccgcc gcgacttcta tgcggactgc ttcaacaatc
      421 cgctggccac cgacgcctac tggcgctcgc gcacagccga cctgacgaag atccaggtgc
      481 cgctcttctc ggccgcgaac tggggcggcc aggggctgca cctgcgaggc aacctcgagg
      541 ggttcatgcg ggccggctcc cgcgagaagt ggctggaggt gcatggcatc gagcactgga
      601 cccacttcta caccgactac ggcgtgcgcc tgcagaagaa gttcttcggc cacttcctga
      661 agggcgagga caccggctgg gcagagcagc cgagggtggt cctgcagatg cgccaccccg
      721 gggagcggtt cgtcgagcgg cacgagcagg agtggcccct ggcccgcacg gagtggacca
      781 agctctacct cgacccggcc gcgcaccgcc tggtcgacga gccgccggcc cgggccgcca
      841 gcctctcgta cgccggcctg gggcacggcc tcaccttcct cacgccgccg ctcgagacgg
      901 cgaccgagat caccgggccc ctggcggcca agctcttcgt ctcgtcggag accaccgacg
      961 cggacctctt ccttgtcgta cgagcgttca cgccggacct gaaggaggtg accttccagg
     1021 gagcgctcga cccccacacg ccgatcgctc agggttggct tcgcgcctcc catcggaaac
     1081 tggatccggc gctctcgctg ccctaccggc cgtaccacac gcacgatgag ccgcagccgc
     1141 tcacgcccgg ggaggtgtac gagctggaca tcgagatctg gcctacctgc ctggtggtcc
     1201 cggccgggta ccgcatcggc ttgagcgtcc gcgggcggga ctacgagtat ccgggcggcc
     1261 cgggccccgg cctcggcgtg ctgggcgccg tcttcaccgg cgtcggcccc ttccagcaca
     1321 acgacgcgcg tgaccggccg ccggcgatct tcgggaagcg ggtcaccctg cactcgggtc
     1381 cagagcggca gtcccacctc ctgctgccga tcattccggc caggagctag cgccgagtgc
     1441 gacatcctcc ttcgcccgca tcgggaaaag gagggtgagg gattggcccg ggcgcgaggt
     1501 ggaggggcca cgcgaatcat tgccccatct tcgcggggcc gtgaatgatg gggacggggt
     1561 gggaccatgg cggtgttccg atggagcgag atcc
//
LOCUS       DATIFF010001163         1616 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1377850, whole genome shotgun sequence.
ACCESSION   DATIFF010001163 DATIFF010000000
VERSION     DATIFF010001163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1377850"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            235..>1616
                     /locus_tag="VLD58_16955"
     CDS             235..>1616
                     /locus_tag="VLD58_16955"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSB56057.1"
                     /translation="MSEIQPIPFEAEAQRELERHWGVLVGKGEGLAALTAPGRVRHLV
                     QDSWRRSVGAMVRPDLGAAPVVFNEDDLNGATERSDWLEVADQAVARHQQSFGGIGHV
                     LTLFDNEARMLACEGDPAALEGLAEINFRPGGLWTETAVGTNGPGTALATGAPAHIVG
                     AEHFVERWQRWHCAAVPIRDPATTEIAGVLDISGFREYAHPHTLNLALALVVAIEQTL
                     AAREVERRYLTLQSFTDLTARYPGDSIIAVDRGGRVVGASPSVSPELAESLALLVRQS
                     RDGLASERATQIVVNARRTAMFFPVRQGKMVVGGCLVLEGGAPLYGSEGIPFHPGDVP
                     VYARRFFQAGARDLGRLGVNVDPQVYDALSAYHWPGNVRELRNVVRRVLLATTHQVRL
                     SDLPQFIREAYAGTADATSSAIDKEDAELMRVVRQSRTMAEAAARLGVTRSTLYRRME
                     RFGLKPKRVV"
BASE COUNT          255 a          502 c          605 g          254 t
ORIGIN      
        1 ctcttgccgc gaggcgacgt tggtcatggc aacctccaaa gggtcctggg tgggcggcgg
       61 tccggggaag ggccggagcg gcgccgggtg ggaaggctga cacgacggta ggaatggggc
      121 agaaagccgg caagcgtcgc gcgacaaatg tcccgccaat tgtgtcttgc cccgggcagt
      181 actccggaca acattgtgag aggtcccccg ctggttctcc ccggagtctg ttcaatgtct
      241 gagattcaac cgataccctt cgaggccgag gcccagcgcg agctggagcg gcattggggc
      301 gtgctggtgg ggaaggggga aggtctggcc gctctcaccg ctccggggcg ggtgcgccat
      361 ctggtccagg actcatggcg gcggagcgtg ggggcgatgg tccggcccga cctcggtgcc
      421 gccccggtgg tttttaatga agatgacctt aatggagcga cggagcggtc tgactggctc
      481 gaggtggccg accaggcggt ggccaggcac cagcagtcgt tcggcgggat cgggcatgtc
      541 ctgacgctgt tcgacaacga ggccaggatg ctcgcctgcg aaggcgatcc cgctgccctc
      601 gaaggcttgg ccgagatcaa cttccgcccg ggcggcctct ggaccgaaac ggcggtcgga
      661 accaatgggc cgggaacggc gctcgcgacc ggcgcgccgg cccatatcgt cggggccgag
      721 cacttcgtgg agcggtggca gcgctggcac tgcgccgcgg tgccgatccg cgatccggcg
      781 acgaccgaga tcgccggggt gctcgacatc agcggcttcc gggaatacgc ccatccccac
      841 acgctcaacc tggcgctggc gctggtggtc gcgatcgaac agaccctcgc ggcgcgcgag
      901 gtcgagcggc gctatctcac cctccagagt ttcaccgatc tcaccgcccg ctacccgggc
      961 gacagcatca tcgcggtcga ccgtgggggc agagtggtgg gcgcgtcacc ctcggtgagc
     1021 ccggagctgg ccgagtcgct ggcattgctg gtgcgccagt cgcgcgatgg actcgcgagt
     1081 gaacgtgcga ctcagatcgt ggtgaatgcg cggcggacgg cgatgttctt cccggtgcgg
     1141 cagggaaaga tggtggtggg cggatgcctg gtactcgaag ggggcgcgcc gctgtatggc
     1201 agcgaaggga ttcccttcca cccgggcgac gtgccggtct acgcccgccg tttcttccag
     1261 gccggcgccc gcgacctcgg gcggctcggg gtcaacgtcg atccgcaggt ctacgacgcc
     1321 ctctcggcct atcactggcc gggcaatgtg cgggagctca ggaacgtggt gcggcgggtg
     1381 ctgctcgcga ccacgcatca ggtgcggctc tccgacctgc cccagttcat tcgagaggcc
     1441 tacgccggca ccgcggacgc gaccagctcg gcaatcgaca aggaagatgc ggagctgatg
     1501 cgggtagtgc ggcagtcgcg cacgatggcg gaagcggcgg cgcggctcgg cgtaacccgg
     1561 agcacgctgt accggaggat ggagcggttc gggctcaagc caaagcgggt ggtgga
//
LOCUS       DATIFF010001164         1845 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1838773, whole genome shotgun sequence.
ACCESSION   DATIFF010001164 DATIFF010000000
VERSION     DATIFF010001164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1845
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1838773"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..476
                     /locus_tag="VLD58_16960"
     CDS             <1..476
                     /locus_tag="VLD58_16960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56058.1"
                     /translation="EFYSGNLHVASSKYLFVGLHGYHALVPWIWTAIVLNVLATVALM
                     IHPLRRNPHWLMPACAVLFVGIWVEKGIGLVIPGFIPSPLGEIVEYTPTWVELWVTAG
                     IWAMGLFVLTVLVRVALPIELGEVRSPYLEQPAARAVRPRATRTRYEEVRPVRKR"
     gene            529..1512
                     /locus_tag="VLD58_16965"
     CDS             529..1512
                     /locus_tag="VLD58_16965"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="slipin family protein"
                     /protein_id="HSB56059.1"
                     /translation="MTRNRPNDTRYSFAAIAAGLVGAAGLAGGLFLAGIAPPLAGLAG
                     VALGVLLAASIKYTDQWEKAVVLRLGRYRGLRGPGYFGIVPVFDRVAYTIDQRIRTAA
                     FGAESCLTRDTVPVNVDAIAFWIVRDAERAALEVQDYDEAVILSAQTALRDAIGKHDL
                     AELIQSRVELGQGLKVALEQKMANWGIHVQSVEIRDVIIPAALEDAMSRQAQAERERQ
                     ARIILGTAETEIAHKFVEAADAYRDHPAAMNLRAMNMLYESIVKRGSLMVVPSGLADS
                     LNVPSLMGVMGAVGHIPQDGSTEGSATAGADTARLATETRPSIAAAAPARQ"
BASE COUNT          290 a          606 c          637 g          312 t
ORIGIN      
        1 aagagtttta ctccggcaac ctgcacgtgg cttcgtcgaa ataccttttc gtcggcctgc
       61 acggctacca cgcactggtg ccatggatct ggacggcgat cgtgctcaat gtcctggcga
      121 cggtcgccct gatgatccac ccgctgcggc gcaacccgca ctggctgatg ccggcctgcg
      181 ccgtgctgtt cgtcggcatc tgggtcgaaa agggcatcgg cctggtgatt ccaggcttca
      241 ttccctcgcc tctcggagag atcgtcgagt atacgcccac ctgggtcgag ctctgggtga
      301 cggccggtat ctgggcgatg ggtctcttcg tcctgaccgt cctggtgcgg gtggcgctac
      361 cgatcgagct gggtgaggtg cggagcccgt atctggaaca gcccgccgcg cgggccgtcc
      421 gcccacgcgc cacccgcacg cggtacgagg aggtccggcc cgtgcggaaa cggtgatgcg
      481 accgctggta gaacgccggc tgactcaact ttcctcgagg tgatggacat gaccagaaac
      541 aggccaaatg acacccggta ttcgttcgcc gctatcgccg cgggtctggt gggtgcggcc
      601 gggctggcgg ggggattgtt cctcgcgggt attgctccac ctctggcggg gctggcgggc
      661 gtggcattgg gggtactgct cgccgcctcg atcaagtaca ccgaccagtg ggagaaggcg
      721 gtggtcctgc ggctcggccg ttatcgcggc ctgcgaggtc cggggtactt cggcatcgtg
      781 ccggtcttcg accgcgtggc ctacaccatc gaccaacgca tccggaccgc cgccttcggg
      841 gccgaatcgt gcctcacccg cgacaccgtg ccggtgaacg tcgacgctat cgccttctgg
      901 atcgtgcgcg acgcggagcg cgccgcgctg gaggtccagg actacgacga ggcggtcatt
      961 ctctcggcgc aaaccgcgct ccgggacgcg atcggcaagc acgacctcgc ggagctcatc
     1021 cagtcccggg tggagctcgg acaaggtctc aaagtggcgc tggagcagaa gatggcgaac
     1081 tgggggatcc acgtgcagtc ggtggagatc cgcgatgtga tcattcccgc cgcgctcgag
     1141 gacgccatgt cgcgtcaggc gcaggcggaa cgggaacgcc aggcgcgcat catcctcggc
     1201 acggcggaga ccgagatcgc ccataagttc gtcgaggccg ccgacgccta ccgcgaccac
     1261 ccggcggcca tgaacctgcg cgccatgaac atgctctacg agagcatcgt caagcggggc
     1321 tcgctcatgg tggtgccgtc ggggctggcg gattcgctca acgtcccgtc gctcatgggg
     1381 gtgatggggg ctgtcggaca cattccgcaa gacggctcga ccgagggctc cgcgactgcc
     1441 ggcgctgaca cggcccgcct ggcgaccgag acccggccga gcatcgctgc cgccgcgccc
     1501 gcgcggcagt agctacggcc ggcgcgcccg agtatcggtc ggggtgaccg gcccacccgg
     1561 tccggccgaa ccggggggct ccgcccgggg ccggggatgc acctacgccg gtgagggctg
     1621 actgcgtccg caacctgatt gccggcgcgc taaccggttg ccgtgggcgg gatggtggtg
     1681 agtgacgccg ccgtaagaac gaagattaac gcaggattaa gcgtcgcttc atgcatcagg
     1741 tccgagttct cgctacgttc gagcgcgccg ccgcgttacg aagcaatgac atcgccgtcc
     1801 cgccccgagt cggaggagtc gcgatgtacg ttcccaatcc catcc
//
LOCUS       DATIFF010001165         1204 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_762894, whole genome shotgun sequence.
ACCESSION   DATIFF010001165 DATIFF010000000
VERSION     DATIFF010001165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1204
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_762894"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..524)
                     /locus_tag="VLD58_16970"
     CDS             complement(<1..524)
                     /locus_tag="VLD58_16970"
                     /inference="COORDINATES: protein motif:HMM:NF014460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB56060.1"
                     /translation="MATSATLDIRRPIGRFVLGGLAHVGRMSLLIAEMVRGLSDWRVW
                     VPRSITEAANIGLGSLPIILLVAGFAGAVTALQTGYQFTGNIPYYVAGSLIVESVVLE
                     LGPVLTGLILAGRIGARYAAELGTMRVTEQIDALETLGRSPASHLVIPRVVAGILMIP
                     ILTIIANVTGVVSG"
     gene            686..>1204
                     /locus_tag="VLD58_16975"
     CDS             686..>1204
                     /locus_tag="VLD58_16975"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56061.1"
                     /translation="MPQPDGQTILAFRRRLARWFRRAGRDLPWRRTRDPYRVLVSEFM
                     LQQTQVSRVTEYYARFLERYPTVHDLAGAAPAQVREAWQGLGYYRRATNLHRLAQVVV
                     TEQDGIIPRDTEELRRLPGVGRYTAGAVSTFAFEAATPAIDTNVGRVIRRAFHPRGRG
                     SAGEKRIWATGAR"
BASE COUNT          215 a          414 c          399 g          176 t
ORIGIN      
        1 cagccggaca cgacgccggt gacattggcg atgatcgtca gaatcggaat catcaggatc
       61 ccggcgacga cccggggaat caccaggtgg ctcgcggggg agcgtccgag cgtctcgagg
      121 gcatcgatct gctcggtgac ccgcatggtg ccgagctcgg cggcgtagcg cgccccgatc
      181 cggcccgcga gaatgagccc ggtgagcacc ggccccagct cgagcaccac cgactcgacg
      241 atcaacgagc cggccacgta ataggggatg ttgccggtga actggtaccc ggtctggagg
      301 gccgtgacgg cccccgcaaa ccctgccacc agcaggatga tcggcaggct gccgagtccg
      361 atgttggcgg cttcggtgat acttctgggc acccacaccc gccagtcgga gagcccccgg
      421 accatctcgg cgatgagcag gctcatccgg ccgacatggg ccagaccgcc gagcacgaac
      481 cggccgatgg ggcggcggat atcgagggtg gcggaggtag ccattggccg ttagccgtta
      541 gccactagcc aacagccgag agtggccaag tatcgagatc gcatacgtgt ccttttctgg
      601 ttccagctaa cggccaacgg ctaatggcta acggcccacc catgtagctt actgcccaca
      661 gcccatcgac catagccccc gccccatgcc tcaacctgac ggccagacca tactcgcctt
      721 ccgccgccgg ctggcccggt ggttccgccg ggcgggacgg gacctcccct ggcgccgcac
      781 ccgggaccca taccgggtcc tggtctcgga gttcatgctg cagcagaccc aggtatcgcg
      841 ggtaaccgag tactacgccc ggtttctgga gcgctatccc acggtgcacg atctcgccgg
      901 ggccgcaccg gcacaagttc gagaagcctg gcagggattg ggctactacc ggagggccac
      961 caacctgcat cgcctggcgc aggtggtggt gaccgaacag gacgggatca tcccgcgcga
     1021 taccgaggaa ctgcgccggc ttcccggcgt gggccgctac accgcgggcg cggtctcgac
     1081 cttcgccttc gaggccgcca ccccggccat cgacaccaac gtcggtcggg tcatccgccg
     1141 agccttccat ccgcgggggc gtgggtcggc aggggaaaag aggatctggg cgaccggagc
     1201 gcgg
//
LOCUS       DATIFF010001166         1385 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1071782, whole genome shotgun sequence.
ACCESSION   DATIFF010001166 DATIFF010000000
VERSION     DATIFF010001166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1385)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1385)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1385
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1071782"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..496)
                     /locus_tag="VLD58_16980"
     CDS             complement(<1..496)
                     /locus_tag="VLD58_16980"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB56062.1"
                     /translation="MAFPPQSPTPTFPYQVEARIGEGAMGIVYRALEPSLERRVAIKS
                     LHARMLAGEEPETAREYRLRFLQEARAAAALSHPGAATIYRIGEEEGTPYIAMEWLEG
                     KTLERLIQDEGKLPPERAVHLMVDLLGTLDAAHRNGVVHRDIKPANLMLLPDGRLKVT
                     DFGIA"
     gene            complement(591..809)
                     /locus_tag="VLD58_16985"
     CDS             complement(591..809)
                     /locus_tag="VLD58_16985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56063.1"
                     /translation="MRKLVMLSLLVLGASVTGLFSPRPAAAAPPGGTCVTYCSTNACG
                     YTCCYEQCCGSRCIALDCAPPPPCGGDN"
     gene            complement(891..>1385)
                     /locus_tag="VLD58_16990"
     CDS             complement(891..>1385)
                     /locus_tag="VLD58_16990"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="vanadium-dependent haloperoxidase"
                     /protein_id="HSB56064.1"
                     /translation="SEALKRTHTKFGSYLLPMAFPEGSPTHPAYGAGHATVAGACVTI
                     LKAWFDEDAPLPVKPQVPNADGTALVDYTGPDAGSLTVGGELNKVAANIAIARNMAGV
                     HWRSDYQQSIYLGERVALHILKRQRHDYHEKDWSFTLRRFDGTKVTISRSGIFDEAGH
                     SVDL"
BASE COUNT          203 a          440 c          514 g          228 t
ORIGIN      
        1 gggcgatgcc gaagtcggtc accttcagcc ggccgtccgg gagcagcatg aggttggcgg
       61 gcttgatgtc ccggtgcacg acgccgttgc ggtgggcggc gtcgagcgtg cccagcaggt
      121 cgaccatcag gtggaccgcc cgttccggcg gcagcttccc ctcgtcctgg atcagccgct
      181 ccagcgtctt cccctccagc cactccatgg cgatgtaggg ggtgccctcc tcctcgccga
      241 tgcggtagat cgtcgccgcg ccggggtggg agagcgccgc cgccgcccgc gcctcctgca
      301 ggaagcggag gcggtattcg cgggcggtct ccggctcctc gccggccagc atccgggcgt
      361 gcagcgactt gatcgccacc cgccgctcca gcgacggctc gagagcgcgg tagacgatgc
      421 ccatcgcgcc ttcgccgatg cgggcctcga cctgataggg gaaggtcgga gtggggcttt
      481 gcgggggaaa ggccatgctt gctcccaagg atggcggccc cccggagagg gggccgcgct
      541 ttcatctacg acacttgaga tgcttttggt ttgccggagg tttcaccggc tcagttgtcg
      601 ccgccgcagg ggggaggcgg cgcgcagtcg agggcgatgc accgggagcc gcagcactgc
      661 tcgtagcagc aggtgtagcc gcaggcattg gtggagcagt aggtgacgca ggtgccgccc
      721 ggaggggccg ccgcggccgg acggggggag aagagaccgg taacggaagc acccaggacc
      781 agcagggaca acatcacgag cttgcgcatg ttcagacctc cagagagtgt tggcgggaga
      841 ttatagcttc ccgggaatgg aaacgctccg gagcgacgaa tcccctctcc ttacaggtcc
      901 accgaatggc cggcctcgtc gaagatcccg ctgcggctga tggtcacctt ggtgccgtcg
      961 aaccggcgga gggtgaacga ccagtccttc tcgtggtagt cgtgacgctg cctcttgagg
     1021 atgtggaggg cgacccgctc gccgaggtag atcgactgct ggtagtcgct gcgccagtgg
     1081 acccccgcca tgttgcgggc gatggcgatg ttggcggcca ccttgttgag ctcgccgccg
     1141 acggtgaggc tgccggcgtc cgggccggtg tagtccacca gggcggtgcc gtcggcgttc
     1201 ggcacctgcg gcttgacggg gagcggcgcg tcctcgtcga accaggcctt gaggatggtc
     1261 acgcaggccc cggccaccgt ggcgtgcccg gcgccatagg ccggatgggt ggggctcccc
     1321 tccgggaagg ccatcggcag caggtaggag ccgaatttcg tgtgcgtccg cttcagggcc
     1381 tcgga
//
LOCUS       DATIFF010001167         1529 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_303230, whole genome shotgun sequence.
ACCESSION   DATIFF010001167 DATIFF010000000
VERSION     DATIFF010001167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_303230"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(138..222)
                     /locus_tag="VLD58_16995"
     tRNA            complement(138..222)
                     /locus_tag="VLD58_16995"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(186..188),aa:Ser,seq:cga)
     gene            complement(244..708)
                     /gene="tadA"
                     /locus_tag="VLD58_17000"
     CDS             complement(244..708)
                     /gene="tadA"
                     /locus_tag="VLD58_17000"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HSB56065.1"
                     /translation="MIPEQAADDTRFMDMALDEADRAAAAGEVPVGAVIVLDGRVIAR
                     GHNAPIAQRDPTAHAEITALRAAARELGNYRLPGVTLYSTVEPCAMCCGAVVHARVAR
                     LVYGAADPKAGAAGSLYNFAADPRLNHTTEVVGGVRAAECAALLTDFFARRR"
     gene            complement(767..843)
                     /locus_tag="VLD58_17005"
     tRNA            complement(767..843)
                     /locus_tag="VLD58_17005"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(807..809),aa:Arg,seq:acg)
     gene            complement(847..940)
                     /locus_tag="VLD58_17010"
     tRNA            complement(847..940)
                     /locus_tag="VLD58_17010"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(903..905),aa:Ser,seq:gct)
     gene            1036..>1529
                     /locus_tag="VLD58_17015"
     CDS             1036..>1529
                     /locus_tag="VLD58_17015"
                     /inference="COORDINATES: protein motif:HMM:NF018210.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:1904680 - peptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SbmA/BacA-like family transporter"
                     /protein_id="HSB56066.1"
                     /translation="MARLREMLHEAWILTRPYWFSEDRWAGRGLLAVVVGINLAIVYI
                     NVLLNQWNNTFYNALQDKDLAVFWSQLLRFTWLAALFIVAAVYQTYLNQMLQIRWRRW
                     LTDRYLRAWLADGSYYRMQLTAGDTDNPDQRIAEDLRLFVGGTLTLAIGGMRAVVTLL
                     SFLG"
BASE COUNT          232 a          534 c          510 g          253 t
ORIGIN      
        1 ggcgtttacg gctcgtgcac ccgcgggagt gaccgcgagc gcgacgaacg cgacgcacaa
       61 gagtgctccg acggcgaggg aaaccccgat cgaccgcgtc gaattcggcg taaccgttga
      121 tgatttggtt tccagagcgg agggagtggg atttgaaccc acggtgactt gcgccacaat
      181 ggttttcgag accatccgat tcggccgctc tcgcatccct ccgggtggga tgttatgtga
      241 cggctaccgg cgcctcgcga agaagtcggt gagcagcgcc gcgcactccg cggcgcgcac
      301 accccccacg acctctgtcg tgtggttgag ccgcgggtcg gccgcgaagt tgtagagact
      361 cccggccgcg cccgccttgg ggtcggcggc gccatagacg aggcgggcga cccgggcgtg
      421 gaccaccgcc ccgcagcaca tcgcgcacgg ctcgaccgtg ctgtagaggg tgacgccggg
      481 gaggcggtag ttgccgagct cccgcgcggc cgcgcgcaga gccgtgatct cggcgtgggc
      541 ggtcgggtct cgctgggcga tcggtgcgtt gtgcccgcgg gcgatcacgc ggccgtcgag
      601 cacgatcacc gccccgaccg gcacctcgcc cgcggccgcg gcccggtcgg cctcgtcgag
      661 ggccatatcc atgaagcggg tgtcgtcggc tgcctgctcc gggatcatcg gcagtggcgc
      721 acagccgcag ggcccgtccg ggcgccccgc ggcctatgcg tcgaaatggt gcgccctaga
      781 ggaatcgaac ctctggcctt cggattcgta gtccgacgct ctatccatct gagctaaggg
      841 cgctcttggc ggagaggccg ggattcgaac ccgggacaga ggttttgccc ctgtaaccgc
      901 ttagcaggcg gctgccttcg gccgactcgg ccacctctcc aaacgtcaag ccctccgagt
      961 ataagccatc gcgtctcccc cgactaccgg gaagctggcg ctccggccta tgcttgggag
     1021 ccgaggagac cctacatggc gcgcctgcgc gagatgctgc acgaagcctg gatcctgacc
     1081 cggccctact ggttctcgga ggaccgctgg gcgggccggg gcctcctggc cgtggtggtc
     1141 gggatcaacc tggccatcgt ctacatcaac gtcctgctga accagtggaa caacaccttc
     1201 tacaacgccc tgcaggacaa ggacctcgcg gtgttctgga gccagctgct gcggttcacc
     1261 tggctcgccg ccctcttcat cgtggccgcg gtctaccaga cctacctcaa ccagatgctc
     1321 cagatccgct ggcgccgctg gctcaccgac cgctacctgc gcgcctggct ggccgacggc
     1381 tcctactacc gcatgcagct caccgccggg gacaccgaca accccgacca gcgcatcgcg
     1441 gaggacctgc ggctcttcgt cgggggcacg ctcaccctcg cgatcggcgg catgcgggcg
     1501 gtggtcacgc tgctgtcctt cctgggcat
//
LOCUS       DATIFF010001168         1607 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_610322, whole genome shotgun sequence.
ACCESSION   DATIFF010001168 DATIFF010000000
VERSION     DATIFF010001168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_610322"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..292)
                     /locus_tag="VLD58_17020"
     CDS             complement(<1..292)
                     /locus_tag="VLD58_17020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56067.1"
                     /translation="MHVDFAVLADYALIDQHGKLSVLGIFQHVWVAGFPAVHPRTHLV
                     LRVRGRRTEVGEHPIRIRFLDDQGNELMGGEGTVNFGEPPAGITEIEAGAVLV"
     gene            complement(295..741)
                     /locus_tag="VLD58_17025"
     CDS             complement(295..741)
                     /locus_tag="VLD58_17025"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSB56068.1"
                     /translation="MKKAVIDTARGTITAELFDTEVPGTVANFEKLANEKFYDGTRFH
                     RVIANFMIQGGDPLSKNPSDPRVGTGGPGYKIKCETHLNTHKHLEGTLSMAHAGKDTG
                     GSQFFICHAPQPHLDRKHTVFGQVLEGLDVVHQIRQNDVINSIRVA"
     gene            849..1499
                     /locus_tag="VLD58_17030"
     CDS             849..1499
                     /locus_tag="VLD58_17030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56069.1"
                     /translation="MDELEPLRHDAIRALSEAVAADRLPVSQFETRLALVRQAPNRAS
                     LEAIVADILPTGVYAGAGEPRALAPYAPDDFALAPAEVLRLATFMGSRKRAGSWTVPL
                     RLELRVVMGEIMLDMRDAYFGAELVEIDVHILMGGVKLVIPAGAQVENECMERMSSSS
                     HSTRHAKGAAPINLLFRITGRVTMGSLDVQERWPSADEPDRRPKWMRRLLGGAGGD"
BASE COUNT          242 a          550 c          558 g          257 t
ORIGIN      
        1 agaccagcac cgcccccgcc tcgatctcgg tgatgccggc cgggggctcg ccgaagttga
       61 ccgtcccctc cccgcccatc agctcattgc cctggtcgtc gaggaaacgg atccggatgg
      121 ggtgctcgcc cacttcggtc cggcggcccc gcacccggag cacgaggtgg gtccggggat
      181 gcaccgcggg aaagcccgcc acccacacgt gctggaagat cccgagcacg gagagcttcc
      241 cgtgctggtc gatcagcgcg tagtcggcga gcaccgcaaa atccacgtgc acgttcaggc
      301 cacgcggatc gagttgatca cgtcgttctg gcggatctgg tgcaccacgt cgaggccctc
      361 gaggacctgg ccgaagaccg tgtgcttgcg gtcgaggtgg ggctgggggg cgtggcagat
      421 gaagaactgg ctccccccgg tgtccttccc cgcatgggcc atcgagagcg tgccttcgag
      481 gtgcttgtgg gtgttgagat gggtttcgca cttgatcttg tagccgggcc cgccggtccc
      541 caccctcggg tcggacggat tcttcgagag cgggtccccg ccctggatca tgaaattcgc
      601 gatcacccgg tggaagcggg tgccgtcgta gaatttctcg ttggcgagct tctcgaagtt
      661 cgccacggtg ccggggactt cggtgtcgaa gagctccgcg gtgatggtgc cgcgcgcggt
      721 gtcgatgacg gccttcttca tgggtcgttc ggatccgggt tgggggaggc gagcgcccca
      781 agtctaacgg aaccgacccg gcggagcgag cgattggcga actcccccgg catcgataca
      841 ataccgtcat ggacgagctc gagccgctcc gccacgacgc catccgcgcg ctctccgagg
      901 cggtcgcggc cgaccggctc ccggtcagcc agttcgagac ccgcctcgcc ctcgttcgtc
      961 aggcacccaa ccgcgcgagc ctggaggcga tcgttgccga catcctcccc accggggtct
     1021 atgccggcgc cggggaaccg cgcgcgctcg ccccgtatgc gcccgacgat tttgccctcg
     1081 cccccgccga ggtgctccgg ctcgccacct tcatgggctc gcgcaagcgc gccggctcct
     1141 ggacggtgcc gctccggctg gagctcaggg tggtgatggg cgagatcatg ctcgacatgc
     1201 gggacgccta cttcggcgcg gagcttgtgg aaatcgacgt ccacatcctg atgggaggcg
     1261 tcaagctcgt catccccgcc ggcgcccagg tcgagaatga atgcatggag cggatgagca
     1321 gttcgagcca ttccacccgc cacgccaagg gcgccgcgcc catcaacctg ctcttccgga
     1381 tcactggccg ggtgacgatg ggaagcctcg atgtgcagga acgctggccg agcgcggacg
     1441 agccggaccg ccggccgaag tggatgcgcc gcctgctggg cggcgccggg ggcgactagg
     1501 acgccgtgcg ccgggacccc tttgcgggcg gcggctcggc acgccgcacc gagggacaga
     1561 gccgggccag aacgcactcc ccgcaccggg gtcggcgcgc gatgcag
//
LOCUS       DATIFF010001169         1722 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_304293, whole genome shotgun sequence.
ACCESSION   DATIFF010001169 DATIFF010000000
VERSION     DATIFF010001169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1722
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_304293"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1239)
                     /locus_tag="VLD58_17035"
     CDS             complement(<1..1239)
                     /locus_tag="VLD58_17035"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSB56070.1"
                     /translation="MTPAVSRPRLSRDPPVQLGLAANWRQFSLLVLLNAFVGAMVGLE
                     RTVLPLVAEREFGIASVSAALSFIAVFGVVKAATNFMAGRLSDRWGRKRVLVLGWLFA
                     LPVPLLIIWAPAWSWVVVANALLGVNQGLAWSTTVIMKIDLVGPARRGLAMGLNEFAG
                     YLAVAGTALGSGLLADRYGLRPVPFYLGLGIAAVGLALSLLLVRDTAAHAALESAPRR
                     PGSGLKTATDTPSLRRLVAMGTWRDPALGTASQVGLINNLNDGLAWGLFPLFFAAAGL
                     DLAQIGILGFIYPAVWGVLQLGTGPLSDRWGRKWLIAGGMLLQGGALAAIALVHGFGP
                     WLSAAALLGAGTAMVYPTLLAVVGDVAQPQLRGSALGVYRLWRDSGYAVGALFAGVVA
                     DAFGTGWSIGAVALLTFASGL"
     gene            complement(1236..>1722)
                     /locus_tag="VLD58_17040"
     CDS             complement(1236..>1722)
                     /locus_tag="VLD58_17040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56071.1"
                     /translation="DGSILELGNVLLQIWHTPGHTPEHLTILATDRTRGPEPWLAFTG
                     HTLMVGDMGRTELASSAEQGASSLFESAERLRTLRDDLLVMPGAFSGSVCGRGLSGTP
                     MSSIGFERRFNKAFRVTDRAAFVALMVRDVPPRPPGAAEIRARNLGQPVPAGAAVNLQ
                     R"
BASE COUNT          312 a          591 c          600 g          219 t
ORIGIN      
        1 cagacccgag gcgaacgtga ggagcgccac tgcgccgatg gaccatcccg tgccgaaggc
       61 atcggccacg accccggcga agagcgcccc cacggcatag ccgctgtccc gccagagtcg
      121 atagacgccc agggccgacc cacgcaattg cggttgtgcg acatcgccca cgacggccag
      181 gagagtgggg tagaccatcg cggtgcccgc accgagaagc gcggcagcgc tcagccatgg
      241 cccaaagccg tggacgagcg cgattgccgc caaggccccg ccttgcagga gcatgccgcc
      301 agcgatgagc catttccgcc cccagcggtc ggagagggga ccggtcccga gctgcagcac
      361 gccccacacc gccggataga tgaagccgag gatgccgatc tgggccaagt cgaggccggc
      421 cgcggcgaag aagagtggga agagccccca ggccaggccg tcgttcaggt tgttgatgag
      481 gccaacctgg cttgcggtcc cgagcgccgg gtcgcgccag gtacccatgg cgaccagtct
      541 gcggagcgag ggggtgtcgg tcgccgtctt cagcccgctg ccgggtcgtc gcggggcact
      601 ctccagcgcg gcatgcgcag ccgtgtctcg gaccaggagc agcgagagcg ccaggccgac
      661 tgccgcgatg ccaagtccca ggtagaaggg caccggccgc agtccatacc ggtctgccag
      721 gaggcccgaa ccgagcgcgg tcccggcaac cgcgagatag ccggcgaact cgttcaggcc
      781 catcgcgagc cctcttcggg caggcccgac cagatcgatc ttcatgatga cggtagtgga
      841 ccacgccagt ccctggttca cgcccagcag cgcgttcgct accacgaccc agctccaggc
      901 aggcgcccaa atgatgagca gcggcacggg cagggcgaag agccagccga ggacgaggac
      961 ccgcttgcgc ccccagcggt cactcagccg ccccgccatg aagttcgtag cggcctttac
     1021 gaccccgaac acggcaatga aactgagtgc cgcgctcacc gaggcgatcc cgaactcccg
     1081 ctccgctacg agcggcagca cggttcgctc cagtccgacc atggcgccga cgaaggcgtt
     1141 gagcaggacg aggagtgaga actgtcgcca gttggcagcg aggccgagct gaaccggggg
     1201 atcccgcgac aggcgagggc gagagactgc cggggtcacc gctgtaggtt gacggccgcg
     1261 cctgccggca cgggttggcc gaggttccgg gcccggatct cggcagctcc aggcgggcgc
     1321 ggcggcacgt cgcgtaccat gagcgccacg aaggccgccc gatcggtgac tcgaaatgcc
     1381 ttgttgaacc gacgctcgaa cccgatcgag gacatcggcg tgccgctcag gccacgcccg
     1441 cagaccgagc cgctgaaggc gccgggcatc actaggagat catcccgaag cgtgcggagc
     1501 cgttccgcgc tttcgaagag cgagctcgcg ccctgctcgg cactggaagc caattccgtg
     1561 cggcccatgt caccgaccat gagcgtgtgg cccgtgaatg cgagccaggg ctcgggtccg
     1621 cgggtccggt ccgtcgcgag gatggtgagg tgctcgggcg tgtggcccgg cgtgtgccag
     1681 atctggagca acacgttgcc gagctcgagg atgctgccgt cc
//
LOCUS       DATIFF010001170         2733 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_149579, whole genome shotgun sequence.
ACCESSION   DATIFF010001170 DATIFF010000000
VERSION     DATIFF010001170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2733
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149579"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..537)
                     /locus_tag="VLD58_17045"
     CDS             complement(<1..537)
                     /locus_tag="VLD58_17045"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSB56072.1"
                     /translation="MPRDLIALAGVDHDLLVIGGGIQGATIAWDAALRGLRVALVERD
                     QFGAATSANSLRIVHGGLRYLSRGDLPRMRESIRERSTLLRIAPGLVEPLGVAIPTGA
                     PGYPGRTAMALALRLNDLVSAGRNRHLLSSSHIPPGRLVSPAELAELCPPLRQIGSRG
                     GALWHDARMSHPERLIYAF"
     gene            complement(566..1555)
                     /locus_tag="VLD58_17050"
     CDS             complement(566..1555)
                     /locus_tag="VLD58_17050"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HSB56073.1"
                     /translation="MVAQGTLMEPTAESTRRARTTDGRFVSVIVPVIERVDDLTVLYQ
                     TFGAALTARGNEHEFIFVFDGGYAPSPELVALSQERPNLRLLRFARTFGETAALRLGI
                     ERSQGDILLTLPAYFQVQPEGVGTLLDAMTDQTDVVVANRSPRYDSWLNRLQSVAFNR
                     MISGVSNQRFHDSACGVRVIRRSAAEGLPLYGDLHRFIPAMALREGFQVVEVAVPQHP
                     SNVRTRVYGPGVYARRLLDIAAFFFLAKFTEKPLRFFGLVGSVFFASGAITSLVLLVN
                     RLEGQAIANRPLLLLAVLCLALGVQLMGLGLVGEIIVHLRAPHRRAYRVRERV"
     gene            complement(1557..2528)
                     /locus_tag="VLD58_17055"
     CDS             complement(1557..2528)
                     /locus_tag="VLD58_17055"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSB56074.1"
                     /translation="MVLTQSAERLATPELSVVAPLYNESQNVAPLVEWILEALSGYAG
                     RFEVILVDDGSRDDTWSRVVAASLLDRRVHGLRLGRNVGQTAAMMAGFDHARGRVVVS
                     LDGDLQNDPRDIPALVAKLDEGYDLVCGWRQRRQDKFLLRKVPSWVANRIIRRLTGVQ
                     ITDNGCSLKAYRRELLDRVSLYAEQHRFIPALSANAGARITEMPVRHHARRFGESKYG
                     ISRTVKVLADLFTLKMITTFRSRPLLGFGAAAVPLIVSALLFTAASVVAATQFRESKA
                     TAVVFPGAAMLFAAAAFYLVMLGLVAEVALSSERESANEIPTAWEVG"
BASE COUNT          469 a          921 c          965 g          378 t
ORIGIN      
        1 aaaggcgtag atcaggcgtt cgggatggga catccgggca tcgtgccaca gggcaccgcc
       61 ccggctgccg atctggcgca gcggggggca gagctccgcc agctcagccg gcgacacgag
      121 gcggcctggg gggatgtggc tggaggagag gaggtgccgg ttgcgtccgg ccgataccag
      181 atcgttgagg cggagggcca gcgccatggc tgtgcggccg gggtagcccg gggcgccggt
      241 ggggatcgcc actccgagcg gctcgaccag gcccggggcg atgcggagga gggtggagcg
      301 ctcccggatc gactcgcgca ttcgcgggag atcgccccgc gagagatagc ggagaccccc
      361 gtgaacgatc cgcaggctgt tggcggacgt ggccgcgccg aactggtccc gctcgaccag
      421 cgccacccgc aggccgcgaa gggccgcgtc ccacgcgatg gtcgccccct ggattccgcc
      481 gccgatcacc agcagatcgt gatccacccc ggcgagcgcg atcaggtcgc ggggcacccc
      541 ggcagggtcg ggggtcagcg gcgggtcaca cccgctcccg cacccggtag gcccgacggt
      601 gcggcgcccg caggtggacg atgatctccc cgaccaggcc cagccccatg agctggaccc
      661 cgagggccag acagagcacc gcgaggagga gcagcgggcg gttggcgatg gcctgaccct
      721 cgagccggtt gaccagcagg accagcgagg tgatggcccc cgaggcgaag aacaccgagc
      781 cgaccagccc gaagaagcga agcggcttct cggtgaactt ggcgaggaag aagaacgccg
      841 cgatatccag cagtctgcgg gcgtatacgc cggggccgta gactcgggtg cggacgttgc
      901 tcgggtgctg gggcaccgca acttccacca cctgaaagcc ctcccgaagg gccatggcgg
      961 gaatgaagcg gtggaggtcg ccgtagagcg ggagcccctc ggcggcggag cgccggatca
     1021 cccggacgcc gcaggcgctg tcgtggaacc gctgattgct cacccccgag atcatccggt
     1081 tgaacgccac cgactgtagc cgattgagcc agctgtcgta ccggggggag cggttggcca
     1141 cgaccacgtc ggtctggtcg gtcatcgcat cgagcagggt accgaccccc tccggctgca
     1201 cctggaaata ggccgggagg gtgagcagga tgtcaccctg gctgcgctcg atgcccaggc
     1261 gcagggcggc ggtctcaccg aaggtacggg cgaaccggag caggcgcaga ttgggccgct
     1321 cctggctcag tgcaaccagc tcgggagacg gagcgtaccc gccgtcgaac acgaagatga
     1381 actcgtgctc gttgccccgg gcggtgagcg cggcgccgaa ggtctggtac agcacggtga
     1441 gatcgtcgac ccgctcgatc accggcacga tgaccgagac gaaccgtccg tcggtggtcc
     1501 gggcacggcg ggtggattcg gcggtcggct ccatcagggt cccctgtgcc accatgttaa
     1561 ccaacctccc aggcagtcgg aatctcgttc gcgctctccc gctcgctgct cagtgccacc
     1621 tccgccacca gccccagcat caccaggtaa aacgcggcgg cggcgaacag catcgcggcg
     1681 ccggggaaga ccacggccgt cgccttgctt tcccggaact gcgttgcggc caccacggac
     1741 gccgcggtga acagcaacgc cgacacgatg agggggaccg cggccgcgcc gaacccgagc
     1801 agcgggcgcg accggaaggt cgtgatcatc ttcagggtga acaggtcggc cagcaccttc
     1861 accgttcggg aaatcccgta cttgctctcg ccgaagcgcc gggcgtgatg gcgcaccggc
     1921 atctcggtga tccttgctcc ggcgttggcc gacagcgccg ggatgaagcg gtgctgctcc
     1981 gcgtagagcg acacccggtc caacaactcg cggcgatagg ccttgagcga gcaaccgttg
     2041 tcggtgatct ggaccccggt gaggcgccgg atgatccggt tggccaccca ggacggcacc
     2101 ttgcgcagca ggaacttgtc ctgccgccgc tgccgccagc cgcacaccag gtcgtacccc
     2161 tcgtccagct tggcgaccag ggccgggatg tcgcgcggat cgttctgcag atctccgtcc
     2221 agcgaaacca ctacccgccc cctggcatgg tcgaagcccg ccatcatggc cgcggtctgg
     2281 cccacgttcc gtcccagtcg gagcccgtgc acccgccggt cgaggaggga cgcggccacc
     2341 acccggctcc aggtgtcgtc gcggctgccg tcgtccacca ggatcacttc gaaacggccg
     2401 gcatacccgg acagggcctc gagaatccac tccaccagtg gcgcgacgtt ctgcgactcg
     2461 ttgtacagcg gtgccaccac cgaaagctcg ggggtggcga gacgctccgc cgattgggtc
     2521 agaaccatgg agccatcgct ttgcaccagt tcagggtaag gtaccgggcg gcccgccgcc
     2581 gtaccagcaa tcaccattcc gcgggtggga agacctgagt ccacccctca agtacttgtg
     2641 cagtcggtct ttgaggcact tggtagggcg gcagtgaacg gggggagtca tggcggatcg
     2701 cgcggctgtg gtgcttgcgc aacggcacag ccg
//
LOCUS       DATIFF010001171         2681 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1228028, whole genome shotgun sequence.
ACCESSION   DATIFF010001171 DATIFF010000000
VERSION     DATIFF010001171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2681
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1228028"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1189)
                     /locus_tag="VLD58_17060"
     CDS             complement(<1..1189)
                     /locus_tag="VLD58_17060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56075.1"
                     /translation="MPTDPKASLPAWFLGPRGENAELLERLVVEALRDHVFWRRNYHP
                     EDGVGIREIDKRREGYEAAVATLTQELMGLLAQLKRDVPFFSGRYKGHMIAEQTIAAQ
                     IGYFATMLYNPNNIGAEISPVTSRLELEVAAQLARMIGYDADRAWGHLTSGGTIANFE
                     AVWLARGVRYLPLAASGAATELGLELEVRLPAGDIAPLAELPLWTLLNITNEATLDLW
                     DLLWRSAPRADVRRALANHSLADIGYQEYSRRLALDYGDPLPAGVVLVAATAHYSWEK
                     IVRALGIGSNQLVYVPLDTCYRMDPDALWEQVRELARHRQPVQALVSVCGTTEESAVD
                     RLDLVLDVRRRAEQELGVTFHVHSDACYGGYAAAVTRRADGARRTAVEIRASVGADWP
                     SPEW"
     gene            complement(1286..>2681)
                     /locus_tag="VLD58_17065"
     CDS             complement(1286..>2681)
                     /locus_tag="VLD58_17065"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HSB56076.1"
                     /translation="AYWHSRTSIEPQFSLVSGLALEERSDIFHFEGQNNWNFNHDRGR
                     VVYGASVRNTQVNTSGTLMNLANDDRSDNLYSAYGQLEYRITPMVRLVGAARFDDGDL
                     FDGQFSPKGAVVFSPNENHSFRFSVNRAFQTPNYSEYFLQVPVAPATAAPATLEGGIE
                     QYYAAVRANIPPQFLADLTITDNLPWNFSPATQALALGNANLDVEKVTGWEVGYKGSV
                     GNFYFTADGYINRLRDFVTDLLPGVNPAYPTYAITDEVNVPAELVALDARLASLGLPP
                     NHPLRAPIPLLLGGHAQLQAGTRIQGANALATLPDGSRAIVLSYTNAGKVTERGIEIG
                     VGYQFTPEVRGDVSFTGFGFTVDKTSTAAGDQLLPNTPSKKATFSLSYAGEQGFDGNV
                     TVRLVDGYPWAAGIFQGYVPSAELVNVSAGYRINNYVRIQATATNLFNQERYQLFGGS
                     VIGRRVLGGITANF"
BASE COUNT          388 a          877 c          989 g          427 t
ORIGIN      
        1 cccactcagg gctcggccag tcggccccga ccgacgcccg gatctccacc gcggtccggc
       61 gggccccgtc ggcccggcgg gttaccgccg ccgcgtagcc gccatagcag gcgtcggagt
      121 ggacgtggaa ggtcacgccc agctcctgct cggcccgccg gcggacgtcg agcaccaggt
      181 cgagccggtc caccgcgctc tcctcggtgg tgccgcacac gctcaccagc gcctgcaccg
      241 gctggcggtg ccgggccagc tcgcgcacct gctcccacag cgcgtccggg tccatccggt
      301 agcaggtgtc gagcggcacg tagaccagct ggttggagcc gatgccgagg gcgcggacga
      361 tcttctccca ggagtagtgc gcggtggcgg cgaccaggac cacgccggcg gggagcgggt
      421 cgccgtagtc cagcgccagg cgacggctgt actcctggta gccgatgtcg gcgagcgaat
      481 ggttggccag ggcccggcgg acgtcggccc ggggggccga gcgccagagc aggtcccaga
      541 gatcgagggt ggcctcgttg gtgatgttga gcagggtcca gaggggaagc tcggccagcg
      601 gggcgatgtc tccggccggc agccggacct cgagctcgag gccgagctcg gtggcggcgc
      661 cggaggcggc gagggggagg taccgcaccc cgcgcgccag ccacaccgcc tcgaagttgg
      721 cgatggtgcc gcccgaggtg aggtggcccc atgcccggtc ggcgtcgtac ccgatcatcc
      781 gggcgagctg ggccgccacc tccagctcca gccggctggt gaccggcgag atctccgccc
      841 cgatgttgtt ggggttgtac agcatggtgg cgaagtagcc gatctgcgcc gcgatagtct
      901 gctccgcgat catgtggccc ttgtagcggc cgctgaagaa cgggacgtcg cgcttgagct
      961 gggcgaggag gcccatcagc tcctgggtca gtgtggcgac cgccgcctcg tagccttccc
     1021 ggcgcttgtc gatctcgcgg atgcccaccc cgtcctccgg gtgatagttc cgccgccaga
     1081 agacgtggtc ccggagcgcc tcgacgacca gccgctcgag tagctcggcg ttctcccccc
     1141 gggggccgag gaaccaggcg gggagcgatg ccttggggtc ggtgggcatg agcgagacgg
     1201 aaaggggaaa ggggaaaggg gaggggggcg cgcgacggga tctcttcgag cgttcccttc
     1261 ccctttctcc tttccccctt cgctcctaga agttcgccgt gatgccgccc agcacccgcc
     1321 gcccgatcac cgatccgccg aagagctggt agcgctcctg gttgaacagg ttcgtcgcgg
     1381 tggcctggat ccggacgtag ttgttgatcc ggtacccggc gctcacgttc accagctcgg
     1441 ccgaggggac atagccctgg aagatgccgg ccgcccaggg atagccgtcc accagccgga
     1501 ccgtgacgtt gccgtcgaag ccctgctccc cggcgtacga gagcgagaat gtcgccttct
     1561 tgctcggcgt gttgggcagc agctggtcgc cggccgcggt gctcgtctta tccaccgtga
     1621 agccgaaccc ggtgaacgac acgtcgcccc gcacctcggg ggtgaactgg tagcccacgc
     1681 cgatctcgat gccccgctcg gtcaccttgc cggcgttggt gtaggagagc acgatcgccc
     1741 ggctgccgtc gggcagggtg gcgagcgcgt tcgcgccctg gatccgggtc ccggcctgga
     1801 gctgggcgtg gccaccgagc agcaggggga tcggggcccg gagcggatgg ttgggcggca
     1861 gtcccaggct cgcgagccgg gcatcgagcg ccaccagctc ggccgggacg ttgacctcgt
     1921 cggtgatggc gtacgtgggg tacgccgggt tgacccccgg caggaggtcg gtgacgaagt
     1981 cgcggagccg gttgatgtag ccgtcggcgg tgaagtagaa gttgccgacg ctccccttgt
     2041 accccacctc ccagccggtc accttctcga cgtcgaggtt ggcgttgccc agcgcgagcg
     2101 cctgggtggc cggagagaag ttccagggga ggttgtcggt gatggtgagg tcggccagga
     2161 actggggcgg gatgttggcc cggacggcgg cgtagtactg ctcgatccca ccctccagcg
     2221 tggccggagc ggcggttgcc ggcgccaccg gcacctggag gaagtactcg gaatagttcg
     2281 gggtctggaa ggcgcggttg accgagaacc ggaacgagtg gttctcgttc gggctgaaca
     2341 cgaccgcgcc cttgggcgag aactggccgt cgaacaggtc gccgtcgtcg aaccgggcgg
     2401 cgccgaccag ccgcaccatc ggggtgatcc ggtattccag ctggccgtac gccgagtaga
     2461 ggttgtcgct ccggtcgtcg ttggccaggt tcatcagggt gccgctggtg ttcacctggg
     2521 tgttgcgcac cgaggcgccg tacaccaccc ggccacgatc gtggttgaag ttccagttgt
     2581 tctggccttc gaagtggaag atgtcggagc gctcctccag agcgagtccc gacaccaagg
     2641 agaactgcgg ctcgatcgac gtccggctgt gccagtaggc a
//
LOCUS       DATIFF010001172         2687 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_456341, whole genome shotgun sequence.
ACCESSION   DATIFF010001172 DATIFF010000000
VERSION     DATIFF010001172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2687
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456341"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..679
                     /locus_tag="VLD58_17070"
     CDS             <1..679
                     /locus_tag="VLD58_17070"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSB56077.1"
                     /translation="VKPFASRFRVLRVDLRGHGRSDVPPPPYTLAGFADDVHALLREL
                     RLAPAHVVGLSLGGMVAQVLALDHPDAVRSLVLADTVSTLPAEARPVMIERGEAAKRG
                     GMAAITDATLARWFTPGFMGSDVVARCRQRLLSDPVTGWAAAWRAISELDIESRLPEI
                     RVPTLVITGEADVASPVARAQAMAARIPGARLEIVPGAPHMAPLERPDVFNAAVLRFW
                     RSAAAEV"
     gene            705..1040
                     /locus_tag="VLD58_17075"
     CDS             705..1040
                     /locus_tag="VLD58_17075"
                     /inference="COORDINATES: protein motif:HMM:NF025479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4286 family protein"
                     /protein_id="HSB56078.1"
                     /translation="MPEATRRGLLLVMIEVDPAHEEEFNRWYNEEHFPERKACPGFLS
                     ARRFLAVEGAPKYLALYELESPEVLQSAAYQKIYPPSEWTKSISQHFLRTVRNVYVEI
                     TPPAGGTPA"
     gene            1087..1473
                     /locus_tag="VLD58_17080"
     CDS             1087..1473
                     /locus_tag="VLD58_17080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56079.1"
                     /translation="MKVTHIYTGEDNRSHFEDLDIPLERAVYGSESKLIPSSGVIFRE
                     NRVGDALDFHTAPRRQFVITIRGVGEIECGDGSRRRFGAGDIMLADDTTGQGHITREI
                     EGPRRAIFIPLPPDLDVSVWRVGKAG"
     gene            1494..2534
                     /locus_tag="VLD58_17085"
     CDS             1494..2534
                     /locus_tag="VLD58_17085"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HSB56080.1"
                     /translation="MRQTGKPPILILPNVTFQKYHDEDRPLPYEATPAKVRDELVRRL
                     PDVEIQLAGDDAAARARLPEAPIILTERMTPEMLVSARRLAWLQFPGSGPDHFFKLSG
                     VPAEEFRRRGITVLNSPGISRIPVAEQVMALALGLVRDLPRAFRQQLRREWRIYCADE
                     LCGKTFGIIGVGAIGSRVAELAKAFGMRVIGTRAHPEVRPPAVDQVYGPDQTERVIRE
                     ADILLLACPLTPGTRGMMGRRQFALMKPTAYFINVSRGENVDEEALAEALQTGKIAGA
                     GLDTFGPLDRGDPKLQEALSPTSRLWECANVIVMPNNAASTPRYFEYFAELVAENYRR
                     ALLGEPFISQVA"
BASE COUNT          409 a          886 c          981 g          411 t
ORIGIN      
        1 ggtgaagccg ttcgcgtccc gatttcgggt cctgcgggtg gacctccggg gccacggccg
       61 ctcggatgtt cccccaccgc cctacacgct cgcaggcttc gccgacgacg tgcacgccct
      121 cctgcgtgag ctgcggctgg ccccggcgca cgtcgtcggt ctgtcgctcg gcggcatggt
      181 tgcccaggtg ctcgcgcttg accatcctga cgcggtgcgt tccctggtcc tggccgacac
      241 cgtcagcacg cttccggccg aggcgcggcc ggtcatgatc gagcggggag aggcggcgaa
      301 gcgcgggggg atggcggcga tcaccgacgc gacactggcc aggtggttca cgccggggtt
      361 catgggctcc gacgtggttg cccgctgccg gcaacgcctg ctctcggatc cggtgaccgg
      421 ctgggcggct gcttggcggg ccatctccga gctggatatc gagtcgcggc tcccggagat
      481 ccgggtcccg accctggtga tcaccgggga ggcggatgtg gcgtcgccgg tcgcgcgggc
      541 gcaggccatg gcggcacgca tccccggggc ccgcctcgag attgtccccg gcgcgccgca
      601 catggcgccg ctggagcgcc ccgatgtctt caacgccgcg gtcctgcgct tctggagaag
      661 cgccgcggcc gaggtgtgac ccgatccggg aaaggagccg tccgatgcct gaggccacgc
      721 gccggggtct gctgctggtg atgatcgagg tggatcccgc gcacgaggag gagttcaacc
      781 gctggtacaa cgaggagcac ttcccggagc ggaaggcgtg ccccgggttc ctcagcgccc
      841 gccgcttcct tgccgtcgag ggtgcgccca agtatctggc cctctacgaa ctggagagcc
      901 cggaggtgct ccagagcgcc gcctaccaga agatctatcc accgtccgag tggaccaaga
      961 gcatcagcca gcacttcctc cgcacggtcc ggaacgtgta cgtggagatc acgccgcccg
     1021 ccggcggaac tccggcgtga agcgcgcggc cggcgctcgg aggaaagaca accagggagg
     1081 acgaccatga aggtgacaca catctacacc ggggaggaca accgctcgca cttcgaggac
     1141 ctggacatcc cgctggagcg tgccgtgtac gggagcgaat cgaagctgat cccttcctcc
     1201 ggcgtgatct tccgggagaa ccgggtgggt gacgccctgg atttccacac cgccccgcgg
     1261 cggcaattcg tcatcacgat caggggtgtg ggagagatcg agtgcggcga cgggagtcgg
     1321 cgccgctttg gcgccggcga catcatgctg gcggacgaca ccaccggcca ggggcacatc
     1381 acccgggaga tcgagggccc gcggcgggcg atcttcatcc cgcttccccc ggacctcgac
     1441 gtgagcgtct ggcgcgtcgg caaggccggc tgagcggacg cgggctggca gccatgaggc
     1501 aaaccggcaa gccgcccata ctcatcctgc cgaatgtcac gtttcagaag taccacgacg
     1561 aggatcggcc gctgccctac gaagcgacgc ccgccaaggt gcgcgacgag ctggtgaggc
     1621 ggttgccgga cgtcgagatc cagctggcag gggatgacgc ggcggcgagg gcgcgactgc
     1681 cggaggcgcc catcatcctg acggagcgca tgacgcccga gatgctggtg agcgcgaggc
     1741 ggctcgcctg gctgcagttc ccgggctccg gacccgacca cttcttcaag ctgtcgggcg
     1801 tgccggccga ggagtttcgg cgccgcggca tcacggtgct caattcgccc ggcatctccc
     1861 ggatcccggt ggcggagcag gtgatggcgc tggcgctggg cctggttcgc gatctcccgc
     1921 gggccttccg gcaacagctg cggagggagt ggaggatcta ttgcgcggac gagctgtgcg
     1981 ggaagacctt cgggatcatc ggggtaggtg ccatcggctc ccgcgtggcc gagctggcca
     2041 aggccttcgg gatgcgtgtg atcggcacac gcgcgcaccc ggaggtgcgt ccgccagcgg
     2101 tcgatcaggt gtacggaccc gaccagaccg agcgggtgat tcgagaggcg gacatcctcc
     2161 tgctggcctg ccccctcact cccgggaccc gcggcatgat gggccgccgg cagttcgcgc
     2221 tgatgaagcc gacggcctac ttcatcaacg tgtcgcgagg cgagaacgtc gacgaggagg
     2281 cgctggcgga ggcgctgcag acggggaaga tcgccggggc gggactcgac acgttcggtc
     2341 cgctcgaccg gggggacccg aagctccagg aggccctctc gcccacgagc cggctctggg
     2401 agtgcgcgaa cgtgatcgtc atgccgaaca acgccgcctc gacccctcgg tacttcgagt
     2461 acttcgcgga gctggtggcg gagaactatc gccgggcgct cctgggcgag ccgttcatca
     2521 gccaggttgc ctgaggaggt cgcccggacg atccggccgc cgggtccggg tgagggagtc
     2581 agaggagcgt cgatgggtgc tcgggtgggc aggctgctgg cgcgttccat cgaggcgacg
     2641 gtgggagcga tcttctccct gatactcgtc ctcgcgctgc tggaggt
//
LOCUS       DATIFF010001173         1067 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_611015, whole genome shotgun sequence.
ACCESSION   DATIFF010001173 DATIFF010000000
VERSION     DATIFF010001173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_611015"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            73..405
                     /locus_tag="VLD58_17090"
     CDS             73..405
                     /locus_tag="VLD58_17090"
                     /inference="COORDINATES: protein motif:HMM:TIGR03433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HSB56081.1"
                     /translation="MAGSDLFTGSLELLILKAVSWGPRHGYAIGQWLRQTSGEVLAVQ
                     EGALYPALHRLERRGLLAEEWGISETNREAKFYSLTPAGRKHLKAEHARWHEYARVMT
                     LSLSAEHP"
     gene            415..>1067
                     /locus_tag="VLD58_17095"
     CDS             415..>1067
                     /locus_tag="VLD58_17095"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease prefix domain 1-containing protein"
                     /protein_id="HSB56082.1"
                     /translation="MKRIFHLGQSAEHVTDEVRRELDHHIELRAREFEGQGMSPAAAR
                     EAALASFGDRTAIESEVREARRATVEARERRDWWSELVQDLRVAARGLRRTPGFTIVA
                     LLTLALGIGANSAIFSVVRSILLRPLPYPDAGRLVQVWSDYRENNGRTEPEWLTPPDF
                     ADWRDGNKSFETMAAYGGWGPDLTGSGEPASLNGLTVSGDYFTVLGVAPALGRPLLPS
                     "
BASE COUNT          163 a          384 c          356 g          164 t
ORIGIN      
        1 cctcccccac cccttgccgt actacccctt gctgaactag gtatcccccc gacccccgac
       61 ccctgaccca acatggctgg ctccgatctc ttcaccggct cgctcgaact cctgatcctc
      121 aaggccgtca gctggggacc caggcacggc tacgccatcg gccagtggct ccggcagacg
      181 agcggcgagg tgctggccgt ccaggagggc gccctctacc ccgccctgca ccgcctcgag
      241 cgccgcggct tgctggccga ggaatggggc atcagcgaaa ccaaccgcga ggccaagttc
      301 tacagcctca ccccggcggg gcggaagcat ctcaaggctg agcacgcccg ctggcatgag
      361 tacgcgcggg tcatgaccct ctcactatcc gcagaacatc cctgaggcgc cgccatgaaa
      421 cggatctttc atctgggcca gtcggcggaa catgtgaccg atgaagtgcg gcgtgagctg
      481 gaccatcata tcgagttgcg ggctcgcgag ttcgagggcc agggcatgtc gccggcggcg
      541 gcgcgggagg cagcgctggc ttcgttcggc gaccggacag ccatcgagtc cgaggtccgc
      601 gaggcccgcc gcgccaccgt cgaggctcgc gagcggcggg actggtggtc ggagctggtc
      661 caggatctcc gggtggcggc gcgcggcctg cggcgcactc ccggcttcac catcgtggcg
      721 ctgctgaccc tggcgctcgg gatcggcgcc aacagcgcca tcttcagcgt ggtccgctcg
      781 atcctgctcc ggccgctgcc ctatcccgac gcgggccggc tggtccaggt gtggagtgac
      841 taccgcgaga acaacggccg gaccgagccg gagtggctga ccccgcctga cttcgccgac
      901 tggcgggatg gcaacaagag cttcgagaca atggccgcct atggtggatg gggacccgac
      961 ctgaccggat cgggggagcc cgcctcgctc aacggcctca cggtgagtgg cgactacttc
     1021 acggtgctcg gtgtggcccc ggccctgggc cggccgctcc tcccgtc
//
LOCUS       DATIFF010001174         1453 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_304787, whole genome shotgun sequence.
ACCESSION   DATIFF010001174 DATIFF010000000
VERSION     DATIFF010001174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1453
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_304787"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1399)
                     /locus_tag="VLD58_17100"
     CDS             complement(<1..1399)
                     /locus_tag="VLD58_17100"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HSB56083.1"
                     /translation="MKLRLAAGLLLGAWAATGLGQSLPAYSTWDADIINTESVSQTGA
                     GVYVAVLDTGLVPYWRDYFPQARIAEDLGTGFDQSVTFKAKGNPCEFDVEVGQLRQTT
                     WVGSIGSTHGTHVTSTIVGYNYRSNFDAIAGFPLPPIYVKGIAPGATVIPVKVLADYQ
                     VPALPKCTDPGPTPAQGVVFGTSGMVAAGIDYATNLAIAGRRPMVINMSLGGPELSAV
                     EKAAIDRAIANGVIVVVAAGNEGETGMSFPGAYPPVISAGAAGWTGEWLFPGDGPRYR
                     MWWLKYPFAPLLPGSGEVADPTVAGDVYVTDFSSRALLAQGQELDVLAPGSWVRGPFP
                     GDPGYSRLPWYSRGVGDLHGAQTNFFYVGGTSMATPHVTGVAALLKAQDPSRDWRTIK
                     NLILAGAEPAAALSATITGGRLNALNALTCTGRNLQSRLLPRETATATPGYPLTLAAV
                     NIVCGVPAGDVVVTVS"
BASE COUNT          212 a          479 c          536 g          226 t
ORIGIN      
        1 gtgagaccgt gaccacgaca tcgcctgcgg gaaccccgca gacgatgttc actgccgcca
       61 gcgtcagcgg ataacccggc gtggccgtgg ctgtttcgcg cggcagcagc cgagattgca
      121 ggttccggcc ggtgcaggtg agcgcattca gcgcattcag ccgccctccc gtaatcgtcg
      181 cgctgagcgc cgcagccggc tcggcgccgg cgagaatcag gttcttgatg gtccgccagt
      241 cccggctggg gtcctgcgcc ttgagaaggg ccgccactcc ggtcacgtga ggtgtcgcca
      301 tcgaggtgcc gcccacgtag aagaagttcg tttgcgctcc gtgcaggtca cccaccccgc
      361 gggagtacca ggggagccgc gagtagcccg ggtcgcccgg gaacggcccg cgcacccagg
      421 agccgggggc gaggacgtcg agctcctggc cctgggcgag cagggcccgg ctcgagaagt
      481 cggtgacgta cacgtcgcct gcgaccgtcg ggtcggccac ctcgccgctg ccggggagga
      541 gcggcgcgaa cgggtacttg agccaccaca tccggtagcg ggggccgtcg ccggggaaga
      601 gccactcccc cgtccagccc gcggccccgg cggagatgac cggcggatag gcgcccggga
      661 agctcatgcc ggtctcgccc tcgttcccgg cggcgacgac cacgatgacg ccgttggcga
      721 tggcccggtc gatggccgcc ttctccaccg cgctcagctc cggaccgccc aggctcatgt
      781 tgatgaccat gggccgacgg ccggcgatgg caaggttggt cgcgtagtcg atccccgcgg
      841 ccaccattcc gctcgttccg aagaccacgc cctgcgccgg ggtggggccc gggtcggtgc
      901 atttcggcag cgccggaacc tggtagtcgg cgagcacctt caccgggatg acggtggctc
      961 cgggggcgat gcccttcacg tagatgggcg ggagcgggaa gccggcgatg gcgtcgaagt
     1021 tgctccggta gttgtagccg acgatggtgc tggtcacgtg ggtgccatgg gtcgagccga
     1081 tggagccgac ccaggtcgtc tgccggagct ggcctacctc gacgtcgaat tcgcaggggt
     1141 tgcccttcgc cttgaaggtc accgactggt cgaagccggt gccgagatcc tcggcgatgc
     1201 gcgcctgggg gaagtagtcg cgccagtagg ggacgagccc ggtgtcgagc accgcgacgt
     1261 acacgccggc gccggtctgc gaaacgctct cggtgttgat gatgtcggcg tcccaggtcg
     1321 agtaggcggg gagcgactgg cccaggccgg tcgcggccca ggcgcccagg aggagtcctg
     1381 ctgcgaggcg gagcttcatg gtggttctcc gttgtggcgg ggtcgaatgg ctcacacttg
     1441 catacccgag cct
//
LOCUS       DATIFF010001175         1132 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1687554, whole genome shotgun sequence.
ACCESSION   DATIFF010001175 DATIFF010000000
VERSION     DATIFF010001175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1687554"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(102..500)
                     /locus_tag="VLD58_17105"
     CDS             complement(102..500)
                     /locus_tag="VLD58_17105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56084.1"
                     /translation="MRAHALRARPLVHVGLGAGLASGCSSWHTVPVAPQQLVAETRPG
                     AVRVRQPGGTRLVIARPQIVGDSLTGSSGRGPVGVGSSDVTENAVRRTSALKTGGLVL
                     GILALPFALIGGACALGAGCHFGAGAWGRP"
     gene            645..>1132
                     /locus_tag="VLD58_17110"
     CDS             645..>1132
                     /locus_tag="VLD58_17110"
                     /inference="COORDINATES: protein motif:HMM:NF023113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2380 domain-containing protein"
                     /protein_id="HSB56085.1"
                     /translation="MPGITSRATRLGGLMVAALGIGMSPAGAQTEAPRRPEPPDARVA
                     VFQASLYNDQANLREAGDSTKSGIATAVLRERLTELLGPQLAPFGEVDSITASPGAVA
                     MAGGPLCNAQVTCARWVAGRVGARWVVLAKVSKTSNLIWLLSAQLIRVENGEIILDDS
                     TEL"
BASE COUNT          177 a          403 c          406 g          146 t
ORIGIN      
        1 ccgatcatct cgcccagcgg gcaggccaag ccggtcgtgg tcggcccgga cgggctcacg
       61 agcgtccggc tggagttcga cacggggatc cgctagggct ctcagggcct gccccaggct
      121 ccggcgccga aatggcagcc agcgccaagc gcgcaggccc caccgatgag ggcgaagggc
      181 agcgcgagta tgccgaggac cagaccgccc gtcttgagcg cgctggtccg gcgcaccgcg
      241 ttctcggtca cgtcgctcga gccgacaccg accggcccgc gtccgctcga gcctgtcagc
      301 gagtcaccga cgatctgcgg ccgcgcgatc accagacggg tgccgcccgg ctgccggacg
      361 cgcaccgcgc cggggcgggt ctcggcgacc aactgctgcg gggccacggg caccgtgtgc
      421 cagctgctgc agccagaagc gagtccagca cccagcccca cgtgcaccag cggccgggct
      481 cgtagagcat gtgcgcgcat acggacctcc ttcgtcaggc caggacgacc agctggacga
      541 ggagagattc ccgcgtcggg atcaagcgcc ggtcaagtgg gacaccgacg gccccggagc
      601 cgggagcgct ggcgggaccg gcgaggccgc gcctacgttg ggtcatgcct ggcatcacat
      661 cacgggccac ccgtctcggc ggcctcatgg ttgcggcgct cgggatcggg atgtcgccgg
      721 ccggggccca gaccgaagcc ccgagacgtc cggaaccgcc ggatgcccgc gtcgcggtct
      781 ttcaggcctc gctctacaac gatcaggcca acctcaggga ggccggtgac tccaccaagt
      841 cggggatcgc cacggcggtg ctccgggagc ggctgacgga gctcctgggg ccgcagctcg
      901 cgcccttcgg ggaagtagac tccatcaccg cttcacctgg agccgtcgcc atggccggtg
      961 ggcccctgtg caacgcacag gtgacctgcg cccgatgggt cgcggggcgc gtcggggcgc
     1021 gttgggtggt gctcgccaag gtgagcaaga cgagcaacct gatctggctg ctgagcgccc
     1081 agctgatccg ggtcgagaac ggcgagatca tcctcgacga ctcgaccgag ct
//
LOCUS       DATIFF010001176         1207 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1996320, whole genome shotgun sequence.
ACCESSION   DATIFF010001176 DATIFF010000000
VERSION     DATIFF010001176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1996320"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..>1207)
                     /locus_tag="VLD58_17115"
     CDS             complement(1..>1207)
                     /locus_tag="VLD58_17115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56086.1"
                     /translation="PHFLLVWLSVEFYLRRSRRVDAAAALPETLAIGGLLAAYGLAIL
                     VLTPEYLGLVRLLAEPYNRFLHDPFLHLLVTGPGAVLALFALLAWVALRPQARHPELW
                     TAVAIATAACLLAGAAQQKGLRYHFYPSFALGSVLLGLTVVDVTRPLGNRVRVVYRRL
                     AAAVLAATVLVVCVQNVAVAAGAGRDSDRDQFDELVQTVQSHAGRNGVFVMSYHLRSA
                     YPLINYSGARSASRFPHLWILASEYADELGSDRPLRYHDEAHMAPVERYLNQAVVEDF
                     QRHRPDLLIVFRHARDLPVNGLRRLDYIRYFARDPLMSRMLGDYQLIRELGDFLVYQR
                     LPPGAVRTGAAPAVTTGTQDVVGVQESGVHLRIADPTTLMAVLTFLATLLVMARRDDE
                     RRGSGAPGE"
BASE COUNT          227 a          396 c          434 g          150 t
ORIGIN      
        1 tcactcgccg ggagcaccgc tcccccgtcg ctcatcgtcg cgccgtgcca tcaccagcag
       61 cgtcgccaga aaggtgagca cggccatcag ggtcgtgggg tcggcgatcc gaagatggac
      121 cccgctttcc tgaacgccga ccacatcctg ggtcccagtg gtaaccgccg gagcggcacc
      181 ggtccgcact gctcccggtg gcaatcgctg gtagaccaga aaatcgccga gctcccggat
      241 caactgatag tcgccgagca tgcgcgacat cagagggtcg cgggcgaagt accggatgta
      301 gtcgaggcgg cgaagcccgt tgaccggcag gtcgcgggca tggcggaaca cgatcagcag
      361 gtcgggccgg tgccgctgga agtcctccac gaccgcctgg ttcaggtacc gctcgaccgg
      421 cgccatgtgg gcctcgtcgt ggtagcgcag ggggcggtcg ctgcccagct cgtcagcata
      481 ctctgaggca aggatccaga ggtgggggaa ccgggaggcg gagcgggcgc cgctgtagtt
      541 gatcaggggg taggccgagc gcagatggta cgacatgacg aacacgccgt tgcgcccggc
      601 gtgggactgg accgtctgca ccagctcatc gaactggtcg cggtccgagt cgcgccccgc
      661 tcccgcggcg accgctacat tctggacgca caccaccagc accgtggccg ccagcaccgc
      721 ggccgccagg cggcgataca ccactcgaac gcgattgccc agcggccggg tgacatccac
      781 cacggtcagg ccgagcagga cgctgcccag cgcgaaagag gggtagaagt gataacgcag
      841 acccttctgc tgggcagcgc cggcgaggag gcatgccgcc gttgcgatgg cgacggcagt
      901 ccagagctcg ggatggcgcg cctgtggccg gagggcgacc cacgcgagca acgcgaacag
      961 cgcaagcacc gccccggggc cggtgacgag caggtgcaga aacgggtcgt gcaggaaacg
     1021 attgtagggt tccgcaagca ggcggaccag cccgaggtac tccggcgtca ggaccaggat
     1081 cgcgagcccg taggccgcga ggaggccgcc gatcgcgagc gtttcgggaa gggccgccgc
     1141 cgcgtccact cggcgggacc gccggaggta gaactcgacc gacaaccaga ccaggaggaa
     1201 gtgcggc
//
LOCUS       DATIFF010001177         1229 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_765524, whole genome shotgun sequence.
ACCESSION   DATIFF010001177 DATIFF010000000
VERSION     DATIFF010001177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1229
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_765524"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            74..>1229
                     /locus_tag="VLD58_17120"
     CDS             74..>1229
                     /locus_tag="VLD58_17120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
                     /protein_id="HSB56087.1"
                     /translation="MDKTGNVRRYESVLVRRTYRDGKKVRHETLANLSKLPAEVIAAI
                     EATLKGQTLAPAGGEFQITRSLPHGHVAAVAAMAHQLGLPAMLGPPCRARDLALGLII
                     SRVVRPSSKLATLGWWADCTLGVDLDLAGASTDEIYAAMDWLADRQQAIETKLAAKHL
                     SAEVNPSRMALFDLTSSWVTGRCCELAARGYSRDGKKGLPQIEYGMLTDPAGRPVAVR
                     VFSGDTADPTAFTDIVEVIRTRFGLTRLVLVGDRGMITSARITALRELNDAGTGFGWI
                     TALRAPAIAKLAAEDGPLQMSLFDAQDLAEISHPDHPGERLIACRNPALAAERARKRA
                     ELLDATEADLAAIAERVAAGRLAGAGRIGETVGKVIGKYKVGKHFERRITD"
BASE COUNT          210 a          405 c          431 g          183 t
ORIGIN      
        1 tgagttcgtc ttgtagtctt taagtgtggc gaaaccaatg cggatgcatg tagcccggac
       61 gccgagcaag tatgtggaca agacgggcaa tgtgcgccgc tacgagtcgg tgctggtgcg
      121 ccgcacctat cgggacggca agaaggtccg ccacgagacc ctggccaact tgtccaagct
      181 gcccgcggag gtgatcgccg cgatcgaggc gacgctgaag ggccagacgc tggcgcccgc
      241 gggcggggag ttccagatca cccggtcgct gccgcatggg catgtcgcgg cggtggcggc
      301 gatggcccac cagttggggt tgcccgcgat gctgggaccg ccatgccggg cgcgcgatct
      361 ggcgctgggg ttgatcatct cccgggtagt gcggcccagc tcgaagttgg ccaccctggg
      421 gtggtgggcc gattgcacgt tgggcgtcga tcttgacctg gccggcgcgt ccaccgacga
      481 gatctacgcc gcgatggact ggctggccga tcggcagcag gcgatcgaaa ccaagctggc
      541 cgccaaacac ctttccgcag aagtgaaccc gtcgcggatg gcgttgtttg atctgaccag
      601 ctcatgggtg accggccggt gctgcgagct ggccgcgcgc ggctactccc gcgacggcaa
      661 aaaaggcctg ccccaaatcg aatacggaat gctcaccgac ccggcgggcc ggccggtggc
      721 ggtacgggtg ttttccgggg ataccgccga cccgaccgca ttcaccgaca tcgtcgaggt
      781 catccgcacc cggttcgggc tgacccggct ggtgctggtc ggggatcgcg gcatgatcac
      841 ctccgcgcgc atcaccgcgc tgcgcgaact caacgacgcc ggaaccggtt tcgggtggat
      901 caccgcgcta cgcgcaccgg cgatcgccaa actggccgcc gaggacgggc cgctgcagat
      961 gagcctgttc gatgcccaag acctcgccga gatcagccac cccgaccacc ccggggaacg
     1021 gctgatcgcc tgccgcaacc ccgccctggc cgccgagcgg gcccgcaaac gcgccgagct
     1081 gctggacgcc accgaggccg atctggcggc catcgccgag cgggtggcgg ccggccggct
     1141 ggccggggcc ggccgcatcg gggaaaccgt cggaaaggtc atcggtaaat acaaggtggg
     1201 caagcacttt gagcgcagga tcaccgaca
//
LOCUS       DATIFF010001178         1429 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1380843, whole genome shotgun sequence.
ACCESSION   DATIFF010001178 DATIFF010000000
VERSION     DATIFF010001178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1429
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1380843"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..383)
                     /locus_tag="VLD58_17125"
     CDS             complement(<1..383)
                     /locus_tag="VLD58_17125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RpiB/LacA/LacB family sugar-phosphate isomerase"
                     /protein_id="HSB56088.1"
                     /translation="MPEVIPIGADHAGYELKERLVETLRALGYAPLDLGTHSAESTDY
                     PDYAHQVAARIEHHDAQRGVLLCGTGLGMSYAANRHPGVRAAVAWTPEVARLAREHND
                     ANVLILPARFVSADEGVEILKTWLTT"
     gene            complement(544..>1429)
                     /locus_tag="VLD58_17130"
     CDS             complement(544..>1429)
                     /locus_tag="VLD58_17130"
                     /inference="COORDINATES: protein motif:HMM:NF012434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase dimerization
                     domain-containing protein"
                     /protein_id="HSB56089.1"
                     /translation="ARGMTYKAAVAGINLGGGKAVIVGDNKRADREAVFRAHGRFIET
                     LNGRYITAEDIGTSPTDMEYIKLETDHVAGLLGLSGDPSPVTGYGVYVGMKAAAKVRW
                     GDASLKGKTVAVQGAGKVAYYLCQHLHQEGVRLIVTDIDQEKVRRVVREMGATAVAPE
                     AIYDQAADVYAPCALGATINDETLQRLKVEVIAGGANNQLAEDRHGEALESRGILYAP
                     DYVINGGGVINVYGELHRWPAERSQKKAGEIYETLLRIFEIARREKIPTYRAADRLAE
                     QRIAAVAGLDRMWMGGRR"
BASE COUNT          196 a          528 c          448 g          257 t
ORIGIN      
        1 gtcgtcagcc aggtcttcag aatctccacg ccctcgtcgg cgctcacgaa tcgggccggg
       61 agaatgagga cgttggcatc gttgtgttcc cgggccagcc gggccacctc cggggtccag
      121 gccacggcgg cccgcacccc ggggtgccgg ttggcggcgt aggacattcc cagcccggtg
      181 ccgcacagca gcaccccgcg ttgcgcgtcg tgatgctcga tgcgcgcggc cacctggtgg
      241 gcgtaatccg gatagtcggt ggactccgcc gagtgcgtgc cgagatccag cggcgcgtac
      301 cccagcgctc ggagcgtttc gaccagccgc tctttcaact cgtagccggc gtgatcggct
      361 ccgatgggga tcacttcggg catcgcgttc ctaatgtata agaattcggc tgcggaatag
      421 agggtggatc ggcgaaaggc ggtacgacgg tacggcggca ggacggtaga tgacggtcaa
      481 ctccgaatcg cccagtcccg aatccgccac tggcgtaccg tcctaccgcc ataccgccgc
      541 gccctatcgc cttcccccca tccacatccg gtccagcccc gctactgccg cgatccgctg
      601 ctccgccagc cggtcggcag cccggtaggt gggaatcttc tcccgccggg cgatctcgaa
      661 gatgcggagc agggtttcgt agatctcccc cgctttcttc tgcgaccgct ccgccggcca
      721 gcggtgcagc tcgccgtaga cgttgatcac cccgccgccg ttgatgacgt agtccggcgc
      781 gtagaggatc ccgcggctct ccagcgcctc cccgtgacgg tcctcggcca actggttgtt
      841 ggcgccgccg gcgatgacct ccaccttgag ccgttgcagg gtctcgtcgt tgatcgtggc
      901 ccccagcgcg cagggcgcgt agacgtcggc cgcctggtcg tagatcgcct ccggcgccac
      961 cgcggtcgcg cccatctccc gtaccacccg gcgcaccttc tcctggtcga tgtcggtgac
     1021 gatcagcctc accccttcct ggtgcaggtg ctggcagagg tagtacgcga ccttgcccgc
     1081 cccctgcacc gccaccgtct tccccttgag cgaggcgtcg ccccagcgca ccttcgccgc
     1141 ggccttcatc ccgacgtaga ccccgtaccc ggtgaccggc gacggatccc ccgagagacc
     1201 gaggagcccg gccacgtggt cggtctccag cttgatgtac tccatgtcgg tcgggctggt
     1261 gccgatgtct tccgcggtga tgtagcgccc gttcagcgtc tcgatgaagc gcccatgggc
     1321 ccggaatacg gcctcccggt cggcgcgctt gttgtcgccg acgatgaccg ccttcccccc
     1381 gcccaggttg atcccggcga ccgcggcctt gtaggtcatc ccccgcgcc
//
LOCUS       DATIFF010001179         1694 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_150334, whole genome shotgun sequence.
ACCESSION   DATIFF010001179 DATIFF010000000
VERSION     DATIFF010001179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150334"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..465
                     /locus_tag="VLD58_17135"
     CDS             <1..465
                     /locus_tag="VLD58_17135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HSB56090.1"
                     /translation="PRIEGSALVVERNQERRIRPDLGGHVPKLEDGPWPAFPADVMSI
                     AIVTATQCAGLLLVFEKMFESRLFFVDKLIGMGARIVLCDPHRAVIAGPSPLRGGTVE
                     SPDIRAGMAMLLAALAAEGPSVIHNIGQIERGYEHIDSRLRGLGAAIERLDG"
     gene            458..1201
                     /locus_tag="VLD58_17140"
     CDS             458..1201
                     /locus_tag="VLD58_17140"
                     /inference="COORDINATES: protein motif:HMM:NF014619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase family protein"
                     /protein_id="HSB56091.1"
                     /translation="MDERPVDGPVPRLELIEWGSRFGIRAGITVPGDGPEPFDLGLAG
                     RIAPTGAVIPRWREFLASMAPFSGIVISHQVHGTTIRVHERVPGILLAADGDGHLTSS
                     PGLLLAVSVADCIPVYVADPARRAVALVHAGWRGTAGGILPRAIGALRERGSRVENLW
                     VHCGIGICGRCYEVGPEVFEACGVPVPAGGKGALDLRGVLLEQVRRAGVENVSTSGYC
                     SAHGPGRFFSHRASRGADGRMVAYLGLTP"
     gene            1226..1600
                     /locus_tag="VLD58_17145"
     CDS             1226..1600
                     /locus_tag="VLD58_17145"
                     /inference="COORDINATES: protein motif:HMM:NF037015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HSB56092.1"
                     /translation="MARRPGWWGVPILTLSLACGVGGGTSASDGTPPLISIDAPAPNA
                     QVGGTVSIDATVVDDFGVDQVKILVDEVVIATLFTPPFHAAWNTAAAANNSAHVIRIE
                     AKDLSGNTSTKSVGVTVVRGTQ"
BASE COUNT          237 a          584 c          593 g          280 t
ORIGIN      
        1 ccccgcatcg agggctccgc gctcgttgtc gagcggaatc aggaacggcg catccgcccc
       61 gatctgggcg gccacgttcc caagctcgag gacggaccct ggcccgcctt tcccgccgac
      121 gtgatgtcca tcgcgatcgt caccgccacc cagtgcgccg ggctcctgct cgtcttcgag
      181 aagatgttcg agtcccggct cttcttcgtg gacaagttga tcggcatggg cgcccggatc
      241 gtcctgtgcg atccccaccg cgcggtgatc gccggaccct cccccctccg gggcggcacc
      301 gtcgagtctc ccgacatccg ggccggcatg gccatgctcc tcgcggccct cgccgcggag
      361 gggccgagcg tgatccacaa catcggccag atcgagcgcg gctatgagca catcgactcc
      421 cgccttcgcg gactcggcgc cgccatcgaa cgcctggatg gatgagcgtc cggtcgacgg
      481 accggttcca cggctcgagc tgatcgaatg ggggtcccgg ttcggcatcc gggcggggat
      541 caccgttccc ggcgacggac cggagccgtt cgatctcggg ctcgcgggca ggatcgcccc
      601 caccggcgcg gtcatcccgc gctggaggga attcctcgcg agcatggcgc ccttctcggg
      661 catcgtgatc tcccaccagg tccatggcac cacgatccgg gtgcacgagc gggtgcccgg
      721 cattctgctc gcggcggacg gagacgggca cctcacgtcg agcccggggc tccttctcgc
      781 ggtgagcgtc gccgactgca ttcccgtcta tgtggcggac ccggcccgac gagccgtcgc
      841 cctggtgcat gcggggtggc ggggcaccgc gggtggcatc ctccccaggg cgatcggcgc
      901 gctgcgcgaa cggggaagcc gtgtggagaa cctgtgggtc cactgtggaa tcggcatctg
      961 cggccgctgc tacgaggtgg ggccggaagt cttcgaagcg tgcggggttc cggttccggc
     1021 cgggggaaag ggggctctcg acctccgcgg cgtgctcttg gagcaggtgc gccgagcggg
     1081 cgtggaaaac gtttccacat cgggatactg ttcggcacac ggccccgggc ggttcttttc
     1141 gcaccgggcc tcgaggggcg ctgacggccg gatggtggcg tacctcggac tgactccata
     1201 gacttcggca ggaggcggta gccgaatggc aagacgacct ggctggtggg gagttccgat
     1261 actgacgctt tcgctcgcct gcggcgtggg cggcggcacc agcgcgtcgg acggaacccc
     1321 gcccctgata tcgattgacg ccccggcgcc caacgcccaa gtggggggca cggtgtccat
     1381 cgacgccacg gtggtcgacg atttcggcgt ggatcaggtc aagatcctgg tggatgaggt
     1441 ggtcattgcc accctcttca cgccaccatt ccacgccgcc tggaatacgg ccgccgcggc
     1501 caacaactcg gcccatgtca tccggatcga ggccaaggac ctgtcgggca atacctccac
     1561 caagtcggtc ggggtcaccg tcgtccgggg cacccaatag gggtggcccg cccggggtcc
     1621 ggccccggga ccgcgatttg actccccggg ggcctccggg tatctttgcc ccgcttgagc
     1681 gggtgggcgc tggg
//
LOCUS       DATIFF010001180         2776 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_305156, whole genome shotgun sequence.
ACCESSION   DATIFF010001180 DATIFF010000000
VERSION     DATIFF010001180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2776
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_305156"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1182
                     /locus_tag="VLD58_17150"
     CDS             <1..1182
                     /locus_tag="VLD58_17150"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HSB56093.1"
                     /translation="RDPVRHIPCDYARGVSSVSTFVKRTDITLLGAHTLPSRYFTSPE
                     IFAEEGEKIFLQRWLCVGREARIAQPGEYFLQQVGAESIIVLRDRERGVRAYYNVCRH
                     RGTRLCEEATGRFSGTIQCPYHAWTYTLDGQLVGAPSADTIEDFDKADWPLHRVAVAT
                     WEGFLFINLADDPEPLEEAYAPLMGRFSRFNLPALIAHRRTDYELACNWKFVVQNYSE
                     CYHCPLVHPALVKLSPPTSGENDLYSGPFLGGYMDIVDSSESLTLTGRCCGVTVGDLP
                     QEDLKRVYYYSLFPNVLLSLHPDYAMYHTIWPRDAAHTLVTCEWLFHPDTLRNPAFSP
                     DDGVEFWDQTNRQDWHVCELSQAGVQSKSYTPGPYSRREGLSAAFDQEVLRALGHRTE
                     W"
     gene            1184..2590
                     /locus_tag="VLD58_17155"
     CDS             1184..2590
                     /locus_tag="VLD58_17155"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HSB56094.1"
                     /translation="MTAPRRAIGFGDLVLFYIVTGISLRWIATAATAGPSAITIWLVA
                     WLAFYVPLALSVVELSSRHPGEGGLYLWSKRAFGDFAGFMTGWAYWTCNLPYYPSILY
                     FTAGNALFLGGARWAGLGGSPAYFIWFSLAGLALATGVNLVGLRIGRWLHNVGAIGTW
                     LPIALLLGMAAIALSRFGSATSFTASTLVPHASVKDMVFWSTIVFALGGSESASFMGD
                     EIKNVRRNLPRALLVAGILVTTGYILGTVAILVTLPRGEVSGLEGIMQAISHGAGRLG
                     MPGLIPGAALLITLSNLGAVGAWFAASARIPFVAGLDRFLPPAFGRLHPRWDTPHVAI
                     LVQAALGALFIFLGQAGTTVKGAYDVLVSMGVITYFVPYIFLFGAMIRLQWVPAEPGV
                     FRIPGGQPVAVVLAAAGLVTTLATIGLSVLPPADEPNKLLAVAKIVGLSALLLGAGVV
                     VYAGGRGRREVRSASHTM"
     gene            complement(2578..>2776)
                     /locus_tag="VLD58_17160"
     CDS             complement(2578..>2776)
                     /locus_tag="VLD58_17160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56095.1"
                     /translation="VIDAVPGADGVFAAIGAGHAFKFASLIGRVLAELALSGRAEPDL
                     TPFAIERPILKQTNPPRSYMV"
BASE COUNT          396 a          981 c          907 g          492 t
ORIGIN      
        1 cgcgaccccg tccggcatat tccgtgcgac tatgcccgcg gggtctcctc cgtgtccacc
       61 ttcgtcaagc gcaccgacat caccctcctc ggtgcgcaca cgctccccag tcgctatttc
      121 acctccccgg agatcttcgc cgaggaaggc gagaagattt ttctccagcg ctggctgtgc
      181 gtcgggcgcg aagcccgcat cgcccagccg ggagagtact tcctacagca ggtcggcgcc
      241 gagagcatca tcgtcctccg tgaccgggaa cgcggggtcc gggcctacta caacgtctgc
      301 cgccaccggg ggacgcgcct ctgcgaggaa gccaccggac ggttctccgg cacgatccag
      361 tgtccttatc acgcctggac ctacacgctc gacgggcagc tggtcggcgc cccctcggct
      421 gacacgatcg aggacttcga caaggcagac tggcccctcc accgcgtcgc ggtcgcgacc
      481 tgggagggct tccttttcat caacctggcc gacgacccgg agccgctcga ggaagcctac
      541 gcccccctga tgggccggtt cagccggttc aacctgccgg ccctcatcgc ccaccgccgg
      601 accgactacg agctcgcctg caactggaag ttcgtggtgc agaactactc cgagtgctac
      661 cactgcccgc tggtccaccc ggccctggtg aagctctcgc cgccgacgag tggagagaac
      721 gatctctaca gcggaccgtt tctcggcggc tacatggaca tcgtggactc gagcgagagc
      781 ctgaccctca cgggccgctg ctgcggcgtg acagtgggcg acctgccgca ggaggatctc
      841 aaacgggtct actactactc gctcttcccc aacgtgctcc tgagcctgca cccggactat
      901 gcgatgtacc acaccatctg gccccgggac gccgctcaca cgctggtcac ctgcgagtgg
      961 ctcttccatc ccgacacgct ccggaacccc gcctttagtc cggacgacgg cgtcgagttc
     1021 tgggaccaga ccaaccgtca ggactggcac gtgtgcgagc tcagccaggc cggcgtacag
     1081 tccaagagct atacgccggg gccgtactcc cggcgggagg ggctgtcggc cgcgttcgac
     1141 caggaggttc tgcgggcgct cgggcatcgc accgagtggt gaggtgacgg ctcctcgccg
     1201 ggcgatcggg ttcggcgatc tcgttctctt ctacatcgtc accggaatca gcctgcggtg
     1261 gatcgcgaca gcggccaccg cgggcccgag cgcgatcacc atctggctgg tcgcctggct
     1321 cgcgttctac gtgcccctcg ccctctcagt cgtcgagttg tcgtcgcgcc acccgggcga
     1381 gggcgggctc tatctctgga gtaagcgggc cttcggcgac ttcgccggct tcatgaccgg
     1441 ctgggcctac tggacctgca acctcccgta ttacccctcc atcctctact tcaccgcggg
     1501 gaacgccctc tttctgggcg gcgcccgatg ggccgggctc ggcggcagcc ccgcgtattt
     1561 catctggttc tccctggcgg gcctcgcgct cgcgaccggt gtgaacctcg tcggcctccg
     1621 gatcgggcgc tggctccaca acgtcggcgc gatcggaacc tggctaccga tcgcgctgct
     1681 gctggggatg gcggcgatcg ccctgagccg gttcggctcg gcaacatcgt tcacggccag
     1741 caccctcgtg ccgcacgcaa gcgtcaagga catggtgttc tggtccacca tcgtgttcgc
     1801 gctcggtgga tcggaatcgg cgtcgttcat gggagacgag atcaagaacg tccggcgcaa
     1861 cctgccccgc gcgttgctgg tggcgggaat cctggtcacg accggctaca tcctcggcac
     1921 ggtcgccatc ctcgtcaccc tgccccgcgg cgaggtgagc gggctcgagg gcatcatgca
     1981 ggcgatctcc catggcgcgg gccgtctggg gatgccgggc ctgatcccgg gcgccgcgct
     2041 gctcatcacg ctcagcaacc tgggcgctgt cggtgcctgg ttcgccgcga gtgcccgcat
     2101 tccgttcgtg gccggcctgg accgattcct cccgcctgcg ttcggccgcc tgcacccgcg
     2161 ttgggacacg ccgcacgtgg ccatcctggt gcaggccgcc ctcggtgccc tgttcatctt
     2221 cctggggcag gcgggaacca ccgtgaaggg agcgtatgac gttctcgtga gtatgggcgt
     2281 gatcacgtac ttcgtgccct acattttcct gttcggcgcg atgatccggc tgcagtgggt
     2341 gccggcggag cccggcgtgt tccggatccc gggcggccag ccggtggccg tcgtactggc
     2401 ggcggcgggg ctcgtgacca cgctggccac gatcggcctc tccgtcctcc cgccggcgga
     2461 cgagccgaac aagctcctcg ccgtggcgaa gatcgtgggt ctgtcggctc tgttgctcgg
     2521 cgcgggcgtg gtcgtctacg cgggagggag gggaaggaga gaagtgcgca gtgcgtctca
     2581 caccatgtag gacctgggcg ggttcgtctg cttcaggatc ggccgctcga tggcgaaggg
     2641 cgtgagatcg ggctccgccc gcccgctgag ggccagctcg gcgaggaccc tgccgatcag
     2701 cgacgcgaac ttgaaggcgt ggccggcccc gatcgccgcg aagacgccgt ccgcgcccgg
     2761 gacggcatcg atcacg
//
LOCUS       DATIFF010001181         1022 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1996648, whole genome shotgun sequence.
ACCESSION   DATIFF010001181 DATIFF010000000
VERSION     DATIFF010001181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1996648"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1022
                     /locus_tag="VLD58_17165"
     CDS             <1..>1022
                     /locus_tag="VLD58_17165"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HSB56096.1"
                     /translation="GRGFFGGSAISLSDILGNHQLVFAGYVNGRISEAQVLAAYANLA
                     HRINWAVGLSQDPYYFLEPSAIEPGTEPGTNNFITNIRRLVVRSAFASAYYPVSRFQR
                     IETGMRFANVDDAILQIKEPYDPATGFATDDPFLETDNLPGVTYLQPSTALVFDNSLF
                     GYVGPFYGQRYRLELAQTLGDWRFTQVTADYRRYDRILGPIVFATRALYFGRIGRNAR
                     EFRIFAGSTDLIRGNTSGSYRRNECLNADDPNAETGCSELDRLVGTQIGVASAELRIP
                     VLNPSYGTPAAIPPLELALFYDIGLAWDDQSTLKWKREAGDDPVKVRTPLKTLGVSLR
                     TNLFGF"
BASE COUNT          161 a          388 c          312 g          161 t
ORIGIN      
        1 tcggccgcgg cttcttcggc ggctccgcca tctcgctgag cgacatcctg ggcaaccacc
       61 agctggtctt cgccggctac gtcaacggcc ggatcagcga ggcccaggtg ctggcggcct
      121 acgccaacct ggcccaccgg atcaactggg cggtcggcct ctcccaggac ccgtattact
      181 tcctcgagcc gagcgccatc gagcccggca ccgagccggg caccaacaac ttcatcacca
      241 acatccgccg gctggtggtg cgctcggcgt tcgcctcggc gtactacccg gtgagccggt
      301 tccagcggat cgagaccggg atgcgcttcg ccaacgtgga cgatgccatc ctccagatca
      361 aggagccgta cgaccccgcc accggcttcg ccaccgacga cccgttcctg gagaccgaca
      421 acctgccggg ggtgacctac ctccagccgt ccaccgcgct ggtgttcgac aactccctgt
      481 tcggctacgt cgggccgttc tacggccagc gctaccggct ggagctggcg cagaccctgg
      541 gcgactggcg cttcacccag gtcaccgccg actaccggcg ctacgaccgg atcctcggcc
      601 ccatcgtttt cgccacccgg gcgctctact tcgggcggat cggccggaac gcacgggagt
      661 tccggatctt cgccggcagc accgacctca tccggggcaa cacctcgggg tcgtaccgcc
      721 ggaacgagtg cctcaacgcc gacgacccca acgccgagac cggctgctcc gagctcgacc
      781 ggctggtcgg cacccagatc ggcgtggcat cggccgagct ccggattccg gtgctgaacc
      841 cgtcgtacgg caccccggct gccatcccgc cgctggagct ggccctgttc tacgacatcg
      901 ggctggcctg ggatgatcag agcaccctca agtggaaacg cgaggccggg gacgatccgg
      961 tcaaggtgcg caccccgctc aagaccctgg gcgtgtcgct ccggaccaac ctgttcggct
     1021 tt
//
LOCUS       DATIFF010001182         2502 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_305329, whole genome shotgun sequence.
ACCESSION   DATIFF010001182 DATIFF010000000
VERSION     DATIFF010001182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2502
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_305329"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..586)
                     /locus_tag="VLD58_17170"
     CDS             complement(<1..586)
                     /locus_tag="VLD58_17170"
                     /inference="COORDINATES: protein motif:HMM:NF013974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate dehydrogenase subunit
                     beta"
                     /protein_id="HSB56097.1"
                     /translation="MRLIQGNEACALGAIHAGCTFYAGYPITPASEIMEHMARLLPAR
                     HGVFLQMEDEIAAMAAVIGAAWGGAKAMTATSGPGFSLMQENLGYAAMTETPCVVVDS
                     QRMGPSTGLPTLPSQGDVMQARWGSHGDRAAVVLTASSVADVFEVTVTAFNLSEQLRL
                     PVVLLLDAVVSHMREGVDLPDLPVVSRRAPASLEG"
     gene            complement(577..849)
                     /locus_tag="VLD58_17175"
     CDS             complement(577..849)
                     /locus_tag="VLD58_17175"
                     /inference="COORDINATES: protein motif:HMM:NF024585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HSB56098.1"
                     /translation="MIPAPMRYAQGGMALLVYRNYCKGCNICVADCPEKILALDQHHI
                     AVVNDIGRCVFCGICAVRCPDFAIVIDRPGAHWTAPSHDPGGMACA"
     gene            complement(846..2231)
                     /locus_tag="VLD58_17180"
     CDS             complement(846..2231)
                     /locus_tag="VLD58_17180"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSB56099.1"
                     /translation="MSLAHPELLPHGILTPGGAPLFTELRPPLAEEAVAWEADRCLVC
                     GGPTAPAPCAAACPASIEVPRFIDAIAHDDWEGAAALIFGANLLGGSCARVCPTEELC
                     EGACVLATQGRRPVEIGRLQRYATDRALSNPWSTFRTAAPPTGKRIVVIGAGPAGLVC
                     AGELAILGHSVRIYEARADAGGLIRHAIAPYRLDHEPLDDEVQRILALGVELYLGCPV
                     DSPEALRRIELEADAIFLGVGMGPDVAQPYPGDHLAGVWNSLEFIEAIKLQHLTDIGR
                     RVAVIGGGNTAMDVAREAVRLGAEDVRLLYRRSEAEMPAYRFEFEGARAEGVRFEWLT
                     NPLSFVGEHRVSGVICQRMRLGEPDASGRARPVPQPGSEFLLPVDTVVRAIGQEPRLE
                     FLRWIEGLELRNGRPVVDPATGQTSHPHYFAGGDVLNGGATVVEAVRAAKLSAAGIDA
                     FLRAAECQVSS"
BASE COUNT          442 a          848 c          844 g          368 t
ORIGIN      
        1 acccctcgag cgacgccggc gcccgccggc tcacgactgg aagatcgggg aggtcgacgc
       61 cctcccgcat gtgcgagact accgcgtcga gcagcagcac caccggcagg cggagctgct
      121 cgctcaggtt gaatgcggtg acggtcacct cgaatacatc ggctaccgag gacgcggtga
      181 gcaccacggc ggcgcggtcg ccatgactgc cccagcgcgc ctgcatcacg tcgccctggg
      241 acggcagggt aggcaggccc gtgctcggcc ccatccgctg ggaatcgacc accacacaag
      301 gggtctcggt catcgcagcg tagccgagat tctcctgcat gagcgagaag cctgggccgg
      361 aggtggcggt catcgctttg gctccgcccc aggctgcgcc gatcaccgcc gccatggcgg
      421 cgatctcgtc ctccatctga agaaagacgc catgccgggc cggcagcagg cgggccatgt
      481 gctccatgat ctcagatgcc ggtgtgatcg gatacccggc gtagaaggtg cacccggcgt
      541 ggatggcgcc gagcgcacag gcctcattgc cctggatcag gcgcatgcca tgcccccggg
      601 atcgtgtgac ggtgcggtcc aatgggcgcc tggccggtcg atgacgatgg cgaagtcagg
      661 gcagcggacc gcgcagattc cgcagaagac acaacggccg atgtcgttga cgacggcgat
      721 gtggtgctgg tcgagggcga ggatcttctc gggacaatcg gccacgcaga tgttgcagcc
      781 cttgcagtag ttccggtaca ccagcagggc cataccgccc tgggcgtacc gcatcggcgc
      841 ggggatcatg agctcacctg gcactcggcc gcgcgaagga aggcgtcgat tcccgccgcg
      901 gacagcttgg cggcgcgaac cgcctcgacc acggtggccc cgccattgag gacgtccccg
      961 ccggcgaagt agtgcgggtg cgaggtctgg ccggtcgcgg gatcgacgac ggggcggcca
     1021 ttgcggagct cgagcccttc gatccaccgg aggaactcca accggggctc ctgcccgatc
     1081 gcccgaacca ccgtgtcgac cggcaggagg aattcggagc ccggttgcgg caccggccgg
     1141 gcccggccgc tcgcgtccgg ctctcccagc cgcatccgct ggcagatcac cccgctcacc
     1201 cggtgctcgc ccacgaacga cagcggattg gtcaaccatt cgaaccggac gccctcggcc
     1261 cgggctccct cgaactcgaa gcgatacgcc ggcatctccg cttcgctgcg gcggtacagg
     1321 agccgcacat cttccgcgcc cagccggacc gcttcgcggg cgacatccat cgcggtattg
     1381 ccgccgccga tcactgccac ccgccgcccg atatcggtca gatgctggag cttgatcgcc
     1441 tcgatgaact cgagcgagtt ccagactccg gccagatggt cgccagggta gggctgggcc
     1501 acgtccggac ccatgcccac gccgaggaag atggcatcgg cttccagctc gatccggcgc
     1561 aacgcttcgg gcgaatcgac cgggcagccg aggtacagct ccacgcccag tgccaggatc
     1621 cgctggacct cgtcgtcgag cggctcgtgg tcgaggcggt agggcgcgat ggcatgacgg
     1681 atcaggccac cggcatcggc gcgggcctcg tagatccgga ccgagtgacc caggatcgcc
     1741 agctctcccg cgcacaccag tccggccggc cctgcgccga tcacgacgat ccgcttgcca
     1801 gtgggcggcg ccgcggtccg gaaggtggac cacggattgc tgagcgcccg gtcggtagcg
     1861 taccgctgca accgcccgat ctccaccgga cgacggccct gggtcgcgag gacgcaggcc
     1921 ccttcacaca actcttccgt ggggcagacc cgagcgcagc tgccgcccaa caggttggcg
     1981 ccgaagatca acgccgccgc gccctcccaa tcatcatggg cgatggcatc gatgaaacgc
     2041 ggcacctcaa tggacgcggg gcaggcggca gcacagggag cgggcgccgt ggggccacca
     2101 cagaccaggc agcggtccgc ctcccaggcg actgcttctt cagcgagtgg cggccgcagc
     2161 tctgtgaaga gcggggcacc gcccggggtc aggataccgt gaggaaggag ttccgggtgg
     2221 gcgagggaca taccacctcc ggggatggct gtacccggtc cgaacgggcc gggtacgaag
     2281 ccactatgga gtgcggttcc tgaaaagagc gttaattgcg aaggagacag gtggtataag
     2341 gaatggcctc cagggggcga tgcgcaaccc aggggttgcg cttttgcggg tcgactccta
     2401 ttatgtgcaa cacgaatgtt gcatatcttt ggagcacctt tctacgcggt tacggagtga
     2461 atcacccatg gctatcaaga ccgaatcccc caacgacatg ac
//
LOCUS       DATIFF010001183         2633 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_918040, whole genome shotgun sequence.
ACCESSION   DATIFF010001183 DATIFF010000000
VERSION     DATIFF010001183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2633
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_918040"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(162..2003)
                     /locus_tag="VLD58_17185"
     CDS             complement(162..2003)
                     /locus_tag="VLD58_17185"
                     /inference="COORDINATES: protein motif:HMM:NF014679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HSB56100.1"
                     /translation="MSVGIRYIDGPRLARSFFAAADWVAAGREEINRINVFPVPDGDT
                     GTNFTLTLRAVADALRALGDAPLALTARTAARGAVLGARGNSGMMLAHFLLGFADSIG
                     DREQATAQEVAEAFRVGADRLYSSLDDPREGTILTVAREAALAAQRASADSPDISVFM
                     TRLLHEGEAALAKTPELMAALKEAGVVDAGGKGFVRMLEGVVRYIEGDPILSITLTEE
                     PADLLAPAALVEVAAERDFQYCTEVMVKGEQLPPANEVRSAIRNFGGSVQVVLAGDLL
                     KIHVHTDAPEAVFTFAARWGTLEATKAEDMRAQHRRLAHGTRRPVAIVADSSADLPDT
                     VLDRHHIALVPLQVMFGDQTFRDRVQLKGEEFYQRMRVSKVNPTTSQPTPADFVRVLR
                     DARSEADEVVAILLASRLSGTFQSGVAAGKAAGIDRVEFVDSATASLGLGLLALRGAE
                     LAESGWPAKAIADELRRVRKQSGCFITVDRFDNLLRSGRVTRGKALIAGMLDVKPILS
                     LDEQGGIIPVDRVRGRNNVVPRVLSLLDRRLSPRPATVRFGIVHAEAPEIAERMRAAL
                     VAAYRPRDCFVSLATGVLGTHVGFGAWGVFWQVEDGTPTHLAAEAKA"
     gene            complement(2014..2457)
                     /gene="rplI"
                     /locus_tag="VLD58_17190"
     CDS             complement(2014..2457)
                     /gene="rplI"
                     /locus_tag="VLD58_17190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HSB56101.1"
                     /translation="MEVILREDIKTLGKAGELVKVKPGYARNYLLPKGLAYEATEGNR
                     KRIQAESKARSAKLEQEAGEARAMAARLGAVSLTLSRKAGEGDRLFGSITAQDLADAL
                     AAQGHAVDKRKIELEHPIKTIGQHTVPVRLHPDVIAEVRVTVAAE"
BASE COUNT          419 a          916 c          898 g          400 t
ORIGIN      
        1 caccgagtcg gcgatgcccc gcacgtgagc atccgaggtg cccgaggcga tgatgaagaa
       61 gtcggtcgcc tcgctcaggc cccgcagatc gaggatccgg acctcgcgtc ccttgaggtc
      121 ctcgatcgcc gccaccgccg cattcacgcc ctcgcgcgga gtcatgcctt cgcctccgcc
      181 gccaggtggg tcggggtgcc gtcctccacc tgccagaaca cgccccaggc cccgaaccct
      241 acgtgggtcc ccagcacccc ggtcgcgagg gacacgaagc agtcgcgggg ccggtaggcg
      301 gcgaccaggg cggcccgcat ccgctcggct atctccggag cctccgcatg gacgatgccg
      361 aagcgcaccg tggcggggcg gggagagagc cgccgatcca gcaggctcag tacccggggc
      421 accacattgt tccggccccg cacccggtcc accgggatga tccctccctg ctcgtcgagc
      481 gagaggatcg gcttcacatc gagcatcccg gcgatcaggg ccttgccgcg ggtcacccgg
      541 ccggagcgga gcaggttgtc gaatcggtcg acggtgatga agcaccccga ctgcttcctg
      601 acccggcgca actcgtccgc gatcgccttt gccggccaac ctgactcggc caattcggcg
      661 cctcgcaggg cgaggaggcc cagacccaaa gacgccgtgg cactatcgac aaattccacc
      721 cggtcgattc ccgccgcctt gcccgctgcc actccggatt ggaacgtgcc ggaaagccgg
      781 gaggcgagca ggatcgccac cacttcatcg gcctcggacc gggcgtcccg gagcacccgg
      841 acgaagtcgg cgggggtggg ctgcgaggtc gtggggttca ccttcgacac ccgcatccgc
      901 tggtagaact cttccccctt gagctgtacc cggtcccgga aggtctggtc cccgaacatc
      961 acctggagcg gaaccagggc gatgtgatgc cggtccagga ccgtgtccgg gaggtcggcc
     1021 gaagagtcgg ccacgatcgc caccggacgg cgcgtgccgt gggccagccg acgatgctgg
     1081 gcccgcatat cctcggcctt ggtcgcctcg agggttcccc accgggccgc gaaagtaaag
     1141 acggcctccg gggcatcggt gtgcacatgg atcttgagga gatcacccgc gagaaccacc
     1201 tgaacggaac ccccgaaatt gcggatggcc gaccggactt cgttggccgg cggcaactgc
     1261 tcccccttaa ccataacctc ggtgcagtac tggaagtcgc gctcggcggc gacctccaca
     1321 agggcggccg gggcgaggag gtcggcgggt tcctcggtca gggtgatcga gaggatcggg
     1381 tcaccctcga tgtagcggac caccccttcc agcatccgca cgaagccctt gcctccggcg
     1441 tcgaccacgc ccgcttcttt gagcgcggcc atgagctccg gcgtcttggc cagcgcggct
     1501 tctccctcgt ggagaagccg ggtcatgaag acggagatat cgggggaatc ggccgaggcg
     1561 cgctgggccg cgagggccgc ctcgcgggct acggtgagga tggtgccttc gcgcggatcg
     1621 tcgagcgagc tgtagagccg gtcggccccg acccggaacg cttcggccac ttcctgggcg
     1681 gtcgcctgct cccggtctcc gatcgaatcg gcaaagccga ggaggaagtg ggccagcatc
     1741 atcccggagt tgccgcgggc gccgaggacc gcgccacggg ctgcggtccg ggcggtaagg
     1801 gcgaggggtg cgtcgccgag cgcccggagg gcgtcggcca cggcacggag tgtcagggtg
     1861 aagttggtgc cggtatcccc gtcgggaacg gggaagacat tgatccggtt tatttcttcc
     1921 cggccggcgg ccacccagtc tgcggcggcg aagaaggacc gcgccagccg ggggccgtcg
     1981 atataccgga tgcctacgga catgcgacgg agcttactcc gccgccaccg tcacgcgaac
     2041 ctcggcgatc acgtcgggat ggagccgcac cggcacggtg tgctggccga tggtcttgat
     2101 gggatgctcc agctcgatct tccgcttgtc gacggcgtgg ccctgcgcgg cgagcgcgtc
     2161 ggccaggtcc tgcgcggtga tcgagccgaa gagccggtcg ccctcgccgg ccttgcggct
     2221 cagcgtgagg gagacggcgc ccagcctggc ggccatggcg cgggcctcgc cggcttcctg
     2281 ctccagcttg gcgctcctgg ccttggactc ggcctggatc cgcttgcgat tgccctcggt
     2341 ggcctcgtag gccaggccct tgggcaggag gtaattccgg gcgtagcccg gcttcacctt
     2401 caccagctca cccgccttgc ccagcgtctt gatgtcttcg cggagaatga cttccatcgc
     2461 tcactccctt gtctgatcgg cgggccggaa gcgccgccgg aaatccaccc atgtatcggc
     2521 caggccgaag gcgaaccacc cgcccagcgc gaccggcaga ataaacagca tgcccacacc
     2581 caccacgatc agcacgaagg tggggaaggc ggcgatcgat ccccaggtga tcg
//
LOCUS       DATIFF010001184         4144 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_611778, whole genome shotgun sequence.
ACCESSION   DATIFF010001184 DATIFF010000000
VERSION     DATIFF010001184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 4144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4144
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_611778"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1980
                     /gene="ligA"
                     /locus_tag="VLD58_17195"
     CDS             <1..1980
                     /gene="ligA"
                     /locus_tag="VLD58_17195"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF005932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HSB56102.1"
                     /translation="ELRALIDRANRAYYVLDTPEVSDAEYDRWMVELKALEDKHPELR
                     TPDSPTQRVGAEPSSALAKHTHRRPMLSLANAFSPEELQAWEDRNARITQDVRRAGYT
                     TEVKIDGSAVSLTYEKGRFVAGATRGNGAMGEMITENLKTIQDVPLILAGGPHPRLME
                     IRGEVYMTHAAFTRLNRERETAGEPLYANPRNTAAGSLKLLDPRITRDRRLRMFAFHI
                     EVIEGHLGATRQSELLTLLGKWGFQVEPHHKRHQDLAAVQEAIQAFEEKLAELPFDAD
                     GVVVKVDQLALHDELGVVGEREPRWAIARKFAPDVAVTRLKQIAINVGRTGALNPYAI
                     LEPVEIGGVTVSNATLHNEDLIAEKDLREGDQVEVIRAGEVIPQILRSVPSTDGERGP
                     PFVMPDHCPACNTRVQRPDGEAMRYCPNGSCPGRILEGIVHFASRDAMDIRGLGYERV
                     RQLLEAKLIESVADLYDLTVDQLTGLERFAEQSASQLVAAIEDSKARPLALLLFGLGI
                     RHVGKTVAQILARRFGSMDALAAATRDEIEAVPGVGPIIAEAVEEYFHTASNRKLIAR
                     LSKAGLTLTEASAVRGDGPLAGKTYVITGTLPTLSRQQATELIEQAGGRVAGSVSKKT
                     DAVVAGEEAGSKLEKARALGVEVIDEDELRRRVGG"
     gene            2225..2788
                     /locus_tag="VLD58_17200"
     CDS             2225..2788
                     /locus_tag="VLD58_17200"
                     /inference="COORDINATES: protein motif:HMM:NF014845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-vinyl reductase"
                     /protein_id="HSB56103.1"
                     /translation="MPTTSTAAPPNTLLLSQRSIHHLRQVLERDAGMQAATWLQEAGF
                     AGGEAVFQAYTEWLNDRYSVNRPASLDVRHLGETLSSFFREYGWGTVRVSPIASAVIA
                     LDSTDWWEAEPAIGAAYPSCHLSSGLLAEFLSRVSEATLGVMEVECRSRGDARCRFLA
                     GAPESLQLLYERMAEGTSYLQALGVES"
     gene            2804..2962
                     /locus_tag="VLD58_17205"
     CDS             2804..2962
                     /locus_tag="VLD58_17205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56104.1"
                     /translation="MCAYNVRQNKSVDHDPATGHARKVNLLREAGVWALGLASMGLVY
                     WLVRRYLL"
     gene            complement(2959..>4144)
                     /locus_tag="VLD58_17210"
     CDS             complement(2959..>4144)
                     /locus_tag="VLD58_17210"
                     /inference="COORDINATES: protein motif:HMM:NF039907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HSB56105.1"
                     /translation="SARVSRTQGVNLRVVAEGRMGFAGTVGDDASEILENALTSARHG
                     EAASVTLPKPAAEIPRVFTHAPRAATATLHELMALATMVRDRLAAERADLTITVERSI
                     GTVRVANTRGVDAGYDVTLVTLSLEAARVREGRRLVTGGRISGVDLPSLGEIEALVTR
                     VRQRLGWAEREAKASAGRQQVGFLPTAVPLLLHPLEQALLGKTVIQGSSPLGRRKGAK
                     VYSELFTLSDNPLLDGRPGSRPVDDEGVVSRAVPLVQAGRVEGFLYDLETATRVGVPP
                     TGHGRRTTFAKPQPACTNLIVEPGAASFEELLQAVGDGILLEETRGGQVGNAAGGTFA
                     HTAALAWKVEGGEVTGLAQELTVAGNAHDLLGRVTAVGADPLWIGPRSMPALVVEGVS
                     VF"
BASE COUNT          677 a         1417 c         1428 g          622 t
ORIGIN      
        1 gaactccgcg ccctcatcga ccgcgccaac cgggcctact acgtgctcga cacgcccgag
       61 gtctccgacg ccgagtacga ccgctggatg gtcgaactca aggcgctgga ggacaagcac
      121 cccgagcttc gcacccccga cagccccacc cagcgggtgg gcgccgagcc cagctcggca
      181 ctggccaagc acacccatcg ccggccgatg ctctcgcttg ccaacgcctt cagccccgag
      241 gagctgcagg catgggagga ccggaacgcc cgcatcaccc aggatgtccg ccgcgccggc
      301 tacaccaccg aggtgaagat cgacggctcg gcggtgagcc tgacctatga gaagggacgg
      361 ttcgtcgccg gcgccacgcg tggcaacggc gccatgggcg aaatgatcac cgagaatctc
      421 aagacgatcc aggatgtacc cctgatcctg gccggcggcc cacatcctcg gctgatggaa
      481 atccggggcg aggtgtacat gacccacgcg gcgttcaccc ggctcaaccg ggagcgcgag
      541 accgcgggcg aaccgctcta tgccaatccc cggaataccg ccgcgggaag tctcaagctg
      601 ctggacccgc ggatcacccg cgaccggcgc ctgcggatgt tcgccttcca catcgaggtc
      661 atcgagggcc acctcggagc cacccgtcag tccgaactgc tcacgctgct cggcaagtgg
      721 gggttccagg tcgagccgca tcacaagagg caccaggacc tggccgcggt gcaggaggcg
      781 atccaggcgt tcgaggagaa gctggccgaa ctgccgttcg acgccgacgg ggtggtagtg
      841 aaggtggacc agctggcgct ccacgacgag ctgggggtgg tgggtgaacg ggagccgcgc
      901 tgggccatcg cccggaagtt cgcccccgat gtcgcggtca cccggctcaa gcagatcgcg
      961 atcaacgtgg gccgtaccgg cgcgctcaat ccctatgcga tcctcgagcc ggtggagatc
     1021 gggggtgtca ccgtctccaa cgccacactt cacaacgagg acctgatcgc ggagaaggac
     1081 ctgcgcgaag gagaccaggt cgaggtgatc cgggcgggcg aggtgattcc ccagattctc
     1141 cgttcggtgc cctcgaccga tggcgagcgg ggcccgccat tcgtgatgcc cgaccactgc
     1201 cccgcctgca acacccgggt ccagcggccc gacggcgaag ccatgcggta ctgccccaac
     1261 ggctcctgcc ccggccggat tctcgagggc atcgtgcact tcgcctcgcg cgacgcgatg
     1321 gacatccggg ggctgggata cgagcgggtg cggcagctgc tggaggcgaa gctgatcgag
     1381 agtgtggccg atctctacga cctcaccgtg gatcagctca ccggcctcga gcggtttgcg
     1441 gaacaatccg cgagtcagct ggtggcggcc atcgaggact ccaaggccag gccgttggcg
     1501 ctgctcctgt tcggcctcgg gatccggcac gtcgggaaga cagtcgccca gatcctggcg
     1561 cggcggttcg gctccatgga cgcgctggcc gccgcgaccc gggacgagat cgaggcggtg
     1621 ccgggcgtgg gaccgatcat cgcggaggcc gtcgaggagt acttccacac ggcgtcgaac
     1681 cggaagctga tcgccaggct gagcaaggcg gggctaacgc tgaccgaggc gagtgcggtc
     1741 cggggcgatg ggccgctcgc cgggaaaacc tacgtgatca ccgggacgct cccgaccctg
     1801 agccggcagc aggcaaccga gctgatcgag caggccggag gccgggtggc gggaagcgtg
     1861 agcaagaaga ccgacgcggt ggtggcaggc gaggaggcgg ggagcaagct ggagaaggcg
     1921 cgggcgctgg gggtggaggt gatcgacgag gatgaactgc ggcgtcgggt cgggggctag
     1981 tggcttgggg cttggggctt gtggtcgggc gtccagggcg agaaatggcg cgcgaggagt
     2041 ggggggtgag gagtggcggc gcggaggccg tcatcccgag gtcgcatttg cgaccgaggg
     2101 atccagcttg ggcaggccag atccctcgct gcgctcggga tgacgacatc cgccttcccg
     2161 ctttgccgcc ttgccgcctg ccaagccccg gtctagcatt cggcatctcc agcgagccta
     2221 ctccatgcca actacctcga cggccgcacc gcccaacacc ctcctcctga gccagcgcag
     2281 catccatcac ctgcgacagg tgctggagcg cgatgccggc atgcaggccg cgacctggct
     2341 ccaggaagcc ggattcgccg gcggcgaggc ggtgttccag gcctacaccg agtggctcaa
     2401 cgaccgctac agcgtgaacc gccccgcctc acttgatgtg cggcacctgg gcgagacgct
     2461 gtcgagcttc ttccgcgaat acggttgggg tacggtacgg gtctcgccga tcgcgtcggc
     2521 agtgatcgcc ctcgactcca ccgactggtg ggaagccgaa ccggccatcg gcgccgcgta
     2581 tccttcctgc cacctgtcct cggggcttct cgccgagttc ctgagccggg tctcggaagc
     2641 gacgctcggg gtgatggagg tggagtgccg ctcccgcggc gatgcccgct gccggttcct
     2701 ggccggggcg cccgagtcgc tccaactcct ctacgagagg atggcggagg gaaccagcta
     2761 tctccaggcg ctcggagtcg aatcctgatc gcgatcgcgc ccgatgtgcg cctataatgt
     2821 tcgccagaac aagtctgttg atcatgaccc ggccacgggt catgcgcgca aggtgaatct
     2881 cctccgggag gccggggtct gggcgctcgg gctggcgtcg atggggctgg tgtactggct
     2941 ggtgcggcga tacctgctct agaagaccga gactccttcc accaccaggg caggcatcga
     3001 acgggggccg atccagagcg gatcggcccc tactgctgtc acccgtccca acaggtcgtg
     3061 ggcattgccg gcaactgtga gttcctgggc caggccggtc acttctcccc cctcgacctt
     3121 ccaggccagc gccgccgtgt gcgcgaaggt cccgccggcg gcattcccga cctggccgcc
     3181 ccgggtttcc tccagcagga tgccgtcacc taccgcttgc agcagttcct cgaagctcgc
     3241 ggcgccaggc tcgacaatga ggttggtgca agccggttgt ggcttggcga aggtggtccg
     3301 gcgaccatgg cccgtcggag gaacgccgac ccgagtcgcg gtctccaggt catagaggaa
     3361 gccctccacc cgccccgcct ggaccagcgg caccgcccgg ctcaccacac cctcgtcatc
     3421 caccggccgt gatcccggcc gcccatcgag gagcggattg tcgctcagtg tgaacagctc
     3481 gctgtagacc ttggccccct tccggcggcc cagcggggaa ctcccctgta tcaccgtctt
     3541 cccgagcaac gcctgctcca gcggatgcag caggagaggc accgcggtcg ggaggaaccc
     3601 cacctgttgc cgtcccgcgg aggcctttgc ctcccgttcg gcccagccga gtcgctgccg
     3661 cacccgtgtc accagggcct cgatctcgcc cagcgagggg agatcgacac cggagatgcg
     3721 gccgccggtc accagtcgcc ggccttcacg cacccgcgcg gcctcgaggc tcaaggtgac
     3781 gagcgtcacg tcatagccgg catcgactcc gcgcgtattc gcgacccgga ccgtcccgat
     3841 gctccgctcg accgtgatcg tgaggtcggc tcgttccgcc gccagacggt cgcggaccat
     3901 ggtcgcgagt gccatgagct catggagcgt cgcggtggcg gccctgggcg cgtgagtgaa
     3961 gacgcgcggg atctccgcgg caggtttcgg gagcgtgacc gaagcggcct cgccgtgccg
     4021 ggccgacgtg agggcgttct cgaggatctc gctggcgtcg tctcccaccg tgccggcaaa
     4081 gcccatccgc ccctcggcca cgacccggag attcacgccc tgggtgcggc tcacgcgggc
     4141 ggag
//
LOCUS       DATIFF010001185         3917 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_151038, whole genome shotgun sequence.
ACCESSION   DATIFF010001185 DATIFF010000000
VERSION     DATIFF010001185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3917
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151038"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..574)
                     /gene="tsaB"
                     /locus_tag="VLD58_17215"
     CDS             complement(<1..574)
                     /gene="tsaB"
                     /locus_tag="VLD58_17215"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:TIGR03725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HSB56106.1"
                     /translation="MWLALDTATDRATLAVGMPGRILAHETIVGARNHAAALLPALAA
                     CLTRAELGREQIEGIALADGPGSFTGLRVSAALVKALVRVRRVPVWSAPSLLVCAAAR
                     LENGVVLSVSNALRGELFAAAYAFHPGRVETVLAPTVITPKDLALKVPKPARIVGPAA
                     PTLGAEPTWPDAADLLGLIGLAGGVRAVEDV"
     gene            complement(574..987)
                     /gene="tsaE"
                     /locus_tag="VLD58_17220"
     CDS             complement(574..987)
                     /gene="tsaE"
                     /locus_tag="VLD58_17220"
                     /inference="COORDINATES: protein motif:HMM:NF014426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HSB56107.1"
                     /translation="MIRPLTEPELIHEGETLGRTLPPRSLVALEGELGAGKTTFVKAL
                     ARGLGVTDAATSPTYALVHRYQGRRGPVFHLDCYRLRRPEEAEDLDWESLLAEGDAVL
                     VEWPEKAGAWLPPPSHRFRLHHLPDENRRGLEALG"
     gene            complement(984..3059)
                     /gene="uvrB"
                     /locus_tag="VLD58_17225"
     CDS             complement(984..3059)
                     /gene="uvrB"
                     /locus_tag="VLD58_17225"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HSB56108.1"
                     /translation="MPSPAFEVLAPFDPAGDQPRAIAELSAGLSRGEKYQTLLGVTGS
                     GKTMTLAHTIARYGKPTLVLSHNKTLAAQLYGELRQFLPNNAVEYFVSYYDYYQPEAY
                     VPSTDVYIEKDASINADIESLRLRATSSLMEREDVVIVATVSAIYGLGDPVEYRKLLV
                     TAERGESKGRDSLLSDLVRIQYGRNDVSFEQGTFRVRGDTVEIFPAYAEQAIRVEFWG
                     DTVERITKIDPLTGRAIAQLERCAIYPAKHFVTQRPTIERAVKLIRAELAERLAILRQ
                     AGKLLEAQRLESRTTFDVEMLLEVGTCAGIENYSRHFSGRAEGERPACLLDYFPPEFL
                     VVVDESHVSLPQIGGMYNGDRARKETLVEYGFRLPSALDNRPLKFEEFMAIVPQMVAV
                     SATPGELELSLSQGQVVEQIIRPTGLVDPEVEIRPVRGQVDDLLGEIRERARKRERVL
                     VTTLTKRMAEDLTDYLQQTGVRVRYLHSDIDAIERMEILRGLRLGEFDVLVGINLLRE
                     GLDLPEVSLVAILDADQEGFLRSDRSLIQTVGRAARHLNGRAILYADKMTGSMERALA
                     EMTRRRDIQIAFNQEHGITPRSIIKSLEEVRLSTRVADARTEKKPEKRKEETLVELDF
                     RDPAKRAQTIAVLERQMRDAAANLEFELAAMLRDQVNELRALDAPEVARGGERASTAT
                     RAPMRRRRA"
     gene            complement(3155..3565)
                     /locus_tag="VLD58_17230"
     CDS             complement(3155..3565)
                     /locus_tag="VLD58_17230"
                     /inference="COORDINATES: protein motif:HMM:NF013995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HSB56109.1"
                     /translation="MPSYWLLKTEPTTYSFDRLVQEGQAVWDGVRNNLALKYLREMKA
                     GDQLLIYHSGADKAVVGQAKVVKAAYPDPSADDPKIVVVDLVPAGKLPKPVPLAAIKA
                     ESSLADLPLVRMPRLSVMPVPADAWKKILAMGKA"
     gene            complement(3660..>3917)
                     /locus_tag="VLD58_17235"
     CDS             complement(3660..>3917)
                     /locus_tag="VLD58_17235"
                     /inference="COORDINATES: protein motif:HMM:NF024687.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HSB56110.1"
                     /translation="GEAFAVRLAVSGEDRRGLYADVMQAISQSGTNVKAAELSTKDGT
                     VFSTIVVEVDNRTHLAKVIKSIRKVKGITDVERREGPTPNS"
BASE COUNT          613 a         1296 c         1345 g          663 t
ORIGIN      
        1 agacgtcctc cacagcccgc acaccccccg cgagcccgat caaccccagg agatccgccg
       61 catccggcca ggtcggctcg gccccgagcg tgggcgcggc cgggcccacg atccgcgccg
      121 gcttcggcac cttgagggcg aggtctttcg gcgtgatcac tgtcggcgcc agcaccgttt
      181 cgacccgacc cgggtgaaag gcgtacgcgg cggcgaacag ctcaccccga agggcgttgc
      241 tcaccgacag gactacccca ttctccagcc gcgccgcggc gcacaccagg agcgacggcg
      301 ccgaccagac ggggaccctg cgcacccgca ccagggcctt taccagcgct gcgctgaccc
      361 gaaggccagt gaagctgccg ggtccgtcgg ccagggcgat gccctcgatc tgctcccgcc
      421 caagttcggc tcgggtgagg caggccgcca gtgccggaag cagggccgcg gcgtgattcc
      481 gggcgcccac aatggtctcg tgcgcgagga tccggccggg catgccgacg gcgagagtgg
      541 cgcggtcggt cgcggtatcg agcgcgagcc acatcagccg agcgcctcca ggccgcgtcg
      601 gttctcatcc ggcaggtgat gcagtcggaa ccgatgcgat ggcgggggca accaggcccc
      661 cgccttttcc ggccactcca ccagcaccgc gtcgccctcg gcgaggagcg actcccagtc
      721 gaggtcttcc gcctcctcgg gccggcgcaa ccggtaacag tcgagatgaa acaccgggcc
      781 ccgtcgcccc tggtaacggt gcaccagggc gtaagtcggc gatgtggcgg cgtcggtgac
      841 gcccagtccg cgtgccagcg ccttcacgaa cgtggtcttc ccggcgccga gctcgccttc
      901 cagcgccacc aggctgcggg gcggcagggt gcggccgagc gtttcgcctt catggatcag
      961 ctcgggttca gtaagcggcc ggatcatgcc cgccggcggc gcatcggtgc ccgggtcgcg
     1021 gtggatgcgc gctctccgcc ccgagccacc tccggcgcgt cgagggcgcg gagctcgttg
     1081 acctggtcac gcagcatggc cgccagctcg aactcgaggt tggccgcggc atcccgcatc
     1141 tggcgctcga ggaccgcgat ggtctgggcc cgtttggccg ggtcgcggaa atcgagttcg
     1201 accagggtct cctctttccg cttttccggc ttcttctcgg tacgggcatc ggccacgcgg
     1261 gtgctgagcc gcacctcttc cagcgacttg atgatggagc ggggcgtgat cccgtgctcc
     1321 tggttgaagg cgatctggat atcgcgccgc cgggtcattt cggcgagggc ccgctccatc
     1381 gatccggtca tcttgtcggc gtagaggatg gcgcggccat tcaggtgccg ggccgcacgc
     1441 cccaccgtct ggatcaggga gcggtcggag cggagaaagc cttcctggtc ggcatcgaga
     1501 atcgcgacca gcgaaacttc ggggaggtcg agaccttcgc gcaggaggtt gatccccacc
     1561 agcacgtcga attcgccgag cctgaggccc cgcaggatct ccatccgctc gatggcatcg
     1621 atgtccgagt ggagatagcg gacccggacg ccggtctgct gcagatagtc ggtcagatcc
     1681 tcggccatcc gcttggtcag ggtggtgacc agcacccgct cccgcttcct ggcgcgctcg
     1741 cgaatctcgc cgaggaggtc gtccacctgg ccccggacgg ggcggatctc gacctcgggg
     1801 tccaccaggc ccgtggggcg gatgatctgc tccaccacct ggccctggct caatgacagc
     1861 tccagttcgc ccggggtggc ggagacggcc accatctgcg gcacgattgc catgaactct
     1921 tcgaacttga gcgggcgatt gtcgagcgcg ctgggcagac ggaagccgta ctcgaccagg
     1981 gtctccttgc gggcgcggtc accgttgtac atgccgccga tctgcggcag gctcacgtgg
     2041 gactcgtcga ccaccaccag aaactcgggc gggaaatagt cgaggagaca ggcggggcgc
     2101 tcaccctcgg cccggccgga gaagtgccgc gagtagttct cgatcccggc gcaggtcccc
     2161 acctcgagca gcatctcgac atcgaaggtg gtgcgggact cgagccgttg ggcctcgagc
     2221 agcttccccg cctggcgcag gatggcaagc cgctcggcca gctcggcccg gatcagcttc
     2281 accgcccgtt cgatggtggg ccgctgggtg acgaagtgct tggccgggta gatggcgcag
     2341 cgctccagct gggcgatggc ccggccggtg aggggatcga tcttggtgat ccgctccacc
     2401 gtgtcgcccc agaactccac ccggatggcc tgctcggcgt aggccgggaa gatctcgacc
     2461 gtgtcgcccc gcacccggaa ggtgccctgc tcgaacgaca cgtcgttgcg gccgtactgg
     2521 atccgcacca ggtcggagag gagactgtcg cggcctttcg actcgcctcg ctcggcggtg
     2581 acgagaagct tgcggtattc gaccgggtca ccgagaccat agatggcact gaccgtggcc
     2641 acgatcacca cgtcttcgcg ttccatcagg ctcgaggtgg cgcgaagccg gagactctcg
     2701 atgtcggcgt tgatcgaggc gtccttctcg atgtagacgt cggtcgaggg gacgtaggcc
     2761 tcgggctggt agtagtcgta gtacgagacg aagtactcga ccgcgttgtt ggggaggaac
     2821 tggcggagct cgccgtacag ctgggccgcc agggtcttgt tgtgggacag gaccagggtc
     2881 ggcttgccgt agcgcgcgat ggtgtgcgcc agggtcatgg tcttgccaga cccggtgacg
     2941 cccagcaggg tctggtactt ctcgccccgg gaaaggccgg cggagagctc ggcaatggct
     3001 cggggctgat cgccagcagg atcgaacggg gcgaggactt cgaaggcagg gctcggcatg
     3061 ggcctgcaat ctactactga cggtgtttct tcgggagccg tggctggctt gcggcttggg
     3121 gctggaggct tcaagccccc gaccccacgc ccccttaggc cttccccatc gcgaggatct
     3181 tcttccaggc atccgccggc accggcatga cggagaggcg aggcatccgg accagaggca
     3241 ggtcagcgag ggaggactcg gccttgatcg cggcgagcgg caccggcttg gggagttttc
     3301 cggcagggac caggtcgacg acaacgatct tggggtcatc cgccgagggg tcagggtatg
     3361 cggcctttac aaccttggcc tggcccacca cggccttgtc cgcgcccgag tgatagatca
     3421 agagttgatc gcccgccttc atttcacgca ggtacttgag cgccaagttg ttacggaccc
     3481 cgtcccagac ggcctggcct tcctgcacca ggcggtcgaa cgaataagtc gttggttcag
     3541 tcttgagcag ccaatagctg ggcatcgttg ggctttatgt aacggagggg caaaacgata
     3601 cccccggcgg cagccgagtc aatccggcgc ccgggggttg ttacaaaggg ccagtgacgt
     3661 caggagttgg gagtgggacc ttcccgccgc tcgacgtcgg taatgccttt caccttacgg
     3721 atggacttga tcaccttggc gaggtgggtc cggttgtcga cctccaccac gatggtgctg
     3781 aagacggtgc cgtccttggt gctgagctcc gcggccttca cgttggtgcc cgactggctg
     3841 attgcctgca tcacgtcggc atagagtcca cggcggtctt cgccgctcac cgccagccgc
     3901 acggcgaacg cctcgcc
//
LOCUS       DATIFF010001186         1120 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1229616, whole genome shotgun sequence.
ACCESSION   DATIFF010001186 DATIFF010000000
VERSION     DATIFF010001186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1229616"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1120)
                     /locus_tag="VLD58_17240"
     CDS             complement(<1..>1120)
                     /locus_tag="VLD58_17240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase"
                     /protein_id="HSB56111.1"
                     /translation="DQGAIVTRNARADDPRDVTWSSWLNQPTAQMYHIAVDYRFPYWV
                     HGAQQDSGSVAVCSRGKFGEISTRDWEPIGGGGESGYTAGDPLHPGIIYGGTGSRFDL
                     ALNRTLPGTAQPRGPETGRSDWTQPLVLSPADPKALYYANQYLFKSTDSAQSWTRISN
                     DLTRPDPGIPGNLDAAAAAQVDRNGKRGVIYAIAPSPLLIPMVWVGTDDGLVHLTTDD
                     GGTWRDVTPSAVTAWSRVTMIEASHFDYQSAYVSVDRHQLQDFEPYIYRTRDQGRSWQ
                     PIVTGLPAGVYVHTVREDPSRRGLLFAGTERGAWVSFDDGDHWQPLQQNLPVTSVRDF
                     VIYNNDLIVGTHGRGIWVIDDISALRQLTDEVVGSEAWL"
BASE COUNT          156 a          362 c          412 g          190 t
ORIGIN      
        1 acagccaggc ctccgacccg acgacttcat cggtgagctg gcggagggcg ctgatgtcgt
       61 cgatgaccca gatgccccga ccgtgggttc ccacgatcag gtcattgttg tagatgacga
      121 agtcccgcac cgaggtcacc gggagattct gctggagcgg ctgccagtga tccccgtcgt
      181 cgaaggaaac ccaggcgccg cgctcggtgc ccgcgaagag gaggccccgc cgggaagggt
      241 cttccctgac cgtatgcacg tacacgccgg cgggcagccc cgtgacgatc ggctgccagc
      301 tccggccctg gtccctggtg cggtagatgt acggctcgaa gtcctgcagc tggtgccggt
      361 ccacgctgac gtaggcgctc tgatagtcga agtgggaggc ctcgatcatc gtcactctgc
      421 tccaggccgt cacggcggac ggggtcacgt cccgccaggt gccgccgtcg tcggtggtga
      481 ggtgcacgag gccgtcgtcg gtgcccaccc acaccatcgg aatcaggagc ggtgacgggg
      541 cgatggcgta gatgacgccg cgcttcccgt tccggtccac ctgcgcggcg gcggcggcat
      601 cgaggttccc ggggatgccc gggtcgggcc gggtgaggtc gttgctgatc cgggtccagc
      661 tctgtgccga gtcggtggac ttgaacaggt actgattggc gtagtagagc gctttcggat
      721 cggccggcga gagaaccagc ggctgggtcc agtcgctccg cccggtttcc ggcccgcgag
      781 gctgcgcggt gccggggagg gtccggttga gcgcgaggtc gaaccggctt cccgtcccgc
      841 cgtagatgat gccgggatgc agcgggtcgc cggcggtgta tccgctttcg ccgcccccgc
      901 cgatcggctc ccagtcgcgc gtggagatct cgccgaactt gccgcgggag cagaccgcca
      961 ccgagccgct gtcctgctgc gccccgtgca cccagtaggg gaagcggtag tccaccgcga
     1021 tgtggtacat ctgggccgtg ggctggttga gccaggagct ccaggtgacg tcgcgcgggt
     1081 cgtcggcgcg ggcattgcgg gtgacgatcg cgccctggtc
//
LOCUS       DATIFF010001187         3991 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_151658, whole genome shotgun sequence.
ACCESSION   DATIFF010001187 DATIFF010000000
VERSION     DATIFF010001187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3991
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151658"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..526
                     /locus_tag="VLD58_17245"
     CDS             <1..526
                     /locus_tag="VLD58_17245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HSB56112.1"
                     /translation="DVRTIMQNGGSALMGTGVGRGENRAMESAQQAISSPLLDNVSIA
                     GANGVLINITGGNDLTLGEATTINDIIHDAVGDEAEIIFGAATDPSMQGEVRVTVIAT
                     GFDRVAEQPVTPVQPAKPAGVINFPTGKRVTSPQAQPQAQQPAQPSRPDKRGSGPGEV
                     PEMEIPTFIRRQMD"
     gene            656..1951
                     /locus_tag="VLD58_17250"
     CDS             656..1951
                     /locus_tag="VLD58_17250"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HSB56113.1"
                     /translation="MRGSFLRSAFALIGSAAVLTGAGFFSLRGSWPWKVEPVRPVTVQ
                     ELFSQTQDTLRRGETLSQLFIRNGFNGFQMSPSATAGIFEPRRLRPGLVFSFLRRTTD
                     TIPTKVVVRLGPEQRVALHLVNDGWWPEAEPVMWRAEPVTLSGRITTSLYDALDEEVS
                     DSLLSLPDRIRLAWDLADIFAWQVDFSRDIRPGDHFRVLAERLISEEGEVRYGRVLAG
                     DLAIGGASYDAYRFPGLDGTSSFYDGQGRSLRRAFLLAPVSFRRISSGFNRARLHPIL
                     GIVRKHEGMDFAADPGTPVMAAGDGVVTRDEWTGGYGNLVEIRHANGIVTRYGHLRDY
                     AEGLSVGKHVSQGDVIGHVGSTGLATGPHLHYEFRVNGVSVDPHSADLGTGDPVPADR
                     LRDFERERARLDAQLLWPEGPVPALAGSFTAPASSSAIN"
     gene            1978..2694
                     /gene="hisA"
                     /locus_tag="VLD58_17255"
     CDS             1978..2694
                     /gene="hisA"
                     /locus_tag="VLD58_17255"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR00007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HSB56114.1"
                     /translation="MDLFPAIDIRGGRVVRLAQGEAGRETRYHDDPVAQAEEFLAAGA
                     RWIHVVDLDRAFGSGDNLAPIRAIASRLGTKVQIQVGGGIRSIEALTAVLDLGVTRAV
                     LGTAAVTDPALVPTAIRQAGADRLVIGLDAKNGMVTIRGWVETTDLGVEEVCRRVLNE
                     GARTVVYTDVSRDGMLTGPDIEGAKFLAAMGASVIASGGVSSLEDLRAVREANLAGAI
                     VGRALYEGKFSLIQALESIQ"
     gene            2813..>3991
                     /locus_tag="VLD58_17260"
     CDS             2813..>3991
                     /locus_tag="VLD58_17260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56115.1"
                     /translation="MRLTLVVLAAAALAWFTYWRLEQLGKRAWVAALCRATAWAALGV
                     LLLDLTCAVKPGAGSRPLVLLDGSLSMNAAGGRWQEALDSARSWGEVRLFGDTRAAAD
                     TLPVLGRSELSPAIAAAAASDRRVIVVTDGELDDAADLAPEALARVAVRLFPRAAGAD
                     LAVQRVRGPDRVTTGDTVRLEAEVRAFASQADSARLEVRLDQRVLARRALRLGSDGVG
                     TAVLAFPTTGLAGDLVFRVSLTGAADREPRDDAQLWRIRVTPTPGVVVVASPPDWDAR
                     FLFRTIREVGQLPVRGYARFAPGGWHSMESLKPVPAEEVTQAVRRADVLVVKGRPPEG
                     SRESRARGRWLWPSGEGGETLVPGEWYVSAPTASPVAGAFVGQPVDSFPPLLQITPIE
                     P"
BASE COUNT          570 a         1373 c         1383 g          665 t
ORIGIN      
        1 cgacgtccgt accatcatgc agaacggcgg ctcggccctc atggggaccg gcgtgggccg
       61 gggcgagaac cgggctatgg agtcggctca gcaggcgatc tcgagcccgc tgctcgacaa
      121 cgtctcgatc gccggcgcca acggggtgct gatcaacatc accggcggca acgatctcac
      181 cctgggcgaa gcgaccacca tcaacgacat catccacgac gcggtgggcg acgaagccga
      241 gatcatcttc ggcgccgcga ccgatccttc gatgcagggc gaggtccggg tcacggtcat
      301 cgcgacgggc ttcgatcggg tggcggagca gccggtgacg ccggtccagc ccgccaagcc
      361 ggcgggagtc atcaacttcc ccaccggcaa acgggtgaca tcgccccagg cccagccgca
      421 ggcccagcag cccgcgcagc cctcgcgtcc ggacaagcgc gggtcgggtc cgggtgaagt
      481 gccggagatg gagatcccga cgttcatccg ccggcagatg gactgagctc gtgttaatga
      541 agagctcacc acagaggcac agaggacaca gagaactgca agagaggtcc atcatgaccc
      601 tctcccgctt ttctccgtgt tctctgtgcc tctgtggtga acagcggtgc ctgtaatgcg
      661 ggggtctttc ctgaggagtg ccttcgcgct gatcggctcg gcggctgtcc tcacgggcgc
      721 cgggtttttc tcgctgcgcg gcagctggcc ctggaaggtc gagccggtgc ggccggtgac
      781 ggtgcaggag ctcttcagcc agacccagga taccctccgc aggggcgaga ccctctccca
      841 gctcttcatc cggaacgggt tcaacggttt ccagatgagc ccgagtgcca ccgccggcat
      901 cttcgagcca cggcgcctcc gcccagggct ggtcttcagc ttcctccgtc gtacgaccga
      961 caccatcccg accaaggtcg tcgttcgcct ggggcccgag cagcgggtgg ccctgcatct
     1021 cgtgaacgat ggctggtggc ccgaggcgga gccggtgatg tggcgggccg agccggtgac
     1081 gctctcgggg cggatcacca cgtcgctgta cgacgcgctc gatgaggaag taagcgactc
     1141 cctcctctcg ctccccgacc gcattcggct ggcgtgggac ctcgccgaca tcttcgcctg
     1201 gcaggtcgat ttcagccgcg acattcgccc cggcgaccac ttccgggtcc tggccgagcg
     1261 cctcatctcg gaagagggcg aagtgcgcta cgggcgggtg ctggccggtg atctcgcgat
     1321 cgggggggcg tcgtacgacg cctatcgttt cccgggcctc gatggcacct caagcttcta
     1381 cgacggacaa ggccgctccc tccgccgggc cttcctcctc gcaccggtct ccttccgtcg
     1441 catttcctcc ggcttcaacc gggcccggct ccatccgatc ctcggcatcg tgcggaagca
     1501 tgaggggatg gatttcgccg ccgatccggg gacgccggtc atggccgccg gcgacggtgt
     1561 cgtgacgcgg gacgaatgga ccggcggcta cggcaacctc gtcgagatcc gtcacgccaa
     1621 cggtatagtc acccgttatg gtcacctgcg tgactacgcc gagggtctct cggtcggcaa
     1681 gcatgtgtcg cagggcgacg tcatcggcca tgtgggctcg accggcctcg cgaccggccc
     1741 ccatctgcac tacgagttcc gggtgaacgg tgtctcggtc gatccgcaca gcgccgatct
     1801 cggcaccggc gaccccgtgc ccgctgaccg cctgcgtgac ttcgagcgtg agcgggcccg
     1861 gctcgatgcc cagcttctct ggcccgaagg gccggtgccg gcgctggcgg gctcctttac
     1921 cgcgcccgct tcctcttccg cgatcaactg accgggcccg cccggttccc gtcgtccgtg
     1981 gatctctttc ccgcgattga tatccgtggt ggccgtgtcg tgcggctggc gcagggtgag
     2041 gccggccgcg aaacccgcta ccatgatgat cccgtagcac aggcagaaga gttcctcgcc
     2101 gccggagccc ggtggattca cgtggtcgat ctcgaccgcg ccttcgggtc tggggacaat
     2161 cttgcgccga tccgggccat cgcgtcgcgt ctcggaacga aggtgcagat ccaggtgggt
     2221 ggcggcatcc gctcgatcga ggcgctcacc gccgtgctcg acctgggcgt cactcgcgcc
     2281 gtgcttggca ctgccgccgt gacggacccg gccctggtgc cgacggcgat ccggcaggcc
     2341 ggcgccgatc ggctggtcat cggcctcgac gcgaagaatg ggatggtgac gatccgggga
     2401 tgggtcgaga ctaccgacct cggcgtggag gaggtctgcc gccgggtctt gaacgaaggt
     2461 gcgcggacgg tggtgtatac cgacgtctcg cgcgacggga tgctgaccgg tcccgatatc
     2521 gagggggcga agtttctggc cgccatgggc gcatcggtga tcgcgagtgg aggcgtctcg
     2581 tcactcgagg atctgcgggc ggtgcgggag gcgaacctgg cgggcgccat cgtgggccgg
     2641 gcgctgtatg agggcaaatt ctctctgatc caggcactcg aatcgatcca atgatcgcag
     2701 ttcaccacag agacacagag gacacagaga acggcgggag gatagagaca ttgtcctccc
     2761 gttcttctct gtgttctctg tgcctctgtg gtaaagggtt gaagggggtt gggtgcgact
     2821 gacgctggtc gtcctcgccg ccgcggcgct cgcctggttc acctactggc ggctggagca
     2881 actcgggaaa cgcgcctggg tcgccgcgct ctgccgcgcc accgcgtggg ccgcgctcgg
     2941 cgtcctcctc ctcgatctca cctgtgccgt gaagcccggc gccggcagcc ggccactggt
     3001 gctgctcgac ggcagcctct ccatgaatgc cgccggcggg cgctggcagg aggcactcga
     3061 ctcggcccgg agctggggcg aggtccgcct ctttggcgac acccgcgccg ccgccgacac
     3121 cctgccggtg ctgggccgct ccgaactctc acccgccata gccgcggccg cagccagcga
     3181 tcgccgagtc atcgtcgtca ccgacggtga gctcgatgac gcggcggatc tcgctcccga
     3241 agcgctggcg cgggtagcgg tacggctgtt tccccgcgcc gccggcgccg acctggcggt
     3301 ccagcgggtg cgggggcccg accgggtcac caccggtgac accgttcgcc tcgaggcgga
     3361 ggtccgcgcc tttgcgagtc aggccgacag cgcccggctc gaggtccggc tggatcagcg
     3421 ggtcctggcg cgccgggcac tccggctcgg cagcgacgga gtcgggacgg cggtgctcgc
     3481 ctttcccacg acgggcctgg cgggcgacct cgtcttccgc gtgagcctga cgggcgccgc
     3541 cgaccgcgag ccccgcgacg acgcccagct ctggcggatc agggtgactc cgacgcccgg
     3601 ggtcgtcgtg gtcgcgagcc cgccggactg ggatgcgcgc ttcctcttcc ggaccatccg
     3661 cgaagtcggc cagctcccgg tacgcggcta tgcccgtttt gcgcctggcg gatggcactc
     3721 gatggagtcg ctcaagccgg tccccgcgga agaagtgacc caggcggtgc gccgggccga
     3781 tgtgctggtg gtgaagggca gaccgcccga agggtcccgg gagtcgcgag cccggggccg
     3841 gtggctctgg cccagcggcg aagggggcga gaccctcgtc cccggtgagt ggtatgtgtc
     3901 cgcaccgacc gcgtcacccg tggcgggcgc cttcgtcggc cagccggtcg acagctttcc
     3961 gccgctgctg cagatcactc ccatcgagcc c
//
LOCUS       DATIFF010001188         2043 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_767102, whole genome shotgun sequence.
ACCESSION   DATIFF010001188 DATIFF010000000
VERSION     DATIFF010001188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_767102"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1182)
                     /locus_tag="VLD58_17265"
     CDS             complement(<1..1182)
                     /locus_tag="VLD58_17265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HSB56116.1"
                     /translation="MSERLNLPVLPLREVVLFPGVTAPIGAGRPATLRAIEAALATPD
                     RLVFAVSQRQNVESVSSDVLYTIGTIARIGQLQRGLSGMQLLLHGEKRGIAIHYSDKD
                     GYLQSVVREAEEMLPVNPEDPAFVALHREARVRAAELGQKSGLPDEVVQQVLAGVNEP
                     GRFADLVAGYIDITPAQRQVLLETLSVEERLRKVLVHVQRQIGVLDAQEDIKSQVQEE
                     LGERQREMFLREQLKTIQRELGEDDERDDLRDLKEKLAALDLPAEARKEVDRELNRLS
                     RIGRESMESQVIRTFLENIVELPWNVRSKEHLDLSEAQRILDEDHYALGDVKDRVLEF
                     LAVRQLRHQMEEEESGSATDGAERKEEEVAAGESTDVPAATATVPPANLPAPGNPDER
                     AK"
     gene            1326..>2043
                     /locus_tag="VLD58_17270"
     CDS             1326..>2043
                     /locus_tag="VLD58_17270"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB56117.1"
                     /translation="MPAVPVRMILGTIMAGIRDHSAARCHIGRREPISAEPPAGGRVA
                     VATAPVQIVCHVRLHLPRPAQLPPRPSGAPPHVTSPSEQPLPTRLAAALGDAYTIEGE
                     IGRGGMGVVYRARDERLQRRVAIKVLPPELAFQQDIRERFTREAQTAARLSHPHIVPI
                     HTVGEGYGLVYFVMGYVDGESVAARIRRRGKLPIEEARRIMAEAADALGAAHAVSIIH
                     RDIKPDNILLEGPRGRVMVTD"
BASE COUNT          289 a          744 c          668 g          342 t
ORIGIN      
        1 cttggcccgc tcgtcgggat tccccggcgc gggcaggttg gccggcggca ccgtggcggt
       61 ggcggcgggg acgtcggtgg attcaccggc ggccacctcc tcctccttcc gctcggctcc
      121 gtcggttgcg ctcccgctct cctcctcttc catctggtgc cggagctgac gcaccgccag
      181 gaactccagc acccggtcct tcacgtcgcc gagggcgtag tggtcctcgt cgaggatccg
      241 ctgggcctcc gacaggtcga ggtgctcctt gctccgcacg ttccacggca gctccacgat
      301 gttctccagg aacgtccgga tcacctgcga ctccatcgac tcccgcccga tccggctgag
      361 gcggttgagc tcgcggtcta cttccttgcg ggcctctgcc ggcaggtcga gcgctgcgag
      421 cttctccttc aggtcgcgga gatcgtcccg ctcgtcgtcc tcgcccagct cgcgctggat
      481 ggtcttgagc tgctcccgca ggaacatctc ccgctgccgc tcgcccagct cctcctggac
      541 ctgggacttg atgtcctcct gggcgtcgag cacgccgatc tggcgctgga cgtgaaccag
      601 caccttccgg agccgctcct ccacgctcag cgtctccagc agcacctggc gctgggcggg
      661 agtgatgtcg atgtaaccgg ccaccaggtc ggcgaaccgg cccggctcgt tgacgccggc
      721 cagcacctgc tgcacgacct cgtcgggcag tcccgacttc tggcccagct cggccgcccg
      781 gacgcgggcc tcgcggtgca gcgccacgaa ggccgggtcc tccggattga ccggcagcat
      841 ctcctcggct tcgcgcacca ccgactggag gtagccgtcc ttgtcgctgt aatggatggc
      901 gatgccgcgc ttctcgccgt ggagcaacag ctgcatgccg gacaggcccc gctggagctg
      961 gccgatccgg gcgatggttc cgatggtata caggacgtcg gagctcacgc tctcgacgtt
     1021 ctggcgttga gacaccgcga agaccaggcg gtccggcgtg gccagggcgg cctcgatggc
     1081 ccggagagtc gccggccgtc cggcgccgat cggcgccgtt acgcccggaa acagtaccac
     1141 ctcgcgcagc ggcaggaccg gcagattcag acgttcactc atctatctac tgctccttcc
     1201 agtcccctga tggggaggaa tcccctcacg gggaatatgg cagaaaaatt acaggccggg
     1261 cccggaggtg cacccaacgt gccaccggat cggtgttccg tccgttgtca atcaacagct
     1321 tacaggtgcc ggcagttccc gtccggatga tcctcggcac catcatggca gggatccgcg
     1381 accacagcgc ggctcgctgc catattggcc gccgcgagcc gatctcggcc gagcctcctg
     1441 ccggcggcag ggtggcggtg gcgacggcgc cggtacagat tgtctgccat gtccggctgc
     1501 atcttccgag accagcgcag cttcccccac gcccgtccgg cgcccctccg cacgtgacca
     1561 gcccgtccga acagccactt cccacccggc tcgccgcggc gctgggcgac gcctacacca
     1621 tcgaaggcga gatcgggcgg ggcgggatgg gcgtcgtcta ccgggcccgg gacgagcggc
     1681 tccagcggcg ggtggcgatc aaggtcctcc cgccggagct cgcgtttcag caggacatcc
     1741 gcgagcggtt tacccgcgag gcccagaccg ccgcccggct gagccatccg cacatcgtgc
     1801 cgatccacac cgtcggcgaa ggttatgggc tggtctactt cgtgatgggc tacgtggacg
     1861 gcgagtcggt ggcggcccgg atccggcgcc ggggcaagct cccgatcgaa gaggcccggc
     1921 ggatcatggc cgaggccgcc gacgcgctgg gcgccgccca cgcggtctcg atcatccatc
     1981 gcgacatcaa gcccgacaac atcctgctcg aggggcctcg gggccgggtc atggtcaccg
     2041 act
//
LOCUS       DATIFF010001189         1657 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_919187, whole genome shotgun sequence.
ACCESSION   DATIFF010001189 DATIFF010000000
VERSION     DATIFF010001189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1657)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1657)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1657
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_919187"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..397
                     /locus_tag="VLD58_17275"
     CDS             <1..397
                     /locus_tag="VLD58_17275"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSB56118.1"
                     /translation="TEYRQVLQDDIGFYMANVRLAGIYEAQKDYPYAVQERVNAINAN
                     PDDPSLLLDLGVTLGKAGMMPQAEDKLRQATEGNPRDSRAWFWLGMAEMEEGKRDEAR
                     DSFNRFVSLAPSRYDRQIVMAKERLAQLK"
     gene            405..>1657
                     /locus_tag="VLD58_17280"
     CDS             405..>1657
                     /locus_tag="VLD58_17280"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HSB56119.1"
                     /translation="MRHRTSTALCAAALLAALPGRLDGQASYEQLQTFSSLLNQIRQS
                     YVDSVSYAELVHAAIDGVLSSLDPHSRFLRRADGDRESAYEAGELAGTGIVFDEVDGR
                     LTVLTVIPRSPAARSGVAPGDRLVSINDTVSAGLSQYEVGLRLLGDKGTKVRLLFERG
                     SRLEPDSVRVSLKYDYLEPRSVTSVRMVDATTGYLRLSGFHAKAGEEVERAIKDLKGK
                     GARRLVLDIRGNPGGLVYAAVDVASLFLPKQTLVFKAEGRRPSVNSEYRTEGNGAFRD
                     LPLMVLIDDGSASASEALAGTLQDHDRALLLGRRSFGKALMQQGYPIPPQGDLVYLTV
                     GRIATPSGRVIQRAYHGLKASQYYSFAGRSGAAQDTTTIFHTDHQREVRGGGGIVPDI
                     AIPRAATVPSWWGIAADSGWVEAVA"
BASE COUNT          264 a          557 c          572 g          264 t
ORIGIN      
        1 caccgagtac cgccaggtgc tccaggacga catcggcttc tacatggcca acgtgcgcct
       61 cgcggggatc tacgaggcgc agaaggacta cccctacgcg gtgcaggagc gcgtcaatgc
      121 catcaacgcc aatcccgacg accccagcct gctcctcgac ctgggcgtca ccctggggaa
      181 ggccggaatg atgcctcagg cggaggacaa gctgcggcag gccaccgagg gcaatccgcg
      241 ggattcgcgg gcctggttct ggctcggcat ggccgagatg gaggagggca agcgcgacga
      301 ggcccgggat tccttcaacc ggttcgtttc cctggcgccc agccggtacg accgccagat
      361 cgtgatggcc aaagagcgtc tggctcaact caagtaggtg ctccgtgcgt caccggactt
      421 ccacggccct gtgcgcggcg gcgctgctcg ccgcgctgcc cggacggctg gacggtcagg
      481 cgtcctacga gcagttgcag accttctcca gcctgttgaa tcagatccgc cagagctacg
      541 tggactcggt gtcctacgcc gagctggttc acgcggccat cgatggcgtg ctgagctcgc
      601 tcgatccgca cagccgcttc ctccgccggg cggacggcga tcgtgagtcg gcctacgagg
      661 ccggcgagct ggccggcacc ggcatcgtct tcgacgaggt ggatggtcga ctcaccgtgc
      721 tcaccgtgat tccccggagc ccggcggcca ggtccggcgt ggcgccggga gaccggctgg
      781 tcagcatcaa cgacacggtc agcgccggcc tctcccagta cgaggttggc ctgcggttgc
      841 tgggcgacaa ggggacgaag gttcgcctgc tgttcgaacg cggctcgcgg ctggaaccgg
      901 acagcgtccg ggtgagcctc aaatacgatt atctcgagcc tcgctcggtg acctccgtcc
      961 ggatggtgga cgccaccacc ggctacctgc ggctctcggg gttccatgcg aaagcgggcg
     1021 aggaagtgga gcgggccatc aaggacctca agggcaaggg cgcccgccgc ctggtgctgg
     1081 acatccgggg caacccgggc ggcctggtgt acgcggcggt ggacgtggct tcgctcttcc
     1141 tgccgaagca gactctcgtg ttcaaggctg aaggccgccg gcccagcgtc aacagcgaat
     1201 accggactga gggcaacggc gcgttccggg atctgccgct catggtgctc atcgatgacg
     1261 gcagcgccag cgcttccgag gcgctcgccg gcacgttgca ggaccacgac cgggctctcc
     1321 tgctcggccg ccgcagcttc ggtaaggcgc tgatgcagca gggctatccg atcccgcccc
     1381 agggagacct ggtctatctc acggtgggcc ggatcgccac tccgagtggc cgggtgatcc
     1441 agcgggctta ccacggcctg aaggcgtccc agtattacag ttttgccggc cggtcgggcg
     1501 ccgcgcagga caccaccacc attttccaca ccgatcacca gcgggaggtc cgcggcggcg
     1561 gtgggatcgt tccggacatc gccattcccc gtgccgccac ggtgccgtcg tggtggggga
     1621 tcgccgcgga cagcggctgg gtcgaggccg tcgccga
//
LOCUS       DATIFF010001190         3711 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_458413, whole genome shotgun sequence.
ACCESSION   DATIFF010001190 DATIFF010000000
VERSION     DATIFF010001190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3711
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_458413"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1666
                     /locus_tag="VLD58_17285"
     CDS             <1..1666
                     /locus_tag="VLD58_17285"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB56120.1"
                     /translation="GEGFVERFEREAQALAALRHPNIVPVYAIGDQGELIYLIMPFVE
                     GVTLTDYLREHGRLALDEAARILRAVGGALSAAHGVGLVHRDIKPDNIMLEGPKRHPL
                     LMDFGIAKTGQTGGGVGLTSTGMVLGTPLYMSPEQAKADPAVDARSDIYSLGILAYQL
                     FTGELPFNGDSIYAVLNQHLTTPVPEPRTLRPEIPAQVSAALRRAMAKQPAERFQHVE
                     DFIEALEGRGGAAMPRQWALPGSRTLVTALLGGVLLALAAVVLWKGSQPVARAPVHAE
                     LRAQGVWLRLGVATAPWDRALTLGSLGISGLEEVSLPAQDKNPARTVATPTLFLKAVH
                     PDSGGISIDPIRLPAGTLIAVRHTGSAGLVQLTIGDSLPPIPVSVSGPIVVSLPDEPA
                     DTIPFRIDQIQLTAPRGALDFELGFEGAGPARPLVPLEVIGVSFQDVNRFRDEEQASD
                     QAVSTIDSGTFGLGVGNRAAHTLTKGEDLPLHGFRGAIRDVAVDSQAVALTLEGTVDS
                     LPASLGSIPSKLQVFWSAHPVASGGAGLIYLALLGLVGLYWKRGTR"
     gene            1663..2832
                     /locus_tag="VLD58_17290"
     CDS             1663..2832
                     /locus_tag="VLD58_17290"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HSB56121.1"
                     /translation="MRAVAGLVLVTITAAPLAGQRMSRMPVEAANLVVQVLASGGDDE
                     EVGAGIVVAASNHIIIATAAHVVRTAQQGGAVRVVFQFARNDTVEAKIDQVDRELDLA
                     VLSLPRDGRSPIQFAFDRGGDPGALEIGALVVPLGCPERRCWEPPVSGDRVISASSRR
                     VRFESFFVSPGSSGGALFNQQWEVVGLVTEKNTQDGIAVGMSEVADRLRKWGYTVQLG
                     PTSIPRAGYRTRLSLVGLAPTSGGLTQSGRWPGGRLALLLRGQERIGWHLTAIRLAPQ
                     DLKVTGGMVGTSVSLRAGRLGIAPFGEVGVARVNGRFNAGSYFVQTASGTVAVPVWQT
                     VTNDVIGVGIGADVEFLVAPHVAVSGVVGHWSFRTDAPLPSVPDVFVGAGLKLAF"
     gene            2853..>3711
                     /locus_tag="VLD58_17295"
     CDS             2853..>3711
                     /locus_tag="VLD58_17295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56122.1"
                     /translation="MTRRSPYVKAATTLLLGALLTTCTNELAPTGAIVVRLEKGAAWP
                     DTLAVAEIASLAVSVTGPDQQVVTGVTLAWGSTDSSVVTVTDAAAALHAIVSSRRTGA
                     ATIVVRVTQTGFEPVELRAPVVVRARGADSLLSVGDVDTIGLALQRVDPAFLTGATVT
                     WGSSDPSVVGVATLAADSTRAVITGRFSGTAQVTATVQNPLGRSTFQLPVTVLPLEIS
                     ELPAWAPTVNRTNTAPFAVQVKDALGRIRTGVKVQWRSTNETAFTVDSTGTVLGKTRG
                     GGELVASVGV"
BASE COUNT          522 a         1271 c         1317 g          601 t
ORIGIN      
        1 cggcgaaggg ttcgtggagc ggttcgagcg ggaggcgcag gccctcgccg cgctgcgcca
       61 ccccaacatc gttccggtct acgcgatcgg cgaccagggt gagctgatct acctcatcat
      121 gccgttcgtc gaaggcgtca ccctcaccga ctatctccgc gagcacggcc gcctggccct
      181 ggacgaagcc gctcgcatcc tgcgggcggt cggcggcgcc ctctccgccg cgcacggcgt
      241 ggggctcgtc catcgcgaca tcaagccgga caacatcatg ctggaggggc cgaagcgtca
      301 cccgctgctc atggatttcg gcatcgcgaa aaccgggcag acgggcggcg gtgtgggcct
      361 cacctccacg ggcatggtgc tgggaacgcc gctgtacatg agcccggagc aggccaaggc
      421 ggatccggcc gtggatgcgc gctcggacat ctactccctc ggcatcctcg cctatcagtt
      481 gttcaccggg gagctcccgt tcaacggcga ttcgatttac gccgtgctga accagcacct
      541 gacgaccccg gttcccgaac cgcgcaccct gcgccccgag attcccgccc aggtttcggc
      601 cgcgctgcgc cgggcgatgg cgaagcaacc ggccgagcgt tttcaacacg tcgaagattt
      661 catcgaggcg ctcgaggggc ggggcggcgc cgccatgccc cggcagtggg ccctgccggg
      721 cagccgaacg ctcgtgaccg cgctgctcgg gggtgtgctc ctggctctgg ccgcggtcgt
      781 gctctggaag ggctcgcagc cggtggcgcg tgcacccgtc catgccgagc tccgcgcgca
      841 aggcgtgtgg ctccggctgg gggtcgcgac ggcgccgtgg gaccgcgcgc tgaccctggg
      901 atccctcggg atctcggggc tcgaggaagt ctcgcttccc gcccaggaca agaacccggc
      961 gcgcaccgtc gccacgccga ccttgttcct caaggcggtt cacccggatt ccggcgggat
     1021 cagcatcgac ccgattcgcc tcccggcggg caccttgatc gccgtacggc acaccgggtc
     1081 cgccggcttg gtgcagctga ccatcggaga ctcgctcccg cccatcccgg tctcggtgag
     1141 cgggccgatc gtcgtgagcc tgccggacga gccggcggac acgattccgt tccgcatcga
     1201 tcagatccag ctcacggctc cccgcggggc gctcgatttc gagctgggct tcgagggcgc
     1261 ggggccggcg cgtcccctgg taccgctcga ggtcatcggc gtgagcttcc aggacgtgaa
     1321 tcggttccgc gacgaggagc aggccagcga tcaggcggtg tcgaccatcg acagcggcac
     1381 attcggactc ggcgtcggca accgggctgc ccataccctg acgaaggggg aggacctgcc
     1441 cctgcacggc ttccgcggcg cgatccgtga cgtcgcggtc gactcccagg ccgtggccct
     1501 caccctcgag ggcaccgtcg attccctgcc cgcctcgctc ggctcgatcc cgagcaagct
     1561 gcaggtcttc tggtcggcgc atcccgtggc ctcgggcggc gccggcctca tctatctcgc
     1621 gctgctcggt ctggtcgggc tctattggaa gaggggcaca cgatgagagc ggttgccggt
     1681 ctggtgctgg tcactatcac tgctgcccca ttggcgggcc agcgcatgtc acgcatgccg
     1741 gtggaggccg ccaacctggt ggtccaggtg ctggccagcg ggggggatga cgaggaggtc
     1801 ggggccggta tcgtggtcgc ggcatccaat cacatcatta tcgcgaccgc ggcccacgtg
     1861 gtccgcacgg cccagcaggg tggcgcggtc agagtggtgt tccagttcgc tcgcaacgac
     1921 accgtcgagg cgaagatcga tcaggtggac cgcgagctcg acctggcggt gctgagccta
     1981 ccgcgtgatg gacgctctcc cattcagttc gccttcgacc ggggaggaga ccctggggcg
     2041 ctcgagatcg gtgccctggt cgtcccgctg gggtgccccg agcggcggtg ctgggaacct
     2101 ccggtgagcg gtgaccgcgt gatcagcgcg agctctcgcc gagtgcgctt cgagtcgttc
     2161 ttcgtgagcc cggggagctc ggggggcgcg ctgttcaacc agcagtggga ggtggtggga
     2221 ctggtgaccg agaagaacac ccaggacggc atcgccgtcg gcatgagcga ggtggccgac
     2281 cggctgcgga agtggggcta cacggtccag ctgggtccga cgagcatccc gcgcgccggg
     2341 tatcgcactc ggctcagtct ggtcgggttg gctccgacct ccggcggcct gacccaatcc
     2401 ggccggtggc cgggtgggcg actcgcgctc ctgctccgcg gccaggagcg gatcggctgg
     2461 cacctgacgg cgatccgtct cgcgccccag gacctgaagg tgaccggcgg catggtgggg
     2521 accagcgtct cgctccgggc tggacggctc gggatcgctc cgttcgggga ggttggggtc
     2581 gcccgggtaa acggacgctt caatgccggg agctacttcg tccagaccgc gagtggaacc
     2641 gtggcggtcc ccgtatggca gacggtgacc aacgatgtga tcggcgtcgg catcggggcg
     2701 gacgtggaat tcctggtcgc tccccacgtc gccgtctcgg gtgtcgtggg acactggagc
     2761 ttccgcaccg atgcgccgct cccgtcggtt cccgacgtat tcgtcggggc gggcctcaag
     2821 ctcgctttct aaccctgaga ccctgtccat tcatgaccag acgatcgccg tacgtgaagg
     2881 cagcaacgac gctgctcctc ggggcgcttc tgaccacctg caccaacgaa ttggcgccca
     2941 ccggggcgat cgtggtgcgc ctcgagaagg gcgccgcctg gcccgacacg ctggccgttg
     3001 cggaaatcgc ctcgctggcc gtctccgtca cgggcccgga ccagcaggtc gtcaccggcg
     3061 tgacgttggc gtggggctcc accgattcct cggtggtgac cgtgaccgac gctgcggcag
     3121 ccctgcacgc catcgtgagc agccggcgta ccggagcggc cacgatcgtc gtgcgggtca
     3181 cccagaccgg attcgagccg gtcgagctgc gggcgccggt cgtcgtccgg gcacggggcg
     3241 ccgattcgtt actctccgtc ggcgacgtgg acacgatcgg tctggcactg cagcgcgtgg
     3301 accccgcctt cctgacgggg gccaccgtga cctgggggtc gagcgatccg tccgtcgtcg
     3361 gggtcgcgac cctggccgcg gattccaccc gggccgtgat caccggccgg ttcagtggca
     3421 cggcgcaggt caccgcgacg gtccagaacc cgctcggccg ctcgacgttt cagctgccgg
     3481 tcaccgtcct cccgctcgag atcagcgagc tgcccgcatg ggcgccgacg gtcaaccgga
     3541 ccaacaccgc gccgttcgcg gtgcaagtga aggacgcatt gggccggatc agaacggggg
     3601 tcaaggtgca gtggcggtcc accaacgaga cggcgttcac ggtggattcg accggcaccg
     3661 tgctgggcaa gacccgcggg ggtggcgagc tggtggccag cgtcggcgtc g
//
LOCUS       DATIFF010001191         2162 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1998226, whole genome shotgun sequence.
ACCESSION   DATIFF010001191 DATIFF010000000
VERSION     DATIFF010001191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2162
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1998226"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..342)
                     /locus_tag="VLD58_17300"
     CDS             complement(<1..342)
                     /locus_tag="VLD58_17300"
                     /inference="COORDINATES: protein motif:HMM:NF014173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HSB56123.1"
                     /translation="MRVTTWTEYSLIISLHLARRGRTAAEPVAARELADVERLPADYV
                     EQILLRLRRAGLVESVRGAKGGYYLARDPSAISVRDVMTASEHQTFEVNCESHPVDAE
                     RCHPASSCSIRP"
     gene            complement(360..1778)
                     /locus_tag="VLD58_17305"
     CDS             complement(360..1778)
                     /locus_tag="VLD58_17305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HSB56124.1"
                     /translation="MAFRIERDPLGEKPVPAGALYGIQTLRAAENFPISGLRPLPVFV
                     DAVIWIKRAAALTHRQTGRLDGQLAEAIVRAADEVLSGQHRDQFIVDIYQAGAGTSHN
                     MNCNEVLANRANELLGAERGTYAPVHPNDHVNMAQSTNDVIPTAIRLATLATLPALLA
                     SLDRLAEVLLAKGDAFDHIVKSGRTHLQDATPIRLGQEFRAYGRTVARHRVKLEQAAE
                     WLRELNIGGTAVGTGINAEPEYPRLMVAHLREMTGLHLEEGKDRVQLMQSMGDVATFS
                     GALRAYVVDLQKIANDIRLLASGPRTGLAEILLPAVQPGSSIMPGKVNPSIAEMVNQV
                     CYQALGLDLTVAMAAEAGQLELNVMMPVMAHNIVFAMIIVGNASRVLADKCVAGIEPD
                     EAQCAYWLERSPALVTALAPEIGYAEAAKLAKEALATGLTVRELVLKKGILEGAKRDA
                     VLDLRAMTELGVPGGKGIPAGG"
     gene            1836..>2162
                     /locus_tag="VLD58_17310"
     CDS             1836..>2162
                     /locus_tag="VLD58_17310"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSB56125.1"
                     /translation="MTYFLDPASSAVFRPETFAKADLARGARLFLGLNCFVPGQRQAA
                     HTHAGADKFYLVVSGKARMTVGTETRVAGPGALVWAPAGVPHGVDEALERTVLLVGIA
                     PPPATAR"
BASE COUNT          314 a          743 c          742 g          363 t
ORIGIN      
        1 ggggcggatg ctgcacgagg aggcggggtg acagcgttcc gcgtccaccg gatgcgactc
       61 gcagttcact tcgaaggtct ggtgctccga cgcagtcatc acgtcgcgga ccgagatcgc
      121 ggagggatcg cgcgcgaggt aatacccgcc cttggccccg cggacgctct cgaccagccc
      181 ggcgcggcgc aggcggagca ggatctgctc cacgtagtcg gccggcagcc gctcgacgtc
      241 cgcgagctcg cgggcggcga cgggctcggc tgcggtgcgc ccccgccggg ccagatggag
      301 ggaaatgatg agactgtact cggtccaggt ggtgacacgc ataccgcaat atcaccggat
      361 caaccgcccg ccggtatccc cttgccgccc gggaccccga gctcggtcat ggcccggaga
      421 tcgaggaccg cgtcgcgctt cgctccctca aggatccctt tcttgaggac cagctcccgc
      481 accgtgagcc ccgtcgccag cgcctccttg gcgagcttgg cggcctcggc gtatccgatc
      541 tcaggggcaa gtgccgtgac gagcgccggg ctgcgctcga gccaataggc acactgggcc
      601 tcgtccggct cgatgccggc cacgcacttg tccgccagca cccggctcgc gttccccacg
      661 atgatcatgg cgaacacaat attgtgcgcc atcaccggca tcatgacgtt gagctccagc
      721 tgtccggcct ccgccgccat cgccacggtg agatcgaggc cgagggcctg gtagcacacc
      781 tggttcacca tctcggcaat cgacgggttc accttgccgg gcatgatgct cgatccgggt
      841 tgcaccgccg gaagcaggat ctcggccagc ccggttcgcg gccccgacgc gagcagccgg
      901 atgtcgttgg cgatcttctg caggtccact acgtacgccc ggagggcgcc gctgaaggtg
      961 gccacatcgc ccatcgactg catcagctgg acgcggtcct tgccctcctc gaggtggagt
     1021 ccggtcatct cccggaggtg ggctaccatg aggcggggat actccggctc cgcgttgatt
     1081 cccgtcccca cggcggtgcc gccgatgttg agctcccgca gccactccgc cgcctgctcc
     1141 agcttgaccc gatgccgggc cacggtccgc ccgtaggccc ggaactcctg gcccaggcgg
     1201 atgggcgtcg cgtcctggag atgggtgcgc ccggacttca cgatgtgatc gaaggcgtcg
     1261 cccttggcga gcaggacctc ggccagccgg tcgagcgagg ccagcagcgc aggcagggtc
     1321 gccagcgtcg cgagccggat cgcggtcggg atcacgtcgt tggtgctctg ggccatattg
     1381 acgtgatcgt tcgggtgcac cggggcgtag gtgccccgct cggcgcccag gagctcgttg
     1441 gctcggttgg ccaagacttc gttgcagttc atgttgtggc tggtgccggc gcccgcctgg
     1501 tagatgtcca cgatgaactg gtcgcggtgc tggccgctga ggacctcgtc ggcggcccgg
     1561 acaatggcct ccgccagctg gccgtcaagc cgacccgtct gcctatgggt gagcgccgcg
     1621 gcgcgtttga tccagatcac cgcgtccacg aacaccggca acggccggag cccggagatg
     1681 ggaaaattct ctgccgcgcg gagcgtctga atgccgtaga gggcgcccgc gggcacgggc
     1741 ttctccccga gggggtcgcg ttcgatgcgg aatgccattg ggaagccgtg ggttgtcagc
     1801 gatcggccgg tcgctgatag cttattggtc aggccatgac ctacttcctc gatcccgcgt
     1861 cctctgctgt cttccgtccc gagaccttcg ccaaggcgga cctcgcgcgg ggcgctcggc
     1921 ttttccttgg cctcaactgc ttcgtcccgg gccagcgcca ggcggcccac acgcatgccg
     1981 gcgcggacaa attctatctg gtcgtctcgg gaaaggcgag aatgacggtg gggacggaaa
     2041 cgcgcgtcgc cggaccggga gccctcgtgt gggcgcccgc cggtgtcccc cacggcgtgg
     2101 acgaggcgct ggaacgcacg gtgctgctcg tcggcatcgc tccgccgccg gcgacggcaa
     2161 gg
//
LOCUS       DATIFF010001192         1304 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1843601, whole genome shotgun sequence.
ACCESSION   DATIFF010001192 DATIFF010000000
VERSION     DATIFF010001192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1304
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1843601"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..739
                     /locus_tag="VLD58_17315"
     CDS             <1..739
                     /locus_tag="VLD58_17315"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSB56126.1"
                     /translation="QEPEPSPAALAAGFDAAYFTAGEGDGCSDYLAMERSLRRQARRR
                     LRALPPLLPGRHPRLLDVGCAAGFLLDEARKQGWHVTGVELNAAMATVGRERLDLDIV
                     TGSLDDMPVTGPFDAVFMLNVLEHLASPRHVEGQLARLVRPGGILVIETWDEASLVAR
                     LQGVHWHQWSPLVPYYHVRRSLDALFAAERWEQGWWRRAVKWIPVWRGLEILGVQRGA
                     RWRHRAPWCWEIPYAAGDLVLASYRRR"
     gene            856..>1304
                     /locus_tag="VLD58_17320"
     CDS             856..>1304
                     /locus_tag="VLD58_17320"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HSB56127.1"
                     /translation="MADPRRELTFLLAGPERRLLRWIAARLPGWVTSDQLTALGILAA
                     TAAATAYALSGLHPGWLWGASAALIVNWLGDSLDGTLARVRHTERPRYGYYLDHAVDA
                     YATAAIGIGLGLSPYVSLGVALGLVIVYLWLSINVYLESTVFGAFRLA"
BASE COUNT          174 a          445 c          455 g          230 t
ORIGIN      
        1 ccaggagccc gagccgtcgc ccgccgcact cgccgccggt tttgatgccg cctacttcac
       61 ggcgggcgag ggcgatggct gcagcgacta tctcgccatg gagaggagcc ttcggcgcca
      121 ggcacgccga cggctgcggg cacttccccc tctgttgccc ggaaggcacc cgcgcctcct
      181 cgatgtcggg tgcgcggccg gtttcctgct cgatgaagcc cggaagcagg gctggcacgt
      241 gaccggtgtg gagttgaatg cggcaatggc tacagtcggc cgcgagcggc tcgatctcga
      301 catcgtgacc gggtcgctgg acgacatgcc ggtgaccggg ccgtttgatg ccgtcttcat
      361 gctgaacgtg ctcgaacacc tggcgtcgcc gcgccatgtc gaaggccagc tggcccggct
      421 ggtccggccc ggcgggatcc tggtgatcga gacctgggat gaagcgtcac tcgtcgccag
      481 actccagggt gtgcactggc accagtggtc gccactggtg ccctactacc atgtacggcg
      541 atccctggat gcgctctttg ccgcggagcg gtgggagcag ggctggtggc ggcgggcagt
      601 gaagtggatt ccggtatggc gcgggctcga gatcctcggc gttcagcgcg gggcccgctg
      661 gcgccaccgc gctccatggt gttgggaaat cccctacgcc gccggcgacc tggtgctggc
      721 aagctatcgt cgccgttgac cccgggcagc tatcctggac gcctggattc gggaaaggag
      781 ccgccggaca cgggtcttga gaaccgcttg agacggctgc cccatcgtgc ctccggactc
      841 gtaccggagg cacgcatggc ggaccctcga cgtgagctga ccttccttct cgccggtccc
      901 gagcggcggc tgctgcgctg gatcgccgcg cggttgccgg gctgggtgac gtccgaccag
      961 ctcacggcgc tcggcatcct ggccgcgacc gccgccgcca cggcgtacgc cctgtcgggc
     1021 ctccatccgg gatggctctg gggcgcgagc gccgcgctga tcgtcaactg gctgggcgac
     1081 agcctcgatg ggacgctggc acgagtacgg cacacggagc gtccgcgcta cggctactac
     1141 ctggaccacg ccgtggacgc ctacgcgacc gctgcgatcg gcatcgggtt gggcctctcc
     1201 ccctacgtga gcctgggcgt cgccctgggg ctggtcatcg tctatctctg gctctcgatc
     1261 aatgtctatc tcgagtccac cgtgttcggc gcattccggc tcgc
//
LOCUS       DATIFF010001193         1589 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_458558, whole genome shotgun sequence.
ACCESSION   DATIFF010001193 DATIFF010000000
VERSION     DATIFF010001193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_458558"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..548)
                     /locus_tag="VLD58_17325"
     CDS             complement(<1..548)
                     /locus_tag="VLD58_17325"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSB56128.1"
                     /translation="MILRGTGLTVRYPGVETAALTGVDVGLAPGELVAVVGPNGSGKT
                     TLLRALVGSARLEAGQVEVDGRVLESWTPRALAQVIAVVTQREDILFPLSVRETVELG
                     RYAHLGPLADPGPADAQAVTEAMERADVLGFASRRTDTLSGGEWQRVRVARALAQNPR
                     VLLLDEPTAALDIRHEMEVFELV"
     gene            complement(545..>1589)
                     /locus_tag="VLD58_17330"
     CDS             complement(545..>1589)
                     /locus_tag="VLD58_17330"
                     /inference="COORDINATES: protein motif:HMM:NF013219.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HSB56129.1"
                     /translation="GVRASQSAGAGAGAGAARFPGGGAMKSRWPWLLALTLVALIGGL
                     SLGATRIAPSAIWLGLRDGSSDAAPIVRQLRLPRVLLGFLVGGGLAVSGAVLQALVRN
                     PLADPFVLGISGGATLGAVAAISAGMNNPWAVPFAAFAGAVATLVLVYRLSLVAGRRL
                     DSGVLLLAGVVVSSFAMALVTAILMLVDATRVQNSFRWMLGGLWAASWTTVTMVAAYG
                     SVPLAVLLLRARDLDLLALGEEQARHLGADPERVKRLAYLATGFLTAVAVATSGAIGF
                     VGLLVPHAVRKLWGPLHRALLPSVFLAGGGFLVLADAIARSIAPPVELPVGVVTALVG
                     VPFFAMLLKRRLG"
BASE COUNT          288 a          572 c          553 g          176 t
ORIGIN      
        1 accagctcga agacttccat ttcatgtcgg atgtcgagcg cggcggtggg ctcgtcgagc
       61 agcagcaccc gagggttctg cgccagagcc cgggcaaccc gcacccgctg ccattcgcca
      121 ccggagaggg tatcggtgcg gcggctggcg aaccccagca cgtcggcgcg ctccatcgcc
      181 tcggtcaccg cctgcgcgtc ggcgggaccg gggtcggcga gaggtccgag gtgggcgtac
      241 cggcccagtt ccacggtctc ccgcacgctg agcgggaaga ggatgtcctc ccgctgcgtc
      301 accaccgcga tcacctgcgc cagtgcccga ggcgtccagc tctcaagcac acgaccatcg
      361 acttcgacct ggccggcctc gagccgcgcg ctgccgacga gggcgcggag gagcgtcgtc
      421 ttgccgctcc cgttggggcc gaccacggcc accagttcac cgggcgcgag cccgacatcg
      481 acgccggtta gcgcggcggt ttcgacgccg ggatagcgca cagtgagacc ggtgccgcgg
      541 aggatcatcc cagcctccgc ttgaggagca tggcgaagaa cgggacgccc acgagcgcgg
      601 tcaccacacc gaccgggagt tcgaccggcg gtgcgatcga tcgggcaatc gcgtcggcca
      661 ggacgaggaa gccacccccg gcgagaaaca ccgagggaag gagtgcccga tgcagcgggc
      721 cccacagctt tcttaccgca tggggaacca ggagccccac gaatccgatc gcgccactgg
      781 tcgcaacggc gacagcggtg agaaacccgg tggcaaggta ggccagccgc ttgacccgct
      841 cggggtcggc gccgagatgc cgggcctgtt cctcgcccag ggcaagcagg tcgagatcgc
      901 gggcccggag cagcagcacc gcgagcggca cactgccgta tgcggccacc atggtgacgg
      961 tggtccacga ggcggcccag agtccgccca gcatccagcg gaaagagttc tgcacccggg
     1021 ttgcatcgac cagcatgagg atcgcggtta ccagcgccat ggcgaatgaa ctcaccacca
     1081 cgcccgcgag gagcagcacg cccgagtcga gtcgccgccc ggccaccagg ctcaggcgat
     1141 agaccagtac cagtgtcgca accgcaccgg caaaggcggc gaacggcact gcccacgggt
     1201 tgttcatccc ggcggagatg gctgccaccg ctccgagcgt cgcgccgccg gagatgccga
     1261 ggacgaaggg atcggccagg ggattgcgca ccagcgcctg gagcaccgcc ccgctcaccg
     1321 ccaggccgcc accgaccagg aagccgagca acacccgcgg cagccgcagc tggcgcacga
     1381 tcggcgcagc gtcggagctg ccgtcgcgca atccgagcca gatggcggac ggcgcgatcc
     1441 gggtggcccc gagtgagaga ccgccgatga gcgccacgag cgtaagcgcc aggagccagg
     1501 gccagcggga cttcatcgcg ccgccaccag ggaatcgcgc agcgcccgca ccagcgccgg
     1561 cgcccgcgga ctgggacgcc cgaacgccg
//
LOCUS       DATIFF010001194         1745 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1230686, whole genome shotgun sequence.
ACCESSION   DATIFF010001194 DATIFF010000000
VERSION     DATIFF010001194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1230686"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(16..309)
                     /locus_tag="VLD58_17335"
     CDS             complement(16..309)
                     /locus_tag="VLD58_17335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56130.1"
                     /translation="MPVLRAAAGALLLVSMLAGCSLYGYKYRVWERANASNEELDRDL
                     AACGPESRVGTTEGSPDPNTYFLGPVTTEQTQANRLFQRCMSARGWWAQQPRL"
     gene            464..1264
                     /locus_tag="VLD58_17340"
     CDS             464..1264
                     /locus_tag="VLD58_17340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56131.1"
                     /translation="MRANMMRNIVSRKTAIGLTITVGLCLALALPAWAGRGFGGGGGM
                     SVGGSGFHGGGFHGGGFHGGSVHRGGVHRGGVHRGGFHQGSGFHGKCCVNGAFFSGFV
                     FGSFPAPYYYYPYPDYSYPSYGVELDVPVPAVPAPAQLDVSPPIPREACYATGCYHLQ
                     GDGVTVTYQWVWVPAPPPPPTVIQYPTGRYELRGPARWEWVPNPSASPPLPPPASPAP
                     SRSSDASAPIMTHYGLYRWTDANGVTHWTQGLDAVPERYRSRAGAGTL"
     gene            1402..>1745
                     /locus_tag="VLD58_17345"
     CDS             1402..>1745
                     /locus_tag="VLD58_17345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56132.1"
                     /translation="MTTMQRAEAAEHAMSEELDRIVVKSVLYTSGERDPRVPVPRPPD
                     QGKLYLMGHDPRLPRMPDKPTLFDFFRYRFGPSAHMLQSARLAQKNGVSEKIVLACLL
                     HDIAIAGFIRSD"
BASE COUNT          263 a          599 c          593 g          290 t
ORIGIN      
        1 gcgtgatgcg gatcgtcaca ggcgcggctg ctgggcccac catccgcgcg cgctcatgca
       61 gcgctggaag agccggttcg cctgggtctg ctcggtcgtg accgggccca ggaagtaggt
      121 gttcgggtcg gggctgcctt cggtggttcc gacgcgtgac tcggggccac aggccgccag
      181 gtcgcggtcg agctcctcgt tcgaagcgtt ggccctctcc cacacacgat acttgtatcc
      241 gtagagggag cagccggcga gcatcgagac gaggagcagc gcgccagccg cggcacgtag
      301 cacgggcatg aaggcctcca ttggaagacg cgggtatccc cttgacacca tgctgggcgc
      361 gagtttatca gaaggcagcc tgcgcgcggg cagaccgcgg aggcggagga tccgcggggt
      421 cggctccggc gttacaatgg cgcagaagcc gagatggaag cgggtgaggg ccaacatgat
      481 gcggaacatc gtgtcgagga agacggccat cgggctgacc atcaccgtgg gactgtgcct
      541 cgcccttgcc cttcccgcct gggctggaag gggattcggc ggtgggggag gcatgagtgt
      601 cggcggtagt ggctttcacg gcgggggctt ccacggcggg ggcttccacg gcgggagcgt
      661 ccaccgcggc ggcgtccacc gcggcggcgt ccaccgcggc ggcttccacc agggcagcgg
      721 ctttcacggc aagtgttgcg tcaacggcgc cttcttctcc gggttcgtgt tcggctcatt
      781 tccggcgccg tactactact atccctatcc tgactattcc tatccttcct atggggtcga
      841 gctcgatgtg ccggtcccgg ccgtcccggc gccggcgcag ctcgatgtct ctcccccgat
      901 accccgcgag gcttgctatg ccaccgggtg ctatcacctg cagggtgacg gcgtcacggt
      961 cacctatcag tgggtatggg tgccggcgcc cccgccgcca cccacggtga tccagtatcc
     1021 gacgggacgc tacgagctgc gcgggccggc ccgctgggaa tgggtgccca atccctccgc
     1081 gagcccgccc ctgccgccgc cggcctcgcc cgctccctcc cgctcgtccg atgccagcgc
     1141 cccgatcatg acccactacg ggctctaccg ctggacggat gccaatggcg tgactcactg
     1201 gacccagggc ttggatgcgg tgccggagcg ttatcggtcc cgcgcaggcg ccggcaccct
     1261 ctgatgcgag cgatcgccct cgcggccgtt gtcgtggcgg gcatcaacta gccgcccccg
     1321 cttccggcaa gaacttgaca gccggccgct cggggcccga tgatcgggct cacgcgccgc
     1381 taatccccgg ggggagacca catgacgacg atgcagcggg ccgaggcagc cgagcatgcc
     1441 atgagcgagg agctcgaccg gatcgtcgtg aaatccgtgc tctacacgtc gggagagcgc
     1501 gatccgagag tgcctgtgcc gcggccgccg gaccagggca agctgtatct gatgggccac
     1561 gatccgcggc tgccccggat gcccgacaag cccacgctct tcgacttctt ccgctatcgc
     1621 ttcggaccct ccgcccacat gctgcagtcg gcacggctcg cgcagaagaa cggagtgagc
     1681 gagaagatcg tgctcgcctg cctgctgcac gacatcgcca tcgcgggctt catccgctcc
     1741 gatca
//
LOCUS       DATIFF010001195         1780 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_767668, whole genome shotgun sequence.
ACCESSION   DATIFF010001195 DATIFF010000000
VERSION     DATIFF010001195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1780)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1780)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1780
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_767668"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..229
                     /locus_tag="VLD58_17350"
     CDS             <1..229
                     /locus_tag="VLD58_17350"
                     /inference="COORDINATES: protein motif:HMM:NF025210.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HSB56133.1"
                     /translation="LTPVMLARRIVLTVHSDLEAVGFMAEISAALARVGSPCNVVSAV
                     FHDHLFVTEERAEAAMAALVRLQQPAGPDAA"
     gene            226..558
                     /locus_tag="VLD58_17355"
     CDS             226..558
                     /locus_tag="VLD58_17355"
                     /inference="COORDINATES: protein motif:HMM:NF025479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4286 family protein"
                     /protein_id="HSB56134.1"
                     /translation="MIYAVTVRVDAAIAEEWFEWMRTVHVPEILATGCFTRCVMQREI
                     ESPASDGRVTWVLEYLAPSLEHLRVYQRDYASSLQRSHTDRYAGRFEASRSVRLVECT
                     LPSASSPG"
     gene            639..1061
                     /locus_tag="VLD58_17360"
     CDS             639..1061
                     /locus_tag="VLD58_17360"
                     /inference="COORDINATES: protein motif:HMM:NF024845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HSB56135.1"
                     /translation="MSDEIAEGAELREPGPLHCPKCRAVMAPVVFAGIEVDRCTGCGG
                     IWFDILEQEDLRHLEGAEAIDTGDPDVGHQFDRVGLIRCPVDAEPMVRMVDKGQPSLW
                     LESCPLCYGMFFDAGEFSDFKDEGVRDMVLRRRRKRPI"
     gene            1065..>1780
                     /locus_tag="VLD58_17365"
     CDS             1065..>1780
                     /locus_tag="VLD58_17365"
                     /inference="COORDINATES: protein motif:HMM:TIGR00654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HSB56136.1"
                     /translation="MTLRYRQVDVFTAVPYRGNGLAVFPERGSLTARQMLAIAGELRQ
                     FESIFLASGATPEEVSARIFTVEEELPFAGHPVLGAAAVLHADRAADRERAIWRFVLQ
                     EKTVPVESRKTGMGWAAIMDQGLAVFGPPLARAQEGPFLAALSLTPADRPGDLPLQMV
                     STGLPYLIVPLRTDIGRARIAGPGFEALLGSVGAKFVYVLDPARPEGRTWDNQGAVED
                     VATGSAAGPTGAYLVRHGIAR"
BASE COUNT          247 a          625 c          612 g          296 t
ORIGIN      
        1 cctcaccccg gtgatgctgg cccggcggat cgtcctcacg gtgcattccg atctcgaggc
       61 ggtcgggttc atggcggaga tcagcgcggc cctggcgcgg gtcggcagcc cctgcaacgt
      121 ggtctcggcc gtgtttcacg accatctgtt cgtgaccgag gaacgagccg aggcagccat
      181 ggctgcgctg gtgcggctgc agcagccagc cggaccggac gccgcgtgat ctacgcggtg
      241 acggtccggg tggacgccgc gatcgcggaa gagtggttcg agtggatgcg gacggttcac
      301 gtcccggaga tcctggccac gggatgtttc acccggtgcg tcatgcagcg ggagatcgaa
      361 tccccggcat cggacggacg ggtgacctgg gtcctggagt acctcgcccc ctcgctcgag
      421 catctgcgcg tttatcagcg ggactacgcg tcctccctac agcggtcgca caccgaccgc
      481 tatgccggcc gcttcgaggc cagtcgcagc gtgagactcg tcgagtgcac cctcccctcc
      541 gccagctcgc cgggctgacc gctctcgacg tcggctaggc tcgcctcgct cgagtcgcca
      601 ccttgcgtgc accggcccga ccctccaccg ttccctgcat gagcgacgaa atcgctgagg
      661 gcgcggaact gcgcgaaccc ggtccgctcc actgccccaa gtgccgcgcc gtgatggcac
      721 ccgtggtatt cgccggcatc gaggtggatc gctgtaccgg gtgcggcgga atctggttcg
      781 acatcctgga gcaggaggat ctcaggcacc tggagggcgc cgaggcgatc gataccggcg
      841 atccggacgt ggggcaccaa ttcgaccggg tcgggctgat ccgctgcccg gtggatgccg
      901 agccgatggt gcgcatggtg gacaagggcc agccaagcct ctggctggag tcctgcccgc
      961 tctgctatgg catgttcttc gacgcgggcg agttcagcga tttcaaggac gagggcgtgc
     1021 gcgacatggt ccttcgccgc cggcgcaagc gcccgatctg atccgtgacg ctccgctatc
     1081 gccaggtgga cgtgttcacc gccgtgccct accggggcaa cggcctggcc gtctttcccg
     1141 agcggggaag cctcaccgcc cgccagatgc tggccatcgc cggcgagctc aggcagttcg
     1201 agtccatctt cctcgcttcc ggcgccacgc ccgaggaggt gtccgcccgg atcttcacgg
     1261 tcgaggagga gttaccgttt gcgggccatc cggtgctcgg cgcggcggcg gtcctgcacg
     1321 ccgatcgtgc ggcggaccgg gagcgggcca tctggcgctt cgtgctccag gagaagaccg
     1381 ttccagtcga atccaggaag accggcatgg ggtgggccgc catcatggac caggggctgg
     1441 ctgtgttcgg cccgccgctc gcccgtgccc aggaaggccc attcctggcg gccctctcgc
     1501 tcactcccgc cgatcgcccc ggcgacctcc cgcttcagat ggtctccacc ggcctcccct
     1561 acctcatcgt gccgctccgg acggacattg gtcgcgcccg catcgccggg cccggattcg
     1621 aggcgctgct cgggagcgtg ggcgccaagt tcgtctacgt gctcgacccg gcgcggcccg
     1681 agggccgcac ctgggacaat cagggagccg tggaggatgt cgcgaccggc agcgcggccg
     1741 ggccgaccgg cgcctacctg gttcgccacg gcatcgcccg
//
LOCUS       DATIFF010001196         5248 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_307047, whole genome shotgun sequence.
ACCESSION   DATIFF010001196 DATIFF010000000
VERSION     DATIFF010001196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5248
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_307047"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..133
                     /locus_tag="VLD58_17370"
     CDS             <1..133
                     /locus_tag="VLD58_17370"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HSB56137.1"
                     /translation="DAGADLRAVQELLGHASLSTTQIYTHTSVERLKKVYQQAHPRA"
     gene            148..681
                     /gene="hslV"
                     /locus_tag="VLD58_17375"
     CDS             148..681
                     /gene="hslV"
                     /locus_tag="VLD58_17375"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013939585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HSB56138.1"
                     /translation="MEQYHGTTILAVRKNGRVALGGDGQVSIGDTIVKANATKVRALK
                     GGKVLAGFAGSVADAITLYEKFEEKLERHPGNLGRAAVELAKDWRSDRVLRRLEALLV
                     VSDLEHTYLLSGGGELIEPDDGILAVGSGGNYALAAARALAPLPDLSARDVVQRALEI
                     AADICVFTNRNLTILEL"
     gene            737..1699
                     /locus_tag="VLD58_17380"
     CDS             737..1699
                     /locus_tag="VLD58_17380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56139.1"
                     /translation="MRPLLISSALLVAACTGAARDVPVDQPPAQAAALPADAGLTPGV
                     CGPWETADSASRATCRKRIFPPGSGDLDMLASADCTYDETTSLDSLRACLGRMDSSAR
                     QCPVVQSWPVRQGDGISRVAEWRRCGVQGGEYRGDSIAWPLHFLIIRRDTVALGPAIF
                     SYSNSAEPGSGGLDTALVVDLDGDGSDELVFVGQVYGTGAIFEECTLAVVERTFRCWS
                     GPEFPPRGTALREGEVLMKGWLRSFGPPGADRETAGPAYATGKSLWYETPVYREGDPN
                     CCNSTLASLWVEAVPAKGRFETGRWLRVTEDSNQAIVRIDTLRH"
     gene            1743..3236
                     /gene="hslU"
                     /locus_tag="VLD58_17385"
     CDS             1743..3236
                     /gene="hslU"
                     /locus_tag="VLD58_17385"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HSB56140.1"
                     /translation="MTGSHAAPLPPEAPEQLPPPPWLEELPPRQIVAELDRYIVGQEQ
                     AKRAVAIAIRNRWRRAQTADEIRDEITPYNIILIGPTGVGKTEVARRLARLAGAPFVK
                     VEASKFTEVGYVGRDAESMVRELVDAAISMVRTEREEDVYPTAEQRAEERLLDILLPP
                     PTPLRMERTPEGSEKGDRPGIFVVAPGGPARQEQPQPEEERRTRSREKLRQMLRDGKL
                     DEREVEIEVTPQGYPMLDMIQPPQTMEGEQINFMEMLQDMMPRRKKRRTVRIPEARRI
                     LVDEELKKLVDVDDVVNDALDRVENHGILFIDEIDKIAGERGPAGHGPDVSREGVQRD
                     LLPIVEGSTVQTRYGYVRTDHILFIAAGAFHVSKPSDLIPELQGRFPIRVELSPLTEA
                     DFVRIMTEPENALTKQYKALVAAEGAELDFTEDGIAEVARVAWLANDRMENIGARRLH
                     TVMSTLMDEVLFELPDYPVRKILFNREAVRARLEKIVDDDDLRRYIL"
     gene            3205..4047
                     /locus_tag="VLD58_17390"
     CDS             3205..4047
                     /locus_tag="VLD58_17390"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HSB56141.1"
                     /translation="MTTISGATSSEFSAELTAARDAALAAGTLRGAEAGRAHQASVKE
                     DGSPVTALDLEADRIIQNRLRAAFPRDLIVTEESGAEPPADGSRFWLIDPLDGTRDFA
                     AGSPEFAVHIALIQEGSPLVAVVHQPATGALFEAVRGAGAWRIEPTGVPVRLSVSARA
                     SLAELRIGISRRSPGERLTRLLAESQLGTGAVPLGASLKLTAVAAGELDATLCLHQRE
                     KSWDTAAPGLIVTEAGGRITDIDGRPFVYGAGDQAHHRGIVTSNGRCHEALTALAARY
                     WPRA"
     gene            4001..4621
                     /locus_tag="VLD58_17395"
     CDS             4001..4621
                     /locus_tag="VLD58_17395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56142.1"
                     /translation="MRPSLPSQRDTGPEPDPGVLLVDGIDGSGKTWFAGRLVDAMRAA
                     GAEVELAHVDDYRCPVSWNDPAGEAAVYWERYFDLVALERDLAALARPGLIVVLEGIF
                     TLRVPALAAAPLVYLEVDYEVAAERILRRDTAIGRTAEDVRHRIEARYFPAQRRYRAE
                     YAPTERASALVDSTDPACPRLIRSDWSRLPAPAVLALRQLFPVFAG"
     gene            complement(4625..5035)
                     /locus_tag="VLD58_17400"
     CDS             complement(4625..5035)
                     /locus_tag="VLD58_17400"
                     /inference="COORDINATES: protein motif:HMM:NF016211.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HSB56143.1"
                     /translation="MRDYSAEVRLANNRVARFWYLSGGHVSVGLAVLGVFLPLLPTTP
                     FLLLAAGCYARGSVRFYNWLLNSATFGPIIRNWREHRSVAPRHKIMAITVIVLSIGSS
                     VIFFVPNIYGKIALSLLGVGWVVVMLRLPTRYEP"
BASE COUNT          870 a         1765 c         1790 g          823 t
ORIGIN      
        1 cgatgcgggg gccgatctcc gggcggtgca ggagttgctg ggccacgcca gtctcagcac
       61 cacccagatc tacacccaca ccagtgtgga gcggctcaag aaggtctatc agcaggccca
      121 tccccgggcc tgacaaggag cgattctgtg gagcaatacc acggcaccac gatcctggcg
      181 gtccggaaga acggcagggt tgcactgggc ggcgacgggc aggtgagcat cggcgatacc
      241 atcgtcaagg ccaacgcgac caaggtccgc gcgctcaagg gtgggaaggt gctggccggc
      301 ttcgccggat cggtcgccga tgccattacg ctctacgaga agttcgagga gaagctcgag
      361 cgtcatccgg gcaatctcgg ccgcgccgcg gtggagctcg ccaaggactg gcggagcgac
      421 cgggtgcttc gccggctgga ggcattactg gtagtgagcg atctcgagca cacctatctc
      481 ctgtcgggcg gcggcgagct gatcgaaccg gacgatggca tcctcgccgt aggctcaggg
      541 ggcaactacg cgctggccgc ggcccgggcg ctcgcgccac tgcccgatct gagcgcgcgc
      601 gacgtggtgc agcgcgccct cgagatcgcg gccgatatct gcgtcttcac caatcgcaac
      661 ctcacgatcc tcgagctgta aaaccggccg ggccgctgtg cgtaggggca ctcgggagcc
      721 cgatactcct gccaccatgc gaccactcct catctcctcg gctctgcttg tcgctgcctg
      781 caccggcgcg gcacgggatg ttcccgtcga ccagccgcca gcccaggcgg ccgcgttgcc
      841 agcggacgcg ggactcacac ccggggtctg tggcccctgg gaaacggccg actccgcctc
      901 ccgcgcgacg tgccgcaagc ggatcttccc tcccggttcc ggcgacctcg acatgctggc
      961 ctccgccgac tgcacctatg acgagaccac ctccctggat tcactccggg cctgcctcgg
     1021 ccggatggat tccagcgccc ggcaatgtcc ggtggtgcag tcatggccgg tgcggcaggg
     1081 cgatggcatc agtcgcgtag ccgagtggcg gcggtgcggg gttcagggcg gggagtatcg
     1141 gggcgacagt atcgcctggc cgcttcactt cctgatcatt cgtcgagata cggtggcgct
     1201 tggacccgcg atcttctcct actcgaacag cgcggagcct gggagcggcg gcctcgatac
     1261 cgcgctggtg gtcgacctcg atggcgacgg ctccgatgag ctggtgtttg tgggtcaggt
     1321 ctacggtacc ggagcgatct tcgaggagtg caccctggcg gtggtggagc ggaccttccg
     1381 ttgctggagc ggccccgagt ttccgccgcg gggtaccgcc ctcagggagg gagaggtcct
     1441 catgaagggc tggctgagga gcttcggacc gccgggcgcc gatcgggaga ctgccggccc
     1501 ggcgtacgcc accggcaaga gcctctggta cgagaccccg gtctaccggg aaggggaccc
     1561 caactgctgc aactctaccc tcgcttcttt gtgggtcgaa gccgttccag ccaagggccg
     1621 gttcgagacc ggccgctggc tccgggtgac cgaagacagc aaccaggcca tcgtgcgcat
     1681 cgacaccctg cgtcactaga ctcggcttcg gcccgggtgg gccccccggt ttagattctg
     1741 gcatgactgg ttctcacgcc gcgccgttgc cgcccgaagc ccccgaacag ctccctccgc
     1801 cgccctggct cgaggagctg ccgccccgtc agatcgtggc ggagctggac cgctacatcg
     1861 tggggcagga acaggccaag cgcgcggtag ccatcgcgat ccgcaaccgc tggcgccggg
     1921 ctcagactgc cgacgaaatc cgggacgaga tcacccccta caacatcatc ctgatcggcc
     1981 ccaccggcgt cgggaagacc gaggtcgccc gccggctggc ccgcctggcc ggagcgccgt
     2041 tcgtcaaggt cgaagcctcg aagttcaccg aggtcggcta cgtcgggcgc gatgcggaat
     2101 cgatggtccg ggaactggtc gatgcggcta tcagcatggt gcgcaccgag cgggaagagg
     2161 atgtctaccc cacggccgag cagcgggccg aggagcgcct cctcgacatc ttgctcccac
     2221 cgcccacgcc gcttcggatg gagcgcaccc ctgaggggtc tgagaagggc gatcggccgg
     2281 gcatcttcgt ggtggcgccc ggcgggccgg cccgccagga gcagccccag ccggaggagg
     2341 aacgccgcac ccgatcacgg gagaagctcc gccagatgct ccgtgacggc aagctggacg
     2401 agcgcgaggt ggagatcgag gtgacgccgc agggctaccc gatgctcgac atgatccagc
     2461 ctccccagac catggaaggg gagcagatca acttcatgga aatgctgcag gacatgatgc
     2521 cgcggcggaa gaagcgccgc acggtccgca tccccgaggc tcgccgtatc cttgtcgacg
     2581 aggagctcaa gaagctggtc gacgtggacg acgtggtgaa cgatgccctc gaccgggtgg
     2641 agaaccatgg catcctgttc atcgacgaga tcgacaagat cgcgggcgaa cggggccccg
     2701 cggggcatgg acccgatgtc tcacgtgaag gggtccagcg cgacctgctt cccatcgtcg
     2761 agggctcgac ggtgcagacc cgttacggct atgtccgcac cgatcacatc ctgttcattg
     2821 ccgccggggc gttccacgtc tcgaaaccgt ccgatctgat ccccgagctc cagggacgtt
     2881 ttcccatccg ggtggagctg tcgccgctca ccgaggcgga cttcgtccgg atcatgaccg
     2941 agccggagaa cgcgcttacc aagcagtaca aggccctggt cgcggcggag ggggcagagc
     3001 tcgatttcac ggaggacggc atcgccgaag tggcgcgggt ggcgtggctc gccaacgacc
     3061 ggatggagaa catcggggcc cgccggctgc acaccgtgat gagcaccctg atggacgagg
     3121 tgctgttcga gctgccggat taccccgtgc gaaagatcct tttcaatcgc gaggcggtgc
     3181 gcgcccggct cgagaagatc gtggatgacg acgatctccg gcgctacatc ctctgagttc
     3241 tccgccgagc tgaccgccgc gcgcgatgcg gcgctggcgg ccggcacgct ccgcggcgcc
     3301 gaggccggcc gggcccatca ggcctctgtc aaagaggatg gcagcccagt caccgcgctc
     3361 gacctcgagg cggaccggat catccagaac cggctccgcg ccgcgtttcc acgcgacctg
     3421 atcgtcaccg aagaatccgg cgcggagccg cccgcggacg gttcccgctt ctggctcatc
     3481 gatccgctgg acggcacccg ggactttgcc gccggctctc ccgaattcgc ggtgcacatt
     3541 gcgttgatcc aggagggctc ccccctggtc gccgtggtgc atcagcctgc caccggggcg
     3601 ctcttcgagg ctgtgcgggg cgccggcgcc tggcggatcg agccgaccgg cgtgccggtc
     3661 cggctcagcg tctcggcgcg agcgtcgctg gccgagcttc ggatcggtat cagccgccgc
     3721 tcccccggtg aacgcctgac ccggttgctg gccgagtcgc agctcggcac cggtgcggtg
     3781 ccactggggg catcactcaa gctcaccgca gtggccgctg gagaactgga cgccaccctc
     3841 tgcctccacc agcgggagaa gagctgggat accgcggcgc cgggactcat cgttaccgag
     3901 gccggcggac ggatcaccga tatcgatgga cgaccgttcg tctacggcgc gggagaccaa
     3961 gcgcaccatc gcgggatcgt cacctccaac ggacgctgtc atgaggccct cactgccctc
     4021 gcagcgcgat actggccccg agcctgaccc cggcgtgctg ctggtggacg gcatcgacgg
     4081 gagcgggaag acatggttcg ccgggcgcct ggtggacgcc atgcgcgccg cgggcgccga
     4141 ggtggaactg gcgcacgtcg atgactatcg ctgtccggtg tcgtggaatg accccgccgg
     4201 cgaggcagcg gtctactggg agaggtactt cgacctggtg gccctggagc gggacctggc
     4261 cgcactggcc cgccccggtc tcatcgtcgt gctcgagggg atcttcaccc tgagggtgcc
     4321 ggcgctggcg gccgcgccgc tggtatatct cgaagtggac tacgaggtgg cggccgaacg
     4381 gatcctgcgc cgcgacacgg cgatcggacg gactgccgag gacgtgcggc accggatcga
     4441 ggcccgctac ttcccggctc agcgccgcta ccgtgccgaa tacgctccca ccgagcgcgc
     4501 cagcgcgctg gtcgacagta ctgaccccgc ctgccccagg ctcattcgga gcgactggtc
     4561 gaggctgcca gccccagctg tcctggcgtt gcgccagctg ttcccggtct tcgccgggta
     4621 accgtcaggg ctcgtaacga gtgggcagcc gcagcattac gacgacccag ccgacaccga
     4681 gcaggctcag tgcgatcttg ccgtagatgt tggggacgaa gaagatcacc gagcttccga
     4741 tcgagagcac aatgacggtg atcgccatga tcttgtggcg cggggcgacc gagcggtgct
     4801 cgcgccagtt gcggatgatc gggccgaaag tcgcgctgtt gagaagccag ttgtagaacc
     4861 gcaccgagcc ccgggcgtag caaccggccg cgagcagcag gaatggggtg gtgggcagga
     4921 gcgggaggaa gaccccgagc acagcgagtc caacgctgac atgcccgccg gagaggtacc
     4981 agaagcgggc gacgcggttg ttcgcgaggc ggacctcggc actgtagtcc cgcatcgggc
     5041 tactgccttc catttccaag tttcccagtc ggatttccgg aatactcgcc gcatcggaag
     5101 gtcagcacca gcccaccaaa cttggtagtg ctcggctggt ggtcttgccg cccgaagtgc
     5161 cccccactag actcccgggc ctgccaaaat ggctgaaggc ctctccgttc ggctcccaac
     5221 ctggatcgtg cttccatgac tgcccctg
//
LOCUS       DATIFF010001197         1427 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_152498, whole genome shotgun sequence.
ACCESSION   DATIFF010001197 DATIFF010000000
VERSION     DATIFF010001197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1427
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152498"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..230
                     /locus_tag="VLD58_17405"
     CDS             <1..230
                     /locus_tag="VLD58_17405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56144.1"
                     /translation="LSPDGVAIFLAPGAEARKLPFKGFVGQDAFIGTEALMIAFEGEP
                     SAWQVAMPTRNDLTLTTNDSYAAVLTFRRER"
     gene            244..741
                     /locus_tag="VLD58_17410"
     CDS             244..741
                     /locus_tag="VLD58_17410"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HSB56145.1"
                     /translation="MAASIRATDEIQVTAPPAAVYRVLTDFEQYRKWWPAAVRVRALS
                     VVPEVVGSDLEFHPRGGPAFRCRVEQAIPDSLLSLRYHEGPYAGLGVWSLEPVTGGTR
                     VRYSVDLTSEHRLLRFFAKFTNLGRSHSRLMRPVLAGLRRAVASATGGAGRRRDGEAD
                     PLNLI"
     gene            822..>1427
                     /locus_tag="VLD58_17415"
     CDS             822..>1427
                     /locus_tag="VLD58_17415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56146.1"
                     /translation="MSRLSSGLALACRVAPALFAAPALVQAQAPASAAQAPAPGAGPF
                     DGLRFRSIGPATPSGRIDDFAVYDRNPAIFYVAAATGGLWKTVNMGTTFEPVFDNEAS
                     VSIGDVAIAPNDPNVVWVGTGENNNRQSSSWGDGVYKSTDGGKSWKNMGLRESKQVAR
                     IVVDPVDNEVVYVAALGDLWKDGGERGIYKTSDGGLTWTPVL"
BASE COUNT          205 a          507 c          477 g          238 t
ORIGIN      
        1 agctcagccc ggatggcgtg gccatcttcc tggcgccagg cgccgaagcc cgcaagcttc
       61 cgttcaaggg cttcgtgggc caggacgcct tcatcggcac ggaggcgctg atgatcgctt
      121 tcgagggtga gcccagtgcc tggcaggtcg cgatgccgac ccggaacgac ctgacgctga
      181 cgaccaacga cagctacgcc gcggtgctga cgttccggcg ggagcgttag ccgccggtcc
      241 ccgatggccg cgtccatcag ggccacggac gagatccagg tcacggcgcc tcctgccgcg
      301 gtctatcgcg tgctgaccga tttcgagcag taccggaagt ggtggccggc ggccgtcagg
      361 gtccgtgccc tttccgtcgt ccccgaggtg gtgggatcgg acctggagtt tcatccgcgt
      421 ggcggtcccg cgttccgctg ccgggtggaa caggccattc cggattcgct gctttctctt
      481 cgctaccacg agggtcccta tgccggcctc ggcgtctggt ccctcgagcc ggtcaccggc
      541 ggcacccggg tgcgatactc ggtggacctg acctccgaac accgcctgct ccgtttcttc
      601 gcgaagttca ccaacctcgg ccgttcccac tcccggctga tgcggccggt gctggcgggc
      661 ctccggcggg cggtggccag cgccaccggc ggagcggggc ggcggagaga tggggaggca
      721 gacccgctca acctgatcta gcggggtcag cattcggcca gcctcgcacg tacaattcag
      781 cattccgtcc catcaccatc ccggtccccg gagattgtcc cgtgtcccgt ctctcttccg
      841 gtctcgctct cgcctgccgc gtggcgccgg cgctcttcgc ggctcccgcg ctggtccagg
      901 ctcaggcccc cgcttcggcc gcgcaggccc ccgcacccgg cgccggtccc tttgacggtc
      961 tccggttccg cagcatcggt ccggccacac ccagcggccg catcgacgat ttcgcggtct
     1021 acgaccggaa cccggcgatc ttctacgtcg ccgcggccac gggcggtctc tggaagaccg
     1081 tcaacatggg gacgaccttc gagccggtct tcgacaacga agcctcggtc tcgatcggcg
     1141 acgtggcgat cgcgcccaac gaccccaacg tggtctgggt gggcaccggc gagaacaaca
     1201 accgccagag ttcgtcctgg ggcgacggcg tctacaagtc gacggacggc ggcaagagct
     1261 ggaagaacat ggggctccgg gagtcgaagc aggtcgcccg gatcgtggtg gaccccgtgg
     1321 acaacgaggt cgtttacgtc gcggccctcg gcgacctctg gaaggacggc ggcgagcggg
     1381 gcatctacaa gaccagcgac ggcggcctca cctggacccc ggtgctc
//
LOCUS       DATIFF010001198         3760 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_152798, whole genome shotgun sequence.
ACCESSION   DATIFF010001198 DATIFF010000000
VERSION     DATIFF010001198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3760
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152798"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..342
                     /locus_tag="VLD58_17420"
     CDS             <1..342
                     /locus_tag="VLD58_17420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylpyruvate dioxygenase"
                     /protein_id="HSB56147.1"
                     /translation="QHVAIATDNIIATVSALRERGVDFLTVPATYYETVLDRVGEIDE
                     NLEPLRELGILIDRDDEGYLLQIFTKPVQDRPTVFYEIIQRKGAKSFGKGNFKALFEA
                     IEREQALRGNL"
     gene            342..1535
                     /locus_tag="VLD58_17425"
     CDS             342..1535
                     /locus_tag="VLD58_17425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HSB56148.1"
                     /translation="MPFYHTIGQIPRKRHTVFRRPDGGLYAEELMGHEGFVGTSSLLY
                     HTYPPTTVKSARRIRDVRWEADDDTSLRHRHFLTSKARKGGSPTLDRIPLLFNSDIGM
                     LYVWADENDAHFYRNSQADECIYVVEGKGVLESVFGDMPFQPGDYVVIHRNILHRWRI
                     DLAAGPARFVVFESRGHIRFPKRYKNDFGQLLEGAPFSERDIRRPMELRPHDEKGDFP
                     LLVKQYDAINELVLDHHPFDVVGWDGYFYPWIFNIHDFEPIVGRIHQPPPVHQTFQGD
                     GFVICSFCPRPYDFDPNAVPAPYNHSNVDSDEVLFYASSEFMSRKGIEYGSITHHPDG
                     LPHGPHPGRAEASIGAKATNELAVMMDSFRPLKVAKSAMAFEDPTYHKSWLDAQHAQF
                     NPPTT"
     gene            1532..3511
                     /locus_tag="VLD58_17430"
     CDS             1532..3511
                     /locus_tag="VLD58_17430"
                     /EC_number="6.2.1.16"
                     /inference="COORDINATES: protein motif:HMM:NF002937.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030729 - acetoacetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019287 - isopentenyl diphosphate
                     biosynthetic process, mevalonate pathway [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetate--CoA ligase"
                     /protein_id="HSB56149.1"
                     /translation="MTQAATPLWSPTPEAVRRANLTRFTARFRPGADYQQLHRWSVEQ
                     PEEFWPAVWEFGEVVADRDAGGRQWRAVLDGGGRMAPPDPAEGPRWFHGARLNFAENL
                     LRHGDDRLALVWWSETGRQGSLSFAALRGEVARWQVALRADGVGVGDRVAGLLPNCPE
                     AVIAMLATTSLGAIWSSCSPDFGEGAVLDRFGQIAPTVFVSAARCLYNGKQADLRPRL
                     ANVAAKLPATRRIVVVGSTEPASPLPGDARATWLSAWLPAVAPAAPDFVRLPFDHPVY
                     ILYSSGTTGLPKAIVHGAGGTLLQHLKELMLHTDLTREDRIFYYTTCGWMMWNWLVTS
                     LAVGATVVLYDGAPMAPRPDILWDLAEQERVTVFGTSAKYLALCEKAPLEPARTHQLP
                     ALRAILSTGSPLAQHSYDYVYSRIKRDVHLASISGGTDIVSCFALGNPTAPVWRGELQ
                     CRGLGMAVDVFDPAGKPVVGAPGELVCTRPFPSMPVAFWDDPDGRKYRAAYFEHFPGV
                     WRHGDWAELTGHDGLIIYGRSDATLNPGGVRIGTAEIYRQVERLPEIVESLVIAQEWE
                     NDVRVVLFVRLRDGLVLDEALRERIRKEIRAHASPHHVPRKILQVPDLPRTINGKLSE
                     LAVRAAVHGRAIGNRDALANPQALDLFRNLPELAV"
     gene            3508..>3760
                     /locus_tag="VLD58_17435"
     CDS             3508..>3760
                     /locus_tag="VLD58_17435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56150.1"
                     /translation="MSTIERALLTGLVDYAGLFPPAGLSMRETMANFAAYQTRPDAYA
                     LARMVVPVSRLFEFEETWAGLDASARAARWPVSALAGADV"
BASE COUNT          594 a         1313 c         1233 g          620 t
ORIGIN      
        1 cagcatgtcg ccatcgcgac cgacaacatc atcgccacgg tgagcgccct gcgcgaacgg
       61 ggggtcgact tcctgaccgt gccggcgacc tactacgaga cggtgctcga ccgggtgggc
      121 gagatcgacg agaatctcga gccgctccgc gagctcggca tcctgatcga ccgggacgac
      181 gagggctacc tgctgcagat cttcaccaag ccggtccagg accgccccac ggtgttctac
      241 gagatcatcc agcggaaggg cgccaagagc ttcggcaagg gcaacttcaa ggcgctgttc
      301 gaggccatcg agcgggaaca ggctctgcgg gggaacctat aatgccgttc taccacacca
      361 ttggccagat cccgcggaag cgtcacaccg tcttccgccg tcccgacggc gggctctacg
      421 ccgaagagct gatgggccac gagggcttcg tgggcacctc gtcgctgctc tatcacacct
      481 atccgcccac caccgtgaag tcagcccggc ggattcgcga cgtgcgctgg gaggccgatg
      541 acgacacctc cctccggcac cgtcacttcc tcaccagcaa ggcccggaag ggcgggagcc
      601 ccacgctcga ccggatcccg ctcctcttca acagtgacat cgggatgctg tacgtctggg
      661 ccgacgagaa cgatgcccac ttctaccgca attcccaggc ggatgagtgc atctacgtcg
      721 tggaggggaa gggagtcctc gagtcggtct tcggggacat gccatttcag cccggcgact
      781 acgtcgtgat tcaccgcaac atcctgcacc gctggcgcat cgacctcgcg gccgggcccg
      841 cgcggttcgt ggtgttcgag agccggggcc acatccgctt ccccaagcgg tacaagaacg
      901 acttcggcca gctgctcgaa ggcgcgccct tctcggagcg tgatattcgc cgcccgatgg
      961 agctccggcc gcacgatgag aagggtgact ttccgctcct ggtcaagcag tatgacgcga
     1021 tcaacgagct ggtgctcgat caccacccgt tcgacgtcgt cggctgggac gggtacttct
     1081 atccctggat cttcaacatc cacgatttcg agccgatcgt gggacggatc caccagccgc
     1141 ccccggtgca ccagaccttt cagggcgacg gcttcgtgat ctgctcgttc tgtccccggc
     1201 cgtacgactt cgatcccaac gccgtccccg cgccctacaa ccacagcaac gtggattcgg
     1261 acgaggtgct cttctacgcc tcgagtgagt tcatgagccg gaaggggatc gagtacggct
     1321 cgatcaccca tcatcccgac ggacttcccc acggtcctca tccgggcagg gccgaagcct
     1381 cgatcggggc caaagccacc aacgagctgg cggtgatgat ggattcgttc cgcccgctca
     1441 aggtggccaa gtcggcgatg gcgttcgagg accccaccta ccacaagtcg tggctcgacg
     1501 cccagcacgc ccagttcaac ccgccgacga cgtgacccaa gcggccaccc cgctctggag
     1561 ccccaccccc gaggcggtgc gccgggccaa cctgacccgg ttcaccgccc ggttccgtcc
     1621 gggcgccgac taccagcagc tgcaccgctg gtcggtggag cagccggagg agttctggcc
     1681 ggcggtgtgg gagttcggcg aggtggtggc cgaccgggac gcgggcggcc gccagtggcg
     1741 cgccgtgctc gatggcggcg ggcggatggc gcccccggat ccggccgagg ggccgcggtg
     1801 gttccacggc gcgcggctca attttgccga gaatctgctg cgtcatggcg atgaccgatt
     1861 ggcactggtc tggtggagtg agaccggacg tcagggcagc ctgagcttcg cggcactccg
     1921 cggcgaggtg gcgcgctggc aggtggcgct gcgagccgac ggggtagggg tcggcgatcg
     1981 cgtcgccggg ctgctgccca attgtcccga ggctgtcatc gccatgctgg cgaccacgtc
     2041 actcggcgcc atctggtcgt cctgctctcc cgactttggc gaaggcgcgg tgctcgaccg
     2101 gttcgggcag atcgccccca cggtgttcgt gagcgccgcc cgctgtctct acaacggcaa
     2161 gcaggccgac ctgcggcctc ggctcgccaa tgtcgcggcg aagctccctg cgacgcgccg
     2221 catcgtggtc gtgggttcca cggagccggc ctcgccgctc cccggcgatg cccgtgccac
     2281 ctggctcagc gcctggctgc cggccgtggc gccggcggcg cccgacttcg tgcggctccc
     2341 cttcgatcac ccggtctaca tcctctactc gagcggcacc accggacttc ccaaggccat
     2401 tgtgcacggc gccggcggga cgctgctgca gcatctcaag gagttgatgc tgcacaccga
     2461 tctcacccgc gaggaccgga tcttctacta caccacctgc gggtggatga tgtggaactg
     2521 gctggtgacc agtctcgcgg tgggcgcgac cgtggtgctg tacgacggcg cgcccatggc
     2581 gccgcggccg gacatcctct gggacctggc cgagcaggag cgggtgacgg tcttcggaac
     2641 cagcgccaag tacctggccc tttgtgagaa ggcgccgctc gaaccggcgc ggacgcacca
     2701 gctgcccgcg ctgcgcgcca ttctctccac cggaagcccg ctggcccagc acagctacga
     2761 ctacgtctac agccgcatca agcgcgatgt ccacctcgcc agcatcagcg gcgggaccga
     2821 catcgtctcc tgctttgcgc tcggcaatcc cacagccccg gtctggcgtg gcgagctcca
     2881 gtgccgaggc ctcgggatgg cagtcgatgt attcgatccc gccggcaagc ccgtcgtcgg
     2941 cgcaccgggg gaactggtgt gcacccggcc ctttcccagc atgccggttg ccttctggga
     3001 tgatcccgac ggccggaagt atcgggccgc gtacttcgag catttccccg gcgtctggcg
     3061 ccacggcgac tgggccgagc tgaccgggca cgatggcctg atcatctacg gccggagcga
     3121 tgccacactc aatccgggcg gagtccggat cgggacggcg gagatctacc gccaggtgga
     3181 acggctcccg gagatcgtgg agagcctggt gattgcgcag gagtgggaga acgatgtgcg
     3241 ggtggtgctt tttgtccggc tccgcgacgg gctggtcctc gacgaggcct tgcgggagcg
     3301 gatccggaag gagatccggg cccacgcgag cccccatcac gtcccccgga agattctcca
     3361 ggttccggac cttcctcgca cgatcaacgg caagctgagc gaactggccg tgcgcgcggc
     3421 cgtgcatgga cgcgccatcg gcaaccgcga tgcgctcgcg aacccgcagg ccctggatct
     3481 cttccggaat ctcccggagc tcgccgtatg agcaccatcg aacgcgcgct cctcaccggc
     3541 ctggtggatt atgccggact cttcccgccg gccgggctct cgatgcggga gacgatggcc
     3601 aacttcgccg cctaccagac gcgcccggac gcctacgcgc tggcccgcat ggtcgtcccg
     3661 gtgagccgtc tgtttgagtt cgaggagacc tgggccggtc tcgatgcctc cgcccgcgcg
     3721 gcccgctggc cggtctcggc gctggcaggc gcggacgtcg
//
LOCUS       DATIFF010001199         1377 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_920223, whole genome shotgun sequence.
ACCESSION   DATIFF010001199 DATIFF010000000
VERSION     DATIFF010001199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1377
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_920223"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(80..394)
                     /locus_tag="VLD58_17440"
     CDS             complement(80..394)
                     /locus_tag="VLD58_17440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56151.1"
                     /translation="MSRMGRVLTAARATVPAEHAAEYLAALRELQACRHRRGEHLWVF
                     RHPREAGVFLEFAESASADTHPLTGAEPPEERSLELRLQALAAYAPDARVLWEEIPLE
                     EP"
     gene            complement(391..>1377)
                     /locus_tag="VLD58_17445"
     CDS             complement(391..>1377)
                     /locus_tag="VLD58_17445"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HSB56152.1"
                     /translation="PVGGEESLEERLRRKSTPLVRKIAAEHNLDISGIAGSGLSGRVT
                     KNDVLAFIEAGVPAPAGAPATAAPARRLAAPDLTLSDGVRVIPGPVVEPWEGDRVEPW
                     SRIRKLTADHMVMSRRVSAHVQSLIEIDYTRVAGLRARAKASYQERGVNLTFLAFIAS
                     AIAQNLRKHPLLNASVMGESTLFRRDINLGIAVALEWGLIVPVIRHADELNLLGTARA
                     INDLAERARSKKLSPDEVQKGTFTITNPGVFGTLVGLPVINQPQSAILAVGSIEKRPA
                     VITGPDGTDAIGIRTTGLLAMSFDHRIVDGADADRFLADVRKTLEEFPETAV"
BASE COUNT          210 a          472 c          484 g          211 t
ORIGIN      
        1 ttcccatact gggtgatgcg cccggtgggc gacacccccc atcgcacccc gtccaccacc
       61 acgattcgtc cggccattct cagggttcct ccagcggaat ctcttcccag agcacccggg
      121 catcgggcgc gtaggcggcg agagcctgca gcctcagctc gagggagcgc tcttccggcg
      181 gctctgcgcc cgtgagggga tgggtgtcgg ccgaggcgct ttcggcaaac tcgagaaaga
      241 cccccgcttc ccggggatgc cggaagaccc agagatgctc cccccgtcgg tggcggcatg
      301 cctggagctc gcgaagcgcc gcaaggtact cggcggcgtg ctccgccgga acggtggccc
      361 gcgcggcggt cagcacccgg cccatccggc tcacaccgcc gtctcgggaa actcctcgag
      421 cgtcttccgc acatcagcga ggaagcgatc ggcgtccgcg ccatccacga tccgatggtc
      481 gaaggacatc gcgagcagcc cggtcgtccg gatgccgatg gcatcggtgc cgtcgggtcc
      541 ggtgatgacc gccggccgct tctcgatcga tccgaccgcg agaatcgccg actggggctg
      601 gttgatgacc ggcagcccga cgagcgtgcc gaagacgccc gggttcgtga tggtgaaggt
      661 gcccttctgg acctcgtcgg gcgagagctt cttgctccgg gcgcgctccg cgagatcgtt
      721 gatcgcccgt gccgtgccga gaaggttgag ctcgtcggca tggcggatga ccggcacgat
      781 gagcccccac tcgagcgcca ccgcgatgcc gaggttgatg tcgcgccgga acagggtgct
      841 ctcgcccatg accgaggcat tgagcagggg atgcttccgg agattctgcg cgatcgcgga
      901 ggcgatgaag gcgaggaagg tgaggttgac gccccgctcc tggtaggacg ctttcgccct
      961 ggcgcggagg ccggccaccc gggtgtagtc gatctcgatg agcgactgca cgtgggccga
     1021 cacccgccgc gacatgacca tgtggtcggc ggtgagtttc cggatcctgg accagggctc
     1081 cacccggtcg ccctcccagg gctcgaccac ggggccggga atgacccgca cgccgtcgga
     1141 gagcgtgaga tcgggcgcgg cgagccggcg cgcgggcgcg gccgttgccg gagcaccggc
     1201 cggcgcgggc acaccggctt cgatgaaggc gagcacgtcg ttcttggtga cgcggccgga
     1261 caaccccgat ccggcgatcc cggaaatatc gagattgtgc tccgcggcga tcttccggac
     1321 caggggcgtg gacttccgcc gcaggcgctc ctccagcgat tcctcgccac cgaccgg
//
LOCUS       DATIFF010001200         1192 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_153142, whole genome shotgun sequence.
ACCESSION   DATIFF010001200 DATIFF010000000
VERSION     DATIFF010001200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153142"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="VLD58_17450"
     CDS             complement(<1..280)
                     /locus_tag="VLD58_17450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56153.1"
                     /translation="MAGTGLLTGRSQTLTLTVGGPVELALLYWTGRDYPCPVDEPDSG
                     HCVLPTTGPYKDQVLSFDGVVTAGVLAGSEIQPDTNAGPVDNLGYFADV"
     gene            complement(512..>1192)
                     /locus_tag="VLD58_17455"
     CDS             complement(512..>1192)
                     /locus_tag="VLD58_17455"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSB56154.1"
                     /translation="LEAGVRKFVYCSTCGVHGNIDNPPGGEDAPIQPADYYQRTKYEA
                     EPLVREFHRRGLPAVILRPAAIYGPGDPERFLMIFRRVARGTFPMFGDGRTWYHPLYI
                     DNLIDAFVLAMADGVGDGEAYLIADEEYLEIEDLVRRVGRALGVDVKIPHYPVWPAVA
                     ASHVVEKACRPFGITPPIFPRRVEWYRQNRAFKIDKARRELGYEPKVGIDEGLRRTAD
                     WYRQEGYL"
BASE COUNT          200 a          394 c          404 g          194 t
ORIGIN      
        1 tgacgtccgc gaagtagccg aggttgtcga ccggaccggc gttggtgtcc ggctggatct
       61 cggagccggc caggacgccc gccgtcacca cgccgtcgaa cgagagcacc tgatccttgt
      121 aaggcccggt ggtggggagc acgcagtggc cgctgtccgg ctcgtccacc gggcaggggt
      181 agtcccttcc cgtccaatag agcagggcga gctccaccgg cccgccgacg gtgagagtca
      241 gggtctgcga ccggcccgtc agcaggccgg tgcccgccac ggcgatcgaa aggccaggcc
      301 cttgaagatc gaaggctgga tggagtggcg tcgccccggc cggcaagggg ccggacaaga
      361 gagccgccgc caggcagcag atggagggaa cggtcaacga gcgagaggtc tgcattttct
      421 ccctccagaa aactgaaggg agagcacagc aagttgtatg ccgtaattat ttgtgaatgt
      481 agataatcaa atcttcacgc ttcatccgtt tctagagata tccctcctgc cgataccagt
      541 ccgcggtgcg gcggagcccc tcgtcgatcc ccaccttcgg ctcgtacccc agctcccgcc
      601 gggccttgtc gatcttgaac gcccggttct gccggtacca ttcgacccgg cgggggaaga
      661 tcggcggcgt gatgccgaac ggccggcagg ccttctccac cacgtggctg gcggcgaccg
      721 ccggccagac cgggtagtgc gggatcttga cgtccacccc gagcgcccgc cccacccgcc
      781 tcaccaggtc ctcgatctcc agatactcct cgtcggcgat caggtaggcc tcgccgtctc
      841 ccaccccgtc cgccatggcg aggacgaagg cgtcgatcag gttgtcgatg tagagcgggt
      901 ggtaccaggt ccggccgtcg ccgaacatgg ggaaggtgcc gcgggccacc cggcggaaga
      961 tcatcaggaa gcgctcggga tcgccggggc cgtagatcgc ggccgggcgc aggatcaccg
     1021 cggggagccc ccgccggtgg aattcgcgca ccagcggctc cgcctcgtac ttggtgcgct
     1081 ggtagtagtc ggcgggctgg atgggcgcgt cctcgccgcc cggcggattg tctatgttgc
     1141 cgtgcacgcc gcaggtgctg cagtagacga acttgcgaac ccctgcttcg ag
//
LOCUS       DATIFF010001201         1718 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_2000054, whole genome shotgun sequence.
ACCESSION   DATIFF010001201 DATIFF010000000
VERSION     DATIFF010001201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 1718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2000054"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(98..1435)
                     /locus_tag="VLD58_17460"
     CDS             complement(98..1435)
                     /locus_tag="VLD58_17460"
                     /inference="COORDINATES: protein motif:HMM:NF018657.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004144 - diacylglycerol O-acyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WS/DGAT domain-containing protein"
                     /protein_id="HSB56155.1"
                     /translation="MATTSKDIATRSASTALAPTRVPVAPHDAIWLQDTPTNLMVING
                     VITTDRLDLATLRRVFQERVIDGAEGRFARFRQRVERSGGGWCWVDDPDFDIARHIFA
                     APSADIGTTEKLREYVGREASKPLPADRALWQFQLIEDFENGGSACLVRLHHCIGDGV
                     SLVTVIFHLMEEVAGHEGASPARIQPAAGRFGSKLVRAIQIPFAAPAILIARLLWIPD
                     RTVLHGPRVSGKKQVAWTEPLDLQVLKDIKNRLGATVNDVLMAAVSGALSRYIERRAG
                     QAIVRLRISMPVSIRNPAAKITLENRFAAVPLELPAGIAQARERVARVKERMDALKKS
                     VAPIVIYGIQSALLKVLPQAASRGLIDFLANKCTAVVTNVPGPQRGLTLGGARLRSLL
                     FWVPQRADIGVGISILSFAGKVQIGVLCDTEVVPDPMELVRAFEEELAALRAL"
BASE COUNT          253 a          606 c          569 g          290 t
ORIGIN      
        1 ccttgccgcc ttgccgcctt gccgccttgc cgccttgccg ccttgccgcc ttgccgcctt
       61 gccgccttgc cgcctgaccg cctgaccgcc tgaccgccta aagcgccctg agggccgcga
      121 gctcctcctc gaacgcgcgc accagctcca tcgggtcggg caccacctcg gtgtcgcaga
      181 ggacaccgat ctgcactttc cccgcaaaac tcaagatgga aatcccgacc ccgatgtcgg
      241 cccgctgagg cacccagaag agaagactcc tgaggcgcgc cccgccgagt gtgagtccgc
      301 gctggggacc gggaacgttg gtgaccaccg cggtgcactt gttggccagg aaatcgatca
      361 gtcctcggct cgcggcctgc ggcagcacct tgaggagcgc gctctggatc ccgtagatga
      421 cgatcggggc caccgacttc ttgagggcat ccatgcgttc cttgacgcgg gccacccgct
      481 cccgggcctg ggcgatgccc gccggcaatt cgagcggcac cgccgcgaat cgattctcca
      541 gggtgatctt cgccgccggg ttccggatgc tgaccggcat ggagatccgg agccgcacga
      601 tcgcctggcc ggcgcgccgc tcgatgtagc ggctgagcgc gccggaaacc gcggccatca
      661 gcacgtcatt caccgtcgcg ccgagccggt tcttgatgtc cttgaggacc tggagatcga
      721 ggggttcggt ccaggcgacc tgcttcttac ccgagaccct cggcccgtgg agaacggtcc
      781 ggtcgggaat ccagaggagc cgcgcgatga ggatcgcggg agccgcaaac gggatctgga
      841 tcgcccgcac cagcttgctg ccaaagcggc cggctgcggg ctggatcctg gcggggctcg
      901 ctccctcgtg cccggcgact tcctccatca gatggaatat caccgtgacg agcgagacgc
      961 catcgccgat gcagtggtgg agccggacca ggcaggcgct gccaccgttc tcgaagtctt
     1021 cgatcagctg gaactgccag agggcccggt ccgcgggcag gggcttcgag gcctcgcggc
     1081 cgacgtattc ccggagcttc tcggtggtgc cgatgtccgc gctgggggcg gcgaagatat
     1141 gccgcgcgat atcgaagtcg ggatcgtcga cccagcacca tcctcctccc gagcgttcga
     1201 cccgctggcg aaaccgggca aagcgcccct cggcgccgtc gatgacgcgt tcctgaaaga
     1261 cccggcgcag ggtggccagg tcgagccggt cggtggtgat cacgccattg atcaccatga
     1321 ggttggtggg cgtgtcctgg agccagatgg cgtcgtgcgg ggcgaccggc acgcgcgtcg
     1381 gcgccagcgc cgtgctggcg cttctggtcg cgatgtcctt gctggtagtt gccatatctg
     1441 taatcccgag cgaagaacaa ccggggagat tggcgtggtc gtggcgtcgc agcctcgtgg
     1501 ccgcgtgacg ctcgggtcga ggggaactct ccgcgggcct gaagttcgct ctcaggcgga
     1561 gccctcatag gggaagggct cacttacgcc ccgctccgtg acccctcgac cctcgcgcgc
     1621 cctgccggca cttccgccct gccgccttgc cgctctcccg cttaccgccg tcgcttcagc
     1681 cagtccgccg gatccagcgc gatcccgcgt tcgccccg
//
LOCUS       DATIFF010001202         2748 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1845357, whole genome shotgun sequence.
ACCESSION   DATIFF010001202 DATIFF010000000
VERSION     DATIFF010001202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 2748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2748)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2748
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1845357"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            240..1754
                     /locus_tag="VLD58_17465"
     CDS             240..1754
                     /locus_tag="VLD58_17465"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSB56156.1"
                     /translation="MRRTIPLHLLTAGALIAALAGCRSKDAETESASRNASDSAAAGA
                     SAENGGVIAVTTSSDEARELYLRGQAMGDHARVHDARELFQQAAAKDSNFALAHYGLA
                     TSSTGPGDFLSHLDQAVKLSDKASEGERLMIQSLQAGAAGDSKKSLEYTKELAAKYPR
                     DPRAHWLLGIGYLGMQEFDQAVGQLTKSTELDSSFAPAYNILGYTYMPQGKYAEAETA
                     FKKYIELVPDNPNPYDSYAEMLLRTGRFDESIAQYRKALSVDPNFSNSHIGIAGNLMF
                     QGKHDAAAAEAQKLYDAARDDGDRRTALLSRAVTAVDRGSTAQAIREMERLYALDAKA
                     GDTAAMANDGQQMGDILLAGGRADDAARRYQQALALVKGSGLSAEIKQFTELADHYNL
                     ARVAAAKGDAATAKAHADRFRTGAEATADVGRIRQAHELTGMIALQEKDFDAAVTHLG
                     QADQQDPYVLYYLATAYQGKGDAAKAKDYAKRAADMHILPTIRYALVRSKATKL"
     gene            complement(1793..2602)
                     /locus_tag="VLD58_17470"
     CDS             complement(1793..2602)
                     /locus_tag="VLD58_17470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56157.1"
                     /translation="MYYGDATETADIYTIGAGGGGLTRLTSWAGSEWDPTWSYDHQRL
                     AFVRIRSDANNVQHSDIYLMNGDGSNKHWARSAPSSYDVFEPSWSPDGKRLVFTLRIG
                     NGSTAYLATLNLATGIVDWVGSKGVVAVQGRHASYDPTGTSIIYLEPLGGAVHRLVPG
                     GSDVILLKSDWQIRDATLSPDGKRLAYSRLVTSTNPEIFVFDLTTKVSKRLTFYAGDD
                     IGATWSPDGTRIAFLSKRSGRYQVWSMSAATGGSLTQVTNVPGAEEPAWRH"
BASE COUNT          462 a          931 c          974 g          381 t
ORIGIN      
        1 gtcgtggtgg gacgggcggt ccggcgcgac gggtgagccg gcgaggatcg cccgggctga
       61 cctcgcggag cggcgctcgc gcgggagccc ccgcagataa gatgcttgac aggtcccgtc
      121 cccgcccgta gggtagcctc actccattcg atacctcatg ccgggccgct ctcagcggcc
      181 atactccagg tgcgccacca tcccgtccgg tttcaccggc cgtgcgcaag gaggccccca
      241 tgcgacgaac cattccactc cacctgttga ccgccggcgc actcatcgcc gcgctcgccg
      301 gttgccgctc caaggacgca gagaccgaaa gcgcgagccg gaacgcctcg gactcggcag
      361 ccgccggtgc ctccgccgag aacggcggcg tgatcgccgt gacgacctct tcggacgagg
      421 ctcgggagct gtacctccgc gggcaggcca tgggcgacca cgcccgggtc cacgacgccc
      481 gggagctgtt ccagcaggcg gccgccaagg attcgaactt cgccctggcc cactacggtc
      541 tcgcgaccag ctccaccggt ccaggggact tcctgagcca cctggaccag gcggtgaagc
      601 tctcggacaa ggcgtcggaa ggcgagcggc tgatgatcca gtcgctccag gccggtgccg
      661 ccggcgactc caagaagtcg ctggagtaca ccaaggagct ggcggcgaag tatccccgcg
      721 acccgcgggc acactggctg ctgggaatcg ggtatttggg gatgcaggag ttcgaccagg
      781 cggtcggcca gctcaccaag tccaccgagc tggactcgag cttcgcgccg gcctacaaca
      841 tcctgggcta cacctacatg ccgcagggca agtacgccga ggcggagacc gcgttcaaga
      901 agtacatcga gctggtcccc gacaacccga atccctacga ctcctacgcc gagatgctgt
      961 tgcggacggg gcggttcgac gaatccatcg cccagtaccg taaggcgctg tcggtcgacc
     1021 ccaacttcag caattcgcac atcggcatcg ccggcaacct catgttccag ggcaagcacg
     1081 acgccgccgc cgcggaggcg cagaagctgt acgacgccgc ccgggacgac ggcgaccggc
     1141 gcaccgcgtt gctgagccgg gcggtgaccg cggtggatcg gggcagcacg gcccaggcga
     1201 tccgggagat ggagcggctc tacgccctcg atgccaaggc cggcgacacc gccgcaatgg
     1261 ccaacgacgg ccagcagatg ggcgacatcc tcctcgccgg cggccgggcc gacgacgcgg
     1321 ccaggcgtta ccagcaggcg ctggcgctgg tcaagggctc cggtctgtcg gccgagatca
     1381 agcagttcac cgagctggcc gaccactaca acctggcccg ggtcgcggcg gcgaagggtg
     1441 acgcggcgac cgccaaggcg cacgcggacc ggttccggac cggggccgag gccaccgccg
     1501 acgtcggccg gatccgtcag gcgcacgagc tgaccgggat gatcgcgctg caggagaagg
     1561 atttcgacgc ggcggtcacc cacctgggcc aggccgacca gcaggatccc tacgtgctct
     1621 actatctggc gacggcctac caggggaagg gcgacgcggc caaggccaag gattacgcca
     1681 agcgggcggc ggacatgcac atcctgccga cgatcaggta cgcgctggtg cggagcaagg
     1741 cgacgaagct gtagcagggc gcgggaggga cgtccctccc gcgccattca gcctaatgcc
     1801 tccacgccgg ctcctcggca ccggggacgt tggtgacctg ggtgaggctg ccgccggtgg
     1861 cggcgctcat gctccagacc tggtagcgcc cggatcgctt gctcaggaac gcgatcctgg
     1921 tcccgtccgg ggaccaggtc gccccgatgt cgtcgccggc gtagaaggtg aggcgcttgc
     1981 tcaccttggt ggtcaggtcg aagacgaaga tctccggatt ggtgctggtg accagccggc
     2041 tgtaggcgag gcgcttgccg tcgggcgaga gggtggcgtc ccggatctgc cagtcgctct
     2101 tgaggaggat cacgtcgctg cccccgggga cgagccggtg caccgccccg cccaggggct
     2161 cgagatagat gatcgacgtc ccggtcggat cgtaggaagc gtggcggccc tgcacggcga
     2221 ccacgccctt cgaacccacc cagtccacga tgccggtggc cagattcagg gtcgcgaggt
     2281 acgcggtgct gccgttcccg atccgcaggg tgaacaccag gcgcttcccg tccggcgacc
     2341 aggagggctc gaacacgtcg tagctggacg gagccgaccg ggcccagtgc ttgttgctgc
     2401 catccccgtt catcaggtag atgtcggagt gctggacgtt gttggcgtcc gaccggatcc
     2461 gcacgaaggc cagacgctgg tgatcgtagg accaggtcgg gtcccactcc gagccggccc
     2521 agctggtgag ccgggtgagc ccgccaccgc cggcgccgat ggtatagatg tcggccgtct
     2581 cggtggcgtc accgtagtac atgaaggcga tccgggaggc gccgacggtc gccaggtcga
     2641 ccggtccggc gtcgggggcg gaagacgagg gatcgcccgg tctcctgagg cgcgagggtg
     2701 tccgcggcgt ggtcgcagcc ggggagcacc aggacgaggg agagggcg
//
LOCUS       DATIFF010001203         5014 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_1845462, whole genome shotgun sequence.
ACCESSION   DATIFF010001203 DATIFF010000000
VERSION     DATIFF010001203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 5014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5014
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1845462"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1403)
                     /locus_tag="VLD58_17475"
     CDS             complement(<1..1403)
                     /locus_tag="VLD58_17475"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB56158.1"
                     /translation="MPSPGPTPDPLFLSLQQALAGRYSIDHELGRGGMGIVYLAREVH
                     LDRLVAIKLLPPERAADPALRQRFLREARLAAKLSHPNIIPIHAVDETHGFVYYVMSY
                     IDGMTLAQRVQARGPLGGADGARILRETAWALAHAHAQGVIHRDVKPDNILLEGATGR
                     VVVVDFGIAAAGAVTTAEGPARPEATRTGTETLVPLAGTPEFMSPEQALGGAIDARSD
                     IYALGATAFYALSARLPFTGDTATEILAKHVTEPAPSLAGLGLAVPRKLALLVDRCLA
                     KEPEHRPASADLLAEQLGVALEQRRELPVALRAFVKRTGRIDGSGTMLYGLGLVVAST
                     VVSSFTGGWWGFGSFLFGLTAVPFGYLVAAARRLMLLGFTHGDLDPAFKSEIEQGREE
                     RAVEGLLRETRAERILRFVARGSGALAGLSLATMVSLALLPLPGARAAVMAMLQVFAF
                     STGASVLSMIGHLSLRHR"
     gene            1594..2022
                     /locus_tag="VLD58_17480"
     CDS             1594..2022
                     /locus_tag="VLD58_17480"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HSB56159.1"
                     /translation="MRFMMLVIPKATYDPATPGAAAAHPDLVAKMTKMMKYNDSLQKA
                     GVLLALDGLHSPAMGARVSFPGGSPQVTDGPFAEAKEVVGGYWMIQVKSREEAIEWAR
                     RAPMSPGDIIEVRQVHEQSEFPPEIQEAARQFHELQKHSR"
     gene            2044..3318
                     /locus_tag="VLD58_17485"
     CDS             2044..3318
                     /locus_tag="VLD58_17485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HSB56160.1"
                     /translation="MSDTHAAIDAVWRIESARVIAGLARIVGDVGIAEDLAQDALVAA
                     LEQWPQSGVPRNPGAWLMATGKHRALDVVRRRKMLERKHAQLGHELEARQEEMVPDLD
                     QALDDPIGDDLLRLMFTACHPVLSTESRVALTLRLLGGLTTGEIARAFLTAEPTVAQR
                     IVRAKRTLTEARVPFELPPPAELGARLESVLGVIYLIFNEGYAASSGEDWVRPALCED
                     ALRLGRILAELAPGEPEVHGLVALMEIQASRFAARTGPTGEMILLLDQDRSRWDHLLI
                     RRGLAALERAESLGVGLGPYGLQAAIAACHARAVTAADTDWPGIVALYDALTELAPSP
                     IVELNRAVAVSMAYGPAAGLNALDGLLNAAPLRNYHLLPSVRGDLLVKLGRHDEAVAE
                     FERAAGMAQNAREKHLLQQRASVARRNSGLAH"
     gene            3336..>5014
                     /locus_tag="VLD58_17490"
     CDS             3336..>5014
                     /locus_tag="VLD58_17490"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSB56161.1"
                     /translation="MLSSDLRYALRSLTRVPGFTLTVILTLGLGIGANTAIFSVVRGV
                     LLKPLPNKDGDRLLYLRQSINGPGGENILFSVPEINDIRENAKSLNGIAEYSQMTYTL
                     QGESDAVRMTVGLVTGNFFDVMGLSPVAGRLLNSGDDGTKVPPVMVLTYDYWMRRFGG
                     DRSLIGKDVLLDGRKVAVVGVVQPAPSFPTKIDAYLNMVISEHHTSAMMVQGRTHRMT
                     EMIARLAPGATVNQARAEVATIRARVQKEFPDAYDPGSGYRVSLTPFKVVLGEKAQLT
                     LWLLMAAAAFVMVISCANVVNLTLMRGVRREQELVVRAALGAGATRLRKLLLVENLVL
                     ATMGAIFGLLLAKVGVRLLVALAERYSPRADEIRLDGMVLGFTLLLTLVVALILSFAP
                     RLAKEGTLGGLLASGANRASGGLRRQRLQRVLVVAQIAVSVMLLTGAGLLTRTMQQLS
                     EVKSGLTHEDVLTMEVPLTSTGRSNDDTRSLYERMQLEVAAIPGVKEVGVGSVMPLRL
                     AGFQLDVKAEGRPLNAGEAVPHAEYRTASPEYFSASGIPLLKGREFLSTDR"
BASE COUNT          796 a         1693 c         1775 g          750 t
ORIGIN      
        1 cgatggcgga gtgagagatg gccgatcatg ctgaggactg aagcgcctgt cgagaaggcg
       61 aagacctgca gcatcgccat gaccgcggct cgtgcgccgg gtaggggcag cagggcgagg
      121 ctgaccatgg tggcgagcga gagcccggcg agcgcgccgg agccccgggc cacgaatcgg
      181 agaatccgct ccgccctggt ctcccgaagc agcccttcga cggcccgttc ctcgcgcccc
      241 tgctcgatct cgctcttgaa ggccgggtcg agatcgccgt gggtgaagcc cagcagcatg
      301 aggcgccgcg ccgcggcgac gaggtagccg aacgggaccg ccgtgagccc gaacaggaag
      361 ctcccgaacc cccaccaccc gccggtgaag gaggacacga cagtcgacgc gaccaccagc
      421 cccaacccgt acagcatcgt gccgctgcca tcgatccgac cggtgcgctt cacgaacgcc
      481 cgcagcgcga ccggcagctc ccgccgctgt tccagcgcca ccccgagttg ctcggccagc
      541 aggtcggccg aggcggggcg atgctcgggc tccttggcga ggcagcgatc caccaggagc
      601 gccagcttcc gcggcacggc gaggccgagg cccgcgagtg acggcgccgg ctcggtgacg
      661 tgctttgcga ggatctcggt cgccgtgtcc ccggtgaacg gcaggcgcgc ggagagggca
      721 tagaacgccg tcgcgcccag cgcgtagatg tcgctgcgcg cgtcgatcgc cccgccgagc
      781 gcctgctccg ggctcatgaa ctccggggtg ccggcgagcg gcaccagggt ctcggttccg
      841 gtcctggtcg cctcaggtcg cgccggaccc tcggccgtcg tgactgcacc cgccgcggcg
      901 atcccgaagt cgacgaccac gactcggccc gttgcgcctt cgaggaggat gttgtccggc
      961 ttcacgtcgc gatgaatcac tccctgcgcg tgcgcgtggg ccagggccca cgccgtctca
     1021 cggaggatcc gggccccgtc ggcgccgccg agcgggccac gggcctggac ccgttgggcg
     1081 agcgtcatcc cgtcgatgta cgacatcacg tagtagacga acccatgggt ctcgtcgacg
     1141 gcgtgaatcg ggatgatgtt cgggtgggag agcttggcgg cgagccgggc ctcccggagg
     1201 aaacgctggc ggagcgccgg atcggccgcg cgttcgggcg ggagcagctt gatcgccacc
     1261 agccggtcga ggtgcacctc gcgcgcgagg tagacgatcc ccatcccgcc ccggcccagc
     1321 tcatggtcga tcgaataccg gccggcgagt gcctgctgga gggagagaaa gagcgggtcg
     1381 ggagtggggc ccggagaggg catgctctga atgtctctgg gggccgattc aacagcaagc
     1441 ggccgccacc tggcggcctt tcgtctacca cggcttgccc ggatggccta agatgccgga
     1501 aacacgacac ttgccccatg tcgatttggg ggactatcga tcgacgtatt gatgaggagc
     1561 tggaagggct ccacccgact tcaaggagat ggcatgcggt tcatgatgct ggtgataccc
     1621 aaggcaacct acgacccggc cacgcccggc gccgccgcgg ctcaccccga tctcgtcgcc
     1681 aaaatgacga agatgatgaa gtacaacgat tcgctgcaga aggcaggggt gctcctggcc
     1741 ctcgacggcc tccattcacc tgcgatgggt gcccgggtct cgtttcccgg tggcagcccc
     1801 caggtgacgg acgggccgtt cgccgaggcc aaggaggtgg tgggcggcta ctggatgatc
     1861 caggtcaagt cgcgggaaga ggccatcgaa tgggcccgcc gggcgccgat gagccccggc
     1921 gacatcatcg aagtacggca ggtgcatgag cagagcgagt tcccgcccga aatccaggag
     1981 gcggcaaggc agttccacga gttgcagaag cactcccgct aaagaaaccg gatcagccgg
     2041 gtaatgagcg acacacacgc cgcgatcgac gccgtctggc ggatcgagtc ggcccgggtc
     2101 attgccgggc tggcccggat cgtgggtgac gtggggattg ccgaagacct ggcccaggac
     2161 gcgctggtcg cggccctgga gcagtggccc cagtcgggcg tgccgcggaa ccccggggcc
     2221 tggctgatgg cgaccggcaa gcaccgcgcg ctcgacgtgg tgcggcggcg gaagatgctc
     2281 gaacggaagc acgcacagct gggccacgaa ctcgaagccc ggcaggagga gatggtgccg
     2341 gacctcgacc aggcgctgga cgatccgatc ggtgacgacc tgctccggct gatgttcacc
     2401 gcctgtcacc ccgtgctctc gaccgagtcc cgggtcgcgc tcaccctgcg gctcctgggc
     2461 gggctcacca ccggcgaaat cgcccgggcg tttctcaccg ccgagcccac ggtggcccag
     2521 cggatcgtgc gggccaagcg gaccctcacc gaggcccggg ttcccttcga gcttccgcct
     2581 cccgccgaac tcggcgcgcg gctggagtcg gtgctggggg tgatctacct gatcttcaac
     2641 gaaggctacg ccgcgagctc gggagaggac tgggtgcggc cggcgctgtg cgaggatgcg
     2701 ctccggctgg gccgcatcct ggccgaactg gcgccggggg aacccgaagt ccatggtctg
     2761 gtggcgctga tggagatcca ggcgtcacgc ttcgcggccc gcaccggtcc caccggcgag
     2821 atgatcctgc tcctcgacca ggaccggtcg cgctgggacc acctgctcat ccggcggggg
     2881 ctggccgcgc tcgagcgggc cgagtcgctg ggggtggggc tgggaccgta cgggctccag
     2941 gcggcgatcg cggcctgtca tgcgcgcgcc gtgaccgcgg ccgacaccga ctggcccggt
     3001 atcgtggcgc tctatgacgc cctgacggag ctggcgccct cacccatcgt cgagttgaac
     3061 cgggcggtgg cggtgtcgat ggcgtacggg cccgcggccg ggctcaacgc cctcgatggg
     3121 ctgctcaacg ccgctccact caggaactat catctccttc cgagcgtacg gggggacctg
     3181 ctggtcaagc tgggccggca tgacgaggcg gtcgccgagt tcgagcgcgc cgccgggatg
     3241 gcccagaacg cacgcgaaaa gcacctcttg cagcagcggg cgtccgttgc ccgccggaac
     3301 tcaggcctgg cccactgatc aaggcgatcc caccgatgct ctcctccgac ctccgctacg
     3361 ccctccgtag cctgacgcgt gtccccggct tcaccctcac tgtgatcctc acgctcggac
     3421 tcggtatcgg ggccaacacc gccatcttca gcgtggtgcg cggggtgctg ctcaagccgc
     3481 tgcccaacaa ggacggagac cggctgctct acctgcgcca gtcgatcaac gggccgggcg
     3541 gcgagaacat cctcttctcg gtccccgaga tcaacgatat ccgtgagaac gcgaagtcgc
     3601 tgaatggcat cgccgagtac agccagatga cctacacgct ccagggcgag agcgatgcgg
     3661 tccgcatgac cgtggggctc gtcaccggca acttcttcga tgtgatgggc ctctcgccgg
     3721 tggcggggcg gctgctcaac tcgggcgacg acggaaccaa ggtgccgccg gtaatggtgc
     3781 tgacctacga ctactggatg cggcgcttcg gcggcgaccg gagtctcatc ggcaaggacg
     3841 tgctcctcga tggccggaaa gtggcggtgg tcggggtggt gcagccggcc ccgtcgttcc
     3901 ctaccaagat cgatgcttac ctcaacatgg tgatcagcga gcaccatacc agcgcgatga
     3961 tggtgcaggg gcggacccac cgcatgaccg agatgatcgc ccggctcgcc cccggcgcca
     4021 cggtgaacca ggccagggcc gaggtggcaa ccatccgggc gcgggtgcag aaggagttcc
     4081 ccgatgccta cgaccccggc tcgggatacc gggtctcgct cacgccgttc aaggtggtgc
     4141 tgggcgaaaa ggcgcagctg accctctggc tcctgatggc ggccgccgcg ttcgtcatgg
     4201 tgatctcctg cgccaacgtg gtgaacctca ccctgatgcg cggggtgcgc cgggagcagg
     4261 aactggtggt tcgcgccgcg ctcggcgccg gcgccacccg gctccggaag ctgctgctgg
     4321 tggagaacct ggtgctcgcc acgatgggcg ccatcttcgg gctcctcctg gccaaggtgg
     4381 gggtgcggct gctggtggcg ctggccgagc gctactcgcc ccgggccgac gagatccggc
     4441 tcgacgggat ggtgctgggt ttcaccctgc ttctcacgct ggtggtggcg ctgatccttt
     4501 cgttcgcgcc ccggctcgcc aaggaaggca ccctgggcgg cctgctcgcc tcgggcgcca
     4561 accgggccag cggcgggctc cggcgccagc ggctccagcg ggtcctggtt gtggcacaga
     4621 tcgcggtgtc ggtcatgctg ctgaccgggg cggggctcct cacccgcacg atgcagcagc
     4681 tctccgaggt gaagagcggg ctgacccacg aggatgtgct cacgatggag gtgccgctca
     4741 cgagcacggg ccgcagcaac gacgacaccc gctcgctcta tgagcggatg cagctcgagg
     4801 tcgcggccat tccgggtgtg aaggaagtcg gagtcgggtc agtgatgccg ctccggctcg
     4861 ccgggttcca gctcgacgtg aaggccgagg ggcggcccct caacgcgggc gaggcggtac
     4921 cccacgccga gtatcgcacc gcgagtcccg agtacttcag cgcctcgggg attccgctcc
     4981 tcaagggccg tgagttcctg agcaccgacc ggga
//
LOCUS       DATIFF010001204         3915 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_614977, whole genome shotgun sequence.
ACCESSION   DATIFF010001204 DATIFF010000000
VERSION     DATIFF010001204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 3915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3915
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_614977"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1518
                     /locus_tag="VLD58_17495"
     CDS             <1..1518
                     /locus_tag="VLD58_17495"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSB56162.1"
                     /translation="LGEAARRQGEIAARTALGASPGRLVRQLFTESLVIAGSGAFLGM
                     MAGWALTRILVAMAPANIPGLSDVRFDLRVLGFTVACALVSGLASGVLPVVALLKWGR
                     HPVAGAATGLTPRGEILAQRMLVGLEVALSLIMLVGCSLLGRSLIRLTGVDPGFVPEG
                     LLTVELTAPRSLWLDSARVVSFTDQAVRELKALPGVASVSGSNSGLLNGNTSSSPIKV
                     VGHPESEVRRDVQQRVVLADYFTTMRLPLVKGRDFSEADDHTSAPVAIISEAEVRRDF
                     PGESPLGQRVVWQGQEWTVIGVAADVHYSGLDEEVQPTIYIPSRQWAGSWMSFLVRAT
                     GSADGALLMRAIKERLAGVDPTIAITGINQVPALVRKSYAEERYRTLLGTLFGACGTV
                     LAAFGMFGVIARTVARRMREAGIRSALGAPAGSLTRLMLRETAIGAAAGIVVGVPMAA
                     WLARGLTPYLFGVGAGDPVAYLGALGLFTLAAAMATLPAARRAARVDPARVLRAE"
     gene            complement(1538..3007)
                     /locus_tag="VLD58_17500"
     CDS             complement(1538..3007)
                     /locus_tag="VLD58_17500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56163.1"
                     /translation="MTRFLVVVGVSVGMMVNVSSLQGQGSAPHGAGDAADWLARARAA
                     VGIPRASGKVLHYRSVEGAEQNYQSDRTYPPFFSAFVTREAWLDPVTGVVRATSQTTF
                     PGFAGRSELVSTEAASFAARDSALVPAPEAHLNSRTLRELDPWAVLLDWSRDPAIRVE
                     GHRRVRDYDRLVLGREGRFGHERLLLDPKSGFPVVLERTERHYLWGQVSVVYLYSTWT
                     LADGASYPGAIFRQVDGATEVTRTIANFALVPADSAPALRVPDAPSMPLALPLFLQPT
                     NPDTVRVGANAVLLVNRGYTEAVVLERDTVFLFDATQGDERARQDSVWIGRLFPGRHP
                     IVLVVTDLAWPHVAGVRFWVAAGATVVSHQISRPFLEQVVARRWTLEPDRLERMKQRP
                     PLRFRAVSDSLSLAGGAISLYPIDGIASEGALMAFLRRDGFLWASDYVQTVKEPSRYG
                     LEVYQAASRVGVEPSRLAAEHLPVTTWETLRKVVGAGGG"
     gene            complement(3171..>3915)
                     /locus_tag="VLD58_17505"
     CDS             complement(3171..>3915)
                     /locus_tag="VLD58_17505"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSB56164.1"
                     /translation="RRACPASADIFVLPLDLEDLPALAAQAATVLERFGAVDIMVHNA
                     GVAVRDRAVNTSLEVHERVLRTNYLGPVAITGALLPSMLARGAGQFVVISSLSGKYGG
                     PQLSAYAAAKHALHGYFESLRAEEHDRGIVVTLIVPGFIRTDITAHAFTGTGGRYGKV
                     LQIYRHAMTPERCARRILRAVAGRRQEVLVGGIEVWTVYLKRWFPGALSVVVRSHPVR
                     LRNRLLGWIPILGRRWRTPTSAQEKKPDR"
BASE COUNT          613 a         1313 c         1403 g          586 t
ORIGIN      
        1 ctgggcgagg cggcccgtcg ccagggagaa atcgcggccc gcaccgcgct cggcgcctcg
       61 ccgggacggc tggtgcgcca gctcttcacc gagagcctgg tcatcgcggg ttcgggggcg
      121 ttcctgggga tgatggcggg atgggccctt acccggatcc tggtggcgat ggcgccggcc
      181 aacatcccgg gtctctcgga cgtccggttc gacctcaggg tactgggatt cacggtcgcc
      241 tgcgccctcg tctcgggcct ggcgtccggt gtccttccag tggtcgcgct gctcaagtgg
      301 ggacggcacc ccgtcgccgg cgcggcgacc ggtctcacac cgagagggga aatcctggcg
      361 caacggatgc tggtcggtct cgaggtggcg ctctcgctca tcatgctggt cggctgttcg
      421 ctcctcgggc gatcgctcat ccggctcacc ggagtcgatc ccggtttcgt gccggaaggc
      481 ctcctcacgg tggagctgac ggcgccgcgc agtctctggc tggatagtgc gcgcgtggtc
      541 agcttcacgg accaggccgt ccgggagctc aaggccctgc ctggtgtcgc atcggtgagc
      601 ggctcgaact cggggctcct caacgggaac accagcagct cgccgatcaa ggtggtgggc
      661 caccccgaat ccgaggtccg gcgcgacgta cagcagcggg tggtgctggc tgactacttc
      721 accaccatgc gcctcccgct ggtgaaaggc cgcgacttca gcgaggcgga tgatcacacc
      781 tcggcgccgg tggccatcat ctcggaggcg gaggtccggc gcgacttccc gggcgaatcg
      841 ccgctggggc agcgggtcgt ctggcaggga caggaatgga cggtcatcgg ggtggccgcg
      901 gatgtgcact acagcgggct cgacgaagag gttcagccaa ccatctacat cccaagccgg
      961 cagtgggccg gaagctggat gagtttcctg gtccgggcca ccggcagcgc ggacggcgcg
     1021 ctcctcatgc gcgctatcaa ggagcggctg gcaggagtcg accccacgat cgccatcacc
     1081 gggatcaacc aggtgccggc gctggtgcgg aagtcctatg ccgaagagcg gtaccgcacc
     1141 ctgctcggta cgctgttcgg ggcctgcggg acggtgctcg cggcctttgg catgttcggg
     1201 gtcatcgccc gcacggtggc gcggcggatg cgcgaggcag gtatccgctc ggcgctggga
     1261 gcgccggcgg gttcgctcac ccgtctgatg ctgcgggaga cggcgatcgg cgcggcggcg
     1321 gggatcgtgg ttggcgtccc gatggcggcg tggctggcgc gcgggctcac accctacctg
     1381 ttcggggtgg gggcggggga cccggtggcg tacctggggg cgctggggct cttcaccctg
     1441 gcggcggcaa tggcgacgct gcccgcggca aggcgggcag cgcgagtaga tccggcgagg
     1501 gtgttgaggg cggagtgagg atgggagtcc ggctgtctca tcctccaccg gctcccacca
     1561 ccttcctgag ggtttcccag gtggtgaccg ggagatgctc ggcggcgagg cgggacggct
     1621 cgacccccac cctgctcgcg gcctggtaca cctccagccc gtagcgactc ggctccttca
     1681 cggtctgcac gtagtcgctg gcccagagga agccgtcccg ccgcaggaac gccatcagcg
     1741 cgccttcgct ggcgatgccg tcgatcgggt agaggctgat cgcgccgcct gcgagagaga
     1801 gtgaatcgct caccgcgcgg aagcggagcg gtggccgctg cttcatccgc tcgagccggt
     1861 ccggctccag tgtccagcgc cgcgccacga cctgctccag gaacgggcgc gagatctggt
     1921 gggacacgac cgtggcgccg gcggccaccc agaaccgcac cccagccacg tggggccagg
     1981 cgagatcggt gaccaccagg acgatcggat gacggcctgg aaagagccgc ccgatccaga
     2041 ccgaatcctg gcgggcgcgc tcgtcaccct gggtcgcatc gaacaggaac accgtgtcac
     2101 gctccagcac cactgcctca gtgtagccgc ggttcaccaa cagaacggcg ttggcgccca
     2161 cccgcaccgt atccggatta gtgggctgga ggaacagcgg gagcgcgagc ggcatgctcg
     2221 gcgcatcggg aacccggagc gccggcgcac tgtcggcggg cactagtgcg aagttcgcga
     2281 tggtacgggt gacctcggtc gcgccgtcca cctggcggaa gatcgcgccc gggtaggacg
     2341 cgccgtcggc cagggtccag gtgctgtaca ggtataccac cgaaacctgg ccccagagat
     2401 agtgccgctc ggtccgttcc aggacgaccg gaaaccccga cttcggatcc agcagcaggc
     2461 gttcatgccc gaagcgccct tcccgcccga gcaccaggcg atcgtagtcc cgcacccgcc
     2521 ggtggccttc gacccggatc gccggatctc gcgaccagtc gagcaggacc gcccacggat
     2581 cgagttcgcg gagcgtccgg ctattgagat gtgcctcggg cgccggcacc agggcggaat
     2641 cgcgagcggc gaagctcgcg gcctcggtag acacgagttc cgaccgaccg gcgaatcccg
     2701 gaaaggtcgt ctgtgacgtg gcccggacca caccggtcac gggatccagc cacgcctccc
     2761 gcgtcacgaa ggcggagaag aacggaggat aggtacggtc cgactggtag ttctgctctg
     2821 ccccctccac gctccgatag tgcaggacct tgccgctggc ccggggaatg cccaccgccg
     2881 cccgggcgcg tgccagccag tcggcggcat ccccggcacc gtgcggggcg gatccctggc
     2941 cctggaggga cgaaacgttg accatcatgc cgacggacac accgaccaca acgagaaacc
     3001 gggtcacgga cacacctcct tggggctcag gccgagaacc atcgcgtgcc gggacaacag
     3061 taccggcgag gggccgtgag gcggacgacg attggggtgg gctgcggata ggtggggtgg
     3121 gcggcttggt gggcggctgg ggcggacgcg gtgtgacaat ggccgctccc ttaccggtca
     3181 ggcttcttct cctgtgccga cgtcggcgtc cgccatctcc ggcccagaat ggggatccac
     3241 cccaggagtc gattgcggag ccgcaccgga tggctccgga ccacgacgga gagcgcccct
     3301 ggaaaccagc gcttgaggta gacggtccac acctcgatcc ctccaaccag cacctcctgc
     3361 cgccggccgg cgacggcacg gaggatccgc cgggcgcacc gctccggcgt catcgcgtgg
     3421 cgatatatct ggagcacctt cccatagcgg ccaccggtcc cggtgaacgc gtgggcggtg
     3481 atatcggtgc ggatgaatcc gggaacgatc agagtgacca caatgccccg gtcgtgctct
     3541 tcggcccgca acgactcgaa gtagccgtgg agtgcatgct tggccgcggc gtaggcggag
     3601 agttgcgggc cgccgtactt gccggagagg ctgctgatca ccacgaactg accggccccg
     3661 cgggccagca tggacggcag gagcgccccg gtaatcgcga ccggtccgag atagttggtc
     3721 cgcagcaccc gctcgtgcac ctcgaggctg gtgttcactg cccggtcgcg aaccgccacg
     3781 ccggcattgt gcaccatgat gtcgacggcc ccgaatcgtt cgagcactgt cgccgcctgg
     3841 gctgcgagcg cgggcagatc ctccaggtcc aacgggagca cgaagatgtc ggcggacgcg
     3901 ggacaggccc gcctc
//
LOCUS       DATIFF010001205         6276 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_922247, whole genome shotgun sequence.
ACCESSION   DATIFF010001205 DATIFF010000000
VERSION     DATIFF010001205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6276
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_922247"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..226)
                     /locus_tag="VLD58_17510"
     CDS             complement(<1..226)
                     /locus_tag="VLD58_17510"
                     /inference="COORDINATES: protein motif:HMM:NF019614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1697 domain-containing protein"
                     /protein_id="HSB56165.1"
                     /translation="MAERCVALLRGINVGRAKRIAMADLRTVFERLGYGEVRTLLNSG
                     NVVFTAPRVSASLAPKLREAIREKLKVDSRV"
     gene            complement(231..785)
                     /locus_tag="VLD58_17515"
     CDS             complement(231..785)
                     /locus_tag="VLD58_17515"
                     /inference="COORDINATES: protein motif:HMM:NF014373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HSB56166.1"
                     /translation="MPYVPDALSIDSPEFWTRLMTAILCGGVIGLERQIRGKASGIRT
                     SIMICLGTSIFVSLGATAERADPTRVLGQVVTGIGFLGAGVILTREGRILGVTTAALI
                     WVTAAIGCVIGFGYVKTALVLTALTIAVLLGVEFFEGIVERRLVRSQLRERESAGQER
                     RKVNWGRRSGDVGFIPDDRADQDR"
     gene            884..1633
                     /locus_tag="VLD58_17520"
     CDS             884..1633
                     /locus_tag="VLD58_17520"
                     /inference="COORDINATES: protein motif:HMM:NF014346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSB56167.1"
                     /translation="MLRSAVVRLLVLVLVPGALTAQAPGKWPPDSLINVKVFPKNTPV
                     NQVVGQMRNITQGLGVRCHYCHEGEEGTPLEKTDFASDKKRPKLVARQMLRMVQEINA
                     RLDTIPERPSSKVDVTCRTCHRGVSRPMPLANVVIDASLAAGADSGLRAYQGLREKYY
                     GRDSYDFGESSLNVAAFRLARENKFDDALKVLDYNEKLFPNSSGMSVFRGNVLLLKGD
                     TASAANAFREAIRRDSTNGEARGRLKDLGQK"
     gene            complement(1700..2038)
                     /locus_tag="VLD58_17525"
     CDS             complement(1700..2038)
                     /locus_tag="VLD58_17525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56168.1"
                     /translation="MAGLPGWEVEEKFPWSLEYREAGRTLSLSAEMSSGPGVSIIIYD
                     EPDQLRWQPPHRGEPLSRAESHPILVRITAALLLLGIRPIWETLPASAERTDWPVIQA
                     EAQALLRRAG"
     gene            complement(2070..2507)
                     /locus_tag="VLD58_17530"
     CDS             complement(2070..2507)
                     /locus_tag="VLD58_17530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56169.1"
                     /translation="MAQPRETAETATPAQLRMRSIQLGLMFVALAFLIVPFLRDLPLG
                     QTTRTGLLAWLLVALSLYWLYSGLGYRPLLLLQLALFSAAATLLVTKAGLVLFGVNAL
                     SILRRTAKGMILIGAGISLLNLGAMVYALFHHSQHFPVRPPPE"
     gene            complement(2522..5761)
                     /gene="carB"
                     /locus_tag="VLD58_17535"
     CDS             complement(2522..5761)
                     /gene="carB"
                     /locus_tag="VLD58_17535"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: protein motif:HMM:NF009455.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) large subunit"
                     /protein_id="HSB56170.1"
                     /translation="MTPRKVEPRRRVLLLGSGALQIGQAGEFDYSGSQAIKALREDGV
                     YTVLVNPNIATIQTSEGLADKVYFVAITPENVERILEKEKCDSILLGFGGQTALNCGL
                     ALEKRGTYERLGVKVLGTPVKTIRDTEDRELFKQRLAEIGVKVATSRACDTIDQARAA
                     VKELGLPIMLRGAFALGGKGSAVLTEEKEVEPALKRSFAGNIPQVLVEEYLGGWKEIE
                     VEVVRDSADNCITVCNMENFDPMGIHTGESIVVAPVQTLNDEEVQLLRTLAIDTIRHL
                     GIVGECNIQYALDPKSTDYRVIEVNARLSRSSALASKATGYPLAYVAAKIALGYTLPE
                     IPNGITKKTTAFFEPALDYIVCKFPRWDLGKFRGVSTRIGSEMKSVGEVMAIGRSFPE
                     VIQRAVRMLDIGALGVDPDFFTGDDVREALRVPTSLRVFAIAKALEQGMSTEEVSQLT
                     GMDQWFLHGIADIVALRGELKAAAKAGGAAVLPAGLIERAKKLGFSDHGIGRLTGLTA
                     EQVRTQRKALGIIPRLARIDTLAAEFPAETNYMYPSYNAIENESPPSDRKKIMVLGSG
                     AYRIGSSVEFDWCCVSAVRAAAELGYETVMLNYNPETVSTDWDECDRLVFDEVSFESV
                     LDLWESEKPEAIIVSMGGQVPNNLALRLARAGVKILGTSAESIDNAEDRRKFSALLDQ
                     LKIDQPAWIHLKERNAAGDEIEKLGGYPVLVRPSYVLSGAAMSVAHDPAELDRILERA
                     RTISAEHPVVVTKFETGAREIEVDAIADQGKMVLWAVCEHVEDAGVHSGDATLMLPPQ
                     TVPMPVIHKARKIAAQLAEALAITGPFNVQLLARSGRVRVIECNLRASRSLPFVSKVT
                     GTNFVREATRRMLGVRDPVSNRALDLDYVAVKVPQFSFPRLVGADPILGVEMASTGEV
                     GCFGDDGDEALLQGLNATGFRNPKKGVLLSLGPRSEKYSFLEEARALHEELGLALYAT
                     PGTAEALKAEGIPCTPLAKEPGKERSAMDVIDEGLVDLVINVPRSYDELGRPDGYLIR
                     RRAIDAEVPLMTDLMLATALVNALRNRHETVPAIRSWDEYLERRPRHLV"
     gene            complement(5758..>6276)
                     /locus_tag="VLD58_17540"
     CDS             complement(5758..>6276)
                     /locus_tag="VLD58_17540"
                     /inference="COORDINATES: protein motif:HMM:NF012345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl phosphate synthase small subunit"
                     /protein_id="HSB56171.1"
                     /translation="KHGARVTRAPWHSDIGALAANMDGVLIGNGPGDPQDLQELVEKV
                     RGLFKRPNFPIFGVCLGNQILALAAGGSTFKLPYGHRGVNQPVQEIGTRRCFVTSQNH
                     GYAVNEKTLPRDWEPWFTNLNDGTNEGIRARFKPIFSIQFHPEACPGPRDTAFLFEEF
                     LRLCGAAKGGSR"
BASE COUNT          969 a         2047 c         2213 g         1047 t
ORIGIN      
        1 tgacccggct atccaccttg agcttctcgc ggatggcctc gcggagcttc ggggcgaggg
       61 aggcactcac tcgcggcgcg gtgaacacca cgttaccgct gttgaggagg gtccgcacct
      121 caccataccc cagccgctcg aacacggtac ggaggtcggc catggcgatc ctcttggccc
      181 tgccgacatt gatgccccgg agcagggcca cgcaccgctc ggccacgggc tcagcggtcc
      241 tggtcggcgc gatcgtcggg gatgaacccg acgtcgccgc tgcgccggcc ccagttcacc
      301 ttgcggcgtt cctggccggc gctttcccgt tcccgcagct ggctccggac gaggcgtcgc
      361 tccacaatcc cctcgaagaa ctcgaccccg aggaggacgg caatcgtcag cgcggtgagg
      421 accagggcgg tcttgacgta accgaagccg atgacgcagc ctatggcggc ggtgacccag
      481 atcagggcgg cggtggtcac gccgaggatt cggccttcgc gggtcaggat gacgccggcc
      541 cccaggaacc cgatgccggt gacgacctgg cccagcaccc gggtggggtc cgcccgctcg
      601 gcggttgcgc ccagggacac gaagatgctg gtgccgaggc agatcatgat gctggtccgg
      661 atcccgctcg ccttgccgcg gatctggcgc tccagcccga tcacgccgcc gcagaggatc
      721 gcggtcatga gccgggtcca gaactcgggg ctgtcgatcg agagggcgtc ggggacgtag
      781 ggcatggggc aaagctgtgg accggtgagc ccggcggcaa ggaccacgag gtgccccggc
      841 ctccgggctg cgggcgtgtc atcaccttta ccacggaacc gccatgcttc gatcggccgt
      901 tgtgcgactg ctggtgctgg tcctcgtacc cggagccctc accgcccagg cccccggcaa
      961 gtggccgccg gattcactga tcaatgtgaa ggtgtttccc aagaacacgc cggtcaacca
     1021 ggtggtggga cagatgcgca acatcaccca ggggctgggc gtgcgctgtc actactgcca
     1081 cgaaggcgaa gagggcaccc cgctcgagaa gaccgatttc gcgagcgaca agaagcgtcc
     1141 caagctggtg gcgcggcaga tgctccgcat ggtgcaggag atcaacgccc ggctcgatac
     1201 gatccctgag cggcccagct cgaaggtcga tgtcacctgc cgcacctgtc accggggcgt
     1261 gagccggccc atgccgctcg cgaacgtggt gatcgatgcc tcgctggccg cgggcgccga
     1321 ttcgggtctc cgggcctacc agggcctgcg cgagaagtac tacggtcgcg attcctacga
     1381 cttcggcgag agctcgctca acgtcgcggc cttccggctg gcgcgggaga acaagttcga
     1441 cgacgcgctc aaggtgctgg actacaacga gaagctgttc cccaattcgt cgggaatgtc
     1501 ggtgttccgg gggaacgtac tgctgctcaa gggcgacact gccagcgcgg cgaacgcctt
     1561 ccgcgaggcg atcaggcggg actcgaccaa cggcgaggcg cggggaagac tgaaggatct
     1621 ggggcagaag taggctgggg gtcgggagtc ccgagtcacg agtcgctggt cacgacttac
     1681 gagtcagggg tccaggtctt catcctgctc tccggagcag ggcctgggct tcggcctgga
     1741 tcaccggcca gtcggtgcgt tccgcgctgg ctggcagcgt ttcccagatt ggcctgatgc
     1801 ccagcaggag cagcgcggcg gtaatccgca ccaggatggg gtgagactcg gcgcgggaga
     1861 gaggctcgcc ccggtgaggt ggctgccacc ggagttggtc cggctcgtca tagatgatga
     1921 tcgacacgcc cggcccgctc gacatttccg ccgaaaggct cagcgtccgt cccgcctcgc
     1981 ggtattcgag actccaggga aacttctctt ccacttccca cccgggaagg ccggccaccg
     2041 tccggttgcc ggtgcgctgg atgacgggat tactcaggcg gcggccgaac ggggaaatgc
     2101 tgcgagtgat gaaagagcgc gtagaccatg gcgccgagat tgagcaggct gatgccggcg
     2161 ccgatcagga tcatcccctt ggcggtgcgg cgcaggatgc tgagggcatt gaccccgaag
     2221 aggaccaggc cggccttggt caccagcagc gtggccgcgg cggagaagag cgccagctgg
     2281 agcaggagca ggggccggta gcccaggccg gagtagagcc agtagagcga aagcgccacc
     2341 agcagccagg cgaggagccc ggtgcgggtc gtctggccca gcggcaggtc acgcaggaac
     2401 ggaacgatca ggaaggccag cgccacgaac atcaggccca gctggatgct gcgcatccgg
     2461 agctgggccg gggtggcggt ttcggcggtt tcgcgcggct gggccacgac cggttaccgg
     2521 gtcagacgag gtggcgtgga cgccgctcca ggtactcgtc ccaggagcgg atcgcgggca
     2581 cggtctcgtg ccggttccgg agcgcattca ccagcgccgt ggccagcatg aggtcggtca
     2641 tgaggggtac ttcggcgtcg atcgcgcggc ggcggatgag gtagccgtcg ggccggccca
     2701 gctcatcgta gctccgcggg acgttgatga ccaggtcgac cagcccctcg tcgatcacgt
     2761 ccatggcgct ccgttccttc cccggctcct tggcgagcgg ggtgcaggga atcccctcgg
     2821 ccttgagcgc ctcggccgtg cccggcgtgg catagagcgc caggccaagt tcttcgtgca
     2881 gcgcgcgggc ctcctcgagg aaggagtatt tctcgctgcg gggaccgagc gagagcaaca
     2941 cccccttctt cgggttccgg aacccggtgg cattgaggcc ctggagcagc gcctcgtcgc
     3001 catcatcgcc gaagcagccg acttcgccgg tgctcgccat ctcgacgccg aggatcggat
     3061 cggccccgac caggcggggg aaggagaact gggggacctt caccgccacg tagtcgaggt
     3121 cgagcgcccg gttggagacc gggtcgcgca cgcccagcat ccggcgggtc gcttcgcgca
     3181 cgaagttggt cccggtgacc ttcgagacga aaggaagact gcgcgacgcg cgcaggttgc
     3241 actcgatcac ccgtacccgt ccgctccgcg cgagcagctg cacgttgaac ggtccggtga
     3301 tggccagggc ctccgccagc tgggccgcga tcttccgcgc cttgtggatc accggcatcg
     3361 gcacggtctg gggcgggagc atcagggtcg cgtcgccgct gtgcaccccg gcgtcttcca
     3421 cgtgctcgca gacagcccag agcaccatct tgccctggtc ggcgatggcg tccacctcga
     3481 tctcgcgggc gccggtctcg aacttggtga ccaccaccgg gtgctcggcg ctgatggtgc
     3541 gggcccgttc cagaatccgg tcgagctcgg ccggatcgtg ggccacgctc atcgccgcgc
     3601 cggacagcac gtagctcggc cggaccagca cggggtaccc gcccagcttc tcgatctcgt
     3661 cgccggcggc gttgcgttcc ttgaggtgga tccaggccgg ttggtcgatc ttgagctgat
     3721 cgagcagggc gctgaacttc cgccggtcct cggcgttgtc gatgctctcg gcgctggtgc
     3781 cgaggatctt caccccggcc ctggccagcc gaagggccag gttgttgggc acctggccgc
     3841 ccatgctcac gatgatcgcc tcgggcttct cgctctccca gagatcgagc acgctttcga
     3901 agctcacctc gtcgaacacc agccggtcac actcgtccca gtcggtgctg accgtctcgg
     3961 ggttgtagtt gagcatcacg gtctcgtagc ccagctcggc ggcggcgcgg accgcgctca
     4021 cgcagcacca gtcgaactcc acgctcgagc cgatccggta ggcgccggac ccgaggacca
     4081 tgatcttctt ccggtcgctc ggcgggctct cgttctcgat ggcgttgtag ctcgggtaca
     4141 tgtagttggt ctcggccggg aattcggccg cgagcgtatc gatccgggcg agccgcggga
     4201 tgatcccgag cgccttgcgc tgggtgcgca cctgctcggc tgtcaggccg gtgaggcgcc
     4261 cgatgccgtg atcggagaag cccagcttct tggcgcgctc gatcaggccg gccgggagga
     4321 ccgcggcgcc gccggccttg gcggcggcct tgagctcgcc gcgcagcgcc acgatatcgg
     4381 cgatgccgtg gaggaaccac tggtccatgc cggtgagctg gctgacctcc tcggtcgaca
     4441 tcccctgttc cagcgccttg gcgatggcga agacacggag cgaggtcggg acccggagcg
     4501 cttccctgac gtcgtcgccg gtgaagaagt cggggtcgac gcccagggcg ccgatgtcca
     4561 gcatgcggac ggcccgctga atcacctcgg ggaaggagcg gccgatggcc atcacctcgc
     4621 ccacgctctt catctcgctc ccgatccggg tggagacgcc gcggaacttg ccgaggtccc
     4681 agcgggggaa cttgcagacg atgtagtcga gggccggctc gaagaaggcg gtggtcttct
     4741 tggtgatgcc gttggggatc tcgggcaggg tgtagcccag cgcgatcttg gcggccacat
     4801 aggccagcgg atagccggtg gccttggagg cgagcgcgct ggaccgggag agccgggcgt
     4861 tcacctcgat gacacggtag tcggtgctct tcgggtcgag ggcgtactgg atgttgcact
     4921 ccccgacgat gccgaggtgc cggatggtgt cgatggcgag ggtgcggagg agctgcacct
     4981 cttcatcgtt cagggtctgc accggggcca ccacgatgga ctcgcccgtg tggatgccca
     5041 tcgggtcgaa gttttccatg ttgcagacgg tgatgcagtt gtccgcgctg tcgcggacca
     5101 cctcgacctc gatttccttc cagccgccga gatactcctc gaccagcacc tggggaatgt
     5161 tgccggcgaa ggagcgcttg agggccggct ccacttcctt ctcctcggtc aggaccgcgc
     5221 tgcccttgcc gcccagcgcg aaggcgccgc ggagcatgat cgggaggccc agctccttga
     5281 ccgcggcgcg ggcctggtcg atggtgtcgc aggcccggct ggtggcgacc ttcacgccga
     5341 tctcggccag ccgctgcttg aagagctcgc ggtcctcggt gtcgcggatg gtcttgaccg
     5401 gggtgccgag caccttcacg cccagccgct cgtaggtgcc gcgcttctcg agcgcgaggc
     5461 cgcagttgag cgccgtctgt cccccgaagc cgaggaggat gctgtcgcac ttctccttct
     5521 cgagaatccg ctcgacgttc tcgggagtga tggcgacgaa gtagaccttg tcggccagcc
     5581 cttcgctggt ctggatggtg gcgatgttgg ggttcaccag gacggtgtag accccatctt
     5641 cgcgaagtgc cttgatcgcc tggctgccgg agtagtcgaa ctcgccggcc tggccgatct
     5701 ggagcgcgcc cgacccgagg agcaggaccc ggcggcgggg ctcgaccttg cggggggtca
     5761 tcgcgagcct cccttcgccg cgccgcagag tcgcaggaat tcctcgaaga ggaacgcggt
     5821 gtcgcgcggg ccggggcagg cctcggggtg gaactggatg ctgaagatcg gcttgaagcg
     5881 ggcccggatc ccctcgttgg ttccgtcgtt caggttggtg aaccagggct cccagtcgcg
     5941 cggcagcgtc ttctcgttca ccgcgtagcc gtggttctgg ctggtgacga agcagcggcg
     6001 ggtgccgatc tcctgcaccg gctggttcac tccccgatgg ccgtacggga gcttgaaggt
     6061 gctgccaccg gcggcgaggg ccaggatctg gtttccgagg caaacgccga agatcgggaa
     6121 gttgggccgc ttgaagagcc cacgcacctt ctcgaccagc tcctgcagat cctgcgggtc
     6181 accggggccg ttgccgatca ggaccccgtc catgttcgcg gcgagggcac cgatgtccga
     6241 gtgccagggc gcccgagtca cgcgcgcgcc atgctt
//
LOCUS       DATIFF010001206         6698 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Gemmatimonadales bacterium isolate SMAG_U16388
            k141_922686, whole genome shotgun sequence.
ACCESSION   DATIFF010001206 DATIFF010000000
VERSION     DATIFF010001206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37935882
            Sequence Read Archive: SRR25158320
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadales bacterium (soil metagenome)
  ORGANISM  Gemmatimonadales bacterium
            Bacteria; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales.
REFERENCE   1  (bases 1 to 6698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 05:48:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,514
            CDSs (total)                      :: 3,493
            Genes (coding)                    :: 3,480
            CDSs (with protein)               :: 3,480
            Genes (RNA)                       :: 21
            tRNAs                             :: 19
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 5 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            Pseudo Genes (multiple problems)  :: 3 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6698
                     /organism="Gemmatimonadales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_922686"
                     /isolate="SMAG_U16388"
                     /isolation_source="soil"
                     /db_xref="taxon:2448054"
                     /environmental_sample
                     /country="China"
                     /lat_lon="30.18 N 121.35 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..550)
                     /locus_tag="VLD58_17545"
     CDS             complement(<1..550)
                     /locus_tag="VLD58_17545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSB56172.1"
                     /translation="MGTATRPAEGATLPKLAAGFKPSVPIRAVYDNWIAGEYVPPARG
                     KYFTNPTPITGQPLCEVARSTHEDVDKALDAAHAAAISWNATSPAYRANILNRIADRI
                     EANLDTLAFIETIDNGKPIRETTHADLPLAVDHFRYFAGCLRAQEGSLSELDEDTVAY
                     HFHEPLGVVGQIIPWNFPLLMAT"
     gene            831..3395
                     /locus_tag="VLD58_17550"
     CDS             831..3395
                     /locus_tag="VLD58_17550"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HSB56173.1"
                     /translation="MPVQPTSDPFSATHPAAFGPYRITGVLGQGGMGTVYAAEQVQPI
                     RRRVALKVIRGGLDSANVVARFEAERQALAVMEHPSIARVFDAGTSDGGSLYFVMEYV
                     EGTTLGRYCDARDLSVRQRLELFIPICLAVQHAHQKGVIHRDLKPSNVLVTEQAGVPL
                     PKVIDFGIAKAVNRRLAEDSLVTQVGTVLGTPAYMSPEQAQGSGVDVDTRTDVYSLGV
                     MLYEILAGTLPVDPAEIGLVQFVARLLARNSAPEPPSRRVTRQLPERTVVTRSKSEQT
                     ALVRELRGDLDAIVLKAMAPERERRYQTAQELAQDIERHLRHEPIAARAPSVSYRFGK
                     FVQRHPTGVALAATVVLFLAGLAAEMTVQARRIAQARTVAEQRRTQAEDLISYMVGDL
                     RAKLEPIGKLAILDDVGRRALAYFAAVPATELNQDELFRRSQALSQLGQVRVAQGDLE
                     QAMPAFRESLTLAADLAARNPSKAEWQVGLGAGHFWVGYTYFLRGALDSALAEFEPYL
                     GIAQRLVERDSARPEWQLELGYAHSNIGSVREAQGDLPGALEAYRYTLAVKQRLVALD
                     TANVDWQVDLGVTHNTVGRAYERLGQLDSAEHHYWADLEIRERVAARDTSNALWRERL
                     VPALTYAGGIDQLRGRLGAARARRDSAYRVARTLGLRDPDNADWARNLGVTALLLGRT
                     EVELGARAAGIGLLQESRRTLRRLVERDSTNADLRLQLGIAESELAGALAAGGEAARA
                     RAGVTAAESLLAPMAGKAGAERRARLALARARLVAAELDDRQHLRDSARTARLAALDA
                     LGDPAGDELEGVDVRARALVGLGRPAEAEPLVARLRGYGYRAPGFPELAAKLNQGS"
     gene            3441..3770
                     /locus_tag="VLD58_17555"
     CDS             3441..3770
                     /locus_tag="VLD58_17555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56174.1"
                     /translation="MRNVTVKYRSDRDEVDFAPDNGKLVMTARDSITFKKGGSVDFDF
                     ASFSLYPEDLSQFPRTVLPDHIDVEDRFTDKQETSYKYTVVIKLRDGSSRVGDPQIIN
                     KPSGVTT"
     gene            complement(3796..5718)
                     /locus_tag="VLD58_17560"
     CDS             complement(3796..5718)
                     /locus_tag="VLD58_17560"
                     /inference="COORDINATES: protein motif:HMM:NF019352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HSB56175.1"
                     /translation="MTRWIAYAALVSLGTLTAALGPPADDRIVPNDNRRSSGTLRHGV
                     LTVALEARTGVWRPEGDSGRALDVAAFGETGKALSTPGPVIRVPLGTEIHATVRNGLD
                     RALTVFGFGRIRGQPDSVIIPPEATAPLRFKATVPGTYYYYAKRGVDPIGIRLVEDMQ
                     LHGVIVVDPPNAPRRPADRIFALSWWCAVAPPSPSGLSRCTMAINGLSWPHTERLAYT
                     QGDSVHWRVVNFTELDHPMHLHGFYFRMESKGNGLTDSLYAPEQRRMGVTEILPPFGT
                     MSLSWAADRPGNWIYHCHYATHLSKLVALDTENGVLDDGMLHHHMSDRPHQMFGLVLG
                     ITIAPKGANPASAETPRALRIVQRERPNIYGSQAGMSYVLDGTPDAADSTALPIPGPM
                     LLLERGKRVAVTIVNQSQEPAAVHWHGIELESYPDGVPGWSGSGQTILPSISPGDSLT
                     VRWTPPRAGSFMYHSHFNEAMQMGSGLYGPIIVLEPGQRFDPETDKILFFGTAGTAQN
                     PVFGPFPHFVLNGKAQPEAMNLRAGTRYRFRLFNLAGDMPLMVSLNAGDAPINWRAVA
                     KDGYPLPPSQAVSRAAVLMFDPGEIYDFEYTPAAPGELTLRFGPMPPPPAPPPPPGSP
                     PPPTPPPTITVPVHVR"
     gene            6055..6489
                     /locus_tag="VLD58_17565"
     CDS             6055..6489
                     /locus_tag="VLD58_17565"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HSB56176.1"
                     /translation="MTPPAPCSGKGTALYVDATERVLWLCDSGKAVEAIPVALGRGGL
                     DKRVEGDAKVPLGEYALGSPVPSKAFHLFIPVGYPTPSQRTKGFTGGAIGVHGPPRAY
                     GGPASTTMDWTLGCIAVGTDAEIGRVAGWLRATKARRIIIAE"
     gene            complement(6517..>6698)
                     /locus_tag="VLD58_17570"
     CDS             complement(6517..>6698)
                     /locus_tag="VLD58_17570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSB56177.1"
                     /translation="TRRVLMKKVMPVLVFYTTAVVHADGSVWFYPDVYGHDRELADAL
                     RAGPDSHGNLESAAQ"
BASE COUNT         1040 a         2243 c         2366 g         1049 t
ORIGIN      
        1 aggtggccat gagcagcggg aagttccacg ggatgatctg ccctaccaca cccaacggct
       61 cgtggaagtg gtaggcgacg gtgtcctcgt ccagttccga aaggctcccc tcctgggcgc
      121 ggagacatcc cgcgaagtag cggaagtggt ccaccgcgag cggcaggtcg gcgtgggtgg
      181 tctcgcgaat cggcttgccg ttgtcgatcg tctcgatgaa ggccagcgtg tcgagattgg
      241 cctcgatgcg gtccgcgatc cggttgagga tgttggcgcg gtaggctggg gaggtggcgt
      301 tccagctgat cgcggcggca tgcgcggcat cgagagcctt gtctacgtcc tcgtgcgtcg
      361 accgggcgac ctcacacagc ggctgccccg tgatcggggt cggattggtg aagtatttgc
      421 cccgggccgg ggggacatat tcgcccgcga tccagttgtc atagacggcc cggattggta
      481 cggatggctt gaagccagcg gccagcttgg gaagcgtggc gccttcggcc ggcctggttg
      541 cagtgcccat agatgtcgac tcctgcgttg gtgagagcgg atctccgcgg tgctgggcgt
      601 cccggtgcgt gctcttctcg gtctcctctg tccgcatgcg cggcacattg agggatagtg
      661 tcgcgccatc tccatgaaga catcatgaag ccgcgaagaa tcattcttcc cgctcactgc
      721 ggccgcggca ccacactact gccttgacgt cctcccttcc gcgcggtagc tcacatgcga
      781 agaccgcggg tgccaagcta cgggccttgc ccgggcccgc aggagacagc ttgcccgtcc
      841 aaccgacctc cgatccgttc agcgccaccc atcccgccgc cttcggtccc taccgcatca
      901 cgggggtcct cgggcaaggt ggcatgggaa cggtgtacgc cgcagagcaa gtccagccga
      961 ttcgccggcg cgtcgccctc aaggtgattc gcggcggcct cgattccgcc aacgtggttg
     1021 cccgcttcga agccgaacgc caggcgctgg ccgtgatgga gcaccccagc atcgcgcggg
     1081 tgttcgacgc cgggaccagc gacggcggaa gcctctattt cgtgatggag tacgtcgagg
     1141 gcacgaccct cggccggtac tgcgacgccc gcgatctatc ggtgcggcaa cggctcgagc
     1201 tgttcatccc catctgcctt gccgttcagc acgcccacca gaagggggtc atccaccggg
     1261 acctcaagcc gtccaacgtt ctggtgaccg agcaggccgg cgtcccgctc cccaaggtca
     1321 tcgacttcgg catcgcgaag gccgtgaacc ggcgtctggc cgaggacagt ctcgttaccc
     1381 aggtcggcac ggtcctcggc acaccggcat acatgagccc ggagcaggcg cagggatccg
     1441 gggtggatgt cgatacccgc accgacgtct actcgctggg cgtcatgctc tacgagatcc
     1501 tggccggcac gctgcccgtg gatccggcag agatcgggct ggtgcagttc gtcgcgcggc
     1561 tgctggcccg caactcggcg cccgaaccgc cgagccgccg ggtaacccgc cagctaccag
     1621 agcggacggt cgtgacccgg agcaagagcg agcaaacggc gctggtacgc gagcttcggg
     1681 gcgacctgga cgcgatcgtg ctcaaggcga tggcgcccga gcgggaacgc cgctaccaga
     1741 cggcccagga gctggcccag gacatcgagc ggcacctccg gcacgagccc atcgccgccc
     1801 gggctccgag cgtcagttac cggttcggca agttcgtcca gcgtcacccc accggcgtgg
     1861 cgctcgccgc gaccgtcgtc ctgttccttg cggggctcgc cgccgagatg acggtgcagg
     1921 cccgccggat cgcgcaggcc cggaccgtgg ccgaacagcg gcgtacccag gccgaggatc
     1981 tgatcagcta catggtgggc gacctgcggg ccaagctcga gccgatcggc aagctcgcca
     2041 tccttgacga tgtcgggcgg cgcgcgctgg cgtacttcgc cgccgtgccg gcgactgagc
     2101 tgaaccagga cgagttgttc cgccgctccc aggcgctgag ccagctggga caggtgcgcg
     2161 tggcccaggg cgacctcgag caggcgatgc ccgccttccg cgagtcgctg acgctggccg
     2221 cggaccttgc agcccggaac ccctccaagg cggagtggca ggttggcctg ggcgcgggcc
     2281 atttctgggt gggctacacc tacttcctcc gcggcgcgct cgactcggct ctcgccgagt
     2341 tcgagccgta cctcgggatc gcccagcgcc tagtcgagcg cgattccgcc cggccggagt
     2401 ggcagctgga gctgggctac gcccacagca acatcgggtc ggtgcgcgag gcgcagggcg
     2461 acctcccggg cgccctggag gcgtatcggt acaccctggc cgtcaaacag cggctggttg
     2521 cgctcgacac cgcgaacgtc gattggcagg tcgatcttgg cgttacccac aacacggtgg
     2581 gccgcgccta cgagcgcctg gggcagctcg attccgccga gcaccactac tgggccgacc
     2641 tcgagatcag ggaacgggtg gcagcccgcg acaccagtaa tgcgctctgg cgagagcggt
     2701 tggtgcccgc gctcacatac gcgggtggca tcgaccagct gcgcggccgg cttggcgccg
     2761 cgcgggcccg ccgcgattcg gcataccggg tggcccggac actcggcctg cgggatcccg
     2821 acaacgcgga ctgggcccga aacctggggg tcaccgcgct gctgctcgga cgcaccgaag
     2881 tggagctggg cgcgcgggca gccggcatcg gcctccttca ggagtcccgc cgaactctcc
     2941 gtcgcctggt cgagcgcgac agcaccaacg ccgacctccg gcttcagctc ggcatcgcgg
     3001 agagcgagct ggccggggcc ctggccgcgg ggggggaggc agcgcgcgcc cgcgcgggcg
     3061 tgaccgccgc cgagagcctg ctcgcgccca tggccgggaa ggcgggcgcg gagcggcgcg
     3121 cccgcctcgc gctggcccgg gcgcgtctgg tcgcggccga gttggacgac cggcagcatc
     3181 tccgcgactc cgcacgcacg gcacgcctgg ccgcgctcga tgcgctggga gatcccgcgg
     3241 gcgacgagct ggagggggtg gatgtccgcg cccgtgcgct ggtcgggctt ggccgacccg
     3301 ccgaggcgga gccgttggtc gctcggctcc ggggctacgg ctaccgcgcc cccggattcc
     3361 cggagctcgc cgcgaagctg aaccagggct cctgacgacc cagctggtgc cgacgatcac
     3421 cccaaccgaa gggttccgcg atgaggaacg tcaccgtgaa gtaccggtcg gaccgcgacg
     3481 aggtagactt cgccccggac aacgggaagc tcgtcatgac ggcgagggac agcatcacct
     3541 tcaagaaggg tggcagcgtt gacttcgact ttgcgagctt cagcctctac cccgaggact
     3601 tgagccagtt tccccgcacg gtgctgcccg accacatcga cgtcgaggac cggttcaccg
     3661 acaaacagga aacgtcctac aagtacaccg tcgtcatcaa gctgcgcgac ggaagctcga
     3721 gggtcgggga tccgcagatc atcaacaagc cgagcggtgt gaccacctag ctcgacgacg
     3781 ctcccgagcc gccggctagc gcacgtggac tggcacggtg attgtcggcg gcggcgtggg
     3841 cggcggcggt gagccgggcg gcggcggggg cgcgggtggt ggcggcattg gcccgaaccg
     3901 gagtgtgagc tcgcccgggg cggccggagt gtactcgaag tcgtagatct cccccgggtc
     3961 gaacatcagg accgctgcac gcgatacggc ttgcgacggc ggcagcgggt atccgtcctt
     4021 cgccaccgcc cgccagttga tgggggcatc gccggcgttc agcgagacca tgagcggcat
     4081 gtcgcccgcc agattgaaca gccggaagcg atagcgcgtg ccggccctga gattcatcgc
     4141 ctccggctgg gctttcccgt tcaggacgaa gtgggggaac gggccgaaga cggggttctg
     4201 ggcggtgccc gcggtcccga agaacaggat cttgtccgtc tcgggatcga accgctgccc
     4261 cggctccagc acgatgatcg gcccgtacag cccgctgccc atctgcatcg cttcgttgaa
     4321 gtgggagtgg tacatgaacg agccggcgcg cggcggcgtc cagcggaccg tgagcgagtc
     4381 gccgggggaa atggacggga ggatggtctg ccccgatccg ctccaccccg gcacgccgtc
     4441 cggatagctc tcgagctcga tgccgtgcca gtggaccgcg gccggctcct gggactggtt
     4501 gacgatcgtg accgccacgc gcttgccccg ctcgagcagg agcatcggcc ccggaatggg
     4561 caacgctgtg ctgtccgccg cgtcgggtgt gccgtccagg acgtacgaca tgccggcctg
     4621 tgatccgtag atgttcggcc gctcgcgctg gacgatccgc agcgcccgcg gggtctccgc
     4681 cgacgccggg ttggctccct tgggcgcgat ggtgatcccc agcacgagcc cgaacatctg
     4741 gtgcgggcgg tcggacatgt gatgatgcag catgccgtcg tccagcacgc cgttctcggt
     4801 gtccagcgcc acgagcttgg agagatgggt ggcgtagtga cagtgataga tccagttccc
     4861 cggccggtcc gccgcccagg agagcgacat ggtgccgaac ggcggcagga tctccgtcac
     4921 gcccatgcgc cgctgctcgg gggcatagag cgagtccgtc aaaccgttgc ccttcgactc
     4981 catccggaag tagaagccgt ggagatgcat ggggtgatcg agctcggtga agttgaccac
     5041 cctccagtgc accgagtcgc cctgcgtgta ggccaatcgc tcggtgtggg gccaggagag
     5101 cccgttgatg gccatggtgc accggctcag tcccgacggg ctcggcggcg cgaccgcgca
     5161 ccaccaggag agcgcgaaga tgcggtcggc cggtcggcgc ggcgcgttcg gcggatccac
     5221 gacgatgacg ccgtgcagct gcatatcctc gaccagacgg atgccaatcg gatcgacgcc
     5281 gcgcttggca tagtagtagt acgtccccgg gacggtcgcc ttgaaacgga gcggcgcggt
     5341 ggcctccggc gggatgatga ccgagtccgg ctgtccccgg atcctgccga agccgaagac
     5401 ggtcagcgcc cggtcgagcc cgtttcggac cgtggcgtgg atctcggtgc cgagcggaac
     5461 ccggatgacc ggtccggggg tggacagtgc cttacccgtt tctccgaagg ccgcgacgtc
     5521 gagcgcccgg ccgctgtcgc cctcgggtcg ccacacgccg gtccgcgcct cgagggcgac
     5581 ggtcaggacg ccgtgtctga gcgtgccgct ggatcggcgg ttgtcgttgg gcacgatgcg
     5641 gtcgtccgcc ggcggcccca gcgcggcagt gagcgtgcca agggacacga gggcggcgta
     5701 cgcgatccat ctcgtcatgg cgacagacct cgcgagcgag gtggcacgtc gagtgcgagc
     5761 ggtggccttg ttcgattgtg agcgggatgc gaactgtaac atgcggcggt gggcagtaac
     5821 tcgctagtcg ggcgaccggg gaagaattgg cgccatgagt gcaagttacg ggaaggcagc
     5881 actttacgag gccggtgggt ccccggtgcc tgagctcctt tcggaatgaa gggctcctca
     5941 tccgtgagac gggaacgcgg atagatttca ccgcactgtc cgcacccgat tggcgggtcg
     6001 ttcggcgttc cgtgaggtgg cgagatgctg ttcgcggcat tcgtgttggc cacgatgact
     6061 ccccccgccc cgtgctccgg caagggcact gcgctctacg tcgacgccac cgagcgtgtc
     6121 ctctggctct gcgactcggg gaaggcggta gaggcgatac cggtggccct cgggagaggc
     6181 ggcctcgaca agcgggtcga gggggacgcc aaggtcccgt tgggcgaata cgccctgggc
     6241 tctcccgtgc cctcgaaggc cttccacctg ttcattccgg tcggctaccc cacgccgagc
     6301 caacgcacca agggcttcac cggcggcgcg atcggggttc acggaccgcc gagggcctac
     6361 ggcggccccg ccagcaccac gatggactgg actctcggct gcatcgccgt cggcacggat
     6421 gctgaaatcg gccgtgtggc gggctggctc cgggcgacca aggcacgccg catcatcatc
     6481 gcggagtaga actccttcag tagccggccg cacttgtcac tgtgcggcgc tctccaggtt
     6541 gccgtgcgag tccgggccgg cccggagcgc gtcggccagc tcgcggtcgt gcccgtagac
     6601 atccgggtag aaccacacgc tgccgtccgc atggaccacg gccgtcgtgt agaagacgag
     6661 caccggcatc accttcttca tcaggacccg ccgggtcg
//
